##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM2449899v1 #!genome-build-accession NCBI_Assembly:GCA_024498995.1 #!annotation-date 06/08/2022 10:25:44 #!annotation-source NCBI ##sequence-region CP098602.1 1 5215155 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=453602 CP098602.1 Genbank region 1 5215155 . + . ID=CP098602.1:1..5215155;Dbxref=taxon:453602;Is_circular=true;Name=ANONYMOUS;collection-date=2022;country=USA: WI;gbkey=Src;genome=chromosome;isolation-source=leaf sample;mol_type=genomic DNA;nat-host=geranium;pathovar=pelargonii;strain=OSU498 CP098602.1 Genbank gene 1249 2391 . - . ID=gene-NDY24_00010;Name=NDY24_00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00010 CP098602.1 Protein Homology CDS 1249 2391 . - 0 ID=cds-UUE98387.1;Parent=gene-NDY24_00010;Dbxref=NCBI_GP:UUE98387.1;Name=UUE98387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452399.1;locus_tag=NDY24_00010;product=efflux RND transporter periplasmic adaptor subunit;protein_id=UUE98387.1;transl_table=11 CP098602.1 Genbank gene 2721 2993 . + . ID=gene-NDY24_00015;Name=NDY24_00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00015 CP098602.1 Protein Homology CDS 2721 2993 . + 0 ID=cds-UUE98388.1;Parent=gene-NDY24_00015;Dbxref=NCBI_GP:UUE98388.1;Name=UUE98388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904780.1;locus_tag=NDY24_00015;product=cytochrome c;protein_id=UUE98388.1;transl_table=11 CP098602.1 Genbank gene 3002 3463 . + . ID=gene-NDY24_00020;Name=NDY24_00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00020 CP098602.1 Protein Homology CDS 3002 3463 . + 0 ID=cds-UUE98389.1;Parent=gene-NDY24_00020;Dbxref=NCBI_GP:UUE98389.1;Name=UUE98389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576685.1;locus_tag=NDY24_00020;product=cytochrome c;protein_id=UUE98389.1;transl_table=11 CP098602.1 Genbank gene 3569 3644 . + . ID=gene-NDY24_00025;Name=NDY24_00025;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_00025 CP098602.1 tRNAscan-SE tRNA 3569 3644 . + . ID=rna-NDY24_00025;Parent=gene-NDY24_00025;anticodon=(pos:3602..3604);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_00025;product=tRNA-Ala CP098602.1 tRNAscan-SE exon 3569 3644 . + . ID=exon-NDY24_00025-1;Parent=rna-NDY24_00025;anticodon=(pos:3602..3604);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_00025;product=tRNA-Ala CP098602.1 Genbank gene 3691 3766 . + . ID=gene-NDY24_00030;Name=NDY24_00030;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_00030 CP098602.1 tRNAscan-SE tRNA 3691 3766 . + . ID=rna-NDY24_00030;Parent=gene-NDY24_00030;anticodon=(pos:3725..3727);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_00030;product=tRNA-Glu CP098602.1 tRNAscan-SE exon 3691 3766 . + . ID=exon-NDY24_00030-1;Parent=rna-NDY24_00030;anticodon=(pos:3725..3727);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_00030;product=tRNA-Glu CP098602.1 Genbank gene 3947 4022 . + . ID=gene-NDY24_00035;Name=NDY24_00035;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_00035 CP098602.1 tRNAscan-SE tRNA 3947 4022 . + . ID=rna-NDY24_00035;Parent=gene-NDY24_00035;anticodon=(pos:3980..3982);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_00035;product=tRNA-Ala CP098602.1 tRNAscan-SE exon 3947 4022 . + . ID=exon-NDY24_00035-1;Parent=rna-NDY24_00035;anticodon=(pos:3980..3982);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_00035;product=tRNA-Ala CP098602.1 Genbank gene 4071 4146 . + . ID=gene-NDY24_00040;Name=NDY24_00040;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_00040 CP098602.1 tRNAscan-SE tRNA 4071 4146 . + . ID=rna-NDY24_00040;Parent=gene-NDY24_00040;anticodon=(pos:4105..4107);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_00040;product=tRNA-Glu CP098602.1 tRNAscan-SE exon 4071 4146 . + . ID=exon-NDY24_00040-1;Parent=rna-NDY24_00040;anticodon=(pos:4105..4107);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_00040;product=tRNA-Glu CP098602.1 Genbank gene 4226 4402 . - . ID=gene-NDY24_00045;Name=NDY24_00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00045 CP098602.1 Protein Homology CDS 4226 4402 . - 0 ID=cds-UUE98390.1;Parent=gene-NDY24_00045;Dbxref=NCBI_GP:UUE98390.1;Name=UUE98390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482805.1;locus_tag=NDY24_00045;product=hypothetical protein;protein_id=UUE98390.1;transl_table=11 CP098602.1 Genbank gene 4764 4850 . - . ID=gene-NDY24_00050;Name=NDY24_00050;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_00050 CP098602.1 tRNAscan-SE tRNA 4764 4850 . - . ID=rna-NDY24_00050;Parent=gene-NDY24_00050;anticodon=(pos:complement(4814..4816));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_00050;product=tRNA-Leu CP098602.1 tRNAscan-SE exon 4764 4850 . - . ID=exon-NDY24_00050-1;Parent=rna-NDY24_00050;anticodon=(pos:complement(4814..4816));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_00050;product=tRNA-Leu CP098602.1 Genbank gene 4990 5370 . + . ID=gene-NDY24_00055;Name=NDY24_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00055 CP098602.1 Protein Homology CDS 4990 5370 . + 0 ID=cds-UUF00519.1;Parent=gene-NDY24_00055;Dbxref=NCBI_GP:UUF00519.1;Name=UUF00519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995422.1;locus_tag=NDY24_00055;product=response regulator;protein_id=UUF00519.1;transl_table=11 CP098602.1 Genbank gene 5572 9357 . + . ID=gene-NDY24_00060;Name=NDY24_00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00060 CP098602.1 Protein Homology CDS 5572 9357 . + 0 ID=cds-UUE98391.1;Parent=gene-NDY24_00060;Dbxref=NCBI_GP:UUE98391.1;Name=UUE98391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802259.1;locus_tag=NDY24_00060;product=PAS domain S-box protein;protein_id=UUE98391.1;transl_table=11 CP098602.1 Genbank gene 9964 12330 . - . ID=gene-NDY24_00065;Name=NDY24_00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00065 CP098602.1 Protein Homology CDS 9964 12330 . - 0 ID=cds-UUE98392.1;Parent=gene-NDY24_00065;Dbxref=NCBI_GP:UUE98392.1;Name=UUE98392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090230.1;locus_tag=NDY24_00065;product=RNA-binding transcriptional accessory protein;protein_id=UUE98392.1;transl_table=11 CP098602.1 Genbank gene 12433 12660 . - . ID=gene-NDY24_00070;Name=NDY24_00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00070 CP098602.1 Protein Homology CDS 12433 12660 . - 0 ID=cds-UUE98393.1;Parent=gene-NDY24_00070;Dbxref=NCBI_GP:UUE98393.1;Name=UUE98393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157548.1;locus_tag=NDY24_00070;product=hypothetical protein;protein_id=UUE98393.1;transl_table=11 CP098602.1 Genbank gene 12854 14065 . + . ID=gene-NDY24_00075;Name=NDY24_00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00075 CP098602.1 Protein Homology CDS 12854 14065 . + 0 ID=cds-UUE98394.1;Parent=gene-NDY24_00075;Dbxref=NCBI_GP:UUE98394.1;Name=UUE98394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347427.1;locus_tag=NDY24_00075;product=FAD-binding oxidoreductase;protein_id=UUE98394.1;transl_table=11 CP098602.1 Genbank gene 14023 14511 . - . ID=gene-NDY24_00080;Name=NDY24_00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00080 CP098602.1 Protein Homology CDS 14023 14511 . - 0 ID=cds-UUE98395.1;Parent=gene-NDY24_00080;Dbxref=NCBI_GP:UUE98395.1;Name=UUE98395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373243.1;locus_tag=NDY24_00080;product=hypothetical protein;protein_id=UUE98395.1;transl_table=11 CP098602.1 Genbank gene 14508 14708 . - . ID=gene-NDY24_00085;Name=NDY24_00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00085 CP098602.1 Protein Homology CDS 14508 14708 . - 0 ID=cds-UUE98396.1;Parent=gene-NDY24_00085;Dbxref=NCBI_GP:UUE98396.1;Name=UUE98396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482814.1;locus_tag=NDY24_00085;product=PspC domain-containing protein;protein_id=UUE98396.1;transl_table=11 CP098602.1 Genbank gene 14823 15899 . - . ID=gene-NDY24_00090;Name=NDY24_00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00090 CP098602.1 Protein Homology CDS 14823 15899 . - 0 ID=cds-UUE98397.1;Parent=gene-NDY24_00090;Dbxref=NCBI_GP:UUE98397.1;Name=UUE98397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301741.1;locus_tag=NDY24_00090;product=class III poly(R)-hydroxyalkanoic acid synthase subunit PhaC;protein_id=UUE98397.1;transl_table=11 CP098602.1 Genbank pseudogene 15896 17064 . - . ID=gene-NDY24_00095;Name=phaE;gbkey=Gene;gene=phaE;gene_biotype=pseudogene;locus_tag=NDY24_00095;pseudo=true CP098602.1 Protein Homology CDS 15896 17064 . - 0 ID=cds-NDY24_00095;Parent=gene-NDY24_00095;Note=frameshifted;gbkey=CDS;gene=phaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373234.1;locus_tag=NDY24_00095;product=class III poly(R)-hydroxyalkanoic acid synthase subunit PhaE;pseudo=true;transl_table=11 CP098602.1 Genbank gene 17120 17734 . - . ID=gene-NDY24_00100;Name=NDY24_00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00100 CP098602.1 Protein Homology CDS 17120 17734 . - 0 ID=cds-UUE98398.1;Parent=gene-NDY24_00100;Dbxref=NCBI_GP:UUE98398.1;Name=UUE98398.1;Ontology_term=GO:0008654,GO:0016780,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904412.1;locus_tag=NDY24_00100;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=UUE98398.1;transl_table=11 CP098602.1 Genbank pseudogene 17868 18630 . + . ID=gene-NDY24_00105;Name=NDY24_00105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_00105;pseudo=true CP098602.1 Protein Homology CDS 17868 18630 . + 0 ID=cds-NDY24_00105;Parent=gene-NDY24_00105;Note=frameshifted;Ontology_term=GO:0003858;gbkey=CDS;go_function=3-hydroxybutyrate dehydrogenase activity|0003858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157555.1;locus_tag=NDY24_00105;product=3-hydroxybutyrate dehydrogenase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 18823 19311 . - . ID=gene-NDY24_00110;Name=NDY24_00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00110 CP098602.1 Protein Homology CDS 18823 19311 . - 0 ID=cds-UUE98399.1;Parent=gene-NDY24_00110;Dbxref=NCBI_GP:UUE98399.1;Name=UUE98399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444982.1;locus_tag=NDY24_00110;product=8-oxo-dGTP diphosphatase;protein_id=UUE98399.1;transl_table=11 CP098602.1 Genbank gene 19410 19913 . - . ID=gene-NDY24_00115;Name=NDY24_00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00115 CP098602.1 Protein Homology CDS 19410 19913 . - 0 ID=cds-UUE98400.1;Parent=gene-NDY24_00115;Dbxref=NCBI_GP:UUE98400.1;Name=UUE98400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301746.1;locus_tag=NDY24_00115;product=DUF1249 domain-containing protein;protein_id=UUE98400.1;transl_table=11 CP098602.1 Genbank gene 20118 20939 . - . ID=gene-NDY24_00120;Name=NDY24_00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00120 CP098602.1 Protein Homology CDS 20118 20939 . - 0 ID=cds-UUE98401.1;Parent=gene-NDY24_00120;Dbxref=NCBI_GP:UUE98401.1;Name=UUE98401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037311.1;locus_tag=NDY24_00120;product=kinase/pyrophosphorylase;protein_id=UUE98401.1;transl_table=11 CP098602.1 Genbank pseudogene 21082 23464 . + . ID=gene-NDY24_00125;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=pseudogene;locus_tag=NDY24_00125;pseudo=true CP098602.1 Protein Homology CDS 21082 23464 . + 0 ID=cds-NDY24_00125;Parent=gene-NDY24_00125;Note=frameshifted;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118687.1;locus_tag=NDY24_00125;product=phosphoenolpyruvate synthase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 23464 24435 . + . ID=gene-NDY24_00130;Name=NDY24_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00130 CP098602.1 Protein Homology CDS 23464 24435 . + 0 ID=cds-UUE98402.1;Parent=gene-NDY24_00130;Dbxref=NCBI_GP:UUE98402.1;Name=UUE98402.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157560.1;locus_tag=NDY24_00130;product=mechanosensitive ion channel;protein_id=UUE98402.1;transl_table=11 CP098602.1 Genbank gene 24628 25212 . - . ID=gene-NDY24_00135;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=NDY24_00135 CP098602.1 Protein Homology CDS 24628 25212 . - 0 ID=cds-UUE98403.1;Parent=gene-NDY24_00135;Dbxref=NCBI_GP:UUE98403.1;Name=UUE98403.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995404.1;locus_tag=NDY24_00135;product=oligoribonuclease;protein_id=UUE98403.1;transl_table=11 CP098602.1 Genbank gene 25283 25780 . - . ID=gene-NDY24_00140;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=NDY24_00140 CP098602.1 Protein Homology CDS 25283 25780 . - 0 ID=cds-UUF00520.1;Parent=gene-NDY24_00140;Dbxref=NCBI_GP:UUF00520.1;Name=UUF00520.1;Ontology_term=GO:0002100,GO:0008251;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450916.1;locus_tag=NDY24_00140;product=tRNA adenosine(34) deaminase TadA;protein_id=UUF00520.1;transl_table=11 CP098602.1 Genbank gene 25795 26262 . - . ID=gene-NDY24_00145;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=NDY24_00145 CP098602.1 Protein Homology CDS 25795 26262 . - 0 ID=cds-UUF00521.1;Parent=gene-NDY24_00145;Dbxref=NCBI_GP:UUF00521.1;Name=UUF00521.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802282.1;locus_tag=NDY24_00145;product=manganese-binding transcriptional regulator MntR;protein_id=UUF00521.1;transl_table=11 CP098602.1 Genbank gene 26475 27755 . + . ID=gene-NDY24_00150;Name=NDY24_00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00150 CP098602.1 Protein Homology CDS 26475 27755 . + 0 ID=cds-UUF00522.1;Parent=gene-NDY24_00150;Dbxref=NCBI_GP:UUF00522.1;Name=UUF00522.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802284.1;locus_tag=NDY24_00150;product=Nramp family divalent metal transporter;protein_id=UUF00522.1;transl_table=11 CP098602.1 Genbank gene 28273 29097 . + . ID=gene-NDY24_00155;Name=NDY24_00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00155 CP098602.1 Protein Homology CDS 28273 29097 . + 0 ID=cds-UUF00523.1;Parent=gene-NDY24_00155;Dbxref=NCBI_GP:UUF00523.1;Name=UUF00523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347416.1;locus_tag=NDY24_00155;product=alpha/beta hydrolase;protein_id=UUF00523.1;transl_table=11 CP098602.1 Genbank gene 29178 29253 . - . ID=gene-NDY24_00160;Name=NDY24_00160;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_00160 CP098602.1 cmsearch ncRNA 29178 29253 . - . ID=rna-NDY24_00160;Parent=gene-NDY24_00160;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_00160;product=sX9 sRNA CP098602.1 cmsearch exon 29178 29253 . - . ID=exon-NDY24_00160-1;Parent=rna-NDY24_00160;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_00160;product=sX9 sRNA CP098602.1 Genbank pseudogene 29343 29569 . - . ID=gene-NDY24_00165;Name=NDY24_00165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_00165;pseudo=true CP098602.1 Protein Homology CDS 29343 29569 . - 0 ID=cds-NDY24_00165;Parent=gene-NDY24_00165;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158234.1;locus_tag=NDY24_00165;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 29800 29959 . - . ID=gene-NDY24_00170;Name=NDY24_00170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_00170;pseudo=true CP098602.1 Protein Homology CDS 29800 29959 . - 0 ID=cds-NDY24_00170;Parent=gene-NDY24_00170;Note=frameshifted;Ontology_term=GO:0008150,GO:0003674,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008577142.1;locus_tag=NDY24_00170;product=XapX domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 29956 30186 . - . ID=gene-NDY24_00175;Name=NDY24_00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00175 CP098602.1 Protein Homology CDS 29956 30186 . - 0 ID=cds-UUF00232.1;Parent=gene-NDY24_00175;Dbxref=NCBI_GP:UUF00232.1;Name=UUF00232.1;Ontology_term=GO:0008150,GO:0003674,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922653.1;locus_tag=NDY24_00175;product=XapX domain-containing protein;protein_id=UUF00232.1;transl_table=11 CP098602.1 Genbank gene 30192 31820 . - . ID=gene-NDY24_00180;Name=NDY24_00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00180 CP098602.1 Protein Homology CDS 30192 31820 . - 0 ID=cds-UUE98404.1;Parent=gene-NDY24_00180;Dbxref=NCBI_GP:UUE98404.1;Name=UUE98404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007963472.1;locus_tag=NDY24_00180;product=MFS transporter;protein_id=UUE98404.1;transl_table=11 CP098602.1 Genbank gene 31903 33744 . - . ID=gene-NDY24_00185;Name=NDY24_00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00185 CP098602.1 Protein Homology CDS 31903 33744 . - 0 ID=cds-UUF00233.1;Parent=gene-NDY24_00185;Dbxref=NCBI_GP:UUF00233.1;Name=UUF00233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090280.1;locus_tag=NDY24_00185;product=amidohydrolase;protein_id=UUF00233.1;transl_table=11 CP098602.1 Genbank gene 33870 34307 . - . ID=gene-NDY24_00190;Name=NDY24_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00190 CP098602.1 Protein Homology CDS 33870 34307 . - 0 ID=cds-UUE98405.1;Parent=gene-NDY24_00190;Dbxref=NCBI_GP:UUE98405.1;Name=UUE98405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161653.1;locus_tag=NDY24_00190;product=DoxX family protein;protein_id=UUE98405.1;transl_table=11 CP098602.1 Genbank gene 34304 34960 . - . ID=gene-NDY24_00195;Name=NDY24_00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00195 CP098602.1 Protein Homology CDS 34304 34960 . - 0 ID=cds-UUE98406.1;Parent=gene-NDY24_00195;Dbxref=NCBI_GP:UUE98406.1;Name=UUE98406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157571.1;locus_tag=NDY24_00195;product=hydrolase;protein_id=UUE98406.1;transl_table=11 CP098602.1 Genbank gene 34957 35337 . - . ID=gene-NDY24_00200;Name=NDY24_00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00200 CP098602.1 Protein Homology CDS 34957 35337 . - 0 ID=cds-UUF00234.1;Parent=gene-NDY24_00200;Dbxref=NCBI_GP:UUF00234.1;Name=UUF00234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373197.1;locus_tag=NDY24_00200;product=helix-turn-helix transcriptional regulator;protein_id=UUF00234.1;transl_table=11 CP098602.1 Genbank pseudogene 35774 38868 . + . ID=gene-NDY24_00205;Name=NDY24_00205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_00205;pseudo=true CP098602.1 Protein Homology CDS 35774 38868 . + 0 ID=cds-NDY24_00205;Parent=gene-NDY24_00205;Note=frameshifted;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007963462.1;locus_tag=NDY24_00205;product=histidine kinase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 38861 39502 . + . ID=gene-NDY24_00210;Name=NDY24_00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00210 CP098602.1 Protein Homology CDS 38861 39502 . + 0 ID=cds-UUE98407.1;Parent=gene-NDY24_00210;Dbxref=NCBI_GP:UUE98407.1;Name=UUE98407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922658.1;locus_tag=NDY24_00210;product=response regulator transcription factor;protein_id=UUE98407.1;transl_table=11 CP098602.1 Genbank pseudogene 39708 40836 . + . ID=gene-NDY24_00215;Name=NDY24_00215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_00215;pseudo=true CP098602.1 Protein Homology CDS 39708 40836 . + 0 ID=cds-NDY24_00215;Parent=gene-NDY24_00215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347407.1;locus_tag=NDY24_00215;product=Cache 3/Cache 2 fusion domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 40881 41507 . + . ID=gene-NDY24_00220;Name=NDY24_00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00220 CP098602.1 Protein Homology CDS 40881 41507 . + 0 ID=cds-UUE98408.1;Parent=gene-NDY24_00220;Dbxref=NCBI_GP:UUE98408.1;Name=UUE98408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157575.1;locus_tag=NDY24_00220;product=hypothetical protein;protein_id=UUE98408.1;transl_table=11 CP098602.1 Genbank gene 41597 42673 . - . ID=gene-NDY24_00225;Name=NDY24_00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00225 CP098602.1 Protein Homology CDS 41597 42673 . - 0 ID=cds-UUE98409.1;Parent=gene-NDY24_00225;Dbxref=NCBI_GP:UUE98409.1;Name=UUE98409.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=NDY24_00225;product=LysR family transcriptional regulator;protein_id=UUE98409.1;transl_table=11 CP098602.1 Genbank gene 42667 42828 . + . ID=gene-NDY24_00230;Name=NDY24_00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00230 CP098602.1 GeneMarkS-2+ CDS 42667 42828 . + 0 ID=cds-UUE98410.1;Parent=gene-NDY24_00230;Dbxref=NCBI_GP:UUE98410.1;Name=UUE98410.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_00230;product=hypothetical protein;protein_id=UUE98410.1;transl_table=11 CP098602.1 Genbank gene 42871 43677 . + . ID=gene-NDY24_00235;Name=NDY24_00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00235 CP098602.1 Protein Homology CDS 42871 43677 . + 0 ID=cds-UUE98411.1;Parent=gene-NDY24_00235;Dbxref=NCBI_GP:UUE98411.1;Name=UUE98411.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002801519.1;locus_tag=NDY24_00235;product=IS5 family transposase;protein_id=UUE98411.1;transl_table=11 CP098602.1 Genbank gene 43729 44873 . + . ID=gene-NDY24_00240;Name=NDY24_00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00240 CP098602.1 Protein Homology CDS 43729 43966 . + 0 ID=cds-UUE98412.1;Parent=gene-NDY24_00240;Dbxref=NCBI_GP:UUE98412.1;Name=UUE98412.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=NDY24_00240;product=IS3 family transposase;protein_id=UUE98412.1;transl_table=11 CP098602.1 Protein Homology CDS 43966 44873 . + 2 ID=cds-UUE98412.1;Parent=gene-NDY24_00240;Dbxref=NCBI_GP:UUE98412.1;Name=UUE98412.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=NDY24_00240;product=IS3 family transposase;protein_id=UUE98412.1;transl_table=11 CP098602.1 Genbank pseudogene 44900 45698 . - . ID=gene-NDY24_00245;Name=NDY24_00245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_00245;pseudo=true CP098602.1 Protein Homology CDS 44900 45698 . - 0 ID=cds-NDY24_00245;Parent=gene-NDY24_00245;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155801.1;locus_tag=NDY24_00245;product=integrase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 45782 45871 . - . ID=gene-NDY24_00250;Name=NDY24_00250;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_00250 CP098602.1 tRNAscan-SE tRNA 45782 45871 . - . ID=rna-NDY24_00250;Parent=gene-NDY24_00250;anticodon=(pos:complement(45835..45837));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_00250;product=tRNA-Ser CP098602.1 tRNAscan-SE exon 45782 45871 . - . ID=exon-NDY24_00250-1;Parent=rna-NDY24_00250;anticodon=(pos:complement(45835..45837));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_00250;product=tRNA-Ser CP098602.1 Genbank gene 46233 47249 . - . ID=gene-NDY24_00255;Name=NDY24_00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00255 CP098602.1 Protein Homology CDS 46233 47249 . - 0 ID=cds-UUE98413.1;Parent=gene-NDY24_00255;Dbxref=NCBI_GP:UUE98413.1;Name=UUE98413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964080.1;locus_tag=NDY24_00255;product=LysR family transcriptional regulator;protein_id=UUE98413.1;transl_table=11 CP098602.1 Genbank pseudogene 47737 49087 . - . ID=gene-NDY24_00260;Name=serS;gbkey=Gene;gene=serS;gene_biotype=pseudogene;locus_tag=NDY24_00260;pseudo=true CP098602.1 Protein Homology CDS 47737 49087 . - 0 ID=cds-NDY24_00260;Parent=gene-NDY24_00260;Note=frameshifted;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005991172.1;locus_tag=NDY24_00260;product=serine--tRNA ligase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 49201 49866 . + . ID=gene-NDY24_00265;Name=NDY24_00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00265 CP098602.1 Protein Homology CDS 49201 49866 . + 0 ID=cds-UUE98414.1;Parent=gene-NDY24_00265;Dbxref=NCBI_GP:UUE98414.1;Name=UUE98414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089877.1;locus_tag=NDY24_00265;product=energy transducer TonB;protein_id=UUE98414.1;transl_table=11 CP098602.1 Genbank gene 50228 50695 . + . ID=gene-NDY24_00270;Name=NDY24_00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00270 CP098602.1 Protein Homology CDS 50228 50695 . + 0 ID=cds-UUF00235.1;Parent=gene-NDY24_00270;Dbxref=NCBI_GP:UUF00235.1;Name=UUF00235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158182.1;locus_tag=NDY24_00270;product=energy transducer TonB;protein_id=UUF00235.1;transl_table=11 CP098602.1 Genbank gene 50679 51995 . - . ID=gene-NDY24_00275;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=NDY24_00275 CP098602.1 Protein Homology CDS 50679 51995 . - 0 ID=cds-UUE98415.1;Parent=gene-NDY24_00275;Dbxref=NCBI_GP:UUE98415.1;Name=UUE98415.1;Ontology_term=GO:0009423,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451089.1;locus_tag=NDY24_00275;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=UUE98415.1;transl_table=11 CP098602.1 Genbank gene 52118 53317 . - . ID=gene-NDY24_00280;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=NDY24_00280 CP098602.1 Protein Homology CDS 52118 53317 . - 0 ID=cds-UUE98416.1;Parent=gene-NDY24_00280;Dbxref=NCBI_GP:UUE98416.1;Name=UUE98416.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;gene=pheA;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300926.1;locus_tag=NDY24_00280;product=prephenate dehydratase;protein_id=UUE98416.1;transl_table=11 CP098602.1 Genbank gene 53384 54469 . - . ID=gene-NDY24_00285;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=NDY24_00285 CP098602.1 Protein Homology CDS 53384 54469 . - 0 ID=cds-UUE98417.1;Parent=gene-NDY24_00285;Dbxref=NCBI_GP:UUE98417.1;Name=UUE98417.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300927.1;locus_tag=NDY24_00285;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=UUE98417.1;transl_table=11 CP098602.1 Genbank gene 54649 55617 . + . ID=gene-NDY24_00290;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=NDY24_00290 CP098602.1 Protein Homology CDS 54649 55617 . + 0 ID=cds-UUE98418.1;Parent=gene-NDY24_00290;Dbxref=NCBI_GP:UUE98418.1;Name=UUE98418.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914864.1;locus_tag=NDY24_00290;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=UUE98418.1;transl_table=11 CP098602.1 Genbank gene 55759 56415 . + . ID=gene-NDY24_00295;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=NDY24_00295 CP098602.1 Protein Homology CDS 55759 56415 . + 0 ID=cds-UUE98419.1;Parent=gene-NDY24_00295;Dbxref=NCBI_GP:UUE98419.1;Name=UUE98419.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036769.1;locus_tag=NDY24_00295;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=UUE98419.1;transl_table=11 CP098602.1 Genbank gene 56357 57166 . - . ID=gene-NDY24_00300;Name=NDY24_00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00300 CP098602.1 Protein Homology CDS 56357 57166 . - 0 ID=cds-UUE98420.1;Parent=gene-NDY24_00300;Dbxref=NCBI_GP:UUE98420.1;Name=UUE98420.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904651.1;locus_tag=NDY24_00300;product=FHA domain-containing protein;protein_id=UUE98420.1;transl_table=11 CP098602.1 Genbank gene 57338 57613 . + . ID=gene-NDY24_00305;Name=NDY24_00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00305 CP098602.1 Protein Homology CDS 57338 57613 . + 0 ID=cds-UUE98421.1;Parent=gene-NDY24_00305;Dbxref=NCBI_GP:UUE98421.1;Name=UUE98421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503751.1;locus_tag=NDY24_00305;product=polyhydroxyalkanoic acid system family protein;protein_id=UUE98421.1;transl_table=11 CP098602.1 Genbank gene 57865 58425 . + . ID=gene-NDY24_00310;Name=NDY24_00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00310 CP098602.1 Protein Homology CDS 57865 58425 . + 0 ID=cds-UUE98422.1;Parent=gene-NDY24_00310;Dbxref=NCBI_GP:UUE98422.1;Name=UUE98422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158174.1;locus_tag=NDY24_00310;product=phasin family protein;protein_id=UUE98422.1;transl_table=11 CP098602.1 Genbank pseudogene 58661 59666 . + . ID=gene-NDY24_00315;Name=NDY24_00315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_00315;pseudo=true CP098602.1 Protein Homology CDS 58661 59666 . + 0 ID=cds-NDY24_00315;Parent=gene-NDY24_00315;Note=frameshifted;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347042.1;locus_tag=NDY24_00315;product=restriction endonuclease;pseudo=true;transl_table=11 CP098602.1 Genbank gene 59703 60440 . - . ID=gene-NDY24_00320;Name=hutC;gbkey=Gene;gene=hutC;gene_biotype=protein_coding;locus_tag=NDY24_00320 CP098602.1 Protein Homology CDS 59703 60440 . - 0 ID=cds-UUE98423.1;Parent=gene-NDY24_00320;Dbxref=NCBI_GP:UUE98423.1;Name=UUE98423.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hutC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451099.1;locus_tag=NDY24_00320;product=histidine utilization repressor;protein_id=UUE98423.1;transl_table=11 CP098602.1 Genbank pseudogene 60481 61855 . - . ID=gene-NDY24_00325;Name=NDY24_00325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_00325;pseudo=true CP098602.1 Protein Homology CDS 60481 61855 . - 0 ID=cds-NDY24_00325;Parent=gene-NDY24_00325;Note=frameshifted;Ontology_term=GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451100.1;locus_tag=NDY24_00325;product=formimidoylglutamate deiminase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 61916 63121 . + . ID=gene-NDY24_00330;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=NDY24_00330 CP098602.1 Protein Homology CDS 61916 63121 . + 0 ID=cds-UUE98424.1;Parent=gene-NDY24_00330;Dbxref=NCBI_GP:UUE98424.1;Name=UUE98424.1;Ontology_term=GO:0006548,GO:0050480;gbkey=CDS;gene=hutI;go_function=imidazolonepropionase activity|0050480||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158169.1;locus_tag=NDY24_00330;product=imidazolonepropionase;protein_id=UUE98424.1;transl_table=11 CP098602.1 Genbank pseudogene 63090 64674 . + . ID=gene-NDY24_00335;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=pseudogene;locus_tag=NDY24_00335;pseudo=true CP098602.1 Protein Homology CDS 63090 64674 . + 0 ID=cds-NDY24_00335;Parent=gene-NDY24_00335;Note=frameshifted;Ontology_term=GO:0006548,GO:0004397;gbkey=CDS;gene=hutH;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451102.1;locus_tag=NDY24_00335;product=histidine ammonia-lyase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 64748 65608 . + . ID=gene-NDY24_00340;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=NDY24_00340 CP098602.1 Protein Homology CDS 64748 65608 . + 0 ID=cds-UUE98425.1;Parent=gene-NDY24_00340;Dbxref=NCBI_GP:UUE98425.1;Name=UUE98425.1;Ontology_term=GO:0019557,GO:0050129;gbkey=CDS;gene=hutG;go_function=N-formylglutamate deformylase activity|0050129||IEA;go_process=histidine catabolic process to glutamate and formate|0019557||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408588.1;locus_tag=NDY24_00340;product=N-formylglutamate deformylase;protein_id=UUE98425.1;transl_table=11 CP098602.1 Genbank gene 65625 67292 . + . ID=gene-NDY24_00345;Name=NDY24_00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00345 CP098602.1 Protein Homology CDS 65625 67292 . + 0 ID=cds-UUE98426.1;Parent=gene-NDY24_00345;Dbxref=NCBI_GP:UUE98426.1;Name=UUE98426.1;Ontology_term=GO:0016153;gbkey=CDS;go_function=urocanate hydratase activity|0016153||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165198.1;locus_tag=NDY24_00345;product=urocanate hydratase;protein_id=UUE98426.1;transl_table=11 CP098602.1 Genbank pseudogene 67997 69144 . + . ID=gene-NDY24_00350;Name=NDY24_00350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_00350;pseudo=true CP098602.1 Protein Homology CDS 67997 69144 . + 0 ID=cds-NDY24_00350;Parent=gene-NDY24_00350;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=NDY24_00350;product=IS3 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 69198 70160 . - . ID=gene-NDY24_00355;Name=NDY24_00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00355 CP098602.1 Protein Homology CDS 69198 70160 . - 0 ID=cds-UUE98427.1;Parent=gene-NDY24_00355;Dbxref=NCBI_GP:UUE98427.1;Name=UUE98427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012510746.1;locus_tag=NDY24_00355;product=hypothetical protein;protein_id=UUE98427.1;transl_table=11 CP098602.1 Genbank gene 70500 71225 . + . ID=gene-NDY24_00360;Name=NDY24_00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00360 CP098602.1 Protein Homology CDS 70500 71225 . + 0 ID=cds-UUE98428.1;Parent=gene-NDY24_00360;Dbxref=NCBI_GP:UUE98428.1;Name=UUE98428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451499.1;locus_tag=NDY24_00360;product=hypothetical protein;protein_id=UUE98428.1;transl_table=11 CP098602.1 Genbank pseudogene 71484 73959 . - . ID=gene-NDY24_00365;Name=NDY24_00365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_00365;pseudo=true CP098602.1 Protein Homology CDS 71484 73959 . - 0 ID=cds-NDY24_00365;Parent=gene-NDY24_00365;Note=frameshifted;Ontology_term=GO:0016491,GO:0048038,GO:0016021,GO:0030288;gbkey=CDS;go_component=integral component of membrane|0016021||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=oxidoreductase activity|0016491||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113395.1;locus_tag=NDY24_00365;product=membrane-bound PQQ-dependent dehydrogenase%2C glucose/quinate/shikimate family;pseudo=true;transl_table=11 CP098602.1 Genbank gene 74157 76868 . - . ID=gene-NDY24_00370;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=NDY24_00370 CP098602.1 Protein Homology CDS 74157 76868 . - 0 ID=cds-UUE98429.1;Parent=gene-NDY24_00370;Dbxref=NCBI_GP:UUE98429.1;Name=UUE98429.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158164.1;locus_tag=NDY24_00370;product=DNA gyrase subunit A;protein_id=UUE98429.1;transl_table=11 CP098602.1 Genbank gene 77079 78143 . - . ID=gene-NDY24_00375;Name=mtnA;gbkey=Gene;gene=mtnA;gene_biotype=protein_coding;locus_tag=NDY24_00375 CP098602.1 Protein Homology CDS 77079 78143 . - 0 ID=cds-UUE98430.1;Parent=gene-NDY24_00375;Dbxref=NCBI_GP:UUE98430.1;Name=UUE98430.1;Ontology_term=GO:0019509,GO:0046523;gbkey=CDS;gene=mtnA;go_function=S-methyl-5-thioribose-1-phosphate isomerase activity|0046523||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051043.1;locus_tag=NDY24_00375;product=S-methyl-5-thioribose-1-phosphate isomerase;protein_id=UUE98430.1;transl_table=11 CP098602.1 Genbank gene 79044 79730 . - . ID=gene-NDY24_00380;Name=NDY24_00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00380 CP098602.1 Protein Homology CDS 79044 79730 . - 0 ID=cds-UUE98431.1;Parent=gene-NDY24_00380;Dbxref=NCBI_GP:UUE98431.1;Name=UUE98431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089862.1;locus_tag=NDY24_00380;product=DUF3011 domain-containing protein;protein_id=UUE98431.1;transl_table=11 CP098602.1 Genbank gene 79900 80862 . - . ID=gene-NDY24_00385;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=NDY24_00385 CP098602.1 Protein Homology CDS 79900 80862 . - 0 ID=cds-UUE98432.1;Parent=gene-NDY24_00385;Dbxref=NCBI_GP:UUE98432.1;Name=UUE98432.1;Ontology_term=GO:0006430,GO:0000166,GO:0004824,GO:0005524;gbkey=CDS;gene=epmA;go_function=nucleotide binding|0000166||IEA,lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158162.1;locus_tag=NDY24_00385;product=EF-P lysine aminoacylase EpmA;protein_id=UUE98432.1;transl_table=11 CP098602.1 Genbank gene 80859 83360 . - . ID=gene-NDY24_00390;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=NDY24_00390 CP098602.1 Protein Homology CDS 80859 83360 . - 0 ID=cds-UUE98433.1;Parent=gene-NDY24_00390;Dbxref=NCBI_GP:UUE98433.1;Name=UUE98433.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300671.1;locus_tag=NDY24_00390;product=NAD-dependent DNA ligase LigA;protein_id=UUE98433.1;transl_table=11 CP098602.1 Genbank gene 83552 84676 . + . ID=gene-NDY24_00395;Name=NDY24_00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00395 CP098602.1 Protein Homology CDS 83552 84676 . + 0 ID=cds-UUE98434.1;Parent=gene-NDY24_00395;Dbxref=NCBI_GP:UUE98434.1;Name=UUE98434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159896.1;locus_tag=NDY24_00395;product=pyridoxal phosphate-dependent aminotransferase;protein_id=UUE98434.1;transl_table=11 CP098602.1 Genbank gene 85003 85734 . - . ID=gene-NDY24_00400;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=NDY24_00400 CP098602.1 Protein Homology CDS 85003 85734 . - 0 ID=cds-UUE98435.1;Parent=gene-NDY24_00400;Dbxref=NCBI_GP:UUE98435.1;Name=UUE98435.1;Ontology_term=GO:0000917,GO:0005515;gbkey=CDS;gene=zipA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903841.1;locus_tag=NDY24_00400;product=cell division protein ZipA;protein_id=UUE98435.1;transl_table=11 CP098602.1 Genbank gene 85791 89294 . - . ID=gene-NDY24_00405;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=NDY24_00405 CP098602.1 Protein Homology CDS 85791 89294 . - 0 ID=cds-UUE98436.1;Parent=gene-NDY24_00405;Dbxref=NCBI_GP:UUE98436.1;Name=UUE98436.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451583.1;locus_tag=NDY24_00405;product=chromosome segregation protein SMC;protein_id=UUE98436.1;transl_table=11 CP098602.1 Genbank gene 89504 89953 . - . ID=gene-NDY24_00410;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=NDY24_00410 CP098602.1 Protein Homology CDS 89504 89953 . - 0 ID=cds-UUE98437.1;Parent=gene-NDY24_00410;Dbxref=NCBI_GP:UUE98437.1;Name=UUE98437.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379584.1;locus_tag=NDY24_00410;product=50S ribosomal protein L9;protein_id=UUE98437.1;transl_table=11 CP098602.1 Genbank gene 90224 90454 . - . ID=gene-NDY24_00415;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=NDY24_00415 CP098602.1 Protein Homology CDS 90224 90454 . - 0 ID=cds-UUE98438.1;Parent=gene-NDY24_00415;Dbxref=NCBI_GP:UUE98438.1;Name=UUE98438.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804494.1;locus_tag=NDY24_00415;product=30S ribosomal protein S18;protein_id=UUE98438.1;transl_table=11 CP098602.1 Genbank gene 90466 90900 . - . ID=gene-NDY24_00420;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=NDY24_00420 CP098602.1 Protein Homology CDS 90466 90900 . - 0 ID=cds-UUE98439.1;Parent=gene-NDY24_00420;Dbxref=NCBI_GP:UUE98439.1;Name=UUE98439.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005991245.1;locus_tag=NDY24_00420;product=30S ribosomal protein S6;protein_id=UUE98439.1;transl_table=11 CP098602.1 Genbank gene 91231 91569 . - . ID=gene-NDY24_00425;Name=NDY24_00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00425 CP098602.1 Protein Homology CDS 91231 91569 . - 0 ID=cds-UUE98440.1;Parent=gene-NDY24_00425;Dbxref=NCBI_GP:UUE98440.1;Name=UUE98440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966300.1;locus_tag=NDY24_00425;product=iron-sulfur cluster assembly accessory protein;protein_id=UUE98440.1;transl_table=11 CP098602.1 Genbank gene 91777 93171 . + . ID=gene-NDY24_00430;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=NDY24_00430 CP098602.1 Protein Homology CDS 91777 93171 . + 0 ID=cds-UUE98441.1;Parent=gene-NDY24_00430;Dbxref=NCBI_GP:UUE98441.1;Name=UUE98441.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237793.1;locus_tag=NDY24_00430;product=asparagine--tRNA ligase;protein_id=UUE98441.1;transl_table=11 CP098602.1 Genbank gene 93289 93594 . + . ID=gene-NDY24_00435;Name=NDY24_00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00435 CP098602.1 Protein Homology CDS 93289 93594 . + 0 ID=cds-UUE98442.1;Parent=gene-NDY24_00435;Dbxref=NCBI_GP:UUE98442.1;Name=UUE98442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158153.1;locus_tag=NDY24_00435;product=hypothetical protein;protein_id=UUE98442.1;transl_table=11 CP098602.1 Genbank gene 93591 93917 . + . ID=gene-NDY24_00440;Name=NDY24_00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00440 CP098602.1 Protein Homology CDS 93591 93917 . + 0 ID=cds-UUE98443.1;Parent=gene-NDY24_00440;Dbxref=NCBI_GP:UUE98443.1;Name=UUE98443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158152.1;locus_tag=NDY24_00440;product=hypothetical protein;protein_id=UUE98443.1;transl_table=11 CP098602.1 Genbank gene 93919 94557 . + . ID=gene-NDY24_00445;Name=NDY24_00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00445 CP098602.1 Protein Homology CDS 93919 94557 . + 0 ID=cds-UUE98444.1;Parent=gene-NDY24_00445;Dbxref=NCBI_GP:UUE98444.1;Name=UUE98444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379580.1;locus_tag=NDY24_00445;product=FMN-binding negative transcriptional regulator;protein_id=UUE98444.1;transl_table=11 CP098602.1 Genbank pseudogene 94649 95312 . + . ID=gene-NDY24_00450;Name=can;gbkey=Gene;gene=can;gene_biotype=pseudogene;locus_tag=NDY24_00450;pseudo=true CP098602.1 Protein Homology CDS 94649 95312 . + 0 ID=cds-NDY24_00450;Parent=gene-NDY24_00450;Note=frameshifted;Ontology_term=GO:0015976,GO:0004089;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902447.1;locus_tag=NDY24_00450;product=carbonate dehydratase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 95397 95927 . + . ID=gene-NDY24_00455;Name=NDY24_00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00455 CP098602.1 Protein Homology CDS 95397 95927 . + 0 ID=cds-UUE98445.1;Parent=gene-NDY24_00455;Dbxref=NCBI_GP:UUE98445.1;Name=UUE98445.1;Ontology_term=GO:0000334,GO:0005506;gbkey=CDS;go_function=3-hydroxyanthranilate 3%2C4-dioxygenase activity|0000334||IEA,iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036739.1;locus_tag=NDY24_00455;product=3-hydroxyanthranilate 3%2C4-dioxygenase;protein_id=UUE98445.1;transl_table=11 CP098602.1 Genbank pseudogene 96146 98288 . + . ID=gene-NDY24_00460;Name=NDY24_00460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_00460;pseudo=true CP098602.1 Protein Homology CDS 96146 98288 . + 0 ID=cds-NDY24_00460;Parent=gene-NDY24_00460;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113390.1;locus_tag=NDY24_00460;product=FUSC family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 98324 99595 . + . ID=gene-NDY24_00465;Name=kynU;gbkey=Gene;gene=kynU;gene_biotype=protein_coding;locus_tag=NDY24_00465 CP098602.1 Protein Homology CDS 98324 99595 . + 0 ID=cds-UUE98446.1;Parent=gene-NDY24_00465;Dbxref=NCBI_GP:UUE98446.1;Name=UUE98446.1;Ontology_term=GO:0019441,GO:0030429;gbkey=CDS;gene=kynU;go_function=kynureninase activity|0030429||IEA;go_process=tryptophan catabolic process to kynurenine|0019441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966269.1;locus_tag=NDY24_00465;product=kynureninase;protein_id=UUE98446.1;transl_table=11 CP098602.1 Genbank gene 99767 101134 . + . ID=gene-NDY24_00470;Name=NDY24_00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00470 CP098602.1 Protein Homology CDS 99767 101134 . + 0 ID=cds-UUE98447.1;Parent=gene-NDY24_00470;Dbxref=NCBI_GP:UUE98447.1;Name=UUE98447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576314.1;locus_tag=NDY24_00470;product=FAD-dependent monooxygenase;protein_id=UUE98447.1;transl_table=11 CP098602.1 Genbank gene 101241 102686 . + . ID=gene-NDY24_00475;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=NDY24_00475 CP098602.1 Protein Homology CDS 101241 102686 . + 0 ID=cds-UUE98448.1;Parent=gene-NDY24_00475;Dbxref=NCBI_GP:UUE98448.1;Name=UUE98448.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008852;gbkey=CDS;gene=sbcB;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,exodeoxyribonuclease I activity|0008852||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366550.1;locus_tag=NDY24_00475;product=exodeoxyribonuclease I;protein_id=UUE98448.1;transl_table=11 CP098602.1 Genbank gene 102683 103369 . + . ID=gene-NDY24_00480;Name=NDY24_00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00480 CP098602.1 Protein Homology CDS 102683 103369 . + 0 ID=cds-UUE98449.1;Parent=gene-NDY24_00480;Dbxref=NCBI_GP:UUE98449.1;Name=UUE98449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005996685.1;locus_tag=NDY24_00480;product=DUF2461 domain-containing protein;protein_id=UUE98449.1;transl_table=11 CP098602.1 Genbank gene 103494 104060 . + . ID=gene-NDY24_00485;Name=NDY24_00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00485 CP098602.1 Protein Homology CDS 103494 104060 . + 0 ID=cds-UUE98450.1;Parent=gene-NDY24_00485;Dbxref=NCBI_GP:UUE98450.1;Name=UUE98450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804466.1;locus_tag=NDY24_00485;product=DUF2939 domain-containing protein;protein_id=UUE98450.1;transl_table=11 CP098602.1 Genbank gene 104141 104884 . - . ID=gene-NDY24_00490;Name=NDY24_00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00490 CP098602.1 Protein Homology CDS 104141 104884 . - 0 ID=cds-UUE98451.1;Parent=gene-NDY24_00490;Dbxref=NCBI_GP:UUE98451.1;Name=UUE98451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902455.1;locus_tag=NDY24_00490;product=transferase;protein_id=UUE98451.1;transl_table=11 CP098602.1 Genbank gene 104881 105846 . - . ID=gene-NDY24_00495;Name=NDY24_00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00495 CP098602.1 Protein Homology CDS 104881 105846 . - 0 ID=cds-UUE98452.1;Parent=gene-NDY24_00495;Dbxref=NCBI_GP:UUE98452.1;Name=UUE98452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450285.1;locus_tag=NDY24_00495;product=5'-nucleotidase;protein_id=UUE98452.1;transl_table=11 CP098602.1 Genbank gene 106090 106866 . - . ID=gene-NDY24_00500;Name=NDY24_00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00500 CP098602.1 Protein Homology CDS 106090 106866 . - 0 ID=cds-UUE98453.1;Parent=gene-NDY24_00500;Dbxref=NCBI_GP:UUE98453.1;Name=UUE98453.1;Ontology_term=GO:0006741,GO:0019674,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP biosynthetic process|0006741||IEA,NAD metabolic process|0019674||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005919766.1;locus_tag=NDY24_00500;product=NAD kinase;protein_id=UUE98453.1;transl_table=11 CP098602.1 Genbank gene 107073 109208 . - . ID=gene-NDY24_00505;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=NDY24_00505 CP098602.1 Protein Homology CDS 107073 109208 . - 0 ID=cds-UUE98454.1;Parent=gene-NDY24_00505;Dbxref=NCBI_GP:UUE98454.1;Name=UUE98454.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902459.1;locus_tag=NDY24_00505;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=UUE98454.1;transl_table=11 CP098602.1 Genbank gene 109205 109396 . - . ID=gene-NDY24_00510;Name=NDY24_00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00510 CP098602.1 Protein Homology CDS 109205 109396 . - 0 ID=cds-UUE98455.1;Parent=gene-NDY24_00510;Dbxref=NCBI_GP:UUE98455.1;Name=UUE98455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155866.1;locus_tag=NDY24_00510;product=hypothetical protein;protein_id=UUE98455.1;transl_table=11 CP098602.1 Genbank gene 109375 110988 . - . ID=gene-NDY24_00515;Name=NDY24_00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00515 CP098602.1 Protein Homology CDS 109375 110988 . - 0 ID=cds-UUE98456.1;Parent=gene-NDY24_00515;Dbxref=NCBI_GP:UUE98456.1;Name=UUE98456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160314.1;locus_tag=NDY24_00515;product=ATP-binding cassette domain-containing protein;protein_id=UUE98456.1;transl_table=11 CP098602.1 Genbank gene 111172 112128 . - . ID=gene-NDY24_00520;Name=NDY24_00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00520 CP098602.1 Protein Homology CDS 111172 112128 . - 0 ID=cds-UUE98457.1;Parent=gene-NDY24_00520;Dbxref=NCBI_GP:UUE98457.1;Name=UUE98457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507379.1;locus_tag=NDY24_00520;product=SAM-dependent methyltransferase;protein_id=UUE98457.1;transl_table=11 CP098602.1 Genbank gene 112274 112780 . - . ID=gene-NDY24_00525;Name=NDY24_00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00525 CP098602.1 Protein Homology CDS 112274 112780 . - 0 ID=cds-UUE98458.1;Parent=gene-NDY24_00525;Dbxref=NCBI_GP:UUE98458.1;Name=UUE98458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004429248.1;locus_tag=NDY24_00525;product=N-acetyltransferase;protein_id=UUE98458.1;transl_table=11 CP098602.1 Genbank gene 112821 113348 . - . ID=gene-NDY24_00530;Name=NDY24_00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00530 CP098602.1 Protein Homology CDS 112821 113348 . - 0 ID=cds-UUE98459.1;Parent=gene-NDY24_00530;Dbxref=NCBI_GP:UUE98459.1;Name=UUE98459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966252.1;locus_tag=NDY24_00530;product=hypothetical protein;protein_id=UUE98459.1;transl_table=11 CP098602.1 Genbank gene 113345 113836 . - . ID=gene-NDY24_00535;Name=NDY24_00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00535 CP098602.1 Protein Homology CDS 113345 113836 . - 0 ID=cds-UUE98460.1;Parent=gene-NDY24_00535;Dbxref=NCBI_GP:UUE98460.1;Name=UUE98460.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089837.1;locus_tag=NDY24_00535;product=MOSC domain-containing protein;protein_id=UUE98460.1;transl_table=11 CP098602.1 Genbank pseudogene 113860 114432 . + . ID=gene-NDY24_00540;Name=NDY24_00540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_00540;pseudo=true CP098602.1 Protein Homology CDS 113860 114432 . + 0 ID=cds-NDY24_00540;Parent=gene-NDY24_00540;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155861.1;locus_tag=NDY24_00540;product=N-acetylmuramoyl-L-alanine amidase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 114445 115398 . - . ID=gene-NDY24_00545;Name=NDY24_00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00545 CP098602.1 Protein Homology CDS 114445 115398 . - 0 ID=cds-UUE98461.1;Parent=gene-NDY24_00545;Dbxref=NCBI_GP:UUE98461.1;Name=UUE98461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004429239.1;locus_tag=NDY24_00545;product=DUF1684 domain-containing protein;protein_id=UUE98461.1;transl_table=11 CP098602.1 Genbank gene 115491 116363 . - . ID=gene-NDY24_00550;Name=NDY24_00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00550 CP098602.1 Protein Homology CDS 115491 116363 . - 0 ID=cds-UUE98462.1;Parent=gene-NDY24_00550;Dbxref=NCBI_GP:UUE98462.1;Name=UUE98462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005926214.1;locus_tag=NDY24_00550;product=sulfurtransferase;protein_id=UUE98462.1;transl_table=11 CP098602.1 Genbank gene 116360 117157 . - . ID=gene-NDY24_00555;Name=NDY24_00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00555 CP098602.1 Protein Homology CDS 116360 117157 . - 0 ID=cds-UUE98463.1;Parent=gene-NDY24_00555;Dbxref=NCBI_GP:UUE98463.1;Name=UUE98463.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,CoA pyrophosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036720.1;locus_tag=NDY24_00555;product=CoA pyrophosphatase;protein_id=UUE98463.1;transl_table=11 CP098602.1 Genbank gene 117283 117981 . - . ID=gene-NDY24_00560;Name=NDY24_00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00560 CP098602.1 Protein Homology CDS 117283 117981 . - 0 ID=cds-UUE98464.1;Parent=gene-NDY24_00560;Dbxref=NCBI_GP:UUE98464.1;Name=UUE98464.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804447.1;locus_tag=NDY24_00560;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=UUE98464.1;transl_table=11 CP098602.1 Genbank gene 118145 118927 . + . ID=gene-NDY24_00565;Name=NDY24_00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00565 CP098602.1 Protein Homology CDS 118145 118927 . + 0 ID=cds-UUE98465.1;Parent=gene-NDY24_00565;Dbxref=NCBI_GP:UUE98465.1;Name=UUE98465.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966234.1;locus_tag=NDY24_00565;product=enoyl-CoA hydratase-related protein;protein_id=UUE98465.1;transl_table=11 CP098602.1 Genbank gene 118938 119318 . + . ID=gene-NDY24_00570;Name=NDY24_00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00570 CP098602.1 Protein Homology CDS 118938 119318 . + 0 ID=cds-UUE98466.1;Parent=gene-NDY24_00570;Dbxref=NCBI_GP:UUE98466.1;Name=UUE98466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502812.1;locus_tag=NDY24_00570;product=hypothetical protein;protein_id=UUE98466.1;transl_table=11 CP098602.1 Genbank gene 119315 120025 . + . ID=gene-NDY24_00575;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=NDY24_00575 CP098602.1 Protein Homology CDS 119315 120025 . + 0 ID=cds-UUE98467.1;Parent=gene-NDY24_00575;Dbxref=NCBI_GP:UUE98467.1;Name=UUE98467.1;Ontology_term=GO:0006281,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502811.1;locus_tag=NDY24_00575;product=endonuclease III;protein_id=UUE98467.1;transl_table=11 CP098602.1 Genbank gene 120263 121774 . - . ID=gene-NDY24_00580;Name=NDY24_00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00580 CP098602.1 Protein Homology CDS 120263 121774 . - 0 ID=cds-UUE98468.1;Parent=gene-NDY24_00580;Dbxref=NCBI_GP:UUE98468.1;Name=UUE98468.1;Ontology_term=GO:0008272,GO:0015116,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162797.1;locus_tag=NDY24_00580;product=SulP family inorganic anion transporter;protein_id=UUE98468.1;transl_table=11 CP098602.1 Genbank gene 121843 122523 . - . ID=gene-NDY24_00585;Name=NDY24_00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00585 CP098602.1 Protein Homology CDS 121843 122523 . - 0 ID=cds-UUE98469.1;Parent=gene-NDY24_00585;Dbxref=NCBI_GP:UUE98469.1;Name=UUE98469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366497.1;locus_tag=NDY24_00585;product=carbonic anhydrase;protein_id=UUE98469.1;transl_table=11 CP098602.1 Genbank gene 122637 122957 . - . ID=gene-NDY24_00590;Name=NDY24_00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00590 CP098602.1 Protein Homology CDS 122637 122957 . - 0 ID=cds-UUF00236.1;Parent=gene-NDY24_00590;Dbxref=NCBI_GP:UUF00236.1;Name=UUF00236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902475.1;locus_tag=NDY24_00590;product=hypothetical protein;protein_id=UUF00236.1;transl_table=11 CP098602.1 Genbank gene 123297 124547 . + . ID=gene-NDY24_00595;Name=NDY24_00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00595 CP098602.1 Protein Homology CDS 123297 124547 . + 0 ID=cds-UUE98470.1;Parent=gene-NDY24_00595;Dbxref=NCBI_GP:UUE98470.1;Name=UUE98470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036714.1;locus_tag=NDY24_00595;product=OprO/OprP family phosphate-selective porin;protein_id=UUE98470.1;transl_table=11 CP098602.1 Genbank gene 124745 125764 . + . ID=gene-NDY24_00600;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=NDY24_00600 CP098602.1 Protein Homology CDS 124745 125764 . + 0 ID=cds-UUE98471.1;Parent=gene-NDY24_00600;Dbxref=NCBI_GP:UUE98471.1;Name=UUE98471.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408625.1;locus_tag=NDY24_00600;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=UUE98471.1;transl_table=11 CP098602.1 Genbank gene 125953 127047 . + . ID=gene-NDY24_00605;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=NDY24_00605 CP098602.1 Protein Homology CDS 125953 127047 . + 0 ID=cds-UUE98472.1;Parent=gene-NDY24_00605;Dbxref=NCBI_GP:UUE98472.1;Name=UUE98472.1;Ontology_term=GO:0015415,GO:0042301,GO:0030288,GO:0031362,GO:0055052;gbkey=CDS;gene=pstS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,anchored component of external side of plasma membrane|0031362||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA,phosphate ion binding|0042301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966222.1;locus_tag=NDY24_00605;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=UUE98472.1;transl_table=11 CP098602.1 Genbank pseudogene 127160 128135 . + . ID=gene-NDY24_00610;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=pseudogene;locus_tag=NDY24_00610;pseudo=true CP098602.1 Protein Homology CDS 127160 128135 . + 0 ID=cds-NDY24_00610;Parent=gene-NDY24_00610;Note=frameshifted%3B internal stop;Ontology_term=GO:0015415,GO:0005887,GO:0055052;gbkey=CDS;gene=pstC;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572163.1;locus_tag=NDY24_00610;product=phosphate ABC transporter permease subunit PstC;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 128135 129000 . + . ID=gene-NDY24_00615;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=pseudogene;locus_tag=NDY24_00615;pseudo=true CP098602.1 Protein Homology CDS 128135 129000 . + 0 ID=cds-NDY24_00615;Parent=gene-NDY24_00615;Note=frameshifted;Ontology_term=GO:0015415,GO:0005887,GO:0055052;gbkey=CDS;gene=pstA;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237788.1;locus_tag=NDY24_00615;product=phosphate ABC transporter permease PstA;pseudo=true;transl_table=11 CP098602.1 Genbank gene 129023 129853 . + . ID=gene-NDY24_00620;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=NDY24_00620 CP098602.1 Protein Homology CDS 129023 129853 . + 0 ID=cds-UUE98473.1;Parent=gene-NDY24_00620;Dbxref=NCBI_GP:UUE98473.1;Name=UUE98473.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237787.1;locus_tag=NDY24_00620;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=UUE98473.1;transl_table=11 CP098602.1 Genbank gene 129982 130686 . + . ID=gene-NDY24_00625;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=NDY24_00625 CP098602.1 Protein Homology CDS 129982 130686 . + 0 ID=cds-UUE98474.1;Parent=gene-NDY24_00625;Dbxref=NCBI_GP:UUE98474.1;Name=UUE98474.1;Ontology_term=GO:0051049,GO:0003700;gbkey=CDS;gene=phoU;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transport|0051049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994733.1;locus_tag=NDY24_00625;product=phosphate signaling complex protein PhoU;protein_id=UUE98474.1;transl_table=11 CP098602.1 Genbank gene 130816 131223 . + . ID=gene-NDY24_00630;Name=NDY24_00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00630 CP098602.1 Protein Homology CDS 130816 131223 . + 0 ID=cds-UUE98475.1;Parent=gene-NDY24_00630;Dbxref=NCBI_GP:UUE98475.1;Name=UUE98475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160317.1;locus_tag=NDY24_00630;product=RcnB family protein;protein_id=UUE98475.1;transl_table=11 CP098602.1 Genbank gene 131366 132007 . + . ID=gene-NDY24_00635;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=NDY24_00635 CP098602.1 Protein Homology CDS 131366 132007 . + 0 ID=cds-UUE98476.1;Parent=gene-NDY24_00635;Dbxref=NCBI_GP:UUE98476.1;Name=UUE98476.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=exoribonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572178.1;locus_tag=NDY24_00635;product=ribonuclease T;protein_id=UUE98476.1;transl_table=11 CP098602.1 Genbank gene 132211 135255 . - . ID=gene-NDY24_00640;Name=NDY24_00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00640 CP098602.1 Protein Homology CDS 132211 135255 . - 0 ID=cds-UUE98477.1;Parent=gene-NDY24_00640;Dbxref=NCBI_GP:UUE98477.1;Name=UUE98477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114768.1;locus_tag=NDY24_00640;product=diguanylate cyclase;protein_id=UUE98477.1;transl_table=11 CP098602.1 Genbank gene 135510 136259 . - . ID=gene-NDY24_00645;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=NDY24_00645 CP098602.1 Protein Homology CDS 135510 136259 . - 0 ID=cds-UUE98478.1;Parent=gene-NDY24_00645;Dbxref=NCBI_GP:UUE98478.1;Name=UUE98478.1;Ontology_term=GO:0009451,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804425.1;locus_tag=NDY24_00645;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=UUE98478.1;transl_table=11 CP098602.1 Genbank pseudogene 136474 136560 . - . ID=gene-NDY24_00650;Name=NDY24_00650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_00650;pseudo=true CP098602.1 Protein Homology CDS 136474 136560 . - 0 ID=cds-NDY24_00650;Parent=gene-NDY24_00650;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366469.1;locus_tag=NDY24_00650;product=GFA family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 136735 139293 . - . ID=gene-NDY24_00655;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=NDY24_00655 CP098602.1 Protein Homology CDS 136735 139293 . - 0 ID=cds-UUE98479.1;Parent=gene-NDY24_00655;Dbxref=NCBI_GP:UUE98479.1;Name=UUE98479.1;Ontology_term=GO:0006401,GO:0008997;gbkey=CDS;gene=rnr;go_function=ribonuclease R activity|0008997||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346990.1;locus_tag=NDY24_00655;product=ribonuclease R;protein_id=UUE98479.1;transl_table=11 CP098602.1 Genbank gene 139415 139501 . + . ID=gene-NDY24_00660;Name=NDY24_00660;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_00660 CP098602.1 tRNAscan-SE tRNA 139415 139501 . + . ID=rna-NDY24_00660;Parent=gene-NDY24_00660;anticodon=(pos:139449..139451);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_00660;product=tRNA-Leu CP098602.1 tRNAscan-SE exon 139415 139501 . + . ID=exon-NDY24_00660-1;Parent=rna-NDY24_00660;anticodon=(pos:139449..139451);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_00660;product=tRNA-Leu CP098602.1 Genbank gene 139622 141145 . - . ID=gene-NDY24_00665;Name=NDY24_00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00665 CP098602.1 Protein Homology CDS 139622 141145 . - 0 ID=cds-UUE98480.1;Parent=gene-NDY24_00665;Dbxref=NCBI_GP:UUE98480.1;Name=UUE98480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438702.1;locus_tag=NDY24_00665;product=platelet-activating factor acetylhydrolase IB subunit;protein_id=UUE98480.1;transl_table=11 CP098602.1 Genbank gene 141495 142643 . - . ID=gene-NDY24_00670;Name=NDY24_00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00670 CP098602.1 Protein Homology CDS 141495 142643 . - 0 ID=cds-UUE98481.1;Parent=gene-NDY24_00670;Dbxref=NCBI_GP:UUE98481.1;Name=UUE98481.1;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005410250.1;locus_tag=NDY24_00670;product=acyl-CoA dehydrogenase family protein;protein_id=UUE98481.1;transl_table=11 CP098602.1 Genbank gene 142766 143761 . + . ID=gene-NDY24_00675;Name=NDY24_00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00675 CP098602.1 Protein Homology CDS 142766 143761 . + 0 ID=cds-UUE98482.1;Parent=gene-NDY24_00675;Dbxref=NCBI_GP:UUE98482.1;Name=UUE98482.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450494.1;locus_tag=NDY24_00675;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=UUE98482.1;transl_table=11 CP098602.1 Genbank gene 143758 144903 . + . ID=gene-NDY24_00680;Name=NDY24_00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00680 CP098602.1 Protein Homology CDS 143758 144903 . + 0 ID=cds-UUE98483.1;Parent=gene-NDY24_00680;Dbxref=NCBI_GP:UUE98483.1;Name=UUE98483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380164.1;locus_tag=NDY24_00680;product=homocysteine S-methyltransferase family protein;protein_id=UUE98483.1;transl_table=11 CP098602.1 Genbank gene 145060 147822 . + . ID=gene-NDY24_00685;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=NDY24_00685 CP098602.1 Protein Homology CDS 145060 147822 . + 0 ID=cds-UUE98484.1;Parent=gene-NDY24_00685;Dbxref=NCBI_GP:UUE98484.1;Name=UUE98484.1;Ontology_term=GO:0009086,GO:0008705;gbkey=CDS;gene=metH;go_function=methionine synthase activity|0008705||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160303.1;locus_tag=NDY24_00685;product=methionine synthase;protein_id=UUE98484.1;transl_table=11 CP098602.1 Genbank gene 148243 149448 . - . ID=gene-NDY24_00690;Name=NDY24_00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00690 CP098602.1 Protein Homology CDS 148243 149448 . - 0 ID=cds-UUE98485.1;Parent=gene-NDY24_00690;Dbxref=NCBI_GP:UUE98485.1;Name=UUE98485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051002.1;locus_tag=NDY24_00690;product=AGE family epimerase/isomerase;protein_id=UUE98485.1;transl_table=11 CP098602.1 Genbank gene 149445 150431 . - . ID=gene-NDY24_00695;Name=NDY24_00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00695 CP098602.1 Protein Homology CDS 149445 150431 . - 0 ID=cds-UUE98486.1;Parent=gene-NDY24_00695;Dbxref=NCBI_GP:UUE98486.1;Name=UUE98486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483712.1;locus_tag=NDY24_00695;product=carbohydrate kinase;protein_id=UUE98486.1;transl_table=11 CP098602.1 Genbank gene 150428 151738 . - . ID=gene-NDY24_00700;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=NDY24_00700 CP098602.1 Protein Homology CDS 150428 151738 . - 0 ID=cds-UUE98487.1;Parent=gene-NDY24_00700;Dbxref=NCBI_GP:UUE98487.1;Name=UUE98487.1;Ontology_term=GO:0015756,GO:0015535,GO:0005887;gbkey=CDS;gene=fucP;go_component=integral component of plasma membrane|0005887||IEA;go_function=fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408378.1;locus_tag=NDY24_00700;product=L-fucose:H+ symporter permease;protein_id=UUE98487.1;transl_table=11 CP098602.1 Genbank gene 151752 152882 . - . ID=gene-NDY24_00705;Name=NDY24_00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00705 CP098602.1 Protein Homology CDS 151752 152882 . - 0 ID=cds-UUE98488.1;Parent=gene-NDY24_00705;Dbxref=NCBI_GP:UUE98488.1;Name=UUE98488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451865.1;locus_tag=NDY24_00705;product=LacI family DNA-binding transcriptional regulator;protein_id=UUE98488.1;transl_table=11 CP098602.1 Genbank gene 153102 153938 . - . ID=gene-NDY24_00710;Name=NDY24_00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00710 CP098602.1 Protein Homology CDS 153102 153938 . - 0 ID=cds-UUE98489.1;Parent=gene-NDY24_00710;Dbxref=NCBI_GP:UUE98489.1;Name=UUE98489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483704.1;locus_tag=NDY24_00710;product=transporter;protein_id=UUE98489.1;transl_table=11 CP098602.1 Genbank gene 154188 154943 . - . ID=gene-NDY24_00715;Name=NDY24_00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00715 CP098602.1 Protein Homology CDS 154188 154943 . - 0 ID=cds-UUE98490.1;Parent=gene-NDY24_00715;Dbxref=NCBI_GP:UUE98490.1;Name=UUE98490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463037.1;locus_tag=NDY24_00715;product=DUF2058 family protein;protein_id=UUE98490.1;transl_table=11 CP098602.1 Genbank gene 154944 155180 . - . ID=gene-NDY24_00720;Name=NDY24_00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00720 CP098602.1 Protein Homology CDS 154944 155180 . - 0 ID=cds-UUE98491.1;Parent=gene-NDY24_00720;Dbxref=NCBI_GP:UUE98491.1;Name=UUE98491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036690.1;locus_tag=NDY24_00720;product=SlyX family protein;protein_id=UUE98491.1;transl_table=11 CP098602.1 Genbank gene 155173 156522 . - . ID=gene-NDY24_00725;Name=NDY24_00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00725 CP098602.1 Protein Homology CDS 155173 156522 . - 0 ID=cds-UUE98492.1;Parent=gene-NDY24_00725;Dbxref=NCBI_GP:UUE98492.1;Name=UUE98492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804407.1;locus_tag=NDY24_00725;product=UDP-glucose/GDP-mannose dehydrogenase family protein;protein_id=UUE98492.1;transl_table=11 CP098602.1 Genbank gene 156547 157518 . - . ID=gene-NDY24_00730;Name=NDY24_00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00730 CP098602.1 Protein Homology CDS 156547 157518 . - 0 ID=cds-UUE98493.1;Parent=gene-NDY24_00730;Dbxref=NCBI_GP:UUE98493.1;Name=UUE98493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463036.1;locus_tag=NDY24_00730;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=UUE98493.1;transl_table=11 CP098602.1 Genbank gene 157609 158166 . - . ID=gene-NDY24_00735;Name=NDY24_00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00735 CP098602.1 Protein Homology CDS 157609 158166 . - 0 ID=cds-UUE98494.1;Parent=gene-NDY24_00735;Dbxref=NCBI_GP:UUE98494.1;Name=UUE98494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007963377.1;locus_tag=NDY24_00735;product=glutathione peroxidase;protein_id=UUE98494.1;transl_table=11 CP098602.1 Genbank gene 158301 158549 . + . ID=gene-NDY24_00740;Name=NDY24_00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00740 CP098602.1 Protein Homology CDS 158301 158549 . + 0 ID=cds-UUE98495.1;Parent=gene-NDY24_00740;Dbxref=NCBI_GP:UUE98495.1;Name=UUE98495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366438.1;locus_tag=NDY24_00740;product=hypothetical protein;protein_id=UUE98495.1;transl_table=11 CP098602.1 Genbank gene 158552 158914 . + . ID=gene-NDY24_00745;Name=NDY24_00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00745 CP098602.1 Protein Homology CDS 158552 158914 . + 0 ID=cds-UUE98496.1;Parent=gene-NDY24_00745;Dbxref=NCBI_GP:UUE98496.1;Name=UUE98496.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988451.1;locus_tag=NDY24_00745;product=GntR family transcriptional regulator;protein_id=UUE98496.1;transl_table=11 CP098602.1 Genbank gene 158911 159786 . + . ID=gene-NDY24_00750;Name=NDY24_00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00750 CP098602.1 Protein Homology CDS 158911 159786 . + 0 ID=cds-UUE98497.1;Parent=gene-NDY24_00750;Dbxref=NCBI_GP:UUE98497.1;Name=UUE98497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913764.1;locus_tag=NDY24_00750;product=ABC transporter ATP-binding protein;protein_id=UUE98497.1;transl_table=11 CP098602.1 Genbank gene 159783 160748 . + . ID=gene-NDY24_00755;Name=NDY24_00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00755 CP098602.1 Protein Homology CDS 159783 160748 . + 0 ID=cds-UUE98498.1;Parent=gene-NDY24_00755;Dbxref=NCBI_GP:UUE98498.1;Name=UUE98498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036684.1;locus_tag=NDY24_00755;product=ABC transporter permease;protein_id=UUE98498.1;transl_table=11 CP098602.1 Genbank gene 160763 161593 . + . ID=gene-NDY24_00760;Name=NDY24_00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00760 CP098602.1 Protein Homology CDS 160763 161593 . + 0 ID=cds-UUE98499.1;Parent=gene-NDY24_00760;Dbxref=NCBI_GP:UUE98499.1;Name=UUE98499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448702.1;locus_tag=NDY24_00760;product=hypothetical protein;protein_id=UUE98499.1;transl_table=11 CP098602.1 Genbank gene 161626 162156 . + . ID=gene-NDY24_00765;Name=NDY24_00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00765 CP098602.1 Protein Homology CDS 161626 162156 . + 0 ID=cds-UUE98500.1;Parent=gene-NDY24_00765;Dbxref=NCBI_GP:UUE98500.1;Name=UUE98500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483683.1;locus_tag=NDY24_00765;product=YggN family protein;protein_id=UUE98500.1;transl_table=11 CP098602.1 Genbank pseudogene 162368 162791 . + . ID=gene-NDY24_00770;Name=NDY24_00770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_00770;pseudo=true CP098602.1 Protein Homology CDS 162368 162791 . + 0 ID=cds-NDY24_00770;Parent=gene-NDY24_00770;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159043.1;locus_tag=NDY24_00770;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 162919 164325 . - . ID=gene-NDY24_00775;Name=NDY24_00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00775 CP098602.1 Protein Homology CDS 162919 164325 . - 0 ID=cds-UUE98501.1;Parent=gene-NDY24_00775;Dbxref=NCBI_GP:UUE98501.1;Name=UUE98501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483678.1;locus_tag=NDY24_00775;product=class II fumarate hydratase;protein_id=UUE98501.1;transl_table=11 CP098602.1 Genbank gene 164617 165939 . + . ID=gene-NDY24_00780;Name=NDY24_00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00780 CP098602.1 Protein Homology CDS 164617 165939 . + 0 ID=cds-UUF00237.1;Parent=gene-NDY24_00780;Dbxref=NCBI_GP:UUF00237.1;Name=UUF00237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005925596.1;locus_tag=NDY24_00780;product=hemolysin family protein;protein_id=UUF00237.1;transl_table=11 CP098602.1 Genbank pseudogene 165976 167361 . + . ID=gene-NDY24_00785;Name=purB;gbkey=Gene;gene=purB;gene_biotype=pseudogene;locus_tag=NDY24_00785;pseudo=true CP098602.1 Protein Homology CDS 165976 167361 . + 0 ID=cds-NDY24_00785;Parent=gene-NDY24_00785;Note=frameshifted;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156796.1;locus_tag=NDY24_00785;product=adenylosuccinate lyase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 167440 168045 . + . ID=gene-NDY24_00790;Name=NDY24_00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00790 CP098602.1 Protein Homology CDS 167440 168045 . + 0 ID=cds-UUE98502.1;Parent=gene-NDY24_00790;Dbxref=NCBI_GP:UUE98502.1;Name=UUE98502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507333.1;locus_tag=NDY24_00790;product=DUF3060 domain-containing protein;protein_id=UUE98502.1;transl_table=11 CP098602.1 Genbank gene 168379 169878 . + . ID=gene-NDY24_00795;Name=NDY24_00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00795 CP098602.1 Protein Homology CDS 168379 169878 . + 0 ID=cds-UUE98503.1;Parent=gene-NDY24_00795;Dbxref=NCBI_GP:UUE98503.1;Name=UUE98503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448695.1;locus_tag=NDY24_00795;product=cupin domain-containing protein;protein_id=UUE98503.1;transl_table=11 CP098602.1 Genbank pseudogene 169875 170806 . + . ID=gene-NDY24_00800;Name=NDY24_00800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_00800;pseudo=true CP098602.1 Protein Homology CDS 169875 170806 . + 0 ID=cds-NDY24_00800;Parent=gene-NDY24_00800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571998.1;locus_tag=NDY24_00800;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 170988 173817 . + . ID=gene-NDY24_00805;Name=NDY24_00805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_00805;pseudo=true CP098602.1 Protein Homology CDS 170988 173817 . + 0 ID=cds-NDY24_00805;Parent=gene-NDY24_00805;Note=frameshifted;Ontology_term=GO:0006099,GO:0004591,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507330.1;locus_tag=NDY24_00805;product=2-oxoglutarate dehydrogenase E1 component;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 173860 175069 . + . ID=gene-NDY24_00810;Name=sucB;gbkey=Gene;gene=sucB;gene_biotype=pseudogene;locus_tag=NDY24_00810;pseudo=true CP098602.1 Protein Homology CDS 173860 175069 . + 0 ID=cds-NDY24_00810;Parent=gene-NDY24_00810;Note=frameshifted;Ontology_term=GO:0006099,GO:0006554,GO:0004149,GO:0045252;gbkey=CDS;gene=sucB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,lysine catabolic process|0006554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572000.1;locus_tag=NDY24_00810;product=dihydrolipoyllysine-residue succinyltransferase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 175220 176656 . + . ID=gene-NDY24_00815;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=NDY24_00815 CP098602.1 Protein Homology CDS 175220 176656 . + 0 ID=cds-UUE98504.1;Parent=gene-NDY24_00815;Dbxref=NCBI_GP:UUE98504.1;Name=UUE98504.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159046.1;locus_tag=NDY24_00815;product=dihydrolipoyl dehydrogenase;protein_id=UUE98504.1;transl_table=11 CP098602.1 Genbank pseudogene 176888 177461 . + . ID=gene-NDY24_00820;Name=NDY24_00820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_00820;pseudo=true CP098602.1 Protein Homology CDS 176888 177461 . + 0 ID=cds-NDY24_00820;Parent=gene-NDY24_00820;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366391.1;locus_tag=NDY24_00820;product=TIGR00730 family Rossman fold protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 177812 178390 . + . ID=gene-NDY24_00825;Name=NDY24_00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00825 CP098602.1 Protein Homology CDS 177812 178390 . + 0 ID=cds-UUE98505.1;Parent=gene-NDY24_00825;Dbxref=NCBI_GP:UUE98505.1;Name=UUE98505.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013378.2;locus_tag=NDY24_00825;product=YigZ family protein;protein_id=UUE98505.1;transl_table=11 CP098602.1 Genbank gene 178609 179310 . - . ID=gene-NDY24_00830;Name=NDY24_00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00830 CP098602.1 Protein Homology CDS 178609 179310 . - 0 ID=cds-UUF00238.1;Parent=gene-NDY24_00830;Dbxref=NCBI_GP:UUF00238.1;Name=UUF00238.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014114.2;locus_tag=NDY24_00830;product=LD-carboxypeptidase;protein_id=UUF00238.1;transl_table=11 CP098602.1 Genbank gene 179826 181595 . + . ID=gene-NDY24_00835;Name=NDY24_00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00835 CP098602.1 Protein Homology CDS 179826 181595 . + 0 ID=cds-UUE98506.1;Parent=gene-NDY24_00835;Dbxref=NCBI_GP:UUE98506.1;Name=UUE98506.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156786.1;locus_tag=NDY24_00835;product=ABC transporter transmembrane domain-containing protein;protein_id=UUE98506.1;transl_table=11 CP098602.1 Genbank pseudogene 181712 182608 . + . ID=gene-NDY24_00840;Name=NDY24_00840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_00840;pseudo=true CP098602.1 Protein Homology CDS 181712 182608 . + 0 ID=cds-NDY24_00840;Parent=gene-NDY24_00840;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964693.1;locus_tag=NDY24_00840;product=hydrogen peroxide-inducible genes activator;pseudo=true;transl_table=11 CP098602.1 Genbank gene 182700 184388 . + . ID=gene-NDY24_00845;Name=NDY24_00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00845 CP098602.1 Protein Homology CDS 182700 184388 . + 0 ID=cds-UUE98507.1;Parent=gene-NDY24_00845;Dbxref=NCBI_GP:UUE98507.1;Name=UUE98507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171987.1;locus_tag=NDY24_00845;product=ABC transporter ATP-binding protein/permease;protein_id=UUE98507.1;transl_table=11 CP098602.1 Genbank gene 184372 185457 . + . ID=gene-NDY24_00850;Name=NDY24_00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00850 CP098602.1 Protein Homology CDS 184372 185457 . + 0 ID=cds-UUE98508.1;Parent=gene-NDY24_00850;Dbxref=NCBI_GP:UUE98508.1;Name=UUE98508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849801.1;locus_tag=NDY24_00850;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=UUE98508.1;transl_table=11 CP098602.1 Genbank gene 185454 186857 . + . ID=gene-NDY24_00855;Name=NDY24_00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00855 CP098602.1 Protein Homology CDS 185454 186857 . + 0 ID=cds-UUE98509.1;Parent=gene-NDY24_00855;Dbxref=NCBI_GP:UUE98509.1;Name=UUE98509.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380228.1;locus_tag=NDY24_00855;product=TolC family protein;protein_id=UUE98509.1;transl_table=11 CP098602.1 Genbank gene 187001 187213 . + . ID=gene-NDY24_00860;Name=NDY24_00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00860 CP098602.1 Protein Homology CDS 187001 187213 . + 0 ID=cds-UUE98510.1;Parent=gene-NDY24_00860;Dbxref=NCBI_GP:UUE98510.1;Name=UUE98510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507319.1;locus_tag=NDY24_00860;product=hypothetical protein;protein_id=UUE98510.1;transl_table=11 CP098602.1 Genbank gene 187497 188624 . - . ID=gene-NDY24_00865;Name=NDY24_00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00865 CP098602.1 Protein Homology CDS 187497 188624 . - 0 ID=cds-UUE98511.1;Parent=gene-NDY24_00865;Dbxref=NCBI_GP:UUE98511.1;Name=UUE98511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449463.1;locus_tag=NDY24_00865;product=prephenate dehydrogenase;protein_id=UUE98511.1;transl_table=11 CP098602.1 Genbank pseudogene 188621 189542 . - . ID=gene-NDY24_00870;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=pseudogene;locus_tag=NDY24_00870;pseudo=true CP098602.1 Protein Homology CDS 188621 189542 . - 0 ID=cds-NDY24_00870;Parent=gene-NDY24_00870;Note=frameshifted;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804365.1;locus_tag=NDY24_00870;product=pyridoxal kinase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 189795 190970 . - . ID=gene-NDY24_00875;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=NDY24_00875 CP098602.1 Protein Homology CDS 189795 190970 . - 0 ID=cds-UUE98512.1;Parent=gene-NDY24_00875;Dbxref=NCBI_GP:UUE98512.1;Name=UUE98512.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438731.1;locus_tag=NDY24_00875;product=molecular chaperone DnaJ;protein_id=UUE98512.1;transl_table=11 CP098602.1 Genbank gene 191070 192998 . - . ID=gene-NDY24_00880;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=NDY24_00880 CP098602.1 Protein Homology CDS 191070 192998 . - 0 ID=cds-UUE98513.1;Parent=gene-NDY24_00880;Dbxref=NCBI_GP:UUE98513.1;Name=UUE98513.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010484469.1;locus_tag=NDY24_00880;product=molecular chaperone DnaK;protein_id=UUE98513.1;transl_table=11 CP098602.1 Genbank pseudogene 193140 193657 . - . ID=gene-NDY24_00885;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=pseudogene;locus_tag=NDY24_00885;pseudo=true CP098602.1 Protein Homology CDS 193140 193657 . - 0 ID=cds-NDY24_00885;Parent=gene-NDY24_00885;Note=frameshifted;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483633.1;locus_tag=NDY24_00885;product=nucleotide exchange factor GrpE;pseudo=true;transl_table=11 CP098602.1 Genbank gene 193759 194811 . - . ID=gene-NDY24_00890;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=NDY24_00890 CP098602.1 Protein Homology CDS 193759 194811 . - 0 ID=cds-UUE98514.1;Parent=gene-NDY24_00890;Dbxref=NCBI_GP:UUE98514.1;Name=UUE98514.1;Ontology_term=GO:0009408,GO:0005737;gbkey=CDS;gene=hrcA;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237768.1;locus_tag=NDY24_00890;product=heat-inducible transcriptional repressor HrcA;protein_id=UUE98514.1;transl_table=11 CP098602.1 Genbank gene 194928 196592 . + . ID=gene-NDY24_00895;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=NDY24_00895 CP098602.1 Protein Homology CDS 194928 196592 . + 0 ID=cds-UUE98515.1;Parent=gene-NDY24_00895;Dbxref=NCBI_GP:UUE98515.1;Name=UUE98515.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116147.1;locus_tag=NDY24_00895;product=DNA repair protein RecN;protein_id=UUE98515.1;transl_table=11 CP098602.1 Genbank gene 196703 197113 . - . ID=gene-NDY24_00900;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=NDY24_00900 CP098602.1 Protein Homology CDS 196703 197113 . - 0 ID=cds-UUE98516.1;Parent=gene-NDY24_00900;Dbxref=NCBI_GP:UUE98516.1;Name=UUE98516.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804358.1;locus_tag=NDY24_00900;product=ferric iron uptake transcriptional regulator;protein_id=UUE98516.1;transl_table=11 CP098602.1 Genbank gene 197218 197613 . + . ID=gene-NDY24_00905;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=NDY24_00905 CP098602.1 Protein Homology CDS 197218 197613 . + 0 ID=cds-UUE98517.1;Parent=gene-NDY24_00905;Dbxref=NCBI_GP:UUE98517.1;Name=UUE98517.1;Ontology_term=GO:0019867;gbkey=CDS;gene=bamE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449455.1;locus_tag=NDY24_00905;product=outer membrane protein assembly factor BamE;protein_id=UUE98517.1;transl_table=11 CP098602.1 Genbank pseudogene 197907 198119 . - . ID=gene-NDY24_00910;Name=NDY24_00910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_00910;pseudo=true CP098602.1 Protein Homology CDS 197907 198119 . - 0 ID=cds-NDY24_00910;Parent=gene-NDY24_00910;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050972.1;locus_tag=NDY24_00910;product=RnfH family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 198168 198599 . - . ID=gene-NDY24_00915;Name=NDY24_00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00915 CP098602.1 Protein Homology CDS 198168 198599 . - 0 ID=cds-UUE98518.1;Parent=gene-NDY24_00915;Dbxref=NCBI_GP:UUE98518.1;Name=UUE98518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901567.1;locus_tag=NDY24_00915;product=type II toxin-antitoxin system RatA family toxin;protein_id=UUE98518.1;transl_table=11 CP098602.1 Genbank gene 198660 199163 . + . ID=gene-NDY24_00920;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=NDY24_00920 CP098602.1 Protein Homology CDS 198660 199163 . + 0 ID=cds-UUE98519.1;Parent=gene-NDY24_00920;Dbxref=NCBI_GP:UUE98519.1;Name=UUE98519.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050971.1;locus_tag=NDY24_00920;product=SsrA-binding protein SmpB;protein_id=UUE98519.1;transl_table=11 CP098602.1 Genbank gene 199296 201746 . - . ID=gene-NDY24_00925;Name=NDY24_00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00925 CP098602.1 Protein Homology CDS 199296 201746 . - 0 ID=cds-UUE98520.1;Parent=gene-NDY24_00925;Dbxref=NCBI_GP:UUE98520.1;Name=UUE98520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163234.1;locus_tag=NDY24_00925;product=S8 family serine peptidase;protein_id=UUE98520.1;transl_table=11 CP098602.1 Genbank gene 201882 202278 . + . ID=gene-NDY24_00930;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=NDY24_00930 CP098602.1 cmsearch tmRNA 201882 202278 . + . ID=rna-NDY24_00930;Parent=gene-NDY24_00930;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_00930;product=transfer-messenger RNA CP098602.1 cmsearch exon 201882 202278 . + . ID=exon-NDY24_00930-1;Parent=rna-NDY24_00930;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_00930;product=transfer-messenger RNA CP098602.1 Genbank pseudogene 202386 203384 . + . ID=gene-NDY24_00935;Name=NDY24_00935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_00935;pseudo=true CP098602.1 Protein Homology CDS 202386 203384 . + 0 ID=cds-NDY24_00935;Parent=gene-NDY24_00935;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438743.1;locus_tag=NDY24_00935;product=integrase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 203448 204590 . + . ID=gene-NDY24_00940;Name=NDY24_00940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_00940;pseudo=true CP098602.1 Protein Homology CDS 203448 204590 . + 0 ID=cds-NDY24_00940;Parent=gene-NDY24_00940;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=NDY24_00940;product=IS3 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 205302 205994 . + . ID=gene-NDY24_00945;Name=NDY24_00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00945 CP098602.1 GeneMarkS-2+ CDS 205302 205994 . + 0 ID=cds-UUE98521.1;Parent=gene-NDY24_00945;Dbxref=NCBI_GP:UUE98521.1;Name=UUE98521.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_00945;product=hypothetical protein;protein_id=UUE98521.1;transl_table=11 CP098602.1 Genbank gene 206186 206893 . - . ID=gene-NDY24_00950;Name=NDY24_00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00950 CP098602.1 GeneMarkS-2+ CDS 206186 206893 . - 0 ID=cds-UUE98522.1;Parent=gene-NDY24_00950;Dbxref=NCBI_GP:UUE98522.1;Name=UUE98522.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_00950;product=helix-turn-helix domain-containing protein;protein_id=UUE98522.1;transl_table=11 CP098602.1 Genbank gene 206981 207379 . + . ID=gene-NDY24_00955;Name=NDY24_00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00955 CP098602.1 Protein Homology CDS 206981 207379 . + 0 ID=cds-UUF00239.1;Parent=gene-NDY24_00955;Dbxref=NCBI_GP:UUF00239.1;Name=UUF00239.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04111.1;locus_tag=NDY24_00955;product=DNA-binding protein;protein_id=UUF00239.1;transl_table=11 CP098602.1 Genbank gene 207277 207543 . + . ID=gene-NDY24_00960;Name=NDY24_00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00960 CP098602.1 Protein Homology CDS 207277 207543 . + 0 ID=cds-UUF00240.1;Parent=gene-NDY24_00960;Dbxref=NCBI_GP:UUF00240.1;Name=UUF00240.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016487.2;locus_tag=NDY24_00960;product=hypothetical protein;protein_id=UUF00240.1;transl_table=11 CP098602.1 Genbank gene 207554 207832 . + . ID=gene-NDY24_00965;Name=NDY24_00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00965 CP098602.1 Protein Homology CDS 207554 207832 . + 0 ID=cds-UUE98523.1;Parent=gene-NDY24_00965;Dbxref=NCBI_GP:UUE98523.1;Name=UUE98523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851009.1;locus_tag=NDY24_00965;product=hypothetical protein;protein_id=UUE98523.1;transl_table=11 CP098602.1 Genbank pseudogene 208052 210748 . + . ID=gene-NDY24_00970;Name=NDY24_00970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_00970;pseudo=true CP098602.1 Protein Homology CDS 208052 210748 . + 0 ID=cds-NDY24_00970;Parent=gene-NDY24_00970;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258449.1;locus_tag=NDY24_00970;product=toprim domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 211072 211289 . + . ID=gene-NDY24_00975;Name=NDY24_00975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_00975;pseudo=true CP098602.1 Protein Homology CDS 211072 211289 . + 0 ID=cds-NDY24_00975;Parent=gene-NDY24_00975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005929523.1;locus_tag=NDY24_00975;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 211286 211573 . + . ID=gene-NDY24_00980;Name=NDY24_00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00980 CP098602.1 Protein Homology CDS 211286 211573 . + 0 ID=cds-UUE98524.1;Parent=gene-NDY24_00980;Dbxref=NCBI_GP:UUE98524.1;Name=UUE98524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472862.1;locus_tag=NDY24_00980;product=hypothetical protein;protein_id=UUE98524.1;transl_table=11 CP098602.1 Genbank gene 211573 211845 . + . ID=gene-NDY24_00985;Name=NDY24_00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00985 CP098602.1 Protein Homology CDS 211573 211845 . + 0 ID=cds-UUE98525.1;Parent=gene-NDY24_00985;Dbxref=NCBI_GP:UUE98525.1;Name=UUE98525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091201.1;locus_tag=NDY24_00985;product=hypothetical protein;protein_id=UUE98525.1;transl_table=11 CP098602.1 Genbank gene 211924 212349 . + . ID=gene-NDY24_00990;Name=NDY24_00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00990 CP098602.1 Protein Homology CDS 211924 212349 . + 0 ID=cds-UUE98526.1;Parent=gene-NDY24_00990;Dbxref=NCBI_GP:UUE98526.1;Name=UUE98526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472864.1;locus_tag=NDY24_00990;product=hypothetical protein;protein_id=UUE98526.1;transl_table=11 CP098602.1 Genbank gene 212342 212524 . + . ID=gene-NDY24_00995;Name=NDY24_00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_00995 CP098602.1 Protein Homology CDS 212342 212524 . + 0 ID=cds-UUE98527.1;Parent=gene-NDY24_00995;Dbxref=NCBI_GP:UUE98527.1;Name=UUE98527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015471751.1;locus_tag=NDY24_00995;product=hypothetical protein;protein_id=UUE98527.1;transl_table=11 CP098602.1 Genbank gene 212517 212789 . + . ID=gene-NDY24_01000;Name=NDY24_01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01000 CP098602.1 Protein Homology CDS 212517 212789 . + 0 ID=cds-UUE98528.1;Parent=gene-NDY24_01000;Dbxref=NCBI_GP:UUE98528.1;Name=UUE98528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572785.1;locus_tag=NDY24_01000;product=hypothetical protein;protein_id=UUE98528.1;transl_table=11 CP098602.1 Genbank pseudogene 212786 213012 . + . ID=gene-NDY24_01005;Name=NDY24_01005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_01005;pseudo=true CP098602.1 Protein Homology CDS 212786 213012 . + 0 ID=cds-NDY24_01005;Parent=gene-NDY24_01005;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091205.1;locus_tag=NDY24_01005;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 213278 213487 . + . ID=gene-NDY24_01010;Name=NDY24_01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01010 CP098602.1 Protein Homology CDS 213278 213487 . + 0 ID=cds-UUE98529.1;Parent=gene-NDY24_01010;Dbxref=NCBI_GP:UUE98529.1;Name=UUE98529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167594.1;locus_tag=NDY24_01010;product=hypothetical protein;protein_id=UUE98529.1;transl_table=11 CP098602.1 Genbank gene 213484 213702 . + . ID=gene-NDY24_01015;Name=NDY24_01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01015 CP098602.1 Protein Homology CDS 213484 213702 . + 0 ID=cds-UUE98530.1;Parent=gene-NDY24_01015;Dbxref=NCBI_GP:UUE98530.1;Name=UUE98530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572794.1;locus_tag=NDY24_01015;product=hypothetical protein;protein_id=UUE98530.1;transl_table=11 CP098602.1 Genbank pseudogene 213702 214942 . + . ID=gene-NDY24_01020;Name=NDY24_01020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_01020;pseudo=true CP098602.1 Protein Homology CDS 213702 214942 . + 0 ID=cds-NDY24_01020;Parent=gene-NDY24_01020;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051722.1;locus_tag=NDY24_01020;product=integrase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 215020 215095 . - . ID=gene-NDY24_01025;Name=NDY24_01025;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_01025 CP098602.1 tRNAscan-SE tRNA 215020 215095 . - . ID=rna-NDY24_01025;Parent=gene-NDY24_01025;anticodon=(pos:complement(215059..215061));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_01025;product=tRNA-Asn CP098602.1 tRNAscan-SE exon 215020 215095 . - . ID=exon-NDY24_01025-1;Parent=rna-NDY24_01025;anticodon=(pos:complement(215059..215061));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_01025;product=tRNA-Asn CP098602.1 Genbank gene 215159 215605 . - . ID=gene-NDY24_01030;Name=NDY24_01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01030 CP098602.1 Protein Homology CDS 215159 215605 . - 0 ID=cds-UUE98531.1;Parent=gene-NDY24_01030;Dbxref=NCBI_GP:UUE98531.1;Name=UUE98531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019186176.1;locus_tag=NDY24_01030;product=type IV pilin protein;protein_id=UUE98531.1;transl_table=11 CP098602.1 Genbank gene 215844 218138 . - . ID=gene-NDY24_01035;Name=NDY24_01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01035 CP098602.1 Protein Homology CDS 215844 218138 . - 0 ID=cds-UUE98532.1;Parent=gene-NDY24_01035;Dbxref=NCBI_GP:UUE98532.1;Name=UUE98532.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017388.2;locus_tag=NDY24_01035;product=PilC/PilY family type IV pilus protein;protein_id=UUE98532.1;transl_table=11 CP098602.1 Genbank gene 218192 218722 . - . ID=gene-NDY24_01040;Name=NDY24_01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01040 CP098602.1 GeneMarkS-2+ CDS 218192 218722 . - 0 ID=cds-UUE98533.1;Parent=gene-NDY24_01040;Dbxref=NCBI_GP:UUE98533.1;Name=UUE98533.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_01040;product=hypothetical protein;protein_id=UUE98533.1;transl_table=11 CP098602.1 Genbank gene 219029 219325 . - . ID=gene-NDY24_01045;Name=NDY24_01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01045 CP098602.1 GeneMarkS-2+ CDS 219029 219325 . - 0 ID=cds-UUE98534.1;Parent=gene-NDY24_01045;Dbxref=NCBI_GP:UUE98534.1;Name=UUE98534.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_01045;product=hypothetical protein;protein_id=UUE98534.1;transl_table=11 CP098602.1 Genbank gene 219335 219865 . - . ID=gene-NDY24_01050;Name=NDY24_01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01050 CP098602.1 Protein Homology CDS 219335 219865 . - 0 ID=cds-UUE98535.1;Parent=gene-NDY24_01050;Dbxref=NCBI_GP:UUE98535.1;Name=UUE98535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005408859.1;locus_tag=NDY24_01050;product=PilX N-terminal domain-containing pilus assembly protein;protein_id=UUE98535.1;transl_table=11 CP098602.1 Genbank pseudogene 219855 220984 . - . ID=gene-NDY24_01055;Name=NDY24_01055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_01055;pseudo=true CP098602.1 Protein Homology CDS 219855 220984 . - 0 ID=cds-NDY24_01055;Parent=gene-NDY24_01055;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920243.1;locus_tag=NDY24_01055;product=PilW family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 220986 221462 . - . ID=gene-NDY24_01060;Name=pilV;gbkey=Gene;gene=pilV;gene_biotype=protein_coding;locus_tag=NDY24_01060 CP098602.1 Protein Homology CDS 220986 221462 . - 0 ID=cds-UUE98536.1;Parent=gene-NDY24_01060;Dbxref=NCBI_GP:UUE98536.1;Name=UUE98536.1;gbkey=CDS;gene=pilV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037628.1;locus_tag=NDY24_01060;product=type IV pilus modification protein PilV;protein_id=UUE98536.1;transl_table=11 CP098602.1 Genbank gene 221459 222004 . - . ID=gene-NDY24_01065;Name=NDY24_01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01065 CP098602.1 Protein Homology CDS 221459 222004 . - 0 ID=cds-UUE98537.1;Parent=gene-NDY24_01065;Dbxref=NCBI_GP:UUE98537.1;Name=UUE98537.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: protein motif:HMM:NF023444.2;locus_tag=NDY24_01065;product=GspH/FimT family pseudopilin;protein_id=UUE98537.1;transl_table=11 CP098602.1 Genbank gene 222118 223503 . - . ID=gene-NDY24_01070;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=NDY24_01070 CP098602.1 Protein Homology CDS 222118 223503 . - 0 ID=cds-UUE98538.1;Parent=gene-NDY24_01070;Dbxref=NCBI_GP:UUE98538.1;Name=UUE98538.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154671.1;locus_tag=NDY24_01070;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=UUE98538.1;transl_table=11 CP098602.1 Genbank pseudogene 223607 226818 . - . ID=gene-NDY24_01075;Name=NDY24_01075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_01075;pseudo=true CP098602.1 Protein Homology CDS 223607 226818 . - 0 ID=cds-NDY24_01075;Parent=gene-NDY24_01075;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167812.1;locus_tag=NDY24_01075;product=TonB-dependent receptor;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 227381 227981 . - . ID=gene-NDY24_01080;Name=NDY24_01080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_01080;pseudo=true CP098602.1 Protein Homology CDS 227381 227981 . - 0 ID=cds-NDY24_01080;Parent=gene-NDY24_01080;Note=frameshifted;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810180.1;locus_tag=NDY24_01080;product=YhgN family NAAT transporter;pseudo=true;transl_table=11 CP098602.1 Genbank gene 227978 228721 . - . ID=gene-NDY24_01085;Name=NDY24_01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01085 CP098602.1 Protein Homology CDS 227978 228721 . - 0 ID=cds-UUE98539.1;Parent=gene-NDY24_01085;Dbxref=NCBI_GP:UUE98539.1;Name=UUE98539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503773.1;locus_tag=NDY24_01085;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=UUE98539.1;transl_table=11 CP098602.1 Genbank gene 228718 229038 . - . ID=gene-NDY24_01090;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=NDY24_01090 CP098602.1 Protein Homology CDS 228718 229038 . - 0 ID=cds-UUE98540.1;Parent=gene-NDY24_01090;Dbxref=NCBI_GP:UUE98540.1;Name=UUE98540.1;Ontology_term=GO:0009055;gbkey=CDS;gene=grxD;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485599.1;locus_tag=NDY24_01090;product=Grx4 family monothiol glutaredoxin;protein_id=UUE98540.1;transl_table=11 CP098602.1 Genbank gene 229160 229738 . + . ID=gene-NDY24_01095;Name=NDY24_01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01095 CP098602.1 Protein Homology CDS 229160 229738 . + 0 ID=cds-UUE98541.1;Parent=gene-NDY24_01095;Dbxref=NCBI_GP:UUE98541.1;Name=UUE98541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259727.1;locus_tag=NDY24_01095;product=superoxide dismutase;protein_id=UUE98541.1;transl_table=11 CP098602.1 Genbank pseudogene 229792 230556 . - . ID=gene-NDY24_01100;Name=NDY24_01100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_01100;pseudo=true CP098602.1 Protein Homology CDS 229792 230556 . - 0 ID=cds-NDY24_01100;Parent=gene-NDY24_01100;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=NDY24_01100;product=IS5 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 230720 231865 . - . ID=gene-NDY24_01105;Name=NDY24_01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01105 CP098602.1 Protein Homology CDS 230720 231865 . - 0 ID=cds-UUE98542.1;Parent=gene-NDY24_01105;Dbxref=NCBI_GP:UUE98542.1;Name=UUE98542.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450541.1;locus_tag=NDY24_01105;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=UUE98542.1;transl_table=11 CP098602.1 Genbank gene 231862 232365 . - . ID=gene-NDY24_01110;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=NDY24_01110 CP098602.1 Protein Homology CDS 231862 232365 . - 0 ID=cds-UUE98543.1;Parent=gene-NDY24_01110;Dbxref=NCBI_GP:UUE98543.1;Name=UUE98543.1;Ontology_term=GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003468225.1;locus_tag=NDY24_01110;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=UUE98543.1;transl_table=11 CP098602.1 Genbank gene 232424 232693 . + . ID=gene-NDY24_01115;Name=NDY24_01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01115 CP098602.1 Protein Homology CDS 232424 232693 . + 0 ID=cds-UUE98544.1;Parent=gene-NDY24_01115;Dbxref=NCBI_GP:UUE98544.1;Name=UUE98544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008570984.1;locus_tag=NDY24_01115;product=Trm112 family protein;protein_id=UUE98544.1;transl_table=11 CP098602.1 Genbank pseudogene 232690 233568 . + . ID=gene-NDY24_01120;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=pseudogene;locus_tag=NDY24_01120;pseudo=true CP098602.1 Protein Homology CDS 232690 233568 . + 0 ID=cds-NDY24_01120;Parent=gene-NDY24_01120;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0019363,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=pyridine nucleotide biosynthetic process|0019363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158758.1;locus_tag=NDY24_01120;product=carboxylating nicotinate-nucleotide diphosphorylase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 233638 234690 . + . ID=gene-NDY24_01125;Name=NDY24_01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01125 CP098602.1 Protein Homology CDS 233638 234690 . + 0 ID=cds-UUF00241.1;Parent=gene-NDY24_01125;Dbxref=NCBI_GP:UUF00241.1;Name=UUF00241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920230.1;locus_tag=NDY24_01125;product=DUF2272 domain-containing protein;protein_id=UUF00241.1;transl_table=11 CP098602.1 Genbank gene 235201 237315 . - . ID=gene-NDY24_01130;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=NDY24_01130 CP098602.1 Protein Homology CDS 235201 237315 . - 0 ID=cds-UUE98545.1;Parent=gene-NDY24_01130;Dbxref=NCBI_GP:UUE98545.1;Name=UUE98545.1;Ontology_term=GO:0006402,GO:0004654;gbkey=CDS;gene=pnp;go_function=polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259733.1;locus_tag=NDY24_01130;product=polyribonucleotide nucleotidyltransferase;protein_id=UUE98545.1;transl_table=11 CP098602.1 Genbank gene 237484 237744 . - . ID=gene-NDY24_01135;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=NDY24_01135 CP098602.1 Protein Homology CDS 237484 237744 . - 0 ID=cds-UUE98546.1;Parent=gene-NDY24_01135;Dbxref=NCBI_GP:UUE98546.1;Name=UUE98546.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810194.1;locus_tag=NDY24_01135;product=30S ribosomal protein S15;protein_id=UUE98546.1;transl_table=11 CP098602.1 Genbank gene 237901 238827 . - . ID=gene-NDY24_01140;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=NDY24_01140 CP098602.1 Protein Homology CDS 237901 238827 . - 0 ID=cds-UUE98547.1;Parent=gene-NDY24_01140;Dbxref=NCBI_GP:UUE98547.1;Name=UUE98547.1;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016848688.1;locus_tag=NDY24_01140;product=tRNA pseudouridine(55) synthase TruB;protein_id=UUE98547.1;transl_table=11 CP098602.1 Genbank gene 238910 239302 . - . ID=gene-NDY24_01145;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=NDY24_01145 CP098602.1 Protein Homology CDS 238910 239302 . - 0 ID=cds-UUE98548.1;Parent=gene-NDY24_01145;Dbxref=NCBI_GP:UUE98548.1;Name=UUE98548.1;Ontology_term=GO:0006396,GO:0019843;gbkey=CDS;gene=rbfA;go_function=rRNA binding|0019843||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051765.1;locus_tag=NDY24_01145;product=30S ribosome-binding factor RbfA;protein_id=UUE98548.1;transl_table=11 CP098602.1 Genbank gene 239476 242187 . - . ID=gene-NDY24_01150;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=NDY24_01150 CP098602.1 Protein Homology CDS 239476 242187 . - 0 ID=cds-UUE98549.1;Parent=gene-NDY24_01150;Dbxref=NCBI_GP:UUE98549.1;Name=UUE98549.1;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159225.1;locus_tag=NDY24_01150;product=translation initiation factor IF-2;protein_id=UUE98549.1;transl_table=11 CP098602.1 Genbank gene 242283 243794 . - . ID=gene-NDY24_01155;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=NDY24_01155 CP098602.1 Protein Homology CDS 242283 243794 . - 0 ID=cds-UUE98550.1;Parent=gene-NDY24_01155;Dbxref=NCBI_GP:UUE98550.1;Name=UUE98550.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription%2C termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660577.1;locus_tag=NDY24_01155;product=transcription termination factor NusA;protein_id=UUE98550.1;transl_table=11 CP098602.1 Genbank gene 243799 244389 . - . ID=gene-NDY24_01160;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=NDY24_01160 CP098602.1 Protein Homology CDS 243799 244389 . - 0 ID=cds-UUE98551.1;Parent=gene-NDY24_01160;Dbxref=NCBI_GP:UUE98551.1;Name=UUE98551.1;gbkey=CDS;gene=rimP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300413.1;locus_tag=NDY24_01160;product=ribosome maturation factor RimP;protein_id=UUE98551.1;transl_table=11 CP098602.1 Genbank gene 244601 244677 . - . ID=gene-NDY24_01165;Name=NDY24_01165;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_01165 CP098602.1 tRNAscan-SE tRNA 244601 244677 . - . ID=rna-NDY24_01165;Parent=gene-NDY24_01165;anticodon=(pos:complement(244641..244643));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_01165;product=tRNA-Met CP098602.1 tRNAscan-SE exon 244601 244677 . - . ID=exon-NDY24_01165-1;Parent=rna-NDY24_01165;anticodon=(pos:complement(244641..244643));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_01165;product=tRNA-Met CP098602.1 Genbank gene 244881 246341 . - . ID=gene-NDY24_01170;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=NDY24_01170 CP098602.1 Protein Homology CDS 244881 246341 . - 0 ID=cds-UUE98552.1;Parent=gene-NDY24_01170;Dbxref=NCBI_GP:UUE98552.1;Name=UUE98552.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485567.1;locus_tag=NDY24_01170;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=UUE98552.1;transl_table=11 CP098602.1 Genbank gene 246378 247880 . - . ID=gene-NDY24_01175;Name=NDY24_01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01175 CP098602.1 Protein Homology CDS 246378 247880 . - 0 ID=cds-UUE98553.1;Parent=gene-NDY24_01175;Dbxref=NCBI_GP:UUE98553.1;Name=UUE98553.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300411.1;locus_tag=NDY24_01175;product=NADH-quinone oxidoreductase subunit M;protein_id=UUE98553.1;transl_table=11 CP098602.1 Genbank gene 247901 250057 . - . ID=gene-NDY24_01180;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=NDY24_01180 CP098602.1 Protein Homology CDS 247901 250057 . - 0 ID=cds-UUE98554.1;Parent=gene-NDY24_01180;Dbxref=NCBI_GP:UUE98554.1;Name=UUE98554.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485563.1;locus_tag=NDY24_01180;product=NADH-quinone oxidoreductase subunit L;protein_id=UUE98554.1;transl_table=11 CP098602.1 Genbank gene 250065 250370 . - . ID=gene-NDY24_01185;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=NDY24_01185 CP098602.1 Protein Homology CDS 250065 250370 . - 0 ID=cds-UUE98555.1;Parent=gene-NDY24_01185;Dbxref=NCBI_GP:UUE98555.1;Name=UUE98555.1;gbkey=CDS;gene=nuoK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450557.1;locus_tag=NDY24_01185;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=UUE98555.1;transl_table=11 CP098602.1 Genbank gene 250367 251029 . - . ID=gene-NDY24_01190;Name=NDY24_01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01190 CP098602.1 Protein Homology CDS 250367 251029 . - 0 ID=cds-UUF00242.1;Parent=gene-NDY24_01190;Dbxref=NCBI_GP:UUF00242.1;Name=UUF00242.1;Ontology_term=GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237526.1;locus_tag=NDY24_01190;product=NADH-quinone oxidoreductase subunit J;protein_id=UUF00242.1;transl_table=11 CP098602.1 Genbank gene 251034 251522 . - . ID=gene-NDY24_01195;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=NDY24_01195 CP098602.1 Protein Homology CDS 251034 251522 . - 0 ID=cds-UUE98556.1;Parent=gene-NDY24_01195;Dbxref=NCBI_GP:UUE98556.1;Name=UUE98556.1;Ontology_term=GO:0016651,GO:0051539;gbkey=CDS;gene=nuoI;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927506.1;locus_tag=NDY24_01195;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=UUE98556.1;transl_table=11 CP098602.1 Genbank gene 251526 252620 . - . ID=gene-NDY24_01200;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=NDY24_01200 CP098602.1 Protein Homology CDS 251526 252620 . - 0 ID=cds-UUE98557.1;Parent=gene-NDY24_01200;Dbxref=NCBI_GP:UUE98557.1;Name=UUE98557.1;Ontology_term=GO:0016020;gbkey=CDS;gene=nuoH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010375869.1;locus_tag=NDY24_01200;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=UUE98557.1;transl_table=11 CP098602.1 Genbank gene 252617 254851 . - . ID=gene-NDY24_01205;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=NDY24_01205 CP098602.1 Protein Homology CDS 252617 254851 . - 0 ID=cds-UUE98558.1;Parent=gene-NDY24_01205;Dbxref=NCBI_GP:UUE98558.1;Name=UUE98558.1;Ontology_term=GO:0006120,GO:0050136;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) activity|0050136||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347938.1;locus_tag=NDY24_01205;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=UUE98558.1;transl_table=11 CP098602.1 Genbank gene 254848 256182 . - . ID=gene-NDY24_01210;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=NDY24_01210 CP098602.1 Protein Homology CDS 254848 256182 . - 0 ID=cds-UUE98559.1;Parent=gene-NDY24_01210;Dbxref=NCBI_GP:UUE98559.1;Name=UUE98559.1;Ontology_term=GO:0050136;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (quinone) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503795.1;locus_tag=NDY24_01210;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=UUE98559.1;transl_table=11 CP098602.1 Genbank gene 256186 256713 . - . ID=gene-NDY24_01215;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=NDY24_01215 CP098602.1 Protein Homology CDS 256186 256713 . - 0 ID=cds-UUE98560.1;Parent=gene-NDY24_01215;Dbxref=NCBI_GP:UUE98560.1;Name=UUE98560.1;gbkey=CDS;gene=nuoE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005410460.1;locus_tag=NDY24_01215;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=UUE98560.1;transl_table=11 CP098602.1 Genbank gene 256710 258017 . - . ID=gene-NDY24_01220;Name=NDY24_01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01220 CP098602.1 Protein Homology CDS 256710 258017 . - 0 ID=cds-UUE98561.1;Parent=gene-NDY24_01220;Dbxref=NCBI_GP:UUE98561.1;Name=UUE98561.1;Ontology_term=GO:0016651,GO:0048038,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,quinone binding|0048038||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810223.1;locus_tag=NDY24_01220;product=NADH-quinone oxidoreductase subunit D;protein_id=UUE98561.1;transl_table=11 CP098602.1 Genbank gene 258014 258766 . - . ID=gene-NDY24_01225;Name=NDY24_01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01225 CP098602.1 Protein Homology CDS 258014 258766 . - 0 ID=cds-UUE98562.1;Parent=gene-NDY24_01225;Dbxref=NCBI_GP:UUE98562.1;Name=UUE98562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927494.1;locus_tag=NDY24_01225;product=NADH-quinone oxidoreductase subunit C;protein_id=UUE98562.1;transl_table=11 CP098602.1 Genbank gene 258803 259357 . - . ID=gene-NDY24_01230;Name=NDY24_01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01230 CP098602.1 Protein Homology CDS 258803 259357 . - 0 ID=cds-UUE98563.1;Parent=gene-NDY24_01230;Dbxref=NCBI_GP:UUE98563.1;Name=UUE98563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914280.1;locus_tag=NDY24_01230;product=NADH-quinone oxidoreductase subunit B;protein_id=UUE98563.1;transl_table=11 CP098602.1 Genbank gene 259348 259704 . - . ID=gene-NDY24_01235;Name=NDY24_01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01235 CP098602.1 Protein Homology CDS 259348 259704 . - 0 ID=cds-UUE98564.1;Parent=gene-NDY24_01235;Dbxref=NCBI_GP:UUE98564.1;Name=UUE98564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003467430.1;locus_tag=NDY24_01235;product=NADH-quinone oxidoreductase subunit A;protein_id=UUE98564.1;transl_table=11 CP098602.1 Genbank gene 259811 259895 . - . ID=gene-NDY24_01240;Name=NDY24_01240;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_01240 CP098602.1 tRNAscan-SE tRNA 259811 259895 . - . ID=rna-NDY24_01240;Parent=gene-NDY24_01240;anticodon=(pos:complement(259859..259861));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_01240;product=tRNA-Leu CP098602.1 tRNAscan-SE exon 259811 259895 . - . ID=exon-NDY24_01240-1;Parent=rna-NDY24_01240;anticodon=(pos:complement(259859..259861));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_01240;product=tRNA-Leu CP098602.1 Genbank gene 259945 260418 . - . ID=gene-NDY24_01245;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=NDY24_01245 CP098602.1 Protein Homology CDS 259945 260418 . - 0 ID=cds-UUE98565.1;Parent=gene-NDY24_01245;Dbxref=NCBI_GP:UUE98565.1;Name=UUE98565.1;Ontology_term=GO:0043952,GO:0015450,GO:0005887;gbkey=CDS;gene=secG;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008570967.1;locus_tag=NDY24_01245;product=preprotein translocase subunit SecG;protein_id=UUE98565.1;transl_table=11 CP098602.1 Genbank gene 260452 261207 . - . ID=gene-NDY24_01250;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=NDY24_01250 CP098602.1 Protein Homology CDS 260452 261207 . - 0 ID=cds-UUE98566.1;Parent=gene-NDY24_01250;Dbxref=NCBI_GP:UUE98566.1;Name=UUE98566.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156090.1;locus_tag=NDY24_01250;product=triose-phosphate isomerase;protein_id=UUE98566.1;transl_table=11 CP098602.1 Genbank gene 261320 262120 . + . ID=gene-NDY24_01255;Name=NDY24_01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01255 CP098602.1 Protein Homology CDS 261320 262120 . + 0 ID=cds-UUE98567.1;Parent=gene-NDY24_01255;Dbxref=NCBI_GP:UUE98567.1;Name=UUE98567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008570965.1;locus_tag=NDY24_01255;product=SDR family oxidoreductase;protein_id=UUE98567.1;transl_table=11 CP098602.1 Genbank gene 262193 262621 . - . ID=gene-NDY24_01260;Name=NDY24_01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01260 CP098602.1 Protein Homology CDS 262193 262621 . - 0 ID=cds-UUE98568.1;Parent=gene-NDY24_01260;Dbxref=NCBI_GP:UUE98568.1;Name=UUE98568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810241.1;locus_tag=NDY24_01260;product=group 1 truncated hemoglobin;protein_id=UUE98568.1;transl_table=11 CP098602.1 Genbank gene 262621 263496 . - . ID=gene-NDY24_01265;Name=NDY24_01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01265 CP098602.1 Protein Homology CDS 262621 263496 . - 0 ID=cds-UUE98569.1;Parent=gene-NDY24_01265;Dbxref=NCBI_GP:UUE98569.1;Name=UUE98569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156087.1;locus_tag=NDY24_01265;product=DUF3034 family protein;protein_id=UUE98569.1;transl_table=11 CP098602.1 Genbank gene 263493 265877 . - . ID=gene-NDY24_01270;Name=NDY24_01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01270 CP098602.1 Protein Homology CDS 263493 265877 . - 0 ID=cds-UUE98570.1;Parent=gene-NDY24_01270;Dbxref=NCBI_GP:UUE98570.1;Name=UUE98570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450574.1;locus_tag=NDY24_01270;product=EAL domain-containing protein;protein_id=UUE98570.1;transl_table=11 CP098602.1 Genbank gene 265874 266563 . - . ID=gene-NDY24_01275;Name=NDY24_01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01275 CP098602.1 Protein Homology CDS 265874 266563 . - 0 ID=cds-UUE98571.1;Parent=gene-NDY24_01275;Dbxref=NCBI_GP:UUE98571.1;Name=UUE98571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902986.1;locus_tag=NDY24_01275;product=methylamine utilization protein;protein_id=UUE98571.1;transl_table=11 CP098602.1 Genbank gene 266769 267707 . - . ID=gene-NDY24_01280;Name=NDY24_01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01280 CP098602.1 Protein Homology CDS 266769 267707 . - 0 ID=cds-UUE98572.1;Parent=gene-NDY24_01280;Dbxref=NCBI_GP:UUE98572.1;Name=UUE98572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485523.1;locus_tag=NDY24_01280;product=isopenicillin N synthase family oxygenase;protein_id=UUE98572.1;transl_table=11 CP098602.1 Genbank gene 267832 269181 . - . ID=gene-NDY24_01285;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=NDY24_01285 CP098602.1 Protein Homology CDS 267832 269181 . - 0 ID=cds-UUE98573.1;Parent=gene-NDY24_01285;Dbxref=NCBI_GP:UUE98573.1;Name=UUE98573.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular transferase activity%2C phosphotransferases|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300396.1;locus_tag=NDY24_01285;product=phosphoglucosamine mutase;protein_id=UUE98573.1;transl_table=11 CP098602.1 Genbank gene 269309 270193 . - . ID=gene-NDY24_01290;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=NDY24_01290 CP098602.1 Protein Homology CDS 269309 270193 . - 0 ID=cds-UUE98574.1;Parent=gene-NDY24_01290;Dbxref=NCBI_GP:UUE98574.1;Name=UUE98574.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810266.1;locus_tag=NDY24_01290;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=UUE98574.1;transl_table=11 CP098602.1 Genbank gene 270574 271380 . - . ID=gene-NDY24_01295;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=NDY24_01295 CP098602.1 Protein Homology CDS 270574 271380 . - 0 ID=cds-UUE98575.1;Parent=gene-NDY24_01295;Dbxref=NCBI_GP:UUE98575.1;Name=UUE98575.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156349.1;locus_tag=NDY24_01295;product=tryptophan synthase subunit alpha;protein_id=UUE98575.1;transl_table=11 CP098602.1 Genbank gene 271419 271628 . - . ID=gene-NDY24_01300;Name=NDY24_01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01300 CP098602.1 GeneMarkS-2+ CDS 271419 271628 . - 0 ID=cds-UUE98576.1;Parent=gene-NDY24_01300;Dbxref=NCBI_GP:UUE98576.1;Name=UUE98576.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_01300;product=hypothetical protein;protein_id=UUE98576.1;transl_table=11 CP098602.1 Genbank gene 271628 272845 . - . ID=gene-NDY24_01305;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=NDY24_01305 CP098602.1 Protein Homology CDS 271628 272845 . - 0 ID=cds-UUE98577.1;Parent=gene-NDY24_01305;Dbxref=NCBI_GP:UUE98577.1;Name=UUE98577.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914297.1;locus_tag=NDY24_01305;product=tryptophan synthase subunit beta;protein_id=UUE98577.1;transl_table=11 CP098602.1 Genbank gene 272954 273883 . + . ID=gene-NDY24_01310;Name=NDY24_01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01310 CP098602.1 Protein Homology CDS 272954 273883 . + 0 ID=cds-UUE98578.1;Parent=gene-NDY24_01310;Dbxref=NCBI_GP:UUE98578.1;Name=UUE98578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162800.1;locus_tag=NDY24_01310;product=LysR family transcriptional regulator;protein_id=UUE98578.1;transl_table=11 CP098602.1 Genbank gene 274055 274723 . - . ID=gene-NDY24_01315;Name=NDY24_01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01315 CP098602.1 Protein Homology CDS 274055 274723 . - 0 ID=cds-UUE98579.1;Parent=gene-NDY24_01315;Dbxref=NCBI_GP:UUE98579.1;Name=UUE98579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159966.1;locus_tag=NDY24_01315;product=phosphoribosylanthranilate isomerase;protein_id=UUE98579.1;transl_table=11 CP098602.1 Genbank gene 274720 275493 . - . ID=gene-NDY24_01320;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=NDY24_01320 CP098602.1 Protein Homology CDS 274720 275493 . - 0 ID=cds-UUE98580.1;Parent=gene-NDY24_01320;Dbxref=NCBI_GP:UUE98580.1;Name=UUE98580.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304909.1;locus_tag=NDY24_01320;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=UUE98580.1;transl_table=11 CP098602.1 Genbank gene 275666 276073 . - . ID=gene-NDY24_01325;Name=NDY24_01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01325 CP098602.1 Protein Homology CDS 275666 276073 . - 0 ID=cds-UUE98581.1;Parent=gene-NDY24_01325;Dbxref=NCBI_GP:UUE98581.1;Name=UUE98581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379378.1;locus_tag=NDY24_01325;product=VOC family protein;protein_id=UUE98581.1;transl_table=11 CP098602.1 Genbank pseudogene 276070 277995 . - . ID=gene-NDY24_01330;Name=NDY24_01330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_01330;pseudo=true CP098602.1 Protein Homology CDS 276070 277995 . - 0 ID=cds-NDY24_01330;Parent=gene-NDY24_01330;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810305.1;locus_tag=NDY24_01330;product=ferrous iron transporter B;pseudo=true;transl_table=11 CP098602.1 Genbank gene 278290 279279 . - . ID=gene-NDY24_01335;Name=NDY24_01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01335 CP098602.1 Protein Homology CDS 278290 279279 . - 0 ID=cds-UUE98582.1;Parent=gene-NDY24_01335;Dbxref=NCBI_GP:UUE98582.1;Name=UUE98582.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=cellular amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010340528.1;locus_tag=NDY24_01335;product=aspartate-semialdehyde dehydrogenase;protein_id=UUE98582.1;transl_table=11 CP098602.1 Genbank gene 279402 280490 . - . ID=gene-NDY24_01340;Name=NDY24_01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01340 CP098602.1 Protein Homology CDS 279402 280490 . - 0 ID=cds-UUE98583.1;Parent=gene-NDY24_01340;Dbxref=NCBI_GP:UUE98583.1;Name=UUE98583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379384.1;locus_tag=NDY24_01340;product=D-glycerate dehydrogenase;protein_id=UUE98583.1;transl_table=11 CP098602.1 Genbank gene 280483 281586 . - . ID=gene-NDY24_01345;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=NDY24_01345 CP098602.1 Protein Homology CDS 280483 281586 . - 0 ID=cds-UUE98584.1;Parent=gene-NDY24_01345;Dbxref=NCBI_GP:UUE98584.1;Name=UUE98584.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914304.1;locus_tag=NDY24_01345;product=chorismate synthase;protein_id=UUE98584.1;transl_table=11 CP098602.1 Genbank pseudogene 282057 282980 . - . ID=gene-NDY24_01350;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=pseudogene;locus_tag=NDY24_01350;pseudo=true CP098602.1 Protein Homology CDS 282057 282980 . - 0 ID=cds-NDY24_01350;Parent=gene-NDY24_01350;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927455.1;locus_tag=NDY24_01350;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 283061 283711 . + . ID=gene-NDY24_01355;Name=NDY24_01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01355 CP098602.1 Protein Homology CDS 283061 283711 . + 0 ID=cds-UUE98585.1;Parent=gene-NDY24_01355;Dbxref=NCBI_GP:UUE98585.1;Name=UUE98585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302734.1;locus_tag=NDY24_01355;product=SCO family protein;protein_id=UUE98585.1;transl_table=11 CP098602.1 Genbank pseudogene 283708 284539 . + . ID=gene-NDY24_01360;Name=asd;gbkey=Gene;gene=asd;gene_biotype=pseudogene;locus_tag=NDY24_01360;pseudo=true CP098602.1 Protein Homology CDS 283708 284539 . + 0 ID=cds-NDY24_01360;Parent=gene-NDY24_01360;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.%3B frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347956.1;locus_tag=NDY24_01360;product=archaetidylserine decarboxylase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 285058 286641 . - . ID=gene-NDY24_01365;Name=NDY24_01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01365 CP098602.1 Protein Homology CDS 285058 286641 . - 0 ID=cds-UUE98586.1;Parent=gene-NDY24_01365;Dbxref=NCBI_GP:UUE98586.1;Name=UUE98586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914309.1;locus_tag=NDY24_01365;product=transglycosylase SLT domain-containing protein;protein_id=UUE98586.1;transl_table=11 CP098602.1 Genbank gene 286935 288479 . + . ID=gene-NDY24_01370;Name=NDY24_01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01370 CP098602.1 Protein Homology CDS 286935 288479 . + 0 ID=cds-UUE98587.1;Parent=gene-NDY24_01370;Dbxref=NCBI_GP:UUE98587.1;Name=UUE98587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347958.1;locus_tag=NDY24_01370;product=DUF853 domain-containing protein;protein_id=UUE98587.1;transl_table=11 CP098602.1 Genbank gene 288476 289003 . + . ID=gene-NDY24_01375;Name=NDY24_01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01375 CP098602.1 Protein Homology CDS 288476 289003 . + 0 ID=cds-UUE98588.1;Parent=gene-NDY24_01375;Dbxref=NCBI_GP:UUE98588.1;Name=UUE98588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437940.1;locus_tag=NDY24_01375;product=hypothetical protein;protein_id=UUE98588.1;transl_table=11 CP098602.1 Genbank gene 289241 289840 . - . ID=gene-NDY24_01380;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=NDY24_01380 CP098602.1 Protein Homology CDS 289241 289840 . - 0 ID=cds-UUE98589.1;Parent=gene-NDY24_01380;Dbxref=NCBI_GP:UUE98589.1;Name=UUE98589.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903706.1;locus_tag=NDY24_01380;product=GDP-mannose pyrophosphatase NudK;protein_id=UUE98589.1;transl_table=11 CP098602.1 Genbank gene 290457 291731 . + . ID=gene-NDY24_01385;Name=NDY24_01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01385 CP098602.1 Protein Homology CDS 290457 291731 . + 0 ID=cds-UUE98590.1;Parent=gene-NDY24_01385;Dbxref=NCBI_GP:UUE98590.1;Name=UUE98590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005991301.1;locus_tag=NDY24_01385;product=hypothetical protein;protein_id=UUE98590.1;transl_table=11 CP098602.1 Genbank gene 292319 293785 . - . ID=gene-NDY24_01390;Name=NDY24_01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01390 CP098602.1 Protein Homology CDS 292319 293785 . - 0 ID=cds-UUE98591.1;Parent=gene-NDY24_01390;Dbxref=NCBI_GP:UUE98591.1;Name=UUE98591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156366.1;locus_tag=NDY24_01390;product=rhomboid family intramembrane serine protease;protein_id=UUE98591.1;transl_table=11 CP098602.1 Genbank pseudogene 293890 294395 . + . ID=gene-NDY24_01395;Name=greB;gbkey=Gene;gene=greB;gene_biotype=pseudogene;locus_tag=NDY24_01395;pseudo=true CP098602.1 Protein Homology CDS 293890 294395 . + 0 ID=cds-NDY24_01395;Parent=gene-NDY24_01395;Note=frameshifted;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription%2C elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409076.1;locus_tag=NDY24_01395;product=transcription elongation factor GreB;pseudo=true;transl_table=11 CP098602.1 Genbank gene 294513 295886 . - . ID=gene-NDY24_01400;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=NDY24_01400 CP098602.1 Protein Homology CDS 294513 295886 . - 0 ID=cds-UUE98592.1;Parent=gene-NDY24_01400;Dbxref=NCBI_GP:UUE98592.1;Name=UUE98592.1;Ontology_term=GO:0018339,GO:0008172,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=rimO;go_function=S-methyltransferase activity|0008172||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037694.1;locus_tag=NDY24_01400;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=UUE98592.1;transl_table=11 CP098602.1 Genbank gene 296070 296732 . + . ID=gene-NDY24_01405;Name=NDY24_01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01405 CP098602.1 Protein Homology CDS 296070 296732 . + 0 ID=cds-UUE98593.1;Parent=gene-NDY24_01405;Dbxref=NCBI_GP:UUE98593.1;Name=UUE98593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302061.1;locus_tag=NDY24_01405;product=dienelactone hydrolase family protein;protein_id=UUE98593.1;transl_table=11 CP098602.1 Genbank gene 296729 297181 . + . ID=gene-NDY24_01410;Name=NDY24_01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01410 CP098602.1 Protein Homology CDS 296729 297181 . + 0 ID=cds-UUE98594.1;Parent=gene-NDY24_01410;Dbxref=NCBI_GP:UUE98594.1;Name=UUE98594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037697.1;locus_tag=NDY24_01410;product=HIT family protein;protein_id=UUE98594.1;transl_table=11 CP098602.1 Genbank gene 297209 297376 . + . ID=gene-NDY24_01415;Name=NDY24_01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01415 CP098602.1 Protein Homology CDS 297209 297376 . + 0 ID=cds-UUE98595.1;Parent=gene-NDY24_01415;Dbxref=NCBI_GP:UUE98595.1;Name=UUE98595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994260.1;locus_tag=NDY24_01415;product=DUF5668 domain-containing protein;protein_id=UUE98595.1;transl_table=11 CP098602.1 Genbank pseudogene 297723 297890 . + . ID=gene-NDY24_01420;Name=NDY24_01420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_01420;pseudo=true CP098602.1 Protein Homology CDS 297723 297890 . + 0 ID=cds-NDY24_01420;Parent=gene-NDY24_01420;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486896.1;locus_tag=NDY24_01420;product=DUF5668 domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 297938 298507 . - . ID=gene-NDY24_01425;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=NDY24_01425 CP098602.1 Protein Homology CDS 297938 298507 . - 0 ID=cds-UUE98596.1;Parent=gene-NDY24_01425;Dbxref=NCBI_GP:UUE98596.1;Name=UUE98596.1;Ontology_term=GO:0009394,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=2'-deoxyribonucleotide metabolic process|0009394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912996.1;locus_tag=NDY24_01425;product=dCTP deaminase;protein_id=UUE98596.1;transl_table=11 CP098602.1 Genbank gene 298604 299455 . - . ID=gene-NDY24_01430;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=NDY24_01430 CP098602.1 Protein Homology CDS 298604 299455 . - 0 ID=cds-UUE98597.1;Parent=gene-NDY24_01430;Dbxref=NCBI_GP:UUE98597.1;Name=UUE98597.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156372.1;locus_tag=NDY24_01430;product=iron-sulfur cluster carrier protein ApbC;protein_id=UUE98597.1;transl_table=11 CP098602.1 Genbank gene 299793 302783 . + . ID=gene-NDY24_01435;Name=NDY24_01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01435 CP098602.1 Protein Homology CDS 299793 302783 . + 0 ID=cds-UUE98598.1;Parent=gene-NDY24_01435;Dbxref=NCBI_GP:UUE98598.1;Name=UUE98598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366729.1;locus_tag=NDY24_01435;product=TonB-dependent receptor;protein_id=UUE98598.1;transl_table=11 CP098602.1 Genbank gene 303159 306233 . + . ID=gene-NDY24_01440;Name=NDY24_01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01440 CP098602.1 Protein Homology CDS 303159 306233 . + 0 ID=cds-UUE98599.1;Parent=gene-NDY24_01440;Dbxref=NCBI_GP:UUE98599.1;Name=UUE98599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090548.1;locus_tag=NDY24_01440;product=TonB-dependent receptor;protein_id=UUE98599.1;transl_table=11 CP098602.1 Genbank pseudogene 306353 307936 . - . ID=gene-NDY24_01445;Name=NDY24_01445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_01445;pseudo=true CP098602.1 Protein Homology CDS 306353 307936 . - 0 ID=cds-NDY24_01445;Parent=gene-NDY24_01445;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156375.1;locus_tag=NDY24_01445;product=NAD(P)/FAD-dependent oxidoreductase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 308307 310409 . + . ID=gene-NDY24_01450;Name=NDY24_01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01450 CP098602.1 Protein Homology CDS 308307 310409 . + 0 ID=cds-UUF00243.1;Parent=gene-NDY24_01450;Dbxref=NCBI_GP:UUF00243.1;Name=UUF00243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486886.1;locus_tag=NDY24_01450;product=peptidase;protein_id=UUF00243.1;transl_table=11 CP098602.1 Genbank gene 310734 312830 . + . ID=gene-NDY24_01455;Name=NDY24_01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01455 CP098602.1 Protein Homology CDS 310734 312830 . + 0 ID=cds-UUE98600.1;Parent=gene-NDY24_01455;Dbxref=NCBI_GP:UUE98600.1;Name=UUE98600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304384.1;locus_tag=NDY24_01455;product=M13 family metallopeptidase;protein_id=UUE98600.1;transl_table=11 CP098602.1 Genbank gene 313015 315027 . + . ID=gene-NDY24_01460;Name=NDY24_01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01460 CP098602.1 Protein Homology CDS 313015 315027 . + 0 ID=cds-UUE98601.1;Parent=gene-NDY24_01460;Dbxref=NCBI_GP:UUE98601.1;Name=UUE98601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007969573.1;locus_tag=NDY24_01460;product=M13 family metallopeptidase;protein_id=UUE98601.1;transl_table=11 CP098602.1 Genbank gene 315257 315943 . - . ID=gene-NDY24_01465;Name=NDY24_01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01465 CP098602.1 Protein Homology CDS 315257 315943 . - 0 ID=cds-UUE98602.1;Parent=gene-NDY24_01465;Dbxref=NCBI_GP:UUE98602.1;Name=UUE98602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169516.1;locus_tag=NDY24_01465;product=rhomboid family intramembrane serine protease;protein_id=UUE98602.1;transl_table=11 CP098602.1 Genbank gene 315984 316391 . - . ID=gene-NDY24_01470;Name=NDY24_01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01470 CP098602.1 Protein Homology CDS 315984 316391 . - 0 ID=cds-UUE98603.1;Parent=gene-NDY24_01470;Dbxref=NCBI_GP:UUE98603.1;Name=UUE98603.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051802.1;locus_tag=NDY24_01470;product=MGMT family protein;protein_id=UUE98603.1;transl_table=11 CP098602.1 Genbank gene 316669 318039 . - . ID=gene-NDY24_01475;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=NDY24_01475 CP098602.1 Protein Homology CDS 316669 318039 . - 0 ID=cds-UUE98604.1;Parent=gene-NDY24_01475;Dbxref=NCBI_GP:UUE98604.1;Name=UUE98604.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486876.1;locus_tag=NDY24_01475;product=glutathione-disulfide reductase;protein_id=UUE98604.1;transl_table=11 CP098602.1 Genbank pseudogene 318036 318176 . - . ID=gene-NDY24_01480;Name=NDY24_01480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_01480;pseudo=true CP098602.1 Protein Homology CDS 318036 318176 . - 0 ID=cds-NDY24_01480;Parent=gene-NDY24_01480;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016848650.1;locus_tag=NDY24_01480;product=amino acid dehydrogenase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 318382 319626 . - . ID=gene-NDY24_01485;Name=NDY24_01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01485 CP098602.1 Protein Homology CDS 318382 319626 . - 0 ID=cds-UUF00244.1;Parent=gene-NDY24_01485;Dbxref=NCBI_GP:UUF00244.1;Name=UUF00244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449969.1;locus_tag=NDY24_01485;product=DUF418 domain-containing protein;protein_id=UUF00244.1;transl_table=11 CP098602.1 Genbank gene 319850 320329 . - . ID=gene-NDY24_01490;Name=NDY24_01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01490 CP098602.1 Protein Homology CDS 319850 320329 . - 0 ID=cds-UUE98605.1;Parent=gene-NDY24_01490;Dbxref=NCBI_GP:UUE98605.1;Name=UUE98605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903985.1;locus_tag=NDY24_01490;product=peptidylprolyl isomerase;protein_id=UUE98605.1;transl_table=11 CP098602.1 Genbank pseudogene 320328 320985 . + . ID=gene-NDY24_01495;Name=NDY24_01495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_01495;pseudo=true CP098602.1 Protein Homology CDS 320328 320985 . + 0 ID=cds-NDY24_01495;Parent=gene-NDY24_01495;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007970776.1;locus_tag=NDY24_01495;product=C40 family peptidase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 321095 321844 . + . ID=gene-NDY24_01500;Name=NDY24_01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01500 CP098602.1 Protein Homology CDS 321095 321844 . + 0 ID=cds-UUE98606.1;Parent=gene-NDY24_01500;Dbxref=NCBI_GP:UUE98606.1;Name=UUE98606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437923.1;locus_tag=NDY24_01500;product=C40 family peptidase;protein_id=UUE98606.1;transl_table=11 CP098602.1 Genbank gene 322636 323151 . + . ID=gene-NDY24_01505;Name=NDY24_01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01505 CP098602.1 Protein Homology CDS 322636 323151 . + 0 ID=cds-UUE98607.1;Parent=gene-NDY24_01505;Dbxref=NCBI_GP:UUE98607.1;Name=UUE98607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994290.1;locus_tag=NDY24_01505;product=DUF4956 domain-containing protein;protein_id=UUE98607.1;transl_table=11 CP098602.1 Genbank gene 323225 324067 . + . ID=gene-NDY24_01510;Name=NDY24_01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01510 CP098602.1 Protein Homology CDS 323225 324067 . + 0 ID=cds-UUE98608.1;Parent=gene-NDY24_01510;Dbxref=NCBI_GP:UUE98608.1;Name=UUE98608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437920.1;locus_tag=NDY24_01510;product=polyphosphate polymerase domain-containing protein;protein_id=UUE98608.1;transl_table=11 CP098602.1 Genbank gene 324135 325112 . + . ID=gene-NDY24_01515;Name=NDY24_01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01515 CP098602.1 Protein Homology CDS 324135 325112 . + 0 ID=cds-UUE98609.1;Parent=gene-NDY24_01515;Dbxref=NCBI_GP:UUE98609.1;Name=UUE98609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994292.1;locus_tag=NDY24_01515;product=esterase-like activity of phytase family protein;protein_id=UUE98609.1;transl_table=11 CP098602.1 Genbank gene 325144 326277 . + . ID=gene-NDY24_01520;Name=NDY24_01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01520 CP098602.1 Protein Homology CDS 325144 326277 . + 0 ID=cds-UUE98610.1;Parent=gene-NDY24_01520;Dbxref=NCBI_GP:UUE98610.1;Name=UUE98610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269626.1;locus_tag=NDY24_01520;product=OprO/OprP family phosphate-selective porin;protein_id=UUE98610.1;transl_table=11 CP098602.1 Genbank gene 326308 327666 . + . ID=gene-NDY24_01525;Name=NDY24_01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01525 CP098602.1 Protein Homology CDS 326308 327666 . + 0 ID=cds-UUE98611.1;Parent=gene-NDY24_01525;Dbxref=NCBI_GP:UUE98611.1;Name=UUE98611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437917.1;locus_tag=NDY24_01525;product=sigma-54 dependent transcriptional regulator;protein_id=UUE98611.1;transl_table=11 CP098602.1 Genbank gene 327728 329665 . + . ID=gene-NDY24_01530;Name=NDY24_01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01530 CP098602.1 Protein Homology CDS 327728 329665 . + 0 ID=cds-UUE98612.1;Parent=gene-NDY24_01530;Dbxref=NCBI_GP:UUE98612.1;Name=UUE98612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237496.1;locus_tag=NDY24_01530;product=ATP-binding protein;protein_id=UUE98612.1;transl_table=11 CP098602.1 Genbank gene 329791 330282 . - . ID=gene-NDY24_01535;Name=NDY24_01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01535 CP098602.1 Protein Homology CDS 329791 330282 . - 0 ID=cds-UUE98613.1;Parent=gene-NDY24_01535;Dbxref=NCBI_GP:UUE98613.1;Name=UUE98613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449965.1;locus_tag=NDY24_01535;product=acyl-CoA thioesterase;protein_id=UUE98613.1;transl_table=11 CP098602.1 Genbank pseudogene 330372 331208 . - . ID=gene-NDY24_01540;Name=NDY24_01540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_01540;pseudo=true CP098602.1 Protein Homology CDS 330372 331208 . - 0 ID=cds-NDY24_01540;Parent=gene-NDY24_01540;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005919432.1;locus_tag=NDY24_01540;product=methyltransferase domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 331222 332562 . - . ID=gene-NDY24_01545;Name=NDY24_01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01545 CP098602.1 Protein Homology CDS 331222 332562 . - 0 ID=cds-UUE98614.1;Parent=gene-NDY24_01545;Dbxref=NCBI_GP:UUE98614.1;Name=UUE98614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037726.1;locus_tag=NDY24_01545;product=dicarboxylate/amino acid:cation symporter;protein_id=UUE98614.1;transl_table=11 CP098602.1 Genbank gene 332705 334411 . + . ID=gene-NDY24_01550;Name=NDY24_01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01550 CP098602.1 Protein Homology CDS 332705 334411 . + 0 ID=cds-UUE98615.1;Parent=gene-NDY24_01550;Dbxref=NCBI_GP:UUE98615.1;Name=UUE98615.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508281.1;locus_tag=NDY24_01550;product=alkaline phosphatase;protein_id=UUE98615.1;transl_table=11 CP098602.1 Genbank gene 334503 335798 . + . ID=gene-NDY24_01555;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=NDY24_01555 CP098602.1 Protein Homology CDS 334503 335798 . + 0 ID=cds-UUE98616.1;Parent=gene-NDY24_01555;Dbxref=NCBI_GP:UUE98616.1;Name=UUE98616.1;Ontology_term=GO:0006400,GO:0016879;gbkey=CDS;gene=tilS;go_function=ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449961.1;locus_tag=NDY24_01555;product=tRNA lysidine(34) synthetase TilS;protein_id=UUE98616.1;transl_table=11 CP098602.1 Genbank gene 335830 336093 . + . ID=gene-NDY24_01560;Name=NDY24_01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01560 CP098602.1 Protein Homology CDS 335830 336093 . + 0 ID=cds-UUE98617.1;Parent=gene-NDY24_01560;Dbxref=NCBI_GP:UUE98617.1;Name=UUE98617.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037729.1;locus_tag=NDY24_01560;product=exodeoxyribonuclease VII small subunit;protein_id=UUE98617.1;transl_table=11 CP098602.1 Genbank gene 336095 336970 . + . ID=gene-NDY24_01565;Name=NDY24_01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01565 CP098602.1 Protein Homology CDS 336095 336970 . + 0 ID=cds-UUE98618.1;Parent=gene-NDY24_01565;Dbxref=NCBI_GP:UUE98618.1;Name=UUE98618.1;Ontology_term=GO:0008299;gbkey=CDS;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174296.1;locus_tag=NDY24_01565;product=polyprenyl synthetase family protein;protein_id=UUE98618.1;transl_table=11 CP098602.1 Genbank pseudogene 337403 338501 . + . ID=gene-NDY24_01570;Name=NDY24_01570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_01570;pseudo=true CP098602.1 Protein Homology CDS 337403 338501 . + 0 ID=cds-NDY24_01570;Parent=gene-NDY24_01570;Note=frameshifted%3B internal stop;Ontology_term=GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508287.1;locus_tag=NDY24_01570;product=M35 family metallo-endopeptidase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 338573 338962 . - . ID=gene-NDY24_01575;Name=NDY24_01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01575 CP098602.1 Protein Homology CDS 338573 338962 . - 0 ID=cds-UUE98619.1;Parent=gene-NDY24_01575;Dbxref=NCBI_GP:UUE98619.1;Name=UUE98619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964777.1;locus_tag=NDY24_01575;product=DUF4870 domain-containing protein;protein_id=UUE98619.1;transl_table=11 CP098602.1 Genbank gene 339106 340473 . - . ID=gene-NDY24_01580;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=NDY24_01580 CP098602.1 Protein Homology CDS 339106 340473 . - 0 ID=cds-UUE98620.1;Parent=gene-NDY24_01580;Dbxref=NCBI_GP:UUE98620.1;Name=UUE98620.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449956.1;locus_tag=NDY24_01580;product=metalloprotease PmbA;protein_id=UUE98620.1;transl_table=11 CP098602.1 Genbank gene 340619 341224 . + . ID=gene-NDY24_01585;Name=NDY24_01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01585 CP098602.1 Protein Homology CDS 340619 341224 . + 0 ID=cds-UUE98621.1;Parent=gene-NDY24_01585;Dbxref=NCBI_GP:UUE98621.1;Name=UUE98621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037735.1;locus_tag=NDY24_01585;product=ribosome-associated protein;protein_id=UUE98621.1;transl_table=11 CP098602.1 Genbank gene 341307 342752 . - . ID=gene-NDY24_01590;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=NDY24_01590 CP098602.1 Protein Homology CDS 341307 342752 . - 0 ID=cds-UUE98622.1;Parent=gene-NDY24_01590;Dbxref=NCBI_GP:UUE98622.1;Name=UUE98622.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972594.1;locus_tag=NDY24_01590;product=metalloprotease TldD;protein_id=UUE98622.1;transl_table=11 CP098602.1 Genbank gene 342852 343619 . + . ID=gene-NDY24_01595;Name=NDY24_01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01595 CP098602.1 Protein Homology CDS 342852 343619 . + 0 ID=cds-UUE98623.1;Parent=gene-NDY24_01595;Dbxref=NCBI_GP:UUE98623.1;Name=UUE98623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449953.1;locus_tag=NDY24_01595;product=DUF6065 family protein;protein_id=UUE98623.1;transl_table=11 CP098602.1 Genbank gene 343832 347755 . - . ID=gene-NDY24_01600;Name=NDY24_01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01600 CP098602.1 Protein Homology CDS 343832 347755 . - 0 ID=cds-UUE98624.1;Parent=gene-NDY24_01600;Dbxref=NCBI_GP:UUE98624.1;Name=UUE98624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449952.1;locus_tag=NDY24_01600;product=TIGR02099 family protein;protein_id=UUE98624.1;transl_table=11 CP098602.1 Genbank gene 347925 349424 . - . ID=gene-NDY24_01605;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=NDY24_01605 CP098602.1 Protein Homology CDS 347925 349424 . - 0 ID=cds-UUE98625.1;Parent=gene-NDY24_01605;Dbxref=NCBI_GP:UUE98625.1;Name=UUE98625.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,ribonuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802933.1;locus_tag=NDY24_01605;product=ribonuclease G;protein_id=UUE98625.1;transl_table=11 CP098602.1 Genbank gene 349424 349996 . - . ID=gene-NDY24_01610;Name=NDY24_01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01610 CP098602.1 Protein Homology CDS 349424 349996 . - 0 ID=cds-UUE98626.1;Parent=gene-NDY24_01610;Dbxref=NCBI_GP:UUE98626.1;Name=UUE98626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117854.1;locus_tag=NDY24_01610;product=Maf-like protein;protein_id=UUE98626.1;transl_table=11 CP098602.1 Genbank gene 350119 350853 . + . ID=gene-NDY24_01615;Name=NDY24_01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01615 CP098602.1 Protein Homology CDS 350119 350853 . + 0 ID=cds-UUE98627.1;Parent=gene-NDY24_01615;Dbxref=NCBI_GP:UUE98627.1;Name=UUE98627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302808.1;locus_tag=NDY24_01615;product=SIMPL domain-containing protein;protein_id=UUE98627.1;transl_table=11 CP098602.1 Genbank gene 351159 351842 . + . ID=gene-NDY24_01620;Name=NDY24_01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01620 CP098602.1 Protein Homology CDS 351159 351842 . + 0 ID=cds-UUE98628.1;Parent=gene-NDY24_01620;Dbxref=NCBI_GP:UUE98628.1;Name=UUE98628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486827.1;locus_tag=NDY24_01620;product=energy transducer TonB;protein_id=UUE98628.1;transl_table=11 CP098602.1 Genbank gene 352094 352564 . - . ID=gene-NDY24_01625;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=NDY24_01625 CP098602.1 Protein Homology CDS 352094 352564 . - 0 ID=cds-UUE98629.1;Parent=gene-NDY24_01625;Dbxref=NCBI_GP:UUE98629.1;Name=UUE98629.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301047.1;locus_tag=NDY24_01625;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=UUE98629.1;transl_table=11 CP098602.1 Genbank gene 352686 354227 . + . ID=gene-NDY24_01630;Name=NDY24_01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01630 CP098602.1 Protein Homology CDS 352686 354227 . + 0 ID=cds-UUE98630.1;Parent=gene-NDY24_01630;Dbxref=NCBI_GP:UUE98630.1;Name=UUE98630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005933077.1;locus_tag=NDY24_01630;product=DUF839 domain-containing protein;protein_id=UUE98630.1;transl_table=11 CP098602.1 Genbank gene 354497 355612 . - . ID=gene-NDY24_01635;Name=NDY24_01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01635 CP098602.1 Protein Homology CDS 354497 355612 . - 0 ID=cds-UUE98631.1;Parent=gene-NDY24_01635;Dbxref=NCBI_GP:UUE98631.1;Name=UUE98631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449945.1;locus_tag=NDY24_01635;product=J domain-containing protein;protein_id=UUE98631.1;transl_table=11 CP098602.1 Genbank gene 355625 356035 . - . ID=gene-NDY24_01640;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=NDY24_01640 CP098602.1 Protein Homology CDS 355625 356035 . - 0 ID=cds-UUE98632.1;Parent=gene-NDY24_01640;Dbxref=NCBI_GP:UUE98632.1;Name=UUE98632.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903759.1;locus_tag=NDY24_01640;product=ribosome silencing factor;protein_id=UUE98632.1;transl_table=11 CP098602.1 Genbank gene 356093 356824 . - . ID=gene-NDY24_01645;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=NDY24_01645 CP098602.1 Protein Homology CDS 356093 356824 . - 0 ID=cds-UUF00245.1;Parent=gene-NDY24_01645;Dbxref=NCBI_GP:UUF00245.1;Name=UUF00245.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113885.1;locus_tag=NDY24_01645;product=nicotinate-nucleotide adenylyltransferase;protein_id=UUF00245.1;transl_table=11 CP098602.1 Genbank gene 356932 357960 . - . ID=gene-NDY24_01650;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=NDY24_01650 CP098602.1 Protein Homology CDS 356932 357960 . - 0 ID=cds-UUE98633.1;Parent=gene-NDY24_01650;Dbxref=NCBI_GP:UUE98633.1;Name=UUE98633.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holA;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116404.1;locus_tag=NDY24_01650;product=DNA polymerase III subunit delta;protein_id=UUE98633.1;transl_table=11 CP098602.1 Genbank gene 357982 358617 . - . ID=gene-NDY24_01655;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=NDY24_01655 CP098602.1 Protein Homology CDS 357982 358617 . - 0 ID=cds-UUE98634.1;Parent=gene-NDY24_01655;Dbxref=NCBI_GP:UUE98634.1;Name=UUE98634.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037748.1;locus_tag=NDY24_01655;product=LPS assembly lipoprotein LptE;protein_id=UUE98634.1;transl_table=11 CP098602.1 Genbank gene 358903 361545 . - . ID=gene-NDY24_01660;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=NDY24_01660 CP098602.1 Protein Homology CDS 358903 361545 . - 0 ID=cds-UUE98635.1;Parent=gene-NDY24_01660;Dbxref=NCBI_GP:UUE98635.1;Name=UUE98635.1;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972619.1;locus_tag=NDY24_01660;product=leucine--tRNA ligase;protein_id=UUE98635.1;transl_table=11 CP098602.1 Genbank gene 361618 362229 . - . ID=gene-NDY24_01665;Name=NDY24_01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01665 CP098602.1 Protein Homology CDS 361618 362229 . - 0 ID=cds-UUE98636.1;Parent=gene-NDY24_01665;Dbxref=NCBI_GP:UUE98636.1;Name=UUE98636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449939.1;locus_tag=NDY24_01665;product=DUF998 domain-containing protein;protein_id=UUE98636.1;transl_table=11 CP098602.1 Genbank gene 362506 363363 . + . ID=gene-NDY24_01670;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=NDY24_01670 CP098602.1 Protein Homology CDS 362506 363363 . + 0 ID=cds-UUE98637.1;Parent=gene-NDY24_01670;Dbxref=NCBI_GP:UUE98637.1;Name=UUE98637.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005919399.1;locus_tag=NDY24_01670;product=thioredoxin;protein_id=UUE98637.1;transl_table=11 CP098602.1 Genbank gene 363694 364143 . + . ID=gene-NDY24_01675;Name=NDY24_01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01675 CP098602.1 Protein Homology CDS 363694 364143 . + 0 ID=cds-UUE98638.1;Parent=gene-NDY24_01675;Dbxref=NCBI_GP:UUE98638.1;Name=UUE98638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304338.1;locus_tag=NDY24_01675;product=DUF4442 domain-containing protein;protein_id=UUE98638.1;transl_table=11 CP098602.1 Genbank gene 364315 364554 . + . ID=gene-NDY24_01680;Name=NDY24_01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01680 CP098602.1 Protein Homology CDS 364315 364554 . + 0 ID=cds-UUE98639.1;Parent=gene-NDY24_01680;Dbxref=NCBI_GP:UUE98639.1;Name=UUE98639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051827.1;locus_tag=NDY24_01680;product=DUF378 domain-containing protein;protein_id=UUE98639.1;transl_table=11 CP098602.1 Genbank gene 364746 365651 . + . ID=gene-NDY24_01685;Name=NDY24_01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01685 CP098602.1 Protein Homology CDS 364746 365651 . + 0 ID=cds-UUE98640.1;Parent=gene-NDY24_01685;Dbxref=NCBI_GP:UUE98640.1;Name=UUE98640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377519.1;locus_tag=NDY24_01685;product=peptidylprolyl isomerase;protein_id=UUE98640.1;transl_table=11 CP098602.1 Genbank gene 365715 366602 . - . ID=gene-NDY24_01690;Name=NDY24_01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01690 CP098602.1 Protein Homology CDS 365715 366602 . - 0 ID=cds-UUE98641.1;Parent=gene-NDY24_01690;Dbxref=NCBI_GP:UUE98641.1;Name=UUE98641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007969434.1;locus_tag=NDY24_01690;product=DMT family transporter;protein_id=UUE98641.1;transl_table=11 CP098602.1 Genbank gene 366773 367765 . + . ID=gene-NDY24_01695;Name=NDY24_01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01695 CP098602.1 Protein Homology CDS 366773 367765 . + 0 ID=cds-UUE98642.1;Parent=gene-NDY24_01695;Dbxref=NCBI_GP:UUE98642.1;Name=UUE98642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157136.1;locus_tag=NDY24_01695;product=LysR substrate-binding domain-containing protein;protein_id=UUE98642.1;transl_table=11 CP098602.1 Genbank gene 368141 368434 . + . ID=gene-NDY24_01700;Name=NDY24_01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01700 CP098602.1 Protein Homology CDS 368141 368434 . + 0 ID=cds-UUE98643.1;Parent=gene-NDY24_01700;Dbxref=NCBI_GP:UUE98643.1;Name=UUE98643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157132.1;locus_tag=NDY24_01700;product=hypothetical protein;protein_id=UUE98643.1;transl_table=11 CP098602.1 Genbank pseudogene 368658 369465 . - . ID=gene-NDY24_01705;Name=NDY24_01705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_01705;pseudo=true CP098602.1 Protein Homology CDS 368658 369465 . - 0 ID=cds-NDY24_01705;Parent=gene-NDY24_01705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912913.1;locus_tag=NDY24_01705;product=DUF4349 domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 369462 369818 . - . ID=gene-NDY24_01710;Name=NDY24_01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01710 CP098602.1 Protein Homology CDS 369462 369818 . - 0 ID=cds-UUE98644.1;Parent=gene-NDY24_01710;Dbxref=NCBI_GP:UUE98644.1;Name=UUE98644.1;Ontology_term=GO:0016846;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377506.1;locus_tag=NDY24_01710;product=GFA family protein;protein_id=UUE98644.1;transl_table=11 CP098602.1 Genbank gene 369917 371722 . + . ID=gene-NDY24_01715;Name=NDY24_01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01715 CP098602.1 Protein Homology CDS 369917 371722 . + 0 ID=cds-UUE98645.1;Parent=gene-NDY24_01715;Dbxref=NCBI_GP:UUE98645.1;Name=UUE98645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366861.1;locus_tag=NDY24_01715;product=DUF885 domain-containing protein;protein_id=UUE98645.1;transl_table=11 CP098602.1 Genbank gene 372114 373946 . - . ID=gene-NDY24_01720;Name=NDY24_01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01720 CP098602.1 Protein Homology CDS 372114 373946 . - 0 ID=cds-UUE98646.1;Parent=gene-NDY24_01720;Dbxref=NCBI_GP:UUE98646.1;Name=UUE98646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802848.1;locus_tag=NDY24_01720;product=ABC transporter ATP-binding protein/permease;protein_id=UUE98646.1;transl_table=11 CP098602.1 Genbank gene 374031 374630 . - . ID=gene-NDY24_01725;Name=NDY24_01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01725 CP098602.1 Protein Homology CDS 374031 374630 . - 0 ID=cds-UUE98647.1;Parent=gene-NDY24_01725;Dbxref=NCBI_GP:UUE98647.1;Name=UUE98647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487596.1;locus_tag=NDY24_01725;product=plasmid pRiA4b ORF-3 family protein;protein_id=UUE98647.1;transl_table=11 CP098602.1 Genbank gene 374875 376140 . - . ID=gene-NDY24_01730;Name=NDY24_01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01730 CP098602.1 Protein Homology CDS 374875 376140 . - 0 ID=cds-UUE98648.1;Parent=gene-NDY24_01730;Dbxref=NCBI_GP:UUE98648.1;Name=UUE98648.1;Ontology_term=GO:0006812,GO:0055085,GO:0015299,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=solute:proton antiporter activity|0015299||IEA;go_process=cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487582.1;locus_tag=NDY24_01730;product=cation:proton antiporter;protein_id=UUE98648.1;transl_table=11 CP098602.1 Genbank gene 376474 378069 . - . ID=gene-NDY24_01735;Name=NDY24_01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01735 CP098602.1 Protein Homology CDS 376474 378069 . - 0 ID=cds-UUE98649.1;Parent=gene-NDY24_01735;Dbxref=NCBI_GP:UUE98649.1;Name=UUE98649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158555.1;locus_tag=NDY24_01735;product=serine hydrolase;protein_id=UUE98649.1;transl_table=11 CP098602.1 Genbank gene 378092 378592 . - . ID=gene-NDY24_01740;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=NDY24_01740 CP098602.1 Protein Homology CDS 378092 378592 . - 0 ID=cds-UUE98650.1;Parent=gene-NDY24_01740;Dbxref=NCBI_GP:UUE98650.1;Name=UUE98650.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172501.1;locus_tag=NDY24_01740;product=ribonuclease E activity regulator RraA;protein_id=UUE98650.1;transl_table=11 CP098602.1 Genbank gene 378917 379750 . + . ID=gene-NDY24_01745;Name=NDY24_01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01745 CP098602.1 Protein Homology CDS 378917 379750 . + 0 ID=cds-UUE98651.1;Parent=gene-NDY24_01745;Dbxref=NCBI_GP:UUE98651.1;Name=UUE98651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155814.1;locus_tag=NDY24_01745;product=DUF72 domain-containing protein;protein_id=UUE98651.1;transl_table=11 CP098602.1 Genbank gene 379860 380807 . + . ID=gene-NDY24_01750;Name=NDY24_01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01750 CP098602.1 Protein Homology CDS 379860 380807 . + 0 ID=cds-UUE98652.1;Parent=gene-NDY24_01750;Dbxref=NCBI_GP:UUE98652.1;Name=UUE98652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304048.1;locus_tag=NDY24_01750;product=DMT family transporter;protein_id=UUE98652.1;transl_table=11 CP098602.1 Genbank gene 380918 381988 . - . ID=gene-NDY24_01755;Name=NDY24_01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01755 CP098602.1 Protein Homology CDS 380918 381988 . - 0 ID=cds-UUE98653.1;Parent=gene-NDY24_01755;Dbxref=NCBI_GP:UUE98653.1;Name=UUE98653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005415818.1;locus_tag=NDY24_01755;product=sensor domain-containing diguanylate cyclase;protein_id=UUE98653.1;transl_table=11 CP098602.1 Genbank gene 382114 382836 . - . ID=gene-NDY24_01760;Name=NDY24_01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01760 CP098602.1 Protein Homology CDS 382114 382836 . - 0 ID=cds-UUE98654.1;Parent=gene-NDY24_01760;Dbxref=NCBI_GP:UUE98654.1;Name=UUE98654.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301304.1;locus_tag=NDY24_01760;product=pseudouridine synthase;protein_id=UUE98654.1;transl_table=11 CP098602.1 Genbank gene 382833 385289 . - . ID=gene-NDY24_01765;Name=NDY24_01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01765 CP098602.1 Protein Homology CDS 382833 385289 . - 0 ID=cds-UUF00246.1;Parent=gene-NDY24_01765;Dbxref=NCBI_GP:UUF00246.1;Name=UUF00246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366900.1;locus_tag=NDY24_01765;product=EAL domain-containing protein;protein_id=UUF00246.1;transl_table=11 CP098602.1 Genbank gene 385564 387513 . - . ID=gene-NDY24_01770;Name=NDY24_01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01770 CP098602.1 Protein Homology CDS 385564 387513 . - 0 ID=cds-UUE98655.1;Parent=gene-NDY24_01770;Dbxref=NCBI_GP:UUE98655.1;Name=UUE98655.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159026.1;locus_tag=NDY24_01770;product=DEAD/DEAH box helicase;protein_id=UUE98655.1;transl_table=11 CP098602.1 Genbank gene 387685 388185 . + . ID=gene-NDY24_01775;Name=NDY24_01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01775 CP098602.1 Protein Homology CDS 387685 388185 . + 0 ID=cds-UUE98656.1;Parent=gene-NDY24_01775;Dbxref=NCBI_GP:UUE98656.1;Name=UUE98656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163290.1;locus_tag=NDY24_01775;product=sigma-70 family RNA polymerase sigma factor;protein_id=UUE98656.1;transl_table=11 CP098602.1 Genbank gene 388214 388861 . + . ID=gene-NDY24_01780;Name=NDY24_01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01780 CP098602.1 Protein Homology CDS 388214 388861 . + 0 ID=cds-UUE98657.1;Parent=gene-NDY24_01780;Dbxref=NCBI_GP:UUE98657.1;Name=UUE98657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169196.1;locus_tag=NDY24_01780;product=hypothetical protein;protein_id=UUE98657.1;transl_table=11 CP098602.1 Genbank gene 389017 389259 . + . ID=gene-NDY24_01785;Name=NDY24_01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01785 CP098602.1 Protein Homology CDS 389017 389259 . + 0 ID=cds-UUE98658.1;Parent=gene-NDY24_01785;Dbxref=NCBI_GP:UUE98658.1;Name=UUE98658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037775.1;locus_tag=NDY24_01785;product=RNA-binding S4 domain-containing protein;protein_id=UUE98658.1;transl_table=11 CP098602.1 Genbank gene 389256 389576 . + . ID=gene-NDY24_01790;Name=NDY24_01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01790 CP098602.1 Protein Homology CDS 389256 389576 . + 0 ID=cds-UUE98659.1;Parent=gene-NDY24_01790;Dbxref=NCBI_GP:UUE98659.1;Name=UUE98659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169195.1;locus_tag=NDY24_01790;product=hypothetical protein;protein_id=UUE98659.1;transl_table=11 CP098602.1 Genbank pseudogene 389858 391036 . - . ID=gene-NDY24_01795;Name=ubiM;gbkey=Gene;gene=ubiM;gene_biotype=pseudogene;locus_tag=NDY24_01795;pseudo=true CP098602.1 Protein Homology CDS 389858 391036 . - 0 ID=cds-NDY24_01795;Parent=gene-NDY24_01795;Note=frameshifted;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiM;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437873.1;locus_tag=NDY24_01795;product=5-demethoxyubiquinol-8 5-hydroxylase UbiM;pseudo=true;transl_table=11 CP098602.1 Genbank gene 391212 391613 . - . ID=gene-NDY24_01800;Name=NDY24_01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01800 CP098602.1 Protein Homology CDS 391212 391613 . - 0 ID=cds-UUE98660.1;Parent=gene-NDY24_01800;Dbxref=NCBI_GP:UUE98660.1;Name=UUE98660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005998294.1;locus_tag=NDY24_01800;product=MAPEG family protein;protein_id=UUE98660.1;transl_table=11 CP098602.1 Genbank pseudogene 391642 392181 . - . ID=gene-NDY24_01805;Name=NDY24_01805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_01805;pseudo=true CP098602.1 Protein Homology CDS 391642 392181 . - 0 ID=cds-NDY24_01805;Parent=gene-NDY24_01805;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155824.1;locus_tag=NDY24_01805;product=DUF4019 domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 392350 392598 . - . ID=gene-NDY24_01810;Name=NDY24_01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01810 CP098602.1 Protein Homology CDS 392350 392598 . - 0 ID=cds-UUE98661.1;Parent=gene-NDY24_01810;Dbxref=NCBI_GP:UUE98661.1;Name=UUE98661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487551.1;locus_tag=NDY24_01810;product=hypothetical protein;protein_id=UUE98661.1;transl_table=11 CP098602.1 Genbank gene 392665 393852 . - . ID=gene-NDY24_01815;Name=NDY24_01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01815 CP098602.1 Protein Homology CDS 392665 393852 . - 0 ID=cds-UUF00247.1;Parent=gene-NDY24_01815;Dbxref=NCBI_GP:UUF00247.1;Name=UUF00247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366917.1;locus_tag=NDY24_01815;product=hypothetical protein;protein_id=UUF00247.1;transl_table=11 CP098602.1 Genbank gene 394000 395463 . + . ID=gene-NDY24_01820;Name=NDY24_01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01820 CP098602.1 Protein Homology CDS 394000 395463 . + 0 ID=cds-UUE98662.1;Parent=gene-NDY24_01820;Dbxref=NCBI_GP:UUE98662.1;Name=UUE98662.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159023.1;locus_tag=NDY24_01820;product=helix-turn-helix domain-containing protein;protein_id=UUE98662.1;transl_table=11 CP098602.1 Genbank gene 395460 396005 . + . ID=gene-NDY24_01825;Name=NDY24_01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01825 CP098602.1 Protein Homology CDS 395460 396005 . + 0 ID=cds-UUE98663.1;Parent=gene-NDY24_01825;Dbxref=NCBI_GP:UUE98663.1;Name=UUE98663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452842.1;locus_tag=NDY24_01825;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=UUE98663.1;transl_table=11 CP098602.1 Genbank gene 396042 397343 . + . ID=gene-NDY24_01830;Name=NDY24_01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01830 CP098602.1 Protein Homology CDS 396042 397343 . + 0 ID=cds-UUE98664.1;Parent=gene-NDY24_01830;Dbxref=NCBI_GP:UUE98664.1;Name=UUE98664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155829.1;locus_tag=NDY24_01830;product=ectonucleotide pyrophosphatase/phosphodiesterase;protein_id=UUE98664.1;transl_table=11 CP098602.1 Genbank gene 397387 398730 . + . ID=gene-NDY24_01835;Name=NDY24_01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01835 CP098602.1 Protein Homology CDS 397387 398730 . + 0 ID=cds-UUE98665.1;Parent=gene-NDY24_01835;Dbxref=NCBI_GP:UUE98665.1;Name=UUE98665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463422.1;locus_tag=NDY24_01835;product=chloride channel protein;protein_id=UUE98665.1;transl_table=11 CP098602.1 Genbank gene 398832 399014 . - . ID=gene-NDY24_01840;Name=NDY24_01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01840 CP098602.1 Protein Homology CDS 398832 399014 . - 0 ID=cds-UUE98666.1;Parent=gene-NDY24_01840;Dbxref=NCBI_GP:UUE98666.1;Name=UUE98666.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450150.1;locus_tag=NDY24_01840;product=30S ribosomal protein THX;protein_id=UUE98666.1;transl_table=11 CP098602.1 Genbank gene 399151 399567 . - . ID=gene-NDY24_01845;Name=NDY24_01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01845 CP098602.1 Protein Homology CDS 399151 399567 . - 0 ID=cds-UUE98667.1;Parent=gene-NDY24_01845;Dbxref=NCBI_GP:UUE98667.1;Name=UUE98667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366931.1;locus_tag=NDY24_01845;product=MerC domain-containing protein;protein_id=UUE98667.1;transl_table=11 CP098602.1 Genbank gene 399746 401812 . + . ID=gene-NDY24_01850;Name=NDY24_01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01850 CP098602.1 Protein Homology CDS 399746 401812 . + 0 ID=cds-UUE98668.1;Parent=gene-NDY24_01850;Dbxref=NCBI_GP:UUE98668.1;Name=UUE98668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450152.1;locus_tag=NDY24_01850;product=TonB-dependent receptor;protein_id=UUE98668.1;transl_table=11 CP098602.1 Genbank pseudogene 402158 402581 . + . ID=gene-NDY24_01855;Name=NDY24_01855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_01855;pseudo=true CP098602.1 Protein Homology CDS 402158 402581 . + 0 ID=cds-NDY24_01855;Parent=gene-NDY24_01855;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037789.1;locus_tag=NDY24_01855;product=MarR family winged helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 CP098602.1 Genbank gene 402656 403828 . + . ID=gene-NDY24_01860;Name=NDY24_01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01860 CP098602.1 Protein Homology CDS 402656 403828 . + 0 ID=cds-UUF00248.1;Parent=gene-NDY24_01860;Dbxref=NCBI_GP:UUF00248.1;Name=UUF00248.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=NDY24_01860;product=MFS transporter;protein_id=UUF00248.1;transl_table=11 CP098602.1 Genbank gene 404001 406376 . + . ID=gene-NDY24_01865;Name=NDY24_01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01865 CP098602.1 Protein Homology CDS 404001 406376 . + 0 ID=cds-UUE98669.1;Parent=gene-NDY24_01865;Dbxref=NCBI_GP:UUE98669.1;Name=UUE98669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348048.1;locus_tag=NDY24_01865;product=TonB-dependent receptor;protein_id=UUE98669.1;transl_table=11 CP098602.1 Genbank gene 407297 409045 . + . ID=gene-NDY24_01870;Name=NDY24_01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01870 CP098602.1 Protein Homology CDS 407297 409045 . + 0 ID=cds-UUF00249.1;Parent=gene-NDY24_01870;Dbxref=NCBI_GP:UUF00249.1;Name=UUF00249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159020.1;locus_tag=NDY24_01870;product=S8 family serine peptidase;protein_id=UUF00249.1;transl_table=11 CP098602.1 Genbank gene 409047 409661 . + . ID=gene-NDY24_01875;Name=NDY24_01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01875 CP098602.1 Protein Homology CDS 409047 409661 . + 0 ID=cds-UUE98670.1;Parent=gene-NDY24_01875;Dbxref=NCBI_GP:UUE98670.1;Name=UUE98670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051860.1;locus_tag=NDY24_01875;product=hypothetical protein;protein_id=UUE98670.1;transl_table=11 CP098602.1 Genbank pseudogene 409760 411580 . + . ID=gene-NDY24_01880;Name=NDY24_01880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_01880;pseudo=true CP098602.1 Protein Homology CDS 409760 411580 . + 0 ID=cds-NDY24_01880;Parent=gene-NDY24_01880;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003472946.1;locus_tag=NDY24_01880;product=S8 family serine peptidase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 411582 412175 . + . ID=gene-NDY24_01885;Name=NDY24_01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01885 CP098602.1 Protein Homology CDS 411582 412175 . + 0 ID=cds-UUE98671.1;Parent=gene-NDY24_01885;Dbxref=NCBI_GP:UUE98671.1;Name=UUE98671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571884.1;locus_tag=NDY24_01885;product=hypothetical protein;protein_id=UUE98671.1;transl_table=11 CP098602.1 Genbank gene 412273 413304 . - . ID=gene-NDY24_01890;Name=NDY24_01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01890 CP098602.1 Protein Homology CDS 412273 413304 . - 0 ID=cds-UUE98672.1;Parent=gene-NDY24_01890;Dbxref=NCBI_GP:UUE98672.1;Name=UUE98672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159019.1;locus_tag=NDY24_01890;product=aldo/keto reductase;protein_id=UUE98672.1;transl_table=11 CP098602.1 Genbank gene 413362 414573 . - . ID=gene-NDY24_01895;Name=NDY24_01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01895 CP098602.1 Protein Homology CDS 413362 414573 . - 0 ID=cds-UUE98673.1;Parent=gene-NDY24_01895;Dbxref=NCBI_GP:UUE98673.1;Name=UUE98673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017119002.1;locus_tag=NDY24_01895;product=MFS transporter;protein_id=UUE98673.1;transl_table=11 CP098602.1 Genbank gene 414674 415588 . + . ID=gene-NDY24_01900;Name=NDY24_01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01900 CP098602.1 Protein Homology CDS 414674 415588 . + 0 ID=cds-UUE98674.1;Parent=gene-NDY24_01900;Dbxref=NCBI_GP:UUE98674.1;Name=UUE98674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157161.1;locus_tag=NDY24_01900;product=LysR family transcriptional regulator;protein_id=UUE98674.1;transl_table=11 CP098602.1 Genbank gene 416513 416716 . - . ID=gene-NDY24_01905;Name=NDY24_01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01905 CP098602.1 Protein Homology CDS 416513 416716 . - 0 ID=cds-UUF00250.1;Parent=gene-NDY24_01905;Dbxref=NCBI_GP:UUF00250.1;Name=UUF00250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488570.1;locus_tag=NDY24_01905;product=hypothetical protein;protein_id=UUF00250.1;transl_table=11 CP098602.1 Genbank gene 416979 417272 . - . ID=gene-NDY24_01910;Name=NDY24_01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01910 CP098602.1 GeneMarkS-2+ CDS 416979 417272 . - 0 ID=cds-UUE98675.1;Parent=gene-NDY24_01910;Dbxref=NCBI_GP:UUE98675.1;Name=UUE98675.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_01910;product=hypothetical protein;protein_id=UUE98675.1;transl_table=11 CP098602.1 Genbank gene 417355 417828 . - . ID=gene-NDY24_01915;Name=NDY24_01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01915 CP098602.1 Protein Homology CDS 417355 417828 . - 0 ID=cds-UUE98676.1;Parent=gene-NDY24_01915;Dbxref=NCBI_GP:UUE98676.1;Name=UUE98676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157164.1;locus_tag=NDY24_01915;product=cupin domain-containing protein;protein_id=UUE98676.1;transl_table=11 CP098602.1 Genbank gene 418017 418916 . + . ID=gene-NDY24_01920;Name=NDY24_01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01920 CP098602.1 Protein Homology CDS 418017 418916 . + 0 ID=cds-UUF00251.1;Parent=gene-NDY24_01920;Dbxref=NCBI_GP:UUF00251.1;Name=UUF00251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912844.1;locus_tag=NDY24_01920;product=LysR family transcriptional regulator;protein_id=UUF00251.1;transl_table=11 CP098602.1 Genbank pseudogene 419307 420231 . - . ID=gene-NDY24_01925;Name=NDY24_01925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_01925;pseudo=true CP098602.1 Protein Homology CDS 419307 420231 . - 0 ID=cds-NDY24_01925;Parent=gene-NDY24_01925;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012509957.1;locus_tag=NDY24_01925;product=IS110 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 420687 421670 . - . ID=gene-NDY24_01930;Name=NDY24_01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01930 CP098602.1 Protein Homology CDS 420687 421670 . - 0 ID=cds-UUE98677.1;Parent=gene-NDY24_01930;Dbxref=NCBI_GP:UUE98677.1;Name=UUE98677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437855.1;locus_tag=NDY24_01930;product=aldo/keto reductase;protein_id=UUE98677.1;transl_table=11 CP098602.1 Genbank gene 421914 422606 . - . ID=gene-NDY24_01935;Name=NDY24_01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01935 CP098602.1 Protein Homology CDS 421914 422606 . - 0 ID=cds-UUE98678.1;Parent=gene-NDY24_01935;Dbxref=NCBI_GP:UUE98678.1;Name=UUE98678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450887.1;locus_tag=NDY24_01935;product=TetR/AcrR family transcriptional regulator;protein_id=UUE98678.1;transl_table=11 CP098602.1 Genbank pseudogene 422599 424103 . - . ID=gene-NDY24_01940;Name=NDY24_01940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_01940;pseudo=true CP098602.1 Protein Homology CDS 422599 424103 . - 0 ID=cds-NDY24_01940;Parent=gene-NDY24_01940;Note=frameshifted;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450886.1;locus_tag=NDY24_01940;product=efflux transporter outer membrane subunit;pseudo=true;transl_table=11 CP098602.1 Genbank gene 424105 427248 . - . ID=gene-NDY24_01945;Name=NDY24_01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01945 CP098602.1 Protein Homology CDS 424105 427248 . - 0 ID=cds-UUE98679.1;Parent=gene-NDY24_01945;Dbxref=NCBI_GP:UUE98679.1;Name=UUE98679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348058.1;locus_tag=NDY24_01945;product=efflux RND transporter permease subunit;protein_id=UUE98679.1;transl_table=11 CP098602.1 Genbank gene 427265 428485 . - . ID=gene-NDY24_01950;Name=NDY24_01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01950 CP098602.1 Protein Homology CDS 427265 428485 . - 0 ID=cds-UUE98680.1;Parent=gene-NDY24_01950;Dbxref=NCBI_GP:UUE98680.1;Name=UUE98680.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488557.1;locus_tag=NDY24_01950;product=efflux RND transporter periplasmic adaptor subunit;protein_id=UUE98680.1;transl_table=11 CP098602.1 Genbank gene 428618 429235 . + . ID=gene-NDY24_01955;Name=NDY24_01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01955 CP098602.1 Protein Homology CDS 428618 429235 . + 0 ID=cds-UUE98681.1;Parent=gene-NDY24_01955;Dbxref=NCBI_GP:UUE98681.1;Name=UUE98681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437850.1;locus_tag=NDY24_01955;product=TetR/AcrR family transcriptional regulator;protein_id=UUE98681.1;transl_table=11 CP098602.1 Genbank gene 430001 430495 . - . ID=gene-NDY24_01960;Name=NDY24_01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01960 CP098602.1 Protein Homology CDS 430001 430495 . - 0 ID=cds-UUE98682.1;Parent=gene-NDY24_01960;Dbxref=NCBI_GP:UUE98682.1;Name=UUE98682.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452534.1;locus_tag=NDY24_01960;product=transcriptional repressor;protein_id=UUE98682.1;transl_table=11 CP098602.1 Genbank gene 430511 431914 . - . ID=gene-NDY24_01965;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=NDY24_01965 CP098602.1 Protein Homology CDS 430511 431914 . - 0 ID=cds-UUE98683.1;Parent=gene-NDY24_01965;Dbxref=NCBI_GP:UUE98683.1;Name=UUE98683.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452532.1;locus_tag=NDY24_01965;product=glutamate--tRNA ligase;protein_id=UUE98683.1;transl_table=11 CP098602.1 Genbank gene 431982 433073 . - . ID=gene-NDY24_01970;Name=NDY24_01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01970 CP098602.1 Protein Homology CDS 431982 433073 . - 0 ID=cds-UUE98684.1;Parent=gene-NDY24_01970;Dbxref=NCBI_GP:UUE98684.1;Name=UUE98684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090626.1;locus_tag=NDY24_01970;product=DUF3616 domain-containing protein;protein_id=UUE98684.1;transl_table=11 CP098602.1 Genbank gene 433095 433979 . - . ID=gene-NDY24_01975;Name=NDY24_01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01975 CP098602.1 Protein Homology CDS 433095 433979 . - 0 ID=cds-UUE98685.1;Parent=gene-NDY24_01975;Dbxref=NCBI_GP:UUE98685.1;Name=UUE98685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508370.1;locus_tag=NDY24_01975;product=carbon-nitrogen hydrolase family protein;protein_id=UUE98685.1;transl_table=11 CP098602.1 Genbank gene 434038 434640 . - . ID=gene-NDY24_01980;Name=NDY24_01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01980 CP098602.1 Protein Homology CDS 434038 434640 . - 0 ID=cds-UUE98686.1;Parent=gene-NDY24_01980;Dbxref=NCBI_GP:UUE98686.1;Name=UUE98686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452529.1;locus_tag=NDY24_01980;product=GNAT family N-acetyltransferase;protein_id=UUE98686.1;transl_table=11 CP098602.1 Genbank gene 434684 435106 . - . ID=gene-NDY24_01985;Name=NDY24_01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_01985 CP098602.1 Protein Homology CDS 434684 435106 . - 0 ID=cds-UUE98687.1;Parent=gene-NDY24_01985;Dbxref=NCBI_GP:UUE98687.1;Name=UUE98687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452528.1;locus_tag=NDY24_01985;product=hypothetical protein;protein_id=UUE98687.1;transl_table=11 CP098602.1 Genbank gene 435114 436433 . - . ID=gene-NDY24_01990;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=NDY24_01990 CP098602.1 Protein Homology CDS 435114 436433 . - 0 ID=cds-UUE98688.1;Parent=gene-NDY24_01990;Dbxref=NCBI_GP:UUE98688.1;Name=UUE98688.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005929861.1;locus_tag=NDY24_01990;product=cell envelope integrity protein CreD;protein_id=UUE98688.1;transl_table=11 CP098602.1 Genbank pseudogene 437303 438752 . - . ID=gene-NDY24_01995;Name=creC;gbkey=Gene;gene=creC;gene_biotype=pseudogene;locus_tag=NDY24_01995;pseudo=true CP098602.1 Protein Homology CDS 437303 438752 . - 0 ID=cds-NDY24_01995;Parent=gene-NDY24_01995;Note=frameshifted;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016021;gbkey=CDS;gene=creC;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090630.1;locus_tag=NDY24_01995;product=two-component system sensor histidine kinase CreC;pseudo=true;transl_table=11 CP098602.1 Genbank gene 438798 439502 . - . ID=gene-NDY24_02000;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=NDY24_02000 CP098602.1 Protein Homology CDS 438798 439502 . - 0 ID=cds-UUE98689.1;Parent=gene-NDY24_02000;Dbxref=NCBI_GP:UUE98689.1;Name=UUE98689.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902310.1;locus_tag=NDY24_02000;product=two-component system response regulator CreB;protein_id=UUE98689.1;transl_table=11 CP098602.1 Genbank pseudogene 439598 440359 . + . ID=gene-NDY24_02005;Name=NDY24_02005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_02005;pseudo=true CP098602.1 Protein Homology CDS 439598 440359 . + 0 ID=cds-NDY24_02005;Parent=gene-NDY24_02005;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=NDY24_02005;product=IS5 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 440399 441307 . + . ID=gene-NDY24_02010;Name=rlmJ;gbkey=Gene;gene=rlmJ;gene_biotype=protein_coding;locus_tag=NDY24_02010 CP098602.1 Protein Homology CDS 440399 441307 . + 0 ID=cds-UUE98690.1;Parent=gene-NDY24_02010;Dbxref=NCBI_GP:UUE98690.1;Name=UUE98690.1;Ontology_term=GO:0070475,GO:0008649;gbkey=CDS;gene=rlmJ;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802763.1;locus_tag=NDY24_02010;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=UUE98690.1;transl_table=11 CP098602.1 Genbank gene 441501 442043 . + . ID=gene-NDY24_02015;Name=NDY24_02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02015 CP098602.1 Protein Homology CDS 441501 442043 . + 0 ID=cds-UUE98691.1;Parent=gene-NDY24_02015;Dbxref=NCBI_GP:UUE98691.1;Name=UUE98691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301140.1;locus_tag=NDY24_02015;product=GNAT family N-acetyltransferase;protein_id=UUE98691.1;transl_table=11 CP098602.1 Genbank gene 442564 446034 . + . ID=gene-NDY24_02020;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=NDY24_02020 CP098602.1 Protein Homology CDS 442564 446034 . + 0 ID=cds-UUE98692.1;Parent=gene-NDY24_02020;Dbxref=NCBI_GP:UUE98692.1;Name=UUE98692.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016944090.1;locus_tag=NDY24_02020;product=transcription-repair coupling factor;protein_id=UUE98692.1;transl_table=11 CP098602.1 Genbank gene 446238 449162 . - . ID=gene-NDY24_02025;Name=NDY24_02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02025 CP098602.1 GeneMarkS-2+ CDS 446238 449162 . - 0 ID=cds-UUF00528.1;Parent=gene-NDY24_02025;Dbxref=NCBI_GP:UUF00528.1;Name=UUF00528.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_02025;product=hypothetical protein;protein_id=UUF00528.1;transl_table=11 CP098602.1 Genbank gene 449807 449971 . - . ID=gene-NDY24_02030;Name=NDY24_02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02030 CP098602.1 GeneMarkS-2+ CDS 449807 449971 . - 0 ID=cds-UUF00529.1;Parent=gene-NDY24_02030;Dbxref=NCBI_GP:UUF00529.1;Name=UUF00529.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_02030;product=hypothetical protein;protein_id=UUF00529.1;transl_table=11 CP098602.1 Genbank gene 449962 450939 . - . ID=gene-NDY24_02035;Name=NDY24_02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02035 CP098602.1 GeneMarkS-2+ CDS 449962 450939 . - 0 ID=cds-UUE98693.1;Parent=gene-NDY24_02035;Dbxref=NCBI_GP:UUE98693.1;Name=UUE98693.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_02035;product=hypothetical protein;protein_id=UUE98693.1;transl_table=11 CP098602.1 Genbank gene 451044 451451 . - . ID=gene-NDY24_02040;Name=NDY24_02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02040 CP098602.1 GeneMarkS-2+ CDS 451044 451451 . - 0 ID=cds-UUE98694.1;Parent=gene-NDY24_02040;Dbxref=NCBI_GP:UUE98694.1;Name=UUE98694.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_02040;product=hypothetical protein;protein_id=UUE98694.1;transl_table=11 CP098602.1 Genbank gene 451465 451644 . - . ID=gene-NDY24_02045;Name=NDY24_02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02045 CP098602.1 GeneMarkS-2+ CDS 451465 451644 . - 0 ID=cds-UUE98695.1;Parent=gene-NDY24_02045;Dbxref=NCBI_GP:UUE98695.1;Name=UUE98695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_02045;product=hypothetical protein;protein_id=UUE98695.1;transl_table=11 CP098602.1 Genbank gene 452350 452763 . - . ID=gene-NDY24_02050;Name=NDY24_02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02050 CP098602.1 GeneMarkS-2+ CDS 452350 452763 . - 0 ID=cds-UUE98696.1;Parent=gene-NDY24_02050;Dbxref=NCBI_GP:UUE98696.1;Name=UUE98696.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_02050;product=hypothetical protein;protein_id=UUE98696.1;transl_table=11 CP098602.1 Genbank gene 453059 453214 . - . ID=gene-NDY24_02055;Name=NDY24_02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02055 CP098602.1 GeneMarkS-2+ CDS 453059 453214 . - 0 ID=cds-UUF00530.1;Parent=gene-NDY24_02055;Dbxref=NCBI_GP:UUF00530.1;Name=UUF00530.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_02055;product=hypothetical protein;protein_id=UUF00530.1;transl_table=11 CP098602.1 Genbank pseudogene 453223 453573 . - . ID=gene-NDY24_02060;Name=NDY24_02060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_02060;pseudo=true CP098602.1 Protein Homology CDS 453223 453573 . - 0 ID=cds-NDY24_02060;Parent=gene-NDY24_02060;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913224.1;locus_tag=NDY24_02060;product=type I toxin-antitoxin system SymE family toxin;pseudo=true;transl_table=11 CP098602.1 Genbank gene 454163 454429 . - . ID=gene-NDY24_02065;Name=NDY24_02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02065 CP098602.1 GeneMarkS-2+ CDS 454163 454429 . - 0 ID=cds-UUE98697.1;Parent=gene-NDY24_02065;Dbxref=NCBI_GP:UUE98697.1;Name=UUE98697.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_02065;product=hypothetical protein;protein_id=UUE98697.1;transl_table=11 CP098602.1 Genbank gene 454529 454858 . + . ID=gene-NDY24_02070;Name=NDY24_02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02070 CP098602.1 Protein Homology CDS 454529 454858 . + 0 ID=cds-UUE98698.1;Parent=gene-NDY24_02070;Dbxref=NCBI_GP:UUE98698.1;Name=UUE98698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016905011.1;locus_tag=NDY24_02070;product=STAS domain-containing protein;protein_id=UUE98698.1;transl_table=11 CP098602.1 Genbank gene 454877 456892 . + . ID=gene-NDY24_02075;Name=NDY24_02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02075 CP098602.1 Protein Homology CDS 454877 456892 . + 0 ID=cds-UUE98699.1;Parent=gene-NDY24_02075;Dbxref=NCBI_GP:UUE98699.1;Name=UUE98699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576106.1;locus_tag=NDY24_02075;product=chemotaxis protein CheA;protein_id=UUE98699.1;transl_table=11 CP098602.1 Genbank gene 456961 459117 . + . ID=gene-NDY24_02080;Name=NDY24_02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02080 CP098602.1 Protein Homology CDS 456961 459117 . + 0 ID=cds-UUE98700.1;Parent=gene-NDY24_02080;Dbxref=NCBI_GP:UUE98700.1;Name=UUE98700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971660.1;locus_tag=NDY24_02080;product=methyl-accepting chemotaxis protein;protein_id=UUE98700.1;transl_table=11 CP098602.1 Genbank pseudogene 459128 459647 . + . ID=gene-NDY24_02085;Name=NDY24_02085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_02085;pseudo=true CP098602.1 Protein Homology CDS 459128 459647 . + 0 ID=cds-NDY24_02085;Parent=gene-NDY24_02085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502619.1;locus_tag=NDY24_02085;product=chemotaxis protein CheW;pseudo=true;transl_table=11 CP098602.1 Genbank gene 459676 460959 . + . ID=gene-NDY24_02090;Name=NDY24_02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02090 CP098602.1 Protein Homology CDS 459676 460959 . + 0 ID=cds-UUE98701.1;Parent=gene-NDY24_02090;Dbxref=NCBI_GP:UUE98701.1;Name=UUE98701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010375512.1;locus_tag=NDY24_02090;product=EAL domain-containing protein;protein_id=UUE98701.1;transl_table=11 CP098602.1 Genbank gene 460963 461769 . + . ID=gene-NDY24_02095;Name=NDY24_02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02095 CP098602.1 Protein Homology CDS 460963 461769 . + 0 ID=cds-UUE98702.1;Parent=gene-NDY24_02095;Dbxref=NCBI_GP:UUE98702.1;Name=UUE98702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301146.1;locus_tag=NDY24_02095;product=protein-glutamate O-methyltransferase CheR;protein_id=UUE98702.1;transl_table=11 CP098602.1 Genbank gene 461766 462905 . + . ID=gene-NDY24_02100;Name=NDY24_02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02100 CP098602.1 Protein Homology CDS 461766 462905 . + 0 ID=cds-UUF00252.1;Parent=gene-NDY24_02100;Dbxref=NCBI_GP:UUF00252.1;Name=UUF00252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971662.1;locus_tag=NDY24_02100;product=chemotaxis response regulator protein-glutamate methylesterase;protein_id=UUF00252.1;transl_table=11 CP098602.1 Genbank gene 462930 464492 . - . ID=gene-NDY24_02105;Name=NDY24_02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02105 CP098602.1 Protein Homology CDS 462930 464492 . - 0 ID=cds-UUE98703.1;Parent=gene-NDY24_02105;Dbxref=NCBI_GP:UUE98703.1;Name=UUE98703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051886.1;locus_tag=NDY24_02105;product=phospholipase D family protein;protein_id=UUE98703.1;transl_table=11 CP098602.1 Genbank gene 464647 466749 . - . ID=gene-NDY24_02110;Name=NDY24_02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02110 CP098602.1 Protein Homology CDS 464647 466749 . - 0 ID=cds-UUE98704.1;Parent=gene-NDY24_02110;Dbxref=NCBI_GP:UUE98704.1;Name=UUE98704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488112.1;locus_tag=NDY24_02110;product=peptidase;protein_id=UUE98704.1;transl_table=11 CP098602.1 Genbank gene 466973 467290 . - . ID=gene-NDY24_02115;Name=NDY24_02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02115 CP098602.1 Protein Homology CDS 466973 467290 . - 0 ID=cds-UUE98705.1;Parent=gene-NDY24_02115;Dbxref=NCBI_GP:UUE98705.1;Name=UUE98705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157192.1;locus_tag=NDY24_02115;product=hypothetical protein;protein_id=UUE98705.1;transl_table=11 CP098602.1 Genbank gene 467443 468144 . - . ID=gene-NDY24_02120;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=NDY24_02120 CP098602.1 Protein Homology CDS 467443 468144 . - 0 ID=cds-UUF00253.1;Parent=gene-NDY24_02120;Dbxref=NCBI_GP:UUF00253.1;Name=UUF00253.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008267372.1;locus_tag=NDY24_02120;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=UUF00253.1;transl_table=11 CP098602.1 Genbank pseudogene 468295 468950 . + . ID=gene-NDY24_02125;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=pseudogene;locus_tag=NDY24_02125;pseudo=true CP098602.1 Protein Homology CDS 468295 468950 . + 0 ID=cds-NDY24_02125;Parent=gene-NDY24_02125;Note=cleaves DNA at apurinic or apyrimidinic sites%3B frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508394.1;locus_tag=NDY24_02125;product=deoxyribonuclease V;pseudo=true;transl_table=11 CP098602.1 Genbank gene 469120 470010 . + . ID=gene-NDY24_02130;Name=NDY24_02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02130 CP098602.1 Protein Homology CDS 469120 470010 . + 0 ID=cds-UUE98706.1;Parent=gene-NDY24_02130;Dbxref=NCBI_GP:UUE98706.1;Name=UUE98706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010375490.1;locus_tag=NDY24_02130;product=pirin family protein;protein_id=UUE98706.1;transl_table=11 CP098602.1 Genbank gene 470354 470776 . + . ID=gene-NDY24_02135;Name=NDY24_02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02135 CP098602.1 Protein Homology CDS 470354 470776 . + 0 ID=cds-UUE98707.1;Parent=gene-NDY24_02135;Dbxref=NCBI_GP:UUE98707.1;Name=UUE98707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508396.1;locus_tag=NDY24_02135;product=hypothetical protein;protein_id=UUE98707.1;transl_table=11 CP098602.1 Genbank gene 470837 471232 . - . ID=gene-NDY24_02140;Name=NDY24_02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02140 CP098602.1 Protein Homology CDS 470837 471232 . - 0 ID=cds-UUE98708.1;Parent=gene-NDY24_02140;Dbxref=NCBI_GP:UUE98708.1;Name=UUE98708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453353.1;locus_tag=NDY24_02140;product=OsmC family protein;protein_id=UUE98708.1;transl_table=11 CP098602.1 Genbank pseudogene 471304 472161 . - . ID=gene-NDY24_02145;Name=NDY24_02145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_02145;pseudo=true CP098602.1 Protein Homology CDS 471304 472161 . - 0 ID=cds-NDY24_02145;Parent=gene-NDY24_02145;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157199.1;locus_tag=NDY24_02145;product=pirin family protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 472416 474486 . + . ID=gene-NDY24_02150;Name=NDY24_02150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_02150;pseudo=true CP098602.1 Protein Homology CDS 472416 474486 . + 0 ID=cds-NDY24_02150;Parent=gene-NDY24_02150;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802008.1;locus_tag=NDY24_02150;product=carbon starvation protein A;pseudo=true;transl_table=11 CP098602.1 Genbank gene 474486 474710 . + . ID=gene-NDY24_02155;Name=NDY24_02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02155 CP098602.1 Protein Homology CDS 474486 474710 . + 0 ID=cds-UUE98709.1;Parent=gene-NDY24_02155;Dbxref=NCBI_GP:UUE98709.1;Name=UUE98709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508400.1;locus_tag=NDY24_02155;product=CstA-like transporter-associated (seleno)protein;protein_id=UUE98709.1;transl_table=11 CP098602.1 Genbank gene 475353 476036 . - . ID=gene-NDY24_02160;Name=NDY24_02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02160 CP098602.1 Protein Homology CDS 475353 476036 . - 0 ID=cds-UUE98710.1;Parent=gene-NDY24_02160;Dbxref=NCBI_GP:UUE98710.1;Name=UUE98710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116353.1;locus_tag=NDY24_02160;product=HAD family hydrolase;protein_id=UUE98710.1;transl_table=11 CP098602.1 Genbank pseudogene 476300 477065 . + . ID=gene-NDY24_02165;Name=NDY24_02165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_02165;pseudo=true CP098602.1 Protein Homology CDS 476300 477065 . + 0 ID=cds-NDY24_02165;Parent=gene-NDY24_02165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472422.1;locus_tag=NDY24_02165;product=ankyrin repeat domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 477104 478307 . + . ID=gene-NDY24_02170;Name=NDY24_02170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_02170;pseudo=true CP098602.1 Protein Homology CDS 477104 478307 . + 0 ID=cds-NDY24_02170;Parent=gene-NDY24_02170;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157202.1;locus_tag=NDY24_02170;product=DUF2974 domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 478359 479606 . - . ID=gene-NDY24_02175;Name=NDY24_02175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_02175;pseudo=true CP098602.1 Protein Homology CDS 478359 479606 . - 0 ID=cds-NDY24_02175;Parent=gene-NDY24_02175;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904078.1;locus_tag=NDY24_02175;product=DUF819 family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 479839 480054 . - . ID=gene-NDY24_02180;Name=NDY24_02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02180 CP098602.1 Protein Homology CDS 479839 480054 . - 0 ID=cds-UUE98711.1;Parent=gene-NDY24_02180;Dbxref=NCBI_GP:UUE98711.1;Name=UUE98711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020372752.1;locus_tag=NDY24_02180;product=hypothetical protein;protein_id=UUE98711.1;transl_table=11 CP098602.1 Genbank gene 480577 481185 . - . ID=gene-NDY24_02185;Name=NDY24_02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02185 CP098602.1 Protein Homology CDS 480577 481185 . - 0 ID=cds-UUE98712.1;Parent=gene-NDY24_02185;Dbxref=NCBI_GP:UUE98712.1;Name=UUE98712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572425.1;locus_tag=NDY24_02185;product=nucleotidyltransferase family protein;protein_id=UUE98712.1;transl_table=11 CP098602.1 Genbank gene 481622 482671 . - . ID=gene-NDY24_02190;Name=NDY24_02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02190 CP098602.1 Protein Homology CDS 481622 482671 . - 0 ID=cds-UUE98713.1;Parent=gene-NDY24_02190;Dbxref=NCBI_GP:UUE98713.1;Name=UUE98713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448861.1;locus_tag=NDY24_02190;product=XdhC family protein;protein_id=UUE98713.1;transl_table=11 CP098602.1 Genbank gene 482668 484875 . - . ID=gene-NDY24_02195;Name=NDY24_02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02195 CP098602.1 Protein Homology CDS 482668 484875 . - 0 ID=cds-UUE98714.1;Parent=gene-NDY24_02195;Dbxref=NCBI_GP:UUE98714.1;Name=UUE98714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488152.1;locus_tag=NDY24_02195;product=xanthine dehydrogenase family protein molybdopterin-binding subunit;protein_id=UUE98714.1;transl_table=11 CP098602.1 Genbank gene 484877 485827 . - . ID=gene-NDY24_02200;Name=NDY24_02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02200 CP098602.1 Protein Homology CDS 484877 485827 . - 0 ID=cds-UUE98715.1;Parent=gene-NDY24_02200;Dbxref=NCBI_GP:UUE98715.1;Name=UUE98715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159004.1;locus_tag=NDY24_02200;product=xanthine dehydrogenase family protein subunit M;protein_id=UUE98715.1;transl_table=11 CP098602.1 Genbank gene 485824 486474 . - . ID=gene-NDY24_02205;Name=paoA;gbkey=Gene;gene=paoA;gene_biotype=protein_coding;locus_tag=NDY24_02205 CP098602.1 Protein Homology CDS 485824 486474 . - 0 ID=cds-UUE98716.1;Parent=gene-NDY24_02205;Dbxref=NCBI_GP:UUE98716.1;Name=UUE98716.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;gbkey=CDS;gene=paoA;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005919229.1;locus_tag=NDY24_02205;product=aldehyde dehydrogenase iron-sulfur subunit;protein_id=UUE98716.1;transl_table=11 CP098602.1 Genbank gene 486923 488407 . + . ID=gene-NDY24_02210;Name=NDY24_02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02210 CP098602.1 Protein Homology CDS 486923 488407 . + 0 ID=cds-UUE98717.1;Parent=gene-NDY24_02210;Dbxref=NCBI_GP:UUE98717.1;Name=UUE98717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448865.1;locus_tag=NDY24_02210;product=sensor domain-containing diguanylate cyclase;protein_id=UUE98717.1;transl_table=11 CP098602.1 Genbank gene 488610 491960 . - . ID=gene-NDY24_02215;Name=NDY24_02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02215 CP098602.1 Protein Homology CDS 488610 491960 . - 0 ID=cds-UUE98718.1;Parent=gene-NDY24_02215;Dbxref=NCBI_GP:UUE98718.1;Name=UUE98718.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF014081.2;locus_tag=NDY24_02215;product=amidohydrolase family protein;protein_id=UUE98718.1;transl_table=11 CP098602.1 Genbank gene 492044 494242 . - . ID=gene-NDY24_02220;Name=NDY24_02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02220 CP098602.1 Protein Homology CDS 492044 494242 . - 0 ID=cds-UUE98719.1;Parent=gene-NDY24_02220;Dbxref=NCBI_GP:UUE98719.1;Name=UUE98719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448867.1;locus_tag=NDY24_02220;product=TonB-dependent receptor;protein_id=UUE98719.1;transl_table=11 CP098602.1 Genbank gene 494552 495076 . - . ID=gene-NDY24_02225;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=NDY24_02225 CP098602.1 Protein Homology CDS 494552 495076 . - 0 ID=cds-UUE98720.1;Parent=gene-NDY24_02225;Dbxref=NCBI_GP:UUE98720.1;Name=UUE98720.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,transcription%2C DNA-templated|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157214.1;locus_tag=NDY24_02225;product=single-stranded DNA-binding protein;protein_id=UUE98720.1;transl_table=11 CP098602.1 Genbank gene 495350 496348 . + . ID=gene-NDY24_02230;Name=NDY24_02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02230 CP098602.1 Protein Homology CDS 495350 496348 . + 0 ID=cds-UUF00254.1;Parent=gene-NDY24_02230;Dbxref=NCBI_GP:UUF00254.1;Name=UUF00254.1;Ontology_term=GO:0008299;gbkey=CDS;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966188.1;locus_tag=NDY24_02230;product=polyprenyl synthetase family protein;protein_id=UUF00254.1;transl_table=11 CP098602.1 Genbank gene 496550 497959 . - . ID=gene-NDY24_02235;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=NDY24_02235 CP098602.1 Protein Homology CDS 496550 497959 . - 0 ID=cds-UUE98721.1;Parent=gene-NDY24_02235;Dbxref=NCBI_GP:UUE98721.1;Name=UUE98721.1;Ontology_term=GO:0009252,GO:0008764;gbkey=CDS;gene=murD;go_function=UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508423.1;locus_tag=NDY24_02235;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=UUE98721.1;transl_table=11 CP098602.1 Genbank gene 497940 499295 . - . ID=gene-NDY24_02240;Name=NDY24_02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02240 CP098602.1 Protein Homology CDS 497940 499295 . - 0 ID=cds-UUE98722.1;Parent=gene-NDY24_02240;Dbxref=NCBI_GP:UUE98722.1;Name=UUE98722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369381.1;locus_tag=NDY24_02240;product=endonuclease domain-containing protein;protein_id=UUE98722.1;transl_table=11 CP098602.1 Genbank gene 499292 499750 . - . ID=gene-NDY24_02245;Name=NDY24_02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02245 CP098602.1 Protein Homology CDS 499292 499750 . - 0 ID=cds-UUE98723.1;Parent=gene-NDY24_02245;Dbxref=NCBI_GP:UUE98723.1;Name=UUE98723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502553.1;locus_tag=NDY24_02245;product=hypothetical protein;protein_id=UUE98723.1;transl_table=11 CP098602.1 Genbank gene 499734 502343 . - . ID=gene-NDY24_02250;Name=NDY24_02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02250 CP098602.1 Protein Homology CDS 499734 502343 . - 0 ID=cds-UUE98724.1;Parent=gene-NDY24_02250;Dbxref=NCBI_GP:UUE98724.1;Name=UUE98724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090660.1;locus_tag=NDY24_02250;product=bifunctional aspartate kinase/diaminopimelate decarboxylase;protein_id=UUE98724.1;transl_table=11 CP098602.1 Genbank pseudogene 502526 503405 . + . ID=gene-NDY24_02255;Name=NDY24_02255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_02255;pseudo=true CP098602.1 Protein Homology CDS 502526 503405 . + 0 ID=cds-NDY24_02255;Parent=gene-NDY24_02255;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010375445.1;locus_tag=NDY24_02255;product=PhzF family phenazine biosynthesis protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 503437 504317 . + . ID=gene-NDY24_02260;Name=NDY24_02260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_02260;pseudo=true CP098602.1 Protein Homology CDS 503437 504317 . + 0 ID=cds-NDY24_02260;Parent=gene-NDY24_02260;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369373.1;locus_tag=NDY24_02260;product=PhzF family phenazine biosynthesis protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 504482 505084 . - . ID=gene-NDY24_02265;Name=NDY24_02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02265 CP098602.1 Protein Homology CDS 504482 505084 . - 0 ID=cds-UUE98725.1;Parent=gene-NDY24_02265;Dbxref=NCBI_GP:UUE98725.1;Name=UUE98725.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472432.1;locus_tag=NDY24_02265;product=glycine zipper 2TM domain-containing protein;protein_id=UUE98725.1;transl_table=11 CP098602.1 Genbank gene 505237 505671 . - . ID=gene-NDY24_02270;Name=NDY24_02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02270 CP098602.1 Protein Homology CDS 505237 505671 . - 0 ID=cds-UUE98726.1;Parent=gene-NDY24_02270;Dbxref=NCBI_GP:UUE98726.1;Name=UUE98726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159920.1;locus_tag=NDY24_02270;product=OsmC family protein;protein_id=UUE98726.1;transl_table=11 CP098602.1 Genbank gene 505889 506836 . - . ID=gene-NDY24_02275;Name=NDY24_02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02275 CP098602.1 Protein Homology CDS 505889 506836 . - 0 ID=cds-UUE98727.1;Parent=gene-NDY24_02275;Dbxref=NCBI_GP:UUE98727.1;Name=UUE98727.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913284.1;locus_tag=NDY24_02275;product=aspartate carbamoyltransferase catalytic subunit;protein_id=UUE98727.1;transl_table=11 CP098602.1 Genbank gene 506853 507320 . - . ID=gene-NDY24_02280;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=NDY24_02280 CP098602.1 Protein Homology CDS 506853 507320 . - 0 ID=cds-UUE98728.1;Parent=gene-NDY24_02280;Dbxref=NCBI_GP:UUE98728.1;Name=UUE98728.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302529.1;locus_tag=NDY24_02280;product=Holliday junction resolvase RuvX;protein_id=UUE98728.1;transl_table=11 CP098602.1 Genbank gene 507313 507879 . - . ID=gene-NDY24_02285;Name=NDY24_02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02285 CP098602.1 Protein Homology CDS 507313 507879 . - 0 ID=cds-UUE98729.1;Parent=gene-NDY24_02285;Dbxref=NCBI_GP:UUE98729.1;Name=UUE98729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802054.1;locus_tag=NDY24_02285;product=YqgE/AlgH family protein;protein_id=UUE98729.1;transl_table=11 CP098602.1 Genbank gene 508177 508722 . + . ID=gene-NDY24_02290;Name=NDY24_02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02290 CP098602.1 Protein Homology CDS 508177 508722 . + 0 ID=cds-UUE98730.1;Parent=gene-NDY24_02290;Dbxref=NCBI_GP:UUE98730.1;Name=UUE98730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448882.1;locus_tag=NDY24_02290;product=DNA-3-methyladenine glycosylase I;protein_id=UUE98730.1;transl_table=11 CP098602.1 Genbank pseudogene 508860 509535 . - . ID=gene-NDY24_02295;Name=NDY24_02295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_02295;pseudo=true CP098602.1 Protein Homology CDS 508860 509535 . - 0 ID=cds-NDY24_02295;Parent=gene-NDY24_02295;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851096.1;locus_tag=NDY24_02295;product=YitT family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 509836 510966 . - . ID=gene-NDY24_02300;Name=NDY24_02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02300 CP098602.1 Protein Homology CDS 509836 510966 . - 0 ID=cds-UUE98731.1;Parent=gene-NDY24_02300;Dbxref=NCBI_GP:UUE98731.1;Name=UUE98731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489921.1;locus_tag=NDY24_02300;product=PilT/PilU family type 4a pilus ATPase;protein_id=UUE98731.1;transl_table=11 CP098602.1 Genbank gene 511089 512126 . - . ID=gene-NDY24_02305;Name=NDY24_02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02305 CP098602.1 Protein Homology CDS 511089 512126 . - 0 ID=cds-UUE98732.1;Parent=gene-NDY24_02305;Dbxref=NCBI_GP:UUE98732.1;Name=UUE98732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019185385.1;locus_tag=NDY24_02305;product=type IV pilus twitching motility protein PilT;protein_id=UUE98732.1;transl_table=11 CP098602.1 Genbank pseudogene 512449 513176 . + . ID=gene-NDY24_02310;Name=NDY24_02310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_02310;pseudo=true CP098602.1 Protein Homology CDS 512449 513176 . + 0 ID=cds-NDY24_02310;Parent=gene-NDY24_02310;Note=frameshifted;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157671.1;locus_tag=NDY24_02310;product=YggS family pyridoxal phosphate-dependent enzyme;pseudo=true;transl_table=11 CP098602.1 Genbank gene 513191 514045 . + . ID=gene-NDY24_02315;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=NDY24_02315 CP098602.1 Protein Homology CDS 513191 514045 . + 0 ID=cds-UUE98733.1;Parent=gene-NDY24_02315;Dbxref=NCBI_GP:UUE98733.1;Name=UUE98733.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502533.1;locus_tag=NDY24_02315;product=pyrroline-5-carboxylate reductase;protein_id=UUE98733.1;transl_table=11 CP098602.1 Genbank gene 514483 514908 . + . ID=gene-NDY24_02320;Name=NDY24_02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02320 CP098602.1 Protein Homology CDS 514483 514908 . + 0 ID=cds-UUE98734.1;Parent=gene-NDY24_02320;Dbxref=NCBI_GP:UUE98734.1;Name=UUE98734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502532.1;locus_tag=NDY24_02320;product=HU family DNA-binding protein;protein_id=UUE98734.1;transl_table=11 CP098602.1 Genbank gene 515048 515662 . + . ID=gene-NDY24_02325;Name=NDY24_02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02325 CP098602.1 Protein Homology CDS 515048 515662 . + 0 ID=cds-UUE98735.1;Parent=gene-NDY24_02325;Dbxref=NCBI_GP:UUE98735.1;Name=UUE98735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157674.1;locus_tag=NDY24_02325;product=M23 family metallopeptidase;protein_id=UUE98735.1;transl_table=11 CP098602.1 Genbank gene 515775 516062 . + . ID=gene-NDY24_02330;Name=NDY24_02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02330 CP098602.1 Protein Homology CDS 515775 516062 . + 0 ID=cds-UUF00255.1;Parent=gene-NDY24_02330;Dbxref=NCBI_GP:UUF00255.1;Name=UUF00255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157675.1;locus_tag=NDY24_02330;product=DUF3861 domain-containing protein;protein_id=UUF00255.1;transl_table=11 CP098602.1 Genbank pseudogene 516286 516674 . + . ID=gene-NDY24_02335;Name=NDY24_02335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_02335;pseudo=true CP098602.1 Protein Homology CDS 516286 516674 . + 0 ID=cds-NDY24_02335;Parent=gene-NDY24_02335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448892.1;locus_tag=NDY24_02335;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 516730 517326 . + . ID=gene-NDY24_02340;Name=NDY24_02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02340 CP098602.1 Protein Homology CDS 516730 517326 . + 0 ID=cds-UUE98736.1;Parent=gene-NDY24_02340;Dbxref=NCBI_GP:UUE98736.1;Name=UUE98736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487749.1;locus_tag=NDY24_02340;product=DUF1439 domain-containing protein;protein_id=UUE98736.1;transl_table=11 CP098602.1 Genbank gene 517596 518063 . - . ID=gene-NDY24_02345;Name=NDY24_02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02345 CP098602.1 Protein Homology CDS 517596 518063 . - 0 ID=cds-UUE98737.1;Parent=gene-NDY24_02345;Dbxref=NCBI_GP:UUE98737.1;Name=UUE98737.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237451.1;locus_tag=NDY24_02345;product=SET domain-containing protein-lysine N-methyltransferase;protein_id=UUE98737.1;transl_table=11 CP098602.1 Genbank gene 518240 518698 . + . ID=gene-NDY24_02350;Name=NDY24_02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02350 CP098602.1 Protein Homology CDS 518240 518698 . + 0 ID=cds-UUE98738.1;Parent=gene-NDY24_02350;Dbxref=NCBI_GP:UUE98738.1;Name=UUE98738.1;Ontology_term=GO:0006355,GO:0016226;gbkey=CDS;go_process=regulation of transcription%2C DNA-templated|0006355||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369303.1;locus_tag=NDY24_02350;product=SUF system Fe-S cluster assembly regulator;protein_id=UUE98738.1;transl_table=11 CP098602.1 Genbank gene 518714 520171 . + . ID=gene-NDY24_02355;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=NDY24_02355 CP098602.1 Protein Homology CDS 518714 520171 . + 0 ID=cds-UUE98739.1;Parent=gene-NDY24_02355;Dbxref=NCBI_GP:UUE98739.1;Name=UUE98739.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902344.1;locus_tag=NDY24_02355;product=Fe-S cluster assembly protein SufB;protein_id=UUE98739.1;transl_table=11 CP098602.1 Genbank gene 520328 521092 . + . ID=gene-NDY24_02360;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=NDY24_02360 CP098602.1 Protein Homology CDS 520328 521092 . + 0 ID=cds-UUE98740.1;Parent=gene-NDY24_02360;Dbxref=NCBI_GP:UUE98740.1;Name=UUE98740.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157680.1;locus_tag=NDY24_02360;product=Fe-S cluster assembly ATPase SufC;protein_id=UUE98740.1;transl_table=11 CP098602.1 Genbank gene 521092 522354 . + . ID=gene-NDY24_02365;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=NDY24_02365 CP098602.1 Protein Homology CDS 521092 522354 . + 0 ID=cds-UUE98741.1;Parent=gene-NDY24_02365;Dbxref=NCBI_GP:UUE98741.1;Name=UUE98741.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufD;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090672.1;locus_tag=NDY24_02365;product=Fe-S cluster assembly protein SufD;protein_id=UUE98741.1;transl_table=11 CP098602.1 Genbank pseudogene 522351 523596 . + . ID=gene-NDY24_02370;Name=NDY24_02370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_02370;pseudo=true CP098602.1 Protein Homology CDS 522351 523596 . + 0 ID=cds-NDY24_02370;Parent=gene-NDY24_02370;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051933.1;locus_tag=NDY24_02370;product=cysteine desulfurase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 523802 524341 . + . ID=gene-NDY24_02375;Name=NDY24_02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02375 CP098602.1 Protein Homology CDS 523802 524341 . + 0 ID=cds-UUE98742.1;Parent=gene-NDY24_02375;Dbxref=NCBI_GP:UUE98742.1;Name=UUE98742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508447.1;locus_tag=NDY24_02375;product=GNAT family N-acetyltransferase;protein_id=UUE98742.1;transl_table=11 CP098602.1 Genbank gene 524338 524667 . + . ID=gene-NDY24_02380;Name=NDY24_02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02380 CP098602.1 Protein Homology CDS 524338 524667 . + 0 ID=cds-UUE98743.1;Parent=gene-NDY24_02380;Dbxref=NCBI_GP:UUE98743.1;Name=UUE98743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508448.1;locus_tag=NDY24_02380;product=non-heme iron oxygenase ferredoxin subunit;protein_id=UUE98743.1;transl_table=11 CP098602.1 Genbank gene 525583 527901 . + . ID=gene-NDY24_02385;Name=NDY24_02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02385 CP098602.1 Protein Homology CDS 525583 527901 . + 0 ID=cds-UUE98744.1;Parent=gene-NDY24_02385;Dbxref=NCBI_GP:UUE98744.1;Name=UUE98744.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802080.1;locus_tag=NDY24_02385;product=TonB-dependent siderophore receptor;protein_id=UUE98744.1;transl_table=11 CP098602.1 Genbank gene 527950 528636 . + . ID=gene-NDY24_02390;Name=NDY24_02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02390 CP098602.1 Protein Homology CDS 527950 528636 . + 0 ID=cds-UUE98745.1;Parent=gene-NDY24_02390;Dbxref=NCBI_GP:UUE98745.1;Name=UUE98745.1;Ontology_term=GO:0005506,GO:0016706,GO:0031418;gbkey=CDS;go_function=iron ion binding|0005506||IEA,2-oxoglutarate-dependent dioxygenase activity|0016706||IEA,L-ascorbic acid binding|0031418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037901.1;locus_tag=NDY24_02390;product=Fe2+-dependent dioxygenase;protein_id=UUE98745.1;transl_table=11 CP098602.1 Genbank pseudogene 528629 529345 . + . ID=gene-NDY24_02395;Name=NDY24_02395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_02395;pseudo=true CP098602.1 Protein Homology CDS 528629 529345 . + 0 ID=cds-NDY24_02395;Parent=gene-NDY24_02395;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157687.1;locus_tag=NDY24_02395;product=sel1 repeat family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 529396 530034 . + . ID=gene-NDY24_02400;Name=NDY24_02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02400 CP098602.1 Protein Homology CDS 529396 530034 . + 0 ID=cds-UUE98746.1;Parent=gene-NDY24_02400;Dbxref=NCBI_GP:UUE98746.1;Name=UUE98746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487779.1;locus_tag=NDY24_02400;product=PepSY-associated TM helix domain-containing protein;protein_id=UUE98746.1;transl_table=11 CP098602.1 Genbank pseudogene 530056 530572 . + . ID=gene-NDY24_02405;Name=NDY24_02405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_02405;pseudo=true CP098602.1 Protein Homology CDS 530056 530572 . + 0 ID=cds-NDY24_02405;Parent=gene-NDY24_02405;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163219.1;locus_tag=NDY24_02405;product=DUF2271 domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 530751 531554 . + . ID=gene-NDY24_02410;Name=NDY24_02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02410 CP098602.1 Protein Homology CDS 530751 531554 . + 0 ID=cds-UUE98747.1;Parent=gene-NDY24_02410;Dbxref=NCBI_GP:UUE98747.1;Name=UUE98747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237449.1;locus_tag=NDY24_02410;product=DUF4198 domain-containing protein;protein_id=UUE98747.1;transl_table=11 CP098602.1 Genbank gene 531622 532596 . + . ID=gene-NDY24_02415;Name=NDY24_02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02415 CP098602.1 Protein Homology CDS 531622 532596 . + 0 ID=cds-UUE98748.1;Parent=gene-NDY24_02415;Dbxref=NCBI_GP:UUE98748.1;Name=UUE98748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157691.1;locus_tag=NDY24_02415;product=FAD:protein FMN transferase;protein_id=UUE98748.1;transl_table=11 CP098602.1 Genbank pseudogene 532593 534324 . + . ID=gene-NDY24_02420;Name=NDY24_02420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_02420;pseudo=true CP098602.1 Protein Homology CDS 532593 534324 . + 0 ID=cds-NDY24_02420;Parent=gene-NDY24_02420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450669.1;locus_tag=NDY24_02420;product=sulfite reductase flavoprotein subunit alpha;pseudo=true;transl_table=11 CP098602.1 Genbank gene 534952 535692 . - . ID=gene-NDY24_02425;Name=NDY24_02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02425 CP098602.1 Protein Homology CDS 534952 535692 . - 0 ID=cds-UUE98749.1;Parent=gene-NDY24_02425;Dbxref=NCBI_GP:UUE98749.1;Name=UUE98749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051938.1;locus_tag=NDY24_02425;product=HutD family protein;protein_id=UUE98749.1;transl_table=11 CP098602.1 Genbank gene 536051 536458 . - . ID=gene-NDY24_02430;Name=NDY24_02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02430 CP098602.1 Protein Homology CDS 536051 536458 . - 0 ID=cds-UUE98750.1;Parent=gene-NDY24_02430;Dbxref=NCBI_GP:UUE98750.1;Name=UUE98750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157693.1;locus_tag=NDY24_02430;product=helix-hairpin-helix domain-containing protein;protein_id=UUE98750.1;transl_table=11 CP098602.1 Genbank gene 536605 538098 . + . ID=gene-NDY24_02435;Name=NDY24_02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02435 CP098602.1 Protein Homology CDS 536605 538098 . + 0 ID=cds-UUE98751.1;Parent=gene-NDY24_02435;Dbxref=NCBI_GP:UUE98751.1;Name=UUE98751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051939.1;locus_tag=NDY24_02435;product=M20 family metallopeptidase;protein_id=UUE98751.1;transl_table=11 CP098602.1 Genbank gene 538328 538600 . + . ID=gene-NDY24_02440;Name=NDY24_02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02440 CP098602.1 Protein Homology CDS 538328 538600 . + 0 ID=cds-UUE98752.1;Parent=gene-NDY24_02440;Dbxref=NCBI_GP:UUE98752.1;Name=UUE98752.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157695.1;locus_tag=NDY24_02440;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=UUE98752.1;transl_table=11 CP098602.1 Genbank gene 538658 539677 . + . ID=gene-NDY24_02445;Name=NDY24_02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02445 CP098602.1 Protein Homology CDS 538658 539677 . + 0 ID=cds-UUE98753.1;Parent=gene-NDY24_02445;Dbxref=NCBI_GP:UUE98753.1;Name=UUE98753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157696.1;locus_tag=NDY24_02445;product=phosphotransferase;protein_id=UUE98753.1;transl_table=11 CP098602.1 Genbank pseudogene 539674 540382 . + . ID=gene-NDY24_02450;Name=NDY24_02450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_02450;pseudo=true CP098602.1 Protein Homology CDS 539674 540382 . + 0 ID=cds-NDY24_02450;Parent=gene-NDY24_02450;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369254.1;locus_tag=NDY24_02450;product=nucleotidyltransferase family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 540574 541337 . + . ID=gene-NDY24_02455;Name=NDY24_02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02455 CP098602.1 Protein Homology CDS 540574 540889 . + 0 ID=cds-UUE98754.1;Parent=gene-NDY24_02455;Dbxref=NCBI_GP:UUE98754.1;Name=UUE98754.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=NDY24_02455;product=IS5 family transposase;protein_id=UUE98754.1;transl_table=11 CP098602.1 Protein Homology CDS 540889 541337 . + 2 ID=cds-UUE98754.1;Parent=gene-NDY24_02455;Dbxref=NCBI_GP:UUE98754.1;Name=UUE98754.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=NDY24_02455;product=IS5 family transposase;protein_id=UUE98754.1;transl_table=11 CP098602.1 Genbank gene 541574 542707 . + . ID=gene-NDY24_02460;Name=NDY24_02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02460 CP098602.1 Protein Homology CDS 541574 542707 . + 0 ID=cds-UUE98755.1;Parent=gene-NDY24_02460;Dbxref=NCBI_GP:UUE98755.1;Name=UUE98755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911798.1;locus_tag=NDY24_02460;product=phospholipase A;protein_id=UUE98755.1;transl_table=11 CP098602.1 Genbank gene 542878 543990 . + . ID=gene-NDY24_02465;Name=NDY24_02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02465 CP098602.1 Protein Homology CDS 542878 543990 . + 0 ID=cds-UUE98756.1;Parent=gene-NDY24_02465;Dbxref=NCBI_GP:UUE98756.1;Name=UUE98756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451913.1;locus_tag=NDY24_02465;product=sterol desaturase family protein;protein_id=UUE98756.1;transl_table=11 CP098602.1 Genbank gene 544450 545088 . - . ID=gene-NDY24_02470;Name=NDY24_02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02470 CP098602.1 Protein Homology CDS 544450 545088 . - 0 ID=cds-UUF00256.1;Parent=gene-NDY24_02470;Dbxref=NCBI_GP:UUF00256.1;Name=UUF00256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155731.1;locus_tag=NDY24_02470;product=carbonic anhydrase;protein_id=UUF00256.1;transl_table=11 CP098602.1 Genbank gene 545276 545911 . - . ID=gene-NDY24_02475;Name=NDY24_02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02475 CP098602.1 Protein Homology CDS 545276 545911 . - 0 ID=cds-UUE98757.1;Parent=gene-NDY24_02475;Dbxref=NCBI_GP:UUE98757.1;Name=UUE98757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483541.1;locus_tag=NDY24_02475;product=glutathione S-transferase family protein;protein_id=UUE98757.1;transl_table=11 CP098602.1 Genbank gene 546547 548064 . - . ID=gene-NDY24_02480;Name=NDY24_02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02480 CP098602.1 Protein Homology CDS 546547 548064 . - 0 ID=cds-UUE98758.1;Parent=gene-NDY24_02480;Dbxref=NCBI_GP:UUE98758.1;Name=UUE98758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483539.1;locus_tag=NDY24_02480;product=fumarate hydratase;protein_id=UUE98758.1;transl_table=11 CP098602.1 Genbank gene 548329 550209 . + . ID=gene-NDY24_02485;Name=NDY24_02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02485 CP098602.1 Protein Homology CDS 548329 550209 . + 0 ID=cds-UUE98759.1;Parent=gene-NDY24_02485;Dbxref=NCBI_GP:UUE98759.1;Name=UUE98759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911790.1;locus_tag=NDY24_02485;product=ABC transporter ATP-binding protein/permease;protein_id=UUE98759.1;transl_table=11 CP098602.1 Genbank gene 550440 551219 . + . ID=gene-NDY24_02490;Name=NDY24_02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02490 CP098602.1 Protein Homology CDS 550440 551219 . + 0 ID=cds-UUE98760.1;Parent=gene-NDY24_02490;Dbxref=NCBI_GP:UUE98760.1;Name=UUE98760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966679.1;locus_tag=NDY24_02490;product=ferredoxin--NADP reductase;protein_id=UUE98760.1;transl_table=11 CP098602.1 Genbank gene 551382 551867 . - . ID=gene-NDY24_02495;Name=NDY24_02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02495 CP098602.1 Protein Homology CDS 551382 551867 . - 0 ID=cds-UUE98761.1;Parent=gene-NDY24_02495;Dbxref=NCBI_GP:UUE98761.1;Name=UUE98761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438789.1;locus_tag=NDY24_02495;product=glutathione peroxidase;protein_id=UUE98761.1;transl_table=11 CP098602.1 Genbank gene 552364 554562 . + . ID=gene-NDY24_02500;Name=NDY24_02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02500 CP098602.1 Protein Homology CDS 552364 554562 . + 0 ID=cds-UUE98762.1;Parent=gene-NDY24_02500;Dbxref=NCBI_GP:UUE98762.1;Name=UUE98762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237816.1;locus_tag=NDY24_02500;product=M3 family metallopeptidase;protein_id=UUE98762.1;transl_table=11 CP098602.1 Genbank gene 554662 555162 . - . ID=gene-NDY24_02505;Name=NDY24_02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02505 CP098602.1 Protein Homology CDS 554662 555162 . - 0 ID=cds-UUE98763.1;Parent=gene-NDY24_02505;Dbxref=NCBI_GP:UUE98763.1;Name=UUE98763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571407.1;locus_tag=NDY24_02505;product=MarR family transcriptional regulator;protein_id=UUE98763.1;transl_table=11 CP098602.1 Genbank gene 555229 556074 . - . ID=gene-NDY24_02510;Name=NDY24_02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02510 CP098602.1 Protein Homology CDS 555229 556074 . - 0 ID=cds-UUE98764.1;Parent=gene-NDY24_02510;Dbxref=NCBI_GP:UUE98764.1;Name=UUE98764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089774.1;locus_tag=NDY24_02510;product=DUF3298 and DUF4163 domain-containing protein;protein_id=UUE98764.1;transl_table=11 CP098602.1 Genbank gene 556124 556411 . - . ID=gene-NDY24_02515;Name=NDY24_02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02515 CP098602.1 Protein Homology CDS 556124 556411 . - 0 ID=cds-UUE98765.1;Parent=gene-NDY24_02515;Dbxref=NCBI_GP:UUE98765.1;Name=UUE98765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483523.1;locus_tag=NDY24_02515;product=N-acetyltransferase;protein_id=UUE98765.1;transl_table=11 CP098602.1 Genbank gene 556639 556827 . + . ID=gene-NDY24_02520;Name=NDY24_02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02520 CP098602.1 Protein Homology CDS 556639 556827 . + 0 ID=cds-UUE98766.1;Parent=gene-NDY24_02520;Dbxref=NCBI_GP:UUE98766.1;Name=UUE98766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483521.1;locus_tag=NDY24_02520;product=hypothetical protein;protein_id=UUE98766.1;transl_table=11 CP098602.1 Genbank gene 556975 557583 . - . ID=gene-NDY24_02525;Name=NDY24_02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02525 CP098602.1 Protein Homology CDS 556975 557583 . - 0 ID=cds-UUE98767.1;Parent=gene-NDY24_02525;Dbxref=NCBI_GP:UUE98767.1;Name=UUE98767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300253.1;locus_tag=NDY24_02525;product=rhomboid family intramembrane serine protease;protein_id=UUE98767.1;transl_table=11 CP098602.1 Genbank gene 557591 559156 . - . ID=gene-NDY24_02530;Name=NDY24_02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02530 CP098602.1 Protein Homology CDS 557591 559156 . - 0 ID=cds-UUE98768.1;Parent=gene-NDY24_02530;Dbxref=NCBI_GP:UUE98768.1;Name=UUE98768.1;Ontology_term=GO:0015833,GO:0015333,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=peptide:proton symporter activity|0015333||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050921.1;locus_tag=NDY24_02530;product=oligopeptide:H+ symporter;protein_id=UUE98768.1;transl_table=11 CP098602.1 Genbank gene 559453 561222 . + . ID=gene-NDY24_02535;Name=NDY24_02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02535 CP098602.1 Protein Homology CDS 559453 561222 . + 0 ID=cds-UUE98769.1;Parent=gene-NDY24_02535;Dbxref=NCBI_GP:UUE98769.1;Name=UUE98769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160291.1;locus_tag=NDY24_02535;product=M14 family metallopeptidase;protein_id=UUE98769.1;transl_table=11 CP098602.1 Genbank gene 561346 563583 . + . ID=gene-NDY24_02540;Name=NDY24_02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02540 CP098602.1 Protein Homology CDS 561346 563583 . + 0 ID=cds-UUE98770.1;Parent=gene-NDY24_02540;Dbxref=NCBI_GP:UUE98770.1;Name=UUE98770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050919.1;locus_tag=NDY24_02540;product=beta-glucosidase;protein_id=UUE98770.1;transl_table=11 CP098602.1 Genbank gene 563726 563812 . + . ID=gene-NDY24_02545;Name=NDY24_02545;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_02545 CP098602.1 tRNAscan-SE tRNA 563726 563812 . + . ID=rna-NDY24_02545;Parent=gene-NDY24_02545;anticodon=(pos:563760..563762);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_02545;product=tRNA-Leu CP098602.1 tRNAscan-SE exon 563726 563812 . + . ID=exon-NDY24_02545-1;Parent=rna-NDY24_02545;anticodon=(pos:563760..563762);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_02545;product=tRNA-Leu CP098602.1 Genbank pseudogene 564013 564444 . + . ID=gene-NDY24_02550;Name=NDY24_02550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_02550;pseudo=true CP098602.1 Protein Homology CDS 564013 564444 . + 0 ID=cds-NDY24_02550;Parent=gene-NDY24_02550;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304548.1;locus_tag=NDY24_02550;product=YggN family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 564774 566354 . - . ID=gene-NDY24_02555;Name=NDY24_02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02555 CP098602.1 Protein Homology CDS 564774 566354 . - 0 ID=cds-UUE98771.1;Parent=gene-NDY24_02555;Dbxref=NCBI_GP:UUE98771.1;Name=UUE98771.1;Ontology_term=GO:0006855,GO:0009410,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005919973.1;locus_tag=NDY24_02555;product=DHA2 family efflux MFS transporter permease subunit;protein_id=UUE98771.1;transl_table=11 CP098602.1 Genbank gene 566361 567554 . - . ID=gene-NDY24_02560;Name=NDY24_02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02560 CP098602.1 Protein Homology CDS 566361 567554 . - 0 ID=cds-UUE98772.1;Parent=gene-NDY24_02560;Dbxref=NCBI_GP:UUE98772.1;Name=UUE98772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017168701.1;locus_tag=NDY24_02560;product=efflux RND transporter periplasmic adaptor subunit;protein_id=UUE98772.1;transl_table=11 CP098602.1 Genbank gene 567565 569052 . - . ID=gene-NDY24_02565;Name=NDY24_02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02565 CP098602.1 Protein Homology CDS 567565 569052 . - 0 ID=cds-UUF00257.1;Parent=gene-NDY24_02565;Dbxref=NCBI_GP:UUF00257.1;Name=UUF00257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155713.1;locus_tag=NDY24_02565;product=AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor;protein_id=UUF00257.1;transl_table=11 CP098602.1 Genbank gene 569076 569516 . - . ID=gene-NDY24_02570;Name=NDY24_02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02570 CP098602.1 Protein Homology CDS 569076 569516 . - 0 ID=cds-UUE98773.1;Parent=gene-NDY24_02570;Dbxref=NCBI_GP:UUE98773.1;Name=UUE98773.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089765.1;locus_tag=NDY24_02570;product=MarR family transcriptional regulator;protein_id=UUE98773.1;transl_table=11 CP098602.1 Genbank pseudogene 569640 570492 . + . ID=gene-NDY24_02575;Name=NDY24_02575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_02575;pseudo=true CP098602.1 Protein Homology CDS 569640 570492 . + 0 ID=cds-NDY24_02575;Parent=gene-NDY24_02575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463002.1;locus_tag=NDY24_02575;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 CP098602.1 Genbank gene 570555 572798 . + . ID=gene-NDY24_02580;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=NDY24_02580 CP098602.1 Protein Homology CDS 570555 572798 . + 0 ID=cds-UUE98774.1;Parent=gene-NDY24_02580;Dbxref=NCBI_GP:UUE98774.1;Name=UUE98774.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483492.1;locus_tag=NDY24_02580;product=DNA topoisomerase IV subunit A;protein_id=UUE98774.1;transl_table=11 CP098602.1 Genbank gene 573233 573889 . + . ID=gene-NDY24_02585;Name=NDY24_02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02585 CP098602.1 Protein Homology CDS 573233 573889 . + 0 ID=cds-UUE98775.1;Parent=gene-NDY24_02585;Dbxref=NCBI_GP:UUE98775.1;Name=UUE98775.1;Ontology_term=GO:0010038,GO:0008119;gbkey=CDS;go_function=thiopurine S-methyltransferase activity|0008119||IEA;go_process=response to metal ion|0010038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036586.1;locus_tag=NDY24_02585;product=thiopurine S-methyltransferase;protein_id=UUE98775.1;transl_table=11 CP098602.1 Genbank gene 574171 574656 . - . ID=gene-NDY24_02590;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=NDY24_02590 CP098602.1 Protein Homology CDS 574171 574656 . - 0 ID=cds-UUE98776.1;Parent=gene-NDY24_02590;Dbxref=NCBI_GP:UUE98776.1;Name=UUE98776.1;Ontology_term=GO:0006880,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular sequestering of iron ion|0006880||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911751.1;locus_tag=NDY24_02590;product=bacterioferritin;protein_id=UUE98776.1;transl_table=11 CP098602.1 Genbank gene 574802 577210 . + . ID=gene-NDY24_02595;Name=NDY24_02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02595 CP098602.1 Protein Homology CDS 574802 577210 . + 0 ID=cds-UUE98777.1;Parent=gene-NDY24_02595;Dbxref=NCBI_GP:UUE98777.1;Name=UUE98777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450829.1;locus_tag=NDY24_02595;product=penicillin acylase family protein;protein_id=UUE98777.1;transl_table=11 CP098602.1 Genbank gene 577670 579811 . + . ID=gene-NDY24_02600;Name=NDY24_02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02600 CP098602.1 Protein Homology CDS 577670 579811 . + 0 ID=cds-UUE98778.1;Parent=gene-NDY24_02600;Dbxref=NCBI_GP:UUE98778.1;Name=UUE98778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005925026.1;locus_tag=NDY24_02600;product=TonB-dependent receptor;protein_id=UUE98778.1;transl_table=11 CP098602.1 Genbank gene 580055 581104 . + . ID=gene-NDY24_02605;Name=NDY24_02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02605 CP098602.1 Protein Homology CDS 580055 581104 . + 0 ID=cds-UUE98779.1;Parent=gene-NDY24_02605;Dbxref=NCBI_GP:UUE98779.1;Name=UUE98779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507255.1;locus_tag=NDY24_02605;product=right-handed parallel beta-helix repeat-containing protein;protein_id=UUE98779.1;transl_table=11 CP098602.1 Genbank gene 581162 582856 . - . ID=gene-NDY24_02610;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=NDY24_02610 CP098602.1 Protein Homology CDS 581162 582856 . - 0 ID=cds-UUE98780.1;Parent=gene-NDY24_02610;Dbxref=NCBI_GP:UUE98780.1;Name=UUE98780.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988264.1;locus_tag=NDY24_02610;product=asparagine synthase B;protein_id=UUE98780.1;transl_table=11 CP098602.1 Genbank gene 583215 584087 . + . ID=gene-NDY24_02615;Name=NDY24_02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02615 CP098602.1 Protein Homology CDS 583215 584087 . + 0 ID=cds-UUE98781.1;Parent=gene-NDY24_02615;Dbxref=NCBI_GP:UUE98781.1;Name=UUE98781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016944180.1;locus_tag=NDY24_02615;product=sel1 repeat family protein;protein_id=UUE98781.1;transl_table=11 CP098602.1 Genbank gene 584282 585409 . - . ID=gene-NDY24_02620;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=NDY24_02620 CP098602.1 Protein Homology CDS 584282 585409 . - 0 ID=cds-UUE98782.1;Parent=gene-NDY24_02620;Dbxref=NCBI_GP:UUE98782.1;Name=UUE98782.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346903.1;locus_tag=NDY24_02620;product=succinyl-diaminopimelate desuccinylase;protein_id=UUE98782.1;transl_table=11 CP098602.1 Genbank gene 585454 585810 . - . ID=gene-NDY24_02625;Name=NDY24_02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02625 CP098602.1 Protein Homology CDS 585454 585810 . - 0 ID=cds-UUE98783.1;Parent=gene-NDY24_02625;Dbxref=NCBI_GP:UUE98783.1;Name=UUE98783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017912256.1;locus_tag=NDY24_02625;product=arsenate reductase;protein_id=UUE98783.1;transl_table=11 CP098602.1 Genbank gene 585812 586282 . - . ID=gene-NDY24_02630;Name=NDY24_02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02630 CP098602.1 Protein Homology CDS 585812 586282 . - 0 ID=cds-UUE98784.1;Parent=gene-NDY24_02630;Dbxref=NCBI_GP:UUE98784.1;Name=UUE98784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450835.1;locus_tag=NDY24_02630;product=hypothetical protein;protein_id=UUE98784.1;transl_table=11 CP098602.1 Genbank gene 586279 587451 . - . ID=gene-NDY24_02635;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=NDY24_02635 CP098602.1 Protein Homology CDS 586279 587451 . - 0 ID=cds-UUE98785.1;Parent=gene-NDY24_02635;Dbxref=NCBI_GP:UUE98785.1;Name=UUE98785.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576699.1;locus_tag=NDY24_02635;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=UUE98785.1;transl_table=11 CP098602.1 Genbank gene 587468 590077 . - . ID=gene-NDY24_02640;Name=NDY24_02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02640 CP098602.1 Protein Homology CDS 587468 590077 . - 0 ID=cds-UUE98786.1;Parent=gene-NDY24_02640;Dbxref=NCBI_GP:UUE98786.1;Name=UUE98786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810763.1;locus_tag=NDY24_02640;product=[protein-PII] uridylyltransferase;protein_id=UUE98786.1;transl_table=11 CP098602.1 Genbank gene 590074 590850 . - . ID=gene-NDY24_02645;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=NDY24_02645 CP098602.1 Protein Homology CDS 590074 590850 . - 0 ID=cds-UUE98787.1;Parent=gene-NDY24_02645;Dbxref=NCBI_GP:UUE98787.1;Name=UUE98787.1;Ontology_term=GO:0006464;gbkey=CDS;gene=map;go_process=cellular protein modification process|0006464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366184.1;locus_tag=NDY24_02645;product=type I methionyl aminopeptidase;protein_id=UUE98787.1;transl_table=11 CP098602.1 Genbank gene 591141 591692 . + . ID=gene-NDY24_02650;Name=NDY24_02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02650 CP098602.1 Protein Homology CDS 591141 591692 . + 0 ID=cds-UUE98788.1;Parent=gene-NDY24_02650;Dbxref=NCBI_GP:UUE98788.1;Name=UUE98788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576696.1;locus_tag=NDY24_02650;product=spore coat U domain-containing protein;protein_id=UUE98788.1;transl_table=11 CP098602.1 Genbank gene 591701 592471 . + . ID=gene-NDY24_02655;Name=NDY24_02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02655 CP098602.1 Protein Homology CDS 591701 592471 . + 0 ID=cds-UUE98789.1;Parent=gene-NDY24_02655;Dbxref=NCBI_GP:UUE98789.1;Name=UUE98789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089755.1;locus_tag=NDY24_02655;product=molecular chaperone;protein_id=UUE98789.1;transl_table=11 CP098602.1 Genbank gene 592488 594839 . + . ID=gene-NDY24_02660;Name=NDY24_02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02660 CP098602.1 Protein Homology CDS 592488 594839 . + 0 ID=cds-UUE98790.1;Parent=gene-NDY24_02660;Dbxref=NCBI_GP:UUE98790.1;Name=UUE98790.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169461.1;locus_tag=NDY24_02660;product=fimbria/pilus outer membrane usher protein;protein_id=UUE98790.1;transl_table=11 CP098602.1 Genbank gene 594836 595879 . + . ID=gene-NDY24_02665;Name=NDY24_02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02665 CP098602.1 Protein Homology CDS 594836 595879 . + 0 ID=cds-UUE98791.1;Parent=gene-NDY24_02665;Dbxref=NCBI_GP:UUE98791.1;Name=UUE98791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036570.1;locus_tag=NDY24_02665;product=spore coat U domain-containing protein;protein_id=UUE98791.1;transl_table=11 CP098602.1 Genbank gene 595928 596266 . + . ID=gene-NDY24_02670;Name=NDY24_02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02670 CP098602.1 Protein Homology CDS 595928 596266 . + 0 ID=cds-UUE98792.1;Parent=gene-NDY24_02670;Dbxref=NCBI_GP:UUE98792.1;Name=UUE98792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849735.1;locus_tag=NDY24_02670;product=hypothetical protein;protein_id=UUE98792.1;transl_table=11 CP098602.1 Genbank gene 596269 596976 . + . ID=gene-NDY24_02675;Name=NDY24_02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02675 CP098602.1 Protein Homology CDS 596269 596976 . + 0 ID=cds-UUE98793.1;Parent=gene-NDY24_02675;Dbxref=NCBI_GP:UUE98793.1;Name=UUE98793.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160015.1;locus_tag=NDY24_02675;product=fimbria/pilus periplasmic chaperone;protein_id=UUE98793.1;transl_table=11 CP098602.1 Genbank gene 597625 598464 . + . ID=gene-NDY24_02680;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=NDY24_02680 CP098602.1 Protein Homology CDS 597625 598464 . + 0 ID=cds-UUE98794.1;Parent=gene-NDY24_02680;Dbxref=NCBI_GP:UUE98794.1;Name=UUE98794.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269915.1;locus_tag=NDY24_02680;product=30S ribosomal protein S2;protein_id=UUE98794.1;transl_table=11 CP098602.1 Genbank gene 598635 599513 . + . ID=gene-NDY24_02685;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=NDY24_02685 CP098602.1 Protein Homology CDS 598635 599513 . + 0 ID=cds-UUE98795.1;Parent=gene-NDY24_02685;Dbxref=NCBI_GP:UUE98795.1;Name=UUE98795.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007962895.1;locus_tag=NDY24_02685;product=translation elongation factor Ts;protein_id=UUE98795.1;transl_table=11 CP098602.1 Genbank gene 599793 601316 . + . ID=gene-NDY24_02690;Name=NDY24_02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02690 CP098602.1 Protein Homology CDS 599793 601316 . + 0 ID=cds-UUE98796.1;Parent=gene-NDY24_02690;Dbxref=NCBI_GP:UUE98796.1;Name=UUE98796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438815.1;locus_tag=NDY24_02690;product=GGDEF domain-containing protein;protein_id=UUE98796.1;transl_table=11 CP098602.1 Genbank gene 601424 602146 . + . ID=gene-NDY24_02695;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=NDY24_02695 CP098602.1 Protein Homology CDS 601424 602146 . + 0 ID=cds-UUE98797.1;Parent=gene-NDY24_02695;Dbxref=NCBI_GP:UUE98797.1;Name=UUE98797.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366166.1;locus_tag=NDY24_02695;product=UMP kinase;protein_id=UUE98797.1;transl_table=11 CP098602.1 Genbank gene 602344 602901 . + . ID=gene-NDY24_02700;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=NDY24_02700 CP098602.1 Protein Homology CDS 602344 602901 . + 0 ID=cds-UUE98798.1;Parent=gene-NDY24_02700;Dbxref=NCBI_GP:UUE98798.1;Name=UUE98798.1;Ontology_term=GO:0006412,GO:0008135,GO:0005737;gbkey=CDS;gene=frr;go_component=cytoplasm|0005737||IEA;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036562.1;locus_tag=NDY24_02700;product=ribosome recycling factor;protein_id=UUE98798.1;transl_table=11 CP098602.1 Genbank gene 602919 603680 . + . ID=gene-NDY24_02705;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=NDY24_02705 CP098602.1 Protein Homology CDS 602919 603680 . + 0 ID=cds-UUE98799.1;Parent=gene-NDY24_02705;Dbxref=NCBI_GP:UUE98799.1;Name=UUE98799.1;Ontology_term=GO:0009252,GO:0005737;gbkey=CDS;gene=uppS;go_component=cytoplasm|0005737||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346894.1;locus_tag=NDY24_02705;product=polyprenyl diphosphate synthase;protein_id=UUE98799.1;transl_table=11 CP098602.1 Genbank gene 603677 604504 . + . ID=gene-NDY24_02710;Name=NDY24_02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02710 CP098602.1 Protein Homology CDS 603677 604504 . + 0 ID=cds-UUE98800.1;Parent=gene-NDY24_02710;Dbxref=NCBI_GP:UUE98800.1;Name=UUE98800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258695.1;locus_tag=NDY24_02710;product=phosphatidate cytidylyltransferase;protein_id=UUE98800.1;transl_table=11 CP098602.1 Genbank gene 604507 605697 . + . ID=gene-NDY24_02715;Name=NDY24_02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02715 CP098602.1 Protein Homology CDS 604507 605697 . + 0 ID=cds-UUE98801.1;Parent=gene-NDY24_02715;Dbxref=NCBI_GP:UUE98801.1;Name=UUE98801.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485371.1;locus_tag=NDY24_02715;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=UUE98801.1;transl_table=11 CP098602.1 Genbank gene 605724 607070 . + . ID=gene-NDY24_02720;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=NDY24_02720 CP098602.1 Protein Homology CDS 605724 607070 . + 0 ID=cds-UUE98802.1;Parent=gene-NDY24_02720;Dbxref=NCBI_GP:UUE98802.1;Name=UUE98802.1;Ontology_term=GO:0006508,GO:0004222,GO:0016021;gbkey=CDS;gene=rseP;go_component=integral component of membrane|0016021||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304858.1;locus_tag=NDY24_02720;product=RIP metalloprotease RseP;protein_id=UUE98802.1;transl_table=11 CP098602.1 Genbank gene 607154 609520 . + . ID=gene-NDY24_02725;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=NDY24_02725 CP098602.1 Protein Homology CDS 607154 609520 . + 0 ID=cds-UUE98803.1;Parent=gene-NDY24_02725;Dbxref=NCBI_GP:UUE98803.1;Name=UUE98803.1;Ontology_term=GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117511.1;locus_tag=NDY24_02725;product=outer membrane protein assembly factor BamA;protein_id=UUE98803.1;transl_table=11 CP098602.1 Genbank gene 609600 609791 . - . ID=gene-NDY24_02730;Name=NDY24_02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02730 CP098602.1 Protein Homology CDS 609600 609791 . - 0 ID=cds-UUE98804.1;Parent=gene-NDY24_02730;Dbxref=NCBI_GP:UUE98804.1;Name=UUE98804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159402.1;locus_tag=NDY24_02730;product=hypothetical protein;protein_id=UUE98804.1;transl_table=11 CP098602.1 Genbank gene 609919 610932 . + . ID=gene-NDY24_02735;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=NDY24_02735 CP098602.1 Protein Homology CDS 609919 610932 . + 0 ID=cds-UUE98805.1;Parent=gene-NDY24_02735;Dbxref=NCBI_GP:UUE98805.1;Name=UUE98805.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965614.1;locus_tag=NDY24_02735;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=UUE98805.1;transl_table=11 CP098602.1 Genbank gene 610929 611387 . + . ID=gene-NDY24_02740;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=NDY24_02740 CP098602.1 Protein Homology CDS 610929 611387 . + 0 ID=cds-UUE98806.1;Parent=gene-NDY24_02740;Dbxref=NCBI_GP:UUE98806.1;Name=UUE98806.1;Ontology_term=GO:0006633,GO:0016836;gbkey=CDS;gene=fabZ;go_function=hydro-lyase activity|0016836||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380391.1;locus_tag=NDY24_02740;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=UUE98806.1;transl_table=11 CP098602.1 Genbank gene 611413 612204 . + . ID=gene-NDY24_02745;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=NDY24_02745 CP098602.1 Protein Homology CDS 611413 612204 . + 0 ID=cds-UUE98807.1;Parent=gene-NDY24_02745;Dbxref=NCBI_GP:UUE98807.1;Name=UUE98807.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507232.1;locus_tag=NDY24_02745;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=UUE98807.1;transl_table=11 CP098602.1 Genbank gene 612231 613520 . + . ID=gene-NDY24_02750;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=NDY24_02750 CP098602.1 Protein Homology CDS 612231 613520 . + 0 ID=cds-UUF00258.1;Parent=gene-NDY24_02750;Dbxref=NCBI_GP:UUF00258.1;Name=UUF00258.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452822.1;locus_tag=NDY24_02750;product=lipid-A-disaccharide synthase;protein_id=UUF00258.1;transl_table=11 CP098602.1 Genbank gene 613517 614245 . + . ID=gene-NDY24_02755;Name=NDY24_02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02755 CP098602.1 Protein Homology CDS 613517 614245 . + 0 ID=cds-UUE98808.1;Parent=gene-NDY24_02755;Dbxref=NCBI_GP:UUE98808.1;Name=UUE98808.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507230.1;locus_tag=NDY24_02755;product=ribonuclease HII;protein_id=UUE98808.1;transl_table=11 CP098602.1 Genbank gene 614532 618122 . + . ID=gene-NDY24_02760;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=NDY24_02760 CP098602.1 Protein Homology CDS 614532 618122 . + 0 ID=cds-UUE98809.1;Parent=gene-NDY24_02760;Dbxref=NCBI_GP:UUE98809.1;Name=UUE98809.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902404.1;locus_tag=NDY24_02760;product=DNA polymerase III subunit alpha;protein_id=UUE98809.1;transl_table=11 CP098602.1 Genbank gene 618280 619239 . + . ID=gene-NDY24_02765;Name=NDY24_02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02765 CP098602.1 Protein Homology CDS 618280 619239 . + 0 ID=cds-UUE98810.1;Parent=gene-NDY24_02765;Dbxref=NCBI_GP:UUE98810.1;Name=UUE98810.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008578271.1;locus_tag=NDY24_02765;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=UUE98810.1;transl_table=11 CP098602.1 Genbank gene 619313 620068 . + . ID=gene-NDY24_02770;Name=NDY24_02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02770 CP098602.1 Protein Homology CDS 619313 620068 . + 0 ID=cds-UUE98811.1;Parent=gene-NDY24_02770;Dbxref=NCBI_GP:UUE98811.1;Name=UUE98811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849943.1;locus_tag=NDY24_02770;product=tetratricopeptide repeat protein;protein_id=UUE98811.1;transl_table=11 CP098602.1 Genbank gene 620138 620584 . - . ID=gene-NDY24_02775;Name=NDY24_02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02775 CP098602.1 Protein Homology CDS 620138 620584 . - 0 ID=cds-UUE98812.1;Parent=gene-NDY24_02775;Dbxref=NCBI_GP:UUE98812.1;Name=UUE98812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902407.1;locus_tag=NDY24_02775;product=CopD family protein;protein_id=UUE98812.1;transl_table=11 CP098602.1 Genbank gene 620658 621260 . + . ID=gene-NDY24_02780;Name=NDY24_02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02780 CP098602.1 Protein Homology CDS 620658 621260 . + 0 ID=cds-UUE98813.1;Parent=gene-NDY24_02780;Dbxref=NCBI_GP:UUE98813.1;Name=UUE98813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965597.1;locus_tag=NDY24_02780;product=class I SAM-dependent methyltransferase;protein_id=UUE98813.1;transl_table=11 CP098602.1 Genbank gene 621638 622981 . + . ID=gene-NDY24_02785;Name=NDY24_02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02785 CP098602.1 Protein Homology CDS 621638 622981 . + 0 ID=cds-UUE98814.1;Parent=gene-NDY24_02785;Dbxref=NCBI_GP:UUE98814.1;Name=UUE98814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472356.1;locus_tag=NDY24_02785;product=polyhydroxyalkanoate depolymerase;protein_id=UUE98814.1;transl_table=11 CP098602.1 Genbank gene 624018 624929 . - . ID=gene-NDY24_02790;Name=NDY24_02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02790 CP098602.1 Protein Homology CDS 624018 624929 . - 0 ID=cds-UUE98815.1;Parent=gene-NDY24_02790;Dbxref=NCBI_GP:UUE98815.1;Name=UUE98815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451071.1;locus_tag=NDY24_02790;product=sensor domain-containing protein;protein_id=UUE98815.1;transl_table=11 CP098602.1 Genbank gene 624926 625288 . - . ID=gene-NDY24_02795;Name=NDY24_02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02795 CP098602.1 Protein Homology CDS 624926 625288 . - 0 ID=cds-UUE98816.1;Parent=gene-NDY24_02795;Dbxref=NCBI_GP:UUE98816.1;Name=UUE98816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451072.1;locus_tag=NDY24_02795;product=PadR family transcriptional regulator;protein_id=UUE98816.1;transl_table=11 CP098602.1 Genbank gene 625623 627185 . + . ID=gene-NDY24_02800;Name=NDY24_02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02800 CP098602.1 Protein Homology CDS 625623 627185 . + 0 ID=cds-UUE98817.1;Parent=gene-NDY24_02800;Dbxref=NCBI_GP:UUE98817.1;Name=UUE98817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155674.1;locus_tag=NDY24_02800;product=alginate export family protein;protein_id=UUE98817.1;transl_table=11 CP098602.1 Genbank pseudogene 627719 628641 . + . ID=gene-NDY24_02805;Name=NDY24_02805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_02805;pseudo=true CP098602.1 Protein Homology CDS 627719 628641 . + 0 ID=cds-NDY24_02805;Parent=gene-NDY24_02805;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012509957.1;locus_tag=NDY24_02805;product=IS110 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 629262 630629 . - . ID=gene-NDY24_02810;Name=NDY24_02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02810 CP098602.1 Protein Homology CDS 629262 630629 . - 0 ID=cds-UUE98818.1;Parent=gene-NDY24_02810;Dbxref=NCBI_GP:UUE98818.1;Name=UUE98818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450225.1;locus_tag=NDY24_02810;product=hypothetical protein;protein_id=UUE98818.1;transl_table=11 CP098602.1 Genbank gene 630785 631459 . + . ID=gene-NDY24_02815;Name=NDY24_02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02815 CP098602.1 Protein Homology CDS 630785 631459 . + 0 ID=cds-UUE98819.1;Parent=gene-NDY24_02815;Dbxref=NCBI_GP:UUE98819.1;Name=UUE98819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380413.1;locus_tag=NDY24_02815;product=DUF502 domain-containing protein;protein_id=UUE98819.1;transl_table=11 CP098602.1 Genbank gene 631464 632240 . + . ID=gene-NDY24_02820;Name=NDY24_02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02820 CP098602.1 Protein Homology CDS 631464 632240 . + 0 ID=cds-UUE98820.1;Parent=gene-NDY24_02820;Dbxref=NCBI_GP:UUE98820.1;Name=UUE98820.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155671.1;locus_tag=NDY24_02820;product=queuosine precursor transporter;protein_id=UUE98820.1;transl_table=11 CP098602.1 Genbank gene 632469 633059 . + . ID=gene-NDY24_02825;Name=NDY24_02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02825 CP098602.1 Protein Homology CDS 632469 633059 . + 0 ID=cds-UUE98821.1;Parent=gene-NDY24_02825;Dbxref=NCBI_GP:UUE98821.1;Name=UUE98821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450222.1;locus_tag=NDY24_02825;product=LysE family translocator;protein_id=UUE98821.1;transl_table=11 CP098602.1 Genbank gene 633025 633921 . - . ID=gene-NDY24_02830;Name=NDY24_02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02830 CP098602.1 Protein Homology CDS 633025 633921 . - 0 ID=cds-UUE98822.1;Parent=gene-NDY24_02830;Dbxref=NCBI_GP:UUE98822.1;Name=UUE98822.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014376.2;locus_tag=NDY24_02830;product=AraC family transcriptional regulator;protein_id=UUE98822.1;transl_table=11 CP098602.1 Genbank pseudogene 634073 636007 . + . ID=gene-NDY24_02835;Name=NDY24_02835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_02835;pseudo=true CP098602.1 Protein Homology CDS 634073 636007 . + 0 ID=cds-NDY24_02835;Parent=gene-NDY24_02835;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346878.1;locus_tag=NDY24_02835;product=DUF885 family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 636028 636990 . - . ID=gene-NDY24_02840;Name=mmuM;gbkey=Gene;gene=mmuM;gene_biotype=protein_coding;locus_tag=NDY24_02840 CP098602.1 Protein Homology CDS 636028 636990 . - 0 ID=cds-UUE98823.1;Parent=gene-NDY24_02840;Dbxref=NCBI_GP:UUE98823.1;Name=UUE98823.1;Ontology_term=GO:0009086,GO:0047150;gbkey=CDS;gene=mmuM;go_function=betaine-homocysteine S-methyltransferase activity|0047150||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008578257.1;locus_tag=NDY24_02840;product=homocysteine S-methyltransferase;protein_id=UUE98823.1;transl_table=11 CP098602.1 Genbank gene 636987 638384 . - . ID=gene-NDY24_02845;Name=mmuP;gbkey=Gene;gene=mmuP;gene_biotype=protein_coding;locus_tag=NDY24_02845 CP098602.1 Protein Homology CDS 636987 638384 . - 0 ID=cds-UUE98824.1;Parent=gene-NDY24_02845;Dbxref=NCBI_GP:UUE98824.1;Name=UUE98824.1;Ontology_term=GO:0055085;gbkey=CDS;gene=mmuP;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965585.1;locus_tag=NDY24_02845;product=S-methylmethionine permease;protein_id=UUE98824.1;transl_table=11 CP098602.1 Genbank gene 638795 639184 . + . ID=gene-NDY24_02850;Name=NDY24_02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02850 CP098602.1 Protein Homology CDS 638795 639184 . + 0 ID=cds-UUE98825.1;Parent=gene-NDY24_02850;Dbxref=NCBI_GP:UUE98825.1;Name=UUE98825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159538.1;locus_tag=NDY24_02850;product=VOC family protein;protein_id=UUE98825.1;transl_table=11 CP098602.1 Genbank gene 639392 640285 . + . ID=gene-NDY24_02855;Name=NDY24_02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02855 CP098602.1 Protein Homology CDS 639392 640285 . + 0 ID=cds-UUE98826.1;Parent=gene-NDY24_02855;Dbxref=NCBI_GP:UUE98826.1;Name=UUE98826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904110.1;locus_tag=NDY24_02855;product=ABC transporter ATP-binding protein;protein_id=UUE98826.1;transl_table=11 CP098602.1 Genbank gene 640298 643888 . + . ID=gene-NDY24_02860;Name=NDY24_02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02860 CP098602.1 Protein Homology CDS 640298 643888 . + 0 ID=cds-UUE98827.1;Parent=gene-NDY24_02860;Dbxref=NCBI_GP:UUE98827.1;Name=UUE98827.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450215.1;locus_tag=NDY24_02860;product=ABC transporter permease subunit;protein_id=UUE98827.1;transl_table=11 CP098602.1 Genbank gene 643994 644443 . + . ID=gene-NDY24_02865;Name=NDY24_02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02865 CP098602.1 Protein Homology CDS 643994 644443 . + 0 ID=cds-UUE98828.1;Parent=gene-NDY24_02865;Dbxref=NCBI_GP:UUE98828.1;Name=UUE98828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237831.1;locus_tag=NDY24_02865;product=DUF2147 domain-containing protein;protein_id=UUE98828.1;transl_table=11 CP098602.1 Genbank gene 644699 646789 . + . ID=gene-NDY24_02870;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=NDY24_02870 CP098602.1 Protein Homology CDS 644699 646789 . + 0 ID=cds-UUE98829.1;Parent=gene-NDY24_02870;Dbxref=NCBI_GP:UUE98829.1;Name=UUE98829.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304414.1;locus_tag=NDY24_02870;product=methionine--tRNA ligase;protein_id=UUE98829.1;transl_table=11 CP098602.1 Genbank gene 647243 647833 . + . ID=gene-NDY24_02875;Name=NDY24_02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02875 CP098602.1 Protein Homology CDS 647243 647833 . + 0 ID=cds-UUE98830.1;Parent=gene-NDY24_02875;Dbxref=NCBI_GP:UUE98830.1;Name=UUE98830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015462990.1;locus_tag=NDY24_02875;product=HAD-IB family hydrolase;protein_id=UUE98830.1;transl_table=11 CP098602.1 Genbank gene 647835 648266 . + . ID=gene-NDY24_02880;Name=rnfB;gbkey=Gene;gene=rnfB;gene_biotype=protein_coding;locus_tag=NDY24_02880 CP098602.1 Protein Homology CDS 647835 648266 . + 0 ID=cds-UUE98831.1;Parent=gene-NDY24_02880;Dbxref=NCBI_GP:UUE98831.1;Name=UUE98831.1;gbkey=CDS;gene=rnfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450211.1;locus_tag=NDY24_02880;product=Rnf electron transport complex subunit RnfB;protein_id=UUE98831.1;transl_table=11 CP098602.1 Genbank gene 648384 649169 . + . ID=gene-NDY24_02885;Name=NDY24_02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02885 CP098602.1 Protein Homology CDS 648384 649169 . + 0 ID=cds-UUE98832.1;Parent=gene-NDY24_02885;Dbxref=NCBI_GP:UUE98832.1;Name=UUE98832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304522.1;locus_tag=NDY24_02885;product=hypothetical protein;protein_id=UUE98832.1;transl_table=11 CP098602.1 Genbank gene 649255 649623 . + . ID=gene-NDY24_02890;Name=NDY24_02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02890 CP098602.1 Protein Homology CDS 649255 649623 . + 0 ID=cds-UUE98833.1;Parent=gene-NDY24_02890;Dbxref=NCBI_GP:UUE98833.1;Name=UUE98833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366091.1;locus_tag=NDY24_02890;product=DUF4345 domain-containing protein;protein_id=UUE98833.1;transl_table=11 CP098602.1 Genbank gene 649682 650245 . + . ID=gene-NDY24_02895;Name=NDY24_02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02895 CP098602.1 Protein Homology CDS 649682 650245 . + 0 ID=cds-UUE98834.1;Parent=gene-NDY24_02895;Dbxref=NCBI_GP:UUE98834.1;Name=UUE98834.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription%2C initiation|0006352||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993590.1;locus_tag=NDY24_02895;product=sigma-70 family RNA polymerase sigma factor;protein_id=UUE98834.1;transl_table=11 CP098602.1 Genbank pseudogene 650242 651079 . + . ID=gene-NDY24_02900;Name=NDY24_02900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_02900;pseudo=true CP098602.1 Protein Homology CDS 650242 651079 . + 0 ID=cds-NDY24_02900;Parent=gene-NDY24_02900;Note=frameshifted;Ontology_term=GO:0005886,GO:0016021;gbkey=CDS;go_component=plasma membrane|0005886||IEA,integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485441.1;locus_tag=NDY24_02900;product=anti-sigma factor;pseudo=true;transl_table=11 CP098602.1 Genbank gene 651303 652301 . + . ID=gene-NDY24_02905;Name=NDY24_02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02905 CP098602.1 Protein Homology CDS 651303 652301 . + 0 ID=cds-UUE98835.1;Parent=gene-NDY24_02905;Dbxref=NCBI_GP:UUE98835.1;Name=UUE98835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166055.1;locus_tag=NDY24_02905;product=acyl-CoA desaturase;protein_id=UUE98835.1;transl_table=11 CP098602.1 Genbank gene 652298 653548 . + . ID=gene-NDY24_02910;Name=NDY24_02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02910 CP098602.1 Protein Homology CDS 652298 653548 . + 0 ID=cds-UUE98836.1;Parent=gene-NDY24_02910;Dbxref=NCBI_GP:UUE98836.1;Name=UUE98836.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155653.1;locus_tag=NDY24_02910;product=FAD-dependent oxidoreductase;protein_id=UUE98836.1;transl_table=11 CP098602.1 Genbank pseudogene 653548 654425 . + . ID=gene-NDY24_02915;Name=NDY24_02915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_02915;pseudo=true CP098602.1 Protein Homology CDS 653548 654425 . + 0 ID=cds-NDY24_02915;Parent=gene-NDY24_02915;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485446.1;locus_tag=NDY24_02915;product=DUF1365 domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 654422 655717 . + . ID=gene-NDY24_02920;Name=NDY24_02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02920 CP098602.1 Protein Homology CDS 654422 655717 . + 0 ID=cds-UUE98837.1;Parent=gene-NDY24_02920;Dbxref=NCBI_GP:UUE98837.1;Name=UUE98837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380444.1;locus_tag=NDY24_02920;product=cyclopropane-fatty-acyl-phospholipid synthase family protein;protein_id=UUE98837.1;transl_table=11 CP098602.1 Genbank gene 655714 656259 . + . ID=gene-NDY24_02925;Name=NDY24_02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02925 CP098602.1 Protein Homology CDS 655714 656259 . + 0 ID=cds-UUE98838.1;Parent=gene-NDY24_02925;Dbxref=NCBI_GP:UUE98838.1;Name=UUE98838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451779.1;locus_tag=NDY24_02925;product=DUF2878 domain-containing protein;protein_id=UUE98838.1;transl_table=11 CP098602.1 Genbank gene 656256 657038 . + . ID=gene-NDY24_02930;Name=NDY24_02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02930 CP098602.1 Protein Homology CDS 656256 657038 . + 0 ID=cds-UUE98839.1;Parent=gene-NDY24_02930;Dbxref=NCBI_GP:UUE98839.1;Name=UUE98839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967316.1;locus_tag=NDY24_02930;product=DUF1295 domain-containing protein;protein_id=UUE98839.1;transl_table=11 CP098602.1 Genbank pseudogene 657056 658126 . + . ID=gene-NDY24_02935;Name=NDY24_02935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_02935;pseudo=true CP098602.1 Protein Homology CDS 657056 658126 . + 0 ID=cds-NDY24_02935;Parent=gene-NDY24_02935;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924864.1;locus_tag=NDY24_02935;product=cyclopropane-fatty-acyl-phospholipid synthase family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 658116 658274 . - . ID=gene-NDY24_02940;Name=NDY24_02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02940 CP098602.1 GeneMarkS-2+ CDS 658116 658274 . - 0 ID=cds-UUE98840.1;Parent=gene-NDY24_02940;Dbxref=NCBI_GP:UUE98840.1;Name=UUE98840.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_02940;product=hypothetical protein;protein_id=UUE98840.1;transl_table=11 CP098602.1 Genbank gene 658372 658719 . - . ID=gene-NDY24_02945;Name=NDY24_02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02945 CP098602.1 Protein Homology CDS 658372 658719 . - 0 ID=cds-UUE98841.1;Parent=gene-NDY24_02945;Dbxref=NCBI_GP:UUE98841.1;Name=UUE98841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008578235.1;locus_tag=NDY24_02945;product=RidA family protein;protein_id=UUE98841.1;transl_table=11 CP098602.1 Genbank gene 658730 659437 . - . ID=gene-NDY24_02950;Name=NDY24_02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02950 CP098602.1 Protein Homology CDS 658730 659437 . - 0 ID=cds-UUE98842.1;Parent=gene-NDY24_02950;Dbxref=NCBI_GP:UUE98842.1;Name=UUE98842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967322.1;locus_tag=NDY24_02950;product=DUF998 domain-containing protein;protein_id=UUE98842.1;transl_table=11 CP098602.1 Genbank gene 659696 662260 . + . ID=gene-NDY24_02955;Name=mprF;gbkey=Gene;gene=mprF;gene_biotype=protein_coding;locus_tag=NDY24_02955 CP098602.1 Protein Homology CDS 659696 662260 . + 0 ID=cds-UUE98843.1;Parent=gene-NDY24_02955;Dbxref=NCBI_GP:UUE98843.1;Name=UUE98843.1;gbkey=CDS;gene=mprF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485461.1;locus_tag=NDY24_02955;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;protein_id=UUE98843.1;transl_table=11 CP098602.1 Genbank gene 662475 663848 . - . ID=gene-NDY24_02960;Name=NDY24_02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02960 CP098602.1 Protein Homology CDS 662475 663848 . - 0 ID=cds-UUE98844.1;Parent=gene-NDY24_02960;Dbxref=NCBI_GP:UUE98844.1;Name=UUE98844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485462.1;locus_tag=NDY24_02960;product=virulence factor family protein;protein_id=UUE98844.1;transl_table=11 CP098602.1 Genbank gene 663920 664102 . - . ID=gene-NDY24_02965;Name=NDY24_02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02965 CP098602.1 Protein Homology CDS 663920 664102 . - 0 ID=cds-UUE98845.1;Parent=gene-NDY24_02965;Dbxref=NCBI_GP:UUE98845.1;Name=UUE98845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507194.1;locus_tag=NDY24_02965;product=oxidoreductase-like domain-containing protein;protein_id=UUE98845.1;transl_table=11 CP098602.1 Genbank gene 664165 664770 . - . ID=gene-NDY24_02970;Name=NDY24_02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02970 CP098602.1 Protein Homology CDS 664165 664770 . - 0 ID=cds-UUE98846.1;Parent=gene-NDY24_02970;Dbxref=NCBI_GP:UUE98846.1;Name=UUE98846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974397.1;locus_tag=NDY24_02970;product=hypothetical protein;protein_id=UUE98846.1;transl_table=11 CP098602.1 Genbank gene 664806 665408 . - . ID=gene-NDY24_02975;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=NDY24_02975 CP098602.1 Protein Homology CDS 664806 665408 . - 0 ID=cds-UUE98847.1;Parent=gene-NDY24_02975;Dbxref=NCBI_GP:UUE98847.1;Name=UUE98847.1;Ontology_term=GO:0008033,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'-5'-RNA ligase activity|0008664||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408284.1;locus_tag=NDY24_02975;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=UUE98847.1;transl_table=11 CP098602.1 Genbank pseudogene 665680 666132 . - . ID=gene-NDY24_02980;Name=NDY24_02980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_02980;pseudo=true CP098602.1 Protein Homology CDS 665680 666132 . - 0 ID=cds-NDY24_02980;Parent=gene-NDY24_02980;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303138.1;locus_tag=NDY24_02980;product=PA2169 family four-helix-bundle protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 666680 667885 . - . ID=gene-NDY24_02985;Name=NDY24_02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02985 CP098602.1 Protein Homology CDS 666680 667885 . - 0 ID=cds-UUE98848.1;Parent=gene-NDY24_02985;Dbxref=NCBI_GP:UUE98848.1;Name=UUE98848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366048.1;locus_tag=NDY24_02985;product=MFS transporter;protein_id=UUE98848.1;transl_table=11 CP098602.1 Genbank gene 668107 669225 . + . ID=gene-NDY24_02990;Name=NDY24_02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02990 CP098602.1 Protein Homology CDS 668107 669225 . + 0 ID=cds-UUE98849.1;Parent=gene-NDY24_02990;Dbxref=NCBI_GP:UUE98849.1;Name=UUE98849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450490.1;locus_tag=NDY24_02990;product=alkene reductase;protein_id=UUE98849.1;transl_table=11 CP098602.1 Genbank gene 669631 670653 . + . ID=gene-NDY24_02995;Name=NDY24_02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_02995 CP098602.1 Protein Homology CDS 669631 670653 . + 0 ID=cds-UUE98850.1;Parent=gene-NDY24_02995;Dbxref=NCBI_GP:UUE98850.1;Name=UUE98850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904451.1;locus_tag=NDY24_02995;product=L%2CD-transpeptidase;protein_id=UUE98850.1;transl_table=11 CP098602.1 Genbank gene 670859 671650 . + . ID=gene-NDY24_03000;Name=NDY24_03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03000 CP098602.1 Protein Homology CDS 670859 671650 . + 0 ID=cds-UUE98851.1;Parent=gene-NDY24_03000;Dbxref=NCBI_GP:UUE98851.1;Name=UUE98851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904452.1;locus_tag=NDY24_03000;product=hypothetical protein;protein_id=UUE98851.1;transl_table=11 CP098602.1 Genbank gene 671768 672103 . - . ID=gene-NDY24_03005;Name=NDY24_03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03005 CP098602.1 Protein Homology CDS 671768 672103 . - 0 ID=cds-UUE98852.1;Parent=gene-NDY24_03005;Dbxref=NCBI_GP:UUE98852.1;Name=UUE98852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489493.1;locus_tag=NDY24_03005;product=zinc ribbon domain-containing protein YjdM;protein_id=UUE98852.1;transl_table=11 CP098602.1 Genbank gene 672201 673289 . + . ID=gene-NDY24_03010;Name=NDY24_03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03010 CP098602.1 Protein Homology CDS 672201 673289 . + 0 ID=cds-UUE98853.1;Parent=gene-NDY24_03010;Dbxref=NCBI_GP:UUE98853.1;Name=UUE98853.1;Ontology_term=GO:0006812,GO:0008324,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cation transmembrane transporter activity|0008324||IEA,efflux transmembrane transporter activity|0015562||IEA;go_process=cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974393.1;locus_tag=NDY24_03010;product=cation diffusion facilitator family transporter;protein_id=UUE98853.1;transl_table=11 CP098602.1 Genbank gene 673580 674053 . + . ID=gene-NDY24_03015;Name=NDY24_03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03015 CP098602.1 Protein Homology CDS 673580 674053 . + 0 ID=cds-UUE98854.1;Parent=gene-NDY24_03015;Dbxref=NCBI_GP:UUE98854.1;Name=UUE98854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008578221.1;locus_tag=NDY24_03015;product=peptidylprolyl isomerase;protein_id=UUE98854.1;transl_table=11 CP098602.1 Genbank gene 674177 675532 . + . ID=gene-NDY24_03020;Name=NDY24_03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03020 CP098602.1 Protein Homology CDS 674177 675532 . + 0 ID=cds-UUE98855.1;Parent=gene-NDY24_03020;Dbxref=NCBI_GP:UUE98855.1;Name=UUE98855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449531.1;locus_tag=NDY24_03020;product=Hsp70 family protein;protein_id=UUE98855.1;transl_table=11 CP098602.1 Genbank pseudogene 675765 675947 . + . ID=gene-NDY24_03025;Name=NDY24_03025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_03025;pseudo=true CP098602.1 Protein Homology CDS 675765 675947 . + 0 ID=cds-NDY24_03025;Parent=gene-NDY24_03025;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155632.1;locus_tag=NDY24_03025;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 676025 676909 . - . ID=gene-NDY24_03030;Name=NDY24_03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03030 CP098602.1 Protein Homology CDS 676025 676909 . - 0 ID=cds-UUE98856.1;Parent=gene-NDY24_03030;Dbxref=NCBI_GP:UUE98856.1;Name=UUE98856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507182.1;locus_tag=NDY24_03030;product=DUF4097 domain-containing protein;protein_id=UUE98856.1;transl_table=11 CP098602.1 Genbank gene 676921 677448 . - . ID=gene-NDY24_03035;Name=NDY24_03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03035 CP098602.1 Protein Homology CDS 676921 677448 . - 0 ID=cds-UUE98857.1;Parent=gene-NDY24_03035;Dbxref=NCBI_GP:UUE98857.1;Name=UUE98857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303190.1;locus_tag=NDY24_03035;product=hypothetical protein;protein_id=UUE98857.1;transl_table=11 CP098602.1 Genbank gene 677445 678032 . - . ID=gene-NDY24_03040;Name=NDY24_03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03040 CP098602.1 Protein Homology CDS 677445 678032 . - 0 ID=cds-UUE98858.1;Parent=gene-NDY24_03040;Dbxref=NCBI_GP:UUE98858.1;Name=UUE98858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036499.1;locus_tag=NDY24_03040;product=sigma-70 family RNA polymerase sigma factor;protein_id=UUE98858.1;transl_table=11 CP098602.1 Genbank gene 678220 678468 . + . ID=gene-NDY24_03045;Name=NDY24_03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03045 CP098602.1 Protein Homology CDS 678220 678468 . + 0 ID=cds-UUE98859.1;Parent=gene-NDY24_03045;Dbxref=NCBI_GP:UUE98859.1;Name=UUE98859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904105.1;locus_tag=NDY24_03045;product=hypothetical protein;protein_id=UUE98859.1;transl_table=11 CP098602.1 Genbank gene 678541 679134 . + . ID=gene-NDY24_03050;Name=NDY24_03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03050 CP098602.1 Protein Homology CDS 678541 679134 . + 0 ID=cds-UUE98860.1;Parent=gene-NDY24_03050;Dbxref=NCBI_GP:UUE98860.1;Name=UUE98860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005997098.1;locus_tag=NDY24_03050;product=mechanosensitive ion channel family protein;protein_id=UUE98860.1;transl_table=11 CP098602.1 Genbank gene 679151 679417 . - . ID=gene-NDY24_03055;Name=NDY24_03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03055 CP098602.1 Protein Homology CDS 679151 679417 . - 0 ID=cds-UUE98861.1;Parent=gene-NDY24_03055;Dbxref=NCBI_GP:UUE98861.1;Name=UUE98861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452846.1;locus_tag=NDY24_03055;product=DksA/TraR family C4-type zinc finger protein;protein_id=UUE98861.1;transl_table=11 CP098602.1 Genbank gene 679549 679803 . + . ID=gene-NDY24_03060;Name=NDY24_03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03060 CP098602.1 Protein Homology CDS 679549 679803 . + 0 ID=cds-UUE98862.1;Parent=gene-NDY24_03060;Dbxref=NCBI_GP:UUE98862.1;Name=UUE98862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005990927.1;locus_tag=NDY24_03060;product=DUF2789 domain-containing protein;protein_id=UUE98862.1;transl_table=11 CP098602.1 Genbank gene 680000 680173 . - . ID=gene-NDY24_03065;Name=NDY24_03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03065 CP098602.1 Protein Homology CDS 680000 680173 . - 0 ID=cds-UUE98863.1;Parent=gene-NDY24_03065;Dbxref=NCBI_GP:UUE98863.1;Name=UUE98863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019182774.1;locus_tag=NDY24_03065;product=DUF1328 domain-containing protein;protein_id=UUE98863.1;transl_table=11 CP098602.1 Genbank gene 680350 680877 . + . ID=gene-NDY24_03070;Name=NDY24_03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03070 CP098602.1 Protein Homology CDS 680350 680877 . + 0 ID=cds-UUE98864.1;Parent=gene-NDY24_03070;Dbxref=NCBI_GP:UUE98864.1;Name=UUE98864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113015.1;locus_tag=NDY24_03070;product=DUF45 domain-containing protein;protein_id=UUE98864.1;transl_table=11 CP098602.1 Genbank gene 680913 682181 . + . ID=gene-NDY24_03075;Name=NDY24_03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03075 CP098602.1 Protein Homology CDS 680913 682181 . + 0 ID=cds-UUE98865.1;Parent=gene-NDY24_03075;Dbxref=NCBI_GP:UUE98865.1;Name=UUE98865.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449856.1;locus_tag=NDY24_03075;product=2OG-Fe(II) oxygenase;protein_id=UUE98865.1;transl_table=11 CP098602.1 Genbank gene 682338 683438 . + . ID=gene-NDY24_03080;Name=NDY24_03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03080 CP098602.1 Protein Homology CDS 682338 683438 . + 0 ID=cds-UUE98866.1;Parent=gene-NDY24_03080;Dbxref=NCBI_GP:UUE98866.1;Name=UUE98866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155625.1;locus_tag=NDY24_03080;product=Glu/Leu/Phe/Val dehydrogenase;protein_id=UUE98866.1;transl_table=11 CP098602.1 Genbank gene 683482 686331 . - . ID=gene-NDY24_03085;Name=NDY24_03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03085 CP098602.1 Protein Homology CDS 683482 686331 . - 0 ID=cds-UUE98867.1;Parent=gene-NDY24_03085;Dbxref=NCBI_GP:UUE98867.1;Name=UUE98867.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911624.1;locus_tag=NDY24_03085;product=S8 family serine peptidase;protein_id=UUE98867.1;transl_table=11 CP098602.1 Genbank gene 686505 687680 . + . ID=gene-NDY24_03090;Name=NDY24_03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03090 CP098602.1 Protein Homology CDS 686505 687680 . + 0 ID=cds-UUE98868.1;Parent=gene-NDY24_03090;Dbxref=NCBI_GP:UUE98868.1;Name=UUE98868.1;Ontology_term=GO:0006631,GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911622.1;locus_tag=NDY24_03090;product=acetyl-CoA C-acyltransferase;protein_id=UUE98868.1;transl_table=11 CP098602.1 Genbank gene 687803 688144 . + . ID=gene-NDY24_03095;Name=NDY24_03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03095 CP098602.1 Protein Homology CDS 687803 688144 . + 0 ID=cds-UUF00259.1;Parent=gene-NDY24_03095;Dbxref=NCBI_GP:UUF00259.1;Name=UUF00259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269920.1;locus_tag=NDY24_03095;product=hypothetical protein;protein_id=UUF00259.1;transl_table=11 CP098602.1 Genbank gene 688402 688728 . + . ID=gene-NDY24_03100;Name=NDY24_03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03100 CP098602.1 Protein Homology CDS 688402 688728 . + 0 ID=cds-UUE98869.1;Parent=gene-NDY24_03100;Dbxref=NCBI_GP:UUE98869.1;Name=UUE98869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921547.1;locus_tag=NDY24_03100;product=hypothetical protein;protein_id=UUE98869.1;transl_table=11 CP098602.1 Genbank gene 688986 690695 . + . ID=gene-NDY24_03105;Name=NDY24_03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03105 CP098602.1 Protein Homology CDS 688986 690695 . + 0 ID=cds-UUE98870.1;Parent=gene-NDY24_03105;Dbxref=NCBI_GP:UUE98870.1;Name=UUE98870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166007.1;locus_tag=NDY24_03105;product=GGDEF domain-containing protein;protein_id=UUE98870.1;transl_table=11 CP098602.1 Genbank gene 690792 691367 . + . ID=gene-NDY24_03110;Name=NDY24_03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03110 CP098602.1 Protein Homology CDS 690792 691367 . + 0 ID=cds-UUF00260.1;Parent=gene-NDY24_03110;Dbxref=NCBI_GP:UUF00260.1;Name=UUF00260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967362.1;locus_tag=NDY24_03110;product=polymer-forming cytoskeletal protein;protein_id=UUF00260.1;transl_table=11 CP098602.1 Genbank gene 691364 691729 . + . ID=gene-NDY24_03115;Name=NDY24_03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03115 CP098602.1 Protein Homology CDS 691364 691729 . + 0 ID=cds-UUE98871.1;Parent=gene-NDY24_03115;Dbxref=NCBI_GP:UUE98871.1;Name=UUE98871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302272.1;locus_tag=NDY24_03115;product=hypothetical protein;protein_id=UUE98871.1;transl_table=11 CP098602.1 Genbank gene 692084 693094 . + . ID=gene-NDY24_03120;Name=NDY24_03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03120 CP098602.1 Protein Homology CDS 692084 693094 . + 0 ID=cds-UUE98872.1;Parent=gene-NDY24_03120;Dbxref=NCBI_GP:UUE98872.1;Name=UUE98872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089699.1;locus_tag=NDY24_03120;product=ligase-associated DNA damage response exonuclease;protein_id=UUE98872.1;transl_table=11 CP098602.1 Genbank gene 693091 693324 . + . ID=gene-NDY24_03125;Name=NDY24_03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03125 CP098602.1 Protein Homology CDS 693091 693324 . + 0 ID=cds-UUE98873.1;Parent=gene-NDY24_03125;Dbxref=NCBI_GP:UUE98873.1;Name=UUE98873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366000.1;locus_tag=NDY24_03125;product=hypothetical protein;protein_id=UUE98873.1;transl_table=11 CP098602.1 Genbank gene 693321 694925 . + . ID=gene-NDY24_03130;Name=NDY24_03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03130 CP098602.1 Protein Homology CDS 693321 694925 . + 0 ID=cds-UUE98874.1;Parent=gene-NDY24_03130;Dbxref=NCBI_GP:UUE98874.1;Name=UUE98874.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0003910,GO:0005524;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA ligase (ATP) activity|0003910||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300442.1;locus_tag=NDY24_03130;product=ATP-dependent DNA ligase;protein_id=UUE98874.1;transl_table=11 CP098602.1 Genbank gene 694922 697417 . + . ID=gene-NDY24_03135;Name=NDY24_03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03135 CP098602.1 Protein Homology CDS 694922 697417 . + 0 ID=cds-UUE98875.1;Parent=gene-NDY24_03135;Dbxref=NCBI_GP:UUE98875.1;Name=UUE98875.1;Ontology_term=GO:0003676,GO:0016818;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155617.1;locus_tag=NDY24_03135;product=ligase-associated DNA damage response DEXH box helicase;protein_id=UUE98875.1;transl_table=11 CP098602.1 Genbank gene 697407 698051 . + . ID=gene-NDY24_03140;Name=pdeM;gbkey=Gene;gene=pdeM;gene_biotype=protein_coding;locus_tag=NDY24_03140 CP098602.1 Protein Homology CDS 697407 698051 . + 0 ID=cds-UUE98876.1;Parent=gene-NDY24_03140;Dbxref=NCBI_GP:UUE98876.1;Name=UUE98876.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pdeM;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924783.1;locus_tag=NDY24_03140;product=ligase-associated DNA damage response endonuclease PdeM;protein_id=UUE98876.1;transl_table=11 CP098602.1 Genbank gene 698138 699433 . - . ID=gene-NDY24_03145;Name=NDY24_03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03145 CP098602.1 Protein Homology CDS 698138 699433 . - 0 ID=cds-UUE98877.1;Parent=gene-NDY24_03145;Dbxref=NCBI_GP:UUE98877.1;Name=UUE98877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903729.1;locus_tag=NDY24_03145;product=FAD-dependent monooxygenase;protein_id=UUE98877.1;transl_table=11 CP098602.1 Genbank gene 699530 699736 . - . ID=gene-NDY24_03150;Name=NDY24_03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03150 CP098602.1 Protein Homology CDS 699530 699736 . - 0 ID=cds-UUE98878.1;Parent=gene-NDY24_03150;Dbxref=NCBI_GP:UUE98878.1;Name=UUE98878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488188.1;locus_tag=NDY24_03150;product=cold-shock protein;protein_id=UUE98878.1;transl_table=11 CP098602.1 Genbank gene 699824 700576 . - . ID=gene-NDY24_03155;Name=NDY24_03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03155 CP098602.1 Protein Homology CDS 699824 700576 . - 0 ID=cds-UUE98879.1;Parent=gene-NDY24_03155;Dbxref=NCBI_GP:UUE98879.1;Name=UUE98879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408258.1;locus_tag=NDY24_03155;product=S-methyl-5'-thioinosine phosphorylase;protein_id=UUE98879.1;transl_table=11 CP098602.1 Genbank gene 700663 701217 . - . ID=gene-NDY24_03160;Name=NDY24_03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03160 CP098602.1 Protein Homology CDS 700663 701217 . - 0 ID=cds-UUE98880.1;Parent=gene-NDY24_03160;Dbxref=NCBI_GP:UUE98880.1;Name=UUE98880.1;Ontology_term=GO:0009116;gbkey=CDS;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449878.1;locus_tag=NDY24_03160;product=hypoxanthine-guanine phosphoribosyltransferase;protein_id=UUE98880.1;transl_table=11 CP098602.1 Genbank pseudogene 701220 702221 . - . ID=gene-NDY24_03165;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=pseudogene;locus_tag=NDY24_03165;pseudo=true CP098602.1 Protein Homology CDS 701220 702221 . - 0 ID=cds-NDY24_03165;Parent=gene-NDY24_03165;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303533.1;locus_tag=NDY24_03165;product=beta-N-acetylhexosaminidase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 702478 704043 . - . ID=gene-NDY24_03170;Name=NDY24_03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03170 CP098602.1 Protein Homology CDS 702478 704043 . - 0 ID=cds-UUE98881.1;Parent=gene-NDY24_03170;Dbxref=NCBI_GP:UUE98881.1;Name=UUE98881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449880.1;locus_tag=NDY24_03170;product=cryptochrome/photolyase family protein;protein_id=UUE98881.1;transl_table=11 CP098602.1 Genbank gene 704048 705058 . - . ID=gene-NDY24_03175;Name=NDY24_03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03175 CP098602.1 Protein Homology CDS 704048 705058 . - 0 ID=cds-UUE98882.1;Parent=gene-NDY24_03175;Dbxref=NCBI_GP:UUE98882.1;Name=UUE98882.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810371.1;locus_tag=NDY24_03175;product=FAD-dependent oxidoreductase;protein_id=UUE98882.1;transl_table=11 CP098602.1 Genbank gene 705098 705781 . - . ID=gene-NDY24_03180;Name=NDY24_03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03180 CP098602.1 Protein Homology CDS 705098 705781 . - 0 ID=cds-UUE98883.1;Parent=gene-NDY24_03180;Dbxref=NCBI_GP:UUE98883.1;Name=UUE98883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155610.1;locus_tag=NDY24_03180;product=DsbA family oxidoreductase;protein_id=UUE98883.1;transl_table=11 CP098602.1 Genbank gene 705896 706420 . - . ID=gene-NDY24_03185;Name=NDY24_03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03185 CP098602.1 Protein Homology CDS 705896 706420 . - 0 ID=cds-UUE98884.1;Parent=gene-NDY24_03185;Dbxref=NCBI_GP:UUE98884.1;Name=UUE98884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449883.1;locus_tag=NDY24_03185;product=CYTH domain-containing protein;protein_id=UUE98884.1;transl_table=11 CP098602.1 Genbank gene 706516 707163 . + . ID=gene-NDY24_03190;Name=NDY24_03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03190 CP098602.1 Protein Homology CDS 706516 707163 . + 0 ID=cds-UUE98885.1;Parent=gene-NDY24_03190;Dbxref=NCBI_GP:UUE98885.1;Name=UUE98885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449884.1;locus_tag=NDY24_03190;product=hypothetical protein;protein_id=UUE98885.1;transl_table=11 CP098602.1 Genbank gene 707234 708568 . - . ID=gene-NDY24_03195;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=NDY24_03195 CP098602.1 Protein Homology CDS 707234 708568 . - 0 ID=cds-UUE98886.1;Parent=gene-NDY24_03195;Dbxref=NCBI_GP:UUE98886.1;Name=UUE98886.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380519.1;locus_tag=NDY24_03195;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=UUE98886.1;transl_table=11 CP098602.1 Genbank gene 708726 709448 . + . ID=gene-NDY24_03200;Name=NDY24_03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03200 CP098602.1 Protein Homology CDS 708726 709448 . + 0 ID=cds-UUE98887.1;Parent=gene-NDY24_03200;Dbxref=NCBI_GP:UUE98887.1;Name=UUE98887.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258605.1;locus_tag=NDY24_03200;product=response regulator;protein_id=UUE98887.1;transl_table=11 CP098602.1 Genbank pseudogene 709601 710324 . - . ID=gene-NDY24_03205;Name=recO;gbkey=Gene;gene=recO;gene_biotype=pseudogene;locus_tag=NDY24_03205;pseudo=true CP098602.1 Protein Homology CDS 709601 710324 . - 0 ID=cds-NDY24_03205;Parent=gene-NDY24_03205;Note=frameshifted;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300430.1;locus_tag=NDY24_03205;product=DNA repair protein RecO;pseudo=true;transl_table=11 CP098602.1 Genbank gene 710352 711251 . - . ID=gene-NDY24_03210;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=NDY24_03210 CP098602.1 Protein Homology CDS 710352 711251 . - 0 ID=cds-UUE98888.1;Parent=gene-NDY24_03210;Dbxref=NCBI_GP:UUE98888.1;Name=UUE98888.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921522.1;locus_tag=NDY24_03210;product=GTPase Era;protein_id=UUE98888.1;transl_table=11 CP098602.1 Genbank gene 711248 711928 . - . ID=gene-NDY24_03215;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=NDY24_03215 CP098602.1 Protein Homology CDS 711248 711928 . - 0 ID=cds-UUE98889.1;Parent=gene-NDY24_03215;Dbxref=NCBI_GP:UUE98889.1;Name=UUE98889.1;Ontology_term=GO:0006396,GO:0004525;gbkey=CDS;gene=rnc;go_function=ribonuclease III activity|0004525||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118163.1;locus_tag=NDY24_03215;product=ribonuclease III;protein_id=UUE98889.1;transl_table=11 CP098602.1 Genbank gene 711918 712325 . - . ID=gene-NDY24_03220;Name=NDY24_03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03220 CP098602.1 Protein Homology CDS 711918 712325 . - 0 ID=cds-UUE98890.1;Parent=gene-NDY24_03220;Dbxref=NCBI_GP:UUE98890.1;Name=UUE98890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050845.1;locus_tag=NDY24_03220;product=DUF4845 domain-containing protein;protein_id=UUE98890.1;transl_table=11 CP098602.1 Genbank gene 712326 713126 . - . ID=gene-NDY24_03225;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=NDY24_03225 CP098602.1 Protein Homology CDS 712326 713126 . - 0 ID=cds-UUE98891.1;Parent=gene-NDY24_03225;Dbxref=NCBI_GP:UUE98891.1;Name=UUE98891.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155604.1;locus_tag=NDY24_03225;product=signal peptidase I;protein_id=UUE98891.1;transl_table=11 CP098602.1 Genbank gene 713231 715021 . - . ID=gene-NDY24_03230;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=NDY24_03230 CP098602.1 Protein Homology CDS 713231 715021 . - 0 ID=cds-UUF00261.1;Parent=gene-NDY24_03230;Dbxref=NCBI_GP:UUF00261.1;Name=UUF00261.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300425.1;locus_tag=NDY24_03230;product=translation elongation factor 4;protein_id=UUF00261.1;transl_table=11 CP098602.1 Genbank gene 715209 716795 . - . ID=gene-NDY24_03235;Name=NDY24_03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03235 CP098602.1 Protein Homology CDS 715209 716795 . - 0 ID=cds-UUE98892.1;Parent=gene-NDY24_03235;Dbxref=NCBI_GP:UUE98892.1;Name=UUE98892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160027.1;locus_tag=NDY24_03235;product=DegQ family serine endoprotease;protein_id=UUE98892.1;transl_table=11 CP098602.1 Genbank gene 716906 717787 . - . ID=gene-NDY24_03240;Name=NDY24_03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03240 CP098602.1 Protein Homology CDS 716906 717787 . - 0 ID=cds-UUE98893.1;Parent=gene-NDY24_03240;Dbxref=NCBI_GP:UUE98893.1;Name=UUE98893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159519.1;locus_tag=NDY24_03240;product=sigma-E factor negative regulatory protein;protein_id=UUE98893.1;transl_table=11 CP098602.1 Genbank gene 717784 718404 . - . ID=gene-NDY24_03245;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=NDY24_03245 CP098602.1 Protein Homology CDS 717784 718404 . - 0 ID=cds-UUF00262.1;Parent=gene-NDY24_03245;Dbxref=NCBI_GP:UUF00262.1;Name=UUF00262.1;Ontology_term=GO:0006352,GO:0006979,GO:0016987,GO:0005737;gbkey=CDS;gene=rpoE;go_component=cytoplasm|0005737||IEA;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription%2C initiation|0006352||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007962205.1;locus_tag=NDY24_03245;product=RNA polymerase sigma factor RpoE;protein_id=UUF00262.1;transl_table=11 CP098602.1 Genbank gene 718640 720721 . + . ID=gene-NDY24_03250;Name=NDY24_03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03250 CP098602.1 Protein Homology CDS 718640 720721 . + 0 ID=cds-UUE98894.1;Parent=gene-NDY24_03250;Dbxref=NCBI_GP:UUE98894.1;Name=UUE98894.1;Ontology_term=GO:0006631,GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005931134.1;locus_tag=NDY24_03250;product=3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein;protein_id=UUE98894.1;transl_table=11 CP098602.1 Genbank gene 720892 723744 . - . ID=gene-NDY24_03255;Name=NDY24_03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03255 CP098602.1 Protein Homology CDS 720892 723744 . - 0 ID=cds-UUE98895.1;Parent=gene-NDY24_03255;Dbxref=NCBI_GP:UUE98895.1;Name=UUE98895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161181.1;locus_tag=NDY24_03255;product=TonB-dependent receptor;protein_id=UUE98895.1;transl_table=11 CP098602.1 Genbank gene 724145 725716 . - . ID=gene-NDY24_03260;Name=NDY24_03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03260 CP098602.1 Protein Homology CDS 724145 725716 . - 0 ID=cds-UUE98896.1;Parent=gene-NDY24_03260;Dbxref=NCBI_GP:UUE98896.1;Name=UUE98896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167063.1;locus_tag=NDY24_03260;product=sulfotransferase;protein_id=UUE98896.1;transl_table=11 CP098602.1 Genbank pseudogene 725757 726164 . - . ID=gene-NDY24_03265;Name=NDY24_03265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_03265;pseudo=true CP098602.1 Protein Homology CDS 725757 726164 . - 0 ID=cds-NDY24_03265;Parent=gene-NDY24_03265;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155596.1;locus_tag=NDY24_03265;product=type VI secretion protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 726373 727875 . + . ID=gene-NDY24_03270;Name=NDY24_03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03270 CP098602.1 Protein Homology CDS 726373 727875 . + 0 ID=cds-UUE98897.1;Parent=gene-NDY24_03270;Dbxref=NCBI_GP:UUE98897.1;Name=UUE98897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155595.1;locus_tag=NDY24_03270;product=sulfotransferase;protein_id=UUE98897.1;transl_table=11 CP098602.1 Genbank gene 727888 729171 . - . ID=gene-NDY24_03275;Name=NDY24_03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03275 CP098602.1 Protein Homology CDS 727888 729171 . - 0 ID=cds-UUE98898.1;Parent=gene-NDY24_03275;Dbxref=NCBI_GP:UUE98898.1;Name=UUE98898.1;Ontology_term=GO:0018193;gbkey=CDS;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155594.1;locus_tag=NDY24_03275;product=aspartyl/asparaginyl beta-hydroxylase domain-containing protein;protein_id=UUE98898.1;transl_table=11 CP098602.1 Genbank gene 729341 730306 . - . ID=gene-NDY24_03280;Name=NDY24_03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03280 CP098602.1 Protein Homology CDS 729341 730306 . - 0 ID=cds-UUE98899.1;Parent=gene-NDY24_03280;Dbxref=NCBI_GP:UUE98899.1;Name=UUE98899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449900.1;locus_tag=NDY24_03280;product=cation diffusion facilitator family transporter;protein_id=UUE98899.1;transl_table=11 CP098602.1 Genbank gene 731105 732007 . - . ID=gene-NDY24_03285;Name=mmsB;gbkey=Gene;gene=mmsB;gene_biotype=protein_coding;locus_tag=NDY24_03285 CP098602.1 Protein Homology CDS 731105 732007 . - 0 ID=cds-UUF00263.1;Parent=gene-NDY24_03285;Dbxref=NCBI_GP:UUF00263.1;Name=UUF00263.1;Ontology_term=GO:0006574,GO:0008442;gbkey=CDS;gene=mmsB;go_function=3-hydroxyisobutyrate dehydrogenase activity|0008442||IEA;go_process=valine catabolic process|0006574||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118158.1;locus_tag=NDY24_03285;product=3-hydroxyisobutyrate dehydrogenase;protein_id=UUF00263.1;transl_table=11 CP098602.1 Genbank gene 732164 733366 . - . ID=gene-NDY24_03290;Name=NDY24_03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03290 CP098602.1 Protein Homology CDS 732164 733366 . - 0 ID=cds-UUE98900.1;Parent=gene-NDY24_03290;Dbxref=NCBI_GP:UUE98900.1;Name=UUE98900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155591.1;locus_tag=NDY24_03290;product=enoyl-CoA hydratase/isomerase family protein;protein_id=UUE98900.1;transl_table=11 CP098602.1 Genbank gene 733351 734148 . - . ID=gene-NDY24_03295;Name=NDY24_03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03295 CP098602.1 Protein Homology CDS 733351 734148 . - 0 ID=cds-UUE98901.1;Parent=gene-NDY24_03295;Dbxref=NCBI_GP:UUE98901.1;Name=UUE98901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903185.1;locus_tag=NDY24_03295;product=enoyl-CoA hydratase;protein_id=UUE98901.1;transl_table=11 CP098602.1 Genbank pseudogene 734145 735325 . - . ID=gene-NDY24_03300;Name=NDY24_03300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_03300;pseudo=true CP098602.1 Protein Homology CDS 734145 735325 . - 0 ID=cds-NDY24_03300;Parent=gene-NDY24_03300;Note=frameshifted;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303549.1;locus_tag=NDY24_03300;product=acyl-CoA dehydrogenase family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 735336 736841 . - . ID=gene-NDY24_03305;Name=NDY24_03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03305 CP098602.1 Protein Homology CDS 735336 736841 . - 0 ID=cds-UUE98902.1;Parent=gene-NDY24_03305;Dbxref=NCBI_GP:UUE98902.1;Name=UUE98902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155588.1;locus_tag=NDY24_03305;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=UUE98902.1;transl_table=11 CP098602.1 Genbank gene 736966 738351 . + . ID=gene-NDY24_03310;Name=NDY24_03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03310 CP098602.1 Protein Homology CDS 736966 738351 . + 0 ID=cds-UUE98903.1;Parent=gene-NDY24_03310;Dbxref=NCBI_GP:UUE98903.1;Name=UUE98903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911544.1;locus_tag=NDY24_03310;product=short-chain fatty acyl-CoA regulator family protein;protein_id=UUE98903.1;transl_table=11 CP098602.1 Genbank gene 738727 741414 . + . ID=gene-NDY24_03315;Name=NDY24_03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03315 CP098602.1 Protein Homology CDS 738727 741414 . + 0 ID=cds-UUE98904.1;Parent=gene-NDY24_03315;Dbxref=NCBI_GP:UUE98904.1;Name=UUE98904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488248.1;locus_tag=NDY24_03315;product=TonB-dependent receptor;protein_id=UUE98904.1;transl_table=11 CP098602.1 Genbank gene 741574 742785 . + . ID=gene-NDY24_03320;Name=NDY24_03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03320 CP098602.1 Protein Homology CDS 741574 742785 . + 0 ID=cds-UUE98905.1;Parent=gene-NDY24_03320;Dbxref=NCBI_GP:UUE98905.1;Name=UUE98905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036451.1;locus_tag=NDY24_03320;product=arabinogalactan endo-1%2C4-beta-galactosidase;protein_id=UUE98905.1;transl_table=11 CP098602.1 Genbank gene 742782 745349 . + . ID=gene-NDY24_03325;Name=NDY24_03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03325 CP098602.1 Protein Homology CDS 742782 745349 . + 0 ID=cds-UUE98906.1;Parent=gene-NDY24_03325;Dbxref=NCBI_GP:UUE98906.1;Name=UUE98906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118153.1;locus_tag=NDY24_03325;product=DUF4982 domain-containing protein;protein_id=UUE98906.1;transl_table=11 CP098602.1 Genbank pseudogene 745609 747536 . - . ID=gene-NDY24_03330;Name=NDY24_03330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_03330;pseudo=true CP098602.1 Protein Homology CDS 745609 747536 . - 0 ID=cds-NDY24_03330;Parent=gene-NDY24_03330;Note=frameshifted;Ontology_term=GO:0005975,GO:0004560;gbkey=CDS;go_function=alpha-L-fucosidase activity|0004560||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449168.1;locus_tag=NDY24_03330;product=alpha-L-fucosidase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 747862 748986 . - . ID=gene-NDY24_03335;Name=NDY24_03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03335 CP098602.1 Protein Homology CDS 747862 748986 . - 0 ID=cds-UUE98907.1;Parent=gene-NDY24_03335;Dbxref=NCBI_GP:UUE98907.1;Name=UUE98907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036410.1;locus_tag=NDY24_03335;product=pyridoxal phosphate-dependent aminotransferase;protein_id=UUE98907.1;transl_table=11 CP098602.1 Genbank gene 749071 749712 . - . ID=gene-NDY24_03340;Name=NDY24_03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03340 CP098602.1 Protein Homology CDS 749071 749712 . - 0 ID=cds-UUE98908.1;Parent=gene-NDY24_03340;Dbxref=NCBI_GP:UUE98908.1;Name=UUE98908.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024950.2;locus_tag=NDY24_03340;product=SDR family oxidoreductase;protein_id=UUE98908.1;transl_table=11 CP098602.1 Genbank gene 749785 751041 . - . ID=gene-NDY24_03345;Name=NDY24_03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03345 CP098602.1 Protein Homology CDS 749785 751041 . - 0 ID=cds-UUE98909.1;Parent=gene-NDY24_03345;Dbxref=NCBI_GP:UUE98909.1;Name=UUE98909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507087.1;locus_tag=NDY24_03345;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=UUE98909.1;transl_table=11 CP098602.1 Genbank gene 751068 751289 . - . ID=gene-NDY24_03350;Name=NDY24_03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03350 CP098602.1 GeneMarkS-2+ CDS 751068 751289 . - 0 ID=cds-UUE98910.1;Parent=gene-NDY24_03350;Dbxref=NCBI_GP:UUE98910.1;Name=UUE98910.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_03350;product=hypothetical protein;protein_id=UUE98910.1;transl_table=11 CP098602.1 Genbank gene 752609 752959 . - . ID=gene-NDY24_03355;Name=NDY24_03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03355 CP098602.1 Protein Homology CDS 752609 752959 . - 0 ID=cds-UUE98911.1;Parent=gene-NDY24_03355;Dbxref=NCBI_GP:UUE98911.1;Name=UUE98911.1;Ontology_term=GO:0019441,GO:0004833,GO:0020037;gbkey=CDS;go_function=tryptophan 2%2C3-dioxygenase activity|0004833||IEA,heme binding|0020037||IEA;go_process=tryptophan catabolic process to kynurenine|0019441||IEA;inference=COORDINATES: protein motif:HMM:NF015272.2;locus_tag=NDY24_03355;product=tryptophan 2%2C3-dioxygenase family protein;protein_id=UUE98911.1;transl_table=11 CP098602.1 Genbank gene 752895 753170 . - . ID=gene-NDY24_03360;Name=NDY24_03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03360 CP098602.1 GeneMarkS-2+ CDS 752895 753170 . - 0 ID=cds-UUE98912.1;Parent=gene-NDY24_03360;Dbxref=NCBI_GP:UUE98912.1;Name=UUE98912.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_03360;product=hypothetical protein;protein_id=UUE98912.1;transl_table=11 CP098602.1 Genbank gene 753177 753719 . - . ID=gene-NDY24_03365;Name=NDY24_03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03365 CP098602.1 Protein Homology CDS 753177 753719 . - 0 ID=cds-UUE98913.1;Parent=gene-NDY24_03365;Dbxref=NCBI_GP:UUE98913.1;Name=UUE98913.1;Ontology_term=GO:0019441,GO:0004833,GO:0020037;gbkey=CDS;go_function=tryptophan 2%2C3-dioxygenase activity|0004833||IEA,heme binding|0020037||IEA;go_process=tryptophan catabolic process to kynurenine|0019441||IEA;inference=COORDINATES: protein motif:HMM:NF015272.2;locus_tag=NDY24_03365;product=tryptophan 2%2C3-dioxygenase family protein;protein_id=UUE98913.1;transl_table=11 CP098602.1 Genbank gene 753791 754321 . - . ID=gene-NDY24_03370;Name=NDY24_03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03370 CP098602.1 Protein Homology CDS 753791 754321 . - 0 ID=cds-UUE98914.1;Parent=gene-NDY24_03370;Dbxref=NCBI_GP:UUE98914.1;Name=UUE98914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036405.1;locus_tag=NDY24_03370;product=VOC family protein;protein_id=UUE98914.1;transl_table=11 CP098602.1 Genbank gene 755514 758135 . + . ID=gene-NDY24_03375;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=NDY24_03375 CP098602.1 Protein Homology CDS 755514 758135 . + 0 ID=cds-UUE98915.1;Parent=gene-NDY24_03375;Dbxref=NCBI_GP:UUE98915.1;Name=UUE98915.1;Ontology_term=GO:0006298,GO:0005524;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089665.1;locus_tag=NDY24_03375;product=DNA mismatch repair protein MutS;protein_id=UUE98915.1;transl_table=11 CP098602.1 Genbank gene 758456 759070 . + . ID=gene-NDY24_03380;Name=NDY24_03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03380 CP098602.1 Protein Homology CDS 758456 759070 . + 0 ID=cds-UUE98916.1;Parent=gene-NDY24_03380;Dbxref=NCBI_GP:UUE98916.1;Name=UUE98916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571130.1;locus_tag=NDY24_03380;product=DUF937 domain-containing protein;protein_id=UUE98916.1;transl_table=11 CP098602.1 Genbank gene 759443 761689 . + . ID=gene-NDY24_03385;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=NDY24_03385 CP098602.1 Protein Homology CDS 759443 761689 . + 0 ID=cds-UUE98917.1;Parent=gene-NDY24_03385;Dbxref=NCBI_GP:UUE98917.1;Name=UUE98917.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507078.1;locus_tag=NDY24_03385;product=catalase/peroxidase HPI;protein_id=UUE98917.1;transl_table=11 CP098602.1 Genbank gene 761995 762402 . - . ID=gene-NDY24_03390;Name=NDY24_03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03390 CP098602.1 Protein Homology CDS 761995 762402 . - 0 ID=cds-UUE98918.1;Parent=gene-NDY24_03390;Dbxref=NCBI_GP:UUE98918.1;Name=UUE98918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571127.1;locus_tag=NDY24_03390;product=RNA-binding S4 domain-containing protein;protein_id=UUE98918.1;transl_table=11 CP098602.1 Genbank gene 762723 764198 . + . ID=gene-NDY24_03395;Name=NDY24_03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03395 CP098602.1 Protein Homology CDS 762723 764198 . + 0 ID=cds-UUE98919.1;Parent=gene-NDY24_03395;Dbxref=NCBI_GP:UUE98919.1;Name=UUE98919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449160.1;locus_tag=NDY24_03395;product=MATE family efflux transporter;protein_id=UUE98919.1;transl_table=11 CP098602.1 Genbank gene 764360 764767 . - . ID=gene-NDY24_03400;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=NDY24_03400 CP098602.1 Protein Homology CDS 764360 764767 . - 0 ID=cds-UUF00264.1;Parent=gene-NDY24_03400;Dbxref=NCBI_GP:UUF00264.1;Name=UUF00264.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003470862.1;locus_tag=NDY24_03400;product=50S ribosomal protein L19;protein_id=UUF00264.1;transl_table=11 CP098602.1 Genbank gene 764915 765685 . - . ID=gene-NDY24_03405;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=NDY24_03405 CP098602.1 Protein Homology CDS 764915 765685 . - 0 ID=cds-UUE98920.1;Parent=gene-NDY24_03405;Dbxref=NCBI_GP:UUE98920.1;Name=UUE98920.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N(1))-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449158.1;locus_tag=NDY24_03405;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=UUE98920.1;transl_table=11 CP098602.1 Genbank gene 765765 766277 . - . ID=gene-NDY24_03410;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=NDY24_03410 CP098602.1 Protein Homology CDS 765765 766277 . - 0 ID=cds-UUE98921.1;Parent=gene-NDY24_03410;Dbxref=NCBI_GP:UUE98921.1;Name=UUE98921.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0003723;gbkey=CDS;gene=rimM;go_function=RNA binding|0003723||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407909.1;locus_tag=NDY24_03410;product=ribosome maturation factor RimM;protein_id=UUE98921.1;transl_table=11 CP098602.1 Genbank gene 766319 766579 . - . ID=gene-NDY24_03415;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=NDY24_03415 CP098602.1 Protein Homology CDS 766319 766579 . - 0 ID=cds-UUE98922.1;Parent=gene-NDY24_03415;Dbxref=NCBI_GP:UUE98922.1;Name=UUE98922.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036396.1;locus_tag=NDY24_03415;product=30S ribosomal protein S16;protein_id=UUE98922.1;transl_table=11 CP098602.1 Genbank gene 766690 767487 . - . ID=gene-NDY24_03420;Name=NDY24_03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03420 CP098602.1 Protein Homology CDS 766690 767487 . - 0 ID=cds-UUE98923.1;Parent=gene-NDY24_03420;Dbxref=NCBI_GP:UUE98923.1;Name=UUE98923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159695.1;locus_tag=NDY24_03420;product=aminotransferase class IV family protein;protein_id=UUE98923.1;transl_table=11 CP098602.1 Genbank gene 767478 768476 . - . ID=gene-NDY24_03425;Name=NDY24_03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03425 CP098602.1 Protein Homology CDS 767478 768476 . - 0 ID=cds-UUE98924.1;Parent=gene-NDY24_03425;Dbxref=NCBI_GP:UUE98924.1;Name=UUE98924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089656.1;locus_tag=NDY24_03425;product=nitronate monooxygenase;protein_id=UUE98924.1;transl_table=11 CP098602.1 Genbank gene 768577 769407 . - . ID=gene-NDY24_03430;Name=NDY24_03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03430 CP098602.1 Protein Homology CDS 768577 769407 . - 0 ID=cds-UUE98925.1;Parent=gene-NDY24_03430;Dbxref=NCBI_GP:UUE98925.1;Name=UUE98925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507069.1;locus_tag=NDY24_03430;product=DUF2314 domain-containing protein;protein_id=UUE98925.1;transl_table=11 CP098602.1 Genbank pseudogene 769915 770839 . + . ID=gene-NDY24_03435;Name=NDY24_03435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_03435;pseudo=true CP098602.1 Protein Homology CDS 769915 770839 . + 0 ID=cds-NDY24_03435;Parent=gene-NDY24_03435;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012509957.1;locus_tag=NDY24_03435;product=IS110 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 771147 772523 . - . ID=gene-NDY24_03440;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=NDY24_03440 CP098602.1 Protein Homology CDS 771147 772523 . - 0 ID=cds-UUE98926.1;Parent=gene-NDY24_03440;Dbxref=NCBI_GP:UUE98926.1;Name=UUE98926.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407905.1;locus_tag=NDY24_03440;product=signal recognition particle protein;protein_id=UUE98926.1;transl_table=11 CP098602.1 Genbank gene 772716 773507 . + . ID=gene-NDY24_03445;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=NDY24_03445 CP098602.1 Protein Homology CDS 772716 773507 . + 0 ID=cds-UUE98927.1;Parent=gene-NDY24_03445;Dbxref=NCBI_GP:UUE98927.1;Name=UUE98927.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484236.1;locus_tag=NDY24_03445;product=cytochrome c biogenesis protein CcsA;protein_id=UUE98927.1;transl_table=11 CP098602.1 Genbank gene 773560 774615 . - . ID=gene-NDY24_03450;Name=NDY24_03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03450 CP098602.1 Protein Homology CDS 773560 774615 . - 0 ID=cds-UUE98928.1;Parent=gene-NDY24_03450;Dbxref=NCBI_GP:UUE98928.1;Name=UUE98928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005932146.1;locus_tag=NDY24_03450;product=galactose mutarotase;protein_id=UUE98928.1;transl_table=11 CP098602.1 Genbank pseudogene 774894 776464 . + . ID=gene-NDY24_03455;Name=NDY24_03455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_03455;pseudo=true CP098602.1 Protein Homology CDS 774894 776464 . + 0 ID=cds-NDY24_03455;Parent=gene-NDY24_03455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304880.1;locus_tag=NDY24_03455;product=alpha-N-arabinofuranosidase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 776720 777690 . - . ID=gene-NDY24_03460;Name=NDY24_03460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_03460;pseudo=true CP098602.1 Protein Homology CDS 776720 777690 . - 0 ID=cds-NDY24_03460;Parent=gene-NDY24_03460;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450605.1;locus_tag=NDY24_03460;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 CP098602.1 Genbank gene 777827 778102 . + . ID=gene-NDY24_03465;Name=NDY24_03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03465 CP098602.1 Protein Homology CDS 777827 778102 . + 0 ID=cds-UUE98929.1;Parent=gene-NDY24_03465;Dbxref=NCBI_GP:UUE98929.1;Name=UUE98929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036386.1;locus_tag=NDY24_03465;product=DUF2798 domain-containing protein;protein_id=UUE98929.1;transl_table=11 CP098602.1 Genbank gene 778317 779666 . + . ID=gene-NDY24_03470;Name=NDY24_03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03470 CP098602.1 Protein Homology CDS 778317 779666 . + 0 ID=cds-UUE98930.1;Parent=gene-NDY24_03470;Dbxref=NCBI_GP:UUE98930.1;Name=UUE98930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472390.1;locus_tag=NDY24_03470;product=glycoside hydrolase family 16 protein;protein_id=UUE98930.1;transl_table=11 CP098602.1 Genbank gene 779698 780066 . - . ID=gene-NDY24_03475;Name=NDY24_03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03475 CP098602.1 Protein Homology CDS 779698 780066 . - 0 ID=cds-UUE98931.1;Parent=gene-NDY24_03475;Dbxref=NCBI_GP:UUE98931.1;Name=UUE98931.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159693.1;locus_tag=NDY24_03475;product=response regulator;protein_id=UUE98931.1;transl_table=11 CP098602.1 Genbank pseudogene 780059 781218 . - . ID=gene-NDY24_03480;Name=NDY24_03480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_03480;pseudo=true CP098602.1 Protein Homology CDS 780059 781218 . - 0 ID=cds-NDY24_03480;Parent=gene-NDY24_03480;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005923566.1;locus_tag=NDY24_03480;product=ATP-binding protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 781378 784542 . + . ID=gene-NDY24_03485;Name=NDY24_03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03485 CP098602.1 Protein Homology CDS 781378 784542 . + 0 ID=cds-UUE98932.1;Parent=gene-NDY24_03485;Dbxref=NCBI_GP:UUE98932.1;Name=UUE98932.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005923564.1;locus_tag=NDY24_03485;product=response regulator;protein_id=UUE98932.1;transl_table=11 CP098602.1 Genbank gene 784515 785363 . + . ID=gene-NDY24_03490;Name=NDY24_03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03490 CP098602.1 Protein Homology CDS 784515 785363 . + 0 ID=cds-UUE98933.1;Parent=gene-NDY24_03490;Dbxref=NCBI_GP:UUE98933.1;Name=UUE98933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113037.1;locus_tag=NDY24_03490;product=protein-glutamate O-methyltransferase CheR;protein_id=UUE98933.1;transl_table=11 CP098602.1 Genbank gene 785360 785944 . + . ID=gene-NDY24_03495;Name=NDY24_03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03495 CP098602.1 Protein Homology CDS 785360 785944 . + 0 ID=cds-UUE98934.1;Parent=gene-NDY24_03495;Dbxref=NCBI_GP:UUE98934.1;Name=UUE98934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019184160.1;locus_tag=NDY24_03495;product=chemotaxis protein CheB;protein_id=UUE98934.1;transl_table=11 CP098602.1 Genbank gene 785941 787071 . + . ID=gene-NDY24_03500;Name=NDY24_03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03500 CP098602.1 Protein Homology CDS 785941 787071 . + 0 ID=cds-UUE98935.1;Parent=gene-NDY24_03500;Dbxref=NCBI_GP:UUE98935.1;Name=UUE98935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484256.1;locus_tag=NDY24_03500;product=hybrid sensor histidine kinase/response regulator;protein_id=UUE98935.1;transl_table=11 CP098602.1 Genbank gene 787446 787805 . + . ID=gene-NDY24_03505;Name=NDY24_03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03505 CP098602.1 Protein Homology CDS 787446 787805 . + 0 ID=cds-UUE98936.1;Parent=gene-NDY24_03505;Dbxref=NCBI_GP:UUE98936.1;Name=UUE98936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365870.1;locus_tag=NDY24_03505;product=DUF1428 domain-containing protein;protein_id=UUE98936.1;transl_table=11 CP098602.1 Genbank gene 787959 788102 . - . ID=gene-NDY24_03510;Name=NDY24_03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03510 CP098602.1 GeneMarkS-2+ CDS 787959 788102 . - 0 ID=cds-UUE98937.1;Parent=gene-NDY24_03510;Dbxref=NCBI_GP:UUE98937.1;Name=UUE98937.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_03510;product=hypothetical protein;protein_id=UUE98937.1;transl_table=11 CP098602.1 Genbank gene 788099 789478 . - . ID=gene-NDY24_03515;Name=NDY24_03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03515 CP098602.1 Protein Homology CDS 788099 789478 . - 0 ID=cds-UUE98938.1;Parent=gene-NDY24_03515;Dbxref=NCBI_GP:UUE98938.1;Name=UUE98938.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017142.2;locus_tag=NDY24_03515;product=hypothetical protein;protein_id=UUE98938.1;transl_table=11 CP098602.1 Genbank pseudogene 790141 790577 . + . ID=gene-NDY24_03520;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=pseudogene;locus_tag=NDY24_03520;pseudo=true CP098602.1 Protein Homology CDS 790141 790577 . + 0 ID=cds-NDY24_03520;Parent=gene-NDY24_03520;Note=frameshifted;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050813.1;locus_tag=NDY24_03520;product=thioredoxin TrxC;pseudo=true;transl_table=11 CP098602.1 Genbank gene 790696 793065 . - . ID=gene-NDY24_03525;Name=NDY24_03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03525 CP098602.1 Protein Homology CDS 790696 793065 . - 0 ID=cds-UUE98939.1;Parent=gene-NDY24_03525;Dbxref=NCBI_GP:UUE98939.1;Name=UUE98939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157997.1;locus_tag=NDY24_03525;product=TonB-dependent receptor;protein_id=UUE98939.1;transl_table=11 CP098602.1 Genbank gene 793147 793222 . + . ID=gene-NDY24_03530;Name=NDY24_03530;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_03530 CP098602.1 cmsearch ncRNA 793147 793222 . + . ID=rna-NDY24_03530;Parent=gene-NDY24_03530;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_03530;product=sX9 sRNA CP098602.1 cmsearch exon 793147 793222 . + . ID=exon-NDY24_03530-1;Parent=rna-NDY24_03530;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_03530;product=sX9 sRNA CP098602.1 Genbank gene 793555 795513 . - . ID=gene-NDY24_03535;Name=NDY24_03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03535 CP098602.1 Protein Homology CDS 793555 795513 . - 0 ID=cds-UUE98940.1;Parent=gene-NDY24_03535;Dbxref=NCBI_GP:UUE98940.1;Name=UUE98940.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967494.1;locus_tag=NDY24_03535;product=response regulator;protein_id=UUE98940.1;transl_table=11 CP098602.1 Genbank gene 795503 796378 . - . ID=gene-NDY24_03540;Name=NDY24_03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03540 CP098602.1 Protein Homology CDS 795503 796378 . - 0 ID=cds-UUE98941.1;Parent=gene-NDY24_03540;Dbxref=NCBI_GP:UUE98941.1;Name=UUE98941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901510.1;locus_tag=NDY24_03540;product=ATP-binding protein;protein_id=UUE98941.1;transl_table=11 CP098602.1 Genbank gene 796375 797385 . - . ID=gene-NDY24_03545;Name=NDY24_03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03545 CP098602.1 Protein Homology CDS 796375 797385 . - 0 ID=cds-UUE98942.1;Parent=gene-NDY24_03545;Dbxref=NCBI_GP:UUE98942.1;Name=UUE98942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005928771.1;locus_tag=NDY24_03545;product=ATP-binding protein;protein_id=UUE98942.1;transl_table=11 CP098602.1 Genbank gene 797376 797771 . - . ID=gene-NDY24_03550;Name=NDY24_03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03550 CP098602.1 Protein Homology CDS 797376 797771 . - 0 ID=cds-UUE98943.1;Parent=gene-NDY24_03550;Dbxref=NCBI_GP:UUE98943.1;Name=UUE98943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484271.1;locus_tag=NDY24_03550;product=anti-sigma regulatory factor;protein_id=UUE98943.1;transl_table=11 CP098602.1 Genbank gene 797768 798130 . - . ID=gene-NDY24_03555;Name=NDY24_03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03555 CP098602.1 Protein Homology CDS 797768 798130 . - 0 ID=cds-UUE98944.1;Parent=gene-NDY24_03555;Dbxref=NCBI_GP:UUE98944.1;Name=UUE98944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365855.1;locus_tag=NDY24_03555;product=STAS domain-containing protein;protein_id=UUE98944.1;transl_table=11 CP098602.1 Genbank gene 798132 798974 . - . ID=gene-NDY24_03560;Name=NDY24_03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03560 CP098602.1 Protein Homology CDS 798132 798974 . - 0 ID=cds-UUE98945.1;Parent=gene-NDY24_03560;Dbxref=NCBI_GP:UUE98945.1;Name=UUE98945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117497.1;locus_tag=NDY24_03560;product=STAS domain-containing protein;protein_id=UUE98945.1;transl_table=11 CP098602.1 Genbank gene 799411 800511 . + . ID=gene-NDY24_03565;Name=NDY24_03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03565 CP098602.1 Protein Homology CDS 799411 800511 . + 0 ID=cds-UUE98946.1;Parent=gene-NDY24_03565;Dbxref=NCBI_GP:UUE98946.1;Name=UUE98946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507046.1;locus_tag=NDY24_03565;product=NADH:flavin oxidoreductase/NADH oxidase;protein_id=UUE98946.1;transl_table=11 CP098602.1 Genbank gene 801636 803960 . - . ID=gene-NDY24_03570;Name=NDY24_03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03570 CP098602.1 Protein Homology CDS 801636 803960 . - 0 ID=cds-UUE98947.1;Parent=gene-NDY24_03570;Dbxref=NCBI_GP:UUE98947.1;Name=UUE98947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304704.1;locus_tag=NDY24_03570;product=hypothetical protein;protein_id=UUE98947.1;transl_table=11 CP098602.1 Genbank gene 803985 805856 . - . ID=gene-NDY24_03575;Name=NDY24_03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03575 CP098602.1 Protein Homology CDS 803985 805856 . - 0 ID=cds-UUE98948.1;Parent=gene-NDY24_03575;Dbxref=NCBI_GP:UUE98948.1;Name=UUE98948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005928780.1;locus_tag=NDY24_03575;product=ATP-binding protein;protein_id=UUE98948.1;transl_table=11 CP098602.1 Genbank gene 806074 807429 . - . ID=gene-NDY24_03580;Name=NDY24_03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03580 CP098602.1 Protein Homology CDS 806074 807429 . - 0 ID=cds-UUE98949.1;Parent=gene-NDY24_03580;Dbxref=NCBI_GP:UUE98949.1;Name=UUE98949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156588.1;locus_tag=NDY24_03580;product=helix-turn-helix transcriptional regulator;protein_id=UUE98949.1;transl_table=11 CP098602.1 Genbank gene 808350 809135 . + . ID=gene-NDY24_03585;Name=NDY24_03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03585 CP098602.1 Protein Homology CDS 808350 809135 . + 0 ID=cds-UUF00265.1;Parent=gene-NDY24_03585;Dbxref=NCBI_GP:UUF00265.1;Name=UUF00265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450582.1;locus_tag=NDY24_03585;product=response regulator transcription factor;protein_id=UUF00265.1;transl_table=11 CP098602.1 Genbank gene 809258 809644 . - . ID=gene-NDY24_03590;Name=NDY24_03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03590 CP098602.1 Protein Homology CDS 809258 809644 . - 0 ID=cds-UUE98950.1;Parent=gene-NDY24_03590;Dbxref=NCBI_GP:UUE98950.1;Name=UUE98950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365837.1;locus_tag=NDY24_03590;product=DUF805 domain-containing protein;protein_id=UUE98950.1;transl_table=11 CP098602.1 Genbank gene 809913 811304 . - . ID=gene-NDY24_03595;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=NDY24_03595 CP098602.1 Protein Homology CDS 809913 811304 . - 0 ID=cds-UUE98951.1;Parent=gene-NDY24_03595;Dbxref=NCBI_GP:UUE98951.1;Name=UUE98951.1;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484290.1;locus_tag=NDY24_03595;product=DNA repair protein RadA;protein_id=UUE98951.1;transl_table=11 CP098602.1 Genbank gene 811637 813517 . - . ID=gene-NDY24_03600;Name=NDY24_03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03600 CP098602.1 Protein Homology CDS 811637 813517 . - 0 ID=cds-UUE98952.1;Parent=gene-NDY24_03600;Dbxref=NCBI_GP:UUE98952.1;Name=UUE98952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346766.1;locus_tag=NDY24_03600;product=tetratricopeptide repeat protein;protein_id=UUE98952.1;transl_table=11 CP098602.1 Genbank gene 813688 814023 . - . ID=gene-NDY24_03605;Name=cyoD;gbkey=Gene;gene=cyoD;gene_biotype=protein_coding;locus_tag=NDY24_03605 CP098602.1 Protein Homology CDS 813688 814023 . - 0 ID=cds-UUE98953.1;Parent=gene-NDY24_03605;Dbxref=NCBI_GP:UUE98953.1;Name=UUE98953.1;Ontology_term=GO:0015990,GO:0009486,GO:0016021;gbkey=CDS;gene=cyoD;go_component=integral component of membrane|0016021||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156584.1;locus_tag=NDY24_03605;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=UUE98953.1;transl_table=11 CP098602.1 Genbank pseudogene 814023 814652 . - . ID=gene-NDY24_03610;Name=cyoC;gbkey=Gene;gene=cyoC;gene_biotype=pseudogene;locus_tag=NDY24_03610;pseudo=true CP098602.1 Protein Homology CDS 814023 814652 . - 0 ID=cds-NDY24_03610;Parent=gene-NDY24_03610;Note=internal stop;Ontology_term=GO:0015990,GO:0009486,GO:0016021;gbkey=CDS;gene=cyoC;go_component=integral component of membrane|0016021||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851535.1;locus_tag=NDY24_03610;product=cytochrome o ubiquinol oxidase subunit III;pseudo=true;transl_table=11 CP098602.1 Genbank gene 814649 816649 . - . ID=gene-NDY24_03615;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=NDY24_03615 CP098602.1 Protein Homology CDS 814649 816649 . - 0 ID=cds-UUE98954.1;Parent=gene-NDY24_03615;Dbxref=NCBI_GP:UUE98954.1;Name=UUE98954.1;Ontology_term=GO:0015990,GO:0009486,GO:0016021;gbkey=CDS;gene=cyoB;go_component=integral component of membrane|0016021||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472398.1;locus_tag=NDY24_03615;product=cytochrome o ubiquinol oxidase subunit I;protein_id=UUE98954.1;transl_table=11 CP098602.1 Genbank gene 816649 817599 . - . ID=gene-NDY24_03620;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=NDY24_03620 CP098602.1 Protein Homology CDS 816649 817599 . - 0 ID=cds-UUE98955.1;Parent=gene-NDY24_03620;Dbxref=NCBI_GP:UUE98955.1;Name=UUE98955.1;Ontology_term=GO:0015990,GO:0009486,GO:0016021;gbkey=CDS;gene=cyoA;go_component=integral component of membrane|0016021||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300511.1;locus_tag=NDY24_03620;product=ubiquinol oxidase subunit II;protein_id=UUE98955.1;transl_table=11 CP098602.1 Genbank gene 817963 818038 . - . ID=gene-NDY24_03625;Name=NDY24_03625;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_03625 CP098602.1 tRNAscan-SE tRNA 817963 818038 . - . ID=rna-NDY24_03625;Parent=gene-NDY24_03625;anticodon=(pos:complement(818003..818005));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_03625;product=tRNA-Thr CP098602.1 tRNAscan-SE exon 817963 818038 . - . ID=exon-NDY24_03625-1;Parent=rna-NDY24_03625;anticodon=(pos:complement(818003..818005));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_03625;product=tRNA-Thr CP098602.1 Genbank gene 818222 819172 . - . ID=gene-NDY24_03630;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=NDY24_03630 CP098602.1 Protein Homology CDS 818222 819172 . - 0 ID=cds-UUE98956.1;Parent=gene-NDY24_03630;Dbxref=NCBI_GP:UUE98956.1;Name=UUE98956.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156582.1;locus_tag=NDY24_03630;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=UUE98956.1;transl_table=11 CP098602.1 Genbank gene 819252 819764 . - . ID=gene-NDY24_03635;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=NDY24_03635 CP098602.1 Protein Homology CDS 819252 819764 . - 0 ID=cds-UUE98957.1;Parent=gene-NDY24_03635;Dbxref=NCBI_GP:UUE98957.1;Name=UUE98957.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005887;gbkey=CDS;gene=lspA;go_component=integral component of plasma membrane|0005887||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450190.1;locus_tag=NDY24_03635;product=signal peptidase II;protein_id=UUE98957.1;transl_table=11 CP098602.1 Genbank gene 820101 822932 . - . ID=gene-NDY24_03640;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=NDY24_03640 CP098602.1 Protein Homology CDS 820101 822932 . - 0 ID=cds-UUE98958.1;Parent=gene-NDY24_03640;Dbxref=NCBI_GP:UUE98958.1;Name=UUE98958.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005928804.1;locus_tag=NDY24_03640;product=isoleucine--tRNA ligase;protein_id=UUE98958.1;transl_table=11 CP098602.1 Genbank gene 822939 823973 . - . ID=gene-NDY24_03645;Name=NDY24_03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03645 CP098602.1 Protein Homology CDS 822939 823973 . - 0 ID=cds-UUE98959.1;Parent=gene-NDY24_03645;Dbxref=NCBI_GP:UUE98959.1;Name=UUE98959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165409.1;locus_tag=NDY24_03645;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=UUE98959.1;transl_table=11 CP098602.1 Genbank gene 824181 825773 . - . ID=gene-NDY24_03650;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=NDY24_03650 CP098602.1 Protein Homology CDS 824181 825773 . - 0 ID=cds-UUF00266.1;Parent=gene-NDY24_03650;Dbxref=NCBI_GP:UUF00266.1;Name=UUF00266.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158642.1;locus_tag=NDY24_03650;product=murein biosynthesis integral membrane protein MurJ;protein_id=UUF00266.1;transl_table=11 CP098602.1 Genbank gene 825890 826159 . + . ID=gene-NDY24_03655;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=NDY24_03655 CP098602.1 Protein Homology CDS 825890 826159 . + 0 ID=cds-UUE98960.1;Parent=gene-NDY24_03655;Dbxref=NCBI_GP:UUE98960.1;Name=UUE98960.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019184515.1;locus_tag=NDY24_03655;product=30S ribosomal protein S20;protein_id=UUE98960.1;transl_table=11 CP098602.1 Genbank gene 826251 827303 . - . ID=gene-NDY24_03660;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=NDY24_03660 CP098602.1 Protein Homology CDS 826251 827303 . - 0 ID=cds-UUE98961.1;Parent=gene-NDY24_03660;Dbxref=NCBI_GP:UUE98961.1;Name=UUE98961.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=obgE;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036350.1;locus_tag=NDY24_03660;product=GTPase ObgE;protein_id=UUE98961.1;transl_table=11 CP098602.1 Genbank gene 827554 827814 . - . ID=gene-NDY24_03665;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=NDY24_03665 CP098602.1 Protein Homology CDS 827554 827814 . - 0 ID=cds-UUE98962.1;Parent=gene-NDY24_03665;Dbxref=NCBI_GP:UUE98962.1;Name=UUE98962.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013534652.1;locus_tag=NDY24_03665;product=50S ribosomal protein L27;protein_id=UUE98962.1;transl_table=11 CP098602.1 Genbank gene 827827 828153 . - . ID=gene-NDY24_03670;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=NDY24_03670 CP098602.1 Protein Homology CDS 827827 828153 . - 0 ID=cds-UUF00267.1;Parent=gene-NDY24_03670;Dbxref=NCBI_GP:UUF00267.1;Name=UUF00267.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484328.1;locus_tag=NDY24_03670;product=50S ribosomal protein L21;protein_id=UUF00267.1;transl_table=11 CP098602.1 Genbank gene 828474 831440 . + . ID=gene-NDY24_03675;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=NDY24_03675 CP098602.1 Protein Homology CDS 828474 831440 . + 0 ID=cds-UUE98963.1;Parent=gene-NDY24_03675;Dbxref=NCBI_GP:UUE98963.1;Name=UUE98963.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504280.1;locus_tag=NDY24_03675;product=excinuclease ABC subunit UvrA;protein_id=UUE98963.1;transl_table=11 CP098602.1 Genbank gene 831440 831859 . + . ID=gene-NDY24_03680;Name=NDY24_03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03680 CP098602.1 Protein Homology CDS 831440 831859 . + 0 ID=cds-UUE98964.1;Parent=gene-NDY24_03680;Dbxref=NCBI_GP:UUE98964.1;Name=UUE98964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017912417.1;locus_tag=NDY24_03680;product=acyl-CoA thioesterase;protein_id=UUE98964.1;transl_table=11 CP098602.1 Genbank gene 832116 832544 . - . ID=gene-NDY24_03685;Name=NDY24_03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03685 CP098602.1 Protein Homology CDS 832116 832544 . - 0 ID=cds-UUF00268.1;Parent=gene-NDY24_03685;Dbxref=NCBI_GP:UUF00268.1;Name=UUF00268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089634.1;locus_tag=NDY24_03685;product=copper chaperone PCu(A)C;protein_id=UUF00268.1;transl_table=11 CP098602.1 Genbank gene 832610 833380 . + . ID=gene-NDY24_03690;Name=NDY24_03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03690 CP098602.1 Protein Homology CDS 832610 833380 . + 0 ID=cds-UUE98965.1;Parent=gene-NDY24_03690;Dbxref=NCBI_GP:UUE98965.1;Name=UUE98965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156572.1;locus_tag=NDY24_03690;product=enoyl-CoA hydratase/isomerase family protein;protein_id=UUE98965.1;transl_table=11 CP098602.1 Genbank gene 833454 834392 . + . ID=gene-NDY24_03695;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=NDY24_03695 CP098602.1 Protein Homology CDS 833454 834392 . + 0 ID=cds-UUE98966.1;Parent=gene-NDY24_03695;Dbxref=NCBI_GP:UUE98966.1;Name=UUE98966.1;Ontology_term=GO:0006637,GO:0047617;gbkey=CDS;gene=tesB;go_function=acyl-CoA hydrolase activity|0047617||IEA;go_process=acyl-CoA metabolic process|0006637||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901707.1;locus_tag=NDY24_03695;product=acyl-CoA thioesterase II;protein_id=UUE98966.1;transl_table=11 CP098602.1 Genbank gene 834517 835020 . + . ID=gene-NDY24_03700;Name=NDY24_03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03700 CP098602.1 Protein Homology CDS 834517 835020 . + 0 ID=cds-UUE98967.1;Parent=gene-NDY24_03700;Dbxref=NCBI_GP:UUE98967.1;Name=UUE98967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156570.1;locus_tag=NDY24_03700;product=DUF2007 domain-containing protein;protein_id=UUE98967.1;transl_table=11 CP098602.1 Genbank pseudogene 835117 836308 . + . ID=gene-NDY24_03705;Name=NDY24_03705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_03705;pseudo=true CP098602.1 Protein Homology CDS 835117 836308 . + 0 ID=cds-NDY24_03705;Parent=gene-NDY24_03705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156569.1;locus_tag=NDY24_03705;product=sigma-70 family RNA polymerase sigma factor;pseudo=true;transl_table=11 CP098602.1 Genbank gene 836500 837096 . - . ID=gene-NDY24_03710;Name=NDY24_03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03710 CP098602.1 Protein Homology CDS 836500 837096 . - 0 ID=cds-UUE98968.1;Parent=gene-NDY24_03710;Dbxref=NCBI_GP:UUE98968.1;Name=UUE98968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036342.1;locus_tag=NDY24_03710;product=EF-hand domain-containing protein;protein_id=UUE98968.1;transl_table=11 CP098602.1 Genbank gene 837137 838051 . + . ID=gene-NDY24_03715;Name=NDY24_03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03715 CP098602.1 Protein Homology CDS 837137 838051 . + 0 ID=cds-UUE98969.1;Parent=gene-NDY24_03715;Dbxref=NCBI_GP:UUE98969.1;Name=UUE98969.1;Ontology_term=GO:0016598,GO:0004057,GO:0008914;gbkey=CDS;go_function=arginyltransferase activity|0004057||IEA,leucyltransferase activity|0008914||IEA;go_process=protein arginylation|0016598||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016944959.1;locus_tag=NDY24_03715;product=arginyltransferase;protein_id=UUE98969.1;transl_table=11 CP098602.1 Genbank gene 838104 839330 . + . ID=gene-NDY24_03720;Name=NDY24_03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03720 CP098602.1 Protein Homology CDS 838104 839330 . + 0 ID=cds-UUE98970.1;Parent=gene-NDY24_03720;Dbxref=NCBI_GP:UUE98970.1;Name=UUE98970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258384.1;locus_tag=NDY24_03720;product=endonuclease/exonuclease/phosphatase family protein;protein_id=UUE98970.1;transl_table=11 CP098602.1 Genbank gene 839608 840204 . + . ID=gene-NDY24_03725;Name=NDY24_03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03725 CP098602.1 GeneMarkS-2+ CDS 839608 840204 . + 0 ID=cds-UUE98971.1;Parent=gene-NDY24_03725;Dbxref=NCBI_GP:UUE98971.1;Name=UUE98971.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_03725;product=hypothetical protein;protein_id=UUE98971.1;transl_table=11 CP098602.1 Genbank gene 840229 841278 . + . ID=gene-NDY24_03730;Name=NDY24_03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03730 CP098602.1 Protein Homology CDS 840229 841278 . + 0 ID=cds-UUE98972.1;Parent=gene-NDY24_03730;Dbxref=NCBI_GP:UUE98972.1;Name=UUE98972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036338.1;locus_tag=NDY24_03730;product=hypothetical protein;protein_id=UUE98972.1;transl_table=11 CP098602.1 Genbank pseudogene 841411 842614 . - . ID=gene-NDY24_03735;Name=purT;gbkey=Gene;gene=purT;gene_biotype=pseudogene;locus_tag=NDY24_03735;pseudo=true CP098602.1 Protein Homology CDS 841411 842614 . - 0 ID=cds-NDY24_03735;Parent=gene-NDY24_03735;Note=frameshifted;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472403.1;locus_tag=NDY24_03735;product=formate-dependent phosphoribosylglycinamide formyltransferase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 842741 843607 . + . ID=gene-NDY24_03740;Name=NDY24_03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03740 CP098602.1 Protein Homology CDS 842741 843607 . + 0 ID=cds-UUE98973.1;Parent=gene-NDY24_03740;Dbxref=NCBI_GP:UUE98973.1;Name=UUE98973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507017.1;locus_tag=NDY24_03740;product=SPFH domain-containing protein;protein_id=UUE98973.1;transl_table=11 CP098602.1 Genbank gene 843617 843901 . + . ID=gene-NDY24_03745;Name=NDY24_03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03745 CP098602.1 Protein Homology CDS 843617 843901 . + 0 ID=cds-UUE98974.1;Parent=gene-NDY24_03745;Dbxref=NCBI_GP:UUE98974.1;Name=UUE98974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156562.1;locus_tag=NDY24_03745;product=hypothetical protein;protein_id=UUE98974.1;transl_table=11 CP098602.1 Genbank gene 843898 844077 . + . ID=gene-NDY24_03750;Name=NDY24_03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03750 CP098602.1 Protein Homology CDS 843898 844077 . + 0 ID=cds-UUE98975.1;Parent=gene-NDY24_03750;Dbxref=NCBI_GP:UUE98975.1;Name=UUE98975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036334.1;locus_tag=NDY24_03750;product=Arc family DNA binding domain-containing protein;protein_id=UUE98975.1;transl_table=11 CP098602.1 Genbank gene 844074 844253 . + . ID=gene-NDY24_03755;Name=NDY24_03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03755 CP098602.1 Protein Homology CDS 844074 844253 . + 0 ID=cds-UUE98976.1;Parent=gene-NDY24_03755;Dbxref=NCBI_GP:UUE98976.1;Name=UUE98976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036333.1;locus_tag=NDY24_03755;product=DUF4177 domain-containing protein;protein_id=UUE98976.1;transl_table=11 CP098602.1 Genbank gene 844426 845226 . + . ID=gene-NDY24_03760;Name=NDY24_03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03760 CP098602.1 Protein Homology CDS 844426 845226 . + 0 ID=cds-UUE98977.1;Parent=gene-NDY24_03760;Dbxref=NCBI_GP:UUE98977.1;Name=UUE98977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450017.1;locus_tag=NDY24_03760;product=D-alanyl-D-alanine carboxypeptidase family protein;protein_id=UUE98977.1;transl_table=11 CP098602.1 Genbank pseudogene 845302 845976 . - . ID=gene-NDY24_03765;Name=NDY24_03765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_03765;pseudo=true CP098602.1 Protein Homology CDS 845302 845976 . - 0 ID=cds-NDY24_03765;Parent=gene-NDY24_03765;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574704.1;locus_tag=NDY24_03765;product=DNA-3-methyladenine glycosylase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 845979 846365 . - . ID=gene-NDY24_03770;Name=NDY24_03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03770 CP098602.1 Protein Homology CDS 845979 846365 . - 0 ID=cds-UUE98978.1;Parent=gene-NDY24_03770;Dbxref=NCBI_GP:UUE98978.1;Name=UUE98978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574702.1;locus_tag=NDY24_03770;product=DUF423 domain-containing protein;protein_id=UUE98978.1;transl_table=11 CP098602.1 Genbank gene 846447 847616 . - . ID=gene-NDY24_03775;Name=NDY24_03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03775 CP098602.1 Protein Homology CDS 846447 847616 . - 0 ID=cds-UUE98979.1;Parent=gene-NDY24_03775;Dbxref=NCBI_GP:UUE98979.1;Name=UUE98979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117313.1;locus_tag=NDY24_03775;product=SRPBCC family protein;protein_id=UUE98979.1;transl_table=11 CP098602.1 Genbank gene 848018 848659 . - . ID=gene-NDY24_03780;Name=NDY24_03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03780 CP098602.1 Protein Homology CDS 848018 848659 . - 0 ID=cds-UUE98980.1;Parent=gene-NDY24_03780;Dbxref=NCBI_GP:UUE98980.1;Name=UUE98980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002807809.1;locus_tag=NDY24_03780;product=response regulator transcription factor;protein_id=UUE98980.1;transl_table=11 CP098602.1 Genbank gene 848660 849856 . - . ID=gene-NDY24_03785;Name=NDY24_03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03785 CP098602.1 Protein Homology CDS 848660 849856 . - 0 ID=cds-UUE98981.1;Parent=gene-NDY24_03785;Dbxref=NCBI_GP:UUE98981.1;Name=UUE98981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901692.1;locus_tag=NDY24_03785;product=sensor histidine kinase;protein_id=UUE98981.1;transl_table=11 CP098602.1 Genbank gene 850082 850681 . + . ID=gene-NDY24_03790;Name=NDY24_03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03790 CP098602.1 Protein Homology CDS 850082 850681 . + 0 ID=cds-UUE98982.1;Parent=gene-NDY24_03790;Dbxref=NCBI_GP:UUE98982.1;Name=UUE98982.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156556.1;locus_tag=NDY24_03790;product=GNAT family N-acetyltransferase;protein_id=UUE98982.1;transl_table=11 CP098602.1 Genbank gene 850685 851431 . + . ID=gene-NDY24_03795;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=NDY24_03795 CP098602.1 Protein Homology CDS 850685 851431 . + 0 ID=cds-UUE98983.1;Parent=gene-NDY24_03795;Dbxref=NCBI_GP:UUE98983.1;Name=UUE98983.1;Ontology_term=GO:0000918,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007973818.1;locus_tag=NDY24_03795;product=septum site-determining protein MinC;protein_id=UUE98983.1;transl_table=11 CP098602.1 Genbank pseudogene 851468 852274 . + . ID=gene-NDY24_03800;Name=minD;gbkey=Gene;gene=minD;gene_biotype=pseudogene;locus_tag=NDY24_03800;pseudo=true CP098602.1 Protein Homology CDS 851468 852274 . + 0 ID=cds-NDY24_03800;Parent=gene-NDY24_03800;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0000918,GO:0016887;gbkey=CDS;gene=minD;go_function=ATP hydrolysis activity|0016887||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006424120.1;locus_tag=NDY24_03800;product=septum site-determining protein MinD;pseudo=true;transl_table=11 CP098602.1 Genbank gene 852280 852537 . + . ID=gene-NDY24_03805;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=NDY24_03805 CP098602.1 Protein Homology CDS 852280 852537 . + 0 ID=cds-UUE98984.1;Parent=gene-NDY24_03805;Dbxref=NCBI_GP:UUE98984.1;Name=UUE98984.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036323.1;locus_tag=NDY24_03805;product=cell division topological specificity factor MinE;protein_id=UUE98984.1;transl_table=11 CP098602.1 Genbank gene 852721 853173 . + . ID=gene-NDY24_03810;Name=NDY24_03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03810 CP098602.1 Protein Homology CDS 852721 853173 . + 0 ID=cds-UUE98985.1;Parent=gene-NDY24_03810;Dbxref=NCBI_GP:UUE98985.1;Name=UUE98985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484372.1;locus_tag=NDY24_03810;product=hypothetical protein;protein_id=UUE98985.1;transl_table=11 CP098602.1 Genbank gene 853343 854641 . - . ID=gene-NDY24_03815;Name=NDY24_03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03815 CP098602.1 Protein Homology CDS 853343 854641 . - 0 ID=cds-UUE98986.1;Parent=gene-NDY24_03815;Dbxref=NCBI_GP:UUE98986.1;Name=UUE98986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450027.1;locus_tag=NDY24_03815;product=HAMP domain-containing histidine kinase;protein_id=UUE98986.1;transl_table=11 CP098602.1 Genbank gene 854634 855350 . - . ID=gene-NDY24_03820;Name=NDY24_03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03820 CP098602.1 Protein Homology CDS 854634 855350 . - 0 ID=cds-UUE98987.1;Parent=gene-NDY24_03820;Dbxref=NCBI_GP:UUE98987.1;Name=UUE98987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450028.1;locus_tag=NDY24_03820;product=response regulator transcription factor;protein_id=UUE98987.1;transl_table=11 CP098602.1 Genbank pseudogene 855487 857222 . + . ID=gene-NDY24_03825;Name=NDY24_03825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_03825;pseudo=true CP098602.1 Protein Homology CDS 855487 857222 . + 0 ID=cds-NDY24_03825;Parent=gene-NDY24_03825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930293.1;locus_tag=NDY24_03825;product=glycosyltransferase family 39 protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 857321 858085 . + . ID=gene-NDY24_03830;Name=NDY24_03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03830 CP098602.1 Protein Homology CDS 857321 858085 . + 0 ID=cds-UUE98988.1;Parent=gene-NDY24_03830;Dbxref=NCBI_GP:UUE98988.1;Name=UUE98988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089620.1;locus_tag=NDY24_03830;product=phosphatase PAP2 family protein;protein_id=UUE98988.1;transl_table=11 CP098602.1 Genbank gene 858082 859737 . + . ID=gene-NDY24_03835;Name=NDY24_03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03835 CP098602.1 Protein Homology CDS 858082 859737 . + 0 ID=cds-UUE98989.1;Parent=gene-NDY24_03835;Dbxref=NCBI_GP:UUE98989.1;Name=UUE98989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036317.1;locus_tag=NDY24_03835;product=phosphoethanolamine transferase;protein_id=UUE98989.1;transl_table=11 CP098602.1 Genbank pseudogene 860553 862578 . + . ID=gene-NDY24_03840;Name=NDY24_03840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_03840;pseudo=true CP098602.1 Protein Homology CDS 860553 862578 . + 0 ID=cds-NDY24_03840;Parent=gene-NDY24_03840;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452790.1;locus_tag=NDY24_03840;product=M2 family metallopeptidase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 862711 864645 . + . ID=gene-NDY24_03845;Name=NDY24_03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03845 CP098602.1 Protein Homology CDS 862711 864645 . + 0 ID=cds-UUE98990.1;Parent=gene-NDY24_03845;Dbxref=NCBI_GP:UUE98990.1;Name=UUE98990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452791.1;locus_tag=NDY24_03845;product=hypothetical protein;protein_id=UUE98990.1;transl_table=11 CP098602.1 Genbank gene 864880 865281 . - . ID=gene-NDY24_03850;Name=NDY24_03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03850 CP098602.1 Protein Homology CDS 864880 865281 . - 0 ID=cds-UUE98991.1;Parent=gene-NDY24_03850;Dbxref=NCBI_GP:UUE98991.1;Name=UUE98991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452792.1;locus_tag=NDY24_03850;product=hypothetical protein;protein_id=UUE98991.1;transl_table=11 CP098602.1 Genbank gene 865298 866551 . - . ID=gene-NDY24_03855;Name=NDY24_03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03855 CP098602.1 Protein Homology CDS 865298 866551 . - 0 ID=cds-UUE98992.1;Parent=gene-NDY24_03855;Dbxref=NCBI_GP:UUE98992.1;Name=UUE98992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017164622.1;locus_tag=NDY24_03855;product=multidrug effflux MFS transporter;protein_id=UUE98992.1;transl_table=11 CP098602.1 cmsearch riboswitch 866819 866933 . + . ID=id-CP098602.1:866819..866933;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP098602.1 Genbank gene 867023 869896 . + . ID=gene-NDY24_03860;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=NDY24_03860 CP098602.1 Protein Homology CDS 867023 869896 . + 0 ID=cds-UUE98993.1;Parent=gene-NDY24_03860;Dbxref=NCBI_GP:UUE98993.1;Name=UUE98993.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172050.1;locus_tag=NDY24_03860;product=aminomethyl-transferring glycine dehydrogenase;protein_id=UUE98993.1;transl_table=11 CP098602.1 Genbank gene 870217 871845 . + . ID=gene-NDY24_03865;Name=NDY24_03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03865 CP098602.1 Protein Homology CDS 870217 871845 . + 0 ID=cds-UUE98994.1;Parent=gene-NDY24_03865;Dbxref=NCBI_GP:UUE98994.1;Name=UUE98994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448823.1;locus_tag=NDY24_03865;product=carboxylesterase family protein;protein_id=UUE98994.1;transl_table=11 CP098602.1 Genbank gene 871906 872760 . + . ID=gene-NDY24_03870;Name=NDY24_03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03870 CP098602.1 Protein Homology CDS 871906 872760 . + 0 ID=cds-UUE98995.1;Parent=gene-NDY24_03870;Dbxref=NCBI_GP:UUE98995.1;Name=UUE98995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050780.1;locus_tag=NDY24_03870;product=aldo/keto reductase;protein_id=UUE98995.1;transl_table=11 CP098602.1 Genbank gene 873006 873079 . + . ID=gene-NDY24_03875;Name=NDY24_03875;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_03875 CP098602.1 cmsearch ncRNA 873006 873079 . + . ID=rna-NDY24_03875;Parent=gene-NDY24_03875;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_03875;product=sX9 sRNA CP098602.1 cmsearch exon 873006 873079 . + . ID=exon-NDY24_03875-1;Parent=rna-NDY24_03875;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_03875;product=sX9 sRNA CP098602.1 Genbank gene 873106 875214 . + . ID=gene-NDY24_03880;Name=NDY24_03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03880 CP098602.1 Protein Homology CDS 873106 875214 . + 0 ID=cds-UUE98996.1;Parent=gene-NDY24_03880;Dbxref=NCBI_GP:UUE98996.1;Name=UUE98996.1;Ontology_term=GO:0004096,GO:0020037;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154698.1;locus_tag=NDY24_03880;product=catalase;protein_id=UUE98996.1;transl_table=11 CP098602.1 Genbank gene 875912 876646 . - . ID=gene-NDY24_03885;Name=NDY24_03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03885 CP098602.1 Protein Homology CDS 875912 876646 . - 0 ID=cds-UUE98997.1;Parent=gene-NDY24_03885;Dbxref=NCBI_GP:UUE98997.1;Name=UUE98997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371630.1;locus_tag=NDY24_03885;product=AraC family transcriptional regulator;protein_id=UUE98997.1;transl_table=11 CP098602.1 Genbank gene 876779 877261 . - . ID=gene-NDY24_03890;Name=NDY24_03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03890 CP098602.1 Protein Homology CDS 876779 877261 . - 0 ID=cds-UUE98998.1;Parent=gene-NDY24_03890;Dbxref=NCBI_GP:UUE98998.1;Name=UUE98998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346711.1;locus_tag=NDY24_03890;product=hypothetical protein;protein_id=UUE98998.1;transl_table=11 CP098602.1 Genbank gene 877583 879703 . - . ID=gene-NDY24_03895;Name=NDY24_03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03895 CP098602.1 Protein Homology CDS 877583 879703 . - 0 ID=cds-UUE98999.1;Parent=gene-NDY24_03895;Dbxref=NCBI_GP:UUE98999.1;Name=UUE98999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169463.1;locus_tag=NDY24_03895;product=S9 family peptidase;protein_id=UUE98999.1;transl_table=11 CP098602.1 Genbank gene 880070 880912 . - . ID=gene-NDY24_03900;Name=NDY24_03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03900 CP098602.1 Protein Homology CDS 880070 880912 . - 0 ID=cds-UUF00269.1;Parent=gene-NDY24_03900;Dbxref=NCBI_GP:UUF00269.1;Name=UUF00269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158565.1;locus_tag=NDY24_03900;product=transporter;protein_id=UUF00269.1;transl_table=11 CP098602.1 Genbank gene 881461 883437 . - . ID=gene-NDY24_03905;Name=NDY24_03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03905 CP098602.1 Protein Homology CDS 881461 883437 . - 0 ID=cds-UUF00270.1;Parent=gene-NDY24_03905;Dbxref=NCBI_GP:UUF00270.1;Name=UUF00270.1;Ontology_term=GO:0006857,GO:0035673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oligopeptide transmembrane transporter activity|0035673||IEA;go_process=oligopeptide transport|0006857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346708.1;locus_tag=NDY24_03905;product=oligopeptide transporter%2C OPT family;protein_id=UUF00270.1;transl_table=11 CP098602.1 Genbank gene 883689 884192 . + . ID=gene-NDY24_03910;Name=NDY24_03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03910 CP098602.1 GeneMarkS-2+ CDS 883689 884192 . + 0 ID=cds-UUF00531.1;Parent=gene-NDY24_03910;Dbxref=NCBI_GP:UUF00531.1;Name=UUF00531.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_03910;product=hypothetical protein;protein_id=UUF00531.1;transl_table=11 CP098602.1 Genbank gene 884102 884320 . + . ID=gene-NDY24_03915;Name=NDY24_03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03915 CP098602.1 Protein Homology CDS 884102 884320 . + 0 ID=cds-UUF00271.1;Parent=gene-NDY24_03915;Dbxref=NCBI_GP:UUF00271.1;Name=UUF00271.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023996.2;locus_tag=NDY24_03915;product=DUF3757 domain-containing protein;protein_id=UUF00271.1;transl_table=11 CP098602.1 Genbank gene 884358 885179 . - . ID=gene-NDY24_03920;Name=NDY24_03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03920 CP098602.1 Protein Homology CDS 884358 885179 . - 0 ID=cds-UUF00272.1;Parent=gene-NDY24_03920;Dbxref=NCBI_GP:UUF00272.1;Name=UUF00272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445639.1;locus_tag=NDY24_03920;product=HDOD domain-containing protein;protein_id=UUF00272.1;transl_table=11 CP098602.1 Genbank gene 885524 888784 . - . ID=gene-NDY24_03925;Name=NDY24_03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03925 CP098602.1 Protein Homology CDS 885524 888784 . - 0 ID=cds-UUE99000.1;Parent=gene-NDY24_03925;Dbxref=NCBI_GP:UUE99000.1;Name=UUE99000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445640.1;locus_tag=NDY24_03925;product=error-prone DNA polymerase;protein_id=UUE99000.1;transl_table=11 CP098602.1 Genbank gene 888950 890368 . - . ID=gene-NDY24_03930;Name=NDY24_03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03930 CP098602.1 Protein Homology CDS 888950 890368 . - 0 ID=cds-UUE99001.1;Parent=gene-NDY24_03930;Dbxref=NCBI_GP:UUE99001.1;Name=UUE99001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502328.1;locus_tag=NDY24_03930;product=DNA polymerase Y family protein;protein_id=UUE99001.1;transl_table=11 CP098602.1 Genbank gene 890378 891031 . - . ID=gene-NDY24_03935;Name=imuA;gbkey=Gene;gene=imuA;gene_biotype=protein_coding;locus_tag=NDY24_03935 CP098602.1 Protein Homology CDS 890378 891031 . - 0 ID=cds-UUE99002.1;Parent=gene-NDY24_03935;Dbxref=NCBI_GP:UUE99002.1;Name=UUE99002.1;Ontology_term=GO:0009432,GO:0051782;gbkey=CDS;gene=imuA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116014.1;locus_tag=NDY24_03935;product=translesion DNA synthesis-associated protein ImuA;protein_id=UUE99002.1;transl_table=11 CP098602.1 Genbank gene 891033 891650 . - . ID=gene-NDY24_03940;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=NDY24_03940 CP098602.1 Protein Homology CDS 891033 891650 . - 0 ID=cds-UUE99003.1;Parent=gene-NDY24_03940;Dbxref=NCBI_GP:UUE99003.1;Name=UUE99003.1;Ontology_term=GO:0006282,GO:0006355,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971824.1;locus_tag=NDY24_03940;product=transcriptional repressor LexA;protein_id=UUE99003.1;transl_table=11 CP098602.1 Genbank gene 891809 892030 . + . ID=gene-NDY24_03945;Name=NDY24_03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03945 CP098602.1 Protein Homology CDS 891809 892030 . + 0 ID=cds-UUE99004.1;Parent=gene-NDY24_03945;Dbxref=NCBI_GP:UUE99004.1;Name=UUE99004.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302153.1;locus_tag=NDY24_03945;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=UUE99004.1;transl_table=11 CP098602.1 Genbank gene 892039 892464 . + . ID=gene-NDY24_03950;Name=NDY24_03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03950 CP098602.1 Protein Homology CDS 892039 892464 . + 0 ID=cds-UUE99005.1;Parent=gene-NDY24_03950;Dbxref=NCBI_GP:UUE99005.1;Name=UUE99005.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157899.1;locus_tag=NDY24_03950;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=UUE99005.1;transl_table=11 CP098602.1 Genbank gene 892705 894009 . - . ID=gene-NDY24_03955;Name=NDY24_03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03955 CP098602.1 Protein Homology CDS 892705 894009 . - 0 ID=cds-UUE99006.1;Parent=gene-NDY24_03955;Dbxref=NCBI_GP:UUE99006.1;Name=UUE99006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922134.1;locus_tag=NDY24_03955;product=endonuclease;protein_id=UUE99006.1;transl_table=11 CP098602.1 Genbank gene 894119 895459 . - . ID=gene-NDY24_03960;Name=NDY24_03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03960 CP098602.1 Protein Homology CDS 894119 895459 . - 0 ID=cds-UUF00273.1;Parent=gene-NDY24_03960;Dbxref=NCBI_GP:UUF00273.1;Name=UUF00273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450809.1;locus_tag=NDY24_03960;product=histidine-type phosphatase;protein_id=UUF00273.1;transl_table=11 CP098602.1 Genbank gene 895774 898671 . - . ID=gene-NDY24_03965;Name=NDY24_03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03965 CP098602.1 Protein Homology CDS 895774 898671 . - 0 ID=cds-UUE99007.1;Parent=gene-NDY24_03965;Dbxref=NCBI_GP:UUE99007.1;Name=UUE99007.1;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010341328.1;locus_tag=NDY24_03965;product=TonB-dependent receptor;protein_id=UUE99007.1;transl_table=11 CP098602.1 Genbank pseudogene 898869 899883 . - . ID=gene-NDY24_03970;Name=NDY24_03970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_03970;pseudo=true CP098602.1 Protein Homology CDS 898869 899883 . - 0 ID=cds-NDY24_03970;Parent=gene-NDY24_03970;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450811.1;locus_tag=NDY24_03970;product=FecR domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 899949 900473 . - . ID=gene-NDY24_03975;Name=NDY24_03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03975 CP098602.1 Protein Homology CDS 899949 900473 . - 0 ID=cds-UUE99008.1;Parent=gene-NDY24_03975;Dbxref=NCBI_GP:UUE99008.1;Name=UUE99008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156343.1;locus_tag=NDY24_03975;product=RNA polymerase sigma factor;protein_id=UUE99008.1;transl_table=11 CP098602.1 Genbank gene 900765 901343 . + . ID=gene-NDY24_03980;Name=NDY24_03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03980 CP098602.1 Protein Homology CDS 900765 901343 . + 0 ID=cds-UUE99009.1;Parent=gene-NDY24_03980;Dbxref=NCBI_GP:UUE99009.1;Name=UUE99009.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920580.1;locus_tag=NDY24_03980;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=UUE99009.1;transl_table=11 CP098602.1 Genbank gene 901316 902401 . + . ID=gene-NDY24_03985;Name=NDY24_03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03985 CP098602.1 Protein Homology CDS 901316 902401 . + 0 ID=cds-UUE99010.1;Parent=gene-NDY24_03985;Dbxref=NCBI_GP:UUE99010.1;Name=UUE99010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005997505.1;locus_tag=NDY24_03985;product=xanthine dehydrogenase family protein subunit M;protein_id=UUE99010.1;transl_table=11 CP098602.1 Genbank gene 902398 904695 . + . ID=gene-NDY24_03990;Name=NDY24_03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03990 CP098602.1 Protein Homology CDS 902398 904695 . + 0 ID=cds-UUE99011.1;Parent=gene-NDY24_03990;Dbxref=NCBI_GP:UUE99011.1;Name=UUE99011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490087.1;locus_tag=NDY24_03990;product=xanthine dehydrogenase family protein molybdopterin-binding subunit;protein_id=UUE99011.1;transl_table=11 CP098602.1 Genbank gene 904874 905446 . - . ID=gene-NDY24_03995;Name=NDY24_03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_03995 CP098602.1 Protein Homology CDS 904874 905446 . - 0 ID=cds-UUE99012.1;Parent=gene-NDY24_03995;Dbxref=NCBI_GP:UUE99012.1;Name=UUE99012.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012655.2;locus_tag=NDY24_03995;product=TetR/AcrR family transcriptional regulator;protein_id=UUE99012.1;transl_table=11 CP098602.1 Genbank pseudogene 905656 905943 . + . ID=gene-NDY24_04000;Name=NDY24_04000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_04000;pseudo=true CP098602.1 Protein Homology CDS 905656 905943 . + 0 ID=cds-NDY24_04000;Parent=gene-NDY24_04000;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019845.2;locus_tag=NDY24_04000;product=alcohol dehydrogenase catalytic domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 906011 906652 . + . ID=gene-NDY24_04005;Name=NDY24_04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04005 CP098602.1 Protein Homology CDS 906011 906652 . + 0 ID=cds-UUE99013.1;Parent=gene-NDY24_04005;Dbxref=NCBI_GP:UUE99013.1;Name=UUE99013.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012335.2;locus_tag=NDY24_04005;product=zinc-binding dehydrogenase;protein_id=UUE99013.1;transl_table=11 CP098602.1 Genbank gene 906735 909020 . + . ID=gene-NDY24_04010;Name=NDY24_04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04010 CP098602.1 Protein Homology CDS 906735 909020 . + 0 ID=cds-UUE99014.1;Parent=gene-NDY24_04010;Dbxref=NCBI_GP:UUE99014.1;Name=UUE99014.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017916167.1;locus_tag=NDY24_04010;product=glycoside hydrolase family 3 C-terminal domain-containing protein;protein_id=UUE99014.1;transl_table=11 CP098602.1 Genbank gene 909406 915555 . - . ID=gene-NDY24_04015;Name=NDY24_04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04015 CP098602.1 Protein Homology CDS 909406 915555 . - 0 ID=cds-UUE99015.1;Parent=gene-NDY24_04015;Dbxref=NCBI_GP:UUE99015.1;Name=UUE99015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438997.1;locus_tag=NDY24_04015;product=transducer protein car;protein_id=UUE99015.1;transl_table=11 CP098602.1 Genbank gene 916087 918663 . - . ID=gene-NDY24_04020;Name=NDY24_04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04020 CP098602.1 Protein Homology CDS 916087 918663 . - 0 ID=cds-UUE99016.1;Parent=gene-NDY24_04020;Dbxref=NCBI_GP:UUE99016.1;Name=UUE99016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452219.1;locus_tag=NDY24_04020;product=excinuclease ABC subunit UvrA;protein_id=UUE99016.1;transl_table=11 CP098602.1 Genbank gene 919373 920011 . - . ID=gene-NDY24_04025;Name=NDY24_04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04025 CP098602.1 Protein Homology CDS 919373 920011 . - 0 ID=cds-UUE99017.1;Parent=gene-NDY24_04025;Dbxref=NCBI_GP:UUE99017.1;Name=UUE99017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346691.1;locus_tag=NDY24_04025;product=HD domain-containing protein;protein_id=UUE99017.1;transl_table=11 CP098602.1 Genbank gene 920158 920904 . + . ID=gene-NDY24_04030;Name=NDY24_04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04030 CP098602.1 Protein Homology CDS 920158 920904 . + 0 ID=cds-UUE99018.1;Parent=gene-NDY24_04030;Dbxref=NCBI_GP:UUE99018.1;Name=UUE99018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172503.1;locus_tag=NDY24_04030;product=EAL domain-containing protein;protein_id=UUE99018.1;transl_table=11 CP098602.1 Genbank gene 921115 921420 . - . ID=gene-NDY24_04035;Name=NDY24_04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04035 CP098602.1 Protein Homology CDS 921115 921420 . - 0 ID=cds-UUE99019.1;Parent=gene-NDY24_04035;Dbxref=NCBI_GP:UUE99019.1;Name=UUE99019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490091.1;locus_tag=NDY24_04035;product=UBP-type zinc finger domain-containing protein;protein_id=UUE99019.1;transl_table=11 CP098602.1 Genbank gene 921417 923126 . - . ID=gene-NDY24_04040;Name=NDY24_04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04040 CP098602.1 Protein Homology CDS 921417 923126 . - 0 ID=cds-UUE99020.1;Parent=gene-NDY24_04040;Dbxref=NCBI_GP:UUE99020.1;Name=UUE99020.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159705.1;locus_tag=NDY24_04040;product=FAD-dependent oxidoreductase;protein_id=UUE99020.1;transl_table=11 CP098602.1 Genbank gene 923340 923969 . - . ID=gene-NDY24_04045;Name=NDY24_04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04045 CP098602.1 Protein Homology CDS 923340 923969 . - 0 ID=cds-UUE99021.1;Parent=gene-NDY24_04045;Dbxref=NCBI_GP:UUE99021.1;Name=UUE99021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005990935.1;locus_tag=NDY24_04045;product=alpha-ketoglutarate-dependent dioxygenase AlkB;protein_id=UUE99021.1;transl_table=11 CP098602.1 Genbank gene 924143 926497 . + . ID=gene-NDY24_04050;Name=NDY24_04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04050 CP098602.1 Protein Homology CDS 924143 926497 . + 0 ID=cds-UUE99022.1;Parent=gene-NDY24_04050;Dbxref=NCBI_GP:UUE99022.1;Name=UUE99022.1;Ontology_term=GO:0005975,GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449277.1;locus_tag=NDY24_04050;product=GH92 family glycosyl hydrolase;protein_id=UUE99022.1;transl_table=11 CP098602.1 Genbank gene 926499 927206 . - . ID=gene-NDY24_04055;Name=NDY24_04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04055 CP098602.1 Protein Homology CDS 926499 927206 . - 0 ID=cds-UUE99023.1;Parent=gene-NDY24_04055;Dbxref=NCBI_GP:UUE99023.1;Name=UUE99023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449279.1;locus_tag=NDY24_04055;product=DUF429 domain-containing protein;protein_id=UUE99023.1;transl_table=11 CP098602.1 Genbank gene 927390 928292 . + . ID=gene-NDY24_04060;Name=NDY24_04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04060 CP098602.1 Protein Homology CDS 927390 928292 . + 0 ID=cds-UUE99024.1;Parent=gene-NDY24_04060;Dbxref=NCBI_GP:UUE99024.1;Name=UUE99024.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506951.1;locus_tag=NDY24_04060;product=SDR family oxidoreductase;protein_id=UUE99024.1;transl_table=11 CP098602.1 Genbank pseudogene 928599 930057 . - . ID=gene-NDY24_04065;Name=NDY24_04065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_04065;pseudo=true CP098602.1 Protein Homology CDS 928599 930057 . - 0 ID=cds-NDY24_04065;Parent=gene-NDY24_04065;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368472.1;locus_tag=NDY24_04065;product=glycosyl hydrolase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 930538 931413 . - . ID=gene-NDY24_04070;Name=NDY24_04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04070 CP098602.1 Protein Homology CDS 930538 931413 . - 0 ID=cds-UUE99025.1;Parent=gene-NDY24_04070;Dbxref=NCBI_GP:UUE99025.1;Name=UUE99025.1;Ontology_term=GO:0052855;gbkey=CDS;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811336.1;locus_tag=NDY24_04070;product=NAD(P)H-hydrate dehydratase;protein_id=UUE99025.1;transl_table=11 CP098602.1 Genbank gene 931413 932192 . - . ID=gene-NDY24_04075;Name=NDY24_04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04075 CP098602.1 Protein Homology CDS 931413 932192 . - 0 ID=cds-UUE99026.1;Parent=gene-NDY24_04075;Dbxref=NCBI_GP:UUE99026.1;Name=UUE99026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490632.1;locus_tag=NDY24_04075;product=histidine phosphatase family protein;protein_id=UUE99026.1;transl_table=11 CP098602.1 Genbank gene 932364 932993 . + . ID=gene-NDY24_04080;Name=NDY24_04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04080 CP098602.1 Protein Homology CDS 932364 932993 . + 0 ID=cds-UUE99027.1;Parent=gene-NDY24_04080;Dbxref=NCBI_GP:UUE99027.1;Name=UUE99027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903342.1;locus_tag=NDY24_04080;product=TetR/AcrR family transcriptional regulator;protein_id=UUE99027.1;transl_table=11 CP098602.1 Genbank gene 933058 933807 . - . ID=gene-NDY24_04085;Name=NDY24_04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04085 CP098602.1 Protein Homology CDS 933058 933807 . - 0 ID=cds-UUE99028.1;Parent=gene-NDY24_04085;Dbxref=NCBI_GP:UUE99028.1;Name=UUE99028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449287.1;locus_tag=NDY24_04085;product=hypothetical protein;protein_id=UUE99028.1;transl_table=11 CP098602.1 Genbank gene 933932 934621 . - . ID=gene-NDY24_04090;Name=NDY24_04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04090 CP098602.1 Protein Homology CDS 933932 934621 . - 0 ID=cds-UUE99029.1;Parent=gene-NDY24_04090;Dbxref=NCBI_GP:UUE99029.1;Name=UUE99029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269951.1;locus_tag=NDY24_04090;product=hypothetical protein;protein_id=UUE99029.1;transl_table=11 CP098602.1 Genbank gene 935157 936497 . + . ID=gene-NDY24_04095;Name=NDY24_04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04095 CP098602.1 Protein Homology CDS 935157 936497 . + 0 ID=cds-UUF00274.1;Parent=gene-NDY24_04095;Dbxref=NCBI_GP:UUF00274.1;Name=UUF00274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439010.1;locus_tag=NDY24_04095;product=nucleoside hydrolase;protein_id=UUF00274.1;transl_table=11 CP098602.1 Genbank pseudogene 936560 936925 . + . ID=gene-NDY24_04100;Name=NDY24_04100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_04100;pseudo=true CP098602.1 Protein Homology CDS 936560 936925 . + 0 ID=cds-NDY24_04100;Parent=gene-NDY24_04100;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802850.1;locus_tag=NDY24_04100;product=transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 936946 937131 . - . ID=gene-NDY24_04105;Name=NDY24_04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04105 CP098602.1 GeneMarkS-2+ CDS 936946 937131 . - 0 ID=cds-UUE99030.1;Parent=gene-NDY24_04105;Dbxref=NCBI_GP:UUE99030.1;Name=UUE99030.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_04105;product=hypothetical protein;protein_id=UUE99030.1;transl_table=11 CP098602.1 Genbank gene 937196 938011 . + . ID=gene-NDY24_04110;Name=NDY24_04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04110 CP098602.1 Protein Homology CDS 937196 938011 . + 0 ID=cds-UUE99031.1;Parent=gene-NDY24_04110;Dbxref=NCBI_GP:UUE99031.1;Name=UUE99031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157176.1;locus_tag=NDY24_04110;product=C1 family peptidase;protein_id=UUE99031.1;transl_table=11 CP098602.1 Genbank gene 938622 939260 . + . ID=gene-NDY24_04115;Name=NDY24_04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04115 CP098602.1 Protein Homology CDS 938622 939260 . + 0 ID=cds-UUE99032.1;Parent=gene-NDY24_04115;Dbxref=NCBI_GP:UUE99032.1;Name=UUE99032.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026241.2;locus_tag=NDY24_04115;product=type III secretion system effector protein;protein_id=UUE99032.1;transl_table=11 CP098602.1 Genbank gene 939455 939724 . - . ID=gene-NDY24_04120;Name=NDY24_04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04120 CP098602.1 Protein Homology CDS 939455 939724 . - 0 ID=cds-UUE99033.1;Parent=gene-NDY24_04120;Dbxref=NCBI_GP:UUE99033.1;Name=UUE99033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269953.1;locus_tag=NDY24_04120;product=hypothetical protein;protein_id=UUE99033.1;transl_table=11 CP098602.1 Genbank gene 939721 940017 . - . ID=gene-NDY24_04125;Name=NDY24_04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04125 CP098602.1 Protein Homology CDS 939721 940017 . - 0 ID=cds-UUE99034.1;Parent=gene-NDY24_04125;Dbxref=NCBI_GP:UUE99034.1;Name=UUE99034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269954.1;locus_tag=NDY24_04125;product=hypothetical protein;protein_id=UUE99034.1;transl_table=11 CP098602.1 Genbank gene 940434 940649 . - . ID=gene-NDY24_04130;Name=NDY24_04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04130 CP098602.1 Protein Homology CDS 940434 940649 . - 0 ID=cds-UUE99035.1;Parent=gene-NDY24_04130;Dbxref=NCBI_GP:UUE99035.1;Name=UUE99035.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024754.2;locus_tag=NDY24_04130;product=hypothetical protein;protein_id=UUE99035.1;transl_table=11 CP098602.1 Genbank gene 940654 941652 . - . ID=gene-NDY24_04135;Name=NDY24_04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04135 CP098602.1 Protein Homology CDS 940654 941652 . - 0 ID=cds-UUE99036.1;Parent=gene-NDY24_04135;Dbxref=NCBI_GP:UUE99036.1;Name=UUE99036.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF024642.2;locus_tag=NDY24_04135;product=UvrD-helicase domain-containing protein;protein_id=UUE99036.1;transl_table=11 CP098602.1 Genbank gene 941616 942023 . - . ID=gene-NDY24_04140;Name=NDY24_04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04140 CP098602.1 GeneMarkS-2+ CDS 941616 942023 . - 0 ID=cds-UUE99037.1;Parent=gene-NDY24_04140;Dbxref=NCBI_GP:UUE99037.1;Name=UUE99037.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_04140;product=hypothetical protein;protein_id=UUE99037.1;transl_table=11 CP098602.1 Genbank gene 941974 942513 . - . ID=gene-NDY24_04145;Name=NDY24_04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04145 CP098602.1 GeneMarkS-2+ CDS 941974 942513 . - 0 ID=cds-UUE99038.1;Parent=gene-NDY24_04145;Dbxref=NCBI_GP:UUE99038.1;Name=UUE99038.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_04145;product=hypothetical protein;protein_id=UUE99038.1;transl_table=11 CP098602.1 Genbank gene 942536 942910 . - . ID=gene-NDY24_04150;Name=NDY24_04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04150 CP098602.1 GeneMarkS-2+ CDS 942536 942910 . - 0 ID=cds-UUE99039.1;Parent=gene-NDY24_04150;Dbxref=NCBI_GP:UUE99039.1;Name=UUE99039.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_04150;product=hypothetical protein;protein_id=UUE99039.1;transl_table=11 CP098602.1 Genbank gene 942907 943329 . - . ID=gene-NDY24_04155;Name=NDY24_04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04155 CP098602.1 GeneMarkS-2+ CDS 942907 943329 . - 0 ID=cds-UUE99040.1;Parent=gene-NDY24_04155;Dbxref=NCBI_GP:UUE99040.1;Name=UUE99040.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_04155;product=hypothetical protein;protein_id=UUE99040.1;transl_table=11 CP098602.1 Genbank gene 943556 943813 . - . ID=gene-NDY24_04160;Name=NDY24_04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04160 CP098602.1 GeneMarkS-2+ CDS 943556 943813 . - 0 ID=cds-UUE99041.1;Parent=gene-NDY24_04160;Dbxref=NCBI_GP:UUE99041.1;Name=UUE99041.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_04160;product=hypothetical protein;protein_id=UUE99041.1;transl_table=11 CP098602.1 Genbank gene 943791 944006 . - . ID=gene-NDY24_04165;Name=NDY24_04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04165 CP098602.1 GeneMarkS-2+ CDS 943791 944006 . - 0 ID=cds-UUE99042.1;Parent=gene-NDY24_04165;Dbxref=NCBI_GP:UUE99042.1;Name=UUE99042.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_04165;product=hypothetical protein;protein_id=UUE99042.1;transl_table=11 CP098602.1 Genbank gene 944011 944247 . - . ID=gene-NDY24_04170;Name=NDY24_04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04170 CP098602.1 GeneMarkS-2+ CDS 944011 944247 . - 0 ID=cds-UUE99043.1;Parent=gene-NDY24_04170;Dbxref=NCBI_GP:UUE99043.1;Name=UUE99043.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_04170;product=hypothetical protein;protein_id=UUE99043.1;transl_table=11 CP098602.1 Genbank gene 944365 946023 . - . ID=gene-NDY24_04175;Name=NDY24_04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04175 CP098602.1 Protein Homology CDS 944365 946023 . - 0 ID=cds-UUE99044.1;Parent=gene-NDY24_04175;Dbxref=NCBI_GP:UUE99044.1;Name=UUE99044.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013704.2;locus_tag=NDY24_04175;product=site-specific DNA-methyltransferase;protein_id=UUE99044.1;transl_table=11 CP098602.1 Genbank gene 945974 946195 . - . ID=gene-NDY24_04180;Name=NDY24_04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04180 CP098602.1 Protein Homology CDS 945974 946195 . - 0 ID=cds-UUE99045.1;Parent=gene-NDY24_04180;Dbxref=NCBI_GP:UUE99045.1;Name=UUE99045.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013704.2;locus_tag=NDY24_04180;product=hypothetical protein;protein_id=UUE99045.1;transl_table=11 CP098602.1 Genbank gene 946140 946457 . - . ID=gene-NDY24_04185;Name=NDY24_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04185 CP098602.1 GeneMarkS-2+ CDS 946140 946457 . - 0 ID=cds-UUF00532.1;Parent=gene-NDY24_04185;Dbxref=NCBI_GP:UUF00532.1;Name=UUF00532.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_04185;product=hypothetical protein;protein_id=UUF00532.1;transl_table=11 CP098602.1 Genbank gene 946454 946624 . - . ID=gene-NDY24_04190;Name=NDY24_04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04190 CP098602.1 GeneMarkS-2+ CDS 946454 946624 . - 0 ID=cds-UUE99046.1;Parent=gene-NDY24_04190;Dbxref=NCBI_GP:UUE99046.1;Name=UUE99046.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_04190;product=hypothetical protein;protein_id=UUE99046.1;transl_table=11 CP098602.1 Genbank gene 946621 946947 . - . ID=gene-NDY24_04195;Name=NDY24_04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04195 CP098602.1 GeneMarkS-2+ CDS 946621 946947 . - 0 ID=cds-UUE99047.1;Parent=gene-NDY24_04195;Dbxref=NCBI_GP:UUE99047.1;Name=UUE99047.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_04195;product=hypothetical protein;protein_id=UUE99047.1;transl_table=11 CP098602.1 Genbank gene 946991 948370 . - . ID=gene-NDY24_04200;Name=NDY24_04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04200 CP098602.1 GeneMarkS-2+ CDS 946991 948370 . - 0 ID=cds-UUE99048.1;Parent=gene-NDY24_04200;Dbxref=NCBI_GP:UUE99048.1;Name=UUE99048.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_04200;product=hypothetical protein;protein_id=UUE99048.1;transl_table=11 CP098602.1 Genbank gene 948352 949914 . - . ID=gene-NDY24_04205;Name=NDY24_04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04205 CP098602.1 Protein Homology CDS 948352 949914 . - 0 ID=cds-UUE99049.1;Parent=gene-NDY24_04205;Dbxref=NCBI_GP:UUE99049.1;Name=UUE99049.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF016724.2;locus_tag=NDY24_04205;product=DEAD/DEAH box helicase family protein;protein_id=UUE99049.1;transl_table=11 CP098602.1 Genbank pseudogene 949908 950671 . - . ID=gene-NDY24_04210;Name=NDY24_04210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_04210;pseudo=true CP098602.1 Protein Homology CDS 949908 950671 . - 0 ID=cds-NDY24_04210;Parent=gene-NDY24_04210;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=NDY24_04210;product=IS5 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 950921 951229 . - . ID=gene-NDY24_04215;Name=NDY24_04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04215 CP098602.1 Protein Homology CDS 950921 951229 . - 0 ID=cds-UUE99050.1;Parent=gene-NDY24_04215;Dbxref=NCBI_GP:UUE99050.1;Name=UUE99050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303839.1;locus_tag=NDY24_04215;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=UUE99050.1;transl_table=11 CP098602.1 Genbank gene 951236 951499 . - . ID=gene-NDY24_04220;Name=NDY24_04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04220 CP098602.1 Protein Homology CDS 951236 951499 . - 0 ID=cds-UUE99051.1;Parent=gene-NDY24_04220;Dbxref=NCBI_GP:UUE99051.1;Name=UUE99051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003479855.1;locus_tag=NDY24_04220;product=hypothetical protein;protein_id=UUE99051.1;transl_table=11 CP098602.1 Genbank pseudogene 951602 953260 . + . ID=gene-NDY24_04225;Name=hsdR;gbkey=Gene;gene=hsdR;gene_biotype=pseudogene;locus_tag=NDY24_04225;pseudo=true CP098602.1 Protein Homology CDS 951602 953260 . + 0 ID=cds-NDY24_04225;Parent=gene-NDY24_04225;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;gene=hsdR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930478.1;locus_tag=NDY24_04225;product=type I restriction-modification system endonuclease;pseudo=true;transl_table=11 CP098602.1 Genbank gene 953347 954549 . + . ID=gene-NDY24_04230;Name=NDY24_04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04230 CP098602.1 Protein Homology CDS 953347 954549 . + 0 ID=cds-UUE99052.1;Parent=gene-NDY24_04230;Dbxref=NCBI_GP:UUE99052.1;Name=UUE99052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376182.1;locus_tag=NDY24_04230;product=Fic family protein;protein_id=UUE99052.1;transl_table=11 CP098602.1 Genbank gene 954645 955789 . + . ID=gene-NDY24_04235;Name=NDY24_04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04235 CP098602.1 Protein Homology CDS 954645 954888 . + 0 ID=cds-UUE99053.1;Parent=gene-NDY24_04235;Dbxref=NCBI_GP:UUE99053.1;Name=UUE99053.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=NDY24_04235;product=IS3 family transposase;protein_id=UUE99053.1;transl_table=11 CP098602.1 Protein Homology CDS 954888 955789 . + 2 ID=cds-UUE99053.1;Parent=gene-NDY24_04235;Dbxref=NCBI_GP:UUE99053.1;Name=UUE99053.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=NDY24_04235;product=IS3 family transposase;protein_id=UUE99053.1;transl_table=11 CP098602.1 Genbank gene 955786 957321 . + . ID=gene-NDY24_04240;Name=NDY24_04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04240 CP098602.1 Protein Homology CDS 955786 957321 . + 0 ID=cds-UUE99054.1;Parent=gene-NDY24_04240;Dbxref=NCBI_GP:UUE99054.1;Name=UUE99054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502302.1;locus_tag=NDY24_04240;product=SAM-dependent methyltransferase;protein_id=UUE99054.1;transl_table=11 CP098602.1 Genbank gene 957338 958654 . + . ID=gene-NDY24_04245;Name=NDY24_04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04245 CP098602.1 Protein Homology CDS 957338 958654 . + 0 ID=cds-UUE99055.1;Parent=gene-NDY24_04245;Dbxref=NCBI_GP:UUE99055.1;Name=UUE99055.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118502.1;locus_tag=NDY24_04245;product=restriction endonuclease subunit S;protein_id=UUE99055.1;transl_table=11 CP098602.1 Genbank gene 958696 960498 . + . ID=gene-NDY24_04250;Name=NDY24_04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04250 CP098602.1 Protein Homology CDS 958696 960498 . + 0 ID=cds-UUE99056.1;Parent=gene-NDY24_04250;Dbxref=NCBI_GP:UUE99056.1;Name=UUE99056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574150.1;locus_tag=NDY24_04250;product=DUF262 domain-containing protein;protein_id=UUE99056.1;transl_table=11 CP098602.1 Genbank pseudogene 960564 960858 . - . ID=gene-NDY24_04255;Name=NDY24_04255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_04255;pseudo=true CP098602.1 Protein Homology CDS 960564 960858 . - 0 ID=cds-NDY24_04255;Parent=gene-NDY24_04255;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154815.1;locus_tag=NDY24_04255;product=MarR family transcriptional regulator;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 960904 961380 . - . ID=gene-NDY24_04260;Name=NDY24_04260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_04260;pseudo=true CP098602.1 Protein Homology CDS 960904 961380 . - 0 ID=cds-NDY24_04260;Parent=gene-NDY24_04260;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089567.1;locus_tag=NDY24_04260;product=TetR/AcrR family transcriptional regulator;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 961382 961936 . + . ID=gene-NDY24_04265;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=pseudogene;locus_tag=NDY24_04265;pseudo=true CP098602.1 Protein Homology CDS 961382 961936 . + 0 ID=cds-NDY24_04265;Parent=gene-NDY24_04265;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154930.1;locus_tag=NDY24_04265;product=SDR family oxidoreductase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 961983 962279 . - . ID=gene-NDY24_04270;Name=NDY24_04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04270 CP098602.1 Protein Homology CDS 961983 962279 . - 0 ID=cds-UUE99057.1;Parent=gene-NDY24_04270;Dbxref=NCBI_GP:UUE99057.1;Name=UUE99057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017909631.1;locus_tag=NDY24_04270;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=UUE99057.1;transl_table=11 CP098602.1 Genbank gene 962281 962565 . - . ID=gene-NDY24_04275;Name=NDY24_04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04275 CP098602.1 Protein Homology CDS 962281 962565 . - 0 ID=cds-UUE99058.1;Parent=gene-NDY24_04275;Dbxref=NCBI_GP:UUE99058.1;Name=UUE99058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017909630.1;locus_tag=NDY24_04275;product=CopG family transcriptional regulator;protein_id=UUE99058.1;transl_table=11 CP098602.1 Genbank gene 962896 965559 . - . ID=gene-NDY24_04280;Name=NDY24_04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04280 CP098602.1 Protein Homology CDS 962896 965559 . - 0 ID=cds-UUE99059.1;Parent=gene-NDY24_04280;Dbxref=NCBI_GP:UUE99059.1;Name=UUE99059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439021.1;locus_tag=NDY24_04280;product=M1 family metallopeptidase;protein_id=UUE99059.1;transl_table=11 CP098602.1 Genbank gene 965734 967026 . - . ID=gene-NDY24_04285;Name=NDY24_04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04285 CP098602.1 Protein Homology CDS 965734 967026 . - 0 ID=cds-UUE99060.1;Parent=gene-NDY24_04285;Dbxref=NCBI_GP:UUE99060.1;Name=UUE99060.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903917.1;locus_tag=NDY24_04285;product=adenylosuccinate synthase;protein_id=UUE99060.1;transl_table=11 CP098602.1 Genbank gene 967454 967654 . - . ID=gene-NDY24_04290;Name=NDY24_04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04290 CP098602.1 Protein Homology CDS 967454 967654 . - 0 ID=cds-UUE99061.1;Parent=gene-NDY24_04290;Dbxref=NCBI_GP:UUE99061.1;Name=UUE99061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155761.1;locus_tag=NDY24_04290;product=DUF2065 family protein;protein_id=UUE99061.1;transl_table=11 CP098602.1 Genbank gene 967918 968781 . - . ID=gene-NDY24_04295;Name=NDY24_04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04295 CP098602.1 Protein Homology CDS 967918 968781 . - 0 ID=cds-UUE99062.1;Parent=gene-NDY24_04295;Dbxref=NCBI_GP:UUE99062.1;Name=UUE99062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449475.1;locus_tag=NDY24_04295;product=protease modulator HflC;protein_id=UUE99062.1;transl_table=11 CP098602.1 Genbank gene 968778 969920 . - . ID=gene-NDY24_04300;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=NDY24_04300 CP098602.1 Protein Homology CDS 968778 969920 . - 0 ID=cds-UUE99063.1;Parent=gene-NDY24_04300;Dbxref=NCBI_GP:UUE99063.1;Name=UUE99063.1;Ontology_term=GO:0045861,GO:0003674,GO:0030288;gbkey=CDS;gene=hflK;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=molecular_function|0003674||IEA;go_process=negative regulation of proteolysis|0045861||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019186090.1;locus_tag=NDY24_04300;product=FtsH protease activity modulator HflK;protein_id=UUE99063.1;transl_table=11 CP098602.1 Genbank gene 970317 970703 . - . ID=gene-NDY24_04305;Name=pilH;gbkey=Gene;gene=pilH;gene_biotype=protein_coding;locus_tag=NDY24_04305 CP098602.1 Protein Homology CDS 970317 970703 . - 0 ID=cds-UUE99064.1;Parent=gene-NDY24_04305;Dbxref=NCBI_GP:UUE99064.1;Name=UUE99064.1;gbkey=CDS;gene=pilH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036249.1;locus_tag=NDY24_04305;product=twitching motility response regulator PilH;protein_id=UUE99064.1;transl_table=11 CP098602.1 Genbank gene 971127 972023 . - . ID=gene-NDY24_04310;Name=NDY24_04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04310 CP098602.1 Protein Homology CDS 971127 972023 . - 0 ID=cds-UUE99065.1;Parent=gene-NDY24_04310;Dbxref=NCBI_GP:UUE99065.1;Name=UUE99065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113063.1;locus_tag=NDY24_04310;product=DnaJ domain-containing protein;protein_id=UUE99065.1;transl_table=11 CP098602.1 Genbank gene 972164 972640 . - . ID=gene-NDY24_04315;Name=NDY24_04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04315 CP098602.1 Protein Homology CDS 972164 972640 . - 0 ID=cds-UUE99066.1;Parent=gene-NDY24_04315;Dbxref=NCBI_GP:UUE99066.1;Name=UUE99066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155766.1;locus_tag=NDY24_04315;product=Hsp20/alpha crystallin family protein;protein_id=UUE99066.1;transl_table=11 CP098602.1 Genbank gene 972800 973282 . + . ID=gene-NDY24_04320;Name=NDY24_04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04320 CP098602.1 Protein Homology CDS 972800 973282 . + 0 ID=cds-UUE99067.1;Parent=gene-NDY24_04320;Dbxref=NCBI_GP:UUE99067.1;Name=UUE99067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155767.1;locus_tag=NDY24_04320;product=peroxiredoxin;protein_id=UUE99067.1;transl_table=11 CP098602.1 Genbank gene 973325 973885 . + . ID=gene-NDY24_04325;Name=NDY24_04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04325 CP098602.1 Protein Homology CDS 973325 973885 . + 0 ID=cds-UUE99068.1;Parent=gene-NDY24_04325;Dbxref=NCBI_GP:UUE99068.1;Name=UUE99068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005996162.1;locus_tag=NDY24_04325;product=ferritin-like domain-containing protein;protein_id=UUE99068.1;transl_table=11 CP098602.1 Genbank gene 974449 976872 . - . ID=gene-NDY24_04330;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=NDY24_04330 CP098602.1 Protein Homology CDS 974449 976872 . - 0 ID=cds-UUF00275.1;Parent=gene-NDY24_04330;Dbxref=NCBI_GP:UUF00275.1;Name=UUF00275.1;Ontology_term=GO:0009252,GO:0003824,GO:0009274;gbkey=CDS;gene=pbpC;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849843.1;locus_tag=NDY24_04330;product=penicillin-binding protein 1C;protein_id=UUF00275.1;transl_table=11 CP098602.1 Genbank gene 976977 977753 . - . ID=gene-NDY24_04335;Name=NDY24_04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04335 CP098602.1 Protein Homology CDS 976977 977753 . - 0 ID=cds-UUE99069.1;Parent=gene-NDY24_04335;Dbxref=NCBI_GP:UUE99069.1;Name=UUE99069.1;Ontology_term=GO:0071586,GO:0004222,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451902.1;locus_tag=NDY24_04335;product=CPBP family glutamic-type intramembrane protease;protein_id=UUE99069.1;transl_table=11 CP098602.1 Genbank pseudogene 977903 978851 . - . ID=gene-NDY24_04340;Name=NDY24_04340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_04340;pseudo=true CP098602.1 Protein Homology CDS 977903 978851 . - 0 ID=cds-NDY24_04340;Parent=gene-NDY24_04340;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016944837.1;locus_tag=NDY24_04340;product=glycerophosphodiester phosphodiesterase family protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 979017 981708 . - . ID=gene-NDY24_04345;Name=NDY24_04345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_04345;pseudo=true CP098602.1 Protein Homology CDS 979017 981708 . - 0 ID=cds-NDY24_04345;Parent=gene-NDY24_04345;Note=frameshifted;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005990584.1;locus_tag=NDY24_04345;product=TonB-dependent receptor;pseudo=true;transl_table=11 CP098602.1 Genbank gene 982390 982857 . - . ID=gene-NDY24_04350;Name=NDY24_04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04350 CP098602.1 Protein Homology CDS 982390 982857 . - 0 ID=cds-UUE99070.1;Parent=gene-NDY24_04350;Dbxref=NCBI_GP:UUE99070.1;Name=UUE99070.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913955.1;locus_tag=NDY24_04350;product=transposase;protein_id=UUE99070.1;transl_table=11 CP098602.1 Genbank pseudogene 983011 987911 . - . ID=gene-NDY24_04355;Name=NDY24_04355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_04355;pseudo=true CP098602.1 Protein Homology CDS 983011 987911 . - 0 ID=cds-NDY24_04355;Parent=gene-NDY24_04355;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571584.1;locus_tag=NDY24_04355;product=alpha-2-macroglobulin family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 988812 989783 . - . ID=gene-NDY24_04360;Name=NDY24_04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04360 CP098602.1 Protein Homology CDS 988812 989783 . - 0 ID=cds-UUF00276.1;Parent=gene-NDY24_04360;Dbxref=NCBI_GP:UUF00276.1;Name=UUF00276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089556.1;locus_tag=NDY24_04360;product=nucleoside hydrolase;protein_id=UUF00276.1;transl_table=11 CP098602.1 Genbank pseudogene 989890 992106 . - . ID=gene-NDY24_04365;Name=NDY24_04365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_04365;pseudo=true CP098602.1 Protein Homology CDS 989890 992106 . - 0 ID=cds-NDY24_04365;Parent=gene-NDY24_04365;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305008.1;locus_tag=NDY24_04365;product=TonB-dependent receptor;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 992428 993627 . - . ID=gene-NDY24_04370;Name=prpF;gbkey=Gene;gene=prpF;gene_biotype=pseudogene;locus_tag=NDY24_04370;pseudo=true CP098602.1 Protein Homology CDS 992428 993627 . - 0 ID=cds-NDY24_04370;Parent=gene-NDY24_04370;Note=internal stop;Ontology_term=GO:0019629;gbkey=CDS;gene=prpF;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379007.1;locus_tag=NDY24_04370;product=2-methylaconitate cis-trans isomerase PrpF;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 993692 996335 . - . ID=gene-NDY24_04375;Name=acnD;gbkey=Gene;gene=acnD;gene_biotype=pseudogene;locus_tag=NDY24_04375;pseudo=true CP098602.1 Protein Homology CDS 993692 996335 . - 0 ID=cds-NDY24_04375;Parent=gene-NDY24_04375;Note=frameshifted;Ontology_term=GO:0019629,GO:0047456;gbkey=CDS;gene=acnD;go_function=2-methylisocitrate dehydratase activity|0047456||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814297.1;locus_tag=NDY24_04375;product=Fe/S-dependent 2-methylisocitrate dehydratase AcnD;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 996554 997687 . - . ID=gene-NDY24_04380;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=pseudogene;locus_tag=NDY24_04380;pseudo=true CP098602.1 Protein Homology CDS 996554 997687 . - 0 ID=cds-NDY24_04380;Parent=gene-NDY24_04380;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0050440;gbkey=CDS;gene=prpC;go_function=2-methylcitrate synthase activity|0050440||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483896.1;locus_tag=NDY24_04380;product=2-methylcitrate synthase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 997778 998677 . - . ID=gene-NDY24_04385;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=NDY24_04385 CP098602.1 Protein Homology CDS 997778 998677 . - 0 ID=cds-UUE99071.1;Parent=gene-NDY24_04385;Dbxref=NCBI_GP:UUE99071.1;Name=UUE99071.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: protein motif:HMM:NF008455.0;locus_tag=NDY24_04385;product=methylisocitrate lyase;protein_id=UUE99071.1;transl_table=11 CP098602.1 Genbank pseudogene 998806 1000458 . + . ID=gene-NDY24_04390;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=pseudogene;locus_tag=NDY24_04390;pseudo=true CP098602.1 Protein Homology CDS 998806 1000458 . + 0 ID=cds-NDY24_04390;Parent=gene-NDY24_04390;Note=frameshifted;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849832.1;locus_tag=NDY24_04390;product=propionate catabolism operon regulatory protein PrpR;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1000668 1000994 . - . ID=gene-NDY24_04395;Name=NDY24_04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04395 CP098602.1 Protein Homology CDS 1000668 1000994 . - 0 ID=cds-UUE99072.1;Parent=gene-NDY24_04395;Dbxref=NCBI_GP:UUE99072.1;Name=UUE99072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089549.1;locus_tag=NDY24_04395;product=hypothetical protein;protein_id=UUE99072.1;transl_table=11 CP098602.1 Genbank gene 1001180 1001431 . + . ID=gene-NDY24_04400;Name=NDY24_04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04400 CP098602.1 Protein Homology CDS 1001180 1001431 . + 0 ID=cds-UUE99073.1;Parent=gene-NDY24_04400;Dbxref=NCBI_GP:UUE99073.1;Name=UUE99073.1;Ontology_term=GO:0008219;gbkey=CDS;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368416.1;locus_tag=NDY24_04400;product=type II toxin-antitoxin system prevent-host-death family antitoxin;protein_id=UUE99073.1;transl_table=11 CP098602.1 Genbank gene 1001428 1001685 . + . ID=gene-NDY24_04405;Name=NDY24_04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04405 CP098602.1 Protein Homology CDS 1001428 1001685 . + 0 ID=cds-UUE99074.1;Parent=gene-NDY24_04405;Dbxref=NCBI_GP:UUE99074.1;Name=UUE99074.1;Ontology_term=GO:0008219;gbkey=CDS;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118010.1;locus_tag=NDY24_04405;product=Txe/YoeB family addiction module toxin;protein_id=UUE99074.1;transl_table=11 CP098602.1 Genbank gene 1001882 1001956 . - . ID=gene-NDY24_04410;Name=NDY24_04410;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_04410 CP098602.1 tRNAscan-SE tRNA 1001882 1001956 . - . ID=rna-NDY24_04410;Parent=gene-NDY24_04410;anticodon=(pos:complement(1001922..1001924));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_04410;product=tRNA-Val CP098602.1 tRNAscan-SE exon 1001882 1001956 . - . ID=exon-NDY24_04410-1;Parent=rna-NDY24_04410;anticodon=(pos:complement(1001922..1001924));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_04410;product=tRNA-Val CP098602.1 Genbank gene 1002187 1002543 . - . ID=gene-NDY24_04415;Name=NDY24_04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04415 CP098602.1 Protein Homology CDS 1002187 1002543 . - 0 ID=cds-UUE99075.1;Parent=gene-NDY24_04415;Dbxref=NCBI_GP:UUE99075.1;Name=UUE99075.1;Ontology_term=GO:0035438;gbkey=CDS;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155784.1;locus_tag=NDY24_04415;product=PilZ domain-containing protein;protein_id=UUE99075.1;transl_table=11 CP098602.1 Genbank gene 1002540 1003499 . - . ID=gene-NDY24_04420;Name=NDY24_04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04420 CP098602.1 Protein Homology CDS 1002540 1003499 . - 0 ID=cds-UUE99076.1;Parent=gene-NDY24_04420;Dbxref=NCBI_GP:UUE99076.1;Name=UUE99076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007969013.1;locus_tag=NDY24_04420;product=DNA polymerase III subunit delta';protein_id=UUE99076.1;transl_table=11 CP098602.1 Genbank pseudogene 1003501 1004613 . - . ID=gene-NDY24_04425;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=pseudogene;locus_tag=NDY24_04425;pseudo=true CP098602.1 Protein Homology CDS 1003501 1004613 . - 0 ID=cds-NDY24_04425;Parent=gene-NDY24_04425;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160234.1;locus_tag=NDY24_04425;product=endolytic transglycosylase MltG;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1004629 1005984 . - . ID=gene-NDY24_04430;Name=NDY24_04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04430 CP098602.1 Protein Homology CDS 1004629 1005984 . - 0 ID=cds-UUE99077.1;Parent=gene-NDY24_04430;Dbxref=NCBI_GP:UUE99077.1;Name=UUE99077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160233.1;locus_tag=NDY24_04430;product=aminodeoxychorismate synthase component I;protein_id=UUE99077.1;transl_table=11 CP098602.1 Genbank pseudogene 1006155 1007389 . - . ID=gene-NDY24_04435;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=pseudogene;locus_tag=NDY24_04435;pseudo=true CP098602.1 Protein Homology CDS 1006155 1007389 . - 0 ID=cds-NDY24_04435;Parent=gene-NDY24_04435;Note=frameshifted;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302031.1;locus_tag=NDY24_04435;product=beta-ketoacyl-ACP synthase II;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1007530 1007769 . - . ID=gene-NDY24_04440;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=NDY24_04440 CP098602.1 Protein Homology CDS 1007530 1007769 . - 0 ID=cds-UUE99078.1;Parent=gene-NDY24_04440;Dbxref=NCBI_GP:UUE99078.1;Name=UUE99078.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013535667.1;locus_tag=NDY24_04440;product=acyl carrier protein;protein_id=UUE99078.1;transl_table=11 CP098602.1 Genbank gene 1007926 1008732 . - . ID=gene-NDY24_04445;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=NDY24_04445 CP098602.1 Protein Homology CDS 1007926 1008732 . - 0 ID=cds-UUE99079.1;Parent=gene-NDY24_04445;Dbxref=NCBI_GP:UUE99079.1;Name=UUE99079.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014161145.1;locus_tag=NDY24_04445;product=3-oxoacyl-ACP reductase FabG;protein_id=UUE99079.1;transl_table=11 CP098602.1 Genbank gene 1008757 1009701 . - . ID=gene-NDY24_04450;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=NDY24_04450 CP098602.1 Protein Homology CDS 1008757 1009701 . - 0 ID=cds-UUF00277.1;Parent=gene-NDY24_04450;Dbxref=NCBI_GP:UUF00277.1;Name=UUF00277.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304127.1;locus_tag=NDY24_04450;product=ACP S-malonyltransferase;protein_id=UUF00277.1;transl_table=11 CP098602.1 Genbank gene 1009806 1010588 . - . ID=gene-NDY24_04455;Name=NDY24_04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04455 CP098602.1 Protein Homology CDS 1009806 1010588 . - 0 ID=cds-UUF00278.1;Parent=gene-NDY24_04455;Dbxref=NCBI_GP:UUF00278.1;Name=UUF00278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902517.1;locus_tag=NDY24_04455;product=serine/threonine protein phosphatase;protein_id=UUF00278.1;transl_table=11 CP098602.1 Genbank pseudogene 1010653 1011627 . - . ID=gene-NDY24_04460;Name=NDY24_04460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_04460;pseudo=true CP098602.1 Protein Homology CDS 1010653 1011627 . - 0 ID=cds-NDY24_04460;Parent=gene-NDY24_04460;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502254.1;locus_tag=NDY24_04460;product=ketoacyl-ACP synthase III;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1011716 1011910 . - . ID=gene-NDY24_04465;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=NDY24_04465 CP098602.1 Protein Homology CDS 1011716 1011910 . - 0 ID=cds-UUE99080.1;Parent=gene-NDY24_04465;Dbxref=NCBI_GP:UUE99080.1;Name=UUE99080.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302036.1;locus_tag=NDY24_04465;product=50S ribosomal protein L32;protein_id=UUE99080.1;transl_table=11 CP098602.1 Genbank gene 1012008 1012517 . - . ID=gene-NDY24_04470;Name=NDY24_04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04470 CP098602.1 Protein Homology CDS 1012008 1012517 . - 0 ID=cds-UUF00279.1;Parent=gene-NDY24_04470;Dbxref=NCBI_GP:UUF00279.1;Name=UUF00279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814328.1;locus_tag=NDY24_04470;product=YceD family protein;protein_id=UUF00279.1;transl_table=11 CP098602.1 Genbank gene 1012626 1013201 . + . ID=gene-NDY24_04475;Name=NDY24_04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04475 CP098602.1 Protein Homology CDS 1012626 1013201 . + 0 ID=cds-UUE99081.1;Parent=gene-NDY24_04475;Dbxref=NCBI_GP:UUE99081.1;Name=UUE99081.1;Ontology_term=GO:0000917,GO:0030428;gbkey=CDS;go_component=cell septum|0030428||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159643.1;locus_tag=NDY24_04475;product=Maf family nucleotide pyrophosphatase;protein_id=UUE99081.1;transl_table=11 CP098602.1 Genbank gene 1013304 1015019 . - . ID=gene-NDY24_04480;Name=NDY24_04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04480 CP098602.1 Protein Homology CDS 1013304 1015019 . - 0 ID=cds-UUE99082.1;Parent=gene-NDY24_04480;Dbxref=NCBI_GP:UUE99082.1;Name=UUE99082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448419.1;locus_tag=NDY24_04480;product=hypothetical protein;protein_id=UUE99082.1;transl_table=11 CP098602.1 Genbank gene 1015128 1016978 . - . ID=gene-NDY24_04485;Name=NDY24_04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04485 CP098602.1 Protein Homology CDS 1015128 1016978 . - 0 ID=cds-UUE99083.1;Parent=gene-NDY24_04485;Dbxref=NCBI_GP:UUE99083.1;Name=UUE99083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448420.1;locus_tag=NDY24_04485;product=glycosyltransferase family 39 protein;protein_id=UUE99083.1;transl_table=11 CP098602.1 Genbank gene 1017015 1017968 . + . ID=gene-NDY24_04490;Name=NDY24_04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04490 CP098602.1 Protein Homology CDS 1017015 1017968 . + 0 ID=cds-UUE99084.1;Parent=gene-NDY24_04490;Dbxref=NCBI_GP:UUE99084.1;Name=UUE99084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502249.1;locus_tag=NDY24_04490;product=AAA family ATPase;protein_id=UUE99084.1;transl_table=11 CP098602.1 Genbank gene 1017974 1018930 . + . ID=gene-NDY24_04495;Name=NDY24_04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04495 CP098602.1 Protein Homology CDS 1017974 1018930 . + 0 ID=cds-UUE99085.1;Parent=gene-NDY24_04495;Dbxref=NCBI_GP:UUE99085.1;Name=UUE99085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850007.1;locus_tag=NDY24_04495;product=DUF58 domain-containing protein;protein_id=UUE99085.1;transl_table=11 CP098602.1 Genbank pseudogene 1018923 1020872 . + . ID=gene-NDY24_04500;Name=NDY24_04500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_04500;pseudo=true CP098602.1 Protein Homology CDS 1018923 1020872 . + 0 ID=cds-NDY24_04500;Parent=gene-NDY24_04500;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346625.1;locus_tag=NDY24_04500;product=DUF3488 and transglutaminase-like domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1020896 1021408 . + . ID=gene-NDY24_04505;Name=NDY24_04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04505 CP098602.1 Protein Homology CDS 1020896 1021408 . + 0 ID=cds-UUF00280.1;Parent=gene-NDY24_04505;Dbxref=NCBI_GP:UUF00280.1;Name=UUF00280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017355152.1;locus_tag=NDY24_04505;product=Slp family lipoprotein;protein_id=UUF00280.1;transl_table=11 CP098602.1 Genbank gene 1021533 1021883 . - . ID=gene-NDY24_04510;Name=NDY24_04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04510 CP098602.1 Protein Homology CDS 1021533 1021883 . - 0 ID=cds-UUE99086.1;Parent=gene-NDY24_04510;Dbxref=NCBI_GP:UUE99086.1;Name=UUE99086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155799.1;locus_tag=NDY24_04510;product=histidine triad nucleotide-binding protein;protein_id=UUE99086.1;transl_table=11 CP098602.1 Genbank pseudogene 1021982 1022595 . - . ID=gene-NDY24_04515;Name=recR;gbkey=Gene;gene=recR;gene_biotype=pseudogene;locus_tag=NDY24_04515;pseudo=true CP098602.1 Protein Homology CDS 1021982 1022595 . - 0 ID=cds-NDY24_04515;Parent=gene-NDY24_04515;Note=frameshifted;Ontology_term=GO:0006281,GO:0006310;gbkey=CDS;gene=recR;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084887.1;locus_tag=NDY24_04515;product=recombination mediator RecR;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1022673 1022993 . - . ID=gene-NDY24_04520;Name=NDY24_04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04520 CP098602.1 Protein Homology CDS 1022673 1022993 . - 0 ID=cds-UUE99087.1;Parent=gene-NDY24_04520;Dbxref=NCBI_GP:UUE99087.1;Name=UUE99087.1;Ontology_term=GO:0008150,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346622.1;locus_tag=NDY24_04520;product=YbaB/EbfC family nucleoid-associated protein;protein_id=UUE99087.1;transl_table=11 CP098602.1 Genbank gene 1023000 1025060 . - . ID=gene-NDY24_04525;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=NDY24_04525 CP098602.1 Protein Homology CDS 1023000 1025060 . - 0 ID=cds-UUE99088.1;Parent=gene-NDY24_04525;Dbxref=NCBI_GP:UUE99088.1;Name=UUE99088.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155800.1;locus_tag=NDY24_04525;product=DNA polymerase III subunit gamma/tau;protein_id=UUE99088.1;transl_table=11 CP098602.1 Genbank gene 1025294 1025386 . + . ID=gene-NDY24_04530;Name=NDY24_04530;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_04530 CP098602.1 tRNAscan-SE tRNA 1025294 1025386 . + . ID=rna-NDY24_04530;Parent=gene-NDY24_04530;anticodon=(pos:1025328..1025330);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_04530;product=tRNA-Ser CP098602.1 tRNAscan-SE exon 1025294 1025386 . + . ID=exon-NDY24_04530-1;Parent=rna-NDY24_04530;anticodon=(pos:1025328..1025330);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_04530;product=tRNA-Ser CP098602.1 Genbank gene 1025998 1026348 . + . ID=gene-NDY24_04535;Name=NDY24_04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04535 CP098602.1 GeneMarkS-2+ CDS 1025998 1026348 . + 0 ID=cds-UUE99089.1;Parent=gene-NDY24_04535;Dbxref=NCBI_GP:UUE99089.1;Name=UUE99089.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_04535;product=hypothetical protein;protein_id=UUE99089.1;transl_table=11 CP098602.1 Genbank gene 1026359 1026955 . + . ID=gene-NDY24_04540;Name=NDY24_04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04540 CP098602.1 Protein Homology CDS 1026359 1026955 . + 0 ID=cds-UUF00281.1;Parent=gene-NDY24_04540;Dbxref=NCBI_GP:UUF00281.1;Name=UUF00281.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=NDY24_04540;product=integrase;protein_id=UUF00281.1;transl_table=11 CP098602.1 Genbank gene 1027709 1028140 . - . ID=gene-NDY24_04545;Name=NDY24_04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04545 CP098602.1 GeneMarkS-2+ CDS 1027709 1028140 . - 0 ID=cds-UUE99090.1;Parent=gene-NDY24_04545;Dbxref=NCBI_GP:UUE99090.1;Name=UUE99090.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_04545;product=hypothetical protein;protein_id=UUE99090.1;transl_table=11 CP098602.1 Genbank pseudogene 1028913 1031425 . - . ID=gene-NDY24_04550;Name=NDY24_04550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_04550;pseudo=true CP098602.1 Protein Homology CDS 1028913 1031425 . - 0 ID=cds-NDY24_04550;Parent=gene-NDY24_04550;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269460.1;locus_tag=NDY24_04550;product=RHS repeat protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1031506 1032613 . - . ID=gene-NDY24_04555;Name=NDY24_04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04555 CP098602.1 Protein Homology CDS 1032357 1032613 . - 0 ID=cds-UUE99091.1;Parent=gene-NDY24_04555;Dbxref=NCBI_GP:UUE99091.1;Name=UUE99091.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611839.1;locus_tag=NDY24_04555;product=IS3 family transposase;protein_id=UUE99091.1;transl_table=11 CP098602.1 Protein Homology CDS 1031506 1032358 . - 1 ID=cds-UUE99091.1;Parent=gene-NDY24_04555;Dbxref=NCBI_GP:UUE99091.1;Name=UUE99091.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611839.1;locus_tag=NDY24_04555;product=IS3 family transposase;protein_id=UUE99091.1;transl_table=11 CP098602.1 Genbank gene 1032732 1033271 . + . ID=gene-NDY24_04560;Name=NDY24_04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04560 CP098602.1 Protein Homology CDS 1032732 1033271 . + 0 ID=cds-UUF00282.1;Parent=gene-NDY24_04560;Dbxref=NCBI_GP:UUF00282.1;Name=UUF00282.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024676.2;locus_tag=NDY24_04560;product=WYL domain-containing protein;protein_id=UUF00282.1;transl_table=11 CP098602.1 Genbank gene 1033461 1033667 . - . ID=gene-NDY24_04565;Name=NDY24_04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04565 CP098602.1 Protein Homology CDS 1033461 1033667 . - 0 ID=cds-UUE99092.1;Parent=gene-NDY24_04565;Dbxref=NCBI_GP:UUE99092.1;Name=UUE99092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448437.1;locus_tag=NDY24_04565;product=helix-turn-helix domain-containing protein;protein_id=UUE99092.1;transl_table=11 CP098602.1 Genbank pseudogene 1033912 1034676 . + . ID=gene-NDY24_04570;Name=NDY24_04570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_04570;pseudo=true CP098602.1 Protein Homology CDS 1033912 1034676 . + 0 ID=cds-NDY24_04570;Parent=gene-NDY24_04570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363214.1;locus_tag=NDY24_04570;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 1034722 1035032 . + . ID=gene-NDY24_04575;Name=NDY24_04575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_04575;pseudo=true CP098602.1 Protein Homology CDS 1034722 1035032 . + 0 ID=cds-NDY24_04575;Parent=gene-NDY24_04575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438629.1;locus_tag=NDY24_04575;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1035029 1035409 . + . ID=gene-NDY24_04580;Name=NDY24_04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04580 CP098602.1 Protein Homology CDS 1035029 1035409 . + 0 ID=cds-UUE99093.1;Parent=gene-NDY24_04580;Dbxref=NCBI_GP:UUE99093.1;Name=UUE99093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154975.1;locus_tag=NDY24_04580;product=hypothetical protein;protein_id=UUE99093.1;transl_table=11 CP098602.1 Genbank gene 1036074 1036274 . + . ID=gene-NDY24_04585;Name=NDY24_04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04585 CP098602.1 GeneMarkS-2+ CDS 1036074 1036274 . + 0 ID=cds-UUE99094.1;Parent=gene-NDY24_04585;Dbxref=NCBI_GP:UUE99094.1;Name=UUE99094.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_04585;product=hypothetical protein;protein_id=UUE99094.1;transl_table=11 CP098602.1 Genbank gene 1036509 1037237 . + . ID=gene-NDY24_04590;Name=NDY24_04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04590 CP098602.1 GeneMarkS-2+ CDS 1036509 1037237 . + 0 ID=cds-UUE99095.1;Parent=gene-NDY24_04590;Dbxref=NCBI_GP:UUE99095.1;Name=UUE99095.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_04590;product=hypothetical protein;protein_id=UUE99095.1;transl_table=11 CP098602.1 Genbank gene 1037602 1038681 . + . ID=gene-NDY24_04595;Name=NDY24_04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04595 CP098602.1 GeneMarkS-2+ CDS 1037602 1038681 . + 0 ID=cds-UUE99096.1;Parent=gene-NDY24_04595;Dbxref=NCBI_GP:UUE99096.1;Name=UUE99096.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_04595;product=hypothetical protein;protein_id=UUE99096.1;transl_table=11 CP098602.1 Genbank gene 1038918 1039547 . - . ID=gene-NDY24_04600;Name=NDY24_04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04600 CP098602.1 Protein Homology CDS 1038918 1039547 . - 0 ID=cds-UUE99097.1;Parent=gene-NDY24_04600;Dbxref=NCBI_GP:UUE99097.1;Name=UUE99097.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020387.2;locus_tag=NDY24_04600;product=RES domain-containing protein;protein_id=UUE99097.1;transl_table=11 CP098602.1 Genbank gene 1039975 1040352 . - . ID=gene-NDY24_04605;Name=NDY24_04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04605 CP098602.1 GeneMarkS-2+ CDS 1039975 1040352 . - 0 ID=cds-UUE99098.1;Parent=gene-NDY24_04605;Dbxref=NCBI_GP:UUE99098.1;Name=UUE99098.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_04605;product=hypothetical protein;protein_id=UUE99098.1;transl_table=11 CP098602.1 Genbank pseudogene 1040563 1040914 . - . ID=gene-NDY24_04610;Name=NDY24_04610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_04610;pseudo=true CP098602.1 Protein Homology CDS 1040563 1040914 . - 0 ID=cds-NDY24_04610;Parent=gene-NDY24_04610;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159187.1;locus_tag=NDY24_04610;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1041294 1041390 . + . ID=gene-NDY24_04615;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=NDY24_04615 CP098602.1 cmsearch SRP_RNA 1041294 1041390 . + . ID=rna-NDY24_04615;Parent=gene-NDY24_04615;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_04615;product=signal recognition particle sRNA small type CP098602.1 cmsearch exon 1041294 1041390 . + . ID=exon-NDY24_04615-1;Parent=rna-NDY24_04615;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_04615;product=signal recognition particle sRNA small type CP098602.1 Genbank gene 1041466 1041915 . - . ID=gene-NDY24_04620;Name=NDY24_04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04620 CP098602.1 Protein Homology CDS 1041466 1041915 . - 0 ID=cds-UUE99099.1;Parent=gene-NDY24_04620;Dbxref=NCBI_GP:UUE99099.1;Name=UUE99099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502242.1;locus_tag=NDY24_04620;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=UUE99099.1;transl_table=11 CP098602.1 Genbank gene 1041912 1042157 . - . ID=gene-NDY24_04625;Name=NDY24_04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04625 CP098602.1 Protein Homology CDS 1041912 1042157 . - 0 ID=cds-UUE99100.1;Parent=gene-NDY24_04625;Dbxref=NCBI_GP:UUE99100.1;Name=UUE99100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257909.1;locus_tag=NDY24_04625;product=MoaD/ThiS family protein;protein_id=UUE99100.1;transl_table=11 CP098602.1 Genbank gene 1042154 1042651 . - . ID=gene-NDY24_04630;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=NDY24_04630 CP098602.1 Protein Homology CDS 1042154 1042651 . - 0 ID=cds-UUE99101.1;Parent=gene-NDY24_04630;Dbxref=NCBI_GP:UUE99101.1;Name=UUE99101.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaC;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159642.1;locus_tag=NDY24_04630;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=UUE99101.1;transl_table=11 CP098602.1 Genbank gene 1042728 1043762 . - . ID=gene-NDY24_04635;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=NDY24_04635 CP098602.1 Protein Homology CDS 1042728 1043762 . - 0 ID=cds-UUE99102.1;Parent=gene-NDY24_04635;Dbxref=NCBI_GP:UUE99102.1;Name=UUE99102.1;Ontology_term=GO:0006777,GO:0051539;gbkey=CDS;gene=moaA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814367.1;locus_tag=NDY24_04635;product=GTP 3'%2C8-cyclase MoaA;protein_id=UUE99102.1;transl_table=11 CP098602.1 Genbank gene 1043762 1044511 . - . ID=gene-NDY24_04640;Name=NDY24_04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04640 CP098602.1 Protein Homology CDS 1043762 1044511 . - 0 ID=cds-UUE99103.1;Parent=gene-NDY24_04640;Dbxref=NCBI_GP:UUE99103.1;Name=UUE99103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158132.1;locus_tag=NDY24_04640;product=MBL fold metallo-hydrolase;protein_id=UUE99103.1;transl_table=11 CP098602.1 Genbank gene 1044511 1045260 . - . ID=gene-NDY24_04645;Name=NDY24_04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04645 CP098602.1 Protein Homology CDS 1044511 1045260 . - 0 ID=cds-UUE99104.1;Parent=gene-NDY24_04645;Dbxref=NCBI_GP:UUE99104.1;Name=UUE99104.1;Ontology_term=GO:0016773;gbkey=CDS;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305198.1;locus_tag=NDY24_04645;product=3-deoxy-D-manno-octulosonic acid kinase;protein_id=UUE99104.1;transl_table=11 CP098602.1 Genbank gene 1045281 1046330 . + . ID=gene-NDY24_04650;Name=NDY24_04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04650 CP098602.1 Protein Homology CDS 1045281 1046330 . + 0 ID=cds-UUE99105.1;Parent=gene-NDY24_04650;Dbxref=NCBI_GP:UUE99105.1;Name=UUE99105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050699.1;locus_tag=NDY24_04650;product=glycosyltransferase family 9 protein;protein_id=UUE99105.1;transl_table=11 CP098602.1 Genbank gene 1046436 1046840 . - . ID=gene-NDY24_04655;Name=NDY24_04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04655 CP098602.1 Protein Homology CDS 1046436 1046840 . - 0 ID=cds-UUE99106.1;Parent=gene-NDY24_04655;Dbxref=NCBI_GP:UUE99106.1;Name=UUE99106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158129.1;locus_tag=NDY24_04655;product=DUF6165 family protein;protein_id=UUE99106.1;transl_table=11 CP098602.1 Genbank gene 1046940 1047028 . - . ID=gene-NDY24_04660;Name=NDY24_04660;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_04660 CP098602.1 tRNAscan-SE tRNA 1046940 1047028 . - . ID=rna-NDY24_04660;Parent=gene-NDY24_04660;anticodon=(pos:complement(1046992..1046994));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_04660;product=tRNA-Ser CP098602.1 tRNAscan-SE exon 1046940 1047028 . - . ID=exon-NDY24_04660-1;Parent=rna-NDY24_04660;anticodon=(pos:complement(1046992..1046994));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_04660;product=tRNA-Ser CP098602.1 Genbank gene 1047226 1047930 . + . ID=gene-NDY24_04665;Name=NDY24_04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04665 CP098602.1 Protein Homology CDS 1047226 1047930 . + 0 ID=cds-UUE99107.1;Parent=gene-NDY24_04665;Dbxref=NCBI_GP:UUE99107.1;Name=UUE99107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483822.1;locus_tag=NDY24_04665;product=protein phosphatase 2C domain-containing protein;protein_id=UUE99107.1;transl_table=11 CP098602.1 Genbank gene 1047927 1048661 . - . ID=gene-NDY24_04670;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=NDY24_04670 CP098602.1 Protein Homology CDS 1047927 1048661 . - 0 ID=cds-UUE99108.1;Parent=gene-NDY24_04670;Dbxref=NCBI_GP:UUE99108.1;Name=UUE99108.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158127.1;locus_tag=NDY24_04670;product=DNA polymerase III subunit epsilon;protein_id=UUE99108.1;transl_table=11 CP098602.1 Genbank gene 1048674 1049126 . - . ID=gene-NDY24_04675;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=NDY24_04675 CP098602.1 Protein Homology CDS 1048674 1049126 . - 0 ID=cds-UUE99109.1;Parent=gene-NDY24_04675;Dbxref=NCBI_GP:UUE99109.1;Name=UUE99109.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450176.1;locus_tag=NDY24_04675;product=ribonuclease HI;protein_id=UUE99109.1;transl_table=11 CP098602.1 Genbank gene 1049158 1049814 . - . ID=gene-NDY24_04680;Name=NDY24_04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04680 CP098602.1 Protein Homology CDS 1049158 1049814 . - 0 ID=cds-UUE99110.1;Parent=gene-NDY24_04680;Dbxref=NCBI_GP:UUE99110.1;Name=UUE99110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346590.1;locus_tag=NDY24_04680;product=hypothetical protein;protein_id=UUE99110.1;transl_table=11 CP098602.1 Genbank gene 1049827 1050594 . + . ID=gene-NDY24_04685;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=NDY24_04685 CP098602.1 Protein Homology CDS 1049827 1050594 . + 0 ID=cds-UUE99111.1;Parent=gene-NDY24_04685;Dbxref=NCBI_GP:UUE99111.1;Name=UUE99111.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902543.1;locus_tag=NDY24_04685;product=hydroxyacylglutathione hydrolase;protein_id=UUE99111.1;transl_table=11 CP098602.1 Genbank gene 1050591 1051769 . + . ID=gene-NDY24_04690;Name=NDY24_04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04690 CP098602.1 Protein Homology CDS 1050591 1051769 . + 0 ID=cds-UUE99112.1;Parent=gene-NDY24_04690;Dbxref=NCBI_GP:UUE99112.1;Name=UUE99112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112895.1;locus_tag=NDY24_04690;product=transglycosylase SLT domain-containing protein;protein_id=UUE99112.1;transl_table=11 CP098602.1 Genbank gene 1052217 1054187 . - . ID=gene-NDY24_04695;Name=NDY24_04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04695 CP098602.1 Protein Homology CDS 1052217 1054187 . - 0 ID=cds-UUE99113.1;Parent=gene-NDY24_04695;Dbxref=NCBI_GP:UUE99113.1;Name=UUE99113.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920425.1;locus_tag=NDY24_04695;product=peptidyl-prolyl cis-trans isomerase;protein_id=UUE99113.1;transl_table=11 CP098602.1 Genbank gene 1054353 1054429 . - . ID=gene-NDY24_04700;Name=NDY24_04700;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_04700 CP098602.1 tRNAscan-SE tRNA 1054353 1054429 . - . ID=rna-NDY24_04700;Parent=gene-NDY24_04700;anticodon=(pos:complement(1054393..1054395));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_04700;product=tRNA-Asp CP098602.1 tRNAscan-SE exon 1054353 1054429 . - . ID=exon-NDY24_04700-1;Parent=rna-NDY24_04700;anticodon=(pos:complement(1054393..1054395));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_04700;product=tRNA-Asp CP098602.1 Genbank gene 1054524 1054600 . - . ID=gene-NDY24_04705;Name=NDY24_04705;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_04705 CP098602.1 tRNAscan-SE tRNA 1054524 1054600 . - . ID=rna-NDY24_04705;Parent=gene-NDY24_04705;anticodon=(pos:complement(1054564..1054566));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_04705;product=tRNA-Asp CP098602.1 tRNAscan-SE exon 1054524 1054600 . - . ID=exon-NDY24_04705-1;Parent=rna-NDY24_04705;anticodon=(pos:complement(1054564..1054566));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_04705;product=tRNA-Asp CP098602.1 Genbank gene 1054629 1054703 . - . ID=gene-NDY24_04710;Name=NDY24_04710;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_04710 CP098602.1 tRNAscan-SE tRNA 1054629 1054703 . - . ID=rna-NDY24_04710;Parent=gene-NDY24_04710;anticodon=(pos:complement(1054669..1054671));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_04710;product=tRNA-Val CP098602.1 tRNAscan-SE exon 1054629 1054703 . - . ID=exon-NDY24_04710-1;Parent=rna-NDY24_04710;anticodon=(pos:complement(1054669..1054671));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_04710;product=tRNA-Val CP098602.1 Genbank gene 1054715 1054987 . - . ID=gene-NDY24_04715;Name=NDY24_04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04715 CP098602.1 Protein Homology CDS 1054715 1054987 . - 0 ID=cds-UUE99114.1;Parent=gene-NDY24_04715;Dbxref=NCBI_GP:UUE99114.1;Name=UUE99114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904732.1;locus_tag=NDY24_04715;product=HU family DNA-binding protein;protein_id=UUE99114.1;transl_table=11 CP098602.1 Genbank pseudogene 1055205 1057675 . - . ID=gene-NDY24_04720;Name=lon;gbkey=Gene;gene=lon;gene_biotype=pseudogene;locus_tag=NDY24_04720;pseudo=true CP098602.1 Protein Homology CDS 1055205 1057675 . - 0 ID=cds-NDY24_04720;Parent=gene-NDY24_04720;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451748.1;locus_tag=NDY24_04720;product=endopeptidase La;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1057820 1059106 . - . ID=gene-NDY24_04725;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=NDY24_04725 CP098602.1 Protein Homology CDS 1057820 1059106 . - 0 ID=cds-UUE99115.1;Parent=gene-NDY24_04725;Dbxref=NCBI_GP:UUE99115.1;Name=UUE99115.1;Ontology_term=GO:0005524,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451747.1;locus_tag=NDY24_04725;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=UUE99115.1;transl_table=11 CP098602.1 Genbank gene 1059231 1059857 . - . ID=gene-NDY24_04730;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=NDY24_04730 CP098602.1 Protein Homology CDS 1059231 1059857 . - 0 ID=cds-UUE99116.1;Parent=gene-NDY24_04730;Dbxref=NCBI_GP:UUE99116.1;Name=UUE99116.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806026.1;locus_tag=NDY24_04730;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=UUE99116.1;transl_table=11 CP098602.1 Genbank gene 1059981 1061276 . - . ID=gene-NDY24_04735;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=NDY24_04735 CP098602.1 Protein Homology CDS 1059981 1061276 . - 0 ID=cds-UUE99117.1;Parent=gene-NDY24_04735;Dbxref=NCBI_GP:UUE99117.1;Name=UUE99117.1;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019659529.1;locus_tag=NDY24_04735;product=trigger factor;protein_id=UUE99117.1;transl_table=11 CP098602.1 Genbank gene 1061480 1061564 . - . ID=gene-NDY24_04740;Name=NDY24_04740;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_04740 CP098602.1 tRNAscan-SE tRNA 1061480 1061564 . - . ID=rna-NDY24_04740;Parent=gene-NDY24_04740;anticodon=(pos:complement(1061528..1061530));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_04740;product=tRNA-Leu CP098602.1 tRNAscan-SE exon 1061480 1061564 . - . ID=exon-NDY24_04740-1;Parent=rna-NDY24_04740;anticodon=(pos:complement(1061528..1061530));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_04740;product=tRNA-Leu CP098602.1 Genbank gene 1061832 1063127 . + . ID=gene-NDY24_04745;Name=NDY24_04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04745 CP098602.1 Protein Homology CDS 1061832 1063127 . + 0 ID=cds-UUE99118.1;Parent=gene-NDY24_04745;Dbxref=NCBI_GP:UUE99118.1;Name=UUE99118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451744.1;locus_tag=NDY24_04745;product=ATP-binding protein;protein_id=UUE99118.1;transl_table=11 CP098602.1 Genbank gene 1063132 1063578 . - . ID=gene-NDY24_04750;Name=NDY24_04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04750 CP098602.1 Protein Homology CDS 1063132 1063578 . - 0 ID=cds-UUE99119.1;Parent=gene-NDY24_04750;Dbxref=NCBI_GP:UUE99119.1;Name=UUE99119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451743.1;locus_tag=NDY24_04750;product=hypothetical protein;protein_id=UUE99119.1;transl_table=11 CP098602.1 Genbank gene 1063818 1063893 . - . ID=gene-NDY24_04755;Name=NDY24_04755;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_04755 CP098602.1 tRNAscan-SE tRNA 1063818 1063893 . - . ID=rna-NDY24_04755;Parent=gene-NDY24_04755;anticodon=(pos:complement(1063858..1063860));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_04755;product=tRNA-Lys CP098602.1 tRNAscan-SE exon 1063818 1063893 . - . ID=exon-NDY24_04755-1;Parent=rna-NDY24_04755;anticodon=(pos:complement(1063858..1063860));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_04755;product=tRNA-Lys CP098602.1 Genbank gene 1063978 1064054 . - . ID=gene-NDY24_04760;Name=NDY24_04760;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_04760 CP098602.1 tRNAscan-SE tRNA 1063978 1064054 . - . ID=rna-NDY24_04760;Parent=gene-NDY24_04760;anticodon=(pos:complement(1064018..1064020));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_04760;product=tRNA-His CP098602.1 tRNAscan-SE exon 1063978 1064054 . - . ID=exon-NDY24_04760-1;Parent=rna-NDY24_04760;anticodon=(pos:complement(1064018..1064020));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_04760;product=tRNA-His CP098602.1 Genbank gene 1064087 1064163 . - . ID=gene-NDY24_04765;Name=NDY24_04765;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_04765 CP098602.1 tRNAscan-SE tRNA 1064087 1064163 . - . ID=rna-NDY24_04765;Parent=gene-NDY24_04765;anticodon=(pos:complement(1064127..1064129));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_04765;product=tRNA-Arg CP098602.1 tRNAscan-SE exon 1064087 1064163 . - . ID=exon-NDY24_04765-1;Parent=rna-NDY24_04765;anticodon=(pos:complement(1064127..1064129));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_04765;product=tRNA-Arg CP098602.1 Genbank gene 1064206 1064282 . - . ID=gene-NDY24_04770;Name=NDY24_04770;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_04770 CP098602.1 tRNAscan-SE tRNA 1064206 1064282 . - . ID=rna-NDY24_04770;Parent=gene-NDY24_04770;anticodon=(pos:complement(1064246..1064248));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_04770;product=tRNA-Pro CP098602.1 tRNAscan-SE exon 1064206 1064282 . - . ID=exon-NDY24_04770-1;Parent=rna-NDY24_04770;anticodon=(pos:complement(1064246..1064248));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_04770;product=tRNA-Pro CP098602.1 Genbank gene 1064435 1065196 . + . ID=gene-NDY24_04775;Name=NDY24_04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04775 CP098602.1 Protein Homology CDS 1064435 1065196 . + 0 ID=cds-UUE99120.1;Parent=gene-NDY24_04775;Dbxref=NCBI_GP:UUE99120.1;Name=UUE99120.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024221.2;locus_tag=NDY24_04775;product=Bax inhibitor-1/YccA family protein;protein_id=UUE99120.1;transl_table=11 CP098602.1 Genbank gene 1065314 1066321 . - . ID=gene-NDY24_04780;Name=NDY24_04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04780 CP098602.1 Protein Homology CDS 1065314 1066321 . - 0 ID=cds-UUE99121.1;Parent=gene-NDY24_04780;Dbxref=NCBI_GP:UUE99121.1;Name=UUE99121.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852046.1;locus_tag=NDY24_04780;product=isocitrate dehydrogenase;protein_id=UUE99121.1;transl_table=11 CP098602.1 Genbank gene 1066581 1066976 . - . ID=gene-NDY24_04785;Name=NDY24_04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04785 CP098602.1 Protein Homology CDS 1066581 1066976 . - 0 ID=cds-UUE99122.1;Parent=gene-NDY24_04785;Dbxref=NCBI_GP:UUE99122.1;Name=UUE99122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483760.1;locus_tag=NDY24_04785;product=carboxymuconolactone decarboxylase family protein;protein_id=UUE99122.1;transl_table=11 CP098602.1 Genbank gene 1066973 1067281 . - . ID=gene-NDY24_04790;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=NDY24_04790 CP098602.1 Protein Homology CDS 1066973 1067281 . - 0 ID=cds-UUE99123.1;Parent=gene-NDY24_04790;Dbxref=NCBI_GP:UUE99123.1;Name=UUE99123.1;Ontology_term=GO:0015036;gbkey=CDS;gene=grxC;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927845.1;locus_tag=NDY24_04790;product=glutaredoxin 3;protein_id=UUE99123.1;transl_table=11 CP098602.1 Genbank gene 1067430 1069076 . + . ID=gene-NDY24_04795;Name=NDY24_04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04795 CP098602.1 Protein Homology CDS 1067430 1069076 . + 0 ID=cds-UUE99124.1;Parent=gene-NDY24_04795;Dbxref=NCBI_GP:UUE99124.1;Name=UUE99124.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483755.1;locus_tag=NDY24_04795;product=M48 family metalloprotease;protein_id=UUE99124.1;transl_table=11 CP098602.1 Genbank gene 1069272 1069961 . + . ID=gene-NDY24_04800;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=NDY24_04800 CP098602.1 Protein Homology CDS 1069272 1069961 . + 0 ID=cds-UUE99125.1;Parent=gene-NDY24_04800;Dbxref=NCBI_GP:UUE99125.1;Name=UUE99125.1;Ontology_term=GO:0000160,GO:0006355,GO:0006796,GO:0000156,GO:0003700;gbkey=CDS;gene=phoB;go_function=phosphorelay response regulator activity|0000156||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of transcription%2C DNA-templated|0006355||IEA,phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451737.1;locus_tag=NDY24_04800;product=phosphate regulon transcriptional regulator PhoB;protein_id=UUE99125.1;transl_table=11 CP098602.1 Genbank gene 1070041 1071369 . + . ID=gene-NDY24_04805;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=NDY24_04805 CP098602.1 Protein Homology CDS 1070041 1071369 . + 0 ID=cds-UUE99126.1;Parent=gene-NDY24_04805;Dbxref=NCBI_GP:UUE99126.1;Name=UUE99126.1;Ontology_term=GO:0000160,GO:0006796,GO:0000155;gbkey=CDS;gene=phoR;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158112.1;locus_tag=NDY24_04805;product=phosphate regulon sensor histidine kinase PhoR;protein_id=UUE99126.1;transl_table=11 CP098602.1 Genbank gene 1071491 1073593 . + . ID=gene-NDY24_04810;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=NDY24_04810 CP098602.1 Protein Homology CDS 1071491 1073593 . + 0 ID=cds-UUF00283.1;Parent=gene-NDY24_04810;Dbxref=NCBI_GP:UUF00283.1;Name=UUF00283.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506857.1;locus_tag=NDY24_04810;product=polyphosphate kinase 1;protein_id=UUF00283.1;transl_table=11 CP098602.1 Genbank gene 1073759 1075285 . + . ID=gene-NDY24_04815;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=NDY24_04815 CP098602.1 Protein Homology CDS 1073759 1075285 . + 0 ID=cds-UUE99127.1;Parent=gene-NDY24_04815;Dbxref=NCBI_GP:UUE99127.1;Name=UUE99127.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036174.1;locus_tag=NDY24_04815;product=exopolyphosphatase;protein_id=UUE99127.1;transl_table=11 CP098602.1 Genbank gene 1075502 1076638 . + . ID=gene-NDY24_04820;Name=NDY24_04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04820 CP098602.1 Protein Homology CDS 1075502 1076638 . + 0 ID=cds-UUF00284.1;Parent=gene-NDY24_04820;Dbxref=NCBI_GP:UUF00284.1;Name=UUF00284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922250.1;locus_tag=NDY24_04820;product=glycosyltransferase family 1 protein;protein_id=UUF00284.1;transl_table=11 CP098602.1 Genbank gene 1076619 1077161 . + . ID=gene-NDY24_04825;Name=NDY24_04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04825 CP098602.1 Protein Homology CDS 1076619 1077161 . + 0 ID=cds-UUE99128.1;Parent=gene-NDY24_04825;Dbxref=NCBI_GP:UUE99128.1;Name=UUE99128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409295.1;locus_tag=NDY24_04825;product=phosphatase PAP2 family protein;protein_id=UUE99128.1;transl_table=11 CP098602.1 Genbank gene 1077486 1078229 . + . ID=gene-NDY24_04830;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=NDY24_04830 CP098602.1 Protein Homology CDS 1077486 1078229 . + 0 ID=cds-UUE99129.1;Parent=gene-NDY24_04830;Dbxref=NCBI_GP:UUE99129.1;Name=UUE99129.1;Ontology_term=GO:0009245,GO:0008758;gbkey=CDS;gene=lpxH;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439087.1;locus_tag=NDY24_04830;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=UUE99129.1;transl_table=11 CP098602.1 Genbank gene 1078261 1078680 . - . ID=gene-NDY24_04835;Name=NDY24_04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04835 CP098602.1 Protein Homology CDS 1078261 1078680 . - 0 ID=cds-UUE99130.1;Parent=gene-NDY24_04835;Dbxref=NCBI_GP:UUE99130.1;Name=UUE99130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571624.1;locus_tag=NDY24_04835;product=hypothetical protein;protein_id=UUE99130.1;transl_table=11 CP098602.1 Genbank gene 1078817 1080070 . - . ID=gene-NDY24_04840;Name=NDY24_04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04840 CP098602.1 Protein Homology CDS 1078817 1080070 . - 0 ID=cds-UUE99131.1;Parent=gene-NDY24_04840;Dbxref=NCBI_GP:UUE99131.1;Name=UUE99131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506851.1;locus_tag=NDY24_04840;product=zinc-dependent metalloprotease;protein_id=UUE99131.1;transl_table=11 CP098602.1 Genbank gene 1080258 1081061 . - . ID=gene-NDY24_04845;Name=NDY24_04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04845 CP098602.1 Protein Homology CDS 1080258 1081061 . - 0 ID=cds-UUF00285.1;Parent=gene-NDY24_04845;Dbxref=NCBI_GP:UUF00285.1;Name=UUF00285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806608.1;locus_tag=NDY24_04845;product=ferritin-like domain-containing protein;protein_id=UUF00285.1;transl_table=11 CP098602.1 Genbank gene 1081123 1082589 . - . ID=gene-NDY24_04850;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=NDY24_04850 CP098602.1 Protein Homology CDS 1081123 1082589 . - 0 ID=cds-UUE99132.1;Parent=gene-NDY24_04850;Dbxref=NCBI_GP:UUE99132.1;Name=UUE99132.1;Ontology_term=GO:0009152,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806604.1;locus_tag=NDY24_04850;product=amidophosphoribosyltransferase;protein_id=UUE99132.1;transl_table=11 CP098602.1 Genbank gene 1082620 1083366 . - . ID=gene-NDY24_04855;Name=NDY24_04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04855 CP098602.1 Protein Homology CDS 1082620 1083366 . - 0 ID=cds-UUE99133.1;Parent=gene-NDY24_04855;Dbxref=NCBI_GP:UUE99133.1;Name=UUE99133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301875.1;locus_tag=NDY24_04855;product=CvpA family protein;protein_id=UUE99133.1;transl_table=11 CP098602.1 Genbank gene 1083597 1084664 . - . ID=gene-NDY24_04860;Name=NDY24_04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04860 CP098602.1 Protein Homology CDS 1083597 1084664 . - 0 ID=cds-UUE99134.1;Parent=gene-NDY24_04860;Dbxref=NCBI_GP:UUE99134.1;Name=UUE99134.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301876.1;locus_tag=NDY24_04860;product=SPOR domain-containing protein;protein_id=UUE99134.1;transl_table=11 CP098602.1 Genbank gene 1084724 1086016 . - . ID=gene-NDY24_04865;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=NDY24_04865 CP098602.1 Protein Homology CDS 1084724 1086016 . - 0 ID=cds-UUE99135.1;Parent=gene-NDY24_04865;Dbxref=NCBI_GP:UUE99135.1;Name=UUE99135.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449396.1;locus_tag=NDY24_04865;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=UUE99135.1;transl_table=11 CP098602.1 Genbank gene 1086153 1086719 . - . ID=gene-NDY24_04870;Name=NDY24_04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04870 CP098602.1 Protein Homology CDS 1086153 1086719 . - 0 ID=cds-UUE99136.1;Parent=gene-NDY24_04870;Dbxref=NCBI_GP:UUE99136.1;Name=UUE99136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036163.1;locus_tag=NDY24_04870;product=hypothetical protein;protein_id=UUE99136.1;transl_table=11 CP098602.1 Genbank gene 1086750 1087394 . - . ID=gene-NDY24_04875;Name=NDY24_04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04875 CP098602.1 Protein Homology CDS 1086750 1087394 . - 0 ID=cds-UUE99137.1;Parent=gene-NDY24_04875;Dbxref=NCBI_GP:UUE99137.1;Name=UUE99137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017910762.1;locus_tag=NDY24_04875;product=histidine phosphatase family protein;protein_id=UUE99137.1;transl_table=11 CP098602.1 Genbank gene 1087486 1089570 . - . ID=gene-NDY24_04880;Name=NDY24_04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04880 CP098602.1 Protein Homology CDS 1087486 1089570 . - 0 ID=cds-UUE99138.1;Parent=gene-NDY24_04880;Dbxref=NCBI_GP:UUE99138.1;Name=UUE99138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156243.1;locus_tag=NDY24_04880;product=S46 family peptidase;protein_id=UUE99138.1;transl_table=11 CP098602.1 Genbank gene 1089813 1091894 . - . ID=gene-NDY24_04885;Name=NDY24_04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04885 CP098602.1 Protein Homology CDS 1089813 1091894 . - 0 ID=cds-UUE99139.1;Parent=gene-NDY24_04885;Dbxref=NCBI_GP:UUE99139.1;Name=UUE99139.1;Ontology_term=GO:0004629;gbkey=CDS;go_function=phospholipase C activity|0004629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506843.1;locus_tag=NDY24_04885;product=phospholipase C%2C phosphocholine-specific;protein_id=UUE99139.1;transl_table=11 CP098602.1 Genbank gene 1092000 1094435 . + . ID=gene-NDY24_04890;Name=NDY24_04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04890 CP098602.1 Protein Homology CDS 1092000 1094435 . + 0 ID=cds-UUE99140.1;Parent=gene-NDY24_04890;Dbxref=NCBI_GP:UUE99140.1;Name=UUE99140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158532.1;locus_tag=NDY24_04890;product=TonB-dependent receptor;protein_id=UUE99140.1;transl_table=11 CP098602.1 Genbank gene 1094708 1095742 . + . ID=gene-NDY24_04895;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=NDY24_04895 CP098602.1 Protein Homology CDS 1094708 1095742 . + 0 ID=cds-UUE99141.1;Parent=gene-NDY24_04895;Dbxref=NCBI_GP:UUE99141.1;Name=UUE99141.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017164734.1;locus_tag=NDY24_04895;product=L-threonine 3-dehydrogenase;protein_id=UUE99141.1;transl_table=11 CP098602.1 Genbank gene 1096363 1097079 . - . ID=gene-NDY24_04900;Name=NDY24_04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04900 CP098602.1 Protein Homology CDS 1096363 1097079 . - 0 ID=cds-UUE99142.1;Parent=gene-NDY24_04900;Dbxref=NCBI_GP:UUE99142.1;Name=UUE99142.1;Ontology_term=GO:0015288;gbkey=CDS;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159554.1;locus_tag=NDY24_04900;product=TorF family putative porin;protein_id=UUE99142.1;transl_table=11 CP098602.1 Genbank gene 1097377 1098408 . - . ID=gene-NDY24_04905;Name=NDY24_04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04905 CP098602.1 Protein Homology CDS 1097377 1098408 . - 0 ID=cds-UUE99143.1;Parent=gene-NDY24_04905;Dbxref=NCBI_GP:UUE99143.1;Name=UUE99143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902217.1;locus_tag=NDY24_04905;product=sulfate/molybdate ABC transporter ATP-binding protein;protein_id=UUE99143.1;transl_table=11 CP098602.1 Genbank gene 1098416 1099369 . - . ID=gene-NDY24_04910;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=NDY24_04910 CP098602.1 Protein Homology CDS 1098416 1099369 . - 0 ID=cds-UUE99144.1;Parent=gene-NDY24_04910;Dbxref=NCBI_GP:UUE99144.1;Name=UUE99144.1;Ontology_term=GO:0008272,GO:0015419,GO:0005887,GO:0055052;gbkey=CDS;gene=cysW;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158531.1;locus_tag=NDY24_04910;product=sulfate ABC transporter permease subunit CysW;protein_id=UUE99144.1;transl_table=11 CP098602.1 Genbank gene 1099366 1100226 . - . ID=gene-NDY24_04915;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=NDY24_04915 CP098602.1 Protein Homology CDS 1099366 1100226 . - 0 ID=cds-UUE99145.1;Parent=gene-NDY24_04915;Dbxref=NCBI_GP:UUE99145.1;Name=UUE99145.1;Ontology_term=GO:0008272,GO:0015419,GO:0005887,GO:0055052;gbkey=CDS;gene=cysT;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036155.1;locus_tag=NDY24_04915;product=sulfate ABC transporter permease subunit CysT;protein_id=UUE99145.1;transl_table=11 CP098602.1 Genbank gene 1100230 1101330 . - . ID=gene-NDY24_04920;Name=NDY24_04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04920 CP098602.1 Protein Homology CDS 1100230 1101330 . - 0 ID=cds-UUE99146.1;Parent=gene-NDY24_04920;Dbxref=NCBI_GP:UUE99146.1;Name=UUE99146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089499.1;locus_tag=NDY24_04920;product=sulfate ABC transporter substrate-binding protein;protein_id=UUE99146.1;transl_table=11 CP098602.1 Genbank gene 1101421 1102629 . + . ID=gene-NDY24_04925;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=NDY24_04925 CP098602.1 Protein Homology CDS 1101421 1102629 . + 0 ID=cds-UUE99147.1;Parent=gene-NDY24_04925;Dbxref=NCBI_GP:UUE99147.1;Name=UUE99147.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814591.1;locus_tag=NDY24_04925;product=glycine C-acetyltransferase;protein_id=UUE99147.1;transl_table=11 CP098602.1 Genbank gene 1102629 1103018 . + . ID=gene-NDY24_04930;Name=NDY24_04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04930 CP098602.1 Protein Homology CDS 1102629 1103018 . + 0 ID=cds-UUE99148.1;Parent=gene-NDY24_04930;Dbxref=NCBI_GP:UUE99148.1;Name=UUE99148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368604.1;locus_tag=NDY24_04930;product=HNH endonuclease;protein_id=UUE99148.1;transl_table=11 CP098602.1 Genbank gene 1102972 1103823 . - . ID=gene-NDY24_04935;Name=NDY24_04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04935 CP098602.1 Protein Homology CDS 1102972 1103823 . - 0 ID=cds-UUE99149.1;Parent=gene-NDY24_04935;Dbxref=NCBI_GP:UUE99149.1;Name=UUE99149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156232.1;locus_tag=NDY24_04935;product=rRNA pseudouridine synthase;protein_id=UUE99149.1;transl_table=11 CP098602.1 Genbank gene 1103843 1104361 . - . ID=gene-NDY24_04940;Name=NDY24_04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04940 CP098602.1 Protein Homology CDS 1103843 1104361 . - 0 ID=cds-UUE99150.1;Parent=gene-NDY24_04940;Dbxref=NCBI_GP:UUE99150.1;Name=UUE99150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156231.1;locus_tag=NDY24_04940;product=hypothetical protein;protein_id=UUE99150.1;transl_table=11 CP098602.1 Genbank gene 1104552 1105649 . - . ID=gene-NDY24_04945;Name=NDY24_04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04945 CP098602.1 Protein Homology CDS 1104552 1105649 . - 0 ID=cds-UUF00286.1;Parent=gene-NDY24_04945;Dbxref=NCBI_GP:UUF00286.1;Name=UUF00286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171142.1;locus_tag=NDY24_04945;product=OmpA family protein;protein_id=UUF00286.1;transl_table=11 CP098602.1 Genbank gene 1106061 1107083 . + . ID=gene-NDY24_04950;Name=NDY24_04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04950 CP098602.1 Protein Homology CDS 1106061 1107083 . + 0 ID=cds-UUE99151.1;Parent=gene-NDY24_04950;Dbxref=NCBI_GP:UUE99151.1;Name=UUE99151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005998400.1;locus_tag=NDY24_04950;product=zinc-binding alcohol dehydrogenase family protein;protein_id=UUE99151.1;transl_table=11 CP098602.1 Genbank gene 1107243 1109282 . + . ID=gene-NDY24_04955;Name=NDY24_04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04955 CP098602.1 Protein Homology CDS 1107243 1109282 . + 0 ID=cds-UUE99152.1;Parent=gene-NDY24_04955;Dbxref=NCBI_GP:UUE99152.1;Name=UUE99152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300705.1;locus_tag=NDY24_04955;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=UUE99152.1;transl_table=11 CP098602.1 Genbank gene 1109469 1109546 . - . ID=gene-NDY24_04960;Name=NDY24_04960;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_04960 CP098602.1 cmsearch ncRNA 1109469 1109546 . - . ID=rna-NDY24_04960;Parent=gene-NDY24_04960;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_04960;product=sX9 sRNA CP098602.1 cmsearch exon 1109469 1109546 . - . ID=exon-NDY24_04960-1;Parent=rna-NDY24_04960;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_04960;product=sX9 sRNA CP098602.1 Genbank gene 1109737 1111047 . + . ID=gene-NDY24_04965;Name=NDY24_04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04965 CP098602.1 Protein Homology CDS 1109737 1111047 . + 0 ID=cds-UUF00287.1;Parent=gene-NDY24_04965;Dbxref=NCBI_GP:UUF00287.1;Name=UUF00287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904175.1;locus_tag=NDY24_04965;product=MFS transporter;protein_id=UUF00287.1;transl_table=11 CP098602.1 Genbank gene 1111862 1112323 . + . ID=gene-NDY24_04970;Name=NDY24_04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04970 CP098602.1 Protein Homology CDS 1111862 1112323 . + 0 ID=cds-UUE99153.1;Parent=gene-NDY24_04970;Dbxref=NCBI_GP:UUE99153.1;Name=UUE99153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003470606.1;locus_tag=NDY24_04970;product=cell wall hydrolase;protein_id=UUE99153.1;transl_table=11 CP098602.1 Genbank gene 1112390 1113004 . + . ID=gene-NDY24_04975;Name=NDY24_04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04975 CP098602.1 Protein Homology CDS 1112390 1113004 . + 0 ID=cds-UUE99154.1;Parent=gene-NDY24_04975;Dbxref=NCBI_GP:UUE99154.1;Name=UUE99154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486641.1;locus_tag=NDY24_04975;product=glutathione binding-like protein;protein_id=UUE99154.1;transl_table=11 CP098602.1 Genbank gene 1113178 1114164 . - . ID=gene-NDY24_04980;Name=NDY24_04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04980 CP098602.1 Protein Homology CDS 1113178 1114164 . - 0 ID=cds-UUE99155.1;Parent=gene-NDY24_04980;Dbxref=NCBI_GP:UUE99155.1;Name=UUE99155.1;Ontology_term=GO:0006108,GO:0016615;gbkey=CDS;go_function=malate dehydrogenase activity|0016615||IEA;go_process=malate metabolic process|0006108||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439107.1;locus_tag=NDY24_04980;product=malate dehydrogenase;protein_id=UUE99155.1;transl_table=11 CP098602.1 Genbank gene 1114281 1114775 . - . ID=gene-NDY24_04985;Name=NDY24_04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04985 CP098602.1 Protein Homology CDS 1114281 1114775 . - 0 ID=cds-UUE99156.1;Parent=gene-NDY24_04985;Dbxref=NCBI_GP:UUE99156.1;Name=UUE99156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993409.1;locus_tag=NDY24_04985;product=peptidylprolyl isomerase;protein_id=UUE99156.1;transl_table=11 CP098602.1 Genbank gene 1114994 1116823 . + . ID=gene-NDY24_04990;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=NDY24_04990 CP098602.1 Protein Homology CDS 1114994 1116823 . + 0 ID=cds-UUE99157.1;Parent=gene-NDY24_04990;Dbxref=NCBI_GP:UUE99157.1;Name=UUE99157.1;Ontology_term=GO:0006412,GO:0006950,GO:0005525;gbkey=CDS;gene=typA;go_function=GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904579.1;locus_tag=NDY24_04990;product=translational GTPase TypA;protein_id=UUE99157.1;transl_table=11 CP098602.1 Genbank gene 1116896 1117315 . + . ID=gene-NDY24_04995;Name=NDY24_04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_04995 CP098602.1 Protein Homology CDS 1116896 1117315 . + 0 ID=cds-UUF00288.1;Parent=gene-NDY24_04995;Dbxref=NCBI_GP:UUF00288.1;Name=UUF00288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161510.1;locus_tag=NDY24_04995;product=DUF2127 domain-containing protein;protein_id=UUF00288.1;transl_table=11 CP098602.1 Genbank gene 1117425 1119041 . + . ID=gene-NDY24_05000;Name=NDY24_05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05000 CP098602.1 Protein Homology CDS 1117425 1119041 . + 0 ID=cds-UUF00289.1;Parent=gene-NDY24_05000;Dbxref=NCBI_GP:UUF00289.1;Name=UUF00289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450653.1;locus_tag=NDY24_05000;product=amidase;protein_id=UUF00289.1;transl_table=11 CP098602.1 Genbank gene 1119031 1120158 . - . ID=gene-NDY24_05005;Name=NDY24_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05005 CP098602.1 Protein Homology CDS 1119031 1120158 . - 0 ID=cds-UUE99158.1;Parent=gene-NDY24_05005;Dbxref=NCBI_GP:UUE99158.1;Name=UUE99158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156225.1;locus_tag=NDY24_05005;product=mechanosensitive ion channel family protein;protein_id=UUE99158.1;transl_table=11 CP098602.1 Genbank gene 1120245 1121636 . - . ID=gene-NDY24_05010;Name=NDY24_05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05010 CP098602.1 Protein Homology CDS 1120245 1121636 . - 0 ID=cds-UUE99159.1;Parent=gene-NDY24_05010;Dbxref=NCBI_GP:UUE99159.1;Name=UUE99159.1;Ontology_term=GO:0009423,GO:0003849;gbkey=CDS;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450651.1;locus_tag=NDY24_05010;product=3-deoxy-7-phosphoheptulonate synthase class II;protein_id=UUE99159.1;transl_table=11 CP098602.1 Genbank gene 1121685 1122203 . - . ID=gene-NDY24_05015;Name=NDY24_05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05015 CP098602.1 Protein Homology CDS 1121685 1122203 . - 0 ID=cds-UUE99160.1;Parent=gene-NDY24_05015;Dbxref=NCBI_GP:UUE99160.1;Name=UUE99160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036135.1;locus_tag=NDY24_05015;product=disulfide bond formation protein B;protein_id=UUE99160.1;transl_table=11 CP098602.1 Genbank gene 1122516 1122899 . - . ID=gene-NDY24_05020;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=NDY24_05020 CP098602.1 Protein Homology CDS 1122516 1122899 . - 0 ID=cds-UUE99161.1;Parent=gene-NDY24_05020;Dbxref=NCBI_GP:UUE99161.1;Name=UUE99161.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010340456.1;locus_tag=NDY24_05020;product=50S ribosomal protein L17;protein_id=UUE99161.1;transl_table=11 CP098602.1 Genbank gene 1123081 1124079 . - . ID=gene-NDY24_05025;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=NDY24_05025 CP098602.1 Protein Homology CDS 1123081 1124079 . - 0 ID=cds-UUE99162.1;Parent=gene-NDY24_05025;Dbxref=NCBI_GP:UUE99162.1;Name=UUE99162.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;gene=rpoA;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=transcription%2C DNA-templated|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852431.1;locus_tag=NDY24_05025;product=DNA-directed RNA polymerase subunit alpha;protein_id=UUE99162.1;transl_table=11 CP098602.1 Genbank gene 1124133 1124759 . - . ID=gene-NDY24_05030;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=NDY24_05030 CP098602.1 Protein Homology CDS 1124133 1124759 . - 0 ID=cds-UUE99163.1;Parent=gene-NDY24_05030;Dbxref=NCBI_GP:UUE99163.1;Name=UUE99163.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004145446.1;locus_tag=NDY24_05030;product=30S ribosomal protein S4;protein_id=UUE99163.1;transl_table=11 CP098602.1 Genbank gene 1124774 1125166 . - . ID=gene-NDY24_05035;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=NDY24_05035 CP098602.1 Protein Homology CDS 1124774 1125166 . - 0 ID=cds-UUE99164.1;Parent=gene-NDY24_05035;Dbxref=NCBI_GP:UUE99164.1;Name=UUE99164.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004996786.1;locus_tag=NDY24_05035;product=30S ribosomal protein S11;protein_id=UUE99164.1;transl_table=11 CP098602.1 Genbank gene 1125177 1125533 . - . ID=gene-NDY24_05040;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=NDY24_05040 CP098602.1 Protein Homology CDS 1125177 1125533 . - 0 ID=cds-UUE99165.1;Parent=gene-NDY24_05040;Dbxref=NCBI_GP:UUE99165.1;Name=UUE99165.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004154500.1;locus_tag=NDY24_05040;product=30S ribosomal protein S13;protein_id=UUE99165.1;transl_table=11 CP098602.1 Genbank gene 1125868 1127235 . - . ID=gene-NDY24_05045;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=NDY24_05045 CP098602.1 Protein Homology CDS 1125868 1127235 . - 0 ID=cds-UUE99166.1;Parent=gene-NDY24_05045;Dbxref=NCBI_GP:UUE99166.1;Name=UUE99166.1;Ontology_term=GO:0043952,GO:0015450,GO:0005887;gbkey=CDS;gene=secY;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486674.1;locus_tag=NDY24_05045;product=preprotein translocase subunit SecY;protein_id=UUE99166.1;transl_table=11 CP098602.1 Genbank gene 1127243 1127686 . - . ID=gene-NDY24_05050;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=NDY24_05050 CP098602.1 Protein Homology CDS 1127243 1127686 . - 0 ID=cds-UUE99167.1;Parent=gene-NDY24_05050;Dbxref=NCBI_GP:UUE99167.1;Name=UUE99167.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486676.1;locus_tag=NDY24_05050;product=50S ribosomal protein L15;protein_id=UUE99167.1;transl_table=11 CP098602.1 Genbank gene 1127691 1127882 . - . ID=gene-NDY24_05055;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=NDY24_05055 CP098602.1 Protein Homology CDS 1127691 1127882 . - 0 ID=cds-UUE99168.1;Parent=gene-NDY24_05055;Dbxref=NCBI_GP:UUE99168.1;Name=UUE99168.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486678.1;locus_tag=NDY24_05055;product=50S ribosomal protein L30;protein_id=UUE99168.1;transl_table=11 CP098602.1 Genbank gene 1127875 1128417 . - . ID=gene-NDY24_05060;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=NDY24_05060 CP098602.1 Protein Homology CDS 1127875 1128417 . - 0 ID=cds-UUE99169.1;Parent=gene-NDY24_05060;Dbxref=NCBI_GP:UUE99169.1;Name=UUE99169.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004145411.1;locus_tag=NDY24_05060;product=30S ribosomal protein S5;protein_id=UUE99169.1;transl_table=11 CP098602.1 Genbank gene 1128577 1128936 . - . ID=gene-NDY24_05065;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=NDY24_05065 CP098602.1 Protein Homology CDS 1128577 1128936 . - 0 ID=cds-UUE99170.1;Parent=gene-NDY24_05065;Dbxref=NCBI_GP:UUE99170.1;Name=UUE99170.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811659.1;locus_tag=NDY24_05065;product=50S ribosomal protein L18;protein_id=UUE99170.1;transl_table=11 CP098602.1 Genbank gene 1129028 1129555 . - . ID=gene-NDY24_05070;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=NDY24_05070 CP098602.1 Protein Homology CDS 1129028 1129555 . - 0 ID=cds-UUE99171.1;Parent=gene-NDY24_05070;Dbxref=NCBI_GP:UUE99171.1;Name=UUE99171.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450642.1;locus_tag=NDY24_05070;product=50S ribosomal protein L6;protein_id=UUE99171.1;transl_table=11 CP098602.1 Genbank gene 1129571 1129969 . - . ID=gene-NDY24_05075;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=NDY24_05075 CP098602.1 Protein Homology CDS 1129571 1129969 . - 0 ID=cds-UUE99172.1;Parent=gene-NDY24_05075;Dbxref=NCBI_GP:UUE99172.1;Name=UUE99172.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005932726.1;locus_tag=NDY24_05075;product=30S ribosomal protein S8;protein_id=UUE99172.1;transl_table=11 CP098602.1 Genbank gene 1130174 1130479 . - . ID=gene-NDY24_05080;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=NDY24_05080 CP098602.1 Protein Homology CDS 1130174 1130479 . - 0 ID=cds-UUE99173.1;Parent=gene-NDY24_05080;Dbxref=NCBI_GP:UUE99173.1;Name=UUE99173.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917137.1;locus_tag=NDY24_05080;product=30S ribosomal protein S14;protein_id=UUE99173.1;transl_table=11 CP098602.1 Genbank gene 1130498 1131040 . - . ID=gene-NDY24_05085;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=NDY24_05085 CP098602.1 Protein Homology CDS 1130498 1131040 . - 0 ID=cds-UUE99174.1;Parent=gene-NDY24_05085;Dbxref=NCBI_GP:UUE99174.1;Name=UUE99174.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486694.1;locus_tag=NDY24_05085;product=50S ribosomal protein L5;protein_id=UUE99174.1;transl_table=11 CP098602.1 Genbank gene 1131037 1131369 . - . ID=gene-NDY24_05090;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=NDY24_05090 CP098602.1 Protein Homology CDS 1131037 1131369 . - 0 ID=cds-UUE99175.1;Parent=gene-NDY24_05090;Dbxref=NCBI_GP:UUE99175.1;Name=UUE99175.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260025.1;locus_tag=NDY24_05090;product=50S ribosomal protein L24;protein_id=UUE99175.1;transl_table=11 CP098602.1 Genbank gene 1131385 1131753 . - . ID=gene-NDY24_05095;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=NDY24_05095 CP098602.1 Protein Homology CDS 1131385 1131753 . - 0 ID=cds-UUE99176.1;Parent=gene-NDY24_05095;Dbxref=NCBI_GP:UUE99176.1;Name=UUE99176.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=NDY24_05095;product=50S ribosomal protein L14;protein_id=UUE99176.1;transl_table=11 CP098602.1 Genbank gene 1131768 1132037 . - . ID=gene-NDY24_05100;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=NDY24_05100 CP098602.1 Protein Homology CDS 1131768 1132037 . - 0 ID=cds-UUE99177.1;Parent=gene-NDY24_05100;Dbxref=NCBI_GP:UUE99177.1;Name=UUE99177.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993374.1;locus_tag=NDY24_05100;product=30S ribosomal protein S17;protein_id=UUE99177.1;transl_table=11 CP098602.1 Genbank gene 1132049 1132234 . - . ID=gene-NDY24_05105;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=NDY24_05105 CP098602.1 Protein Homology CDS 1132049 1132234 . - 0 ID=cds-UUE99178.1;Parent=gene-NDY24_05105;Dbxref=NCBI_GP:UUE99178.1;Name=UUE99178.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050639.1;locus_tag=NDY24_05105;product=50S ribosomal protein L29;protein_id=UUE99178.1;transl_table=11 CP098602.1 Genbank gene 1132234 1132647 . - . ID=gene-NDY24_05110;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=NDY24_05110 CP098602.1 Protein Homology CDS 1132234 1132647 . - 0 ID=cds-UUE99179.1;Parent=gene-NDY24_05110;Dbxref=NCBI_GP:UUE99179.1;Name=UUE99179.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003479591.1;locus_tag=NDY24_05110;product=50S ribosomal protein L16;protein_id=UUE99179.1;transl_table=11 CP098602.1 Genbank gene 1132653 1133387 . - . ID=gene-NDY24_05115;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=NDY24_05115 CP098602.1 Protein Homology CDS 1132653 1133387 . - 0 ID=cds-UUE99180.1;Parent=gene-NDY24_05115;Dbxref=NCBI_GP:UUE99180.1;Name=UUE99180.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811684.1;locus_tag=NDY24_05115;product=30S ribosomal protein S3;protein_id=UUE99180.1;transl_table=11 CP098602.1 Genbank gene 1133405 1133740 . - . ID=gene-NDY24_05120;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=NDY24_05120 CP098602.1 Protein Homology CDS 1133405 1133740 . - 0 ID=cds-UUE99181.1;Parent=gene-NDY24_05120;Dbxref=NCBI_GP:UUE99181.1;Name=UUE99181.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486710.1;locus_tag=NDY24_05120;product=50S ribosomal protein L22;protein_id=UUE99181.1;transl_table=11 CP098602.1 Genbank gene 1133753 1134022 . - . ID=gene-NDY24_05125;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=NDY24_05125 CP098602.1 Protein Homology CDS 1133753 1134022 . - 0 ID=cds-UUE99182.1;Parent=gene-NDY24_05125;Dbxref=NCBI_GP:UUE99182.1;Name=UUE99182.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010341594.1;locus_tag=NDY24_05125;product=30S ribosomal protein S19;protein_id=UUE99182.1;transl_table=11 CP098602.1 Genbank gene 1134029 1134856 . - . ID=gene-NDY24_05130;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=NDY24_05130 CP098602.1 Protein Homology CDS 1134029 1134856 . - 0 ID=cds-UUE99183.1;Parent=gene-NDY24_05130;Dbxref=NCBI_GP:UUE99183.1;Name=UUE99183.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009607340.1;locus_tag=NDY24_05130;product=50S ribosomal protein L2;protein_id=UUE99183.1;transl_table=11 CP098602.1 Genbank gene 1134867 1135166 . - . ID=gene-NDY24_05135;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=NDY24_05135 CP098602.1 Protein Homology CDS 1134867 1135166 . - 0 ID=cds-UUE99184.1;Parent=gene-NDY24_05135;Dbxref=NCBI_GP:UUE99184.1;Name=UUE99184.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004145338.1;locus_tag=NDY24_05135;product=50S ribosomal protein L23;protein_id=UUE99184.1;transl_table=11 CP098602.1 Genbank gene 1135163 1135768 . - . ID=gene-NDY24_05140;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=NDY24_05140 CP098602.1 Protein Homology CDS 1135163 1135768 . - 0 ID=cds-UUE99185.1;Parent=gene-NDY24_05140;Dbxref=NCBI_GP:UUE99185.1;Name=UUE99185.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371054.1;locus_tag=NDY24_05140;product=50S ribosomal protein L4;protein_id=UUE99185.1;transl_table=11 CP098602.1 Genbank gene 1135781 1136431 . - . ID=gene-NDY24_05145;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=NDY24_05145 CP098602.1 Protein Homology CDS 1135781 1136431 . - 0 ID=cds-UUE99186.1;Parent=gene-NDY24_05145;Dbxref=NCBI_GP:UUE99186.1;Name=UUE99186.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036123.1;locus_tag=NDY24_05145;product=50S ribosomal protein L3;protein_id=UUE99186.1;transl_table=11 CP098602.1 Genbank gene 1136443 1136754 . - . ID=gene-NDY24_05150;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=NDY24_05150 CP098602.1 Protein Homology CDS 1136443 1136754 . - 0 ID=cds-UUE99187.1;Parent=gene-NDY24_05150;Dbxref=NCBI_GP:UUE99187.1;Name=UUE99187.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160477.1;locus_tag=NDY24_05150;product=30S ribosomal protein S10;protein_id=UUE99187.1;transl_table=11 CP098602.1 Genbank gene 1137221 1138411 . - . ID=gene-NDY24_05155;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=NDY24_05155 CP098602.1 Protein Homology CDS 1137221 1138411 . - 0 ID=cds-UUE99188.1;Parent=gene-NDY24_05155;Dbxref=NCBI_GP:UUE99188.1;Name=UUE99188.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486726.1;locus_tag=NDY24_05155;product=elongation factor Tu;protein_id=UUE99188.1;transl_table=11 CP098602.1 Genbank gene 1138462 1140579 . - . ID=gene-NDY24_05160;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=NDY24_05160 CP098602.1 Protein Homology CDS 1138462 1140579 . - 0 ID=cds-UUE99189.1;Parent=gene-NDY24_05160;Dbxref=NCBI_GP:UUE99189.1;Name=UUE99189.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156211.1;locus_tag=NDY24_05160;product=elongation factor G;protein_id=UUE99189.1;transl_table=11 CP098602.1 Genbank gene 1140720 1141187 . - . ID=gene-NDY24_05165;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=NDY24_05165 CP098602.1 Protein Homology CDS 1140720 1141187 . - 0 ID=cds-UUE99190.1;Parent=gene-NDY24_05165;Dbxref=NCBI_GP:UUE99190.1;Name=UUE99190.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450629.1;locus_tag=NDY24_05165;product=30S ribosomal protein S7;protein_id=UUE99190.1;transl_table=11 CP098602.1 Genbank gene 1141200 1141574 . - . ID=gene-NDY24_05170;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=NDY24_05170 CP098602.1 Protein Homology CDS 1141200 1141574 . - 0 ID=cds-UUE99191.1;Parent=gene-NDY24_05170;Dbxref=NCBI_GP:UUE99191.1;Name=UUE99191.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003469157.1;locus_tag=NDY24_05170;product=30S ribosomal protein S12;protein_id=UUE99191.1;transl_table=11 CP098602.1 Genbank gene 1141797 1146014 . - . ID=gene-NDY24_05175;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=NDY24_05175 CP098602.1 Protein Homology CDS 1141797 1146014 . - 0 ID=cds-UUE99192.1;Parent=gene-NDY24_05175;Dbxref=NCBI_GP:UUE99192.1;Name=UUE99192.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=transcription%2C DNA-templated|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036119.1;locus_tag=NDY24_05175;product=DNA-directed RNA polymerase subunit beta';protein_id=UUE99192.1;transl_table=11 CP098602.1 Genbank gene 1146115 1150266 . - . ID=gene-NDY24_05180;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=NDY24_05180 CP098602.1 Protein Homology CDS 1146115 1150266 . - 0 ID=cds-UUE99193.1;Parent=gene-NDY24_05180;Dbxref=NCBI_GP:UUE99193.1;Name=UUE99193.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=transcription%2C DNA-templated|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930752.1;locus_tag=NDY24_05180;product=DNA-directed RNA polymerase subunit beta;protein_id=UUE99193.1;transl_table=11 CP098602.1 Genbank gene 1150561 1150926 . - . ID=gene-NDY24_05185;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=NDY24_05185 CP098602.1 Protein Homology CDS 1150561 1150926 . - 0 ID=cds-UUE99194.1;Parent=gene-NDY24_05185;Dbxref=NCBI_GP:UUE99194.1;Name=UUE99194.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574194.1;locus_tag=NDY24_05185;product=50S ribosomal protein L7/L12;protein_id=UUE99194.1;transl_table=11 CP098602.1 Genbank gene 1150981 1151514 . - . ID=gene-NDY24_05190;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=NDY24_05190 CP098602.1 Protein Homology CDS 1150981 1151514 . - 0 ID=cds-UUE99195.1;Parent=gene-NDY24_05190;Dbxref=NCBI_GP:UUE99195.1;Name=UUE99195.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036116.1;locus_tag=NDY24_05190;product=50S ribosomal protein L10;protein_id=UUE99195.1;transl_table=11 CP098602.1 Genbank gene 1152064 1152762 . - . ID=gene-NDY24_05195;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=NDY24_05195 CP098602.1 Protein Homology CDS 1152064 1152762 . - 0 ID=cds-UUE99196.1;Parent=gene-NDY24_05195;Dbxref=NCBI_GP:UUE99196.1;Name=UUE99196.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010341341.1;locus_tag=NDY24_05195;product=50S ribosomal protein L1;protein_id=UUE99196.1;transl_table=11 CP098602.1 Genbank gene 1152766 1153194 . - . ID=gene-NDY24_05200;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=NDY24_05200 CP098602.1 Protein Homology CDS 1152766 1153194 . - 0 ID=cds-UUE99197.1;Parent=gene-NDY24_05200;Dbxref=NCBI_GP:UUE99197.1;Name=UUE99197.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993334.1;locus_tag=NDY24_05200;product=50S ribosomal protein L11;protein_id=UUE99197.1;transl_table=11 CP098602.1 Genbank gene 1153393 1153950 . - . ID=gene-NDY24_05205;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=NDY24_05205 CP098602.1 Protein Homology CDS 1153393 1153950 . - 0 ID=cds-UUE99198.1;Parent=gene-NDY24_05205;Dbxref=NCBI_GP:UUE99198.1;Name=UUE99198.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription%2C termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162956.1;locus_tag=NDY24_05205;product=transcription termination/antitermination protein NusG;protein_id=UUE99198.1;transl_table=11 CP098602.1 Genbank gene 1153964 1154374 . - . ID=gene-NDY24_05210;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=NDY24_05210 CP098602.1 Protein Homology CDS 1153964 1154374 . - 0 ID=cds-UUE99199.1;Parent=gene-NDY24_05210;Dbxref=NCBI_GP:UUE99199.1;Name=UUE99199.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993330.1;locus_tag=NDY24_05210;product=preprotein translocase subunit SecE;protein_id=UUE99199.1;transl_table=11 CP098602.1 Genbank gene 1154424 1154499 . - . ID=gene-NDY24_05215;Name=NDY24_05215;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_05215 CP098602.1 tRNAscan-SE tRNA 1154424 1154499 . - . ID=rna-NDY24_05215;Parent=gene-NDY24_05215;anticodon=(pos:complement(1154464..1154466));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_05215;product=tRNA-Trp CP098602.1 tRNAscan-SE exon 1154424 1154499 . - . ID=exon-NDY24_05215-1;Parent=rna-NDY24_05215;anticodon=(pos:complement(1154464..1154466));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_05215;product=tRNA-Trp CP098602.1 Genbank gene 1154606 1155796 . - . ID=gene-NDY24_05220;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=NDY24_05220 CP098602.1 Protein Homology CDS 1154606 1155796 . - 0 ID=cds-UUE99200.1;Parent=gene-NDY24_05220;Dbxref=NCBI_GP:UUE99200.1;Name=UUE99200.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486726.1;locus_tag=NDY24_05220;product=elongation factor Tu;protein_id=UUE99200.1;transl_table=11 CP098602.1 Genbank gene 1155843 1155918 . - . ID=gene-NDY24_05225;Name=NDY24_05225;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_05225 CP098602.1 tRNAscan-SE tRNA 1155843 1155918 . - . ID=rna-NDY24_05225;Parent=gene-NDY24_05225;anticodon=(pos:complement(1155883..1155885));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_05225;product=tRNA-Thr CP098602.1 tRNAscan-SE exon 1155843 1155918 . - . ID=exon-NDY24_05225-1;Parent=rna-NDY24_05225;anticodon=(pos:complement(1155883..1155885));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_05225;product=tRNA-Thr CP098602.1 Genbank gene 1155952 1156025 . - . ID=gene-NDY24_05230;Name=NDY24_05230;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_05230 CP098602.1 tRNAscan-SE tRNA 1155952 1156025 . - . ID=rna-NDY24_05230;Parent=gene-NDY24_05230;anticodon=(pos:complement(1155991..1155993));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_05230;product=tRNA-Gly CP098602.1 tRNAscan-SE exon 1155952 1156025 . - . ID=exon-NDY24_05230-1;Parent=rna-NDY24_05230;anticodon=(pos:complement(1155991..1155993));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_05230;product=tRNA-Gly CP098602.1 Genbank gene 1156055 1156140 . - . ID=gene-NDY24_05235;Name=NDY24_05235;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_05235 CP098602.1 tRNAscan-SE tRNA 1156055 1156140 . - . ID=rna-NDY24_05235;Parent=gene-NDY24_05235;anticodon=(pos:complement(1156104..1156106));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_05235;product=tRNA-Tyr CP098602.1 tRNAscan-SE exon 1156055 1156140 . - . ID=exon-NDY24_05235-1;Parent=rna-NDY24_05235;anticodon=(pos:complement(1156104..1156106));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_05235;product=tRNA-Tyr CP098602.1 Genbank gene 1156294 1157385 . - . ID=gene-NDY24_05240;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=NDY24_05240 CP098602.1 Protein Homology CDS 1156294 1157385 . - 0 ID=cds-UUE99201.1;Parent=gene-NDY24_05240;Dbxref=NCBI_GP:UUE99201.1;Name=UUE99201.1;Ontology_term=GO:0005525;gbkey=CDS;gene=ychF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811726.1;locus_tag=NDY24_05240;product=redox-regulated ATPase YchF;protein_id=UUE99201.1;transl_table=11 CP098602.1 Genbank gene 1157460 1158044 . - . ID=gene-NDY24_05245;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=NDY24_05245 CP098602.1 Protein Homology CDS 1157460 1158044 . - 0 ID=cds-UUE99202.1;Parent=gene-NDY24_05245;Dbxref=NCBI_GP:UUE99202.1;Name=UUE99202.1;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968854.1;locus_tag=NDY24_05245;product=aminoacyl-tRNA hydrolase;protein_id=UUE99202.1;transl_table=11 CP098602.1 Genbank gene 1158096 1158731 . - . ID=gene-NDY24_05250;Name=NDY24_05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05250 CP098602.1 Protein Homology CDS 1158096 1158731 . - 0 ID=cds-UUE99203.1;Parent=gene-NDY24_05250;Dbxref=NCBI_GP:UUE99203.1;Name=UUE99203.1;Ontology_term=GO:0006412,GO:0003735,GO:0008097;gbkey=CDS;go_function=structural constituent of ribosome|0003735||IEA,5S rRNA binding|0008097||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486759.1;locus_tag=NDY24_05250;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=UUE99203.1;transl_table=11 CP098602.1 Genbank gene 1158841 1159800 . - . ID=gene-NDY24_05255;Name=NDY24_05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05255 CP098602.1 Protein Homology CDS 1158841 1159800 . - 0 ID=cds-UUE99204.1;Parent=gene-NDY24_05255;Dbxref=NCBI_GP:UUE99204.1;Name=UUE99204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486761.1;locus_tag=NDY24_05255;product=ribose-phosphate diphosphokinase;protein_id=UUE99204.1;transl_table=11 CP098602.1 Genbank gene 1159958 1160034 . - . ID=gene-NDY24_05260;Name=NDY24_05260;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_05260 CP098602.1 tRNAscan-SE tRNA 1159958 1160034 . - . ID=rna-NDY24_05260;Parent=gene-NDY24_05260;anticodon=(pos:complement(1159998..1160000));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_05260;product=tRNA-Gln CP098602.1 tRNAscan-SE exon 1159958 1160034 . - . ID=exon-NDY24_05260-1;Parent=rna-NDY24_05260;anticodon=(pos:complement(1159998..1160000));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_05260;product=tRNA-Gln CP098602.1 Genbank gene 1160038 1160925 . - . ID=gene-NDY24_05265;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=NDY24_05265 CP098602.1 Protein Homology CDS 1160038 1160925 . - 0 ID=cds-UUE99205.1;Parent=gene-NDY24_05265;Dbxref=NCBI_GP:UUE99205.1;Name=UUE99205.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036107.1;locus_tag=NDY24_05265;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=UUE99205.1;transl_table=11 CP098602.1 Genbank gene 1160907 1161563 . - . ID=gene-NDY24_05270;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=NDY24_05270 CP098602.1 Protein Homology CDS 1160907 1161563 . - 0 ID=cds-UUE99206.1;Parent=gene-NDY24_05270;Dbxref=NCBI_GP:UUE99206.1;Name=UUE99206.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolB;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172004.1;locus_tag=NDY24_05270;product=lipoprotein insertase outer membrane protein LolB;protein_id=UUE99206.1;transl_table=11 CP098602.1 Genbank gene 1161560 1163248 . - . ID=gene-NDY24_05275;Name=NDY24_05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05275 CP098602.1 Protein Homology CDS 1161560 1163248 . - 0 ID=cds-UUE99207.1;Parent=gene-NDY24_05275;Dbxref=NCBI_GP:UUE99207.1;Name=UUE99207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972526.1;locus_tag=NDY24_05275;product=tetratricopeptide repeat protein;protein_id=UUE99207.1;transl_table=11 CP098602.1 Genbank gene 1163314 1164612 . + . ID=gene-NDY24_05280;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=NDY24_05280 CP098602.1 Protein Homology CDS 1163314 1164612 . + 0 ID=cds-UUE99208.1;Parent=gene-NDY24_05280;Dbxref=NCBI_GP:UUE99208.1;Name=UUE99208.1;Ontology_term=GO:0006779,GO:0008883,GO:0005737;gbkey=CDS;gene=hemA;go_component=cytoplasm|0005737||IEA;go_function=glutamyl-tRNA reductase activity|0008883||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450610.1;locus_tag=NDY24_05280;product=glutamyl-tRNA reductase;protein_id=UUE99208.1;transl_table=11 CP098602.1 Genbank gene 1164590 1165675 . + . ID=gene-NDY24_05285;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=NDY24_05285 CP098602.1 Protein Homology CDS 1164590 1165675 . + 0 ID=cds-UUE99209.1;Parent=gene-NDY24_05285;Dbxref=NCBI_GP:UUE99209.1;Name=UUE99209.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300176.1;locus_tag=NDY24_05285;product=peptide chain release factor 1;protein_id=UUE99209.1;transl_table=11 CP098602.1 Genbank gene 1165672 1167378 . + . ID=gene-NDY24_05290;Name=NDY24_05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05290 CP098602.1 Protein Homology CDS 1165672 1167378 . + 0 ID=cds-UUE99210.1;Parent=gene-NDY24_05290;Dbxref=NCBI_GP:UUE99210.1;Name=UUE99210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118468.1;locus_tag=NDY24_05290;product=tetratricopeptide repeat protein;protein_id=UUE99210.1;transl_table=11 CP098602.1 Genbank gene 1167953 1168471 . + . ID=gene-NDY24_05295;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=NDY24_05295 CP098602.1 Protein Homology CDS 1167953 1168471 . + 0 ID=cds-UUE99211.1;Parent=gene-NDY24_05295;Dbxref=NCBI_GP:UUE99211.1;Name=UUE99211.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346528.1;locus_tag=NDY24_05295;product=molybdenum cofactor biosynthesis protein B;protein_id=UUE99211.1;transl_table=11 CP098602.1 Genbank gene 1168503 1169285 . + . ID=gene-NDY24_05300;Name=ppk2;gbkey=Gene;gene=ppk2;gene_biotype=protein_coding;locus_tag=NDY24_05300 CP098602.1 Protein Homology CDS 1168503 1169285 . + 0 ID=cds-UUE99212.1;Parent=gene-NDY24_05300;Dbxref=NCBI_GP:UUE99212.1;Name=UUE99212.1;Ontology_term=GO:0006793,GO:0008976,GO:0005575;gbkey=CDS;gene=ppk2;go_component=cellular_component|0005575||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=phosphorus metabolic process|0006793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965859.1;locus_tag=NDY24_05300;product=polyphosphate kinase 2;protein_id=UUE99212.1;transl_table=11 CP098602.1 Genbank gene 1169267 1170499 . - . ID=gene-NDY24_05305;Name=NDY24_05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05305 CP098602.1 Protein Homology CDS 1169267 1170499 . - 0 ID=cds-UUE99213.1;Parent=gene-NDY24_05305;Dbxref=NCBI_GP:UUE99213.1;Name=UUE99213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005925993.1;locus_tag=NDY24_05305;product=hypothetical protein;protein_id=UUE99213.1;transl_table=11 CP098602.1 Genbank gene 1170585 1170851 . - . ID=gene-NDY24_05310;Name=NDY24_05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05310 CP098602.1 Protein Homology CDS 1170585 1170851 . - 0 ID=cds-UUE99214.1;Parent=gene-NDY24_05310;Dbxref=NCBI_GP:UUE99214.1;Name=UUE99214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112879.1;locus_tag=NDY24_05310;product=acylphosphatase;protein_id=UUE99214.1;transl_table=11 CP098602.1 Genbank gene 1170851 1171462 . - . ID=gene-NDY24_05315;Name=NDY24_05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05315 CP098602.1 Protein Homology CDS 1170851 1171462 . - 0 ID=cds-UUE99215.1;Parent=gene-NDY24_05315;Dbxref=NCBI_GP:UUE99215.1;Name=UUE99215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346527.1;locus_tag=NDY24_05315;product=TlpA family protein disulfide reductase;protein_id=UUE99215.1;transl_table=11 CP098602.1 Genbank gene 1171459 1172736 . - . ID=gene-NDY24_05320;Name=NDY24_05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05320 CP098602.1 Protein Homology CDS 1171459 1172736 . - 0 ID=cds-UUE99216.1;Parent=gene-NDY24_05320;Dbxref=NCBI_GP:UUE99216.1;Name=UUE99216.1;Ontology_term=GO:0008150,GO:0003674,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036096.1;locus_tag=NDY24_05320;product=YihY family inner membrane protein;protein_id=UUE99216.1;transl_table=11 CP098602.1 Genbank gene 1172848 1173444 . + . ID=gene-NDY24_05325;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=NDY24_05325 CP098602.1 Protein Homology CDS 1172848 1173444 . + 0 ID=cds-UUE99217.1;Parent=gene-NDY24_05325;Dbxref=NCBI_GP:UUE99217.1;Name=UUE99217.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367335.1;locus_tag=NDY24_05325;product=NAD(P)H:quinone oxidoreductase;protein_id=UUE99217.1;transl_table=11 CP098602.1 Genbank pseudogene 1173441 1173784 . + . ID=gene-NDY24_05330;Name=NDY24_05330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_05330;pseudo=true CP098602.1 Protein Homology CDS 1173441 1173784 . + 0 ID=cds-NDY24_05330;Parent=gene-NDY24_05330;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156951.1;locus_tag=NDY24_05330;product=DUF2069 domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1173940 1174425 . + . ID=gene-NDY24_05335;Name=NDY24_05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05335 CP098602.1 Protein Homology CDS 1173940 1174425 . + 0 ID=cds-UUE99218.1;Parent=gene-NDY24_05335;Dbxref=NCBI_GP:UUE99218.1;Name=UUE99218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488754.1;locus_tag=NDY24_05335;product=asparaginase domain-containing protein;protein_id=UUE99218.1;transl_table=11 CP098602.1 Genbank gene 1174430 1174903 . + . ID=gene-NDY24_05340;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=NDY24_05340 CP098602.1 Protein Homology CDS 1174430 1174903 . + 0 ID=cds-UUE99219.1;Parent=gene-NDY24_05340;Dbxref=NCBI_GP:UUE99219.1;Name=UUE99219.1;Ontology_term=GO:0043039,GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA editing activity|0002161||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988832.1;locus_tag=NDY24_05340;product=Cys-tRNA(Pro) deacylase;protein_id=UUE99219.1;transl_table=11 CP098602.1 Genbank gene 1175173 1176810 . - . ID=gene-NDY24_05345;Name=NDY24_05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05345 CP098602.1 Protein Homology CDS 1175173 1176810 . - 0 ID=cds-UUE99220.1;Parent=gene-NDY24_05345;Dbxref=NCBI_GP:UUE99220.1;Name=UUE99220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112882.1;locus_tag=NDY24_05345;product=S8 family serine peptidase;protein_id=UUE99220.1;transl_table=11 CP098602.1 Genbank gene 1177144 1178553 . - . ID=gene-NDY24_05350;Name=NDY24_05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05350 CP098602.1 Protein Homology CDS 1177144 1178553 . - 0 ID=cds-UUE99221.1;Parent=gene-NDY24_05350;Dbxref=NCBI_GP:UUE99221.1;Name=UUE99221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016900706.1;locus_tag=NDY24_05350;product=S8 family peptidase;protein_id=UUE99221.1;transl_table=11 CP098602.1 Genbank gene 1178818 1180563 . - . ID=gene-NDY24_05355;Name=NDY24_05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05355 CP098602.1 Protein Homology CDS 1178818 1180563 . - 0 ID=cds-UUE99222.1;Parent=gene-NDY24_05355;Dbxref=NCBI_GP:UUE99222.1;Name=UUE99222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972507.1;locus_tag=NDY24_05355;product=S8 family serine peptidase;protein_id=UUE99222.1;transl_table=11 CP098602.1 Genbank pseudogene 1180871 1181957 . - . ID=gene-NDY24_05360;Name=NDY24_05360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_05360;pseudo=true CP098602.1 Protein Homology CDS 1180871 1181957 . - 0 ID=cds-NDY24_05360;Parent=gene-NDY24_05360;Note=frameshifted;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036086.1;locus_tag=NDY24_05360;product=branched-chain amino acid aminotransferase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1182022 1182576 . - . ID=gene-NDY24_05365;Name=sufT;gbkey=Gene;gene=sufT;gene_biotype=protein_coding;locus_tag=NDY24_05365 CP098602.1 Protein Homology CDS 1182022 1182576 . - 0 ID=cds-UUE99223.1;Parent=gene-NDY24_05365;Dbxref=NCBI_GP:UUE99223.1;Name=UUE99223.1;Ontology_term=GO:0016226,GO:0003674;gbkey=CDS;gene=sufT;go_function=molecular_function|0003674||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488784.1;locus_tag=NDY24_05365;product=putative Fe-S cluster assembly protein SufT;protein_id=UUE99223.1;transl_table=11 CP098602.1 Genbank gene 1182772 1183191 . + . ID=gene-NDY24_05370;Name=NDY24_05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05370 CP098602.1 Protein Homology CDS 1182772 1183191 . + 0 ID=cds-UUE99224.1;Parent=gene-NDY24_05370;Dbxref=NCBI_GP:UUE99224.1;Name=UUE99224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156959.1;locus_tag=NDY24_05370;product=hypothetical protein;protein_id=UUE99224.1;transl_table=11 CP098602.1 Genbank gene 1183437 1184000 . + . ID=gene-NDY24_05375;Name=NDY24_05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05375 CP098602.1 Protein Homology CDS 1183437 1184000 . + 0 ID=cds-UUE99225.1;Parent=gene-NDY24_05375;Dbxref=NCBI_GP:UUE99225.1;Name=UUE99225.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription%2C initiation|0006352||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156960.1;locus_tag=NDY24_05375;product=RNA polymerase sigma factor;protein_id=UUE99225.1;transl_table=11 CP098602.1 Genbank gene 1183997 1184341 . + . ID=gene-NDY24_05380;Name=NDY24_05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05380 CP098602.1 Protein Homology CDS 1183997 1184341 . + 0 ID=cds-UUE99226.1;Parent=gene-NDY24_05380;Dbxref=NCBI_GP:UUE99226.1;Name=UUE99226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008578132.1;locus_tag=NDY24_05380;product=hypothetical protein;protein_id=UUE99226.1;transl_table=11 CP098602.1 Genbank gene 1184347 1184841 . + . ID=gene-NDY24_05385;Name=NDY24_05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05385 CP098602.1 Protein Homology CDS 1184347 1184841 . + 0 ID=cds-UUE99227.1;Parent=gene-NDY24_05385;Dbxref=NCBI_GP:UUE99227.1;Name=UUE99227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156962.1;locus_tag=NDY24_05385;product=DUF3106 domain-containing protein;protein_id=UUE99227.1;transl_table=11 CP098602.1 Genbank gene 1184968 1185567 . - . ID=gene-NDY24_05390;Name=NDY24_05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05390 CP098602.1 Protein Homology CDS 1184968 1185567 . - 0 ID=cds-UUE99228.1;Parent=gene-NDY24_05390;Dbxref=NCBI_GP:UUE99228.1;Name=UUE99228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915547.1;locus_tag=NDY24_05390;product=TetR/AcrR family transcriptional regulator;protein_id=UUE99228.1;transl_table=11 CP098602.1 Genbank gene 1185698 1186564 . + . ID=gene-NDY24_05395;Name=NDY24_05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05395 CP098602.1 Protein Homology CDS 1185698 1186564 . + 0 ID=cds-UUE99229.1;Parent=gene-NDY24_05395;Dbxref=NCBI_GP:UUE99229.1;Name=UUE99229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451763.1;locus_tag=NDY24_05395;product=lysophospholipase;protein_id=UUE99229.1;transl_table=11 CP098602.1 Genbank gene 1186751 1189114 . - . ID=gene-NDY24_05400;Name=NDY24_05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05400 CP098602.1 Protein Homology CDS 1186751 1189114 . - 0 ID=cds-UUE99230.1;Parent=gene-NDY24_05400;Dbxref=NCBI_GP:UUE99230.1;Name=UUE99230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915543.1;locus_tag=NDY24_05400;product=DUF1631 domain-containing protein;protein_id=UUE99230.1;transl_table=11 CP098602.1 Genbank gene 1189476 1190051 . + . ID=gene-NDY24_05405;Name=NDY24_05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05405 CP098602.1 Protein Homology CDS 1189476 1190051 . + 0 ID=cds-UUE99231.1;Parent=gene-NDY24_05405;Dbxref=NCBI_GP:UUE99231.1;Name=UUE99231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915539.1;locus_tag=NDY24_05405;product=nitroreductase;protein_id=UUE99231.1;transl_table=11 CP098602.1 Genbank gene 1190039 1191034 . + . ID=gene-NDY24_05410;Name=NDY24_05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05410 CP098602.1 Protein Homology CDS 1190039 1191034 . + 0 ID=cds-UUF00290.1;Parent=gene-NDY24_05410;Dbxref=NCBI_GP:UUF00290.1;Name=UUF00290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451766.1;locus_tag=NDY24_05410;product=exodeoxyribonuclease IX;protein_id=UUF00290.1;transl_table=11 CP098602.1 Genbank gene 1191031 1191582 . + . ID=gene-NDY24_05415;Name=NDY24_05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05415 CP098602.1 Protein Homology CDS 1191031 1191582 . + 0 ID=cds-UUE99232.1;Parent=gene-NDY24_05415;Dbxref=NCBI_GP:UUE99232.1;Name=UUE99232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472542.1;locus_tag=NDY24_05415;product=NUDIX hydrolase;protein_id=UUE99232.1;transl_table=11 CP098602.1 Genbank gene 1191575 1192417 . + . ID=gene-NDY24_05420;Name=NDY24_05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05420 CP098602.1 Protein Homology CDS 1191575 1192417 . + 0 ID=cds-UUE99233.1;Parent=gene-NDY24_05420;Dbxref=NCBI_GP:UUE99233.1;Name=UUE99233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451768.1;locus_tag=NDY24_05420;product=N-formylglutamate amidohydrolase;protein_id=UUE99233.1;transl_table=11 CP098602.1 Genbank gene 1192541 1193482 . - . ID=gene-NDY24_05425;Name=pip;gbkey=Gene;gene=pip;gene_biotype=protein_coding;locus_tag=NDY24_05425 CP098602.1 Protein Homology CDS 1192541 1193482 . - 0 ID=cds-UUE99234.1;Parent=gene-NDY24_05425;Dbxref=NCBI_GP:UUE99234.1;Name=UUE99234.1;Ontology_term=GO:0030163,GO:0004177;gbkey=CDS;gene=pip;go_function=aminopeptidase activity|0004177||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156969.1;locus_tag=NDY24_05425;product=prolyl aminopeptidase;protein_id=UUE99234.1;transl_table=11 CP098602.1 Genbank gene 1193714 1194565 . - . ID=gene-NDY24_05430;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=NDY24_05430 CP098602.1 Protein Homology CDS 1193714 1194565 . - 0 ID=cds-UUE99235.1;Parent=gene-NDY24_05430;Dbxref=NCBI_GP:UUE99235.1;Name=UUE99235.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036071.1;locus_tag=NDY24_05430;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=UUE99235.1;transl_table=11 CP098602.1 Genbank gene 1194767 1195330 . + . ID=gene-NDY24_05435;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=NDY24_05435 CP098602.1 Protein Homology CDS 1194767 1195330 . + 0 ID=cds-UUE99236.1;Parent=gene-NDY24_05435;Dbxref=NCBI_GP:UUE99236.1;Name=UUE99236.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=alkylhydroperoxide reductase activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114658.1;locus_tag=NDY24_05435;product=alkyl hydroperoxide reductase subunit C;protein_id=UUE99236.1;transl_table=11 CP098602.1 Genbank gene 1195549 1197141 . + . ID=gene-NDY24_05440;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=NDY24_05440 CP098602.1 Protein Homology CDS 1195549 1197141 . + 0 ID=cds-UUE99237.1;Parent=gene-NDY24_05440;Dbxref=NCBI_GP:UUE99237.1;Name=UUE99237.1;Ontology_term=GO:0006805,GO:0009398,GO:0016668;gbkey=CDS;gene=ahpF;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA;go_process=xenobiotic metabolic process|0006805||IEA,FMN biosynthetic process|0009398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488827.1;locus_tag=NDY24_05440;product=alkyl hydroperoxide reductase subunit F;protein_id=UUE99237.1;transl_table=11 CP098602.1 Genbank gene 1197232 1198173 . + . ID=gene-NDY24_05445;Name=NDY24_05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05445 CP098602.1 Protein Homology CDS 1197232 1198173 . + 0 ID=cds-UUE99238.1;Parent=gene-NDY24_05445;Dbxref=NCBI_GP:UUE99238.1;Name=UUE99238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811807.1;locus_tag=NDY24_05445;product=LysR substrate-binding domain-containing protein;protein_id=UUE99238.1;transl_table=11 CP098602.1 Genbank gene 1198584 1199051 . + . ID=gene-NDY24_05450;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=NDY24_05450 CP098602.1 Protein Homology CDS 1198584 1199051 . + 0 ID=cds-UUE99239.1;Parent=gene-NDY24_05450;Dbxref=NCBI_GP:UUE99239.1;Name=UUE99239.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription%2C elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300210.1;locus_tag=NDY24_05450;product=nucleoside diphosphate kinase regulator;protein_id=UUE99239.1;transl_table=11 CP098602.1 Genbank gene 1199119 1200087 . + . ID=gene-NDY24_05455;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=NDY24_05455 CP098602.1 Protein Homology CDS 1199119 1200087 . + 0 ID=cds-UUE99240.1;Parent=gene-NDY24_05455;Dbxref=NCBI_GP:UUE99240.1;Name=UUE99240.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;gene=tal;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089458.1;locus_tag=NDY24_05455;product=transaldolase;protein_id=UUE99240.1;transl_table=11 CP098602.1 Genbank pseudogene 1200245 1200816 . + . ID=gene-NDY24_05460;Name=NDY24_05460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_05460;pseudo=true CP098602.1 Protein Homology CDS 1200245 1200816 . + 0 ID=cds-NDY24_05460;Parent=gene-NDY24_05460;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156974.1;locus_tag=NDY24_05460;product=glutamine amidotransferase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1201079 1201729 . - . ID=gene-NDY24_05465;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=NDY24_05465 CP098602.1 Protein Homology CDS 1201079 1201729 . - 0 ID=cds-UUE99241.1;Parent=gene-NDY24_05465;Dbxref=NCBI_GP:UUE99241.1;Name=UUE99241.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089456.1;locus_tag=NDY24_05465;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=UUE99241.1;transl_table=11 CP098602.1 Genbank gene 1201813 1202328 . - . ID=gene-NDY24_05470;Name=NDY24_05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05470 CP098602.1 Protein Homology CDS 1201813 1202328 . - 0 ID=cds-UUE99242.1;Parent=gene-NDY24_05470;Dbxref=NCBI_GP:UUE99242.1;Name=UUE99242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451408.1;locus_tag=NDY24_05470;product=SgcJ/EcaC family oxidoreductase;protein_id=UUE99242.1;transl_table=11 CP098602.1 Genbank gene 1202453 1203160 . + . ID=gene-NDY24_05475;Name=NDY24_05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05475 CP098602.1 Protein Homology CDS 1202453 1203160 . + 0 ID=cds-UUE99243.1;Parent=gene-NDY24_05475;Dbxref=NCBI_GP:UUE99243.1;Name=UUE99243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994157.1;locus_tag=NDY24_05475;product=response regulator transcription factor;protein_id=UUE99243.1;transl_table=11 CP098602.1 Genbank gene 1203157 1205067 . + . ID=gene-NDY24_05480;Name=NDY24_05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05480 CP098602.1 Protein Homology CDS 1203157 1205067 . + 0 ID=cds-UUE99244.1;Parent=gene-NDY24_05480;Dbxref=NCBI_GP:UUE99244.1;Name=UUE99244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016900734.1;locus_tag=NDY24_05480;product=ATP-binding protein;protein_id=UUE99244.1;transl_table=11 CP098602.1 Genbank gene 1205064 1205528 . + . ID=gene-NDY24_05485;Name=NDY24_05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05485 CP098602.1 Protein Homology CDS 1205064 1205528 . + 0 ID=cds-UUE99245.1;Parent=gene-NDY24_05485;Dbxref=NCBI_GP:UUE99245.1;Name=UUE99245.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367413.1;locus_tag=NDY24_05485;product=response regulator;protein_id=UUE99245.1;transl_table=11 CP098602.1 Genbank pseudogene 1205609 1205674 . + . ID=gene-NDY24_05490;Name=NDY24_05490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_05490;pseudo=true CP098602.1 Protein Homology CDS 1205609 1205674 . + 0 ID=cds-NDY24_05490;Parent=gene-NDY24_05490;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367413.1;locus_tag=NDY24_05490;product=response regulator;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1206033 1206263 . - . ID=gene-NDY24_05495;Name=NDY24_05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05495 CP098602.1 Protein Homology CDS 1206033 1206263 . - 0 ID=cds-UUE99246.1;Parent=gene-NDY24_05495;Dbxref=NCBI_GP:UUE99246.1;Name=UUE99246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237927.1;locus_tag=NDY24_05495;product=DUF2007 domain-containing protein;protein_id=UUE99246.1;transl_table=11 CP098602.1 Genbank gene 1206266 1206907 . - . ID=gene-NDY24_05500;Name=NDY24_05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05500 CP098602.1 Protein Homology CDS 1206266 1206907 . - 0 ID=cds-UUE99247.1;Parent=gene-NDY24_05500;Dbxref=NCBI_GP:UUE99247.1;Name=UUE99247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449567.1;locus_tag=NDY24_05500;product=glutathione S-transferase family protein;protein_id=UUE99247.1;transl_table=11 CP098602.1 Genbank gene 1207153 1208892 . + . ID=gene-NDY24_05505;Name=NDY24_05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05505 CP098602.1 Protein Homology CDS 1207153 1208892 . + 0 ID=cds-UUE99248.1;Parent=gene-NDY24_05505;Dbxref=NCBI_GP:UUE99248.1;Name=UUE99248.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449568.1;locus_tag=NDY24_05505;product=glutamine--tRNA ligase/YqeY domain fusion protein;protein_id=UUE99248.1;transl_table=11 CP098602.1 Genbank pseudogene 1209120 1210048 . + . ID=gene-NDY24_05510;Name=NDY24_05510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_05510;pseudo=true CP098602.1 Protein Homology CDS 1209120 1210048 . + 0 ID=cds-NDY24_05510;Parent=gene-NDY24_05510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965281.1;locus_tag=NDY24_05510;product=DMT family transporter;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1210536 1210952 . + . ID=gene-NDY24_05515;Name=NDY24_05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05515 CP098602.1 Protein Homology CDS 1210536 1210952 . + 0 ID=cds-UUE99249.1;Parent=gene-NDY24_05515;Dbxref=NCBI_GP:UUE99249.1;Name=UUE99249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112744.1;locus_tag=NDY24_05515;product=hypothetical protein;protein_id=UUE99249.1;transl_table=11 CP098602.1 Genbank gene 1210952 1211512 . + . ID=gene-NDY24_05520;Name=NDY24_05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05520 CP098602.1 Protein Homology CDS 1210952 1211512 . + 0 ID=cds-UUE99250.1;Parent=gene-NDY24_05520;Dbxref=NCBI_GP:UUE99250.1;Name=UUE99250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572602.1;locus_tag=NDY24_05520;product=nucleoside deaminase;protein_id=UUE99250.1;transl_table=11 CP098602.1 Genbank pseudogene 1211549 1212591 . + . ID=gene-NDY24_05525;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=pseudogene;locus_tag=NDY24_05525;pseudo=true CP098602.1 Protein Homology CDS 1211549 1212591 . + 0 ID=cds-NDY24_05525;Parent=gene-NDY24_05525;Note=frameshifted;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260144.1;locus_tag=NDY24_05525;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1212862 1213971 . - . ID=gene-NDY24_05530;Name=NDY24_05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05530 CP098602.1 Protein Homology CDS 1212862 1213971 . - 0 ID=cds-UUE99251.1;Parent=gene-NDY24_05530;Dbxref=NCBI_GP:UUE99251.1;Name=UUE99251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300569.1;locus_tag=NDY24_05530;product=Gfo/Idh/MocA family oxidoreductase;protein_id=UUE99251.1;transl_table=11 CP098602.1 Genbank gene 1214235 1215137 . + . ID=gene-NDY24_05535;Name=NDY24_05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05535 CP098602.1 Protein Homology CDS 1214235 1215137 . + 0 ID=cds-UUE99252.1;Parent=gene-NDY24_05535;Dbxref=NCBI_GP:UUE99252.1;Name=UUE99252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811823.1;locus_tag=NDY24_05535;product=SMP-30/gluconolactonase/LRE family protein;protein_id=UUE99252.1;transl_table=11 CP098602.1 Genbank gene 1215220 1215942 . + . ID=gene-NDY24_05540;Name=NDY24_05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05540 CP098602.1 Protein Homology CDS 1215220 1215942 . + 0 ID=cds-UUE99253.1;Parent=gene-NDY24_05540;Dbxref=NCBI_GP:UUE99253.1;Name=UUE99253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449576.1;locus_tag=NDY24_05540;product=hypothetical protein;protein_id=UUE99253.1;transl_table=11 CP098602.1 Genbank gene 1216087 1216485 . + . ID=gene-NDY24_05545;Name=NDY24_05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05545 CP098602.1 Protein Homology CDS 1216087 1216485 . + 0 ID=cds-UUE99254.1;Parent=gene-NDY24_05545;Dbxref=NCBI_GP:UUE99254.1;Name=UUE99254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449577.1;locus_tag=NDY24_05545;product=EF-hand domain-containing protein;protein_id=UUE99254.1;transl_table=11 CP098602.1 Genbank gene 1217090 1217563 . + . ID=gene-NDY24_05550;Name=NDY24_05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05550 CP098602.1 Protein Homology CDS 1217090 1217563 . + 0 ID=cds-UUE99255.1;Parent=gene-NDY24_05550;Dbxref=NCBI_GP:UUE99255.1;Name=UUE99255.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157297.1;locus_tag=NDY24_05550;product=MarR family transcriptional regulator;protein_id=UUE99255.1;transl_table=11 CP098602.1 Genbank gene 1217598 1218425 . + . ID=gene-NDY24_05555;Name=NDY24_05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05555 CP098602.1 Protein Homology CDS 1217598 1218425 . + 0 ID=cds-UUE99256.1;Parent=gene-NDY24_05555;Dbxref=NCBI_GP:UUE99256.1;Name=UUE99256.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572593.1;locus_tag=NDY24_05555;product=p-hydroxycinnamoyl CoA hydratase/lyase;protein_id=UUE99256.1;transl_table=11 CP098602.1 Genbank gene 1218509 1219978 . + . ID=gene-NDY24_05560;Name=NDY24_05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05560 CP098602.1 Protein Homology CDS 1218509 1219978 . + 0 ID=cds-UUE99257.1;Parent=gene-NDY24_05560;Dbxref=NCBI_GP:UUE99257.1;Name=UUE99257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014077148.1;locus_tag=NDY24_05560;product=aldehyde dehydrogenase;protein_id=UUE99257.1;transl_table=11 CP098602.1 Genbank gene 1220126 1221604 . + . ID=gene-NDY24_05565;Name=NDY24_05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05565 CP098602.1 Protein Homology CDS 1220126 1221604 . + 0 ID=cds-UUE99258.1;Parent=gene-NDY24_05565;Dbxref=NCBI_GP:UUE99258.1;Name=UUE99258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036043.1;locus_tag=NDY24_05565;product=AMP-binding protein;protein_id=UUE99258.1;transl_table=11 CP098602.1 Genbank gene 1221801 1222802 . - . ID=gene-NDY24_05570;Name=NDY24_05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05570 CP098602.1 Protein Homology CDS 1221801 1222802 . - 0 ID=cds-UUE99259.1;Parent=gene-NDY24_05570;Dbxref=NCBI_GP:UUE99259.1;Name=UUE99259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007970087.1;locus_tag=NDY24_05570;product=LysR substrate-binding domain-containing protein;protein_id=UUE99259.1;transl_table=11 CP098602.1 Genbank gene 1222869 1223228 . - . ID=gene-NDY24_05575;Name=NDY24_05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05575 CP098602.1 Protein Homology CDS 1222869 1223228 . - 0 ID=cds-UUE99260.1;Parent=gene-NDY24_05575;Dbxref=NCBI_GP:UUE99260.1;Name=UUE99260.1;Note=extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols%3B part of the bacterial aromatic compound degradation pathway;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157300.1;locus_tag=NDY24_05575;product=protocatechuate 3%2C4-dioxygenase;protein_id=UUE99260.1;transl_table=11 CP098602.1 Genbank gene 1223239 1224135 . - . ID=gene-NDY24_05580;Name=NDY24_05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05580 CP098602.1 Protein Homology CDS 1223239 1224135 . - 0 ID=cds-UUE99261.1;Parent=gene-NDY24_05580;Dbxref=NCBI_GP:UUE99261.1;Name=UUE99261.1;Ontology_term=GO:0006725,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=cellular aromatic compound metabolic process|0006725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157301.1;locus_tag=NDY24_05580;product=gallate dioxygenase;protein_id=UUE99261.1;transl_table=11 CP098602.1 Genbank gene 1224371 1225045 . + . ID=gene-NDY24_05585;Name=NDY24_05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05585 CP098602.1 Protein Homology CDS 1224371 1225045 . + 0 ID=cds-UUE99262.1;Parent=gene-NDY24_05585;Dbxref=NCBI_GP:UUE99262.1;Name=UUE99262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157302.1;locus_tag=NDY24_05585;product=GntR family transcriptional regulator;protein_id=UUE99262.1;transl_table=11 CP098602.1 Genbank gene 1225221 1226168 . - . ID=gene-NDY24_05590;Name=NDY24_05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05590 CP098602.1 Protein Homology CDS 1225221 1226168 . - 0 ID=cds-UUE99263.1;Parent=gene-NDY24_05590;Dbxref=NCBI_GP:UUE99263.1;Name=UUE99263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449027.1;locus_tag=NDY24_05590;product=transporter;protein_id=UUE99263.1;transl_table=11 CP098602.1 Genbank gene 1226364 1226795 . - . ID=gene-NDY24_05595;Name=NDY24_05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05595 CP098602.1 Protein Homology CDS 1226364 1226795 . - 0 ID=cds-UUE99264.1;Parent=gene-NDY24_05595;Dbxref=NCBI_GP:UUE99264.1;Name=UUE99264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036037.1;locus_tag=NDY24_05595;product=nuclear transport factor 2 family protein;protein_id=UUE99264.1;transl_table=11 CP098602.1 Genbank gene 1226900 1227619 . - . ID=gene-NDY24_05600;Name=NDY24_05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05600 CP098602.1 Protein Homology CDS 1226900 1227619 . - 0 ID=cds-UUE99265.1;Parent=gene-NDY24_05600;Dbxref=NCBI_GP:UUE99265.1;Name=UUE99265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506745.1;locus_tag=NDY24_05600;product=alpha/beta hydrolase;protein_id=UUE99265.1;transl_table=11 CP098602.1 Genbank gene 1227722 1228903 . - . ID=gene-NDY24_05605;Name=NDY24_05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05605 CP098602.1 Protein Homology CDS 1227722 1228903 . - 0 ID=cds-UUE99266.1;Parent=gene-NDY24_05605;Dbxref=NCBI_GP:UUE99266.1;Name=UUE99266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157306.1;locus_tag=NDY24_05605;product=UbiH/UbiF family hydroxylase;protein_id=UUE99266.1;transl_table=11 CP098602.1 Genbank gene 1228900 1230108 . - . ID=gene-NDY24_05610;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=NDY24_05610 CP098602.1 Protein Homology CDS 1228900 1230108 . - 0 ID=cds-UUE99267.1;Parent=gene-NDY24_05610;Dbxref=NCBI_GP:UUE99267.1;Name=UUE99267.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171680.1;locus_tag=NDY24_05610;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=UUE99267.1;transl_table=11 CP098602.1 Genbank gene 1230238 1230816 . + . ID=gene-NDY24_05615;Name=NDY24_05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05615 CP098602.1 Protein Homology CDS 1230238 1230816 . + 0 ID=cds-UUE99268.1;Parent=gene-NDY24_05615;Dbxref=NCBI_GP:UUE99268.1;Name=UUE99268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381619.1;locus_tag=NDY24_05615;product=hypothetical protein;protein_id=UUE99268.1;transl_table=11 CP098602.1 Genbank gene 1230818 1231375 . + . ID=gene-NDY24_05620;Name=NDY24_05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05620 CP098602.1 Protein Homology CDS 1230818 1231375 . + 0 ID=cds-UUE99269.1;Parent=gene-NDY24_05620;Dbxref=NCBI_GP:UUE99269.1;Name=UUE99269.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;go_function=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502064.1;locus_tag=NDY24_05620;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=UUE99269.1;transl_table=11 CP098602.1 Genbank gene 1231413 1232321 . + . ID=gene-NDY24_05625;Name=NDY24_05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05625 CP098602.1 Protein Homology CDS 1231413 1232321 . + 0 ID=cds-UUE99270.1;Parent=gene-NDY24_05625;Dbxref=NCBI_GP:UUE99270.1;Name=UUE99270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016900762.1;locus_tag=NDY24_05625;product=histone deacetylase family protein;protein_id=UUE99270.1;transl_table=11 CP098602.1 Genbank gene 1232437 1234878 . + . ID=gene-NDY24_05630;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=NDY24_05630 CP098602.1 Protein Homology CDS 1232437 1234878 . + 0 ID=cds-UUE99271.1;Parent=gene-NDY24_05630;Dbxref=NCBI_GP:UUE99271.1;Name=UUE99271.1;gbkey=CDS;gene=lptD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157311.1;locus_tag=NDY24_05630;product=LPS-assembly protein LptD;protein_id=UUE99271.1;transl_table=11 CP098602.1 Genbank gene 1234875 1236275 . + . ID=gene-NDY24_05635;Name=NDY24_05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05635 CP098602.1 Protein Homology CDS 1234875 1236275 . + 0 ID=cds-UUE99272.1;Parent=gene-NDY24_05635;Dbxref=NCBI_GP:UUE99272.1;Name=UUE99272.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157312.1;locus_tag=NDY24_05635;product=peptidylprolyl isomerase;protein_id=UUE99272.1;transl_table=11 CP098602.1 Genbank gene 1236280 1237248 . + . ID=gene-NDY24_05640;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=NDY24_05640 CP098602.1 Protein Homology CDS 1236280 1237248 . + 0 ID=cds-UUE99273.1;Parent=gene-NDY24_05640;Dbxref=NCBI_GP:UUE99273.1;Name=UUE99273.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016900765.1;locus_tag=NDY24_05640;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=UUE99273.1;transl_table=11 CP098602.1 Genbank gene 1237354 1238142 . + . ID=gene-NDY24_05645;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=NDY24_05645 CP098602.1 Protein Homology CDS 1237354 1238142 . + 0 ID=cds-UUE99274.1;Parent=gene-NDY24_05645;Dbxref=NCBI_GP:UUE99274.1;Name=UUE99274.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260168.1;locus_tag=NDY24_05645;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=UUE99274.1;transl_table=11 CP098602.1 Genbank gene 1238179 1238562 . + . ID=gene-NDY24_05650;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=NDY24_05650 CP098602.1 Protein Homology CDS 1238179 1238562 . + 0 ID=cds-UUE99275.1;Parent=gene-NDY24_05650;Dbxref=NCBI_GP:UUE99275.1;Name=UUE99275.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451488.1;locus_tag=NDY24_05650;product=Co2+/Mg2+ efflux protein ApaG;protein_id=UUE99275.1;transl_table=11 CP098602.1 Genbank gene 1238591 1239547 . + . ID=gene-NDY24_05655;Name=NDY24_05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05655 CP098602.1 Protein Homology CDS 1238591 1239547 . + 0 ID=cds-UUE99276.1;Parent=gene-NDY24_05655;Dbxref=NCBI_GP:UUE99276.1;Name=UUE99276.1;Ontology_term=GO:0008803;gbkey=CDS;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451487.1;locus_tag=NDY24_05655;product=symmetrical bis(5'-nucleosyl)-tetraphosphatase;protein_id=UUE99276.1;transl_table=11 CP098602.1 Genbank gene 1240148 1240711 . + . ID=gene-NDY24_05660;Name=msuE;gbkey=Gene;gene=msuE;gene_biotype=protein_coding;locus_tag=NDY24_05660 CP098602.1 Protein Homology CDS 1240148 1240711 . + 0 ID=cds-UUE99277.1;Parent=gene-NDY24_05660;Dbxref=NCBI_GP:UUE99277.1;Name=UUE99277.1;Ontology_term=GO:0016491;gbkey=CDS;gene=msuE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850163.1;locus_tag=NDY24_05660;product=FMN reductase;protein_id=UUE99277.1;transl_table=11 CP098602.1 Genbank gene 1240976 1242139 . + . ID=gene-NDY24_05665;Name=ssuD;gbkey=Gene;gene=ssuD;gene_biotype=protein_coding;locus_tag=NDY24_05665 CP098602.1 Protein Homology CDS 1240976 1242139 . + 0 ID=cds-UUE99278.1;Parent=gene-NDY24_05665;Dbxref=NCBI_GP:UUE99278.1;Name=UUE99278.1;Ontology_term=GO:0006790,GO:0008726,GO:0010181;gbkey=CDS;gene=ssuD;go_function=alkanesulfonate monooxygenase activity|0008726||IEA,FMN binding|0010181||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965783.1;locus_tag=NDY24_05665;product=FMNH2-dependent alkanesulfonate monooxygenase;protein_id=UUE99278.1;transl_table=11 CP098602.1 Genbank gene 1242151 1243155 . + . ID=gene-NDY24_05670;Name=NDY24_05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05670 CP098602.1 Protein Homology CDS 1242151 1243155 . + 0 ID=cds-UUE99279.1;Parent=gene-NDY24_05670;Dbxref=NCBI_GP:UUE99279.1;Name=UUE99279.1;Ontology_term=GO:0042918,GO:0005488,GO:0042626,GO:0009897,GO:0030288,GO:0043190;gbkey=CDS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=binding|0005488||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=alkanesulfonate transport|0042918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451484.1;locus_tag=NDY24_05670;product=aliphatic sulfonate ABC transporter substrate-binding protein;protein_id=UUE99279.1;transl_table=11 CP098602.1 Genbank gene 1243164 1244018 . + . ID=gene-NDY24_05675;Name=NDY24_05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05675 CP098602.1 Protein Homology CDS 1243164 1244018 . + 0 ID=cds-UUE99280.1;Parent=gene-NDY24_05675;Dbxref=NCBI_GP:UUE99280.1;Name=UUE99280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972134.1;locus_tag=NDY24_05675;product=ABC transporter permease;protein_id=UUE99280.1;transl_table=11 CP098602.1 Genbank gene 1244015 1244773 . + . ID=gene-NDY24_05680;Name=NDY24_05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05680 CP098602.1 Protein Homology CDS 1244015 1244773 . + 0 ID=cds-UUE99281.1;Parent=gene-NDY24_05680;Dbxref=NCBI_GP:UUE99281.1;Name=UUE99281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850166.1;locus_tag=NDY24_05680;product=ABC transporter ATP-binding protein;protein_id=UUE99281.1;transl_table=11 CP098602.1 Genbank gene 1245069 1246229 . + . ID=gene-NDY24_05685;Name=NDY24_05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05685 CP098602.1 Protein Homology CDS 1245069 1246229 . + 0 ID=cds-UUE99282.1;Parent=gene-NDY24_05685;Dbxref=NCBI_GP:UUE99282.1;Name=UUE99282.1;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972130.1;locus_tag=NDY24_05685;product=acyl-CoA dehydrogenase family protein;protein_id=UUE99282.1;transl_table=11 CP098602.1 Genbank gene 1246394 1246888 . - . ID=gene-NDY24_05690;Name=NDY24_05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05690 CP098602.1 Protein Homology CDS 1246394 1246888 . - 0 ID=cds-UUE99283.1;Parent=gene-NDY24_05690;Dbxref=NCBI_GP:UUE99283.1;Name=UUE99283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157316.1;locus_tag=NDY24_05690;product=dihydrofolate reductase;protein_id=UUE99283.1;transl_table=11 CP098602.1 Genbank gene 1246933 1247727 . - . ID=gene-NDY24_05695;Name=NDY24_05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05695 CP098602.1 Protein Homology CDS 1246933 1247727 . - 0 ID=cds-UUE99284.1;Parent=gene-NDY24_05695;Dbxref=NCBI_GP:UUE99284.1;Name=UUE99284.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260172.1;locus_tag=NDY24_05695;product=thymidylate synthase;protein_id=UUE99284.1;transl_table=11 CP098602.1 Genbank gene 1247724 1248614 . - . ID=gene-NDY24_05700;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=NDY24_05700 CP098602.1 Protein Homology CDS 1247724 1248614 . - 0 ID=cds-UUE99285.1;Parent=gene-NDY24_05700;Dbxref=NCBI_GP:UUE99285.1;Name=UUE99285.1;Ontology_term=GO:0009249,GO:0008961,GO:0016021;gbkey=CDS;gene=lgt;go_component=integral component of membrane|0016021||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451478.1;locus_tag=NDY24_05700;product=prolipoprotein diacylglyceryl transferase;protein_id=UUE99285.1;transl_table=11 CP098602.1 Genbank gene 1248669 1249160 . - . ID=gene-NDY24_05705;Name=NDY24_05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05705 CP098602.1 Protein Homology CDS 1248669 1249160 . - 0 ID=cds-UUE99286.1;Parent=gene-NDY24_05705;Dbxref=NCBI_GP:UUE99286.1;Name=UUE99286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972126.1;locus_tag=NDY24_05705;product=TPM domain-containing protein;protein_id=UUE99286.1;transl_table=11 CP098602.1 Genbank gene 1249160 1250047 . - . ID=gene-NDY24_05710;Name=NDY24_05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05710 CP098602.1 Protein Homology CDS 1249160 1250047 . - 0 ID=cds-UUE99287.1;Parent=gene-NDY24_05710;Dbxref=NCBI_GP:UUE99287.1;Name=UUE99287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114597.1;locus_tag=NDY24_05710;product=TPM domain-containing protein;protein_id=UUE99287.1;transl_table=11 CP098602.1 Genbank gene 1250342 1250974 . - . ID=gene-NDY24_05715;Name=NDY24_05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05715 CP098602.1 Protein Homology CDS 1250342 1250974 . - 0 ID=cds-UUE99288.1;Parent=gene-NDY24_05715;Dbxref=NCBI_GP:UUE99288.1;Name=UUE99288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381647.1;locus_tag=NDY24_05715;product=LemA family protein;protein_id=UUE99288.1;transl_table=11 CP098602.1 Genbank gene 1251316 1251696 . - . ID=gene-NDY24_05720;Name=NDY24_05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05720 CP098602.1 Protein Homology CDS 1251316 1251696 . - 0 ID=cds-UUE99289.1;Parent=gene-NDY24_05720;Dbxref=NCBI_GP:UUE99289.1;Name=UUE99289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573596.1;locus_tag=NDY24_05720;product=diacylglycerol kinase;protein_id=UUE99289.1;transl_table=11 CP098602.1 Genbank gene 1252015 1252716 . + . ID=gene-NDY24_05725;Name=NDY24_05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05725 CP098602.1 Protein Homology CDS 1252015 1252716 . + 0 ID=cds-UUE99290.1;Parent=gene-NDY24_05725;Dbxref=NCBI_GP:UUE99290.1;Name=UUE99290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157323.1;locus_tag=NDY24_05725;product=SGNH/GDSL hydrolase family protein;protein_id=UUE99290.1;transl_table=11 CP098602.1 Genbank gene 1252748 1254019 . - . ID=gene-NDY24_05730;Name=NDY24_05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05730 CP098602.1 Protein Homology CDS 1252748 1254019 . - 0 ID=cds-UUE99291.1;Parent=gene-NDY24_05730;Dbxref=NCBI_GP:UUE99291.1;Name=UUE99291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016900779.1;locus_tag=NDY24_05730;product=HAMP domain-containing histidine kinase;protein_id=UUE99291.1;transl_table=11 CP098602.1 Genbank gene 1254161 1254874 . - . ID=gene-NDY24_05735;Name=NDY24_05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05735 CP098602.1 Protein Homology CDS 1254161 1254874 . - 0 ID=cds-UUE99292.1;Parent=gene-NDY24_05735;Dbxref=NCBI_GP:UUE99292.1;Name=UUE99292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019661106.1;locus_tag=NDY24_05735;product=response regulator transcription factor;protein_id=UUE99292.1;transl_table=11 CP098602.1 Genbank gene 1254966 1255634 . - . ID=gene-NDY24_05740;Name=NDY24_05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05740 CP098602.1 Protein Homology CDS 1254966 1255634 . - 0 ID=cds-UUE99293.1;Parent=gene-NDY24_05740;Dbxref=NCBI_GP:UUE99293.1;Name=UUE99293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005910775.1;locus_tag=NDY24_05740;product=arylesterase;protein_id=UUE99293.1;transl_table=11 CP098602.1 Genbank gene 1255744 1256343 . + . ID=gene-NDY24_05745;Name=NDY24_05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05745 CP098602.1 Protein Homology CDS 1255744 1256343 . + 0 ID=cds-UUE99294.1;Parent=gene-NDY24_05745;Dbxref=NCBI_GP:UUE99294.1;Name=UUE99294.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811879.1;locus_tag=NDY24_05745;product=ATP-binding cassette domain-containing protein;protein_id=UUE99294.1;transl_table=11 CP098602.1 Genbank gene 1256340 1258823 . + . ID=gene-NDY24_05750;Name=NDY24_05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05750 CP098602.1 Protein Homology CDS 1256340 1258823 . + 0 ID=cds-UUE99295.1;Parent=gene-NDY24_05750;Dbxref=NCBI_GP:UUE99295.1;Name=UUE99295.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485158.1;locus_tag=NDY24_05750;product=FtsX-like permease family protein;protein_id=UUE99295.1;transl_table=11 CP098602.1 Genbank gene 1259069 1259986 . + . ID=gene-NDY24_05755;Name=NDY24_05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05755 CP098602.1 Protein Homology CDS 1259069 1259986 . + 0 ID=cds-UUE99296.1;Parent=gene-NDY24_05755;Dbxref=NCBI_GP:UUE99296.1;Name=UUE99296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015462887.1;locus_tag=NDY24_05755;product=TauD/TfdA family dioxygenase;protein_id=UUE99296.1;transl_table=11 CP098602.1 Genbank gene 1260072 1261121 . + . ID=gene-NDY24_05760;Name=NDY24_05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05760 CP098602.1 Protein Homology CDS 1260072 1261121 . + 0 ID=cds-UUE99297.1;Parent=gene-NDY24_05760;Dbxref=NCBI_GP:UUE99297.1;Name=UUE99297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346464.1;locus_tag=NDY24_05760;product=ABC transporter substrate-binding protein;protein_id=UUE99297.1;transl_table=11 CP098602.1 Genbank gene 1261125 1261964 . + . ID=gene-NDY24_05765;Name=NDY24_05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05765 CP098602.1 Protein Homology CDS 1261125 1261964 . + 0 ID=cds-UUE99298.1;Parent=gene-NDY24_05765;Dbxref=NCBI_GP:UUE99298.1;Name=UUE99298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269992.1;locus_tag=NDY24_05765;product=ABC transporter ATP-binding protein;protein_id=UUE99298.1;transl_table=11 CP098602.1 Genbank gene 1261961 1262845 . + . ID=gene-NDY24_05770;Name=NDY24_05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05770 CP098602.1 Protein Homology CDS 1261961 1262845 . + 0 ID=cds-UUE99299.1;Parent=gene-NDY24_05770;Dbxref=NCBI_GP:UUE99299.1;Name=UUE99299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160361.1;locus_tag=NDY24_05770;product=ABC transporter permease;protein_id=UUE99299.1;transl_table=11 CP098602.1 Genbank gene 1262930 1263283 . + . ID=gene-NDY24_05775;Name=NDY24_05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05775 CP098602.1 Protein Homology CDS 1262930 1263283 . + 0 ID=cds-UUE99300.1;Parent=gene-NDY24_05775;Dbxref=NCBI_GP:UUE99300.1;Name=UUE99300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303348.1;locus_tag=NDY24_05775;product=DMT family protein;protein_id=UUE99300.1;transl_table=11 CP098602.1 Genbank gene 1263378 1264301 . - . ID=gene-NDY24_05780;Name=NDY24_05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05780 CP098602.1 Protein Homology CDS 1263378 1264301 . - 0 ID=cds-UUE99301.1;Parent=gene-NDY24_05780;Dbxref=NCBI_GP:UUE99301.1;Name=UUE99301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162230.1;locus_tag=NDY24_05780;product=hypothetical protein;protein_id=UUE99301.1;transl_table=11 CP098602.1 Genbank gene 1264331 1264963 . - . ID=gene-NDY24_05785;Name=NDY24_05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05785 CP098602.1 Protein Homology CDS 1264331 1264963 . - 0 ID=cds-UUE99302.1;Parent=gene-NDY24_05785;Dbxref=NCBI_GP:UUE99302.1;Name=UUE99302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930913.1;locus_tag=NDY24_05785;product=Hemin transport protein;protein_id=UUE99302.1;transl_table=11 CP098602.1 Genbank gene 1264969 1267200 . - . ID=gene-NDY24_05790;Name=NDY24_05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05790 CP098602.1 Protein Homology CDS 1264969 1267200 . - 0 ID=cds-UUE99303.1;Parent=gene-NDY24_05790;Dbxref=NCBI_GP:UUE99303.1;Name=UUE99303.1;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171678.1;locus_tag=NDY24_05790;product=TonB-dependent hemoglobin/transferrin/lactoferrin family receptor;protein_id=UUE99303.1;transl_table=11 CP098602.1 Genbank gene 1267475 1267714 . - . ID=gene-NDY24_05795;Name=NDY24_05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05795 CP098602.1 Protein Homology CDS 1267475 1267714 . - 0 ID=cds-UUF00291.1;Parent=gene-NDY24_05795;Dbxref=NCBI_GP:UUF00291.1;Name=UUF00291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269995.1;locus_tag=NDY24_05795;product=hemin uptake protein HemP;protein_id=UUF00291.1;transl_table=11 CP098602.1 Genbank gene 1267906 1268874 . - . ID=gene-NDY24_05800;Name=NDY24_05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05800 CP098602.1 Protein Homology CDS 1267906 1268874 . - 0 ID=cds-UUE99304.1;Parent=gene-NDY24_05800;Dbxref=NCBI_GP:UUE99304.1;Name=UUE99304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930920.1;locus_tag=NDY24_05800;product=aldo/keto reductase;protein_id=UUE99304.1;transl_table=11 CP098602.1 Genbank gene 1269596 1270894 . + . ID=gene-NDY24_05805;Name=NDY24_05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05805 CP098602.1 Protein Homology CDS 1269596 1270894 . + 0 ID=cds-UUE99305.1;Parent=gene-NDY24_05805;Dbxref=NCBI_GP:UUE99305.1;Name=UUE99305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304462.1;locus_tag=NDY24_05805;product=NupC/NupG family nucleoside CNT transporter;protein_id=UUE99305.1;transl_table=11 CP098602.1 Genbank gene 1270973 1271929 . + . ID=gene-NDY24_05810;Name=NDY24_05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05810 CP098602.1 Protein Homology CDS 1270973 1271929 . + 0 ID=cds-UUE99306.1;Parent=gene-NDY24_05810;Dbxref=NCBI_GP:UUE99306.1;Name=UUE99306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451422.1;locus_tag=NDY24_05810;product=ribokinase;protein_id=UUE99306.1;transl_table=11 CP098602.1 Genbank gene 1272526 1273524 . + . ID=gene-NDY24_05815;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=NDY24_05815 CP098602.1 Protein Homology CDS 1272526 1273524 . + 0 ID=cds-UUE99307.1;Parent=gene-NDY24_05815;Dbxref=NCBI_GP:UUE99307.1;Name=UUE99307.1;Ontology_term=GO:0008033,GO:0003824,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=catalytic activity|0003824||IEA,oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050554.1;locus_tag=NDY24_05815;product=tRNA dihydrouridine synthase DusB;protein_id=UUE99307.1;transl_table=11 CP098602.1 Genbank gene 1273565 1274392 . + . ID=gene-NDY24_05820;Name=NDY24_05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05820 CP098602.1 Protein Homology CDS 1273565 1274392 . + 0 ID=cds-UUE99308.1;Parent=gene-NDY24_05820;Dbxref=NCBI_GP:UUE99308.1;Name=UUE99308.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485197.1;locus_tag=NDY24_05820;product=methyltransferase domain-containing protein;protein_id=UUE99308.1;transl_table=11 CP098602.1 Genbank gene 1274423 1275511 . - . ID=gene-NDY24_05825;Name=NDY24_05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05825 CP098602.1 Protein Homology CDS 1274423 1275511 . - 0 ID=cds-UUE99309.1;Parent=gene-NDY24_05825;Dbxref=NCBI_GP:UUE99309.1;Name=UUE99309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448525.1;locus_tag=NDY24_05825;product=metal-dependent hydrolase;protein_id=UUE99309.1;transl_table=11 CP098602.1 Genbank gene 1275746 1276957 . + . ID=gene-NDY24_05830;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=NDY24_05830 CP098602.1 Protein Homology CDS 1275746 1276957 . + 0 ID=cds-UUE99310.1;Parent=gene-NDY24_05830;Dbxref=NCBI_GP:UUE99310.1;Name=UUE99310.1;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083625.1;locus_tag=NDY24_05830;product=methionine adenosyltransferase;protein_id=UUE99310.1;transl_table=11 CP098602.1 Genbank gene 1278263 1279642 . - . ID=gene-NDY24_05835;Name=NDY24_05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05835 CP098602.1 Protein Homology CDS 1278263 1279642 . - 0 ID=cds-UUE99311.1;Parent=gene-NDY24_05835;Dbxref=NCBI_GP:UUE99311.1;Name=UUE99311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450147.1;locus_tag=NDY24_05835;product=histidine-type phosphatase;protein_id=UUE99311.1;transl_table=11 CP098602.1 Genbank pseudogene 1280041 1281305 . - . ID=gene-NDY24_05840;Name=NDY24_05840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_05840;pseudo=true CP098602.1 Protein Homology CDS 1280041 1281305 . - 0 ID=cds-NDY24_05840;Parent=gene-NDY24_05840;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017173984.1;locus_tag=NDY24_05840;product=OmpA family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1282260 1284224 . - . ID=gene-NDY24_05845;Name=NDY24_05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05845 CP098602.1 Protein Homology CDS 1282260 1284224 . - 0 ID=cds-UUF00292.1;Parent=gene-NDY24_05845;Dbxref=NCBI_GP:UUF00292.1;Name=UUF00292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450145.1;locus_tag=NDY24_05845;product=alpha/beta fold hydrolase;protein_id=UUF00292.1;transl_table=11 CP098602.1 Genbank gene 1284302 1285339 . - . ID=gene-NDY24_05850;Name=NDY24_05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05850 CP098602.1 Protein Homology CDS 1284302 1285339 . - 0 ID=cds-UUE99312.1;Parent=gene-NDY24_05850;Dbxref=NCBI_GP:UUE99312.1;Name=UUE99312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921039.1;locus_tag=NDY24_05850;product=DUF4105 domain-containing protein;protein_id=UUE99312.1;transl_table=11 CP098602.1 Genbank gene 1285336 1285926 . - . ID=gene-NDY24_05855;Name=NDY24_05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05855 CP098602.1 Protein Homology CDS 1285336 1285926 . - 0 ID=cds-UUF00293.1;Parent=gene-NDY24_05855;Dbxref=NCBI_GP:UUF00293.1;Name=UUF00293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450143.1;locus_tag=NDY24_05855;product=TetR/AcrR family transcriptional regulator;protein_id=UUF00293.1;transl_table=11 CP098602.1 Genbank pseudogene 1286054 1288769 . - . ID=gene-NDY24_05860;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=pseudogene;locus_tag=NDY24_05860;pseudo=true CP098602.1 Protein Homology CDS 1286054 1288769 . - 0 ID=cds-NDY24_05860;Parent=gene-NDY24_05860;Note=frameshifted;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155365.1;locus_tag=NDY24_05860;product=phosphoenolpyruvate carboxylase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 1289169 1291694 . - . ID=gene-NDY24_05865;Name=NDY24_05865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_05865;pseudo=true CP098602.1 Protein Homology CDS 1289169 1291694 . - 0 ID=cds-NDY24_05865;Parent=gene-NDY24_05865;Note=frameshifted;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155366.1;locus_tag=NDY24_05865;product=prolyl oligopeptidase family serine peptidase;pseudo=true;transl_table=11 CP098602.1 cmsearch riboswitch 1291818 1291931 . + . ID=id-CP098602.1:1291818..1291931;Dbxref=RFAM:RF01057;Note=S-adenosyl-L-homocysteine riboswitch;bound_moiety=S-adenosyl-L-homocysteine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP098602.1 Genbank pseudogene 1291963 1293410 . + . ID=gene-NDY24_05870;Name=ahcY;gbkey=Gene;gene=ahcY;gene_biotype=pseudogene;locus_tag=NDY24_05870;pseudo=true CP098602.1 Protein Homology CDS 1291963 1293410 . + 0 ID=cds-NDY24_05870;Parent=gene-NDY24_05870;Note=frameshifted;Ontology_term=GO:0006730,GO:0004013;gbkey=CDS;gene=ahcY;go_function=adenosylhomocysteinase activity|0004013||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035988.1;locus_tag=NDY24_05870;product=adenosylhomocysteinase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1293599 1294201 . + . ID=gene-NDY24_05875;Name=NDY24_05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05875 CP098602.1 Protein Homology CDS 1293599 1294201 . + 0 ID=cds-UUF00294.1;Parent=gene-NDY24_05875;Dbxref=NCBI_GP:UUF00294.1;Name=UUF00294.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016488.2;locus_tag=NDY24_05875;product=hypothetical protein;protein_id=UUF00294.1;transl_table=11 CP098602.1 Genbank gene 1294204 1294515 . + . ID=gene-NDY24_05880;Name=NDY24_05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05880 CP098602.1 GeneMarkS-2+ CDS 1294204 1294515 . + 0 ID=cds-UUE99313.1;Parent=gene-NDY24_05880;Dbxref=NCBI_GP:UUE99313.1;Name=UUE99313.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_05880;product=hypothetical protein;protein_id=UUE99313.1;transl_table=11 CP098602.1 Genbank gene 1294628 1295182 . - . ID=gene-NDY24_05885;Name=NDY24_05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05885 CP098602.1 Protein Homology CDS 1294628 1295182 . - 0 ID=cds-UUE99314.1;Parent=gene-NDY24_05885;Dbxref=NCBI_GP:UUE99314.1;Name=UUE99314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158826.1;locus_tag=NDY24_05885;product=DUF3228 family protein;protein_id=UUE99314.1;transl_table=11 CP098602.1 Genbank gene 1295241 1295786 . - . ID=gene-NDY24_05890;Name=NDY24_05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05890 CP098602.1 Protein Homology CDS 1295241 1295786 . - 0 ID=cds-UUE99315.1;Parent=gene-NDY24_05890;Dbxref=NCBI_GP:UUE99315.1;Name=UUE99315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260209.1;locus_tag=NDY24_05890;product=DUF2058 domain-containing protein;protein_id=UUE99315.1;transl_table=11 CP098602.1 Genbank gene 1296417 1298087 . + . ID=gene-NDY24_05895;Name=NDY24_05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05895 CP098602.1 Protein Homology CDS 1296417 1298087 . + 0 ID=cds-UUE99316.1;Parent=gene-NDY24_05895;Dbxref=NCBI_GP:UUE99316.1;Name=UUE99316.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012521.2;locus_tag=NDY24_05895;product=histidine phosphatase family protein;protein_id=UUE99316.1;transl_table=11 CP098602.1 Genbank gene 1298236 1299171 . - . ID=gene-NDY24_05900;Name=NDY24_05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05900 CP098602.1 Protein Homology CDS 1298236 1299171 . - 0 ID=cds-UUE99317.1;Parent=gene-NDY24_05900;Dbxref=NCBI_GP:UUE99317.1;Name=UUE99317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485244.1;locus_tag=NDY24_05900;product=Gfo/Idh/MocA family oxidoreductase;protein_id=UUE99317.1;transl_table=11 CP098602.1 Genbank gene 1299659 1300636 . - . ID=gene-NDY24_05905;Name=NDY24_05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05905 CP098602.1 Protein Homology CDS 1299659 1300636 . - 0 ID=cds-UUE99318.1;Parent=gene-NDY24_05905;Dbxref=NCBI_GP:UUE99318.1;Name=UUE99318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812340.1;locus_tag=NDY24_05905;product=NAD(P)H-quinone oxidoreductase;protein_id=UUE99318.1;transl_table=11 CP098602.1 Genbank gene 1300778 1301014 . - . ID=gene-NDY24_05910;Name=NDY24_05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05910 CP098602.1 Protein Homology CDS 1300778 1301014 . - 0 ID=cds-UUE99319.1;Parent=gene-NDY24_05910;Dbxref=NCBI_GP:UUE99319.1;Name=UUE99319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812342.1;locus_tag=NDY24_05910;product=hypothetical protein;protein_id=UUE99319.1;transl_table=11 CP098602.1 Genbank gene 1301228 1302055 . + . ID=gene-NDY24_05915;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=NDY24_05915 CP098602.1 Protein Homology CDS 1301228 1302055 . + 0 ID=cds-UUE99320.1;Parent=gene-NDY24_05915;Dbxref=NCBI_GP:UUE99320.1;Name=UUE99320.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155379.1;locus_tag=NDY24_05915;product=methylenetetrahydrofolate reductase [NAD(P)H];protein_id=UUE99320.1;transl_table=11 CP098602.1 Genbank gene 1302197 1302856 . + . ID=gene-NDY24_05920;Name=NDY24_05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05920 CP098602.1 Protein Homology CDS 1302197 1302856 . + 0 ID=cds-UUF00295.1;Parent=gene-NDY24_05920;Dbxref=NCBI_GP:UUF00295.1;Name=UUF00295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118326.1;locus_tag=NDY24_05920;product=hypothetical protein;protein_id=UUF00295.1;transl_table=11 CP098602.1 Genbank gene 1303110 1303628 . - . ID=gene-NDY24_05925;Name=NDY24_05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05925 CP098602.1 Protein Homology CDS 1303110 1303628 . - 0 ID=cds-UUE99321.1;Parent=gene-NDY24_05925;Dbxref=NCBI_GP:UUE99321.1;Name=UUE99321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902195.1;locus_tag=NDY24_05925;product=AAA family ATPase;protein_id=UUE99321.1;transl_table=11 CP098602.1 Genbank gene 1303625 1304572 . - . ID=gene-NDY24_05930;Name=NDY24_05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05930 CP098602.1 Protein Homology CDS 1303625 1304572 . - 0 ID=cds-UUE99322.1;Parent=gene-NDY24_05930;Dbxref=NCBI_GP:UUE99322.1;Name=UUE99322.1;Ontology_term=GO:0008413;gbkey=CDS;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005910877.1;locus_tag=NDY24_05930;product=Nudix family hydrolase;protein_id=UUE99322.1;transl_table=11 CP098602.1 Genbank gene 1304722 1305087 . - . ID=gene-NDY24_05935;Name=NDY24_05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05935 CP098602.1 Protein Homology CDS 1304722 1305087 . - 0 ID=cds-UUE99323.1;Parent=gene-NDY24_05935;Dbxref=NCBI_GP:UUE99323.1;Name=UUE99323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448960.1;locus_tag=NDY24_05935;product=glyoxalase;protein_id=UUE99323.1;transl_table=11 CP098602.1 Genbank gene 1305289 1308027 . - . ID=gene-NDY24_05940;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=NDY24_05940 CP098602.1 Protein Homology CDS 1305289 1308027 . - 0 ID=cds-UUE99324.1;Parent=gene-NDY24_05940;Dbxref=NCBI_GP:UUE99324.1;Name=UUE99324.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112773.1;locus_tag=NDY24_05940;product=preprotein translocase subunit SecA;protein_id=UUE99324.1;transl_table=11 CP098602.1 Genbank gene 1308183 1309127 . - . ID=gene-NDY24_05945;Name=NDY24_05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05945 CP098602.1 Protein Homology CDS 1308183 1309127 . - 0 ID=cds-UUE99325.1;Parent=gene-NDY24_05945;Dbxref=NCBI_GP:UUE99325.1;Name=UUE99325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158828.1;locus_tag=NDY24_05945;product=M23 family metallopeptidase;protein_id=UUE99325.1;transl_table=11 CP098602.1 Genbank gene 1309128 1309574 . + . ID=gene-NDY24_05950;Name=NDY24_05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05950 CP098602.1 Protein Homology CDS 1309128 1309574 . + 0 ID=cds-UUE99326.1;Parent=gene-NDY24_05950;Dbxref=NCBI_GP:UUE99326.1;Name=UUE99326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571812.1;locus_tag=NDY24_05950;product=DUF721 domain-containing protein;protein_id=UUE99326.1;transl_table=11 CP098602.1 Genbank gene 1309761 1310672 . - . ID=gene-NDY24_05955;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=NDY24_05955 CP098602.1 Protein Homology CDS 1309761 1310672 . - 0 ID=cds-UUE99327.1;Parent=gene-NDY24_05955;Dbxref=NCBI_GP:UUE99327.1;Name=UUE99327.1;Ontology_term=GO:0009245,GO:0008759;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity|0008759||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237961.1;locus_tag=NDY24_05955;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=UUE99327.1;transl_table=11 CP098602.1 Genbank gene 1310908 1312146 . - . ID=gene-NDY24_05960;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=NDY24_05960 CP098602.1 Protein Homology CDS 1310908 1312146 . - 0 ID=cds-UUE99328.1;Parent=gene-NDY24_05960;Dbxref=NCBI_GP:UUE99328.1;Name=UUE99328.1;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017170527.1;locus_tag=NDY24_05960;product=cell division protein FtsZ;protein_id=UUE99328.1;transl_table=11 CP098602.1 Genbank gene 1312437 1313672 . - . ID=gene-NDY24_05965;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=NDY24_05965 CP098602.1 Protein Homology CDS 1312437 1313672 . - 0 ID=cds-UUE99329.1;Parent=gene-NDY24_05965;Dbxref=NCBI_GP:UUE99329.1;Name=UUE99329.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019398559.1;locus_tag=NDY24_05965;product=cell division protein FtsA;protein_id=UUE99329.1;transl_table=11 CP098602.1 Genbank gene 1313669 1314535 . - . ID=gene-NDY24_05970;Name=NDY24_05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05970 CP098602.1 Protein Homology CDS 1313669 1314535 . - 0 ID=cds-UUF00296.1;Parent=gene-NDY24_05970;Dbxref=NCBI_GP:UUF00296.1;Name=UUF00296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448954.1;locus_tag=NDY24_05970;product=cell division protein FtsQ/DivIB;protein_id=UUF00296.1;transl_table=11 CP098602.1 Genbank gene 1314618 1315574 . - . ID=gene-NDY24_05975;Name=NDY24_05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_05975 CP098602.1 Protein Homology CDS 1314618 1315574 . - 0 ID=cds-UUE99330.1;Parent=gene-NDY24_05975;Dbxref=NCBI_GP:UUE99330.1;Name=UUE99330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485275.1;locus_tag=NDY24_05975;product=D-alanine--D-alanine ligase;protein_id=UUE99330.1;transl_table=11 CP098602.1 Genbank gene 1315571 1317004 . - . ID=gene-NDY24_05980;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=NDY24_05980 CP098602.1 Protein Homology CDS 1315571 1317004 . - 0 ID=cds-UUE99331.1;Parent=gene-NDY24_05980;Dbxref=NCBI_GP:UUE99331.1;Name=UUE99331.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165008.1;locus_tag=NDY24_05980;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=UUE99331.1;transl_table=11 CP098602.1 Genbank gene 1317001 1318218 . - . ID=gene-NDY24_05985;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=NDY24_05985 CP098602.1 Protein Homology CDS 1317001 1318218 . - 0 ID=cds-UUE99332.1;Parent=gene-NDY24_05985;Dbxref=NCBI_GP:UUE99332.1;Name=UUE99332.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452810.1;locus_tag=NDY24_05985;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=UUE99332.1;transl_table=11 CP098602.1 Genbank gene 1318278 1319654 . - . ID=gene-NDY24_05990;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=NDY24_05990 CP098602.1 Protein Homology CDS 1318278 1319654 . - 0 ID=cds-UUE99333.1;Parent=gene-NDY24_05990;Dbxref=NCBI_GP:UUE99333.1;Name=UUE99333.1;Ontology_term=GO:0009252,GO:0051301,GO:0003674,GO:0016021;gbkey=CDS;gene=ftsW;go_component=integral component of membrane|0016021||IEA;go_function=molecular_function|0003674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155392.1;locus_tag=NDY24_05990;product=putative lipid II flippase FtsW;protein_id=UUE99333.1;transl_table=11 CP098602.1 Genbank gene 1319654 1320739 . - . ID=gene-NDY24_05995;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=NDY24_05995 CP098602.1 Protein Homology CDS 1319654 1320739 . - 0 ID=cds-UUE99334.1;Parent=gene-NDY24_05995;Dbxref=NCBI_GP:UUE99334.1;Name=UUE99334.1;Ontology_term=GO:0009252,GO:0008963;gbkey=CDS;gene=mraY;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452808.1;locus_tag=NDY24_05995;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=UUE99334.1;transl_table=11 CP098602.1 Genbank gene 1320729 1322222 . - . ID=gene-NDY24_06000;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=NDY24_06000 CP098602.1 Protein Homology CDS 1320729 1322222 . - 0 ID=cds-UUE99335.1;Parent=gene-NDY24_06000;Dbxref=NCBI_GP:UUE99335.1;Name=UUE99335.1;Ontology_term=GO:0009252,GO:0047480;gbkey=CDS;gene=murF;go_function=UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485287.1;locus_tag=NDY24_06000;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=UUE99335.1;transl_table=11 CP098602.1 Genbank gene 1322219 1323694 . - . ID=gene-NDY24_06005;Name=NDY24_06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06005 CP098602.1 Protein Homology CDS 1322219 1323694 . - 0 ID=cds-UUF00297.1;Parent=gene-NDY24_06005;Dbxref=NCBI_GP:UUF00297.1;Name=UUF00297.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005991588.1;locus_tag=NDY24_06005;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=UUF00297.1;transl_table=11 CP098602.1 Genbank gene 1323703 1325571 . - . ID=gene-NDY24_06010;Name=NDY24_06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06010 CP098602.1 Protein Homology CDS 1323703 1325571 . - 0 ID=cds-UUE99336.1;Parent=gene-NDY24_06010;Dbxref=NCBI_GP:UUE99336.1;Name=UUE99336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381784.1;locus_tag=NDY24_06010;product=penicillin-binding protein 2;protein_id=UUE99336.1;transl_table=11 CP098602.1 Genbank gene 1325780 1326043 . - . ID=gene-NDY24_06015;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=NDY24_06015 CP098602.1 Protein Homology CDS 1325780 1326043 . - 0 ID=cds-UUE99337.1;Parent=gene-NDY24_06015;Dbxref=NCBI_GP:UUE99337.1;Name=UUE99337.1;Ontology_term=GO:0000910,GO:0016021;gbkey=CDS;gene=ftsL;go_component=integral component of membrane|0016021||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010344441.1;locus_tag=NDY24_06015;product=cell division protein FtsL;protein_id=UUE99337.1;transl_table=11 CP098602.1 Genbank gene 1326040 1327098 . - . ID=gene-NDY24_06020;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=NDY24_06020 CP098602.1 Protein Homology CDS 1326040 1327098 . - 0 ID=cds-UUF00298.1;Parent=gene-NDY24_06020;Dbxref=NCBI_GP:UUF00298.1;Name=UUF00298.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903086.1;locus_tag=NDY24_06020;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=UUF00298.1;transl_table=11 CP098602.1 Genbank gene 1327113 1327568 . - . ID=gene-NDY24_06025;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=NDY24_06025 CP098602.1 Protein Homology CDS 1327113 1327568 . - 0 ID=cds-UUE99338.1;Parent=gene-NDY24_06025;Dbxref=NCBI_GP:UUE99338.1;Name=UUE99338.1;Ontology_term=GO:0051302,GO:0043565;gbkey=CDS;gene=mraZ;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of cell division|0051302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367651.1;locus_tag=NDY24_06025;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=UUE99338.1;transl_table=11 CP098602.1 Genbank gene 1327883 1328650 . + . ID=gene-NDY24_06030;Name=NDY24_06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06030 CP098602.1 Protein Homology CDS 1327883 1328650 . + 0 ID=cds-UUE99339.1;Parent=gene-NDY24_06030;Dbxref=NCBI_GP:UUE99339.1;Name=UUE99339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035954.1;locus_tag=NDY24_06030;product=NRDE family protein;protein_id=UUE99339.1;transl_table=11 CP098602.1 Genbank pseudogene 1328701 1328951 . + . ID=gene-NDY24_06035;Name=NDY24_06035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_06035;pseudo=true CP098602.1 Protein Homology CDS 1328701 1328951 . + 0 ID=cds-NDY24_06035;Parent=gene-NDY24_06035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988736.1;locus_tag=NDY24_06035;product=type II toxin-antitoxin system CcdA family antitoxin;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 1328948 1329264 . + . ID=gene-NDY24_06040;Name=NDY24_06040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_06040;pseudo=true CP098602.1 Protein Homology CDS 1328948 1329264 . + 0 ID=cds-NDY24_06040;Parent=gene-NDY24_06040;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367656.1;locus_tag=NDY24_06040;product=CcdB family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1329647 1329996 . - . ID=gene-NDY24_06045;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=NDY24_06045 CP098602.1 cmsearch RNase_P_RNA 1329647 1329996 . - . ID=rna-NDY24_06045;Parent=gene-NDY24_06045;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_06045;product=RNase P RNA component class A CP098602.1 cmsearch exon 1329647 1329996 . - . ID=exon-NDY24_06045-1;Parent=rna-NDY24_06045;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_06045;product=RNase P RNA component class A CP098602.1 Genbank gene 1330143 1330964 . - . ID=gene-NDY24_06050;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=NDY24_06050 CP098602.1 Protein Homology CDS 1330143 1330964 . - 0 ID=cds-UUE99340.1;Parent=gene-NDY24_06050;Dbxref=NCBI_GP:UUE99340.1;Name=UUE99340.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035951.1;locus_tag=NDY24_06050;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=UUE99340.1;transl_table=11 CP098602.1 Genbank gene 1331047 1332777 . + . ID=gene-NDY24_06055;Name=NDY24_06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06055 CP098602.1 Protein Homology CDS 1331047 1332777 . + 0 ID=cds-UUE99341.1;Parent=gene-NDY24_06055;Dbxref=NCBI_GP:UUE99341.1;Name=UUE99341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812401.1;locus_tag=NDY24_06055;product=penicillin-binding protein activator;protein_id=UUE99341.1;transl_table=11 CP098602.1 Genbank gene 1332782 1333150 . + . ID=gene-NDY24_06060;Name=NDY24_06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06060 CP098602.1 Protein Homology CDS 1332782 1333150 . + 0 ID=cds-UUE99342.1;Parent=gene-NDY24_06060;Dbxref=NCBI_GP:UUE99342.1;Name=UUE99342.1;Ontology_term=GO:0003676,GO:0004518;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571510.1;locus_tag=NDY24_06060;product=YraN family protein;protein_id=UUE99342.1;transl_table=11 CP098602.1 Genbank gene 1333167 1333706 . + . ID=gene-NDY24_06065;Name=NDY24_06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06065 CP098602.1 Protein Homology CDS 1333167 1333706 . + 0 ID=cds-UUE99343.1;Parent=gene-NDY24_06065;Dbxref=NCBI_GP:UUE99343.1;Name=UUE99343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005910944.1;locus_tag=NDY24_06065;product=metal-dependent hydrolase;protein_id=UUE99343.1;transl_table=11 CP098602.1 Genbank gene 1333703 1335091 . + . ID=gene-NDY24_06070;Name=NDY24_06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06070 CP098602.1 Protein Homology CDS 1333703 1335091 . + 0 ID=cds-UUE99344.1;Parent=gene-NDY24_06070;Dbxref=NCBI_GP:UUE99344.1;Name=UUE99344.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903093.1;locus_tag=NDY24_06070;product=FAD-binding protein;protein_id=UUE99344.1;transl_table=11 CP098602.1 Genbank gene 1335272 1335994 . - . ID=gene-NDY24_06075;Name=NDY24_06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06075 CP098602.1 Protein Homology CDS 1335272 1335994 . - 0 ID=cds-UUE99345.1;Parent=gene-NDY24_06075;Dbxref=NCBI_GP:UUE99345.1;Name=UUE99345.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012546.2;locus_tag=NDY24_06075;product=alpha/beta fold hydrolase;protein_id=UUE99345.1;transl_table=11 CP098602.1 Genbank gene 1336083 1337243 . - . ID=gene-NDY24_06080;Name=NDY24_06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06080 CP098602.1 GeneMarkS-2+ CDS 1336083 1337243 . - 0 ID=cds-UUE99346.1;Parent=gene-NDY24_06080;Dbxref=NCBI_GP:UUE99346.1;Name=UUE99346.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_06080;product=hypothetical protein;protein_id=UUE99346.1;transl_table=11 CP098602.1 Genbank gene 1337535 1338251 . - . ID=gene-NDY24_06085;Name=NDY24_06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06085 CP098602.1 Protein Homology CDS 1337535 1338251 . - 0 ID=cds-UUE99347.1;Parent=gene-NDY24_06085;Dbxref=NCBI_GP:UUE99347.1;Name=UUE99347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158836.1;locus_tag=NDY24_06085;product=response regulator transcription factor;protein_id=UUE99347.1;transl_table=11 CP098602.1 Genbank gene 1338241 1340901 . - . ID=gene-NDY24_06090;Name=NDY24_06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06090 CP098602.1 Protein Homology CDS 1338241 1340901 . - 0 ID=cds-UUE99348.1;Parent=gene-NDY24_06090;Dbxref=NCBI_GP:UUE99348.1;Name=UUE99348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849531.1;locus_tag=NDY24_06090;product=sensor histidine kinase KdpD;protein_id=UUE99348.1;transl_table=11 CP098602.1 Genbank gene 1340979 1341632 . - . ID=gene-NDY24_06095;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=NDY24_06095 CP098602.1 Protein Homology CDS 1340979 1341632 . - 0 ID=cds-UUE99349.1;Parent=gene-NDY24_06095;Dbxref=NCBI_GP:UUE99349.1;Name=UUE99349.1;Ontology_term=GO:0006813,GO:0008556,GO:0016021;gbkey=CDS;gene=kdpC;go_component=integral component of membrane|0016021||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019299903.1;locus_tag=NDY24_06095;product=potassium-transporting ATPase subunit KdpC;protein_id=UUE99349.1;transl_table=11 CP098602.1 Genbank gene 1341636 1343684 . - . ID=gene-NDY24_06100;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=NDY24_06100 CP098602.1 Protein Homology CDS 1341636 1343684 . - 0 ID=cds-UUE99350.1;Parent=gene-NDY24_06100;Dbxref=NCBI_GP:UUE99350.1;Name=UUE99350.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpB;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903098.1;locus_tag=NDY24_06100;product=potassium-transporting ATPase subunit KdpB;protein_id=UUE99350.1;transl_table=11 CP098602.1 Genbank gene 1343697 1345511 . - . ID=gene-NDY24_06105;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=NDY24_06105 CP098602.1 Protein Homology CDS 1343697 1345511 . - 0 ID=cds-UUE99351.1;Parent=gene-NDY24_06105;Dbxref=NCBI_GP:UUE99351.1;Name=UUE99351.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490514.1;locus_tag=NDY24_06105;product=potassium-transporting ATPase subunit KdpA;protein_id=UUE99351.1;transl_table=11 CP098602.1 Genbank gene 1345527 1345619 . - . ID=gene-NDY24_06110;Name=NDY24_06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06110 CP098602.1 Protein Homology CDS 1345527 1345619 . - 0 ID=cds-UUE99352.1;Parent=gene-NDY24_06110;Dbxref=NCBI_GP:UUE99352.1;Name=UUE99352.1;Ontology_term=GO:0043462,GO:0008556,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=regulation of ATP-dependent activity|0043462||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452907.1;locus_tag=NDY24_06110;product=potassium-transporting ATPase subunit F;protein_id=UUE99352.1;transl_table=11 CP098602.1 Genbank gene 1346536 1348116 . - . ID=gene-NDY24_06115;Name=NDY24_06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06115 CP098602.1 Protein Homology CDS 1346536 1348116 . - 0 ID=cds-UUE99353.1;Parent=gene-NDY24_06115;Dbxref=NCBI_GP:UUE99353.1;Name=UUE99353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171772.1;locus_tag=NDY24_06115;product=X-Pro dipeptidyl-peptidase;protein_id=UUE99353.1;transl_table=11 CP098602.1 Genbank gene 1348590 1349564 . - . ID=gene-NDY24_06120;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=NDY24_06120 CP098602.1 Protein Homology CDS 1348590 1349564 . - 0 ID=cds-UUE99354.1;Parent=gene-NDY24_06120;Dbxref=NCBI_GP:UUE99354.1;Name=UUE99354.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005925283.1;locus_tag=NDY24_06120;product=thiamine-phosphate kinase;protein_id=UUE99354.1;transl_table=11 CP098602.1 Genbank gene 1349675 1350154 . - . ID=gene-NDY24_06125;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=NDY24_06125 CP098602.1 Protein Homology CDS 1349675 1350154 . - 0 ID=cds-UUE99355.1;Parent=gene-NDY24_06125;Dbxref=NCBI_GP:UUE99355.1;Name=UUE99355.1;Ontology_term=GO:0006355;gbkey=CDS;gene=nusB;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035937.1;locus_tag=NDY24_06125;product=transcription antitermination factor NusB;protein_id=UUE99355.1;transl_table=11 CP098602.1 Genbank gene 1350151 1350615 . - . ID=gene-NDY24_06130;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=NDY24_06130 CP098602.1 Protein Homology CDS 1350151 1350615 . - 0 ID=cds-UUE99356.1;Parent=gene-NDY24_06130;Dbxref=NCBI_GP:UUE99356.1;Name=UUE99356.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409394.1;locus_tag=NDY24_06130;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=UUE99356.1;transl_table=11 CP098602.1 Genbank gene 1350794 1350869 . + . ID=gene-NDY24_06135;Name=NDY24_06135;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_06135 CP098602.1 cmsearch ncRNA 1350794 1350869 . + . ID=rna-NDY24_06135;Parent=gene-NDY24_06135;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_06135;product=sX9 sRNA CP098602.1 cmsearch exon 1350794 1350869 . + . ID=exon-NDY24_06135-1;Parent=rna-NDY24_06135;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_06135;product=sX9 sRNA CP098602.1 Genbank gene 1350874 1352013 . - . ID=gene-NDY24_06140;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=NDY24_06140 CP098602.1 Protein Homology CDS 1350874 1352013 . - 0 ID=cds-UUE99357.1;Parent=gene-NDY24_06140;Dbxref=NCBI_GP:UUE99357.1;Name=UUE99357.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089378.1;locus_tag=NDY24_06140;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=UUE99357.1;transl_table=11 CP098602.1 Genbank gene 1352010 1352612 . - . ID=gene-NDY24_06145;Name=NDY24_06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06145 CP098602.1 Protein Homology CDS 1352010 1352612 . - 0 ID=cds-UUE99358.1;Parent=gene-NDY24_06145;Dbxref=NCBI_GP:UUE99358.1;Name=UUE99358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576782.1;locus_tag=NDY24_06145;product=riboflavin synthase;protein_id=UUE99358.1;transl_table=11 CP098602.1 cmsearch riboswitch 1352775 1352953 . - . ID=id-CP098602.1:1352775..1352953;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP098602.1 Genbank gene 1353171 1353794 . + . ID=gene-NDY24_06150;Name=NDY24_06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06150 CP098602.1 Protein Homology CDS 1353171 1353794 . + 0 ID=cds-UUE99359.1;Parent=gene-NDY24_06150;Dbxref=NCBI_GP:UUE99359.1;Name=UUE99359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035933.1;locus_tag=NDY24_06150;product=hypothetical protein;protein_id=UUE99359.1;transl_table=11 CP098602.1 Genbank gene 1354716 1355810 . - . ID=gene-NDY24_06155;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=NDY24_06155 CP098602.1 Protein Homology CDS 1354716 1355810 . - 0 ID=cds-UUE99360.1;Parent=gene-NDY24_06155;Dbxref=NCBI_GP:UUE99360.1;Name=UUE99360.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453214.1;locus_tag=NDY24_06155;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=UUE99360.1;transl_table=11 CP098602.1 Genbank gene 1355807 1356292 . - . ID=gene-NDY24_06160;Name=NDY24_06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06160 CP098602.1 Protein Homology CDS 1355807 1356292 . - 0 ID=cds-UUE99361.1;Parent=gene-NDY24_06160;Dbxref=NCBI_GP:UUE99361.1;Name=UUE99361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453215.1;locus_tag=NDY24_06160;product=GNAT family N-acetyltransferase;protein_id=UUE99361.1;transl_table=11 CP098602.1 Genbank gene 1356289 1356807 . - . ID=gene-NDY24_06165;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=NDY24_06165 CP098602.1 Protein Homology CDS 1356289 1356807 . - 0 ID=cds-UUF00299.1;Parent=gene-NDY24_06165;Dbxref=NCBI_GP:UUF00299.1;Name=UUF00299.1;Ontology_term=GO:0006355,GO:0140110;gbkey=CDS;gene=nrdR;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453216.1;locus_tag=NDY24_06165;product=transcriptional regulator NrdR;protein_id=UUF00299.1;transl_table=11 CP098602.1 Genbank gene 1356914 1358182 . - . ID=gene-NDY24_06170;Name=NDY24_06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06170 CP098602.1 Protein Homology CDS 1356914 1358182 . - 0 ID=cds-UUE99362.1;Parent=gene-NDY24_06170;Dbxref=NCBI_GP:UUE99362.1;Name=UUE99362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260263.1;locus_tag=NDY24_06170;product=serine hydroxymethyltransferase;protein_id=UUE99362.1;transl_table=11 CP098602.1 Genbank pseudogene 1358382 1358882 . - . ID=gene-NDY24_06175;Name=NDY24_06175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_06175;pseudo=true CP098602.1 Protein Homology CDS 1358382 1358882 . - 0 ID=cds-NDY24_06175;Parent=gene-NDY24_06175;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156712.1;locus_tag=NDY24_06175;product=RcnB family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1359107 1360768 . + . ID=gene-NDY24_06180;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=NDY24_06180 CP098602.1 Protein Homology CDS 1359107 1360768 . + 0 ID=cds-UUE99363.1;Parent=gene-NDY24_06180;Dbxref=NCBI_GP:UUE99363.1;Name=UUE99363.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346396.1;locus_tag=NDY24_06180;product=energy-dependent translational throttle protein EttA;protein_id=UUE99363.1;transl_table=11 CP098602.1 Genbank gene 1360945 1361460 . - . ID=gene-NDY24_06185;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=NDY24_06185 CP098602.1 Protein Homology CDS 1360945 1361460 . - 0 ID=cds-UUE99364.1;Parent=gene-NDY24_06185;Dbxref=NCBI_GP:UUE99364.1;Name=UUE99364.1;Ontology_term=GO:0006464,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=cellular protein modification process|0006464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303679.1;locus_tag=NDY24_06185;product=peptide deformylase;protein_id=UUE99364.1;transl_table=11 CP098602.1 Genbank gene 1362115 1362528 . + . ID=gene-NDY24_06190;Name=NDY24_06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06190 CP098602.1 Protein Homology CDS 1362115 1362528 . + 0 ID=cds-UUE99365.1;Parent=gene-NDY24_06190;Dbxref=NCBI_GP:UUE99365.1;Name=UUE99365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091040.1;locus_tag=NDY24_06190;product=hypothetical protein;protein_id=UUE99365.1;transl_table=11 CP098602.1 Genbank gene 1362521 1364179 . + . ID=gene-NDY24_06195;Name=NDY24_06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06195 CP098602.1 Protein Homology CDS 1362521 1364179 . + 0 ID=cds-UUE99366.1;Parent=gene-NDY24_06195;Dbxref=NCBI_GP:UUE99366.1;Name=UUE99366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381866.1;locus_tag=NDY24_06195;product=serine protease;protein_id=UUE99366.1;transl_table=11 CP098602.1 Genbank gene 1364241 1365422 . - . ID=gene-NDY24_06200;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=NDY24_06200 CP098602.1 Protein Homology CDS 1364241 1365422 . - 0 ID=cds-UUE99367.1;Parent=gene-NDY24_06200;Dbxref=NCBI_GP:UUE99367.1;Name=UUE99367.1;Ontology_term=GO:0019358,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=nicotinate nucleotide salvage|0019358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367736.1;locus_tag=NDY24_06200;product=nicotinate phosphoribosyltransferase;protein_id=UUE99367.1;transl_table=11 CP098602.1 Genbank gene 1365595 1366563 . - . ID=gene-NDY24_06205;Name=NDY24_06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06205 CP098602.1 Protein Homology CDS 1365595 1366563 . - 0 ID=cds-UUE99368.1;Parent=gene-NDY24_06205;Dbxref=NCBI_GP:UUE99368.1;Name=UUE99368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490750.1;locus_tag=NDY24_06205;product=glycosidase-like protein;protein_id=UUE99368.1;transl_table=11 CP098602.1 Genbank gene 1366545 1367849 . - . ID=gene-NDY24_06210;Name=NDY24_06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06210 CP098602.1 Protein Homology CDS 1366545 1367849 . - 0 ID=cds-UUE99369.1;Parent=gene-NDY24_06210;Dbxref=NCBI_GP:UUE99369.1;Name=UUE99369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165465.1;locus_tag=NDY24_06210;product=hypothetical protein;protein_id=UUE99369.1;transl_table=11 CP098602.1 Genbank gene 1367899 1369806 . - . ID=gene-NDY24_06215;Name=NDY24_06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06215 CP098602.1 Protein Homology CDS 1367899 1369806 . - 0 ID=cds-UUE99370.1;Parent=gene-NDY24_06215;Dbxref=NCBI_GP:UUE99370.1;Name=UUE99370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367740.1;locus_tag=NDY24_06215;product=glycosyltransferase;protein_id=UUE99370.1;transl_table=11 CP098602.1 Genbank gene 1369819 1370733 . - . ID=gene-NDY24_06220;Name=NDY24_06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06220 CP098602.1 Protein Homology CDS 1369819 1370733 . - 0 ID=cds-UUF00300.1;Parent=gene-NDY24_06220;Dbxref=NCBI_GP:UUF00300.1;Name=UUF00300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003475856.1;locus_tag=NDY24_06220;product=hypothetical protein;protein_id=UUF00300.1;transl_table=11 CP098602.1 Genbank gene 1370984 1371823 . - . ID=gene-NDY24_06225;Name=NDY24_06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06225 CP098602.1 Protein Homology CDS 1370984 1371823 . - 0 ID=cds-UUE99371.1;Parent=gene-NDY24_06225;Dbxref=NCBI_GP:UUE99371.1;Name=UUE99371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174042.1;locus_tag=NDY24_06225;product=glycosyltransferase family 2 protein;protein_id=UUE99371.1;transl_table=11 CP098602.1 Genbank gene 1372221 1373378 . + . ID=gene-NDY24_06230;Name=NDY24_06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06230 CP098602.1 Protein Homology CDS 1372221 1373378 . + 0 ID=cds-UUE99372.1;Parent=gene-NDY24_06230;Dbxref=NCBI_GP:UUE99372.1;Name=UUE99372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300523.1;locus_tag=NDY24_06230;product=aminoglycoside phosphotransferase family protein;protein_id=UUE99372.1;transl_table=11 CP098602.1 Genbank gene 1373411 1375579 . + . ID=gene-NDY24_06235;Name=NDY24_06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06235 CP098602.1 Protein Homology CDS 1373411 1375579 . + 0 ID=cds-UUE99373.1;Parent=gene-NDY24_06235;Dbxref=NCBI_GP:UUE99373.1;Name=UUE99373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004429142.1;locus_tag=NDY24_06235;product=TonB-dependent receptor;protein_id=UUE99373.1;transl_table=11 CP098602.1 Genbank gene 1375815 1376390 . + . ID=gene-NDY24_06240;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=NDY24_06240 CP098602.1 Protein Homology CDS 1375815 1376390 . + 0 ID=cds-UUE99374.1;Parent=gene-NDY24_06240;Dbxref=NCBI_GP:UUE99374.1;Name=UUE99374.1;Ontology_term=GO:0015890,GO:0015663,GO:0016021;gbkey=CDS;gene=pnuC;go_component=integral component of membrane|0016021||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450724.1;locus_tag=NDY24_06240;product=nicotinamide riboside transporter PnuC;protein_id=UUE99374.1;transl_table=11 CP098602.1 Genbank gene 1376496 1377224 . + . ID=gene-NDY24_06245;Name=NDY24_06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06245 CP098602.1 Protein Homology CDS 1376496 1377224 . + 0 ID=cds-UUE99375.1;Parent=gene-NDY24_06245;Dbxref=NCBI_GP:UUE99375.1;Name=UUE99375.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450725.1;locus_tag=NDY24_06245;product=UTRA domain-containing protein;protein_id=UUE99375.1;transl_table=11 CP098602.1 Genbank gene 1377634 1377725 . - . ID=gene-NDY24_06250;Name=NDY24_06250;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_06250 CP098602.1 cmsearch ncRNA 1377634 1377725 . - . ID=rna-NDY24_06250;Parent=gene-NDY24_06250;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_06250;product=sX9 sRNA CP098602.1 cmsearch exon 1377634 1377725 . - . ID=exon-NDY24_06250-1;Parent=rna-NDY24_06250;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_06250;product=sX9 sRNA CP098602.1 Genbank gene 1377785 1378624 . - . ID=gene-NDY24_06255;Name=NDY24_06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06255 CP098602.1 Protein Homology CDS 1377785 1378624 . - 0 ID=cds-UUE99376.1;Parent=gene-NDY24_06255;Dbxref=NCBI_GP:UUE99376.1;Name=UUE99376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901897.1;locus_tag=NDY24_06255;product=glycosyltransferase;protein_id=UUE99376.1;transl_table=11 CP098602.1 Genbank gene 1378621 1380948 . - . ID=gene-NDY24_06260;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=NDY24_06260 CP098602.1 Protein Homology CDS 1378621 1380948 . - 0 ID=cds-UUE99377.1;Parent=gene-NDY24_06260;Dbxref=NCBI_GP:UUE99377.1;Name=UUE99377.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367762.1;locus_tag=NDY24_06260;product=type II secretion system secretin GspD;protein_id=UUE99377.1;transl_table=11 CP098602.1 Genbank gene 1380945 1381727 . - . ID=gene-NDY24_06265;Name=NDY24_06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06265 CP098602.1 Protein Homology CDS 1380945 1381727 . - 0 ID=cds-UUE99378.1;Parent=gene-NDY24_06265;Dbxref=NCBI_GP:UUE99378.1;Name=UUE99378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035909.1;locus_tag=NDY24_06265;product=general secretion pathway protein GspN;protein_id=UUE99378.1;transl_table=11 CP098602.1 Genbank gene 1381717 1382370 . - . ID=gene-NDY24_06270;Name=gspM;gbkey=Gene;gene=gspM;gene_biotype=protein_coding;locus_tag=NDY24_06270 CP098602.1 Protein Homology CDS 1381717 1382370 . - 0 ID=cds-UUE99379.1;Parent=gene-NDY24_06270;Dbxref=NCBI_GP:UUE99379.1;Name=UUE99379.1;gbkey=CDS;gene=gspM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114570.1;locus_tag=NDY24_06270;product=type II secretion system protein GspM;protein_id=UUE99379.1;transl_table=11 CP098602.1 Genbank gene 1382354 1383475 . - . ID=gene-NDY24_06275;Name=NDY24_06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06275 CP098602.1 Protein Homology CDS 1382354 1383475 . - 0 ID=cds-UUE99380.1;Parent=gene-NDY24_06275;Dbxref=NCBI_GP:UUE99380.1;Name=UUE99380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504586.1;locus_tag=NDY24_06275;product=PilN domain-containing protein;protein_id=UUE99380.1;transl_table=11 CP098602.1 Genbank gene 1383472 1384323 . - . ID=gene-NDY24_06280;Name=NDY24_06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06280 CP098602.1 Protein Homology CDS 1383472 1384323 . - 0 ID=cds-UUE99381.1;Parent=gene-NDY24_06280;Dbxref=NCBI_GP:UUE99381.1;Name=UUE99381.1;Ontology_term=GO:0009306,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158144.1;locus_tag=NDY24_06280;product=type II secretion system protein GspK;protein_id=UUE99381.1;transl_table=11 CP098602.1 Genbank gene 1384320 1384955 . - . ID=gene-NDY24_06285;Name=NDY24_06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06285 CP098602.1 Protein Homology CDS 1384320 1384955 . - 0 ID=cds-UUE99382.1;Parent=gene-NDY24_06285;Dbxref=NCBI_GP:UUE99382.1;Name=UUE99382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446065.1;locus_tag=NDY24_06285;product=type II secretion system protein J;protein_id=UUE99382.1;transl_table=11 CP098602.1 Genbank gene 1384952 1385386 . - . ID=gene-NDY24_06290;Name=NDY24_06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06290 CP098602.1 Protein Homology CDS 1384952 1385386 . - 0 ID=cds-UUF00301.1;Parent=gene-NDY24_06290;Dbxref=NCBI_GP:UUF00301.1;Name=UUF00301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450111.1;locus_tag=NDY24_06290;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=UUF00301.1;transl_table=11 CP098602.1 Genbank gene 1385341 1385874 . - . ID=gene-NDY24_06295;Name=NDY24_06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06295 CP098602.1 Protein Homology CDS 1385341 1385874 . - 0 ID=cds-UUE99383.1;Parent=gene-NDY24_06295;Dbxref=NCBI_GP:UUE99383.1;Name=UUE99383.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920744.1;locus_tag=NDY24_06295;product=GspH/FimT family pseudopilin;protein_id=UUE99383.1;transl_table=11 CP098602.1 Genbank gene 1385885 1386265 . - . ID=gene-NDY24_06300;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=NDY24_06300 CP098602.1 Protein Homology CDS 1385885 1386265 . - 0 ID=cds-UUF00302.1;Parent=gene-NDY24_06300;Dbxref=NCBI_GP:UUF00302.1;Name=UUF00302.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017357535.1;locus_tag=NDY24_06300;product=type II secretion system major pseudopilin GspG;protein_id=UUF00302.1;transl_table=11 CP098602.1 Genbank gene 1386440 1387654 . - . ID=gene-NDY24_06305;Name=NDY24_06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06305 CP098602.1 Protein Homology CDS 1386440 1387654 . - 0 ID=cds-UUE99384.1;Parent=gene-NDY24_06305;Dbxref=NCBI_GP:UUE99384.1;Name=UUE99384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504592.1;locus_tag=NDY24_06305;product=type II secretion system F family protein;protein_id=UUE99384.1;transl_table=11 CP098602.1 Genbank gene 1387830 1389557 . - . ID=gene-NDY24_06310;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=NDY24_06310 CP098602.1 Protein Homology CDS 1387830 1389557 . - 0 ID=cds-UUE99385.1;Parent=gene-NDY24_06310;Dbxref=NCBI_GP:UUE99385.1;Name=UUE99385.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237945.1;locus_tag=NDY24_06310;product=type II secretion system ATPase GspE;protein_id=UUE99385.1;transl_table=11 CP098602.1 Genbank pseudogene 1389687 1391567 . - . ID=gene-NDY24_06315;Name=NDY24_06315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_06315;pseudo=true CP098602.1 Protein Homology CDS 1389687 1391567 . - 0 ID=cds-NDY24_06315;Parent=gene-NDY24_06315;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920748.1;locus_tag=NDY24_06315;product=S8 family serine peptidase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1391796 1398356 . - . ID=gene-NDY24_06320;Name=NDY24_06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06320 CP098602.1 Protein Homology CDS 1391796 1398356 . - 0 ID=cds-UUE99386.1;Parent=gene-NDY24_06320;Dbxref=NCBI_GP:UUE99386.1;Name=UUE99386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113272.1;locus_tag=NDY24_06320;product=hypothetical protein;protein_id=UUE99386.1;transl_table=11 CP098602.1 Genbank pseudogene 1398901 1400786 . - . ID=gene-NDY24_06325;Name=NDY24_06325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_06325;pseudo=true CP098602.1 Protein Homology CDS 1398901 1400786 . - 0 ID=cds-NDY24_06325;Parent=gene-NDY24_06325;Note=frameshifted;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172353.1;locus_tag=NDY24_06325;product=S8 family serine peptidase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1400879 1404742 . - . ID=gene-NDY24_06330;Name=NDY24_06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06330 CP098602.1 Protein Homology CDS 1400879 1404742 . - 0 ID=cds-UUF00303.1;Parent=gene-NDY24_06330;Dbxref=NCBI_GP:UUF00303.1;Name=UUF00303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902878.1;locus_tag=NDY24_06330;product=YadA-like family protein;protein_id=UUF00303.1;transl_table=11 CP098602.1 Genbank gene 1404644 1404877 . + . ID=gene-NDY24_06335;Name=NDY24_06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06335 CP098602.1 GeneMarkS-2+ CDS 1404644 1404877 . + 0 ID=cds-UUF00533.1;Parent=gene-NDY24_06335;Dbxref=NCBI_GP:UUF00533.1;Name=UUF00533.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_06335;product=hypothetical protein;protein_id=UUF00533.1;transl_table=11 CP098602.1 Genbank gene 1405607 1409653 . - . ID=gene-NDY24_06340;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=NDY24_06340 CP098602.1 Protein Homology CDS 1405607 1409653 . - 0 ID=cds-UUE99387.1;Parent=gene-NDY24_06340;Dbxref=NCBI_GP:UUE99387.1;Name=UUE99387.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367790.1;locus_tag=NDY24_06340;product=phosphoribosylformylglycinamidine synthase;protein_id=UUE99387.1;transl_table=11 CP098602.1 Genbank gene 1409872 1410669 . - . ID=gene-NDY24_06345;Name=NDY24_06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06345 CP098602.1 Protein Homology CDS 1409872 1410669 . - 0 ID=cds-UUE99388.1;Parent=gene-NDY24_06345;Dbxref=NCBI_GP:UUE99388.1;Name=UUE99388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490215.1;locus_tag=NDY24_06345;product=DsbC family protein;protein_id=UUE99388.1;transl_table=11 CP098602.1 Genbank gene 1410874 1411845 . - . ID=gene-NDY24_06350;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=NDY24_06350 CP098602.1 Protein Homology CDS 1410874 1411845 . - 0 ID=cds-UUE99389.1;Parent=gene-NDY24_06350;Dbxref=NCBI_GP:UUE99389.1;Name=UUE99389.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005932805.1;locus_tag=NDY24_06350;product=site-specific tyrosine recombinase XerD;protein_id=UUE99389.1;transl_table=11 CP098602.1 Genbank gene 1412105 1412572 . + . ID=gene-NDY24_06355;Name=NDY24_06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06355 CP098602.1 Protein Homology CDS 1412105 1412572 . + 0 ID=cds-UUF00304.1;Parent=gene-NDY24_06355;Dbxref=NCBI_GP:UUF00304.1;Name=UUF00304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303262.1;locus_tag=NDY24_06355;product=RDD family protein;protein_id=UUF00304.1;transl_table=11 CP098602.1 Genbank gene 1412775 1413881 . - . ID=gene-NDY24_06360;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=NDY24_06360 CP098602.1 Protein Homology CDS 1412775 1413881 . - 0 ID=cds-UUE99390.1;Parent=gene-NDY24_06360;Dbxref=NCBI_GP:UUE99390.1;Name=UUE99390.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptG;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964177.1;locus_tag=NDY24_06360;product=LPS export ABC transporter permease LptG;protein_id=UUE99390.1;transl_table=11 CP098602.1 Genbank gene 1413878 1414960 . - . ID=gene-NDY24_06365;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=NDY24_06365 CP098602.1 Protein Homology CDS 1413878 1414960 . - 0 ID=cds-UUE99391.1;Parent=gene-NDY24_06365;Dbxref=NCBI_GP:UUE99391.1;Name=UUE99391.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptF;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052356.1;locus_tag=NDY24_06365;product=LPS export ABC transporter permease LptF;protein_id=UUE99391.1;transl_table=11 CP098602.1 Genbank gene 1415068 1416552 . + . ID=gene-NDY24_06370;Name=NDY24_06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06370 CP098602.1 Protein Homology CDS 1415068 1416552 . + 0 ID=cds-UUE99392.1;Parent=gene-NDY24_06370;Dbxref=NCBI_GP:UUE99392.1;Name=UUE99392.1;Ontology_term=GO:0019538,GO:0070006;gbkey=CDS;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017911113.1;locus_tag=NDY24_06370;product=leucyl aminopeptidase;protein_id=UUE99392.1;transl_table=11 CP098602.1 Genbank gene 1416674 1417099 . + . ID=gene-NDY24_06375;Name=NDY24_06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06375 CP098602.1 Protein Homology CDS 1416674 1417099 . + 0 ID=cds-UUE99393.1;Parent=gene-NDY24_06375;Dbxref=NCBI_GP:UUE99393.1;Name=UUE99393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902887.1;locus_tag=NDY24_06375;product=DNA polymerase III subunit chi;protein_id=UUE99393.1;transl_table=11 CP098602.1 Genbank pseudogene 1417192 1420269 . + . ID=gene-NDY24_06380;Name=NDY24_06380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_06380;pseudo=true CP098602.1 Protein Homology CDS 1417192 1420269 . + 0 ID=cds-NDY24_06380;Parent=gene-NDY24_06380;Note=frameshifted;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159789.1;locus_tag=NDY24_06380;product=valine--tRNA ligase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 1421237 1421426 . - . ID=gene-NDY24_06385;Name=NDY24_06385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_06385;pseudo=true CP098602.1 Protein Homology CDS 1421237 1421426 . - 0 ID=cds-NDY24_06385;Parent=gene-NDY24_06385;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159791.1;locus_tag=NDY24_06385;product=pectate lyase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1421598 1422740 . - . ID=gene-NDY24_06390;Name=NDY24_06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06390 CP098602.1 Protein Homology CDS 1421598 1422740 . - 0 ID=cds-UUE99394.1;Parent=gene-NDY24_06390;Dbxref=NCBI_GP:UUE99394.1;Name=UUE99394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035887.1;locus_tag=NDY24_06390;product=pectate lyase;protein_id=UUE99394.1;transl_table=11 CP098602.1 Genbank gene 1422992 1424125 . - . ID=gene-NDY24_06395;Name=NDY24_06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06395 CP098602.1 Protein Homology CDS 1422992 1424125 . - 0 ID=cds-UUE99395.1;Parent=gene-NDY24_06395;Dbxref=NCBI_GP:UUE99395.1;Name=UUE99395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159791.1;locus_tag=NDY24_06395;product=pectate lyase;protein_id=UUE99395.1;transl_table=11 CP098602.1 Genbank gene 1424578 1424793 . - . ID=gene-NDY24_06400;Name=NDY24_06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06400 CP098602.1 GeneMarkS-2+ CDS 1424578 1424793 . - 0 ID=cds-UUE99396.1;Parent=gene-NDY24_06400;Dbxref=NCBI_GP:UUE99396.1;Name=UUE99396.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_06400;product=hypothetical protein;protein_id=UUE99396.1;transl_table=11 CP098602.1 Genbank gene 1424910 1425392 . - . ID=gene-NDY24_06405;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=NDY24_06405 CP098602.1 Protein Homology CDS 1424910 1425392 . - 0 ID=cds-UUE99397.1;Parent=gene-NDY24_06405;Dbxref=NCBI_GP:UUE99397.1;Name=UUE99397.1;Ontology_term=GO:0006464,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=ribosomal protein S5-alanine N-acetyltransferase activity|0008999||IEA;go_process=cellular protein modification process|0006464||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019768432.1;locus_tag=NDY24_06405;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=UUE99397.1;transl_table=11 CP098602.1 Genbank gene 1425389 1425841 . - . ID=gene-NDY24_06410;Name=NDY24_06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06410 CP098602.1 Protein Homology CDS 1425389 1425841 . - 0 ID=cds-UUF00305.1;Parent=gene-NDY24_06410;Dbxref=NCBI_GP:UUF00305.1;Name=UUF00305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167047.1;locus_tag=NDY24_06410;product=alanine acetyltransferase;protein_id=UUF00305.1;transl_table=11 CP098602.1 Genbank gene 1425893 1426666 . - . ID=gene-NDY24_06415;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=NDY24_06415 CP098602.1 Protein Homology CDS 1425893 1426666 . - 0 ID=cds-UUE99398.1;Parent=gene-NDY24_06415;Dbxref=NCBI_GP:UUE99398.1;Name=UUE99398.1;Ontology_term=GO:0008654,GO:0003882;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-serine O-phosphatidyltransferase activity|0003882||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005991773.1;locus_tag=NDY24_06415;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=UUE99398.1;transl_table=11 CP098602.1 Genbank gene 1426800 1427204 . + . ID=gene-NDY24_06420;Name=NDY24_06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06420 CP098602.1 Protein Homology CDS 1426800 1427204 . + 0 ID=cds-UUE99399.1;Parent=gene-NDY24_06420;Dbxref=NCBI_GP:UUE99399.1;Name=UUE99399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157648.1;locus_tag=NDY24_06420;product=DUF4124 domain-containing protein;protein_id=UUE99399.1;transl_table=11 CP098602.1 Genbank gene 1427209 1427287 . - . ID=gene-NDY24_06425;Name=NDY24_06425;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_06425 CP098602.1 cmsearch ncRNA 1427209 1427287 . - . ID=rna-NDY24_06425;Parent=gene-NDY24_06425;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_06425;product=sX9 sRNA CP098602.1 cmsearch exon 1427209 1427287 . - . ID=exon-NDY24_06425-1;Parent=rna-NDY24_06425;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_06425;product=sX9 sRNA CP098602.1 Genbank gene 1427599 1429293 . + . ID=gene-NDY24_06430;Name=NDY24_06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06430 CP098602.1 Protein Homology CDS 1427599 1429293 . + 0 ID=cds-UUE99400.1;Parent=gene-NDY24_06430;Dbxref=NCBI_GP:UUE99400.1;Name=UUE99400.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA editing activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902894.1;locus_tag=NDY24_06430;product=proline--tRNA ligase;protein_id=UUE99400.1;transl_table=11 CP098602.1 Genbank gene 1429438 1429902 . + . ID=gene-NDY24_06435;Name=NDY24_06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06435 CP098602.1 Protein Homology CDS 1429438 1429902 . + 0 ID=cds-UUE99401.1;Parent=gene-NDY24_06435;Dbxref=NCBI_GP:UUE99401.1;Name=UUE99401.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007970417.1;locus_tag=NDY24_06435;product=H-NS histone family protein;protein_id=UUE99401.1;transl_table=11 CP098602.1 Genbank gene 1429962 1431221 . - . ID=gene-NDY24_06440;Name=NDY24_06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06440 CP098602.1 Protein Homology CDS 1429962 1431221 . - 0 ID=cds-UUE99402.1;Parent=gene-NDY24_06440;Dbxref=NCBI_GP:UUE99402.1;Name=UUE99402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506577.1;locus_tag=NDY24_06440;product=threonine/serine exporter family protein;protein_id=UUE99402.1;transl_table=11 CP098602.1 Genbank gene 1431425 1432537 . + . ID=gene-NDY24_06445;Name=NDY24_06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06445 CP098602.1 Protein Homology CDS 1431425 1432537 . + 0 ID=cds-UUE99403.1;Parent=gene-NDY24_06445;Dbxref=NCBI_GP:UUE99403.1;Name=UUE99403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002813964.1;locus_tag=NDY24_06445;product=ABC transporter permease;protein_id=UUE99403.1;transl_table=11 CP098602.1 Genbank gene 1432631 1433467 . + . ID=gene-NDY24_06450;Name=NDY24_06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06450 CP098602.1 Protein Homology CDS 1432631 1433467 . + 0 ID=cds-UUE99404.1;Parent=gene-NDY24_06450;Dbxref=NCBI_GP:UUE99404.1;Name=UUE99404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007969506.1;locus_tag=NDY24_06450;product=ABC transporter ATP-binding protein;protein_id=UUE99404.1;transl_table=11 CP098602.1 Genbank gene 1433470 1434396 . + . ID=gene-NDY24_06455;Name=NDY24_06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06455 CP098602.1 Protein Homology CDS 1433470 1434396 . + 0 ID=cds-UUE99405.1;Parent=gene-NDY24_06455;Dbxref=NCBI_GP:UUE99405.1;Name=UUE99405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903957.1;locus_tag=NDY24_06455;product=MCE family protein;protein_id=UUE99405.1;transl_table=11 CP098602.1 Genbank gene 1434393 1435037 . + . ID=gene-NDY24_06460;Name=NDY24_06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06460 CP098602.1 Protein Homology CDS 1434393 1435037 . + 0 ID=cds-UUE99406.1;Parent=gene-NDY24_06460;Dbxref=NCBI_GP:UUE99406.1;Name=UUE99406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257687.1;locus_tag=NDY24_06460;product=ABC-type transport auxiliary lipoprotein family protein;protein_id=UUE99406.1;transl_table=11 CP098602.1 Genbank gene 1435060 1435136 . - . ID=gene-NDY24_06465;Name=NDY24_06465;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_06465 CP098602.1 cmsearch ncRNA 1435060 1435136 . - . ID=rna-NDY24_06465;Parent=gene-NDY24_06465;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_06465;product=sX9 sRNA CP098602.1 cmsearch exon 1435060 1435136 . - . ID=exon-NDY24_06465-1;Parent=rna-NDY24_06465;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_06465;product=sX9 sRNA CP098602.1 Genbank gene 1435667 1436275 . - . ID=gene-NDY24_06470;Name=NDY24_06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06470 CP098602.1 Protein Homology CDS 1435667 1436275 . - 0 ID=cds-UUE99407.1;Parent=gene-NDY24_06470;Dbxref=NCBI_GP:UUE99407.1;Name=UUE99407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576968.1;locus_tag=NDY24_06470;product=alpha-ketoglutarate-dependent dioxygenase AlkB;protein_id=UUE99407.1;transl_table=11 CP098602.1 Genbank gene 1436402 1438051 . + . ID=gene-NDY24_06475;Name=NDY24_06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06475 CP098602.1 Protein Homology CDS 1436402 1438051 . + 0 ID=cds-UUE99408.1;Parent=gene-NDY24_06475;Dbxref=NCBI_GP:UUE99408.1;Name=UUE99408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348604.1;locus_tag=NDY24_06475;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=UUE99408.1;transl_table=11 CP098602.1 Genbank pseudogene 1438161 1440896 . + . ID=gene-NDY24_06480;Name=NDY24_06480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_06480;pseudo=true CP098602.1 Protein Homology CDS 1438161 1440896 . + 0 ID=cds-NDY24_06480;Parent=gene-NDY24_06480;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117099.1;locus_tag=NDY24_06480;product=polysaccharide biosynthesis protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1440920 1441558 . - . ID=gene-NDY24_06485;Name=NDY24_06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06485 CP098602.1 Protein Homology CDS 1440920 1441558 . - 0 ID=cds-UUE99409.1;Parent=gene-NDY24_06485;Dbxref=NCBI_GP:UUE99409.1;Name=UUE99409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365618.1;locus_tag=NDY24_06485;product=CoA transferase subunit B;protein_id=UUE99409.1;transl_table=11 CP098602.1 Genbank gene 1441558 1442289 . - . ID=gene-NDY24_06490;Name=NDY24_06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06490 CP098602.1 Protein Homology CDS 1441558 1442289 . - 0 ID=cds-UUE99410.1;Parent=gene-NDY24_06490;Dbxref=NCBI_GP:UUE99410.1;Name=UUE99410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484175.1;locus_tag=NDY24_06490;product=CoA transferase subunit A;protein_id=UUE99410.1;transl_table=11 CP098602.1 Genbank pseudogene 1442424 1443770 . + . ID=gene-NDY24_06495;Name=NDY24_06495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_06495;pseudo=true CP098602.1 Protein Homology CDS 1442424 1443770 . + 0 ID=cds-NDY24_06495;Parent=gene-NDY24_06495;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303601.1;locus_tag=NDY24_06495;product=phosphomannomutase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1443816 1445219 . + . ID=gene-NDY24_06500;Name=NDY24_06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06500 CP098602.1 Protein Homology CDS 1443816 1445219 . + 0 ID=cds-UUE99411.1;Parent=gene-NDY24_06500;Dbxref=NCBI_GP:UUE99411.1;Name=UUE99411.1;Ontology_term=GO:0009103,GO:0004476,GO:0008905;gbkey=CDS;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,mannose-phosphate guanylyltransferase activity|0008905||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903949.1;locus_tag=NDY24_06500;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=UUE99411.1;transl_table=11 CP098602.1 Genbank gene 1445341 1446249 . - . ID=gene-NDY24_06505;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=NDY24_06505 CP098602.1 Protein Homology CDS 1445341 1446249 . - 0 ID=cds-UUE99412.1;Parent=gene-NDY24_06505;Dbxref=NCBI_GP:UUE99412.1;Name=UUE99412.1;Ontology_term=GO:0009243,GO:0019305,GO:0008831;gbkey=CDS;gene=rfbD;go_function=dTDP-4-dehydrorhamnose reductase activity|0008831||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446096.1;locus_tag=NDY24_06505;product=dTDP-4-dehydrorhamnose reductase;protein_id=UUE99412.1;transl_table=11 CP098602.1 Genbank gene 1446246 1446803 . - . ID=gene-NDY24_06510;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=NDY24_06510 CP098602.1 Protein Homology CDS 1446246 1446803 . - 0 ID=cds-UUE99413.1;Parent=gene-NDY24_06510;Dbxref=NCBI_GP:UUE99413.1;Name=UUE99413.1;Ontology_term=GO:0009243,GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377788.1;locus_tag=NDY24_06510;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=UUE99413.1;transl_table=11 CP098602.1 Genbank gene 1446800 1447687 . - . ID=gene-NDY24_06515;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=NDY24_06515 CP098602.1 Protein Homology CDS 1446800 1447687 . - 0 ID=cds-UUE99414.1;Parent=gene-NDY24_06515;Dbxref=NCBI_GP:UUE99414.1;Name=UUE99414.1;Ontology_term=GO:0009243,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903936.1;locus_tag=NDY24_06515;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=UUE99414.1;transl_table=11 CP098602.1 Genbank gene 1447741 1448796 . - . ID=gene-NDY24_06520;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=NDY24_06520 CP098602.1 Protein Homology CDS 1447741 1448796 . - 0 ID=cds-UUE99415.1;Parent=gene-NDY24_06520;Dbxref=NCBI_GP:UUE99415.1;Name=UUE99415.1;Ontology_term=GO:0009243,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407612.1;locus_tag=NDY24_06520;product=dTDP-glucose 4%2C6-dehydratase;protein_id=UUE99415.1;transl_table=11 CP098602.1 Genbank gene 1449021 1449767 . + . ID=gene-NDY24_06525;Name=NDY24_06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06525 CP098602.1 Protein Homology CDS 1449021 1449767 . + 0 ID=cds-UUE99416.1;Parent=gene-NDY24_06525;Dbxref=NCBI_GP:UUE99416.1;Name=UUE99416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019182580.1;locus_tag=NDY24_06525;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=UUE99416.1;transl_table=11 CP098602.1 Genbank gene 1449767 1450711 . + . ID=gene-NDY24_06530;Name=NDY24_06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06530 CP098602.1 Protein Homology CDS 1449767 1450711 . + 0 ID=cds-UUE99417.1;Parent=gene-NDY24_06530;Dbxref=NCBI_GP:UUE99417.1;Name=UUE99417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158256.1;locus_tag=NDY24_06530;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=UUE99417.1;transl_table=11 CP098602.1 Genbank gene 1450919 1451617 . + . ID=gene-NDY24_06535;Name=NDY24_06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06535 CP098602.1 Protein Homology CDS 1450919 1451617 . + 0 ID=cds-UUE99418.1;Parent=gene-NDY24_06535;Dbxref=NCBI_GP:UUE99418.1;Name=UUE99418.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920793.1;locus_tag=NDY24_06535;product=NAD-dependent epimerase/dehydratase family protein;protein_id=UUE99418.1;transl_table=11 CP098602.1 Genbank gene 1451607 1452557 . + . ID=gene-NDY24_06540;Name=NDY24_06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06540 CP098602.1 Protein Homology CDS 1451607 1452557 . + 0 ID=cds-UUE99419.1;Parent=gene-NDY24_06540;Dbxref=NCBI_GP:UUE99419.1;Name=UUE99419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814001.1;locus_tag=NDY24_06540;product=glycosyltransferase family 2 protein;protein_id=UUE99419.1;transl_table=11 CP098602.1 Genbank gene 1452554 1452970 . + . ID=gene-NDY24_06545;Name=NDY24_06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06545 CP098602.1 Protein Homology CDS 1452554 1452970 . + 0 ID=cds-UUE99420.1;Parent=gene-NDY24_06545;Dbxref=NCBI_GP:UUE99420.1;Name=UUE99420.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016060.2;locus_tag=NDY24_06545;product=GtrA family protein;protein_id=UUE99420.1;transl_table=11 CP098602.1 Genbank gene 1453648 1455198 . + . ID=gene-NDY24_06550;Name=NDY24_06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06550 CP098602.1 GeneMarkS-2+ CDS 1453648 1455198 . + 0 ID=cds-UUE99421.1;Parent=gene-NDY24_06550;Dbxref=NCBI_GP:UUE99421.1;Name=UUE99421.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_06550;product=hypothetical protein;protein_id=UUE99421.1;transl_table=11 CP098602.1 Genbank gene 1455356 1455802 . + . ID=gene-NDY24_06555;Name=NDY24_06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06555 CP098602.1 GeneMarkS-2+ CDS 1455356 1455802 . + 0 ID=cds-UUE99422.1;Parent=gene-NDY24_06555;Dbxref=NCBI_GP:UUE99422.1;Name=UUE99422.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_06555;product=hypothetical protein;protein_id=UUE99422.1;transl_table=11 CP098602.1 Genbank gene 1456096 1457037 . - . ID=gene-NDY24_06560;Name=NDY24_06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06560 CP098602.1 Protein Homology CDS 1456096 1457037 . - 0 ID=cds-UUE99423.1;Parent=gene-NDY24_06560;Dbxref=NCBI_GP:UUE99423.1;Name=UUE99423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439286.1;locus_tag=NDY24_06560;product=GDP-mannose 4%2C6-dehydratase;protein_id=UUE99423.1;transl_table=11 CP098602.1 Genbank gene 1457021 1458055 . - . ID=gene-NDY24_06565;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=NDY24_06565 CP098602.1 Protein Homology CDS 1457021 1458055 . - 0 ID=cds-UUE99424.1;Parent=gene-NDY24_06565;Dbxref=NCBI_GP:UUE99424.1;Name=UUE99424.1;Ontology_term=GO:0000271,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019042067.1;locus_tag=NDY24_06565;product=GDP-mannose 4%2C6-dehydratase;protein_id=UUE99424.1;transl_table=11 CP098602.1 Genbank gene 1458131 1458775 . - . ID=gene-NDY24_06570;Name=NDY24_06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06570 CP098602.1 Protein Homology CDS 1458131 1458775 . - 0 ID=cds-UUE99425.1;Parent=gene-NDY24_06570;Dbxref=NCBI_GP:UUE99425.1;Name=UUE99425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449656.1;locus_tag=NDY24_06570;product=glycosyltransferase;protein_id=UUE99425.1;transl_table=11 CP098602.1 Genbank gene 1458772 1460523 . - . ID=gene-NDY24_06575;Name=NDY24_06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06575 CP098602.1 Protein Homology CDS 1458772 1460523 . - 0 ID=cds-UUF00306.1;Parent=gene-NDY24_06575;Dbxref=NCBI_GP:UUF00306.1;Name=UUF00306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814022.1;locus_tag=NDY24_06575;product=glycosyltransferase;protein_id=UUF00306.1;transl_table=11 CP098602.1 Genbank gene 1460544 1461605 . - . ID=gene-NDY24_06580;Name=NDY24_06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06580 CP098602.1 Protein Homology CDS 1460544 1461605 . - 0 ID=cds-UUE99426.1;Parent=gene-NDY24_06580;Dbxref=NCBI_GP:UUE99426.1;Name=UUE99426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439290.1;locus_tag=NDY24_06580;product=glycosyltransferase;protein_id=UUE99426.1;transl_table=11 CP098602.1 Genbank gene 1461657 1464050 . - . ID=gene-NDY24_06585;Name=NDY24_06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06585 CP098602.1 Protein Homology CDS 1461657 1464050 . - 0 ID=cds-UUE99427.1;Parent=gene-NDY24_06585;Dbxref=NCBI_GP:UUE99427.1;Name=UUE99427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814026.1;locus_tag=NDY24_06585;product=methyltransferase domain-containing protein;protein_id=UUE99427.1;transl_table=11 CP098602.1 Genbank gene 1464091 1465377 . - . ID=gene-NDY24_06590;Name=NDY24_06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06590 CP098602.1 Protein Homology CDS 1464091 1465377 . - 0 ID=cds-UUE99428.1;Parent=gene-NDY24_06590;Dbxref=NCBI_GP:UUE99428.1;Name=UUE99428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005991814.1;locus_tag=NDY24_06590;product=ABC transporter ATP-binding protein;protein_id=UUE99428.1;transl_table=11 CP098602.1 Genbank gene 1465374 1466159 . - . ID=gene-NDY24_06595;Name=NDY24_06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06595 CP098602.1 Protein Homology CDS 1465374 1466159 . - 0 ID=cds-UUF00307.1;Parent=gene-NDY24_06595;Dbxref=NCBI_GP:UUF00307.1;Name=UUF00307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814028.1;locus_tag=NDY24_06595;product=ABC transporter permease;protein_id=UUF00307.1;transl_table=11 CP098602.1 Genbank gene 1466259 1467641 . - . ID=gene-NDY24_06600;Name=NDY24_06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06600 CP098602.1 Protein Homology CDS 1466259 1467641 . - 0 ID=cds-UUE99429.1;Parent=gene-NDY24_06600;Dbxref=NCBI_GP:UUE99429.1;Name=UUE99429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814029.1;locus_tag=NDY24_06600;product=glycosyltransferase family 4 protein;protein_id=UUE99429.1;transl_table=11 CP098602.1 Genbank gene 1467698 1468837 . - . ID=gene-NDY24_06605;Name=NDY24_06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06605 CP098602.1 Protein Homology CDS 1467698 1468837 . - 0 ID=cds-UUE99430.1;Parent=gene-NDY24_06605;Dbxref=NCBI_GP:UUE99430.1;Name=UUE99430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449649.1;locus_tag=NDY24_06605;product=PLP-dependent aspartate aminotransferase family protein;protein_id=UUE99430.1;transl_table=11 CP098602.1 Genbank gene 1468927 1470297 . - . ID=gene-NDY24_06610;Name=NDY24_06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06610 CP098602.1 Protein Homology CDS 1468927 1470297 . - 0 ID=cds-UUE99431.1;Parent=gene-NDY24_06610;Dbxref=NCBI_GP:UUE99431.1;Name=UUE99431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157251.1;locus_tag=NDY24_06610;product=pyridoxal-phosphate dependent enzyme;protein_id=UUE99431.1;transl_table=11 CP098602.1 Genbank gene 1470516 1470734 . - . ID=gene-NDY24_06615;Name=NDY24_06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06615 CP098602.1 Protein Homology CDS 1470516 1470734 . - 0 ID=cds-UUE99432.1;Parent=gene-NDY24_06615;Dbxref=NCBI_GP:UUE99432.1;Name=UUE99432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237985.1;locus_tag=NDY24_06615;product=YdcH family protein;protein_id=UUE99432.1;transl_table=11 CP098602.1 Genbank gene 1471071 1471961 . - . ID=gene-NDY24_06620;Name=NDY24_06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06620 CP098602.1 Protein Homology CDS 1471071 1471961 . - 0 ID=cds-UUE99433.1;Parent=gene-NDY24_06620;Dbxref=NCBI_GP:UUE99433.1;Name=UUE99433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161845.1;locus_tag=NDY24_06620;product=hypothetical protein;protein_id=UUE99433.1;transl_table=11 CP098602.1 Genbank gene 1471958 1472257 . - . ID=gene-NDY24_06625;Name=NDY24_06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06625 CP098602.1 Protein Homology CDS 1471958 1472257 . - 0 ID=cds-UUF00308.1;Parent=gene-NDY24_06625;Dbxref=NCBI_GP:UUF00308.1;Name=UUF00308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851454.1;locus_tag=NDY24_06625;product=DUF4398 domain-containing protein;protein_id=UUF00308.1;transl_table=11 CP098602.1 Genbank gene 1472440 1473573 . + . ID=gene-NDY24_06630;Name=NDY24_06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06630 CP098602.1 Protein Homology CDS 1472440 1473573 . + 0 ID=cds-UUE99434.1;Parent=gene-NDY24_06630;Dbxref=NCBI_GP:UUE99434.1;Name=UUE99434.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914752.1;locus_tag=NDY24_06630;product=PilT/PilU family type 4a pilus ATPase;protein_id=UUE99434.1;transl_table=11 CP098602.1 Genbank gene 1474094 1474756 . - . ID=gene-NDY24_06635;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=NDY24_06635 CP098602.1 Protein Homology CDS 1474094 1474756 . - 0 ID=cds-UUE99435.1;Parent=gene-NDY24_06635;Dbxref=NCBI_GP:UUE99435.1;Name=UUE99435.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034;gbkey=CDS;gene=maiA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301779.1;locus_tag=NDY24_06635;product=maleylacetoacetate isomerase;protein_id=UUE99435.1;transl_table=11 CP098602.1 Genbank gene 1474812 1475870 . - . ID=gene-NDY24_06640;Name=NDY24_06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06640 CP098602.1 Protein Homology CDS 1474812 1475870 . - 0 ID=cds-UUF00309.1;Parent=gene-NDY24_06640;Dbxref=NCBI_GP:UUF00309.1;Name=UUF00309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160204.1;locus_tag=NDY24_06640;product=fumarylacetoacetate hydrolase family protein;protein_id=UUF00309.1;transl_table=11 CP098602.1 Genbank gene 1476179 1477567 . + . ID=gene-NDY24_06645;Name=NDY24_06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06645 CP098602.1 Protein Homology CDS 1476179 1477567 . + 0 ID=cds-UUE99436.1;Parent=gene-NDY24_06645;Dbxref=NCBI_GP:UUE99436.1;Name=UUE99436.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446112.1;locus_tag=NDY24_06645;product=DEAD/DEAH box helicase;protein_id=UUE99436.1;transl_table=11 CP098602.1 Genbank gene 1477753 1480038 . - . ID=gene-NDY24_06650;Name=NDY24_06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06650 CP098602.1 Protein Homology CDS 1477753 1480038 . - 0 ID=cds-UUE99437.1;Parent=gene-NDY24_06650;Dbxref=NCBI_GP:UUE99437.1;Name=UUE99437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849431.1;locus_tag=NDY24_06650;product=M28 family peptidase;protein_id=UUE99437.1;transl_table=11 CP098602.1 Genbank gene 1480150 1481652 . - . ID=gene-NDY24_06655;Name=NDY24_06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06655 CP098602.1 Protein Homology CDS 1480150 1481652 . - 0 ID=cds-UUE99438.1;Parent=gene-NDY24_06655;Dbxref=NCBI_GP:UUE99438.1;Name=UUE99438.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012801.2;locus_tag=NDY24_06655;product=TonB-dependent receptor;protein_id=UUE99438.1;transl_table=11 CP098602.1 Genbank gene 1481659 1482786 . - . ID=gene-NDY24_06660;Name=NDY24_06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06660 CP098602.1 Protein Homology CDS 1481659 1482786 . - 0 ID=cds-UUE99439.1;Parent=gene-NDY24_06660;Dbxref=NCBI_GP:UUE99439.1;Name=UUE99439.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019335.2;locus_tag=NDY24_06660;product=TonB-dependent receptor plug domain-containing protein;protein_id=UUE99439.1;transl_table=11 CP098602.1 Genbank gene 1483049 1483402 . + . ID=gene-NDY24_06665;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=NDY24_06665 CP098602.1 Protein Homology CDS 1483049 1483402 . + 0 ID=cds-UUE99440.1;Parent=gene-NDY24_06665;Dbxref=NCBI_GP:UUE99440.1;Name=UUE99440.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016900974.1;locus_tag=NDY24_06665;product=6-carboxytetrahydropterin synthase QueD;protein_id=UUE99440.1;transl_table=11 CP098602.1 Genbank pseudogene 1483596 1483957 . + . ID=gene-NDY24_06670;Name=NDY24_06670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_06670;pseudo=true CP098602.1 Protein Homology CDS 1483596 1483957 . + 0 ID=cds-NDY24_06670;Parent=gene-NDY24_06670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158777.1;locus_tag=NDY24_06670;product=phasin family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1484158 1484694 . - . ID=gene-NDY24_06675;Name=NDY24_06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06675 CP098602.1 Protein Homology CDS 1484158 1484694 . - 0 ID=cds-UUE99441.1;Parent=gene-NDY24_06675;Dbxref=NCBI_GP:UUE99441.1;Name=UUE99441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003153636.1;locus_tag=NDY24_06675;product=PIN domain-containing protein;protein_id=UUE99441.1;transl_table=11 CP098602.1 Genbank gene 1484730 1485197 . - . ID=gene-NDY24_06680;Name=NDY24_06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06680 CP098602.1 Protein Homology CDS 1484730 1485197 . - 0 ID=cds-UUE99442.1;Parent=gene-NDY24_06680;Dbxref=NCBI_GP:UUE99442.1;Name=UUE99442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003050245.1;locus_tag=NDY24_06680;product=helix-turn-helix domain-containing protein;protein_id=UUE99442.1;transl_table=11 CP098602.1 Genbank gene 1485336 1486010 . - . ID=gene-NDY24_06685;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=NDY24_06685 CP098602.1 Protein Homology CDS 1485336 1486010 . - 0 ID=cds-UUE99443.1;Parent=gene-NDY24_06685;Dbxref=NCBI_GP:UUE99443.1;Name=UUE99443.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157245.1;locus_tag=NDY24_06685;product=dethiobiotin synthase;protein_id=UUE99443.1;transl_table=11 CP098602.1 Genbank gene 1486129 1486611 . + . ID=gene-NDY24_06690;Name=NDY24_06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06690 CP098602.1 Protein Homology CDS 1486129 1486611 . + 0 ID=cds-UUE99444.1;Parent=gene-NDY24_06690;Dbxref=NCBI_GP:UUE99444.1;Name=UUE99444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506539.1;locus_tag=NDY24_06690;product=GAF domain-containing protein;protein_id=UUE99444.1;transl_table=11 CP098602.1 Genbank gene 1486608 1487000 . + . ID=gene-NDY24_06695;Name=NDY24_06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06695 CP098602.1 Protein Homology CDS 1486608 1487000 . + 0 ID=cds-UUE99445.1;Parent=gene-NDY24_06695;Dbxref=NCBI_GP:UUE99445.1;Name=UUE99445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005926569.1;locus_tag=NDY24_06695;product=TfoX/Sxy family protein;protein_id=UUE99445.1;transl_table=11 CP098602.1 Genbank gene 1487113 1488063 . - . ID=gene-NDY24_06700;Name=NDY24_06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06700 CP098602.1 Protein Homology CDS 1487113 1488063 . - 0 ID=cds-UUE99446.1;Parent=gene-NDY24_06700;Dbxref=NCBI_GP:UUE99446.1;Name=UUE99446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472726.1;locus_tag=NDY24_06700;product=alpha/beta hydrolase-fold protein;protein_id=UUE99446.1;transl_table=11 CP098602.1 Genbank gene 1488121 1490364 . - . ID=gene-NDY24_06705;Name=NDY24_06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06705 CP098602.1 Protein Homology CDS 1488121 1490364 . - 0 ID=cds-UUE99447.1;Parent=gene-NDY24_06705;Dbxref=NCBI_GP:UUE99447.1;Name=UUE99447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005926575.1;locus_tag=NDY24_06705;product=TonB-dependent siderophore receptor;protein_id=UUE99447.1;transl_table=11 CP098602.1 Genbank gene 1490570 1491220 . - . ID=gene-NDY24_06710;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=NDY24_06710 CP098602.1 Protein Homology CDS 1490570 1491220 . - 0 ID=cds-UUE99448.1;Parent=gene-NDY24_06710;Dbxref=NCBI_GP:UUE99448.1;Name=UUE99448.1;Note=PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (PF00702).;Ontology_term=GO:0008152,GO:0009853,GO:0043094,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=metabolic process|0008152||IEA,photorespiration|0009853||IEA,cellular metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348635.1;locus_tag=NDY24_06710;product=phosphoglycolate phosphatase;protein_id=UUE99448.1;transl_table=11 CP098602.1 Genbank gene 1491404 1492483 . - . ID=gene-NDY24_06715;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=NDY24_06715 CP098602.1 Protein Homology CDS 1491404 1492483 . - 0 ID=cds-UUE99449.1;Parent=gene-NDY24_06715;Dbxref=NCBI_GP:UUE99449.1;Name=UUE99449.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157240.1;locus_tag=NDY24_06715;product=DNA polymerase IV;protein_id=UUE99449.1;transl_table=11 CP098602.1 Genbank gene 1492689 1493204 . + . ID=gene-NDY24_06720;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=NDY24_06720 CP098602.1 Protein Homology CDS 1492689 1493204 . + 0 ID=cds-UUE99450.1;Parent=gene-NDY24_06720;Dbxref=NCBI_GP:UUE99450.1;Name=UUE99450.1;Ontology_term=GO:0019171;gbkey=CDS;gene=fabA;go_function=3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035827.1;locus_tag=NDY24_06720;product=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA;protein_id=UUE99450.1;transl_table=11 CP098602.1 Genbank gene 1493204 1494412 . + . ID=gene-NDY24_06725;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=NDY24_06725 CP098602.1 Protein Homology CDS 1493204 1494412 . + 0 ID=cds-UUE99451.1;Parent=gene-NDY24_06725;Dbxref=NCBI_GP:UUE99451.1;Name=UUE99451.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237990.1;locus_tag=NDY24_06725;product=beta-ketoacyl-ACP synthase I;protein_id=UUE99451.1;transl_table=11 CP098602.1 Genbank gene 1494690 1495145 . + . ID=gene-NDY24_06730;Name=NDY24_06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06730 CP098602.1 Protein Homology CDS 1494690 1495145 . + 0 ID=cds-UUE99452.1;Parent=gene-NDY24_06730;Dbxref=NCBI_GP:UUE99452.1;Name=UUE99452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814066.1;locus_tag=NDY24_06730;product=endonuclease;protein_id=UUE99452.1;transl_table=11 CP098602.1 Genbank gene 1495314 1497326 . - . ID=gene-NDY24_06735;Name=NDY24_06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06735 CP098602.1 Protein Homology CDS 1495314 1497326 . - 0 ID=cds-UUF00310.1;Parent=gene-NDY24_06735;Dbxref=NCBI_GP:UUF00310.1;Name=UUF00310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304766.1;locus_tag=NDY24_06735;product=M3 family metallopeptidase;protein_id=UUF00310.1;transl_table=11 CP098602.1 Genbank gene 1497455 1498558 . - . ID=gene-NDY24_06740;Name=NDY24_06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06740 CP098602.1 Protein Homology CDS 1497455 1498558 . - 0 ID=cds-UUE99453.1;Parent=gene-NDY24_06740;Dbxref=NCBI_GP:UUE99453.1;Name=UUE99453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304765.1;locus_tag=NDY24_06740;product=PLP-dependent cysteine synthase family protein;protein_id=UUE99453.1;transl_table=11 CP098602.1 Genbank gene 1498692 1499093 . + . ID=gene-NDY24_06745;Name=NDY24_06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06745 CP098602.1 Protein Homology CDS 1498692 1499093 . + 0 ID=cds-UUE99454.1;Parent=gene-NDY24_06745;Dbxref=NCBI_GP:UUE99454.1;Name=UUE99454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377717.1;locus_tag=NDY24_06745;product=CopL family metal-binding regulatory protein;protein_id=UUE99454.1;transl_table=11 CP098602.1 Genbank gene 1499176 1501011 . + . ID=gene-NDY24_06750;Name=NDY24_06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06750 CP098602.1 Protein Homology CDS 1499176 1501011 . + 0 ID=cds-UUF00311.1;Parent=gene-NDY24_06750;Dbxref=NCBI_GP:UUF00311.1;Name=UUF00311.1;Ontology_term=GO:0006825,GO:0005375,GO:0005507;gbkey=CDS;go_function=copper ion transmembrane transporter activity|0005375||IEA,copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091111.1;locus_tag=NDY24_06750;product=copper resistance system multicopper oxidase;protein_id=UUF00311.1;transl_table=11 CP098602.1 Genbank gene 1501008 1502348 . + . ID=gene-NDY24_06755;Name=NDY24_06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06755 CP098602.1 Protein Homology CDS 1501008 1502348 . + 0 ID=cds-UUE99455.1;Parent=gene-NDY24_06755;Dbxref=NCBI_GP:UUE99455.1;Name=UUE99455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450446.1;locus_tag=NDY24_06755;product=copper resistance protein B;protein_id=UUE99455.1;transl_table=11 CP098602.1 Genbank pseudogene 1502570 1503091 . + . ID=gene-NDY24_06760;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=pseudogene;locus_tag=NDY24_06760;pseudo=true CP098602.1 Protein Homology CDS 1502570 1503091 . + 0 ID=cds-NDY24_06760;Parent=gene-NDY24_06760;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0005975,GO:0051596,GO:0004462;gbkey=CDS;gene=gloA;go_function=lactoylglutathione lyase activity|0004462||IEA;go_process=carbohydrate metabolic process|0005975||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849953.1;locus_tag=NDY24_06760;product=lactoylglutathione lyase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1503267 1504409 . - . ID=gene-NDY24_06765;Name=NDY24_06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06765 CP098602.1 Protein Homology CDS 1503267 1504409 . - 0 ID=cds-UUE99456.1;Parent=gene-NDY24_06765;Dbxref=NCBI_GP:UUE99456.1;Name=UUE99456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017173703.1;locus_tag=NDY24_06765;product=hypothetical protein;protein_id=UUE99456.1;transl_table=11 CP098602.1 Genbank gene 1504639 1505112 . - . ID=gene-NDY24_06770;Name=NDY24_06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06770 CP098602.1 Protein Homology CDS 1504639 1505112 . - 0 ID=cds-UUE99457.1;Parent=gene-NDY24_06770;Dbxref=NCBI_GP:UUE99457.1;Name=UUE99457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506523.1;locus_tag=NDY24_06770;product=hypothetical protein;protein_id=UUE99457.1;transl_table=11 CP098602.1 Genbank gene 1506085 1506282 . - . ID=gene-NDY24_06775;Name=NDY24_06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06775 CP098602.1 GeneMarkS-2+ CDS 1506085 1506282 . - 0 ID=cds-UUE99458.1;Parent=gene-NDY24_06775;Dbxref=NCBI_GP:UUE99458.1;Name=UUE99458.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_06775;product=hypothetical protein;protein_id=UUE99458.1;transl_table=11 CP098602.1 Genbank gene 1506272 1508116 . + . ID=gene-NDY24_06780;Name=NDY24_06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06780 CP098602.1 GeneMarkS-2+ CDS 1506272 1508116 . + 0 ID=cds-UUE99459.1;Parent=gene-NDY24_06780;Dbxref=NCBI_GP:UUE99459.1;Name=UUE99459.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_06780;product=hypothetical protein;protein_id=UUE99459.1;transl_table=11 CP098602.1 Genbank gene 1508307 1510136 . - . ID=gene-NDY24_06785;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=NDY24_06785 CP098602.1 Protein Homology CDS 1508307 1510136 . - 0 ID=cds-UUE99460.1;Parent=gene-NDY24_06785;Dbxref=NCBI_GP:UUE99460.1;Name=UUE99460.1;Ontology_term=GO:0006040,GO:0009252,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159863.1;locus_tag=NDY24_06785;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=UUE99460.1;transl_table=11 CP098602.1 Genbank gene 1510341 1511612 . + . ID=gene-NDY24_06790;Name=NDY24_06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06790 CP098602.1 Protein Homology CDS 1510341 1511612 . + 0 ID=cds-UUE99461.1;Parent=gene-NDY24_06790;Dbxref=NCBI_GP:UUE99461.1;Name=UUE99461.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157227.1;locus_tag=NDY24_06790;product=efflux RND transporter periplasmic adaptor subunit;protein_id=UUE99461.1;transl_table=11 CP098602.1 Genbank gene 1511694 1512413 . + . ID=gene-NDY24_06795;Name=NDY24_06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06795 CP098602.1 Protein Homology CDS 1511694 1512413 . + 0 ID=cds-UUE99462.1;Parent=gene-NDY24_06795;Dbxref=NCBI_GP:UUE99462.1;Name=UUE99462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157226.1;locus_tag=NDY24_06795;product=ABC transporter ATP-binding protein;protein_id=UUE99462.1;transl_table=11 CP098602.1 Genbank pseudogene 1512426 1513723 . + . ID=gene-NDY24_06800;Name=NDY24_06800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_06800;pseudo=true CP098602.1 Protein Homology CDS 1512426 1513723 . + 0 ID=cds-NDY24_06800;Parent=gene-NDY24_06800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012512164.1;locus_tag=NDY24_06800;product=ABC transporter permease;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 1513787 1514996 . + . ID=gene-NDY24_06805;Name=NDY24_06805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_06805;pseudo=true CP098602.1 Protein Homology CDS 1513787 1514996 . + 0 ID=cds-NDY24_06805;Parent=gene-NDY24_06805;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171469.1;locus_tag=NDY24_06805;product=ABC transporter permease;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 1515405 1516746 . + . ID=gene-NDY24_06810;Name=NDY24_06810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_06810;pseudo=true CP098602.1 Protein Homology CDS 1515405 1516746 . + 0 ID=cds-NDY24_06810;Parent=gene-NDY24_06810;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901003.1;locus_tag=NDY24_06810;product=sigma-54 dependent transcriptional regulator;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1516755 1518107 . + . ID=gene-NDY24_06815;Name=NDY24_06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06815 CP098602.1 Protein Homology CDS 1516755 1518107 . + 0 ID=cds-UUE99463.1;Parent=gene-NDY24_06815;Dbxref=NCBI_GP:UUE99463.1;Name=UUE99463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450433.1;locus_tag=NDY24_06815;product=HAMP domain-containing histidine kinase;protein_id=UUE99463.1;transl_table=11 CP098602.1 Genbank gene 1518148 1519113 . - . ID=gene-NDY24_06820;Name=NDY24_06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06820 CP098602.1 Protein Homology CDS 1518148 1519113 . - 0 ID=cds-UUE99464.1;Parent=gene-NDY24_06820;Dbxref=NCBI_GP:UUE99464.1;Name=UUE99464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450432.1;locus_tag=NDY24_06820;product=right-handed parallel beta-helix repeat-containing protein;protein_id=UUE99464.1;transl_table=11 CP098602.1 Genbank gene 1519220 1520584 . - . ID=gene-NDY24_06825;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=NDY24_06825 CP098602.1 Protein Homology CDS 1519220 1520584 . - 0 ID=cds-UUE99465.1;Parent=gene-NDY24_06825;Dbxref=NCBI_GP:UUE99465.1;Name=UUE99465.1;Ontology_term=GO:0009103,GO:0009252,GO:0003977,GO:0019134,GO:0005737;gbkey=CDS;gene=glmU;go_component=cytoplasm|0005737||IEA;go_function=UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407581.1;locus_tag=NDY24_06825;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=UUE99465.1;transl_table=11 CP098602.1 Genbank gene 1520729 1521112 . + . ID=gene-NDY24_06830;Name=NDY24_06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06830 CP098602.1 Protein Homology CDS 1520729 1521112 . + 0 ID=cds-UUE99466.1;Parent=gene-NDY24_06830;Dbxref=NCBI_GP:UUE99466.1;Name=UUE99466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484015.1;locus_tag=NDY24_06830;product=GtrA family protein;protein_id=UUE99466.1;transl_table=11 CP098602.1 Genbank gene 1521301 1521870 . - . ID=gene-NDY24_06835;Name=NDY24_06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06835 CP098602.1 Protein Homology CDS 1521301 1521870 . - 0 ID=cds-UUE99467.1;Parent=gene-NDY24_06835;Dbxref=NCBI_GP:UUE99467.1;Name=UUE99467.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450429.1;locus_tag=NDY24_06835;product=chorismate mutase;protein_id=UUE99467.1;transl_table=11 CP098602.1 Genbank gene 1522104 1522526 . - . ID=gene-NDY24_06840;Name=NDY24_06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06840 CP098602.1 Protein Homology CDS 1522104 1522526 . - 0 ID=cds-UUE99468.1;Parent=gene-NDY24_06840;Dbxref=NCBI_GP:UUE99468.1;Name=UUE99468.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407577.1;locus_tag=NDY24_06840;product=F0F1 ATP synthase subunit epsilon;protein_id=UUE99468.1;transl_table=11 CP098602.1 Genbank gene 1522699 1524105 . - . ID=gene-NDY24_06845;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=NDY24_06845 CP098602.1 Protein Homology CDS 1522699 1524105 . - 0 ID=cds-UUE99469.1;Parent=gene-NDY24_06845;Dbxref=NCBI_GP:UUE99469.1;Name=UUE99469.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504697.1;locus_tag=NDY24_06845;product=F0F1 ATP synthase subunit beta;protein_id=UUE99469.1;transl_table=11 CP098602.1 Genbank gene 1524228 1525091 . - . ID=gene-NDY24_06850;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=NDY24_06850 CP098602.1 Protein Homology CDS 1524228 1525091 . - 0 ID=cds-UUF00312.1;Parent=gene-NDY24_06850;Dbxref=NCBI_GP:UUF00312.1;Name=UUF00312.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371995.1;locus_tag=NDY24_06850;product=F0F1 ATP synthase subunit gamma;protein_id=UUF00312.1;transl_table=11 CP098602.1 Genbank gene 1525205 1526752 . - . ID=gene-NDY24_06855;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=NDY24_06855 CP098602.1 Protein Homology CDS 1525205 1526752 . - 0 ID=cds-UUE99470.1;Parent=gene-NDY24_06855;Dbxref=NCBI_GP:UUE99470.1;Name=UUE99470.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014161761.1;locus_tag=NDY24_06855;product=F0F1 ATP synthase subunit alpha;protein_id=UUE99470.1;transl_table=11 CP098602.1 Genbank pseudogene 1526803 1527327 . - . ID=gene-NDY24_06860;Name=NDY24_06860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_06860;pseudo=true CP098602.1 Protein Homology CDS 1526803 1527327 . - 0 ID=cds-NDY24_06860;Parent=gene-NDY24_06860;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304550.1;locus_tag=NDY24_06860;product=F0F1 ATP synthase subunit delta;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1527331 1527801 . - . ID=gene-NDY24_06865;Name=NDY24_06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06865 CP098602.1 Protein Homology CDS 1527331 1527801 . - 0 ID=cds-UUE99471.1;Parent=gene-NDY24_06865;Dbxref=NCBI_GP:UUE99471.1;Name=UUE99471.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901014.1;locus_tag=NDY24_06865;product=F0F1 ATP synthase subunit B;protein_id=UUE99471.1;transl_table=11 CP098602.1 Genbank gene 1527904 1528218 . - . ID=gene-NDY24_06870;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=NDY24_06870 CP098602.1 Protein Homology CDS 1527904 1528218 . - 0 ID=cds-UUE99472.1;Parent=gene-NDY24_06870;Dbxref=NCBI_GP:UUE99472.1;Name=UUE99472.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003476079.1;locus_tag=NDY24_06870;product=F0F1 ATP synthase subunit C;protein_id=UUE99472.1;transl_table=11 CP098602.1 Genbank gene 1528291 1529091 . - . ID=gene-NDY24_06875;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=NDY24_06875 CP098602.1 Protein Homology CDS 1528291 1529091 . - 0 ID=cds-UUE99473.1;Parent=gene-NDY24_06875;Dbxref=NCBI_GP:UUE99473.1;Name=UUE99473.1;Ontology_term=GO:0015986,GO:0015078,GO:0045263;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814108.1;locus_tag=NDY24_06875;product=F0F1 ATP synthase subunit A;protein_id=UUE99473.1;transl_table=11 CP098602.1 Genbank gene 1529117 1529482 . - . ID=gene-NDY24_06880;Name=NDY24_06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06880 CP098602.1 Protein Homology CDS 1529117 1529482 . - 0 ID=cds-UUE99474.1;Parent=gene-NDY24_06880;Dbxref=NCBI_GP:UUE99474.1;Name=UUE99474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155241.1;locus_tag=NDY24_06880;product=hypothetical protein;protein_id=UUE99474.1;transl_table=11 CP098602.1 Genbank gene 1530008 1530820 . + . ID=gene-NDY24_06885;Name=NDY24_06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06885 CP098602.1 Protein Homology CDS 1530008 1530820 . + 0 ID=cds-UUE99475.1;Parent=gene-NDY24_06885;Dbxref=NCBI_GP:UUE99475.1;Name=UUE99475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171127.1;locus_tag=NDY24_06885;product=hypothetical protein;protein_id=UUE99475.1;transl_table=11 CP098602.1 Genbank gene 1530896 1531594 . - . ID=gene-NDY24_06890;Name=NDY24_06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06890 CP098602.1 GeneMarkS-2+ CDS 1530896 1531594 . - 0 ID=cds-UUE99476.1;Parent=gene-NDY24_06890;Dbxref=NCBI_GP:UUE99476.1;Name=UUE99476.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_06890;product=hypothetical protein;protein_id=UUE99476.1;transl_table=11 CP098602.1 Genbank gene 1531722 1533554 . - . ID=gene-NDY24_06895;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=NDY24_06895 CP098602.1 Protein Homology CDS 1531722 1533554 . - 0 ID=cds-UUE99477.1;Parent=gene-NDY24_06895;Dbxref=NCBI_GP:UUE99477.1;Name=UUE99477.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114723.1;locus_tag=NDY24_06895;product=dihydrolipoyl dehydrogenase;protein_id=UUE99477.1;transl_table=11 CP098602.1 Genbank gene 1533571 1534218 . - . ID=gene-NDY24_06900;Name=NDY24_06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06900 CP098602.1 Protein Homology CDS 1533571 1534218 . - 0 ID=cds-UUE99478.1;Parent=gene-NDY24_06900;Dbxref=NCBI_GP:UUE99478.1;Name=UUE99478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237994.1;locus_tag=NDY24_06900;product=hypothetical protein;protein_id=UUE99478.1;transl_table=11 CP098602.1 Genbank gene 1534215 1535993 . - . ID=gene-NDY24_06905;Name=NDY24_06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06905 CP098602.1 Protein Homology CDS 1534215 1535993 . - 0 ID=cds-UUE99479.1;Parent=gene-NDY24_06905;Dbxref=NCBI_GP:UUE99479.1;Name=UUE99479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974307.1;locus_tag=NDY24_06905;product=dihydrolipoyllysine-residue acetyltransferase;protein_id=UUE99479.1;transl_table=11 CP098602.1 Genbank gene 1536122 1536856 . - . ID=gene-NDY24_06910;Name=NDY24_06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06910 CP098602.1 Protein Homology CDS 1536122 1536856 . - 0 ID=cds-UUF00313.1;Parent=gene-NDY24_06910;Dbxref=NCBI_GP:UUF00313.1;Name=UUF00313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483964.1;locus_tag=NDY24_06910;product=YggN family protein;protein_id=UUF00313.1;transl_table=11 CP098602.1 Genbank gene 1537132 1537692 . - . ID=gene-NDY24_06915;Name=NDY24_06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06915 CP098602.1 Protein Homology CDS 1537132 1537692 . - 0 ID=cds-UUE99480.1;Parent=gene-NDY24_06915;Dbxref=NCBI_GP:UUE99480.1;Name=UUE99480.1;Ontology_term=GO:0006285,GO:0033958;gbkey=CDS;go_function=DNA-deoxyinosine glycosylase activity|0033958||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450415.1;locus_tag=NDY24_06915;product=DNA-deoxyinosine glycosylase;protein_id=UUE99480.1;transl_table=11 CP098602.1 Genbank gene 1537834 1538505 . + . ID=gene-NDY24_06920;Name=NDY24_06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06920 CP098602.1 Protein Homology CDS 1537834 1538505 . + 0 ID=cds-UUE99481.1;Parent=gene-NDY24_06920;Dbxref=NCBI_GP:UUE99481.1;Name=UUE99481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974312.1;locus_tag=NDY24_06920;product=outer membrane beta-barrel protein;protein_id=UUE99481.1;transl_table=11 CP098602.1 Genbank gene 1539253 1539681 . + . ID=gene-NDY24_06925;Name=NDY24_06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06925 CP098602.1 GeneMarkS-2+ CDS 1539253 1539681 . + 0 ID=cds-UUE99482.1;Parent=gene-NDY24_06925;Dbxref=NCBI_GP:UUE99482.1;Name=UUE99482.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_06925;product=hypothetical protein;protein_id=UUE99482.1;transl_table=11 CP098602.1 Genbank gene 1540049 1540606 . - . ID=gene-NDY24_06930;Name=NDY24_06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06930 CP098602.1 Protein Homology CDS 1540049 1540606 . - 0 ID=cds-UUE99483.1;Parent=gene-NDY24_06930;Dbxref=NCBI_GP:UUE99483.1;Name=UUE99483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450413.1;locus_tag=NDY24_06930;product=DUF1453 domain-containing protein;protein_id=UUE99483.1;transl_table=11 CP098602.1 Genbank gene 1540769 1541572 . - . ID=gene-NDY24_06935;Name=NDY24_06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06935 CP098602.1 Protein Homology CDS 1540769 1541572 . - 0 ID=cds-UUE99484.1;Parent=gene-NDY24_06935;Dbxref=NCBI_GP:UUE99484.1;Name=UUE99484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157466.1;locus_tag=NDY24_06935;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=UUE99484.1;transl_table=11 CP098602.1 Genbank gene 1541709 1542404 . - . ID=gene-NDY24_06940;Name=NDY24_06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06940 CP098602.1 Protein Homology CDS 1541709 1542404 . - 0 ID=cds-UUE99485.1;Parent=gene-NDY24_06940;Dbxref=NCBI_GP:UUE99485.1;Name=UUE99485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489185.1;locus_tag=NDY24_06940;product=ABC transporter permease;protein_id=UUE99485.1;transl_table=11 CP098602.1 Genbank gene 1542401 1543408 . - . ID=gene-NDY24_06945;Name=NDY24_06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06945 CP098602.1 Protein Homology CDS 1542401 1543408 . - 0 ID=cds-UUE99486.1;Parent=gene-NDY24_06945;Dbxref=NCBI_GP:UUE99486.1;Name=UUE99486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038713.1;locus_tag=NDY24_06945;product=methionine ABC transporter ATP-binding protein;protein_id=UUE99486.1;transl_table=11 CP098602.1 Genbank gene 1543571 1544467 . - . ID=gene-NDY24_06950;Name=NDY24_06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06950 CP098602.1 Protein Homology CDS 1543571 1544467 . - 0 ID=cds-UUE99487.1;Parent=gene-NDY24_06950;Dbxref=NCBI_GP:UUE99487.1;Name=UUE99487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348672.1;locus_tag=NDY24_06950;product=DMT family transporter;protein_id=UUE99487.1;transl_table=11 CP098602.1 Genbank gene 1544575 1545060 . + . ID=gene-NDY24_06955;Name=NDY24_06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06955 CP098602.1 Protein Homology CDS 1544575 1545060 . + 0 ID=cds-UUE99488.1;Parent=gene-NDY24_06955;Dbxref=NCBI_GP:UUE99488.1;Name=UUE99488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300350.1;locus_tag=NDY24_06955;product=YajQ family cyclic di-GMP-binding protein;protein_id=UUE99488.1;transl_table=11 CP098602.1 Genbank gene 1545197 1546189 . + . ID=gene-NDY24_06960;Name=NDY24_06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06960 CP098602.1 Protein Homology CDS 1545197 1546189 . + 0 ID=cds-UUF00314.1;Parent=gene-NDY24_06960;Dbxref=NCBI_GP:UUF00314.1;Name=UUF00314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257602.1;locus_tag=NDY24_06960;product=alpha/beta fold hydrolase;protein_id=UUF00314.1;transl_table=11 CP098602.1 Genbank gene 1546315 1547121 . + . ID=gene-NDY24_06965;Name=NDY24_06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06965 CP098602.1 Protein Homology CDS 1546315 1547121 . + 0 ID=cds-UUE99489.1;Parent=gene-NDY24_06965;Dbxref=NCBI_GP:UUE99489.1;Name=UUE99489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450405.1;locus_tag=NDY24_06965;product=SDR family oxidoreductase;protein_id=UUE99489.1;transl_table=11 CP098602.1 Genbank gene 1547269 1547982 . - . ID=gene-NDY24_06970;Name=NDY24_06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06970 CP098602.1 Protein Homology CDS 1547269 1547982 . - 0 ID=cds-UUE99490.1;Parent=gene-NDY24_06970;Dbxref=NCBI_GP:UUE99490.1;Name=UUE99490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171645.1;locus_tag=NDY24_06970;product=rRNA pseudouridine synthase;protein_id=UUE99490.1;transl_table=11 CP098602.1 Genbank gene 1547979 1549046 . - . ID=gene-NDY24_06975;Name=NDY24_06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06975 CP098602.1 Protein Homology CDS 1547979 1549046 . - 0 ID=cds-UUE99491.1;Parent=gene-NDY24_06975;Dbxref=NCBI_GP:UUE99491.1;Name=UUE99491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300358.1;locus_tag=NDY24_06975;product=class I SAM-dependent methyltransferase;protein_id=UUE99491.1;transl_table=11 CP098602.1 Genbank gene 1549656 1549874 . + . ID=gene-NDY24_06980;Name=NDY24_06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06980 CP098602.1 Protein Homology CDS 1549656 1549874 . + 0 ID=cds-UUF00315.1;Parent=gene-NDY24_06980;Dbxref=NCBI_GP:UUF00315.1;Name=UUF00315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814144.1;locus_tag=NDY24_06980;product=hypothetical protein;protein_id=UUF00315.1;transl_table=11 CP098602.1 Genbank gene 1549976 1551313 . - . ID=gene-NDY24_06985;Name=NDY24_06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06985 CP098602.1 Protein Homology CDS 1549976 1551313 . - 0 ID=cds-UUE99492.1;Parent=gene-NDY24_06985;Dbxref=NCBI_GP:UUE99492.1;Name=UUE99492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922022.1;locus_tag=NDY24_06985;product=sorbosone dehydrogenase family protein;protein_id=UUE99492.1;transl_table=11 CP098602.1 Genbank gene 1551403 1551711 . - . ID=gene-NDY24_06990;Name=NDY24_06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06990 CP098602.1 Protein Homology CDS 1551403 1551711 . - 0 ID=cds-UUE99493.1;Parent=gene-NDY24_06990;Dbxref=NCBI_GP:UUE99493.1;Name=UUE99493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911254.1;locus_tag=NDY24_06990;product=DUF3247 family protein;protein_id=UUE99493.1;transl_table=11 CP098602.1 Genbank gene 1551837 1553870 . - . ID=gene-NDY24_06995;Name=NDY24_06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_06995 CP098602.1 Protein Homology CDS 1551837 1553870 . - 0 ID=cds-UUE99494.1;Parent=gene-NDY24_06995;Dbxref=NCBI_GP:UUE99494.1;Name=UUE99494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157452.1;locus_tag=NDY24_06995;product=ATP-binding protein;protein_id=UUE99494.1;transl_table=11 CP098602.1 Genbank gene 1553978 1554268 . - . ID=gene-NDY24_07000;Name=NDY24_07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07000 CP098602.1 Protein Homology CDS 1553978 1554268 . - 0 ID=cds-UUE99495.1;Parent=gene-NDY24_07000;Dbxref=NCBI_GP:UUE99495.1;Name=UUE99495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017164608.1;locus_tag=NDY24_07000;product=hypothetical protein;protein_id=UUE99495.1;transl_table=11 CP098602.1 Genbank gene 1554255 1554701 . - . ID=gene-NDY24_07005;Name=NDY24_07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07005 CP098602.1 Protein Homology CDS 1554255 1554701 . - 0 ID=cds-UUE99496.1;Parent=gene-NDY24_07005;Dbxref=NCBI_GP:UUE99496.1;Name=UUE99496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372107.1;locus_tag=NDY24_07005;product=hypothetical protein;protein_id=UUE99496.1;transl_table=11 CP098602.1 Genbank gene 1554950 1555525 . + . ID=gene-NDY24_07010;Name=NDY24_07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07010 CP098602.1 Protein Homology CDS 1554950 1555525 . + 0 ID=cds-UUE99497.1;Parent=gene-NDY24_07010;Dbxref=NCBI_GP:UUE99497.1;Name=UUE99497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005992142.1;locus_tag=NDY24_07010;product=DUF3016 domain-containing protein;protein_id=UUE99497.1;transl_table=11 CP098602.1 Genbank gene 1555673 1556773 . - . ID=gene-NDY24_07015;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=NDY24_07015 CP098602.1 Protein Homology CDS 1555673 1556773 . - 0 ID=cds-UUE99498.1;Parent=gene-NDY24_07015;Dbxref=NCBI_GP:UUE99498.1;Name=UUE99498.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472761.1;locus_tag=NDY24_07015;product=alanine racemase;protein_id=UUE99498.1;transl_table=11 CP098602.1 Genbank gene 1556773 1558062 . - . ID=gene-NDY24_07020;Name=NDY24_07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07020 CP098602.1 Protein Homology CDS 1556773 1558062 . - 0 ID=cds-UUE99499.1;Parent=gene-NDY24_07020;Dbxref=NCBI_GP:UUE99499.1;Name=UUE99499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007963042.1;locus_tag=NDY24_07020;product=D-amino acid dehydrogenase;protein_id=UUE99499.1;transl_table=11 CP098602.1 Genbank gene 1558212 1558691 . + . ID=gene-NDY24_07025;Name=NDY24_07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07025 CP098602.1 Protein Homology CDS 1558212 1558691 . + 0 ID=cds-UUE99500.1;Parent=gene-NDY24_07025;Dbxref=NCBI_GP:UUE99500.1;Name=UUE99500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166392.1;locus_tag=NDY24_07025;product=Lrp/AsnC ligand binding domain-containing protein;protein_id=UUE99500.1;transl_table=11 CP098602.1 Genbank gene 1558805 1559236 . - . ID=gene-NDY24_07030;Name=NDY24_07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07030 CP098602.1 Protein Homology CDS 1558805 1559236 . - 0 ID=cds-UUE99501.1;Parent=gene-NDY24_07030;Dbxref=NCBI_GP:UUE99501.1;Name=UUE99501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157446.1;locus_tag=NDY24_07030;product=hypothetical protein;protein_id=UUE99501.1;transl_table=11 CP098602.1 Genbank gene 1559616 1560080 . + . ID=gene-NDY24_07035;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=NDY24_07035 CP098602.1 Protein Homology CDS 1559616 1560080 . + 0 ID=cds-UUE99502.1;Parent=gene-NDY24_07035;Dbxref=NCBI_GP:UUE99502.1;Name=UUE99502.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489131.1;locus_tag=NDY24_07035;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=UUE99502.1;transl_table=11 CP098602.1 Genbank gene 1560180 1560251 . + . ID=gene-NDY24_07040;Name=NDY24_07040;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_07040 CP098602.1 cmsearch ncRNA 1560180 1560251 . + . ID=rna-NDY24_07040;Parent=gene-NDY24_07040;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_07040;product=sX9 sRNA CP098602.1 cmsearch exon 1560180 1560251 . + . ID=exon-NDY24_07040-1;Parent=rna-NDY24_07040;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_07040;product=sX9 sRNA CP098602.1 Genbank gene 1560304 1560519 . + . ID=gene-NDY24_07045;Name=NDY24_07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07045 CP098602.1 GeneMarkS-2+ CDS 1560304 1560519 . + 0 ID=cds-UUE99503.1;Parent=gene-NDY24_07045;Dbxref=NCBI_GP:UUE99503.1;Name=UUE99503.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_07045;product=hypothetical protein;protein_id=UUE99503.1;transl_table=11 CP098602.1 Genbank gene 1560681 1561535 . + . ID=gene-NDY24_07050;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=NDY24_07050 CP098602.1 Protein Homology CDS 1560681 1561535 . + 0 ID=cds-UUE99504.1;Parent=gene-NDY24_07050;Dbxref=NCBI_GP:UUE99504.1;Name=UUE99504.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303316.1;locus_tag=NDY24_07050;product=flagellar motor stator protein MotA;protein_id=UUE99504.1;transl_table=11 CP098602.1 Genbank gene 1561546 1562760 . + . ID=gene-NDY24_07055;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=NDY24_07055 CP098602.1 Protein Homology CDS 1561546 1562760 . + 0 ID=cds-UUE99505.1;Parent=gene-NDY24_07055;Dbxref=NCBI_GP:UUE99505.1;Name=UUE99505.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452581.1;locus_tag=NDY24_07055;product=flagellar motor protein MotB;protein_id=UUE99505.1;transl_table=11 CP098602.1 Genbank pseudogene 1563170 1563758 . + . ID=gene-NDY24_07060;Name=NDY24_07060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_07060;pseudo=true CP098602.1 Protein Homology CDS 1563170 1563758 . + 0 ID=cds-NDY24_07060;Parent=gene-NDY24_07060;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372152.1;locus_tag=NDY24_07060;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1563767 1564051 . + . ID=gene-NDY24_07065;Name=NDY24_07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07065 CP098602.1 Protein Homology CDS 1563767 1564051 . + 0 ID=cds-UUE99506.1;Parent=gene-NDY24_07065;Dbxref=NCBI_GP:UUE99506.1;Name=UUE99506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019238009.1;locus_tag=NDY24_07065;product=DUF4031 domain-containing protein;protein_id=UUE99506.1;transl_table=11 CP098602.1 Genbank gene 1564462 1565013 . - . ID=gene-NDY24_07070;Name=NDY24_07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07070 CP098602.1 Protein Homology CDS 1564462 1565013 . - 0 ID=cds-UUE99507.1;Parent=gene-NDY24_07070;Dbxref=NCBI_GP:UUE99507.1;Name=UUE99507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452585.1;locus_tag=NDY24_07070;product=hypothetical protein;protein_id=UUE99507.1;transl_table=11 CP098602.1 Genbank gene 1565178 1565444 . + . ID=gene-NDY24_07075;Name=NDY24_07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07075 CP098602.1 Protein Homology CDS 1565178 1565444 . + 0 ID=cds-UUE99508.1;Parent=gene-NDY24_07075;Dbxref=NCBI_GP:UUE99508.1;Name=UUE99508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038741.1;locus_tag=NDY24_07075;product=DUF3297 family protein;protein_id=UUE99508.1;transl_table=11 CP098602.1 Genbank gene 1566058 1566819 . - . ID=gene-NDY24_07080;Name=NDY24_07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07080 CP098602.1 Protein Homology CDS 1566058 1566819 . - 0 ID=cds-UUE99509.1;Parent=gene-NDY24_07080;Dbxref=NCBI_GP:UUE99509.1;Name=UUE99509.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157438.1;locus_tag=NDY24_07080;product=ABC transporter permease;protein_id=UUE99509.1;transl_table=11 CP098602.1 Genbank gene 1566816 1567760 . - . ID=gene-NDY24_07085;Name=NDY24_07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07085 CP098602.1 Protein Homology CDS 1566816 1567760 . - 0 ID=cds-UUE99510.1;Parent=gene-NDY24_07085;Dbxref=NCBI_GP:UUE99510.1;Name=UUE99510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448573.1;locus_tag=NDY24_07085;product=ABC transporter ATP-binding protein;protein_id=UUE99510.1;transl_table=11 CP098602.1 Genbank gene 1568060 1569697 . - . ID=gene-NDY24_07090;Name=NDY24_07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07090 CP098602.1 Protein Homology CDS 1568060 1569697 . - 0 ID=cds-UUE99511.1;Parent=gene-NDY24_07090;Dbxref=NCBI_GP:UUE99511.1;Name=UUE99511.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385;gbkey=CDS;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504747.1;locus_tag=NDY24_07090;product=Na+/H+ antiporter;protein_id=UUE99511.1;transl_table=11 CP098602.1 Genbank gene 1570111 1570683 . - . ID=gene-NDY24_07095;Name=NDY24_07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07095 CP098602.1 GeneMarkS-2+ CDS 1570111 1570683 . - 0 ID=cds-UUE99512.1;Parent=gene-NDY24_07095;Dbxref=NCBI_GP:UUE99512.1;Name=UUE99512.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_07095;product=hypothetical protein;protein_id=UUE99512.1;transl_table=11 CP098602.1 Genbank gene 1571081 1571638 . + . ID=gene-NDY24_07100;Name=NDY24_07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07100 CP098602.1 Protein Homology CDS 1571081 1571638 . + 0 ID=cds-UUE99513.1;Parent=gene-NDY24_07100;Dbxref=NCBI_GP:UUE99513.1;Name=UUE99513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489588.1;locus_tag=NDY24_07100;product=fasciclin domain-containing protein;protein_id=UUE99513.1;transl_table=11 CP098602.1 Genbank pseudogene 1572011 1573449 . - . ID=gene-NDY24_07105;Name=NDY24_07105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_07105;pseudo=true CP098602.1 Protein Homology CDS 1572011 1573449 . - 0 ID=cds-NDY24_07105;Parent=gene-NDY24_07105;Note=This protein belongs to the uracil DNA glycosylase superfamily%2C members of which act in excision repair of DNA. However%2C it belongs more specifically to UdgX branch%2C whose founding member was found to bind uracil in DNA (where it does not belong)%2C without cleaving it%2C appears to promote DNA repair by a pathway involving RecA%2C rather than base excision.%3B frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448568.1;locus_tag=NDY24_07105;product=UdgX family uracil-DNA binding protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1573980 1575224 . - . ID=gene-NDY24_07110;Name=NDY24_07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07110 CP098602.1 Protein Homology CDS 1573980 1575224 . - 0 ID=cds-UUE99514.1;Parent=gene-NDY24_07110;Dbxref=NCBI_GP:UUE99514.1;Name=UUE99514.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167194.1;locus_tag=NDY24_07110;product=putative DNA modification/repair radical SAM protein;protein_id=UUE99514.1;transl_table=11 CP098602.1 Genbank pseudogene 1575542 1576360 . - . ID=gene-NDY24_07115;Name=NDY24_07115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_07115;pseudo=true CP098602.1 Protein Homology CDS 1575542 1576360 . - 0 ID=cds-NDY24_07115;Parent=gene-NDY24_07115;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489595.1;locus_tag=NDY24_07115;product=dioxygenase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1576393 1576803 . - . ID=gene-NDY24_07120;Name=NDY24_07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07120 CP098602.1 Protein Homology CDS 1576393 1576803 . - 0 ID=cds-UUE99515.1;Parent=gene-NDY24_07120;Dbxref=NCBI_GP:UUE99515.1;Name=UUE99515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157431.1;locus_tag=NDY24_07120;product=DoxX family protein;protein_id=UUE99515.1;transl_table=11 CP098602.1 Genbank gene 1576910 1577845 . + . ID=gene-NDY24_07125;Name=NDY24_07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07125 CP098602.1 Protein Homology CDS 1576910 1577845 . + 0 ID=cds-UUE99516.1;Parent=gene-NDY24_07125;Dbxref=NCBI_GP:UUE99516.1;Name=UUE99516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038750.1;locus_tag=NDY24_07125;product=LysR family transcriptional regulator;protein_id=UUE99516.1;transl_table=11 CP098602.1 Genbank gene 1577900 1578469 . + . ID=gene-NDY24_07130;Name=NDY24_07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07130 CP098602.1 Protein Homology CDS 1577900 1578469 . + 0 ID=cds-UUE99517.1;Parent=gene-NDY24_07130;Dbxref=NCBI_GP:UUE99517.1;Name=UUE99517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011270027.1;locus_tag=NDY24_07130;product=flavodoxin family protein;protein_id=UUE99517.1;transl_table=11 CP098602.1 Genbank gene 1578694 1579689 . + . ID=gene-NDY24_07135;Name=NDY24_07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07135 CP098602.1 Protein Homology CDS 1578694 1579689 . + 0 ID=cds-UUE99518.1;Parent=gene-NDY24_07135;Dbxref=NCBI_GP:UUE99518.1;Name=UUE99518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972965.1;locus_tag=NDY24_07135;product=aldo/keto reductase;protein_id=UUE99518.1;transl_table=11 CP098602.1 Genbank gene 1579805 1580500 . + . ID=gene-NDY24_07140;Name=NDY24_07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07140 CP098602.1 Protein Homology CDS 1579805 1580500 . + 0 ID=cds-UUE99519.1;Parent=gene-NDY24_07140;Dbxref=NCBI_GP:UUE99519.1;Name=UUE99519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573318.1;locus_tag=NDY24_07140;product=glycosyltransferase;protein_id=UUE99519.1;transl_table=11 CP098602.1 Genbank gene 1580648 1582717 . + . ID=gene-NDY24_07145;Name=NDY24_07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07145 CP098602.1 Protein Homology CDS 1580648 1582717 . + 0 ID=cds-UUF00316.1;Parent=gene-NDY24_07145;Dbxref=NCBI_GP:UUF00316.1;Name=UUF00316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167581.1;locus_tag=NDY24_07145;product=M13 family metallopeptidase;protein_id=UUF00316.1;transl_table=11 CP098602.1 Genbank gene 1582854 1583783 . - . ID=gene-NDY24_07150;Name=NDY24_07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07150 CP098602.1 Protein Homology CDS 1582854 1583783 . - 0 ID=cds-UUE99520.1;Parent=gene-NDY24_07150;Dbxref=NCBI_GP:UUE99520.1;Name=UUE99520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448559.1;locus_tag=NDY24_07150;product=oxygenase MpaB family protein;protein_id=UUE99520.1;transl_table=11 CP098602.1 Genbank pseudogene 1584192 1584792 . + . ID=gene-NDY24_07155;Name=NDY24_07155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_07155;pseudo=true CP098602.1 Protein Homology CDS 1584192 1584792 . + 0 ID=cds-NDY24_07155;Parent=gene-NDY24_07155;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379748.1;locus_tag=NDY24_07155;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1585316 1586866 . - . ID=gene-NDY24_07160;Name=NDY24_07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07160 CP098602.1 Protein Homology CDS 1585316 1586866 . - 0 ID=cds-UUE99521.1;Parent=gene-NDY24_07160;Dbxref=NCBI_GP:UUE99521.1;Name=UUE99521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489616.1;locus_tag=NDY24_07160;product=APC family permease;protein_id=UUE99521.1;transl_table=11 CP098602.1 Genbank gene 1587019 1587390 . - . ID=gene-NDY24_07165;Name=NDY24_07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07165 CP098602.1 Protein Homology CDS 1587019 1587390 . - 0 ID=cds-UUE99522.1;Parent=gene-NDY24_07165;Dbxref=NCBI_GP:UUE99522.1;Name=UUE99522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157422.1;locus_tag=NDY24_07165;product=hypothetical protein;protein_id=UUE99522.1;transl_table=11 CP098602.1 Genbank gene 1587426 1588202 . - . ID=gene-NDY24_07170;Name=NDY24_07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07170 CP098602.1 Protein Homology CDS 1587426 1588202 . - 0 ID=cds-UUE99523.1;Parent=gene-NDY24_07170;Dbxref=NCBI_GP:UUE99523.1;Name=UUE99523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038759.1;locus_tag=NDY24_07170;product=LytTR family DNA-binding domain-containing protein;protein_id=UUE99523.1;transl_table=11 CP098602.1 Genbank gene 1588199 1589494 . - . ID=gene-NDY24_07175;Name=NDY24_07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07175 CP098602.1 Protein Homology CDS 1588199 1589494 . - 0 ID=cds-UUE99524.1;Parent=gene-NDY24_07175;Dbxref=NCBI_GP:UUE99524.1;Name=UUE99524.1;Ontology_term=GO:0000160,GO:0000155,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439357.1;locus_tag=NDY24_07175;product=histidine kinase;protein_id=UUE99524.1;transl_table=11 CP098602.1 Genbank gene 1589814 1591028 . + . ID=gene-NDY24_07180;Name=NDY24_07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07180 CP098602.1 Protein Homology CDS 1589814 1591028 . + 0 ID=cds-UUE99525.1;Parent=gene-NDY24_07180;Dbxref=NCBI_GP:UUE99525.1;Name=UUE99525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301250.1;locus_tag=NDY24_07180;product=FAD-binding oxidoreductase;protein_id=UUE99525.1;transl_table=11 CP098602.1 Genbank gene 1591051 1591257 . - . ID=gene-NDY24_07185;Name=NDY24_07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07185 CP098602.1 Protein Homology CDS 1591051 1591257 . - 0 ID=cds-UUF00317.1;Parent=gene-NDY24_07185;Dbxref=NCBI_GP:UUF00317.1;Name=UUF00317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016900917.1;locus_tag=NDY24_07185;product=hypothetical protein;protein_id=UUF00317.1;transl_table=11 CP098602.1 Genbank gene 1591293 1591368 . + . ID=gene-NDY24_07190;Name=NDY24_07190;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_07190 CP098602.1 cmsearch ncRNA 1591293 1591368 . + . ID=rna-NDY24_07190;Parent=gene-NDY24_07190;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_07190;product=sX9 sRNA CP098602.1 cmsearch exon 1591293 1591368 . + . ID=exon-NDY24_07190-1;Parent=rna-NDY24_07190;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_07190;product=sX9 sRNA CP098602.1 Genbank gene 1591726 1592232 . + . ID=gene-NDY24_07195;Name=NDY24_07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07195 CP098602.1 Protein Homology CDS 1591726 1592232 . + 0 ID=cds-UUE99526.1;Parent=gene-NDY24_07195;Dbxref=NCBI_GP:UUE99526.1;Name=UUE99526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002803088.1;locus_tag=NDY24_07195;product=ferritin-like domain-containing protein;protein_id=UUE99526.1;transl_table=11 CP098602.1 Genbank gene 1592370 1593269 . + . ID=gene-NDY24_07200;Name=NDY24_07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07200 CP098602.1 Protein Homology CDS 1592370 1593269 . + 0 ID=cds-UUE99527.1;Parent=gene-NDY24_07200;Dbxref=NCBI_GP:UUE99527.1;Name=UUE99527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002803085.1;locus_tag=NDY24_07200;product=manganese catalase family protein;protein_id=UUE99527.1;transl_table=11 CP098602.1 Genbank gene 1593797 1594369 . - . ID=gene-NDY24_07205;Name=NDY24_07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07205 CP098602.1 Protein Homology CDS 1593797 1594369 . - 0 ID=cds-UUE99528.1;Parent=gene-NDY24_07205;Dbxref=NCBI_GP:UUE99528.1;Name=UUE99528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911287.1;locus_tag=NDY24_07205;product=hypothetical protein;protein_id=UUE99528.1;transl_table=11 CP098602.1 Genbank gene 1594646 1598188 . - . ID=gene-NDY24_07210;Name=NDY24_07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07210 CP098602.1 Protein Homology CDS 1594646 1598188 . - 0 ID=cds-UUE99529.1;Parent=gene-NDY24_07210;Dbxref=NCBI_GP:UUE99529.1;Name=UUE99529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988120.1;locus_tag=NDY24_07210;product=PAS domain-containing protein;protein_id=UUE99529.1;transl_table=11 CP098602.1 Genbank gene 1598395 1598778 . + . ID=gene-NDY24_07215;Name=NDY24_07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07215 CP098602.1 Protein Homology CDS 1598395 1598778 . + 0 ID=cds-UUE99530.1;Parent=gene-NDY24_07215;Dbxref=NCBI_GP:UUE99530.1;Name=UUE99530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038770.1;locus_tag=NDY24_07215;product=response regulator;protein_id=UUE99530.1;transl_table=11 CP098602.1 Genbank gene 1598811 1599038 . - . ID=gene-NDY24_07220;Name=NDY24_07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07220 CP098602.1 Protein Homology CDS 1598811 1599038 . - 0 ID=cds-UUE99531.1;Parent=gene-NDY24_07220;Dbxref=NCBI_GP:UUE99531.1;Name=UUE99531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019238017.1;locus_tag=NDY24_07220;product=hypothetical protein;protein_id=UUE99531.1;transl_table=11 CP098602.1 Genbank gene 1599038 1600318 . - . ID=gene-NDY24_07225;Name=NDY24_07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07225 CP098602.1 Protein Homology CDS 1599038 1600318 . - 0 ID=cds-UUE99532.1;Parent=gene-NDY24_07225;Dbxref=NCBI_GP:UUE99532.1;Name=UUE99532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117241.1;locus_tag=NDY24_07225;product=sigma-54 dependent transcriptional regulator;protein_id=UUE99532.1;transl_table=11 CP098602.1 Genbank gene 1600884 1601069 . - . ID=gene-NDY24_07230;Name=NDY24_07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07230 CP098602.1 Protein Homology CDS 1600884 1601069 . - 0 ID=cds-UUE99533.1;Parent=gene-NDY24_07230;Dbxref=NCBI_GP:UUE99533.1;Name=UUE99533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002803068.1;locus_tag=NDY24_07230;product=hypothetical protein;protein_id=UUE99533.1;transl_table=11 CP098602.1 Genbank gene 1601211 1601852 . - . ID=gene-NDY24_07235;Name=NDY24_07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07235 CP098602.1 Protein Homology CDS 1601211 1601852 . - 0 ID=cds-UUE99534.1;Parent=gene-NDY24_07235;Dbxref=NCBI_GP:UUE99534.1;Name=UUE99534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379736.1;locus_tag=NDY24_07235;product=hypothetical protein;protein_id=UUE99534.1;transl_table=11 CP098602.1 Genbank gene 1602073 1602939 . + . ID=gene-NDY24_07240;Name=NDY24_07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07240 CP098602.1 Protein Homology CDS 1602073 1602939 . + 0 ID=cds-UUE99535.1;Parent=gene-NDY24_07240;Dbxref=NCBI_GP:UUE99535.1;Name=UUE99535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463646.1;locus_tag=NDY24_07240;product=SDR family oxidoreductase;protein_id=UUE99535.1;transl_table=11 CP098602.1 Genbank gene 1604011 1605168 . + . ID=gene-NDY24_07245;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=NDY24_07245 CP098602.1 Protein Homology CDS 1604011 1605168 . + 0 ID=cds-UUE99536.1;Parent=gene-NDY24_07245;Dbxref=NCBI_GP:UUE99536.1;Name=UUE99536.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008577700.1;locus_tag=NDY24_07245;product=UDP-glucose 4-epimerase GalE;protein_id=UUE99536.1;transl_table=11 CP098602.1 Genbank gene 1605208 1606392 . + . ID=gene-NDY24_07250;Name=NDY24_07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07250 CP098602.1 Protein Homology CDS 1605208 1606392 . + 0 ID=cds-UUE99537.1;Parent=gene-NDY24_07250;Dbxref=NCBI_GP:UUE99537.1;Name=UUE99537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118546.1;locus_tag=NDY24_07250;product=glycosyltransferase family 1 protein;protein_id=UUE99537.1;transl_table=11 CP098602.1 Genbank gene 1606389 1607576 . + . ID=gene-NDY24_07255;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=NDY24_07255 CP098602.1 Protein Homology CDS 1606389 1607576 . + 0 ID=cds-UUF00318.1;Parent=gene-NDY24_07255;Dbxref=NCBI_GP:UUF00318.1;Name=UUF00318.1;Ontology_term=GO:0009273,GO:0008767;gbkey=CDS;gene=glf;go_function=UDP-galactopyranose mutase activity|0008767||IEA;go_process=peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452919.1;locus_tag=NDY24_07255;product=UDP-galactopyranose mutase;protein_id=UUF00318.1;transl_table=11 CP098602.1 Genbank gene 1607668 1608819 . + . ID=gene-NDY24_07260;Name=NDY24_07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07260 CP098602.1 Protein Homology CDS 1607668 1608819 . + 0 ID=cds-UUE99538.1;Parent=gene-NDY24_07260;Dbxref=NCBI_GP:UUE99538.1;Name=UUE99538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439377.1;locus_tag=NDY24_07260;product=beta-glucosidase;protein_id=UUE99538.1;transl_table=11 CP098602.1 Genbank gene 1608846 1610597 . + . ID=gene-NDY24_07265;Name=NDY24_07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07265 CP098602.1 Protein Homology CDS 1608846 1610597 . + 0 ID=cds-UUF00319.1;Parent=gene-NDY24_07265;Dbxref=NCBI_GP:UUF00319.1;Name=UUF00319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016900932.1;locus_tag=NDY24_07265;product=ABC transporter ATP-binding protein/permease;protein_id=UUF00319.1;transl_table=11 CP098602.1 Genbank gene 1611323 1611967 . - . ID=gene-NDY24_07270;Name=NDY24_07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07270 CP098602.1 Protein Homology CDS 1611323 1611967 . - 0 ID=cds-UUE99539.1;Parent=gene-NDY24_07270;Dbxref=NCBI_GP:UUE99539.1;Name=UUE99539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159347.1;locus_tag=NDY24_07270;product=DUF4142 domain-containing protein;protein_id=UUE99539.1;transl_table=11 CP098602.1 Genbank pseudogene 1612228 1613390 . + . ID=gene-NDY24_07275;Name=NDY24_07275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_07275;pseudo=true CP098602.1 Protein Homology CDS 1612228 1613390 . + 0 ID=cds-NDY24_07275;Parent=gene-NDY24_07275;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849560.1;locus_tag=NDY24_07275;product=glutathione-dependent formaldehyde dehydrogenase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1613469 1613636 . - . ID=gene-NDY24_07280;Name=NDY24_07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07280 CP098602.1 Protein Homology CDS 1613469 1613636 . - 0 ID=cds-UUE99540.1;Parent=gene-NDY24_07280;Dbxref=NCBI_GP:UUE99540.1;Name=UUE99540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157401.1;locus_tag=NDY24_07280;product=hypothetical protein;protein_id=UUE99540.1;transl_table=11 CP098602.1 Genbank gene 1613960 1614211 . + . ID=gene-NDY24_07285;Name=NDY24_07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07285 CP098602.1 Protein Homology CDS 1613960 1614211 . + 0 ID=cds-UUE99541.1;Parent=gene-NDY24_07285;Dbxref=NCBI_GP:UUE99541.1;Name=UUE99541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804067.1;locus_tag=NDY24_07285;product=YkgJ family cysteine cluster protein;protein_id=UUE99541.1;transl_table=11 CP098602.1 Genbank gene 1614221 1614526 . + . ID=gene-NDY24_07290;Name=NDY24_07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07290 CP098602.1 Protein Homology CDS 1614221 1614526 . + 0 ID=cds-UUE99542.1;Parent=gene-NDY24_07290;Dbxref=NCBI_GP:UUE99542.1;Name=UUE99542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016900937.1;locus_tag=NDY24_07290;product=hypothetical protein;protein_id=UUE99542.1;transl_table=11 CP098602.1 Genbank gene 1614667 1614879 . - . ID=gene-NDY24_07295;Name=NDY24_07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07295 CP098602.1 Protein Homology CDS 1614667 1614879 . - 0 ID=cds-UUE99543.1;Parent=gene-NDY24_07295;Dbxref=NCBI_GP:UUE99543.1;Name=UUE99543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008577678.1;locus_tag=NDY24_07295;product=hypothetical protein;protein_id=UUE99543.1;transl_table=11 CP098602.1 Genbank gene 1615158 1616069 . - . ID=gene-NDY24_07300;Name=NDY24_07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07300 CP098602.1 Protein Homology CDS 1615158 1616069 . - 0 ID=cds-UUE99544.1;Parent=gene-NDY24_07300;Dbxref=NCBI_GP:UUE99544.1;Name=UUE99544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449498.1;locus_tag=NDY24_07300;product=LysR family transcriptional regulator;protein_id=UUE99544.1;transl_table=11 CP098602.1 Genbank gene 1616173 1617372 . + . ID=gene-NDY24_07305;Name=NDY24_07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07305 CP098602.1 Protein Homology CDS 1616173 1617372 . + 0 ID=cds-UUE99545.1;Parent=gene-NDY24_07305;Dbxref=NCBI_GP:UUE99545.1;Name=UUE99545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449497.1;locus_tag=NDY24_07305;product=MFS transporter;protein_id=UUE99545.1;transl_table=11 CP098602.1 Genbank gene 1617711 1618448 . + . ID=gene-NDY24_07310;Name=NDY24_07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07310 CP098602.1 Protein Homology CDS 1617711 1618448 . + 0 ID=cds-UUE99546.1;Parent=gene-NDY24_07310;Dbxref=NCBI_GP:UUE99546.1;Name=UUE99546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301270.1;locus_tag=NDY24_07310;product=DUF3348 domain-containing protein;protein_id=UUE99546.1;transl_table=11 CP098602.1 Genbank gene 1618459 1621140 . + . ID=gene-NDY24_07315;Name=NDY24_07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07315 CP098602.1 Protein Homology CDS 1618459 1621140 . + 0 ID=cds-UUE99547.1;Parent=gene-NDY24_07315;Dbxref=NCBI_GP:UUE99547.1;Name=UUE99547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449495.1;locus_tag=NDY24_07315;product=DUF802 domain-containing protein;protein_id=UUE99547.1;transl_table=11 CP098602.1 Genbank gene 1621137 1621811 . + . ID=gene-NDY24_07320;Name=NDY24_07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07320 CP098602.1 Protein Homology CDS 1621137 1621811 . + 0 ID=cds-UUE99548.1;Parent=gene-NDY24_07320;Dbxref=NCBI_GP:UUE99548.1;Name=UUE99548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449494.1;locus_tag=NDY24_07320;product=OmpA family protein;protein_id=UUE99548.1;transl_table=11 CP098602.1 Genbank pseudogene 1621898 1622462 . + . ID=gene-NDY24_07325;Name=NDY24_07325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_07325;pseudo=true CP098602.1 Protein Homology CDS 1621898 1622462 . + 0 ID=cds-NDY24_07325;Parent=gene-NDY24_07325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022885.2;locus_tag=NDY24_07325;product=DUF2894 domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1622491 1624641 . - . ID=gene-NDY24_07330;Name=NDY24_07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07330 CP098602.1 Protein Homology CDS 1622491 1624641 . - 0 ID=cds-UUE99549.1;Parent=gene-NDY24_07330;Dbxref=NCBI_GP:UUE99549.1;Name=UUE99549.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379725.1;locus_tag=NDY24_07330;product=TonB-dependent siderophore receptor;protein_id=UUE99549.1;transl_table=11 CP098602.1 Genbank gene 1624728 1625996 . - . ID=gene-NDY24_07335;Name=NDY24_07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07335 CP098602.1 Protein Homology CDS 1624728 1625996 . - 0 ID=cds-UUE99550.1;Parent=gene-NDY24_07335;Dbxref=NCBI_GP:UUE99550.1;Name=UUE99550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911318.1;locus_tag=NDY24_07335;product=DUF3526 domain-containing protein;protein_id=UUE99550.1;transl_table=11 CP098602.1 Genbank gene 1625996 1627432 . - . ID=gene-NDY24_07340;Name=NDY24_07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07340 CP098602.1 Protein Homology CDS 1625996 1627432 . - 0 ID=cds-UUE99551.1;Parent=gene-NDY24_07340;Dbxref=NCBI_GP:UUE99551.1;Name=UUE99551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016900947.1;locus_tag=NDY24_07340;product=DUF3526 domain-containing protein;protein_id=UUE99551.1;transl_table=11 CP098602.1 Genbank gene 1627443 1628183 . - . ID=gene-NDY24_07345;Name=NDY24_07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07345 CP098602.1 Protein Homology CDS 1627443 1628183 . - 0 ID=cds-UUE99552.1;Parent=gene-NDY24_07345;Dbxref=NCBI_GP:UUE99552.1;Name=UUE99552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449703.1;locus_tag=NDY24_07345;product=ATP-binding cassette domain-containing protein;protein_id=UUE99552.1;transl_table=11 CP098602.1 Genbank gene 1628286 1630145 . + . ID=gene-NDY24_07350;Name=NDY24_07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07350 CP098602.1 Protein Homology CDS 1628286 1630145 . + 0 ID=cds-UUE99553.1;Parent=gene-NDY24_07350;Dbxref=NCBI_GP:UUE99553.1;Name=UUE99553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091180.1;locus_tag=NDY24_07350;product=M14 family metallopeptidase;protein_id=UUE99553.1;transl_table=11 CP098602.1 Genbank gene 1630216 1631160 . - . ID=gene-NDY24_07355;Name=NDY24_07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07355 CP098602.1 Protein Homology CDS 1630216 1631160 . - 0 ID=cds-UUE99554.1;Parent=gene-NDY24_07355;Dbxref=NCBI_GP:UUE99554.1;Name=UUE99554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171643.1;locus_tag=NDY24_07355;product=LysR substrate-binding domain-containing protein;protein_id=UUE99554.1;transl_table=11 CP098602.1 Genbank gene 1631270 1631671 . + . ID=gene-NDY24_07360;Name=NDY24_07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07360 CP098602.1 Protein Homology CDS 1631270 1631671 . + 0 ID=cds-UUE99555.1;Parent=gene-NDY24_07360;Dbxref=NCBI_GP:UUE99555.1;Name=UUE99555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449700.1;locus_tag=NDY24_07360;product=Rid family hydrolase;protein_id=UUE99555.1;transl_table=11 CP098602.1 Genbank gene 1632177 1633361 . + . ID=gene-NDY24_07365;Name=NDY24_07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07365 CP098602.1 Protein Homology CDS 1632177 1633361 . + 0 ID=cds-UUF00320.1;Parent=gene-NDY24_07365;Dbxref=NCBI_GP:UUF00320.1;Name=UUF00320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005931964.1;locus_tag=NDY24_07365;product=hypothetical protein;protein_id=UUF00320.1;transl_table=11 CP098602.1 Genbank gene 1633372 1633800 . + . ID=gene-NDY24_07370;Name=NDY24_07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07370 CP098602.1 Protein Homology CDS 1633372 1633800 . + 0 ID=cds-UUE99556.1;Parent=gene-NDY24_07370;Dbxref=NCBI_GP:UUE99556.1;Name=UUE99556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010343040.1;locus_tag=NDY24_07370;product=substrate-binding domain-containing protein;protein_id=UUE99556.1;transl_table=11 CP098602.1 Genbank pseudogene 1634373 1634528 . + . ID=gene-NDY24_07375;Name=NDY24_07375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_07375;pseudo=true CP098602.1 Protein Homology CDS 1634373 1634528 . + 0 ID=cds-NDY24_07375;Parent=gene-NDY24_07375;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012876.2;locus_tag=NDY24_07375;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1634685 1636025 . + . ID=gene-NDY24_07380;Name=NDY24_07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07380 CP098602.1 Protein Homology CDS 1634685 1636025 . + 0 ID=cds-UUF00321.1;Parent=gene-NDY24_07380;Dbxref=NCBI_GP:UUF00321.1;Name=UUF00321.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003112650.1;locus_tag=NDY24_07380;product=methyl-accepting chemotaxis protein;protein_id=UUF00321.1;transl_table=11 CP098602.1 Genbank gene 1636292 1636588 . + . ID=gene-NDY24_07385;Name=NDY24_07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07385 CP098602.1 GeneMarkS-2+ CDS 1636292 1636588 . + 0 ID=cds-UUE99557.1;Parent=gene-NDY24_07385;Dbxref=NCBI_GP:UUE99557.1;Name=UUE99557.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_07385;product=hypothetical protein;protein_id=UUE99557.1;transl_table=11 CP098602.1 Genbank gene 1636609 1637346 . + . ID=gene-NDY24_07390;Name=NDY24_07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07390 CP098602.1 Protein Homology CDS 1636609 1637346 . + 0 ID=cds-UUE99558.1;Parent=gene-NDY24_07390;Dbxref=NCBI_GP:UUE99558.1;Name=UUE99558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449698.1;locus_tag=NDY24_07390;product=DNA/RNA non-specific endonuclease;protein_id=UUE99558.1;transl_table=11 CP098602.1 Genbank gene 1637466 1637696 . - . ID=gene-NDY24_07395;Name=NDY24_07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07395 CP098602.1 Protein Homology CDS 1637466 1637696 . - 0 ID=cds-UUE99559.1;Parent=gene-NDY24_07395;Dbxref=NCBI_GP:UUE99559.1;Name=UUE99559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365337.1;locus_tag=NDY24_07395;product=DUF1653 domain-containing protein;protein_id=UUE99559.1;transl_table=11 CP098602.1 Genbank gene 1637825 1638034 . - . ID=gene-NDY24_07400;Name=NDY24_07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07400 CP098602.1 Protein Homology CDS 1637825 1638034 . - 0 ID=cds-UUE99560.1;Parent=gene-NDY24_07400;Dbxref=NCBI_GP:UUE99560.1;Name=UUE99560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118556.1;locus_tag=NDY24_07400;product=hypothetical protein;protein_id=UUE99560.1;transl_table=11 CP098602.1 Genbank gene 1638227 1638472 . + . ID=gene-NDY24_07405;Name=NDY24_07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07405 CP098602.1 Protein Homology CDS 1638227 1638472 . + 0 ID=cds-UUE99561.1;Parent=gene-NDY24_07405;Dbxref=NCBI_GP:UUE99561.1;Name=UUE99561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157380.1;locus_tag=NDY24_07405;product=hypothetical protein;protein_id=UUE99561.1;transl_table=11 CP098602.1 Genbank gene 1638425 1639903 . - . ID=gene-NDY24_07410;Name=NDY24_07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07410 CP098602.1 Protein Homology CDS 1638425 1639903 . - 0 ID=cds-UUE99562.1;Parent=gene-NDY24_07410;Dbxref=NCBI_GP:UUE99562.1;Name=UUE99562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449695.1;locus_tag=NDY24_07410;product=SulP family inorganic anion transporter;protein_id=UUE99562.1;transl_table=11 CP098602.1 Genbank gene 1640281 1641057 . - . ID=gene-NDY24_07415;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=NDY24_07415 CP098602.1 Protein Homology CDS 1640281 1641057 . - 0 ID=cds-UUE99563.1;Parent=gene-NDY24_07415;Dbxref=NCBI_GP:UUE99563.1;Name=UUE99563.1;Ontology_term=GO:0006464;gbkey=CDS;gene=map;go_process=cellular protein modification process|0006464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157376.1;locus_tag=NDY24_07415;product=type I methionyl aminopeptidase;protein_id=UUE99563.1;transl_table=11 CP098602.1 Genbank gene 1641054 1641266 . - . ID=gene-NDY24_07420;Name=NDY24_07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07420 CP098602.1 Protein Homology CDS 1641054 1641266 . - 0 ID=cds-UUE99564.1;Parent=gene-NDY24_07420;Dbxref=NCBI_GP:UUE99564.1;Name=UUE99564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091192.1;locus_tag=NDY24_07420;product=ParD-like family protein;protein_id=UUE99564.1;transl_table=11 CP098602.1 Genbank gene 1641539 1642609 . + . ID=gene-NDY24_07425;Name=NDY24_07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07425 CP098602.1 Protein Homology CDS 1641539 1642609 . + 0 ID=cds-UUE99565.1;Parent=gene-NDY24_07425;Dbxref=NCBI_GP:UUE99565.1;Name=UUE99565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449684.1;locus_tag=NDY24_07425;product=acyltransferase;protein_id=UUE99565.1;transl_table=11 CP098602.1 Genbank gene 1642705 1643667 . - . ID=gene-NDY24_07430;Name=NDY24_07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07430 CP098602.1 Protein Homology CDS 1642705 1643667 . - 0 ID=cds-UUE99566.1;Parent=gene-NDY24_07430;Dbxref=NCBI_GP:UUE99566.1;Name=UUE99566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449683.1;locus_tag=NDY24_07430;product=DJ-1/PfpI family protein;protein_id=UUE99566.1;transl_table=11 CP098602.1 Genbank gene 1643734 1644846 . - . ID=gene-NDY24_07435;Name=NDY24_07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07435 CP098602.1 Protein Homology CDS 1643734 1644846 . - 0 ID=cds-UUE99567.1;Parent=gene-NDY24_07435;Dbxref=NCBI_GP:UUE99567.1;Name=UUE99567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449682.1;locus_tag=NDY24_07435;product=DJ-1/PfpI family protein;protein_id=UUE99567.1;transl_table=11 CP098602.1 Genbank gene 1644995 1646206 . - . ID=gene-NDY24_07440;Name=NDY24_07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07440 CP098602.1 Protein Homology CDS 1644995 1646206 . - 0 ID=cds-UUE99568.1;Parent=gene-NDY24_07440;Dbxref=NCBI_GP:UUE99568.1;Name=UUE99568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994784.1;locus_tag=NDY24_07440;product=MFS transporter;protein_id=UUE99568.1;transl_table=11 CP098602.1 Genbank gene 1646427 1647038 . + . ID=gene-NDY24_07445;Name=NDY24_07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07445 CP098602.1 Protein Homology CDS 1646427 1647038 . + 0 ID=cds-UUE99569.1;Parent=gene-NDY24_07445;Dbxref=NCBI_GP:UUE99569.1;Name=UUE99569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449680.1;locus_tag=NDY24_07445;product=TetR/AcrR family transcriptional regulator;protein_id=UUE99569.1;transl_table=11 CP098602.1 Genbank gene 1647235 1648143 . - . ID=gene-NDY24_07450;Name=NDY24_07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07450 CP098602.1 Protein Homology CDS 1647235 1648143 . - 0 ID=cds-UUE99570.1;Parent=gene-NDY24_07450;Dbxref=NCBI_GP:UUE99570.1;Name=UUE99570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006384676.1;locus_tag=NDY24_07450;product=LysR family transcriptional regulator;protein_id=UUE99570.1;transl_table=11 CP098602.1 Genbank gene 1648254 1649357 . + . ID=gene-NDY24_07455;Name=NDY24_07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07455 CP098602.1 Protein Homology CDS 1648254 1649357 . + 0 ID=cds-UUE99571.1;Parent=gene-NDY24_07455;Dbxref=NCBI_GP:UUE99571.1;Name=UUE99571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449678.1;locus_tag=NDY24_07455;product=alkene reductase;protein_id=UUE99571.1;transl_table=11 CP098602.1 Genbank gene 1649614 1650755 . - . ID=gene-NDY24_07460;Name=NDY24_07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07460 CP098602.1 Protein Homology CDS 1650440 1650755 . - 0 ID=cds-UUE99572.1;Parent=gene-NDY24_07460;Dbxref=NCBI_GP:UUE99572.1;Name=UUE99572.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=NDY24_07460;product=IS3 family transposase;protein_id=UUE99572.1;transl_table=11 CP098602.1 Protein Homology CDS 1649614 1650440 . - 2 ID=cds-UUE99572.1;Parent=gene-NDY24_07460;Dbxref=NCBI_GP:UUE99572.1;Name=UUE99572.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=NDY24_07460;product=IS3 family transposase;protein_id=UUE99572.1;transl_table=11 CP098602.1 Genbank gene 1650968 1651621 . - . ID=gene-NDY24_07465;Name=NDY24_07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07465 CP098602.1 Protein Homology CDS 1650968 1651621 . - 0 ID=cds-UUE99573.1;Parent=gene-NDY24_07465;Dbxref=NCBI_GP:UUE99573.1;Name=UUE99573.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450102.1;locus_tag=NDY24_07465;product=M48 family metalloprotease;protein_id=UUE99573.1;transl_table=11 CP098602.1 Genbank gene 1651618 1652076 . - . ID=gene-NDY24_07470;Name=NDY24_07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07470 CP098602.1 Protein Homology CDS 1651618 1652076 . - 0 ID=cds-UUE99574.1;Parent=gene-NDY24_07470;Dbxref=NCBI_GP:UUE99574.1;Name=UUE99574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450103.1;locus_tag=NDY24_07470;product=hypothetical protein;protein_id=UUE99574.1;transl_table=11 CP098602.1 Genbank gene 1652430 1653032 . - . ID=gene-NDY24_07475;Name=NDY24_07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07475 CP098602.1 Protein Homology CDS 1652430 1653032 . - 0 ID=cds-UUE99575.1;Parent=gene-NDY24_07475;Dbxref=NCBI_GP:UUE99575.1;Name=UUE99575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450104.1;locus_tag=NDY24_07475;product=hypothetical protein;protein_id=UUE99575.1;transl_table=11 CP098602.1 Genbank gene 1653288 1654358 . + . ID=gene-NDY24_07480;Name=NDY24_07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07480 CP098602.1 Protein Homology CDS 1653288 1654358 . + 0 ID=cds-UUE99576.1;Parent=gene-NDY24_07480;Dbxref=NCBI_GP:UUE99576.1;Name=UUE99576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347479.1;locus_tag=NDY24_07480;product=avirulence protein;protein_id=UUE99576.1;transl_table=11 CP098602.1 Genbank gene 1654411 1654977 . - . ID=gene-NDY24_07485;Name=NDY24_07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07485 CP098602.1 Protein Homology CDS 1654411 1654977 . - 0 ID=cds-UUE99577.1;Parent=gene-NDY24_07485;Dbxref=NCBI_GP:UUE99577.1;Name=UUE99577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036809.1;locus_tag=NDY24_07485;product=recombinase family protein;protein_id=UUE99577.1;transl_table=11 CP098602.1 Genbank gene 1655159 1655410 . + . ID=gene-NDY24_07490;Name=NDY24_07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07490 CP098602.1 Protein Homology CDS 1655159 1655410 . + 0 ID=cds-UUE99578.1;Parent=gene-NDY24_07490;Dbxref=NCBI_GP:UUE99578.1;Name=UUE99578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019334760.1;locus_tag=NDY24_07490;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=UUE99578.1;transl_table=11 CP098602.1 Genbank gene 1655407 1655802 . + . ID=gene-NDY24_07495;Name=NDY24_07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07495 CP098602.1 Protein Homology CDS 1655407 1655802 . + 0 ID=cds-UUE99579.1;Parent=gene-NDY24_07495;Dbxref=NCBI_GP:UUE99579.1;Name=UUE99579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172645.1;locus_tag=NDY24_07495;product=type II toxin-antitoxin system VapC family toxin;protein_id=UUE99579.1;transl_table=11 CP098602.1 Genbank pseudogene 1656001 1656273 . + . ID=gene-NDY24_07500;Name=NDY24_07500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_07500;pseudo=true CP098602.1 Protein Homology CDS 1656001 1656273 . + 0 ID=cds-NDY24_07500;Parent=gene-NDY24_07500;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612184.1;locus_tag=NDY24_07500;product=transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1656362 1656505 . - . ID=gene-NDY24_07505;Name=NDY24_07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07505 CP098602.1 Protein Homology CDS 1656362 1656505 . - 0 ID=cds-UUE99580.1;Parent=gene-NDY24_07505;Dbxref=NCBI_GP:UUE99580.1;Name=UUE99580.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033894.1;locus_tag=NDY24_07505;product=EexN family lipoprotein;protein_id=UUE99580.1;transl_table=11 CP098602.1 Genbank gene 1656508 1656942 . - . ID=gene-NDY24_07510;Name=NDY24_07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07510 CP098602.1 GeneMarkS-2+ CDS 1656508 1656942 . - 0 ID=cds-UUE99581.1;Parent=gene-NDY24_07510;Dbxref=NCBI_GP:UUE99581.1;Name=UUE99581.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_07510;product=hypothetical protein;protein_id=UUE99581.1;transl_table=11 CP098602.1 Genbank gene 1656952 1657662 . - . ID=gene-NDY24_07515;Name=virB5;gbkey=Gene;gene=virB5;gene_biotype=protein_coding;locus_tag=NDY24_07515 CP098602.1 Protein Homology CDS 1656952 1657662 . - 0 ID=cds-UUE99582.1;Parent=gene-NDY24_07515;Dbxref=NCBI_GP:UUE99582.1;Name=UUE99582.1;Ontology_term=GO:0043684;gbkey=CDS;gene=virB5;go_component=type IV secretion system complex|0043684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449365.1;locus_tag=NDY24_07515;product=P-type DNA transfer protein VirB5;protein_id=UUE99582.1;transl_table=11 CP098602.1 Genbank gene 1657875 1658147 . - . ID=gene-NDY24_07520;Name=NDY24_07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07520 CP098602.1 Protein Homology CDS 1657875 1658147 . - 0 ID=cds-UUE99583.1;Parent=gene-NDY24_07520;Dbxref=NCBI_GP:UUE99583.1;Name=UUE99583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449364.1;locus_tag=NDY24_07520;product=hypothetical protein;protein_id=UUE99583.1;transl_table=11 CP098602.1 Genbank gene 1658154 1658453 . - . ID=gene-NDY24_07525;Name=NDY24_07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07525 CP098602.1 GeneMarkS-2+ CDS 1658154 1658453 . - 0 ID=cds-UUE99584.1;Parent=gene-NDY24_07525;Dbxref=NCBI_GP:UUE99584.1;Name=UUE99584.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_07525;product=hypothetical protein;protein_id=UUE99584.1;transl_table=11 CP098602.1 Genbank gene 1658607 1659370 . - . ID=gene-NDY24_07530;Name=NDY24_07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07530 CP098602.1 Protein Homology CDS 1659055 1659370 . - 0 ID=cds-UUE99585.1;Parent=gene-NDY24_07530;Dbxref=NCBI_GP:UUE99585.1;Name=UUE99585.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=NDY24_07530;product=IS5 family transposase;protein_id=UUE99585.1;transl_table=11 CP098602.1 Protein Homology CDS 1658607 1659055 . - 2 ID=cds-UUE99585.1;Parent=gene-NDY24_07530;Dbxref=NCBI_GP:UUE99585.1;Name=UUE99585.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=NDY24_07530;product=IS5 family transposase;protein_id=UUE99585.1;transl_table=11 CP098602.1 Genbank gene 1660574 1661553 . - . ID=gene-NDY24_07535;Name=NDY24_07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07535 CP098602.1 Protein Homology CDS 1660719 1661553 . - 0 ID=cds-UUE99586.1;Parent=gene-NDY24_07535;Dbxref=NCBI_GP:UUE99586.1;Name=UUE99586.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=NDY24_07535;product=IS5 family transposase;protein_id=UUE99586.1;transl_table=11 CP098602.1 Protein Homology CDS 1660574 1660719 . - 2 ID=cds-UUE99586.1;Parent=gene-NDY24_07535;Dbxref=NCBI_GP:UUE99586.1;Name=UUE99586.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=NDY24_07535;product=IS5 family transposase;protein_id=UUE99586.1;transl_table=11 CP098602.1 Genbank pseudogene 1661683 1662609 . + . ID=gene-NDY24_07540;Name=NDY24_07540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_07540;pseudo=true CP098602.1 Protein Homology CDS 1661683 1662609 . + 0 ID=cds-NDY24_07540;Parent=gene-NDY24_07540;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=NDY24_07540;product=IS5 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1662723 1663799 . - . ID=gene-NDY24_07545;Name=NDY24_07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07545 CP098602.1 Protein Homology CDS 1662723 1663799 . - 0 ID=cds-UUE99587.1;Parent=gene-NDY24_07545;Dbxref=NCBI_GP:UUE99587.1;Name=UUE99587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453179.1;locus_tag=NDY24_07545;product=site-specific integrase;protein_id=UUE99587.1;transl_table=11 CP098602.1 Genbank gene 1663885 1663960 . - . ID=gene-NDY24_07550;Name=NDY24_07550;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_07550 CP098602.1 tRNAscan-SE tRNA 1663885 1663960 . - . ID=rna-NDY24_07550;Parent=gene-NDY24_07550;anticodon=(pos:complement(1663925..1663927));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_07550;product=tRNA-Ile CP098602.1 tRNAscan-SE exon 1663885 1663960 . - . ID=exon-NDY24_07550-1;Parent=rna-NDY24_07550;anticodon=(pos:complement(1663925..1663927));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_07550;product=tRNA-Ile CP098602.1 Genbank gene 1664241 1664564 . - . ID=gene-NDY24_07555;Name=NDY24_07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07555 CP098602.1 Protein Homology CDS 1664241 1664564 . - 0 ID=cds-UUE99588.1;Parent=gene-NDY24_07555;Dbxref=NCBI_GP:UUE99588.1;Name=UUE99588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376816.1;locus_tag=NDY24_07555;product=hypothetical protein;protein_id=UUE99588.1;transl_table=11 CP098602.1 Genbank gene 1664739 1666616 . - . ID=gene-NDY24_07560;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=NDY24_07560 CP098602.1 Protein Homology CDS 1664739 1666616 . - 0 ID=cds-UUE99589.1;Parent=gene-NDY24_07560;Dbxref=NCBI_GP:UUE99589.1;Name=UUE99589.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157069.1;locus_tag=NDY24_07560;product=RNA polymerase sigma factor RpoD;protein_id=UUE99589.1;transl_table=11 CP098602.1 Genbank gene 1666722 1667162 . - . ID=gene-NDY24_07565;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=NDY24_07565 CP098602.1 Protein Homology CDS 1666722 1667162 . - 0 ID=cds-UUE99590.1;Parent=gene-NDY24_07565;Dbxref=NCBI_GP:UUE99590.1;Name=UUE99590.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453176.1;locus_tag=NDY24_07565;product=D-aminoacyl-tRNA deacylase;protein_id=UUE99590.1;transl_table=11 CP098602.1 Genbank gene 1667161 1668177 . + . ID=gene-NDY24_07570;Name=NDY24_07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07570 CP098602.1 Protein Homology CDS 1667161 1668177 . + 0 ID=cds-UUE99591.1;Parent=gene-NDY24_07570;Dbxref=NCBI_GP:UUE99591.1;Name=UUE99591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348771.1;locus_tag=NDY24_07570;product=lauroyl acyltransferase;protein_id=UUE99591.1;transl_table=11 CP098602.1 Genbank gene 1668419 1668940 . - . ID=gene-NDY24_07575;Name=NDY24_07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07575 CP098602.1 Protein Homology CDS 1668419 1668940 . - 0 ID=cds-UUE99592.1;Parent=gene-NDY24_07575;Dbxref=NCBI_GP:UUE99592.1;Name=UUE99592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484403.1;locus_tag=NDY24_07575;product=GNAT family N-acetyltransferase;protein_id=UUE99592.1;transl_table=11 CP098602.1 Genbank gene 1669186 1670319 . + . ID=gene-NDY24_07580;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=NDY24_07580 CP098602.1 Protein Homology CDS 1669186 1670319 . + 0 ID=cds-UUE99593.1;Parent=gene-NDY24_07580;Dbxref=NCBI_GP:UUE99593.1;Name=UUE99593.1;gbkey=CDS;gene=ribA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162247.1;locus_tag=NDY24_07580;product=GTP cyclohydrolase II RibA;protein_id=UUE99593.1;transl_table=11 CP098602.1 Genbank gene 1670459 1670935 . + . ID=gene-NDY24_07585;Name=NDY24_07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07585 CP098602.1 Protein Homology CDS 1670459 1670935 . + 0 ID=cds-UUE99594.1;Parent=gene-NDY24_07585;Dbxref=NCBI_GP:UUE99594.1;Name=UUE99594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091212.1;locus_tag=NDY24_07585;product=PH domain-containing protein;protein_id=UUE99594.1;transl_table=11 CP098602.1 Genbank gene 1670932 1672437 . + . ID=gene-NDY24_07590;Name=NDY24_07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07590 CP098602.1 Protein Homology CDS 1670932 1672437 . + 0 ID=cds-UUE99595.1;Parent=gene-NDY24_07590;Dbxref=NCBI_GP:UUE99595.1;Name=UUE99595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157062.1;locus_tag=NDY24_07590;product=PH domain-containing protein;protein_id=UUE99595.1;transl_table=11 CP098602.1 Genbank gene 1672549 1673607 . - . ID=gene-NDY24_07595;Name=NDY24_07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07595 CP098602.1 Protein Homology CDS 1672549 1673607 . - 0 ID=cds-UUE99596.1;Parent=gene-NDY24_07595;Dbxref=NCBI_GP:UUE99596.1;Name=UUE99596.1;Ontology_term=GO:0047355,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157061.1;locus_tag=NDY24_07595;product=CDP-glycerol glycerophosphotransferase family protein;protein_id=UUE99596.1;transl_table=11 CP098602.1 Genbank gene 1673608 1674432 . + . ID=gene-NDY24_07600;Name=NDY24_07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07600 CP098602.1 Protein Homology CDS 1673608 1674432 . + 0 ID=cds-UUE99597.1;Parent=gene-NDY24_07600;Dbxref=NCBI_GP:UUE99597.1;Name=UUE99597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115138.1;locus_tag=NDY24_07600;product=glycosyltransferase family 2 protein;protein_id=UUE99597.1;transl_table=11 CP098602.1 Genbank gene 1674417 1675688 . - . ID=gene-NDY24_07605;Name=NDY24_07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07605 CP098602.1 Protein Homology CDS 1674417 1675688 . - 0 ID=cds-UUE99598.1;Parent=gene-NDY24_07605;Dbxref=NCBI_GP:UUE99598.1;Name=UUE99598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453167.1;locus_tag=NDY24_07605;product=O-antigen ligase family protein;protein_id=UUE99598.1;transl_table=11 CP098602.1 Genbank gene 1675841 1677562 . - . ID=gene-NDY24_07610;Name=NDY24_07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07610 CP098602.1 Protein Homology CDS 1675841 1677562 . - 0 ID=cds-UUE99599.1;Parent=gene-NDY24_07610;Dbxref=NCBI_GP:UUE99599.1;Name=UUE99599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091215.1;locus_tag=NDY24_07610;product=glycosyltransferase family 39 protein;protein_id=UUE99599.1;transl_table=11 CP098602.1 Genbank gene 1677610 1678920 . - . ID=gene-NDY24_07615;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=NDY24_07615 CP098602.1 Protein Homology CDS 1677610 1678920 . - 0 ID=cds-UUE99600.1;Parent=gene-NDY24_07615;Dbxref=NCBI_GP:UUE99600.1;Name=UUE99600.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of transcription%2C DNA-templated|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849283.1;locus_tag=NDY24_07615;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=UUE99600.1;transl_table=11 CP098602.1 Genbank gene 1678920 1679843 . - . ID=gene-NDY24_07620;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=NDY24_07620 CP098602.1 Protein Homology CDS 1678920 1679843 . - 0 ID=cds-UUE99601.1;Parent=gene-NDY24_07620;Dbxref=NCBI_GP:UUE99601.1;Name=UUE99601.1;Ontology_term=GO:0006431,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453164.1;locus_tag=NDY24_07620;product=methionyl-tRNA formyltransferase;protein_id=UUE99601.1;transl_table=11 CP098602.1 Genbank gene 1679946 1680458 . - . ID=gene-NDY24_07625;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=NDY24_07625 CP098602.1 Protein Homology CDS 1679946 1680458 . - 0 ID=cds-UUE99602.1;Parent=gene-NDY24_07625;Dbxref=NCBI_GP:UUE99602.1;Name=UUE99602.1;Ontology_term=GO:0006464,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=cellular protein modification process|0006464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911379.1;locus_tag=NDY24_07625;product=peptide deformylase;protein_id=UUE99602.1;transl_table=11 CP098602.1 Genbank gene 1680591 1681727 . + . ID=gene-NDY24_07630;Name=NDY24_07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07630 CP098602.1 Protein Homology CDS 1680591 1681727 . + 0 ID=cds-UUE99603.1;Parent=gene-NDY24_07630;Dbxref=NCBI_GP:UUE99603.1;Name=UUE99603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927359.1;locus_tag=NDY24_07630;product=LysM peptidoglycan-binding domain-containing protein;protein_id=UUE99603.1;transl_table=11 CP098602.1 Genbank gene 1681802 1682938 . + . ID=gene-NDY24_07635;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=NDY24_07635 CP098602.1 Protein Homology CDS 1681802 1682938 . + 0 ID=cds-UUE99604.1;Parent=gene-NDY24_07635;Dbxref=NCBI_GP:UUE99604.1;Name=UUE99604.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091219.1;locus_tag=NDY24_07635;product=DNA-processing protein DprA;protein_id=UUE99604.1;transl_table=11 CP098602.1 Genbank gene 1682982 1683455 . + . ID=gene-NDY24_07640;Name=NDY24_07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07640 CP098602.1 Protein Homology CDS 1682982 1683455 . + 0 ID=cds-UUE99605.1;Parent=gene-NDY24_07640;Dbxref=NCBI_GP:UUE99605.1;Name=UUE99605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159357.1;locus_tag=NDY24_07640;product=DUF494 family protein;protein_id=UUE99605.1;transl_table=11 CP098602.1 Genbank gene 1683496 1684221 . + . ID=gene-NDY24_07645;Name=NDY24_07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07645 CP098602.1 Protein Homology CDS 1683496 1684221 . + 0 ID=cds-UUE99606.1;Parent=gene-NDY24_07645;Dbxref=NCBI_GP:UUE99606.1;Name=UUE99606.1;Ontology_term=GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348786.1;locus_tag=NDY24_07645;product=pilin;protein_id=UUE99606.1;transl_table=11 CP098602.1 Genbank gene 1684282 1685514 . + . ID=gene-NDY24_07650;Name=NDY24_07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07650 CP098602.1 Protein Homology CDS 1684282 1685514 . + 0 ID=cds-UUE99607.1;Parent=gene-NDY24_07650;Dbxref=NCBI_GP:UUE99607.1;Name=UUE99607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112322.1;locus_tag=NDY24_07650;product=RDD family protein;protein_id=UUE99607.1;transl_table=11 CP098602.1 Genbank pseudogene 1685697 1688187 . + . ID=gene-NDY24_07655;Name=NDY24_07655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_07655;pseudo=true CP098602.1 Protein Homology CDS 1685697 1688187 . + 0 ID=cds-NDY24_07655;Parent=gene-NDY24_07655;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911395.1;locus_tag=NDY24_07655;product=DNA topoisomerase I;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 1688196 1688774 . + . ID=gene-NDY24_07660;Name=NDY24_07660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_07660;pseudo=true CP098602.1 Protein Homology CDS 1688196 1688774 . + 0 ID=cds-NDY24_07660;Parent=gene-NDY24_07660;Note=frameshifted;Ontology_term=GO:0003725;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453156.1;locus_tag=NDY24_07660;product=Sua5/YciO/YrdC/YwlC family protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 1689027 1689797 . + . ID=gene-NDY24_07665;Name=NDY24_07665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_07665;pseudo=true CP098602.1 Protein Homology CDS 1689027 1689797 . + 0 ID=cds-NDY24_07665;Parent=gene-NDY24_07665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572028.1;locus_tag=NDY24_07665;product=DUF4124 domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 1689794 1690460 . + . ID=gene-NDY24_07670;Name=NDY24_07670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_07670;pseudo=true CP098602.1 Protein Homology CDS 1689794 1690460 . + 0 ID=cds-NDY24_07670;Parent=gene-NDY24_07670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114533.1;locus_tag=NDY24_07670;product=DUF4124 domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1690633 1691409 . - . ID=gene-NDY24_07675;Name=NDY24_07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07675 CP098602.1 Protein Homology CDS 1690633 1691409 . - 0 ID=cds-UUE99608.1;Parent=gene-NDY24_07675;Dbxref=NCBI_GP:UUE99608.1;Name=UUE99608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903673.1;locus_tag=NDY24_07675;product=SDR family oxidoreductase;protein_id=UUE99608.1;transl_table=11 CP098602.1 Genbank gene 1691516 1691731 . + . ID=gene-NDY24_07680;Name=NDY24_07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07680 CP098602.1 Protein Homology CDS 1691516 1691731 . + 0 ID=cds-UUE99609.1;Parent=gene-NDY24_07680;Dbxref=NCBI_GP:UUE99609.1;Name=UUE99609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157045.1;locus_tag=NDY24_07680;product=hypothetical protein;protein_id=UUE99609.1;transl_table=11 CP098602.1 Genbank gene 1691876 1693774 . - . ID=gene-NDY24_07685;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=NDY24_07685 CP098602.1 Protein Homology CDS 1691876 1693774 . - 0 ID=cds-UUE99610.1;Parent=gene-NDY24_07685;Dbxref=NCBI_GP:UUE99610.1;Name=UUE99610.1;Ontology_term=GO:0006465,GO:0006508,GO:0008233,GO:0016021;gbkey=CDS;gene=sppA;go_component=integral component of membrane|0016021||IEA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300058.1;locus_tag=NDY24_07685;product=signal peptide peptidase SppA;protein_id=UUE99610.1;transl_table=11 CP098602.1 Genbank gene 1693859 1695235 . - . ID=gene-NDY24_07690;Name=NDY24_07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07690 CP098602.1 Protein Homology CDS 1693859 1695235 . - 0 ID=cds-UUE99611.1;Parent=gene-NDY24_07690;Dbxref=NCBI_GP:UUE99611.1;Name=UUE99611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091226.1;locus_tag=NDY24_07690;product=MATE family efflux transporter;protein_id=UUE99611.1;transl_table=11 CP098602.1 Genbank gene 1695409 1696041 . - . ID=gene-NDY24_07695;Name=NDY24_07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07695 CP098602.1 Protein Homology CDS 1695409 1696041 . - 0 ID=cds-UUE99612.1;Parent=gene-NDY24_07695;Dbxref=NCBI_GP:UUE99612.1;Name=UUE99612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463666.1;locus_tag=NDY24_07695;product=DUF3106 domain-containing protein;protein_id=UUE99612.1;transl_table=11 CP098602.1 Genbank gene 1696028 1697065 . - . ID=gene-NDY24_07700;Name=NDY24_07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07700 CP098602.1 Protein Homology CDS 1696028 1697065 . - 0 ID=cds-UUE99613.1;Parent=gene-NDY24_07700;Dbxref=NCBI_GP:UUE99613.1;Name=UUE99613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038846.1;locus_tag=NDY24_07700;product=hypothetical protein;protein_id=UUE99613.1;transl_table=11 CP098602.1 Genbank gene 1697536 1699758 . + . ID=gene-NDY24_07705;Name=NDY24_07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07705 CP098602.1 Protein Homology CDS 1697536 1699758 . + 0 ID=cds-UUE99614.1;Parent=gene-NDY24_07705;Dbxref=NCBI_GP:UUE99614.1;Name=UUE99614.1;Ontology_term=GO:0006260,GO:0032508,GO:0003678;gbkey=CDS;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA duplex unwinding|0032508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167545.1;locus_tag=NDY24_07705;product=primosomal protein N';protein_id=UUE99614.1;transl_table=11 CP098602.1 Genbank gene 1699801 1700564 . + . ID=gene-NDY24_07710;Name=NDY24_07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07710 CP098602.1 Protein Homology CDS 1699801 1700116 . + 0 ID=cds-UUE99615.1;Parent=gene-NDY24_07710;Dbxref=NCBI_GP:UUE99615.1;Name=UUE99615.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=NDY24_07710;product=IS5 family transposase;protein_id=UUE99615.1;transl_table=11 CP098602.1 Protein Homology CDS 1700116 1700564 . + 2 ID=cds-UUE99615.1;Parent=gene-NDY24_07710;Dbxref=NCBI_GP:UUE99615.1;Name=UUE99615.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=NDY24_07710;product=IS5 family transposase;protein_id=UUE99615.1;transl_table=11 CP098602.1 Genbank gene 1700963 1701619 . - . ID=gene-NDY24_07715;Name=NDY24_07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07715 CP098602.1 Protein Homology CDS 1700963 1701619 . - 0 ID=cds-UUE99616.1;Parent=gene-NDY24_07715;Dbxref=NCBI_GP:UUE99616.1;Name=UUE99616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453146.1;locus_tag=NDY24_07715;product=glutathione S-transferase;protein_id=UUE99616.1;transl_table=11 CP098602.1 Genbank gene 1701622 1702452 . - . ID=gene-NDY24_07720;Name=NDY24_07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07720 CP098602.1 Protein Homology CDS 1701622 1702452 . - 0 ID=cds-UUE99617.1;Parent=gene-NDY24_07720;Dbxref=NCBI_GP:UUE99617.1;Name=UUE99617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453145.1;locus_tag=NDY24_07720;product=NYN domain-containing protein;protein_id=UUE99617.1;transl_table=11 CP098602.1 Genbank gene 1702449 1702979 . - . ID=gene-NDY24_07725;Name=NDY24_07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07725 CP098602.1 Protein Homology CDS 1702449 1702979 . - 0 ID=cds-UUE99618.1;Parent=gene-NDY24_07725;Dbxref=NCBI_GP:UUE99618.1;Name=UUE99618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506374.1;locus_tag=NDY24_07725;product=hypothetical protein;protein_id=UUE99618.1;transl_table=11 CP098602.1 Genbank gene 1703098 1704390 . + . ID=gene-NDY24_07730;Name=NDY24_07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07730 CP098602.1 Protein Homology CDS 1703098 1704390 . + 0 ID=cds-UUE99619.1;Parent=gene-NDY24_07730;Dbxref=NCBI_GP:UUE99619.1;Name=UUE99619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157036.1;locus_tag=NDY24_07730;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=UUE99619.1;transl_table=11 CP098602.1 Genbank gene 1704443 1705057 . + . ID=gene-NDY24_07735;Name=NDY24_07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07735 CP098602.1 Protein Homology CDS 1704443 1705057 . + 0 ID=cds-UUE99620.1;Parent=gene-NDY24_07735;Dbxref=NCBI_GP:UUE99620.1;Name=UUE99620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971319.1;locus_tag=NDY24_07735;product=trimeric intracellular cation channel family protein;protein_id=UUE99620.1;transl_table=11 CP098602.1 Genbank gene 1705203 1706078 . - . ID=gene-NDY24_07740;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=NDY24_07740 CP098602.1 Protein Homology CDS 1705203 1706078 . - 0 ID=cds-UUE99621.1;Parent=gene-NDY24_07740;Dbxref=NCBI_GP:UUE99621.1;Name=UUE99621.1;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoH;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription%2C initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002803651.1;locus_tag=NDY24_07740;product=RNA polymerase sigma factor RpoH;protein_id=UUE99621.1;transl_table=11 CP098602.1 Genbank gene 1706275 1707000 . - . ID=gene-NDY24_07745;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=NDY24_07745 CP098602.1 Protein Homology CDS 1706275 1707000 . - 0 ID=cds-UUF00322.1;Parent=gene-NDY24_07745;Dbxref=NCBI_GP:UUF00322.1;Name=UUF00322.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506372.1;locus_tag=NDY24_07745;product=uracil-DNA glycosylase;protein_id=UUF00322.1;transl_table=11 CP098602.1 Genbank gene 1707015 1707857 . - . ID=gene-NDY24_07750;Name=NDY24_07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07750 CP098602.1 Protein Homology CDS 1707015 1707857 . - 0 ID=cds-UUE99622.1;Parent=gene-NDY24_07750;Dbxref=NCBI_GP:UUE99622.1;Name=UUE99622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903686.1;locus_tag=NDY24_07750;product=response regulator;protein_id=UUE99622.1;transl_table=11 CP098602.1 Genbank gene 1707830 1708816 . - . ID=gene-NDY24_07755;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=NDY24_07755 CP098602.1 Protein Homology CDS 1707830 1708816 . - 0 ID=cds-UUE99623.1;Parent=gene-NDY24_07755;Dbxref=NCBI_GP:UUE99623.1;Name=UUE99623.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484495.1;locus_tag=NDY24_07755;product=permease-like cell division protein FtsX;protein_id=UUE99623.1;transl_table=11 CP098602.1 Genbank gene 1708813 1709499 . - . ID=gene-NDY24_07760;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=NDY24_07760 CP098602.1 Protein Homology CDS 1708813 1709499 . - 0 ID=cds-UUE99624.1;Parent=gene-NDY24_07760;Dbxref=NCBI_GP:UUE99624.1;Name=UUE99624.1;Ontology_term=GO:0000910,GO:0006810,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA,transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484499.1;locus_tag=NDY24_07760;product=cell division ATP-binding protein FtsE;protein_id=UUE99624.1;transl_table=11 CP098602.1 Genbank gene 1709575 1711311 . - . ID=gene-NDY24_07765;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=NDY24_07765 CP098602.1 Protein Homology CDS 1709575 1711311 . - 0 ID=cds-UUE99625.1;Parent=gene-NDY24_07765;Dbxref=NCBI_GP:UUE99625.1;Name=UUE99625.1;gbkey=CDS;gene=rhlB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157031.1;locus_tag=NDY24_07765;product=ATP-dependent RNA helicase RhlB;protein_id=UUE99625.1;transl_table=11 CP098602.1 Genbank gene 1711510 1711851 . + . ID=gene-NDY24_07770;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=NDY24_07770 CP098602.1 Protein Homology CDS 1711510 1711851 . + 0 ID=cds-UUE99626.1;Parent=gene-NDY24_07770;Dbxref=NCBI_GP:UUE99626.1;Name=UUE99626.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159364.1;locus_tag=NDY24_07770;product=thioredoxin TrxA;protein_id=UUE99626.1;transl_table=11 CP098602.1 Genbank gene 1712072 1713985 . + . ID=gene-NDY24_07775;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=NDY24_07775 CP098602.1 Protein Homology CDS 1712072 1713985 . + 0 ID=cds-UUE99627.1;Parent=gene-NDY24_07775;Dbxref=NCBI_GP:UUE99627.1;Name=UUE99627.1;Ontology_term=GO:0006353,GO:0004386,GO:0008186;gbkey=CDS;gene=rho;go_function=helicase activity|0004386||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription%2C termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171708.1;locus_tag=NDY24_07775;product=transcription termination factor Rho;protein_id=UUE99627.1;transl_table=11 CP098602.1 Genbank gene 1714691 1715575 . - . ID=gene-NDY24_07780;Name=NDY24_07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07780 CP098602.1 Protein Homology CDS 1714691 1715575 . - 0 ID=cds-UUE99628.1;Parent=gene-NDY24_07780;Dbxref=NCBI_GP:UUE99628.1;Name=UUE99628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171707.1;locus_tag=NDY24_07780;product=hypothetical protein;protein_id=UUE99628.1;transl_table=11 CP098602.1 Genbank gene 1715756 1717057 . - . ID=gene-NDY24_07785;Name=NDY24_07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07785 CP098602.1 Protein Homology CDS 1715756 1717057 . - 0 ID=cds-UUE99629.1;Parent=gene-NDY24_07785;Dbxref=NCBI_GP:UUE99629.1;Name=UUE99629.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012264.2;locus_tag=NDY24_07785;product=cytochrome c;protein_id=UUE99629.1;transl_table=11 CP098602.1 Genbank gene 1717068 1717643 . - . ID=gene-NDY24_07790;Name=NDY24_07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07790 CP098602.1 Protein Homology CDS 1717068 1717643 . - 0 ID=cds-UUE99630.1;Parent=gene-NDY24_07790;Dbxref=NCBI_GP:UUE99630.1;Name=UUE99630.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014667.2;locus_tag=NDY24_07790;product=SCO family protein;protein_id=UUE99630.1;transl_table=11 CP098602.1 Genbank gene 1717640 1718269 . - . ID=gene-NDY24_07795;Name=NDY24_07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07795 CP098602.1 Protein Homology CDS 1717640 1718269 . - 0 ID=cds-UUE99631.1;Parent=gene-NDY24_07795;Dbxref=NCBI_GP:UUE99631.1;Name=UUE99631.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014667.2;locus_tag=NDY24_07795;product=SCO family protein;protein_id=UUE99631.1;transl_table=11 CP098602.1 Genbank gene 1718270 1720204 . - . ID=gene-NDY24_07800;Name=NDY24_07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07800 CP098602.1 GeneMarkS-2+ CDS 1718270 1720204 . - 0 ID=cds-UUE99632.1;Parent=gene-NDY24_07800;Dbxref=NCBI_GP:UUE99632.1;Name=UUE99632.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_07800;product=hypothetical protein;protein_id=UUE99632.1;transl_table=11 CP098602.1 Genbank gene 1720204 1726917 . - . ID=gene-NDY24_07805;Name=NDY24_07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07805 CP098602.1 GeneMarkS-2+ CDS 1720204 1726917 . - 0 ID=cds-UUE99633.1;Parent=gene-NDY24_07805;Dbxref=NCBI_GP:UUE99633.1;Name=UUE99633.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_07805;product=hypothetical protein;protein_id=UUE99633.1;transl_table=11 CP098602.1 Genbank gene 1727368 1729107 . - . ID=gene-NDY24_07810;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=NDY24_07810 CP098602.1 Protein Homology CDS 1727368 1729107 . - 0 ID=cds-UUE99634.1;Parent=gene-NDY24_07810;Dbxref=NCBI_GP:UUE99634.1;Name=UUE99634.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160169.1;locus_tag=NDY24_07810;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=UUE99634.1;transl_table=11 CP098602.1 Genbank gene 1729665 1730249 . + . ID=gene-NDY24_07815;Name=NDY24_07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07815 CP098602.1 Protein Homology CDS 1729665 1730249 . + 0 ID=cds-UUE99635.1;Parent=gene-NDY24_07815;Dbxref=NCBI_GP:UUE99635.1;Name=UUE99635.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012422.2;locus_tag=NDY24_07815;product=response regulator transcription factor;protein_id=UUE99635.1;transl_table=11 CP098602.1 Genbank gene 1730246 1731871 . - . ID=gene-NDY24_07820;Name=NDY24_07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07820 CP098602.1 Protein Homology CDS 1730246 1731871 . - 0 ID=cds-UUE99636.1;Parent=gene-NDY24_07820;Dbxref=NCBI_GP:UUE99636.1;Name=UUE99636.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012862.2;locus_tag=NDY24_07820;product=caspase family protein;protein_id=UUE99636.1;transl_table=11 CP098602.1 Genbank gene 1732232 1734445 . - . ID=gene-NDY24_07825;Name=NDY24_07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07825 CP098602.1 Protein Homology CDS 1732232 1734445 . - 0 ID=cds-UUF00323.1;Parent=gene-NDY24_07825;Dbxref=NCBI_GP:UUF00323.1;Name=UUF00323.1;Ontology_term=GO:0006099,GO:0004450;gbkey=CDS;go_function=isocitrate dehydrogenase (NADP+) activity|0004450||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501756.1;locus_tag=NDY24_07825;product=NADP-dependent isocitrate dehydrogenase;protein_id=UUF00323.1;transl_table=11 CP098602.1 Genbank gene 1734895 1735449 . - . ID=gene-NDY24_07830;Name=NDY24_07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07830 CP098602.1 Protein Homology CDS 1734895 1735449 . - 0 ID=cds-UUE99637.1;Parent=gene-NDY24_07830;Dbxref=NCBI_GP:UUE99637.1;Name=UUE99637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157023.1;locus_tag=NDY24_07830;product=hypothetical protein;protein_id=UUE99637.1;transl_table=11 CP098602.1 Genbank gene 1735540 1735833 . - . ID=gene-NDY24_07835;Name=NDY24_07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07835 CP098602.1 Protein Homology CDS 1735540 1735833 . - 0 ID=cds-UUE99638.1;Parent=gene-NDY24_07835;Dbxref=NCBI_GP:UUE99638.1;Name=UUE99638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005923039.1;locus_tag=NDY24_07835;product=LysM peptidoglycan-binding domain-containing protein;protein_id=UUE99638.1;transl_table=11 CP098602.1 Genbank gene 1735937 1736752 . - . ID=gene-NDY24_07840;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=NDY24_07840 CP098602.1 Protein Homology CDS 1735937 1736752 . - 0 ID=cds-UUE99639.1;Parent=gene-NDY24_07840;Dbxref=NCBI_GP:UUE99639.1;Name=UUE99639.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171998.1;locus_tag=NDY24_07840;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=UUE99639.1;transl_table=11 CP098602.1 Genbank gene 1736918 1738234 . - . ID=gene-NDY24_07845;Name=NDY24_07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07845 CP098602.1 Protein Homology CDS 1736918 1738234 . - 0 ID=cds-UUE99640.1;Parent=gene-NDY24_07845;Dbxref=NCBI_GP:UUE99640.1;Name=UUE99640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304562.1;locus_tag=NDY24_07845;product=M20 family metallopeptidase;protein_id=UUE99640.1;transl_table=11 CP098602.1 Genbank gene 1738491 1739732 . + . ID=gene-NDY24_07850;Name=NDY24_07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07850 CP098602.1 Protein Homology CDS 1738491 1739732 . + 0 ID=cds-UUE99641.1;Parent=gene-NDY24_07850;Dbxref=NCBI_GP:UUE99641.1;Name=UUE99641.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849343.1;locus_tag=NDY24_07850;product=efflux RND transporter periplasmic adaptor subunit;protein_id=UUE99641.1;transl_table=11 CP098602.1 Genbank gene 1739826 1743074 . + . ID=gene-NDY24_07855;Name=NDY24_07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07855 CP098602.1 Protein Homology CDS 1739826 1743074 . + 0 ID=cds-UUE99642.1;Parent=gene-NDY24_07855;Dbxref=NCBI_GP:UUE99642.1;Name=UUE99642.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019238036.1;locus_tag=NDY24_07855;product=efflux RND transporter permease subunit;protein_id=UUE99642.1;transl_table=11 CP098602.1 Genbank gene 1743205 1746345 . + . ID=gene-NDY24_07860;Name=NDY24_07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07860 CP098602.1 Protein Homology CDS 1743205 1746345 . + 0 ID=cds-UUE99643.1;Parent=gene-NDY24_07860;Dbxref=NCBI_GP:UUE99643.1;Name=UUE99643.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171705.1;locus_tag=NDY24_07860;product=efflux RND transporter permease subunit;protein_id=UUE99643.1;transl_table=11 CP098602.1 Genbank gene 1747629 1748996 . - . ID=gene-NDY24_07865;Name=NDY24_07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07865 CP098602.1 Protein Homology CDS 1747629 1748996 . - 0 ID=cds-UUE99644.1;Parent=gene-NDY24_07865;Dbxref=NCBI_GP:UUE99644.1;Name=UUE99644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007973536.1;locus_tag=NDY24_07865;product=VOC family protein;protein_id=UUE99644.1;transl_table=11 CP098602.1 Genbank gene 1749329 1749949 . - . ID=gene-NDY24_07870;Name=NDY24_07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07870 CP098602.1 Protein Homology CDS 1749329 1749949 . - 0 ID=cds-UUF00324.1;Parent=gene-NDY24_07870;Dbxref=NCBI_GP:UUF00324.1;Name=UUF00324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112508.1;locus_tag=NDY24_07870;product=hypothetical protein;protein_id=UUF00324.1;transl_table=11 CP098602.1 Genbank gene 1750120 1750707 . - . ID=gene-NDY24_07875;Name=NDY24_07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07875 CP098602.1 Protein Homology CDS 1750120 1750707 . - 0 ID=cds-UUE99645.1;Parent=gene-NDY24_07875;Dbxref=NCBI_GP:UUE99645.1;Name=UUE99645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157015.1;locus_tag=NDY24_07875;product=hypothetical protein;protein_id=UUE99645.1;transl_table=11 CP098602.1 Genbank gene 1750816 1751574 . - . ID=gene-NDY24_07880;Name=NDY24_07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07880 CP098602.1 Protein Homology CDS 1750816 1751574 . - 0 ID=cds-UUE99646.1;Parent=gene-NDY24_07880;Dbxref=NCBI_GP:UUE99646.1;Name=UUE99646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903158.1;locus_tag=NDY24_07880;product=HAD family hydrolase;protein_id=UUE99646.1;transl_table=11 CP098602.1 Genbank gene 1751612 1752016 . - . ID=gene-NDY24_07885;Name=NDY24_07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07885 CP098602.1 Protein Homology CDS 1751612 1752016 . - 0 ID=cds-UUF00325.1;Parent=gene-NDY24_07885;Dbxref=NCBI_GP:UUF00325.1;Name=UUF00325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157013.1;locus_tag=NDY24_07885;product=EF-hand domain-containing protein;protein_id=UUF00325.1;transl_table=11 CP098602.1 Genbank gene 1752289 1752648 . - . ID=gene-NDY24_07890;Name=NDY24_07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07890 CP098602.1 Protein Homology CDS 1752289 1752648 . - 0 ID=cds-UUE99647.1;Parent=gene-NDY24_07890;Dbxref=NCBI_GP:UUE99647.1;Name=UUE99647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157012.1;locus_tag=NDY24_07890;product=EF-hand domain-containing protein;protein_id=UUE99647.1;transl_table=11 CP098602.1 Genbank gene 1752874 1753251 . - . ID=gene-NDY24_07895;Name=NDY24_07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07895 CP098602.1 Protein Homology CDS 1752874 1753251 . - 0 ID=cds-UUE99648.1;Parent=gene-NDY24_07895;Dbxref=NCBI_GP:UUE99648.1;Name=UUE99648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911463.1;locus_tag=NDY24_07895;product=hypothetical protein;protein_id=UUE99648.1;transl_table=11 CP098602.1 Genbank gene 1753389 1753586 . - . ID=gene-NDY24_07900;Name=NDY24_07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07900 CP098602.1 Protein Homology CDS 1753389 1753586 . - 0 ID=cds-UUE99649.1;Parent=gene-NDY24_07900;Dbxref=NCBI_GP:UUE99649.1;Name=UUE99649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903162.1;locus_tag=NDY24_07900;product=CPXCG motif-containing cysteine-rich protein;protein_id=UUE99649.1;transl_table=11 CP098602.1 Genbank gene 1753737 1754441 . - . ID=gene-NDY24_07905;Name=NDY24_07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07905 CP098602.1 Protein Homology CDS 1753737 1754441 . - 0 ID=cds-UUE99650.1;Parent=gene-NDY24_07905;Dbxref=NCBI_GP:UUE99650.1;Name=UUE99650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038882.1;locus_tag=NDY24_07905;product=M15 family metallopeptidase;protein_id=UUE99650.1;transl_table=11 CP098602.1 Genbank pseudogene 1754736 1756732 . - . ID=gene-NDY24_07910;Name=NDY24_07910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_07910;pseudo=true CP098602.1 Protein Homology CDS 1754736 1756732 . - 0 ID=cds-NDY24_07910;Parent=gene-NDY24_07910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003480679.1;locus_tag=NDY24_07910;product=peptidoglycan-binding protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1756886 1757353 . - . ID=gene-NDY24_07915;Name=NDY24_07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07915 CP098602.1 GeneMarkS-2+ CDS 1756886 1757353 . - 0 ID=cds-UUE99651.1;Parent=gene-NDY24_07915;Dbxref=NCBI_GP:UUE99651.1;Name=UUE99651.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_07915;product=hypothetical protein;protein_id=UUE99651.1;transl_table=11 CP098602.1 Genbank gene 1757380 1757661 . - . ID=gene-NDY24_07920;Name=NDY24_07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07920 CP098602.1 GeneMarkS-2+ CDS 1757380 1757661 . - 0 ID=cds-UUE99652.1;Parent=gene-NDY24_07920;Dbxref=NCBI_GP:UUE99652.1;Name=UUE99652.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_07920;product=hypothetical protein;protein_id=UUE99652.1;transl_table=11 CP098602.1 Genbank pseudogene 1758037 1758955 . - . ID=gene-NDY24_07925;Name=NDY24_07925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_07925;pseudo=true CP098602.1 Protein Homology CDS 1758037 1758955 . - 0 ID=cds-NDY24_07925;Parent=gene-NDY24_07925;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439427.1;locus_tag=NDY24_07925;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1759129 1759932 . - . ID=gene-NDY24_07930;Name=NDY24_07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07930 CP098602.1 Protein Homology CDS 1759129 1759932 . - 0 ID=cds-UUE99653.1;Parent=gene-NDY24_07930;Dbxref=NCBI_GP:UUE99653.1;Name=UUE99653.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449381.1;locus_tag=NDY24_07930;product=N-acetylmuramoyl-L-alanine amidase;protein_id=UUE99653.1;transl_table=11 CP098602.1 Genbank gene 1760198 1761610 . + . ID=gene-NDY24_07935;Name=NDY24_07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07935 CP098602.1 Protein Homology CDS 1760198 1761610 . + 0 ID=cds-UUE99654.1;Parent=gene-NDY24_07935;Dbxref=NCBI_GP:UUE99654.1;Name=UUE99654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091256.1;locus_tag=NDY24_07935;product=SH3 domain-containing protein;protein_id=UUE99654.1;transl_table=11 CP098602.1 Genbank gene 1761607 1762704 . + . ID=gene-NDY24_07940;Name=NDY24_07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07940 CP098602.1 Protein Homology CDS 1761607 1762704 . + 0 ID=cds-UUE99655.1;Parent=gene-NDY24_07940;Dbxref=NCBI_GP:UUE99655.1;Name=UUE99655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005987897.1;locus_tag=NDY24_07940;product=dipeptide epimerase;protein_id=UUE99655.1;transl_table=11 CP098602.1 Genbank gene 1763266 1764042 . + . ID=gene-NDY24_07945;Name=NDY24_07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07945 CP098602.1 Protein Homology CDS 1763266 1764042 . + 0 ID=cds-UUE99656.1;Parent=gene-NDY24_07945;Dbxref=NCBI_GP:UUE99656.1;Name=UUE99656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450816.1;locus_tag=NDY24_07945;product=hypothetical protein;protein_id=UUE99656.1;transl_table=11 CP098602.1 Genbank gene 1764039 1765346 . + . ID=gene-NDY24_07950;Name=NDY24_07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07950 CP098602.1 Protein Homology CDS 1764039 1765346 . + 0 ID=cds-UUE99657.1;Parent=gene-NDY24_07950;Dbxref=NCBI_GP:UUE99657.1;Name=UUE99657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159375.1;locus_tag=NDY24_07950;product=APC family permease;protein_id=UUE99657.1;transl_table=11 CP098602.1 Genbank gene 1765434 1765931 . + . ID=gene-NDY24_07955;Name=NDY24_07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07955 CP098602.1 Protein Homology CDS 1765434 1765931 . + 0 ID=cds-UUE99658.1;Parent=gene-NDY24_07955;Dbxref=NCBI_GP:UUE99658.1;Name=UUE99658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159376.1;locus_tag=NDY24_07955;product=hypothetical protein;protein_id=UUE99658.1;transl_table=11 CP098602.1 Genbank gene 1766113 1766445 . + . ID=gene-NDY24_07960;Name=NDY24_07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07960 CP098602.1 Protein Homology CDS 1766113 1766445 . + 0 ID=cds-UUE99659.1;Parent=gene-NDY24_07960;Dbxref=NCBI_GP:UUE99659.1;Name=UUE99659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452391.1;locus_tag=NDY24_07960;product=hypothetical protein;protein_id=UUE99659.1;transl_table=11 CP098602.1 Genbank gene 1766499 1766936 . - . ID=gene-NDY24_07965;Name=NDY24_07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07965 CP098602.1 Protein Homology CDS 1766499 1766936 . - 0 ID=cds-UUE99660.1;Parent=gene-NDY24_07965;Dbxref=NCBI_GP:UUE99660.1;Name=UUE99660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452390.1;locus_tag=NDY24_07965;product=hypothetical protein;protein_id=UUE99660.1;transl_table=11 CP098602.1 Genbank gene 1767108 1768286 . + . ID=gene-NDY24_07970;Name=NDY24_07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07970 CP098602.1 Protein Homology CDS 1767108 1768286 . + 0 ID=cds-UUE99661.1;Parent=gene-NDY24_07970;Dbxref=NCBI_GP:UUE99661.1;Name=UUE99661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484599.1;locus_tag=NDY24_07970;product=PQQ-dependent sugar dehydrogenase;protein_id=UUE99661.1;transl_table=11 CP098602.1 Genbank gene 1768552 1769315 . + . ID=gene-NDY24_07975;Name=NDY24_07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07975 CP098602.1 Protein Homology CDS 1768552 1768867 . + 0 ID=cds-UUE99662.1;Parent=gene-NDY24_07975;Dbxref=NCBI_GP:UUE99662.1;Name=UUE99662.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=NDY24_07975;product=IS5 family transposase;protein_id=UUE99662.1;transl_table=11 CP098602.1 Protein Homology CDS 1768867 1769315 . + 2 ID=cds-UUE99662.1;Parent=gene-NDY24_07975;Dbxref=NCBI_GP:UUE99662.1;Name=UUE99662.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=NDY24_07975;product=IS5 family transposase;protein_id=UUE99662.1;transl_table=11 CP098602.1 Genbank gene 1769386 1771557 . - . ID=gene-NDY24_07980;Name=NDY24_07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_07980 CP098602.1 Protein Homology CDS 1769386 1771557 . - 0 ID=cds-UUE99663.1;Parent=gene-NDY24_07980;Dbxref=NCBI_GP:UUE99663.1;Name=UUE99663.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452388.1;locus_tag=NDY24_07980;product=glycoside hydrolase family 3 C-terminal domain-containing protein;protein_id=UUE99663.1;transl_table=11 CP098602.1 Genbank gene 1771815 1772192 . - . ID=gene-NDY24_07985;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=NDY24_07985 CP098602.1 Protein Homology CDS 1771815 1772192 . - 0 ID=cds-UUE99664.1;Parent=gene-NDY24_07985;Dbxref=NCBI_GP:UUE99664.1;Name=UUE99664.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452387.1;locus_tag=NDY24_07985;product=dihydroneopterin aldolase;protein_id=UUE99664.1;transl_table=11 CP098602.1 Genbank gene 1772279 1773343 . - . ID=gene-NDY24_07990;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=NDY24_07990 CP098602.1 Protein Homology CDS 1772279 1773343 . - 0 ID=cds-UUE99665.1;Parent=gene-NDY24_07990;Dbxref=NCBI_GP:UUE99665.1;Name=UUE99665.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038897.1;locus_tag=NDY24_07990;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=UUE99665.1;transl_table=11 CP098602.1 Genbank gene 1773638 1773853 . + . ID=gene-NDY24_07995;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=NDY24_07995 CP098602.1 Protein Homology CDS 1773638 1773853 . + 0 ID=cds-UUE99666.1;Parent=gene-NDY24_07995;Dbxref=NCBI_GP:UUE99666.1;Name=UUE99666.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011235429.1;locus_tag=NDY24_07995;product=30S ribosomal protein S21;protein_id=UUE99666.1;transl_table=11 CP098602.1 Genbank gene 1773989 1774435 . + . ID=gene-NDY24_08000;Name=NDY24_08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08000 CP098602.1 Protein Homology CDS 1773989 1774435 . + 0 ID=cds-UUE99667.1;Parent=gene-NDY24_08000;Dbxref=NCBI_GP:UUE99667.1;Name=UUE99667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038898.1;locus_tag=NDY24_08000;product=GatB/YqeY domain-containing protein;protein_id=UUE99667.1;transl_table=11 CP098602.1 Genbank gene 1774646 1775632 . + . ID=gene-NDY24_08005;Name=NDY24_08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08005 CP098602.1 Protein Homology CDS 1774646 1775632 . + 0 ID=cds-UUF00326.1;Parent=gene-NDY24_08005;Dbxref=NCBI_GP:UUF00326.1;Name=UUF00326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038899.1;locus_tag=NDY24_08005;product=YihY/virulence factor BrkB family protein;protein_id=UUF00326.1;transl_table=11 CP098602.1 Genbank pseudogene 1775761 1777513 . + . ID=gene-NDY24_08010;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=pseudogene;locus_tag=NDY24_08010;pseudo=true CP098602.1 Protein Homology CDS 1775761 1777513 . + 0 ID=cds-NDY24_08010;Parent=gene-NDY24_08010;Note=frameshifted;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506325.1;locus_tag=NDY24_08010;product=DNA primase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1777625 1778626 . + . ID=gene-NDY24_08015;Name=NDY24_08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08015 CP098602.1 Protein Homology CDS 1777625 1778626 . + 0 ID=cds-UUE99668.1;Parent=gene-NDY24_08015;Dbxref=NCBI_GP:UUE99668.1;Name=UUE99668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449729.1;locus_tag=NDY24_08015;product=bile acid:sodium symporter;protein_id=UUE99668.1;transl_table=11 CP098602.1 Genbank gene 1778895 1780475 . + . ID=gene-NDY24_08020;Name=NDY24_08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08020 CP098602.1 Protein Homology CDS 1778895 1780475 . + 0 ID=cds-UUE99669.1;Parent=gene-NDY24_08020;Dbxref=NCBI_GP:UUE99669.1;Name=UUE99669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174430.1;locus_tag=NDY24_08020;product=thioredoxin family protein;protein_id=UUE99669.1;transl_table=11 CP098602.1 Genbank gene 1780679 1781575 . - . ID=gene-NDY24_08025;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=NDY24_08025 CP098602.1 Protein Homology CDS 1780679 1781575 . - 0 ID=cds-UUE99670.1;Parent=gene-NDY24_08025;Dbxref=NCBI_GP:UUE99670.1;Name=UUE99670.1;Ontology_term=GO:0006783,GO:0008495;gbkey=CDS;gene=cyoE;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme biosynthetic process|0006783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966545.1;locus_tag=NDY24_08025;product=heme o synthase;protein_id=UUE99670.1;transl_table=11 CP098602.1 Genbank gene 1781578 1782741 . - . ID=gene-NDY24_08030;Name=NDY24_08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08030 CP098602.1 Protein Homology CDS 1781578 1782741 . - 0 ID=cds-UUE99671.1;Parent=gene-NDY24_08030;Dbxref=NCBI_GP:UUE99671.1;Name=UUE99671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019238044.1;locus_tag=NDY24_08030;product=COX15/CtaA family protein;protein_id=UUE99671.1;transl_table=11 CP098602.1 Genbank gene 1782752 1783327 . - . ID=gene-NDY24_08035;Name=NDY24_08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08035 CP098602.1 Protein Homology CDS 1782752 1783327 . - 0 ID=cds-UUE99672.1;Parent=gene-NDY24_08035;Dbxref=NCBI_GP:UUE99672.1;Name=UUE99672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303937.1;locus_tag=NDY24_08035;product=hypothetical protein;protein_id=UUE99672.1;transl_table=11 CP098602.1 Genbank gene 1783355 1784080 . - . ID=gene-NDY24_08040;Name=NDY24_08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08040 CP098602.1 Protein Homology CDS 1783355 1784080 . - 0 ID=cds-UUE99673.1;Parent=gene-NDY24_08040;Dbxref=NCBI_GP:UUE99673.1;Name=UUE99673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172044.1;locus_tag=NDY24_08040;product=SURF1 family protein;protein_id=UUE99673.1;transl_table=11 CP098602.1 Genbank gene 1784141 1784359 . + . ID=gene-NDY24_08045;Name=NDY24_08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08045 CP098602.1 Protein Homology CDS 1784141 1784359 . + 0 ID=cds-UUE99674.1;Parent=gene-NDY24_08045;Dbxref=NCBI_GP:UUE99674.1;Name=UUE99674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157720.1;locus_tag=NDY24_08045;product=twin transmembrane helix small protein;protein_id=UUE99674.1;transl_table=11 CP098602.1 Genbank gene 1784436 1785311 . - . ID=gene-NDY24_08050;Name=NDY24_08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08050 CP098602.1 Protein Homology CDS 1784436 1785311 . - 0 ID=cds-UUE99675.1;Parent=gene-NDY24_08050;Dbxref=NCBI_GP:UUE99675.1;Name=UUE99675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501710.1;locus_tag=NDY24_08050;product=cytochrome c oxidase subunit 3;protein_id=UUE99675.1;transl_table=11 CP098602.1 Genbank gene 1785351 1785947 . - . ID=gene-NDY24_08055;Name=NDY24_08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08055 CP098602.1 Protein Homology CDS 1785351 1785947 . - 0 ID=cds-UUE99676.1;Parent=gene-NDY24_08055;Dbxref=NCBI_GP:UUE99676.1;Name=UUE99676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163727.1;locus_tag=NDY24_08055;product=cytochrome c oxidase assembly protein;protein_id=UUE99676.1;transl_table=11 CP098602.1 Genbank gene 1785944 1786117 . - . ID=gene-NDY24_08060;Name=NDY24_08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08060 CP098602.1 Protein Homology CDS 1785944 1786117 . - 0 ID=cds-UUE99677.1;Parent=gene-NDY24_08060;Dbxref=NCBI_GP:UUE99677.1;Name=UUE99677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484652.1;locus_tag=NDY24_08060;product=hypothetical protein;protein_id=UUE99677.1;transl_table=11 CP098602.1 Genbank gene 1786098 1787702 . - . ID=gene-NDY24_08065;Name=ctaD;gbkey=Gene;gene=ctaD;gene_biotype=protein_coding;locus_tag=NDY24_08065 CP098602.1 Protein Homology CDS 1786098 1787702 . - 0 ID=cds-UUE99678.1;Parent=gene-NDY24_08065;Dbxref=NCBI_GP:UUE99678.1;Name=UUE99678.1;Ontology_term=GO:0004129;gbkey=CDS;gene=ctaD;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501708.1;locus_tag=NDY24_08065;product=cytochrome c oxidase subunit I;protein_id=UUE99678.1;transl_table=11 CP098602.1 Genbank gene 1787742 1788695 . - . ID=gene-NDY24_08070;Name=coxB;gbkey=Gene;gene=coxB;gene_biotype=protein_coding;locus_tag=NDY24_08070 CP098602.1 Protein Homology CDS 1787742 1788695 . - 0 ID=cds-UUE99679.1;Parent=gene-NDY24_08070;Dbxref=NCBI_GP:UUE99679.1;Name=UUE99679.1;Ontology_term=GO:0004129;gbkey=CDS;gene=coxB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157718.1;locus_tag=NDY24_08070;product=cytochrome c oxidase subunit II;protein_id=UUE99679.1;transl_table=11 CP098602.1 Genbank gene 1788712 1789188 . - . ID=gene-NDY24_08075;Name=NDY24_08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08075 CP098602.1 Protein Homology CDS 1788712 1789188 . - 0 ID=cds-UUF00327.1;Parent=gene-NDY24_08075;Dbxref=NCBI_GP:UUF00327.1;Name=UUF00327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484655.1;locus_tag=NDY24_08075;product=DUF2244 domain-containing protein;protein_id=UUF00327.1;transl_table=11 CP098602.1 Genbank pseudogene 1789467 1792667 . + . ID=gene-NDY24_08080;Name=putA;gbkey=Gene;gene=putA;gene_biotype=pseudogene;locus_tag=NDY24_08080;pseudo=true CP098602.1 Protein Homology CDS 1789467 1792667 . + 0 ID=cds-NDY24_08080;Parent=gene-NDY24_08080;Note=internal stop;Ontology_term=GO:0006355,GO:0010133,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA,proline catabolic process to glutamate|0010133||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301724.1;locus_tag=NDY24_08080;product=bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1793211 1793325 . - . ID=gene-NDY24_08085;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NDY24_08085 CP098602.1 cmsearch rRNA 1793211 1793325 . - . ID=rna-NDY24_08085;Parent=gene-NDY24_08085;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_08085;product=5S ribosomal RNA CP098602.1 cmsearch exon 1793211 1793325 . - . ID=exon-NDY24_08085-1;Parent=rna-NDY24_08085;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_08085;product=5S ribosomal RNA CP098602.1 Genbank gene 1793499 1796381 . - . ID=gene-NDY24_08090;Name=NDY24_08090;gbkey=Gene;gene_biotype=rRNA;locus_tag=NDY24_08090 CP098602.1 cmsearch rRNA 1793499 1796381 . - . ID=rna-NDY24_08090;Parent=gene-NDY24_08090;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_08090;product=23S ribosomal RNA CP098602.1 cmsearch exon 1793499 1796381 . - . ID=exon-NDY24_08090-1;Parent=rna-NDY24_08090;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_08090;product=23S ribosomal RNA CP098602.1 Genbank gene 1796609 1796685 . - . ID=gene-NDY24_08095;Name=NDY24_08095;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_08095 CP098602.1 tRNAscan-SE tRNA 1796609 1796685 . - . ID=rna-NDY24_08095;Parent=gene-NDY24_08095;anticodon=(pos:complement(1796649..1796651));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_08095;product=tRNA-Ile CP098602.1 tRNAscan-SE exon 1796609 1796685 . - . ID=exon-NDY24_08095-1;Parent=rna-NDY24_08095;anticodon=(pos:complement(1796649..1796651));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_08095;product=tRNA-Ile CP098602.1 Genbank gene 1796705 1796780 . - . ID=gene-NDY24_08100;Name=NDY24_08100;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_08100 CP098602.1 tRNAscan-SE tRNA 1796705 1796780 . - . ID=rna-NDY24_08100;Parent=gene-NDY24_08100;anticodon=(pos:complement(1796745..1796747));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_08100;product=tRNA-Ala CP098602.1 tRNAscan-SE exon 1796705 1796780 . - . ID=exon-NDY24_08100-1;Parent=rna-NDY24_08100;anticodon=(pos:complement(1796745..1796747));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_08100;product=tRNA-Ala CP098602.1 Genbank gene 1796873 1798419 . - . ID=gene-NDY24_08105;Name=NDY24_08105;gbkey=Gene;gene_biotype=rRNA;locus_tag=NDY24_08105 CP098602.1 cmsearch rRNA 1796873 1798419 . - . ID=rna-NDY24_08105;Parent=gene-NDY24_08105;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_08105;product=16S ribosomal RNA CP098602.1 cmsearch exon 1796873 1798419 . - . ID=exon-NDY24_08105-1;Parent=rna-NDY24_08105;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_08105;product=16S ribosomal RNA CP098602.1 Genbank gene 1799143 1800354 . - . ID=gene-NDY24_08110;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=NDY24_08110 CP098602.1 Protein Homology CDS 1799143 1800354 . - 0 ID=cds-UUE99680.1;Parent=gene-NDY24_08110;Dbxref=NCBI_GP:UUE99680.1;Name=UUE99680.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407458.1;locus_tag=NDY24_08110;product=tyrosine--tRNA ligase;protein_id=UUE99680.1;transl_table=11 CP098602.1 Genbank gene 1800525 1801943 . + . ID=gene-NDY24_08115;Name=NDY24_08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08115 CP098602.1 Protein Homology CDS 1800525 1801943 . + 0 ID=cds-UUE99681.1;Parent=gene-NDY24_08115;Dbxref=NCBI_GP:UUE99681.1;Name=UUE99681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115461.1;locus_tag=NDY24_08115;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=UUE99681.1;transl_table=11 CP098602.1 Genbank gene 1802018 1803160 . + . ID=gene-NDY24_08120;Name=NDY24_08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08120 CP098602.1 Protein Homology CDS 1802018 1803160 . + 0 ID=cds-UUE99682.1;Parent=gene-NDY24_08120;Dbxref=NCBI_GP:UUE99682.1;Name=UUE99682.1;Ontology_term=GO:0006040,GO:0009254,GO:0005524,GO:0016773;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348848.1;locus_tag=NDY24_08120;product=anhydro-N-acetylmuramic acid kinase;protein_id=UUE99682.1;transl_table=11 CP098602.1 Genbank gene 1803421 1803648 . - . ID=gene-NDY24_08125;Name=NDY24_08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08125 CP098602.1 Protein Homology CDS 1803421 1803648 . - 0 ID=cds-UUE99683.1;Parent=gene-NDY24_08125;Dbxref=NCBI_GP:UUE99683.1;Name=UUE99683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489057.1;locus_tag=NDY24_08125;product=hypothetical protein;protein_id=UUE99683.1;transl_table=11 CP098602.1 Genbank gene 1803720 1805087 . - . ID=gene-NDY24_08130;Name=NDY24_08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08130 CP098602.1 Protein Homology CDS 1803720 1805087 . - 0 ID=cds-UUE99684.1;Parent=gene-NDY24_08130;Dbxref=NCBI_GP:UUE99684.1;Name=UUE99684.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010486871.1;locus_tag=NDY24_08130;product=MFS transporter;protein_id=UUE99684.1;transl_table=11 CP098602.1 Genbank gene 1805084 1805884 . - . ID=gene-NDY24_08135;Name=NDY24_08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08135 CP098602.1 Protein Homology CDS 1805084 1805884 . - 0 ID=cds-UUE99685.1;Parent=gene-NDY24_08135;Dbxref=NCBI_GP:UUE99685.1;Name=UUE99685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930855.1;locus_tag=NDY24_08135;product=exodeoxyribonuclease III;protein_id=UUE99685.1;transl_table=11 CP098602.1 Genbank gene 1806005 1806664 . + . ID=gene-NDY24_08140;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=NDY24_08140 CP098602.1 Protein Homology CDS 1806005 1806664 . + 0 ID=cds-UUE99686.1;Parent=gene-NDY24_08140;Dbxref=NCBI_GP:UUE99686.1;Name=UUE99686.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374714.1;locus_tag=NDY24_08140;product=orotate phosphoribosyltransferase;protein_id=UUE99686.1;transl_table=11 CP098602.1 Genbank gene 1806687 1807367 . + . ID=gene-NDY24_08145;Name=NDY24_08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08145 CP098602.1 Protein Homology CDS 1806687 1807367 . + 0 ID=cds-UUE99687.1;Parent=gene-NDY24_08145;Dbxref=NCBI_GP:UUE99687.1;Name=UUE99687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017173549.1;locus_tag=NDY24_08145;product=hypothetical protein;protein_id=UUE99687.1;transl_table=11 CP098602.1 Genbank gene 1807483 1808280 . + . ID=gene-NDY24_08150;Name=NDY24_08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08150 CP098602.1 Protein Homology CDS 1807483 1808280 . + 0 ID=cds-UUE99688.1;Parent=gene-NDY24_08150;Dbxref=NCBI_GP:UUE99688.1;Name=UUE99688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914407.1;locus_tag=NDY24_08150;product=AAA family ATPase;protein_id=UUE99688.1;transl_table=11 CP098602.1 Genbank gene 1808280 1809209 . + . ID=gene-NDY24_08155;Name=NDY24_08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08155 CP098602.1 Protein Homology CDS 1808280 1809209 . + 0 ID=cds-UUE99689.1;Parent=gene-NDY24_08155;Dbxref=NCBI_GP:UUE99689.1;Name=UUE99689.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163137.1;locus_tag=NDY24_08155;product=ParB/RepB/Spo0J family partition protein;protein_id=UUE99689.1;transl_table=11 CP098602.1 Genbank gene 1809244 1809552 . + . ID=gene-NDY24_08160;Name=NDY24_08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08160 CP098602.1 Protein Homology CDS 1809244 1809552 . + 0 ID=cds-UUE99690.1;Parent=gene-NDY24_08160;Dbxref=NCBI_GP:UUE99690.1;Name=UUE99690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901959.1;locus_tag=NDY24_08160;product=helix-hairpin-helix domain-containing protein;protein_id=UUE99690.1;transl_table=11 CP098602.1 Genbank gene 1809652 1810617 . + . ID=gene-NDY24_08165;Name=NDY24_08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08165 CP098602.1 Protein Homology CDS 1809652 1810617 . + 0 ID=cds-UUE99691.1;Parent=gene-NDY24_08165;Dbxref=NCBI_GP:UUE99691.1;Name=UUE99691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169566.1;locus_tag=NDY24_08165;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=UUE99691.1;transl_table=11 CP098602.1 Genbank gene 1810752 1811474 . + . ID=gene-NDY24_08170;Name=NDY24_08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08170 CP098602.1 Protein Homology CDS 1810752 1811474 . + 0 ID=cds-UUE99692.1;Parent=gene-NDY24_08170;Dbxref=NCBI_GP:UUE99692.1;Name=UUE99692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038929.1;locus_tag=NDY24_08170;product=glycosyltransferase family 2 protein;protein_id=UUE99692.1;transl_table=11 CP098602.1 Genbank gene 1811474 1811815 . + . ID=gene-NDY24_08175;Name=NDY24_08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08175 CP098602.1 Protein Homology CDS 1811474 1811815 . + 0 ID=cds-UUE99693.1;Parent=gene-NDY24_08175;Dbxref=NCBI_GP:UUE99693.1;Name=UUE99693.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156759.1;locus_tag=NDY24_08175;product=lipid-A-disaccharide synthase N-terminal domain-containing protein;protein_id=UUE99693.1;transl_table=11 CP098602.1 Genbank gene 1812074 1812607 . + . ID=gene-NDY24_08180;Name=NDY24_08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08180 CP098602.1 Protein Homology CDS 1812074 1812607 . + 0 ID=cds-UUE99694.1;Parent=gene-NDY24_08180;Dbxref=NCBI_GP:UUE99694.1;Name=UUE99694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448979.1;locus_tag=NDY24_08180;product=hypothetical protein;protein_id=UUE99694.1;transl_table=11 CP098602.1 Genbank gene 1812709 1815057 . - . ID=gene-NDY24_08185;Name=NDY24_08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08185 CP098602.1 Protein Homology CDS 1812709 1815057 . - 0 ID=cds-UUE99695.1;Parent=gene-NDY24_08185;Dbxref=NCBI_GP:UUE99695.1;Name=UUE99695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161151.1;locus_tag=NDY24_08185;product=phosphomannomutase/phosphoglucomutase;protein_id=UUE99695.1;transl_table=11 CP098602.1 Genbank gene 1815070 1815537 . - . ID=gene-NDY24_08190;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=NDY24_08190 CP098602.1 Protein Homology CDS 1815070 1815537 . - 0 ID=cds-UUE99696.1;Parent=gene-NDY24_08190;Dbxref=NCBI_GP:UUE99696.1;Name=UUE99696.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091285.1;locus_tag=NDY24_08190;product=dUTP diphosphatase;protein_id=UUE99696.1;transl_table=11 CP098602.1 Genbank gene 1815534 1816793 . - . ID=gene-NDY24_08195;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=NDY24_08195 CP098602.1 Protein Homology CDS 1815534 1816793 . - 0 ID=cds-UUE99697.1;Parent=gene-NDY24_08195;Dbxref=NCBI_GP:UUE99697.1;Name=UUE99697.1;Ontology_term=GO:0015937,GO:0015939,GO:0004632,GO:0004633;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate metabolic process|0015939||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964144.1;locus_tag=NDY24_08195;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=UUE99697.1;transl_table=11 CP098602.1 Genbank gene 1816854 1817567 . + . ID=gene-NDY24_08200;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=NDY24_08200 CP098602.1 Protein Homology CDS 1816854 1817567 . + 0 ID=cds-UUF00328.1;Parent=gene-NDY24_08200;Dbxref=NCBI_GP:UUF00328.1;Name=UUF00328.1;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;gene=radC;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300786.1;locus_tag=NDY24_08200;product=DNA repair protein RadC;protein_id=UUF00328.1;transl_table=11 CP098602.1 Genbank gene 1817654 1819342 . + . ID=gene-NDY24_08205;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=NDY24_08205 CP098602.1 Protein Homology CDS 1817654 1819342 . + 0 ID=cds-UUE99698.1;Parent=gene-NDY24_08205;Dbxref=NCBI_GP:UUE99698.1;Name=UUE99698.1;Ontology_term=GO:0006420,GO:0004814,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300787.1;locus_tag=NDY24_08205;product=arginine--tRNA ligase;protein_id=UUE99698.1;transl_table=11 CP098602.1 Genbank gene 1819388 1820287 . + . ID=gene-NDY24_08210;Name=NDY24_08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08210 CP098602.1 Protein Homology CDS 1819388 1820287 . + 0 ID=cds-UUE99699.1;Parent=gene-NDY24_08210;Dbxref=NCBI_GP:UUE99699.1;Name=UUE99699.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091287.1;locus_tag=NDY24_08210;product=SPOR domain-containing protein;protein_id=UUE99699.1;transl_table=11 CP098602.1 Genbank gene 1820450 1821208 . + . ID=gene-NDY24_08215;Name=NDY24_08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08215 CP098602.1 Protein Homology CDS 1820450 1821208 . + 0 ID=cds-UUE99700.1;Parent=gene-NDY24_08215;Dbxref=NCBI_GP:UUE99700.1;Name=UUE99700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995556.1;locus_tag=NDY24_08215;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=UUE99700.1;transl_table=11 CP098602.1 Genbank gene 1821807 1822646 . + . ID=gene-NDY24_08220;Name=NDY24_08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08220 CP098602.1 Protein Homology CDS 1821807 1822646 . + 0 ID=cds-UUF00329.1;Parent=gene-NDY24_08220;Dbxref=NCBI_GP:UUF00329.1;Name=UUF00329.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019335.2;locus_tag=NDY24_08220;product=TonB-dependent receptor plug domain-containing protein;protein_id=UUF00329.1;transl_table=11 CP098602.1 Genbank pseudogene 1822663 1823723 . + . ID=gene-NDY24_08225;Name=NDY24_08225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_08225;pseudo=true CP098602.1 Protein Homology CDS 1822663 1823723 . + 0 ID=cds-NDY24_08225;Parent=gene-NDY24_08225;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012801.2;locus_tag=NDY24_08225;product=TonB-dependent receptor;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 1823713 1824243 . + . ID=gene-NDY24_08230;Name=NDY24_08230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_08230;pseudo=true CP098602.1 Protein Homology CDS 1823713 1824243 . + 0 ID=cds-NDY24_08230;Parent=gene-NDY24_08230;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014037493.1;locus_tag=NDY24_08230;product=alkyl hydroperoxide reductase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 1824416 1825489 . - . ID=gene-NDY24_08235;Name=NDY24_08235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_08235;pseudo=true CP098602.1 Protein Homology CDS 1824416 1825489 . - 0 ID=cds-NDY24_08235;Parent=gene-NDY24_08235;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504972.1;locus_tag=NDY24_08235;product=acyltransferase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1825765 1827102 . - . ID=gene-NDY24_08240;Name=NDY24_08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08240 CP098602.1 Protein Homology CDS 1825765 1827102 . - 0 ID=cds-UUE99701.1;Parent=gene-NDY24_08240;Dbxref=NCBI_GP:UUE99701.1;Name=UUE99701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922461.1;locus_tag=NDY24_08240;product=glycosyltransferase;protein_id=UUE99701.1;transl_table=11 CP098602.1 Genbank gene 1827095 1831078 . - . ID=gene-NDY24_08245;Name=NDY24_08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08245 CP098602.1 Protein Homology CDS 1827095 1831078 . - 0 ID=cds-UUE99702.1;Parent=gene-NDY24_08245;Dbxref=NCBI_GP:UUE99702.1;Name=UUE99702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019238053.1;locus_tag=NDY24_08245;product=non-ribosomal peptide synthetase;protein_id=UUE99702.1;transl_table=11 CP098602.1 Genbank gene 1832034 1833920 . - . ID=gene-NDY24_08250;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=NDY24_08250 CP098602.1 Protein Homology CDS 1832034 1833920 . - 0 ID=cds-UUE99703.1;Parent=gene-NDY24_08250;Dbxref=NCBI_GP:UUE99703.1;Name=UUE99703.1;Ontology_term=GO:0008295,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038943.1;locus_tag=NDY24_08250;product=arginine decarboxylase;protein_id=UUE99703.1;transl_table=11 CP098602.1 Genbank gene 1834155 1835012 . + . ID=gene-NDY24_08255;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=NDY24_08255 CP098602.1 Protein Homology CDS 1834155 1835012 . + 0 ID=cds-UUE99704.1;Parent=gene-NDY24_08255;Dbxref=NCBI_GP:UUE99704.1;Name=UUE99704.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305070.1;locus_tag=NDY24_08255;product=polyamine aminopropyltransferase;protein_id=UUE99704.1;transl_table=11 CP098602.1 Genbank gene 1835244 1835855 . - . ID=gene-NDY24_08260;Name=NDY24_08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08260 CP098602.1 Protein Homology CDS 1835244 1835855 . - 0 ID=cds-UUE99705.1;Parent=gene-NDY24_08260;Dbxref=NCBI_GP:UUE99705.1;Name=UUE99705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305069.1;locus_tag=NDY24_08260;product=PH domain-containing protein;protein_id=UUE99705.1;transl_table=11 CP098602.1 Genbank gene 1836053 1836862 . - . ID=gene-NDY24_08265;Name=NDY24_08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08265 CP098602.1 Protein Homology CDS 1836053 1836862 . - 0 ID=cds-UUE99706.1;Parent=gene-NDY24_08265;Dbxref=NCBI_GP:UUE99706.1;Name=UUE99706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914384.1;locus_tag=NDY24_08265;product=porin family protein;protein_id=UUE99706.1;transl_table=11 CP098602.1 Genbank gene 1837426 1838109 . + . ID=gene-NDY24_08270;Name=NDY24_08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08270 CP098602.1 Protein Homology CDS 1837426 1838109 . + 0 ID=cds-UUE99707.1;Parent=gene-NDY24_08270;Dbxref=NCBI_GP:UUE99707.1;Name=UUE99707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448994.1;locus_tag=NDY24_08270;product=kinase;protein_id=UUE99707.1;transl_table=11 CP098602.1 Genbank pseudogene 1838451 1840425 . - . ID=gene-NDY24_08275;Name=NDY24_08275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_08275;pseudo=true CP098602.1 Protein Homology CDS 1838451 1840425 . - 0 ID=cds-NDY24_08275;Parent=gene-NDY24_08275;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015471473.1;locus_tag=NDY24_08275;product=beta-N-acetylglucosaminidase domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1840796 1841134 . - . ID=gene-NDY24_08280;Name=NDY24_08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08280 CP098602.1 Protein Homology CDS 1840796 1841134 . - 0 ID=cds-UUE99708.1;Parent=gene-NDY24_08280;Dbxref=NCBI_GP:UUE99708.1;Name=UUE99708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414756.1;locus_tag=NDY24_08280;product=P-II family nitrogen regulator;protein_id=UUE99708.1;transl_table=11 CP098602.1 Genbank gene 1841324 1841602 . + . ID=gene-NDY24_08285;Name=NDY24_08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08285 CP098602.1 Protein Homology CDS 1841324 1841602 . + 0 ID=cds-UUE99709.1;Parent=gene-NDY24_08285;Dbxref=NCBI_GP:UUE99709.1;Name=UUE99709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156738.1;locus_tag=NDY24_08285;product=accessory factor UbiK family protein;protein_id=UUE99709.1;transl_table=11 CP098602.1 Genbank gene 1841619 1843139 . + . ID=gene-NDY24_08290;Name=NDY24_08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08290 CP098602.1 Protein Homology CDS 1841619 1843139 . + 0 ID=cds-UUE99710.1;Parent=gene-NDY24_08290;Dbxref=NCBI_GP:UUE99710.1;Name=UUE99710.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005989245.1;locus_tag=NDY24_08290;product=YifB family Mg chelatase-like AAA ATPase;protein_id=UUE99710.1;transl_table=11 CP098602.1 Genbank gene 1843229 1843738 . + . ID=gene-NDY24_08295;Name=NDY24_08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08295 CP098602.1 Protein Homology CDS 1843229 1843738 . + 0 ID=cds-UUE99711.1;Parent=gene-NDY24_08295;Dbxref=NCBI_GP:UUE99711.1;Name=UUE99711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091298.1;locus_tag=NDY24_08295;product=lipocalin family protein;protein_id=UUE99711.1;transl_table=11 CP098602.1 Genbank gene 1844236 1844412 . - . ID=gene-NDY24_08300;Name=NDY24_08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08300 CP098602.1 Protein Homology CDS 1844236 1844412 . - 0 ID=cds-UUE99712.1;Parent=gene-NDY24_08300;Dbxref=NCBI_GP:UUE99712.1;Name=UUE99712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374782.1;locus_tag=NDY24_08300;product=hypothetical protein;protein_id=UUE99712.1;transl_table=11 CP098602.1 Genbank gene 1844797 1846392 . + . ID=gene-NDY24_08305;Name=NDY24_08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08305 CP098602.1 Protein Homology CDS 1844797 1846392 . + 0 ID=cds-UUE99713.1;Parent=gene-NDY24_08305;Dbxref=NCBI_GP:UUE99713.1;Name=UUE99713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449001.1;locus_tag=NDY24_08305;product=EAL domain-containing protein;protein_id=UUE99713.1;transl_table=11 CP098602.1 Genbank gene 1846611 1847735 . - . ID=gene-NDY24_08310;Name=NDY24_08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08310 CP098602.1 Protein Homology CDS 1846611 1847735 . - 0 ID=cds-UUE99714.1;Parent=gene-NDY24_08310;Dbxref=NCBI_GP:UUE99714.1;Name=UUE99714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348875.1;locus_tag=NDY24_08310;product=acyl-CoA desaturase;protein_id=UUE99714.1;transl_table=11 CP098602.1 Genbank gene 1847745 1848821 . - . ID=gene-NDY24_08315;Name=NDY24_08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08315 CP098602.1 Protein Homology CDS 1847745 1848821 . - 0 ID=cds-UUE99715.1;Parent=gene-NDY24_08315;Dbxref=NCBI_GP:UUE99715.1;Name=UUE99715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974569.1;locus_tag=NDY24_08315;product=ferredoxin reductase;protein_id=UUE99715.1;transl_table=11 CP098602.1 Genbank gene 1848915 1849562 . + . ID=gene-NDY24_08320;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=NDY24_08320 CP098602.1 Protein Homology CDS 1848915 1849562 . + 0 ID=cds-UUE99716.1;Parent=gene-NDY24_08320;Dbxref=NCBI_GP:UUE99716.1;Name=UUE99716.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374793.1;locus_tag=NDY24_08320;product=HTH-type transcriptional repressor FabR;protein_id=UUE99716.1;transl_table=11 CP098602.1 Genbank gene 1850230 1851051 . + . ID=gene-NDY24_08325;Name=NDY24_08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08325 CP098602.1 Protein Homology CDS 1850230 1851051 . + 0 ID=cds-UUE99717.1;Parent=gene-NDY24_08325;Dbxref=NCBI_GP:UUE99717.1;Name=UUE99717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902664.1;locus_tag=NDY24_08325;product=hypothetical protein;protein_id=UUE99717.1;transl_table=11 CP098602.1 Genbank gene 1851183 1852049 . - . ID=gene-NDY24_08330;Name=NDY24_08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08330 CP098602.1 Protein Homology CDS 1851183 1852049 . - 0 ID=cds-UUE99718.1;Parent=gene-NDY24_08330;Dbxref=NCBI_GP:UUE99718.1;Name=UUE99718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038960.1;locus_tag=NDY24_08330;product=alpha/beta fold hydrolase;protein_id=UUE99718.1;transl_table=11 CP098602.1 Genbank gene 1852049 1853134 . - . ID=gene-NDY24_08335;Name=NDY24_08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08335 CP098602.1 Protein Homology CDS 1852049 1853134 . - 0 ID=cds-UUE99719.1;Parent=gene-NDY24_08335;Dbxref=NCBI_GP:UUE99719.1;Name=UUE99719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052641.1;locus_tag=NDY24_08335;product=DUF3182 family protein;protein_id=UUE99719.1;transl_table=11 CP098602.1 Genbank gene 1853806 1854066 . + . ID=gene-NDY24_08340;Name=NDY24_08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08340 CP098602.1 Protein Homology CDS 1853806 1854066 . + 0 ID=cds-UUF00330.1;Parent=gene-NDY24_08340;Dbxref=NCBI_GP:UUF00330.1;Name=UUF00330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809572.1;locus_tag=NDY24_08340;product=hypothetical protein;protein_id=UUF00330.1;transl_table=11 CP098602.1 Genbank gene 1854110 1854376 . + . ID=gene-NDY24_08345;Name=NDY24_08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08345 CP098602.1 Protein Homology CDS 1854110 1854376 . + 0 ID=cds-UUE99720.1;Parent=gene-NDY24_08345;Dbxref=NCBI_GP:UUE99720.1;Name=UUE99720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850754.1;locus_tag=NDY24_08345;product=hypothetical protein;protein_id=UUE99720.1;transl_table=11 CP098602.1 Genbank gene 1854476 1855069 . + . ID=gene-NDY24_08350;Name=NDY24_08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08350 CP098602.1 Protein Homology CDS 1854476 1855069 . + 0 ID=cds-UUE99721.1;Parent=gene-NDY24_08350;Dbxref=NCBI_GP:UUE99721.1;Name=UUE99721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158206.1;locus_tag=NDY24_08350;product=DUF4142 domain-containing protein;protein_id=UUE99721.1;transl_table=11 CP098602.1 Genbank gene 1855259 1856146 . + . ID=gene-NDY24_08355;Name=NDY24_08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08355 CP098602.1 Protein Homology CDS 1855259 1856146 . + 0 ID=cds-UUE99722.1;Parent=gene-NDY24_08355;Dbxref=NCBI_GP:UUE99722.1;Name=UUE99722.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159091.1;locus_tag=NDY24_08355;product=TIGR01777 family oxidoreductase;protein_id=UUE99722.1;transl_table=11 CP098602.1 Genbank gene 1856298 1856963 . + . ID=gene-NDY24_08360;Name=NDY24_08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08360 CP098602.1 Protein Homology CDS 1856298 1856963 . + 0 ID=cds-UUE99723.1;Parent=gene-NDY24_08360;Dbxref=NCBI_GP:UUE99723.1;Name=UUE99723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091309.1;locus_tag=NDY24_08360;product=response regulator transcription factor;protein_id=UUE99723.1;transl_table=11 CP098602.1 Genbank pseudogene 1856960 1858161 . + . ID=gene-NDY24_08365;Name=NDY24_08365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_08365;pseudo=true CP098602.1 Protein Homology CDS 1856960 1858161 . + 0 ID=cds-NDY24_08365;Parent=gene-NDY24_08365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158209.1;locus_tag=NDY24_08365;product=ATP-binding protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1858262 1858552 . + . ID=gene-NDY24_08370;Name=NDY24_08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08370 CP098602.1 Protein Homology CDS 1858262 1858552 . + 0 ID=cds-UUE99724.1;Parent=gene-NDY24_08370;Dbxref=NCBI_GP:UUE99724.1;Name=UUE99724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005932284.1;locus_tag=NDY24_08370;product=hypothetical protein;protein_id=UUE99724.1;transl_table=11 CP098602.1 Genbank gene 1858613 1859275 . + . ID=gene-NDY24_08375;Name=NDY24_08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08375 CP098602.1 Protein Homology CDS 1858613 1859275 . + 0 ID=cds-UUE99725.1;Parent=gene-NDY24_08375;Dbxref=NCBI_GP:UUE99725.1;Name=UUE99725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038971.1;locus_tag=NDY24_08375;product=DUF3313 domain-containing protein;protein_id=UUE99725.1;transl_table=11 CP098602.1 Genbank gene 1859471 1860322 . - . ID=gene-NDY24_08380;Name=NDY24_08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08380 CP098602.1 Protein Homology CDS 1859471 1860322 . - 0 ID=cds-UUE99726.1;Parent=gene-NDY24_08380;Dbxref=NCBI_GP:UUE99726.1;Name=UUE99726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052649.1;locus_tag=NDY24_08380;product=histidine biosynthesis protein HisIE;protein_id=UUE99726.1;transl_table=11 CP098602.1 Genbank gene 1860565 1862001 . + . ID=gene-NDY24_08385;Name=NDY24_08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08385 CP098602.1 Protein Homology CDS 1860565 1862001 . + 0 ID=cds-UUE99727.1;Parent=gene-NDY24_08385;Dbxref=NCBI_GP:UUE99727.1;Name=UUE99727.1;Ontology_term=GO:0006508,GO:0006950,GO:0004252,GO:0005515,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257055.1;locus_tag=NDY24_08385;product=Do family serine endopeptidase;protein_id=UUE99727.1;transl_table=11 CP098602.1 Genbank gene 1862117 1862479 . + . ID=gene-NDY24_08390;Name=NDY24_08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08390 CP098602.1 Protein Homology CDS 1862117 1862479 . + 0 ID=cds-UUE99728.1;Parent=gene-NDY24_08390;Dbxref=NCBI_GP:UUE99728.1;Name=UUE99728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966985.1;locus_tag=NDY24_08390;product=hypothetical protein;protein_id=UUE99728.1;transl_table=11 CP098602.1 Genbank gene 1862483 1862971 . + . ID=gene-NDY24_08395;Name=NDY24_08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08395 CP098602.1 Protein Homology CDS 1862483 1862971 . + 0 ID=cds-UUE99729.1;Parent=gene-NDY24_08395;Dbxref=NCBI_GP:UUE99729.1;Name=UUE99729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115391.1;locus_tag=NDY24_08395;product=phage holin family protein;protein_id=UUE99729.1;transl_table=11 CP098602.1 Genbank gene 1862968 1863351 . + . ID=gene-NDY24_08400;Name=NDY24_08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08400 CP098602.1 Protein Homology CDS 1862968 1863351 . + 0 ID=cds-UUE99730.1;Parent=gene-NDY24_08400;Dbxref=NCBI_GP:UUE99730.1;Name=UUE99730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117789.1;locus_tag=NDY24_08400;product=hypothetical protein;protein_id=UUE99730.1;transl_table=11 CP098602.1 Genbank gene 1863524 1864630 . + . ID=gene-NDY24_08405;Name=NDY24_08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08405 CP098602.1 Protein Homology CDS 1863524 1864630 . + 0 ID=cds-UUE99731.1;Parent=gene-NDY24_08405;Dbxref=NCBI_GP:UUE99731.1;Name=UUE99731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809543.1;locus_tag=NDY24_08405;product=AI-2E family transporter;protein_id=UUE99731.1;transl_table=11 CP098602.1 Genbank gene 1864724 1865461 . + . ID=gene-NDY24_08410;Name=NDY24_08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08410 CP098602.1 Protein Homology CDS 1864724 1865461 . + 0 ID=cds-UUE99732.1;Parent=gene-NDY24_08410;Dbxref=NCBI_GP:UUE99732.1;Name=UUE99732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257383.1;locus_tag=NDY24_08410;product=HAD family hydrolase;protein_id=UUE99732.1;transl_table=11 CP098602.1 Genbank gene 1865504 1866874 . + . ID=gene-NDY24_08415;Name=NDY24_08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08415 CP098602.1 Protein Homology CDS 1865504 1866874 . + 0 ID=cds-UUE99733.1;Parent=gene-NDY24_08415;Dbxref=NCBI_GP:UUE99733.1;Name=UUE99733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486560.1;locus_tag=NDY24_08415;product=leucyl aminopeptidase family protein;protein_id=UUE99733.1;transl_table=11 CP098602.1 Genbank gene 1866934 1867257 . + . ID=gene-NDY24_08420;Name=NDY24_08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08420 CP098602.1 Protein Homology CDS 1866934 1867257 . + 0 ID=cds-UUE99734.1;Parent=gene-NDY24_08420;Dbxref=NCBI_GP:UUE99734.1;Name=UUE99734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118446.1;locus_tag=NDY24_08420;product=hypothetical protein;protein_id=UUE99734.1;transl_table=11 CP098602.1 Genbank gene 1867490 1868632 . + . ID=gene-NDY24_08425;Name=NDY24_08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08425 CP098602.1 Protein Homology CDS 1867490 1868632 . + 0 ID=cds-UUE99735.1;Parent=gene-NDY24_08425;Dbxref=NCBI_GP:UUE99735.1;Name=UUE99735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038980.1;locus_tag=NDY24_08425;product=catalase family peroxidase;protein_id=UUE99735.1;transl_table=11 CP098602.1 Genbank gene 1868581 1869123 . + . ID=gene-NDY24_08430;Name=NDY24_08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08430 CP098602.1 Protein Homology CDS 1868581 1869123 . + 0 ID=cds-UUE99736.1;Parent=gene-NDY24_08430;Dbxref=NCBI_GP:UUE99736.1;Name=UUE99736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379264.1;locus_tag=NDY24_08430;product=cytochrome b;protein_id=UUE99736.1;transl_table=11 CP098602.1 Genbank pseudogene 1869412 1870193 . - . ID=gene-NDY24_08435;Name=NDY24_08435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_08435;pseudo=true CP098602.1 Protein Homology CDS 1869412 1870193 . - 0 ID=cds-NDY24_08435;Parent=gene-NDY24_08435;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850766.1;locus_tag=NDY24_08435;product=ThuA domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1870260 1870336 . - . ID=gene-NDY24_08440;Name=NDY24_08440;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_08440 CP098602.1 cmsearch ncRNA 1870260 1870336 . - . ID=rna-NDY24_08440;Parent=gene-NDY24_08440;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_08440;product=sX9 sRNA CP098602.1 cmsearch exon 1870260 1870336 . - . ID=exon-NDY24_08440-1;Parent=rna-NDY24_08440;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_08440;product=sX9 sRNA CP098602.1 Genbank gene 1870514 1871116 . - . ID=gene-NDY24_08445;Name=NDY24_08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08445 CP098602.1 Protein Homology CDS 1870514 1871116 . - 0 ID=cds-UUE99737.1;Parent=gene-NDY24_08445;Dbxref=NCBI_GP:UUE99737.1;Name=UUE99737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486570.1;locus_tag=NDY24_08445;product=response regulator transcription factor;protein_id=UUE99737.1;transl_table=11 CP098602.1 Genbank gene 1871208 1872395 . - . ID=gene-NDY24_08450;Name=NDY24_08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08450 CP098602.1 Protein Homology CDS 1871208 1872395 . - 0 ID=cds-UUE99738.1;Parent=gene-NDY24_08450;Dbxref=NCBI_GP:UUE99738.1;Name=UUE99738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448818.1;locus_tag=NDY24_08450;product=sensor histidine kinase;protein_id=UUE99738.1;transl_table=11 CP098602.1 Genbank gene 1872831 1874075 . + . ID=gene-NDY24_08455;Name=NDY24_08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08455 CP098602.1 Protein Homology CDS 1872831 1874075 . + 0 ID=cds-UUE99739.1;Parent=gene-NDY24_08455;Dbxref=NCBI_GP:UUE99739.1;Name=UUE99739.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348902.1;locus_tag=NDY24_08455;product=efflux RND transporter periplasmic adaptor subunit;protein_id=UUE99739.1;transl_table=11 CP098602.1 Genbank gene 1874457 1875146 . + . ID=gene-NDY24_08460;Name=NDY24_08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08460 CP098602.1 Protein Homology CDS 1874457 1875146 . + 0 ID=cds-UUE99740.1;Parent=gene-NDY24_08460;Dbxref=NCBI_GP:UUE99740.1;Name=UUE99740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091323.1;locus_tag=NDY24_08460;product=ABC transporter ATP-binding protein;protein_id=UUE99740.1;transl_table=11 CP098602.1 Genbank gene 1875260 1876240 . - . ID=gene-NDY24_08465;Name=NDY24_08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08465 CP098602.1 Protein Homology CDS 1875260 1876240 . - 0 ID=cds-UUE99741.1;Parent=gene-NDY24_08465;Dbxref=NCBI_GP:UUE99741.1;Name=UUE99741.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=NDY24_08465;product=IS5 family transposase;protein_id=UUE99741.1;transl_table=11 CP098602.1 Genbank gene 1876320 1877480 . + . ID=gene-NDY24_08470;Name=NDY24_08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08470 CP098602.1 Protein Homology CDS 1876320 1877480 . + 0 ID=cds-UUE99742.1;Parent=gene-NDY24_08470;Dbxref=NCBI_GP:UUE99742.1;Name=UUE99742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374852.1;locus_tag=NDY24_08470;product=ABC transporter permease;protein_id=UUE99742.1;transl_table=11 CP098602.1 Genbank gene 1877494 1878813 . + . ID=gene-NDY24_08475;Name=NDY24_08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08475 CP098602.1 Protein Homology CDS 1877494 1878813 . + 0 ID=cds-UUE99743.1;Parent=gene-NDY24_08475;Dbxref=NCBI_GP:UUE99743.1;Name=UUE99743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174380.1;locus_tag=NDY24_08475;product=ABC transporter permease;protein_id=UUE99743.1;transl_table=11 CP098602.1 Genbank gene 1879001 1880116 . + . ID=gene-NDY24_08480;Name=NDY24_08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08480 CP098602.1 Protein Homology CDS 1879001 1880116 . + 0 ID=cds-UUE99744.1;Parent=gene-NDY24_08480;Dbxref=NCBI_GP:UUE99744.1;Name=UUE99744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448813.1;locus_tag=NDY24_08480;product=alpha/beta fold hydrolase;protein_id=UUE99744.1;transl_table=11 CP098602.1 Genbank pseudogene 1880311 1881223 . - . ID=gene-NDY24_08485;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=pseudogene;locus_tag=NDY24_08485;pseudo=true CP098602.1 Protein Homology CDS 1880311 1881223 . - 0 ID=cds-NDY24_08485;Parent=gene-NDY24_08485;Note=frameshifted;Ontology_term=GO:0006810,GO:0005215,GO:0005887;gbkey=CDS;gene=rarD;go_component=integral component of plasma membrane|0005887||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902633.1;locus_tag=NDY24_08485;product=EamA family transporter RarD;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1881220 1882161 . - . ID=gene-NDY24_08490;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=NDY24_08490 CP098602.1 Protein Homology CDS 1881220 1882161 . - 0 ID=cds-UUE99745.1;Parent=gene-NDY24_08490;Dbxref=NCBI_GP:UUE99745.1;Name=UUE99745.1;Ontology_term=GO:0016021;gbkey=CDS;gene=yedA;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158230.1;locus_tag=NDY24_08490;product=drug/metabolite exporter YedA;protein_id=UUE99745.1;transl_table=11 CP098602.1 Genbank gene 1882206 1882676 . + . ID=gene-NDY24_08495;Name=NDY24_08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08495 CP098602.1 Protein Homology CDS 1882206 1882676 . + 0 ID=cds-UUE99746.1;Parent=gene-NDY24_08495;Dbxref=NCBI_GP:UUE99746.1;Name=UUE99746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966947.1;locus_tag=NDY24_08495;product=hypothetical protein;protein_id=UUE99746.1;transl_table=11 CP098602.1 Genbank gene 1882736 1882812 . + . ID=gene-NDY24_08500;Name=NDY24_08500;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_08500 CP098602.1 cmsearch ncRNA 1882736 1882812 . + . ID=rna-NDY24_08500;Parent=gene-NDY24_08500;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_08500;product=sX9 sRNA CP098602.1 cmsearch exon 1882736 1882812 . + . ID=exon-NDY24_08500-1;Parent=rna-NDY24_08500;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_08500;product=sX9 sRNA CP098602.1 Genbank gene 1882925 1884619 . - . ID=gene-NDY24_08505;Name=NDY24_08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08505 CP098602.1 Protein Homology CDS 1882925 1884619 . - 0 ID=cds-UUF00331.1;Parent=gene-NDY24_08505;Dbxref=NCBI_GP:UUF00331.1;Name=UUF00331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158488.1;locus_tag=NDY24_08505;product=M28 family metallopeptidase;protein_id=UUF00331.1;transl_table=11 CP098602.1 Genbank gene 1885402 1886388 . - . ID=gene-NDY24_08510;Name=NDY24_08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08510 CP098602.1 Protein Homology CDS 1885402 1886388 . - 0 ID=cds-UUE99747.1;Parent=gene-NDY24_08510;Dbxref=NCBI_GP:UUE99747.1;Name=UUE99747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407412.1;locus_tag=NDY24_08510;product=MBL fold metallo-hydrolase;protein_id=UUE99747.1;transl_table=11 CP098602.1 Genbank gene 1886547 1887836 . - . ID=gene-NDY24_08515;Name=NDY24_08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08515 CP098602.1 Protein Homology CDS 1886547 1887836 . - 0 ID=cds-UUE99748.1;Parent=gene-NDY24_08515;Dbxref=NCBI_GP:UUE99748.1;Name=UUE99748.1;Ontology_term=GO:0006436,GO:0004830;gbkey=CDS;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966942.1;locus_tag=NDY24_08515;product=tryptophan--tRNA ligase;protein_id=UUE99748.1;transl_table=11 CP098602.1 Genbank gene 1888010 1888219 . - . ID=gene-NDY24_08520;Name=NDY24_08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08520 CP098602.1 Protein Homology CDS 1888010 1888219 . - 0 ID=cds-UUE99749.1;Parent=gene-NDY24_08520;Dbxref=NCBI_GP:UUE99749.1;Name=UUE99749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486601.1;locus_tag=NDY24_08520;product=CsbD family protein;protein_id=UUE99749.1;transl_table=11 CP098602.1 Genbank gene 1888461 1888595 . - . ID=gene-NDY24_08525;Name=NDY24_08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08525 CP098602.1 Protein Homology CDS 1888461 1888595 . - 0 ID=cds-UUE99750.1;Parent=gene-NDY24_08525;Dbxref=NCBI_GP:UUE99750.1;Name=UUE99750.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904515.1;locus_tag=NDY24_08525;product=entericidin A/B family lipoprotein;protein_id=UUE99750.1;transl_table=11 CP098602.1 Genbank gene 1888674 1888826 . - . ID=gene-NDY24_08530;Name=NDY24_08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08530 CP098602.1 Protein Homology CDS 1888674 1888826 . - 0 ID=cds-UUE99751.1;Parent=gene-NDY24_08530;Dbxref=NCBI_GP:UUE99751.1;Name=UUE99751.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374875.1;locus_tag=NDY24_08530;product=entericidin A/B family lipoprotein;protein_id=UUE99751.1;transl_table=11 CP098602.1 Genbank gene 1888936 1889859 . - . ID=gene-NDY24_08535;Name=rocF;gbkey=Gene;gene=rocF;gene_biotype=protein_coding;locus_tag=NDY24_08535 CP098602.1 Protein Homology CDS 1888936 1889859 . - 0 ID=cds-UUE99752.1;Parent=gene-NDY24_08535;Dbxref=NCBI_GP:UUE99752.1;Name=UUE99752.1;Ontology_term=GO:0019547,GO:0004053;gbkey=CDS;gene=rocF;go_function=arginase activity|0004053||IEA;go_process=arginine catabolic process to ornithine|0019547||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005989327.1;locus_tag=NDY24_08535;product=arginase;protein_id=UUE99752.1;transl_table=11 CP098602.1 Genbank gene 1890321 1890773 . + . ID=gene-NDY24_08540;Name=NDY24_08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08540 CP098602.1 Protein Homology CDS 1890321 1890773 . + 0 ID=cds-UUE99753.1;Parent=gene-NDY24_08540;Dbxref=NCBI_GP:UUE99753.1;Name=UUE99753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904517.1;locus_tag=NDY24_08540;product=roadblock/LC7 domain-containing protein;protein_id=UUE99753.1;transl_table=11 CP098602.1 Genbank gene 1890837 1891196 . + . ID=gene-NDY24_08545;Name=NDY24_08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08545 CP098602.1 Protein Homology CDS 1890837 1891196 . + 0 ID=cds-UUE99754.1;Parent=gene-NDY24_08545;Dbxref=NCBI_GP:UUE99754.1;Name=UUE99754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486613.1;locus_tag=NDY24_08545;product=roadblock/LC7 domain-containing protein;protein_id=UUE99754.1;transl_table=11 CP098602.1 Genbank gene 1891288 1892205 . + . ID=gene-NDY24_08550;Name=NDY24_08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08550 CP098602.1 Protein Homology CDS 1891288 1892205 . + 0 ID=cds-UUE99755.1;Parent=gene-NDY24_08550;Dbxref=NCBI_GP:UUE99755.1;Name=UUE99755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374883.1;locus_tag=NDY24_08550;product=hypothetical protein;protein_id=UUE99755.1;transl_table=11 CP098602.1 Genbank gene 1892202 1892744 . + . ID=gene-NDY24_08555;Name=NDY24_08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08555 CP098602.1 Protein Homology CDS 1892202 1892744 . + 0 ID=cds-UUE99756.1;Parent=gene-NDY24_08555;Dbxref=NCBI_GP:UUE99756.1;Name=UUE99756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159094.1;locus_tag=NDY24_08555;product=GTPase;protein_id=UUE99756.1;transl_table=11 CP098602.1 Genbank gene 1893335 1894018 . + . ID=gene-NDY24_08560;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=NDY24_08560 CP098602.1 Protein Homology CDS 1893335 1894018 . + 0 ID=cds-UUE99757.1;Parent=gene-NDY24_08560;Dbxref=NCBI_GP:UUE99757.1;Name=UUE99757.1;Ontology_term=GO:0015949,GO:0004798;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486617.1;locus_tag=NDY24_08560;product=dTMP kinase;protein_id=UUE99757.1;transl_table=11 CP098602.1 Genbank gene 1894340 1894415 . - . ID=gene-NDY24_08565;Name=NDY24_08565;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_08565 CP098602.1 tRNAscan-SE tRNA 1894340 1894415 . - . ID=rna-NDY24_08565;Parent=gene-NDY24_08565;anticodon=(pos:complement(1894380..1894382));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_08565;product=tRNA-Thr CP098602.1 tRNAscan-SE exon 1894340 1894415 . - . ID=exon-NDY24_08565-1;Parent=rna-NDY24_08565;anticodon=(pos:complement(1894380..1894382));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_08565;product=tRNA-Thr CP098602.1 Genbank pseudogene 1894449 1895352 . - . ID=gene-NDY24_08570;Name=NDY24_08570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_08570;pseudo=true CP098602.1 Protein Homology CDS 1894449 1895352 . - 0 ID=cds-NDY24_08570;Parent=gene-NDY24_08570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112291.1;locus_tag=NDY24_08570;product=SPOR domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1895509 1896237 . - . ID=gene-NDY24_08575;Name=NDY24_08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08575 CP098602.1 Protein Homology CDS 1895509 1896237 . - 0 ID=cds-UUE99758.1;Parent=gene-NDY24_08575;Dbxref=NCBI_GP:UUE99758.1;Name=UUE99758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154906.1;locus_tag=NDY24_08575;product=type III pantothenate kinase;protein_id=UUE99758.1;transl_table=11 CP098602.1 Genbank gene 1896234 1897199 . - . ID=gene-NDY24_08580;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=NDY24_08580 CP098602.1 Protein Homology CDS 1896234 1897199 . - 0 ID=cds-UUE99759.1;Parent=gene-NDY24_08580;Dbxref=NCBI_GP:UUE99759.1;Name=UUE99759.1;Ontology_term=GO:0006355,GO:0006464,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin-[acetyl-CoA-carboxylase] ligase activity|0004077||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA,cellular protein modification process|0006464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257360.1;locus_tag=NDY24_08580;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=UUE99759.1;transl_table=11 CP098602.1 Genbank gene 1897319 1897603 . + . ID=gene-NDY24_08585;Name=NDY24_08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08585 CP098602.1 Protein Homology CDS 1897319 1897603 . + 0 ID=cds-UUE99760.1;Parent=gene-NDY24_08585;Dbxref=NCBI_GP:UUE99760.1;Name=UUE99760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154908.1;locus_tag=NDY24_08585;product=hypothetical protein;protein_id=UUE99760.1;transl_table=11 CP098602.1 Genbank gene 1897612 1898367 . + . ID=gene-NDY24_08590;Name=NDY24_08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08590 CP098602.1 Protein Homology CDS 1897612 1898367 . + 0 ID=cds-UUE99761.1;Parent=gene-NDY24_08590;Dbxref=NCBI_GP:UUE99761.1;Name=UUE99761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966931.1;locus_tag=NDY24_08590;product=zinc-dependent peptidase;protein_id=UUE99761.1;transl_table=11 CP098602.1 Genbank pseudogene 1898525 1899711 . - . ID=gene-NDY24_08595;Name=NDY24_08595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_08595;pseudo=true CP098602.1 Protein Homology CDS 1898525 1899711 . - 0 ID=cds-NDY24_08595;Parent=gene-NDY24_08595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304202.1;locus_tag=NDY24_08595;product=DUF1501 domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1899782 1901374 . - . ID=gene-NDY24_08600;Name=NDY24_08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08600 CP098602.1 Protein Homology CDS 1899782 1901374 . - 0 ID=cds-UUE99762.1;Parent=gene-NDY24_08600;Dbxref=NCBI_GP:UUE99762.1;Name=UUE99762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927696.1;locus_tag=NDY24_08600;product=DUF1800 domain-containing protein;protein_id=UUE99762.1;transl_table=11 CP098602.1 Genbank gene 1901498 1902868 . - . ID=gene-NDY24_08605;Name=NDY24_08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08605 CP098602.1 Protein Homology CDS 1901498 1902868 . - 0 ID=cds-UUF00332.1;Parent=gene-NDY24_08605;Dbxref=NCBI_GP:UUF00332.1;Name=UUF00332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171995.1;locus_tag=NDY24_08605;product=ATP-binding protein;protein_id=UUF00332.1;transl_table=11 CP098602.1 Genbank gene 1902943 1903626 . - . ID=gene-NDY24_08610;Name=NDY24_08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08610 CP098602.1 Protein Homology CDS 1902943 1903626 . - 0 ID=cds-UUE99763.1;Parent=gene-NDY24_08610;Dbxref=NCBI_GP:UUE99763.1;Name=UUE99763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017917079.1;locus_tag=NDY24_08610;product=response regulator transcription factor;protein_id=UUE99763.1;transl_table=11 CP098602.1 Genbank gene 1903697 1903963 . - . ID=gene-NDY24_08615;Name=NDY24_08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08615 CP098602.1 Protein Homology CDS 1903697 1903963 . - 0 ID=cds-UUE99764.1;Parent=gene-NDY24_08615;Dbxref=NCBI_GP:UUE99764.1;Name=UUE99764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446315.1;locus_tag=NDY24_08615;product=hypothetical protein;protein_id=UUE99764.1;transl_table=11 CP098602.1 Genbank gene 1904338 1905342 . - . ID=gene-NDY24_08620;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=NDY24_08620 CP098602.1 Protein Homology CDS 1904338 1905342 . - 0 ID=cds-UUE99765.1;Parent=gene-NDY24_08620;Dbxref=NCBI_GP:UUE99765.1;Name=UUE99765.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916500.1;locus_tag=NDY24_08620;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=UUE99765.1;transl_table=11 CP098602.1 Genbank gene 1905410 1905658 . + . ID=gene-NDY24_08625;Name=NDY24_08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08625 CP098602.1 GeneMarkS-2+ CDS 1905410 1905658 . + 0 ID=cds-UUE99766.1;Parent=gene-NDY24_08625;Dbxref=NCBI_GP:UUE99766.1;Name=UUE99766.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_08625;product=hypothetical protein;protein_id=UUE99766.1;transl_table=11 CP098602.1 Genbank gene 1905910 1906134 . - . ID=gene-NDY24_08630;Name=NDY24_08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08630 CP098602.1 Protein Homology CDS 1905910 1906134 . - 0 ID=cds-UUE99767.1;Parent=gene-NDY24_08630;Dbxref=NCBI_GP:UUE99767.1;Name=UUE99767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154914.1;locus_tag=NDY24_08630;product=hypothetical protein;protein_id=UUE99767.1;transl_table=11 CP098602.1 Genbank gene 1906892 1907467 . - . ID=gene-NDY24_08635;Name=NDY24_08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08635 CP098602.1 Protein Homology CDS 1906892 1907467 . - 0 ID=cds-UUE99768.1;Parent=gene-NDY24_08635;Dbxref=NCBI_GP:UUE99768.1;Name=UUE99768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374921.1;locus_tag=NDY24_08635;product=ankyrin repeat domain-containing protein;protein_id=UUE99768.1;transl_table=11 CP098602.1 Genbank gene 1907527 1909032 . - . ID=gene-NDY24_08640;Name=katB;gbkey=Gene;gene=katB;gene_biotype=protein_coding;locus_tag=NDY24_08640 CP098602.1 Protein Homology CDS 1907527 1909032 . - 0 ID=cds-UUE99769.1;Parent=gene-NDY24_08640;Dbxref=NCBI_GP:UUE99769.1;Name=UUE99769.1;gbkey=CDS;gene=katB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902786.1;locus_tag=NDY24_08640;product=catalase KatB;protein_id=UUE99769.1;transl_table=11 CP098602.1 Genbank gene 1909303 1911435 . - . ID=gene-NDY24_08645;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=NDY24_08645 CP098602.1 Protein Homology CDS 1909303 1911435 . - 0 ID=cds-UUE99770.1;Parent=gene-NDY24_08645;Dbxref=NCBI_GP:UUE99770.1;Name=UUE99770.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505052.1;locus_tag=NDY24_08645;product=ATP-dependent DNA helicase DinG;protein_id=UUE99770.1;transl_table=11 CP098602.1 Genbank gene 1911553 1911780 . - . ID=gene-NDY24_08650;Name=NDY24_08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08650 CP098602.1 Protein Homology CDS 1911553 1911780 . - 0 ID=cds-UUE99771.1;Parent=gene-NDY24_08650;Dbxref=NCBI_GP:UUE99771.1;Name=UUE99771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452104.1;locus_tag=NDY24_08650;product=hypothetical protein;protein_id=UUE99771.1;transl_table=11 CP098602.1 Genbank gene 1911777 1912139 . - . ID=gene-NDY24_08655;Name=NDY24_08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08655 CP098602.1 Protein Homology CDS 1911777 1912139 . - 0 ID=cds-UUE99772.1;Parent=gene-NDY24_08655;Dbxref=NCBI_GP:UUE99772.1;Name=UUE99772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452105.1;locus_tag=NDY24_08655;product=hypothetical protein;protein_id=UUE99772.1;transl_table=11 CP098602.1 Genbank gene 1912141 1912992 . - . ID=gene-NDY24_08660;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=NDY24_08660 CP098602.1 Protein Homology CDS 1912141 1912992 . - 0 ID=cds-UUE99773.1;Parent=gene-NDY24_08660;Dbxref=NCBI_GP:UUE99773.1;Name=UUE99773.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257342.1;locus_tag=NDY24_08660;product=shikimate dehydrogenase;protein_id=UUE99773.1;transl_table=11 CP098602.1 Genbank gene 1913045 1913926 . + . ID=gene-NDY24_08665;Name=NDY24_08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08665 CP098602.1 Protein Homology CDS 1913045 1913926 . + 0 ID=cds-UUE99774.1;Parent=gene-NDY24_08665;Dbxref=NCBI_GP:UUE99774.1;Name=UUE99774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156261.1;locus_tag=NDY24_08665;product=PD40 domain-containing protein;protein_id=UUE99774.1;transl_table=11 CP098602.1 Genbank gene 1914561 1917080 . - . ID=gene-NDY24_08670;Name=NDY24_08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08670 CP098602.1 Protein Homology CDS 1914561 1917080 . - 0 ID=cds-UUE99775.1;Parent=gene-NDY24_08670;Dbxref=NCBI_GP:UUE99775.1;Name=UUE99775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916508.1;locus_tag=NDY24_08670;product=sulfite reductase flavoprotein subunit alpha;protein_id=UUE99775.1;transl_table=11 CP098602.1 Genbank gene 1917241 1918230 . - . ID=gene-NDY24_08675;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=NDY24_08675 CP098602.1 Protein Homology CDS 1917241 1918230 . - 0 ID=cds-UUE99776.1;Parent=gene-NDY24_08675;Dbxref=NCBI_GP:UUE99776.1;Name=UUE99776.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506206.1;locus_tag=NDY24_08675;product=porphobilinogen synthase;protein_id=UUE99776.1;transl_table=11 CP098602.1 Genbank gene 1918318 1918560 . - . ID=gene-NDY24_08680;Name=NDY24_08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08680 CP098602.1 Protein Homology CDS 1918318 1918560 . - 0 ID=cds-UUF00333.1;Parent=gene-NDY24_08680;Dbxref=NCBI_GP:UUF00333.1;Name=UUF00333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916515.1;locus_tag=NDY24_08680;product=hypothetical protein;protein_id=UUF00333.1;transl_table=11 CP098602.1 Genbank gene 1918763 1919215 . + . ID=gene-NDY24_08685;Name=NDY24_08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08685 CP098602.1 Protein Homology CDS 1918763 1919215 . + 0 ID=cds-UUE99777.1;Parent=gene-NDY24_08685;Dbxref=NCBI_GP:UUE99777.1;Name=UUE99777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379201.1;locus_tag=NDY24_08685;product=hypothetical protein;protein_id=UUE99777.1;transl_table=11 CP098602.1 Genbank gene 1919697 1920362 . + . ID=gene-NDY24_08690;Name=NDY24_08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08690 CP098602.1 Protein Homology CDS 1919697 1920362 . + 0 ID=cds-UUF00334.1;Parent=gene-NDY24_08690;Dbxref=NCBI_GP:UUF00334.1;Name=UUF00334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489854.1;locus_tag=NDY24_08690;product=hypothetical protein;protein_id=UUF00334.1;transl_table=11 CP098602.1 Genbank gene 1920423 1921571 . + . ID=gene-NDY24_08695;Name=NDY24_08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08695 CP098602.1 Protein Homology CDS 1920423 1921571 . + 0 ID=cds-UUE99778.1;Parent=gene-NDY24_08695;Dbxref=NCBI_GP:UUE99778.1;Name=UUE99778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016848926.1;locus_tag=NDY24_08695;product=type IV secretion system protein;protein_id=UUE99778.1;transl_table=11 CP098602.1 Genbank gene 1921821 1922297 . + . ID=gene-NDY24_08700;Name=NDY24_08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08700 CP098602.1 Protein Homology CDS 1921821 1922297 . + 0 ID=cds-UUE99779.1;Parent=gene-NDY24_08700;Dbxref=NCBI_GP:UUE99779.1;Name=UUE99779.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025197.2;locus_tag=NDY24_08700;product=DUF4189 domain-containing protein;protein_id=UUE99779.1;transl_table=11 CP098602.1 Genbank pseudogene 1922410 1922943 . + . ID=gene-NDY24_08705;Name=NDY24_08705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_08705;pseudo=true CP098602.1 Protein Homology CDS 1922410 1922943 . + 0 ID=cds-NDY24_08705;Parent=gene-NDY24_08705;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472001.1;locus_tag=NDY24_08705;product=type IV secretion system protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1923002 1923520 . + . ID=gene-NDY24_08710;Name=NDY24_08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08710 CP098602.1 Protein Homology CDS 1923002 1923520 . + 0 ID=cds-UUE99780.1;Parent=gene-NDY24_08710;Dbxref=NCBI_GP:UUE99780.1;Name=UUE99780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438514.1;locus_tag=NDY24_08710;product=DUF4189 domain-containing protein;protein_id=UUE99780.1;transl_table=11 CP098602.1 Genbank gene 1923681 1924196 . + . ID=gene-NDY24_08715;Name=NDY24_08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08715 CP098602.1 GeneMarkS-2+ CDS 1923681 1924196 . + 0 ID=cds-UUE99781.1;Parent=gene-NDY24_08715;Dbxref=NCBI_GP:UUE99781.1;Name=UUE99781.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_08715;product=hypothetical protein;protein_id=UUE99781.1;transl_table=11 CP098602.1 Genbank gene 1924239 1925468 . + . ID=gene-NDY24_08720;Name=NDY24_08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08720 CP098602.1 Protein Homology CDS 1924239 1925468 . + 0 ID=cds-UUF00335.1;Parent=gene-NDY24_08720;Dbxref=NCBI_GP:UUF00335.1;Name=UUF00335.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021508.2;locus_tag=NDY24_08720;product=DUF2235 domain-containing protein;protein_id=UUF00335.1;transl_table=11 CP098602.1 Genbank pseudogene 1925438 1926588 . - . ID=gene-NDY24_08725;Name=NDY24_08725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_08725;pseudo=true CP098602.1 Protein Homology CDS 1925438 1926588 . - 0 ID=cds-NDY24_08725;Parent=gene-NDY24_08725;Note=programmed frameshift%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558178.1;locus_tag=NDY24_08725;product=transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1926559 1927047 . + . ID=gene-NDY24_08730;Name=NDY24_08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08730 CP098602.1 Protein Homology CDS 1926559 1927047 . + 0 ID=cds-UUF00336.1;Parent=gene-NDY24_08730;Dbxref=NCBI_GP:UUF00336.1;Name=UUF00336.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016491.2;locus_tag=NDY24_08730;product=type IV secretion system protein;protein_id=UUF00336.1;transl_table=11 CP098602.1 Genbank gene 1927618 1927854 . + . ID=gene-NDY24_08735;Name=NDY24_08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08735 CP098602.1 Protein Homology CDS 1927618 1927854 . + 0 ID=cds-UUE99782.1;Parent=gene-NDY24_08735;Dbxref=NCBI_GP:UUE99782.1;Name=UUE99782.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025197.2;locus_tag=NDY24_08735;product=DUF4189 domain-containing protein;protein_id=UUE99782.1;transl_table=11 CP098602.1 Genbank gene 1928115 1928630 . + . ID=gene-NDY24_08740;Name=NDY24_08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08740 CP098602.1 GeneMarkS-2+ CDS 1928115 1928630 . + 0 ID=cds-UUE99783.1;Parent=gene-NDY24_08740;Dbxref=NCBI_GP:UUE99783.1;Name=UUE99783.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_08740;product=hypothetical protein;protein_id=UUE99783.1;transl_table=11 CP098602.1 Genbank pseudogene 1928748 1929712 . - . ID=gene-NDY24_08745;Name=NDY24_08745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_08745;pseudo=true CP098602.1 Protein Homology CDS 1928748 1929712 . - 0 ID=cds-NDY24_08745;Parent=gene-NDY24_08745;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037261.1;locus_tag=NDY24_08745;product=IS1595 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1929864 1931228 . + . ID=gene-NDY24_08750;Name=NDY24_08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08750 CP098602.1 Protein Homology CDS 1929864 1931228 . + 0 ID=cds-UUE99784.1;Parent=gene-NDY24_08750;Dbxref=NCBI_GP:UUE99784.1;Name=UUE99784.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021508.2;locus_tag=NDY24_08750;product=DUF2235 domain-containing protein;protein_id=UUE99784.1;transl_table=11 CP098602.1 Genbank gene 1931351 1931893 . + . ID=gene-NDY24_08755;Name=NDY24_08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08755 CP098602.1 Protein Homology CDS 1931351 1931893 . + 0 ID=cds-UUE99785.1;Parent=gene-NDY24_08755;Dbxref=NCBI_GP:UUE99785.1;Name=UUE99785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269533.1;locus_tag=NDY24_08755;product=DUF4189 domain-containing protein;protein_id=UUE99785.1;transl_table=11 CP098602.1 Genbank gene 1932171 1933976 . - . ID=gene-NDY24_08760;Name=NDY24_08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08760 CP098602.1 Protein Homology CDS 1932171 1933976 . - 0 ID=cds-UUE99786.1;Parent=gene-NDY24_08760;Dbxref=NCBI_GP:UUE99786.1;Name=UUE99786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158571.1;locus_tag=NDY24_08760;product=DUF885 domain-containing protein;protein_id=UUE99786.1;transl_table=11 CP098602.1 Genbank gene 1934046 1934510 . - . ID=gene-NDY24_08765;Name=NDY24_08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08765 CP098602.1 Protein Homology CDS 1934046 1934510 . - 0 ID=cds-UUE99787.1;Parent=gene-NDY24_08765;Dbxref=NCBI_GP:UUE99787.1;Name=UUE99787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453130.1;locus_tag=NDY24_08765;product=cytochrome c oxidase assembly factor 1 family protein;protein_id=UUE99787.1;transl_table=11 CP098602.1 Genbank gene 1934753 1936981 . - . ID=gene-NDY24_08770;Name=NDY24_08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08770 CP098602.1 Protein Homology CDS 1934753 1936981 . - 0 ID=cds-UUE99788.1;Parent=gene-NDY24_08770;Dbxref=NCBI_GP:UUE99788.1;Name=UUE99788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016944591.1;locus_tag=NDY24_08770;product=S9 family peptidase;protein_id=UUE99788.1;transl_table=11 CP098602.1 Genbank pseudogene 1937312 1938000 . - . ID=gene-NDY24_08775;Name=NDY24_08775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_08775;pseudo=true CP098602.1 Protein Homology CDS 1937312 1938000 . - 0 ID=cds-NDY24_08775;Parent=gene-NDY24_08775;Note=frameshifted;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804208.1;locus_tag=NDY24_08775;product=glutathione S-transferase N-terminal domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1938252 1941266 . + . ID=gene-NDY24_08780;Name=NDY24_08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08780 CP098602.1 Protein Homology CDS 1938252 1941266 . + 0 ID=cds-UUE99789.1;Parent=gene-NDY24_08780;Dbxref=NCBI_GP:UUE99789.1;Name=UUE99789.1;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158727.1;locus_tag=NDY24_08780;product=TonB-dependent receptor;protein_id=UUE99789.1;transl_table=11 CP098602.1 Genbank gene 1941445 1942146 . + . ID=gene-NDY24_08785;Name=NDY24_08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08785 CP098602.1 Protein Homology CDS 1941445 1942146 . + 0 ID=cds-UUE99790.1;Parent=gene-NDY24_08785;Dbxref=NCBI_GP:UUE99790.1;Name=UUE99790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453126.1;locus_tag=NDY24_08785;product=SapC family protein;protein_id=UUE99790.1;transl_table=11 CP098602.1 Genbank gene 1942136 1943149 . + . ID=gene-NDY24_08790;Name=NDY24_08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08790 CP098602.1 Protein Homology CDS 1942136 1943149 . + 0 ID=cds-UUE99791.1;Parent=gene-NDY24_08790;Dbxref=NCBI_GP:UUE99791.1;Name=UUE99791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156274.1;locus_tag=NDY24_08790;product=cupin-like domain-containing protein;protein_id=UUE99791.1;transl_table=11 CP098602.1 Genbank gene 1943162 1944727 . + . ID=gene-NDY24_08795;Name=NDY24_08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08795 CP098602.1 Protein Homology CDS 1943162 1944727 . + 0 ID=cds-UUE99792.1;Parent=gene-NDY24_08795;Dbxref=NCBI_GP:UUE99792.1;Name=UUE99792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453124.1;locus_tag=NDY24_08795;product=tryptophan 7-halogenase;protein_id=UUE99792.1;transl_table=11 CP098602.1 Genbank pseudogene 1944868 1945892 . + . ID=gene-NDY24_08800;Name=NDY24_08800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_08800;pseudo=true CP098602.1 Protein Homology CDS 1944868 1945892 . + 0 ID=cds-NDY24_08800;Parent=gene-NDY24_08800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117467.1;locus_tag=NDY24_08800;product=energy transducer TonB;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1946434 1947627 . - . ID=gene-NDY24_08805;Name=NDY24_08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08805 CP098602.1 Protein Homology CDS 1946434 1947627 . - 0 ID=cds-UUE99793.1;Parent=gene-NDY24_08805;Dbxref=NCBI_GP:UUE99793.1;Name=UUE99793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017168416.1;locus_tag=NDY24_08805;product=ABC transporter permease;protein_id=UUE99793.1;transl_table=11 CP098602.1 Genbank gene 1947624 1948370 . - . ID=gene-NDY24_08810;Name=NDY24_08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08810 CP098602.1 Protein Homology CDS 1947624 1948370 . - 0 ID=cds-UUE99794.1;Parent=gene-NDY24_08810;Dbxref=NCBI_GP:UUE99794.1;Name=UUE99794.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011039041.1;locus_tag=NDY24_08810;product=ATP-binding cassette domain-containing protein;protein_id=UUE99794.1;transl_table=11 CP098602.1 Genbank gene 1948402 1949994 . - . ID=gene-NDY24_08815;Name=NDY24_08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08815 CP098602.1 Protein Homology CDS 1948402 1949994 . - 0 ID=cds-UUE99795.1;Parent=gene-NDY24_08815;Dbxref=NCBI_GP:UUE99795.1;Name=UUE99795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849961.1;locus_tag=NDY24_08815;product=alpha/beta hydrolase;protein_id=UUE99795.1;transl_table=11 CP098602.1 Genbank gene 1950055 1950255 . - . ID=gene-NDY24_08820;Name=NDY24_08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08820 CP098602.1 Protein Homology CDS 1950055 1950255 . - 0 ID=cds-UUE99796.1;Parent=gene-NDY24_08820;Dbxref=NCBI_GP:UUE99796.1;Name=UUE99796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903655.1;locus_tag=NDY24_08820;product=helix-turn-helix transcriptional regulator;protein_id=UUE99796.1;transl_table=11 CP098602.1 Genbank gene 1950252 1950839 . - . ID=gene-NDY24_08825;Name=NDY24_08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08825 CP098602.1 Protein Homology CDS 1950252 1950839 . - 0 ID=cds-UUE99797.1;Parent=gene-NDY24_08825;Dbxref=NCBI_GP:UUE99797.1;Name=UUE99797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156281.1;locus_tag=NDY24_08825;product=hypothetical protein;protein_id=UUE99797.1;transl_table=11 CP098602.1 Genbank gene 1951170 1952741 . + . ID=gene-NDY24_08830;Name=NDY24_08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08830 CP098602.1 Protein Homology CDS 1951170 1952741 . + 0 ID=cds-UUE99798.1;Parent=gene-NDY24_08830;Dbxref=NCBI_GP:UUE99798.1;Name=UUE99798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849963.1;locus_tag=NDY24_08830;product=beta-xylosidase;protein_id=UUE99798.1;transl_table=11 CP098602.1 Genbank gene 1952805 1953077 . - . ID=gene-NDY24_08835;Name=NDY24_08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08835 CP098602.1 Protein Homology CDS 1952805 1953077 . - 0 ID=cds-UUE99799.1;Parent=gene-NDY24_08835;Dbxref=NCBI_GP:UUE99799.1;Name=UUE99799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487297.1;locus_tag=NDY24_08835;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=UUE99799.1;transl_table=11 CP098602.1 Genbank pseudogene 1953143 1954123 . + . ID=gene-NDY24_08840;Name=dmeF;gbkey=Gene;gene=dmeF;gene_biotype=pseudogene;locus_tag=NDY24_08840;pseudo=true CP098602.1 Protein Homology CDS 1953143 1954123 . + 0 ID=cds-NDY24_08840;Parent=gene-NDY24_08840;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016021;gbkey=CDS;gene=dmeF;go_component=integral component of membrane|0016021||IEA;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112280.1;locus_tag=NDY24_08840;product=CDF family Co(II)/Ni(II) efflux transporter DmeF;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1954387 1955214 . - . ID=gene-NDY24_08845;Name=NDY24_08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08845 CP098602.1 Protein Homology CDS 1954387 1955214 . - 0 ID=cds-UUE99800.1;Parent=gene-NDY24_08845;Dbxref=NCBI_GP:UUE99800.1;Name=UUE99800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091363.1;locus_tag=NDY24_08845;product=ferredoxin--NADP reductase;protein_id=UUE99800.1;transl_table=11 CP098602.1 Genbank gene 1955250 1956278 . + . ID=gene-NDY24_08850;Name=NDY24_08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08850 CP098602.1 Protein Homology CDS 1955250 1956278 . + 0 ID=cds-UUE99801.1;Parent=gene-NDY24_08850;Dbxref=NCBI_GP:UUE99801.1;Name=UUE99801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450847.1;locus_tag=NDY24_08850;product=ABC transporter ATP-binding protein;protein_id=UUE99801.1;transl_table=11 CP098602.1 Genbank gene 1956275 1957078 . + . ID=gene-NDY24_08855;Name=NDY24_08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08855 CP098602.1 Protein Homology CDS 1956275 1957078 . + 0 ID=cds-UUE99802.1;Parent=gene-NDY24_08855;Dbxref=NCBI_GP:UUE99802.1;Name=UUE99802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903649.1;locus_tag=NDY24_08855;product=ABC transporter permease;protein_id=UUE99802.1;transl_table=11 CP098602.1 Genbank gene 1957080 1957418 . + . ID=gene-NDY24_08860;Name=NDY24_08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08860 CP098602.1 GeneMarkS-2+ CDS 1957080 1957418 . + 0 ID=cds-UUE99803.1;Parent=gene-NDY24_08860;Dbxref=NCBI_GP:UUE99803.1;Name=UUE99803.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_08860;product=hypothetical protein;protein_id=UUE99803.1;transl_table=11 CP098602.1 Genbank pseudogene 1957405 1958211 . + . ID=gene-NDY24_08865;Name=NDY24_08865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_08865;pseudo=true CP098602.1 Protein Homology CDS 1957405 1958211 . + 0 ID=cds-NDY24_08865;Parent=gene-NDY24_08865;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002801519.1;locus_tag=NDY24_08865;product=IS5 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1958628 1959572 . + . ID=gene-NDY24_08870;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=NDY24_08870 CP098602.1 Protein Homology CDS 1958628 1959572 . + 0 ID=cds-UUF00337.1;Parent=gene-NDY24_08870;Dbxref=NCBI_GP:UUF00337.1;Name=UUF00337.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005989852.1;locus_tag=NDY24_08870;product=2-dehydropantoate 2-reductase;protein_id=UUF00337.1;transl_table=11 CP098602.1 Genbank gene 1959815 1960330 . + . ID=gene-NDY24_08875;Name=NDY24_08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08875 CP098602.1 Protein Homology CDS 1959815 1960330 . + 0 ID=cds-UUF00338.1;Parent=gene-NDY24_08875;Dbxref=NCBI_GP:UUF00338.1;Name=UUF00338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487308.1;locus_tag=NDY24_08875;product=hypothetical protein;protein_id=UUF00338.1;transl_table=11 CP098602.1 Genbank gene 1960397 1960472 . - . ID=gene-NDY24_08880;Name=NDY24_08880;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_08880 CP098602.1 cmsearch ncRNA 1960397 1960472 . - . ID=rna-NDY24_08880;Parent=gene-NDY24_08880;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_08880;product=sX9 sRNA CP098602.1 cmsearch exon 1960397 1960472 . - . ID=exon-NDY24_08880-1;Parent=rna-NDY24_08880;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_08880;product=sX9 sRNA CP098602.1 Genbank gene 1960538 1961236 . - . ID=gene-NDY24_08885;Name=NDY24_08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08885 CP098602.1 Protein Homology CDS 1960538 1961236 . - 0 ID=cds-UUE99804.1;Parent=gene-NDY24_08885;Dbxref=NCBI_GP:UUE99804.1;Name=UUE99804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506180.1;locus_tag=NDY24_08885;product=hypothetical protein;protein_id=UUE99804.1;transl_table=11 CP098602.1 Genbank gene 1961305 1961712 . - . ID=gene-NDY24_08890;Name=NDY24_08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08890 CP098602.1 Protein Homology CDS 1961305 1961712 . - 0 ID=cds-UUE99805.1;Parent=gene-NDY24_08890;Dbxref=NCBI_GP:UUE99805.1;Name=UUE99805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452020.1;locus_tag=NDY24_08890;product=acyl-CoA thioesterase;protein_id=UUE99805.1;transl_table=11 CP098602.1 Genbank gene 1962089 1962415 . - . ID=gene-NDY24_08895;Name=NDY24_08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08895 CP098602.1 Protein Homology CDS 1962089 1962415 . - 0 ID=cds-UUE99806.1;Parent=gene-NDY24_08895;Dbxref=NCBI_GP:UUE99806.1;Name=UUE99806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156291.1;locus_tag=NDY24_08895;product=thioredoxin family protein;protein_id=UUE99806.1;transl_table=11 CP098602.1 Genbank gene 1962387 1962788 . - . ID=gene-NDY24_08900;Name=NDY24_08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08900 CP098602.1 Protein Homology CDS 1962387 1962788 . - 0 ID=cds-UUE99807.1;Parent=gene-NDY24_08900;Dbxref=NCBI_GP:UUE99807.1;Name=UUE99807.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF006747.0;locus_tag=NDY24_08900;product=flavodoxin;protein_id=UUE99807.1;transl_table=11 CP098602.1 Genbank gene 1963107 1963577 . - . ID=gene-NDY24_08905;Name=NDY24_08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08905 CP098602.1 Protein Homology CDS 1963107 1963577 . - 0 ID=cds-UUE99808.1;Parent=gene-NDY24_08905;Dbxref=NCBI_GP:UUE99808.1;Name=UUE99808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369832.1;locus_tag=NDY24_08905;product=hypothetical protein;protein_id=UUE99808.1;transl_table=11 CP098602.1 Genbank gene 1963813 1964199 . - . ID=gene-NDY24_08910;Name=NDY24_08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08910 CP098602.1 GeneMarkS-2+ CDS 1963813 1964199 . - 0 ID=cds-UUE99809.1;Parent=gene-NDY24_08910;Dbxref=NCBI_GP:UUE99809.1;Name=UUE99809.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_08910;product=hypothetical protein;protein_id=UUE99809.1;transl_table=11 CP098602.1 Genbank gene 1964316 1965344 . - . ID=gene-NDY24_08915;Name=NDY24_08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08915 CP098602.1 Protein Homology CDS 1964316 1965344 . - 0 ID=cds-UUE99810.1;Parent=gene-NDY24_08915;Dbxref=NCBI_GP:UUE99810.1;Name=UUE99810.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003469253.1;locus_tag=NDY24_08915;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=UUE99810.1;transl_table=11 CP098602.1 Genbank pseudogene 1965535 1968034 . - . ID=gene-NDY24_08920;Name=NDY24_08920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_08920;pseudo=true CP098602.1 Protein Homology CDS 1965535 1968034 . - 0 ID=cds-NDY24_08920;Parent=gene-NDY24_08920;Note=frameshifted%3B internal stop;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501652.1;locus_tag=NDY24_08920;product=ribonucleoside-diphosphate reductase subunit alpha;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1968476 1969516 . - . ID=gene-NDY24_08925;Name=NDY24_08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08925 CP098602.1 Protein Homology CDS 1968476 1969516 . - 0 ID=cds-UUE99811.1;Parent=gene-NDY24_08925;Dbxref=NCBI_GP:UUE99811.1;Name=UUE99811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487316.1;locus_tag=NDY24_08925;product=DUF475 domain-containing protein;protein_id=UUE99811.1;transl_table=11 CP098602.1 Genbank gene 1969623 1972331 . - . ID=gene-NDY24_08930;Name=NDY24_08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08930 CP098602.1 Protein Homology CDS 1969623 1972331 . - 0 ID=cds-UUF00339.1;Parent=gene-NDY24_08930;Dbxref=NCBI_GP:UUF00339.1;Name=UUF00339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506173.1;locus_tag=NDY24_08930;product=bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase;protein_id=UUF00339.1;transl_table=11 CP098602.1 Genbank gene 1972533 1973318 . + . ID=gene-NDY24_08935;Name=NDY24_08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08935 CP098602.1 Protein Homology CDS 1972533 1973318 . + 0 ID=cds-UUE99812.1;Parent=gene-NDY24_08935;Dbxref=NCBI_GP:UUE99812.1;Name=UUE99812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449435.1;locus_tag=NDY24_08935;product=DUF4198 domain-containing protein;protein_id=UUE99812.1;transl_table=11 CP098602.1 Genbank gene 1973460 1974371 . + . ID=gene-NDY24_08940;Name=NDY24_08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08940 CP098602.1 Protein Homology CDS 1973460 1974371 . + 0 ID=cds-UUE99813.1;Parent=gene-NDY24_08940;Dbxref=NCBI_GP:UUE99813.1;Name=UUE99813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449436.1;locus_tag=NDY24_08940;product=EF-hand domain-containing protein;protein_id=UUE99813.1;transl_table=11 CP098602.1 Genbank gene 1974515 1976854 . + . ID=gene-NDY24_08945;Name=NDY24_08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08945 CP098602.1 Protein Homology CDS 1974515 1976854 . + 0 ID=cds-UUE99814.1;Parent=gene-NDY24_08945;Dbxref=NCBI_GP:UUE99814.1;Name=UUE99814.1;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904364.1;locus_tag=NDY24_08945;product=TonB-dependent hemoglobin/transferrin/lactoferrin family receptor;protein_id=UUE99814.1;transl_table=11 CP098602.1 Genbank gene 1976945 1978312 . - . ID=gene-NDY24_08950;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=NDY24_08950 CP098602.1 Protein Homology CDS 1976945 1978312 . - 0 ID=cds-UUE99815.1;Parent=gene-NDY24_08950;Dbxref=NCBI_GP:UUE99815.1;Name=UUE99815.1;Ontology_term=GO:0015693,GO:0015095;gbkey=CDS;gene=mgtE;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174334.1;locus_tag=NDY24_08950;product=magnesium transporter;protein_id=UUE99815.1;transl_table=11 CP098602.1 Genbank gene 1978614 1980425 . + . ID=gene-NDY24_08955;Name=NDY24_08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08955 CP098602.1 Protein Homology CDS 1978614 1980425 . + 0 ID=cds-UUE99816.1;Parent=gene-NDY24_08955;Dbxref=NCBI_GP:UUE99816.1;Name=UUE99816.1;Ontology_term=GO:0006812,GO:1902600,GO:0005451,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=monovalent cation:proton antiporter activity|0005451||IEA;go_process=cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369808.1;locus_tag=NDY24_08955;product=monovalent cation:proton antiporter-2 (CPA2) family protein;protein_id=UUE99816.1;transl_table=11 CP098602.1 Genbank gene 1980561 1982387 . - . ID=gene-NDY24_08960;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=NDY24_08960 CP098602.1 Protein Homology CDS 1980561 1982387 . - 0 ID=cds-UUE99817.1;Parent=gene-NDY24_08960;Dbxref=NCBI_GP:UUE99817.1;Name=UUE99817.1;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381463.1;locus_tag=NDY24_08960;product=glucose-6-phosphate dehydrogenase;protein_id=UUE99817.1;transl_table=11 CP098602.1 Genbank gene 1982384 1984183 . - . ID=gene-NDY24_08965;Name=NDY24_08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08965 CP098602.1 Protein Homology CDS 1982384 1984183 . - 0 ID=cds-UUE99818.1;Parent=gene-NDY24_08965;Dbxref=NCBI_GP:UUE99818.1;Name=UUE99818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158573.1;locus_tag=NDY24_08965;product=glycoside hydrolase family 15 protein;protein_id=UUE99818.1;transl_table=11 CP098602.1 Genbank gene 1984717 1988037 . - . ID=gene-NDY24_08970;Name=NDY24_08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08970 CP098602.1 Protein Homology CDS 1984717 1988037 . - 0 ID=cds-UUE99819.1;Parent=gene-NDY24_08970;Dbxref=NCBI_GP:UUE99819.1;Name=UUE99819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015471441.1;locus_tag=NDY24_08970;product=ankyrin repeat domain-containing protein;protein_id=UUE99819.1;transl_table=11 CP098602.1 Genbank gene 1988030 1988290 . - . ID=gene-NDY24_08975;Name=NDY24_08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08975 CP098602.1 Protein Homology CDS 1988030 1988290 . - 0 ID=cds-UUE99820.1;Parent=gene-NDY24_08975;Dbxref=NCBI_GP:UUE99820.1;Name=UUE99820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156303.1;locus_tag=NDY24_08975;product=YcgL domain-containing protein;protein_id=UUE99820.1;transl_table=11 CP098602.1 Genbank gene 1988509 1989705 . + . ID=gene-NDY24_08980;Name=NDY24_08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08980 CP098602.1 Protein Homology CDS 1988509 1989705 . + 0 ID=cds-UUE99821.1;Parent=gene-NDY24_08980;Dbxref=NCBI_GP:UUE99821.1;Name=UUE99821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117713.1;locus_tag=NDY24_08980;product=beta-ketoacyl-[acyl-carrier-protein] synthase family protein;protein_id=UUE99821.1;transl_table=11 CP098602.1 Genbank gene 1989705 1990478 . + . ID=gene-NDY24_08985;Name=NDY24_08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08985 CP098602.1 Protein Homology CDS 1989705 1990478 . + 0 ID=cds-UUE99822.1;Parent=gene-NDY24_08985;Dbxref=NCBI_GP:UUE99822.1;Name=UUE99822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302406.1;locus_tag=NDY24_08985;product=beta-ketoacyl synthase chain length factor;protein_id=UUE99822.1;transl_table=11 CP098602.1 Genbank gene 1990475 1991296 . + . ID=gene-NDY24_08990;Name=NDY24_08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_08990 CP098602.1 Protein Homology CDS 1990475 1991296 . + 0 ID=cds-UUE99823.1;Parent=gene-NDY24_08990;Dbxref=NCBI_GP:UUE99823.1;Name=UUE99823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369782.1;locus_tag=NDY24_08990;product=glycosyltransferase family 2 protein;protein_id=UUE99823.1;transl_table=11 CP098602.1 Genbank pseudogene 1991293 1992915 . + . ID=gene-NDY24_08995;Name=NDY24_08995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_08995;pseudo=true CP098602.1 Protein Homology CDS 1991293 1992915 . + 0 ID=cds-NDY24_08995;Parent=gene-NDY24_08995;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972221.1;locus_tag=NDY24_08995;product=NAD(P)/FAD-dependent oxidoreductase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 1993642 1994367 . - . ID=gene-NDY24_09000;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=NDY24_09000 CP098602.1 Protein Homology CDS 1993642 1994367 . - 0 ID=cds-UUF00340.1;Parent=gene-NDY24_09000;Dbxref=NCBI_GP:UUF00340.1;Name=UUF00340.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fabG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506159.1;locus_tag=NDY24_09000;product=3-oxoacyl-ACP reductase FabG;protein_id=UUF00340.1;transl_table=11 CP098602.1 Genbank gene 1994550 1994942 . - . ID=gene-NDY24_09005;Name=NDY24_09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09005 CP098602.1 Protein Homology CDS 1994550 1994942 . - 0 ID=cds-UUF00341.1;Parent=gene-NDY24_09005;Dbxref=NCBI_GP:UUF00341.1;Name=UUF00341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451928.1;locus_tag=NDY24_09005;product=phosphotransferase;protein_id=UUF00341.1;transl_table=11 CP098602.1 Genbank gene 1994978 1997344 . - . ID=gene-NDY24_09010;Name=NDY24_09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09010 CP098602.1 Protein Homology CDS 1994978 1997344 . - 0 ID=cds-UUE99824.1;Parent=gene-NDY24_09010;Dbxref=NCBI_GP:UUE99824.1;Name=UUE99824.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005926484.1;locus_tag=NDY24_09010;product=MMPL family transporter;protein_id=UUE99824.1;transl_table=11 CP098602.1 Genbank gene 1997590 1998210 . - . ID=gene-NDY24_09015;Name=NDY24_09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09015 CP098602.1 Protein Homology CDS 1997590 1998210 . - 0 ID=cds-UUE99825.1;Parent=gene-NDY24_09015;Dbxref=NCBI_GP:UUE99825.1;Name=UUE99825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994991.1;locus_tag=NDY24_09015;product=fatty acyl CoA synthetase;protein_id=UUE99825.1;transl_table=11 CP098602.1 Genbank gene 1998161 1999135 . - . ID=gene-NDY24_09020;Name=NDY24_09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09020 CP098602.1 Protein Homology CDS 1998161 1999135 . - 0 ID=cds-UUE99826.1;Parent=gene-NDY24_09020;Dbxref=NCBI_GP:UUE99826.1;Name=UUE99826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260623.1;locus_tag=NDY24_09020;product=acyltransferase;protein_id=UUE99826.1;transl_table=11 CP098602.1 Genbank gene 1999132 1999359 . - . ID=gene-NDY24_09025;Name=NDY24_09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09025 CP098602.1 Protein Homology CDS 1999132 1999359 . - 0 ID=cds-UUE99827.1;Parent=gene-NDY24_09025;Dbxref=NCBI_GP:UUE99827.1;Name=UUE99827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914787.1;locus_tag=NDY24_09025;product=hypothetical protein;protein_id=UUE99827.1;transl_table=11 CP098602.1 Genbank gene 1999431 2000180 . - . ID=gene-NDY24_09030;Name=NDY24_09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09030 CP098602.1 Protein Homology CDS 1999431 2000180 . - 0 ID=cds-UUE99828.1;Parent=gene-NDY24_09030;Dbxref=NCBI_GP:UUE99828.1;Name=UUE99828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348972.1;locus_tag=NDY24_09030;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=UUE99828.1;transl_table=11 CP098602.1 Genbank gene 2000234 2000917 . - . ID=gene-NDY24_09035;Name=NDY24_09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09035 CP098602.1 Protein Homology CDS 2000234 2000917 . - 0 ID=cds-UUF00342.1;Parent=gene-NDY24_09035;Dbxref=NCBI_GP:UUF00342.1;Name=UUF00342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443853.1;locus_tag=NDY24_09035;product=ketosynthase;protein_id=UUF00342.1;transl_table=11 CP098602.1 Genbank gene 2000955 2001224 . - . ID=gene-NDY24_09040;Name=xanC;gbkey=Gene;gene=xanC;gene_biotype=protein_coding;locus_tag=NDY24_09040 CP098602.1 Protein Homology CDS 2000955 2001224 . - 0 ID=cds-UUE99829.1;Parent=gene-NDY24_09040;Dbxref=NCBI_GP:UUE99829.1;Name=UUE99829.1;gbkey=CDS;gene=xanC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300738.1;locus_tag=NDY24_09040;product=xanthomonadin biosynthesis acyl carrier protein XanC;protein_id=UUE99829.1;transl_table=11 CP098602.1 Genbank gene 2001563 2002909 . + . ID=gene-NDY24_09045;Name=NDY24_09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09045 CP098602.1 Protein Homology CDS 2001563 2002909 . + 0 ID=cds-UUF00343.1;Parent=gene-NDY24_09045;Dbxref=NCBI_GP:UUF00343.1;Name=UUF00343.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117708.1;locus_tag=NDY24_09045;product=FAD-dependent oxidoreductase;protein_id=UUF00343.1;transl_table=11 CP098602.1 Genbank gene 2002906 2003913 . + . ID=gene-NDY24_09050;Name=NDY24_09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09050 CP098602.1 Protein Homology CDS 2002906 2003913 . + 0 ID=cds-UUE99830.1;Parent=gene-NDY24_09050;Dbxref=NCBI_GP:UUE99830.1;Name=UUE99830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487396.1;locus_tag=NDY24_09050;product=pteridine-dependent deoxygenase;protein_id=UUE99830.1;transl_table=11 CP098602.1 Genbank gene 2003915 2004928 . - . ID=gene-NDY24_09055;Name=NDY24_09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09055 CP098602.1 GeneMarkS-2+ CDS 2003915 2004928 . - 0 ID=cds-UUE99831.1;Parent=gene-NDY24_09055;Dbxref=NCBI_GP:UUE99831.1;Name=UUE99831.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_09055;product=hypothetical protein;protein_id=UUE99831.1;transl_table=11 CP098602.1 Genbank gene 2004964 2006307 . - . ID=gene-NDY24_09060;Name=NDY24_09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09060 CP098602.1 Protein Homology CDS 2004964 2006307 . - 0 ID=cds-UUE99832.1;Parent=gene-NDY24_09060;Dbxref=NCBI_GP:UUE99832.1;Name=UUE99832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156318.1;locus_tag=NDY24_09060;product=AMP-binding protein;protein_id=UUE99832.1;transl_table=11 CP098602.1 Genbank pseudogene 2006715 2009063 . + . ID=gene-NDY24_09065;Name=NDY24_09065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_09065;pseudo=true CP098602.1 Protein Homology CDS 2006715 2009063 . + 0 ID=cds-NDY24_09065;Parent=gene-NDY24_09065;Note=internal stop;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809629.1;locus_tag=NDY24_09065;product=prolyl oligopeptidase family serine peptidase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2009375 2010091 . + . ID=gene-NDY24_09070;Name=NDY24_09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09070 CP098602.1 Protein Homology CDS 2009375 2010091 . + 0 ID=cds-UUE99833.1;Parent=gene-NDY24_09070;Dbxref=NCBI_GP:UUE99833.1;Name=UUE99833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162653.1;locus_tag=NDY24_09070;product=hypothetical protein;protein_id=UUE99833.1;transl_table=11 CP098602.1 Genbank gene 2010088 2010663 . + . ID=gene-NDY24_09075;Name=NDY24_09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09075 CP098602.1 Protein Homology CDS 2010088 2010663 . + 0 ID=cds-UUE99834.1;Parent=gene-NDY24_09075;Dbxref=NCBI_GP:UUE99834.1;Name=UUE99834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091392.1;locus_tag=NDY24_09075;product=hypothetical protein;protein_id=UUE99834.1;transl_table=11 CP098602.1 Genbank gene 2011329 2012228 . + . ID=gene-NDY24_09080;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=NDY24_09080 CP098602.1 Protein Homology CDS 2011329 2012228 . + 0 ID=cds-UUE99835.1;Parent=gene-NDY24_09080;Dbxref=NCBI_GP:UUE99835.1;Name=UUE99835.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967076.1;locus_tag=NDY24_09080;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=UUE99835.1;transl_table=11 CP098602.1 Genbank gene 2012654 2015455 . - . ID=gene-NDY24_09085;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=NDY24_09085 CP098602.1 Protein Homology CDS 2012654 2015455 . - 0 ID=cds-UUE99836.1;Parent=gene-NDY24_09085;Dbxref=NCBI_GP:UUE99836.1;Name=UUE99836.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159421.1;locus_tag=NDY24_09085;product=DNA polymerase I;protein_id=UUE99836.1;transl_table=11 CP098602.1 Genbank gene 2015533 2015814 . + . ID=gene-NDY24_09090;Name=NDY24_09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09090 CP098602.1 Protein Homology CDS 2015533 2015814 . + 0 ID=cds-UUF00344.1;Parent=gene-NDY24_09090;Dbxref=NCBI_GP:UUF00344.1;Name=UUF00344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914773.1;locus_tag=NDY24_09090;product=DUF2782 domain-containing protein;protein_id=UUF00344.1;transl_table=11 CP098602.1 Genbank gene 2015896 2018424 . - . ID=gene-NDY24_09095;Name=NDY24_09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09095 CP098602.1 Protein Homology CDS 2015896 2018424 . - 0 ID=cds-UUE99837.1;Parent=gene-NDY24_09095;Dbxref=NCBI_GP:UUE99837.1;Name=UUE99837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172563.1;locus_tag=NDY24_09095;product=serine/threonine-protein kinase;protein_id=UUE99837.1;transl_table=11 CP098602.1 Genbank gene 2018403 2018942 . - . ID=gene-NDY24_09100;Name=NDY24_09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09100 CP098602.1 Protein Homology CDS 2018403 2018942 . - 0 ID=cds-UUE99838.1;Parent=gene-NDY24_09100;Dbxref=NCBI_GP:UUE99838.1;Name=UUE99838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967112.1;locus_tag=NDY24_09100;product=ECF-type sigma factor;protein_id=UUE99838.1;transl_table=11 CP098602.1 Genbank gene 2019076 2019498 . - . ID=gene-NDY24_09105;Name=NDY24_09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09105 CP098602.1 Protein Homology CDS 2019076 2019498 . - 0 ID=cds-UUE99839.1;Parent=gene-NDY24_09105;Dbxref=NCBI_GP:UUE99839.1;Name=UUE99839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809469.1;locus_tag=NDY24_09105;product=DUF2147 domain-containing protein;protein_id=UUE99839.1;transl_table=11 CP098602.1 Genbank gene 2019916 2021397 . + . ID=gene-NDY24_09110;Name=NDY24_09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09110 CP098602.1 Protein Homology CDS 2019916 2021397 . + 0 ID=cds-UUE99840.1;Parent=gene-NDY24_09110;Dbxref=NCBI_GP:UUE99840.1;Name=UUE99840.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012371.2;locus_tag=NDY24_09110;product=beta-lactamase family protein;protein_id=UUE99840.1;transl_table=11 CP098602.1 Genbank gene 2021750 2022175 . - . ID=gene-NDY24_09115;Name=NDY24_09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09115 CP098602.1 GeneMarkS-2+ CDS 2021750 2022175 . - 0 ID=cds-UUE99841.1;Parent=gene-NDY24_09115;Dbxref=NCBI_GP:UUE99841.1;Name=UUE99841.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_09115;product=hypothetical protein;protein_id=UUE99841.1;transl_table=11 CP098602.1 Genbank gene 2022420 2023433 . - . ID=gene-NDY24_09120;Name=NDY24_09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09120 CP098602.1 Protein Homology CDS 2022420 2023433 . - 0 ID=cds-UUE99842.1;Parent=gene-NDY24_09120;Dbxref=NCBI_GP:UUE99842.1;Name=UUE99842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452695.1;locus_tag=NDY24_09120;product=patatin-like phospholipase family protein;protein_id=UUE99842.1;transl_table=11 CP098602.1 Genbank gene 2023667 2023891 . + . ID=gene-NDY24_09125;Name=NDY24_09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09125 CP098602.1 GeneMarkS-2+ CDS 2023667 2023891 . + 0 ID=cds-UUE99843.1;Parent=gene-NDY24_09125;Dbxref=NCBI_GP:UUE99843.1;Name=UUE99843.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_09125;product=hypothetical protein;protein_id=UUE99843.1;transl_table=11 CP098602.1 Genbank gene 2023977 2024636 . + . ID=gene-NDY24_09130;Name=NDY24_09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09130 CP098602.1 Protein Homology CDS 2023977 2024636 . + 0 ID=cds-UUE99844.1;Parent=gene-NDY24_09130;Dbxref=NCBI_GP:UUE99844.1;Name=UUE99844.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160263.1;locus_tag=NDY24_09130;product=helix-turn-helix domain-containing protein;protein_id=UUE99844.1;transl_table=11 CP098602.1 Genbank gene 2024769 2025215 . - . ID=gene-NDY24_09135;Name=NDY24_09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09135 CP098602.1 Protein Homology CDS 2024769 2025215 . - 0 ID=cds-UUE99845.1;Parent=gene-NDY24_09135;Dbxref=NCBI_GP:UUE99845.1;Name=UUE99845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489888.1;locus_tag=NDY24_09135;product=universal stress protein;protein_id=UUE99845.1;transl_table=11 CP098602.1 Genbank gene 2025694 2026230 . - . ID=gene-NDY24_09140;Name=NDY24_09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09140 CP098602.1 GeneMarkS-2+ CDS 2025694 2026230 . - 0 ID=cds-UUE99846.1;Parent=gene-NDY24_09140;Dbxref=NCBI_GP:UUE99846.1;Name=UUE99846.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_09140;product=hypothetical protein;protein_id=UUE99846.1;transl_table=11 CP098602.1 Genbank gene 2026345 2028531 . - . ID=gene-NDY24_09145;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=NDY24_09145 CP098602.1 Protein Homology CDS 2026345 2028531 . - 0 ID=cds-UUE99847.1;Parent=gene-NDY24_09145;Dbxref=NCBI_GP:UUE99847.1;Name=UUE99847.1;Ontology_term=GO:0006268,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809467.1;locus_tag=NDY24_09145;product=DNA helicase II;protein_id=UUE99847.1;transl_table=11 CP098602.1 Genbank gene 2028675 2030066 . - . ID=gene-NDY24_09150;Name=NDY24_09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09150 CP098602.1 Protein Homology CDS 2028675 2030066 . - 0 ID=cds-UUE99848.1;Parent=gene-NDY24_09150;Dbxref=NCBI_GP:UUE99848.1;Name=UUE99848.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157744.1;locus_tag=NDY24_09150;product=FAD-dependent oxidoreductase;protein_id=UUE99848.1;transl_table=11 CP098602.1 Genbank gene 2030148 2031566 . - . ID=gene-NDY24_09155;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=NDY24_09155 CP098602.1 Protein Homology CDS 2030148 2031566 . - 0 ID=cds-UUE99849.1;Parent=gene-NDY24_09155;Dbxref=NCBI_GP:UUE99849.1;Name=UUE99849.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902730.1;locus_tag=NDY24_09155;product=cardiolipin synthase;protein_id=UUE99849.1;transl_table=11 CP098602.1 Genbank gene 2031580 2032890 . - . ID=gene-NDY24_09160;Name=NDY24_09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09160 CP098602.1 Protein Homology CDS 2031580 2032890 . - 0 ID=cds-UUE99850.1;Parent=gene-NDY24_09160;Dbxref=NCBI_GP:UUE99850.1;Name=UUE99850.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452704.1;locus_tag=NDY24_09160;product=LysR family transcriptional regulator;protein_id=UUE99850.1;transl_table=11 CP098602.1 Genbank gene 2032992 2033663 . + . ID=gene-NDY24_09165;Name=NDY24_09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09165 CP098602.1 Protein Homology CDS 2032992 2033663 . + 0 ID=cds-UUE99851.1;Parent=gene-NDY24_09165;Dbxref=NCBI_GP:UUE99851.1;Name=UUE99851.1;Ontology_term=GO:0047443;gbkey=CDS;go_function=4-hydroxy-4-methyl-2-oxoglutarate aldolase activity|0047443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489876.1;locus_tag=NDY24_09165;product=4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase;protein_id=UUE99851.1;transl_table=11 CP098602.1 Genbank gene 2033656 2034711 . + . ID=gene-NDY24_09170;Name=NDY24_09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09170 CP098602.1 Protein Homology CDS 2033656 2034711 . + 0 ID=cds-UUE99852.1;Parent=gene-NDY24_09170;Dbxref=NCBI_GP:UUE99852.1;Name=UUE99852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091428.1;locus_tag=NDY24_09170;product=4-oxalomesaconate tautomerase;protein_id=UUE99852.1;transl_table=11 CP098602.1 Genbank gene 2035078 2036100 . + . ID=gene-NDY24_09175;Name=NDY24_09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09175 CP098602.1 Protein Homology CDS 2035078 2036100 . + 0 ID=cds-UUE99853.1;Parent=gene-NDY24_09175;Dbxref=NCBI_GP:UUE99853.1;Name=UUE99853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572519.1;locus_tag=NDY24_09175;product=amidohydrolase;protein_id=UUE99853.1;transl_table=11 CP098602.1 Genbank gene 2036375 2036542 . - . ID=gene-NDY24_09180;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=NDY24_09180 CP098602.1 Protein Homology CDS 2036375 2036542 . - 0 ID=cds-UUE99854.1;Parent=gene-NDY24_09180;Dbxref=NCBI_GP:UUE99854.1;Name=UUE99854.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001051801.1;locus_tag=NDY24_09180;product=50S ribosomal protein L33;protein_id=UUE99854.1;transl_table=11 CP098602.1 Genbank gene 2036556 2036792 . - . ID=gene-NDY24_09185;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=NDY24_09185 CP098602.1 Protein Homology CDS 2036556 2036792 . - 0 ID=cds-UUE99855.1;Parent=gene-NDY24_09185;Dbxref=NCBI_GP:UUE99855.1;Name=UUE99855.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019185625.1;locus_tag=NDY24_09185;product=50S ribosomal protein L28;protein_id=UUE99855.1;transl_table=11 CP098602.1 Genbank gene 2037069 2037701 . - . ID=gene-NDY24_09190;Name=NDY24_09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09190 CP098602.1 Protein Homology CDS 2037069 2037701 . - 0 ID=cds-UUE99856.1;Parent=gene-NDY24_09190;Dbxref=NCBI_GP:UUE99856.1;Name=UUE99856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572494.1;locus_tag=NDY24_09190;product=cation transporter;protein_id=UUE99856.1;transl_table=11 CP098602.1 Genbank gene 2037698 2040868 . - . ID=gene-NDY24_09195;Name=NDY24_09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09195 CP098602.1 Protein Homology CDS 2037698 2040868 . - 0 ID=cds-UUE99857.1;Parent=gene-NDY24_09195;Dbxref=NCBI_GP:UUE99857.1;Name=UUE99857.1;Ontology_term=GO:0051139,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=metal ion:proton antiporter activity|0051139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451687.1;locus_tag=NDY24_09195;product=CusA/CzcA family heavy metal efflux RND transporter;protein_id=UUE99857.1;transl_table=11 CP098602.1 Genbank gene 2041091 2042353 . - . ID=gene-NDY24_09200;Name=NDY24_09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09200 CP098602.1 Protein Homology CDS 2041091 2042353 . - 0 ID=cds-UUE99858.1;Parent=gene-NDY24_09200;Dbxref=NCBI_GP:UUE99858.1;Name=UUE99858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487715.1;locus_tag=NDY24_09200;product=efflux RND transporter periplasmic adaptor subunit;protein_id=UUE99858.1;transl_table=11 CP098602.1 Genbank gene 2042578 2043849 . - . ID=gene-NDY24_09205;Name=NDY24_09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09205 CP098602.1 Protein Homology CDS 2042578 2043849 . - 0 ID=cds-UUE99859.1;Parent=gene-NDY24_09205;Dbxref=NCBI_GP:UUE99859.1;Name=UUE99859.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902721.1;locus_tag=NDY24_09205;product=TolC family protein;protein_id=UUE99859.1;transl_table=11 CP098602.1 Genbank gene 2043905 2044288 . - . ID=gene-NDY24_09210;Name=NDY24_09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09210 CP098602.1 Protein Homology CDS 2043905 2044288 . - 0 ID=cds-UUE99860.1;Parent=gene-NDY24_09210;Dbxref=NCBI_GP:UUE99860.1;Name=UUE99860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374345.1;locus_tag=NDY24_09210;product=hypothetical protein;protein_id=UUE99860.1;transl_table=11 CP098602.1 Genbank gene 2044991 2046817 . - . ID=gene-NDY24_09215;Name=NDY24_09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09215 CP098602.1 Protein Homology CDS 2044991 2046817 . - 0 ID=cds-UUE99861.1;Parent=gene-NDY24_09215;Dbxref=NCBI_GP:UUE99861.1;Name=UUE99861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451652.1;locus_tag=NDY24_09215;product=DUF885 family protein;protein_id=UUE99861.1;transl_table=11 CP098602.1 Genbank pseudogene 2047043 2047683 . - . ID=gene-NDY24_09220;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=pseudogene;locus_tag=NDY24_09220;pseudo=true CP098602.1 Protein Homology CDS 2047043 2047683 . - 0 ID=cds-NDY24_09220;Parent=gene-NDY24_09220;Note=frameshifted;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901826.1;locus_tag=NDY24_09220;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2048039 2049667 . + . ID=gene-NDY24_09225;Name=NDY24_09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09225 CP098602.1 Protein Homology CDS 2048039 2049667 . + 0 ID=cds-UUE99862.1;Parent=gene-NDY24_09225;Dbxref=NCBI_GP:UUE99862.1;Name=UUE99862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901821.1;locus_tag=NDY24_09225;product=alkaline phosphatase D family protein;protein_id=UUE99862.1;transl_table=11 CP098602.1 Genbank gene 2049935 2051512 . + . ID=gene-NDY24_09230;Name=NDY24_09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09230 CP098602.1 Protein Homology CDS 2049935 2051512 . + 0 ID=cds-UUE99863.1;Parent=gene-NDY24_09230;Dbxref=NCBI_GP:UUE99863.1;Name=UUE99863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501577.1;locus_tag=NDY24_09230;product=alkaline phosphatase D family protein;protein_id=UUE99863.1;transl_table=11 CP098602.1 Genbank gene 2051645 2052241 . - . ID=gene-NDY24_09235;Name=NDY24_09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09235 CP098602.1 Protein Homology CDS 2051645 2052241 . - 0 ID=cds-UUE99864.1;Parent=gene-NDY24_09235;Dbxref=NCBI_GP:UUE99864.1;Name=UUE99864.1;Ontology_term=GO:0000287,GO:0008897;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575969.1;locus_tag=NDY24_09235;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=UUE99864.1;transl_table=11 CP098602.1 Genbank gene 2052368 2052619 . + . ID=gene-NDY24_09240;Name=NDY24_09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09240 CP098602.1 Protein Homology CDS 2052368 2052619 . + 0 ID=cds-UUE99865.1;Parent=gene-NDY24_09240;Dbxref=NCBI_GP:UUE99865.1;Name=UUE99865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409801.1;locus_tag=NDY24_09240;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=UUE99865.1;transl_table=11 CP098602.1 Genbank gene 2052689 2053126 . - . ID=gene-NDY24_09245;Name=NDY24_09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09245 CP098602.1 Protein Homology CDS 2052689 2053126 . - 0 ID=cds-UUE99866.1;Parent=gene-NDY24_09245;Dbxref=NCBI_GP:UUE99866.1;Name=UUE99866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575974.1;locus_tag=NDY24_09245;product=GFA family protein;protein_id=UUE99866.1;transl_table=11 CP098602.1 Genbank gene 2053123 2053902 . - . ID=gene-NDY24_09250;Name=xth;gbkey=Gene;gene=xth;gene_biotype=protein_coding;locus_tag=NDY24_09250 CP098602.1 Protein Homology CDS 2053123 2053902 . - 0 ID=cds-UUE99867.1;Parent=gene-NDY24_09250;Dbxref=NCBI_GP:UUE99867.1;Name=UUE99867.1;Ontology_term=GO:0006281,GO:0008853;gbkey=CDS;gene=xth;go_function=exodeoxyribonuclease III activity|0008853||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995484.1;locus_tag=NDY24_09250;product=exodeoxyribonuclease III;protein_id=UUE99867.1;transl_table=11 CP098602.1 Genbank gene 2053955 2055211 . - . ID=gene-NDY24_09255;Name=NDY24_09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09255 CP098602.1 Protein Homology CDS 2053955 2055211 . - 0 ID=cds-UUE99868.1;Parent=gene-NDY24_09255;Dbxref=NCBI_GP:UUE99868.1;Name=UUE99868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019238109.1;locus_tag=NDY24_09255;product=phosphodiester glycosidase family protein;protein_id=UUE99868.1;transl_table=11 CP098602.1 Genbank pseudogene 2055201 2056513 . - . ID=gene-NDY24_09260;Name=NDY24_09260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_09260;pseudo=true CP098602.1 Protein Homology CDS 2055201 2056513 . - 0 ID=cds-NDY24_09260;Parent=gene-NDY24_09260;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: protein motif:HMM:NF012801.2;locus_tag=NDY24_09260;product=TonB-dependent receptor;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2056402 2057886 . - . ID=gene-NDY24_09265;Name=NDY24_09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09265 CP098602.1 Protein Homology CDS 2056402 2057886 . - 0 ID=cds-UUE99869.1;Parent=gene-NDY24_09265;Dbxref=NCBI_GP:UUE99869.1;Name=UUE99869.1;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: protein motif:HMM:TIGR01782.1;locus_tag=NDY24_09265;product=TonB-dependent receptor;protein_id=UUE99869.1;transl_table=11 CP098602.1 Genbank gene 2057990 2059138 . + . ID=gene-NDY24_09270;Name=NDY24_09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09270 CP098602.1 Protein Homology CDS 2057990 2059138 . + 0 ID=cds-UUE99870.1;Parent=gene-NDY24_09270;Dbxref=NCBI_GP:UUE99870.1;Name=UUE99870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451663.1;locus_tag=NDY24_09270;product=ROK family transcriptional regulator;protein_id=UUE99870.1;transl_table=11 CP098602.1 Genbank gene 2059223 2059978 . - . ID=gene-NDY24_09275;Name=NDY24_09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09275 CP098602.1 GeneMarkS-2+ CDS 2059223 2059978 . - 0 ID=cds-UUE99871.1;Parent=gene-NDY24_09275;Dbxref=NCBI_GP:UUE99871.1;Name=UUE99871.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_09275;product=hypothetical protein;protein_id=UUE99871.1;transl_table=11 CP098602.1 Genbank gene 2060014 2060883 . - . ID=gene-NDY24_09280;Name=NDY24_09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09280 CP098602.1 Protein Homology CDS 2060014 2060883 . - 0 ID=cds-UUE99872.1;Parent=gene-NDY24_09280;Dbxref=NCBI_GP:UUE99872.1;Name=UUE99872.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024545.2;locus_tag=NDY24_09280;product=peptidyl-prolyl cis-trans isomerase;protein_id=UUE99872.1;transl_table=11 CP098602.1 Genbank gene 2060969 2062003 . - . ID=gene-NDY24_09285;Name=NDY24_09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09285 CP098602.1 Protein Homology CDS 2060969 2062003 . - 0 ID=cds-UUF00345.1;Parent=gene-NDY24_09285;Dbxref=NCBI_GP:UUF00345.1;Name=UUF00345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017908349.1;locus_tag=NDY24_09285;product=glycerophosphodiester phosphodiesterase family protein;protein_id=UUF00345.1;transl_table=11 CP098602.1 Genbank gene 2062282 2063045 . + . ID=gene-NDY24_09290;Name=NDY24_09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09290 CP098602.1 Protein Homology CDS 2062282 2062597 . + 0 ID=cds-UUE99873.1;Parent=gene-NDY24_09290;Dbxref=NCBI_GP:UUE99873.1;Name=UUE99873.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=NDY24_09290;product=IS5 family transposase;protein_id=UUE99873.1;transl_table=11 CP098602.1 Protein Homology CDS 2062597 2063045 . + 2 ID=cds-UUE99873.1;Parent=gene-NDY24_09290;Dbxref=NCBI_GP:UUE99873.1;Name=UUE99873.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=NDY24_09290;product=IS5 family transposase;protein_id=UUE99873.1;transl_table=11 CP098602.1 Genbank gene 2063336 2065063 . - . ID=gene-NDY24_09295;Name=NDY24_09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09295 CP098602.1 Protein Homology CDS 2063336 2065063 . - 0 ID=cds-UUE99874.1;Parent=gene-NDY24_09295;Dbxref=NCBI_GP:UUE99874.1;Name=UUE99874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304713.1;locus_tag=NDY24_09295;product=cation acetate symporter;protein_id=UUE99874.1;transl_table=11 CP098602.1 Genbank gene 2065060 2065377 . - . ID=gene-NDY24_09300;Name=NDY24_09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09300 CP098602.1 Protein Homology CDS 2065060 2065377 . - 0 ID=cds-UUE99875.1;Parent=gene-NDY24_09300;Dbxref=NCBI_GP:UUE99875.1;Name=UUE99875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451668.1;locus_tag=NDY24_09300;product=DUF485 domain-containing protein;protein_id=UUE99875.1;transl_table=11 CP098602.1 Genbank gene 2065447 2066829 . - . ID=gene-NDY24_09305;Name=NDY24_09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09305 CP098602.1 Protein Homology CDS 2065447 2066829 . - 0 ID=cds-UUE99876.1;Parent=gene-NDY24_09305;Dbxref=NCBI_GP:UUE99876.1;Name=UUE99876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575984.1;locus_tag=NDY24_09305;product=porin;protein_id=UUE99876.1;transl_table=11 CP098602.1 Genbank gene 2067125 2069068 . + . ID=gene-NDY24_09310;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=NDY24_09310 CP098602.1 Protein Homology CDS 2067125 2069068 . + 0 ID=cds-UUE99877.1;Parent=gene-NDY24_09310;Dbxref=NCBI_GP:UUE99877.1;Name=UUE99877.1;Ontology_term=GO:0019427,GO:0003987;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003466986.1;locus_tag=NDY24_09310;product=acetate--CoA ligase;protein_id=UUE99877.1;transl_table=11 CP098602.1 Genbank gene 2069309 2069977 . + . ID=gene-NDY24_09315;Name=NDY24_09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09315 CP098602.1 Protein Homology CDS 2069309 2069977 . + 0 ID=cds-UUE99878.1;Parent=gene-NDY24_09315;Dbxref=NCBI_GP:UUE99878.1;Name=UUE99878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156036.1;locus_tag=NDY24_09315;product=response regulator transcription factor;protein_id=UUE99878.1;transl_table=11 CP098602.1 Genbank gene 2070040 2070372 . - . ID=gene-NDY24_09320;Name=NDY24_09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09320 CP098602.1 GeneMarkS-2+ CDS 2070040 2070372 . - 0 ID=cds-UUE99879.1;Parent=gene-NDY24_09320;Dbxref=NCBI_GP:UUE99879.1;Name=UUE99879.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_09320;product=hypothetical protein;protein_id=UUE99879.1;transl_table=11 CP098602.1 Genbank gene 2070809 2071729 . + . ID=gene-NDY24_09325;Name=NDY24_09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09325 CP098602.1 Protein Homology CDS 2070809 2071729 . + 0 ID=cds-UUE99880.1;Parent=gene-NDY24_09325;Dbxref=NCBI_GP:UUE99880.1;Name=UUE99880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451673.1;locus_tag=NDY24_09325;product=DUF4424 domain-containing protein;protein_id=UUE99880.1;transl_table=11 CP098602.1 Genbank gene 2072009 2072572 . + . ID=gene-NDY24_09330;Name=NDY24_09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09330 CP098602.1 Protein Homology CDS 2072009 2072572 . + 0 ID=cds-UUF00346.1;Parent=gene-NDY24_09330;Dbxref=NCBI_GP:UUF00346.1;Name=UUF00346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156037.1;locus_tag=NDY24_09330;product=TlpA family protein disulfide reductase;protein_id=UUF00346.1;transl_table=11 CP098602.1 Genbank gene 2072576 2072779 . + . ID=gene-NDY24_09335;Name=NDY24_09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09335 CP098602.1 Protein Homology CDS 2072576 2072779 . + 0 ID=cds-UUE99881.1;Parent=gene-NDY24_09335;Dbxref=NCBI_GP:UUE99881.1;Name=UUE99881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849177.1;locus_tag=NDY24_09335;product=hypothetical protein;protein_id=UUE99881.1;transl_table=11 CP098602.1 Genbank pseudogene 2073100 2074150 . + . ID=gene-NDY24_09340;Name=NDY24_09340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_09340;pseudo=true CP098602.1 Protein Homology CDS 2073100 2074150 . + 0 ID=cds-NDY24_09340;Parent=gene-NDY24_09340;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260811.1;locus_tag=NDY24_09340;product=aldo/keto reductase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2074147 2075019 . + . ID=gene-NDY24_09345;Name=NDY24_09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09345 CP098602.1 Protein Homology CDS 2074147 2075019 . + 0 ID=cds-UUE99882.1;Parent=gene-NDY24_09345;Dbxref=NCBI_GP:UUE99882.1;Name=UUE99882.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930619.1;locus_tag=NDY24_09345;product=amidohydrolase family protein;protein_id=UUE99882.1;transl_table=11 CP098602.1 Genbank gene 2075016 2075786 . + . ID=gene-NDY24_09350;Name=NDY24_09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09350 CP098602.1 Protein Homology CDS 2075016 2075786 . + 0 ID=cds-UUE99883.1;Parent=gene-NDY24_09350;Dbxref=NCBI_GP:UUE99883.1;Name=UUE99883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439611.1;locus_tag=NDY24_09350;product=SDR family oxidoreductase;protein_id=UUE99883.1;transl_table=11 CP098602.1 Genbank gene 2075955 2076812 . + . ID=gene-NDY24_09355;Name=NDY24_09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09355 CP098602.1 Protein Homology CDS 2075955 2076812 . + 0 ID=cds-UUE99884.1;Parent=gene-NDY24_09355;Dbxref=NCBI_GP:UUE99884.1;Name=UUE99884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091443.1;locus_tag=NDY24_09355;product=fumarylacetoacetate hydrolase family protein;protein_id=UUE99884.1;transl_table=11 CP098602.1 Genbank gene 2077293 2078612 . + . ID=gene-NDY24_09360;Name=NDY24_09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09360 CP098602.1 Protein Homology CDS 2077293 2078612 . + 0 ID=cds-UUE99885.1;Parent=gene-NDY24_09360;Dbxref=NCBI_GP:UUE99885.1;Name=UUE99885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374394.1;locus_tag=NDY24_09360;product=L-fuconate dehydratase;protein_id=UUE99885.1;transl_table=11 CP098602.1 Genbank gene 2079532 2079900 . - . ID=gene-NDY24_09365;Name=NDY24_09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09365 CP098602.1 Protein Homology CDS 2079532 2079900 . - 0 ID=cds-UUE99886.1;Parent=gene-NDY24_09365;Dbxref=NCBI_GP:UUE99886.1;Name=UUE99886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451877.1;locus_tag=NDY24_09365;product=L-fucose mutarotase;protein_id=UUE99886.1;transl_table=11 CP098602.1 Genbank gene 2079897 2081201 . - . ID=gene-NDY24_09370;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=NDY24_09370 CP098602.1 Protein Homology CDS 2079897 2081201 . - 0 ID=cds-UUE99887.1;Parent=gene-NDY24_09370;Dbxref=NCBI_GP:UUE99887.1;Name=UUE99887.1;Ontology_term=GO:0015756,GO:0015535,GO:0005887;gbkey=CDS;gene=fucP;go_component=integral component of plasma membrane|0005887||IEA;go_function=fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451876.1;locus_tag=NDY24_09370;product=L-fucose:H+ symporter permease;protein_id=UUE99887.1;transl_table=11 CP098602.1 Genbank gene 2081382 2082131 . + . ID=gene-NDY24_09375;Name=NDY24_09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09375 CP098602.1 Protein Homology CDS 2081382 2082131 . + 0 ID=cds-UUE99888.1;Parent=gene-NDY24_09375;Dbxref=NCBI_GP:UUE99888.1;Name=UUE99888.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156047.1;locus_tag=NDY24_09375;product=helix-turn-helix domain-containing protein;protein_id=UUE99888.1;transl_table=11 CP098602.1 Genbank gene 2082246 2083361 . + . ID=gene-NDY24_09380;Name=NDY24_09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09380 CP098602.1 Protein Homology CDS 2082246 2083361 . + 0 ID=cds-UUE99889.1;Parent=gene-NDY24_09380;Dbxref=NCBI_GP:UUE99889.1;Name=UUE99889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156048.1;locus_tag=NDY24_09380;product=AraC family transcriptional regulator;protein_id=UUE99889.1;transl_table=11 CP098602.1 Genbank gene 2083471 2084964 . + . ID=gene-NDY24_09385;Name=NDY24_09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09385 CP098602.1 Protein Homology CDS 2083471 2084964 . + 0 ID=cds-UUF00347.1;Parent=gene-NDY24_09385;Dbxref=NCBI_GP:UUF00347.1;Name=UUF00347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451873.1;locus_tag=NDY24_09385;product=S41 family peptidase;protein_id=UUF00347.1;transl_table=11 CP098602.1 cmsearch riboswitch 2085080 2085208 . + . ID=id-CP098602.1:2085080..2085208;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP098602.1 Genbank gene 2085255 2085839 . + . ID=gene-NDY24_09390;Name=NDY24_09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09390 CP098602.1 Protein Homology CDS 2085255 2085839 . + 0 ID=cds-UUE99890.1;Parent=gene-NDY24_09390;Dbxref=NCBI_GP:UUE99890.1;Name=UUE99890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_031424890.1;locus_tag=NDY24_09390;product=manganese efflux pump MntP family protein;protein_id=UUE99890.1;transl_table=11 CP098602.1 Genbank gene 2086020 2089469 . - . ID=gene-NDY24_09395;Name=NDY24_09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09395 CP098602.1 Protein Homology CDS 2086020 2089469 . - 0 ID=cds-UUE99891.1;Parent=gene-NDY24_09395;Dbxref=NCBI_GP:UUE99891.1;Name=UUE99891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487640.1;locus_tag=NDY24_09395;product=hybrid sensor histidine kinase/response regulator;protein_id=UUE99891.1;transl_table=11 CP098602.1 Genbank gene 2090047 2092449 . - . ID=gene-NDY24_09400;Name=NDY24_09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09400 CP098602.1 Protein Homology CDS 2090047 2092449 . - 0 ID=cds-UUF00348.1;Parent=gene-NDY24_09400;Dbxref=NCBI_GP:UUF00348.1;Name=UUF00348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304638.1;locus_tag=NDY24_09400;product=NdvB protein;protein_id=UUF00348.1;transl_table=11 CP098602.1 Genbank gene 2092467 2093849 . - . ID=gene-NDY24_09405;Name=NDY24_09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09405 CP098602.1 Protein Homology CDS 2092467 2093849 . - 0 ID=cds-UUF00349.1;Parent=gene-NDY24_09405;Dbxref=NCBI_GP:UUF00349.1;Name=UUF00349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901774.1;locus_tag=NDY24_09405;product=MFS transporter;protein_id=UUF00349.1;transl_table=11 CP098602.1 Genbank gene 2094008 2094592 . + . ID=gene-NDY24_09410;Name=NDY24_09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09410 CP098602.1 Protein Homology CDS 2094008 2094592 . + 0 ID=cds-UUE99892.1;Parent=gene-NDY24_09410;Dbxref=NCBI_GP:UUE99892.1;Name=UUE99892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449108.1;locus_tag=NDY24_09410;product=gluconokinase;protein_id=UUE99892.1;transl_table=11 CP098602.1 Genbank gene 2095085 2096815 . + . ID=gene-NDY24_09415;Name=NDY24_09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09415 CP098602.1 Protein Homology CDS 2095085 2096815 . + 0 ID=cds-UUE99893.1;Parent=gene-NDY24_09415;Dbxref=NCBI_GP:UUE99893.1;Name=UUE99893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005923088.1;locus_tag=NDY24_09415;product=PQQ-binding-like beta-propeller repeat protein;protein_id=UUE99893.1;transl_table=11 CP098602.1 Genbank gene 2096914 2097141 . - . ID=gene-NDY24_09420;Name=NDY24_09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09420 CP098602.1 Protein Homology CDS 2096914 2097141 . - 0 ID=cds-UUE99894.1;Parent=gene-NDY24_09420;Dbxref=NCBI_GP:UUE99894.1;Name=UUE99894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849816.1;locus_tag=NDY24_09420;product=hypothetical protein;protein_id=UUE99894.1;transl_table=11 CP098602.1 Genbank gene 2097122 2097571 . - . ID=gene-NDY24_09425;Name=NDY24_09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09425 CP098602.1 Protein Homology CDS 2097122 2097571 . - 0 ID=cds-UUE99895.1;Parent=gene-NDY24_09425;Dbxref=NCBI_GP:UUE99895.1;Name=UUE99895.1;Ontology_term=GO:0003855;gbkey=CDS;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966506.1;locus_tag=NDY24_09425;product=type II 3-dehydroquinate dehydratase;protein_id=UUE99895.1;transl_table=11 CP098602.1 Genbank gene 2097583 2098011 . - . ID=gene-NDY24_09430;Name=NDY24_09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09430 CP098602.1 Protein Homology CDS 2097583 2098011 . - 0 ID=cds-UUE99896.1;Parent=gene-NDY24_09430;Dbxref=NCBI_GP:UUE99896.1;Name=UUE99896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303396.1;locus_tag=NDY24_09430;product=hypothetical protein;protein_id=UUE99896.1;transl_table=11 CP098602.1 Genbank gene 2098242 2098841 . - . ID=gene-NDY24_09435;Name=NDY24_09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09435 CP098602.1 Protein Homology CDS 2098242 2098841 . - 0 ID=cds-UUE99897.1;Parent=gene-NDY24_09435;Dbxref=NCBI_GP:UUE99897.1;Name=UUE99897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439623.1;locus_tag=NDY24_09435;product=hypothetical protein;protein_id=UUE99897.1;transl_table=11 CP098602.1 Genbank gene 2098823 2102677 . - . ID=gene-NDY24_09440;Name=NDY24_09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09440 CP098602.1 Protein Homology CDS 2098823 2102677 . - 0 ID=cds-UUE99898.1;Parent=gene-NDY24_09440;Dbxref=NCBI_GP:UUE99898.1;Name=UUE99898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156059.1;locus_tag=NDY24_09440;product=translocation/assembly module TamB;protein_id=UUE99898.1;transl_table=11 CP098602.1 Genbank gene 2102674 2104455 . - . ID=gene-NDY24_09445;Name=NDY24_09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09445 CP098602.1 Protein Homology CDS 2102674 2104455 . - 0 ID=cds-UUE99899.1;Parent=gene-NDY24_09445;Dbxref=NCBI_GP:UUE99899.1;Name=UUE99899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349065.1;locus_tag=NDY24_09445;product=autotransporter assembly complex protein TamA;protein_id=UUE99899.1;transl_table=11 CP098602.1 Genbank gene 2104711 2107401 . + . ID=gene-NDY24_09450;Name=NDY24_09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09450 CP098602.1 Protein Homology CDS 2104711 2107401 . + 0 ID=cds-UUF00350.1;Parent=gene-NDY24_09450;Dbxref=NCBI_GP:UUF00350.1;Name=UUF00350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163068.1;locus_tag=NDY24_09450;product=TonB-dependent receptor;protein_id=UUF00350.1;transl_table=11 CP098602.1 Genbank gene 2107656 2109245 . - . ID=gene-NDY24_09455;Name=NDY24_09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09455 CP098602.1 Protein Homology CDS 2107656 2109245 . - 0 ID=cds-UUE99900.1;Parent=gene-NDY24_09455;Dbxref=NCBI_GP:UUE99900.1;Name=UUE99900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156062.1;locus_tag=NDY24_09455;product=sulfotransferase;protein_id=UUE99900.1;transl_table=11 CP098602.1 Genbank gene 2109245 2111482 . - . ID=gene-NDY24_09460;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=NDY24_09460 CP098602.1 Protein Homology CDS 2109245 2111482 . - 0 ID=cds-UUE99901.1;Parent=gene-NDY24_09460;Dbxref=NCBI_GP:UUE99901.1;Name=UUE99901.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyS;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409707.1;locus_tag=NDY24_09460;product=glycine--tRNA ligase subunit beta;protein_id=UUE99901.1;transl_table=11 CP098602.1 Genbank gene 2111777 2112685 . - . ID=gene-NDY24_09465;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=NDY24_09465 CP098602.1 Protein Homology CDS 2111777 2112685 . - 0 ID=cds-UUE99902.1;Parent=gene-NDY24_09465;Dbxref=NCBI_GP:UUE99902.1;Name=UUE99902.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyQ;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156064.1;locus_tag=NDY24_09465;product=glycine--tRNA ligase subunit alpha;protein_id=UUE99902.1;transl_table=11 CP098602.1 Genbank gene 2112776 2114590 . + . ID=gene-NDY24_09470;Name=NDY24_09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09470 CP098602.1 Protein Homology CDS 2112776 2114590 . + 0 ID=cds-UUE99903.1;Parent=gene-NDY24_09470;Dbxref=NCBI_GP:UUE99903.1;Name=UUE99903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002803759.1;locus_tag=NDY24_09470;product=GspE/PulE family protein;protein_id=UUE99903.1;transl_table=11 CP098602.1 Genbank pseudogene 2115059 2122201 . - . ID=gene-NDY24_09475;Name=NDY24_09475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_09475;pseudo=true CP098602.1 Protein Homology CDS 2115059 2122201 . - 0 ID=cds-NDY24_09475;Parent=gene-NDY24_09475;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301754.1;locus_tag=NDY24_09475;product=type III effector protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2122674 2123426 . + . ID=gene-NDY24_09480;Name=NDY24_09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09480 CP098602.1 Protein Homology CDS 2122674 2123426 . + 0 ID=cds-UUE99904.1;Parent=gene-NDY24_09480;Dbxref=NCBI_GP:UUE99904.1;Name=UUE99904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154683.1;locus_tag=NDY24_09480;product=glutamine amidotransferase;protein_id=UUE99904.1;transl_table=11 CP098602.1 Genbank gene 2123484 2124383 . + . ID=gene-NDY24_09485;Name=NDY24_09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09485 CP098602.1 Protein Homology CDS 2123484 2124383 . + 0 ID=cds-UUE99905.1;Parent=gene-NDY24_09485;Dbxref=NCBI_GP:UUE99905.1;Name=UUE99905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154682.1;locus_tag=NDY24_09485;product=hypothetical protein;protein_id=UUE99905.1;transl_table=11 CP098602.1 Genbank pseudogene 2124723 2125462 . - . ID=gene-NDY24_09490;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=pseudogene;locus_tag=NDY24_09490;pseudo=true CP098602.1 Protein Homology CDS 2124723 2125462 . - 0 ID=cds-NDY24_09490;Parent=gene-NDY24_09490;Note=frameshifted;Ontology_term=GO:0015628,GO:0005887;gbkey=CDS;gene=tatC;go_component=integral component of plasma membrane|0005887||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005929678.1;locus_tag=NDY24_09490;product=twin-arginine translocase subunit TatC;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2125521 2126135 . - . ID=gene-NDY24_09495;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=NDY24_09495 CP098602.1 Protein Homology CDS 2125521 2126135 . - 0 ID=cds-UUE99906.1;Parent=gene-NDY24_09495;Dbxref=NCBI_GP:UUE99906.1;Name=UUE99906.1;Ontology_term=GO:0015031,GO:0015628;gbkey=CDS;gene=tatB;go_process=protein transport|0015031||IEA,protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349077.1;locus_tag=NDY24_09495;product=Sec-independent protein translocase protein TatB;protein_id=UUE99906.1;transl_table=11 CP098602.1 Genbank gene 2126151 2126378 . - . ID=gene-NDY24_09500;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=NDY24_09500 CP098602.1 Protein Homology CDS 2126151 2126378 . - 0 ID=cds-UUE99907.1;Parent=gene-NDY24_09500;Dbxref=NCBI_GP:UUE99907.1;Name=UUE99907.1;Ontology_term=GO:0043953,GO:0016021;gbkey=CDS;gene=tatA;go_component=integral component of membrane|0016021||IEA;go_process=protein transport by the Tat complex|0043953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449086.1;locus_tag=NDY24_09500;product=Sec-independent protein translocase subunit TatA;protein_id=UUE99907.1;transl_table=11 CP098602.1 Genbank gene 2126451 2127353 . - . ID=gene-NDY24_09505;Name=NDY24_09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09505 CP098602.1 Protein Homology CDS 2126451 2127353 . - 0 ID=cds-UUE99908.1;Parent=gene-NDY24_09505;Dbxref=NCBI_GP:UUE99908.1;Name=UUE99908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154679.1;locus_tag=NDY24_09505;product=YSC84-related protein;protein_id=UUE99908.1;transl_table=11 CP098602.1 Genbank gene 2127508 2128473 . + . ID=gene-NDY24_09510;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=NDY24_09510 CP098602.1 Protein Homology CDS 2127508 2128473 . + 0 ID=cds-UUE99909.1;Parent=gene-NDY24_09510;Dbxref=NCBI_GP:UUE99909.1;Name=UUE99909.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505180.1;locus_tag=NDY24_09510;product=ferrochelatase;protein_id=UUE99909.1;transl_table=11 CP098602.1 Genbank gene 2128476 2129339 . + . ID=gene-NDY24_09515;Name=NDY24_09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09515 CP098602.1 Protein Homology CDS 2128476 2129339 . + 0 ID=cds-UUF00351.1;Parent=gene-NDY24_09515;Dbxref=NCBI_GP:UUF00351.1;Name=UUF00351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449083.1;locus_tag=NDY24_09515;product=alpha/beta hydrolase;protein_id=UUF00351.1;transl_table=11 CP098602.1 Genbank gene 2129434 2130219 . - . ID=gene-NDY24_09520;Name=NDY24_09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09520 CP098602.1 Protein Homology CDS 2129434 2130219 . - 0 ID=cds-UUE99910.1;Parent=gene-NDY24_09520;Dbxref=NCBI_GP:UUE99910.1;Name=UUE99910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374496.1;locus_tag=NDY24_09520;product=M48 family metallopeptidase;protein_id=UUE99910.1;transl_table=11 CP098602.1 Genbank gene 2131035 2131940 . - . ID=gene-NDY24_09525;Name=NDY24_09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09525 CP098602.1 Protein Homology CDS 2131035 2131940 . - 0 ID=cds-UUE99911.1;Parent=gene-NDY24_09525;Dbxref=NCBI_GP:UUE99911.1;Name=UUE99911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154674.1;locus_tag=NDY24_09525;product=recombination-associated protein RdgC;protein_id=UUE99911.1;transl_table=11 CP098602.1 Genbank pseudogene 2132004 2132919 . - . ID=gene-NDY24_09530;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=pseudogene;locus_tag=NDY24_09530;pseudo=true CP098602.1 Protein Homology CDS 2132004 2132919 . - 0 ID=cds-NDY24_09530;Parent=gene-NDY24_09530;Note=frameshifted;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374500.1;locus_tag=NDY24_09530;product=tRNA 2-thiocytidine(32) synthetase TtcA;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2133247 2134584 . + . ID=gene-NDY24_09535;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=NDY24_09535 CP098602.1 Protein Homology CDS 2133247 2134584 . + 0 ID=cds-UUE99912.1;Parent=gene-NDY24_09535;Dbxref=NCBI_GP:UUE99912.1;Name=UUE99912.1;Ontology_term=GO:0006098,GO:0042732,GO:0000287,GO:0009045;gbkey=CDS;gene=xylA;go_function=magnesium ion binding|0000287||IEA,xylose isomerase activity|0009045||IEA;go_process=pentose-phosphate shunt|0006098||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171248.1;locus_tag=NDY24_09535;product=xylose isomerase;protein_id=UUE99912.1;transl_table=11 CP098602.1 Genbank gene 2134654 2135643 . - . ID=gene-NDY24_09540;Name=NDY24_09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09540 CP098602.1 Protein Homology CDS 2134654 2135643 . - 0 ID=cds-UUE99913.1;Parent=gene-NDY24_09540;Dbxref=NCBI_GP:UUE99913.1;Name=UUE99913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011039170.1;locus_tag=NDY24_09540;product=LacI family DNA-binding transcriptional regulator;protein_id=UUE99913.1;transl_table=11 CP098602.1 Genbank gene 2135621 2135782 . + . ID=gene-NDY24_09545;Name=NDY24_09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09545 CP098602.1 Protein Homology CDS 2135621 2135782 . + 0 ID=cds-UUE99914.1;Parent=gene-NDY24_09545;Dbxref=NCBI_GP:UUE99914.1;Name=UUE99914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903660.1;locus_tag=NDY24_09545;product=hypothetical protein;protein_id=UUE99914.1;transl_table=11 CP098602.1 Genbank gene 2135889 2138099 . + . ID=gene-NDY24_09550;Name=NDY24_09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09550 CP098602.1 Protein Homology CDS 2135889 2138099 . + 0 ID=cds-UUE99915.1;Parent=gene-NDY24_09550;Dbxref=NCBI_GP:UUE99915.1;Name=UUE99915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903661.1;locus_tag=NDY24_09550;product=alpha-glucuronidase;protein_id=UUE99915.1;transl_table=11 CP098602.1 Genbank gene 2138096 2140060 . + . ID=gene-NDY24_09555;Name=NDY24_09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09555 CP098602.1 Protein Homology CDS 2138096 2140060 . + 0 ID=cds-UUE99916.1;Parent=gene-NDY24_09555;Dbxref=NCBI_GP:UUE99916.1;Name=UUE99916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155225.1;locus_tag=NDY24_09555;product=9-O-acetylesterase;protein_id=UUE99916.1;transl_table=11 CP098602.1 Genbank gene 2140072 2141331 . + . ID=gene-NDY24_09560;Name=NDY24_09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09560 CP098602.1 Protein Homology CDS 2140072 2141331 . + 0 ID=cds-UUE99917.1;Parent=gene-NDY24_09560;Dbxref=NCBI_GP:UUE99917.1;Name=UUE99917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349089.1;locus_tag=NDY24_09560;product=D-galactonate dehydratase family protein;protein_id=UUE99917.1;transl_table=11 CP098602.1 Genbank pseudogene 2141331 2143028 . + . ID=gene-NDY24_09565;Name=NDY24_09565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_09565;pseudo=true CP098602.1 Protein Homology CDS 2141331 2143028 . + 0 ID=cds-NDY24_09565;Parent=gene-NDY24_09565;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005992540.1;locus_tag=NDY24_09565;product=glycoside hydrolase family 43 protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 2143031 2145720 . + . ID=gene-NDY24_09570;Name=NDY24_09570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_09570;pseudo=true CP098602.1 Protein Homology CDS 2143031 2145720 . + 0 ID=cds-NDY24_09570;Parent=gene-NDY24_09570;Note=frameshifted;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439642.1;locus_tag=NDY24_09570;product=glycoside hydrolase family 3 C-terminal domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2145832 2147295 . + . ID=gene-NDY24_09575;Name=NDY24_09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09575 CP098602.1 Protein Homology CDS 2145832 2147295 . + 0 ID=cds-UUE99918.1;Parent=gene-NDY24_09575;Dbxref=NCBI_GP:UUE99918.1;Name=UUE99918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011039176.1;locus_tag=NDY24_09575;product=mannitol dehydrogenase family protein;protein_id=UUE99918.1;transl_table=11 CP098602.1 Genbank gene 2147510 2148613 . + . ID=gene-NDY24_09580;Name=NDY24_09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09580 CP098602.1 Protein Homology CDS 2147510 2148613 . + 0 ID=cds-UUE99919.1;Parent=gene-NDY24_09580;Dbxref=NCBI_GP:UUE99919.1;Name=UUE99919.1;Ontology_term=GO:0006304,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377880.1;locus_tag=NDY24_09580;product=type I restriction endonuclease;protein_id=UUE99919.1;transl_table=11 CP098602.1 Genbank gene 2148706 2149092 . - . ID=gene-NDY24_09585;Name=NDY24_09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09585 CP098602.1 Protein Homology CDS 2148706 2149092 . - 0 ID=cds-UUF00352.1;Parent=gene-NDY24_09585;Dbxref=NCBI_GP:UUF00352.1;Name=UUF00352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903667.1;locus_tag=NDY24_09585;product=VOC family protein;protein_id=UUF00352.1;transl_table=11 CP098602.1 Genbank gene 2149655 2149855 . + . ID=gene-NDY24_09590;Name=NDY24_09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09590 CP098602.1 Protein Homology CDS 2149655 2149855 . + 0 ID=cds-UUE99920.1;Parent=gene-NDY24_09590;Dbxref=NCBI_GP:UUE99920.1;Name=UUE99920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903668.1;locus_tag=NDY24_09590;product=type I toxin-antitoxin system SymE family toxin;protein_id=UUE99920.1;transl_table=11 CP098602.1 Genbank gene 2150077 2150235 . + . ID=gene-NDY24_09595;Name=NDY24_09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09595 CP098602.1 Protein Homology CDS 2150077 2150235 . + 0 ID=cds-UUE99921.1;Parent=gene-NDY24_09595;Dbxref=NCBI_GP:UUE99921.1;Name=UUE99921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374525.1;locus_tag=NDY24_09595;product=DUF2256 domain-containing protein;protein_id=UUE99921.1;transl_table=11 CP098602.1 Genbank pseudogene 2150471 2151476 . + . ID=gene-NDY24_09600;Name=NDY24_09600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_09600;pseudo=true CP098602.1 Protein Homology CDS 2150471 2151476 . + 0 ID=cds-NDY24_09600;Parent=gene-NDY24_09600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004148619.1;locus_tag=NDY24_09600;product=2-hydroxyacid dehydrogenase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2151515 2153137 . + . ID=gene-NDY24_09605;Name=NDY24_09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09605 CP098602.1 Protein Homology CDS 2151515 2153137 . + 0 ID=cds-UUE99922.1;Parent=gene-NDY24_09605;Dbxref=NCBI_GP:UUE99922.1;Name=UUE99922.1;Ontology_term=GO:0015718,GO:0008028,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_function=monocarboxylic acid transmembrane transporter activity|0008028||IEA;go_process=monocarboxylic acid transport|0015718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448672.1;locus_tag=NDY24_09605;product=lactate permease LctP family transporter;protein_id=UUE99922.1;transl_table=11 CP098602.1 Genbank gene 2153414 2154448 . + . ID=gene-NDY24_09610;Name=NDY24_09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09610 CP098602.1 Protein Homology CDS 2153414 2154448 . + 0 ID=cds-UUE99923.1;Parent=gene-NDY24_09610;Dbxref=NCBI_GP:UUE99923.1;Name=UUE99923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011039181.1;locus_tag=NDY24_09610;product=kelch repeat-containing protein;protein_id=UUE99923.1;transl_table=11 CP098602.1 Genbank gene 2154601 2154957 . + . ID=gene-NDY24_09615;Name=NDY24_09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09615 CP098602.1 GeneMarkS-2+ CDS 2154601 2154957 . + 0 ID=cds-UUE99924.1;Parent=gene-NDY24_09615;Dbxref=NCBI_GP:UUE99924.1;Name=UUE99924.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_09615;product=DUF3800 domain-containing protein;protein_id=UUE99924.1;transl_table=11 CP098602.1 Genbank gene 2154927 2155304 . + . ID=gene-NDY24_09620;Name=NDY24_09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09620 CP098602.1 GeneMarkS-2+ CDS 2154927 2155304 . + 0 ID=cds-UUE99925.1;Parent=gene-NDY24_09620;Dbxref=NCBI_GP:UUE99925.1;Name=UUE99925.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_09620;product=hypothetical protein;protein_id=UUE99925.1;transl_table=11 CP098602.1 Genbank pseudogene 2155654 2156704 . - . ID=gene-NDY24_09625;Name=NDY24_09625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_09625;pseudo=true CP098602.1 Protein Homology CDS 2155654 2156704 . - 0 ID=cds-NDY24_09625;Parent=gene-NDY24_09625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159657.1;locus_tag=NDY24_09625;product=SMP-30/gluconolactonase/LRE family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2156781 2157965 . - . ID=gene-NDY24_09630;Name=NDY24_09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09630 CP098602.1 Protein Homology CDS 2156781 2157965 . - 0 ID=cds-UUE99926.1;Parent=gene-NDY24_09630;Dbxref=NCBI_GP:UUE99926.1;Name=UUE99926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448675.1;locus_tag=NDY24_09630;product=endo-1%2C4-beta-xylanase;protein_id=UUE99926.1;transl_table=11 CP098602.1 Genbank pseudogene 2158016 2160659 . - . ID=gene-NDY24_09635;Name=NDY24_09635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_09635;pseudo=true CP098602.1 Protein Homology CDS 2158016 2160659 . - 0 ID=cds-NDY24_09635;Parent=gene-NDY24_09635;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052842.1;locus_tag=NDY24_09635;product=DUF4982 domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2160892 2162328 . - . ID=gene-NDY24_09640;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=NDY24_09640 CP098602.1 Protein Homology CDS 2160892 2162328 . - 0 ID=cds-UUE99927.1;Parent=gene-NDY24_09640;Dbxref=NCBI_GP:UUE99927.1;Name=UUE99927.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439655.1;locus_tag=NDY24_09640;product=glucuronate isomerase;protein_id=UUE99927.1;transl_table=11 CP098602.1 Genbank gene 2162359 2163348 . - . ID=gene-NDY24_09645;Name=NDY24_09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09645 CP098602.1 Protein Homology CDS 2162359 2163348 . - 0 ID=cds-UUE99928.1;Parent=gene-NDY24_09645;Dbxref=NCBI_GP:UUE99928.1;Name=UUE99928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449514.1;locus_tag=NDY24_09645;product=endo-1%2C4-beta-xylanase;protein_id=UUE99928.1;transl_table=11 CP098602.1 Genbank gene 2163359 2164684 . - . ID=gene-NDY24_09650;Name=NDY24_09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09650 CP098602.1 Protein Homology CDS 2163359 2164684 . - 0 ID=cds-UUE99929.1;Parent=gene-NDY24_09650;Dbxref=NCBI_GP:UUE99929.1;Name=UUE99929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449515.1;locus_tag=NDY24_09650;product=MFS transporter;protein_id=UUE99929.1;transl_table=11 CP098602.1 Genbank gene 2165146 2168085 . + . ID=gene-NDY24_09655;Name=NDY24_09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09655 CP098602.1 Protein Homology CDS 2165146 2168085 . + 0 ID=cds-UUE99930.1;Parent=gene-NDY24_09655;Dbxref=NCBI_GP:UUE99930.1;Name=UUE99930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155199.1;locus_tag=NDY24_09655;product=TonB-dependent receptor;protein_id=UUE99930.1;transl_table=11 CP098602.1 Genbank gene 2168229 2169716 . + . ID=gene-NDY24_09660;Name=NDY24_09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09660 CP098602.1 Protein Homology CDS 2168229 2169716 . + 0 ID=cds-UUE99931.1;Parent=gene-NDY24_09660;Dbxref=NCBI_GP:UUE99931.1;Name=UUE99931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155198.1;locus_tag=NDY24_09660;product=MFS transporter;protein_id=UUE99931.1;transl_table=11 CP098602.1 Genbank pseudogene 2169751 2170788 . + . ID=gene-NDY24_09665;Name=NDY24_09665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_09665;pseudo=true CP098602.1 Protein Homology CDS 2169751 2170788 . + 0 ID=cds-NDY24_09665;Parent=gene-NDY24_09665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573829.1;locus_tag=NDY24_09665;product=glycoside hydrolase family 43 protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2171122 2171655 . + . ID=gene-NDY24_09670;Name=NDY24_09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09670 CP098602.1 Protein Homology CDS 2171122 2171655 . + 0 ID=cds-UUE99932.1;Parent=gene-NDY24_09670;Dbxref=NCBI_GP:UUE99932.1;Name=UUE99932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155196.1;locus_tag=NDY24_09670;product=lipocalin family protein;protein_id=UUE99932.1;transl_table=11 CP098602.1 Genbank gene 2171744 2172097 . - . ID=gene-NDY24_09675;Name=NDY24_09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09675 CP098602.1 Protein Homology CDS 2171744 2172097 . - 0 ID=cds-UUE99933.1;Parent=gene-NDY24_09675;Dbxref=NCBI_GP:UUE99933.1;Name=UUE99933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300486.1;locus_tag=NDY24_09675;product=ribonuclease E inhibitor RraB;protein_id=UUE99933.1;transl_table=11 CP098602.1 Genbank pseudogene 2172292 2172865 . - . ID=gene-NDY24_09680;Name=NDY24_09680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_09680;pseudo=true CP098602.1 Protein Homology CDS 2172292 2172865 . - 0 ID=cds-NDY24_09680;Parent=gene-NDY24_09680;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449526.1;locus_tag=NDY24_09680;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2173025 2173228 . + . ID=gene-NDY24_09685;Name=NDY24_09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09685 CP098602.1 Protein Homology CDS 2173025 2173228 . + 0 ID=cds-UUF00353.1;Parent=gene-NDY24_09685;Dbxref=NCBI_GP:UUF00353.1;Name=UUF00353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573820.1;locus_tag=NDY24_09685;product=YdcH family protein;protein_id=UUF00353.1;transl_table=11 CP098602.1 Genbank gene 2173563 2174546 . - . ID=gene-NDY24_09690;Name=NDY24_09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09690 CP098602.1 Protein Homology CDS 2173563 2174546 . - 0 ID=cds-UUE99934.1;Parent=gene-NDY24_09690;Dbxref=NCBI_GP:UUE99934.1;Name=UUE99934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005932469.1;locus_tag=NDY24_09690;product=zinc-binding dehydrogenase;protein_id=UUE99934.1;transl_table=11 CP098602.1 Genbank gene 2174868 2177546 . - . ID=gene-NDY24_09695;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=NDY24_09695 CP098602.1 Protein Homology CDS 2174868 2177546 . - 0 ID=cds-UUE99935.1;Parent=gene-NDY24_09695;Dbxref=NCBI_GP:UUE99935.1;Name=UUE99935.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374571.1;locus_tag=NDY24_09695;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=UUE99935.1;transl_table=11 CP098602.1 Genbank gene 2177546 2178520 . - . ID=gene-NDY24_09700;Name=NDY24_09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09700 CP098602.1 Protein Homology CDS 2177546 2178520 . - 0 ID=cds-UUE99936.1;Parent=gene-NDY24_09700;Dbxref=NCBI_GP:UUE99936.1;Name=UUE99936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377011.1;locus_tag=NDY24_09700;product=hypothetical protein;protein_id=UUE99936.1;transl_table=11 CP098602.1 Genbank gene 2178929 2179981 . + . ID=gene-NDY24_09705;Name=NDY24_09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09705 CP098602.1 Protein Homology CDS 2178929 2179981 . + 0 ID=cds-UUE99937.1;Parent=gene-NDY24_09705;Dbxref=NCBI_GP:UUE99937.1;Name=UUE99937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904027.1;locus_tag=NDY24_09705;product=LacI family transcriptional regulator;protein_id=UUE99937.1;transl_table=11 CP098602.1 Genbank gene 2180116 2183145 . + . ID=gene-NDY24_09710;Name=NDY24_09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09710 CP098602.1 Protein Homology CDS 2180116 2183145 . + 0 ID=cds-UUE99938.1;Parent=gene-NDY24_09710;Dbxref=NCBI_GP:UUE99938.1;Name=UUE99938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171975.1;locus_tag=NDY24_09710;product=TonB-dependent receptor;protein_id=UUE99938.1;transl_table=11 CP098602.1 Genbank gene 2183468 2186500 . + . ID=gene-NDY24_09715;Name=NDY24_09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09715 CP098602.1 Protein Homology CDS 2183468 2186500 . + 0 ID=cds-UUE99939.1;Parent=gene-NDY24_09715;Dbxref=NCBI_GP:UUE99939.1;Name=UUE99939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171731.1;locus_tag=NDY24_09715;product=TonB-dependent receptor;protein_id=UUE99939.1;transl_table=11 CP098602.1 Genbank gene 2186607 2188127 . + . ID=gene-NDY24_09720;Name=NDY24_09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09720 CP098602.1 Protein Homology CDS 2186607 2188127 . + 0 ID=cds-UUE99940.1;Parent=gene-NDY24_09720;Dbxref=NCBI_GP:UUE99940.1;Name=UUE99940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439666.1;locus_tag=NDY24_09720;product=tryptophan 7-halogenase;protein_id=UUE99940.1;transl_table=11 CP098602.1 Genbank gene 2188366 2189097 . - . ID=gene-NDY24_09725;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=NDY24_09725 CP098602.1 Protein Homology CDS 2188366 2189097 . - 0 ID=cds-UUE99941.1;Parent=gene-NDY24_09725;Dbxref=NCBI_GP:UUE99941.1;Name=UUE99941.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505335.1;locus_tag=NDY24_09725;product=orotidine-5'-phosphate decarboxylase;protein_id=UUE99941.1;transl_table=11 CP098602.1 Genbank gene 2189094 2190056 . - . ID=gene-NDY24_09730;Name=NDY24_09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09730 CP098602.1 Protein Homology CDS 2189094 2190056 . - 0 ID=cds-UUF00354.1;Parent=gene-NDY24_09730;Dbxref=NCBI_GP:UUF00354.1;Name=UUF00354.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159717.1;locus_tag=NDY24_09730;product=5'-nucleotidase%2C lipoprotein e(P4) family;protein_id=UUF00354.1;transl_table=11 CP098602.1 Genbank gene 2190184 2190852 . + . ID=gene-NDY24_09735;Name=NDY24_09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09735 CP098602.1 Protein Homology CDS 2190184 2190852 . + 0 ID=cds-UUE99942.1;Parent=gene-NDY24_09735;Dbxref=NCBI_GP:UUE99942.1;Name=UUE99942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374589.1;locus_tag=NDY24_09735;product=DUF480 domain-containing protein;protein_id=UUE99942.1;transl_table=11 CP098602.1 Genbank gene 2190987 2192021 . - . ID=gene-NDY24_09740;Name=NDY24_09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09740 CP098602.1 Protein Homology CDS 2190987 2192021 . - 0 ID=cds-UUE99943.1;Parent=gene-NDY24_09740;Dbxref=NCBI_GP:UUE99943.1;Name=UUE99943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155171.1;locus_tag=NDY24_09740;product=DUF4272 domain-containing protein;protein_id=UUE99943.1;transl_table=11 CP098602.1 Genbank gene 2192099 2192174 . + . ID=gene-NDY24_09745;Name=NDY24_09745;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_09745 CP098602.1 cmsearch ncRNA 2192099 2192174 . + . ID=rna-NDY24_09745;Parent=gene-NDY24_09745;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_09745;product=sX9 sRNA CP098602.1 cmsearch exon 2192099 2192174 . + . ID=exon-NDY24_09745-1;Parent=rna-NDY24_09745;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_09745;product=sX9 sRNA CP098602.1 Genbank gene 2192218 2192766 . - . ID=gene-NDY24_09750;Name=NDY24_09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09750 CP098602.1 Protein Homology CDS 2192218 2192766 . - 0 ID=cds-UUE99944.1;Parent=gene-NDY24_09750;Dbxref=NCBI_GP:UUE99944.1;Name=UUE99944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452670.1;locus_tag=NDY24_09750;product=GNAT family N-acetyltransferase;protein_id=UUE99944.1;transl_table=11 CP098602.1 Genbank gene 2192829 2194805 . - . ID=gene-NDY24_09755;Name=NDY24_09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09755 CP098602.1 Protein Homology CDS 2192829 2194805 . - 0 ID=cds-UUE99945.1;Parent=gene-NDY24_09755;Dbxref=NCBI_GP:UUE99945.1;Name=UUE99945.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091509.1;locus_tag=NDY24_09755;product=UvrD-helicase domain-containing protein;protein_id=UUE99945.1;transl_table=11 CP098602.1 Genbank gene 2194920 2195555 . + . ID=gene-NDY24_09760;Name=NDY24_09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09760 CP098602.1 Protein Homology CDS 2194920 2195555 . + 0 ID=cds-UUE99946.1;Parent=gene-NDY24_09760;Dbxref=NCBI_GP:UUE99946.1;Name=UUE99946.1;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452668.1;locus_tag=NDY24_09760;product=thymidine kinase;protein_id=UUE99946.1;transl_table=11 CP098602.1 Genbank gene 2196021 2197265 . + . ID=gene-NDY24_09765;Name=NDY24_09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09765 CP098602.1 Protein Homology CDS 2196021 2197265 . + 0 ID=cds-UUE99947.1;Parent=gene-NDY24_09765;Dbxref=NCBI_GP:UUE99947.1;Name=UUE99947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155166.1;locus_tag=NDY24_09765;product=GAF domain-containing sensor histidine kinase;protein_id=UUE99947.1;transl_table=11 CP098602.1 Genbank gene 2197422 2199023 . - . ID=gene-NDY24_09770;Name=NDY24_09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09770 CP098602.1 Protein Homology CDS 2197422 2199023 . - 0 ID=cds-UUE99948.1;Parent=gene-NDY24_09770;Dbxref=NCBI_GP:UUE99948.1;Name=UUE99948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091511.1;locus_tag=NDY24_09770;product=glucan biosynthesis protein D;protein_id=UUE99948.1;transl_table=11 CP098602.1 Genbank pseudogene 2199094 2200194 . - . ID=gene-NDY24_09775;Name=NDY24_09775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_09775;pseudo=true CP098602.1 Protein Homology CDS 2199094 2200194 . - 0 ID=cds-NDY24_09775;Parent=gene-NDY24_09775;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407293.1;locus_tag=NDY24_09775;product=DUF4380 domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2200379 2201194 . - . ID=gene-NDY24_09780;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=NDY24_09780 CP098602.1 Protein Homology CDS 2200379 2201194 . - 0 ID=cds-UUE99949.1;Parent=gene-NDY24_09780;Dbxref=NCBI_GP:UUE99949.1;Name=UUE99949.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439681.1;locus_tag=NDY24_09780;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=UUE99949.1;transl_table=11 CP098602.1 Genbank gene 2201123 2201479 . + . ID=gene-NDY24_09785;Name=NDY24_09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09785 CP098602.1 GeneMarkS-2+ CDS 2201123 2201479 . + 0 ID=cds-UUE99950.1;Parent=gene-NDY24_09785;Dbxref=NCBI_GP:UUE99950.1;Name=UUE99950.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_09785;product=hypothetical protein;protein_id=UUE99950.1;transl_table=11 CP098602.1 Genbank gene 2201495 2201609 . - . ID=gene-NDY24_09790;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NDY24_09790 CP098602.1 cmsearch rRNA 2201495 2201609 . - . ID=rna-NDY24_09790;Parent=gene-NDY24_09790;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_09790;product=5S ribosomal RNA CP098602.1 cmsearch exon 2201495 2201609 . - . ID=exon-NDY24_09790-1;Parent=rna-NDY24_09790;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_09790;product=5S ribosomal RNA CP098602.1 Genbank gene 2201783 2204665 . - . ID=gene-NDY24_09795;Name=NDY24_09795;gbkey=Gene;gene_biotype=rRNA;locus_tag=NDY24_09795 CP098602.1 cmsearch rRNA 2201783 2204665 . - . ID=rna-NDY24_09795;Parent=gene-NDY24_09795;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_09795;product=23S ribosomal RNA CP098602.1 cmsearch exon 2201783 2204665 . - . ID=exon-NDY24_09795-1;Parent=rna-NDY24_09795;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_09795;product=23S ribosomal RNA CP098602.1 Genbank gene 2204894 2204970 . - . ID=gene-NDY24_09800;Name=NDY24_09800;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_09800 CP098602.1 tRNAscan-SE tRNA 2204894 2204970 . - . ID=rna-NDY24_09800;Parent=gene-NDY24_09800;anticodon=(pos:complement(2204934..2204936));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_09800;product=tRNA-Ile CP098602.1 tRNAscan-SE exon 2204894 2204970 . - . ID=exon-NDY24_09800-1;Parent=rna-NDY24_09800;anticodon=(pos:complement(2204934..2204936));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_09800;product=tRNA-Ile CP098602.1 Genbank gene 2204990 2205065 . - . ID=gene-NDY24_09805;Name=NDY24_09805;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_09805 CP098602.1 tRNAscan-SE tRNA 2204990 2205065 . - . ID=rna-NDY24_09805;Parent=gene-NDY24_09805;anticodon=(pos:complement(2205030..2205032));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_09805;product=tRNA-Ala CP098602.1 tRNAscan-SE exon 2204990 2205065 . - . ID=exon-NDY24_09805-1;Parent=rna-NDY24_09805;anticodon=(pos:complement(2205030..2205032));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_09805;product=tRNA-Ala CP098602.1 Genbank gene 2205158 2206704 . - . ID=gene-NDY24_09810;Name=NDY24_09810;gbkey=Gene;gene_biotype=rRNA;locus_tag=NDY24_09810 CP098602.1 cmsearch rRNA 2205158 2206704 . - . ID=rna-NDY24_09810;Parent=gene-NDY24_09810;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_09810;product=16S ribosomal RNA CP098602.1 cmsearch exon 2205158 2206704 . - . ID=exon-NDY24_09810-1;Parent=rna-NDY24_09810;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_09810;product=16S ribosomal RNA CP098602.1 Genbank gene 2207470 2208645 . + . ID=gene-NDY24_09815;Name=NDY24_09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09815 CP098602.1 Protein Homology CDS 2207470 2208645 . + 0 ID=cds-UUE99951.1;Parent=gene-NDY24_09815;Dbxref=NCBI_GP:UUE99951.1;Name=UUE99951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904738.1;locus_tag=NDY24_09815;product=benzoate/H(+) symporter BenE family transporter;protein_id=UUE99951.1;transl_table=11 CP098602.1 Genbank gene 2208784 2210688 . - . ID=gene-NDY24_09820;Name=NDY24_09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09820 CP098602.1 Protein Homology CDS 2208784 2210688 . - 0 ID=cds-UUE99952.1;Parent=gene-NDY24_09820;Dbxref=NCBI_GP:UUE99952.1;Name=UUE99952.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501448.1;locus_tag=NDY24_09820;product=GAF domain-containing protein;protein_id=UUE99952.1;transl_table=11 CP098602.1 Genbank pseudogene 2210685 2211279 . - . ID=gene-NDY24_09825;Name=NDY24_09825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_09825;pseudo=true CP098602.1 Protein Homology CDS 2210685 2211279 . - 0 ID=cds-NDY24_09825;Parent=gene-NDY24_09825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154757.1;locus_tag=NDY24_09825;product=biliverdin-producing heme oxygenase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2211379 2212650 . - . ID=gene-NDY24_09830;Name=NDY24_09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09830 CP098602.1 Protein Homology CDS 2211379 2212650 . - 0 ID=cds-UUE99953.1;Parent=gene-NDY24_09830;Dbxref=NCBI_GP:UUE99953.1;Name=UUE99953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448497.1;locus_tag=NDY24_09830;product=TCR/Tet family MFS transporter;protein_id=UUE99953.1;transl_table=11 CP098602.1 Genbank pseudogene 2213034 2215202 . - . ID=gene-NDY24_09835;Name=NDY24_09835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_09835;pseudo=true CP098602.1 Protein Homology CDS 2213034 2215202 . - 0 ID=cds-NDY24_09835;Parent=gene-NDY24_09835;Note=frameshifted;Ontology_term=GO:0009253,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509591.1;locus_tag=NDY24_09835;product=lytic murein transglycosylase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2215514 2215720 . - . ID=gene-NDY24_09840;Name=NDY24_09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09840 CP098602.1 Protein Homology CDS 2215514 2215720 . - 0 ID=cds-UUE99954.1;Parent=gene-NDY24_09840;Dbxref=NCBI_GP:UUE99954.1;Name=UUE99954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154992.1;locus_tag=NDY24_09840;product=hypothetical protein;protein_id=UUE99954.1;transl_table=11 CP098602.1 Genbank gene 2215881 2216270 . - . ID=gene-NDY24_09845;Name=NDY24_09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09845 CP098602.1 Protein Homology CDS 2215881 2216270 . - 0 ID=cds-UUE99955.1;Parent=gene-NDY24_09845;Dbxref=NCBI_GP:UUE99955.1;Name=UUE99955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011039223.1;locus_tag=NDY24_09845;product=YchJ family metal-binding protein;protein_id=UUE99955.1;transl_table=11 CP098602.1 Genbank gene 2216385 2217158 . + . ID=gene-NDY24_09850;Name=NDY24_09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09850 CP098602.1 Protein Homology CDS 2216385 2217158 . + 0 ID=cds-UUE99956.1;Parent=gene-NDY24_09850;Dbxref=NCBI_GP:UUE99956.1;Name=UUE99956.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017909694.1;locus_tag=NDY24_09850;product=TSUP family transporter;protein_id=UUE99956.1;transl_table=11 CP098602.1 Genbank pseudogene 2217505 2218425 . + . ID=gene-NDY24_09855;Name=NDY24_09855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_09855;pseudo=true CP098602.1 Protein Homology CDS 2217505 2218425 . + 0 ID=cds-NDY24_09855;Parent=gene-NDY24_09855;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012509957.1;locus_tag=NDY24_09855;product=IS110 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2218660 2220720 . - . ID=gene-NDY24_09860;Name=NDY24_09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09860 CP098602.1 Protein Homology CDS 2218660 2220720 . - 0 ID=cds-UUE99957.1;Parent=gene-NDY24_09860;Dbxref=NCBI_GP:UUE99957.1;Name=UUE99957.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011270106.1;locus_tag=NDY24_09860;product=TonB-dependent siderophore receptor;protein_id=UUE99957.1;transl_table=11 CP098602.1 Genbank gene 2220968 2222149 . - . ID=gene-NDY24_09865;Name=NDY24_09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09865 CP098602.1 Protein Homology CDS 2220968 2222149 . - 0 ID=cds-UUE99958.1;Parent=gene-NDY24_09865;Dbxref=NCBI_GP:UUE99958.1;Name=UUE99958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452464.1;locus_tag=NDY24_09865;product=DUF2220 family protein;protein_id=UUE99958.1;transl_table=11 CP098602.1 Genbank gene 2222154 2225546 . - . ID=gene-NDY24_09870;Name=NDY24_09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09870 CP098602.1 Protein Homology CDS 2222154 2225546 . - 0 ID=cds-UUE99959.1;Parent=gene-NDY24_09870;Dbxref=NCBI_GP:UUE99959.1;Name=UUE99959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452465.1;locus_tag=NDY24_09870;product=ATP-binding protein;protein_id=UUE99959.1;transl_table=11 CP098602.1 Genbank gene 2225611 2226315 . - . ID=gene-NDY24_09875;Name=NDY24_09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09875 CP098602.1 Protein Homology CDS 2225611 2226315 . - 0 ID=cds-UUE99960.1;Parent=gene-NDY24_09875;Dbxref=NCBI_GP:UUE99960.1;Name=UUE99960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003476901.1;locus_tag=NDY24_09875;product=DUF4194 domain-containing protein;protein_id=UUE99960.1;transl_table=11 CP098602.1 Genbank gene 2226302 2227771 . - . ID=gene-NDY24_09880;Name=NDY24_09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09880 CP098602.1 Protein Homology CDS 2226302 2227771 . - 0 ID=cds-UUE99961.1;Parent=gene-NDY24_09880;Dbxref=NCBI_GP:UUE99961.1;Name=UUE99961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004141298.1;locus_tag=NDY24_09880;product=DUF3375 domain-containing protein;protein_id=UUE99961.1;transl_table=11 CP098602.1 Genbank gene 2227945 2228547 . - . ID=gene-NDY24_09885;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=NDY24_09885 CP098602.1 Protein Homology CDS 2227945 2228547 . - 0 ID=cds-UUE99962.1;Parent=gene-NDY24_09885;Dbxref=NCBI_GP:UUE99962.1;Name=UUE99962.1;Ontology_term=GO:0042559,GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=pteridine-containing compound biosynthetic process|0042559||IEA,tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158364.1;locus_tag=NDY24_09885;product=GTP cyclohydrolase I FolE;protein_id=UUE99962.1;transl_table=11 CP098602.1 Genbank gene 2228678 2229133 . + . ID=gene-NDY24_09890;Name=NDY24_09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09890 CP098602.1 Protein Homology CDS 2228678 2229133 . + 0 ID=cds-UUE99963.1;Parent=gene-NDY24_09890;Dbxref=NCBI_GP:UUE99963.1;Name=UUE99963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452469.1;locus_tag=NDY24_09890;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=UUE99963.1;transl_table=11 CP098602.1 Genbank gene 2229228 2229437 . + . ID=gene-NDY24_09895;Name=NDY24_09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09895 CP098602.1 Protein Homology CDS 2229228 2229437 . + 0 ID=cds-UUE99964.1;Parent=gene-NDY24_09895;Dbxref=NCBI_GP:UUE99964.1;Name=UUE99964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364281.1;locus_tag=NDY24_09895;product=DUF1656 domain-containing protein;protein_id=UUE99964.1;transl_table=11 CP098602.1 Genbank gene 2229434 2230357 . + . ID=gene-NDY24_09900;Name=NDY24_09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09900 CP098602.1 Protein Homology CDS 2229434 2230357 . + 0 ID=cds-UUE99965.1;Parent=gene-NDY24_09900;Dbxref=NCBI_GP:UUE99965.1;Name=UUE99965.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091523.1;locus_tag=NDY24_09900;product=efflux RND transporter periplasmic adaptor subunit;protein_id=UUE99965.1;transl_table=11 CP098602.1 Genbank gene 2230354 2231814 . + . ID=gene-NDY24_09905;Name=NDY24_09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09905 CP098602.1 Protein Homology CDS 2230354 2231814 . + 0 ID=cds-UUE99966.1;Parent=gene-NDY24_09905;Dbxref=NCBI_GP:UUE99966.1;Name=UUE99966.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452472.1;locus_tag=NDY24_09905;product=efflux transporter outer membrane subunit;protein_id=UUE99966.1;transl_table=11 CP098602.1 Genbank gene 2231811 2234234 . + . ID=gene-NDY24_09910;Name=NDY24_09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09910 CP098602.1 Protein Homology CDS 2231811 2234234 . + 0 ID=cds-UUE99967.1;Parent=gene-NDY24_09910;Dbxref=NCBI_GP:UUE99967.1;Name=UUE99967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452473.1;locus_tag=NDY24_09910;product=FUSC family protein;protein_id=UUE99967.1;transl_table=11 CP098602.1 Genbank gene 2234440 2235801 . - . ID=gene-NDY24_09915;Name=NDY24_09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09915 CP098602.1 Protein Homology CDS 2234440 2235801 . - 0 ID=cds-UUE99968.1;Parent=gene-NDY24_09915;Dbxref=NCBI_GP:UUE99968.1;Name=UUE99968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301716.1;locus_tag=NDY24_09915;product=MFS transporter;protein_id=UUE99968.1;transl_table=11 CP098602.1 Genbank gene 2235962 2236180 . - . ID=gene-NDY24_09920;Name=NDY24_09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09920 CP098602.1 GeneMarkS-2+ CDS 2235962 2236180 . - 0 ID=cds-UUE99969.1;Parent=gene-NDY24_09920;Dbxref=NCBI_GP:UUE99969.1;Name=UUE99969.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_09920;product=hypothetical protein;protein_id=UUE99969.1;transl_table=11 CP098602.1 Genbank pseudogene 2236158 2237423 . + . ID=gene-NDY24_09925;Name=NDY24_09925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_09925;pseudo=true CP098602.1 Protein Homology CDS 2236158 2237423 . + 0 ID=cds-NDY24_09925;Parent=gene-NDY24_09925;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019238145.1;locus_tag=NDY24_09925;product=phospholipase D-like domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2237486 2237992 . - . ID=gene-NDY24_09930;Name=NDY24_09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09930 CP098602.1 Protein Homology CDS 2237486 2237992 . - 0 ID=cds-UUE99970.1;Parent=gene-NDY24_09930;Dbxref=NCBI_GP:UUE99970.1;Name=UUE99970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409841.1;locus_tag=NDY24_09930;product=hypothetical protein;protein_id=UUE99970.1;transl_table=11 CP098602.1 Genbank gene 2238273 2238479 . + . ID=gene-NDY24_09935;Name=NDY24_09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09935 CP098602.1 Protein Homology CDS 2238273 2238479 . + 0 ID=cds-UUE99971.1;Parent=gene-NDY24_09935;Dbxref=NCBI_GP:UUE99971.1;Name=UUE99971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364297.1;locus_tag=NDY24_09935;product=hypothetical protein;protein_id=UUE99971.1;transl_table=11 CP098602.1 Genbank gene 2238466 2239578 . + . ID=gene-NDY24_09940;Name=NDY24_09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09940 CP098602.1 Protein Homology CDS 2238466 2239578 . + 0 ID=cds-UUE99972.1;Parent=gene-NDY24_09940;Dbxref=NCBI_GP:UUE99972.1;Name=UUE99972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158361.1;locus_tag=NDY24_09940;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=UUE99972.1;transl_table=11 CP098602.1 Genbank gene 2239756 2240316 . - . ID=gene-NDY24_09945;Name=NDY24_09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09945 CP098602.1 Protein Homology CDS 2239756 2240316 . - 0 ID=cds-UUE99973.1;Parent=gene-NDY24_09945;Dbxref=NCBI_GP:UUE99973.1;Name=UUE99973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448387.1;locus_tag=NDY24_09945;product=hypothetical protein;protein_id=UUE99973.1;transl_table=11 CP098602.1 Genbank gene 2240706 2241089 . + . ID=gene-NDY24_09950;Name=NDY24_09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09950 CP098602.1 Protein Homology CDS 2240706 2241089 . + 0 ID=cds-UUE99974.1;Parent=gene-NDY24_09950;Dbxref=NCBI_GP:UUE99974.1;Name=UUE99974.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039755.1;locus_tag=NDY24_09950;product=DUF6393 family protein;protein_id=UUE99974.1;transl_table=11 CP098602.1 Genbank gene 2241355 2242932 . + . ID=gene-NDY24_09955;Name=NDY24_09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09955 CP098602.1 Protein Homology CDS 2241355 2242932 . + 0 ID=cds-UUE99975.1;Parent=gene-NDY24_09955;Dbxref=NCBI_GP:UUE99975.1;Name=UUE99975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902156.1;locus_tag=NDY24_09955;product=alpha/beta hydrolase-fold protein;protein_id=UUE99975.1;transl_table=11 CP098602.1 Genbank gene 2243015 2243416 . - . ID=gene-NDY24_09960;Name=NDY24_09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09960 CP098602.1 Protein Homology CDS 2243015 2243416 . - 0 ID=cds-UUE99976.1;Parent=gene-NDY24_09960;Dbxref=NCBI_GP:UUE99976.1;Name=UUE99976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004429277.1;locus_tag=NDY24_09960;product=DUF2384 domain-containing protein;protein_id=UUE99976.1;transl_table=11 CP098602.1 Genbank gene 2243722 2244177 . + . ID=gene-NDY24_09965;Name=NDY24_09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09965 CP098602.1 Protein Homology CDS 2243722 2244177 . + 0 ID=cds-UUE99977.1;Parent=gene-NDY24_09965;Dbxref=NCBI_GP:UUE99977.1;Name=UUE99977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509621.1;locus_tag=NDY24_09965;product=hypothetical protein;protein_id=UUE99977.1;transl_table=11 CP098602.1 Genbank gene 2244482 2245141 . + . ID=gene-NDY24_09970;Name=NDY24_09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09970 CP098602.1 GeneMarkS-2+ CDS 2244482 2245141 . + 0 ID=cds-UUE99978.1;Parent=gene-NDY24_09970;Dbxref=NCBI_GP:UUE99978.1;Name=UUE99978.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_09970;product=hypothetical protein;protein_id=UUE99978.1;transl_table=11 CP098602.1 Genbank gene 2245295 2245684 . - . ID=gene-NDY24_09975;Name=NDY24_09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09975 CP098602.1 GeneMarkS-2+ CDS 2245295 2245684 . - 0 ID=cds-UUE99979.1;Parent=gene-NDY24_09975;Dbxref=NCBI_GP:UUE99979.1;Name=UUE99979.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_09975;product=hypothetical protein;protein_id=UUE99979.1;transl_table=11 CP098602.1 Genbank gene 2246557 2246850 . - . ID=gene-NDY24_09980;Name=NDY24_09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09980 CP098602.1 Protein Homology CDS 2246557 2246850 . - 0 ID=cds-UUE99980.1;Parent=gene-NDY24_09980;Dbxref=NCBI_GP:UUE99980.1;Name=UUE99980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509624.1;locus_tag=NDY24_09980;product=hypothetical protein;protein_id=UUE99980.1;transl_table=11 CP098602.1 Genbank gene 2246962 2247207 . + . ID=gene-NDY24_09985;Name=NDY24_09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09985 CP098602.1 Protein Homology CDS 2246962 2247207 . + 0 ID=cds-UUE99981.1;Parent=gene-NDY24_09985;Dbxref=NCBI_GP:UUE99981.1;Name=UUE99981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112444.1;locus_tag=NDY24_09985;product=helix-turn-helix transcriptional regulator;protein_id=UUE99981.1;transl_table=11 CP098602.1 Genbank pseudogene 2247234 2248138 . - . ID=gene-NDY24_09990;Name=NDY24_09990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_09990;pseudo=true CP098602.1 Protein Homology CDS 2247234 2248138 . - 0 ID=cds-NDY24_09990;Parent=gene-NDY24_09990;Note=frameshifted;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011039253.1;locus_tag=NDY24_09990;product=pseudouridine synthase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2248505 2249224 . + . ID=gene-NDY24_09995;Name=NDY24_09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_09995 CP098602.1 Protein Homology CDS 2248505 2249224 . + 0 ID=cds-UUE99982.1;Parent=gene-NDY24_09995;Dbxref=NCBI_GP:UUE99982.1;Name=UUE99982.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016362.2;locus_tag=NDY24_09995;product=restriction endonuclease;protein_id=UUE99982.1;transl_table=11 CP098602.1 Genbank pseudogene 2250069 2251202 . - . ID=gene-NDY24_10000;Name=NDY24_10000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_10000;pseudo=true CP098602.1 Protein Homology CDS 2250069 2251202 . - 0 ID=cds-NDY24_10000;Parent=gene-NDY24_10000;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611839.1;locus_tag=NDY24_10000;product=IS3 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2253529 2253750 . - . ID=gene-NDY24_10005;Name=NDY24_10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10005 CP098602.1 GeneMarkS-2+ CDS 2253529 2253750 . - 0 ID=cds-UUE99983.1;Parent=gene-NDY24_10005;Dbxref=NCBI_GP:UUE99983.1;Name=UUE99983.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_10005;product=hypothetical protein;protein_id=UUE99983.1;transl_table=11 CP098602.1 Genbank gene 2253747 2253914 . - . ID=gene-NDY24_10010;Name=NDY24_10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10010 CP098602.1 GeneMarkS-2+ CDS 2253747 2253914 . - 0 ID=cds-UUE99984.1;Parent=gene-NDY24_10010;Dbxref=NCBI_GP:UUE99984.1;Name=UUE99984.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_10010;product=hypothetical protein;protein_id=UUE99984.1;transl_table=11 CP098602.1 Genbank gene 2254265 2254597 . + . ID=gene-NDY24_10015;Name=NDY24_10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10015 CP098602.1 Protein Homology CDS 2254265 2254597 . + 0 ID=cds-UUE99985.1;Parent=gene-NDY24_10015;Dbxref=NCBI_GP:UUE99985.1;Name=UUE99985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302538.1;locus_tag=NDY24_10015;product=hypothetical protein;protein_id=UUE99985.1;transl_table=11 CP098602.1 Genbank gene 2254713 2255540 . - . ID=gene-NDY24_10020;Name=NDY24_10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10020 CP098602.1 Protein Homology CDS 2254713 2255540 . - 0 ID=cds-UUE99986.1;Parent=gene-NDY24_10020;Dbxref=NCBI_GP:UUE99986.1;Name=UUE99986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113717.1;locus_tag=NDY24_10020;product=hypothetical protein;protein_id=UUE99986.1;transl_table=11 CP098602.1 Genbank gene 2255488 2255868 . - . ID=gene-NDY24_10025;Name=NDY24_10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10025 CP098602.1 GeneMarkS-2+ CDS 2255488 2255868 . - 0 ID=cds-UUE99987.1;Parent=gene-NDY24_10025;Dbxref=NCBI_GP:UUE99987.1;Name=UUE99987.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_10025;product=hypothetical protein;protein_id=UUE99987.1;transl_table=11 CP098602.1 Genbank gene 2255903 2256310 . - . ID=gene-NDY24_10030;Name=NDY24_10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10030 CP098602.1 Protein Homology CDS 2255903 2256310 . - 0 ID=cds-UUE99988.1;Parent=gene-NDY24_10030;Dbxref=NCBI_GP:UUE99988.1;Name=UUE99988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376368.1;locus_tag=NDY24_10030;product=hypothetical protein;protein_id=UUE99988.1;transl_table=11 CP098602.1 Genbank pseudogene 2256723 2256913 . + . ID=gene-NDY24_10035;Name=NDY24_10035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_10035;pseudo=true CP098602.1 Protein Homology CDS 2256723 2256913 . + 0 ID=cds-NDY24_10035;Parent=gene-NDY24_10035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509633.1;locus_tag=NDY24_10035;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2257187 2258005 . - . ID=gene-NDY24_10040;Name=NDY24_10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10040 CP098602.1 Protein Homology CDS 2257187 2258005 . - 0 ID=cds-UUF00355.1;Parent=gene-NDY24_10040;Dbxref=NCBI_GP:UUF00355.1;Name=UUF00355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158347.1;locus_tag=NDY24_10040;product=AraC family transcriptional regulator;protein_id=UUF00355.1;transl_table=11 CP098602.1 Genbank gene 2258224 2258967 . + . ID=gene-NDY24_10045;Name=NDY24_10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10045 CP098602.1 Protein Homology CDS 2258224 2258967 . + 0 ID=cds-UUE99989.1;Parent=gene-NDY24_10045;Dbxref=NCBI_GP:UUE99989.1;Name=UUE99989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158348.1;locus_tag=NDY24_10045;product=SDR family oxidoreductase;protein_id=UUE99989.1;transl_table=11 CP098602.1 Genbank gene 2259090 2259320 . - . ID=gene-NDY24_10050;Name=NDY24_10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10050 CP098602.1 Protein Homology CDS 2259090 2259320 . - 0 ID=cds-UUE99990.1;Parent=gene-NDY24_10050;Dbxref=NCBI_GP:UUE99990.1;Name=UUE99990.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014404295.1;locus_tag=NDY24_10050;product=HigA family addiction module antitoxin;protein_id=UUE99990.1;transl_table=11 CP098602.1 Genbank gene 2259398 2259679 . - . ID=gene-NDY24_10055;Name=NDY24_10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10055 CP098602.1 Protein Homology CDS 2259398 2259679 . - 0 ID=cds-UUE99991.1;Parent=gene-NDY24_10055;Dbxref=NCBI_GP:UUE99991.1;Name=UUE99991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010952670.1;locus_tag=NDY24_10055;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=UUE99991.1;transl_table=11 CP098602.1 Genbank gene 2259893 2260948 . - . ID=gene-NDY24_10060;Name=NDY24_10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10060 CP098602.1 Protein Homology CDS 2259893 2260948 . - 0 ID=cds-UUE99992.1;Parent=gene-NDY24_10060;Dbxref=NCBI_GP:UUE99992.1;Name=UUE99992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449987.1;locus_tag=NDY24_10060;product=virulence RhuM family protein;protein_id=UUE99992.1;transl_table=11 CP098602.1 Genbank pseudogene 2261087 2263496 . - . ID=gene-NDY24_10065;Name=recD;gbkey=Gene;gene=recD;gene_biotype=pseudogene;locus_tag=NDY24_10065;pseudo=true CP098602.1 Protein Homology CDS 2261087 2263496 . - 0 ID=cds-NDY24_10065;Parent=gene-NDY24_10065;Note=frameshifted;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482323.1;locus_tag=NDY24_10065;product=exodeoxyribonuclease V subunit alpha;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2263493 2267602 . - . ID=gene-NDY24_10070;Name=NDY24_10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10070 CP098602.1 Protein Homology CDS 2263493 2267602 . - 0 ID=cds-UUE99993.1;Parent=gene-NDY24_10070;Dbxref=NCBI_GP:UUE99993.1;Name=UUE99993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112939.1;locus_tag=NDY24_10070;product=exodeoxyribonuclease V subunit beta;protein_id=UUE99993.1;transl_table=11 CP098602.1 Genbank pseudogene 2267599 2271000 . - . ID=gene-NDY24_10075;Name=recC;gbkey=Gene;gene=recC;gene_biotype=pseudogene;locus_tag=NDY24_10075;pseudo=true CP098602.1 Protein Homology CDS 2267599 2271000 . - 0 ID=cds-NDY24_10075;Parent=gene-NDY24_10075;Note=frameshifted%3B internal stop;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017164976.1;locus_tag=NDY24_10075;product=exodeoxyribonuclease V subunit gamma;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 2271155 2276377 . - . ID=gene-NDY24_10080;Name=NDY24_10080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_10080;pseudo=true CP098602.1 Protein Homology CDS 2271155 2276377 . - 0 ID=cds-NDY24_10080;Parent=gene-NDY24_10080;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439712.1;locus_tag=NDY24_10080;product=putative Ig domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 2276655 2277182 . + . ID=gene-NDY24_10085;Name=NDY24_10085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_10085;pseudo=true CP098602.1 Protein Homology CDS 2276655 2277182 . + 0 ID=cds-NDY24_10085;Parent=gene-NDY24_10085;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364925.1;locus_tag=NDY24_10085;product=tail fiber protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2277265 2277792 . + . ID=gene-NDY24_10090;Name=NDY24_10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10090 CP098602.1 Protein Homology CDS 2277265 2277792 . + 0 ID=cds-UUE99994.1;Parent=gene-NDY24_10090;Dbxref=NCBI_GP:UUE99994.1;Name=UUE99994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010341084.1;locus_tag=NDY24_10090;product=tail fiber protein;protein_id=UUE99994.1;transl_table=11 CP098602.1 Genbank gene 2277853 2278389 . + . ID=gene-NDY24_10095;Name=NDY24_10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10095 CP098602.1 Protein Homology CDS 2277853 2278389 . + 0 ID=cds-UUE99995.1;Parent=gene-NDY24_10095;Dbxref=NCBI_GP:UUE99995.1;Name=UUE99995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364922.1;locus_tag=NDY24_10095;product=tail fiber protein;protein_id=UUE99995.1;transl_table=11 CP098602.1 Genbank pseudogene 2278404 2278966 . + . ID=gene-NDY24_10100;Name=NDY24_10100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_10100;pseudo=true CP098602.1 Protein Homology CDS 2278404 2278966 . + 0 ID=cds-NDY24_10100;Parent=gene-NDY24_10100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156017.1;locus_tag=NDY24_10100;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2278959 2279246 . - . ID=gene-NDY24_10105;Name=NDY24_10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10105 CP098602.1 Protein Homology CDS 2278959 2279246 . - 0 ID=cds-UUE99996.1;Parent=gene-NDY24_10105;Dbxref=NCBI_GP:UUE99996.1;Name=UUE99996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364918.1;locus_tag=NDY24_10105;product=hypothetical protein;protein_id=UUE99996.1;transl_table=11 CP098602.1 Genbank gene 2279482 2280276 . + . ID=gene-NDY24_10110;Name=NDY24_10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10110 CP098602.1 Protein Homology CDS 2279482 2280276 . + 0 ID=cds-UUE99997.1;Parent=gene-NDY24_10110;Dbxref=NCBI_GP:UUE99997.1;Name=UUE99997.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451570.1;locus_tag=NDY24_10110;product=ATP-binding cassette domain-containing protein;protein_id=UUE99997.1;transl_table=11 CP098602.1 Genbank gene 2280276 2281025 . + . ID=gene-NDY24_10115;Name=NDY24_10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10115 CP098602.1 Protein Homology CDS 2280276 2281025 . + 0 ID=cds-UUE99998.1;Parent=gene-NDY24_10115;Dbxref=NCBI_GP:UUE99998.1;Name=UUE99998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302478.1;locus_tag=NDY24_10115;product=MlaE family lipid ABC transporter permease subunit;protein_id=UUE99998.1;transl_table=11 CP098602.1 Genbank gene 2281037 2281588 . + . ID=gene-NDY24_10120;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=NDY24_10120 CP098602.1 Protein Homology CDS 2281037 2281588 . + 0 ID=cds-UUE99999.1;Parent=gene-NDY24_10120;Dbxref=NCBI_GP:UUE99999.1;Name=UUE99999.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451568.1;locus_tag=NDY24_10120;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=UUE99999.1;transl_table=11 CP098602.1 Genbank gene 2281585 2282247 . + . ID=gene-NDY24_10125;Name=NDY24_10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10125 CP098602.1 Protein Homology CDS 2281585 2282247 . + 0 ID=cds-UUF00001.1;Parent=gene-NDY24_10125;Dbxref=NCBI_GP:UUF00001.1;Name=UUF00001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002803917.1;locus_tag=NDY24_10125;product=ABC transporter substrate-binding protein;protein_id=UUF00001.1;transl_table=11 CP098602.1 Genbank gene 2282237 2282530 . + . ID=gene-NDY24_10130;Name=NDY24_10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10130 CP098602.1 Protein Homology CDS 2282237 2282530 . + 0 ID=cds-UUF00002.1;Parent=gene-NDY24_10130;Dbxref=NCBI_GP:UUF00002.1;Name=UUF00002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364907.1;locus_tag=NDY24_10130;product=STAS domain-containing protein;protein_id=UUF00002.1;transl_table=11 CP098602.1 Genbank gene 2282541 2283602 . + . ID=gene-NDY24_10135;Name=NDY24_10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10135 CP098602.1 Protein Homology CDS 2282541 2283602 . + 0 ID=cds-UUF00003.1;Parent=gene-NDY24_10135;Dbxref=NCBI_GP:UUF00003.1;Name=UUF00003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163758.1;locus_tag=NDY24_10135;product=VacJ family lipoprotein;protein_id=UUF00003.1;transl_table=11 CP098602.1 Genbank gene 2283906 2284859 . + . ID=gene-NDY24_10140;Name=NDY24_10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10140 CP098602.1 Protein Homology CDS 2283906 2284859 . + 0 ID=cds-UUF00004.1;Parent=gene-NDY24_10140;Dbxref=NCBI_GP:UUF00004.1;Name=UUF00004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451564.1;locus_tag=NDY24_10140;product=AraC family transcriptional regulator;protein_id=UUF00004.1;transl_table=11 CP098602.1 Genbank gene 2285112 2286725 . + . ID=gene-NDY24_10145;Name=NDY24_10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10145 CP098602.1 Protein Homology CDS 2285112 2286725 . + 0 ID=cds-UUF00005.1;Parent=gene-NDY24_10145;Dbxref=NCBI_GP:UUF00005.1;Name=UUF00005.1;Ontology_term=GO:0016614,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451563.1;locus_tag=NDY24_10145;product=GMC family oxidoreductase N-terminal domain-containing protein;protein_id=UUF00005.1;transl_table=11 CP098602.1 Genbank gene 2286880 2287299 . - . ID=gene-NDY24_10150;Name=NDY24_10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10150 CP098602.1 Protein Homology CDS 2286880 2287299 . - 0 ID=cds-UUF00006.1;Parent=gene-NDY24_10150;Dbxref=NCBI_GP:UUF00006.1;Name=UUF00006.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018684.2;locus_tag=NDY24_10150;product=DUF1311 domain-containing protein;protein_id=UUF00006.1;transl_table=11 CP098602.1 Genbank gene 2287410 2287958 . - . ID=gene-NDY24_10155;Name=NDY24_10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10155 CP098602.1 Protein Homology CDS 2287410 2287958 . - 0 ID=cds-UUF00007.1;Parent=gene-NDY24_10155;Dbxref=NCBI_GP:UUF00007.1;Name=UUF00007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902115.1;locus_tag=NDY24_10155;product=glutathione peroxidase;protein_id=UUF00007.1;transl_table=11 CP098602.1 Genbank gene 2288176 2288556 . - . ID=gene-NDY24_10160;Name=NDY24_10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10160 CP098602.1 Protein Homology CDS 2288176 2288556 . - 0 ID=cds-UUF00008.1;Parent=gene-NDY24_10160;Dbxref=NCBI_GP:UUF00008.1;Name=UUF00008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349194.1;locus_tag=NDY24_10160;product=hypothetical protein;protein_id=UUF00008.1;transl_table=11 CP098602.1 Genbank gene 2288799 2290385 . - . ID=gene-NDY24_10165;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=NDY24_10165 CP098602.1 Protein Homology CDS 2288799 2290385 . - 0 ID=cds-UUF00009.1;Parent=gene-NDY24_10165;Dbxref=NCBI_GP:UUF00009.1;Name=UUF00009.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011039276.1;locus_tag=NDY24_10165;product=DNA recombination protein RmuC;protein_id=UUF00009.1;transl_table=11 CP098602.1 Genbank gene 2290741 2291364 . + . ID=gene-NDY24_10170;Name=NDY24_10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10170 CP098602.1 Protein Homology CDS 2290741 2291364 . + 0 ID=cds-UUF00010.1;Parent=gene-NDY24_10170;Dbxref=NCBI_GP:UUF00010.1;Name=UUF00010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012481678.1;locus_tag=NDY24_10170;product=glutathione S-transferase;protein_id=UUF00010.1;transl_table=11 CP098602.1 Genbank gene 2291699 2293114 . + . ID=gene-NDY24_10175;Name=NDY24_10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10175 CP098602.1 Protein Homology CDS 2291699 2293114 . + 0 ID=cds-UUF00011.1;Parent=gene-NDY24_10175;Dbxref=NCBI_GP:UUF00011.1;Name=UUF00011.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482277.1;locus_tag=NDY24_10175;product=amino acid permease;protein_id=UUF00011.1;transl_table=11 CP098602.1 Genbank gene 2293465 2295849 . - . ID=gene-NDY24_10180;Name=NDY24_10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10180 CP098602.1 Protein Homology CDS 2293465 2295849 . - 0 ID=cds-UUF00356.1;Parent=gene-NDY24_10180;Dbxref=NCBI_GP:UUF00356.1;Name=UUF00356.1;Ontology_term=GO:0005975,GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453039.1;locus_tag=NDY24_10180;product=GH92 family glycosyl hydrolase;protein_id=UUF00356.1;transl_table=11 CP098602.1 Genbank gene 2296346 2297704 . - . ID=gene-NDY24_10185;Name=NDY24_10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10185 CP098602.1 Protein Homology CDS 2296346 2297704 . - 0 ID=cds-UUF00012.1;Parent=gene-NDY24_10185;Dbxref=NCBI_GP:UUF00012.1;Name=UUF00012.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017231.2;locus_tag=NDY24_10185;product=hypothetical protein;protein_id=UUF00012.1;transl_table=11 CP098602.1 Genbank gene 2297951 2298454 . - . ID=gene-NDY24_10190;Name=NDY24_10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10190 CP098602.1 Protein Homology CDS 2297951 2298454 . - 0 ID=cds-UUF00013.1;Parent=gene-NDY24_10190;Dbxref=NCBI_GP:UUF00013.1;Name=UUF00013.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012801.2;locus_tag=NDY24_10190;product=TonB-dependent receptor;protein_id=UUF00013.1;transl_table=11 CP098602.1 Genbank gene 2298607 2299038 . - . ID=gene-NDY24_10195;Name=NDY24_10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10195 CP098602.1 Protein Homology CDS 2298607 2299038 . - 0 ID=cds-UUF00014.1;Parent=gene-NDY24_10195;Dbxref=NCBI_GP:UUF00014.1;Name=UUF00014.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012801.2;locus_tag=NDY24_10195;product=TonB-dependent receptor;protein_id=UUF00014.1;transl_table=11 CP098602.1 Genbank pseudogene 2299166 2299303 . - . ID=gene-NDY24_10200;Name=NDY24_10200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_10200;pseudo=true CP098602.1 Protein Homology CDS 2299166 2299303 . - 0 ID=cds-NDY24_10200;Parent=gene-NDY24_10200;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012801.2;locus_tag=NDY24_10200;product=TonB-dependent receptor;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2299282 2300148 . - . ID=gene-NDY24_10205;Name=NDY24_10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10205 CP098602.1 GeneMarkS-2+ CDS 2299282 2300148 . - 0 ID=cds-UUF00015.1;Parent=gene-NDY24_10205;Dbxref=NCBI_GP:UUF00015.1;Name=UUF00015.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_10205;product=hypothetical protein;protein_id=UUF00015.1;transl_table=11 CP098602.1 Genbank gene 2300203 2301015 . - . ID=gene-NDY24_10210;Name=NDY24_10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10210 CP098602.1 Protein Homology CDS 2300203 2301015 . - 0 ID=cds-UUF00016.1;Parent=gene-NDY24_10210;Dbxref=NCBI_GP:UUF00016.1;Name=UUF00016.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019335.2;locus_tag=NDY24_10210;product=TonB-dependent receptor plug domain-containing protein;protein_id=UUF00016.1;transl_table=11 CP098602.1 Genbank gene 2301582 2301974 . - . ID=gene-NDY24_10215;Name=NDY24_10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10215 CP098602.1 Protein Homology CDS 2301582 2301974 . - 0 ID=cds-UUF00017.1;Parent=gene-NDY24_10215;Dbxref=NCBI_GP:UUF00017.1;Name=UUF00017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902101.1;locus_tag=NDY24_10215;product=DUF2628 domain-containing protein;protein_id=UUF00017.1;transl_table=11 CP098602.1 Genbank gene 2302113 2303861 . - . ID=gene-NDY24_10220;Name=NDY24_10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10220 CP098602.1 Protein Homology CDS 2302113 2303861 . - 0 ID=cds-UUF00018.1;Parent=gene-NDY24_10220;Dbxref=NCBI_GP:UUF00018.1;Name=UUF00018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016848720.1;locus_tag=NDY24_10220;product=diguanylate cyclase;protein_id=UUF00018.1;transl_table=11 CP098602.1 Genbank gene 2304001 2305191 . - . ID=gene-NDY24_10225;Name=NDY24_10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10225 CP098602.1 Protein Homology CDS 2304001 2305191 . - 0 ID=cds-UUF00357.1;Parent=gene-NDY24_10225;Dbxref=NCBI_GP:UUF00357.1;Name=UUF00357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453042.1;locus_tag=NDY24_10225;product=helix-turn-helix domain-containing protein;protein_id=UUF00357.1;transl_table=11 CP098602.1 Genbank pseudogene 2305550 2306721 . - . ID=gene-NDY24_10230;Name=NDY24_10230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_10230;pseudo=true CP098602.1 Protein Homology CDS 2305550 2306721 . - 0 ID=cds-NDY24_10230;Parent=gene-NDY24_10230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453043.1;locus_tag=NDY24_10230;product=glycerate kinase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2306747 2308057 . - . ID=gene-NDY24_10235;Name=NDY24_10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10235 CP098602.1 Protein Homology CDS 2306747 2308057 . - 0 ID=cds-UUF00019.1;Parent=gene-NDY24_10235;Dbxref=NCBI_GP:UUF00019.1;Name=UUF00019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160000.1;locus_tag=NDY24_10235;product=MFS transporter;protein_id=UUF00019.1;transl_table=11 CP098602.1 Genbank gene 2308514 2309770 . - . ID=gene-NDY24_10240;Name=NDY24_10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10240 CP098602.1 Protein Homology CDS 2308514 2309770 . - 0 ID=cds-UUF00020.1;Parent=gene-NDY24_10240;Dbxref=NCBI_GP:UUF00020.1;Name=UUF00020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162756.1;locus_tag=NDY24_10240;product=dipeptidase;protein_id=UUF00020.1;transl_table=11 CP098602.1 Genbank gene 2309909 2310385 . - . ID=gene-NDY24_10245;Name=NDY24_10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10245 CP098602.1 Protein Homology CDS 2309909 2310385 . - 0 ID=cds-UUF00021.1;Parent=gene-NDY24_10245;Dbxref=NCBI_GP:UUF00021.1;Name=UUF00021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453047.1;locus_tag=NDY24_10245;product=hypothetical protein;protein_id=UUF00021.1;transl_table=11 CP098602.1 Genbank gene 2310468 2312603 . - . ID=gene-NDY24_10250;Name=NDY24_10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10250 CP098602.1 Protein Homology CDS 2310468 2312603 . - 0 ID=cds-UUF00022.1;Parent=gene-NDY24_10250;Dbxref=NCBI_GP:UUF00022.1;Name=UUF00022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453048.1;locus_tag=NDY24_10250;product=acylase;protein_id=UUF00022.1;transl_table=11 CP098602.1 Genbank gene 2312615 2315017 . - . ID=gene-NDY24_10255;Name=NDY24_10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10255 CP098602.1 Protein Homology CDS 2312615 2315017 . - 0 ID=cds-UUF00023.1;Parent=gene-NDY24_10255;Dbxref=NCBI_GP:UUF00023.1;Name=UUF00023.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012801.2;locus_tag=NDY24_10255;product=TonB-dependent receptor;protein_id=UUF00023.1;transl_table=11 CP098602.1 Genbank gene 2315086 2315421 . + . ID=gene-NDY24_10260;Name=NDY24_10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10260 CP098602.1 GeneMarkS-2+ CDS 2315086 2315421 . + 0 ID=cds-UUF00024.1;Parent=gene-NDY24_10260;Dbxref=NCBI_GP:UUF00024.1;Name=UUF00024.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_10260;product=hypothetical protein;protein_id=UUF00024.1;transl_table=11 CP098602.1 Genbank gene 2315532 2316515 . - . ID=gene-NDY24_10265;Name=NDY24_10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10265 CP098602.1 Protein Homology CDS 2315532 2316515 . - 0 ID=cds-UUF00025.1;Parent=gene-NDY24_10265;Dbxref=NCBI_GP:UUF00025.1;Name=UUF00025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453052.1;locus_tag=NDY24_10265;product=FecR domain-containing protein;protein_id=UUF00025.1;transl_table=11 CP098602.1 Genbank gene 2316518 2317105 . - . ID=gene-NDY24_10270;Name=NDY24_10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10270 CP098602.1 Protein Homology CDS 2316518 2317105 . - 0 ID=cds-UUF00026.1;Parent=gene-NDY24_10270;Dbxref=NCBI_GP:UUF00026.1;Name=UUF00026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901858.1;locus_tag=NDY24_10270;product=sigma-70 family RNA polymerase sigma factor;protein_id=UUF00026.1;transl_table=11 CP098602.1 Genbank gene 2317481 2317621 . + . ID=gene-NDY24_10275;Name=NDY24_10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10275 CP098602.1 GeneMarkS-2+ CDS 2317481 2317621 . + 0 ID=cds-UUF00027.1;Parent=gene-NDY24_10275;Dbxref=NCBI_GP:UUF00027.1;Name=UUF00027.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_10275;product=hypothetical protein;protein_id=UUF00027.1;transl_table=11 CP098602.1 Genbank gene 2317711 2318028 . - . ID=gene-NDY24_10280;Name=NDY24_10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10280 CP098602.1 Protein Homology CDS 2317711 2318028 . - 0 ID=cds-UUF00028.1;Parent=gene-NDY24_10280;Dbxref=NCBI_GP:UUF00028.1;Name=UUF00028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011039291.1;locus_tag=NDY24_10280;product=hypothetical protein;protein_id=UUF00028.1;transl_table=11 CP098602.1 Genbank gene 2318068 2318144 . - . ID=gene-NDY24_10285;Name=NDY24_10285;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_10285 CP098602.1 cmsearch ncRNA 2318068 2318144 . - . ID=rna-NDY24_10285;Parent=gene-NDY24_10285;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_10285;product=sX9 sRNA CP098602.1 cmsearch exon 2318068 2318144 . - . ID=exon-NDY24_10285-1;Parent=rna-NDY24_10285;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_10285;product=sX9 sRNA CP098602.1 Genbank gene 2318217 2319383 . - . ID=gene-NDY24_10290;Name=NDY24_10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10290 CP098602.1 Protein Homology CDS 2318217 2319383 . - 0 ID=cds-UUF00029.1;Parent=gene-NDY24_10290;Dbxref=NCBI_GP:UUF00029.1;Name=UUF00029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155989.1;locus_tag=NDY24_10290;product=class I SAM-dependent rRNA methyltransferase;protein_id=UUF00029.1;transl_table=11 CP098602.1 Genbank gene 2319702 2320658 . + . ID=gene-NDY24_10295;Name=NDY24_10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10295 CP098602.1 Protein Homology CDS 2319702 2320658 . + 0 ID=cds-UUF00030.1;Parent=gene-NDY24_10295;Dbxref=NCBI_GP:UUF00030.1;Name=UUF00030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912402.1;locus_tag=NDY24_10295;product=TerC family protein;protein_id=UUF00030.1;transl_table=11 CP098602.1 Genbank gene 2321505 2322293 . + . ID=gene-NDY24_10300;Name=NDY24_10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10300 CP098602.1 Protein Homology CDS 2321505 2322293 . + 0 ID=cds-UUF00031.1;Parent=gene-NDY24_10300;Dbxref=NCBI_GP:UUF00031.1;Name=UUF00031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482239.1;locus_tag=NDY24_10300;product=rhomboid family intramembrane serine protease;protein_id=UUF00031.1;transl_table=11 CP098602.1 Genbank gene 2322373 2323473 . - . ID=gene-NDY24_10305;Name=NDY24_10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10305 CP098602.1 Protein Homology CDS 2322373 2323473 . - 0 ID=cds-UUF00032.1;Parent=gene-NDY24_10305;Dbxref=NCBI_GP:UUF00032.1;Name=UUF00032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155987.1;locus_tag=NDY24_10305;product=glycerophosphodiester phosphodiesterase;protein_id=UUF00032.1;transl_table=11 CP098602.1 Genbank gene 2323551 2323627 . + . ID=gene-NDY24_10310;Name=NDY24_10310;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_10310 CP098602.1 cmsearch ncRNA 2323551 2323627 . + . ID=rna-NDY24_10310;Parent=gene-NDY24_10310;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_10310;product=sX9 sRNA CP098602.1 cmsearch exon 2323551 2323627 . + . ID=exon-NDY24_10310-1;Parent=rna-NDY24_10310;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_10310;product=sX9 sRNA CP098602.1 Genbank gene 2323725 2326025 . - . ID=gene-NDY24_10315;Name=NDY24_10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10315 CP098602.1 Protein Homology CDS 2323725 2326025 . - 0 ID=cds-UUF00033.1;Parent=gene-NDY24_10315;Dbxref=NCBI_GP:UUF00033.1;Name=UUF00033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160003.1;locus_tag=NDY24_10315;product=TonB-dependent receptor;protein_id=UUF00033.1;transl_table=11 CP098602.1 Genbank gene 2326220 2327077 . + . ID=gene-NDY24_10320;Name=NDY24_10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10320 CP098602.1 Protein Homology CDS 2326220 2327077 . + 0 ID=cds-UUF00034.1;Parent=gene-NDY24_10320;Dbxref=NCBI_GP:UUF00034.1;Name=UUF00034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971341.1;locus_tag=NDY24_10320;product=phosphatase PAP2 family protein;protein_id=UUF00034.1;transl_table=11 CP098602.1 Genbank gene 2327790 2330540 . + . ID=gene-NDY24_10325;Name=NDY24_10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10325 CP098602.1 Protein Homology CDS 2327790 2330540 . + 0 ID=cds-UUF00035.1;Parent=gene-NDY24_10325;Dbxref=NCBI_GP:UUF00035.1;Name=UUF00035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011039298.1;locus_tag=NDY24_10325;product=TonB-dependent receptor plug domain-containing protein;protein_id=UUF00035.1;transl_table=11 CP098602.1 Genbank gene 2330537 2331300 . - . ID=gene-NDY24_10330;Name=NDY24_10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10330 CP098602.1 Protein Homology CDS 2330985 2331300 . - 0 ID=cds-UUF00036.1;Parent=gene-NDY24_10330;Dbxref=NCBI_GP:UUF00036.1;Name=UUF00036.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=NDY24_10330;product=IS5 family transposase;protein_id=UUF00036.1;transl_table=11 CP098602.1 Protein Homology CDS 2330537 2330985 . - 2 ID=cds-UUF00036.1;Parent=gene-NDY24_10330;Dbxref=NCBI_GP:UUF00036.1;Name=UUF00036.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=NDY24_10330;product=IS5 family transposase;protein_id=UUF00036.1;transl_table=11 CP098602.1 Genbank gene 2331372 2331650 . + . ID=gene-NDY24_10335;Name=NDY24_10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10335 CP098602.1 GeneMarkS-2+ CDS 2331372 2331650 . + 0 ID=cds-UUF00037.1;Parent=gene-NDY24_10335;Dbxref=NCBI_GP:UUF00037.1;Name=UUF00037.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_10335;product=TonB-dependent receptor;protein_id=UUF00037.1;transl_table=11 CP098602.1 Genbank gene 2331753 2333093 . - . ID=gene-NDY24_10340;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=NDY24_10340 CP098602.1 Protein Homology CDS 2331753 2333093 . - 0 ID=cds-UUF00038.1;Parent=gene-NDY24_10340;Dbxref=NCBI_GP:UUF00038.1;Name=UUF00038.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349216.1;locus_tag=NDY24_10340;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=UUF00038.1;transl_table=11 CP098602.1 Genbank gene 2333178 2334899 . - . ID=gene-NDY24_10345;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=NDY24_10345 CP098602.1 Protein Homology CDS 2333178 2334899 . - 0 ID=cds-UUF00039.1;Parent=gene-NDY24_10345;Dbxref=NCBI_GP:UUF00039.1;Name=UUF00039.1;Ontology_term=GO:0032977,GO:0016021;gbkey=CDS;gene=yidC;go_component=integral component of membrane|0016021||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482225.1;locus_tag=NDY24_10345;product=membrane protein insertase YidC;protein_id=UUF00039.1;transl_table=11 CP098602.1 Genbank gene 2334915 2335361 . - . ID=gene-NDY24_10350;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=NDY24_10350 CP098602.1 Protein Homology CDS 2334915 2335361 . - 0 ID=cds-UUF00040.1;Parent=gene-NDY24_10350;Dbxref=NCBI_GP:UUF00040.1;Name=UUF00040.1;Ontology_term=GO:0006396,GO:0004526;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011039302.1;locus_tag=NDY24_10350;product=ribonuclease P protein component;protein_id=UUF00040.1;transl_table=11 CP098602.1 Genbank gene 2335400 2335540 . - . ID=gene-NDY24_10355;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=NDY24_10355 CP098602.1 Protein Homology CDS 2335400 2335540 . - 0 ID=cds-UUF00041.1;Parent=gene-NDY24_10355;Dbxref=NCBI_GP:UUF00041.1;Name=UUF00041.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404565.1;locus_tag=NDY24_10355;product=50S ribosomal protein L34;protein_id=UUF00041.1;transl_table=11 CP098602.1 Genbank gene 2335783 2337111 . + . ID=gene-NDY24_10360;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=NDY24_10360 CP098602.1 Protein Homology CDS 2335783 2337111 . + 0 ID=cds-UUF00042.1;Parent=gene-NDY24_10360;Dbxref=NCBI_GP:UUF00042.1;Name=UUF00042.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050021.1;locus_tag=NDY24_10360;product=chromosomal replication initiator protein DnaA;protein_id=UUF00042.1;transl_table=11 CP098602.1 Genbank gene 2337389 2338489 . + . ID=gene-NDY24_10365;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=NDY24_10365 CP098602.1 Protein Homology CDS 2337389 2338489 . + 0 ID=cds-UUF00043.1;Parent=gene-NDY24_10365;Dbxref=NCBI_GP:UUF00043.1;Name=UUF00043.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451791.1;locus_tag=NDY24_10365;product=DNA polymerase III subunit beta;protein_id=UUF00043.1;transl_table=11 CP098602.1 Genbank gene 2339213 2340319 . + . ID=gene-NDY24_10370;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=NDY24_10370 CP098602.1 Protein Homology CDS 2339213 2340319 . + 0 ID=cds-UUF00044.1;Parent=gene-NDY24_10370;Dbxref=NCBI_GP:UUF00044.1;Name=UUF00044.1;Ontology_term=GO:0006281,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376403.1;locus_tag=NDY24_10370;product=DNA replication/repair protein RecF;protein_id=UUF00044.1;transl_table=11 CP098602.1 Genbank gene 2340434 2342878 . + . ID=gene-NDY24_10375;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=NDY24_10375 CP098602.1 Protein Homology CDS 2340434 2342878 . + 0 ID=cds-UUF00045.1;Parent=gene-NDY24_10375;Dbxref=NCBI_GP:UUF00045.1;Name=UUF00045.1;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912438.1;locus_tag=NDY24_10375;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=UUF00045.1;transl_table=11 CP098602.1 Genbank gene 2342948 2343784 . + . ID=gene-NDY24_10380;Name=NDY24_10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10380 CP098602.1 Protein Homology CDS 2342948 2343784 . + 0 ID=cds-UUF00046.1;Parent=gene-NDY24_10380;Dbxref=NCBI_GP:UUF00046.1;Name=UUF00046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364801.1;locus_tag=NDY24_10380;product=CPBP family intramembrane metalloprotease;protein_id=UUF00046.1;transl_table=11 CP098602.1 Genbank gene 2343847 2344653 . + . ID=gene-NDY24_10385;Name=NDY24_10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10385 CP098602.1 Protein Homology CDS 2343847 2344653 . + 0 ID=cds-UUF00047.1;Parent=gene-NDY24_10385;Dbxref=NCBI_GP:UUF00047.1;Name=UUF00047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901838.1;locus_tag=NDY24_10385;product=M48 family metallopeptidase;protein_id=UUF00047.1;transl_table=11 CP098602.1 Genbank gene 2344806 2346002 . + . ID=gene-NDY24_10390;Name=NDY24_10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10390 CP098602.1 Protein Homology CDS 2344806 2346002 . + 0 ID=cds-UUF00048.1;Parent=gene-NDY24_10390;Dbxref=NCBI_GP:UUF00048.1;Name=UUF00048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376399.1;locus_tag=NDY24_10390;product=tetratricopeptide repeat protein;protein_id=UUF00048.1;transl_table=11 CP098602.1 Genbank gene 2346270 2346827 . + . ID=gene-NDY24_10395;Name=NDY24_10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10395 CP098602.1 Protein Homology CDS 2346270 2346827 . + 0 ID=cds-UUF00358.1;Parent=gene-NDY24_10395;Dbxref=NCBI_GP:UUF00358.1;Name=UUF00358.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505935.1;locus_tag=NDY24_10395;product=TonB family protein;protein_id=UUF00358.1;transl_table=11 CP098602.1 Genbank gene 2346912 2347676 . + . ID=gene-NDY24_10400;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=NDY24_10400 CP098602.1 Protein Homology CDS 2346912 2347676 . + 0 ID=cds-UUF00049.1;Parent=gene-NDY24_10400;Dbxref=NCBI_GP:UUF00049.1;Name=UUF00049.1;gbkey=CDS;gene=exbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002805928.1;locus_tag=NDY24_10400;product=TonB-system energizer ExbB;protein_id=UUF00049.1;transl_table=11 CP098602.1 Genbank gene 2347722 2348144 . + . ID=gene-NDY24_10405;Name=NDY24_10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10405 CP098602.1 Protein Homology CDS 2347722 2348144 . + 0 ID=cds-UUF00050.1;Parent=gene-NDY24_10405;Dbxref=NCBI_GP:UUF00050.1;Name=UUF00050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912447.1;locus_tag=NDY24_10405;product=biopolymer transporter ExbD;protein_id=UUF00050.1;transl_table=11 CP098602.1 Genbank gene 2348148 2348558 . + . ID=gene-NDY24_10410;Name=NDY24_10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10410 CP098602.1 Protein Homology CDS 2348148 2348558 . + 0 ID=cds-UUF00051.1;Parent=gene-NDY24_10410;Dbxref=NCBI_GP:UUF00051.1;Name=UUF00051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035269.1;locus_tag=NDY24_10410;product=biopolymer transporter ExbD;protein_id=UUF00051.1;transl_table=11 CP098602.1 Genbank pseudogene 2348693 2348782 . + . ID=gene-NDY24_10415;Name=NDY24_10415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_10415;pseudo=true CP098602.1 Protein Homology CDS 2348693 2348782 . + 0 ID=cds-NDY24_10415;Parent=gene-NDY24_10415;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035269.1;locus_tag=NDY24_10415;product=biopolymer transporter ExbD;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2349045 2349812 . - . ID=gene-NDY24_10420;Name=NDY24_10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10420 CP098602.1 Protein Homology CDS 2349045 2349812 . - 0 ID=cds-UUF00052.1;Parent=gene-NDY24_10420;Dbxref=NCBI_GP:UUF00052.1;Name=UUF00052.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451800.1;locus_tag=NDY24_10420;product=pyridoxine 5'-phosphate synthase;protein_id=UUF00052.1;transl_table=11 CP098602.1 Genbank gene 2349823 2350092 . - . ID=gene-NDY24_10425;Name=NDY24_10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10425 CP098602.1 Protein Homology CDS 2349823 2350092 . - 0 ID=cds-UUF00053.1;Parent=gene-NDY24_10425;Dbxref=NCBI_GP:UUF00053.1;Name=UUF00053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155969.1;locus_tag=NDY24_10425;product=hypothetical protein;protein_id=UUF00053.1;transl_table=11 CP098602.1 Genbank gene 2350168 2351628 . - . ID=gene-NDY24_10430;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=NDY24_10430 CP098602.1 Protein Homology CDS 2350168 2351628 . - 0 ID=cds-UUF00054.1;Parent=gene-NDY24_10430;Dbxref=NCBI_GP:UUF00054.1;Name=UUF00054.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155968.1;locus_tag=NDY24_10430;product=cardiolipin synthase;protein_id=UUF00054.1;transl_table=11 CP098602.1 Genbank pseudogene 2351765 2352865 . + . ID=gene-NDY24_10435;Name=NDY24_10435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_10435;pseudo=true CP098602.1 Protein Homology CDS 2351765 2352865 . + 0 ID=cds-NDY24_10435;Parent=gene-NDY24_10435;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117235.1;locus_tag=NDY24_10435;product=PA0069 family radical SAM protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2352995 2353699 . - . ID=gene-NDY24_10440;Name=NDY24_10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10440 CP098602.1 Protein Homology CDS 2352995 2353699 . - 0 ID=cds-UUF00055.1;Parent=gene-NDY24_10440;Dbxref=NCBI_GP:UUF00055.1;Name=UUF00055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482181.1;locus_tag=NDY24_10440;product=2OG-Fe(II) oxygenase;protein_id=UUF00055.1;transl_table=11 CP098602.1 Genbank pseudogene 2353942 2354993 . + . ID=gene-NDY24_10445;Name=NDY24_10445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_10445;pseudo=true CP098602.1 Protein Homology CDS 2353942 2354993 . + 0 ID=cds-NDY24_10445;Parent=gene-NDY24_10445;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346137.1;locus_tag=NDY24_10445;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2355158 2356498 . - . ID=gene-NDY24_10450;Name=NDY24_10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10450 CP098602.1 Protein Homology CDS 2355158 2356498 . - 0 ID=cds-UUF00056.1;Parent=gene-NDY24_10450;Dbxref=NCBI_GP:UUF00056.1;Name=UUF00056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968187.1;locus_tag=NDY24_10450;product=outer membrane protein transport protein;protein_id=UUF00056.1;transl_table=11 CP098602.1 Genbank gene 2356716 2357408 . + . ID=gene-NDY24_10455;Name=NDY24_10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10455 CP098602.1 Protein Homology CDS 2356716 2357408 . + 0 ID=cds-UUF00057.1;Parent=gene-NDY24_10455;Dbxref=NCBI_GP:UUF00057.1;Name=UUF00057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301614.1;locus_tag=NDY24_10455;product=rhomboid family intramembrane serine protease;protein_id=UUF00057.1;transl_table=11 CP098602.1 Genbank gene 2357520 2357840 . + . ID=gene-NDY24_10460;Name=NDY24_10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10460 CP098602.1 Protein Homology CDS 2357520 2357840 . + 0 ID=cds-UUF00058.1;Parent=gene-NDY24_10460;Dbxref=NCBI_GP:UUF00058.1;Name=UUF00058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014088873.1;locus_tag=NDY24_10460;product=DUF1820 family protein;protein_id=UUF00058.1;transl_table=11 CP098602.1 Genbank gene 2357840 2358826 . + . ID=gene-NDY24_10465;Name=NDY24_10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10465 CP098602.1 Protein Homology CDS 2357840 2358826 . + 0 ID=cds-UUF00059.1;Parent=gene-NDY24_10465;Dbxref=NCBI_GP:UUF00059.1;Name=UUF00059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505945.1;locus_tag=NDY24_10465;product=D-2-hydroxyacid dehydrogenase family protein;protein_id=UUF00059.1;transl_table=11 CP098602.1 Genbank gene 2359052 2360572 . - . ID=gene-NDY24_10470;Name=NDY24_10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10470 CP098602.1 Protein Homology CDS 2359052 2360572 . - 0 ID=cds-UUF00060.1;Parent=gene-NDY24_10470;Dbxref=NCBI_GP:UUF00060.1;Name=UUF00060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005991665.1;locus_tag=NDY24_10470;product=S41 family peptidase;protein_id=UUF00060.1;transl_table=11 CP098602.1 Genbank gene 2360908 2362230 . - . ID=gene-NDY24_10475;Name=NDY24_10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10475 CP098602.1 Protein Homology CDS 2360908 2362230 . - 0 ID=cds-UUF00061.1;Parent=gene-NDY24_10475;Dbxref=NCBI_GP:UUF00061.1;Name=UUF00061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850464.1;locus_tag=NDY24_10475;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=UUF00061.1;transl_table=11 CP098602.1 Genbank gene 2362328 2362984 . + . ID=gene-NDY24_10480;Name=NDY24_10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10480 CP098602.1 Protein Homology CDS 2362328 2362984 . + 0 ID=cds-UUF00062.1;Parent=gene-NDY24_10480;Dbxref=NCBI_GP:UUF00062.1;Name=UUF00062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968180.1;locus_tag=NDY24_10480;product=hypothetical protein;protein_id=UUF00062.1;transl_table=11 CP098602.1 Genbank gene 2363043 2364848 . + . ID=gene-NDY24_10485;Name=NDY24_10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10485 CP098602.1 Protein Homology CDS 2363043 2364848 . + 0 ID=cds-UUF00063.1;Parent=gene-NDY24_10485;Dbxref=NCBI_GP:UUF00063.1;Name=UUF00063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452236.1;locus_tag=NDY24_10485;product=M28 family metallopeptidase;protein_id=UUF00063.1;transl_table=11 CP098602.1 Genbank gene 2365053 2365502 . - . ID=gene-NDY24_10490;Name=NDY24_10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10490 CP098602.1 Protein Homology CDS 2365053 2365502 . - 0 ID=cds-UUF00064.1;Parent=gene-NDY24_10490;Dbxref=NCBI_GP:UUF00064.1;Name=UUF00064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166071.1;locus_tag=NDY24_10490;product=PepSY domain-containing protein;protein_id=UUF00064.1;transl_table=11 CP098602.1 Genbank gene 2365796 2366854 . - . ID=gene-NDY24_10495;Name=NDY24_10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10495 CP098602.1 Protein Homology CDS 2365796 2366854 . - 0 ID=cds-UUF00359.1;Parent=gene-NDY24_10495;Dbxref=NCBI_GP:UUF00359.1;Name=UUF00359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163756.1;locus_tag=NDY24_10495;product=glycoside hydrolase family 5 protein;protein_id=UUF00359.1;transl_table=11 CP098602.1 Genbank gene 2367555 2368616 . - . ID=gene-NDY24_10500;Name=NDY24_10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10500 CP098602.1 Protein Homology CDS 2367555 2368616 . - 0 ID=cds-UUF00065.1;Parent=gene-NDY24_10500;Dbxref=NCBI_GP:UUF00065.1;Name=UUF00065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163756.1;locus_tag=NDY24_10500;product=glycoside hydrolase family 5 protein;protein_id=UUF00065.1;transl_table=11 CP098602.1 Genbank gene 2369002 2369997 . - . ID=gene-NDY24_10505;Name=NDY24_10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10505 CP098602.1 Protein Homology CDS 2369002 2369997 . - 0 ID=cds-UUF00360.1;Parent=gene-NDY24_10505;Dbxref=NCBI_GP:UUF00360.1;Name=UUF00360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452232.1;locus_tag=NDY24_10505;product=glycoside hydrolase family 5 protein;protein_id=UUF00360.1;transl_table=11 CP098602.1 Genbank gene 2370698 2371771 . - . ID=gene-NDY24_10510;Name=NDY24_10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10510 CP098602.1 Protein Homology CDS 2370698 2371771 . - 0 ID=cds-UUF00066.1;Parent=gene-NDY24_10510;Dbxref=NCBI_GP:UUF00066.1;Name=UUF00066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011345792.1;locus_tag=NDY24_10510;product=glycoside hydrolase family 5 protein;protein_id=UUF00066.1;transl_table=11 CP098602.1 Genbank gene 2372075 2373130 . + . ID=gene-NDY24_10515;Name=NDY24_10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10515 CP098602.1 Protein Homology CDS 2372075 2373130 . + 0 ID=cds-UUF00067.1;Parent=gene-NDY24_10515;Dbxref=NCBI_GP:UUF00067.1;Name=UUF00067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851500.1;locus_tag=NDY24_10515;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=UUF00067.1;transl_table=11 CP098602.1 Genbank gene 2373296 2374393 . - . ID=gene-NDY24_10520;Name=NDY24_10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10520 CP098602.1 Protein Homology CDS 2373296 2374393 . - 0 ID=cds-UUF00068.1;Parent=gene-NDY24_10520;Dbxref=NCBI_GP:UUF00068.1;Name=UUF00068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452228.1;locus_tag=NDY24_10520;product=acyltransferase;protein_id=UUF00068.1;transl_table=11 CP098602.1 Genbank gene 2375100 2376581 . - . ID=gene-NDY24_10525;Name=NDY24_10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10525 CP098602.1 Protein Homology CDS 2375100 2376581 . - 0 ID=cds-UUF00069.1;Parent=gene-NDY24_10525;Dbxref=NCBI_GP:UUF00069.1;Name=UUF00069.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912482.1;locus_tag=NDY24_10525;product=FAD-dependent oxidoreductase;protein_id=UUF00069.1;transl_table=11 CP098602.1 Genbank gene 2376707 2381179 . - . ID=gene-NDY24_10530;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=NDY24_10530 CP098602.1 Protein Homology CDS 2376707 2381179 . - 0 ID=cds-UUF00070.1;Parent=gene-NDY24_10530;Dbxref=NCBI_GP:UUF00070.1;Name=UUF00070.1;Ontology_term=GO:0006537,GO:0006807,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237055.1;locus_tag=NDY24_10530;product=glutamate synthase large subunit;protein_id=UUF00070.1;transl_table=11 CP098602.1 Genbank gene 2381382 2381762 . - . ID=gene-NDY24_10535;Name=NDY24_10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10535 CP098602.1 Protein Homology CDS 2381382 2381762 . - 0 ID=cds-UUF00071.1;Parent=gene-NDY24_10535;Dbxref=NCBI_GP:UUF00071.1;Name=UUF00071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159672.1;locus_tag=NDY24_10535;product=I78 family peptidase inhibitor;protein_id=UUF00071.1;transl_table=11 CP098602.1 Genbank gene 2381821 2383212 . + . ID=gene-NDY24_10540;Name=NDY24_10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10540 CP098602.1 Protein Homology CDS 2381821 2383212 . + 0 ID=cds-UUF00361.1;Parent=gene-NDY24_10540;Dbxref=NCBI_GP:UUF00361.1;Name=UUF00361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505966.1;locus_tag=NDY24_10540;product=DNA topoisomerase IB;protein_id=UUF00361.1;transl_table=11 CP098602.1 Genbank gene 2383187 2383366 . - . ID=gene-NDY24_10545;Name=NDY24_10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10545 CP098602.1 GeneMarkS-2+ CDS 2383187 2383366 . - 0 ID=cds-UUF00072.1;Parent=gene-NDY24_10545;Dbxref=NCBI_GP:UUF00072.1;Name=UUF00072.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_10545;product=hypothetical protein;protein_id=UUF00072.1;transl_table=11 CP098602.1 Genbank gene 2383373 2383951 . - . ID=gene-NDY24_10550;Name=NDY24_10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10550 CP098602.1 Protein Homology CDS 2383373 2383951 . - 0 ID=cds-UUF00073.1;Parent=gene-NDY24_10550;Dbxref=NCBI_GP:UUF00073.1;Name=UUF00073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012436880.1;locus_tag=NDY24_10550;product=methyltransferase domain-containing protein;protein_id=UUF00073.1;transl_table=11 CP098602.1 Genbank gene 2384770 2384845 . - . ID=gene-NDY24_10555;Name=NDY24_10555;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_10555 CP098602.1 cmsearch ncRNA 2384770 2384845 . - . ID=rna-NDY24_10555;Parent=gene-NDY24_10555;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_10555;product=sX9 sRNA CP098602.1 cmsearch exon 2384770 2384845 . - . ID=exon-NDY24_10555-1;Parent=rna-NDY24_10555;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_10555;product=sX9 sRNA CP098602.1 Genbank gene 2385015 2385359 . - . ID=gene-NDY24_10560;Name=NDY24_10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10560 CP098602.1 Protein Homology CDS 2385015 2385359 . - 0 ID=cds-UUF00074.1;Parent=gene-NDY24_10560;Dbxref=NCBI_GP:UUF00074.1;Name=UUF00074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901594.1;locus_tag=NDY24_10560;product=hypothetical protein;protein_id=UUF00074.1;transl_table=11 CP098602.1 Genbank gene 2385645 2386424 . + . ID=gene-NDY24_10565;Name=NDY24_10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10565 CP098602.1 Protein Homology CDS 2385645 2386424 . + 0 ID=cds-UUF00075.1;Parent=gene-NDY24_10565;Dbxref=NCBI_GP:UUF00075.1;Name=UUF00075.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014708.2;locus_tag=NDY24_10565;product=pirin family protein;protein_id=UUF00075.1;transl_table=11 CP098602.1 Genbank gene 2386375 2386536 . + . ID=gene-NDY24_10570;Name=NDY24_10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10570 CP098602.1 GeneMarkS-2+ CDS 2386375 2386536 . + 0 ID=cds-UUF00076.1;Parent=gene-NDY24_10570;Dbxref=NCBI_GP:UUF00076.1;Name=UUF00076.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_10570;product=hypothetical protein;protein_id=UUF00076.1;transl_table=11 CP098602.1 Genbank gene 2386787 2387401 . + . ID=gene-NDY24_10575;Name=NDY24_10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10575 CP098602.1 Protein Homology CDS 2386787 2387401 . + 0 ID=cds-UUF00077.1;Parent=gene-NDY24_10575;Dbxref=NCBI_GP:UUF00077.1;Name=UUF00077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452221.1;locus_tag=NDY24_10575;product=NAD(P)H-dependent oxidoreductase;protein_id=UUF00077.1;transl_table=11 CP098602.1 Genbank gene 2387658 2388605 . - . ID=gene-NDY24_10580;Name=NDY24_10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10580 CP098602.1 Protein Homology CDS 2387658 2388605 . - 0 ID=cds-UUF00078.1;Parent=gene-NDY24_10580;Dbxref=NCBI_GP:UUF00078.1;Name=UUF00078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016944881.1;locus_tag=NDY24_10580;product=LysR family transcriptional regulator;protein_id=UUF00078.1;transl_table=11 CP098602.1 Genbank gene 2389467 2389688 . - . ID=gene-NDY24_10585;Name=NDY24_10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10585 CP098602.1 GeneMarkS-2+ CDS 2389467 2389688 . - 0 ID=cds-UUF00079.1;Parent=gene-NDY24_10585;Dbxref=NCBI_GP:UUF00079.1;Name=UUF00079.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_10585;product=hypothetical protein;protein_id=UUF00079.1;transl_table=11 CP098602.1 Genbank gene 2389685 2397076 . - . ID=gene-NDY24_10590;Name=NDY24_10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10590 CP098602.1 Protein Homology CDS 2389685 2397076 . - 0 ID=cds-UUF00080.1;Parent=gene-NDY24_10590;Dbxref=NCBI_GP:UUF00080.1;Name=UUF00080.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028476.2;locus_tag=NDY24_10590;product=cyclic beta 1-2 glucan synthetase;protein_id=UUF00080.1;transl_table=11 CP098602.1 Genbank gene 2397052 2398260 . - . ID=gene-NDY24_10595;Name=NDY24_10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10595 CP098602.1 GeneMarkS-2+ CDS 2397052 2398260 . - 0 ID=cds-UUF00081.1;Parent=gene-NDY24_10595;Dbxref=NCBI_GP:UUF00081.1;Name=UUF00081.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_10595;product=hypothetical protein;protein_id=UUF00081.1;transl_table=11 CP098602.1 Genbank pseudogene 2398854 2401201 . + . ID=gene-NDY24_10600;Name=NDY24_10600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_10600;pseudo=true CP098602.1 Protein Homology CDS 2398854 2401201 . + 0 ID=cds-NDY24_10600;Parent=gene-NDY24_10600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005991634.1;locus_tag=NDY24_10600;product=penicillin acylase family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2401440 2401601 . - . ID=gene-NDY24_10605;Name=NDY24_10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10605 CP098602.1 GeneMarkS-2+ CDS 2401440 2401601 . - 0 ID=cds-UUF00082.1;Parent=gene-NDY24_10605;Dbxref=NCBI_GP:UUF00082.1;Name=UUF00082.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_10605;product=hypothetical protein;protein_id=UUF00082.1;transl_table=11 CP098602.1 Genbank gene 2401714 2402571 . - . ID=gene-NDY24_10610;Name=NDY24_10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10610 CP098602.1 Protein Homology CDS 2401714 2402571 . - 0 ID=cds-UUF00083.1;Parent=gene-NDY24_10610;Dbxref=NCBI_GP:UUF00083.1;Name=UUF00083.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024758.2;locus_tag=NDY24_10610;product=serine protease;protein_id=UUF00083.1;transl_table=11 CP098602.1 Genbank gene 2402564 2403640 . - . ID=gene-NDY24_10615;Name=NDY24_10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10615 CP098602.1 GeneMarkS-2+ CDS 2402564 2403640 . - 0 ID=cds-UUF00084.1;Parent=gene-NDY24_10615;Dbxref=NCBI_GP:UUF00084.1;Name=UUF00084.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_10615;product=hypothetical protein;protein_id=UUF00084.1;transl_table=11 CP098602.1 Genbank gene 2403582 2403998 . - . ID=gene-NDY24_10620;Name=NDY24_10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10620 CP098602.1 GeneMarkS-2+ CDS 2403582 2403998 . - 0 ID=cds-UUF00085.1;Parent=gene-NDY24_10620;Dbxref=NCBI_GP:UUF00085.1;Name=UUF00085.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_10620;product=hypothetical protein;protein_id=UUF00085.1;transl_table=11 CP098602.1 Genbank gene 2404445 2404843 . + . ID=gene-NDY24_10625;Name=NDY24_10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10625 CP098602.1 Protein Homology CDS 2404445 2404843 . + 0 ID=cds-UUF00086.1;Parent=gene-NDY24_10625;Dbxref=NCBI_GP:UUF00086.1;Name=UUF00086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572904.1;locus_tag=NDY24_10625;product=BlaI/MecI/CopY family transcriptional regulator;protein_id=UUF00086.1;transl_table=11 CP098602.1 Genbank gene 2404847 2406538 . + . ID=gene-NDY24_10630;Name=NDY24_10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10630 CP098602.1 Protein Homology CDS 2404847 2406538 . + 0 ID=cds-UUF00087.1;Parent=gene-NDY24_10630;Dbxref=NCBI_GP:UUF00087.1;Name=UUF00087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450698.1;locus_tag=NDY24_10630;product=M56 family metallopeptidase;protein_id=UUF00087.1;transl_table=11 CP098602.1 Genbank gene 2407401 2407907 . + . ID=gene-NDY24_10635;Name=NDY24_10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10635 CP098602.1 Protein Homology CDS 2407401 2407907 . + 0 ID=cds-UUF00362.1;Parent=gene-NDY24_10635;Dbxref=NCBI_GP:UUF00362.1;Name=UUF00362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450699.1;locus_tag=NDY24_10635;product=hypothetical protein;protein_id=UUF00362.1;transl_table=11 CP098602.1 Genbank gene 2408254 2409051 . - . ID=gene-NDY24_10640;Name=NDY24_10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10640 CP098602.1 Protein Homology CDS 2408254 2409051 . - 0 ID=cds-UUF00088.1;Parent=gene-NDY24_10640;Dbxref=NCBI_GP:UUF00088.1;Name=UUF00088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158072.1;locus_tag=NDY24_10640;product=DUF1868 domain-containing protein;protein_id=UUF00088.1;transl_table=11 CP098602.1 Genbank gene 2409062 2411725 . - . ID=gene-NDY24_10645;Name=NDY24_10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10645 CP098602.1 Protein Homology CDS 2409062 2411725 . - 0 ID=cds-UUF00089.1;Parent=gene-NDY24_10645;Dbxref=NCBI_GP:UUF00089.1;Name=UUF00089.1;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407250.1;locus_tag=NDY24_10645;product=TonB-dependent receptor;protein_id=UUF00089.1;transl_table=11 CP098602.1 Genbank gene 2411830 2412987 . + . ID=gene-NDY24_10650;Name=NDY24_10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10650 CP098602.1 Protein Homology CDS 2411830 2412987 . + 0 ID=cds-UUF00090.1;Parent=gene-NDY24_10650;Dbxref=NCBI_GP:UUF00090.1;Name=UUF00090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158073.1;locus_tag=NDY24_10650;product=ROK family protein;protein_id=UUF00090.1;transl_table=11 CP098602.1 Genbank gene 2413120 2415270 . + . ID=gene-NDY24_10655;Name=NDY24_10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10655 CP098602.1 Protein Homology CDS 2413120 2415270 . + 0 ID=cds-UUF00091.1;Parent=gene-NDY24_10655;Dbxref=NCBI_GP:UUF00091.1;Name=UUF00091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012436888.1;locus_tag=NDY24_10655;product=glycerophosphodiester phosphodiesterase family protein;protein_id=UUF00091.1;transl_table=11 CP098602.1 Genbank gene 2415296 2417071 . - . ID=gene-NDY24_10660;Name=NDY24_10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10660 CP098602.1 Protein Homology CDS 2415296 2417071 . - 0 ID=cds-UUF00092.1;Parent=gene-NDY24_10660;Dbxref=NCBI_GP:UUF00092.1;Name=UUF00092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501376.1;locus_tag=NDY24_10660;product=ribonuclease H-like domain-containing protein;protein_id=UUF00092.1;transl_table=11 CP098602.1 Genbank pseudogene 2417068 2419564 . - . ID=gene-NDY24_10665;Name=NDY24_10665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_10665;pseudo=true CP098602.1 Protein Homology CDS 2417068 2419564 . - 0 ID=cds-NDY24_10665;Parent=gene-NDY24_10665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237057.1;locus_tag=NDY24_10665;product=DEAD/DEAH box helicase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2419695 2420843 . - . ID=gene-NDY24_10670;Name=NDY24_10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10670 CP098602.1 Protein Homology CDS 2419695 2420843 . - 0 ID=cds-UUF00093.1;Parent=gene-NDY24_10670;Dbxref=NCBI_GP:UUF00093.1;Name=UUF00093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035313.1;locus_tag=NDY24_10670;product=Fic family protein;protein_id=UUF00093.1;transl_table=11 CP098602.1 Genbank gene 2421136 2421798 . + . ID=gene-NDY24_10675;Name=NDY24_10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10675 CP098602.1 Protein Homology CDS 2421136 2421798 . + 0 ID=cds-UUF00094.1;Parent=gene-NDY24_10675;Dbxref=NCBI_GP:UUF00094.1;Name=UUF00094.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809731.1;locus_tag=NDY24_10675;product=hemolysin III family protein;protein_id=UUF00094.1;transl_table=11 CP098602.1 Genbank gene 2421879 2422181 . - . ID=gene-NDY24_10680;Name=NDY24_10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10680 CP098602.1 Protein Homology CDS 2421879 2422181 . - 0 ID=cds-UUF00095.1;Parent=gene-NDY24_10680;Dbxref=NCBI_GP:UUF00095.1;Name=UUF00095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452061.1;locus_tag=NDY24_10680;product=plasmid stabilization protein;protein_id=UUF00095.1;transl_table=11 CP098602.1 Genbank gene 2422178 2422651 . - . ID=gene-NDY24_10685;Name=NDY24_10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10685 CP098602.1 Protein Homology CDS 2422178 2422651 . - 0 ID=cds-UUF00096.1;Parent=gene-NDY24_10685;Dbxref=NCBI_GP:UUF00096.1;Name=UUF00096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452060.1;locus_tag=NDY24_10685;product=hypothetical protein;protein_id=UUF00096.1;transl_table=11 CP098602.1 Genbank gene 2422882 2423406 . - . ID=gene-NDY24_10690;Name=NDY24_10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10690 CP098602.1 Protein Homology CDS 2422882 2423406 . - 0 ID=cds-UUF00097.1;Parent=gene-NDY24_10690;Dbxref=NCBI_GP:UUF00097.1;Name=UUF00097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902924.1;locus_tag=NDY24_10690;product=hypothetical protein;protein_id=UUF00097.1;transl_table=11 CP098602.1 Genbank gene 2423534 2424496 . - . ID=gene-NDY24_10695;Name=NDY24_10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10695 CP098602.1 Protein Homology CDS 2423534 2424496 . - 0 ID=cds-UUF00363.1;Parent=gene-NDY24_10695;Dbxref=NCBI_GP:UUF00363.1;Name=UUF00363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014088902.1;locus_tag=NDY24_10695;product=hypothetical protein;protein_id=UUF00363.1;transl_table=11 CP098602.1 Genbank gene 2425299 2426012 . + . ID=gene-NDY24_10700;Name=NDY24_10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10700 CP098602.1 Protein Homology CDS 2425299 2426012 . + 0 ID=cds-UUF00364.1;Parent=gene-NDY24_10700;Dbxref=NCBI_GP:UUF00364.1;Name=UUF00364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902928.1;locus_tag=NDY24_10700;product=hypothetical protein;protein_id=UUF00364.1;transl_table=11 CP098602.1 Genbank gene 2426017 2426940 . - . ID=gene-NDY24_10705;Name=NDY24_10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10705 CP098602.1 Protein Homology CDS 2426017 2426940 . - 0 ID=cds-UUF00098.1;Parent=gene-NDY24_10705;Dbxref=NCBI_GP:UUF00098.1;Name=UUF00098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452053.1;locus_tag=NDY24_10705;product=LysR family transcriptional regulator;protein_id=UUF00098.1;transl_table=11 CP098602.1 Genbank gene 2427057 2427809 . + . ID=gene-NDY24_10710;Name=NDY24_10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10710 CP098602.1 Protein Homology CDS 2427057 2427809 . + 0 ID=cds-UUF00099.1;Parent=gene-NDY24_10710;Dbxref=NCBI_GP:UUF00099.1;Name=UUF00099.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009043159.1;locus_tag=NDY24_10710;product=SDR family oxidoreductase;protein_id=UUF00099.1;transl_table=11 CP098602.1 Genbank gene 2428014 2428340 . - . ID=gene-NDY24_10715;Name=NDY24_10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10715 CP098602.1 Protein Homology CDS 2428014 2428340 . - 0 ID=cds-UUF00100.1;Parent=gene-NDY24_10715;Dbxref=NCBI_GP:UUF00100.1;Name=UUF00100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452050.1;locus_tag=NDY24_10715;product=nuclear transport factor 2 family protein;protein_id=UUF00100.1;transl_table=11 CP098602.1 Genbank gene 2428431 2428778 . + . ID=gene-NDY24_10720;Name=NDY24_10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10720 CP098602.1 Protein Homology CDS 2428431 2428778 . + 0 ID=cds-UUF00101.1;Parent=gene-NDY24_10720;Dbxref=NCBI_GP:UUF00101.1;Name=UUF00101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452049.1;locus_tag=NDY24_10720;product=helix-turn-helix transcriptional regulator;protein_id=UUF00101.1;transl_table=11 CP098602.1 Genbank gene 2428981 2429124 . + . ID=gene-NDY24_10725;Name=NDY24_10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10725 CP098602.1 Protein Homology CDS 2428981 2429124 . + 0 ID=cds-UUF00102.1;Parent=gene-NDY24_10725;Dbxref=NCBI_GP:UUF00102.1;Name=UUF00102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165256.1;locus_tag=NDY24_10725;product=hypothetical protein;protein_id=UUF00102.1;transl_table=11 CP098602.1 Genbank gene 2429333 2429698 . + . ID=gene-NDY24_10730;Name=NDY24_10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10730 CP098602.1 GeneMarkS-2+ CDS 2429333 2429698 . + 0 ID=cds-UUF00103.1;Parent=gene-NDY24_10730;Dbxref=NCBI_GP:UUF00103.1;Name=UUF00103.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_10730;product=hypothetical protein;protein_id=UUF00103.1;transl_table=11 CP098602.1 Genbank gene 2429949 2430791 . + . ID=gene-NDY24_10735;Name=NDY24_10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10735 CP098602.1 GeneMarkS-2+ CDS 2429949 2430791 . + 0 ID=cds-UUF00104.1;Parent=gene-NDY24_10735;Dbxref=NCBI_GP:UUF00104.1;Name=UUF00104.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_10735;product=hypothetical protein;protein_id=UUF00104.1;transl_table=11 CP098602.1 Genbank gene 2431011 2431343 . + . ID=gene-NDY24_10740;Name=NDY24_10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10740 CP098602.1 GeneMarkS-2+ CDS 2431011 2431343 . + 0 ID=cds-UUF00105.1;Parent=gene-NDY24_10740;Dbxref=NCBI_GP:UUF00105.1;Name=UUF00105.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_10740;product=hypothetical protein;protein_id=UUF00105.1;transl_table=11 CP098602.1 Genbank pseudogene 2431550 2432260 . + . ID=gene-NDY24_10745;Name=NDY24_10745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_10745;pseudo=true CP098602.1 Protein Homology CDS 2431550 2432260 . + 0 ID=cds-NDY24_10745;Parent=gene-NDY24_10745;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024565.2;locus_tag=NDY24_10745;product=AAA family ATPase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2432358 2433440 . + . ID=gene-NDY24_10750;Name=NDY24_10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10750 CP098602.1 Protein Homology CDS 2432358 2433440 . + 0 ID=cds-UUF00365.1;Parent=gene-NDY24_10750;Dbxref=NCBI_GP:UUF00365.1;Name=UUF00365.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024565.2;locus_tag=NDY24_10750;product=AAA family ATPase;protein_id=UUF00365.1;transl_table=11 CP098602.1 Genbank pseudogene 2433425 2433853 . + . ID=gene-NDY24_10755;Name=NDY24_10755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_10755;pseudo=true CP098602.1 Protein Homology CDS 2433425 2433853 . + 0 ID=cds-NDY24_10755;Parent=gene-NDY24_10755;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024565.2;locus_tag=NDY24_10755;product=AAA family ATPase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2434284 2435348 . + . ID=gene-NDY24_10760;Name=NDY24_10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10760 CP098602.1 Protein Homology CDS 2434284 2435348 . + 0 ID=cds-UUF00366.1;Parent=gene-NDY24_10760;Dbxref=NCBI_GP:UUF00366.1;Name=UUF00366.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=NDY24_10760;product=IS3 family transposase;protein_id=UUF00366.1;transl_table=11 CP098602.1 Genbank gene 2435448 2435672 . + . ID=gene-NDY24_10765;Name=NDY24_10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10765 CP098602.1 Protein Homology CDS 2435448 2435672 . + 0 ID=cds-UUF00106.1;Parent=gene-NDY24_10765;Dbxref=NCBI_GP:UUF00106.1;Name=UUF00106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451691.1;locus_tag=NDY24_10765;product=hypothetical protein;protein_id=UUF00106.1;transl_table=11 CP098602.1 Genbank pseudogene 2436062 2437949 . - . ID=gene-NDY24_10770;Name=NDY24_10770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_10770;pseudo=true CP098602.1 Protein Homology CDS 2436062 2437949 . - 0 ID=cds-NDY24_10770;Parent=gene-NDY24_10770;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449189.1;locus_tag=NDY24_10770;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2437966 2438496 . - . ID=gene-NDY24_10775;Name=NDY24_10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10775 CP098602.1 Protein Homology CDS 2437966 2438496 . - 0 ID=cds-UUF00107.1;Parent=gene-NDY24_10775;Dbxref=NCBI_GP:UUF00107.1;Name=UUF00107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449190.1;locus_tag=NDY24_10775;product=hypothetical protein;protein_id=UUF00107.1;transl_table=11 CP098602.1 Genbank gene 2438717 2439382 . - . ID=gene-NDY24_10780;Name=NDY24_10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10780 CP098602.1 Protein Homology CDS 2438717 2439382 . - 0 ID=cds-UUF00367.1;Parent=gene-NDY24_10780;Dbxref=NCBI_GP:UUF00367.1;Name=UUF00367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016944713.1;locus_tag=NDY24_10780;product=hypothetical protein;protein_id=UUF00367.1;transl_table=11 CP098602.1 Genbank gene 2439497 2439718 . - . ID=gene-NDY24_10785;Name=NDY24_10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10785 CP098602.1 Protein Homology CDS 2439497 2439718 . - 0 ID=cds-UUF00108.1;Parent=gene-NDY24_10785;Dbxref=NCBI_GP:UUF00108.1;Name=UUF00108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449192.1;locus_tag=NDY24_10785;product=hypothetical protein;protein_id=UUF00108.1;transl_table=11 CP098602.1 Genbank gene 2440330 2440680 . + . ID=gene-NDY24_10790;Name=NDY24_10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10790 CP098602.1 Protein Homology CDS 2440330 2440680 . + 0 ID=cds-UUF00109.1;Parent=gene-NDY24_10790;Dbxref=NCBI_GP:UUF00109.1;Name=UUF00109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809755.1;locus_tag=NDY24_10790;product=type I toxin-antitoxin system SymE family toxin;protein_id=UUF00109.1;transl_table=11 CP098602.1 Genbank gene 2440794 2441018 . + . ID=gene-NDY24_10795;Name=NDY24_10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10795 CP098602.1 Protein Homology CDS 2440794 2441018 . + 0 ID=cds-UUF00110.1;Parent=gene-NDY24_10795;Dbxref=NCBI_GP:UUF00110.1;Name=UUF00110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451691.1;locus_tag=NDY24_10795;product=hypothetical protein;protein_id=UUF00110.1;transl_table=11 CP098602.1 Genbank gene 2441697 2442218 . + . ID=gene-NDY24_10800;Name=NDY24_10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10800 CP098602.1 GeneMarkS-2+ CDS 2441697 2442218 . + 0 ID=cds-UUF00111.1;Parent=gene-NDY24_10800;Dbxref=NCBI_GP:UUF00111.1;Name=UUF00111.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_10800;product=hypothetical protein;protein_id=UUF00111.1;transl_table=11 CP098602.1 Genbank gene 2442575 2442994 . + . ID=gene-NDY24_10805;Name=NDY24_10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10805 CP098602.1 Protein Homology CDS 2442575 2442994 . + 0 ID=cds-UUF00112.1;Parent=gene-NDY24_10805;Dbxref=NCBI_GP:UUF00112.1;Name=UUF00112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902939.1;locus_tag=NDY24_10805;product=hypothetical protein;protein_id=UUF00112.1;transl_table=11 CP098602.1 Genbank gene 2443263 2443709 . - . ID=gene-NDY24_10810;Name=NDY24_10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10810 CP098602.1 Protein Homology CDS 2443263 2443709 . - 0 ID=cds-UUF00113.1;Parent=gene-NDY24_10810;Dbxref=NCBI_GP:UUF00113.1;Name=UUF00113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574041.1;locus_tag=NDY24_10810;product=hypothetical protein;protein_id=UUF00113.1;transl_table=11 CP098602.1 Genbank pseudogene 2443813 2445709 . - . ID=gene-NDY24_10815;Name=NDY24_10815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_10815;pseudo=true CP098602.1 Protein Homology CDS 2443813 2445709 . - 0 ID=cds-NDY24_10815;Parent=gene-NDY24_10815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449189.1;locus_tag=NDY24_10815;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2445730 2446380 . - . ID=gene-NDY24_10820;Name=NDY24_10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10820 CP098602.1 Protein Homology CDS 2445730 2446380 . - 0 ID=cds-UUF00114.1;Parent=gene-NDY24_10820;Dbxref=NCBI_GP:UUF00114.1;Name=UUF00114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050086.1;locus_tag=NDY24_10820;product=hypothetical protein;protein_id=UUF00114.1;transl_table=11 CP098602.1 Genbank gene 2446479 2447183 . - . ID=gene-NDY24_10825;Name=NDY24_10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10825 CP098602.1 GeneMarkS-2+ CDS 2446479 2447183 . - 0 ID=cds-UUF00115.1;Parent=gene-NDY24_10825;Dbxref=NCBI_GP:UUF00115.1;Name=UUF00115.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_10825;product=hypothetical protein;protein_id=UUF00115.1;transl_table=11 CP098602.1 Genbank gene 2447257 2447451 . - . ID=gene-NDY24_10830;Name=NDY24_10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10830 CP098602.1 GeneMarkS-2+ CDS 2447257 2447451 . - 0 ID=cds-UUF00116.1;Parent=gene-NDY24_10830;Dbxref=NCBI_GP:UUF00116.1;Name=UUF00116.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_10830;product=hypothetical protein;protein_id=UUF00116.1;transl_table=11 CP098602.1 Genbank gene 2447587 2447775 . - . ID=gene-NDY24_10835;Name=NDY24_10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10835 CP098602.1 Protein Homology CDS 2447587 2447775 . - 0 ID=cds-UUF00117.1;Parent=gene-NDY24_10835;Dbxref=NCBI_GP:UUF00117.1;Name=UUF00117.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012371.2;locus_tag=NDY24_10835;product=serine hydrolase;protein_id=UUF00117.1;transl_table=11 CP098602.1 Genbank gene 2447832 2448575 . - . ID=gene-NDY24_10840;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=NDY24_10840 CP098602.1 Protein Homology CDS 2447832 2448575 . - 0 ID=cds-UUF00118.1;Parent=gene-NDY24_10840;Dbxref=NCBI_GP:UUF00118.1;Name=UUF00118.1;Ontology_term=GO:0005524;gbkey=CDS;gene=istB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966719.1;locus_tag=NDY24_10840;product=IS21-like element helper ATPase IstB;protein_id=UUF00118.1;transl_table=11 CP098602.1 Genbank gene 2448591 2450126 . - . ID=gene-NDY24_10845;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=NDY24_10845 CP098602.1 Protein Homology CDS 2448591 2450126 . - 0 ID=cds-UUF00119.1;Parent=gene-NDY24_10845;Dbxref=NCBI_GP:UUF00119.1;Name=UUF00119.1;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966720.1;locus_tag=NDY24_10845;product=IS21 family transposase;protein_id=UUF00119.1;transl_table=11 CP098602.1 Genbank gene 2450123 2450314 . - . ID=gene-NDY24_10850;Name=NDY24_10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10850 CP098602.1 GeneMarkS-2+ CDS 2450123 2450314 . - 0 ID=cds-UUF00120.1;Parent=gene-NDY24_10850;Dbxref=NCBI_GP:UUF00120.1;Name=UUF00120.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_10850;product=hypothetical protein;protein_id=UUF00120.1;transl_table=11 CP098602.1 Genbank gene 2450409 2451446 . + . ID=gene-NDY24_10855;Name=NDY24_10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10855 CP098602.1 Protein Homology CDS 2450409 2451446 . + 0 ID=cds-UUF00121.1;Parent=gene-NDY24_10855;Dbxref=NCBI_GP:UUF00121.1;Name=UUF00121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966722.1;locus_tag=NDY24_10855;product=hypothetical protein;protein_id=UUF00121.1;transl_table=11 CP098602.1 Genbank gene 2452430 2452900 . + . ID=gene-NDY24_10860;Name=NDY24_10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10860 CP098602.1 GeneMarkS-2+ CDS 2452430 2452900 . + 0 ID=cds-UUF00122.1;Parent=gene-NDY24_10860;Dbxref=NCBI_GP:UUF00122.1;Name=UUF00122.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_10860;product=hypothetical protein;protein_id=UUF00122.1;transl_table=11 CP098602.1 Genbank gene 2453204 2453434 . - . ID=gene-NDY24_10865;Name=NDY24_10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10865 CP098602.1 GeneMarkS-2+ CDS 2453204 2453434 . - 0 ID=cds-UUF00123.1;Parent=gene-NDY24_10865;Dbxref=NCBI_GP:UUF00123.1;Name=UUF00123.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_10865;product=hypothetical protein;protein_id=UUF00123.1;transl_table=11 CP098602.1 Genbank pseudogene 2453493 2455581 . + . ID=gene-NDY24_10870;Name=NDY24_10870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_10870;pseudo=true CP098602.1 Protein Homology CDS 2453493 2455581 . + 0 ID=cds-NDY24_10870;Parent=gene-NDY24_10870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368375.1;locus_tag=NDY24_10870;product=type III effector;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2455838 2456716 . + . ID=gene-NDY24_10875;Name=NDY24_10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10875 CP098602.1 Protein Homology CDS 2455838 2456716 . + 0 ID=cds-UUF00124.1;Parent=gene-NDY24_10875;Dbxref=NCBI_GP:UUF00124.1;Name=UUF00124.1;Ontology_term=GO:0006471;gbkey=CDS;go_process=protein ADP-ribosylation|0006471||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003491086.1;locus_tag=NDY24_10875;product=ADP-ribosyltransferase domain-containing protein;protein_id=UUF00124.1;transl_table=11 CP098602.1 Genbank gene 2457266 2457520 . - . ID=gene-NDY24_10880;Name=NDY24_10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10880 CP098602.1 Protein Homology CDS 2457266 2457520 . - 0 ID=cds-UUF00125.1;Parent=gene-NDY24_10880;Dbxref=NCBI_GP:UUF00125.1;Name=UUF00125.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012371.2;locus_tag=NDY24_10880;product=beta-lactamase family protein;protein_id=UUF00125.1;transl_table=11 CP098602.1 Genbank gene 2457438 2458301 . - . ID=gene-NDY24_10885;Name=NDY24_10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10885 CP098602.1 Protein Homology CDS 2457438 2458301 . - 0 ID=cds-UUF00126.1;Parent=gene-NDY24_10885;Dbxref=NCBI_GP:UUF00126.1;Name=UUF00126.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012371.2;locus_tag=NDY24_10885;product=beta-lactamase family protein;protein_id=UUF00126.1;transl_table=11 CP098602.1 Genbank gene 2458323 2458607 . - . ID=gene-NDY24_10890;Name=NDY24_10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10890 CP098602.1 GeneMarkS-2+ CDS 2458323 2458607 . - 0 ID=cds-UUF00127.1;Parent=gene-NDY24_10890;Dbxref=NCBI_GP:UUF00127.1;Name=UUF00127.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_10890;product=hypothetical protein;protein_id=UUF00127.1;transl_table=11 CP098602.1 Genbank gene 2458966 2459154 . - . ID=gene-NDY24_10895;Name=NDY24_10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10895 CP098602.1 Protein Homology CDS 2458966 2459154 . - 0 ID=cds-UUF00128.1;Parent=gene-NDY24_10895;Dbxref=NCBI_GP:UUF00128.1;Name=UUF00128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050089.1;locus_tag=NDY24_10895;product=CsbD family protein;protein_id=UUF00128.1;transl_table=11 CP098602.1 Genbank gene 2459287 2460807 . - . ID=gene-NDY24_10900;Name=NDY24_10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10900 CP098602.1 Protein Homology CDS 2459287 2460807 . - 0 ID=cds-UUF00129.1;Parent=gene-NDY24_10900;Dbxref=NCBI_GP:UUF00129.1;Name=UUF00129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451427.1;locus_tag=NDY24_10900;product=helix-turn-helix transcriptional regulator;protein_id=UUF00129.1;transl_table=11 CP098602.1 Genbank gene 2460971 2461954 . + . ID=gene-NDY24_10905;Name=NDY24_10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10905 CP098602.1 Protein Homology CDS 2460971 2461954 . + 0 ID=cds-UUF00130.1;Parent=gene-NDY24_10905;Dbxref=NCBI_GP:UUF00130.1;Name=UUF00130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451428.1;locus_tag=NDY24_10905;product=hypothetical protein;protein_id=UUF00130.1;transl_table=11 CP098602.1 Genbank gene 2462742 2463920 . - . ID=gene-NDY24_10910;Name=NDY24_10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10910 CP098602.1 Protein Homology CDS 2462742 2463920 . - 0 ID=cds-UUF00131.1;Parent=gene-NDY24_10910;Dbxref=NCBI_GP:UUF00131.1;Name=UUF00131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159055.1;locus_tag=NDY24_10910;product=HDOD domain-containing protein;protein_id=UUF00131.1;transl_table=11 CP098602.1 Genbank gene 2464241 2464552 . - . ID=gene-NDY24_10915;Name=NDY24_10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10915 CP098602.1 Protein Homology CDS 2464241 2464552 . - 0 ID=cds-UUF00132.1;Parent=gene-NDY24_10915;Dbxref=NCBI_GP:UUF00132.1;Name=UUF00132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257045.1;locus_tag=NDY24_10915;product=hypothetical protein;protein_id=UUF00132.1;transl_table=11 CP098602.1 Genbank gene 2464549 2465613 . - . ID=gene-NDY24_10920;Name=NDY24_10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10920 CP098602.1 Protein Homology CDS 2464549 2465613 . - 0 ID=cds-UUF00133.1;Parent=gene-NDY24_10920;Dbxref=NCBI_GP:UUF00133.1;Name=UUF00133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163989.1;locus_tag=NDY24_10920;product=M4 family metallopeptidase;protein_id=UUF00133.1;transl_table=11 CP098602.1 Genbank gene 2465724 2466380 . - . ID=gene-NDY24_10925;Name=NDY24_10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10925 CP098602.1 Protein Homology CDS 2465724 2466380 . - 0 ID=cds-UUF00134.1;Parent=gene-NDY24_10925;Dbxref=NCBI_GP:UUF00134.1;Name=UUF00134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303231.1;locus_tag=NDY24_10925;product=SDR family oxidoreductase;protein_id=UUF00134.1;transl_table=11 CP098602.1 Genbank gene 2466617 2467069 . + . ID=gene-NDY24_10930;Name=NDY24_10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10930 CP098602.1 Protein Homology CDS 2466617 2467069 . + 0 ID=cds-UUF00135.1;Parent=gene-NDY24_10930;Dbxref=NCBI_GP:UUF00135.1;Name=UUF00135.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453260.1;locus_tag=NDY24_10930;product=NUDIX domain-containing protein;protein_id=UUF00135.1;transl_table=11 CP098602.1 Genbank gene 2467135 2468274 . + . ID=gene-NDY24_10935;Name=NDY24_10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10935 CP098602.1 Protein Homology CDS 2467135 2468274 . + 0 ID=cds-UUF00136.1;Parent=gene-NDY24_10935;Dbxref=NCBI_GP:UUF00136.1;Name=UUF00136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116523.1;locus_tag=NDY24_10935;product=alpha/beta hydrolase;protein_id=UUF00136.1;transl_table=11 CP098602.1 Genbank gene 2468377 2468775 . + . ID=gene-NDY24_10940;Name=NDY24_10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10940 CP098602.1 Protein Homology CDS 2468377 2468775 . + 0 ID=cds-UUF00137.1;Parent=gene-NDY24_10940;Dbxref=NCBI_GP:UUF00137.1;Name=UUF00137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809798.1;locus_tag=NDY24_10940;product=host attachment family protein;protein_id=UUF00137.1;transl_table=11 CP098602.1 Genbank gene 2468794 2469138 . + . ID=gene-NDY24_10945;Name=NDY24_10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10945 CP098602.1 Protein Homology CDS 2468794 2469138 . + 0 ID=cds-UUF00138.1;Parent=gene-NDY24_10945;Dbxref=NCBI_GP:UUF00138.1;Name=UUF00138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453263.1;locus_tag=NDY24_10945;product=thioredoxin family protein;protein_id=UUF00138.1;transl_table=11 CP098602.1 Genbank gene 2469464 2470954 . + . ID=gene-NDY24_10950;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=NDY24_10950 CP098602.1 Protein Homology CDS 2469464 2470954 . + 0 ID=cds-UUF00368.1;Parent=gene-NDY24_10950;Dbxref=NCBI_GP:UUF00368.1;Name=UUF00368.1;Ontology_term=GO:0055085,GO:0022857,GO:0016021;gbkey=CDS;gene=proP;go_component=integral component of membrane|0016021||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487917.1;locus_tag=NDY24_10950;product=glycine betaine/L-proline transporter ProP;protein_id=UUF00368.1;transl_table=11 CP098602.1 Genbank gene 2470997 2471446 . - . ID=gene-NDY24_10955;Name=NDY24_10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10955 CP098602.1 Protein Homology CDS 2470997 2471446 . - 0 ID=cds-UUF00139.1;Parent=gene-NDY24_10955;Dbxref=NCBI_GP:UUF00139.1;Name=UUF00139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453265.1;locus_tag=NDY24_10955;product=SRPBCC domain-containing protein;protein_id=UUF00139.1;transl_table=11 CP098602.1 Genbank gene 2471618 2472412 . + . ID=gene-NDY24_10960;Name=NDY24_10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10960 CP098602.1 Protein Homology CDS 2471618 2472412 . + 0 ID=cds-UUF00369.1;Parent=gene-NDY24_10960;Dbxref=NCBI_GP:UUF00369.1;Name=UUF00369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116524.1;locus_tag=NDY24_10960;product=EcsC family protein;protein_id=UUF00369.1;transl_table=11 CP098602.1 Genbank pseudogene 2473035 2473677 . + . ID=gene-NDY24_10965;Name=NDY24_10965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_10965;pseudo=true CP098602.1 Protein Homology CDS 2473035 2473677 . + 0 ID=cds-NDY24_10965;Parent=gene-NDY24_10965;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035344.1;locus_tag=NDY24_10965;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2473964 2475733 . - . ID=gene-NDY24_10970;Name=NDY24_10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10970 CP098602.1 Protein Homology CDS 2473964 2475733 . - 0 ID=cds-UUF00140.1;Parent=gene-NDY24_10970;Dbxref=NCBI_GP:UUF00140.1;Name=UUF00140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903912.1;locus_tag=NDY24_10970;product=carboxypeptidase regulatory-like domain-containing protein;protein_id=UUF00140.1;transl_table=11 CP098602.1 Genbank gene 2475730 2478006 . - . ID=gene-NDY24_10975;Name=NDY24_10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10975 CP098602.1 Protein Homology CDS 2475730 2478006 . - 0 ID=cds-UUF00141.1;Parent=gene-NDY24_10975;Dbxref=NCBI_GP:UUF00141.1;Name=UUF00141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157979.1;locus_tag=NDY24_10975;product=DUF4175 domain-containing protein;protein_id=UUF00141.1;transl_table=11 CP098602.1 Genbank gene 2478003 2479193 . - . ID=gene-NDY24_10980;Name=NDY24_10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10980 CP098602.1 Protein Homology CDS 2478003 2479193 . - 0 ID=cds-UUF00142.1;Parent=gene-NDY24_10980;Dbxref=NCBI_GP:UUF00142.1;Name=UUF00142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157978.1;locus_tag=NDY24_10980;product=BatA domain-containing protein;protein_id=UUF00142.1;transl_table=11 CP098602.1 Genbank pseudogene 2479264 2480160 . - . ID=gene-NDY24_10985;Name=NDY24_10985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_10985;pseudo=true CP098602.1 Protein Homology CDS 2479264 2480160 . - 0 ID=cds-NDY24_10985;Parent=gene-NDY24_10985;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157977.1;locus_tag=NDY24_10985;product=DUF58 domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2480174 2481166 . - . ID=gene-NDY24_10990;Name=NDY24_10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10990 CP098602.1 Protein Homology CDS 2480174 2481166 . - 0 ID=cds-UUF00143.1;Parent=gene-NDY24_10990;Dbxref=NCBI_GP:UUF00143.1;Name=UUF00143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916000.1;locus_tag=NDY24_10990;product=MoxR family ATPase;protein_id=UUF00143.1;transl_table=11 CP098602.1 Genbank gene 2481268 2481939 . - . ID=gene-NDY24_10995;Name=NDY24_10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_10995 CP098602.1 Protein Homology CDS 2481268 2481939 . - 0 ID=cds-UUF00370.1;Parent=gene-NDY24_10995;Dbxref=NCBI_GP:UUF00370.1;Name=UUF00370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930104.1;locus_tag=NDY24_10995;product=DUF4159 domain-containing protein;protein_id=UUF00370.1;transl_table=11 CP098602.1 Genbank gene 2482084 2483418 . - . ID=gene-NDY24_11000;Name=NDY24_11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11000 CP098602.1 Protein Homology CDS 2482084 2483418 . - 0 ID=cds-UUF00144.1;Parent=gene-NDY24_11000;Dbxref=NCBI_GP:UUF00144.1;Name=UUF00144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007962710.1;locus_tag=NDY24_11000;product=TldD/PmbA family protein;protein_id=UUF00144.1;transl_table=11 CP098602.1 Genbank gene 2483434 2485068 . - . ID=gene-NDY24_11005;Name=NDY24_11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11005 CP098602.1 Protein Homology CDS 2483434 2485068 . - 0 ID=cds-UUF00145.1;Parent=gene-NDY24_11005;Dbxref=NCBI_GP:UUF00145.1;Name=UUF00145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995434.1;locus_tag=NDY24_11005;product=TldD/PmbA family protein;protein_id=UUF00145.1;transl_table=11 CP098602.1 Genbank gene 2487062 2488690 . - . ID=gene-NDY24_11010;Name=NDY24_11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11010 CP098602.1 Protein Homology CDS 2487062 2488690 . - 0 ID=cds-UUF00146.1;Parent=gene-NDY24_11010;Dbxref=NCBI_GP:UUF00146.1;Name=UUF00146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995434.1;locus_tag=NDY24_11010;product=TldD/PmbA family protein;protein_id=UUF00146.1;transl_table=11 CP098602.1 Genbank gene 2488892 2489848 . - . ID=gene-NDY24_11015;Name=NDY24_11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11015 CP098602.1 Protein Homology CDS 2488892 2489848 . - 0 ID=cds-UUF00147.1;Parent=gene-NDY24_11015;Dbxref=NCBI_GP:UUF00147.1;Name=UUF00147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158343.1;locus_tag=NDY24_11015;product=AraC family transcriptional regulator;protein_id=UUF00147.1;transl_table=11 CP098602.1 Genbank gene 2489929 2490729 . + . ID=gene-NDY24_11020;Name=NDY24_11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11020 CP098602.1 Protein Homology CDS 2489929 2490729 . + 0 ID=cds-UUF00148.1;Parent=gene-NDY24_11020;Dbxref=NCBI_GP:UUF00148.1;Name=UUF00148.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024109.2;locus_tag=NDY24_11020;product=alpha/beta fold hydrolase;protein_id=UUF00148.1;transl_table=11 CP098602.1 Genbank gene 2490732 2491121 . + . ID=gene-NDY24_11025;Name=NDY24_11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11025 CP098602.1 Protein Homology CDS 2490732 2491121 . + 0 ID=cds-UUF00371.1;Parent=gene-NDY24_11025;Dbxref=NCBI_GP:UUF00371.1;Name=UUF00371.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013304.2;locus_tag=NDY24_11025;product=MAPEG family protein;protein_id=UUF00371.1;transl_table=11 CP098602.1 Genbank gene 2491259 2492617 . + . ID=gene-NDY24_11030;Name=NDY24_11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11030 CP098602.1 GeneMarkS-2+ CDS 2491259 2492617 . + 0 ID=cds-UUF00149.1;Parent=gene-NDY24_11030;Dbxref=NCBI_GP:UUF00149.1;Name=UUF00149.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_11030;product=hypothetical protein;protein_id=UUF00149.1;transl_table=11 CP098602.1 Genbank gene 2493175 2493642 . - . ID=gene-NDY24_11035;Name=NDY24_11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11035 CP098602.1 Protein Homology CDS 2493175 2493642 . - 0 ID=cds-UUF00372.1;Parent=gene-NDY24_11035;Dbxref=NCBI_GP:UUF00372.1;Name=UUF00372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157969.1;locus_tag=NDY24_11035;product=LuxR family transcriptional regulator;protein_id=UUF00372.1;transl_table=11 CP098602.1 Genbank gene 2493951 2494967 . - . ID=gene-NDY24_11040;Name=NDY24_11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11040 CP098602.1 Protein Homology CDS 2493951 2494967 . - 0 ID=cds-UUF00150.1;Parent=gene-NDY24_11040;Dbxref=NCBI_GP:UUF00150.1;Name=UUF00150.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506031.1;locus_tag=NDY24_11040;product=class 1 fructose-bisphosphatase;protein_id=UUF00150.1;transl_table=11 CP098602.1 Genbank gene 2495219 2496421 . - . ID=gene-NDY24_11045;Name=NDY24_11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11045 CP098602.1 Protein Homology CDS 2495219 2496421 . - 0 ID=cds-UUF00151.1;Parent=gene-NDY24_11045;Dbxref=NCBI_GP:UUF00151.1;Name=UUF00151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849085.1;locus_tag=NDY24_11045;product=aspartate/tyrosine/aromatic aminotransferase;protein_id=UUF00151.1;transl_table=11 CP098602.1 Genbank gene 2496578 2498713 . + . ID=gene-NDY24_11050;Name=NDY24_11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11050 CP098602.1 Protein Homology CDS 2496578 2498713 . + 0 ID=cds-UUF00152.1;Parent=gene-NDY24_11050;Dbxref=NCBI_GP:UUF00152.1;Name=UUF00152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112434.1;locus_tag=NDY24_11050;product=TonB-dependent receptor;protein_id=UUF00152.1;transl_table=11 CP098602.1 Genbank gene 2498862 2499161 . + . ID=gene-NDY24_11055;Name=NDY24_11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11055 CP098602.1 Protein Homology CDS 2498862 2499161 . + 0 ID=cds-UUF00153.1;Parent=gene-NDY24_11055;Dbxref=NCBI_GP:UUF00153.1;Name=UUF00153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450171.1;locus_tag=NDY24_11055;product=hypothetical protein;protein_id=UUF00153.1;transl_table=11 CP098602.1 Genbank gene 2499289 2499669 . + . ID=gene-NDY24_11060;Name=NDY24_11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11060 CP098602.1 Protein Homology CDS 2499289 2499669 . + 0 ID=cds-UUF00154.1;Parent=gene-NDY24_11060;Dbxref=NCBI_GP:UUF00154.1;Name=UUF00154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450226.1;locus_tag=NDY24_11060;product=cupin domain-containing protein;protein_id=UUF00154.1;transl_table=11 CP098602.1 Genbank gene 2500038 2500517 . + . ID=gene-NDY24_11065;Name=NDY24_11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11065 CP098602.1 Protein Homology CDS 2500038 2500517 . + 0 ID=cds-UUF00155.1;Parent=gene-NDY24_11065;Dbxref=NCBI_GP:UUF00155.1;Name=UUF00155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449979.1;locus_tag=NDY24_11065;product=hypothetical protein;protein_id=UUF00155.1;transl_table=11 CP098602.1 Genbank gene 2500757 2502286 . + . ID=gene-NDY24_11070;Name=NDY24_11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11070 CP098602.1 Protein Homology CDS 2500757 2502286 . + 0 ID=cds-UUF00156.1;Parent=gene-NDY24_11070;Dbxref=NCBI_GP:UUF00156.1;Name=UUF00156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035359.1;locus_tag=NDY24_11070;product=aldehyde dehydrogenase family protein;protein_id=UUF00156.1;transl_table=11 CP098602.1 Genbank pseudogene 2502336 2502455 . - . ID=gene-NDY24_11075;Name=NDY24_11075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_11075;pseudo=true CP098602.1 Protein Homology CDS 2502336 2502455 . - 0 ID=cds-NDY24_11075;Parent=gene-NDY24_11075;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460690.1;locus_tag=NDY24_11075;product=SDR family oxidoreductase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2502560 2502895 . + . ID=gene-NDY24_11080;Name=NDY24_11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11080 CP098602.1 Protein Homology CDS 2502560 2502895 . + 0 ID=cds-UUF00157.1;Parent=gene-NDY24_11080;Dbxref=NCBI_GP:UUF00157.1;Name=UUF00157.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=NDY24_11080;product=substrate-binding domain-containing protein;protein_id=UUF00157.1;transl_table=11 CP098602.1 Genbank gene 2502942 2503388 . + . ID=gene-NDY24_11085;Name=NDY24_11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11085 CP098602.1 Protein Homology CDS 2502942 2503388 . + 0 ID=cds-UUF00158.1;Parent=gene-NDY24_11085;Dbxref=NCBI_GP:UUF00158.1;Name=UUF00158.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014173.2;locus_tag=NDY24_11085;product=Rrf2 family transcriptional regulator;protein_id=UUF00158.1;transl_table=11 CP098602.1 Genbank gene 2503532 2504176 . + . ID=gene-NDY24_11090;Name=NDY24_11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11090 CP098602.1 Protein Homology CDS 2503532 2504176 . + 0 ID=cds-UUF00159.1;Parent=gene-NDY24_11090;Dbxref=NCBI_GP:UUF00159.1;Name=UUF00159.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015411.2;locus_tag=NDY24_11090;product=NADPH-dependent F420 reductase;protein_id=UUF00159.1;transl_table=11 CP098602.1 Genbank gene 2504404 2504808 . + . ID=gene-NDY24_11095;Name=NDY24_11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11095 CP098602.1 Protein Homology CDS 2504404 2504808 . + 0 ID=cds-UUF00160.1;Parent=gene-NDY24_11095;Dbxref=NCBI_GP:UUF00160.1;Name=UUF00160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035360.1;locus_tag=NDY24_11095;product=DUF779 domain-containing protein;protein_id=UUF00160.1;transl_table=11 CP098602.1 Genbank gene 2504859 2505038 . - . ID=gene-NDY24_11100;Name=NDY24_11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11100 CP098602.1 Protein Homology CDS 2504859 2505038 . - 0 ID=cds-UUF00161.1;Parent=gene-NDY24_11100;Dbxref=NCBI_GP:UUF00161.1;Name=UUF00161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902913.1;locus_tag=NDY24_11100;product=hypothetical protein;protein_id=UUF00161.1;transl_table=11 CP098602.1 Genbank gene 2505190 2506137 . + . ID=gene-NDY24_11105;Name=NDY24_11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11105 CP098602.1 Protein Homology CDS 2505190 2506137 . + 0 ID=cds-UUF00162.1;Parent=gene-NDY24_11105;Dbxref=NCBI_GP:UUF00162.1;Name=UUF00162.1;Ontology_term=GO:0006303,GO:0045027;gbkey=CDS;go_function=DNA end binding|0045027||IEA;go_process=double-strand break repair via nonhomologous end joining|0006303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157961.1;locus_tag=NDY24_11105;product=Ku protein;protein_id=UUF00162.1;transl_table=11 CP098602.1 Genbank gene 2506146 2508905 . + . ID=gene-NDY24_11110;Name=ligD;gbkey=Gene;gene=ligD;gene_biotype=protein_coding;locus_tag=NDY24_11110 CP098602.1 Protein Homology CDS 2506146 2508905 . + 0 ID=cds-UUF00163.1;Parent=gene-NDY24_11110;Dbxref=NCBI_GP:UUF00163.1;Name=UUF00163.1;Ontology_term=GO:0006303;gbkey=CDS;gene=ligD;go_process=double-strand break repair via nonhomologous end joining|0006303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449984.1;locus_tag=NDY24_11110;product=DNA ligase D;protein_id=UUF00163.1;transl_table=11 CP098602.1 Genbank gene 2508950 2509026 . + . ID=gene-NDY24_11115;Name=NDY24_11115;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_11115 CP098602.1 cmsearch ncRNA 2508950 2509026 . + . ID=rna-NDY24_11115;Parent=gene-NDY24_11115;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_11115;product=sX9 sRNA CP098602.1 cmsearch exon 2508950 2509026 . + . ID=exon-NDY24_11115-1;Parent=rna-NDY24_11115;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_11115;product=sX9 sRNA CP098602.1 Genbank gene 2509403 2510563 . - . ID=gene-NDY24_11120;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=NDY24_11120 CP098602.1 Protein Homology CDS 2509403 2510563 . - 0 ID=cds-UUF00164.1;Parent=gene-NDY24_11120;Dbxref=NCBI_GP:UUF00164.1;Name=UUF00164.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573929.1;locus_tag=NDY24_11120;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=UUF00164.1;transl_table=11 CP098602.1 Genbank pseudogene 2510797 2512315 . - . ID=gene-NDY24_11125;Name=NDY24_11125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_11125;pseudo=true CP098602.1 Protein Homology CDS 2510797 2512315 . - 0 ID=cds-NDY24_11125;Parent=gene-NDY24_11125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005411239.1;locus_tag=NDY24_11125;product=carotenoid oxygenase family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2512345 2512767 . - . ID=gene-NDY24_11130;Name=NDY24_11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11130 CP098602.1 Protein Homology CDS 2512345 2512767 . - 0 ID=cds-UUF00165.1;Parent=gene-NDY24_11130;Dbxref=NCBI_GP:UUF00165.1;Name=UUF00165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005996266.1;locus_tag=NDY24_11130;product=DUF2141 domain-containing protein;protein_id=UUF00165.1;transl_table=11 CP098602.1 Genbank gene 2512985 2513548 . - . ID=gene-NDY24_11135;Name=NDY24_11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11135 CP098602.1 Protein Homology CDS 2512985 2513548 . - 0 ID=cds-UUF00166.1;Parent=gene-NDY24_11135;Dbxref=NCBI_GP:UUF00166.1;Name=UUF00166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165246.1;locus_tag=NDY24_11135;product=phosphatidylethanolamine N-methyltransferase family protein;protein_id=UUF00166.1;transl_table=11 CP098602.1 Genbank gene 2513581 2514807 . + . ID=gene-NDY24_11140;Name=NDY24_11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11140 CP098602.1 Protein Homology CDS 2513581 2514807 . + 0 ID=cds-UUF00167.1;Parent=gene-NDY24_11140;Dbxref=NCBI_GP:UUF00167.1;Name=UUF00167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964736.1;locus_tag=NDY24_11140;product=sensor histidine kinase;protein_id=UUF00167.1;transl_table=11 CP098602.1 Genbank gene 2514804 2515436 . + . ID=gene-NDY24_11145;Name=NDY24_11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11145 CP098602.1 Protein Homology CDS 2514804 2515436 . + 0 ID=cds-UUF00168.1;Parent=gene-NDY24_11145;Dbxref=NCBI_GP:UUF00168.1;Name=UUF00168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161012.1;locus_tag=NDY24_11145;product=response regulator transcription factor;protein_id=UUF00168.1;transl_table=11 CP098602.1 Genbank pseudogene 2516176 2516376 . + . ID=gene-NDY24_11150;Name=NDY24_11150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_11150;pseudo=true CP098602.1 Protein Homology CDS 2516176 2516376 . + 0 ID=cds-NDY24_11150;Parent=gene-NDY24_11150;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154856.1;locus_tag=NDY24_11150;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2516776 2517168 . - . ID=gene-NDY24_11155;Name=NDY24_11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11155 CP098602.1 Protein Homology CDS 2516776 2517168 . - 0 ID=cds-UUF00169.1;Parent=gene-NDY24_11155;Dbxref=NCBI_GP:UUF00169.1;Name=UUF00169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050117.1;locus_tag=NDY24_11155;product=hypothetical protein;protein_id=UUF00169.1;transl_table=11 CP098602.1 Genbank gene 2517165 2520515 . - . ID=gene-NDY24_11160;Name=NDY24_11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11160 CP098602.1 Protein Homology CDS 2517165 2520515 . - 0 ID=cds-UUF00170.1;Parent=gene-NDY24_11160;Dbxref=NCBI_GP:UUF00170.1;Name=UUF00170.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154859.1;locus_tag=NDY24_11160;product=winged helix-turn-helix domain-containing protein;protein_id=UUF00170.1;transl_table=11 CP098602.1 Genbank gene 2520809 2522017 . + . ID=gene-NDY24_11165;Name=NDY24_11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11165 CP098602.1 Protein Homology CDS 2520809 2522017 . + 0 ID=cds-UUF00171.1;Parent=gene-NDY24_11165;Dbxref=NCBI_GP:UUF00171.1;Name=UUF00171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506054.1;locus_tag=NDY24_11165;product=trans-2-enoyl-CoA reductase family protein;protein_id=UUF00171.1;transl_table=11 CP098602.1 Genbank pseudogene 2522251 2522539 . + . ID=gene-NDY24_11170;Name=NDY24_11170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_11170;pseudo=true CP098602.1 Protein Homology CDS 2522251 2522539 . + 0 ID=cds-NDY24_11170;Parent=gene-NDY24_11170;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301942.1;locus_tag=NDY24_11170;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2522733 2523755 . - . ID=gene-NDY24_11175;Name=NDY24_11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11175 CP098602.1 Protein Homology CDS 2522733 2523755 . - 0 ID=cds-UUF00172.1;Parent=gene-NDY24_11175;Dbxref=NCBI_GP:UUF00172.1;Name=UUF00172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007970754.1;locus_tag=NDY24_11175;product=sugar kinase;protein_id=UUF00172.1;transl_table=11 CP098602.1 Genbank gene 2524043 2526790 . + . ID=gene-NDY24_11180;Name=NDY24_11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11180 CP098602.1 Protein Homology CDS 2524043 2526790 . + 0 ID=cds-UUF00173.1;Parent=gene-NDY24_11180;Dbxref=NCBI_GP:UUF00173.1;Name=UUF00173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007970752.1;locus_tag=NDY24_11180;product=TonB-dependent receptor;protein_id=UUF00173.1;transl_table=11 CP098602.1 Genbank gene 2527023 2530223 . + . ID=gene-NDY24_11185;Name=NDY24_11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11185 CP098602.1 Protein Homology CDS 2527023 2530223 . + 0 ID=cds-UUF00174.1;Parent=gene-NDY24_11185;Dbxref=NCBI_GP:UUF00174.1;Name=UUF00174.1;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237088.1;locus_tag=NDY24_11185;product=TonB-dependent receptor;protein_id=UUF00174.1;transl_table=11 CP098602.1 Genbank gene 2530236 2531213 . + . ID=gene-NDY24_11190;Name=NDY24_11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11190 CP098602.1 Protein Homology CDS 2530236 2531213 . + 0 ID=cds-UUF00175.1;Parent=gene-NDY24_11190;Dbxref=NCBI_GP:UUF00175.1;Name=UUF00175.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012436943.1;locus_tag=NDY24_11190;product=pectinesterase family protein;protein_id=UUF00175.1;transl_table=11 CP098602.1 Genbank gene 2531213 2532241 . + . ID=gene-NDY24_11195;Name=pelA;gbkey=Gene;gene=pelA;gene_biotype=protein_coding;locus_tag=NDY24_11195 CP098602.1 Protein Homology CDS 2531213 2532241 . + 0 ID=cds-UUF00176.1;Parent=gene-NDY24_11195;Dbxref=NCBI_GP:UUF00176.1;Name=UUF00176.1;Ontology_term=GO:0045490,GO:0030570;gbkey=CDS;gene=pelA;go_function=pectate lyase activity|0030570||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005996291.1;locus_tag=NDY24_11195;product=pectate lyase;protein_id=UUF00176.1;transl_table=11 CP098602.1 Genbank pseudogene 2532449 2536298 . + . ID=gene-NDY24_11200;Name=NDY24_11200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_11200;pseudo=true CP098602.1 Protein Homology CDS 2532449 2536298 . + 0 ID=cds-NDY24_11200;Parent=gene-NDY24_11200;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160455.1;locus_tag=NDY24_11200;product=LamG domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2536485 2536694 . + . ID=gene-NDY24_11205;Name=NDY24_11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11205 CP098602.1 Protein Homology CDS 2536485 2536694 . + 0 ID=cds-UUF00177.1;Parent=gene-NDY24_11205;Dbxref=NCBI_GP:UUF00177.1;Name=UUF00177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159762.1;locus_tag=NDY24_11205;product=hypothetical protein;protein_id=UUF00177.1;transl_table=11 CP098602.1 Genbank gene 2536830 2537138 . + . ID=gene-NDY24_11210;Name=NDY24_11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11210 CP098602.1 GeneMarkS-2+ CDS 2536830 2537138 . + 0 ID=cds-UUF00534.1;Parent=gene-NDY24_11210;Dbxref=NCBI_GP:UUF00534.1;Name=UUF00534.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_11210;product=hypothetical protein;protein_id=UUF00534.1;transl_table=11 CP098602.1 Genbank gene 2537192 2537392 . + . ID=gene-NDY24_11215;Name=NDY24_11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11215 CP098602.1 Protein Homology CDS 2537192 2537392 . + 0 ID=cds-UUF00178.1;Parent=gene-NDY24_11215;Dbxref=NCBI_GP:UUF00178.1;Name=UUF00178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015471549.1;locus_tag=NDY24_11215;product=KTSC domain-containing protein;protein_id=UUF00178.1;transl_table=11 CP098602.1 Genbank gene 2537790 2538263 . + . ID=gene-NDY24_11220;Name=NDY24_11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11220 CP098602.1 Protein Homology CDS 2537790 2538263 . + 0 ID=cds-UUF00179.1;Parent=gene-NDY24_11220;Dbxref=NCBI_GP:UUF00179.1;Name=UUF00179.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015332.2;locus_tag=NDY24_11220;product=hypothetical protein;protein_id=UUF00179.1;transl_table=11 CP098602.1 Genbank gene 2538646 2539080 . + . ID=gene-NDY24_11225;Name=NDY24_11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11225 CP098602.1 Protein Homology CDS 2538646 2539080 . + 0 ID=cds-UUF00180.1;Parent=gene-NDY24_11225;Dbxref=NCBI_GP:UUF00180.1;Name=UUF00180.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025056.2;locus_tag=NDY24_11225;product=toll/interleukin-1 receptor domain-containing protein;protein_id=UUF00180.1;transl_table=11 CP098602.1 Genbank gene 2539157 2539900 . + . ID=gene-NDY24_11230;Name=NDY24_11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11230 CP098602.1 Protein Homology CDS 2539157 2539900 . + 0 ID=cds-UUF00181.1;Parent=gene-NDY24_11230;Dbxref=NCBI_GP:UUF00181.1;Name=UUF00181.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025713.2;locus_tag=NDY24_11230;product=abortive infection family protein;protein_id=UUF00181.1;transl_table=11 CP098602.1 Genbank gene 2539968 2540678 . + . ID=gene-NDY24_11235;Name=NDY24_11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11235 CP098602.1 GeneMarkS-2+ CDS 2539968 2540678 . + 0 ID=cds-UUF00182.1;Parent=gene-NDY24_11235;Dbxref=NCBI_GP:UUF00182.1;Name=UUF00182.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_11235;product=hypothetical protein;protein_id=UUF00182.1;transl_table=11 CP098602.1 Genbank gene 2540974 2542425 . - . ID=gene-NDY24_11240;Name=NDY24_11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11240 CP098602.1 Protein Homology CDS 2540974 2542425 . - 0 ID=cds-UUF00183.1;Parent=gene-NDY24_11240;Dbxref=NCBI_GP:UUF00183.1;Name=UUF00183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012436950.1;locus_tag=NDY24_11240;product=hypothetical protein;protein_id=UUF00183.1;transl_table=11 CP098602.1 Genbank gene 2542700 2543110 . - . ID=gene-NDY24_11245;Name=NDY24_11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11245 CP098602.1 GeneMarkS-2+ CDS 2542700 2543110 . - 0 ID=cds-UUF00184.1;Parent=gene-NDY24_11245;Dbxref=NCBI_GP:UUF00184.1;Name=UUF00184.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_11245;product=hypothetical protein;protein_id=UUF00184.1;transl_table=11 CP098602.1 Genbank pseudogene 2543629 2543978 . + . ID=gene-NDY24_11250;Name=NDY24_11250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_11250;pseudo=true CP098602.1 Protein Homology CDS 2543629 2543978 . + 0 ID=cds-NDY24_11250;Parent=gene-NDY24_11250;Note=frameshifted;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009609272.1;locus_tag=NDY24_11250;product=SymE family type I addiction module toxin;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2544090 2544326 . + . ID=gene-NDY24_11255;Name=NDY24_11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11255 CP098602.1 Protein Homology CDS 2544090 2544326 . + 0 ID=cds-UUF00185.1;Parent=gene-NDY24_11255;Dbxref=NCBI_GP:UUF00185.1;Name=UUF00185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448538.1;locus_tag=NDY24_11255;product=hypothetical protein;protein_id=UUF00185.1;transl_table=11 CP098602.1 Genbank gene 2544387 2544776 . - . ID=gene-NDY24_11260;Name=NDY24_11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11260 CP098602.1 GeneMarkS-2+ CDS 2544387 2544776 . - 0 ID=cds-UUF00186.1;Parent=gene-NDY24_11260;Dbxref=NCBI_GP:UUF00186.1;Name=UUF00186.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_11260;product=hypothetical protein;protein_id=UUF00186.1;transl_table=11 CP098602.1 Genbank gene 2545499 2546182 . - . ID=gene-NDY24_11265;Name=NDY24_11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11265 CP098602.1 GeneMarkS-2+ CDS 2545499 2546182 . - 0 ID=cds-UUF00187.1;Parent=gene-NDY24_11265;Dbxref=NCBI_GP:UUF00187.1;Name=UUF00187.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_11265;product=hypothetical protein;protein_id=UUF00187.1;transl_table=11 CP098602.1 Genbank pseudogene 2547007 2547811 . - . ID=gene-NDY24_11270;Name=NDY24_11270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_11270;pseudo=true CP098602.1 Protein Homology CDS 2547007 2547811 . - 0 ID=cds-NDY24_11270;Parent=gene-NDY24_11270;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802850.1;locus_tag=NDY24_11270;product=IS5 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 2547978 2548326 . + . ID=gene-NDY24_11275;Name=NDY24_11275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_11275;pseudo=true CP098602.1 Protein Homology CDS 2547978 2548326 . + 0 ID=cds-NDY24_11275;Parent=gene-NDY24_11275;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011345873.1;locus_tag=NDY24_11275;product=type I toxin-antitoxin system SymE family toxin;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2548436 2548663 . + . ID=gene-NDY24_11280;Name=NDY24_11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11280 CP098602.1 Protein Homology CDS 2548436 2548663 . + 0 ID=cds-UUF00188.1;Parent=gene-NDY24_11280;Dbxref=NCBI_GP:UUF00188.1;Name=UUF00188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448532.1;locus_tag=NDY24_11280;product=hypothetical protein;protein_id=UUF00188.1;transl_table=11 CP098602.1 Genbank gene 2548846 2549049 . + . ID=gene-NDY24_11285;Name=NDY24_11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11285 CP098602.1 GeneMarkS-2+ CDS 2548846 2549049 . + 0 ID=cds-UUF00189.1;Parent=gene-NDY24_11285;Dbxref=NCBI_GP:UUF00189.1;Name=UUF00189.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_11285;product=hypothetical protein;protein_id=UUF00189.1;transl_table=11 CP098602.1 Genbank gene 2548995 2549150 . + . ID=gene-NDY24_11290;Name=NDY24_11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11290 CP098602.1 Protein Homology CDS 2548995 2549150 . + 0 ID=cds-UUF00373.1;Parent=gene-NDY24_11290;Dbxref=NCBI_GP:UUF00373.1;Name=UUF00373.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019408.2;locus_tag=NDY24_11290;product=DUF1629 domain-containing protein;protein_id=UUF00373.1;transl_table=11 CP098602.1 Genbank gene 2549134 2549496 . + . ID=gene-NDY24_11295;Name=NDY24_11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11295 CP098602.1 Protein Homology CDS 2549134 2549496 . + 0 ID=cds-UUF00374.1;Parent=gene-NDY24_11295;Dbxref=NCBI_GP:UUF00374.1;Name=UUF00374.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019408.2;locus_tag=NDY24_11295;product=DUF1629 domain-containing protein;protein_id=UUF00374.1;transl_table=11 CP098602.1 Genbank gene 2549690 2550349 . + . ID=gene-NDY24_11300;Name=NDY24_11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11300 CP098602.1 Protein Homology CDS 2549690 2550349 . + 0 ID=cds-UUF00375.1;Parent=gene-NDY24_11300;Dbxref=NCBI_GP:UUF00375.1;Name=UUF00375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904489.1;locus_tag=NDY24_11300;product=DUF1629 domain-containing protein;protein_id=UUF00375.1;transl_table=11 CP098602.1 Genbank gene 2550632 2550838 . - . ID=gene-NDY24_11305;Name=NDY24_11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11305 CP098602.1 GeneMarkS-2+ CDS 2550632 2550838 . - 0 ID=cds-UUF00190.1;Parent=gene-NDY24_11305;Dbxref=NCBI_GP:UUF00190.1;Name=UUF00190.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_11305;product=hypothetical protein;protein_id=UUF00190.1;transl_table=11 CP098602.1 Genbank gene 2551239 2553221 . + . ID=gene-NDY24_11310;Name=NDY24_11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11310 CP098602.1 Protein Homology CDS 2551239 2553221 . + 0 ID=cds-UUF00191.1;Parent=gene-NDY24_11310;Dbxref=NCBI_GP:UUF00191.1;Name=UUF00191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115093.1;locus_tag=NDY24_11310;product=hypothetical protein;protein_id=UUF00191.1;transl_table=11 CP098602.1 Genbank gene 2553266 2553526 . - . ID=gene-NDY24_11315;Name=NDY24_11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11315 CP098602.1 GeneMarkS-2+ CDS 2553266 2553526 . - 0 ID=cds-UUF00192.1;Parent=gene-NDY24_11315;Dbxref=NCBI_GP:UUF00192.1;Name=UUF00192.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_11315;product=hypothetical protein;protein_id=UUF00192.1;transl_table=11 CP098602.1 Genbank gene 2553530 2554177 . - . ID=gene-NDY24_11320;Name=NDY24_11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11320 CP098602.1 Protein Homology CDS 2553530 2554177 . - 0 ID=cds-UUF00193.1;Parent=gene-NDY24_11320;Dbxref=NCBI_GP:UUF00193.1;Name=UUF00193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448540.1;locus_tag=NDY24_11320;product=hypothetical protein;protein_id=UUF00193.1;transl_table=11 CP098602.1 Genbank gene 2554469 2554999 . - . ID=gene-NDY24_11325;Name=NDY24_11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11325 CP098602.1 GeneMarkS-2+ CDS 2554469 2554999 . - 0 ID=cds-UUF00194.1;Parent=gene-NDY24_11325;Dbxref=NCBI_GP:UUF00194.1;Name=UUF00194.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_11325;product=hypothetical protein;protein_id=UUF00194.1;transl_table=11 CP098602.1 Genbank gene 2555266 2556344 . - . ID=gene-NDY24_11330;Name=NDY24_11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11330 CP098602.1 Protein Homology CDS 2556113 2556344 . - 0 ID=cds-UUF00376.1;Parent=gene-NDY24_11330;Dbxref=NCBI_GP:UUF00376.1;Name=UUF00376.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611839.1;locus_tag=NDY24_11330;product=IS3 family transposase;protein_id=UUF00376.1;transl_table=11 CP098602.1 Protein Homology CDS 2555266 2556113 . - 2 ID=cds-UUF00376.1;Parent=gene-NDY24_11330;Dbxref=NCBI_GP:UUF00376.1;Name=UUF00376.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611839.1;locus_tag=NDY24_11330;product=IS3 family transposase;protein_id=UUF00376.1;transl_table=11 CP098602.1 Genbank gene 2557004 2557447 . + . ID=gene-NDY24_11335;Name=NDY24_11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11335 CP098602.1 Protein Homology CDS 2557004 2557447 . + 0 ID=cds-UUF00195.1;Parent=gene-NDY24_11335;Dbxref=NCBI_GP:UUF00195.1;Name=UUF00195.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019886.2;locus_tag=NDY24_11335;product=hypothetical protein;protein_id=UUF00195.1;transl_table=11 CP098602.1 Genbank gene 2557579 2557884 . - . ID=gene-NDY24_11340;Name=NDY24_11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11340 CP098602.1 GeneMarkS-2+ CDS 2557579 2557884 . - 0 ID=cds-UUF00196.1;Parent=gene-NDY24_11340;Dbxref=NCBI_GP:UUF00196.1;Name=UUF00196.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_11340;product=hypothetical protein;protein_id=UUF00196.1;transl_table=11 CP098602.1 Genbank gene 2559116 2559340 . + . ID=gene-NDY24_11345;Name=NDY24_11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11345 CP098602.1 GeneMarkS-2+ CDS 2559116 2559340 . + 0 ID=cds-UUF00197.1;Parent=gene-NDY24_11345;Dbxref=NCBI_GP:UUF00197.1;Name=UUF00197.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_11345;product=hypothetical protein;protein_id=UUF00197.1;transl_table=11 CP098602.1 Genbank gene 2559704 2559946 . - . ID=gene-NDY24_11350;Name=NDY24_11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11350 CP098602.1 GeneMarkS-2+ CDS 2559704 2559946 . - 0 ID=cds-UUF00198.1;Parent=gene-NDY24_11350;Dbxref=NCBI_GP:UUF00198.1;Name=UUF00198.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_11350;product=hypothetical protein;protein_id=UUF00198.1;transl_table=11 CP098602.1 Genbank gene 2560307 2560876 . + . ID=gene-NDY24_11355;Name=NDY24_11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11355 CP098602.1 GeneMarkS-2+ CDS 2560307 2560876 . + 0 ID=cds-UUF00199.1;Parent=gene-NDY24_11355;Dbxref=NCBI_GP:UUF00199.1;Name=UUF00199.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_11355;product=hypothetical protein;protein_id=UUF00199.1;transl_table=11 CP098602.1 Genbank gene 2561171 2561452 . - . ID=gene-NDY24_11360;Name=NDY24_11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11360 CP098602.1 GeneMarkS-2+ CDS 2561171 2561452 . - 0 ID=cds-UUF00200.1;Parent=gene-NDY24_11360;Dbxref=NCBI_GP:UUF00200.1;Name=UUF00200.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_11360;product=hypothetical protein;protein_id=UUF00200.1;transl_table=11 CP098602.1 Genbank gene 2561523 2561729 . - . ID=gene-NDY24_11365;Name=NDY24_11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11365 CP098602.1 GeneMarkS-2+ CDS 2561523 2561729 . - 0 ID=cds-UUF00201.1;Parent=gene-NDY24_11365;Dbxref=NCBI_GP:UUF00201.1;Name=UUF00201.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_11365;product=hypothetical protein;protein_id=UUF00201.1;transl_table=11 CP098602.1 Genbank gene 2561967 2563226 . - . ID=gene-NDY24_11370;Name=NDY24_11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11370 CP098602.1 Protein Homology CDS 2561967 2563226 . - 0 ID=cds-UUF00202.1;Parent=gene-NDY24_11370;Dbxref=NCBI_GP:UUF00202.1;Name=UUF00202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005996511.1;locus_tag=NDY24_11370;product=hypothetical protein;protein_id=UUF00202.1;transl_table=11 CP098602.1 Genbank gene 2563508 2564173 . - . ID=gene-NDY24_11375;Name=NDY24_11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11375 CP098602.1 Protein Homology CDS 2563508 2564173 . - 0 ID=cds-UUF00203.1;Parent=gene-NDY24_11375;Dbxref=NCBI_GP:UUF00203.1;Name=UUF00203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901251.1;locus_tag=NDY24_11375;product=hypothetical protein;protein_id=UUF00203.1;transl_table=11 CP098602.1 Genbank gene 2564454 2565074 . + . ID=gene-NDY24_11380;Name=NDY24_11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11380 CP098602.1 Protein Homology CDS 2564454 2565074 . + 0 ID=cds-UUF00204.1;Parent=gene-NDY24_11380;Dbxref=NCBI_GP:UUF00204.1;Name=UUF00204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901250.1;locus_tag=NDY24_11380;product=DUF4142 domain-containing protein;protein_id=UUF00204.1;transl_table=11 CP098602.1 Genbank gene 2565153 2565452 . - . ID=gene-NDY24_11385;Name=NDY24_11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11385 CP098602.1 Protein Homology CDS 2565153 2565452 . - 0 ID=cds-UUF00205.1;Parent=gene-NDY24_11385;Dbxref=NCBI_GP:UUF00205.1;Name=UUF00205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009578834.1;locus_tag=NDY24_11385;product=hypothetical protein;protein_id=UUF00205.1;transl_table=11 CP098602.1 Genbank gene 2566286 2569402 . + . ID=gene-NDY24_11390;Name=NDY24_11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11390 CP098602.1 Protein Homology CDS 2566286 2569402 . + 0 ID=cds-UUF00206.1;Parent=gene-NDY24_11390;Dbxref=NCBI_GP:UUF00206.1;Name=UUF00206.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574465.1;locus_tag=NDY24_11390;product=DUF3416 domain-containing protein;protein_id=UUF00206.1;transl_table=11 CP098602.1 Genbank gene 2569399 2572749 . + . ID=gene-NDY24_11395;Name=treS;gbkey=Gene;gene=treS;gene_biotype=protein_coding;locus_tag=NDY24_11395 CP098602.1 Protein Homology CDS 2569399 2572749 . + 0 ID=cds-UUF00207.1;Parent=gene-NDY24_11395;Dbxref=NCBI_GP:UUF00207.1;Name=UUF00207.1;Ontology_term=GO:0005991,GO:0047471;gbkey=CDS;gene=treS;go_function=maltose alpha-D-glucosyltransferase activity|0047471||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451143.1;locus_tag=NDY24_11395;product=maltose alpha-D-glucosyltransferase;protein_id=UUF00207.1;transl_table=11 CP098602.1 Genbank gene 2572761 2574944 . + . ID=gene-NDY24_11400;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=NDY24_11400 CP098602.1 Protein Homology CDS 2572761 2574944 . + 0 ID=cds-UUF00377.1;Parent=gene-NDY24_11400;Dbxref=NCBI_GP:UUF00377.1;Name=UUF00377.1;Ontology_term=GO:0005975,GO:0005978,GO:0003844,GO:0004553,GO:0043169;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,cation binding|0043169||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302960.1;locus_tag=NDY24_11400;product=1%2C4-alpha-glucan branching protein GlgB;protein_id=UUF00377.1;transl_table=11 CP098602.1 Genbank gene 2575337 2575636 . + . ID=gene-NDY24_11405;Name=NDY24_11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11405 CP098602.1 Protein Homology CDS 2575337 2575636 . + 0 ID=cds-UUF00208.1;Parent=gene-NDY24_11405;Dbxref=NCBI_GP:UUF00208.1;Name=UUF00208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451145.1;locus_tag=NDY24_11405;product=hypothetical protein;protein_id=UUF00208.1;transl_table=11 CP098602.1 Genbank gene 2575626 2575898 . + . ID=gene-NDY24_11410;Name=NDY24_11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11410 CP098602.1 Protein Homology CDS 2575626 2575898 . + 0 ID=cds-UUF00209.1;Parent=gene-NDY24_11410;Dbxref=NCBI_GP:UUF00209.1;Name=UUF00209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035396.1;locus_tag=NDY24_11410;product=hypothetical protein;protein_id=UUF00209.1;transl_table=11 CP098602.1 Genbank pseudogene 2575895 2577446 . + . ID=gene-NDY24_11415;Name=NDY24_11415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_11415;pseudo=true CP098602.1 Protein Homology CDS 2575895 2577446 . + 0 ID=cds-NDY24_11415;Parent=gene-NDY24_11415;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451147.1;locus_tag=NDY24_11415;product=PepSY domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2577617 2578081 . + . ID=gene-NDY24_11420;Name=NDY24_11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11420 CP098602.1 Protein Homology CDS 2577617 2578081 . + 0 ID=cds-UUF00210.1;Parent=gene-NDY24_11420;Dbxref=NCBI_GP:UUF00210.1;Name=UUF00210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451148.1;locus_tag=NDY24_11420;product=metallophosphatase family protein;protein_id=UUF00210.1;transl_table=11 CP098602.1 Genbank gene 2578369 2579517 . + . ID=gene-NDY24_11425;Name=NDY24_11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11425 CP098602.1 Protein Homology CDS 2578369 2579517 . + 0 ID=cds-UUF00211.1;Parent=gene-NDY24_11425;Dbxref=NCBI_GP:UUF00211.1;Name=UUF00211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451149.1;locus_tag=NDY24_11425;product=aldo/keto reductase;protein_id=UUF00211.1;transl_table=11 CP098602.1 Genbank gene 2580042 2580989 . - . ID=gene-NDY24_11430;Name=NDY24_11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11430 CP098602.1 Protein Homology CDS 2580042 2580989 . - 0 ID=cds-UUF00212.1;Parent=gene-NDY24_11430;Dbxref=NCBI_GP:UUF00212.1;Name=UUF00212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005989697.1;locus_tag=NDY24_11430;product=rhamnogalacturonan acetylesterase;protein_id=UUF00212.1;transl_table=11 CP098602.1 Genbank pseudogene 2581191 2582815 . - . ID=gene-NDY24_11435;Name=NDY24_11435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_11435;pseudo=true CP098602.1 Protein Homology CDS 2581191 2582815 . - 0 ID=cds-NDY24_11435;Parent=gene-NDY24_11435;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912119.1;locus_tag=NDY24_11435;product=carboxylesterase/lipase family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2582812 2583921 . - . ID=gene-NDY24_11440;Name=NDY24_11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11440 CP098602.1 Protein Homology CDS 2582812 2583921 . - 0 ID=cds-UUF00213.1;Parent=gene-NDY24_11440;Dbxref=NCBI_GP:UUF00213.1;Name=UUF00213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968140.1;locus_tag=NDY24_11440;product=alpha/beta hydrolase;protein_id=UUF00213.1;transl_table=11 CP098602.1 Genbank gene 2584061 2584882 . + . ID=gene-NDY24_11445;Name=NDY24_11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11445 CP098602.1 Protein Homology CDS 2584061 2584882 . + 0 ID=cds-UUF00214.1;Parent=gene-NDY24_11445;Dbxref=NCBI_GP:UUF00214.1;Name=UUF00214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005932540.1;locus_tag=NDY24_11445;product=2-keto-4-pentenoate hydratase;protein_id=UUF00214.1;transl_table=11 CP098602.1 Genbank gene 2584919 2585917 . + . ID=gene-NDY24_11450;Name=NDY24_11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11450 CP098602.1 Protein Homology CDS 2584919 2585917 . + 0 ID=cds-UUF00215.1;Parent=gene-NDY24_11450;Dbxref=NCBI_GP:UUF00215.1;Name=UUF00215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850027.1;locus_tag=NDY24_11450;product=TRAP transporter substrate-binding protein;protein_id=UUF00215.1;transl_table=11 CP098602.1 Genbank gene 2585928 2586449 . + . ID=gene-NDY24_11455;Name=NDY24_11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11455 CP098602.1 Protein Homology CDS 2585928 2586449 . + 0 ID=cds-UUF00216.1;Parent=gene-NDY24_11455;Dbxref=NCBI_GP:UUF00216.1;Name=UUF00216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912128.1;locus_tag=NDY24_11455;product=TRAP transporter small permease;protein_id=UUF00216.1;transl_table=11 CP098602.1 Genbank gene 2586449 2587732 . + . ID=gene-NDY24_11460;Name=NDY24_11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11460 CP098602.1 Protein Homology CDS 2586449 2587732 . + 0 ID=cds-UUF00217.1;Parent=gene-NDY24_11460;Dbxref=NCBI_GP:UUF00217.1;Name=UUF00217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489871.1;locus_tag=NDY24_11460;product=TRAP transporter large permease;protein_id=UUF00217.1;transl_table=11 CP098602.1 Genbank gene 2587970 2589553 . + . ID=gene-NDY24_11465;Name=NDY24_11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11465 CP098602.1 Protein Homology CDS 2587970 2589553 . + 0 ID=cds-UUF00218.1;Parent=gene-NDY24_11465;Dbxref=NCBI_GP:UUF00218.1;Name=UUF00218.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011345889.1;locus_tag=NDY24_11465;product=family 43 glycosylhydrolase;protein_id=UUF00218.1;transl_table=11 CP098602.1 Genbank gene 2589694 2590752 . + . ID=gene-NDY24_11470;Name=NDY24_11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11470 CP098602.1 Protein Homology CDS 2589694 2590752 . + 0 ID=cds-UUF00219.1;Parent=gene-NDY24_11470;Dbxref=NCBI_GP:UUF00219.1;Name=UUF00219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158097.1;locus_tag=NDY24_11470;product=LacI family DNA-binding transcriptional regulator;protein_id=UUF00219.1;transl_table=11 CP098602.1 Genbank gene 2591291 2592145 . + . ID=gene-NDY24_11475;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=NDY24_11475 CP098602.1 Protein Homology CDS 2591291 2592145 . + 0 ID=cds-UUF00220.1;Parent=gene-NDY24_11475;Dbxref=NCBI_GP:UUF00220.1;Name=UUF00220.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005991266.1;locus_tag=NDY24_11475;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=UUF00220.1;transl_table=11 CP098602.1 Genbank gene 2592305 2593060 . + . ID=gene-NDY24_11480;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=NDY24_11480 CP098602.1 Protein Homology CDS 2592305 2593060 . + 0 ID=cds-UUF00221.1;Parent=gene-NDY24_11480;Dbxref=NCBI_GP:UUF00221.1;Name=UUF00221.1;Ontology_term=GO:0000272,GO:0008678,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=2-deoxy-D-gluconate 3-dehydrogenase activity|0008678||IEA,oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035409.1;locus_tag=NDY24_11480;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=UUF00221.1;transl_table=11 CP098602.1 Genbank pseudogene 2593294 2593947 . + . ID=gene-NDY24_11485;Name=NDY24_11485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_11485;pseudo=true CP098602.1 Protein Homology CDS 2593294 2593947 . + 0 ID=cds-NDY24_11485;Parent=gene-NDY24_11485;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849064.1;locus_tag=NDY24_11485;product=RpiB/LacA/LacB family sugar-phosphate isomerase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 2594198 2595319 . + . ID=gene-NDY24_11490;Name=NDY24_11490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_11490;pseudo=true CP098602.1 Protein Homology CDS 2594198 2595319 . + 0 ID=cds-NDY24_11490;Parent=gene-NDY24_11490;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452145.1;locus_tag=NDY24_11490;product=GDSL-type esterase/lipase family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2595389 2596672 . - . ID=gene-NDY24_11495;Name=NDY24_11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11495 CP098602.1 Protein Homology CDS 2595389 2596672 . - 0 ID=cds-UUF00222.1;Parent=gene-NDY24_11495;Dbxref=NCBI_GP:UUF00222.1;Name=UUF00222.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019421.2;locus_tag=NDY24_11495;product=type II toxin-antitoxin system HipA family toxin;protein_id=UUF00222.1;transl_table=11 CP098602.1 Genbank gene 2596669 2596965 . - . ID=gene-NDY24_11500;Name=NDY24_11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11500 CP098602.1 Protein Homology CDS 2596669 2596965 . - 0 ID=cds-UUF00223.1;Parent=gene-NDY24_11500;Dbxref=NCBI_GP:UUF00223.1;Name=UUF00223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452143.1;locus_tag=NDY24_11500;product=helix-turn-helix domain-containing protein;protein_id=UUF00223.1;transl_table=11 CP098602.1 Genbank gene 2597272 2598588 . + . ID=gene-NDY24_11505;Name=NDY24_11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11505 CP098602.1 Protein Homology CDS 2597272 2598588 . + 0 ID=cds-UUF00224.1;Parent=gene-NDY24_11505;Dbxref=NCBI_GP:UUF00224.1;Name=UUF00224.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017142.2;locus_tag=NDY24_11505;product=peptidase M61;protein_id=UUF00224.1;transl_table=11 CP098602.1 Genbank gene 2598595 2599008 . + . ID=gene-NDY24_11510;Name=NDY24_11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11510 CP098602.1 GeneMarkS-2+ CDS 2598595 2599008 . + 0 ID=cds-UUF00225.1;Parent=gene-NDY24_11510;Dbxref=NCBI_GP:UUF00225.1;Name=UUF00225.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_11510;product=hypothetical protein;protein_id=UUF00225.1;transl_table=11 CP098602.1 Genbank gene 2599060 2599704 . - . ID=gene-NDY24_11515;Name=NDY24_11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11515 CP098602.1 Protein Homology CDS 2599060 2599704 . - 0 ID=cds-UUF00226.1;Parent=gene-NDY24_11515;Dbxref=NCBI_GP:UUF00226.1;Name=UUF00226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490472.1;locus_tag=NDY24_11515;product=DUF4375 domain-containing protein;protein_id=UUF00226.1;transl_table=11 CP098602.1 Genbank gene 2599796 2600686 . - . ID=gene-NDY24_11520;Name=phhA;gbkey=Gene;gene=phhA;gene_biotype=protein_coding;locus_tag=NDY24_11520 CP098602.1 Protein Homology CDS 2599796 2600686 . - 0 ID=cds-UUF00227.1;Parent=gene-NDY24_11520;Dbxref=NCBI_GP:UUF00227.1;Name=UUF00227.1;Ontology_term=GO:0006559,GO:0004505;gbkey=CDS;gene=phhA;go_function=phenylalanine 4-monooxygenase activity|0004505||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158567.1;locus_tag=NDY24_11520;product=phenylalanine 4-monooxygenase;protein_id=UUF00227.1;transl_table=11 CP098602.1 Genbank gene 2600814 2601296 . + . ID=gene-NDY24_11525;Name=NDY24_11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11525 CP098602.1 Protein Homology CDS 2600814 2601296 . + 0 ID=cds-UUF00228.1;Parent=gene-NDY24_11525;Dbxref=NCBI_GP:UUF00228.1;Name=UUF00228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912138.1;locus_tag=NDY24_11525;product=Lrp/AsnC family transcriptional regulator;protein_id=UUF00228.1;transl_table=11 CP098602.1 Genbank gene 2601518 2603731 . + . ID=gene-NDY24_11530;Name=NDY24_11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11530 CP098602.1 Protein Homology CDS 2601518 2603731 . + 0 ID=cds-UUF00229.1;Parent=gene-NDY24_11530;Dbxref=NCBI_GP:UUF00229.1;Name=UUF00229.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157370.1;locus_tag=NDY24_11530;product=TonB-dependent siderophore receptor;protein_id=UUF00229.1;transl_table=11 CP098602.1 Genbank pseudogene 2604183 2605221 . - . ID=gene-NDY24_11535;Name=NDY24_11535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_11535;pseudo=true CP098602.1 Protein Homology CDS 2604183 2605221 . - 0 ID=cds-NDY24_11535;Parent=gene-NDY24_11535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035416.1;locus_tag=NDY24_11535;product=patatin-like phospholipase family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2605436 2606269 . - . ID=gene-NDY24_11540;Name=NDY24_11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11540 CP098602.1 Protein Homology CDS 2605436 2606269 . - 0 ID=cds-UUF00230.1;Parent=gene-NDY24_11540;Dbxref=NCBI_GP:UUF00230.1;Name=UUF00230.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453187.1;locus_tag=NDY24_11540;product=ATP-binding cassette domain-containing protein;protein_id=UUF00230.1;transl_table=11 CP098602.1 Genbank gene 2606421 2607626 . + . ID=gene-NDY24_11545;Name=NDY24_11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11545 CP098602.1 Protein Homology CDS 2606421 2607626 . + 0 ID=cds-UUF00231.1;Parent=gene-NDY24_11545;Dbxref=NCBI_GP:UUF00231.1;Name=UUF00231.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379811.1;locus_tag=NDY24_11545;product=fatty acid desaturase;protein_id=UUF00231.1;transl_table=11 CP098602.1 Genbank gene 2607688 2608011 . + . ID=gene-NDY24_11550;Name=NDY24_11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11550 CP098602.1 Protein Homology CDS 2607688 2608011 . + 0 ID=cds-UUF00378.1;Parent=gene-NDY24_11550;Dbxref=NCBI_GP:UUF00378.1;Name=UUF00378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453189.1;locus_tag=NDY24_11550;product=calcium-dependent protein kinase 21;protein_id=UUF00378.1;transl_table=11 CP098602.1 Genbank gene 2608072 2608809 . + . ID=gene-NDY24_11555;Name=NDY24_11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11555 CP098602.1 Protein Homology CDS 2608072 2608809 . + 0 ID=cds-UUE96645.1;Parent=gene-NDY24_11555;Dbxref=NCBI_GP:UUE96645.1;Name=UUE96645.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005992662.1;locus_tag=NDY24_11555;product=ATP-binding cassette domain-containing protein;protein_id=UUE96645.1;transl_table=11 CP098602.1 Genbank gene 2608806 2610278 . + . ID=gene-NDY24_11560;Name=NDY24_11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11560 CP098602.1 Protein Homology CDS 2608806 2610278 . + 0 ID=cds-UUE96646.1;Parent=gene-NDY24_11560;Dbxref=NCBI_GP:UUE96646.1;Name=UUE96646.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005992664.1;locus_tag=NDY24_11560;product=ABC transporter permease subunit;protein_id=UUE96646.1;transl_table=11 CP098602.1 Genbank gene 2610399 2611580 . - . ID=gene-NDY24_11565;Name=NDY24_11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11565 CP098602.1 Protein Homology CDS 2610399 2611580 . - 0 ID=cds-UUE96647.1;Parent=gene-NDY24_11565;Dbxref=NCBI_GP:UUE96647.1;Name=UUE96647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014088984.1;locus_tag=NDY24_11565;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=UUE96647.1;transl_table=11 CP098602.1 Genbank gene 2611646 2612935 . + . ID=gene-NDY24_11570;Name=egtB;gbkey=Gene;gene=egtB;gene_biotype=protein_coding;locus_tag=NDY24_11570 CP098602.1 Protein Homology CDS 2611646 2612935 . + 0 ID=cds-UUE96648.1;Parent=gene-NDY24_11570;Dbxref=NCBI_GP:UUE96648.1;Name=UUE96648.1;Ontology_term=GO:0052699;gbkey=CDS;gene=egtB;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015471562.1;locus_tag=NDY24_11570;product=ergothioneine biosynthesis protein EgtB;protein_id=UUE96648.1;transl_table=11 CP098602.1 Genbank gene 2612932 2613918 . + . ID=gene-NDY24_11575;Name=egtD;gbkey=Gene;gene=egtD;gene_biotype=protein_coding;locus_tag=NDY24_11575 CP098602.1 Protein Homology CDS 2612932 2613918 . + 0 ID=cds-UUE96649.1;Parent=gene-NDY24_11575;Dbxref=NCBI_GP:UUE96649.1;Name=UUE96649.1;Ontology_term=GO:0052699,GO:0030745;gbkey=CDS;gene=egtD;go_function=dimethylhistidine N-methyltransferase activity|0030745||IEA;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157360.1;locus_tag=NDY24_11575;product=L-histidine N(alpha)-methyltransferase;protein_id=UUE96649.1;transl_table=11 CP098602.1 Genbank gene 2613976 2615235 . - . ID=gene-NDY24_11580;Name=NDY24_11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11580 CP098602.1 Protein Homology CDS 2613976 2615235 . - 0 ID=cds-UUF00379.1;Parent=gene-NDY24_11580;Dbxref=NCBI_GP:UUF00379.1;Name=UUF00379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453195.1;locus_tag=NDY24_11580;product=type II toxin-antitoxin system HipA family toxin;protein_id=UUF00379.1;transl_table=11 CP098602.1 Genbank gene 2615250 2615867 . - . ID=gene-NDY24_11585;Name=NDY24_11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11585 CP098602.1 Protein Homology CDS 2615250 2615867 . - 0 ID=cds-UUE96650.1;Parent=gene-NDY24_11585;Dbxref=NCBI_GP:UUE96650.1;Name=UUE96650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921168.1;locus_tag=NDY24_11585;product=type II toxin-antitoxin system Y4mF family antitoxin;protein_id=UUE96650.1;transl_table=11 CP098602.1 Genbank gene 2615993 2619700 . - . ID=gene-NDY24_11590;Name=NDY24_11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11590 CP098602.1 Protein Homology CDS 2615993 2619700 . - 0 ID=cds-UUE96651.1;Parent=gene-NDY24_11590;Dbxref=NCBI_GP:UUE96651.1;Name=UUE96651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488440.1;locus_tag=NDY24_11590;product=indolepyruvate ferredoxin oxidoreductase family protein;protein_id=UUE96651.1;transl_table=11 CP098602.1 Genbank gene 2619864 2620502 . + . ID=gene-NDY24_11595;Name=NDY24_11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11595 CP098602.1 Protein Homology CDS 2619864 2620502 . + 0 ID=cds-UUE96652.1;Parent=gene-NDY24_11595;Dbxref=NCBI_GP:UUE96652.1;Name=UUE96652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571529.1;locus_tag=NDY24_11595;product=tetratricopeptide repeat protein;protein_id=UUE96652.1;transl_table=11 CP098602.1 Genbank pseudogene 2621161 2622078 . + . ID=gene-NDY24_11600;Name=NDY24_11600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_11600;pseudo=true CP098602.1 Protein Homology CDS 2621161 2622078 . + 0 ID=cds-NDY24_11600;Parent=gene-NDY24_11600;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014088991.1;locus_tag=NDY24_11600;product=AEC family transporter;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2622410 2623042 . + . ID=gene-NDY24_11605;Name=NDY24_11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11605 CP098602.1 Protein Homology CDS 2622410 2623042 . + 0 ID=cds-UUE96653.1;Parent=gene-NDY24_11605;Dbxref=NCBI_GP:UUE96653.1;Name=UUE96653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159611.1;locus_tag=NDY24_11605;product=ParA family protein;protein_id=UUE96653.1;transl_table=11 CP098602.1 Genbank gene 2623057 2623533 . + . ID=gene-NDY24_11610;Name=NDY24_11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11610 CP098602.1 Protein Homology CDS 2623057 2623533 . + 0 ID=cds-UUE96654.1;Parent=gene-NDY24_11610;Dbxref=NCBI_GP:UUE96654.1;Name=UUE96654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035432.1;locus_tag=NDY24_11610;product=histidine phosphatase family protein;protein_id=UUE96654.1;transl_table=11 CP098602.1 Genbank gene 2623537 2624109 . + . ID=gene-NDY24_11615;Name=NDY24_11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11615 CP098602.1 Protein Homology CDS 2623537 2624109 . + 0 ID=cds-UUE96655.1;Parent=gene-NDY24_11615;Dbxref=NCBI_GP:UUE96655.1;Name=UUE96655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488454.1;locus_tag=NDY24_11615;product=YceI family protein;protein_id=UUE96655.1;transl_table=11 CP098602.1 Genbank gene 2624106 2626139 . + . ID=gene-NDY24_11620;Name=NDY24_11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11620 CP098602.1 Protein Homology CDS 2624106 2626139 . + 0 ID=cds-UUE96656.1;Parent=gene-NDY24_11620;Dbxref=NCBI_GP:UUE96656.1;Name=UUE96656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921165.1;locus_tag=NDY24_11620;product=phospholipase D family protein;protein_id=UUE96656.1;transl_table=11 CP098602.1 Genbank gene 2626376 2626804 . + . ID=gene-NDY24_11625;Name=NDY24_11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11625 CP098602.1 Protein Homology CDS 2626376 2626804 . + 0 ID=cds-UUE96657.1;Parent=gene-NDY24_11625;Dbxref=NCBI_GP:UUE96657.1;Name=UUE96657.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157352.1;locus_tag=NDY24_11625;product=hotdog fold thioesterase;protein_id=UUE96657.1;transl_table=11 CP098602.1 Genbank pseudogene 2626826 2627722 . + . ID=gene-NDY24_11630;Name=NDY24_11630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_11630;pseudo=true CP098602.1 Protein Homology CDS 2626826 2627722 . + 0 ID=cds-NDY24_11630;Parent=gene-NDY24_11630;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851587.1;locus_tag=NDY24_11630;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2627788 2628774 . + . ID=gene-NDY24_11635;Name=NDY24_11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11635 CP098602.1 Protein Homology CDS 2627788 2628774 . + 0 ID=cds-UUE96658.1;Parent=gene-NDY24_11635;Dbxref=NCBI_GP:UUE96658.1;Name=UUE96658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449215.1;locus_tag=NDY24_11635;product=alpha/beta fold hydrolase;protein_id=UUE96658.1;transl_table=11 CP098602.1 Genbank gene 2628838 2629818 . + . ID=gene-NDY24_11640;Name=NDY24_11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11640 CP098602.1 Protein Homology CDS 2628838 2629818 . + 0 ID=cds-UUE96659.1;Parent=gene-NDY24_11640;Dbxref=NCBI_GP:UUE96659.1;Name=UUE96659.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=NDY24_11640;product=IS5 family transposase;protein_id=UUE96659.1;transl_table=11 CP098602.1 Genbank gene 2630552 2632627 . + . ID=gene-NDY24_11645;Name=NDY24_11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11645 CP098602.1 Protein Homology CDS 2630552 2632627 . + 0 ID=cds-UUE96660.1;Parent=gene-NDY24_11645;Dbxref=NCBI_GP:UUE96660.1;Name=UUE96660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237114.1;locus_tag=NDY24_11645;product=tetratricopeptide repeat protein;protein_id=UUE96660.1;transl_table=11 CP098602.1 Genbank pseudogene 2632895 2633506 . + . ID=gene-NDY24_11650;Name=NDY24_11650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_11650;pseudo=true CP098602.1 Protein Homology CDS 2632895 2633506 . + 0 ID=cds-NDY24_11650;Parent=gene-NDY24_11650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157349.1;locus_tag=NDY24_11650;product=YbhB/YbcL family Raf kinase inhibitor-like protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 2633774 2634584 . - . ID=gene-NDY24_11655;Name=NDY24_11655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_11655;pseudo=true CP098602.1 Protein Homology CDS 2633774 2634584 . - 0 ID=cds-NDY24_11655;Parent=gene-NDY24_11655;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449212.1;locus_tag=NDY24_11655;product=META and DUF4377 domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2634722 2635516 . - . ID=gene-NDY24_11660;Name=NDY24_11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11660 CP098602.1 Protein Homology CDS 2634722 2635516 . - 0 ID=cds-UUE96661.1;Parent=gene-NDY24_11660;Dbxref=NCBI_GP:UUE96661.1;Name=UUE96661.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903412.1;locus_tag=NDY24_11660;product=undecaprenyl-diphosphate phosphatase;protein_id=UUE96661.1;transl_table=11 CP098602.1 Genbank gene 2635737 2637146 . + . ID=gene-NDY24_11665;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=NDY24_11665 CP098602.1 Protein Homology CDS 2635737 2637146 . + 0 ID=cds-UUE96662.1;Parent=gene-NDY24_11665;Dbxref=NCBI_GP:UUE96662.1;Name=UUE96662.1;Ontology_term=GO:0006542,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamate-ammonia ligase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157345.1;locus_tag=NDY24_11665;product=type I glutamate--ammonia ligase;protein_id=UUE96662.1;transl_table=11 CP098602.1 Genbank gene 2637435 2637773 . + . ID=gene-NDY24_11670;Name=NDY24_11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11670 CP098602.1 Protein Homology CDS 2637435 2637773 . + 0 ID=cds-UUE96663.1;Parent=gene-NDY24_11670;Dbxref=NCBI_GP:UUE96663.1;Name=UUE96663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_253975.1;locus_tag=NDY24_11670;product=P-II family nitrogen regulator;protein_id=UUE96663.1;transl_table=11 CP098602.1 Genbank gene 2637763 2639238 . + . ID=gene-NDY24_11675;Name=NDY24_11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11675 CP098602.1 Protein Homology CDS 2637763 2639238 . + 0 ID=cds-UUE96664.1;Parent=gene-NDY24_11675;Dbxref=NCBI_GP:UUE96664.1;Name=UUE96664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437001.1;locus_tag=NDY24_11675;product=ammonium transporter;protein_id=UUE96664.1;transl_table=11 CP098602.1 Genbank gene 2639503 2640558 . + . ID=gene-NDY24_11680;Name=NDY24_11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11680 CP098602.1 Protein Homology CDS 2639503 2640558 . + 0 ID=cds-UUE96665.1;Parent=gene-NDY24_11680;Dbxref=NCBI_GP:UUE96665.1;Name=UUE96665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850649.1;locus_tag=NDY24_11680;product=ATP-binding protein;protein_id=UUE96665.1;transl_table=11 CP098602.1 Genbank gene 2640551 2641981 . + . ID=gene-NDY24_11685;Name=ntrC;gbkey=Gene;gene=ntrC;gene_biotype=protein_coding;locus_tag=NDY24_11685 CP098602.1 Protein Homology CDS 2640551 2641981 . + 0 ID=cds-UUE96666.1;Parent=gene-NDY24_11685;Dbxref=NCBI_GP:UUE96666.1;Name=UUE96666.1;Ontology_term=GO:0000160,GO:0006808,GO:0000156,GO:0003677;gbkey=CDS;gene=ntrC;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921161.1;locus_tag=NDY24_11685;product=nitrogen regulation protein NR(I);protein_id=UUE96666.1;transl_table=11 CP098602.1 Genbank gene 2642445 2643047 . + . ID=gene-NDY24_11690;Name=NDY24_11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11690 CP098602.1 Protein Homology CDS 2642445 2643047 . + 0 ID=cds-UUE96667.1;Parent=gene-NDY24_11690;Dbxref=NCBI_GP:UUE96667.1;Name=UUE96667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165149.1;locus_tag=NDY24_11690;product=superoxide dismutase family protein;protein_id=UUE96667.1;transl_table=11 CP098602.1 Genbank gene 2643097 2643744 . + . ID=gene-NDY24_11695;Name=NDY24_11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11695 CP098602.1 Protein Homology CDS 2643097 2643744 . + 0 ID=cds-UUE96668.1;Parent=gene-NDY24_11695;Dbxref=NCBI_GP:UUE96668.1;Name=UUE96668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014088999.1;locus_tag=NDY24_11695;product=superoxide dismutase family protein;protein_id=UUE96668.1;transl_table=11 CP098602.1 Genbank gene 2643963 2644847 . - . ID=gene-NDY24_11700;Name=NDY24_11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11700 CP098602.1 Protein Homology CDS 2643963 2644847 . - 0 ID=cds-UUE96669.1;Parent=gene-NDY24_11700;Dbxref=NCBI_GP:UUE96669.1;Name=UUE96669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005992724.1;locus_tag=NDY24_11700;product=hypothetical protein;protein_id=UUE96669.1;transl_table=11 CP098602.1 Genbank gene 2644936 2646231 . + . ID=gene-NDY24_11705;Name=NDY24_11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11705 CP098602.1 Protein Homology CDS 2644936 2646231 . + 0 ID=cds-UUE96670.1;Parent=gene-NDY24_11705;Dbxref=NCBI_GP:UUE96670.1;Name=UUE96670.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260437.1;locus_tag=NDY24_11705;product=acetyl-CoA C-acetyltransferase;protein_id=UUE96670.1;transl_table=11 CP098602.1 Genbank gene 2646345 2646887 . + . ID=gene-NDY24_11710;Name=NDY24_11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11710 CP098602.1 Protein Homology CDS 2646345 2646887 . + 0 ID=cds-UUE96671.1;Parent=gene-NDY24_11710;Dbxref=NCBI_GP:UUE96671.1;Name=UUE96671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449202.1;locus_tag=NDY24_11710;product=hypothetical protein;protein_id=UUE96671.1;transl_table=11 CP098602.1 Genbank gene 2647092 2648357 . - . ID=gene-NDY24_11715;Name=NDY24_11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11715 CP098602.1 Protein Homology CDS 2647092 2648357 . - 0 ID=cds-UUE96672.1;Parent=gene-NDY24_11715;Dbxref=NCBI_GP:UUE96672.1;Name=UUE96672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112149.1;locus_tag=NDY24_11715;product=heme biosynthesis protein HemY;protein_id=UUE96672.1;transl_table=11 CP098602.1 Genbank gene 2648354 2649331 . - . ID=gene-NDY24_11720;Name=NDY24_11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11720 CP098602.1 Protein Homology CDS 2648354 2649331 . - 0 ID=cds-UUE96673.1;Parent=gene-NDY24_11720;Dbxref=NCBI_GP:UUE96673.1;Name=UUE96673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488502.1;locus_tag=NDY24_11720;product=uroporphyrinogen-III C-methyltransferase;protein_id=UUE96673.1;transl_table=11 CP098602.1 Genbank gene 2649435 2650211 . - . ID=gene-NDY24_11725;Name=NDY24_11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11725 CP098602.1 Protein Homology CDS 2649435 2650211 . - 0 ID=cds-UUF00380.1;Parent=gene-NDY24_11725;Dbxref=NCBI_GP:UUF00380.1;Name=UUF00380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449199.1;locus_tag=NDY24_11725;product=uroporphyrinogen-III synthase;protein_id=UUF00380.1;transl_table=11 CP098602.1 Genbank gene 2650432 2651241 . + . ID=gene-NDY24_11730;Name=NDY24_11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11730 CP098602.1 Protein Homology CDS 2650432 2651241 . + 0 ID=cds-UUE96674.1;Parent=gene-NDY24_11730;Dbxref=NCBI_GP:UUE96674.1;Name=UUE96674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089004.1;locus_tag=NDY24_11730;product=glycosyltransferase family 25 protein;protein_id=UUE96674.1;transl_table=11 CP098602.1 Genbank gene 2651381 2651851 . + . ID=gene-NDY24_11735;Name=NDY24_11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11735 CP098602.1 Protein Homology CDS 2651381 2651851 . + 0 ID=cds-UUE96675.1;Parent=gene-NDY24_11735;Dbxref=NCBI_GP:UUE96675.1;Name=UUE96675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156408.1;locus_tag=NDY24_11735;product=YiiD C-terminal domain-containing protein;protein_id=UUE96675.1;transl_table=11 CP098602.1 Genbank gene 2651879 2652301 . + . ID=gene-NDY24_11740;Name=NDY24_11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11740 CP098602.1 Protein Homology CDS 2651879 2652301 . + 0 ID=cds-UUE96676.1;Parent=gene-NDY24_11740;Dbxref=NCBI_GP:UUE96676.1;Name=UUE96676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912206.1;locus_tag=NDY24_11740;product=hypothetical protein;protein_id=UUE96676.1;transl_table=11 CP098602.1 Genbank gene 2652378 2652815 . + . ID=gene-NDY24_11745;Name=NDY24_11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11745 CP098602.1 Protein Homology CDS 2652378 2652815 . + 0 ID=cds-UUF00381.1;Parent=gene-NDY24_11745;Dbxref=NCBI_GP:UUF00381.1;Name=UUF00381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809858.1;locus_tag=NDY24_11745;product=rhodanese-like domain-containing protein;protein_id=UUF00381.1;transl_table=11 CP098602.1 Genbank gene 2652927 2653442 . + . ID=gene-NDY24_11750;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=NDY24_11750 CP098602.1 Protein Homology CDS 2652927 2653442 . + 0 ID=cds-UUE96677.1;Parent=gene-NDY24_11750;Dbxref=NCBI_GP:UUE96677.1;Name=UUE96677.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501523.1;locus_tag=NDY24_11750;product=protein-export chaperone SecB;protein_id=UUE96677.1;transl_table=11 CP098602.1 Genbank gene 2653458 2654483 . + . ID=gene-NDY24_11755;Name=NDY24_11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11755 CP098602.1 Protein Homology CDS 2653458 2654483 . + 0 ID=cds-UUE96678.1;Parent=gene-NDY24_11755;Dbxref=NCBI_GP:UUE96678.1;Name=UUE96678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035460.1;locus_tag=NDY24_11755;product=NAD(P)-dependent glycerol-3-phosphate dehydrogenase;protein_id=UUE96678.1;transl_table=11 CP098602.1 Genbank gene 2654785 2655381 . - . ID=gene-NDY24_11760;Name=NDY24_11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11760 CP098602.1 Protein Homology CDS 2654785 2655381 . - 0 ID=cds-UUE96679.1;Parent=gene-NDY24_11760;Dbxref=NCBI_GP:UUE96679.1;Name=UUE96679.1;Ontology_term=GO:0009372;gbkey=CDS;go_process=quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451122.1;locus_tag=NDY24_11760;product=Ax21 family protein;protein_id=UUE96679.1;transl_table=11 CP098602.1 Genbank gene 2655746 2657455 . + . ID=gene-NDY24_11765;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=NDY24_11765 CP098602.1 Protein Homology CDS 2655746 2657455 . + 0 ID=cds-UUF00382.1;Parent=gene-NDY24_11765;Dbxref=NCBI_GP:UUF00382.1;Name=UUF00382.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089006.1;locus_tag=NDY24_11765;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=UUF00382.1;transl_table=11 CP098602.1 Genbank gene 2657503 2658945 . + . ID=gene-NDY24_11770;Name=NDY24_11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11770 CP098602.1 Protein Homology CDS 2657503 2658945 . + 0 ID=cds-UUE96680.1;Parent=gene-NDY24_11770;Dbxref=NCBI_GP:UUE96680.1;Name=UUE96680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156414.1;locus_tag=NDY24_11770;product=ATP-binding protein;protein_id=UUE96680.1;transl_table=11 CP098602.1 Genbank gene 2658930 2660267 . + . ID=gene-NDY24_11775;Name=NDY24_11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11775 CP098602.1 Protein Homology CDS 2658930 2660267 . + 0 ID=cds-UUE96681.1;Parent=gene-NDY24_11775;Dbxref=NCBI_GP:UUE96681.1;Name=UUE96681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966360.1;locus_tag=NDY24_11775;product=sigma-54 dependent transcriptional regulator;protein_id=UUE96681.1;transl_table=11 CP098602.1 Genbank gene 2660632 2661432 . + . ID=gene-NDY24_11780;Name=NDY24_11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11780 CP098602.1 Protein Homology CDS 2660632 2661432 . + 0 ID=cds-UUE96682.1;Parent=gene-NDY24_11780;Dbxref=NCBI_GP:UUE96682.1;Name=UUE96682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509445.1;locus_tag=NDY24_11780;product=hypothetical protein;protein_id=UUE96682.1;transl_table=11 CP098602.1 Genbank gene 2661565 2662179 . + . ID=gene-NDY24_11785;Name=NDY24_11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11785 CP098602.1 Protein Homology CDS 2661565 2662179 . + 0 ID=cds-UUE96683.1;Parent=gene-NDY24_11785;Dbxref=NCBI_GP:UUE96683.1;Name=UUE96683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966364.1;locus_tag=NDY24_11785;product=hypothetical protein;protein_id=UUE96683.1;transl_table=11 CP098602.1 Genbank pseudogene 2662284 2663512 . + . ID=gene-NDY24_11790;Name=NDY24_11790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_11790;pseudo=true CP098602.1 Protein Homology CDS 2662284 2663512 . + 0 ID=cds-NDY24_11790;Parent=gene-NDY24_11790;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451116.1;locus_tag=NDY24_11790;product=MFS transporter;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2663668 2664144 . - . ID=gene-NDY24_11795;Name=NDY24_11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11795 CP098602.1 Protein Homology CDS 2663668 2664144 . - 0 ID=cds-UUE96684.1;Parent=gene-NDY24_11795;Dbxref=NCBI_GP:UUE96684.1;Name=UUE96684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301073.1;locus_tag=NDY24_11795;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=UUE96684.1;transl_table=11 CP098602.1 Genbank gene 2664171 2664632 . - . ID=gene-NDY24_11800;Name=NDY24_11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11800 CP098602.1 Protein Homology CDS 2664171 2664632 . - 0 ID=cds-UUE96685.1;Parent=gene-NDY24_11800;Dbxref=NCBI_GP:UUE96685.1;Name=UUE96685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912218.1;locus_tag=NDY24_11800;product=hypothetical protein;protein_id=UUE96685.1;transl_table=11 CP098602.1 Genbank gene 2665030 2665350 . + . ID=gene-NDY24_11805;Name=NDY24_11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11805 CP098602.1 Protein Homology CDS 2665030 2665350 . + 0 ID=cds-UUE96686.1;Parent=gene-NDY24_11805;Dbxref=NCBI_GP:UUE96686.1;Name=UUE96686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488921.1;locus_tag=NDY24_11805;product=DUF4156 domain-containing protein;protein_id=UUE96686.1;transl_table=11 CP098602.1 Genbank gene 2665452 2666468 . + . ID=gene-NDY24_11810;Name=NDY24_11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11810 CP098602.1 Protein Homology CDS 2665452 2666468 . + 0 ID=cds-UUE96687.1;Parent=gene-NDY24_11810;Dbxref=NCBI_GP:UUE96687.1;Name=UUE96687.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809874.1;locus_tag=NDY24_11810;product=3-oxoacyl-ACP synthase III;protein_id=UUE96687.1;transl_table=11 CP098602.1 Genbank pseudogene 2666641 2667759 . + . ID=gene-NDY24_11815;Name=NDY24_11815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_11815;pseudo=true CP098602.1 Protein Homology CDS 2666641 2667759 . + 0 ID=cds-NDY24_11815;Parent=gene-NDY24_11815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501535.1;locus_tag=NDY24_11815;product=Fic family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2667899 2668801 . + . ID=gene-NDY24_11820;Name=NDY24_11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11820 CP098602.1 Protein Homology CDS 2667899 2668801 . + 0 ID=cds-UUE96688.1;Parent=gene-NDY24_11820;Dbxref=NCBI_GP:UUE96688.1;Name=UUE96688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849672.1;locus_tag=NDY24_11820;product=alpha/beta fold hydrolase;protein_id=UUE96688.1;transl_table=11 CP098602.1 Genbank gene 2668946 2669329 . - . ID=gene-NDY24_11825;Name=NDY24_11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11825 CP098602.1 Protein Homology CDS 2668946 2669329 . - 0 ID=cds-UUE96689.1;Parent=gene-NDY24_11825;Dbxref=NCBI_GP:UUE96689.1;Name=UUE96689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849671.1;locus_tag=NDY24_11825;product=YkgJ family cysteine cluster protein;protein_id=UUE96689.1;transl_table=11 CP098602.1 Genbank gene 2669647 2671302 . + . ID=gene-NDY24_11830;Name=oleC;gbkey=Gene;gene=oleC;gene_biotype=protein_coding;locus_tag=NDY24_11830 CP098602.1 Protein Homology CDS 2669647 2671302 . + 0 ID=cds-UUE96690.1;Parent=gene-NDY24_11830;Dbxref=NCBI_GP:UUE96690.1;Name=UUE96690.1;gbkey=CDS;gene=oleC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451108.1;locus_tag=NDY24_11830;product=olefin beta-lactone synthetase OleC;protein_id=UUE96690.1;transl_table=11 CP098602.1 Genbank gene 2671311 2672864 . + . ID=gene-NDY24_11835;Name=NDY24_11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11835 CP098602.1 Protein Homology CDS 2671311 2672864 . + 0 ID=cds-UUE96691.1;Parent=gene-NDY24_11835;Dbxref=NCBI_GP:UUE96691.1;Name=UUE96691.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451107.1;locus_tag=NDY24_11835;product=winged helix-turn-helix domain-containing protein;protein_id=UUE96691.1;transl_table=11 CP098602.1 Genbank gene 2673522 2673968 . - . ID=gene-NDY24_11840;Name=NDY24_11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11840 CP098602.1 Protein Homology CDS 2673522 2673968 . - 0 ID=cds-UUE96692.1;Parent=gene-NDY24_11840;Dbxref=NCBI_GP:UUE96692.1;Name=UUE96692.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012371.2;locus_tag=NDY24_11840;product=serine hydrolase;protein_id=UUE96692.1;transl_table=11 CP098602.1 Genbank gene 2673908 2674762 . - . ID=gene-NDY24_11845;Name=NDY24_11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11845 CP098602.1 Protein Homology CDS 2673908 2674762 . - 0 ID=cds-UUE96693.1;Parent=gene-NDY24_11845;Dbxref=NCBI_GP:UUE96693.1;Name=UUE96693.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012371.2;locus_tag=NDY24_11845;product=beta-lactamase family protein;protein_id=UUE96693.1;transl_table=11 CP098602.1 Genbank gene 2674961 2675971 . + . ID=gene-NDY24_11850;Name=NDY24_11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11850 CP098602.1 Protein Homology CDS 2674961 2675971 . + 0 ID=cds-UUE96694.1;Parent=gene-NDY24_11850;Dbxref=NCBI_GP:UUE96694.1;Name=UUE96694.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912231.1;locus_tag=NDY24_11850;product=NAD-dependent epimerase/dehydratase family protein;protein_id=UUE96694.1;transl_table=11 CP098602.1 Genbank gene 2676036 2676194 . + . ID=gene-NDY24_11855;Name=NDY24_11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11855 CP098602.1 Protein Homology CDS 2676036 2676194 . + 0 ID=cds-UUE96695.1;Parent=gene-NDY24_11855;Dbxref=NCBI_GP:UUE96695.1;Name=UUE96695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260548.1;locus_tag=NDY24_11855;product=DUF1328 domain-containing protein;protein_id=UUE96695.1;transl_table=11 CP098602.1 Genbank gene 2676313 2676795 . - . ID=gene-NDY24_11860;Name=NDY24_11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11860 CP098602.1 Protein Homology CDS 2676313 2676795 . - 0 ID=cds-UUE96696.1;Parent=gene-NDY24_11860;Dbxref=NCBI_GP:UUE96696.1;Name=UUE96696.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016944694.1;locus_tag=NDY24_11860;product=GNAT family N-acetyltransferase;protein_id=UUE96696.1;transl_table=11 CP098602.1 Genbank gene 2676795 2677898 . - . ID=gene-NDY24_11865;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=NDY24_11865 CP098602.1 Protein Homology CDS 2676795 2677898 . - 0 ID=cds-UUE96697.1;Parent=gene-NDY24_11865;Dbxref=NCBI_GP:UUE96697.1;Name=UUE96697.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449822.1;locus_tag=NDY24_11865;product=D-alanine--D-alanine ligase;protein_id=UUE96697.1;transl_table=11 CP098602.1 Genbank gene 2678093 2678737 . + . ID=gene-NDY24_11870;Name=NDY24_11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11870 CP098602.1 Protein Homology CDS 2678093 2678737 . + 0 ID=cds-UUE96698.1;Parent=gene-NDY24_11870;Dbxref=NCBI_GP:UUE96698.1;Name=UUE96698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156427.1;locus_tag=NDY24_11870;product=SCP2 sterol-binding domain-containing protein;protein_id=UUE96698.1;transl_table=11 CP098602.1 Genbank gene 2678734 2680407 . + . ID=gene-NDY24_11875;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=NDY24_11875 CP098602.1 Protein Homology CDS 2678734 2680407 . + 0 ID=cds-UUE96699.1;Parent=gene-NDY24_11875;Dbxref=NCBI_GP:UUE96699.1;Name=UUE96699.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304665.1;locus_tag=NDY24_11875;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=UUE96699.1;transl_table=11 CP098602.1 Genbank gene 2680456 2681277 . + . ID=gene-NDY24_11880;Name=NDY24_11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11880 CP098602.1 Protein Homology CDS 2680456 2681277 . + 0 ID=cds-UUF00383.1;Parent=gene-NDY24_11880;Dbxref=NCBI_GP:UUF00383.1;Name=UUF00383.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156430.1;locus_tag=NDY24_11880;product=pseudouridine synthase;protein_id=UUF00383.1;transl_table=11 CP098602.1 Genbank gene 2681676 2682254 . - . ID=gene-NDY24_11885;Name=NDY24_11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11885 CP098602.1 Protein Homology CDS 2681676 2682254 . - 0 ID=cds-UUF00384.1;Parent=gene-NDY24_11885;Dbxref=NCBI_GP:UUF00384.1;Name=UUF00384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966404.1;locus_tag=NDY24_11885;product=DUF2059 domain-containing protein;protein_id=UUF00384.1;transl_table=11 CP098602.1 Genbank gene 2682310 2682741 . + . ID=gene-NDY24_11890;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=NDY24_11890 CP098602.1 Protein Homology CDS 2682310 2682741 . + 0 ID=cds-UUE96700.1;Parent=gene-NDY24_11890;Dbxref=NCBI_GP:UUE96700.1;Name=UUE96700.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257289.1;locus_tag=NDY24_11890;product=aminoacyl-tRNA hydrolase;protein_id=UUE96700.1;transl_table=11 CP098602.1 Genbank gene 2682744 2683373 . + . ID=gene-NDY24_11895;Name=NDY24_11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11895 CP098602.1 Protein Homology CDS 2682744 2683373 . + 0 ID=cds-UUE96701.1;Parent=gene-NDY24_11895;Dbxref=NCBI_GP:UUE96701.1;Name=UUE96701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035483.1;locus_tag=NDY24_11895;product=lysophosphatidylcholine acyltransferase;protein_id=UUE96701.1;transl_table=11 CP098602.1 Genbank pseudogene 2683472 2684490 . + . ID=gene-NDY24_11900;Name=NDY24_11900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_11900;pseudo=true CP098602.1 Protein Homology CDS 2683472 2684490 . + 0 ID=cds-NDY24_11900;Parent=gene-NDY24_11900;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117620.1;locus_tag=NDY24_11900;product=isoaspartyl peptidase/L-asparaginase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 2684605 2686664 . + . ID=gene-NDY24_11905;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=pseudogene;locus_tag=NDY24_11905;pseudo=true CP098602.1 Protein Homology CDS 2684605 2686664 . + 0 ID=cds-NDY24_11905;Parent=gene-NDY24_11905;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115821.1;locus_tag=NDY24_11905;product=peptidyl-dipeptidase Dcp;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 2686737 2688897 . - . ID=gene-NDY24_11910;Name=NDY24_11910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_11910;pseudo=true CP098602.1 Protein Homology CDS 2686737 2688897 . - 0 ID=cds-NDY24_11910;Parent=gene-NDY24_11910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115822.1;locus_tag=NDY24_11910;product=type III secretion system effector protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2689308 2690363 . - . ID=gene-NDY24_11915;Name=NDY24_11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11915 CP098602.1 Protein Homology CDS 2689308 2690363 . - 0 ID=cds-UUE96702.1;Parent=gene-NDY24_11915;Dbxref=NCBI_GP:UUE96702.1;Name=UUE96702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117616.1;locus_tag=NDY24_11915;product=MBL fold metallo-hydrolase;protein_id=UUE96702.1;transl_table=11 CP098602.1 Genbank gene 2690595 2691239 . + . ID=gene-NDY24_11920;Name=NDY24_11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11920 CP098602.1 Protein Homology CDS 2690595 2691239 . + 0 ID=cds-UUE96703.1;Parent=gene-NDY24_11920;Dbxref=NCBI_GP:UUE96703.1;Name=UUE96703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005928578.1;locus_tag=NDY24_11920;product=TetR/AcrR family transcriptional regulator;protein_id=UUE96703.1;transl_table=11 CP098602.1 Genbank gene 2691247 2691597 . - . ID=gene-NDY24_11925;Name=NDY24_11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11925 CP098602.1 Protein Homology CDS 2691247 2691597 . - 0 ID=cds-UUE96704.1;Parent=gene-NDY24_11925;Dbxref=NCBI_GP:UUE96704.1;Name=UUE96704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966411.1;locus_tag=NDY24_11925;product=VOC family protein;protein_id=UUE96704.1;transl_table=11 CP098602.1 Genbank pseudogene 2691667 2692268 . - . ID=gene-NDY24_11930;Name=NDY24_11930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_11930;pseudo=true CP098602.1 Protein Homology CDS 2691667 2692268 . - 0 ID=cds-NDY24_11930;Parent=gene-NDY24_11930;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156440.1;locus_tag=NDY24_11930;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2692423 2693685 . - . ID=gene-NDY24_11935;Name=NDY24_11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11935 CP098602.1 Protein Homology CDS 2692423 2693685 . - 0 ID=cds-UUE96705.1;Parent=gene-NDY24_11935;Dbxref=NCBI_GP:UUE96705.1;Name=UUE96705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117614.1;locus_tag=NDY24_11935;product=cation:proton antiporter;protein_id=UUE96705.1;transl_table=11 CP098602.1 Genbank gene 2694079 2695035 . - . ID=gene-NDY24_11940;Name=NDY24_11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11940 CP098602.1 Protein Homology CDS 2694079 2695035 . - 0 ID=cds-UUE96706.1;Parent=gene-NDY24_11940;Dbxref=NCBI_GP:UUE96706.1;Name=UUE96706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156442.1;locus_tag=NDY24_11940;product=LysR family transcriptional regulator;protein_id=UUE96706.1;transl_table=11 CP098602.1 Genbank gene 2695153 2696769 . + . ID=gene-NDY24_11945;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=NDY24_11945 CP098602.1 Protein Homology CDS 2695153 2696769 . + 0 ID=cds-UUE96707.1;Parent=gene-NDY24_11945;Dbxref=NCBI_GP:UUE96707.1;Name=UUE96707.1;Ontology_term=GO:0006099,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156443.1;locus_tag=NDY24_11945;product=malate synthase A;protein_id=UUE96707.1;transl_table=11 CP098602.1 Genbank gene 2696962 2698257 . + . ID=gene-NDY24_11950;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=NDY24_11950 CP098602.1 Protein Homology CDS 2696962 2698257 . + 0 ID=cds-UUE96708.1;Parent=gene-NDY24_11950;Dbxref=NCBI_GP:UUE96708.1;Name=UUE96708.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011345976.1;locus_tag=NDY24_11950;product=isocitrate lyase;protein_id=UUE96708.1;transl_table=11 CP098602.1 Genbank gene 2698512 2699588 . + . ID=gene-NDY24_11955;Name=NDY24_11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11955 CP098602.1 Protein Homology CDS 2698512 2699588 . + 0 ID=cds-UUE96709.1;Parent=gene-NDY24_11955;Dbxref=NCBI_GP:UUE96709.1;Name=UUE96709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450098.1;locus_tag=NDY24_11955;product=GGDEF domain-containing protein;protein_id=UUE96709.1;transl_table=11 CP098602.1 Genbank pseudogene 2699592 2702243 . + . ID=gene-NDY24_11960;Name=NDY24_11960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_11960;pseudo=true CP098602.1 Protein Homology CDS 2699592 2702243 . + 0 ID=cds-NDY24_11960;Parent=gene-NDY24_11960;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370482.1;locus_tag=NDY24_11960;product=putative peptide modification system cyclase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2702183 2702521 . - . ID=gene-NDY24_11965;Name=NDY24_11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11965 CP098602.1 Protein Homology CDS 2702183 2702521 . - 0 ID=cds-UUE96710.1;Parent=gene-NDY24_11965;Dbxref=NCBI_GP:UUE96710.1;Name=UUE96710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921144.1;locus_tag=NDY24_11965;product=NHLP-related RiPP peptide;protein_id=UUE96710.1;transl_table=11 CP098602.1 Genbank gene 2702615 2703823 . + . ID=gene-NDY24_11970;Name=NDY24_11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11970 CP098602.1 Protein Homology CDS 2702615 2703823 . + 0 ID=cds-UUE96711.1;Parent=gene-NDY24_11970;Dbxref=NCBI_GP:UUE96711.1;Name=UUE96711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450095.1;locus_tag=NDY24_11970;product=putative peptide maturation dehydrogenase;protein_id=UUE96711.1;transl_table=11 CP098602.1 Genbank gene 2703997 2706081 . - . ID=gene-NDY24_11975;Name=NDY24_11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11975 CP098602.1 Protein Homology CDS 2703997 2706081 . - 0 ID=cds-UUE96712.1;Parent=gene-NDY24_11975;Dbxref=NCBI_GP:UUE96712.1;Name=UUE96712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572258.1;locus_tag=NDY24_11975;product=S9 family peptidase;protein_id=UUE96712.1;transl_table=11 CP098602.1 Genbank pseudogene 2706201 2708216 . - . ID=gene-NDY24_11980;Name=NDY24_11980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_11980;pseudo=true CP098602.1 Protein Homology CDS 2706201 2708216 . - 0 ID=cds-NDY24_11980;Parent=gene-NDY24_11980;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089033.1;locus_tag=NDY24_11980;product=acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2708282 2709895 . - . ID=gene-NDY24_11985;Name=NDY24_11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11985 CP098602.1 Protein Homology CDS 2708282 2709895 . - 0 ID=cds-UUF00385.1;Parent=gene-NDY24_11985;Dbxref=NCBI_GP:UUF00385.1;Name=UUF00385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437049.1;locus_tag=NDY24_11985;product=methylcrotonoyl-CoA carboxylase;protein_id=UUF00385.1;transl_table=11 CP098602.1 Genbank gene 2709903 2711066 . - . ID=gene-NDY24_11990;Name=NDY24_11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_11990 CP098602.1 Protein Homology CDS 2709903 2711066 . - 0 ID=cds-UUE96713.1;Parent=gene-NDY24_11990;Dbxref=NCBI_GP:UUE96713.1;Name=UUE96713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450091.1;locus_tag=NDY24_11990;product=isovaleryl-CoA dehydrogenase;protein_id=UUE96713.1;transl_table=11 CP098602.1 Genbank pseudogene 2711195 2711814 . + . ID=gene-NDY24_11995;Name=NDY24_11995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_11995;pseudo=true CP098602.1 Protein Homology CDS 2711195 2711814 . + 0 ID=cds-NDY24_11995;Parent=gene-NDY24_11995;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921138.1;locus_tag=NDY24_11995;product=TetR/AcrR family transcriptional regulator;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2711900 2712274 . + . ID=gene-NDY24_12000;Name=NDY24_12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12000 CP098602.1 Protein Homology CDS 2711900 2712274 . + 0 ID=cds-UUE96714.1;Parent=gene-NDY24_12000;Dbxref=NCBI_GP:UUE96714.1;Name=UUE96714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117610.1;locus_tag=NDY24_12000;product=DNA-binding protein;protein_id=UUE96714.1;transl_table=11 CP098602.1 Genbank gene 2712271 2712798 . + . ID=gene-NDY24_12005;Name=NDY24_12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12005 CP098602.1 Protein Homology CDS 2712271 2712798 . + 0 ID=cds-UUE96715.1;Parent=gene-NDY24_12005;Dbxref=NCBI_GP:UUE96715.1;Name=UUE96715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050204.1;locus_tag=NDY24_12005;product=RES family NAD+ phosphorylase;protein_id=UUE96715.1;transl_table=11 CP098602.1 Genbank gene 2712838 2713173 . - . ID=gene-NDY24_12010;Name=NDY24_12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12010 CP098602.1 Protein Homology CDS 2712838 2713173 . - 0 ID=cds-UUE96716.1;Parent=gene-NDY24_12010;Dbxref=NCBI_GP:UUE96716.1;Name=UUE96716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156920.1;locus_tag=NDY24_12010;product=DUF3325 domain-containing protein;protein_id=UUE96716.1;transl_table=11 CP098602.1 Genbank gene 2713170 2714780 . - . ID=gene-NDY24_12015;Name=NDY24_12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12015 CP098602.1 Protein Homology CDS 2713170 2714780 . - 0 ID=cds-UUE96717.1;Parent=gene-NDY24_12015;Dbxref=NCBI_GP:UUE96717.1;Name=UUE96717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488709.1;locus_tag=NDY24_12015;product=PepSY domain-containing protein;protein_id=UUE96717.1;transl_table=11 CP098602.1 Genbank gene 2714777 2715088 . - . ID=gene-NDY24_12020;Name=NDY24_12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12020 CP098602.1 Protein Homology CDS 2714777 2715088 . - 0 ID=cds-UUE96718.1;Parent=gene-NDY24_12020;Dbxref=NCBI_GP:UUE96718.1;Name=UUE96718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015462760.1;locus_tag=NDY24_12020;product=DUF3649 domain-containing protein;protein_id=UUE96718.1;transl_table=11 CP098602.1 Genbank gene 2715114 2715758 . - . ID=gene-NDY24_12025;Name=NDY24_12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12025 CP098602.1 Protein Homology CDS 2715114 2715758 . - 0 ID=cds-UUE96719.1;Parent=gene-NDY24_12025;Dbxref=NCBI_GP:UUE96719.1;Name=UUE96719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450084.1;locus_tag=NDY24_12025;product=DUF4198 domain-containing protein;protein_id=UUE96719.1;transl_table=11 CP098602.1 Genbank gene 2716130 2716648 . + . ID=gene-NDY24_12030;Name=NDY24_12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12030 CP098602.1 Protein Homology CDS 2716130 2716648 . + 0 ID=cds-UUE96720.1;Parent=gene-NDY24_12030;Dbxref=NCBI_GP:UUE96720.1;Name=UUE96720.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921137.1;locus_tag=NDY24_12030;product=c-type cytochrome;protein_id=UUE96720.1;transl_table=11 CP098602.1 Genbank gene 2716788 2718506 . + . ID=gene-NDY24_12035;Name=NDY24_12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12035 CP098602.1 Protein Homology CDS 2716788 2718506 . + 0 ID=cds-UUE96721.1;Parent=gene-NDY24_12035;Dbxref=NCBI_GP:UUE96721.1;Name=UUE96721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089040.1;locus_tag=NDY24_12035;product=ExeM/NucH family extracellular endonuclease;protein_id=UUE96721.1;transl_table=11 CP098602.1 Genbank pseudogene 2718639 2719016 . - . ID=gene-NDY24_12040;Name=NDY24_12040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_12040;pseudo=true CP098602.1 Protein Homology CDS 2718639 2719016 . - 0 ID=cds-NDY24_12040;Parent=gene-NDY24_12040;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011345989.1;locus_tag=NDY24_12040;product=MerC domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2719078 2720403 . + . ID=gene-NDY24_12045;Name=NDY24_12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12045 CP098602.1 Protein Homology CDS 2719078 2720403 . + 0 ID=cds-UUE96722.1;Parent=gene-NDY24_12045;Dbxref=NCBI_GP:UUE96722.1;Name=UUE96722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849151.1;locus_tag=NDY24_12045;product=GTP-binding protein;protein_id=UUE96722.1;transl_table=11 CP098602.1 Genbank gene 2720599 2721210 . - . ID=gene-NDY24_12050;Name=NDY24_12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12050 CP098602.1 Protein Homology CDS 2720599 2721210 . - 0 ID=cds-UUE96723.1;Parent=gene-NDY24_12050;Dbxref=NCBI_GP:UUE96723.1;Name=UUE96723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968308.1;locus_tag=NDY24_12050;product=type III secretion protein;protein_id=UUE96723.1;transl_table=11 CP098602.1 Genbank gene 2721947 2722393 . - . ID=gene-NDY24_12055;Name=NDY24_12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12055 CP098602.1 Protein Homology CDS 2721947 2722393 . - 0 ID=cds-UUE96724.1;Parent=gene-NDY24_12055;Dbxref=NCBI_GP:UUE96724.1;Name=UUE96724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005989052.1;locus_tag=NDY24_12055;product=hypothetical protein;protein_id=UUE96724.1;transl_table=11 CP098602.1 Genbank gene 2722826 2723698 . - . ID=gene-NDY24_12060;Name=NDY24_12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12060 CP098602.1 Protein Homology CDS 2722826 2723698 . - 0 ID=cds-UUF00386.1;Parent=gene-NDY24_12060;Dbxref=NCBI_GP:UUF00386.1;Name=UUF00386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379895.1;locus_tag=NDY24_12060;product=hypothetical protein;protein_id=UUF00386.1;transl_table=11 CP098602.1 Genbank gene 2723765 2724427 . + . ID=gene-NDY24_12065;Name=NDY24_12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12065 CP098602.1 Protein Homology CDS 2723765 2724427 . + 0 ID=cds-UUE96725.1;Parent=gene-NDY24_12065;Dbxref=NCBI_GP:UUE96725.1;Name=UUE96725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370426.1;locus_tag=NDY24_12065;product=alpha/beta hydrolase;protein_id=UUE96725.1;transl_table=11 CP098602.1 Genbank gene 2724513 2725607 . + . ID=gene-NDY24_12070;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=NDY24_12070 CP098602.1 Protein Homology CDS 2724513 2725607 . + 0 ID=cds-UUE96726.1;Parent=gene-NDY24_12070;Dbxref=NCBI_GP:UUE96726.1;Name=UUE96726.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974994.1;locus_tag=NDY24_12070;product=cell division protein ZapE;protein_id=UUE96726.1;transl_table=11 CP098602.1 Genbank gene 2725773 2726057 . - . ID=gene-NDY24_12075;Name=NDY24_12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12075 CP098602.1 GeneMarkS-2+ CDS 2725773 2726057 . - 0 ID=cds-UUE96727.1;Parent=gene-NDY24_12075;Dbxref=NCBI_GP:UUE96727.1;Name=UUE96727.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_12075;product=hypothetical protein;protein_id=UUE96727.1;transl_table=11 CP098602.1 Genbank gene 2726106 2726429 . - . ID=gene-NDY24_12080;Name=NDY24_12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12080 CP098602.1 GeneMarkS-2+ CDS 2726106 2726429 . - 0 ID=cds-UUE96728.1;Parent=gene-NDY24_12080;Dbxref=NCBI_GP:UUE96728.1;Name=UUE96728.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_12080;product=hypothetical protein;protein_id=UUE96728.1;transl_table=11 CP098602.1 Genbank gene 2726736 2727197 . + . ID=gene-NDY24_12085;Name=NDY24_12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12085 CP098602.1 Protein Homology CDS 2726736 2727197 . + 0 ID=cds-UUE96729.1;Parent=gene-NDY24_12085;Dbxref=NCBI_GP:UUE96729.1;Name=UUE96729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035518.1;locus_tag=NDY24_12085;product=MarR family transcriptional regulator;protein_id=UUE96729.1;transl_table=11 CP098602.1 Genbank gene 2727304 2727732 . + . ID=gene-NDY24_12090;Name=NDY24_12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12090 CP098602.1 Protein Homology CDS 2727304 2727732 . + 0 ID=cds-UUE96730.1;Parent=gene-NDY24_12090;Dbxref=NCBI_GP:UUE96730.1;Name=UUE96730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007509237.1;locus_tag=NDY24_12090;product=organic hydroperoxide resistance protein;protein_id=UUE96730.1;transl_table=11 CP098602.1 Genbank gene 2727897 2728598 . + . ID=gene-NDY24_12095;Name=NDY24_12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12095 CP098602.1 Protein Homology CDS 2727897 2728598 . + 0 ID=cds-UUE96731.1;Parent=gene-NDY24_12095;Dbxref=NCBI_GP:UUE96731.1;Name=UUE96731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968319.1;locus_tag=NDY24_12095;product=alpha/beta hydrolase;protein_id=UUE96731.1;transl_table=11 CP098602.1 Genbank gene 2728608 2729450 . - . ID=gene-NDY24_12100;Name=NDY24_12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12100 CP098602.1 Protein Homology CDS 2728608 2729450 . - 0 ID=cds-UUE96732.1;Parent=gene-NDY24_12100;Dbxref=NCBI_GP:UUE96732.1;Name=UUE96732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450069.1;locus_tag=NDY24_12100;product=YggN family protein;protein_id=UUE96732.1;transl_table=11 CP098602.1 Genbank gene 2729641 2730057 . + . ID=gene-NDY24_12105;Name=NDY24_12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12105 CP098602.1 Protein Homology CDS 2729641 2730057 . + 0 ID=cds-UUE96733.1;Parent=gene-NDY24_12105;Dbxref=NCBI_GP:UUE96733.1;Name=UUE96733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005928480.1;locus_tag=NDY24_12105;product=hypothetical protein;protein_id=UUE96733.1;transl_table=11 CP098602.1 Genbank gene 2730054 2730398 . - . ID=gene-NDY24_12110;Name=NDY24_12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12110 CP098602.1 GeneMarkS-2+ CDS 2730054 2730398 . - 0 ID=cds-UUE96734.1;Parent=gene-NDY24_12110;Dbxref=NCBI_GP:UUE96734.1;Name=UUE96734.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_12110;product=hypothetical protein;protein_id=UUE96734.1;transl_table=11 CP098602.1 Genbank gene 2730564 2731367 . - . ID=gene-NDY24_12115;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=NDY24_12115 CP098602.1 Protein Homology CDS 2730564 2731367 . - 0 ID=cds-UUE96735.1;Parent=gene-NDY24_12115;Dbxref=NCBI_GP:UUE96735.1;Name=UUE96735.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260799.1;locus_tag=NDY24_12115;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=UUE96735.1;transl_table=11 CP098602.1 Genbank gene 2731443 2732471 . - . ID=gene-NDY24_12120;Name=NDY24_12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12120 CP098602.1 Protein Homology CDS 2731443 2732471 . - 0 ID=cds-UUE96736.1;Parent=gene-NDY24_12120;Dbxref=NCBI_GP:UUE96736.1;Name=UUE96736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011345999.1;locus_tag=NDY24_12120;product=NADP-dependent oxidoreductase;protein_id=UUE96736.1;transl_table=11 CP098602.1 Genbank gene 2732584 2733555 . - . ID=gene-NDY24_12125;Name=NDY24_12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12125 CP098602.1 Protein Homology CDS 2732584 2733555 . - 0 ID=cds-UUE96737.1;Parent=gene-NDY24_12125;Dbxref=NCBI_GP:UUE96737.1;Name=UUE96737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379903.1;locus_tag=NDY24_12125;product=aldo/keto reductase;protein_id=UUE96737.1;transl_table=11 CP098602.1 Genbank gene 2733778 2734632 . + . ID=gene-NDY24_12130;Name=NDY24_12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12130 CP098602.1 Protein Homology CDS 2733778 2734632 . + 0 ID=cds-UUE96738.1;Parent=gene-NDY24_12130;Dbxref=NCBI_GP:UUE96738.1;Name=UUE96738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912328.1;locus_tag=NDY24_12130;product=methyltransferase;protein_id=UUE96738.1;transl_table=11 CP098602.1 Genbank gene 2734768 2735340 . + . ID=gene-NDY24_12135;Name=NDY24_12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12135 CP098602.1 Protein Homology CDS 2734768 2735340 . + 0 ID=cds-UUE96739.1;Parent=gene-NDY24_12135;Dbxref=NCBI_GP:UUE96739.1;Name=UUE96739.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156080.1;locus_tag=NDY24_12135;product=pseudouridine synthase;protein_id=UUE96739.1;transl_table=11 CP098602.1 Genbank gene 2735431 2735862 . - . ID=gene-NDY24_12140;Name=NDY24_12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12140 CP098602.1 Protein Homology CDS 2735431 2735862 . - 0 ID=cds-UUE96740.1;Parent=gene-NDY24_12140;Dbxref=NCBI_GP:UUE96740.1;Name=UUE96740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160523.1;locus_tag=NDY24_12140;product=hypothetical protein;protein_id=UUE96740.1;transl_table=11 CP098602.1 Genbank gene 2736168 2738669 . - . ID=gene-NDY24_12145;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=NDY24_12145 CP098602.1 Protein Homology CDS 2736168 2738669 . - 0 ID=cds-UUE96741.1;Parent=gene-NDY24_12145;Dbxref=NCBI_GP:UUE96741.1;Name=UUE96741.1;Ontology_term=GO:0006139,GO:0004386;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050223.1;locus_tag=NDY24_12145;product=ATP-dependent helicase HrpB;protein_id=UUE96741.1;transl_table=11 CP098602.1 Genbank gene 2738997 2740970 . + . ID=gene-NDY24_12150;Name=NDY24_12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12150 CP098602.1 Protein Homology CDS 2738997 2740970 . + 0 ID=cds-UUF00387.1;Parent=gene-NDY24_12150;Dbxref=NCBI_GP:UUF00387.1;Name=UUF00387.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035531.1;locus_tag=NDY24_12150;product=methyl-accepting chemotaxis protein;protein_id=UUF00387.1;transl_table=11 CP098602.1 Genbank gene 2742011 2742484 . - . ID=gene-NDY24_12155;Name=NDY24_12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12155 CP098602.1 Protein Homology CDS 2742011 2742484 . - 0 ID=cds-UUE96742.1;Parent=gene-NDY24_12155;Dbxref=NCBI_GP:UUE96742.1;Name=UUE96742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505316.1;locus_tag=NDY24_12155;product=DUF1456 family protein;protein_id=UUE96742.1;transl_table=11 CP098602.1 Genbank gene 2742589 2742948 . - . ID=gene-NDY24_12160;Name=uraH;gbkey=Gene;gene=uraH;gene_biotype=protein_coding;locus_tag=NDY24_12160 CP098602.1 Protein Homology CDS 2742589 2742948 . - 0 ID=cds-UUE96743.1;Parent=gene-NDY24_12160;Dbxref=NCBI_GP:UUE96743.1;Name=UUE96743.1;Ontology_term=GO:0019628;gbkey=CDS;gene=uraH;go_process=urate catabolic process|0019628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370375.1;locus_tag=NDY24_12160;product=hydroxyisourate hydrolase;protein_id=UUE96743.1;transl_table=11 CP098602.1 Genbank gene 2742918 2744339 . - . ID=gene-NDY24_12165;Name=hpyO;gbkey=Gene;gene=hpyO;gene_biotype=protein_coding;locus_tag=NDY24_12165 CP098602.1 Protein Homology CDS 2742918 2744339 . - 0 ID=cds-UUE96744.1;Parent=gene-NDY24_12165;Dbxref=NCBI_GP:UUE96744.1;Name=UUE96744.1;gbkey=CDS;gene=hpyO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509374.1;locus_tag=NDY24_12165;product=FAD-dependent urate hydroxylase HpyO;protein_id=UUE96744.1;transl_table=11 CP098602.1 Genbank gene 2744336 2744827 . - . ID=gene-NDY24_12170;Name=uraD;gbkey=Gene;gene=uraD;gene_biotype=protein_coding;locus_tag=NDY24_12170 CP098602.1 Protein Homology CDS 2744336 2744827 . - 0 ID=cds-UUE96745.1;Parent=gene-NDY24_12170;Dbxref=NCBI_GP:UUE96745.1;Name=UUE96745.1;Ontology_term=GO:0019628;gbkey=CDS;gene=uraD;go_process=urate catabolic process|0019628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572333.1;locus_tag=NDY24_12170;product=2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase;protein_id=UUE96745.1;transl_table=11 CP098602.1 Genbank gene 2744824 2745219 . - . ID=gene-NDY24_12175;Name=hpxZ;gbkey=Gene;gene=hpxZ;gene_biotype=protein_coding;locus_tag=NDY24_12175 CP098602.1 Protein Homology CDS 2744824 2745219 . - 0 ID=cds-UUE96746.1;Parent=gene-NDY24_12175;Dbxref=NCBI_GP:UUE96746.1;Name=UUE96746.1;gbkey=CDS;gene=hpxZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450976.1;locus_tag=NDY24_12175;product=oxalurate catabolism protein HpxZ;protein_id=UUE96746.1;transl_table=11 CP098602.1 Genbank gene 2745216 2746106 . - . ID=gene-NDY24_12180;Name=puuE;gbkey=Gene;gene=puuE;gene_biotype=protein_coding;locus_tag=NDY24_12180 CP098602.1 Protein Homology CDS 2745216 2746106 . - 0 ID=cds-UUE96747.1;Parent=gene-NDY24_12180;Dbxref=NCBI_GP:UUE96747.1;Name=UUE96747.1;Ontology_term=GO:0000256,GO:0016810;gbkey=CDS;gene=puuE;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156075.1;locus_tag=NDY24_12180;product=allantoinase PuuE;protein_id=UUE96747.1;transl_table=11 CP098602.1 Genbank gene 2746103 2747359 . - . ID=gene-NDY24_12185;Name=NDY24_12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12185 CP098602.1 Protein Homology CDS 2746103 2747359 . - 0 ID=cds-UUE96748.1;Parent=gene-NDY24_12185;Dbxref=NCBI_GP:UUE96748.1;Name=UUE96748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379922.1;locus_tag=NDY24_12185;product=alanine--glyoxylate aminotransferase family protein;protein_id=UUE96748.1;transl_table=11 CP098602.1 Genbank gene 2747349 2748623 . - . ID=gene-NDY24_12190;Name=NDY24_12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12190 CP098602.1 Protein Homology CDS 2747349 2748623 . - 0 ID=cds-UUE96749.1;Parent=gene-NDY24_12190;Dbxref=NCBI_GP:UUE96749.1;Name=UUE96749.1;Ontology_term=GO:0016813;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amidines|0016813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450979.1;locus_tag=NDY24_12190;product=allantoate amidohydrolase;protein_id=UUE96749.1;transl_table=11 CP098602.1 Genbank gene 2749395 2750288 . + . ID=gene-NDY24_12195;Name=NDY24_12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12195 CP098602.1 Protein Homology CDS 2749395 2750288 . + 0 ID=cds-UUE96750.1;Parent=gene-NDY24_12195;Dbxref=NCBI_GP:UUE96750.1;Name=UUE96750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015471607.1;locus_tag=NDY24_12195;product=LysR family transcriptional regulator;protein_id=UUE96750.1;transl_table=11 CP098602.1 Genbank gene 2750608 2751807 . + . ID=gene-NDY24_12200;Name=NDY24_12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12200 CP098602.1 Protein Homology CDS 2750608 2751807 . + 0 ID=cds-UUE96751.1;Parent=gene-NDY24_12200;Dbxref=NCBI_GP:UUE96751.1;Name=UUE96751.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915170.1;locus_tag=NDY24_12200;product=MFS transporter;protein_id=UUE96751.1;transl_table=11 CP098602.1 Genbank gene 2751901 2752791 . - . ID=gene-NDY24_12205;Name=NDY24_12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12205 CP098602.1 Protein Homology CDS 2751901 2752791 . - 0 ID=cds-UUE96752.1;Parent=gene-NDY24_12205;Dbxref=NCBI_GP:UUE96752.1;Name=UUE96752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975014.1;locus_tag=NDY24_12205;product=LysR family transcriptional regulator;protein_id=UUE96752.1;transl_table=11 CP098602.1 Genbank gene 2753014 2754072 . + . ID=gene-NDY24_12210;Name=NDY24_12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12210 CP098602.1 Protein Homology CDS 2753014 2754072 . + 0 ID=cds-UUE96753.1;Parent=gene-NDY24_12210;Dbxref=NCBI_GP:UUE96753.1;Name=UUE96753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901432.1;locus_tag=NDY24_12210;product=alpha/beta hydrolase;protein_id=UUE96753.1;transl_table=11 CP098602.1 Genbank pseudogene 2754187 2756691 . + . ID=gene-NDY24_12215;Name=NDY24_12215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_12215;pseudo=true CP098602.1 Protein Homology CDS 2754187 2756691 . + 0 ID=cds-NDY24_12215;Parent=gene-NDY24_12215;Note=internal stop;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009607500.1;locus_tag=NDY24_12215;product=prolyl oligopeptidase family serine peptidase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2756842 2758134 . - . ID=gene-NDY24_12220;Name=NDY24_12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12220 CP098602.1 GeneMarkS-2+ CDS 2756842 2758134 . - 0 ID=cds-UUE96754.1;Parent=gene-NDY24_12220;Dbxref=NCBI_GP:UUE96754.1;Name=UUE96754.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_12220;product=hypothetical protein;protein_id=UUE96754.1;transl_table=11 CP098602.1 Genbank gene 2758241 2758435 . - . ID=gene-NDY24_12225;Name=NDY24_12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12225 CP098602.1 GeneMarkS-2+ CDS 2758241 2758435 . - 0 ID=cds-UUE96755.1;Parent=gene-NDY24_12225;Dbxref=NCBI_GP:UUE96755.1;Name=UUE96755.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_12225;product=hypothetical protein;protein_id=UUE96755.1;transl_table=11 CP098602.1 Genbank gene 2758621 2759079 . - . ID=gene-NDY24_12230;Name=NDY24_12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12230 CP098602.1 Protein Homology CDS 2758621 2759079 . - 0 ID=cds-UUE96756.1;Parent=gene-NDY24_12230;Dbxref=NCBI_GP:UUE96756.1;Name=UUE96756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968357.1;locus_tag=NDY24_12230;product=gas vesicle protein;protein_id=UUE96756.1;transl_table=11 CP098602.1 Genbank gene 2759762 2760052 . + . ID=gene-NDY24_12235;Name=NDY24_12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12235 CP098602.1 GeneMarkS-2+ CDS 2759762 2760052 . + 0 ID=cds-UUE96757.1;Parent=gene-NDY24_12235;Dbxref=NCBI_GP:UUE96757.1;Name=UUE96757.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_12235;product=UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase;protein_id=UUE96757.1;transl_table=11 CP098602.1 Genbank gene 2760143 2761123 . - . ID=gene-NDY24_12240;Name=NDY24_12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12240 CP098602.1 Protein Homology CDS 2760143 2761123 . - 0 ID=cds-UUE96758.1;Parent=gene-NDY24_12240;Dbxref=NCBI_GP:UUE96758.1;Name=UUE96758.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=NDY24_12240;product=IS5 family transposase;protein_id=UUE96758.1;transl_table=11 CP098602.1 Genbank gene 2761312 2762291 . - . ID=gene-NDY24_12245;Name=NDY24_12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12245 CP098602.1 Protein Homology CDS 2761901 2762291 . - 0 ID=cds-UUE96759.1;Parent=gene-NDY24_12245;Dbxref=NCBI_GP:UUE96759.1;Name=UUE96759.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=NDY24_12245;product=IS5 family transposase;protein_id=UUE96759.1;transl_table=11 CP098602.1 Protein Homology CDS 2761312 2761901 . - 2 ID=cds-UUE96759.1;Parent=gene-NDY24_12245;Dbxref=NCBI_GP:UUE96759.1;Name=UUE96759.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=NDY24_12245;product=IS5 family transposase;protein_id=UUE96759.1;transl_table=11 CP098602.1 Genbank gene 2762645 2763526 . + . ID=gene-NDY24_12250;Name=NDY24_12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12250 CP098602.1 GeneMarkS-2+ CDS 2762645 2763526 . + 0 ID=cds-UUE96760.1;Parent=gene-NDY24_12250;Dbxref=NCBI_GP:UUE96760.1;Name=UUE96760.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_12250;product=hypothetical protein;protein_id=UUE96760.1;transl_table=11 CP098602.1 Genbank gene 2763647 2765500 . - . ID=gene-NDY24_12255;Name=NDY24_12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12255 CP098602.1 Protein Homology CDS 2763647 2765500 . - 0 ID=cds-UUE96761.1;Parent=gene-NDY24_12255;Dbxref=NCBI_GP:UUE96761.1;Name=UUE96761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449189.1;locus_tag=NDY24_12255;product=hypothetical protein;protein_id=UUE96761.1;transl_table=11 CP098602.1 Genbank gene 2765515 2766045 . - . ID=gene-NDY24_12260;Name=NDY24_12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12260 CP098602.1 GeneMarkS-2+ CDS 2765515 2766045 . - 0 ID=cds-UUE96762.1;Parent=gene-NDY24_12260;Dbxref=NCBI_GP:UUE96762.1;Name=UUE96762.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_12260;product=hypothetical protein;protein_id=UUE96762.1;transl_table=11 CP098602.1 Genbank gene 2766276 2767856 . - . ID=gene-NDY24_12265;Name=NDY24_12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12265 CP098602.1 Protein Homology CDS 2766276 2767856 . - 0 ID=cds-UUE96763.1;Parent=gene-NDY24_12265;Dbxref=NCBI_GP:UUE96763.1;Name=UUE96763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156069.1;locus_tag=NDY24_12265;product=gamma-glutamyltransferase family protein;protein_id=UUE96763.1;transl_table=11 CP098602.1 Genbank gene 2767856 2769316 . - . ID=gene-NDY24_12270;Name=NDY24_12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12270 CP098602.1 Protein Homology CDS 2767856 2769316 . - 0 ID=cds-UUE96764.1;Parent=gene-NDY24_12270;Dbxref=NCBI_GP:UUE96764.1;Name=UUE96764.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035547.1;locus_tag=NDY24_12270;product=AtzE family amidohydrolase;protein_id=UUE96764.1;transl_table=11 CP098602.1 Genbank pseudogene 2769480 2770613 . - . ID=gene-NDY24_12275;Name=NDY24_12275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_12275;pseudo=true CP098602.1 Protein Homology CDS 2769480 2770613 . - 0 ID=cds-NDY24_12275;Parent=gene-NDY24_12275;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450044.1;locus_tag=NDY24_12275;product=nucleoside hydrolase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2770760 2772328 . - . ID=gene-NDY24_12280;Name=NDY24_12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12280 CP098602.1 Protein Homology CDS 2770760 2772328 . - 0 ID=cds-UUE96765.1;Parent=gene-NDY24_12280;Dbxref=NCBI_GP:UUE96765.1;Name=UUE96765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437080.1;locus_tag=NDY24_12280;product=adenosine deaminase;protein_id=UUE96765.1;transl_table=11 CP098602.1 Genbank gene 2772447 2773760 . - . ID=gene-NDY24_12285;Name=NDY24_12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12285 CP098602.1 Protein Homology CDS 2772447 2773760 . - 0 ID=cds-UUF00388.1;Parent=gene-NDY24_12285;Dbxref=NCBI_GP:UUF00388.1;Name=UUF00388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363907.1;locus_tag=NDY24_12285;product=NCS2 family permease;protein_id=UUF00388.1;transl_table=11 CP098602.1 Genbank pseudogene 2774161 2775119 . - . ID=gene-NDY24_12290;Name=NDY24_12290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_12290;pseudo=true CP098602.1 Protein Homology CDS 2774161 2775119 . - 0 ID=cds-NDY24_12290;Parent=gene-NDY24_12290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489422.1;locus_tag=NDY24_12290;product=PDR/VanB family oxidoreductase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2775137 2776189 . - . ID=gene-NDY24_12295;Name=NDY24_12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12295 CP098602.1 Protein Homology CDS 2775137 2776189 . - 0 ID=cds-UUE96766.1;Parent=gene-NDY24_12295;Dbxref=NCBI_GP:UUE96766.1;Name=UUE96766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450040.1;locus_tag=NDY24_12295;product=aromatic ring-hydroxylating dioxygenase subunit alpha;protein_id=UUE96766.1;transl_table=11 CP098602.1 Genbank gene 2776317 2777234 . + . ID=gene-NDY24_12300;Name=NDY24_12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12300 CP098602.1 Protein Homology CDS 2776317 2777234 . + 0 ID=cds-UUE96767.1;Parent=gene-NDY24_12300;Dbxref=NCBI_GP:UUE96767.1;Name=UUE96767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016944217.1;locus_tag=NDY24_12300;product=LysR family transcriptional regulator;protein_id=UUE96767.1;transl_table=11 CP098602.1 Genbank gene 2777489 2778295 . + . ID=gene-NDY24_12305;Name=NDY24_12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12305 CP098602.1 Protein Homology CDS 2777489 2778295 . + 0 ID=cds-UUE96768.1;Parent=gene-NDY24_12305;Dbxref=NCBI_GP:UUE96768.1;Name=UUE96768.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802671.1;locus_tag=NDY24_12305;product=TatD family hydrolase;protein_id=UUE96768.1;transl_table=11 CP098602.1 Genbank gene 2778314 2778982 . - . ID=gene-NDY24_12310;Name=NDY24_12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12310 CP098602.1 Protein Homology CDS 2778314 2778982 . - 0 ID=cds-UUE96769.1;Parent=gene-NDY24_12310;Dbxref=NCBI_GP:UUE96769.1;Name=UUE96769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016848809.1;locus_tag=NDY24_12310;product=hypothetical protein;protein_id=UUE96769.1;transl_table=11 CP098602.1 Genbank gene 2779130 2780065 . - . ID=gene-NDY24_12315;Name=NDY24_12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12315 CP098602.1 Protein Homology CDS 2779130 2780065 . - 0 ID=cds-UUE96770.1;Parent=gene-NDY24_12315;Dbxref=NCBI_GP:UUE96770.1;Name=UUE96770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167667.1;locus_tag=NDY24_12315;product=LysR family transcriptional regulator;protein_id=UUE96770.1;transl_table=11 CP098602.1 Genbank gene 2780163 2781452 . + . ID=gene-NDY24_12320;Name=NDY24_12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12320 CP098602.1 Protein Homology CDS 2780163 2781452 . + 0 ID=cds-UUE96771.1;Parent=gene-NDY24_12320;Dbxref=NCBI_GP:UUE96771.1;Name=UUE96771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015471612.1;locus_tag=NDY24_12320;product=MFS transporter;protein_id=UUE96771.1;transl_table=11 CP098602.1 Genbank gene 2781508 2781945 . - . ID=gene-NDY24_12325;Name=NDY24_12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12325 CP098602.1 Protein Homology CDS 2781508 2781945 . - 0 ID=cds-UUE96772.1;Parent=gene-NDY24_12325;Dbxref=NCBI_GP:UUE96772.1;Name=UUE96772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968372.1;locus_tag=NDY24_12325;product=MerR family transcriptional regulator;protein_id=UUE96772.1;transl_table=11 CP098602.1 Genbank gene 2782035 2782970 . + . ID=gene-NDY24_12330;Name=NDY24_12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12330 CP098602.1 Protein Homology CDS 2782035 2782970 . + 0 ID=cds-UUE96773.1;Parent=gene-NDY24_12330;Dbxref=NCBI_GP:UUE96773.1;Name=UUE96773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975045.1;locus_tag=NDY24_12330;product=alpha/beta hydrolase;protein_id=UUE96773.1;transl_table=11 CP098602.1 Genbank gene 2783089 2784099 . - . ID=gene-NDY24_12335;Name=NDY24_12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12335 CP098602.1 Protein Homology CDS 2783089 2784099 . - 0 ID=cds-UUE96774.1;Parent=gene-NDY24_12335;Dbxref=NCBI_GP:UUE96774.1;Name=UUE96774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005989138.1;locus_tag=NDY24_12335;product=nuclease;protein_id=UUE96774.1;transl_table=11 CP098602.1 Genbank gene 2784201 2786687 . - . ID=gene-NDY24_12340;Name=NDY24_12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12340 CP098602.1 Protein Homology CDS 2784201 2786687 . - 0 ID=cds-UUE96775.1;Parent=gene-NDY24_12340;Dbxref=NCBI_GP:UUE96775.1;Name=UUE96775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005989141.1;locus_tag=NDY24_12340;product=TonB-dependent receptor;protein_id=UUE96775.1;transl_table=11 CP098602.1 Genbank pseudogene 2787244 2787552 . + . ID=gene-NDY24_12345;Name=NDY24_12345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_12345;pseudo=true CP098602.1 Protein Homology CDS 2787244 2787552 . + 0 ID=cds-NDY24_12345;Parent=gene-NDY24_12345;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036520.2;locus_tag=NDY24_12345;product=TetR/AcrR family transcriptional regulator;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2787769 2788650 . + . ID=gene-NDY24_12350;Name=NDY24_12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12350 CP098602.1 Protein Homology CDS 2787769 2788650 . + 0 ID=cds-UUF00389.1;Parent=gene-NDY24_12350;Dbxref=NCBI_GP:UUF00389.1;Name=UUF00389.1;Ontology_term=GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901465.1;locus_tag=NDY24_12350;product=NAD-dependent protein deacetylase;protein_id=UUF00389.1;transl_table=11 CP098602.1 Genbank gene 2788711 2789829 . + . ID=gene-NDY24_12355;Name=NDY24_12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12355 CP098602.1 Protein Homology CDS 2788711 2789829 . + 0 ID=cds-UUF00390.1;Parent=gene-NDY24_12355;Dbxref=NCBI_GP:UUF00390.1;Name=UUF00390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157627.1;locus_tag=NDY24_12355;product=NADH:flavin oxidoreductase/NADH oxidase;protein_id=UUF00390.1;transl_table=11 CP098602.1 Genbank gene 2789912 2790790 . + . ID=gene-NDY24_12360;Name=NDY24_12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12360 CP098602.1 Protein Homology CDS 2789912 2790790 . + 0 ID=cds-UUE96776.1;Parent=gene-NDY24_12360;Dbxref=NCBI_GP:UUE96776.1;Name=UUE96776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304345.1;locus_tag=NDY24_12360;product=NAD(P)-dependent oxidoreductase;protein_id=UUE96776.1;transl_table=11 CP098602.1 Genbank gene 2791004 2791396 . + . ID=gene-NDY24_12365;Name=NDY24_12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12365 CP098602.1 Protein Homology CDS 2791004 2791396 . + 0 ID=cds-UUE96777.1;Parent=gene-NDY24_12365;Dbxref=NCBI_GP:UUE96777.1;Name=UUE96777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304344.1;locus_tag=NDY24_12365;product=hypothetical protein;protein_id=UUE96777.1;transl_table=11 CP098602.1 Genbank pseudogene 2791465 2792310 . + . ID=gene-NDY24_12370;Name=purU;gbkey=Gene;gene=purU;gene_biotype=pseudogene;locus_tag=NDY24_12370;pseudo=true CP098602.1 Protein Homology CDS 2791465 2792310 . + 0 ID=cds-NDY24_12370;Parent=gene-NDY24_12370;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0009152,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237160.1;locus_tag=NDY24_12370;product=formyltetrahydrofolate deformylase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2792459 2793598 . + . ID=gene-NDY24_12375;Name=NDY24_12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12375 CP098602.1 Protein Homology CDS 2792459 2793598 . + 0 ID=cds-UUE96778.1;Parent=gene-NDY24_12375;Dbxref=NCBI_GP:UUE96778.1;Name=UUE96778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004147013.1;locus_tag=NDY24_12375;product=MFS transporter;protein_id=UUE96778.1;transl_table=11 CP098602.1 Genbank gene 2793684 2794385 . - . ID=gene-NDY24_12380;Name=NDY24_12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12380 CP098602.1 Protein Homology CDS 2793684 2794385 . - 0 ID=cds-UUE96779.1;Parent=gene-NDY24_12380;Dbxref=NCBI_GP:UUE96779.1;Name=UUE96779.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901480.1;locus_tag=NDY24_12380;product=response regulator;protein_id=UUE96779.1;transl_table=11 CP098602.1 Genbank gene 2794385 2795764 . - . ID=gene-NDY24_12385;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=NDY24_12385 CP098602.1 Protein Homology CDS 2794385 2795764 . - 0 ID=cds-UUE96780.1;Parent=gene-NDY24_12385;Dbxref=NCBI_GP:UUE96780.1;Name=UUE96780.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016021;gbkey=CDS;gene=baeS;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346030.1;locus_tag=NDY24_12385;product=sensor histidine kinase efflux regulator BaeS;protein_id=UUE96780.1;transl_table=11 CP098602.1 Genbank gene 2796015 2797292 . + . ID=gene-NDY24_12390;Name=NDY24_12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12390 CP098602.1 Protein Homology CDS 2796015 2797292 . + 0 ID=cds-UUE96781.1;Parent=gene-NDY24_12390;Dbxref=NCBI_GP:UUE96781.1;Name=UUE96781.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901482.1;locus_tag=NDY24_12390;product=efflux RND transporter periplasmic adaptor subunit;protein_id=UUE96781.1;transl_table=11 CP098602.1 Genbank pseudogene 2797302 2800450 . + . ID=gene-NDY24_12395;Name=NDY24_12395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_12395;pseudo=true CP098602.1 Protein Homology CDS 2797302 2800450 . + 0 ID=cds-NDY24_12395;Parent=gene-NDY24_12395;Note=frameshifted;Ontology_term=GO:0006810,GO:0015562,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015471616.1;locus_tag=NDY24_12395;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2800447 2801880 . + . ID=gene-NDY24_12400;Name=NDY24_12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12400 CP098602.1 Protein Homology CDS 2800447 2801880 . + 0 ID=cds-UUE96782.1;Parent=gene-NDY24_12400;Dbxref=NCBI_GP:UUE96782.1;Name=UUE96782.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901483.1;locus_tag=NDY24_12400;product=efflux transporter outer membrane subunit;protein_id=UUE96782.1;transl_table=11 CP098602.1 Genbank gene 2802553 2804511 . - . ID=gene-NDY24_12405;Name=NDY24_12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12405 CP098602.1 Protein Homology CDS 2802553 2804511 . - 0 ID=cds-UUE96783.1;Parent=gene-NDY24_12405;Dbxref=NCBI_GP:UUE96783.1;Name=UUE96783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915212.1;locus_tag=NDY24_12405;product=conditioned medium factor;protein_id=UUE96783.1;transl_table=11 CP098602.1 Genbank gene 2804821 2805720 . - . ID=gene-NDY24_12410;Name=NDY24_12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12410 CP098602.1 Protein Homology CDS 2804821 2805720 . - 0 ID=cds-UUE96784.1;Parent=gene-NDY24_12410;Dbxref=NCBI_GP:UUE96784.1;Name=UUE96784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157617.1;locus_tag=NDY24_12410;product=methylenetetrahydrofolate reductase;protein_id=UUE96784.1;transl_table=11 CP098602.1 Genbank gene 2805840 2806505 . - . ID=gene-NDY24_12415;Name=NDY24_12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12415 CP098602.1 Protein Homology CDS 2805840 2806505 . - 0 ID=cds-UUF00391.1;Parent=gene-NDY24_12415;Dbxref=NCBI_GP:UUF00391.1;Name=UUF00391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346036.1;locus_tag=NDY24_12415;product=epoxyqueuosine reductase QueH;protein_id=UUF00391.1;transl_table=11 CP098602.1 Genbank pseudogene 2806542 2807441 . - . ID=gene-NDY24_12420;Name=NDY24_12420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_12420;pseudo=true CP098602.1 Protein Homology CDS 2806542 2807441 . - 0 ID=cds-NDY24_12420;Parent=gene-NDY24_12420;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089083.1;locus_tag=NDY24_12420;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2807589 2808131 . + . ID=gene-NDY24_12425;Name=msuE;gbkey=Gene;gene=msuE;gene_biotype=protein_coding;locus_tag=NDY24_12425 CP098602.1 Protein Homology CDS 2807589 2808131 . + 0 ID=cds-UUE96785.1;Parent=gene-NDY24_12425;Dbxref=NCBI_GP:UUE96785.1;Name=UUE96785.1;Ontology_term=GO:0016491;gbkey=CDS;gene=msuE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019659752.1;locus_tag=NDY24_12425;product=FMN reductase;protein_id=UUE96785.1;transl_table=11 CP098602.1 Genbank gene 2808300 2809301 . + . ID=gene-NDY24_12430;Name=NDY24_12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12430 CP098602.1 Protein Homology CDS 2808300 2809301 . + 0 ID=cds-UUF00392.1;Parent=gene-NDY24_12430;Dbxref=NCBI_GP:UUF00392.1;Name=UUF00392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452644.1;locus_tag=NDY24_12430;product=DUF1852 domain-containing protein;protein_id=UUF00392.1;transl_table=11 CP098602.1 Genbank gene 2809330 2810361 . + . ID=gene-NDY24_12435;Name=NDY24_12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12435 CP098602.1 Protein Homology CDS 2809330 2810361 . + 0 ID=cds-UUE96786.1;Parent=gene-NDY24_12435;Dbxref=NCBI_GP:UUE96786.1;Name=UUE96786.1;Ontology_term=GO:0009086,GO:0003871;gbkey=CDS;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509336.1;locus_tag=NDY24_12435;product=methionine synthase;protein_id=UUE96786.1;transl_table=11 CP098602.1 Genbank gene 2810514 2811959 . - . ID=gene-NDY24_12440;Name=NDY24_12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12440 CP098602.1 Protein Homology CDS 2810514 2811959 . - 0 ID=cds-UUE96787.1;Parent=gene-NDY24_12440;Dbxref=NCBI_GP:UUE96787.1;Name=UUE96787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488991.1;locus_tag=NDY24_12440;product=OprO/OprP family phosphate-selective porin;protein_id=UUE96787.1;transl_table=11 CP098602.1 Genbank gene 2812570 2813460 . - . ID=gene-NDY24_12445;Name=NDY24_12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12445 CP098602.1 Protein Homology CDS 2812570 2813460 . - 0 ID=cds-UUE96788.1;Parent=gene-NDY24_12445;Dbxref=NCBI_GP:UUE96788.1;Name=UUE96788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452640.1;locus_tag=NDY24_12445;product=SDR family oxidoreductase;protein_id=UUE96788.1;transl_table=11 CP098602.1 Genbank gene 2813595 2814029 . + . ID=gene-NDY24_12450;Name=NDY24_12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12450 CP098602.1 Protein Homology CDS 2813595 2814029 . + 0 ID=cds-UUE96789.1;Parent=gene-NDY24_12450;Dbxref=NCBI_GP:UUE96789.1;Name=UUE96789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505072.1;locus_tag=NDY24_12450;product=helix-turn-helix transcriptional regulator;protein_id=UUE96789.1;transl_table=11 CP098602.1 Genbank gene 2814264 2815841 . - . ID=gene-NDY24_12455;Name=NDY24_12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12455 CP098602.1 Protein Homology CDS 2814264 2815841 . - 0 ID=cds-UUE96790.1;Parent=gene-NDY24_12455;Dbxref=NCBI_GP:UUE96790.1;Name=UUE96790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011103324.1;locus_tag=NDY24_12455;product=type III effector;protein_id=UUE96790.1;transl_table=11 CP098602.1 Genbank gene 2816940 2817245 . - . ID=gene-NDY24_12460;Name=NDY24_12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12460 CP098602.1 Protein Homology CDS 2816940 2817245 . - 0 ID=cds-UUE96791.1;Parent=gene-NDY24_12460;Dbxref=NCBI_GP:UUE96791.1;Name=UUE96791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300601.1;locus_tag=NDY24_12460;product=hypothetical protein;protein_id=UUE96791.1;transl_table=11 CP098602.1 Genbank gene 2817242 2817685 . - . ID=gene-NDY24_12465;Name=NDY24_12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12465 CP098602.1 Protein Homology CDS 2817242 2817685 . - 0 ID=cds-UUE96792.1;Parent=gene-NDY24_12465;Dbxref=NCBI_GP:UUE96792.1;Name=UUE96792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995372.1;locus_tag=NDY24_12465;product=DUF5329 domain-containing protein;protein_id=UUE96792.1;transl_table=11 CP098602.1 Genbank gene 2817785 2818576 . - . ID=gene-NDY24_12470;Name=NDY24_12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12470 CP098602.1 Protein Homology CDS 2817785 2818576 . - 0 ID=cds-UUE96793.1;Parent=gene-NDY24_12470;Dbxref=NCBI_GP:UUE96793.1;Name=UUE96793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995374.1;locus_tag=NDY24_12470;product=hypothetical protein;protein_id=UUE96793.1;transl_table=11 CP098602.1 Genbank pseudogene 2818977 2819784 . - . ID=gene-NDY24_12475;Name=NDY24_12475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_12475;pseudo=true CP098602.1 Protein Homology CDS 2818977 2819784 . - 0 ID=cds-NDY24_12475;Parent=gene-NDY24_12475;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002801519.1;locus_tag=NDY24_12475;product=IS5 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2819880 2820314 . - . ID=gene-NDY24_12480;Name=NDY24_12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12480 CP098602.1 GeneMarkS-2+ CDS 2819880 2820314 . - 0 ID=cds-UUE96794.1;Parent=gene-NDY24_12480;Dbxref=NCBI_GP:UUE96794.1;Name=UUE96794.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_12480;product=hypothetical protein;protein_id=UUE96794.1;transl_table=11 CP098602.1 Genbank gene 2820787 2821035 . - . ID=gene-NDY24_12485;Name=NDY24_12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12485 CP098602.1 Protein Homology CDS 2820787 2821035 . - 0 ID=cds-UUE96795.1;Parent=gene-NDY24_12485;Dbxref=NCBI_GP:UUE96795.1;Name=UUE96795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448538.1;locus_tag=NDY24_12485;product=hypothetical protein;protein_id=UUE96795.1;transl_table=11 CP098602.1 Genbank gene 2821137 2821487 . - . ID=gene-NDY24_12490;Name=NDY24_12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12490 CP098602.1 Protein Homology CDS 2821137 2821487 . - 0 ID=cds-UUE96796.1;Parent=gene-NDY24_12490;Dbxref=NCBI_GP:UUE96796.1;Name=UUE96796.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913224.1;locus_tag=NDY24_12490;product=SymE family type I addiction module toxin;protein_id=UUE96796.1;transl_table=11 CP098602.1 Genbank gene 2822004 2822669 . + . ID=gene-NDY24_12495;Name=NDY24_12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12495 CP098602.1 GeneMarkS-2+ CDS 2822004 2822669 . + 0 ID=cds-UUE96797.1;Parent=gene-NDY24_12495;Dbxref=NCBI_GP:UUE96797.1;Name=UUE96797.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_12495;product=hypothetical protein;protein_id=UUE96797.1;transl_table=11 CP098602.1 Genbank pseudogene 2823367 2824141 . + . ID=gene-NDY24_12500;Name=NDY24_12500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_12500;pseudo=true CP098602.1 Protein Homology CDS 2823367 2824141 . + 0 ID=cds-NDY24_12500;Parent=gene-NDY24_12500;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155024.1;locus_tag=NDY24_12500;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2824884 2825846 . + . ID=gene-NDY24_12505;Name=NDY24_12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12505 CP098602.1 Protein Homology CDS 2824884 2825846 . + 0 ID=cds-UUE96798.1;Parent=gene-NDY24_12505;Dbxref=NCBI_GP:UUE96798.1;Name=UUE96798.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037261.1;locus_tag=NDY24_12505;product=IS1595 family transposase;protein_id=UUE96798.1;transl_table=11 CP098602.1 Genbank gene 2825860 2826093 . - . ID=gene-NDY24_12510;Name=NDY24_12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12510 CP098602.1 GeneMarkS-2+ CDS 2825860 2826093 . - 0 ID=cds-UUE96799.1;Parent=gene-NDY24_12510;Dbxref=NCBI_GP:UUE96799.1;Name=UUE96799.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_12510;product=hypothetical protein;protein_id=UUE96799.1;transl_table=11 CP098602.1 Genbank gene 2826122 2826460 . - . ID=gene-NDY24_12515;Name=NDY24_12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12515 CP098602.1 Protein Homology CDS 2826122 2826460 . - 0 ID=cds-UUE96800.1;Parent=gene-NDY24_12515;Dbxref=NCBI_GP:UUE96800.1;Name=UUE96800.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: protein motif:HMM:NF014021.2;locus_tag=NDY24_12515;product=nucleotidyltransferase domain-containing protein;protein_id=UUE96800.1;transl_table=11 CP098602.1 Genbank gene 2826525 2827085 . - . ID=gene-NDY24_12520;Name=NDY24_12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12520 CP098602.1 GeneMarkS-2+ CDS 2826525 2827085 . - 0 ID=cds-UUE96801.1;Parent=gene-NDY24_12520;Dbxref=NCBI_GP:UUE96801.1;Name=UUE96801.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_12520;product=hypothetical protein;protein_id=UUE96801.1;transl_table=11 CP098602.1 Genbank gene 2827157 2827411 . - . ID=gene-NDY24_12525;Name=NDY24_12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12525 CP098602.1 GeneMarkS-2+ CDS 2827157 2827411 . - 0 ID=cds-UUE96802.1;Parent=gene-NDY24_12525;Dbxref=NCBI_GP:UUE96802.1;Name=UUE96802.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_12525;product=hypothetical protein;protein_id=UUE96802.1;transl_table=11 CP098602.1 Genbank gene 2827742 2828239 . - . ID=gene-NDY24_12530;Name=NDY24_12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12530 CP098602.1 GeneMarkS-2+ CDS 2827742 2828239 . - 0 ID=cds-UUE96803.1;Parent=gene-NDY24_12530;Dbxref=NCBI_GP:UUE96803.1;Name=UUE96803.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_12530;product=hypothetical protein;protein_id=UUE96803.1;transl_table=11 CP098602.1 Genbank gene 2828265 2829227 . - . ID=gene-NDY24_12535;Name=NDY24_12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12535 CP098602.1 Protein Homology CDS 2828265 2829227 . - 0 ID=cds-UUE96804.1;Parent=gene-NDY24_12535;Dbxref=NCBI_GP:UUE96804.1;Name=UUE96804.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037261.1;locus_tag=NDY24_12535;product=IS1595 family transposase;protein_id=UUE96804.1;transl_table=11 CP098602.1 Genbank gene 2830221 2830880 . - . ID=gene-NDY24_12540;Name=NDY24_12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12540 CP098602.1 GeneMarkS-2+ CDS 2830221 2830880 . - 0 ID=cds-UUE96805.1;Parent=gene-NDY24_12540;Dbxref=NCBI_GP:UUE96805.1;Name=UUE96805.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_12540;product=hypothetical protein;protein_id=UUE96805.1;transl_table=11 CP098602.1 Genbank gene 2831077 2832057 . + . ID=gene-NDY24_12545;Name=NDY24_12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12545 CP098602.1 Protein Homology CDS 2831077 2832057 . + 0 ID=cds-UUE96806.1;Parent=gene-NDY24_12545;Dbxref=NCBI_GP:UUE96806.1;Name=UUE96806.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=NDY24_12545;product=IS5 family transposase;protein_id=UUE96806.1;transl_table=11 CP098602.1 Genbank gene 2832240 2833220 . + . ID=gene-NDY24_12550;Name=NDY24_12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12550 CP098602.1 Protein Homology CDS 2832240 2833220 . + 0 ID=cds-UUE96807.1;Parent=gene-NDY24_12550;Dbxref=NCBI_GP:UUE96807.1;Name=UUE96807.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=NDY24_12550;product=IS5 family transposase;protein_id=UUE96807.1;transl_table=11 CP098602.1 Genbank gene 2833309 2833794 . - . ID=gene-NDY24_12555;Name=NDY24_12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12555 CP098602.1 Protein Homology CDS 2833309 2833794 . - 0 ID=cds-UUE96808.1;Parent=gene-NDY24_12555;Dbxref=NCBI_GP:UUE96808.1;Name=UUE96808.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022633.2;locus_tag=NDY24_12555;product=DUF2971 domain-containing protein;protein_id=UUE96808.1;transl_table=11 CP098602.1 Genbank gene 2833871 2835015 . + . ID=gene-NDY24_12560;Name=NDY24_12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12560 CP098602.1 Protein Homology CDS 2833871 2834114 . + 0 ID=cds-UUE96809.1;Parent=gene-NDY24_12560;Dbxref=NCBI_GP:UUE96809.1;Name=UUE96809.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=NDY24_12560;product=IS3 family transposase;protein_id=UUE96809.1;transl_table=11 CP098602.1 Protein Homology CDS 2834114 2835015 . + 2 ID=cds-UUE96809.1;Parent=gene-NDY24_12560;Dbxref=NCBI_GP:UUE96809.1;Name=UUE96809.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=NDY24_12560;product=IS3 family transposase;protein_id=UUE96809.1;transl_table=11 CP098602.1 Genbank gene 2835020 2835388 . - . ID=gene-NDY24_12565;Name=NDY24_12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12565 CP098602.1 GeneMarkS-2+ CDS 2835020 2835388 . - 0 ID=cds-UUE96810.1;Parent=gene-NDY24_12565;Dbxref=NCBI_GP:UUE96810.1;Name=UUE96810.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_12565;product=hypothetical protein;protein_id=UUE96810.1;transl_table=11 CP098602.1 Genbank gene 2835460 2835945 . - . ID=gene-NDY24_12570;Name=NDY24_12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12570 CP098602.1 Protein Homology CDS 2835460 2835945 . - 0 ID=cds-UUE96811.1;Parent=gene-NDY24_12570;Dbxref=NCBI_GP:UUE96811.1;Name=UUE96811.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018684.2;locus_tag=NDY24_12570;product=DUF1311 domain-containing protein;protein_id=UUE96811.1;transl_table=11 CP098602.1 Genbank pseudogene 2836263 2836590 . + . ID=gene-NDY24_12575;Name=NDY24_12575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_12575;pseudo=true CP098602.1 Protein Homology CDS 2836263 2836590 . + 0 ID=cds-NDY24_12575;Parent=gene-NDY24_12575;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113547.1;locus_tag=NDY24_12575;product=phage integrase N-terminal SAM-like domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2836620 2838458 . - . ID=gene-NDY24_12580;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=NDY24_12580 CP098602.1 Protein Homology CDS 2836620 2838458 . - 0 ID=cds-UUE96812.1;Parent=gene-NDY24_12580;Dbxref=NCBI_GP:UUE96812.1;Name=UUE96812.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437115.1;locus_tag=NDY24_12580;product=dihydroxy-acid dehydratase;protein_id=UUE96812.1;transl_table=11 CP098602.1 Genbank gene 2838753 2839019 . + . ID=gene-NDY24_12585;Name=NDY24_12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12585 CP098602.1 Protein Homology CDS 2838753 2839019 . + 0 ID=cds-UUE96813.1;Parent=gene-NDY24_12585;Dbxref=NCBI_GP:UUE96813.1;Name=UUE96813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409612.1;locus_tag=NDY24_12585;product=YkgJ family cysteine cluster protein;protein_id=UUE96813.1;transl_table=11 CP098602.1 Genbank gene 2839066 2839611 . - . ID=gene-NDY24_12590;Name=NDY24_12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12590 CP098602.1 Protein Homology CDS 2839066 2839611 . - 0 ID=cds-UUE96814.1;Parent=gene-NDY24_12590;Dbxref=NCBI_GP:UUE96814.1;Name=UUE96814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451706.1;locus_tag=NDY24_12590;product=gamma carbonic anhydrase family protein;protein_id=UUE96814.1;transl_table=11 CP098602.1 Genbank gene 2840124 2841434 . + . ID=gene-NDY24_12595;Name=NDY24_12595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12595 CP098602.1 Protein Homology CDS 2840124 2841434 . + 0 ID=cds-UUE96815.1;Parent=gene-NDY24_12595;Dbxref=NCBI_GP:UUE96815.1;Name=UUE96815.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010341886.1;locus_tag=NDY24_12595;product=MFS transporter;protein_id=UUE96815.1;transl_table=11 CP098602.1 Genbank gene 2841573 2842817 . + . ID=gene-NDY24_12600;Name=NDY24_12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12600 CP098602.1 Protein Homology CDS 2841573 2842817 . + 0 ID=cds-UUF00393.1;Parent=gene-NDY24_12600;Dbxref=NCBI_GP:UUF00393.1;Name=UUF00393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172339.1;locus_tag=NDY24_12600;product=HD-GYP domain-containing protein;protein_id=UUF00393.1;transl_table=11 CP098602.1 Genbank gene 2843187 2843663 . + . ID=gene-NDY24_12605;Name=NDY24_12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12605 CP098602.1 Protein Homology CDS 2843187 2843663 . + 0 ID=cds-UUE96816.1;Parent=gene-NDY24_12605;Dbxref=NCBI_GP:UUE96816.1;Name=UUE96816.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409608.1;locus_tag=NDY24_12605;product=MarR family transcriptional regulator;protein_id=UUE96816.1;transl_table=11 CP098602.1 Genbank gene 2843883 2844821 . + . ID=gene-NDY24_12610;Name=NDY24_12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12610 CP098602.1 Protein Homology CDS 2843883 2844821 . + 0 ID=cds-UUF00394.1;Parent=gene-NDY24_12610;Dbxref=NCBI_GP:UUF00394.1;Name=UUF00394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010343728.1;locus_tag=NDY24_12610;product=transporter;protein_id=UUF00394.1;transl_table=11 CP098602.1 Genbank gene 2844855 2845622 . + . ID=gene-NDY24_12615;Name=NDY24_12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12615 CP098602.1 Protein Homology CDS 2844855 2845622 . + 0 ID=cds-UUE96817.1;Parent=gene-NDY24_12615;Dbxref=NCBI_GP:UUE96817.1;Name=UUE96817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903483.1;locus_tag=NDY24_12615;product=coniferyl-alcohol dehydrogenase;protein_id=UUE96817.1;transl_table=11 CP098602.1 Genbank gene 2845650 2847131 . + . ID=gene-NDY24_12620;Name=NDY24_12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12620 CP098602.1 Protein Homology CDS 2845650 2847131 . + 0 ID=cds-UUE96818.1;Parent=gene-NDY24_12620;Dbxref=NCBI_GP:UUE96818.1;Name=UUE96818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158875.1;locus_tag=NDY24_12620;product=benzaldehyde dehydrogenase;protein_id=UUE96818.1;transl_table=11 CP098602.1 Genbank gene 2847764 2848660 . - . ID=gene-NDY24_12625;Name=NDY24_12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12625 CP098602.1 Protein Homology CDS 2847764 2848660 . - 0 ID=cds-UUE96819.1;Parent=gene-NDY24_12625;Dbxref=NCBI_GP:UUE96819.1;Name=UUE96819.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485653.1;locus_tag=NDY24_12625;product=helix-turn-helix domain-containing protein;protein_id=UUE96819.1;transl_table=11 CP098602.1 Genbank gene 2848759 2849946 . + . ID=gene-NDY24_12630;Name=pobA;gbkey=Gene;gene=pobA;gene_biotype=protein_coding;locus_tag=NDY24_12630 CP098602.1 Protein Homology CDS 2848759 2849946 . + 0 ID=cds-UUE96820.1;Parent=gene-NDY24_12630;Dbxref=NCBI_GP:UUE96820.1;Name=UUE96820.1;Ontology_term=GO:0018874,GO:0018659;gbkey=CDS;gene=pobA;go_function=4-hydroxybenzoate 3-monooxygenase activity|0018659||IEA;go_process=benzoate metabolic process|0018874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449585.1;locus_tag=NDY24_12630;product=4-hydroxybenzoate 3-monooxygenase;protein_id=UUE96820.1;transl_table=11 CP098602.1 Genbank gene 2850321 2850833 . + . ID=gene-NDY24_12635;Name=NDY24_12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12635 CP098602.1 Protein Homology CDS 2850321 2850833 . + 0 ID=cds-UUE96821.1;Parent=gene-NDY24_12635;Dbxref=NCBI_GP:UUE96821.1;Name=UUE96821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300587.1;locus_tag=NDY24_12635;product=nuclear transport factor 2 family protein;protein_id=UUE96821.1;transl_table=11 CP098602.1 Genbank gene 2850949 2852448 . - . ID=gene-NDY24_12640;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=NDY24_12640 CP098602.1 Protein Homology CDS 2850949 2852448 . - 0 ID=cds-UUE96822.1;Parent=gene-NDY24_12640;Dbxref=NCBI_GP:UUE96822.1;Name=UUE96822.1;Ontology_term=GO:0006071,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368988.1;locus_tag=NDY24_12640;product=glycerol kinase GlpK;protein_id=UUE96822.1;transl_table=11 CP098602.1 Genbank gene 2852583 2853404 . - . ID=gene-NDY24_12645;Name=NDY24_12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12645 CP098602.1 Protein Homology CDS 2852583 2853404 . - 0 ID=cds-UUE96823.1;Parent=gene-NDY24_12645;Dbxref=NCBI_GP:UUE96823.1;Name=UUE96823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449582.1;locus_tag=NDY24_12645;product=aquaporin family protein;protein_id=UUE96823.1;transl_table=11 CP098602.1 Genbank gene 2853601 2855115 . - . ID=gene-NDY24_12650;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=NDY24_12650 CP098602.1 Protein Homology CDS 2853601 2855115 . - 0 ID=cds-UUE96824.1;Parent=gene-NDY24_12650;Dbxref=NCBI_GP:UUE96824.1;Name=UUE96824.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920025.1;locus_tag=NDY24_12650;product=glycerol-3-phosphate dehydrogenase;protein_id=UUE96824.1;transl_table=11 CP098602.1 Genbank gene 2855342 2856169 . - . ID=gene-NDY24_12655;Name=NDY24_12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12655 CP098602.1 Protein Homology CDS 2855342 2856169 . - 0 ID=cds-UUE96825.1;Parent=gene-NDY24_12655;Dbxref=NCBI_GP:UUE96825.1;Name=UUE96825.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449033.1;locus_tag=NDY24_12655;product=DeoR family transcriptional regulator;protein_id=UUE96825.1;transl_table=11 CP098602.1 Genbank gene 2856181 2856270 . - . ID=gene-NDY24_12660;Name=NDY24_12660;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_12660 CP098602.1 cmsearch ncRNA 2856181 2856270 . - . ID=rna-NDY24_12660;Parent=gene-NDY24_12660;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_12660;product=sX9 sRNA CP098602.1 cmsearch exon 2856181 2856270 . - . ID=exon-NDY24_12660-1;Parent=rna-NDY24_12660;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_12660;product=sX9 sRNA CP098602.1 Genbank gene 2856330 2857313 . - . ID=gene-NDY24_12665;Name=NDY24_12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12665 CP098602.1 Protein Homology CDS 2856330 2857313 . - 0 ID=cds-UUE96826.1;Parent=gene-NDY24_12665;Dbxref=NCBI_GP:UUE96826.1;Name=UUE96826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158877.1;locus_tag=NDY24_12665;product=PDR/VanB family oxidoreductase;protein_id=UUE96826.1;transl_table=11 CP098602.1 Genbank gene 2857306 2858109 . - . ID=gene-NDY24_12670;Name=NDY24_12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12670 CP098602.1 Protein Homology CDS 2857306 2858109 . - 0 ID=cds-UUE96827.1;Parent=gene-NDY24_12670;Dbxref=NCBI_GP:UUE96827.1;Name=UUE96827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904720.1;locus_tag=NDY24_12670;product=GntR family transcriptional regulator;protein_id=UUE96827.1;transl_table=11 CP098602.1 Genbank gene 2858131 2859207 . - . ID=gene-NDY24_12675;Name=NDY24_12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12675 CP098602.1 Protein Homology CDS 2858131 2859207 . - 0 ID=cds-UUE96828.1;Parent=gene-NDY24_12675;Dbxref=NCBI_GP:UUE96828.1;Name=UUE96828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302967.1;locus_tag=NDY24_12675;product=aromatic ring-hydroxylating dioxygenase subunit alpha;protein_id=UUE96828.1;transl_table=11 CP098602.1 Genbank gene 2859464 2860327 . + . ID=gene-NDY24_12680;Name=NDY24_12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12680 CP098602.1 Protein Homology CDS 2859464 2860327 . + 0 ID=cds-UUE96829.1;Parent=gene-NDY24_12680;Dbxref=NCBI_GP:UUE96829.1;Name=UUE96829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089107.1;locus_tag=NDY24_12680;product=CoA transferase subunit A;protein_id=UUE96829.1;transl_table=11 CP098602.1 Genbank gene 2860324 2861112 . + . ID=gene-NDY24_12685;Name=NDY24_12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12685 CP098602.1 Protein Homology CDS 2860324 2861112 . + 0 ID=cds-UUE96830.1;Parent=gene-NDY24_12685;Dbxref=NCBI_GP:UUE96830.1;Name=UUE96830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089108.1;locus_tag=NDY24_12685;product=CoA-transferase subunit beta;protein_id=UUE96830.1;transl_table=11 CP098602.1 Genbank gene 2861109 2862317 . + . ID=gene-NDY24_12690;Name=pcaF;gbkey=Gene;gene=pcaF;gene_biotype=protein_coding;locus_tag=NDY24_12690 CP098602.1 Protein Homology CDS 2861109 2862317 . + 0 ID=cds-UUE96831.1;Parent=gene-NDY24_12690;Dbxref=NCBI_GP:UUE96831.1;Name=UUE96831.1;Ontology_term=GO:0019619,GO:0016747;gbkey=CDS;gene=pcaF;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008577959.1;locus_tag=NDY24_12690;product=3-oxoadipyl-CoA thiolase;protein_id=UUE96831.1;transl_table=11 CP098602.1 Genbank gene 2862432 2863160 . + . ID=gene-NDY24_12695;Name=pcaH;gbkey=Gene;gene=pcaH;gene_biotype=protein_coding;locus_tag=NDY24_12695 CP098602.1 Protein Homology CDS 2862432 2863160 . + 0 ID=cds-UUE96832.1;Parent=gene-NDY24_12695;Dbxref=NCBI_GP:UUE96832.1;Name=UUE96832.1;Ontology_term=GO:0046278,GO:0018578;gbkey=CDS;gene=pcaH;go_function=protocatechuate 3%2C4-dioxygenase activity|0018578||IEA;go_process=3%2C4-dihydroxybenzoate metabolic process|0046278||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118364.1;locus_tag=NDY24_12695;product=protocatechuate 3%2C4-dioxygenase subunit beta;protein_id=UUE96832.1;transl_table=11 CP098602.1 Genbank gene 2863165 2863728 . + . ID=gene-NDY24_12700;Name=pcaG;gbkey=Gene;gene=pcaG;gene_biotype=protein_coding;locus_tag=NDY24_12700 CP098602.1 Protein Homology CDS 2863165 2863728 . + 0 ID=cds-UUE96833.1;Parent=gene-NDY24_12700;Dbxref=NCBI_GP:UUE96833.1;Name=UUE96833.1;Ontology_term=GO:0046278,GO:0018578;gbkey=CDS;gene=pcaG;go_function=protocatechuate 3%2C4-dioxygenase activity|0018578||IEA;go_process=3%2C4-dihydroxybenzoate metabolic process|0046278||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912759.1;locus_tag=NDY24_12700;product=protocatechuate 3%2C4-dioxygenase subunit alpha;protein_id=UUE96833.1;transl_table=11 CP098602.1 Genbank pseudogene 2863816 2865192 . + . ID=gene-NDY24_12705;Name=NDY24_12705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_12705;pseudo=true CP098602.1 Protein Homology CDS 2863816 2865192 . + 0 ID=cds-NDY24_12705;Parent=gene-NDY24_12705;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0019619,GO:0047472;gbkey=CDS;go_function=3-carboxy-cis%2Ccis-muconate cycloisomerase activity|0047472||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156473.1;locus_tag=NDY24_12705;product=3-carboxy-cis%2Ccis-muconate cycloisomerase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2865210 2865992 . + . ID=gene-NDY24_12710;Name=pcaD;gbkey=Gene;gene=pcaD;gene_biotype=protein_coding;locus_tag=NDY24_12710 CP098602.1 Protein Homology CDS 2865210 2865992 . + 0 ID=cds-UUE96834.1;Parent=gene-NDY24_12710;Dbxref=NCBI_GP:UUE96834.1;Name=UUE96834.1;Ontology_term=GO:0042952,GO:0047570;gbkey=CDS;gene=pcaD;go_function=3-oxoadipate enol-lactonase activity|0047570||IEA;go_process=beta-ketoadipate pathway|0042952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118367.1;locus_tag=NDY24_12710;product=3-oxoadipate enol-lactonase;protein_id=UUE96834.1;transl_table=11 CP098602.1 Genbank gene 2866057 2866443 . + . ID=gene-NDY24_12715;Name=pcaC;gbkey=Gene;gene=pcaC;gene_biotype=protein_coding;locus_tag=NDY24_12715 CP098602.1 Protein Homology CDS 2866057 2866443 . + 0 ID=cds-UUE96835.1;Parent=gene-NDY24_12715;Dbxref=NCBI_GP:UUE96835.1;Name=UUE96835.1;Ontology_term=GO:0047575;gbkey=CDS;gene=pcaC;go_function=4-carboxymuconolactone decarboxylase activity|0047575||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449044.1;locus_tag=NDY24_12715;product=4-carboxymuconolactone decarboxylase;protein_id=UUE96835.1;transl_table=11 CP098602.1 Genbank gene 2866701 2867627 . + . ID=gene-NDY24_12720;Name=NDY24_12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12720 CP098602.1 Protein Homology CDS 2866701 2867627 . + 0 ID=cds-UUE96836.1;Parent=gene-NDY24_12720;Dbxref=NCBI_GP:UUE96836.1;Name=UUE96836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015462787.1;locus_tag=NDY24_12720;product=lysophospholipase;protein_id=UUE96836.1;transl_table=11 CP098602.1 Genbank gene 2867644 2868504 . - . ID=gene-NDY24_12725;Name=NDY24_12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12725 CP098602.1 Protein Homology CDS 2867644 2868504 . - 0 ID=cds-UUE96837.1;Parent=gene-NDY24_12725;Dbxref=NCBI_GP:UUE96837.1;Name=UUE96837.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368966.1;locus_tag=NDY24_12725;product=helix-turn-helix domain-containing protein;protein_id=UUE96837.1;transl_table=11 CP098602.1 Genbank gene 2868652 2869512 . + . ID=gene-NDY24_12730;Name=NDY24_12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12730 CP098602.1 Protein Homology CDS 2868652 2869512 . + 0 ID=cds-UUE96838.1;Parent=gene-NDY24_12730;Dbxref=NCBI_GP:UUE96838.1;Name=UUE96838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968468.1;locus_tag=NDY24_12730;product=serine protein kinase RIO;protein_id=UUE96838.1;transl_table=11 CP098602.1 Genbank gene 2869856 2870599 . + . ID=gene-NDY24_12735;Name=NDY24_12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12735 CP098602.1 Protein Homology CDS 2869856 2870599 . + 0 ID=cds-UUE96839.1;Parent=gene-NDY24_12735;Dbxref=NCBI_GP:UUE96839.1;Name=UUE96839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451962.1;locus_tag=NDY24_12735;product=alpha/beta hydrolase;protein_id=UUE96839.1;transl_table=11 CP098602.1 Genbank gene 2870596 2871306 . - . ID=gene-NDY24_12740;Name=NDY24_12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12740 CP098602.1 Protein Homology CDS 2870596 2871306 . - 0 ID=cds-UUE96840.1;Parent=gene-NDY24_12740;Dbxref=NCBI_GP:UUE96840.1;Name=UUE96840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912749.1;locus_tag=NDY24_12740;product=DUF2490 domain-containing protein;protein_id=UUE96840.1;transl_table=11 CP098602.1 Genbank gene 2871750 2873654 . - . ID=gene-NDY24_12745;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=NDY24_12745 CP098602.1 Protein Homology CDS 2871750 2873654 . - 0 ID=cds-UUE96841.1;Parent=gene-NDY24_12745;Dbxref=NCBI_GP:UUE96841.1;Name=UUE96841.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437137.1;locus_tag=NDY24_12745;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=UUE96841.1;transl_table=11 CP098602.1 Genbank gene 2874236 2874718 . - . ID=gene-NDY24_12750;Name=NDY24_12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12750 CP098602.1 Protein Homology CDS 2874236 2874718 . - 0 ID=cds-UUE96842.1;Parent=gene-NDY24_12750;Dbxref=NCBI_GP:UUE96842.1;Name=UUE96842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171656.1;locus_tag=NDY24_12750;product=hypothetical protein;protein_id=UUE96842.1;transl_table=11 CP098602.1 Genbank gene 2874875 2875834 . + . ID=gene-NDY24_12755;Name=NDY24_12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12755 CP098602.1 Protein Homology CDS 2874875 2875834 . + 0 ID=cds-UUE96843.1;Parent=gene-NDY24_12755;Dbxref=NCBI_GP:UUE96843.1;Name=UUE96843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920032.1;locus_tag=NDY24_12755;product=pyridoxal-phosphate dependent enzyme;protein_id=UUE96843.1;transl_table=11 CP098602.1 Genbank gene 2875819 2876436 . + . ID=gene-NDY24_12760;Name=NDY24_12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12760 CP098602.1 Protein Homology CDS 2875819 2876436 . + 0 ID=cds-UUE96844.1;Parent=gene-NDY24_12760;Dbxref=NCBI_GP:UUE96844.1;Name=UUE96844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451966.1;locus_tag=NDY24_12760;product=YdcF family protein;protein_id=UUE96844.1;transl_table=11 CP098602.1 Genbank gene 2876516 2876935 . + . ID=gene-NDY24_12765;Name=NDY24_12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12765 CP098602.1 Protein Homology CDS 2876516 2876935 . + 0 ID=cds-UUE96845.1;Parent=gene-NDY24_12765;Dbxref=NCBI_GP:UUE96845.1;Name=UUE96845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903249.1;locus_tag=NDY24_12765;product=nuclear transport factor 2 family protein;protein_id=UUE96845.1;transl_table=11 CP098602.1 Genbank gene 2877154 2878059 . - . ID=gene-NDY24_12770;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=NDY24_12770 CP098602.1 Protein Homology CDS 2877154 2878059 . - 0 ID=cds-UUE96846.1;Parent=gene-NDY24_12770;Dbxref=NCBI_GP:UUE96846.1;Name=UUE96846.1;Ontology_term=GO:0018193;gbkey=CDS;gene=lpxO;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443706.1;locus_tag=NDY24_12770;product=lipid A hydroxylase LpxO;protein_id=UUE96846.1;transl_table=11 CP098602.1 Genbank gene 2878155 2878232 . + . ID=gene-NDY24_12775;Name=NDY24_12775;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_12775 CP098602.1 cmsearch ncRNA 2878155 2878232 . + . ID=rna-NDY24_12775;Parent=gene-NDY24_12775;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_12775;product=sX9 sRNA CP098602.1 cmsearch exon 2878155 2878232 . + . ID=exon-NDY24_12775-1;Parent=rna-NDY24_12775;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_12775;product=sX9 sRNA CP098602.1 Genbank gene 2878404 2879288 . - . ID=gene-NDY24_12780;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=NDY24_12780 CP098602.1 Protein Homology CDS 2878404 2879288 . - 0 ID=cds-UUE96847.1;Parent=gene-NDY24_12780;Dbxref=NCBI_GP:UUE96847.1;Name=UUE96847.1;Ontology_term=GO:0009102,GO:0008171;gbkey=CDS;gene=bioC;go_function=O-methyltransferase activity|0008171||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485708.1;locus_tag=NDY24_12780;product=malonyl-ACP O-methyltransferase BioC;protein_id=UUE96847.1;transl_table=11 CP098602.1 Genbank gene 2879502 2880284 . - . ID=gene-NDY24_12785;Name=NDY24_12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12785 CP098602.1 Protein Homology CDS 2879502 2880284 . - 0 ID=cds-UUE96848.1;Parent=gene-NDY24_12785;Dbxref=NCBI_GP:UUE96848.1;Name=UUE96848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509285.1;locus_tag=NDY24_12785;product=SDR family oxidoreductase;protein_id=UUE96848.1;transl_table=11 CP098602.1 Genbank gene 2880329 2881090 . - . ID=gene-NDY24_12790;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=NDY24_12790 CP098602.1 Protein Homology CDS 2880329 2881090 . - 0 ID=cds-UUE96849.1;Parent=gene-NDY24_12790;Dbxref=NCBI_GP:UUE96849.1;Name=UUE96849.1;Ontology_term=GO:0009102,GO:0003824;gbkey=CDS;gene=bioH;go_function=catalytic activity|0003824||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968482.1;locus_tag=NDY24_12790;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=UUE96849.1;transl_table=11 CP098602.1 Genbank gene 2881383 2882588 . - . ID=gene-NDY24_12795;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=NDY24_12795 CP098602.1 Protein Homology CDS 2881383 2882588 . - 0 ID=cds-UUE96850.1;Parent=gene-NDY24_12795;Dbxref=NCBI_GP:UUE96850.1;Name=UUE96850.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903255.1;locus_tag=NDY24_12795;product=8-amino-7-oxononanoate synthase;protein_id=UUE96850.1;transl_table=11 CP098602.1 Genbank gene 2882687 2883721 . - . ID=gene-NDY24_12800;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=NDY24_12800 CP098602.1 Protein Homology CDS 2882687 2883721 . - 0 ID=cds-UUE96851.1;Parent=gene-NDY24_12800;Dbxref=NCBI_GP:UUE96851.1;Name=UUE96851.1;Ontology_term=GO:0009102,GO:0004076,GO:0051537,GO:0051539,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368929.1;locus_tag=NDY24_12800;product=biotin synthase BioB;protein_id=UUE96851.1;transl_table=11 CP098602.1 Genbank gene 2883771 2884496 . + . ID=gene-NDY24_12805;Name=NDY24_12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12805 CP098602.1 Protein Homology CDS 2883771 2884496 . + 0 ID=cds-UUE96852.1;Parent=gene-NDY24_12805;Dbxref=NCBI_GP:UUE96852.1;Name=UUE96852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115760.1;locus_tag=NDY24_12805;product=ComF family protein;protein_id=UUE96852.1;transl_table=11 CP098602.1 Genbank gene 2884888 2885793 . - . ID=gene-NDY24_12810;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=NDY24_12810 CP098602.1 Protein Homology CDS 2884888 2885793 . - 0 ID=cds-UUE96853.1;Parent=gene-NDY24_12810;Dbxref=NCBI_GP:UUE96853.1;Name=UUE96853.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate octaprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050286.1;locus_tag=NDY24_12810;product=4-hydroxybenzoate octaprenyltransferase;protein_id=UUE96853.1;transl_table=11 CP098602.1 Genbank gene 2886021 2886097 . + . ID=gene-NDY24_12815;Name=NDY24_12815;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_12815 CP098602.1 tRNAscan-SE tRNA 2886021 2886097 . + . ID=rna-NDY24_12815;Parent=gene-NDY24_12815;anticodon=(pos:2886055..2886057);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_12815;product=tRNA-Arg CP098602.1 tRNAscan-SE exon 2886021 2886097 . + . ID=exon-NDY24_12815-1;Parent=rna-NDY24_12815;anticodon=(pos:2886055..2886057);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_12815;product=tRNA-Arg CP098602.1 Genbank pseudogene 2886333 2886461 . + . ID=gene-NDY24_12820;Name=NDY24_12820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_12820;pseudo=true CP098602.1 Protein Homology CDS 2886333 2886461 . + 0 ID=cds-NDY24_12820;Parent=gene-NDY24_12820;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005991142.1;locus_tag=NDY24_12820;product=DNA repair protein RadC;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2886645 2887328 . + . ID=gene-NDY24_12825;Name=NDY24_12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12825 CP098602.1 Protein Homology CDS 2886645 2887328 . + 0 ID=cds-UUF00395.1;Parent=gene-NDY24_12825;Dbxref=NCBI_GP:UUF00395.1;Name=UUF00395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451223.1;locus_tag=NDY24_12825;product=thermonuclease family protein;protein_id=UUF00395.1;transl_table=11 CP098602.1 Genbank gene 2887541 2887882 . - . ID=gene-NDY24_12830;Name=NDY24_12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12830 CP098602.1 Protein Homology CDS 2887541 2887882 . - 0 ID=cds-UUE96854.1;Parent=gene-NDY24_12830;Dbxref=NCBI_GP:UUE96854.1;Name=UUE96854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974834.1;locus_tag=NDY24_12830;product=HPF/RaiA family ribosome-associated protein;protein_id=UUE96854.1;transl_table=11 CP098602.1 Genbank gene 2888237 2890660 . + . ID=gene-NDY24_12835;Name=NDY24_12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12835 CP098602.1 Protein Homology CDS 2888237 2890660 . + 0 ID=cds-UUF00396.1;Parent=gene-NDY24_12835;Dbxref=NCBI_GP:UUF00396.1;Name=UUF00396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112899.1;locus_tag=NDY24_12835;product=DUF3772 domain-containing protein;protein_id=UUF00396.1;transl_table=11 CP098602.1 Genbank gene 2891304 2891381 . - . ID=gene-NDY24_12840;Name=NDY24_12840;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_12840 CP098602.1 cmsearch ncRNA 2891304 2891381 . - . ID=rna-NDY24_12840;Parent=gene-NDY24_12840;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_12840;product=sX9 sRNA CP098602.1 cmsearch exon 2891304 2891381 . - . ID=exon-NDY24_12840-1;Parent=rna-NDY24_12840;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_12840;product=sX9 sRNA CP098602.1 Genbank gene 2891460 2893568 . - . ID=gene-NDY24_12845;Name=NDY24_12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12845 CP098602.1 Protein Homology CDS 2891460 2893568 . - 0 ID=cds-UUE96855.1;Parent=gene-NDY24_12845;Dbxref=NCBI_GP:UUE96855.1;Name=UUE96855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171651.1;locus_tag=NDY24_12845;product=phosphoglycerol transferase I;protein_id=UUE96855.1;transl_table=11 CP098602.1 Genbank gene 2893942 2895666 . - . ID=gene-NDY24_12850;Name=NDY24_12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12850 CP098602.1 Protein Homology CDS 2893942 2895666 . - 0 ID=cds-UUE96856.1;Parent=gene-NDY24_12850;Dbxref=NCBI_GP:UUE96856.1;Name=UUE96856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301292.1;locus_tag=NDY24_12850;product=AarF/UbiB family protein;protein_id=UUE96856.1;transl_table=11 CP098602.1 Genbank gene 2895796 2896737 . + . ID=gene-NDY24_12855;Name=NDY24_12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12855 CP098602.1 Protein Homology CDS 2895796 2896737 . + 0 ID=cds-UUE96857.1;Parent=gene-NDY24_12855;Dbxref=NCBI_GP:UUE96857.1;Name=UUE96857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005928381.1;locus_tag=NDY24_12855;product=DUF808 domain-containing protein;protein_id=UUE96857.1;transl_table=11 CP098602.1 Genbank gene 2897164 2898468 . + . ID=gene-NDY24_12860;Name=NDY24_12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12860 CP098602.1 Protein Homology CDS 2897164 2898468 . + 0 ID=cds-UUF00397.1;Parent=gene-NDY24_12860;Dbxref=NCBI_GP:UUF00397.1;Name=UUF00397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449761.1;locus_tag=NDY24_12860;product=family 10 glycosylhydrolase;protein_id=UUF00397.1;transl_table=11 CP098602.1 Genbank pseudogene 2898580 2900198 . - . ID=gene-NDY24_12865;Name=NDY24_12865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_12865;pseudo=true CP098602.1 Protein Homology CDS 2898580 2900198 . - 0 ID=cds-NDY24_12865;Parent=gene-NDY24_12865;Note=frameshifted;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089156.1;locus_tag=NDY24_12865;product=diguanylate cyclase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2900682 2902265 . + . ID=gene-NDY24_12870;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=NDY24_12870 CP098602.1 Protein Homology CDS 2900682 2902265 . + 0 ID=cds-UUE96858.1;Parent=gene-NDY24_12870;Dbxref=NCBI_GP:UUE96858.1;Name=UUE96858.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=glycogen (starch) synthase activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575489.1;locus_tag=NDY24_12870;product=glycogen synthase GlgA;protein_id=UUE96858.1;transl_table=11 CP098602.1 Genbank gene 2902262 2904493 . + . ID=gene-NDY24_12875;Name=NDY24_12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12875 CP098602.1 Protein Homology CDS 2902262 2904493 . + 0 ID=cds-UUE96859.1;Parent=gene-NDY24_12875;Dbxref=NCBI_GP:UUE96859.1;Name=UUE96859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161584.1;locus_tag=NDY24_12875;product=1%2C4-alpha-glucan branching enzyme;protein_id=UUE96859.1;transl_table=11 CP098602.1 Genbank gene 2904496 2906253 . + . ID=gene-NDY24_12880;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=NDY24_12880 CP098602.1 Protein Homology CDS 2904496 2906253 . + 0 ID=cds-UUE96860.1;Parent=gene-NDY24_12880;Dbxref=NCBI_GP:UUE96860.1;Name=UUE96860.1;Ontology_term=GO:0005992,GO:0016798;gbkey=CDS;gene=treZ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156528.1;locus_tag=NDY24_12880;product=malto-oligosyltrehalose trehalohydrolase;protein_id=UUE96860.1;transl_table=11 CP098602.1 Genbank gene 2906250 2908199 . + . ID=gene-NDY24_12885;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=NDY24_12885 CP098602.1 Protein Homology CDS 2906250 2908199 . + 0 ID=cds-UUE96861.1;Parent=gene-NDY24_12885;Dbxref=NCBI_GP:UUE96861.1;Name=UUE96861.1;Ontology_term=GO:0005980,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449756.1;locus_tag=NDY24_12885;product=4-alpha-glucanotransferase;protein_id=UUE96861.1;transl_table=11 CP098602.1 Genbank gene 2908196 2910799 . + . ID=gene-NDY24_12890;Name=treY;gbkey=Gene;gene=treY;gene_biotype=protein_coding;locus_tag=NDY24_12890 CP098602.1 Protein Homology CDS 2908196 2910799 . + 0 ID=cds-UUE96862.1;Parent=gene-NDY24_12890;Dbxref=NCBI_GP:UUE96862.1;Name=UUE96862.1;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449755.1;locus_tag=NDY24_12890;product=malto-oligosyltrehalose synthase;protein_id=UUE96862.1;transl_table=11 CP098602.1 Genbank gene 2910813 2910986 . + . ID=gene-NDY24_12895;Name=NDY24_12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12895 CP098602.1 Protein Homology CDS 2910813 2910986 . + 0 ID=cds-UUE96863.1;Parent=gene-NDY24_12895;Dbxref=NCBI_GP:UUE96863.1;Name=UUE96863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449754.1;locus_tag=NDY24_12895;product=DUF2934 domain-containing protein;protein_id=UUE96863.1;transl_table=11 CP098602.1 Genbank gene 2911108 2913270 . + . ID=gene-NDY24_12900;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=NDY24_12900 CP098602.1 Protein Homology CDS 2911108 2913270 . + 0 ID=cds-UUE96864.1;Parent=gene-NDY24_12900;Dbxref=NCBI_GP:UUE96864.1;Name=UUE96864.1;Ontology_term=GO:0005980,GO:0004133;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010382022.1;locus_tag=NDY24_12900;product=glycogen debranching protein GlgX;protein_id=UUE96864.1;transl_table=11 CP098602.1 Genbank pseudogene 2913287 2913920 . + . ID=gene-NDY24_12905;Name=NDY24_12905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_12905;pseudo=true CP098602.1 Protein Homology CDS 2913287 2913920 . + 0 ID=cds-NDY24_12905;Parent=gene-NDY24_12905;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301281.1;locus_tag=NDY24_12905;product=NAD(P)H-binding protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2914304 2914528 . + . ID=gene-NDY24_12910;Name=NDY24_12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12910 CP098602.1 GeneMarkS-2+ CDS 2914304 2914528 . + 0 ID=cds-UUE96865.1;Parent=gene-NDY24_12910;Dbxref=NCBI_GP:UUE96865.1;Name=UUE96865.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_12910;product=hypothetical protein;protein_id=UUE96865.1;transl_table=11 CP098602.1 Genbank gene 2914786 2914862 . - . ID=gene-NDY24_12915;Name=NDY24_12915;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_12915 CP098602.1 cmsearch ncRNA 2914786 2914862 . - . ID=rna-NDY24_12915;Parent=gene-NDY24_12915;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_12915;product=sX9 sRNA CP098602.1 cmsearch exon 2914786 2914862 . - . ID=exon-NDY24_12915-1;Parent=rna-NDY24_12915;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_12915;product=sX9 sRNA CP098602.1 Genbank gene 2914918 2915697 . - . ID=gene-NDY24_12920;Name=NDY24_12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12920 CP098602.1 Protein Homology CDS 2914918 2915697 . - 0 ID=cds-UUE96866.1;Parent=gene-NDY24_12920;Dbxref=NCBI_GP:UUE96866.1;Name=UUE96866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901660.1;locus_tag=NDY24_12920;product=SDR family oxidoreductase;protein_id=UUE96866.1;transl_table=11 CP098602.1 Genbank gene 2916041 2917450 . + . ID=gene-NDY24_12925;Name=NDY24_12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12925 CP098602.1 Protein Homology CDS 2916041 2917450 . + 0 ID=cds-UUE96867.1;Parent=gene-NDY24_12925;Dbxref=NCBI_GP:UUE96867.1;Name=UUE96867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901659.1;locus_tag=NDY24_12925;product=FAD/NAD(P)-binding protein;protein_id=UUE96867.1;transl_table=11 CP098602.1 Genbank gene 2917976 2918407 . + . ID=gene-NDY24_12930;Name=NDY24_12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12930 CP098602.1 Protein Homology CDS 2917976 2918407 . + 0 ID=cds-UUE96868.1;Parent=gene-NDY24_12930;Dbxref=NCBI_GP:UUE96868.1;Name=UUE96868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156537.1;locus_tag=NDY24_12930;product=VirK family protein;protein_id=UUE96868.1;transl_table=11 CP098602.1 Genbank gene 2918440 2918877 . + . ID=gene-NDY24_12935;Name=NDY24_12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12935 CP098602.1 Protein Homology CDS 2918440 2918877 . + 0 ID=cds-UUE96869.1;Parent=gene-NDY24_12935;Dbxref=NCBI_GP:UUE96869.1;Name=UUE96869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993036.1;locus_tag=NDY24_12935;product=VirK family protein;protein_id=UUE96869.1;transl_table=11 CP098602.1 Genbank gene 2918963 2920423 . - . ID=gene-NDY24_12940;Name=NDY24_12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12940 CP098602.1 Protein Homology CDS 2918963 2920423 . - 0 ID=cds-UUE96870.1;Parent=gene-NDY24_12940;Dbxref=NCBI_GP:UUE96870.1;Name=UUE96870.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448756.1;locus_tag=NDY24_12940;product=efflux transporter outer membrane subunit;protein_id=UUE96870.1;transl_table=11 CP098602.1 Genbank gene 2920514 2921131 . + . ID=gene-NDY24_12945;Name=NDY24_12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12945 CP098602.1 Protein Homology CDS 2920514 2921131 . + 0 ID=cds-UUE96871.1;Parent=gene-NDY24_12945;Dbxref=NCBI_GP:UUE96871.1;Name=UUE96871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156539.1;locus_tag=NDY24_12945;product=TetR/AcrR family transcriptional regulator;protein_id=UUE96871.1;transl_table=11 CP098602.1 Genbank gene 2921209 2922357 . + . ID=gene-NDY24_12950;Name=NDY24_12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12950 CP098602.1 Protein Homology CDS 2921209 2922357 . + 0 ID=cds-UUE96872.1;Parent=gene-NDY24_12950;Dbxref=NCBI_GP:UUE96872.1;Name=UUE96872.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448754.1;locus_tag=NDY24_12950;product=efflux RND transporter periplasmic adaptor subunit;protein_id=UUE96872.1;transl_table=11 CP098602.1 Genbank gene 2922354 2925443 . + . ID=gene-NDY24_12955;Name=NDY24_12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12955 CP098602.1 Protein Homology CDS 2922354 2925443 . + 0 ID=cds-UUE96873.1;Parent=gene-NDY24_12955;Dbxref=NCBI_GP:UUE96873.1;Name=UUE96873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448753.1;locus_tag=NDY24_12955;product=efflux RND transporter permease subunit;protein_id=UUE96873.1;transl_table=11 CP098602.1 Genbank gene 2925719 2926051 . + . ID=gene-NDY24_12960;Name=NDY24_12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12960 CP098602.1 Protein Homology CDS 2925719 2926051 . + 0 ID=cds-UUE96874.1;Parent=gene-NDY24_12960;Dbxref=NCBI_GP:UUE96874.1;Name=UUE96874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301442.1;locus_tag=NDY24_12960;product=DUF6172 family protein;protein_id=UUE96874.1;transl_table=11 CP098602.1 Genbank gene 2926371 2927654 . - . ID=gene-NDY24_12965;Name=NDY24_12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12965 CP098602.1 Protein Homology CDS 2926371 2927654 . - 0 ID=cds-UUF00398.1;Parent=gene-NDY24_12965;Dbxref=NCBI_GP:UUF00398.1;Name=UUF00398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804610.1;locus_tag=NDY24_12965;product=DEAD/DEAH box helicase;protein_id=UUF00398.1;transl_table=11 CP098602.1 Genbank gene 2927999 2928220 . - . ID=gene-NDY24_12970;Name=NDY24_12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12970 CP098602.1 GeneMarkS-2+ CDS 2927999 2928220 . - 0 ID=cds-UUE96875.1;Parent=gene-NDY24_12970;Dbxref=NCBI_GP:UUE96875.1;Name=UUE96875.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_12970;product=hypothetical protein;protein_id=UUE96875.1;transl_table=11 CP098602.1 Genbank gene 2928999 2930453 . - . ID=gene-NDY24_12975;Name=NDY24_12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12975 CP098602.1 Protein Homology CDS 2928999 2930453 . - 0 ID=cds-UUE96876.1;Parent=gene-NDY24_12975;Dbxref=NCBI_GP:UUE96876.1;Name=UUE96876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050323.1;locus_tag=NDY24_12975;product=2-oxo acid dehydrogenase subunit E2;protein_id=UUE96876.1;transl_table=11 CP098602.1 Genbank gene 2930450 2930833 . - . ID=gene-NDY24_12980;Name=NDY24_12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12980 CP098602.1 Protein Homology CDS 2930450 2930833 . - 0 ID=cds-UUE96877.1;Parent=gene-NDY24_12980;Dbxref=NCBI_GP:UUE96877.1;Name=UUE96877.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156545.1;locus_tag=NDY24_12980;product=SH3 domain-containing protein;protein_id=UUE96877.1;transl_table=11 CP098602.1 Genbank gene 2930835 2931905 . - . ID=gene-NDY24_12985;Name=NDY24_12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12985 CP098602.1 Protein Homology CDS 2930835 2931905 . - 0 ID=cds-UUE96878.1;Parent=gene-NDY24_12985;Dbxref=NCBI_GP:UUE96878.1;Name=UUE96878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014161957.1;locus_tag=NDY24_12985;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=UUE96878.1;transl_table=11 CP098602.1 Genbank gene 2931898 2932986 . - . ID=gene-NDY24_12990;Name=pdhA;gbkey=Gene;gene=pdhA;gene_biotype=protein_coding;locus_tag=NDY24_12990 CP098602.1 Protein Homology CDS 2931898 2932986 . - 0 ID=cds-UUE96879.1;Parent=gene-NDY24_12990;Dbxref=NCBI_GP:UUE96879.1;Name=UUE96879.1;Ontology_term=GO:0006086,GO:0004739,GO:0045250;gbkey=CDS;gene=pdhA;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850583.1;locus_tag=NDY24_12990;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;protein_id=UUE96879.1;transl_table=11 CP098602.1 Genbank gene 2933163 2936744 . - . ID=gene-NDY24_12995;Name=NDY24_12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_12995 CP098602.1 Protein Homology CDS 2933163 2936744 . - 0 ID=cds-UUE96880.1;Parent=gene-NDY24_12995;Dbxref=NCBI_GP:UUE96880.1;Name=UUE96880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575533.1;locus_tag=NDY24_12995;product=lamin tail domain-containing protein;protein_id=UUE96880.1;transl_table=11 CP098602.1 Genbank gene 2937101 2937997 . + . ID=gene-NDY24_13000;Name=NDY24_13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13000 CP098602.1 Protein Homology CDS 2937101 2937997 . + 0 ID=cds-UUE96881.1;Parent=gene-NDY24_13000;Dbxref=NCBI_GP:UUE96881.1;Name=UUE96881.1;Ontology_term=GO:0019441,GO:0004833,GO:0020037;gbkey=CDS;go_function=tryptophan 2%2C3-dioxygenase activity|0004833||IEA,heme binding|0020037||IEA;go_process=tryptophan catabolic process to kynurenine|0019441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035685.1;locus_tag=NDY24_13000;product=tryptophan 2%2C3-dioxygenase family protein;protein_id=UUE96881.1;transl_table=11 CP098602.1 Genbank gene 2938509 2940029 . + . ID=gene-NDY24_13005;Name=NDY24_13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13005 CP098602.1 Protein Homology CDS 2938509 2940029 . + 0 ID=cds-UUE96882.1;Parent=gene-NDY24_13005;Dbxref=NCBI_GP:UUE96882.1;Name=UUE96882.1;Ontology_term=GO:0015833,GO:0015333,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=peptide:proton symporter activity|0015333||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509241.1;locus_tag=NDY24_13005;product=oligopeptide:H+ symporter;protein_id=UUE96882.1;transl_table=11 CP098602.1 Genbank gene 2940041 2940646 . + . ID=gene-NDY24_13010;Name=NDY24_13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13010 CP098602.1 Protein Homology CDS 2940041 2940646 . + 0 ID=cds-UUE96883.1;Parent=gene-NDY24_13010;Dbxref=NCBI_GP:UUE96883.1;Name=UUE96883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005931590.1;locus_tag=NDY24_13010;product=thioredoxin family protein;protein_id=UUE96883.1;transl_table=11 CP098602.1 Genbank gene 2940879 2941367 . - . ID=gene-NDY24_13015;Name=NDY24_13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13015 CP098602.1 Protein Homology CDS 2940879 2941367 . - 0 ID=cds-UUE96884.1;Parent=gene-NDY24_13015;Dbxref=NCBI_GP:UUE96884.1;Name=UUE96884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035688.1;locus_tag=NDY24_13015;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=UUE96884.1;transl_table=11 CP098602.1 Genbank gene 2941490 2942605 . + . ID=gene-NDY24_13020;Name=hppD;gbkey=Gene;gene=hppD;gene_biotype=protein_coding;locus_tag=NDY24_13020 CP098602.1 Protein Homology CDS 2941490 2942605 . + 0 ID=cds-UUE96885.1;Parent=gene-NDY24_13020;Dbxref=NCBI_GP:UUE96885.1;Name=UUE96885.1;Ontology_term=GO:0006559,GO:0006572,GO:0003868;gbkey=CDS;gene=hppD;go_function=4-hydroxyphenylpyruvate dioxygenase activity|0003868||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112910.1;locus_tag=NDY24_13020;product=4-hydroxyphenylpyruvate dioxygenase;protein_id=UUE96885.1;transl_table=11 CP098602.1 Genbank gene 2942769 2943200 . + . ID=gene-NDY24_13025;Name=NDY24_13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13025 CP098602.1 Protein Homology CDS 2942769 2943200 . + 0 ID=cds-UUE96886.1;Parent=gene-NDY24_13025;Dbxref=NCBI_GP:UUE96886.1;Name=UUE96886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346146.1;locus_tag=NDY24_13025;product=endonuclease domain-containing protein;protein_id=UUE96886.1;transl_table=11 CP098602.1 Genbank gene 2943197 2944564 . + . ID=gene-NDY24_13030;Name=hmgA;gbkey=Gene;gene=hmgA;gene_biotype=protein_coding;locus_tag=NDY24_13030 CP098602.1 Protein Homology CDS 2943197 2944564 . + 0 ID=cds-UUE96887.1;Parent=gene-NDY24_13030;Dbxref=NCBI_GP:UUE96887.1;Name=UUE96887.1;Ontology_term=GO:0006559,GO:0006572,GO:0004411;gbkey=CDS;gene=hmgA;go_function=homogentisate 1%2C2-dioxygenase activity|0004411||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050328.1;locus_tag=NDY24_13030;product=homogentisate 1%2C2-dioxygenase;protein_id=UUE96887.1;transl_table=11 CP098602.1 Genbank gene 2944948 2945928 . - . ID=gene-NDY24_13035;Name=NDY24_13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13035 CP098602.1 Protein Homology CDS 2944948 2945928 . - 0 ID=cds-UUE96888.1;Parent=gene-NDY24_13035;Dbxref=NCBI_GP:UUE96888.1;Name=UUE96888.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=NDY24_13035;product=IS5 family transposase;protein_id=UUE96888.1;transl_table=11 CP098602.1 Genbank pseudogene 2946487 2947508 . + . ID=gene-NDY24_13040;Name=NDY24_13040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_13040;pseudo=true CP098602.1 Protein Homology CDS 2946487 2947508 . + 0 ID=cds-NDY24_13040;Parent=gene-NDY24_13040;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013670.2;locus_tag=NDY24_13040;product=N-acetylmuramoyl-L-alanine amidase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 2947716 2948624 . - . ID=gene-NDY24_13045;Name=NDY24_13045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_13045;pseudo=true CP098602.1 Protein Homology CDS 2947716 2948624 . - 0 ID=cds-NDY24_13045;Parent=gene-NDY24_13045;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117303.1;locus_tag=NDY24_13045;product=contractile injection system protein%2C VgrG/Pvc8 family;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 2948929 2949219 . - . ID=gene-NDY24_13050;Name=NDY24_13050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_13050;pseudo=true CP098602.1 Protein Homology CDS 2948929 2949219 . - 0 ID=cds-NDY24_13050;Parent=gene-NDY24_13050;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165166.1;locus_tag=NDY24_13050;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2949365 2950443 . + . ID=gene-NDY24_13055;Name=NDY24_13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13055 CP098602.1 Protein Homology CDS 2949365 2949596 . + 0 ID=cds-UUF00399.1;Parent=gene-NDY24_13055;Dbxref=NCBI_GP:UUF00399.1;Name=UUF00399.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611839.1;locus_tag=NDY24_13055;product=IS3 family transposase;protein_id=UUF00399.1;transl_table=11 CP098602.1 Protein Homology CDS 2949596 2950443 . + 2 ID=cds-UUF00399.1;Parent=gene-NDY24_13055;Dbxref=NCBI_GP:UUF00399.1;Name=UUF00399.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611839.1;locus_tag=NDY24_13055;product=IS3 family transposase;protein_id=UUF00399.1;transl_table=11 CP098602.1 Genbank pseudogene 2950460 2950678 . - . ID=gene-NDY24_13060;Name=NDY24_13060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_13060;pseudo=true CP098602.1 Protein Homology CDS 2950460 2950678 . - 0 ID=cds-NDY24_13060;Parent=gene-NDY24_13060;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165166.1;locus_tag=NDY24_13060;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2950877 2951503 . + . ID=gene-NDY24_13065;Name=NDY24_13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13065 CP098602.1 Protein Homology CDS 2950877 2951503 . + 0 ID=cds-UUF00400.1;Parent=gene-NDY24_13065;Dbxref=NCBI_GP:UUF00400.1;Name=UUF00400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575546.1;locus_tag=NDY24_13065;product=lectin;protein_id=UUF00400.1;transl_table=11 CP098602.1 Genbank gene 2951580 2951999 . - . ID=gene-NDY24_13070;Name=NDY24_13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13070 CP098602.1 Protein Homology CDS 2951580 2951999 . - 0 ID=cds-UUE96889.1;Parent=gene-NDY24_13070;Dbxref=NCBI_GP:UUE96889.1;Name=UUE96889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002808317.1;locus_tag=NDY24_13070;product=Na+/H+ antiporter subunit G;protein_id=UUE96889.1;transl_table=11 CP098602.1 Genbank gene 2951996 2952280 . - . ID=gene-NDY24_13075;Name=NDY24_13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13075 CP098602.1 Protein Homology CDS 2951996 2952280 . - 0 ID=cds-UUE96890.1;Parent=gene-NDY24_13075;Dbxref=NCBI_GP:UUE96890.1;Name=UUE96890.1;Ontology_term=GO:0034220,GO:0015075;gbkey=CDS;go_function=ion transmembrane transporter activity|0015075||IEA;go_process=ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501684.1;locus_tag=NDY24_13075;product=K+/H+ antiporter subunit F;protein_id=UUE96890.1;transl_table=11 CP098602.1 Genbank gene 2952277 2952783 . - . ID=gene-NDY24_13080;Name=NDY24_13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13080 CP098602.1 Protein Homology CDS 2952277 2952783 . - 0 ID=cds-UUE96891.1;Parent=gene-NDY24_13080;Dbxref=NCBI_GP:UUE96891.1;Name=UUE96891.1;Ontology_term=GO:0006812,GO:0008324,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967828.1;locus_tag=NDY24_13080;product=Na+/H+ antiporter subunit E;protein_id=UUE96891.1;transl_table=11 CP098602.1 Genbank gene 2952780 2954324 . - . ID=gene-NDY24_13085;Name=NDY24_13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13085 CP098602.1 Protein Homology CDS 2952780 2954324 . - 0 ID=cds-UUE96892.1;Parent=gene-NDY24_13085;Dbxref=NCBI_GP:UUE96892.1;Name=UUE96892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161271.1;locus_tag=NDY24_13085;product=monovalent cation/H+ antiporter subunit D;protein_id=UUE96892.1;transl_table=11 CP098602.1 Genbank gene 2954321 2954695 . - . ID=gene-NDY24_13090;Name=NDY24_13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13090 CP098602.1 Protein Homology CDS 2954321 2954695 . - 0 ID=cds-UUE96893.1;Parent=gene-NDY24_13090;Dbxref=NCBI_GP:UUE96893.1;Name=UUE96893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346152.1;locus_tag=NDY24_13090;product=Na+/H+ antiporter subunit C;protein_id=UUE96893.1;transl_table=11 CP098602.1 Genbank gene 2954695 2957523 . - . ID=gene-NDY24_13095;Name=NDY24_13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13095 CP098602.1 Protein Homology CDS 2954695 2957523 . - 0 ID=cds-UUE96894.1;Parent=gene-NDY24_13095;Dbxref=NCBI_GP:UUE96894.1;Name=UUE96894.1;Ontology_term=GO:0098662,GO:0005451;gbkey=CDS;go_function=monovalent cation:proton antiporter activity|0005451||IEA;go_process=inorganic cation transmembrane transport|0098662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302198.1;locus_tag=NDY24_13095;product=monovalent cation/H+ antiporter subunit A;protein_id=UUE96894.1;transl_table=11 CP098602.1 Genbank gene 2957690 2958592 . + . ID=gene-NDY24_13100;Name=NDY24_13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13100 CP098602.1 Protein Homology CDS 2957690 2958592 . + 0 ID=cds-UUE96895.1;Parent=gene-NDY24_13100;Dbxref=NCBI_GP:UUE96895.1;Name=UUE96895.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002808289.1;locus_tag=NDY24_13100;product=NAD-dependent epimerase/dehydratase family protein;protein_id=UUE96895.1;transl_table=11 CP098602.1 Genbank gene 2958608 2959093 . - . ID=gene-NDY24_13105;Name=NDY24_13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13105 CP098602.1 Protein Homology CDS 2958608 2959093 . - 0 ID=cds-UUE96896.1;Parent=gene-NDY24_13105;Dbxref=NCBI_GP:UUE96896.1;Name=UUE96896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575562.1;locus_tag=NDY24_13105;product=DUF962 domain-containing protein;protein_id=UUE96896.1;transl_table=11 CP098602.1 Genbank pseudogene 2959193 2960787 . - . ID=gene-NDY24_13110;Name=NDY24_13110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_13110;pseudo=true CP098602.1 Protein Homology CDS 2959193 2960787 . - 0 ID=cds-NDY24_13110;Parent=gene-NDY24_13110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967835.1;locus_tag=NDY24_13110;product=M4 family metallopeptidase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2961220 2962950 . - . ID=gene-NDY24_13115;Name=NDY24_13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13115 CP098602.1 Protein Homology CDS 2961220 2962950 . - 0 ID=cds-UUE96897.1;Parent=gene-NDY24_13115;Dbxref=NCBI_GP:UUE96897.1;Name=UUE96897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509227.1;locus_tag=NDY24_13115;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=UUE96897.1;transl_table=11 CP098602.1 Genbank gene 2963063 2963626 . - . ID=gene-NDY24_13120;Name=NDY24_13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13120 CP098602.1 Protein Homology CDS 2963063 2963626 . - 0 ID=cds-UUE96898.1;Parent=gene-NDY24_13120;Dbxref=NCBI_GP:UUE96898.1;Name=UUE96898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035703.1;locus_tag=NDY24_13120;product=hypothetical protein;protein_id=UUE96898.1;transl_table=11 CP098602.1 Genbank gene 2963706 2964203 . - . ID=gene-NDY24_13125;Name=NDY24_13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13125 CP098602.1 Protein Homology CDS 2963706 2964203 . - 0 ID=cds-UUE96899.1;Parent=gene-NDY24_13125;Dbxref=NCBI_GP:UUE96899.1;Name=UUE96899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035704.1;locus_tag=NDY24_13125;product=hypothetical protein;protein_id=UUE96899.1;transl_table=11 CP098602.1 Genbank pseudogene 2964506 2965176 . - . ID=gene-NDY24_13130;Name=NDY24_13130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_13130;pseudo=true CP098602.1 Protein Homology CDS 2964506 2965176 . - 0 ID=cds-NDY24_13130;Parent=gene-NDY24_13130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437186.1;locus_tag=NDY24_13130;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2965398 2966324 . - . ID=gene-NDY24_13135;Name=NDY24_13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13135 CP098602.1 Protein Homology CDS 2965398 2966324 . - 0 ID=cds-UUE96900.1;Parent=gene-NDY24_13135;Dbxref=NCBI_GP:UUE96900.1;Name=UUE96900.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448471.1;locus_tag=NDY24_13135;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=UUE96900.1;transl_table=11 CP098602.1 Genbank gene 2966531 2966860 . + . ID=gene-NDY24_13140;Name=NDY24_13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13140 CP098602.1 Protein Homology CDS 2966531 2966860 . + 0 ID=cds-UUE96901.1;Parent=gene-NDY24_13140;Dbxref=NCBI_GP:UUE96901.1;Name=UUE96901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157937.1;locus_tag=NDY24_13140;product=DnaJ domain-containing protein;protein_id=UUE96901.1;transl_table=11 CP098602.1 Genbank pseudogene 2967002 2967842 . - . ID=gene-NDY24_13145;Name=NDY24_13145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_13145;pseudo=true CP098602.1 Protein Homology CDS 2967002 2967842 . - 0 ID=cds-NDY24_13145;Parent=gene-NDY24_13145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015471660.1;locus_tag=NDY24_13145;product=outer membrane beta-barrel protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2967988 2968659 . + . ID=gene-NDY24_13150;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=NDY24_13150 CP098602.1 Protein Homology CDS 2967988 2968659 . + 0 ID=cds-UUE96902.1;Parent=gene-NDY24_13150;Dbxref=NCBI_GP:UUE96902.1;Name=UUE96902.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379428.1;locus_tag=NDY24_13150;product=ribulose-phosphate 3-epimerase;protein_id=UUE96902.1;transl_table=11 CP098602.1 Genbank gene 2968656 2969147 . + . ID=gene-NDY24_13155;Name=NDY24_13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13155 CP098602.1 Protein Homology CDS 2968656 2969147 . + 0 ID=cds-UUE96903.1;Parent=gene-NDY24_13155;Dbxref=NCBI_GP:UUE96903.1;Name=UUE96903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368051.1;locus_tag=NDY24_13155;product=GNAT family N-acetyltransferase;protein_id=UUE96903.1;transl_table=11 CP098602.1 Genbank gene 2969379 2970308 . + . ID=gene-NDY24_13160;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=NDY24_13160 CP098602.1 Protein Homology CDS 2969379 2970308 . + 0 ID=cds-UUE96904.1;Parent=gene-NDY24_13160;Dbxref=NCBI_GP:UUE96904.1;Name=UUE96904.1;Ontology_term=GO:0008150,GO:0001727,GO:0005575;gbkey=CDS;gene=yegS;go_component=cellular_component|0005575||IEA;go_function=lipid kinase activity|0001727||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035711.1;locus_tag=NDY24_13160;product=lipid kinase YegS;protein_id=UUE96904.1;transl_table=11 CP098602.1 Genbank gene 2970780 2972255 . + . ID=gene-NDY24_13165;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=NDY24_13165 CP098602.1 Protein Homology CDS 2970780 2972255 . + 0 ID=cds-UUE96905.1;Parent=gene-NDY24_13165;Dbxref=NCBI_GP:UUE96905.1;Name=UUE96905.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575582.1;locus_tag=NDY24_13165;product=anthranilate synthase component I;protein_id=UUE96905.1;transl_table=11 CP098602.1 Genbank pseudogene 2972255 2973378 . + . ID=gene-NDY24_13170;Name=NDY24_13170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_13170;pseudo=true CP098602.1 Protein Homology CDS 2972255 2973378 . + 0 ID=cds-NDY24_13170;Parent=gene-NDY24_13170;Note=frameshifted;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: protein motif:HMM:NF013384.2;locus_tag=NDY24_13170;product=beta-eliminating lyase-related protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2974035 2976197 . - . ID=gene-NDY24_13175;Name=NDY24_13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13175 CP098602.1 Protein Homology CDS 2974035 2976197 . - 0 ID=cds-UUE96906.1;Parent=gene-NDY24_13175;Dbxref=NCBI_GP:UUE96906.1;Name=UUE96906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002808557.1;locus_tag=NDY24_13175;product=type III effector protein XopP;protein_id=UUE96906.1;transl_table=11 CP098602.1 Genbank gene 2976836 2977753 . + . ID=gene-NDY24_13180;Name=NDY24_13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13180 CP098602.1 Protein Homology CDS 2976836 2977753 . + 0 ID=cds-UUE96907.1;Parent=gene-NDY24_13180;Dbxref=NCBI_GP:UUE96907.1;Name=UUE96907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507126.1;locus_tag=NDY24_13180;product=type III effector;protein_id=UUE96907.1;transl_table=11 CP098602.1 Genbank gene 2977900 2977986 . + . ID=gene-NDY24_13185;Name=NDY24_13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13185 CP098602.1 Protein Homology CDS 2977900 2977986 . + 0 ID=cds-UUF00401.1;Parent=gene-NDY24_13185;Dbxref=NCBI_GP:UUF00401.1;Name=UUF00401.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013677.2;locus_tag=NDY24_13185;product=hypothetical protein;protein_id=UUF00401.1;transl_table=11 CP098602.1 Genbank pseudogene 2978028 2978295 . + . ID=gene-NDY24_13190;Name=NDY24_13190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_13190;pseudo=true CP098602.1 Protein Homology CDS 2978028 2978295 . + 0 ID=cds-NDY24_13190;Parent=gene-NDY24_13190;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612184.1;locus_tag=NDY24_13190;product=IS3 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2978588 2980027 . + . ID=gene-NDY24_13195;Name=NDY24_13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13195 CP098602.1 Protein Homology CDS 2978588 2980027 . + 0 ID=cds-UUE96908.1;Parent=gene-NDY24_13195;Dbxref=NCBI_GP:UUE96908.1;Name=UUE96908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016944047.1;locus_tag=NDY24_13195;product=hypothetical protein;protein_id=UUE96908.1;transl_table=11 CP098602.1 Genbank pseudogene 2980419 2983328 . + . ID=gene-NDY24_13200;Name=NDY24_13200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_13200;pseudo=true CP098602.1 Protein Homology CDS 2980419 2983328 . + 0 ID=cds-NDY24_13200;Parent=gene-NDY24_13200;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448478.1;locus_tag=NDY24_13200;product=serine kinase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 2983880 2984173 . - . ID=gene-NDY24_13205;Name=NDY24_13205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_13205;pseudo=true CP098602.1 Protein Homology CDS 2983880 2984173 . - 0 ID=cds-NDY24_13205;Parent=gene-NDY24_13205;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037261.1;locus_tag=NDY24_13205;product=IS1595 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2984335 2984697 . - . ID=gene-NDY24_13210;Name=NDY24_13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13210 CP098602.1 GeneMarkS-2+ CDS 2984335 2984697 . - 0 ID=cds-UUE96909.1;Parent=gene-NDY24_13210;Dbxref=NCBI_GP:UUE96909.1;Name=UUE96909.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_13210;product=hypothetical protein;protein_id=UUE96909.1;transl_table=11 CP098602.1 Genbank pseudogene 2984977 2985927 . + . ID=gene-NDY24_13215;Name=NDY24_13215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_13215;pseudo=true CP098602.1 Protein Homology CDS 2984977 2985927 . + 0 ID=cds-NDY24_13215;Parent=gene-NDY24_13215;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007635327.1;locus_tag=NDY24_13215;product=IS481 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2985991 2986971 . + . ID=gene-NDY24_13220;Name=NDY24_13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13220 CP098602.1 Protein Homology CDS 2985991 2986971 . + 0 ID=cds-UUE96910.1;Parent=gene-NDY24_13220;Dbxref=NCBI_GP:UUE96910.1;Name=UUE96910.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=NDY24_13220;product=IS5 family transposase;protein_id=UUE96910.1;transl_table=11 CP098602.1 Genbank pseudogene 2987060 2990426 . - . ID=gene-NDY24_13225;Name=NDY24_13225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_13225;pseudo=true CP098602.1 Protein Homology CDS 2987060 2990426 . - 0 ID=cds-NDY24_13225;Parent=gene-NDY24_13225;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301754.1;locus_tag=NDY24_13225;product=type III effector protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2990547 2991527 . - . ID=gene-NDY24_13230;Name=NDY24_13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13230 CP098602.1 Protein Homology CDS 2990547 2991527 . - 0 ID=cds-UUE96911.1;Parent=gene-NDY24_13230;Dbxref=NCBI_GP:UUE96911.1;Name=UUE96911.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=NDY24_13230;product=IS5 family transposase;protein_id=UUE96911.1;transl_table=11 CP098602.1 Genbank pseudogene 2991590 2993026 . - . ID=gene-NDY24_13235;Name=NDY24_13235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_13235;pseudo=true CP098602.1 Protein Homology CDS 2991590 2993026 . - 0 ID=cds-NDY24_13235;Parent=gene-NDY24_13235;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091462.1;locus_tag=NDY24_13235;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2993083 2994063 . + . ID=gene-NDY24_13240;Name=NDY24_13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13240 CP098602.1 Protein Homology CDS 2993083 2994063 . + 0 ID=cds-UUE96912.1;Parent=gene-NDY24_13240;Dbxref=NCBI_GP:UUE96912.1;Name=UUE96912.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=NDY24_13240;product=IS5 family transposase;protein_id=UUE96912.1;transl_table=11 CP098602.1 Genbank gene 2994154 2994507 . - . ID=gene-NDY24_13245;Name=NDY24_13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13245 CP098602.1 GeneMarkS-2+ CDS 2994154 2994507 . - 0 ID=cds-UUE96913.1;Parent=gene-NDY24_13245;Dbxref=NCBI_GP:UUE96913.1;Name=UUE96913.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_13245;product=hypothetical protein;protein_id=UUE96913.1;transl_table=11 CP098602.1 Genbank gene 2994545 2995411 . - . ID=gene-NDY24_13250;Name=NDY24_13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13250 CP098602.1 GeneMarkS-2+ CDS 2994545 2995411 . - 0 ID=cds-UUE96914.1;Parent=gene-NDY24_13250;Dbxref=NCBI_GP:UUE96914.1;Name=UUE96914.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_13250;product=hypothetical protein;protein_id=UUE96914.1;transl_table=11 CP098602.1 Genbank gene 2995365 2995703 . - . ID=gene-NDY24_13255;Name=NDY24_13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13255 CP098602.1 GeneMarkS-2+ CDS 2995365 2995703 . - 0 ID=cds-UUE96915.1;Parent=gene-NDY24_13255;Dbxref=NCBI_GP:UUE96915.1;Name=UUE96915.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_13255;product=hypothetical protein;protein_id=UUE96915.1;transl_table=11 CP098602.1 Genbank pseudogene 2996495 2997472 . - . ID=gene-NDY24_13260;Name=NDY24_13260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_13260;pseudo=true CP098602.1 Protein Homology CDS 2996495 2997472 . - 0 ID=cds-NDY24_13260;Parent=gene-NDY24_13260;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=NDY24_13260;product=IS5 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 2997847 2998293 . + . ID=gene-NDY24_13265;Name=NDY24_13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13265 CP098602.1 Protein Homology CDS 2997847 2998293 . + 0 ID=cds-UUF00402.1;Parent=gene-NDY24_13265;Dbxref=NCBI_GP:UUF00402.1;Name=UUF00402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367891.1;locus_tag=NDY24_13265;product=hypothetical protein;protein_id=UUF00402.1;transl_table=11 CP098602.1 Genbank gene 2998290 3000323 . + . ID=gene-NDY24_13270;Name=NDY24_13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13270 CP098602.1 Protein Homology CDS 2998290 3000323 . + 0 ID=cds-UUE96916.1;Parent=gene-NDY24_13270;Dbxref=NCBI_GP:UUE96916.1;Name=UUE96916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507103.1;locus_tag=NDY24_13270;product=hypothetical protein;protein_id=UUE96916.1;transl_table=11 CP098602.1 Genbank gene 3000435 3004391 . - . ID=gene-NDY24_13275;Name=NDY24_13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13275 CP098602.1 Protein Homology CDS 3000435 3004391 . - 0 ID=cds-UUE96917.1;Parent=gene-NDY24_13275;Dbxref=NCBI_GP:UUE96917.1;Name=UUE96917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451046.1;locus_tag=NDY24_13275;product=hypothetical protein;protein_id=UUE96917.1;transl_table=11 CP098602.1 Genbank gene 3004648 3005280 . - . ID=gene-NDY24_13280;Name=NDY24_13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13280 CP098602.1 Protein Homology CDS 3004648 3005280 . - 0 ID=cds-UUE96918.1;Parent=gene-NDY24_13280;Dbxref=NCBI_GP:UUE96918.1;Name=UUE96918.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015187.2;locus_tag=NDY24_13280;product=pectate lyase;protein_id=UUE96918.1;transl_table=11 CP098602.1 Genbank gene 3005433 3005630 . + . ID=gene-NDY24_13285;Name=NDY24_13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13285 CP098602.1 GeneMarkS-2+ CDS 3005433 3005630 . + 0 ID=cds-UUE96919.1;Parent=gene-NDY24_13285;Dbxref=NCBI_GP:UUE96919.1;Name=UUE96919.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_13285;product=hypothetical protein;protein_id=UUE96919.1;transl_table=11 CP098602.1 Genbank gene 3005972 3006442 . - . ID=gene-NDY24_13290;Name=NDY24_13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13290 CP098602.1 Protein Homology CDS 3005972 3006442 . - 0 ID=cds-UUE96920.1;Parent=gene-NDY24_13290;Dbxref=NCBI_GP:UUE96920.1;Name=UUE96920.1;Ontology_term=GO:0030254;gbkey=CDS;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912720.1;locus_tag=NDY24_13290;product=CesT family type III secretion system chaperone;protein_id=UUE96920.1;transl_table=11 CP098602.1 Genbank gene 3006511 3006777 . - . ID=gene-NDY24_13295;Name=NDY24_13295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13295 CP098602.1 GeneMarkS-2+ CDS 3006511 3006777 . - 0 ID=cds-UUE96921.1;Parent=gene-NDY24_13295;Dbxref=NCBI_GP:UUE96921.1;Name=UUE96921.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_13295;product=hypothetical protein;protein_id=UUE96921.1;transl_table=11 CP098602.1 Genbank gene 3006851 3007093 . - . ID=gene-NDY24_13300;Name=NDY24_13300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13300 CP098602.1 GeneMarkS-2+ CDS 3006851 3007093 . - 0 ID=cds-UUE96922.1;Parent=gene-NDY24_13300;Dbxref=NCBI_GP:UUE96922.1;Name=UUE96922.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_13300;product=serine kinase;protein_id=UUE96922.1;transl_table=11 CP098602.1 Genbank gene 3007086 3008051 . - . ID=gene-NDY24_13305;Name=NDY24_13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13305 CP098602.1 Protein Homology CDS 3007086 3008051 . - 0 ID=cds-UUE96923.1;Parent=gene-NDY24_13305;Dbxref=NCBI_GP:UUE96923.1;Name=UUE96923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965398.1;locus_tag=NDY24_13305;product=serine kinase;protein_id=UUE96923.1;transl_table=11 CP098602.1 Genbank gene 3008048 3008863 . - . ID=gene-NDY24_13310;Name=NDY24_13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13310 CP098602.1 Protein Homology CDS 3008048 3008863 . - 0 ID=cds-UUE96924.1;Parent=gene-NDY24_13310;Dbxref=NCBI_GP:UUE96924.1;Name=UUE96924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438891.1;locus_tag=NDY24_13310;product=4-hydroxyphenylacetate catabolism regulator HpaA;protein_id=UUE96924.1;transl_table=11 CP098602.1 Genbank gene 3008860 3009120 . - . ID=gene-NDY24_13315;Name=sctS;gbkey=Gene;gene=sctS;gene_biotype=protein_coding;locus_tag=NDY24_13315 CP098602.1 Protein Homology CDS 3008860 3009120 . - 0 ID=cds-UUE96925.1;Parent=gene-NDY24_13315;Dbxref=NCBI_GP:UUE96925.1;Name=UUE96925.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctS;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901415.1;locus_tag=NDY24_13315;product=type III secretion system export apparatus subunit SctS;protein_id=UUE96925.1;transl_table=11 CP098602.1 Genbank gene 3009125 3009769 . - . ID=gene-NDY24_13320;Name=sctR;gbkey=Gene;gene=sctR;gene_biotype=protein_coding;locus_tag=NDY24_13320 CP098602.1 Protein Homology CDS 3009125 3009769 . - 0 ID=cds-UUE96926.1;Parent=gene-NDY24_13320;Dbxref=NCBI_GP:UUE96926.1;Name=UUE96926.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctR;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158888.1;locus_tag=NDY24_13320;product=type III secretion system export apparatus subunit SctR;protein_id=UUE96926.1;transl_table=11 CP098602.1 Genbank gene 3009756 3010709 . - . ID=gene-NDY24_13325;Name=sctQ;gbkey=Gene;gene=sctQ;gene_biotype=protein_coding;locus_tag=NDY24_13325 CP098602.1 Protein Homology CDS 3009756 3010709 . - 0 ID=cds-UUF00403.1;Parent=gene-NDY24_13325;Dbxref=NCBI_GP:UUF00403.1;Name=UUF00403.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctQ;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156505.1;locus_tag=NDY24_13325;product=type III secretion system cytoplasmic ring protein SctQ;protein_id=UUF00403.1;transl_table=11 CP098602.1 Genbank pseudogene 3010806 3011450 . - . ID=gene-NDY24_13330;Name=sctP;gbkey=Gene;gene=sctP;gene_biotype=pseudogene;locus_tag=NDY24_13330;pseudo=true CP098602.1 Protein Homology CDS 3010806 3011450 . - 0 ID=cds-NDY24_13330;Parent=gene-NDY24_13330;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;gene=sctP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575445.1;locus_tag=NDY24_13330;product=type III secretion system protein SctP;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3011450 3013372 . - . ID=gene-NDY24_13335;Name=NDY24_13335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13335 CP098602.1 Protein Homology CDS 3011450 3013372 . - 0 ID=cds-UUE96927.1;Parent=gene-NDY24_13335;Dbxref=NCBI_GP:UUE96927.1;Name=UUE96927.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438888.1;locus_tag=NDY24_13335;product=FHIPEP family type III secretion protein;protein_id=UUE96927.1;transl_table=11 CP098602.1 Genbank gene 3013381 3014454 . - . ID=gene-NDY24_13340;Name=sctU;gbkey=Gene;gene=sctU;gene_biotype=protein_coding;locus_tag=NDY24_13340 CP098602.1 Protein Homology CDS 3013381 3014454 . - 0 ID=cds-UUE96928.1;Parent=gene-NDY24_13340;Dbxref=NCBI_GP:UUE96928.1;Name=UUE96928.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctU;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912703.1;locus_tag=NDY24_13340;product=type III secretion system export apparatus subunit SctU;protein_id=UUE96928.1;transl_table=11 CP098602.1 Genbank gene 3014667 3015122 . + . ID=gene-NDY24_13345;Name=NDY24_13345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13345 CP098602.1 Protein Homology CDS 3014667 3015122 . + 0 ID=cds-UUE96929.1;Parent=gene-NDY24_13345;Dbxref=NCBI_GP:UUE96929.1;Name=UUE96929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156509.1;locus_tag=NDY24_13345;product=HrpB1 family type III secretion system apparatus protein;protein_id=UUE96929.1;transl_table=11 CP098602.1 Genbank gene 3015154 3015546 . + . ID=gene-NDY24_13350;Name=NDY24_13350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13350 CP098602.1 Protein Homology CDS 3015154 3015546 . + 0 ID=cds-UUE96930.1;Parent=gene-NDY24_13350;Dbxref=NCBI_GP:UUE96930.1;Name=UUE96930.1;Ontology_term=GO:0030254,GO:0003824,GO:0030257;gbkey=CDS;go_component=type III protein secretion system complex|0030257||IEA;go_function=catalytic activity|0003824||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505147.1;locus_tag=NDY24_13350;product=type III secretion protein HrpB2;protein_id=UUE96930.1;transl_table=11 CP098602.1 Genbank gene 3015548 3016312 . + . ID=gene-NDY24_13355;Name=sctJ;gbkey=Gene;gene=sctJ;gene_biotype=protein_coding;locus_tag=NDY24_13355 CP098602.1 Protein Homology CDS 3015548 3016312 . + 0 ID=cds-UUE96931.1;Parent=gene-NDY24_13355;Dbxref=NCBI_GP:UUE96931.1;Name=UUE96931.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctJ;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965380.1;locus_tag=NDY24_13355;product=type III secretion inner membrane ring lipoprotein SctJ;protein_id=UUE96931.1;transl_table=11 CP098602.1 Genbank gene 3016322 3016951 . + . ID=gene-NDY24_13360;Name=NDY24_13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13360 CP098602.1 Protein Homology CDS 3016322 3016951 . + 0 ID=cds-UUE96932.1;Parent=gene-NDY24_13360;Dbxref=NCBI_GP:UUE96932.1;Name=UUE96932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171652.1;locus_tag=NDY24_13360;product=type III secretion protein HrpB4;protein_id=UUE96932.1;transl_table=11 CP098602.1 Genbank gene 3016936 3017637 . + . ID=gene-NDY24_13365;Name=sctL;gbkey=Gene;gene=sctL;gene_biotype=protein_coding;locus_tag=NDY24_13365 CP098602.1 Protein Homology CDS 3016936 3017637 . + 0 ID=cds-UUE96933.1;Parent=gene-NDY24_13365;Dbxref=NCBI_GP:UUE96933.1;Name=UUE96933.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctL;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118385.1;locus_tag=NDY24_13365;product=type III secretion system stator protein SctL;protein_id=UUE96933.1;transl_table=11 CP098602.1 Genbank gene 3017627 3018955 . + . ID=gene-NDY24_13370;Name=sctN;gbkey=Gene;gene=sctN;gene_biotype=protein_coding;locus_tag=NDY24_13370 CP098602.1 Protein Homology CDS 3017627 3018955 . + 0 ID=cds-UUE96934.1;Parent=gene-NDY24_13370;Dbxref=NCBI_GP:UUE96934.1;Name=UUE96934.1;Ontology_term=GO:0030254,GO:0046961,GO:0030257;gbkey=CDS;gene=sctN;go_component=type III protein secretion system complex|0030257||IEA;go_function=proton-transporting ATPase activity%2C rotational mechanism|0046961||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972469.1;locus_tag=NDY24_13370;product=type III secretion system ATPase SctN;protein_id=UUE96934.1;transl_table=11 CP098602.1 Genbank gene 3018948 3019457 . + . ID=gene-NDY24_13375;Name=NDY24_13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13375 CP098602.1 Protein Homology CDS 3018948 3019457 . + 0 ID=cds-UUE96935.1;Parent=gene-NDY24_13375;Dbxref=NCBI_GP:UUE96935.1;Name=UUE96935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301113.1;locus_tag=NDY24_13375;product=type III secretion protein HrpB7;protein_id=UUE96935.1;transl_table=11 CP098602.1 Genbank gene 3019454 3020284 . + . ID=gene-NDY24_13380;Name=sctT;gbkey=Gene;gene=sctT;gene_biotype=protein_coding;locus_tag=NDY24_13380 CP098602.1 Protein Homology CDS 3019454 3020284 . + 0 ID=cds-UUE96936.1;Parent=gene-NDY24_13380;Dbxref=NCBI_GP:UUE96936.1;Name=UUE96936.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctT;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089146.1;locus_tag=NDY24_13380;product=type III secretion system export apparatus subunit SctT;protein_id=UUE96936.1;transl_table=11 CP098602.1 Genbank gene 3020465 3022285 . + . ID=gene-NDY24_13385;Name=sctC;gbkey=Gene;gene=sctC;gene_biotype=protein_coding;locus_tag=NDY24_13385 CP098602.1 Protein Homology CDS 3020465 3022285 . + 0 ID=cds-UUE96937.1;Parent=gene-NDY24_13385;Dbxref=NCBI_GP:UUE96937.1;Name=UUE96937.1;gbkey=CDS;gene=sctC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972464.1;locus_tag=NDY24_13385;product=type III secretion system outer membrane ring subunit SctC;protein_id=UUE96937.1;transl_table=11 CP098602.1 Genbank gene 3022212 3022709 . - . ID=gene-NDY24_13390;Name=NDY24_13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13390 CP098602.1 Protein Homology CDS 3022212 3022709 . - 0 ID=cds-UUE96938.1;Parent=gene-NDY24_13390;Dbxref=NCBI_GP:UUE96938.1;Name=UUE96938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257092.1;locus_tag=NDY24_13390;product=hypothetical protein;protein_id=UUE96938.1;transl_table=11 CP098602.1 Genbank gene 3023175 3023657 . + . ID=gene-NDY24_13395;Name=NDY24_13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13395 CP098602.1 Protein Homology CDS 3023175 3023657 . + 0 ID=cds-UUF00404.1;Parent=gene-NDY24_13395;Dbxref=NCBI_GP:UUF00404.1;Name=UUF00404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438883.1;locus_tag=NDY24_13395;product=lytic transglycosylase domain-containing protein;protein_id=UUF00404.1;transl_table=11 CP098602.1 Genbank gene 3023754 3025355 . - . ID=gene-NDY24_13400;Name=NDY24_13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13400 CP098602.1 Protein Homology CDS 3023754 3025355 . - 0 ID=cds-UUE96939.1;Parent=gene-NDY24_13400;Dbxref=NCBI_GP:UUE96939.1;Name=UUE96939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304790.1;locus_tag=NDY24_13400;product=hypothetical protein;protein_id=UUE96939.1;transl_table=11 CP098602.1 Genbank gene 3025984 3027564 . - . ID=gene-NDY24_13405;Name=NDY24_13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13405 CP098602.1 Protein Homology CDS 3025984 3027564 . - 0 ID=cds-UUE96940.1;Parent=gene-NDY24_13405;Dbxref=NCBI_GP:UUE96940.1;Name=UUE96940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174430.1;locus_tag=NDY24_13405;product=thioredoxin family protein;protein_id=UUE96940.1;transl_table=11 CP098602.1 Genbank gene 3027991 3029784 . + . ID=gene-NDY24_13410;Name=NDY24_13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13410 CP098602.1 Protein Homology CDS 3027991 3029784 . + 0 ID=cds-UUE96941.1;Parent=gene-NDY24_13410;Dbxref=NCBI_GP:UUE96941.1;Name=UUE96941.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451019.1;locus_tag=NDY24_13410;product=methyl-accepting chemotaxis protein;protein_id=UUE96941.1;transl_table=11 CP098602.1 Genbank gene 3030125 3030703 . + . ID=gene-NDY24_13415;Name=NDY24_13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13415 CP098602.1 Protein Homology CDS 3030125 3030703 . + 0 ID=cds-UUE96942.1;Parent=gene-NDY24_13415;Dbxref=NCBI_GP:UUE96942.1;Name=UUE96942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483050.1;locus_tag=NDY24_13415;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=UUE96942.1;transl_table=11 CP098602.1 Genbank gene 3030873 3031505 . + . ID=gene-NDY24_13420;Name=NDY24_13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13420 CP098602.1 Protein Homology CDS 3030873 3031505 . + 0 ID=cds-UUE96943.1;Parent=gene-NDY24_13420;Dbxref=NCBI_GP:UUE96943.1;Name=UUE96943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158907.1;locus_tag=NDY24_13420;product=flavin reductase family protein;protein_id=UUE96943.1;transl_table=11 CP098602.1 Genbank gene 3031622 3032659 . + . ID=gene-NDY24_13425;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=NDY24_13425 CP098602.1 Protein Homology CDS 3031622 3032659 . + 0 ID=cds-UUE96944.1;Parent=gene-NDY24_13425;Dbxref=NCBI_GP:UUE96944.1;Name=UUE96944.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089193.1;locus_tag=NDY24_13425;product=anthranilate phosphoribosyltransferase;protein_id=UUE96944.1;transl_table=11 CP098602.1 Genbank gene 3032842 3033639 . + . ID=gene-NDY24_13430;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=NDY24_13430 CP098602.1 Protein Homology CDS 3032842 3033639 . + 0 ID=cds-UUE96945.1;Parent=gene-NDY24_13430;Dbxref=NCBI_GP:UUE96945.1;Name=UUE96945.1;Ontology_term=GO:0006568,GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;go_process=tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902428.1;locus_tag=NDY24_13430;product=indole-3-glycerol phosphate synthase TrpC;protein_id=UUE96945.1;transl_table=11 CP098602.1 Genbank gene 3033632 3034348 . + . ID=gene-NDY24_13435;Name=NDY24_13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13435 CP098602.1 Protein Homology CDS 3033632 3034348 . + 0 ID=cds-UUE96946.1;Parent=gene-NDY24_13435;Dbxref=NCBI_GP:UUE96946.1;Name=UUE96946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002808250.1;locus_tag=NDY24_13435;product=haloacid dehalogenase-like hydrolase;protein_id=UUE96946.1;transl_table=11 CP098602.1 Genbank gene 3034698 3035390 . - . ID=gene-NDY24_13440;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=NDY24_13440 CP098602.1 Protein Homology CDS 3034698 3035390 . - 0 ID=cds-UUE96947.1;Parent=gene-NDY24_13440;Dbxref=NCBI_GP:UUE96947.1;Name=UUE96947.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368067.1;locus_tag=NDY24_13440;product=cAMP-activated global transcriptional regulator CRP;protein_id=UUE96947.1;transl_table=11 CP098602.1 Genbank gene 3035528 3036322 . + . ID=gene-NDY24_13445;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=NDY24_13445 CP098602.1 Protein Homology CDS 3035528 3036322 . + 0 ID=cds-UUE96948.1;Parent=gene-NDY24_13445;Dbxref=NCBI_GP:UUE96948.1;Name=UUE96948.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005411315.1;locus_tag=NDY24_13445;product=adenosylmethionine decarboxylase;protein_id=UUE96948.1;transl_table=11 CP098602.1 Genbank gene 3036477 3036788 . + . ID=gene-NDY24_13450;Name=NDY24_13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13450 CP098602.1 Protein Homology CDS 3036477 3036788 . + 0 ID=cds-UUE96949.1;Parent=gene-NDY24_13450;Dbxref=NCBI_GP:UUE96949.1;Name=UUE96949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451011.1;locus_tag=NDY24_13450;product=multidrug efflux SMR transporter;protein_id=UUE96949.1;transl_table=11 CP098602.1 Genbank gene 3036799 3037452 . - . ID=gene-NDY24_13455;Name=coq7;gbkey=Gene;gene=coq7;gene_biotype=protein_coding;locus_tag=NDY24_13455 CP098602.1 Protein Homology CDS 3036799 3037452 . - 0 ID=cds-UUE96950.1;Parent=gene-NDY24_13455;Dbxref=NCBI_GP:UUE96950.1;Name=UUE96950.1;Ontology_term=GO:0006744,GO:0004497;gbkey=CDS;gene=coq7;go_function=monooxygenase activity|0004497||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451010.1;locus_tag=NDY24_13455;product=2-polyprenyl-3-methyl-6-methoxy-1%2C4-benzoquinone monooxygenase;protein_id=UUE96950.1;transl_table=11 CP098602.1 Genbank gene 3037634 3038062 . + . ID=gene-NDY24_13460;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=NDY24_13460 CP098602.1 Protein Homology CDS 3037634 3038062 . + 0 ID=cds-UUF00405.1;Parent=gene-NDY24_13460;Dbxref=NCBI_GP:UUF00405.1;Name=UUF00405.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=NDY24_13460;product=50S ribosomal protein L13;protein_id=UUF00405.1;transl_table=11 CP098602.1 Genbank gene 3038065 3038457 . + . ID=gene-NDY24_13465;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=NDY24_13465 CP098602.1 Protein Homology CDS 3038065 3038457 . + 0 ID=cds-UUE96951.1;Parent=gene-NDY24_13465;Dbxref=NCBI_GP:UUE96951.1;Name=UUE96951.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=NDY24_13465;product=30S ribosomal protein S9;protein_id=UUE96951.1;transl_table=11 CP098602.1 Genbank gene 3038613 3038686 . - . ID=gene-NDY24_13470;Name=NDY24_13470;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_13470 CP098602.1 tRNAscan-SE tRNA 3038613 3038686 . - . ID=rna-NDY24_13470;Parent=gene-NDY24_13470;anticodon=(pos:complement(3038652..3038654));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_13470;product=tRNA-Gln CP098602.1 tRNAscan-SE exon 3038613 3038686 . - . ID=exon-NDY24_13470-1;Parent=rna-NDY24_13470;anticodon=(pos:complement(3038652..3038654));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_13470;product=tRNA-Gln CP098602.1 Genbank gene 3038739 3038815 . - . ID=gene-NDY24_13475;Name=NDY24_13475;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_13475 CP098602.1 tRNAscan-SE tRNA 3038739 3038815 . - . ID=rna-NDY24_13475;Parent=gene-NDY24_13475;anticodon=(pos:complement(3038779..3038781));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_13475;product=tRNA-Ala CP098602.1 tRNAscan-SE exon 3038739 3038815 . - . ID=exon-NDY24_13475-1;Parent=rna-NDY24_13475;anticodon=(pos:complement(3038779..3038781));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_13475;product=tRNA-Ala CP098602.1 Genbank gene 3038934 3039551 . + . ID=gene-NDY24_13480;Name=NDY24_13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13480 CP098602.1 Protein Homology CDS 3038934 3039551 . + 0 ID=cds-UUE96952.1;Parent=gene-NDY24_13480;Dbxref=NCBI_GP:UUE96952.1;Name=UUE96952.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167453.1;locus_tag=NDY24_13480;product=RNA pyrophosphohydrolase;protein_id=UUE96952.1;transl_table=11 CP098602.1 Genbank gene 3039632 3039841 . + . ID=gene-NDY24_13485;Name=NDY24_13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13485 CP098602.1 Protein Homology CDS 3039632 3039841 . + 0 ID=cds-UUE96953.1;Parent=gene-NDY24_13485;Dbxref=NCBI_GP:UUE96953.1;Name=UUE96953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483089.1;locus_tag=NDY24_13485;product=(2Fe-2S)-binding protein;protein_id=UUE96953.1;transl_table=11 CP098602.1 Genbank gene 3040088 3040558 . + . ID=gene-NDY24_13490;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=NDY24_13490 CP098602.1 Protein Homology CDS 3040088 3040558 . + 0 ID=cds-UUE96954.1;Parent=gene-NDY24_13490;Dbxref=NCBI_GP:UUE96954.1;Name=UUE96954.1;Ontology_term=GO:0006880,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular sequestering of iron ion|0006880||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002808230.1;locus_tag=NDY24_13490;product=bacterioferritin;protein_id=UUE96954.1;transl_table=11 CP098602.1 Genbank gene 3040644 3042950 . - . ID=gene-NDY24_13495;Name=NDY24_13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13495 CP098602.1 Protein Homology CDS 3040644 3042950 . - 0 ID=cds-UUE96955.1;Parent=gene-NDY24_13495;Dbxref=NCBI_GP:UUE96955.1;Name=UUE96955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902420.1;locus_tag=NDY24_13495;product=ATP-binding protein;protein_id=UUE96955.1;transl_table=11 CP098602.1 Genbank gene 3042952 3044907 . - . ID=gene-NDY24_13500;Name=NDY24_13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13500 CP098602.1 Protein Homology CDS 3042952 3044907 . - 0 ID=cds-UUE96956.1;Parent=gene-NDY24_13500;Dbxref=NCBI_GP:UUE96956.1;Name=UUE96956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015462808.1;locus_tag=NDY24_13500;product=EAL domain-containing protein;protein_id=UUE96956.1;transl_table=11 CP098602.1 Genbank gene 3044946 3045572 . - . ID=gene-NDY24_13505;Name=NDY24_13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13505 CP098602.1 Protein Homology CDS 3044946 3045572 . - 0 ID=cds-UUE96957.1;Parent=gene-NDY24_13505;Dbxref=NCBI_GP:UUE96957.1;Name=UUE96957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002808223.1;locus_tag=NDY24_13505;product=DUF4126 domain-containing protein;protein_id=UUE96957.1;transl_table=11 CP098602.1 Genbank gene 3045683 3046453 . + . ID=gene-NDY24_13510;Name=NDY24_13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13510 CP098602.1 Protein Homology CDS 3045683 3046453 . + 0 ID=cds-UUE96958.1;Parent=gene-NDY24_13510;Dbxref=NCBI_GP:UUE96958.1;Name=UUE96958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574003.1;locus_tag=NDY24_13510;product=hypothetical protein;protein_id=UUE96958.1;transl_table=11 CP098602.1 Genbank gene 3046458 3046907 . + . ID=gene-NDY24_13515;Name=NDY24_13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13515 CP098602.1 Protein Homology CDS 3046458 3046907 . + 0 ID=cds-UUE96959.1;Parent=gene-NDY24_13515;Dbxref=NCBI_GP:UUE96959.1;Name=UUE96959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483106.1;locus_tag=NDY24_13515;product=polymer-forming cytoskeletal protein;protein_id=UUE96959.1;transl_table=11 CP098602.1 Genbank gene 3046991 3047377 . + . ID=gene-NDY24_13520;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=NDY24_13520 CP098602.1 Protein Homology CDS 3046991 3047377 . + 0 ID=cds-UUE96960.1;Parent=gene-NDY24_13520;Dbxref=NCBI_GP:UUE96960.1;Name=UUE96960.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005411302.1;locus_tag=NDY24_13520;product=iron-sulfur cluster insertion protein ErpA;protein_id=UUE96960.1;transl_table=11 CP098602.1 Genbank gene 3047484 3048374 . + . ID=gene-NDY24_13525;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=NDY24_13525 CP098602.1 Protein Homology CDS 3047484 3048374 . + 0 ID=cds-UUE96961.1;Parent=gene-NDY24_13525;Dbxref=NCBI_GP:UUE96961.1;Name=UUE96961.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914180.1;locus_tag=NDY24_13525;product=NAD(+) diphosphatase;protein_id=UUE96961.1;transl_table=11 CP098602.1 Genbank gene 3048454 3049347 . + . ID=gene-NDY24_13530;Name=NDY24_13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13530 CP098602.1 Protein Homology CDS 3048454 3049347 . + 0 ID=cds-UUE96962.1;Parent=gene-NDY24_13530;Dbxref=NCBI_GP:UUE96962.1;Name=UUE96962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019768466.1;locus_tag=NDY24_13530;product=hypothetical protein;protein_id=UUE96962.1;transl_table=11 CP098602.1 Genbank gene 3049390 3049800 . - . ID=gene-NDY24_13535;Name=NDY24_13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13535 CP098602.1 Protein Homology CDS 3049390 3049800 . - 0 ID=cds-UUE96963.1;Parent=gene-NDY24_13535;Dbxref=NCBI_GP:UUE96963.1;Name=UUE96963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849923.1;locus_tag=NDY24_13535;product=DUF2752 domain-containing protein;protein_id=UUE96963.1;transl_table=11 CP098602.1 Genbank gene 3049800 3050144 . - . ID=gene-NDY24_13540;Name=NDY24_13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13540 CP098602.1 Protein Homology CDS 3049800 3050144 . - 0 ID=cds-UUE96964.1;Parent=gene-NDY24_13540;Dbxref=NCBI_GP:UUE96964.1;Name=UUE96964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804995.1;locus_tag=NDY24_13540;product=CD225/dispanin family protein;protein_id=UUE96964.1;transl_table=11 CP098602.1 Genbank gene 3050463 3052385 . - . ID=gene-NDY24_13545;Name=NDY24_13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13545 CP098602.1 Protein Homology CDS 3050463 3052385 . - 0 ID=cds-UUE96965.1;Parent=gene-NDY24_13545;Dbxref=NCBI_GP:UUE96965.1;Name=UUE96965.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155949.1;locus_tag=NDY24_13545;product=MFS transporter;protein_id=UUE96965.1;transl_table=11 CP098602.1 Genbank gene 3052568 3053704 . + . ID=gene-NDY24_13550;Name=NDY24_13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13550 CP098602.1 Protein Homology CDS 3052568 3053704 . + 0 ID=cds-UUF00406.1;Parent=gene-NDY24_13550;Dbxref=NCBI_GP:UUF00406.1;Name=UUF00406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302299.1;locus_tag=NDY24_13550;product=MFS transporter;protein_id=UUF00406.1;transl_table=11 CP098602.1 Genbank gene 3053839 3056052 . - . ID=gene-NDY24_13555;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=NDY24_13555 CP098602.1 Protein Homology CDS 3053839 3056052 . - 0 ID=cds-UUE96966.1;Parent=gene-NDY24_13555;Dbxref=NCBI_GP:UUE96966.1;Name=UUE96966.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155946.1;locus_tag=NDY24_13555;product=YccS family putative transporter;protein_id=UUE96966.1;transl_table=11 CP098602.1 Genbank gene 3056267 3057562 . - . ID=gene-NDY24_13560;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=NDY24_13560 CP098602.1 Protein Homology CDS 3056267 3057562 . - 0 ID=cds-UUE96967.1;Parent=gene-NDY24_13560;Dbxref=NCBI_GP:UUE96967.1;Name=UUE96967.1;Ontology_term=GO:0006189,GO:0009152,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155944.1;locus_tag=NDY24_13560;product=phosphoribosylamine--glycine ligase;protein_id=UUE96967.1;transl_table=11 CP098602.1 Genbank gene 3057688 3059271 . - . ID=gene-NDY24_13565;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=NDY24_13565 CP098602.1 Protein Homology CDS 3057688 3059271 . - 0 ID=cds-UUE96968.1;Parent=gene-NDY24_13565;Dbxref=NCBI_GP:UUE96968.1;Name=UUE96968.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302295.1;locus_tag=NDY24_13565;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=UUE96968.1;transl_table=11 CP098602.1 Genbank gene 3059559 3059960 . - . ID=gene-NDY24_13570;Name=NDY24_13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13570 CP098602.1 Protein Homology CDS 3059559 3059960 . - 0 ID=cds-UUE96969.1;Parent=gene-NDY24_13570;Dbxref=NCBI_GP:UUE96969.1;Name=UUE96969.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023996.2;locus_tag=NDY24_13570;product=DUF3757 domain-containing protein;protein_id=UUE96969.1;transl_table=11 CP098602.1 Genbank gene 3060089 3060475 . - . ID=gene-NDY24_13575;Name=NDY24_13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13575 CP098602.1 GeneMarkS-2+ CDS 3060089 3060475 . - 0 ID=cds-UUE96970.1;Parent=gene-NDY24_13575;Dbxref=NCBI_GP:UUE96970.1;Name=UUE96970.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_13575;product=hypothetical protein;protein_id=UUE96970.1;transl_table=11 CP098602.1 Genbank pseudogene 3060627 3060740 . - . ID=gene-NDY24_13580;Name=NDY24_13580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_13580;pseudo=true CP098602.1 Protein Homology CDS 3060627 3060740 . - 0 ID=cds-NDY24_13580;Parent=gene-NDY24_13580;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037261.1;locus_tag=NDY24_13580;product=IS1595 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 3060826 3061097 . - . ID=gene-NDY24_13585;Name=fis;gbkey=Gene;gene=fis;gene_biotype=pseudogene;locus_tag=NDY24_13585;pseudo=true CP098602.1 Protein Homology CDS 3060826 3061097 . - 0 ID=cds-NDY24_13585;Parent=gene-NDY24_13585;Note=frameshifted;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920134.1;locus_tag=NDY24_13585;product=DNA-binding transcriptional regulator Fis;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3062202 3066788 . + . ID=gene-NDY24_13590;Name=NDY24_13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13590 CP098602.1 Protein Homology CDS 3062202 3066788 . + 0 ID=cds-UUE96971.1;Parent=gene-NDY24_13590;Dbxref=NCBI_GP:UUE96971.1;Name=UUE96971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_058197395.1;locus_tag=NDY24_13590;product=Ice nucleation protein;protein_id=UUE96971.1;transl_table=11 CP098602.1 Genbank gene 3067137 3067409 . - . ID=gene-NDY24_13595;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=NDY24_13595 CP098602.1 Protein Homology CDS 3067137 3067409 . - 0 ID=cds-UUE96972.1;Parent=gene-NDY24_13595;Dbxref=NCBI_GP:UUE96972.1;Name=UUE96972.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920134.1;locus_tag=NDY24_13595;product=DNA-binding transcriptional regulator Fis;protein_id=UUE96972.1;transl_table=11 CP098602.1 Genbank gene 3067527 3068705 . - . ID=gene-NDY24_13600;Name=NDY24_13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13600 CP098602.1 Protein Homology CDS 3067527 3068705 . - 0 ID=cds-UUE96973.1;Parent=gene-NDY24_13600;Dbxref=NCBI_GP:UUE96973.1;Name=UUE96973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920136.1;locus_tag=NDY24_13600;product=DUF3426 domain-containing protein;protein_id=UUE96973.1;transl_table=11 CP098602.1 Genbank gene 3069031 3069408 . - . ID=gene-NDY24_13605;Name=NDY24_13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13605 CP098602.1 Protein Homology CDS 3069031 3069408 . - 0 ID=cds-UUE96974.1;Parent=gene-NDY24_13605;Dbxref=NCBI_GP:UUE96974.1;Name=UUE96974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005997552.1;locus_tag=NDY24_13605;product=helix-turn-helix domain-containing protein;protein_id=UUE96974.1;transl_table=11 CP098602.1 Genbank gene 3069552 3070064 . + . ID=gene-NDY24_13610;Name=NDY24_13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13610 CP098602.1 Protein Homology CDS 3069552 3070064 . + 0 ID=cds-UUE96975.1;Parent=gene-NDY24_13610;Dbxref=NCBI_GP:UUE96975.1;Name=UUE96975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571864.1;locus_tag=NDY24_13610;product=hypothetical protein;protein_id=UUE96975.1;transl_table=11 CP098602.1 Genbank gene 3070077 3070997 . - . ID=gene-NDY24_13615;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=NDY24_13615 CP098602.1 Protein Homology CDS 3070077 3070997 . - 0 ID=cds-UUE96976.1;Parent=gene-NDY24_13615;Dbxref=NCBI_GP:UUE96976.1;Name=UUE96976.1;Ontology_term=GO:0006464,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=cellular protein modification process|0006464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451534.1;locus_tag=NDY24_13615;product=50S ribosomal protein L11 methyltransferase;protein_id=UUE96976.1;transl_table=11 CP098602.1 Genbank gene 3071432 3072358 . + . ID=gene-NDY24_13620;Name=NDY24_13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13620 CP098602.1 Protein Homology CDS 3071432 3072358 . + 0 ID=cds-UUE96977.1;Parent=gene-NDY24_13620;Dbxref=NCBI_GP:UUE96977.1;Name=UUE96977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301597.1;locus_tag=NDY24_13620;product=hypothetical protein;protein_id=UUE96977.1;transl_table=11 CP098602.1 Genbank gene 3072355 3072723 . + . ID=gene-NDY24_13625;Name=NDY24_13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13625 CP098602.1 Protein Homology CDS 3072355 3072723 . + 0 ID=cds-UUE96978.1;Parent=gene-NDY24_13625;Dbxref=NCBI_GP:UUE96978.1;Name=UUE96978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257468.1;locus_tag=NDY24_13625;product=hypothetical protein;protein_id=UUE96978.1;transl_table=11 CP098602.1 Genbank gene 3072804 3074171 . - . ID=gene-NDY24_13630;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=NDY24_13630 CP098602.1 Protein Homology CDS 3072804 3074171 . - 0 ID=cds-UUE96979.1;Parent=gene-NDY24_13630;Dbxref=NCBI_GP:UUE96979.1;Name=UUE96979.1;Ontology_term=GO:0006633,GO:0003989,GO:0004075,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,biotin carboxylase activity|0004075||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017911501.1;locus_tag=NDY24_13630;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=UUE96979.1;transl_table=11 CP098602.1 Genbank gene 3074214 3074543 . - . ID=gene-NDY24_13635;Name=NDY24_13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13635 CP098602.1 Protein Homology CDS 3074214 3074543 . - 0 ID=cds-UUF00407.1;Parent=gene-NDY24_13635;Dbxref=NCBI_GP:UUF00407.1;Name=UUF00407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483181.1;locus_tag=NDY24_13635;product=four helix bundle protein;protein_id=UUF00407.1;transl_table=11 CP098602.1 Genbank gene 3074620 3075105 . - . ID=gene-NDY24_13640;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=NDY24_13640 CP098602.1 Protein Homology CDS 3074620 3075105 . - 0 ID=cds-UUE96980.1;Parent=gene-NDY24_13640;Dbxref=NCBI_GP:UUE96980.1;Name=UUE96980.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155928.1;locus_tag=NDY24_13640;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=UUE96980.1;transl_table=11 CP098602.1 Genbank gene 3075197 3075643 . - . ID=gene-NDY24_13645;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=NDY24_13645 CP098602.1 Protein Homology CDS 3075197 3075643 . - 0 ID=cds-UUE96981.1;Parent=gene-NDY24_13645;Dbxref=NCBI_GP:UUE96981.1;Name=UUE96981.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169658.1;locus_tag=NDY24_13645;product=type II 3-dehydroquinate dehydratase;protein_id=UUE96981.1;transl_table=11 CP098602.1 Genbank gene 3076037 3076864 . - . ID=gene-NDY24_13650;Name=NDY24_13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13650 CP098602.1 Protein Homology CDS 3076037 3076864 . - 0 ID=cds-UUE96982.1;Parent=gene-NDY24_13650;Dbxref=NCBI_GP:UUE96982.1;Name=UUE96982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451541.1;locus_tag=NDY24_13650;product=helix-turn-helix transcriptional regulator;protein_id=UUE96982.1;transl_table=11 CP098602.1 Genbank pseudogene 3076965 3077600 . + . ID=gene-NDY24_13655;Name=NDY24_13655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_13655;pseudo=true CP098602.1 Protein Homology CDS 3076965 3077600 . + 0 ID=cds-NDY24_13655;Parent=gene-NDY24_13655;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF016228.2;locus_tag=NDY24_13655;product=NAD-dependent epimerase/dehydratase family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3077684 3077851 . + . ID=gene-NDY24_13660;Name=NDY24_13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13660 CP098602.1 GeneMarkS-2+ CDS 3077684 3077851 . + 0 ID=cds-UUE96983.1;Parent=gene-NDY24_13660;Dbxref=NCBI_GP:UUE96983.1;Name=UUE96983.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_13660;product=hypothetical protein;protein_id=UUE96983.1;transl_table=11 CP098602.1 Genbank gene 3078087 3080438 . - . ID=gene-NDY24_13665;Name=NDY24_13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13665 CP098602.1 Protein Homology CDS 3078087 3080438 . - 0 ID=cds-UUF00408.1;Parent=gene-NDY24_13665;Dbxref=NCBI_GP:UUF00408.1;Name=UUF00408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257471.1;locus_tag=NDY24_13665;product=protein-disulfide reductase DsbD;protein_id=UUF00408.1;transl_table=11 CP098602.1 Genbank gene 3080435 3080767 . - . ID=gene-NDY24_13670;Name=NDY24_13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13670 CP098602.1 Protein Homology CDS 3080435 3080767 . - 0 ID=cds-UUE96984.1;Parent=gene-NDY24_13670;Dbxref=NCBI_GP:UUE96984.1;Name=UUE96984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368153.1;locus_tag=NDY24_13670;product=divalent-cation tolerance protein CutA;protein_id=UUE96984.1;transl_table=11 CP098602.1 Genbank gene 3081147 3082871 . - . ID=gene-NDY24_13675;Name=NDY24_13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13675 CP098602.1 Protein Homology CDS 3081147 3082871 . - 0 ID=cds-UUE96985.1;Parent=gene-NDY24_13675;Dbxref=NCBI_GP:UUE96985.1;Name=UUE96985.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903371.1;locus_tag=NDY24_13675;product=endonuclease;protein_id=UUE96985.1;transl_table=11 CP098602.1 Genbank gene 3083233 3083520 . + . ID=gene-NDY24_13680;Name=NDY24_13680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13680 CP098602.1 Protein Homology CDS 3083233 3083520 . + 0 ID=cds-UUE96986.1;Parent=gene-NDY24_13680;Dbxref=NCBI_GP:UUE96986.1;Name=UUE96986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303525.1;locus_tag=NDY24_13680;product=co-chaperone GroES;protein_id=UUE96986.1;transl_table=11 CP098602.1 Genbank gene 3083668 3085311 . + . ID=gene-NDY24_13685;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=NDY24_13685 CP098602.1 Protein Homology CDS 3083668 3085311 . + 0 ID=cds-UUE96987.1;Parent=gene-NDY24_13685;Dbxref=NCBI_GP:UUE96987.1;Name=UUE96987.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005411226.1;locus_tag=NDY24_13685;product=chaperonin GroEL;protein_id=UUE96987.1;transl_table=11 CP098602.1 Genbank pseudogene 3085637 3086376 . + . ID=gene-NDY24_13690;Name=NDY24_13690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_13690;pseudo=true CP098602.1 Protein Homology CDS 3085637 3086376 . + 0 ID=cds-NDY24_13690;Parent=gene-NDY24_13690;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012403.2;locus_tag=NDY24_13690;product=DEAD/DEAH box helicase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3086312 3087553 . + . ID=gene-NDY24_13695;Name=NDY24_13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13695 CP098602.1 Protein Homology CDS 3086312 3087553 . + 0 ID=cds-UUE96988.1;Parent=gene-NDY24_13695;Dbxref=NCBI_GP:UUE96988.1;Name=UUE96988.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012493.2;locus_tag=NDY24_13695;product=DEAD/DEAH box helicase;protein_id=UUE96988.1;transl_table=11 CP098602.1 Genbank gene 3087508 3087813 . + . ID=gene-NDY24_13700;Name=NDY24_13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13700 CP098602.1 GeneMarkS-2+ CDS 3087508 3087813 . + 0 ID=cds-UUE96989.1;Parent=gene-NDY24_13700;Dbxref=NCBI_GP:UUE96989.1;Name=UUE96989.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_13700;product=hypothetical protein;protein_id=UUE96989.1;transl_table=11 CP098602.1 Genbank gene 3088088 3088276 . + . ID=gene-NDY24_13705;Name=NDY24_13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13705 CP098602.1 GeneMarkS-2+ CDS 3088088 3088276 . + 0 ID=cds-UUE96990.1;Parent=gene-NDY24_13705;Dbxref=NCBI_GP:UUE96990.1;Name=UUE96990.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_13705;product=hypothetical protein;protein_id=UUE96990.1;transl_table=11 CP098602.1 Genbank gene 3088537 3089679 . + . ID=gene-NDY24_13710;Name=NDY24_13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13710 CP098602.1 Protein Homology CDS 3088537 3089679 . + 0 ID=cds-UUF00409.1;Parent=gene-NDY24_13710;Dbxref=NCBI_GP:UUF00409.1;Name=UUF00409.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016232.2;locus_tag=NDY24_13710;product=AAA family ATPase;protein_id=UUF00409.1;transl_table=11 CP098602.1 Genbank gene 3089685 3090608 . + . ID=gene-NDY24_13715;Name=NDY24_13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13715 CP098602.1 Protein Homology CDS 3089685 3090608 . + 0 ID=cds-UUE96991.1;Parent=gene-NDY24_13715;Dbxref=NCBI_GP:UUE96991.1;Name=UUE96991.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013704.2;locus_tag=NDY24_13715;product=site-specific DNA-methyltransferase;protein_id=UUE96991.1;transl_table=11 CP098602.1 Genbank pseudogene 3090647 3091462 . + . ID=gene-NDY24_13720;Name=NDY24_13720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_13720;pseudo=true CP098602.1 Protein Homology CDS 3090647 3091462 . + 0 ID=cds-NDY24_13720;Parent=gene-NDY24_13720;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003470500.1;locus_tag=NDY24_13720;product=site-specific DNA-methyltransferase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3091492 3092406 . + . ID=gene-NDY24_13725;Name=NDY24_13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13725 CP098602.1 Protein Homology CDS 3091492 3092406 . + 0 ID=cds-UUF00410.1;Parent=gene-NDY24_13725;Dbxref=NCBI_GP:UUF00410.1;Name=UUF00410.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF016724.2;locus_tag=NDY24_13725;product=DEAD/DEAH box helicase family protein;protein_id=UUF00410.1;transl_table=11 CP098602.1 Genbank gene 3092430 3093023 . + . ID=gene-NDY24_13730;Name=NDY24_13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13730 CP098602.1 GeneMarkS-2+ CDS 3092430 3093023 . + 0 ID=cds-UUE96992.1;Parent=gene-NDY24_13730;Dbxref=NCBI_GP:UUE96992.1;Name=UUE96992.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_13730;product=hypothetical protein;protein_id=UUE96992.1;transl_table=11 CP098602.1 Genbank gene 3093260 3094024 . + . ID=gene-NDY24_13735;Name=NDY24_13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13735 CP098602.1 GeneMarkS-2+ CDS 3093260 3094024 . + 0 ID=cds-UUE96993.1;Parent=gene-NDY24_13735;Dbxref=NCBI_GP:UUE96993.1;Name=UUE96993.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_13735;product=hypothetical protein;protein_id=UUE96993.1;transl_table=11 CP098602.1 Genbank gene 3093987 3094226 . + . ID=gene-NDY24_13740;Name=NDY24_13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13740 CP098602.1 GeneMarkS-2+ CDS 3093987 3094226 . + 0 ID=cds-UUE96994.1;Parent=gene-NDY24_13740;Dbxref=NCBI_GP:UUE96994.1;Name=UUE96994.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_13740;product=hypothetical protein;protein_id=UUE96994.1;transl_table=11 CP098602.1 Genbank gene 3094404 3095291 . + . ID=gene-NDY24_13745;Name=NDY24_13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13745 CP098602.1 Protein Homology CDS 3094404 3095291 . + 0 ID=cds-UUE96995.1;Parent=gene-NDY24_13745;Dbxref=NCBI_GP:UUE96995.1;Name=UUE96995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451548.1;locus_tag=NDY24_13745;product=dienelactone hydrolase family protein;protein_id=UUE96995.1;transl_table=11 CP098602.1 Genbank gene 3095514 3097628 . - . ID=gene-NDY24_13750;Name=NDY24_13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13750 CP098602.1 Protein Homology CDS 3095514 3097628 . - 0 ID=cds-UUE96996.1;Parent=gene-NDY24_13750;Dbxref=NCBI_GP:UUE96996.1;Name=UUE96996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451549.1;locus_tag=NDY24_13750;product=type III secretion system effector protein;protein_id=UUE96996.1;transl_table=11 CP098602.1 Genbank pseudogene 3098035 3100952 . + . ID=gene-NDY24_13755;Name=NDY24_13755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_13755;pseudo=true CP098602.1 Protein Homology CDS 3098035 3100952 . + 0 ID=cds-NDY24_13755;Parent=gene-NDY24_13755;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113290.1;locus_tag=NDY24_13755;product=TonB-dependent receptor;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3101751 3102824 . + . ID=gene-NDY24_13760;Name=NDY24_13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13760 CP098602.1 Protein Homology CDS 3101751 3102824 . + 0 ID=cds-UUE96997.1;Parent=gene-NDY24_13760;Dbxref=NCBI_GP:UUE96997.1;Name=UUE96997.1;Ontology_term=GO:0009423,GO:0003849;gbkey=CDS;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089228.1;locus_tag=NDY24_13760;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=UUE96997.1;transl_table=11 CP098602.1 Genbank gene 3103402 3104916 . - . ID=gene-NDY24_13765;Name=NDY24_13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13765 CP098602.1 Protein Homology CDS 3103402 3104916 . - 0 ID=cds-UUE96998.1;Parent=gene-NDY24_13765;Dbxref=NCBI_GP:UUE96998.1;Name=UUE96998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019662193.1;locus_tag=NDY24_13765;product=acetyl-CoA hydrolase/transferase family protein;protein_id=UUE96998.1;transl_table=11 CP098602.1 Genbank gene 3105083 3107260 . + . ID=gene-NDY24_13770;Name=NDY24_13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13770 CP098602.1 Protein Homology CDS 3105083 3107260 . + 0 ID=cds-UUE96999.1;Parent=gene-NDY24_13770;Dbxref=NCBI_GP:UUE96999.1;Name=UUE96999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155919.1;locus_tag=NDY24_13770;product=hypothetical protein;protein_id=UUE96999.1;transl_table=11 CP098602.1 Genbank gene 3107466 3109886 . + . ID=gene-NDY24_13775;Name=NDY24_13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13775 CP098602.1 Protein Homology CDS 3107466 3109886 . + 0 ID=cds-UUE97000.1;Parent=gene-NDY24_13775;Dbxref=NCBI_GP:UUE97000.1;Name=UUE97000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160243.1;locus_tag=NDY24_13775;product=hypothetical protein;protein_id=UUE97000.1;transl_table=11 CP098602.1 Genbank gene 3110306 3110815 . + . ID=gene-NDY24_13780;Name=NDY24_13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13780 CP098602.1 Protein Homology CDS 3110306 3110815 . + 0 ID=cds-UUE97001.1;Parent=gene-NDY24_13780;Dbxref=NCBI_GP:UUE97001.1;Name=UUE97001.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription%2C initiation|0006352||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038677.1;locus_tag=NDY24_13780;product=sigma-70 family RNA polymerase sigma factor;protein_id=UUE97001.1;transl_table=11 CP098602.1 Genbank gene 3110825 3111874 . + . ID=gene-NDY24_13785;Name=NDY24_13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13785 CP098602.1 Protein Homology CDS 3110825 3111874 . + 0 ID=cds-UUE97002.1;Parent=gene-NDY24_13785;Dbxref=NCBI_GP:UUE97002.1;Name=UUE97002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450964.1;locus_tag=NDY24_13785;product=FecR domain-containing protein;protein_id=UUE97002.1;transl_table=11 CP098602.1 Genbank gene 3111992 3114514 . + . ID=gene-NDY24_13790;Name=NDY24_13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13790 CP098602.1 Protein Homology CDS 3111992 3114514 . + 0 ID=cds-UUE97003.1;Parent=gene-NDY24_13790;Dbxref=NCBI_GP:UUE97003.1;Name=UUE97003.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509151.1;locus_tag=NDY24_13790;product=TonB-dependent siderophore receptor;protein_id=UUE97003.1;transl_table=11 CP098602.1 Genbank gene 3114555 3116177 . + . ID=gene-NDY24_13795;Name=NDY24_13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13795 CP098602.1 Protein Homology CDS 3114555 3116177 . + 0 ID=cds-UUE97004.1;Parent=gene-NDY24_13795;Dbxref=NCBI_GP:UUE97004.1;Name=UUE97004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902859.1;locus_tag=NDY24_13795;product=PepSY domain-containing protein;protein_id=UUE97004.1;transl_table=11 CP098602.1 Genbank gene 3116174 3116497 . + . ID=gene-NDY24_13800;Name=NDY24_13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13800 CP098602.1 Protein Homology CDS 3116174 3116497 . + 0 ID=cds-UUE97005.1;Parent=gene-NDY24_13800;Dbxref=NCBI_GP:UUE97005.1;Name=UUE97005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902860.1;locus_tag=NDY24_13800;product=hypothetical protein;protein_id=UUE97005.1;transl_table=11 CP098602.1 Genbank gene 3116485 3116832 . + . ID=gene-NDY24_13805;Name=NDY24_13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13805 CP098602.1 Protein Homology CDS 3116485 3116832 . + 0 ID=cds-UUE97006.1;Parent=gene-NDY24_13805;Dbxref=NCBI_GP:UUE97006.1;Name=UUE97006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450960.1;locus_tag=NDY24_13805;product=DUF3325 domain-containing protein;protein_id=UUE97006.1;transl_table=11 CP098602.1 Genbank gene 3117352 3120177 . + . ID=gene-NDY24_13810;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=NDY24_13810 CP098602.1 Protein Homology CDS 3117352 3120177 . + 0 ID=cds-UUE97007.1;Parent=gene-NDY24_13810;Dbxref=NCBI_GP:UUE97007.1;Name=UUE97007.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005929375.1;locus_tag=NDY24_13810;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=UUE97007.1;transl_table=11 CP098602.1 Genbank gene 3120286 3120705 . - . ID=gene-NDY24_13815;Name=NDY24_13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13815 CP098602.1 Protein Homology CDS 3120286 3120705 . - 0 ID=cds-UUE97008.1;Parent=gene-NDY24_13815;Dbxref=NCBI_GP:UUE97008.1;Name=UUE97008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509146.1;locus_tag=NDY24_13815;product=cyclophilin-like fold protein;protein_id=UUE97008.1;transl_table=11 CP098602.1 Genbank gene 3120814 3121839 . - . ID=gene-NDY24_13820;Name=NDY24_13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13820 CP098602.1 Protein Homology CDS 3120814 3121839 . - 0 ID=cds-UUE97009.1;Parent=gene-NDY24_13820;Dbxref=NCBI_GP:UUE97009.1;Name=UUE97009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014402674.1;locus_tag=NDY24_13820;product=alpha/beta hydrolase;protein_id=UUE97009.1;transl_table=11 CP098602.1 Genbank gene 3122328 3122885 . - . ID=gene-NDY24_13825;Name=NDY24_13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13825 CP098602.1 Protein Homology CDS 3122328 3122885 . - 0 ID=cds-UUE97010.1;Parent=gene-NDY24_13825;Dbxref=NCBI_GP:UUE97010.1;Name=UUE97010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450269.1;locus_tag=NDY24_13825;product=VUT family protein;protein_id=UUE97010.1;transl_table=11 CP098602.1 Genbank gene 3123108 3123611 . - . ID=gene-NDY24_13830;Name=NDY24_13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13830 CP098602.1 Protein Homology CDS 3123108 3123611 . - 0 ID=cds-UUE97011.1;Parent=gene-NDY24_13830;Dbxref=NCBI_GP:UUE97011.1;Name=UUE97011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450268.1;locus_tag=NDY24_13830;product=hypothetical protein;protein_id=UUE97011.1;transl_table=11 CP098602.1 Genbank gene 3123608 3124420 . - . ID=gene-NDY24_13835;Name=NDY24_13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13835 CP098602.1 Protein Homology CDS 3123608 3124420 . - 0 ID=cds-UUF00411.1;Parent=gene-NDY24_13835;Dbxref=NCBI_GP:UUF00411.1;Name=UUF00411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303515.1;locus_tag=NDY24_13835;product=DUF2145 domain-containing protein;protein_id=UUF00411.1;transl_table=11 CP098602.1 Genbank gene 3124521 3125468 . - . ID=gene-NDY24_13840;Name=NDY24_13840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13840 CP098602.1 Protein Homology CDS 3124521 3125468 . - 0 ID=cds-UUF00412.1;Parent=gene-NDY24_13840;Dbxref=NCBI_GP:UUF00412.1;Name=UUF00412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038688.1;locus_tag=NDY24_13840;product=mitochondrial fission ELM1 family protein;protein_id=UUF00412.1;transl_table=11 CP098602.1 Genbank pseudogene 3125605 3126197 . + . ID=gene-NDY24_13845;Name=NDY24_13845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_13845;pseudo=true CP098602.1 Protein Homology CDS 3125605 3126197 . + 0 ID=cds-NDY24_13845;Parent=gene-NDY24_13845;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914114.1;locus_tag=NDY24_13845;product=malonic semialdehyde reductase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3126289 3127020 . + . ID=gene-NDY24_13850;Name=NDY24_13850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13850 CP098602.1 Protein Homology CDS 3126289 3127020 . + 0 ID=cds-UUE97012.1;Parent=gene-NDY24_13850;Dbxref=NCBI_GP:UUE97012.1;Name=UUE97012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450264.1;locus_tag=NDY24_13850;product=YceI family protein;protein_id=UUE97012.1;transl_table=11 CP098602.1 Genbank gene 3127300 3127467 . + . ID=gene-NDY24_13855;Name=NDY24_13855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13855 CP098602.1 GeneMarkS-2+ CDS 3127300 3127467 . + 0 ID=cds-UUE97013.1;Parent=gene-NDY24_13855;Dbxref=NCBI_GP:UUE97013.1;Name=UUE97013.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_13855;product=hypothetical protein;protein_id=UUE97013.1;transl_table=11 CP098602.1 Genbank gene 3127593 3128381 . - . ID=gene-NDY24_13860;Name=NDY24_13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13860 CP098602.1 Protein Homology CDS 3127593 3128381 . - 0 ID=cds-UUE97014.1;Parent=gene-NDY24_13860;Dbxref=NCBI_GP:UUE97014.1;Name=UUE97014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452902.1;locus_tag=NDY24_13860;product=siderophore-interacting protein;protein_id=UUE97014.1;transl_table=11 CP098602.1 Genbank gene 3128860 3129450 . - . ID=gene-NDY24_13865;Name=NDY24_13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13865 CP098602.1 Protein Homology CDS 3128860 3129450 . - 0 ID=cds-UUE97015.1;Parent=gene-NDY24_13865;Dbxref=NCBI_GP:UUE97015.1;Name=UUE97015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089242.1;locus_tag=NDY24_13865;product=PadR family transcriptional regulator;protein_id=UUE97015.1;transl_table=11 CP098602.1 Genbank gene 3129820 3131466 . + . ID=gene-NDY24_13870;Name=mdcA;gbkey=Gene;gene=mdcA;gene_biotype=protein_coding;locus_tag=NDY24_13870 CP098602.1 Protein Homology CDS 3129820 3131466 . + 0 ID=cds-UUE97016.1;Parent=gene-NDY24_13870;Dbxref=NCBI_GP:UUE97016.1;Name=UUE97016.1;Ontology_term=GO:0006810,GO:0015451;gbkey=CDS;gene=mdcA;go_function=decarboxylation-driven active transmembrane transporter activity|0015451||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007963345.1;locus_tag=NDY24_13870;product=malonate decarboxylase subunit alpha;protein_id=UUE97016.1;transl_table=11 CP098602.1 Genbank gene 3131476 3131793 . + . ID=gene-NDY24_13875;Name=mdcC;gbkey=Gene;gene=mdcC;gene_biotype=protein_coding;locus_tag=NDY24_13875 CP098602.1 Protein Homology CDS 3131476 3131793 . + 0 ID=cds-UUE97017.1;Parent=gene-NDY24_13875;Dbxref=NCBI_GP:UUE97017.1;Name=UUE97017.1;gbkey=CDS;gene=mdcC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038694.1;locus_tag=NDY24_13875;product=malonate decarboxylase acyl carrier protein;protein_id=UUE97017.1;transl_table=11 CP098602.1 Genbank gene 3132025 3132927 . + . ID=gene-NDY24_13880;Name=NDY24_13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13880 CP098602.1 Protein Homology CDS 3132025 3132927 . + 0 ID=cds-UUF00413.1;Parent=gene-NDY24_13880;Dbxref=NCBI_GP:UUF00413.1;Name=UUF00413.1;Ontology_term=GO:0006633,GO:0044262,GO:0003989,GO:0016831,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,carboxy-lyase activity|0016831||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,cellular carbohydrate metabolic process|0044262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174364.1;locus_tag=NDY24_13880;product=biotin-independent malonate decarboxylase subunit beta;protein_id=UUF00413.1;transl_table=11 CP098602.1 Genbank gene 3132918 3133622 . + . ID=gene-NDY24_13885;Name=mdcE;gbkey=Gene;gene=mdcE;gene_biotype=protein_coding;locus_tag=NDY24_13885 CP098602.1 Protein Homology CDS 3132918 3133622 . + 0 ID=cds-UUE97018.1;Parent=gene-NDY24_13885;Dbxref=NCBI_GP:UUE97018.1;Name=UUE97018.1;Ontology_term=GO:0044262;gbkey=CDS;gene=mdcE;go_process=cellular carbohydrate metabolic process|0044262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007962423.1;locus_tag=NDY24_13885;product=biotin-independent malonate decarboxylase subunit gamma;protein_id=UUE97018.1;transl_table=11 CP098602.1 Genbank gene 3133625 3134269 . + . ID=gene-NDY24_13890;Name=mdcG;gbkey=Gene;gene=mdcG;gene_biotype=protein_coding;locus_tag=NDY24_13890 CP098602.1 Protein Homology CDS 3133625 3134269 . + 0 ID=cds-UUE97019.1;Parent=gene-NDY24_13890;Dbxref=NCBI_GP:UUE97019.1;Name=UUE97019.1;Ontology_term=GO:0051191;gbkey=CDS;gene=mdcG;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917376.1;locus_tag=NDY24_13890;product=malonate decarboxylase holo-[acyl-carrier-protein] synthase;protein_id=UUE97019.1;transl_table=11 CP098602.1 Genbank gene 3134377 3135201 . + . ID=gene-NDY24_13895;Name=mdcB;gbkey=Gene;gene=mdcB;gene_biotype=protein_coding;locus_tag=NDY24_13895 CP098602.1 Protein Homology CDS 3134377 3135201 . + 0 ID=cds-UUF00414.1;Parent=gene-NDY24_13895;Dbxref=NCBI_GP:UUF00414.1;Name=UUF00414.1;Ontology_term=GO:0019361,GO:0046917;gbkey=CDS;gene=mdcB;go_function=triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process|0019361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002805840.1;locus_tag=NDY24_13895;product=triphosphoribosyl-dephospho-CoA synthase MdcB;protein_id=UUF00414.1;transl_table=11 CP098602.1 Genbank gene 3135198 3136118 . + . ID=gene-NDY24_13900;Name=mdcH;gbkey=Gene;gene=mdcH;gene_biotype=protein_coding;locus_tag=NDY24_13900 CP098602.1 Protein Homology CDS 3135198 3136118 . + 0 ID=cds-UUE97020.1;Parent=gene-NDY24_13900;Dbxref=NCBI_GP:UUE97020.1;Name=UUE97020.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdcH;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007962436.1;locus_tag=NDY24_13900;product=malonate decarboxylase subunit epsilon;protein_id=UUE97020.1;transl_table=11 CP098602.1 Genbank gene 3136277 3137632 . + . ID=gene-NDY24_13905;Name=NDY24_13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13905 CP098602.1 Protein Homology CDS 3136277 3137632 . + 0 ID=cds-UUE97021.1;Parent=gene-NDY24_13905;Dbxref=NCBI_GP:UUE97021.1;Name=UUE97021.1;Ontology_term=GO:0055085,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379550.1;locus_tag=NDY24_13905;product=SLC13 family permease;protein_id=UUE97021.1;transl_table=11 CP098602.1 Genbank gene 3137712 3138431 . + . ID=gene-NDY24_13910;Name=NDY24_13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13910 CP098602.1 Protein Homology CDS 3137712 3138431 . + 0 ID=cds-UUE97022.1;Parent=gene-NDY24_13910;Dbxref=NCBI_GP:UUE97022.1;Name=UUE97022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155895.1;locus_tag=NDY24_13910;product=GntR family transcriptional regulator;protein_id=UUE97022.1;transl_table=11 CP098602.1 Genbank gene 3138620 3139243 . - . ID=gene-NDY24_13915;Name=NDY24_13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13915 CP098602.1 Protein Homology CDS 3138620 3139243 . - 0 ID=cds-UUE97023.1;Parent=gene-NDY24_13915;Dbxref=NCBI_GP:UUE97023.1;Name=UUE97023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155893.1;locus_tag=NDY24_13915;product=HAD hydrolase-like protein;protein_id=UUE97023.1;transl_table=11 CP098602.1 Genbank gene 3139403 3139479 . + . ID=gene-NDY24_13920;Name=NDY24_13920;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_13920 CP098602.1 cmsearch ncRNA 3139403 3139479 . + . ID=rna-NDY24_13920;Parent=gene-NDY24_13920;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_13920;product=sX9 sRNA CP098602.1 cmsearch exon 3139403 3139479 . + . ID=exon-NDY24_13920-1;Parent=rna-NDY24_13920;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_13920;product=sX9 sRNA CP098602.1 Genbank gene 3139484 3139903 . - . ID=gene-NDY24_13925;Name=NDY24_13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13925 CP098602.1 Protein Homology CDS 3139484 3139903 . - 0 ID=cds-UUE97024.1;Parent=gene-NDY24_13925;Dbxref=NCBI_GP:UUE97024.1;Name=UUE97024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483275.1;locus_tag=NDY24_13925;product=STAS domain-containing protein;protein_id=UUE97024.1;transl_table=11 CP098602.1 Genbank gene 3139900 3140331 . - . ID=gene-NDY24_13930;Name=NDY24_13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13930 CP098602.1 Protein Homology CDS 3139900 3140331 . - 0 ID=cds-UUE97025.1;Parent=gene-NDY24_13930;Dbxref=NCBI_GP:UUE97025.1;Name=UUE97025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917392.1;locus_tag=NDY24_13930;product=ATP-binding protein;protein_id=UUE97025.1;transl_table=11 CP098602.1 Genbank gene 3140328 3142262 . - . ID=gene-NDY24_13935;Name=NDY24_13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13935 CP098602.1 Protein Homology CDS 3140328 3142262 . - 0 ID=cds-UUF00415.1;Parent=gene-NDY24_13935;Dbxref=NCBI_GP:UUF00415.1;Name=UUF00415.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483280.1;locus_tag=NDY24_13935;product=SpoIIE family protein phosphatase;protein_id=UUF00415.1;transl_table=11 CP098602.1 Genbank pseudogene 3142546 3143147 . + . ID=gene-NDY24_13940;Name=NDY24_13940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_13940;pseudo=true CP098602.1 Protein Homology CDS 3142546 3143147 . + 0 ID=cds-NDY24_13940;Parent=gene-NDY24_13940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155889.1;locus_tag=NDY24_13940;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 3143144 3144468 . + . ID=gene-NDY24_13945;Name=NDY24_13945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_13945;pseudo=true CP098602.1 Protein Homology CDS 3143144 3144468 . + 0 ID=cds-NDY24_13945;Parent=gene-NDY24_13945;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452507.1;locus_tag=NDY24_13945;product=lipase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3145091 3146092 . + . ID=gene-NDY24_13950;Name=NDY24_13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13950 CP098602.1 Protein Homology CDS 3145091 3146092 . + 0 ID=cds-UUE97026.1;Parent=gene-NDY24_13950;Dbxref=NCBI_GP:UUE97026.1;Name=UUE97026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007962641.1;locus_tag=NDY24_13950;product=arabinogalactan endo-1%2C4-beta-galactosidase;protein_id=UUE97026.1;transl_table=11 CP098602.1 Genbank gene 3146460 3149147 . + . ID=gene-NDY24_13955;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=NDY24_13955 CP098602.1 Protein Homology CDS 3146460 3149147 . + 0 ID=cds-UUE97027.1;Parent=gene-NDY24_13955;Dbxref=NCBI_GP:UUE97027.1;Name=UUE97027.1;Ontology_term=GO:0006086,GO:0004738,GO:0045250;gbkey=CDS;gene=aceE;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660853.1;locus_tag=NDY24_13955;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=UUE97027.1;transl_table=11 CP098602.1 Genbank gene 3150103 3150306 . + . ID=gene-NDY24_13960;Name=NDY24_13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13960 CP098602.1 GeneMarkS-2+ CDS 3150103 3150306 . + 0 ID=cds-UUE97028.1;Parent=gene-NDY24_13960;Dbxref=NCBI_GP:UUE97028.1;Name=UUE97028.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_13960;product=hypothetical protein;protein_id=UUE97028.1;transl_table=11 CP098602.1 Genbank gene 3152412 3153110 . - . ID=gene-NDY24_13965;Name=NDY24_13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13965 CP098602.1 Protein Homology CDS 3152412 3153110 . - 0 ID=cds-UUE97029.1;Parent=gene-NDY24_13965;Dbxref=NCBI_GP:UUE97029.1;Name=UUE97029.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013921.2;locus_tag=NDY24_13965;product=transposase;protein_id=UUE97029.1;transl_table=11 CP098602.1 Genbank gene 3153092 3153613 . - . ID=gene-NDY24_13970;Name=NDY24_13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13970 CP098602.1 GeneMarkS-2+ CDS 3153092 3153613 . - 0 ID=cds-UUE97030.1;Parent=gene-NDY24_13970;Dbxref=NCBI_GP:UUE97030.1;Name=UUE97030.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_13970;product=hypothetical protein;protein_id=UUE97030.1;transl_table=11 CP098602.1 Genbank pseudogene 3154021 3155130 . - . ID=gene-NDY24_13975;Name=NDY24_13975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_13975;pseudo=true CP098602.1 Protein Homology CDS 3154021 3155130 . - 0 ID=cds-NDY24_13975;Parent=gene-NDY24_13975;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611839.1;locus_tag=NDY24_13975;product=IS3 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3155686 3156078 . - . ID=gene-NDY24_13980;Name=NDY24_13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13980 CP098602.1 Protein Homology CDS 3155686 3156078 . - 0 ID=cds-UUE97031.1;Parent=gene-NDY24_13980;Dbxref=NCBI_GP:UUE97031.1;Name=UUE97031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449354.1;locus_tag=NDY24_13980;product=hypothetical protein;protein_id=UUE97031.1;transl_table=11 CP098602.1 Genbank pseudogene 3156177 3156623 . - . ID=gene-NDY24_13985;Name=NDY24_13985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_13985;pseudo=true CP098602.1 Protein Homology CDS 3156177 3156623 . - 0 ID=cds-NDY24_13985;Parent=gene-NDY24_13985;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158119.1;locus_tag=NDY24_13985;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3158596 3159078 . - . ID=gene-NDY24_13990;Name=NDY24_13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13990 CP098602.1 GeneMarkS-2+ CDS 3158596 3159078 . - 0 ID=cds-UUE97032.1;Parent=gene-NDY24_13990;Dbxref=NCBI_GP:UUE97032.1;Name=UUE97032.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_13990;product=hypothetical protein;protein_id=UUE97032.1;transl_table=11 CP098602.1 Genbank gene 3159244 3159969 . - . ID=gene-NDY24_13995;Name=NDY24_13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_13995 CP098602.1 Protein Homology CDS 3159244 3159969 . - 0 ID=cds-UUE97033.1;Parent=gene-NDY24_13995;Dbxref=NCBI_GP:UUE97033.1;Name=UUE97033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806373.1;locus_tag=NDY24_13995;product=hypothetical protein;protein_id=UUE97033.1;transl_table=11 CP098602.1 Genbank gene 3160698 3161033 . + . ID=gene-NDY24_14000;Name=NDY24_14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14000 CP098602.1 Protein Homology CDS 3160698 3161033 . + 0 ID=cds-UUE97034.1;Parent=gene-NDY24_14000;Dbxref=NCBI_GP:UUE97034.1;Name=UUE97034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850803.1;locus_tag=NDY24_14000;product=type I toxin-antitoxin system SymE family toxin;protein_id=UUE97034.1;transl_table=11 CP098602.1 Genbank gene 3161120 3161758 . + . ID=gene-NDY24_14005;Name=NDY24_14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14005 CP098602.1 Protein Homology CDS 3161120 3161758 . + 0 ID=cds-UUE97035.1;Parent=gene-NDY24_14005;Dbxref=NCBI_GP:UUE97035.1;Name=UUE97035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117375.1;locus_tag=NDY24_14005;product=hypothetical protein;protein_id=UUE97035.1;transl_table=11 CP098602.1 Genbank gene 3161773 3162120 . + . ID=gene-NDY24_14010;Name=NDY24_14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14010 CP098602.1 Protein Homology CDS 3161773 3162120 . + 0 ID=cds-UUE97036.1;Parent=gene-NDY24_14010;Dbxref=NCBI_GP:UUE97036.1;Name=UUE97036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451552.1;locus_tag=NDY24_14010;product=hypothetical protein;protein_id=UUE97036.1;transl_table=11 CP098602.1 Genbank gene 3162284 3163249 . + . ID=gene-NDY24_14015;Name=NDY24_14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14015 CP098602.1 Protein Homology CDS 3162284 3163249 . + 0 ID=cds-UUE97037.1;Parent=gene-NDY24_14015;Dbxref=NCBI_GP:UUE97037.1;Name=UUE97037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451555.1;locus_tag=NDY24_14015;product=hypothetical protein;protein_id=UUE97037.1;transl_table=11 CP098602.1 Genbank gene 3163358 3163648 . + . ID=gene-NDY24_14020;Name=NDY24_14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14020 CP098602.1 Protein Homology CDS 3163358 3163648 . + 0 ID=cds-UUE97038.1;Parent=gene-NDY24_14020;Dbxref=NCBI_GP:UUE97038.1;Name=UUE97038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507646.1;locus_tag=NDY24_14020;product=type I toxin-antitoxin system SymE family toxin;protein_id=UUE97038.1;transl_table=11 CP098602.1 Genbank pseudogene 3163735 3164351 . + . ID=gene-NDY24_14025;Name=NDY24_14025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_14025;pseudo=true CP098602.1 Protein Homology CDS 3163735 3164351 . + 0 ID=cds-NDY24_14025;Parent=gene-NDY24_14025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037067.1;locus_tag=NDY24_14025;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3164367 3164573 . + . ID=gene-NDY24_14030;Name=NDY24_14030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14030 CP098602.1 GeneMarkS-2+ CDS 3164367 3164573 . + 0 ID=cds-UUE97039.1;Parent=gene-NDY24_14030;Dbxref=NCBI_GP:UUE97039.1;Name=UUE97039.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_14030;product=hypothetical protein;protein_id=UUE97039.1;transl_table=11 CP098602.1 Genbank gene 3164594 3165091 . + . ID=gene-NDY24_14035;Name=NDY24_14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14035 CP098602.1 GeneMarkS-2+ CDS 3164594 3165091 . + 0 ID=cds-UUE97040.1;Parent=gene-NDY24_14035;Dbxref=NCBI_GP:UUE97040.1;Name=UUE97040.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_14035;product=hypothetical protein;protein_id=UUE97040.1;transl_table=11 CP098602.1 Genbank pseudogene 3165235 3166196 . - . ID=gene-NDY24_14040;Name=NDY24_14040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_14040;pseudo=true CP098602.1 Protein Homology CDS 3165235 3166196 . - 0 ID=cds-NDY24_14040;Parent=gene-NDY24_14040;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037261.1;locus_tag=NDY24_14040;product=IS1595 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3166447 3167426 . + . ID=gene-NDY24_14045;Name=NDY24_14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14045 CP098602.1 Protein Homology CDS 3166447 3167158 . + 0 ID=cds-UUE97041.1;Parent=gene-NDY24_14045;Dbxref=NCBI_GP:UUE97041.1;Name=UUE97041.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=NDY24_14045;product=IS5 family transposase;protein_id=UUE97041.1;transl_table=11 CP098602.1 Protein Homology CDS 3167158 3167426 . + 2 ID=cds-UUE97041.1;Parent=gene-NDY24_14045;Dbxref=NCBI_GP:UUE97041.1;Name=UUE97041.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=NDY24_14045;product=IS5 family transposase;protein_id=UUE97041.1;transl_table=11 CP098602.1 Genbank gene 3167562 3167816 . + . ID=gene-NDY24_14050;Name=NDY24_14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14050 CP098602.1 Protein Homology CDS 3167562 3167816 . + 0 ID=cds-UUE97042.1;Parent=gene-NDY24_14050;Dbxref=NCBI_GP:UUE97042.1;Name=UUE97042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903887.1;locus_tag=NDY24_14050;product=hypothetical protein;protein_id=UUE97042.1;transl_table=11 CP098602.1 Genbank gene 3168059 3169039 . - . ID=gene-NDY24_14055;Name=NDY24_14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14055 CP098602.1 Protein Homology CDS 3168059 3169039 . - 0 ID=cds-UUE97043.1;Parent=gene-NDY24_14055;Dbxref=NCBI_GP:UUE97043.1;Name=UUE97043.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=NDY24_14055;product=IS5 family transposase;protein_id=UUE97043.1;transl_table=11 CP098602.1 Genbank gene 3169043 3169903 . - . ID=gene-NDY24_14060;Name=NDY24_14060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14060 CP098602.1 Protein Homology CDS 3169043 3169903 . - 0 ID=cds-UUE97044.1;Parent=gene-NDY24_14060;Dbxref=NCBI_GP:UUE97044.1;Name=UUE97044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017914654.1;locus_tag=NDY24_14060;product=hypothetical protein;protein_id=UUE97044.1;transl_table=11 CP098602.1 Genbank gene 3169994 3170755 . + . ID=gene-NDY24_14065;Name=NDY24_14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14065 CP098602.1 Protein Homology CDS 3169994 3170755 . + 0 ID=cds-UUE97045.1;Parent=gene-NDY24_14065;Dbxref=NCBI_GP:UUE97045.1;Name=UUE97045.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=NDY24_14065;product=IS5 family transposase;protein_id=UUE97045.1;transl_table=11 CP098602.1 Genbank gene 3170828 3171088 . - . ID=gene-NDY24_14070;Name=NDY24_14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14070 CP098602.1 Protein Homology CDS 3170828 3171088 . - 0 ID=cds-UUE97046.1;Parent=gene-NDY24_14070;Dbxref=NCBI_GP:UUE97046.1;Name=UUE97046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452338.1;locus_tag=NDY24_14070;product=helix-turn-helix domain-containing protein;protein_id=UUE97046.1;transl_table=11 CP098602.1 Genbank gene 3171528 3173975 . + . ID=gene-NDY24_14075;Name=NDY24_14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14075 CP098602.1 Protein Homology CDS 3171528 3173975 . + 0 ID=cds-UUE97047.1;Parent=gene-NDY24_14075;Dbxref=NCBI_GP:UUE97047.1;Name=UUE97047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452337.1;locus_tag=NDY24_14075;product=TonB-dependent receptor;protein_id=UUE97047.1;transl_table=11 CP098602.1 Genbank gene 3174045 3176126 . + . ID=gene-NDY24_14080;Name=NDY24_14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14080 CP098602.1 Protein Homology CDS 3174045 3176126 . + 0 ID=cds-UUE97048.1;Parent=gene-NDY24_14080;Dbxref=NCBI_GP:UUE97048.1;Name=UUE97048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452336.1;locus_tag=NDY24_14080;product=Atxe2 family lasso peptide isopeptidase;protein_id=UUE97048.1;transl_table=11 CP098602.1 Genbank gene 3176198 3177931 . - . ID=gene-NDY24_14085;Name=NDY24_14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14085 CP098602.1 Protein Homology CDS 3176198 3177931 . - 0 ID=cds-UUE97049.1;Parent=gene-NDY24_14085;Dbxref=NCBI_GP:UUE97049.1;Name=UUE97049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903882.1;locus_tag=NDY24_14085;product=lasso peptide isopeptide bond-forming cyclase;protein_id=UUE97049.1;transl_table=11 CP098602.1 Genbank gene 3177931 3178605 . - . ID=gene-NDY24_14090;Name=NDY24_14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14090 CP098602.1 Protein Homology CDS 3177931 3178605 . - 0 ID=cds-UUE97050.1;Parent=gene-NDY24_14090;Dbxref=NCBI_GP:UUE97050.1;Name=UUE97050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452334.1;locus_tag=NDY24_14090;product=lasso peptide biosynthesis B2 protein;protein_id=UUE97050.1;transl_table=11 CP098602.1 Genbank gene 3178716 3178862 . - . ID=gene-NDY24_14095;Name=NDY24_14095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14095 CP098602.1 Protein Homology CDS 3178716 3178862 . - 0 ID=cds-UUE97051.1;Parent=gene-NDY24_14095;Dbxref=NCBI_GP:UUE97051.1;Name=UUE97051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903880.1;locus_tag=NDY24_14095;product=benenodin family lasso peptide;protein_id=UUE97051.1;transl_table=11 CP098602.1 Genbank gene 3178911 3179051 . - . ID=gene-NDY24_14100;Name=NDY24_14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14100 CP098602.1 Protein Homology CDS 3178911 3179051 . - 0 ID=cds-UUE97052.1;Parent=gene-NDY24_14100;Dbxref=NCBI_GP:UUE97052.1;Name=UUE97052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903879.1;locus_tag=NDY24_14100;product=lasso peptide xanthomonin 1;protein_id=UUE97052.1;transl_table=11 CP098602.1 Genbank gene 3179219 3179848 . - . ID=gene-NDY24_14105;Name=NDY24_14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14105 CP098602.1 Protein Homology CDS 3179219 3179848 . - 0 ID=cds-UUE97053.1;Parent=gene-NDY24_14105;Dbxref=NCBI_GP:UUE97053.1;Name=UUE97053.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452331.1;locus_tag=NDY24_14105;product=GntR family transcriptional regulator;protein_id=UUE97053.1;transl_table=11 CP098602.1 Genbank gene 3180041 3181627 . - . ID=gene-NDY24_14110;Name=NDY24_14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14110 CP098602.1 Protein Homology CDS 3180041 3181627 . - 0 ID=cds-UUE97054.1;Parent=gene-NDY24_14110;Dbxref=NCBI_GP:UUE97054.1;Name=UUE97054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005923743.1;locus_tag=NDY24_14110;product=SDR family oxidoreductase;protein_id=UUE97054.1;transl_table=11 CP098602.1 Genbank gene 3182677 3183423 . + . ID=gene-NDY24_14115;Name=NDY24_14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14115 CP098602.1 GeneMarkS-2+ CDS 3182677 3183423 . + 0 ID=cds-UUE97055.1;Parent=gene-NDY24_14115;Dbxref=NCBI_GP:UUE97055.1;Name=UUE97055.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_14115;product=hypothetical protein;protein_id=UUE97055.1;transl_table=11 CP098602.1 Genbank gene 3183874 3184848 . + . ID=gene-NDY24_14120;Name=NDY24_14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14120 CP098602.1 Protein Homology CDS 3183874 3184848 . + 0 ID=cds-UUE97056.1;Parent=gene-NDY24_14120;Dbxref=NCBI_GP:UUE97056.1;Name=UUE97056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089267.1;locus_tag=NDY24_14120;product=glutathione S-transferase family protein;protein_id=UUE97056.1;transl_table=11 CP098602.1 Genbank gene 3184938 3185399 . - . ID=gene-NDY24_14125;Name=NDY24_14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14125 CP098602.1 Protein Homology CDS 3184938 3185399 . - 0 ID=cds-UUE97057.1;Parent=gene-NDY24_14125;Dbxref=NCBI_GP:UUE97057.1;Name=UUE97057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972686.1;locus_tag=NDY24_14125;product=DUF4126 family protein;protein_id=UUE97057.1;transl_table=11 CP098602.1 Genbank gene 3185721 3186650 . - . ID=gene-NDY24_14130;Name=NDY24_14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14130 CP098602.1 Protein Homology CDS 3185721 3186650 . - 0 ID=cds-UUE97058.1;Parent=gene-NDY24_14130;Dbxref=NCBI_GP:UUE97058.1;Name=UUE97058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005992961.1;locus_tag=NDY24_14130;product=CPBP family intramembrane metalloprotease;protein_id=UUE97058.1;transl_table=11 CP098602.1 Genbank gene 3186840 3187160 . - . ID=gene-NDY24_14135;Name=NDY24_14135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14135 CP098602.1 Protein Homology CDS 3186840 3187160 . - 0 ID=cds-UUE97059.1;Parent=gene-NDY24_14135;Dbxref=NCBI_GP:UUE97059.1;Name=UUE97059.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024212.2;locus_tag=NDY24_14135;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=UUE97059.1;transl_table=11 CP098602.1 Genbank pseudogene 3187247 3187357 . - . ID=gene-NDY24_14140;Name=NDY24_14140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_14140;pseudo=true CP098602.1 Protein Homology CDS 3187247 3187357 . - 0 ID=cds-NDY24_14140;Parent=gene-NDY24_14140;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016944765.1;locus_tag=NDY24_14140;product=alpha/beta hydrolase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3187508 3187843 . + . ID=gene-NDY24_14145;Name=NDY24_14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14145 CP098602.1 Protein Homology CDS 3187508 3187843 . + 0 ID=cds-UUE97060.1;Parent=gene-NDY24_14145;Dbxref=NCBI_GP:UUE97060.1;Name=UUE97060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509089.1;locus_tag=NDY24_14145;product=DUF3817 domain-containing protein;protein_id=UUE97060.1;transl_table=11 CP098602.1 Genbank gene 3187994 3189964 . + . ID=gene-NDY24_14150;Name=NDY24_14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14150 CP098602.1 Protein Homology CDS 3187994 3189964 . + 0 ID=cds-UUE97061.1;Parent=gene-NDY24_14150;Dbxref=NCBI_GP:UUE97061.1;Name=UUE97061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452322.1;locus_tag=NDY24_14150;product=S9 family peptidase;protein_id=UUE97061.1;transl_table=11 CP098602.1 Genbank gene 3190219 3192543 . - . ID=gene-NDY24_14155;Name=NDY24_14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14155 CP098602.1 Protein Homology CDS 3190219 3192543 . - 0 ID=cds-UUE97062.1;Parent=gene-NDY24_14155;Dbxref=NCBI_GP:UUE97062.1;Name=UUE97062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117187.1;locus_tag=NDY24_14155;product=S9 family peptidase;protein_id=UUE97062.1;transl_table=11 CP098602.1 Genbank gene 3192719 3193810 . - . ID=gene-NDY24_14160;Name=NDY24_14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14160 CP098602.1 Protein Homology CDS 3192719 3193810 . - 0 ID=cds-UUE97063.1;Parent=gene-NDY24_14160;Dbxref=NCBI_GP:UUE97063.1;Name=UUE97063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915468.1;locus_tag=NDY24_14160;product=DUF1615 domain-containing protein;protein_id=UUE97063.1;transl_table=11 CP098602.1 Genbank gene 3194203 3196107 . + . ID=gene-NDY24_14165;Name=NDY24_14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14165 CP098602.1 Protein Homology CDS 3194203 3196107 . + 0 ID=cds-UUE97064.1;Parent=gene-NDY24_14165;Dbxref=NCBI_GP:UUE97064.1;Name=UUE97064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005923732.1;locus_tag=NDY24_14165;product=GGDEF domain-containing protein;protein_id=UUE97064.1;transl_table=11 CP098602.1 Genbank gene 3196345 3196890 . - . ID=gene-NDY24_14170;Name=NDY24_14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14170 CP098602.1 Protein Homology CDS 3196345 3196890 . - 0 ID=cds-UUE97065.1;Parent=gene-NDY24_14170;Dbxref=NCBI_GP:UUE97065.1;Name=UUE97065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452317.1;locus_tag=NDY24_14170;product=hypothetical protein;protein_id=UUE97065.1;transl_table=11 CP098602.1 Genbank gene 3197241 3197549 . + . ID=gene-NDY24_14175;Name=NDY24_14175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14175 CP098602.1 Protein Homology CDS 3197241 3197549 . + 0 ID=cds-UUE97066.1;Parent=gene-NDY24_14175;Dbxref=NCBI_GP:UUE97066.1;Name=UUE97066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452316.1;locus_tag=NDY24_14175;product=hypothetical protein;protein_id=UUE97066.1;transl_table=11 CP098602.1 Genbank gene 3197757 3198308 . - . ID=gene-NDY24_14180;Name=NDY24_14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14180 CP098602.1 Protein Homology CDS 3197757 3198308 . - 0 ID=cds-UUE97067.1;Parent=gene-NDY24_14180;Dbxref=NCBI_GP:UUE97067.1;Name=UUE97067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448615.1;locus_tag=NDY24_14180;product=hypothetical protein;protein_id=UUE97067.1;transl_table=11 CP098602.1 Genbank gene 3198433 3199284 . - . ID=gene-NDY24_14185;Name=NDY24_14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14185 CP098602.1 Protein Homology CDS 3198433 3199284 . - 0 ID=cds-UUE97068.1;Parent=gene-NDY24_14185;Dbxref=NCBI_GP:UUE97068.1;Name=UUE97068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089279.1;locus_tag=NDY24_14185;product=SAM-dependent methyltransferase;protein_id=UUE97068.1;transl_table=11 CP098602.1 Genbank gene 3199510 3200385 . + . ID=gene-NDY24_14190;Name=NDY24_14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14190 CP098602.1 Protein Homology CDS 3199510 3200385 . + 0 ID=cds-UUE97069.1;Parent=gene-NDY24_14190;Dbxref=NCBI_GP:UUE97069.1;Name=UUE97069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159126.1;locus_tag=NDY24_14190;product=DMT family transporter;protein_id=UUE97069.1;transl_table=11 CP098602.1 Genbank gene 3200515 3201309 . - . ID=gene-NDY24_14195;Name=NDY24_14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14195 CP098602.1 Protein Homology CDS 3200515 3201309 . - 0 ID=cds-UUE97070.1;Parent=gene-NDY24_14195;Dbxref=NCBI_GP:UUE97070.1;Name=UUE97070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448612.1;locus_tag=NDY24_14195;product=transporter substrate-binding domain-containing protein;protein_id=UUE97070.1;transl_table=11 CP098602.1 Genbank gene 3201483 3201698 . + . ID=gene-NDY24_14200;Name=NDY24_14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14200 CP098602.1 Protein Homology CDS 3201483 3201698 . + 0 ID=cds-UUE97071.1;Parent=gene-NDY24_14200;Dbxref=NCBI_GP:UUE97071.1;Name=UUE97071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376103.1;locus_tag=NDY24_14200;product=hypothetical protein;protein_id=UUE97071.1;transl_table=11 CP098602.1 Genbank pseudogene 3201743 3203514 . - . ID=gene-NDY24_14205;Name=NDY24_14205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_14205;pseudo=true CP098602.1 Protein Homology CDS 3201743 3203514 . - 0 ID=cds-NDY24_14205;Parent=gene-NDY24_14205;Note=frameshifted;Ontology_term=GO:0071704,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501805.1;locus_tag=NDY24_14205;product=cellulase family glycosylhydrolase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3203894 3205270 . + . ID=gene-NDY24_14210;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=NDY24_14210 CP098602.1 Protein Homology CDS 3203894 3205270 . + 0 ID=cds-UUE97072.1;Parent=gene-NDY24_14210;Dbxref=NCBI_GP:UUE97072.1;Name=UUE97072.1;Ontology_term=GO:0006865,GO:0055085,GO:0016021;gbkey=CDS;gene=cycA;go_component=integral component of membrane|0016021||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448608.1;locus_tag=NDY24_14210;product=D-serine/D-alanine/glycine transporter;protein_id=UUE97072.1;transl_table=11 CP098602.1 Genbank gene 3205448 3206359 . + . ID=gene-NDY24_14215;Name=NDY24_14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14215 CP098602.1 Protein Homology CDS 3205448 3206359 . + 0 ID=cds-UUE97073.1;Parent=gene-NDY24_14215;Dbxref=NCBI_GP:UUE97073.1;Name=UUE97073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501814.1;locus_tag=NDY24_14215;product=magnesium transporter;protein_id=UUE97073.1;transl_table=11 CP098602.1 Genbank gene 3206563 3207258 . - . ID=gene-NDY24_14220;Name=NDY24_14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14220 CP098602.1 Protein Homology CDS 3206563 3207258 . - 0 ID=cds-UUE97074.1;Parent=gene-NDY24_14220;Dbxref=NCBI_GP:UUE97074.1;Name=UUE97074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448601.1;locus_tag=NDY24_14220;product=AIM24 family protein;protein_id=UUE97074.1;transl_table=11 CP098602.1 Genbank gene 3207551 3208510 . + . ID=gene-NDY24_14225;Name=NDY24_14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14225 CP098602.1 Protein Homology CDS 3207551 3208510 . + 0 ID=cds-UUE97075.1;Parent=gene-NDY24_14225;Dbxref=NCBI_GP:UUE97075.1;Name=UUE97075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448598.1;locus_tag=NDY24_14225;product=arabinan endo-1%2C5-alpha-L-arabinosidase;protein_id=UUE97075.1;transl_table=11 CP098602.1 Genbank gene 3208658 3210331 . - . ID=gene-NDY24_14230;Name=treA;gbkey=Gene;gene=treA;gene_biotype=protein_coding;locus_tag=NDY24_14230 CP098602.1 Protein Homology CDS 3208658 3210331 . - 0 ID=cds-UUE97076.1;Parent=gene-NDY24_14230;Dbxref=NCBI_GP:UUE97076.1;Name=UUE97076.1;gbkey=CDS;gene=treA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167145.1;locus_tag=NDY24_14230;product=alpha%2Calpha-trehalase TreA;protein_id=UUE97076.1;transl_table=11 CP098602.1 Genbank gene 3210776 3211552 . - . ID=gene-NDY24_14235;Name=NDY24_14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14235 CP098602.1 Protein Homology CDS 3210776 3211552 . - 0 ID=cds-UUE97077.1;Parent=gene-NDY24_14235;Dbxref=NCBI_GP:UUE97077.1;Name=UUE97077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448594.1;locus_tag=NDY24_14235;product=DUF72 domain-containing protein;protein_id=UUE97077.1;transl_table=11 CP098602.1 Genbank gene 3211660 3212412 . + . ID=gene-NDY24_14240;Name=NDY24_14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14240 CP098602.1 Protein Homology CDS 3211660 3212412 . + 0 ID=cds-UUE97078.1;Parent=gene-NDY24_14240;Dbxref=NCBI_GP:UUE97078.1;Name=UUE97078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448592.1;locus_tag=NDY24_14240;product=endonuclease;protein_id=UUE97078.1;transl_table=11 CP098602.1 Genbank gene 3212563 3213582 . + . ID=gene-NDY24_14245;Name=NDY24_14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14245 CP098602.1 Protein Homology CDS 3212563 3213582 . + 0 ID=cds-UUE97079.1;Parent=gene-NDY24_14245;Dbxref=NCBI_GP:UUE97079.1;Name=UUE97079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376082.1;locus_tag=NDY24_14245;product=hypothetical protein;protein_id=UUE97079.1;transl_table=11 CP098602.1 Genbank gene 3214518 3215432 . - . ID=gene-NDY24_14250;Name=NDY24_14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14250 CP098602.1 Protein Homology CDS 3214518 3215432 . - 0 ID=cds-UUE97080.1;Parent=gene-NDY24_14250;Dbxref=NCBI_GP:UUE97080.1;Name=UUE97080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368328.1;locus_tag=NDY24_14250;product=GAF domain-containing protein;protein_id=UUE97080.1;transl_table=11 CP098602.1 Genbank gene 3215511 3215765 . + . ID=gene-NDY24_14255;Name=NDY24_14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14255 CP098602.1 GeneMarkS-2+ CDS 3215511 3215765 . + 0 ID=cds-UUE97081.1;Parent=gene-NDY24_14255;Dbxref=NCBI_GP:UUE97081.1;Name=UUE97081.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_14255;product=hypothetical protein;protein_id=UUE97081.1;transl_table=11 CP098602.1 Genbank gene 3215910 3218789 . - . ID=gene-NDY24_14260;Name=NDY24_14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14260 CP098602.1 Protein Homology CDS 3215910 3218789 . - 0 ID=cds-UUE97082.1;Parent=gene-NDY24_14260;Dbxref=NCBI_GP:UUE97082.1;Name=UUE97082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509061.1;locus_tag=NDY24_14260;product=insulinase family protein;protein_id=UUE97082.1;transl_table=11 CP098602.1 Genbank gene 3218952 3221615 . + . ID=gene-NDY24_14265;Name=NDY24_14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14265 CP098602.1 Protein Homology CDS 3218952 3221615 . + 0 ID=cds-UUE97083.1;Parent=gene-NDY24_14265;Dbxref=NCBI_GP:UUE97083.1;Name=UUE97083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453270.1;locus_tag=NDY24_14265;product=PAS domain S-box protein;protein_id=UUE97083.1;transl_table=11 CP098602.1 Genbank gene 3222413 3224542 . - . ID=gene-NDY24_14270;Name=NDY24_14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14270 CP098602.1 Protein Homology CDS 3222413 3224542 . - 0 ID=cds-UUF00416.1;Parent=gene-NDY24_14270;Dbxref=NCBI_GP:UUF00416.1;Name=UUF00416.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118448.1;locus_tag=NDY24_14270;product=methyl-accepting chemotaxis protein;protein_id=UUF00416.1;transl_table=11 CP098602.1 Genbank gene 3224890 3226338 . - . ID=gene-NDY24_14275;Name=NDY24_14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14275 CP098602.1 Protein Homology CDS 3224890 3226338 . - 0 ID=cds-UUE97084.1;Parent=gene-NDY24_14275;Dbxref=NCBI_GP:UUE97084.1;Name=UUE97084.1;Ontology_term=GO:0071704,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038613.1;locus_tag=NDY24_14275;product=cellulase family glycosylhydrolase;protein_id=UUE97084.1;transl_table=11 CP098602.1 Genbank gene 3226541 3228025 . + . ID=gene-NDY24_14280;Name=NDY24_14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14280 CP098602.1 Protein Homology CDS 3226541 3228025 . + 0 ID=cds-UUE97085.1;Parent=gene-NDY24_14280;Dbxref=NCBI_GP:UUE97085.1;Name=UUE97085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116599.1;locus_tag=NDY24_14280;product=SulP family inorganic anion transporter;protein_id=UUE97085.1;transl_table=11 CP098602.1 Genbank gene 3228290 3229273 . + . ID=gene-NDY24_14285;Name=NDY24_14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14285 CP098602.1 Protein Homology CDS 3228290 3229273 . + 0 ID=cds-UUE97086.1;Parent=gene-NDY24_14285;Dbxref=NCBI_GP:UUE97086.1;Name=UUE97086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015462838.1;locus_tag=NDY24_14285;product=GGDEF domain-containing protein;protein_id=UUE97086.1;transl_table=11 CP098602.1 Genbank gene 3229448 3231097 . + . ID=gene-NDY24_14290;Name=NDY24_14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14290 CP098602.1 Protein Homology CDS 3229448 3231097 . + 0 ID=cds-UUF00417.1;Parent=gene-NDY24_14290;Dbxref=NCBI_GP:UUF00417.1;Name=UUF00417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489719.1;locus_tag=NDY24_14290;product=M28 family metallopeptidase;protein_id=UUF00417.1;transl_table=11 CP098602.1 Genbank gene 3231637 3231777 . + . ID=gene-NDY24_14295;Name=NDY24_14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14295 CP098602.1 GeneMarkS-2+ CDS 3231637 3231777 . + 0 ID=cds-UUE97087.1;Parent=gene-NDY24_14295;Dbxref=NCBI_GP:UUE97087.1;Name=UUE97087.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_14295;product=hypothetical protein;protein_id=UUE97087.1;transl_table=11 CP098602.1 Genbank gene 3232106 3234043 . + . ID=gene-NDY24_14300;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=NDY24_14300 CP098602.1 Protein Homology CDS 3232106 3234043 . + 0 ID=cds-UUE97088.1;Parent=gene-NDY24_14300;Dbxref=NCBI_GP:UUE97088.1;Name=UUE97088.1;gbkey=CDS;gene=mdoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915513.1;locus_tag=NDY24_14300;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=UUE97088.1;transl_table=11 CP098602.1 Genbank gene 3234203 3234868 . + . ID=gene-NDY24_14305;Name=NDY24_14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14305 CP098602.1 Protein Homology CDS 3234203 3234868 . + 0 ID=cds-UUE97089.1;Parent=gene-NDY24_14305;Dbxref=NCBI_GP:UUE97089.1;Name=UUE97089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376058.1;locus_tag=NDY24_14305;product=alpha/beta hydrolase;protein_id=UUE97089.1;transl_table=11 CP098602.1 Genbank gene 3234873 3235925 . + . ID=gene-NDY24_14310;Name=NDY24_14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14310 CP098602.1 Protein Homology CDS 3234873 3235925 . + 0 ID=cds-UUE97090.1;Parent=gene-NDY24_14310;Dbxref=NCBI_GP:UUE97090.1;Name=UUE97090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409486.1;locus_tag=NDY24_14310;product=sensor histidine kinase;protein_id=UUE97090.1;transl_table=11 CP098602.1 Genbank gene 3235956 3236687 . + . ID=gene-NDY24_14315;Name=NDY24_14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14315 CP098602.1 Protein Homology CDS 3235956 3236687 . + 0 ID=cds-UUE97091.1;Parent=gene-NDY24_14315;Dbxref=NCBI_GP:UUE97091.1;Name=UUE97091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451604.1;locus_tag=NDY24_14315;product=LytTR family DNA-binding domain-containing protein;protein_id=UUE97091.1;transl_table=11 CP098602.1 Genbank gene 3236847 3237761 . + . ID=gene-NDY24_14320;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=NDY24_14320 CP098602.1 Protein Homology CDS 3236847 3237761 . + 0 ID=cds-UUE97092.1;Parent=gene-NDY24_14320;Dbxref=NCBI_GP:UUE97092.1;Name=UUE97092.1;Ontology_term=GO:0006779,GO:0004418,GO:0005737;gbkey=CDS;gene=hemC;go_component=cytoplasm|0005737||IEA;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155437.1;locus_tag=NDY24_14320;product=hydroxymethylbilane synthase;protein_id=UUE97092.1;transl_table=11 CP098602.1 Genbank gene 3237959 3238759 . - . ID=gene-NDY24_14325;Name=NDY24_14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14325 CP098602.1 Protein Homology CDS 3237959 3238759 . - 0 ID=cds-UUE97093.1;Parent=gene-NDY24_14325;Dbxref=NCBI_GP:UUE97093.1;Name=UUE97093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302001.1;locus_tag=NDY24_14325;product=DUF481 domain-containing protein;protein_id=UUE97093.1;transl_table=11 CP098602.1 Genbank gene 3239208 3240173 . + . ID=gene-NDY24_14330;Name=NDY24_14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14330 CP098602.1 Protein Homology CDS 3239208 3240173 . + 0 ID=cds-UUE97094.1;Parent=gene-NDY24_14330;Dbxref=NCBI_GP:UUE97094.1;Name=UUE97094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451607.1;locus_tag=NDY24_14330;product=YafY family transcriptional regulator;protein_id=UUE97094.1;transl_table=11 CP098602.1 Genbank gene 3240252 3240821 . - . ID=gene-NDY24_14335;Name=NDY24_14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14335 CP098602.1 Protein Homology CDS 3240252 3240821 . - 0 ID=cds-UUE97095.1;Parent=gene-NDY24_14335;Dbxref=NCBI_GP:UUE97095.1;Name=UUE97095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368302.1;locus_tag=NDY24_14335;product=lipocalin family protein;protein_id=UUE97095.1;transl_table=11 CP098602.1 Genbank gene 3241067 3241378 . + . ID=gene-NDY24_14340;Name=NDY24_14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14340 CP098602.1 Protein Homology CDS 3241067 3241378 . + 0 ID=cds-UUE97096.1;Parent=gene-NDY24_14340;Dbxref=NCBI_GP:UUE97096.1;Name=UUE97096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368301.1;locus_tag=NDY24_14340;product=hypothetical protein;protein_id=UUE97096.1;transl_table=11 CP098602.1 Genbank gene 3241450 3243543 . + . ID=gene-NDY24_14345;Name=NDY24_14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14345 CP098602.1 Protein Homology CDS 3241450 3243543 . + 0 ID=cds-UUE97097.1;Parent=gene-NDY24_14345;Dbxref=NCBI_GP:UUE97097.1;Name=UUE97097.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903637.1;locus_tag=NDY24_14345;product=prolyl oligopeptidase family serine peptidase;protein_id=UUE97097.1;transl_table=11 CP098602.1 Genbank gene 3244166 3245350 . - . ID=gene-NDY24_14350;Name=NDY24_14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14350 CP098602.1 Protein Homology CDS 3244166 3245350 . - 0 ID=cds-UUE97098.1;Parent=gene-NDY24_14350;Dbxref=NCBI_GP:UUE97098.1;Name=UUE97098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155429.1;locus_tag=NDY24_14350;product=pyridoxal phosphate-dependent aminotransferase;protein_id=UUE97098.1;transl_table=11 CP098602.1 Genbank pseudogene 3245688 3247828 . + . ID=gene-NDY24_14355;Name=NDY24_14355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_14355;pseudo=true CP098602.1 Protein Homology CDS 3245688 3247828 . + 0 ID=cds-NDY24_14355;Parent=gene-NDY24_14355;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437330.1;locus_tag=NDY24_14355;product=S9 family peptidase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3247989 3248387 . + . ID=gene-NDY24_14360;Name=NDY24_14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14360 CP098602.1 Protein Homology CDS 3247989 3248387 . + 0 ID=cds-UUE97099.1;Parent=gene-NDY24_14360;Dbxref=NCBI_GP:UUE97099.1;Name=UUE97099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451313.1;locus_tag=NDY24_14360;product=YbaN family protein;protein_id=UUE97099.1;transl_table=11 CP098602.1 Genbank gene 3248427 3248681 . + . ID=gene-NDY24_14365;Name=NDY24_14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14365 CP098602.1 Protein Homology CDS 3248427 3248681 . + 0 ID=cds-UUE97100.1;Parent=gene-NDY24_14365;Dbxref=NCBI_GP:UUE97100.1;Name=UUE97100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155427.1;locus_tag=NDY24_14365;product=lipoprotein;protein_id=UUE97100.1;transl_table=11 CP098602.1 Genbank gene 3248671 3249522 . + . ID=gene-NDY24_14370;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=NDY24_14370 CP098602.1 Protein Homology CDS 3248671 3249522 . + 0 ID=cds-UUE97101.1;Parent=gene-NDY24_14370;Dbxref=NCBI_GP:UUE97101.1;Name=UUE97101.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903631.1;locus_tag=NDY24_14370;product=diaminopimelate epimerase;protein_id=UUE97101.1;transl_table=11 CP098602.1 Genbank gene 3249522 3250193 . + . ID=gene-NDY24_14375;Name=NDY24_14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14375 CP098602.1 Protein Homology CDS 3249522 3250193 . + 0 ID=cds-UUE97102.1;Parent=gene-NDY24_14375;Dbxref=NCBI_GP:UUE97102.1;Name=UUE97102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155425.1;locus_tag=NDY24_14375;product=DUF484 family protein;protein_id=UUE97102.1;transl_table=11 CP098602.1 Genbank gene 3250273 3251190 . + . ID=gene-NDY24_14380;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=NDY24_14380 CP098602.1 Protein Homology CDS 3250273 3251190 . + 0 ID=cds-UUE97103.1;Parent=gene-NDY24_14380;Dbxref=NCBI_GP:UUE97103.1;Name=UUE97103.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerC;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017173863.1;locus_tag=NDY24_14380;product=tyrosine recombinase XerC;protein_id=UUE97103.1;transl_table=11 CP098602.1 Genbank gene 3251572 3252123 . + . ID=gene-NDY24_14385;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=NDY24_14385 CP098602.1 Protein Homology CDS 3251572 3252123 . + 0 ID=cds-UUE97104.1;Parent=gene-NDY24_14385;Dbxref=NCBI_GP:UUE97104.1;Name=UUE97104.1;Ontology_term=GO:0051603,GO:0004298;gbkey=CDS;gene=hslV;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in cellular protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260360.1;locus_tag=NDY24_14385;product=ATP-dependent protease subunit HslV;protein_id=UUE97104.1;transl_table=11 CP098602.1 Genbank gene 3252233 3253600 . + . ID=gene-NDY24_14390;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=NDY24_14390 CP098602.1 Protein Homology CDS 3252233 3253600 . + 0 ID=cds-UUE97105.1;Parent=gene-NDY24_14390;Dbxref=NCBI_GP:UUE97105.1;Name=UUE97105.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887;gbkey=CDS;gene=hslU;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804707.1;locus_tag=NDY24_14390;product=ATP-dependent protease ATPase subunit HslU;protein_id=UUE97105.1;transl_table=11 CP098602.1 Genbank gene 3253742 3254188 . - . ID=gene-NDY24_14395;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=NDY24_14395 CP098602.1 Protein Homology CDS 3253742 3254188 . - 0 ID=cds-UUE97106.1;Parent=gene-NDY24_14395;Dbxref=NCBI_GP:UUE97106.1;Name=UUE97106.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpC;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451320.1;locus_tag=NDY24_14395;product=ATP synthase F1 subunit epsilon;protein_id=UUE97106.1;transl_table=11 CP098602.1 Genbank gene 3254357 3254812 . - . ID=gene-NDY24_14400;Name=NDY24_14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14400 CP098602.1 Protein Homology CDS 3254357 3254812 . - 0 ID=cds-UUE97107.1;Parent=gene-NDY24_14400;Dbxref=NCBI_GP:UUE97107.1;Name=UUE97107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346314.1;locus_tag=NDY24_14400;product=nucleoside deaminase;protein_id=UUE97107.1;transl_table=11 CP098602.1 Genbank gene 3254809 3255315 . - . ID=gene-NDY24_14405;Name=NDY24_14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14405 CP098602.1 Protein Homology CDS 3254809 3255315 . - 0 ID=cds-UUE97108.1;Parent=gene-NDY24_14405;Dbxref=NCBI_GP:UUE97108.1;Name=UUE97108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451322.1;locus_tag=NDY24_14405;product=GNAT family N-acetyltransferase;protein_id=UUE97108.1;transl_table=11 CP098602.1 Genbank gene 3255793 3256881 . - . ID=gene-NDY24_14410;Name=NDY24_14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14410 CP098602.1 Protein Homology CDS 3255793 3256881 . - 0 ID=cds-UUE97109.1;Parent=gene-NDY24_14410;Dbxref=NCBI_GP:UUE97109.1;Name=UUE97109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482758.1;locus_tag=NDY24_14410;product=HlyD family secretion protein;protein_id=UUE97109.1;transl_table=11 CP098602.1 Genbank gene 3256878 3258527 . - . ID=gene-NDY24_14415;Name=NDY24_14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14415 CP098602.1 Protein Homology CDS 3256878 3258527 . - 0 ID=cds-UUE97110.1;Parent=gene-NDY24_14415;Dbxref=NCBI_GP:UUE97110.1;Name=UUE97110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038582.1;locus_tag=NDY24_14415;product=MFS transporter;protein_id=UUE97110.1;transl_table=11 CP098602.1 Genbank gene 3258616 3259377 . + . ID=gene-NDY24_14420;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=NDY24_14420 CP098602.1 Protein Homology CDS 3258616 3259377 . + 0 ID=cds-UUE97111.1;Parent=gene-NDY24_14420;Dbxref=NCBI_GP:UUE97111.1;Name=UUE97111.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303204.1;locus_tag=NDY24_14420;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=UUE97111.1;transl_table=11 CP098602.1 Genbank gene 3259580 3260470 . + . ID=gene-NDY24_14425;Name=NDY24_14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14425 CP098602.1 Protein Homology CDS 3259580 3260470 . + 0 ID=cds-UUE97112.1;Parent=gene-NDY24_14425;Dbxref=NCBI_GP:UUE97112.1;Name=UUE97112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302598.1;locus_tag=NDY24_14425;product=GGDEF domain-containing protein;protein_id=UUE97112.1;transl_table=11 CP098602.1 Genbank gene 3260546 3262501 . + . ID=gene-NDY24_14430;Name=NDY24_14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14430 CP098602.1 Protein Homology CDS 3260546 3262501 . + 0 ID=cds-UUE97113.1;Parent=gene-NDY24_14430;Dbxref=NCBI_GP:UUE97113.1;Name=UUE97113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904589.1;locus_tag=NDY24_14430;product=M1 family metallopeptidase;protein_id=UUE97113.1;transl_table=11 CP098602.1 Genbank gene 3262678 3263397 . + . ID=gene-NDY24_14435;Name=NDY24_14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14435 CP098602.1 Protein Homology CDS 3262678 3263397 . + 0 ID=cds-UUE97114.1;Parent=gene-NDY24_14435;Dbxref=NCBI_GP:UUE97114.1;Name=UUE97114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804719.1;locus_tag=NDY24_14435;product=hypothetical protein;protein_id=UUE97114.1;transl_table=11 CP098602.1 Genbank gene 3263556 3264197 . + . ID=gene-NDY24_14440;Name=NDY24_14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14440 CP098602.1 Protein Homology CDS 3263556 3264197 . + 0 ID=cds-UUE97115.1;Parent=gene-NDY24_14440;Dbxref=NCBI_GP:UUE97115.1;Name=UUE97115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112913.1;locus_tag=NDY24_14440;product=HAD family hydrolase;protein_id=UUE97115.1;transl_table=11 CP098602.1 Genbank gene 3265239 3267212 . + . ID=gene-NDY24_14445;Name=NDY24_14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14445 CP098602.1 Protein Homology CDS 3265239 3267212 . + 0 ID=cds-UUE97116.1;Parent=gene-NDY24_14445;Dbxref=NCBI_GP:UUE97116.1;Name=UUE97116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008577293.1;locus_tag=NDY24_14445;product=methanol/ethanol family PQQ-dependent dehydrogenase;protein_id=UUE97116.1;transl_table=11 CP098602.1 Genbank gene 3267209 3268987 . + . ID=gene-NDY24_14450;Name=NDY24_14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14450 CP098602.1 Protein Homology CDS 3267209 3268987 . + 0 ID=cds-UUE97117.1;Parent=gene-NDY24_14450;Dbxref=NCBI_GP:UUE97117.1;Name=UUE97117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155411.1;locus_tag=NDY24_14450;product=quinoprotein dehydrogenase-associated putative ABC transporter substrate-binding protein;protein_id=UUE97117.1;transl_table=11 CP098602.1 Genbank pseudogene 3269025 3269677 . + . ID=gene-NDY24_14455;Name=NDY24_14455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_14455;pseudo=true CP098602.1 Protein Homology CDS 3269025 3269677 . + 0 ID=cds-NDY24_14455;Parent=gene-NDY24_14455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155410.1;locus_tag=NDY24_14455;product=cytochrome c;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3269674 3270747 . + . ID=gene-NDY24_14460;Name=NDY24_14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14460 CP098602.1 Protein Homology CDS 3269674 3270747 . + 0 ID=cds-UUE97118.1;Parent=gene-NDY24_14460;Dbxref=NCBI_GP:UUE97118.1;Name=UUE97118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904615.1;locus_tag=NDY24_14460;product=beta-propeller fold lactonase family protein;protein_id=UUE97118.1;transl_table=11 CP098602.1 Genbank gene 3270783 3271889 . + . ID=gene-NDY24_14465;Name=NDY24_14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14465 CP098602.1 Protein Homology CDS 3270783 3271889 . + 0 ID=cds-UUE97119.1;Parent=gene-NDY24_14465;Dbxref=NCBI_GP:UUE97119.1;Name=UUE97119.1;Ontology_term=GO:0006113,GO:0009404,GO:0004024,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase activity%2C zinc-dependent|0004024||IEA,S-(hydroxymethyl)glutathione dehydrogenase activity|0051903||IEA;go_process=fermentation|0006113||IEA,toxin metabolic process|0009404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000842106.1;locus_tag=NDY24_14465;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=UUE97119.1;transl_table=11 CP098602.1 Genbank gene 3272041 3274332 . + . ID=gene-NDY24_14470;Name=NDY24_14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14470 CP098602.1 Protein Homology CDS 3272041 3274332 . + 0 ID=cds-UUF00418.1;Parent=gene-NDY24_14470;Dbxref=NCBI_GP:UUF00418.1;Name=UUF00418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450050.1;locus_tag=NDY24_14470;product=TonB-dependent receptor;protein_id=UUF00418.1;transl_table=11 CP098602.1 Genbank gene 3274403 3275089 . - . ID=gene-NDY24_14475;Name=NDY24_14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14475 CP098602.1 Protein Homology CDS 3274403 3275089 . - 0 ID=cds-UUE97120.1;Parent=gene-NDY24_14475;Dbxref=NCBI_GP:UUE97120.1;Name=UUE97120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368273.1;locus_tag=NDY24_14475;product=class I SAM-dependent methyltransferase;protein_id=UUE97120.1;transl_table=11 CP098602.1 Genbank gene 3275149 3275802 . - . ID=gene-NDY24_14480;Name=NDY24_14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14480 CP098602.1 GeneMarkS-2+ CDS 3275149 3275802 . - 0 ID=cds-UUE97121.1;Parent=gene-NDY24_14480;Dbxref=NCBI_GP:UUE97121.1;Name=UUE97121.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_14480;product=hypothetical protein;protein_id=UUE97121.1;transl_table=11 CP098602.1 Genbank gene 3275760 3276587 . - . ID=gene-NDY24_14485;Name=NDY24_14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14485 CP098602.1 Protein Homology CDS 3275760 3276587 . - 0 ID=cds-UUE97122.1;Parent=gene-NDY24_14485;Dbxref=NCBI_GP:UUE97122.1;Name=UUE97122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113604.1;locus_tag=NDY24_14485;product=hypothetical protein;protein_id=UUE97122.1;transl_table=11 CP098602.1 Genbank gene 3276569 3277405 . - . ID=gene-NDY24_14490;Name=NDY24_14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14490 CP098602.1 Protein Homology CDS 3276569 3277405 . - 0 ID=cds-UUE97123.1;Parent=gene-NDY24_14490;Dbxref=NCBI_GP:UUE97123.1;Name=UUE97123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118438.1;locus_tag=NDY24_14490;product=sulfite exporter TauE/SafE family protein;protein_id=UUE97123.1;transl_table=11 CP098602.1 Genbank gene 3277405 3278859 . - . ID=gene-NDY24_14495;Name=phnY;gbkey=Gene;gene=phnY;gene_biotype=protein_coding;locus_tag=NDY24_14495 CP098602.1 Protein Homology CDS 3277405 3278859 . - 0 ID=cds-UUE97124.1;Parent=gene-NDY24_14495;Dbxref=NCBI_GP:UUE97124.1;Name=UUE97124.1;gbkey=CDS;gene=phnY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368270.1;locus_tag=NDY24_14495;product=phosphonoacetaldehyde dehydrogenase;protein_id=UUE97124.1;transl_table=11 CP098602.1 Genbank gene 3278876 3280894 . - . ID=gene-NDY24_14500;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=NDY24_14500 CP098602.1 Protein Homology CDS 3278876 3280894 . - 0 ID=cds-UUE97125.1;Parent=gene-NDY24_14500;Dbxref=NCBI_GP:UUE97125.1;Name=UUE97125.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368268.1;locus_tag=NDY24_14500;product=asparagine synthase (glutamine-hydrolyzing);protein_id=UUE97125.1;transl_table=11 CP098602.1 Genbank gene 3280905 3281630 . - . ID=gene-NDY24_14505;Name=NDY24_14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14505 CP098602.1 Protein Homology CDS 3280905 3281630 . - 0 ID=cds-UUE97126.1;Parent=gene-NDY24_14505;Dbxref=NCBI_GP:UUE97126.1;Name=UUE97126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368267.1;locus_tag=NDY24_14505;product=NTP transferase domain-containing protein;protein_id=UUE97126.1;transl_table=11 CP098602.1 Genbank gene 3281627 3282580 . - . ID=gene-NDY24_14510;Name=NDY24_14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14510 CP098602.1 Protein Homology CDS 3281627 3282580 . - 0 ID=cds-UUE97127.1;Parent=gene-NDY24_14510;Dbxref=NCBI_GP:UUE97127.1;Name=UUE97127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368266.1;locus_tag=NDY24_14510;product=diiron oxygenase;protein_id=UUE97127.1;transl_table=11 CP098602.1 Genbank gene 3282577 3283458 . - . ID=gene-NDY24_14515;Name=NDY24_14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14515 CP098602.1 Protein Homology CDS 3282577 3283458 . - 0 ID=cds-UUE97128.1;Parent=gene-NDY24_14515;Dbxref=NCBI_GP:UUE97128.1;Name=UUE97128.1;Ontology_term=GO:0003824,GO:0030976;gbkey=CDS;go_function=catalytic activity|0003824||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: protein motif:HMM:NF014794.2;locus_tag=NDY24_14515;product=thiamine pyrophosphate-dependent enzyme;protein_id=UUE97128.1;transl_table=11 CP098602.1 Genbank gene 3283458 3283793 . - . ID=gene-NDY24_14520;Name=NDY24_14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14520 CP098602.1 Protein Homology CDS 3283458 3283793 . - 0 ID=cds-UUE97129.1;Parent=gene-NDY24_14520;Dbxref=NCBI_GP:UUE97129.1;Name=UUE97129.1;Ontology_term=GO:0030976;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: protein motif:HMM:NF014795.2;locus_tag=NDY24_14520;product=thiamine pyrophosphate-binding protein;protein_id=UUE97129.1;transl_table=11 CP098602.1 Genbank gene 3283790 3284755 . - . ID=gene-NDY24_14525;Name=aepX;gbkey=Gene;gene=aepX;gene_biotype=protein_coding;locus_tag=NDY24_14525 CP098602.1 Protein Homology CDS 3283790 3284755 . - 0 ID=cds-UUE97130.1;Parent=gene-NDY24_14525;Dbxref=NCBI_GP:UUE97130.1;Name=UUE97130.1;Ontology_term=GO:0019634,GO:0050188;gbkey=CDS;gene=aepX;go_function=phosphoenolpyruvate mutase activity|0050188||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010375707.1;locus_tag=NDY24_14525;product=phosphoenolpyruvate mutase;protein_id=UUE97130.1;transl_table=11 CP098602.1 Genbank gene 3284752 3284919 . - . ID=gene-NDY24_14530;Name=NDY24_14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14530 CP098602.1 GeneMarkS-2+ CDS 3284752 3284919 . - 0 ID=cds-UUE97131.1;Parent=gene-NDY24_14530;Dbxref=NCBI_GP:UUE97131.1;Name=UUE97131.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_14530;product=hypothetical protein;protein_id=UUE97131.1;transl_table=11 CP098602.1 Genbank gene 3285956 3287929 . - . ID=gene-NDY24_14535;Name=NDY24_14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14535 CP098602.1 Protein Homology CDS 3285956 3287929 . - 0 ID=cds-UUE97132.1;Parent=gene-NDY24_14535;Dbxref=NCBI_GP:UUE97132.1;Name=UUE97132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482737.1;locus_tag=NDY24_14535;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=UUE97132.1;transl_table=11 CP098602.1 Genbank gene 3288284 3289216 . - . ID=gene-NDY24_14540;Name=NDY24_14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14540 CP098602.1 Protein Homology CDS 3288284 3289216 . - 0 ID=cds-UUE97133.1;Parent=gene-NDY24_14540;Dbxref=NCBI_GP:UUE97133.1;Name=UUE97133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038567.1;locus_tag=NDY24_14540;product=carbohydrate kinase family protein;protein_id=UUE97133.1;transl_table=11 CP098602.1 Genbank gene 3289493 3290539 . + . ID=gene-NDY24_14545;Name=NDY24_14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14545 CP098602.1 Protein Homology CDS 3289493 3290539 . + 0 ID=cds-UUE97134.1;Parent=gene-NDY24_14545;Dbxref=NCBI_GP:UUE97134.1;Name=UUE97134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=NDY24_14545;product=rod shape-determining protein;protein_id=UUE97134.1;transl_table=11 CP098602.1 Genbank gene 3290712 3292091 . + . ID=gene-NDY24_14550;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=NDY24_14550 CP098602.1 Protein Homology CDS 3290712 3292091 . + 0 ID=cds-UUE97135.1;Parent=gene-NDY24_14550;Dbxref=NCBI_GP:UUE97135.1;Name=UUE97135.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112559.1;locus_tag=NDY24_14550;product=rod shape-determining protein MreC;protein_id=UUE97135.1;transl_table=11 CP098602.1 Genbank gene 3292088 3292573 . + . ID=gene-NDY24_14555;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=NDY24_14555 CP098602.1 Protein Homology CDS 3292088 3292573 . + 0 ID=cds-UUE97136.1;Parent=gene-NDY24_14555;Dbxref=NCBI_GP:UUE97136.1;Name=UUE97136.1;Ontology_term=GO:0008360,GO:0003674;gbkey=CDS;gene=mreD;go_function=molecular_function|0003674||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911183.1;locus_tag=NDY24_14555;product=rod shape-determining protein MreD;protein_id=UUE97136.1;transl_table=11 CP098602.1 Genbank gene 3292577 3294637 . + . ID=gene-NDY24_14560;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=NDY24_14560 CP098602.1 Protein Homology CDS 3292577 3294637 . + 0 ID=cds-UUE97137.1;Parent=gene-NDY24_14560;Dbxref=NCBI_GP:UUE97137.1;Name=UUE97137.1;Ontology_term=GO:0009252,GO:0003824;gbkey=CDS;gene=mrdA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303045.1;locus_tag=NDY24_14560;product=penicillin-binding protein 2;protein_id=UUE97137.1;transl_table=11 CP098602.1 Genbank gene 3294634 3295752 . + . ID=gene-NDY24_14565;Name=rodA;gbkey=Gene;gene=rodA;gene_biotype=protein_coding;locus_tag=NDY24_14565 CP098602.1 Protein Homology CDS 3294634 3295752 . + 0 ID=cds-UUE97138.1;Parent=gene-NDY24_14565;Dbxref=NCBI_GP:UUE97138.1;Name=UUE97138.1;Ontology_term=GO:0008360;gbkey=CDS;gene=rodA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573354.1;locus_tag=NDY24_14565;product=rod shape-determining protein RodA;protein_id=UUE97138.1;transl_table=11 CP098602.1 Genbank gene 3296045 3297742 . + . ID=gene-NDY24_14570;Name=NDY24_14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14570 CP098602.1 Protein Homology CDS 3296045 3297742 . + 0 ID=cds-UUE97139.1;Parent=gene-NDY24_14570;Dbxref=NCBI_GP:UUE97139.1;Name=UUE97139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155400.1;locus_tag=NDY24_14570;product=type IV secretory system conjugative DNA transfer family protein;protein_id=UUE97139.1;transl_table=11 CP098602.1 Genbank pseudogene 3298009 3298215 . + . ID=gene-NDY24_14575;Name=NDY24_14575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_14575;pseudo=true CP098602.1 Protein Homology CDS 3298009 3298215 . + 0 ID=cds-NDY24_14575;Parent=gene-NDY24_14575;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167461.1;locus_tag=NDY24_14575;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3298800 3299150 . + . ID=gene-NDY24_14580;Name=NDY24_14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14580 CP098602.1 Protein Homology CDS 3298800 3299150 . + 0 ID=cds-UUE97140.1;Parent=gene-NDY24_14580;Dbxref=NCBI_GP:UUE97140.1;Name=UUE97140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005415493.1;locus_tag=NDY24_14580;product=hypothetical protein;protein_id=UUE97140.1;transl_table=11 CP098602.1 Genbank pseudogene 3299214 3299480 . + . ID=gene-NDY24_14585;Name=NDY24_14585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_14585;pseudo=true CP098602.1 Protein Homology CDS 3299214 3299480 . + 0 ID=cds-NDY24_14585;Parent=gene-NDY24_14585;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018154.2;locus_tag=NDY24_14585;product=zeta toxin family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3299551 3302427 . + . ID=gene-NDY24_14590;Name=NDY24_14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14590 CP098602.1 Protein Homology CDS 3299551 3302427 . + 0 ID=cds-UUE97141.1;Parent=gene-NDY24_14590;Dbxref=NCBI_GP:UUE97141.1;Name=UUE97141.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018154.2;locus_tag=NDY24_14590;product=peptidoglycan-binding protein;protein_id=UUE97141.1;transl_table=11 CP098602.1 Genbank pseudogene 3302321 3302918 . + . ID=gene-NDY24_14595;Name=NDY24_14595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_14595;pseudo=true CP098602.1 Protein Homology CDS 3302321 3302918 . + 0 ID=cds-NDY24_14595;Parent=gene-NDY24_14595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159065.1;locus_tag=NDY24_14595;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 3303303 3304708 . + . ID=gene-NDY24_14600;Name=NDY24_14600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_14600;pseudo=true CP098602.1 Protein Homology CDS 3303303 3304708 . + 0 ID=cds-NDY24_14600;Parent=gene-NDY24_14600;Note=frameshifted;Ontology_term=GO:0005975,GO:0004650;gbkey=CDS;go_function=polygalacturonase activity|0004650||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346338.1;locus_tag=NDY24_14600;product=glycosyl hydrolase family 28 protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3304995 3306134 . + . ID=gene-NDY24_14605;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=NDY24_14605 CP098602.1 Protein Homology CDS 3304995 3306134 . + 0 ID=cds-UUE97142.1;Parent=gene-NDY24_14605;Dbxref=NCBI_GP:UUE97142.1;Name=UUE97142.1;Ontology_term=GO:0009253,GO:0016757;gbkey=CDS;gene=mltB;go_function=glycosyltransferase activity|0016757||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118980.1;locus_tag=NDY24_14605;product=lytic murein transglycosylase B;protein_id=UUE97142.1;transl_table=11 CP098602.1 Genbank gene 3306131 3307531 . + . ID=gene-NDY24_14610;Name=NDY24_14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14610 CP098602.1 Protein Homology CDS 3306131 3307531 . + 0 ID=cds-UUE97143.1;Parent=gene-NDY24_14610;Dbxref=NCBI_GP:UUE97143.1;Name=UUE97143.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155355.1;locus_tag=NDY24_14610;product=septal ring lytic transglycosylase RlpA family protein;protein_id=UUE97143.1;transl_table=11 CP098602.1 Genbank pseudogene 3307817 3309022 . + . ID=gene-NDY24_14615;Name=NDY24_14615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_14615;pseudo=true CP098602.1 Protein Homology CDS 3307817 3309022 . + 0 ID=cds-NDY24_14615;Parent=gene-NDY24_14615;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115444.1;locus_tag=NDY24_14615;product=D-alanyl-D-alanine carboxypeptidase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3309146 3310207 . - . ID=gene-NDY24_14620;Name=NDY24_14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14620 CP098602.1 Protein Homology CDS 3309146 3310207 . - 0 ID=cds-UUE97144.1;Parent=gene-NDY24_14620;Dbxref=NCBI_GP:UUE97144.1;Name=UUE97144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159067.1;locus_tag=NDY24_14620;product=lipid A deacylase LpxR family protein;protein_id=UUE97144.1;transl_table=11 CP098602.1 Genbank gene 3310498 3311481 . + . ID=gene-NDY24_14625;Name=NDY24_14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14625 CP098602.1 Protein Homology CDS 3310498 3311481 . + 0 ID=cds-UUE97145.1;Parent=gene-NDY24_14625;Dbxref=NCBI_GP:UUE97145.1;Name=UUE97145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089329.1;locus_tag=NDY24_14625;product=CsgG/HfaB family protein;protein_id=UUE97145.1;transl_table=11 CP098602.1 Genbank gene 3311621 3311899 . + . ID=gene-NDY24_14630;Name=NDY24_14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14630 CP098602.1 Protein Homology CDS 3311621 3311899 . + 0 ID=cds-UUE97146.1;Parent=gene-NDY24_14630;Dbxref=NCBI_GP:UUE97146.1;Name=UUE97146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409453.1;locus_tag=NDY24_14630;product=YbeD family protein;protein_id=UUE97146.1;transl_table=11 CP098602.1 Genbank gene 3311887 3312585 . + . ID=gene-NDY24_14635;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=NDY24_14635 CP098602.1 Protein Homology CDS 3311887 3312585 . + 0 ID=cds-UUE97147.1;Parent=gene-NDY24_14635;Dbxref=NCBI_GP:UUE97147.1;Name=UUE97147.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158468.1;locus_tag=NDY24_14635;product=lipoyl(octanoyl) transferase LipB;protein_id=UUE97147.1;transl_table=11 CP098602.1 Genbank gene 3312601 3313614 . + . ID=gene-NDY24_14640;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=NDY24_14640 CP098602.1 Protein Homology CDS 3312601 3313614 . + 0 ID=cds-UUE97148.1;Parent=gene-NDY24_14640;Dbxref=NCBI_GP:UUE97148.1;Name=UUE97148.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301161.1;locus_tag=NDY24_14640;product=lipoyl synthase;protein_id=UUE97148.1;transl_table=11 CP098602.1 Genbank gene 3313870 3316029 . + . ID=gene-NDY24_14645;Name=NDY24_14645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14645 CP098602.1 Protein Homology CDS 3313870 3316029 . + 0 ID=cds-UUF00419.1;Parent=gene-NDY24_14645;Dbxref=NCBI_GP:UUF00419.1;Name=UUF00419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155351.1;locus_tag=NDY24_14645;product=carboxy terminal-processing peptidase;protein_id=UUF00419.1;transl_table=11 CP098602.1 Genbank gene 3316455 3317333 . - . ID=gene-NDY24_14650;Name=NDY24_14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14650 CP098602.1 Protein Homology CDS 3316455 3317333 . - 0 ID=cds-UUE97149.1;Parent=gene-NDY24_14650;Dbxref=NCBI_GP:UUE97149.1;Name=UUE97149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159070.1;locus_tag=NDY24_14650;product=endonuclease/exonuclease/phosphatase family protein;protein_id=UUE97149.1;transl_table=11 CP098602.1 Genbank gene 3317504 3318559 . + . ID=gene-NDY24_14655;Name=NDY24_14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14655 CP098602.1 Protein Homology CDS 3317504 3318559 . + 0 ID=cds-UUE97150.1;Parent=gene-NDY24_14655;Dbxref=NCBI_GP:UUE97150.1;Name=UUE97150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303950.1;locus_tag=NDY24_14655;product=bifunctional nicotinamide-nucleotide adenylyltransferase/Nudix hydroxylase;protein_id=UUE97150.1;transl_table=11 CP098602.1 Genbank pseudogene 3318688 3320090 . + . ID=gene-NDY24_14660;Name=NDY24_14660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_14660;pseudo=true CP098602.1 Protein Homology CDS 3318688 3320090 . + 0 ID=cds-NDY24_14660;Parent=gene-NDY24_14660;Note=frameshifted;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005990339.1;locus_tag=NDY24_14660;product=nicotinate phosphoribosyltransferase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3320113 3321213 . + . ID=gene-NDY24_14665;Name=NDY24_14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14665 CP098602.1 Protein Homology CDS 3320113 3321213 . + 0 ID=cds-UUE97151.1;Parent=gene-NDY24_14665;Dbxref=NCBI_GP:UUE97151.1;Name=UUE97151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162368.1;locus_tag=NDY24_14665;product=hypothetical protein;protein_id=UUE97151.1;transl_table=11 CP098602.1 Genbank gene 3321206 3322270 . + . ID=gene-NDY24_14670;Name=NDY24_14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14670 CP098602.1 Protein Homology CDS 3321206 3322270 . + 0 ID=cds-UUE97152.1;Parent=gene-NDY24_14670;Dbxref=NCBI_GP:UUE97152.1;Name=UUE97152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089336.1;locus_tag=NDY24_14670;product=site-specific DNA-methyltransferase;protein_id=UUE97152.1;transl_table=11 CP098602.1 Genbank gene 3322345 3323148 . + . ID=gene-NDY24_14675;Name=NDY24_14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14675 CP098602.1 Protein Homology CDS 3322345 3323148 . + 0 ID=cds-UUE97153.1;Parent=gene-NDY24_14675;Dbxref=NCBI_GP:UUE97153.1;Name=UUE97153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155343.1;locus_tag=NDY24_14675;product=DUF2242 domain-containing protein;protein_id=UUE97153.1;transl_table=11 CP098602.1 Genbank gene 3323273 3323653 . + . ID=gene-NDY24_14680;Name=NDY24_14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14680 CP098602.1 Protein Homology CDS 3323273 3323653 . + 0 ID=cds-UUE97154.1;Parent=gene-NDY24_14680;Dbxref=NCBI_GP:UUE97154.1;Name=UUE97154.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911143.1;locus_tag=NDY24_14680;product=glycine zipper 2TM domain-containing protein;protein_id=UUE97154.1;transl_table=11 CP098602.1 Genbank gene 3323779 3325080 . + . ID=gene-NDY24_14685;Name=NDY24_14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14685 CP098602.1 Protein Homology CDS 3323779 3325080 . + 0 ID=cds-UUE97155.1;Parent=gene-NDY24_14685;Dbxref=NCBI_GP:UUE97155.1;Name=UUE97155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452626.1;locus_tag=NDY24_14685;product=hypothetical protein;protein_id=UUE97155.1;transl_table=11 CP098602.1 Genbank gene 3325101 3326042 . + . ID=gene-NDY24_14690;Name=gnd;gbkey=Gene;gene=gnd;gene_biotype=protein_coding;locus_tag=NDY24_14690 CP098602.1 Protein Homology CDS 3325101 3326042 . + 0 ID=cds-UUE97156.1;Parent=gene-NDY24_14690;Dbxref=NCBI_GP:UUE97156.1;Name=UUE97156.1;Ontology_term=GO:0006098,GO:0004616;gbkey=CDS;gene=gnd;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005990351.1;locus_tag=NDY24_14690;product=decarboxylating 6-phosphogluconate dehydrogenase;protein_id=UUE97156.1;transl_table=11 CP098602.1 Genbank gene 3326097 3327167 . - . ID=gene-NDY24_14695;Name=NDY24_14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14695 CP098602.1 Protein Homology CDS 3326097 3327167 . - 0 ID=cds-UUE97157.1;Parent=gene-NDY24_14695;Dbxref=NCBI_GP:UUE97157.1;Name=UUE97157.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452628.1;locus_tag=NDY24_14695;product=oxidoreductase;protein_id=UUE97157.1;transl_table=11 CP098602.1 Genbank gene 3327318 3327689 . + . ID=gene-NDY24_14700;Name=NDY24_14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14700 CP098602.1 Protein Homology CDS 3327318 3327689 . + 0 ID=cds-UUE97158.1;Parent=gene-NDY24_14700;Dbxref=NCBI_GP:UUE97158.1;Name=UUE97158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113055.1;locus_tag=NDY24_14700;product=BON domain-containing protein;protein_id=UUE97158.1;transl_table=11 CP098602.1 Genbank gene 3328009 3328479 . + . ID=gene-NDY24_14705;Name=NDY24_14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14705 CP098602.1 Protein Homology CDS 3328009 3328479 . + 0 ID=cds-UUE97159.1;Parent=gene-NDY24_14705;Dbxref=NCBI_GP:UUE97159.1;Name=UUE97159.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03645.1;locus_tag=NDY24_14705;product=lactoylglutathione lyase family protein;protein_id=UUE97159.1;transl_table=11 CP098602.1 Genbank gene 3328523 3328948 . + . ID=gene-NDY24_14710;Name=NDY24_14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14710 CP098602.1 GeneMarkS-2+ CDS 3328523 3328948 . + 0 ID=cds-UUF00524.1;Parent=gene-NDY24_14710;Dbxref=NCBI_GP:UUF00524.1;Name=UUF00524.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_14710;product=hypothetical protein;protein_id=UUF00524.1;transl_table=11 CP098602.1 Genbank gene 3328831 3329097 . + . ID=gene-NDY24_14715;Name=NDY24_14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14715 CP098602.1 Protein Homology CDS 3328831 3329097 . + 0 ID=cds-UUE97160.1;Parent=gene-NDY24_14715;Dbxref=NCBI_GP:UUE97160.1;Name=UUE97160.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019157.2;locus_tag=NDY24_14715;product=tannase/feruloyl esterase family alpha/beta hydrolase;protein_id=UUE97160.1;transl_table=11 CP098602.1 Genbank gene 3329072 3329497 . + . ID=gene-NDY24_14720;Name=NDY24_14720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14720 CP098602.1 Protein Homology CDS 3329072 3329497 . + 0 ID=cds-UUF00420.1;Parent=gene-NDY24_14720;Dbxref=NCBI_GP:UUF00420.1;Name=UUF00420.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019157.2;locus_tag=NDY24_14720;product=tannase/feruloyl esterase family alpha/beta hydrolase;protein_id=UUF00420.1;transl_table=11 CP098602.1 Genbank gene 3329562 3329846 . - . ID=gene-NDY24_14725;Name=NDY24_14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14725 CP098602.1 GeneMarkS-2+ CDS 3329562 3329846 . - 0 ID=cds-UUE97161.1;Parent=gene-NDY24_14725;Dbxref=NCBI_GP:UUE97161.1;Name=UUE97161.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_14725;product=hypothetical protein;protein_id=UUE97161.1;transl_table=11 CP098602.1 Genbank gene 3329863 3330330 . + . ID=gene-NDY24_14730;Name=NDY24_14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14730 CP098602.1 Protein Homology CDS 3329863 3330330 . + 0 ID=cds-UUE97162.1;Parent=gene-NDY24_14730;Dbxref=NCBI_GP:UUE97162.1;Name=UUE97162.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019157.2;locus_tag=NDY24_14730;product=tannase/feruloyl esterase family alpha/beta hydrolase;protein_id=UUE97162.1;transl_table=11 CP098602.1 Genbank gene 3330378 3331166 . + . ID=gene-NDY24_14735;Name=NDY24_14735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14735 CP098602.1 GeneMarkS-2+ CDS 3330378 3331166 . + 0 ID=cds-UUE97163.1;Parent=gene-NDY24_14735;Dbxref=NCBI_GP:UUE97163.1;Name=UUE97163.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_14735;product=hypothetical protein;protein_id=UUE97163.1;transl_table=11 CP098602.1 Genbank gene 3331201 3332124 . - . ID=gene-NDY24_14740;Name=NDY24_14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14740 CP098602.1 Protein Homology CDS 3331201 3332124 . - 0 ID=cds-UUE97164.1;Parent=gene-NDY24_14740;Dbxref=NCBI_GP:UUE97164.1;Name=UUE97164.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=NDY24_14740;product=LysR family transcriptional regulator;protein_id=UUE97164.1;transl_table=11 CP098602.1 Genbank gene 3332402 3334213 . + . ID=gene-NDY24_14745;Name=NDY24_14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14745 CP098602.1 Protein Homology CDS 3332402 3334213 . + 0 ID=cds-UUE97165.1;Parent=gene-NDY24_14745;Dbxref=NCBI_GP:UUE97165.1;Name=UUE97165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368210.1;locus_tag=NDY24_14745;product=ATP-binding protein;protein_id=UUE97165.1;transl_table=11 CP098602.1 Genbank gene 3334210 3334650 . + . ID=gene-NDY24_14750;Name=NDY24_14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14750 CP098602.1 Protein Homology CDS 3334210 3334650 . + 0 ID=cds-UUE97166.1;Parent=gene-NDY24_14750;Dbxref=NCBI_GP:UUE97166.1;Name=UUE97166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804768.1;locus_tag=NDY24_14750;product=response regulator;protein_id=UUE97166.1;transl_table=11 CP098602.1 Genbank gene 3334654 3336156 . + . ID=gene-NDY24_14755;Name=NDY24_14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14755 CP098602.1 Protein Homology CDS 3334654 3336156 . + 0 ID=cds-UUE97167.1;Parent=gene-NDY24_14755;Dbxref=NCBI_GP:UUE97167.1;Name=UUE97167.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346356.1;locus_tag=NDY24_14755;product=response regulator;protein_id=UUE97167.1;transl_table=11 CP098602.1 Genbank gene 3336250 3336762 . + . ID=gene-NDY24_14760;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=NDY24_14760 CP098602.1 Protein Homology CDS 3336250 3336762 . + 0 ID=cds-UUE97168.1;Parent=gene-NDY24_14760;Dbxref=NCBI_GP:UUE97168.1;Name=UUE97168.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482682.1;locus_tag=NDY24_14760;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=UUE97168.1;transl_table=11 CP098602.1 Genbank gene 3336775 3337512 . - . ID=gene-NDY24_14765;Name=NDY24_14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14765 CP098602.1 Protein Homology CDS 3336775 3337512 . - 0 ID=cds-UUE97169.1;Parent=gene-NDY24_14765;Dbxref=NCBI_GP:UUE97169.1;Name=UUE97169.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303260.1;locus_tag=NDY24_14765;product=pteridine reductase;protein_id=UUE97169.1;transl_table=11 CP098602.1 Genbank gene 3337511 3338764 . + . ID=gene-NDY24_14770;Name=NDY24_14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14770 CP098602.1 Protein Homology CDS 3337511 3338764 . + 0 ID=cds-UUF00421.1;Parent=gene-NDY24_14770;Dbxref=NCBI_GP:UUF00421.1;Name=UUF00421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237264.1;locus_tag=NDY24_14770;product=SAM-dependent methyltransferase;protein_id=UUF00421.1;transl_table=11 CP098602.1 Genbank gene 3338752 3339165 . + . ID=gene-NDY24_14775;Name=NDY24_14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14775 CP098602.1 Protein Homology CDS 3338752 3339165 . + 0 ID=cds-UUE97170.1;Parent=gene-NDY24_14775;Dbxref=NCBI_GP:UUE97170.1;Name=UUE97170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968563.1;locus_tag=NDY24_14775;product=VanZ family protein;protein_id=UUE97170.1;transl_table=11 CP098602.1 Genbank gene 3339811 3340668 . - . ID=gene-NDY24_14780;Name=NDY24_14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14780 CP098602.1 Protein Homology CDS 3339811 3340668 . - 0 ID=cds-UUE97171.1;Parent=gene-NDY24_14780;Dbxref=NCBI_GP:UUE97171.1;Name=UUE97171.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451278.1;locus_tag=NDY24_14780;product=2OG-Fe(II) oxygenase;protein_id=UUE97171.1;transl_table=11 CP098602.1 Genbank gene 3340856 3342334 . + . ID=gene-NDY24_14785;Name=NDY24_14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14785 CP098602.1 Protein Homology CDS 3340856 3342334 . + 0 ID=cds-UUE97172.1;Parent=gene-NDY24_14785;Dbxref=NCBI_GP:UUE97172.1;Name=UUE97172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005925144.1;locus_tag=NDY24_14785;product=hypothetical protein;protein_id=UUE97172.1;transl_table=11 CP098602.1 Genbank gene 3342413 3345076 . + . ID=gene-NDY24_14790;Name=NDY24_14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14790 CP098602.1 Protein Homology CDS 3342413 3345076 . + 0 ID=cds-UUE97173.1;Parent=gene-NDY24_14790;Dbxref=NCBI_GP:UUE97173.1;Name=UUE97173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005923614.1;locus_tag=NDY24_14790;product=TonB-dependent receptor;protein_id=UUE97173.1;transl_table=11 CP098602.1 Genbank gene 3345236 3346054 . + . ID=gene-NDY24_14795;Name=NDY24_14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14795 CP098602.1 Protein Homology CDS 3345236 3346054 . + 0 ID=cds-UUE97174.1;Parent=gene-NDY24_14795;Dbxref=NCBI_GP:UUE97174.1;Name=UUE97174.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167446.1;locus_tag=NDY24_14795;product=PDZ domain-containing protein;protein_id=UUE97174.1;transl_table=11 CP098602.1 Genbank gene 3346051 3348129 . + . ID=gene-NDY24_14800;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=NDY24_14800 CP098602.1 Protein Homology CDS 3346051 3348129 . + 0 ID=cds-UUE97175.1;Parent=gene-NDY24_14800;Dbxref=NCBI_GP:UUE97175.1;Name=UUE97175.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156677.1;locus_tag=NDY24_14800;product=type II secretion system secretin GspD;protein_id=UUE97175.1;transl_table=11 CP098602.1 Genbank gene 3348134 3349621 . + . ID=gene-NDY24_14805;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=NDY24_14805 CP098602.1 Protein Homology CDS 3348134 3349621 . + 0 ID=cds-UUE97176.1;Parent=gene-NDY24_14805;Dbxref=NCBI_GP:UUE97176.1;Name=UUE97176.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482668.1;locus_tag=NDY24_14805;product=type II secretion system ATPase GspE;protein_id=UUE97176.1;transl_table=11 CP098602.1 Genbank gene 3349608 3350804 . + . ID=gene-NDY24_14810;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;locus_tag=NDY24_14810 CP098602.1 Protein Homology CDS 3349608 3350804 . + 0 ID=cds-UUE97177.1;Parent=gene-NDY24_14810;Dbxref=NCBI_GP:UUE97177.1;Name=UUE97177.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspF;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972768.1;locus_tag=NDY24_14810;product=type II secretion system inner membrane protein GspF;protein_id=UUE97177.1;transl_table=11 CP098602.1 Genbank gene 3350833 3351297 . + . ID=gene-NDY24_14815;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=NDY24_14815 CP098602.1 Protein Homology CDS 3350833 3351297 . + 0 ID=cds-UUE97178.1;Parent=gene-NDY24_14815;Dbxref=NCBI_GP:UUE97178.1;Name=UUE97178.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156680.1;locus_tag=NDY24_14815;product=type II secretion system major pseudopilin GspG;protein_id=UUE97178.1;transl_table=11 CP098602.1 Genbank gene 3351364 3351807 . + . ID=gene-NDY24_14820;Name=NDY24_14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14820 CP098602.1 Protein Homology CDS 3351364 3351807 . + 0 ID=cds-UUF00422.1;Parent=gene-NDY24_14820;Dbxref=NCBI_GP:UUF00422.1;Name=UUF00422.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005990391.1;locus_tag=NDY24_14820;product=GspH/FimT family pseudopilin;protein_id=UUF00422.1;transl_table=11 CP098602.1 Genbank gene 3351791 3352171 . + . ID=gene-NDY24_14825;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=NDY24_14825 CP098602.1 Protein Homology CDS 3351791 3352171 . + 0 ID=cds-UUE97179.1;Parent=gene-NDY24_14825;Dbxref=NCBI_GP:UUE97179.1;Name=UUE97179.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspI;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156682.1;locus_tag=NDY24_14825;product=type II secretion system minor pseudopilin GspI;protein_id=UUE97179.1;transl_table=11 CP098602.1 Genbank gene 3352168 3352791 . + . ID=gene-NDY24_14830;Name=gspJ;gbkey=Gene;gene=gspJ;gene_biotype=protein_coding;locus_tag=NDY24_14830 CP098602.1 Protein Homology CDS 3352168 3352791 . + 0 ID=cds-UUE97180.1;Parent=gene-NDY24_14830;Dbxref=NCBI_GP:UUE97180.1;Name=UUE97180.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspJ;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016900871.1;locus_tag=NDY24_14830;product=type II secretion system minor pseudopilin GspJ;protein_id=UUE97180.1;transl_table=11 CP098602.1 Genbank gene 3352788 3353780 . + . ID=gene-NDY24_14835;Name=gspK;gbkey=Gene;gene=gspK;gene_biotype=protein_coding;locus_tag=NDY24_14835 CP098602.1 Protein Homology CDS 3352788 3353780 . + 0 ID=cds-UUE97181.1;Parent=gene-NDY24_14835;Dbxref=NCBI_GP:UUE97181.1;Name=UUE97181.1;Ontology_term=GO:0009306,GO:0016021;gbkey=CDS;gene=gspK;go_component=integral component of membrane|0016021||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016900872.1;locus_tag=NDY24_14835;product=type II secretion system minor pseudopilin GspK;protein_id=UUE97181.1;transl_table=11 CP098602.1 Genbank gene 3353777 3354865 . + . ID=gene-NDY24_14840;Name=gspL;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=NDY24_14840 CP098602.1 Protein Homology CDS 3353777 3354865 . + 0 ID=cds-UUE97182.1;Parent=gene-NDY24_14840;Dbxref=NCBI_GP:UUE97182.1;Name=UUE97182.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspL;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166048.1;locus_tag=NDY24_14840;product=type II secretion system protein GspL;protein_id=UUE97182.1;transl_table=11 CP098602.1 Genbank gene 3354862 3355338 . + . ID=gene-NDY24_14845;Name=NDY24_14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14845 CP098602.1 Protein Homology CDS 3354862 3355338 . + 0 ID=cds-UUE97183.1;Parent=gene-NDY24_14845;Dbxref=NCBI_GP:UUE97183.1;Name=UUE97183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482652.1;locus_tag=NDY24_14845;product=type II secretion system protein M;protein_id=UUE97183.1;transl_table=11 CP098602.1 Genbank gene 3355371 3356054 . + . ID=gene-NDY24_14850;Name=NDY24_14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14850 CP098602.1 Protein Homology CDS 3355371 3356054 . + 0 ID=cds-UUF00423.1;Parent=gene-NDY24_14850;Dbxref=NCBI_GP:UUF00423.1;Name=UUF00423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346376.1;locus_tag=NDY24_14850;product=type II secretion system protein N;protein_id=UUF00423.1;transl_table=11 CP098602.1 Genbank gene 3356781 3359489 . + . ID=gene-NDY24_14855;Name=NDY24_14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14855 CP098602.1 Protein Homology CDS 3356781 3359489 . + 0 ID=cds-UUE97184.1;Parent=gene-NDY24_14855;Dbxref=NCBI_GP:UUE97184.1;Name=UUE97184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050492.1;locus_tag=NDY24_14855;product=TonB-dependent receptor;protein_id=UUE97184.1;transl_table=11 CP098602.1 Genbank gene 3359654 3362548 . + . ID=gene-NDY24_14860;Name=NDY24_14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14860 CP098602.1 Protein Homology CDS 3359654 3362548 . + 0 ID=cds-UUE97185.1;Parent=gene-NDY24_14860;Dbxref=NCBI_GP:UUE97185.1;Name=UUE97185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451298.1;locus_tag=NDY24_14860;product=DUF4982 domain-containing protein;protein_id=UUE97185.1;transl_table=11 CP098602.1 Genbank gene 3362545 3363228 . + . ID=gene-NDY24_14865;Name=NDY24_14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14865 CP098602.1 Protein Homology CDS 3362545 3363228 . + 0 ID=cds-UUE97186.1;Parent=gene-NDY24_14865;Dbxref=NCBI_GP:UUE97186.1;Name=UUE97186.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024373.2;locus_tag=NDY24_14865;product=alpha-N-acetylglucosaminidase;protein_id=UUE97186.1;transl_table=11 CP098602.1 Genbank gene 3363679 3365082 . + . ID=gene-NDY24_14870;Name=NDY24_14870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14870 CP098602.1 Protein Homology CDS 3363679 3365082 . + 0 ID=cds-UUE97187.1;Parent=gene-NDY24_14870;Dbxref=NCBI_GP:UUE97187.1;Name=UUE97187.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024374.2;locus_tag=NDY24_14870;product=alpha-N-acetylglucosaminidase;protein_id=UUE97187.1;transl_table=11 CP098602.1 Genbank pseudogene 3365079 3366250 . + . ID=gene-NDY24_14875;Name=NDY24_14875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_14875;pseudo=true CP098602.1 Protein Homology CDS 3365079 3366250 . + 0 ID=cds-NDY24_14875;Parent=gene-NDY24_14875;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911069.1;locus_tag=NDY24_14875;product=heparan-alpha-glucosaminide N-acetyltransferase domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3366508 3367230 . + . ID=gene-NDY24_14880;Name=NDY24_14880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14880 CP098602.1 Protein Homology CDS 3366508 3367230 . + 0 ID=cds-UUF00424.1;Parent=gene-NDY24_14880;Dbxref=NCBI_GP:UUF00424.1;Name=UUF00424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156688.1;locus_tag=NDY24_14880;product=GntR family transcriptional regulator;protein_id=UUF00424.1;transl_table=11 CP098602.1 Genbank gene 3367276 3368550 . + . ID=gene-NDY24_14885;Name=NDY24_14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14885 CP098602.1 Protein Homology CDS 3367276 3368550 . + 0 ID=cds-UUE97188.1;Parent=gene-NDY24_14885;Dbxref=NCBI_GP:UUE97188.1;Name=UUE97188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911064.1;locus_tag=NDY24_14885;product=sugar MFS transporter;protein_id=UUE97188.1;transl_table=11 CP098602.1 Genbank gene 3368591 3369658 . + . ID=gene-NDY24_14890;Name=NDY24_14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14890 CP098602.1 Protein Homology CDS 3368591 3369658 . + 0 ID=cds-UUE97189.1;Parent=gene-NDY24_14890;Dbxref=NCBI_GP:UUE97189.1;Name=UUE97189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451304.1;locus_tag=NDY24_14890;product=LacI family DNA-binding transcriptional regulator;protein_id=UUE97189.1;transl_table=11 CP098602.1 Genbank gene 3369664 3370692 . + . ID=gene-NDY24_14895;Name=NDY24_14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14895 CP098602.1 Protein Homology CDS 3369664 3370692 . + 0 ID=cds-UUE97190.1;Parent=gene-NDY24_14895;Dbxref=NCBI_GP:UUE97190.1;Name=UUE97190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995982.1;locus_tag=NDY24_14895;product=SIS domain-containing protein;protein_id=UUE97190.1;transl_table=11 CP098602.1 Genbank gene 3370695 3371849 . + . ID=gene-NDY24_14900;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=NDY24_14900 CP098602.1 Protein Homology CDS 3370695 3371849 . + 0 ID=cds-UUE97191.1;Parent=gene-NDY24_14900;Dbxref=NCBI_GP:UUE97191.1;Name=UUE97191.1;Ontology_term=GO:0006040,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=amino sugar metabolic process|0006040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995980.1;locus_tag=NDY24_14900;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=UUE97191.1;transl_table=11 CP098602.1 Genbank gene 3372067 3372378 . + . ID=gene-NDY24_14905;Name=NDY24_14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14905 CP098602.1 GeneMarkS-2+ CDS 3372067 3372378 . + 0 ID=cds-UUE97192.1;Parent=gene-NDY24_14905;Dbxref=NCBI_GP:UUE97192.1;Name=UUE97192.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_14905;product=hypothetical protein;protein_id=UUE97192.1;transl_table=11 CP098602.1 Genbank gene 3372365 3373444 . + . ID=gene-NDY24_14910;Name=NDY24_14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14910 CP098602.1 Protein Homology CDS 3372365 3373444 . + 0 ID=cds-UUE97193.1;Parent=gene-NDY24_14910;Dbxref=NCBI_GP:UUE97193.1;Name=UUE97193.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015531.2;locus_tag=NDY24_14910;product=S41 family peptidase;protein_id=UUE97193.1;transl_table=11 CP098602.1 Genbank gene 3374078 3376741 . + . ID=gene-NDY24_14915;Name=NDY24_14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14915 CP098602.1 Protein Homology CDS 3374078 3376741 . + 0 ID=cds-UUE97194.1;Parent=gene-NDY24_14915;Dbxref=NCBI_GP:UUE97194.1;Name=UUE97194.1;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437396.1;locus_tag=NDY24_14915;product=TonB-dependent receptor;protein_id=UUE97194.1;transl_table=11 CP098602.1 Genbank gene 3377001 3378239 . - . ID=gene-NDY24_14920;Name=NDY24_14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14920 CP098602.1 Protein Homology CDS 3377001 3378239 . - 0 ID=cds-UUE97195.1;Parent=gene-NDY24_14920;Dbxref=NCBI_GP:UUE97195.1;Name=UUE97195.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,tRNA adenylyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016944403.1;locus_tag=NDY24_14920;product=multifunctional CCA addition/repair protein;protein_id=UUE97195.1;transl_table=11 CP098602.1 Genbank pseudogene 3378960 3380935 . - . ID=gene-NDY24_14925;Name=NDY24_14925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_14925;pseudo=true CP098602.1 Protein Homology CDS 3378960 3380935 . - 0 ID=cds-NDY24_14925;Parent=gene-NDY24_14925;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159790.1;locus_tag=NDY24_14925;product=transglycosylase SLT domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3381206 3384085 . + . ID=gene-NDY24_14930;Name=NDY24_14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14930 CP098602.1 Protein Homology CDS 3381206 3384085 . + 0 ID=cds-UUE97196.1;Parent=gene-NDY24_14930;Dbxref=NCBI_GP:UUE97196.1;Name=UUE97196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348595.1;locus_tag=NDY24_14930;product=TonB-dependent receptor;protein_id=UUE97196.1;transl_table=11 CP098602.1 Genbank gene 3384580 3385343 . - . ID=gene-NDY24_14935;Name=NDY24_14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14935 CP098602.1 Protein Homology CDS 3385028 3385343 . - 0 ID=cds-UUE97197.1;Parent=gene-NDY24_14935;Dbxref=NCBI_GP:UUE97197.1;Name=UUE97197.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=NDY24_14935;product=IS5 family transposase;protein_id=UUE97197.1;transl_table=11 CP098602.1 Protein Homology CDS 3384580 3385028 . - 2 ID=cds-UUE97197.1;Parent=gene-NDY24_14935;Dbxref=NCBI_GP:UUE97197.1;Name=UUE97197.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=NDY24_14935;product=IS5 family transposase;protein_id=UUE97197.1;transl_table=11 CP098602.1 Genbank gene 3385397 3387067 . - . ID=gene-NDY24_14940;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=NDY24_14940 CP098602.1 Protein Homology CDS 3385397 3387067 . - 0 ID=cds-UUF00425.1;Parent=gene-NDY24_14940;Dbxref=NCBI_GP:UUF00425.1;Name=UUF00425.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050499.1;locus_tag=NDY24_14940;product=choline dehydrogenase;protein_id=UUF00425.1;transl_table=11 CP098602.1 Genbank gene 3387227 3388699 . - . ID=gene-NDY24_14945;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=NDY24_14945 CP098602.1 Protein Homology CDS 3387227 3388699 . - 0 ID=cds-UUE97198.1;Parent=gene-NDY24_14945;Dbxref=NCBI_GP:UUE97198.1;Name=UUE97198.1;Ontology_term=GO:0019285,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269520.1;locus_tag=NDY24_14945;product=betaine-aldehyde dehydrogenase;protein_id=UUE97198.1;transl_table=11 CP098602.1 Genbank gene 3388740 3390719 . - . ID=gene-NDY24_14950;Name=betT;gbkey=Gene;gene=betT;gene_biotype=protein_coding;locus_tag=NDY24_14950 CP098602.1 Protein Homology CDS 3388740 3390719 . - 0 ID=cds-UUE97199.1;Parent=gene-NDY24_14950;Dbxref=NCBI_GP:UUE97199.1;Name=UUE97199.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;gene=betT;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451628.1;locus_tag=NDY24_14950;product=choline BCCT transporter BetT;protein_id=UUE97199.1;transl_table=11 CP098602.1 Genbank gene 3390856 3391593 . - . ID=gene-NDY24_14955;Name=NDY24_14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14955 CP098602.1 Protein Homology CDS 3390856 3391593 . - 0 ID=cds-UUF00426.1;Parent=gene-NDY24_14955;Dbxref=NCBI_GP:UUF00426.1;Name=UUF00426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409416.1;locus_tag=NDY24_14955;product=endonuclease/exonuclease/phosphatase family protein;protein_id=UUF00426.1;transl_table=11 CP098602.1 Genbank gene 3391643 3392458 . - . ID=gene-NDY24_14960;Name=NDY24_14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14960 CP098602.1 Protein Homology CDS 3391643 3392458 . - 0 ID=cds-UUE97200.1;Parent=gene-NDY24_14960;Dbxref=NCBI_GP:UUE97200.1;Name=UUE97200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089366.1;locus_tag=NDY24_14960;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=UUE97200.1;transl_table=11 CP098602.1 Genbank gene 3392550 3393200 . - . ID=gene-NDY24_14965;Name=NDY24_14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14965 CP098602.1 Protein Homology CDS 3392550 3393200 . - 0 ID=cds-UUE97201.1;Parent=gene-NDY24_14965;Dbxref=NCBI_GP:UUE97201.1;Name=UUE97201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482610.1;locus_tag=NDY24_14965;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=UUE97201.1;transl_table=11 CP098602.1 Genbank gene 3393294 3394094 . - . ID=gene-NDY24_14970;Name=NDY24_14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14970 CP098602.1 Protein Homology CDS 3393294 3394094 . - 0 ID=cds-UUE97202.1;Parent=gene-NDY24_14970;Dbxref=NCBI_GP:UUE97202.1;Name=UUE97202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911041.1;locus_tag=NDY24_14970;product=cytochrome c4;protein_id=UUE97202.1;transl_table=11 CP098602.1 Genbank gene 3394239 3394865 . + . ID=gene-NDY24_14975;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=NDY24_14975 CP098602.1 Protein Homology CDS 3394239 3394865 . + 0 ID=cds-UUE97203.1;Parent=gene-NDY24_14975;Dbxref=NCBI_GP:UUE97203.1;Name=UUE97203.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010344572.1;locus_tag=NDY24_14975;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=UUE97203.1;transl_table=11 CP098602.1 Genbank gene 3395014 3395994 . - . ID=gene-NDY24_14980;Name=NDY24_14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14980 CP098602.1 Protein Homology CDS 3395014 3395994 . - 0 ID=cds-UUE97204.1;Parent=gene-NDY24_14980;Dbxref=NCBI_GP:UUE97204.1;Name=UUE97204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472584.1;locus_tag=NDY24_14980;product=MBL fold metallo-hydrolase;protein_id=UUE97204.1;transl_table=11 CP098602.1 Genbank gene 3396099 3396893 . - . ID=gene-NDY24_14985;Name=NDY24_14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14985 CP098602.1 Protein Homology CDS 3396099 3396893 . - 0 ID=cds-UUE97205.1;Parent=gene-NDY24_14985;Dbxref=NCBI_GP:UUE97205.1;Name=UUE97205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968629.1;locus_tag=NDY24_14985;product=helix-turn-helix transcriptional regulator;protein_id=UUE97205.1;transl_table=11 CP098602.1 Genbank gene 3397301 3398665 . + . ID=gene-NDY24_14990;Name=NDY24_14990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14990 CP098602.1 Protein Homology CDS 3397301 3398665 . + 0 ID=cds-UUE97206.1;Parent=gene-NDY24_14990;Dbxref=NCBI_GP:UUE97206.1;Name=UUE97206.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003477658.1;locus_tag=NDY24_14990;product=glutamate--cysteine ligase;protein_id=UUE97206.1;transl_table=11 CP098602.1 Genbank gene 3398914 3400434 . - . ID=gene-NDY24_14995;Name=NDY24_14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_14995 CP098602.1 Protein Homology CDS 3398914 3400434 . - 0 ID=cds-UUE97207.1;Parent=gene-NDY24_14995;Dbxref=NCBI_GP:UUE97207.1;Name=UUE97207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576761.1;locus_tag=NDY24_14995;product=ATP-binding protein;protein_id=UUE97207.1;transl_table=11 CP098602.1 Genbank gene 3400431 3401210 . - . ID=gene-NDY24_15000;Name=NDY24_15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15000 CP098602.1 Protein Homology CDS 3400431 3401210 . - 0 ID=cds-UUE97208.1;Parent=gene-NDY24_15000;Dbxref=NCBI_GP:UUE97208.1;Name=UUE97208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902620.1;locus_tag=NDY24_15000;product=response regulator transcription factor;protein_id=UUE97208.1;transl_table=11 CP098602.1 Genbank gene 3401288 3402388 . + . ID=gene-NDY24_15005;Name=NDY24_15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15005 CP098602.1 Protein Homology CDS 3401288 3402388 . + 0 ID=cds-UUE97209.1;Parent=gene-NDY24_15005;Dbxref=NCBI_GP:UUE97209.1;Name=UUE97209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005925236.1;locus_tag=NDY24_15005;product=glycosyltransferase;protein_id=UUE97209.1;transl_table=11 CP098602.1 Genbank gene 3402600 3402905 . + . ID=gene-NDY24_15010;Name=NDY24_15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15010 CP098602.1 Protein Homology CDS 3402600 3402905 . + 0 ID=cds-UUE97210.1;Parent=gene-NDY24_15010;Dbxref=NCBI_GP:UUE97210.1;Name=UUE97210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911023.1;locus_tag=NDY24_15010;product=hypothetical protein;protein_id=UUE97210.1;transl_table=11 CP098602.1 Genbank gene 3403175 3404137 . + . ID=gene-NDY24_15015;Name=NDY24_15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15015 CP098602.1 Protein Homology CDS 3403175 3404137 . + 0 ID=cds-UUE97211.1;Parent=gene-NDY24_15015;Dbxref=NCBI_GP:UUE97211.1;Name=UUE97211.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024583.2;locus_tag=NDY24_15015;product=PAS domain-containing protein;protein_id=UUE97211.1;transl_table=11 CP098602.1 Genbank gene 3404055 3407195 . + . ID=gene-NDY24_15020;Name=NDY24_15020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15020 CP098602.1 Protein Homology CDS 3404055 3407195 . + 0 ID=cds-UUE97212.1;Parent=gene-NDY24_15020;Dbxref=NCBI_GP:UUE97212.1;Name=UUE97212.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00229.1;locus_tag=NDY24_15020;product=PAS domain S-box protein;protein_id=UUE97212.1;transl_table=11 CP098602.1 Genbank gene 3407090 3407323 . + . ID=gene-NDY24_15025;Name=NDY24_15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15025 CP098602.1 Protein Homology CDS 3407090 3407323 . + 0 ID=cds-UUE97213.1;Parent=gene-NDY24_15025;Dbxref=NCBI_GP:UUE97213.1;Name=UUE97213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384071.1;locus_tag=NDY24_15025;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=UUE97213.1;transl_table=11 CP098602.1 Genbank gene 3407387 3408496 . + . ID=gene-NDY24_15030;Name=NDY24_15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15030 CP098602.1 Protein Homology CDS 3407387 3408496 . + 0 ID=cds-UUE97214.1;Parent=gene-NDY24_15030;Dbxref=NCBI_GP:UUE97214.1;Name=UUE97214.1;Ontology_term=GO:0006113,GO:0009404,GO:0004024,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase activity%2C zinc-dependent|0004024||IEA,S-(hydroxymethyl)glutathione dehydrogenase activity|0051903||IEA;go_process=fermentation|0006113||IEA,toxin metabolic process|0009404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003477647.1;locus_tag=NDY24_15030;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=UUE97214.1;transl_table=11 CP098602.1 Genbank gene 3408565 3409140 . + . ID=gene-NDY24_15035;Name=gfa;gbkey=Gene;gene=gfa;gene_biotype=protein_coding;locus_tag=NDY24_15035 CP098602.1 Protein Homology CDS 3408565 3409140 . + 0 ID=cds-UUE97215.1;Parent=gene-NDY24_15035;Dbxref=NCBI_GP:UUE97215.1;Name=UUE97215.1;Ontology_term=GO:0046292,GO:0051907;gbkey=CDS;gene=gfa;go_function=S-(hydroxymethyl)glutathione synthase activity|0051907||IEA;go_process=formaldehyde metabolic process|0046292||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156708.1;locus_tag=NDY24_15035;product=S-(hydroxymethyl)glutathione synthase;protein_id=UUE97215.1;transl_table=11 CP098602.1 Genbank gene 3409199 3410029 . + . ID=gene-NDY24_15040;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=NDY24_15040 CP098602.1 Protein Homology CDS 3409199 3410029 . + 0 ID=cds-UUE97216.1;Parent=gene-NDY24_15040;Dbxref=NCBI_GP:UUE97216.1;Name=UUE97216.1;Ontology_term=GO:0046292,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde metabolic process|0046292||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451642.1;locus_tag=NDY24_15040;product=S-formylglutathione hydrolase;protein_id=UUE97216.1;transl_table=11 CP098602.1 Genbank gene 3410471 3411880 . - . ID=gene-NDY24_15045;Name=NDY24_15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15045 CP098602.1 Protein Homology CDS 3410471 3411880 . - 0 ID=cds-UUE97217.1;Parent=gene-NDY24_15045;Dbxref=NCBI_GP:UUE97217.1;Name=UUE97217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508938.1;locus_tag=NDY24_15045;product=PLP-dependent aminotransferase family protein;protein_id=UUE97217.1;transl_table=11 CP098602.1 Genbank gene 3412011 3412802 . + . ID=gene-NDY24_15050;Name=NDY24_15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15050 CP098602.1 Protein Homology CDS 3412011 3412802 . + 0 ID=cds-UUE97218.1;Parent=gene-NDY24_15050;Dbxref=NCBI_GP:UUE97218.1;Name=UUE97218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004426068.1;locus_tag=NDY24_15050;product=PhzF family phenazine biosynthesis protein;protein_id=UUE97218.1;transl_table=11 CP098602.1 Genbank gene 3412799 3413725 . + . ID=gene-NDY24_15055;Name=NDY24_15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15055 CP098602.1 Protein Homology CDS 3412799 3413725 . + 0 ID=cds-UUE97219.1;Parent=gene-NDY24_15055;Dbxref=NCBI_GP:UUE97219.1;Name=UUE97219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448760.1;locus_tag=NDY24_15055;product=DMT family transporter;protein_id=UUE97219.1;transl_table=11 CP098602.1 Genbank gene 3413767 3414105 . - . ID=gene-NDY24_15060;Name=NDY24_15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15060 CP098602.1 Protein Homology CDS 3413767 3414105 . - 0 ID=cds-UUE97220.1;Parent=gene-NDY24_15060;Dbxref=NCBI_GP:UUE97220.1;Name=UUE97220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019299887.1;locus_tag=NDY24_15060;product=hypothetical protein;protein_id=UUE97220.1;transl_table=11 CP098602.1 Genbank pseudogene 3415081 3416023 . - . ID=gene-NDY24_15065;Name=NDY24_15065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_15065;pseudo=true CP098602.1 Protein Homology CDS 3415081 3416023 . - 0 ID=cds-NDY24_15065;Parent=gene-NDY24_15065;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157525.1;locus_tag=NDY24_15065;product=DegV family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3416510 3417325 . + . ID=gene-NDY24_15070;Name=NDY24_15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15070 CP098602.1 Protein Homology CDS 3416510 3417325 . + 0 ID=cds-UUE97221.1;Parent=gene-NDY24_15070;Dbxref=NCBI_GP:UUE97221.1;Name=UUE97221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171825.1;locus_tag=NDY24_15070;product=cellulase;protein_id=UUE97221.1;transl_table=11 CP098602.1 Genbank gene 3417615 3418361 . + . ID=gene-NDY24_15075;Name=NDY24_15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15075 CP098602.1 Protein Homology CDS 3417615 3418361 . + 0 ID=cds-UUF00427.1;Parent=gene-NDY24_15075;Dbxref=NCBI_GP:UUF00427.1;Name=UUF00427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365555.1;locus_tag=NDY24_15075;product=cellulase;protein_id=UUF00427.1;transl_table=11 CP098602.1 Genbank gene 3418564 3420171 . - . ID=gene-NDY24_15080;Name=NDY24_15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15080 CP098602.1 Protein Homology CDS 3418564 3420171 . - 0 ID=cds-UUE97222.1;Parent=gene-NDY24_15080;Dbxref=NCBI_GP:UUE97222.1;Name=UUE97222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303680.1;locus_tag=NDY24_15080;product=polysaccharide lyase family protein;protein_id=UUE97222.1;transl_table=11 CP098602.1 Genbank gene 3420379 3420705 . - . ID=gene-NDY24_15085;Name=NDY24_15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15085 CP098602.1 Protein Homology CDS 3420379 3420705 . - 0 ID=cds-UUF00428.1;Parent=gene-NDY24_15085;Dbxref=NCBI_GP:UUF00428.1;Name=UUF00428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162724.1;locus_tag=NDY24_15085;product=hypothetical protein;protein_id=UUF00428.1;transl_table=11 CP098602.1 Genbank gene 3420844 3421257 . - . ID=gene-NDY24_15090;Name=NDY24_15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15090 CP098602.1 Protein Homology CDS 3420844 3421257 . - 0 ID=cds-UUE97223.1;Parent=gene-NDY24_15090;Dbxref=NCBI_GP:UUE97223.1;Name=UUE97223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508930.1;locus_tag=NDY24_15090;product=DUF2809 domain-containing protein;protein_id=UUE97223.1;transl_table=11 CP098602.1 Genbank gene 3421412 3422692 . - . ID=gene-NDY24_15095;Name=NDY24_15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15095 CP098602.1 Protein Homology CDS 3421412 3422692 . - 0 ID=cds-UUE97224.1;Parent=gene-NDY24_15095;Dbxref=NCBI_GP:UUE97224.1;Name=UUE97224.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913553.1;locus_tag=NDY24_15095;product=amidohydrolase family protein;protein_id=UUE97224.1;transl_table=11 CP098602.1 Genbank gene 3422689 3424086 . - . ID=gene-NDY24_15100;Name=NDY24_15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15100 CP098602.1 Protein Homology CDS 3422689 3424086 . - 0 ID=cds-UUE97225.1;Parent=gene-NDY24_15100;Dbxref=NCBI_GP:UUE97225.1;Name=UUE97225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972236.1;locus_tag=NDY24_15100;product=amidohydrolase;protein_id=UUE97225.1;transl_table=11 CP098602.1 Genbank gene 3424227 3424787 . + . ID=gene-NDY24_15105;Name=NDY24_15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15105 CP098602.1 Protein Homology CDS 3424227 3424787 . + 0 ID=cds-UUE97226.1;Parent=gene-NDY24_15105;Dbxref=NCBI_GP:UUE97226.1;Name=UUE97226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112270.1;locus_tag=NDY24_15105;product=DUF924 family protein;protein_id=UUE97226.1;transl_table=11 CP098602.1 Genbank gene 3425199 3426155 . - . ID=gene-NDY24_15110;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=NDY24_15110 CP098602.1 Protein Homology CDS 3425199 3426155 . - 0 ID=cds-UUE97227.1;Parent=gene-NDY24_15110;Dbxref=NCBI_GP:UUE97227.1;Name=UUE97227.1;Ontology_term=GO:0009055;gbkey=CDS;gene=grxD;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913558.1;locus_tag=NDY24_15110;product=Grx4 family monothiol glutaredoxin;protein_id=UUE97227.1;transl_table=11 CP098602.1 Genbank gene 3426216 3426992 . + . ID=gene-NDY24_15115;Name=NDY24_15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15115 CP098602.1 Protein Homology CDS 3426216 3426992 . + 0 ID=cds-UUE97228.1;Parent=gene-NDY24_15115;Dbxref=NCBI_GP:UUE97228.1;Name=UUE97228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993124.1;locus_tag=NDY24_15115;product=polysaccharide deacetylase family protein;protein_id=UUE97228.1;transl_table=11 CP098602.1 Genbank gene 3427397 3429586 . + . ID=gene-NDY24_15120;Name=NDY24_15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15120 CP098602.1 Protein Homology CDS 3427397 3429586 . + 0 ID=cds-UUE97229.1;Parent=gene-NDY24_15120;Dbxref=NCBI_GP:UUE97229.1;Name=UUE97229.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902301.1;locus_tag=NDY24_15120;product=TonB-dependent siderophore receptor;protein_id=UUE97229.1;transl_table=11 CP098602.1 Genbank gene 3430286 3430361 . + . ID=gene-NDY24_15125;Name=NDY24_15125;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_15125 CP098602.1 cmsearch ncRNA 3430286 3430361 . + . ID=rna-NDY24_15125;Parent=gene-NDY24_15125;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_15125;product=sX9 sRNA CP098602.1 cmsearch exon 3430286 3430361 . + . ID=exon-NDY24_15125-1;Parent=rna-NDY24_15125;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_15125;product=sX9 sRNA CP098602.1 Genbank pseudogene 3430399 3431067 . - . ID=gene-NDY24_15130;Name=NDY24_15130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_15130;pseudo=true CP098602.1 Protein Homology CDS 3430399 3431067 . - 0 ID=cds-NDY24_15130;Parent=gene-NDY24_15130;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038464.1;locus_tag=NDY24_15130;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3431124 3431747 . - . ID=gene-NDY24_15135;Name=NDY24_15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15135 CP098602.1 Protein Homology CDS 3431124 3431747 . - 0 ID=cds-UUE97230.1;Parent=gene-NDY24_15135;Dbxref=NCBI_GP:UUE97230.1;Name=UUE97230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449297.1;locus_tag=NDY24_15135;product=SGNH/GDSL hydrolase family protein;protein_id=UUE97230.1;transl_table=11 CP098602.1 Genbank pseudogene 3431747 3433019 . - . ID=gene-NDY24_15140;Name=NDY24_15140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_15140;pseudo=true CP098602.1 Protein Homology CDS 3431747 3433019 . - 0 ID=cds-NDY24_15140;Parent=gene-NDY24_15140;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902304.1;locus_tag=NDY24_15140;product=pyridoxal phosphate-dependent aminotransferase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3433173 3434264 . + . ID=gene-NDY24_15145;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=NDY24_15145 CP098602.1 Protein Homology CDS 3433173 3434264 . + 0 ID=cds-UUE97231.1;Parent=gene-NDY24_15145;Dbxref=NCBI_GP:UUE97231.1;Name=UUE97231.1;Ontology_term=GO:0006412,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038460.1;locus_tag=NDY24_15145;product=ribosome small subunit-dependent GTPase A;protein_id=UUE97231.1;transl_table=11 CP098602.1 Genbank gene 3434266 3435528 . + . ID=gene-NDY24_15150;Name=NDY24_15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15150 CP098602.1 Protein Homology CDS 3434266 3435528 . + 0 ID=cds-UUE97232.1;Parent=gene-NDY24_15150;Dbxref=NCBI_GP:UUE97232.1;Name=UUE97232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365514.1;locus_tag=NDY24_15150;product=flavohemoglobin expression-modulating QEGLA motif protein;protein_id=UUE97232.1;transl_table=11 CP098602.1 Genbank gene 3435652 3435725 . + . ID=gene-NDY24_15155;Name=NDY24_15155;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_15155 CP098602.1 cmsearch ncRNA 3435652 3435725 . + . ID=rna-NDY24_15155;Parent=gene-NDY24_15155;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_15155;product=sX9 sRNA CP098602.1 cmsearch exon 3435652 3435725 . + . ID=exon-NDY24_15155-1;Parent=rna-NDY24_15155;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_15155;product=sX9 sRNA CP098602.1 Genbank gene 3435900 3436580 . + . ID=gene-NDY24_15160;Name=NDY24_15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15160 CP098602.1 Protein Homology CDS 3435900 3436580 . + 0 ID=cds-UUE97233.1;Parent=gene-NDY24_15160;Dbxref=NCBI_GP:UUE97233.1;Name=UUE97233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157539.1;locus_tag=NDY24_15160;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=UUE97233.1;transl_table=11 CP098602.1 Genbank gene 3436645 3436721 . - . ID=gene-NDY24_15165;Name=NDY24_15165;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_15165 CP098602.1 cmsearch ncRNA 3436645 3436721 . - . ID=rna-NDY24_15165;Parent=gene-NDY24_15165;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_15165;product=sX9 sRNA CP098602.1 cmsearch exon 3436645 3436721 . - . ID=exon-NDY24_15165-1;Parent=rna-NDY24_15165;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_15165;product=sX9 sRNA CP098602.1 Genbank gene 3437070 3438989 . - . ID=gene-NDY24_15170;Name=NDY24_15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15170 CP098602.1 Protein Homology CDS 3437070 3438989 . - 0 ID=cds-UUE97234.1;Parent=gene-NDY24_15170;Dbxref=NCBI_GP:UUE97234.1;Name=UUE97234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365510.1;locus_tag=NDY24_15170;product=alpha-amylase family protein;protein_id=UUE97234.1;transl_table=11 CP098602.1 Genbank gene 3439024 3441477 . - . ID=gene-NDY24_15175;Name=NDY24_15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15175 CP098602.1 Protein Homology CDS 3439024 3441477 . - 0 ID=cds-UUE97235.1;Parent=gene-NDY24_15175;Dbxref=NCBI_GP:UUE97235.1;Name=UUE97235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174521.1;locus_tag=NDY24_15175;product=TonB-dependent receptor;protein_id=UUE97235.1;transl_table=11 CP098602.1 Genbank gene 3441745 3443064 . + . ID=gene-NDY24_15180;Name=NDY24_15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15180 CP098602.1 Protein Homology CDS 3441745 3443064 . + 0 ID=cds-UUE97236.1;Parent=gene-NDY24_15180;Dbxref=NCBI_GP:UUE97236.1;Name=UUE97236.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849121.1;locus_tag=NDY24_15180;product=MFS transporter;protein_id=UUE97236.1;transl_table=11 CP098602.1 Genbank gene 3443548 3444579 . - . ID=gene-NDY24_15185;Name=NDY24_15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15185 CP098602.1 Protein Homology CDS 3443548 3444579 . - 0 ID=cds-UUE97237.1;Parent=gene-NDY24_15185;Dbxref=NCBI_GP:UUE97237.1;Name=UUE97237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005932772.1;locus_tag=NDY24_15185;product=LacI family DNA-binding transcriptional regulator;protein_id=UUE97237.1;transl_table=11 CP098602.1 Genbank gene 3444817 3445557 . - . ID=gene-NDY24_15190;Name=phbB;gbkey=Gene;gene=phbB;gene_biotype=protein_coding;locus_tag=NDY24_15190 CP098602.1 Protein Homology CDS 3444817 3445557 . - 0 ID=cds-UUE97238.1;Parent=gene-NDY24_15190;Dbxref=NCBI_GP:UUE97238.1;Name=UUE97238.1;Ontology_term=GO:0042619,GO:0018454;gbkey=CDS;gene=phbB;go_function=acetoacetyl-CoA reductase activity|0018454||IEA;go_process=poly-hydroxybutyrate biosynthetic process|0042619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006391443.1;locus_tag=NDY24_15190;product=acetoacetyl-CoA reductase;protein_id=UUE97238.1;transl_table=11 CP098602.1 Genbank gene 3445731 3447059 . - . ID=gene-NDY24_15195;Name=NDY24_15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15195 CP098602.1 Protein Homology CDS 3445731 3447059 . - 0 ID=cds-UUE97239.1;Parent=gene-NDY24_15195;Dbxref=NCBI_GP:UUE97239.1;Name=UUE97239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483418.1;locus_tag=NDY24_15195;product=CitMHS family transporter;protein_id=UUE97239.1;transl_table=11 CP098602.1 Genbank gene 3447174 3448367 . - . ID=gene-NDY24_15200;Name=NDY24_15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15200 CP098602.1 Protein Homology CDS 3447174 3448367 . - 0 ID=cds-UUE97240.1;Parent=gene-NDY24_15200;Dbxref=NCBI_GP:UUE97240.1;Name=UUE97240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157498.1;locus_tag=NDY24_15200;product=porin;protein_id=UUE97240.1;transl_table=11 CP098602.1 Genbank gene 3448645 3449346 . + . ID=gene-NDY24_15205;Name=NDY24_15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15205 CP098602.1 Protein Homology CDS 3448645 3449346 . + 0 ID=cds-UUE97241.1;Parent=gene-NDY24_15205;Dbxref=NCBI_GP:UUE97241.1;Name=UUE97241.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163399.1;locus_tag=NDY24_15205;product=response regulator;protein_id=UUE97241.1;transl_table=11 CP098602.1 Genbank gene 3449339 3450724 . + . ID=gene-NDY24_15210;Name=NDY24_15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15210 CP098602.1 Protein Homology CDS 3449339 3450724 . + 0 ID=cds-UUE97242.1;Parent=gene-NDY24_15210;Dbxref=NCBI_GP:UUE97242.1;Name=UUE97242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453222.1;locus_tag=NDY24_15210;product=sensor histidine kinase N-terminal domain-containing protein;protein_id=UUE97242.1;transl_table=11 CP098602.1 Genbank gene 3450724 3451773 . + . ID=gene-NDY24_15215;Name=NDY24_15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15215 CP098602.1 Protein Homology CDS 3450724 3451773 . + 0 ID=cds-UUE97243.1;Parent=gene-NDY24_15215;Dbxref=NCBI_GP:UUE97243.1;Name=UUE97243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483407.1;locus_tag=NDY24_15215;product=ABC transporter substrate-binding protein;protein_id=UUE97243.1;transl_table=11 CP098602.1 Genbank gene 3451966 3452604 . + . ID=gene-NDY24_15220;Name=NDY24_15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15220 CP098602.1 Protein Homology CDS 3451966 3452604 . + 0 ID=cds-UUE97244.1;Parent=gene-NDY24_15220;Dbxref=NCBI_GP:UUE97244.1;Name=UUE97244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257949.1;locus_tag=NDY24_15220;product=response regulator transcription factor;protein_id=UUE97244.1;transl_table=11 CP098602.1 Genbank gene 3452719 3454839 . - . ID=gene-NDY24_15225;Name=NDY24_15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15225 CP098602.1 Protein Homology CDS 3452719 3454839 . - 0 ID=cds-UUE97245.1;Parent=gene-NDY24_15225;Dbxref=NCBI_GP:UUE97245.1;Name=UUE97245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449796.1;locus_tag=NDY24_15225;product=TonB-dependent receptor;protein_id=UUE97245.1;transl_table=11 CP098602.1 Genbank gene 3455202 3456104 . + . ID=gene-NDY24_15230;Name=NDY24_15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15230 CP098602.1 Protein Homology CDS 3455202 3456104 . + 0 ID=cds-UUE97246.1;Parent=gene-NDY24_15230;Dbxref=NCBI_GP:UUE97246.1;Name=UUE97246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159489.1;locus_tag=NDY24_15230;product=LysR family transcriptional regulator;protein_id=UUE97246.1;transl_table=11 CP098602.1 Genbank gene 3456096 3456863 . - . ID=gene-NDY24_15235;Name=NDY24_15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15235 CP098602.1 Protein Homology CDS 3456096 3456863 . - 0 ID=cds-UUF00429.1;Parent=gene-NDY24_15235;Dbxref=NCBI_GP:UUF00429.1;Name=UUF00429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157489.1;locus_tag=NDY24_15235;product=substrate-binding domain-containing protein;protein_id=UUF00429.1;transl_table=11 CP098602.1 Genbank gene 3456872 3458221 . - . ID=gene-NDY24_15240;Name=NDY24_15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15240 CP098602.1 Protein Homology CDS 3456872 3458221 . - 0 ID=cds-UUE97247.1;Parent=gene-NDY24_15240;Dbxref=NCBI_GP:UUE97247.1;Name=UUE97247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157488.1;locus_tag=NDY24_15240;product=MFS transporter;protein_id=UUE97247.1;transl_table=11 CP098602.1 Genbank gene 3458435 3459355 . - . ID=gene-NDY24_15245;Name=NDY24_15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15245 CP098602.1 Protein Homology CDS 3458435 3459355 . - 0 ID=cds-UUE97248.1;Parent=gene-NDY24_15245;Dbxref=NCBI_GP:UUE97248.1;Name=UUE97248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449795.1;locus_tag=NDY24_15245;product=DUF1460 domain-containing protein;protein_id=UUE97248.1;transl_table=11 CP098602.1 Genbank gene 3459390 3462035 . - . ID=gene-NDY24_15250;Name=NDY24_15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15250 CP098602.1 Protein Homology CDS 3459390 3462035 . - 0 ID=cds-UUE97249.1;Parent=gene-NDY24_15250;Dbxref=NCBI_GP:UUE97249.1;Name=UUE97249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160257.1;locus_tag=NDY24_15250;product=PAS-domain containing protein;protein_id=UUE97249.1;transl_table=11 CP098602.1 Genbank gene 3462274 3463464 . - . ID=gene-NDY24_15255;Name=NDY24_15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15255 CP098602.1 Protein Homology CDS 3462274 3463464 . - 0 ID=cds-UUE97250.1;Parent=gene-NDY24_15255;Dbxref=NCBI_GP:UUE97250.1;Name=UUE97250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257958.1;locus_tag=NDY24_15255;product=porin;protein_id=UUE97250.1;transl_table=11 CP098602.1 Genbank pseudogene 3463733 3465080 . + . ID=gene-NDY24_15260;Name=NDY24_15260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_15260;pseudo=true CP098602.1 Protein Homology CDS 3463733 3465080 . + 0 ID=cds-NDY24_15260;Parent=gene-NDY24_15260;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038444.1;locus_tag=NDY24_15260;product=dicarboxylate/amino acid:cation symporter;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3465280 3467589 . + . ID=gene-NDY24_15265;Name=NDY24_15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15265 CP098602.1 Protein Homology CDS 3465280 3467589 . + 0 ID=cds-UUE97251.1;Parent=gene-NDY24_15265;Dbxref=NCBI_GP:UUE97251.1;Name=UUE97251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449791.1;locus_tag=NDY24_15265;product=NADP-dependent malic enzyme;protein_id=UUE97251.1;transl_table=11 CP098602.1 Genbank pseudogene 3468072 3471470 . - . ID=gene-NDY24_15270;Name=NDY24_15270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_15270;pseudo=true CP098602.1 Protein Homology CDS 3468072 3471470 . - 0 ID=cds-NDY24_15270;Parent=gene-NDY24_15270;Note=frameshifted;Ontology_term=GO:0005975,GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172308.1;locus_tag=NDY24_15270;product=GH92 family glycosyl hydrolase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3471812 3472009 . + . ID=gene-NDY24_15275;Name=NDY24_15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15275 CP098602.1 Protein Homology CDS 3471812 3472009 . + 0 ID=cds-UUE97252.1;Parent=gene-NDY24_15275;Dbxref=NCBI_GP:UUE97252.1;Name=UUE97252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483377.1;locus_tag=NDY24_15275;product=zinc-finger domain-containing protein;protein_id=UUE97252.1;transl_table=11 CP098602.1 Genbank gene 3472020 3473132 . + . ID=gene-NDY24_15280;Name=NDY24_15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15280 CP098602.1 Protein Homology CDS 3472020 3473132 . + 0 ID=cds-UUE97253.1;Parent=gene-NDY24_15280;Dbxref=NCBI_GP:UUE97253.1;Name=UUE97253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483375.1;locus_tag=NDY24_15280;product=glycosyltransferase;protein_id=UUE97253.1;transl_table=11 CP098602.1 Genbank gene 3473113 3474447 . + . ID=gene-NDY24_15285;Name=NDY24_15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15285 CP098602.1 Protein Homology CDS 3473113 3474447 . + 0 ID=cds-UUE97254.1;Parent=gene-NDY24_15285;Dbxref=NCBI_GP:UUE97254.1;Name=UUE97254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257795.1;locus_tag=NDY24_15285;product=O-antigen ligase family protein;protein_id=UUE97254.1;transl_table=11 CP098602.1 Genbank gene 3474639 3475559 . - . ID=gene-NDY24_15290;Name=NDY24_15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15290 CP098602.1 Protein Homology CDS 3474639 3475559 . - 0 ID=cds-UUE97255.1;Parent=gene-NDY24_15290;Dbxref=NCBI_GP:UUE97255.1;Name=UUE97255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967748.1;locus_tag=NDY24_15290;product=LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase;protein_id=UUE97255.1;transl_table=11 CP098602.1 Genbank gene 3475636 3476961 . + . ID=gene-NDY24_15295;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=NDY24_15295 CP098602.1 Protein Homology CDS 3475636 3476961 . + 0 ID=cds-UUF00430.1;Parent=gene-NDY24_15295;Dbxref=NCBI_GP:UUF00430.1;Name=UUF00430.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038436.1;locus_tag=NDY24_15295;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=UUF00430.1;transl_table=11 CP098602.1 Genbank pseudogene 3477572 3478946 . - . ID=gene-NDY24_15300;Name=NDY24_15300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_15300;pseudo=true CP098602.1 Protein Homology CDS 3477572 3478946 . - 0 ID=cds-NDY24_15300;Parent=gene-NDY24_15300;Note=frameshifted;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364366.1;locus_tag=NDY24_15300;product=TolC family outer membrane protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3478967 3479623 . - . ID=gene-NDY24_15305;Name=NDY24_15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15305 CP098602.1 Protein Homology CDS 3478967 3479623 . - 0 ID=cds-UUE97256.1;Parent=gene-NDY24_15305;Dbxref=NCBI_GP:UUE97256.1;Name=UUE97256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804883.1;locus_tag=NDY24_15305;product=protein-L-isoaspartate O-methyltransferase;protein_id=UUE97256.1;transl_table=11 CP098602.1 Genbank gene 3479752 3480405 . - . ID=gene-NDY24_15310;Name=NDY24_15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15310 CP098602.1 Protein Homology CDS 3479752 3480405 . - 0 ID=cds-UUF00431.1;Parent=gene-NDY24_15310;Dbxref=NCBI_GP:UUF00431.1;Name=UUF00431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167389.1;locus_tag=NDY24_15310;product=TetR/AcrR family transcriptional regulator;protein_id=UUF00431.1;transl_table=11 CP098602.1 Genbank gene 3480692 3483706 . + . ID=gene-NDY24_15315;Name=NDY24_15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15315 CP098602.1 Protein Homology CDS 3480692 3483706 . + 0 ID=cds-UUE97257.1;Parent=gene-NDY24_15315;Dbxref=NCBI_GP:UUE97257.1;Name=UUE97257.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508891.1;locus_tag=NDY24_15315;product=diguanylate cyclase;protein_id=UUE97257.1;transl_table=11 CP098602.1 Genbank gene 3483710 3484594 . - . ID=gene-NDY24_15320;Name=NDY24_15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15320 CP098602.1 Protein Homology CDS 3483710 3484594 . - 0 ID=cds-UUE97258.1;Parent=gene-NDY24_15320;Dbxref=NCBI_GP:UUE97258.1;Name=UUE97258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117063.1;locus_tag=NDY24_15320;product=LysR family transcriptional regulator;protein_id=UUE97258.1;transl_table=11 CP098602.1 Genbank gene 3484714 3486162 . + . ID=gene-NDY24_15325;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=NDY24_15325 CP098602.1 Protein Homology CDS 3484714 3486162 . + 0 ID=cds-UUE97259.1;Parent=gene-NDY24_15325;Dbxref=NCBI_GP:UUE97259.1;Name=UUE97259.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091005.1;locus_tag=NDY24_15325;product=3-isopropylmalate dehydratase large subunit;protein_id=UUE97259.1;transl_table=11 CP098602.1 Genbank gene 3486229 3486876 . + . ID=gene-NDY24_15330;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=NDY24_15330 CP098602.1 Protein Homology CDS 3486229 3486876 . + 0 ID=cds-UUE97260.1;Parent=gene-NDY24_15330;Dbxref=NCBI_GP:UUE97260.1;Name=UUE97260.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301096.1;locus_tag=NDY24_15330;product=3-isopropylmalate dehydratase small subunit;protein_id=UUE97260.1;transl_table=11 CP098602.1 Genbank gene 3486873 3487658 . + . ID=gene-NDY24_15335;Name=NDY24_15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15335 CP098602.1 Protein Homology CDS 3486873 3487658 . + 0 ID=cds-UUE97261.1;Parent=gene-NDY24_15335;Dbxref=NCBI_GP:UUE97261.1;Name=UUE97261.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451160.1;locus_tag=NDY24_15335;product=methyltransferase domain-containing protein;protein_id=UUE97261.1;transl_table=11 CP098602.1 Genbank gene 3487696 3488769 . + . ID=gene-NDY24_15340;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=NDY24_15340 CP098602.1 Protein Homology CDS 3487696 3488769 . + 0 ID=cds-UUE97262.1;Parent=gene-NDY24_15340;Dbxref=NCBI_GP:UUE97262.1;Name=UUE97262.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912018.1;locus_tag=NDY24_15340;product=3-isopropylmalate dehydrogenase;protein_id=UUE97262.1;transl_table=11 CP098602.1 Genbank gene 3489471 3491033 . - . ID=gene-NDY24_15345;Name=NDY24_15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15345 CP098602.1 Protein Homology CDS 3489471 3491033 . - 0 ID=cds-UUE97263.1;Parent=gene-NDY24_15345;Dbxref=NCBI_GP:UUE97263.1;Name=UUE97263.1;Ontology_term=GO:0009098,GO:0019752,GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=leucine biosynthetic process|0009098||IEA,carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156818.1;locus_tag=NDY24_15345;product=2-isopropylmalate synthase;protein_id=UUE97263.1;transl_table=11 CP098602.1 Genbank gene 3491030 3492100 . - . ID=gene-NDY24_15350;Name=NDY24_15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15350 CP098602.1 Protein Homology CDS 3491030 3492100 . - 0 ID=cds-UUF00432.1;Parent=gene-NDY24_15350;Dbxref=NCBI_GP:UUF00432.1;Name=UUF00432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912014.1;locus_tag=NDY24_15350;product=threonine dehydratase;protein_id=UUF00432.1;transl_table=11 CP098602.1 Genbank gene 3492239 3492496 . - . ID=gene-NDY24_15355;Name=NDY24_15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15355 CP098602.1 Protein Homology CDS 3492239 3492496 . - 0 ID=cds-UUE97264.1;Parent=gene-NDY24_15355;Dbxref=NCBI_GP:UUE97264.1;Name=UUE97264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504505.1;locus_tag=NDY24_15355;product=acetolactate synthase;protein_id=UUE97264.1;transl_table=11 CP098602.1 Genbank gene 3492480 3494201 . - . ID=gene-NDY24_15360;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=NDY24_15360 CP098602.1 Protein Homology CDS 3492480 3494201 . - 0 ID=cds-UUF00433.1;Parent=gene-NDY24_15360;Dbxref=NCBI_GP:UUF00433.1;Name=UUF00433.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804901.1;locus_tag=NDY24_15360;product=acetolactate synthase 2 catalytic subunit;protein_id=UUF00433.1;transl_table=11 CP098602.1 Genbank pseudogene 3494247 3495245 . - . ID=gene-NDY24_15365;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=pseudogene;locus_tag=NDY24_15365;pseudo=true CP098602.1 Protein Homology CDS 3494247 3495245 . - 0 ID=cds-NDY24_15365;Parent=gene-NDY24_15365;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504503.1;locus_tag=NDY24_15365;product=ketol-acid reductoisomerase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 3495891 3497601 . + . ID=gene-NDY24_15370;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=pseudogene;locus_tag=NDY24_15370;pseudo=true CP098602.1 Protein Homology CDS 3495891 3497601 . + 0 ID=cds-NDY24_15370;Parent=gene-NDY24_15370;Note=frameshifted;Ontology_term=GO:0006750;gbkey=CDS;gene=ggt;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052288.1;locus_tag=NDY24_15370;product=gamma-glutamyltransferase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3497682 3499520 . + . ID=gene-NDY24_15375;Name=NDY24_15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15375 CP098602.1 Protein Homology CDS 3497682 3499520 . + 0 ID=cds-UUE97265.1;Parent=gene-NDY24_15375;Dbxref=NCBI_GP:UUE97265.1;Name=UUE97265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967728.1;locus_tag=NDY24_15375;product=methyl-accepting chemotaxis protein;protein_id=UUE97265.1;transl_table=11 CP098602.1 Genbank gene 3499790 3502561 . - . ID=gene-NDY24_15380;Name=NDY24_15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15380 CP098602.1 Protein Homology CDS 3499790 3502561 . - 0 ID=cds-UUF00434.1;Parent=gene-NDY24_15380;Dbxref=NCBI_GP:UUF00434.1;Name=UUF00434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017173610.1;locus_tag=NDY24_15380;product=TonB-dependent receptor;protein_id=UUF00434.1;transl_table=11 CP098602.1 cmsearch riboswitch 3502866 3502963 . + . ID=id-CP098602.1:3502866..3502963;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP098602.1 Genbank gene 3503079 3504956 . + . ID=gene-NDY24_15385;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=NDY24_15385 CP098602.1 Protein Homology CDS 3503079 3504956 . + 0 ID=cds-UUE97266.1;Parent=gene-NDY24_15385;Dbxref=NCBI_GP:UUE97266.1;Name=UUE97266.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407693.1;locus_tag=NDY24_15385;product=phosphomethylpyrimidine synthase ThiC;protein_id=UUE97266.1;transl_table=11 CP098602.1 Genbank pseudogene 3505381 3507717 . + . ID=gene-NDY24_15390;Name=NDY24_15390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_15390;pseudo=true CP098602.1 Protein Homology CDS 3505381 3507717 . + 0 ID=cds-NDY24_15390;Parent=gene-NDY24_15390;Note=internal stop;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364401.1;locus_tag=NDY24_15390;product=winged helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3507828 3508721 . + . ID=gene-NDY24_15395;Name=NDY24_15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15395 CP098602.1 Protein Homology CDS 3507828 3508721 . + 0 ID=cds-UUE97267.1;Parent=gene-NDY24_15395;Dbxref=NCBI_GP:UUE97267.1;Name=UUE97267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573718.1;locus_tag=NDY24_15395;product=AraC family transcriptional regulator;protein_id=UUE97267.1;transl_table=11 CP098602.1 Genbank gene 3508770 3511658 . + . ID=gene-NDY24_15400;Name=NDY24_15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15400 CP098602.1 Protein Homology CDS 3508770 3511658 . + 0 ID=cds-UUE97268.1;Parent=gene-NDY24_15400;Dbxref=NCBI_GP:UUE97268.1;Name=UUE97268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005990845.1;locus_tag=NDY24_15400;product=TonB-dependent receptor;protein_id=UUE97268.1;transl_table=11 CP098602.1 Genbank gene 3511983 3513131 . - . ID=gene-NDY24_15405;Name=NDY24_15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15405 CP098602.1 Protein Homology CDS 3511983 3513131 . - 0 ID=cds-UUE97269.1;Parent=gene-NDY24_15405;Dbxref=NCBI_GP:UUE97269.1;Name=UUE97269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504498.1;locus_tag=NDY24_15405;product=HDOD domain-containing protein;protein_id=UUE97269.1;transl_table=11 CP098602.1 Genbank gene 3513245 3513781 . - . ID=gene-NDY24_15410;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=NDY24_15410 CP098602.1 Protein Homology CDS 3513245 3513781 . - 0 ID=cds-UUE97270.1;Parent=gene-NDY24_15410;Dbxref=NCBI_GP:UUE97270.1;Name=UUE97270.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019183821.1;locus_tag=NDY24_15410;product=inorganic diphosphatase;protein_id=UUE97270.1;transl_table=11 CP098602.1 Genbank gene 3513978 3514460 . + . ID=gene-NDY24_15415;Name=NDY24_15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15415 CP098602.1 Protein Homology CDS 3513978 3514460 . + 0 ID=cds-UUF00435.1;Parent=gene-NDY24_15415;Dbxref=NCBI_GP:UUF00435.1;Name=UUF00435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158947.1;locus_tag=NDY24_15415;product=hypothetical protein;protein_id=UUF00435.1;transl_table=11 CP098602.1 Genbank gene 3514656 3516683 . - . ID=gene-NDY24_15420;Name=NDY24_15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15420 CP098602.1 Protein Homology CDS 3514656 3516683 . - 0 ID=cds-UUE97271.1;Parent=gene-NDY24_15420;Dbxref=NCBI_GP:UUE97271.1;Name=UUE97271.1;Ontology_term=GO:1902600,GO:0009678;gbkey=CDS;go_function=pyrophosphate hydrolysis-driven proton transmembrane transporter activity|0009678||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038412.1;locus_tag=NDY24_15420;product=sodium-translocating pyrophosphatase;protein_id=UUE97271.1;transl_table=11 CP098602.1 Genbank pseudogene 3516935 3517460 . + . ID=gene-NDY24_15425;Name=NDY24_15425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_15425;pseudo=true CP098602.1 Protein Homology CDS 3516935 3517460 . + 0 ID=cds-NDY24_15425;Parent=gene-NDY24_15425;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348509.1;locus_tag=NDY24_15425;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3517748 3519004 . - . ID=gene-NDY24_15430;Name=NDY24_15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15430 CP098602.1 Protein Homology CDS 3517748 3519004 . - 0 ID=cds-UUE97272.1;Parent=gene-NDY24_15430;Dbxref=NCBI_GP:UUE97272.1;Name=UUE97272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504490.1;locus_tag=NDY24_15430;product=6-phosphofructokinase;protein_id=UUE97272.1;transl_table=11 CP098602.1 Genbank gene 3519162 3519725 . + . ID=gene-NDY24_15435;Name=NDY24_15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15435 CP098602.1 Protein Homology CDS 3519162 3519725 . + 0 ID=cds-UUE97273.1;Parent=gene-NDY24_15435;Dbxref=NCBI_GP:UUE97273.1;Name=UUE97273.1;Ontology_term=GO:0006139,GO:0005524,GO:0019205;gbkey=CDS;go_function=ATP binding|0005524||IEA,nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364422.1;locus_tag=NDY24_15435;product=adenylate kinase;protein_id=UUE97273.1;transl_table=11 CP098602.1 Genbank gene 3520087 3521454 . + . ID=gene-NDY24_15440;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=NDY24_15440 CP098602.1 Protein Homology CDS 3520087 3521454 . + 0 ID=cds-UUE97274.1;Parent=gene-NDY24_15440;Dbxref=NCBI_GP:UUE97274.1;Name=UUE97274.1;Ontology_term=GO:0009252,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017164849.1;locus_tag=NDY24_15440;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=UUE97274.1;transl_table=11 CP098602.1 Genbank gene 3521454 3522050 . + . ID=gene-NDY24_15445;Name=NDY24_15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15445 CP098602.1 Protein Homology CDS 3521454 3522050 . + 0 ID=cds-UUE97275.1;Parent=gene-NDY24_15445;Dbxref=NCBI_GP:UUE97275.1;Name=UUE97275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451257.1;locus_tag=NDY24_15445;product=LON peptidase substrate-binding domain-containing protein;protein_id=UUE97275.1;transl_table=11 CP098602.1 Genbank gene 3522197 3523081 . + . ID=gene-NDY24_15450;Name=NDY24_15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15450 CP098602.1 Protein Homology CDS 3522197 3523081 . + 0 ID=cds-UUE97276.1;Parent=gene-NDY24_15450;Dbxref=NCBI_GP:UUE97276.1;Name=UUE97276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364428.1;locus_tag=NDY24_15450;product=hypothetical protein;protein_id=UUE97276.1;transl_table=11 CP098602.1 Genbank gene 3523903 3525990 . - . ID=gene-NDY24_15455;Name=NDY24_15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15455 CP098602.1 Protein Homology CDS 3523903 3525990 . - 0 ID=cds-UUE97277.1;Parent=gene-NDY24_15455;Dbxref=NCBI_GP:UUE97277.1;Name=UUE97277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165840.1;locus_tag=NDY24_15455;product=VTT domain-containing protein;protein_id=UUE97277.1;transl_table=11 CP098602.1 Genbank gene 3526153 3526812 . + . ID=gene-NDY24_15460;Name=NDY24_15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15460 CP098602.1 Protein Homology CDS 3526153 3526812 . + 0 ID=cds-UUE97278.1;Parent=gene-NDY24_15460;Dbxref=NCBI_GP:UUE97278.1;Name=UUE97278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303234.1;locus_tag=NDY24_15460;product=serine/threonine-protein kinase;protein_id=UUE97278.1;transl_table=11 CP098602.1 Genbank gene 3526922 3527884 . - . ID=gene-NDY24_15465;Name=NDY24_15465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15465 CP098602.1 Protein Homology CDS 3526922 3527884 . - 0 ID=cds-UUE97279.1;Parent=gene-NDY24_15465;Dbxref=NCBI_GP:UUE97279.1;Name=UUE97279.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037261.1;locus_tag=NDY24_15465;product=IS1595 family transposase;protein_id=UUE97279.1;transl_table=11 CP098602.1 Genbank gene 3528021 3528836 . + . ID=gene-NDY24_15470;Name=NDY24_15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15470 CP098602.1 Protein Homology CDS 3528021 3528836 . + 0 ID=cds-UUE97280.1;Parent=gene-NDY24_15470;Dbxref=NCBI_GP:UUE97280.1;Name=UUE97280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903011.1;locus_tag=NDY24_15470;product=NAD(P)-dependent oxidoreductase;protein_id=UUE97280.1;transl_table=11 CP098602.1 Genbank gene 3529054 3530034 . + . ID=gene-NDY24_15475;Name=NDY24_15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15475 CP098602.1 Protein Homology CDS 3529054 3530034 . + 0 ID=cds-UUE97281.1;Parent=gene-NDY24_15475;Dbxref=NCBI_GP:UUE97281.1;Name=UUE97281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009603396.1;locus_tag=NDY24_15475;product=YiiG family protein;protein_id=UUE97281.1;transl_table=11 CP098602.1 Genbank gene 3530144 3531085 . + . ID=gene-NDY24_15480;Name=NDY24_15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15480 CP098602.1 Protein Homology CDS 3530144 3531085 . + 0 ID=cds-UUE97282.1;Parent=gene-NDY24_15480;Dbxref=NCBI_GP:UUE97282.1;Name=UUE97282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448833.1;locus_tag=NDY24_15480;product=YiiG family protein;protein_id=UUE97282.1;transl_table=11 CP098602.1 Genbank gene 3531641 3532513 . - . ID=gene-NDY24_15485;Name=NDY24_15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15485 CP098602.1 Protein Homology CDS 3531641 3532513 . - 0 ID=cds-UUE97283.1;Parent=gene-NDY24_15485;Dbxref=NCBI_GP:UUE97283.1;Name=UUE97283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911973.1;locus_tag=NDY24_15485;product=ion transporter;protein_id=UUE97283.1;transl_table=11 CP098602.1 Genbank gene 3532586 3533812 . + . ID=gene-NDY24_15490;Name=NDY24_15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15490 CP098602.1 Protein Homology CDS 3532586 3533812 . + 0 ID=cds-UUE97284.1;Parent=gene-NDY24_15490;Dbxref=NCBI_GP:UUE97284.1;Name=UUE97284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451204.1;locus_tag=NDY24_15490;product=acetylornithine transaminase;protein_id=UUE97284.1;transl_table=11 CP098602.1 Genbank gene 3533921 3534541 . - . ID=gene-NDY24_15495;Name=NDY24_15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15495 CP098602.1 Protein Homology CDS 3533921 3534541 . - 0 ID=cds-UUE97285.1;Parent=gene-NDY24_15495;Dbxref=NCBI_GP:UUE97285.1;Name=UUE97285.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008577886.1;locus_tag=NDY24_15495;product=HAD-IA family hydrolase;protein_id=UUE97285.1;transl_table=11 CP098602.1 Genbank gene 3534826 3537120 . + . ID=gene-NDY24_15500;Name=NDY24_15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15500 CP098602.1 Protein Homology CDS 3534826 3537120 . + 0 ID=cds-UUE97286.1;Parent=gene-NDY24_15500;Dbxref=NCBI_GP:UUE97286.1;Name=UUE97286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038381.1;locus_tag=NDY24_15500;product=TonB-dependent receptor;protein_id=UUE97286.1;transl_table=11 CP098602.1 Genbank gene 3537208 3538815 . + . ID=gene-NDY24_15505;Name=NDY24_15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15505 CP098602.1 Protein Homology CDS 3537208 3538815 . + 0 ID=cds-UUE97287.1;Parent=gene-NDY24_15505;Dbxref=NCBI_GP:UUE97287.1;Name=UUE97287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851068.1;locus_tag=NDY24_15505;product=flavin monoamine oxidase family protein;protein_id=UUE97287.1;transl_table=11 CP098602.1 Genbank gene 3538812 3539237 . + . ID=gene-NDY24_15510;Name=NDY24_15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15510 CP098602.1 Protein Homology CDS 3538812 3539237 . + 0 ID=cds-UUE97288.1;Parent=gene-NDY24_15510;Dbxref=NCBI_GP:UUE97288.1;Name=UUE97288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504474.1;locus_tag=NDY24_15510;product=cytochrome c;protein_id=UUE97288.1;transl_table=11 CP098602.1 Genbank gene 3539266 3539769 . + . ID=gene-NDY24_15515;Name=NDY24_15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15515 CP098602.1 Protein Homology CDS 3539266 3539769 . + 0 ID=cds-UUE97289.1;Parent=gene-NDY24_15515;Dbxref=NCBI_GP:UUE97289.1;Name=UUE97289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348483.1;locus_tag=NDY24_15515;product=RidA family protein;protein_id=UUE97289.1;transl_table=11 CP098602.1 Genbank gene 3539800 3541002 . + . ID=gene-NDY24_15520;Name=NDY24_15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15520 CP098602.1 Protein Homology CDS 3539800 3541002 . + 0 ID=cds-UUE97290.1;Parent=gene-NDY24_15520;Dbxref=NCBI_GP:UUE97290.1;Name=UUE97290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005926874.1;locus_tag=NDY24_15520;product=pyridoxal phosphate-dependent aminotransferase;protein_id=UUE97290.1;transl_table=11 CP098602.1 Genbank gene 3541094 3541543 . + . ID=gene-NDY24_15525;Name=azu;gbkey=Gene;gene=azu;gene_biotype=protein_coding;locus_tag=NDY24_15525 CP098602.1 Protein Homology CDS 3541094 3541543 . + 0 ID=cds-UUE97291.1;Parent=gene-NDY24_15525;Dbxref=NCBI_GP:UUE97291.1;Name=UUE97291.1;Ontology_term=GO:0005507,GO:0009055;gbkey=CDS;gene=azu;go_function=copper ion binding|0005507||IEA,electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851071.1;locus_tag=NDY24_15525;product=azurin;protein_id=UUE97291.1;transl_table=11 CP098602.1 Genbank pseudogene 3541661 3544399 . - . ID=gene-NDY24_15530;Name=NDY24_15530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_15530;pseudo=true CP098602.1 Protein Homology CDS 3541661 3544399 . - 0 ID=cds-NDY24_15530;Parent=gene-NDY24_15530;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156847.1;locus_tag=NDY24_15530;product=LuxR C-terminal-related transcriptional regulator;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3544649 3545938 . - . ID=gene-NDY24_15535;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=NDY24_15535 CP098602.1 Protein Homology CDS 3544649 3545938 . - 0 ID=cds-UUE97292.1;Parent=gene-NDY24_15535;Dbxref=NCBI_GP:UUE97292.1;Name=UUE97292.1;Ontology_term=GO:0006779,GO:0042286,GO:0005737;gbkey=CDS;gene=hemL;go_component=cytoplasm|0005737||IEA;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052264.1;locus_tag=NDY24_15535;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=UUE97292.1;transl_table=11 CP098602.1 Genbank gene 3546246 3549422 . + . ID=gene-NDY24_15540;Name=NDY24_15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15540 CP098602.1 Protein Homology CDS 3546246 3549422 . + 0 ID=cds-UUE97293.1;Parent=gene-NDY24_15540;Dbxref=NCBI_GP:UUE97293.1;Name=UUE97293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169557.1;locus_tag=NDY24_15540;product=TonB-dependent receptor;protein_id=UUE97293.1;transl_table=11 CP098602.1 Genbank gene 3550405 3551028 . - . ID=gene-NDY24_15545;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=NDY24_15545 CP098602.1 Protein Homology CDS 3550405 3551028 . - 0 ID=cds-UUE97294.1;Parent=gene-NDY24_15545;Dbxref=NCBI_GP:UUE97294.1;Name=UUE97294.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451384.1;locus_tag=NDY24_15545;product=thiamine phosphate synthase;protein_id=UUE97294.1;transl_table=11 CP098602.1 Genbank gene 3551052 3551291 . + . ID=gene-NDY24_15550;Name=NDY24_15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15550 CP098602.1 Protein Homology CDS 3551052 3551291 . + 0 ID=cds-UUE97295.1;Parent=gene-NDY24_15550;Dbxref=NCBI_GP:UUE97295.1;Name=UUE97295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156850.1;locus_tag=NDY24_15550;product=rubredoxin;protein_id=UUE97295.1;transl_table=11 CP098602.1 Genbank gene 3551389 3552270 . - . ID=gene-NDY24_15555;Name=NDY24_15555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15555 CP098602.1 Protein Homology CDS 3551389 3552270 . - 0 ID=cds-UUE97296.1;Parent=gene-NDY24_15555;Dbxref=NCBI_GP:UUE97296.1;Name=UUE97296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851075.1;locus_tag=NDY24_15555;product=SirB1 family protein;protein_id=UUE97296.1;transl_table=11 CP098602.1 Genbank gene 3552311 3552760 . - . ID=gene-NDY24_15560;Name=NDY24_15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15560 CP098602.1 Protein Homology CDS 3552311 3552760 . - 0 ID=cds-UUF00436.1;Parent=gene-NDY24_15560;Dbxref=NCBI_GP:UUF00436.1;Name=UUF00436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967674.1;locus_tag=NDY24_15560;product=DUF192 domain-containing protein;protein_id=UUF00436.1;transl_table=11 CP098602.1 Genbank gene 3552925 3553572 . - . ID=gene-NDY24_15565;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=NDY24_15565 CP098602.1 Protein Homology CDS 3552925 3553572 . - 0 ID=cds-UUE97297.1;Parent=gene-NDY24_15565;Dbxref=NCBI_GP:UUE97297.1;Name=UUE97297.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994531.1;locus_tag=NDY24_15565;product=ribose-5-phosphate isomerase RpiA;protein_id=UUE97297.1;transl_table=11 CP098602.1 Genbank gene 3553679 3554149 . - . ID=gene-NDY24_15570;Name=NDY24_15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15570 CP098602.1 Protein Homology CDS 3553679 3554149 . - 0 ID=cds-UUE97298.1;Parent=gene-NDY24_15570;Dbxref=NCBI_GP:UUE97298.1;Name=UUE97298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812469.1;locus_tag=NDY24_15570;product=EVE domain-containing protein;protein_id=UUE97298.1;transl_table=11 CP098602.1 Genbank pseudogene 3554146 3554736 . - . ID=gene-NDY24_15575;Name=NDY24_15575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_15575;pseudo=true CP098602.1 Protein Homology CDS 3554146 3554736 . - 0 ID=cds-NDY24_15575;Parent=gene-NDY24_15575;Note=internal stop;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451378.1;locus_tag=NDY24_15575;product=5-formyltetrahydrofolate cyclo-ligase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3554818 3555002 . - . ID=gene-NDY24_15580;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=NDY24_15580 CP098602.1 cmsearch ncRNA 3554818 3555002 . - . ID=rna-NDY24_15580;Parent=gene-NDY24_15580;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_15580;product=6S RNA CP098602.1 cmsearch exon 3554818 3555002 . - . ID=exon-NDY24_15580-1;Parent=rna-NDY24_15580;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_15580;product=6S RNA CP098602.1 Genbank gene 3555098 3555397 . - . ID=gene-NDY24_15585;Name=NDY24_15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15585 CP098602.1 Protein Homology CDS 3555098 3555397 . - 0 ID=cds-UUE97299.1;Parent=gene-NDY24_15585;Dbxref=NCBI_GP:UUE97299.1;Name=UUE97299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300828.1;locus_tag=NDY24_15585;product=cell division protein ZapA;protein_id=UUE97299.1;transl_table=11 CP098602.1 Genbank gene 3555394 3555615 . - . ID=gene-NDY24_15590;Name=NDY24_15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15590 CP098602.1 Protein Homology CDS 3555394 3555615 . - 0 ID=cds-UUF00437.1;Parent=gene-NDY24_15590;Dbxref=NCBI_GP:UUF00437.1;Name=UUF00437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812462.1;locus_tag=NDY24_15590;product=TIGR02449 family protein;protein_id=UUF00437.1;transl_table=11 CP098602.1 Genbank gene 3555853 3556395 . + . ID=gene-NDY24_15595;Name=NDY24_15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15595 CP098602.1 Protein Homology CDS 3555853 3556395 . + 0 ID=cds-UUE97300.1;Parent=gene-NDY24_15595;Dbxref=NCBI_GP:UUE97300.1;Name=UUE97300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156855.1;locus_tag=NDY24_15595;product=YecA family protein;protein_id=UUE97300.1;transl_table=11 CP098602.1 Genbank gene 3556409 3557740 . + . ID=gene-NDY24_15600;Name=NDY24_15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15600 CP098602.1 Protein Homology CDS 3556409 3557740 . + 0 ID=cds-UUE97301.1;Parent=gene-NDY24_15600;Dbxref=NCBI_GP:UUE97301.1;Name=UUE97301.1;Ontology_term=GO:0030145,GO:0070006;gbkey=CDS;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967663.1;locus_tag=NDY24_15600;product=aminopeptidase P N-terminal domain-containing protein;protein_id=UUE97301.1;transl_table=11 CP098602.1 Genbank gene 3558244 3558642 . - . ID=gene-NDY24_15605;Name=NDY24_15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15605 CP098602.1 Protein Homology CDS 3558244 3558642 . - 0 ID=cds-UUE97302.1;Parent=gene-NDY24_15605;Dbxref=NCBI_GP:UUE97302.1;Name=UUE97302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508836.1;locus_tag=NDY24_15605;product=hypothetical protein;protein_id=UUE97302.1;transl_table=11 CP098602.1 Genbank gene 3558671 3559996 . - . ID=gene-NDY24_15610;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=NDY24_15610 CP098602.1 Protein Homology CDS 3558671 3559996 . - 0 ID=cds-UUE97303.1;Parent=gene-NDY24_15610;Dbxref=NCBI_GP:UUE97303.1;Name=UUE97303.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005926900.1;locus_tag=NDY24_15610;product=Xaa-Pro dipeptidase;protein_id=UUE97303.1;transl_table=11 CP098602.1 Genbank gene 3560066 3560413 . - . ID=gene-NDY24_15615;Name=NDY24_15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15615 CP098602.1 Protein Homology CDS 3560066 3560413 . - 0 ID=cds-UUE97304.1;Parent=gene-NDY24_15615;Dbxref=NCBI_GP:UUE97304.1;Name=UUE97304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156859.1;locus_tag=NDY24_15615;product=PilZ domain-containing protein;protein_id=UUE97304.1;transl_table=11 CP098602.1 Genbank gene 3560410 3562842 . - . ID=gene-NDY24_15620;Name=NDY24_15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15620 CP098602.1 Protein Homology CDS 3560410 3562842 . - 0 ID=cds-UUE97305.1;Parent=gene-NDY24_15620;Dbxref=NCBI_GP:UUE97305.1;Name=UUE97305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451371.1;locus_tag=NDY24_15620;product=DUF1631 domain-containing protein;protein_id=UUE97305.1;transl_table=11 CP098602.1 Genbank gene 3563022 3564179 . - . ID=gene-NDY24_15625;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=NDY24_15625 CP098602.1 Protein Homology CDS 3563022 3564179 . - 0 ID=cds-UUE97306.1;Parent=gene-NDY24_15625;Dbxref=NCBI_GP:UUE97306.1;Name=UUE97306.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemW;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451370.1;locus_tag=NDY24_15625;product=radical SAM family heme chaperone HemW;protein_id=UUE97306.1;transl_table=11 CP098602.1 Genbank gene 3564196 3564795 . - . ID=gene-NDY24_15630;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=NDY24_15630 CP098602.1 Protein Homology CDS 3564196 3564795 . - 0 ID=cds-UUE97307.1;Parent=gene-NDY24_15630;Dbxref=NCBI_GP:UUE97307.1;Name=UUE97307.1;Ontology_term=GO:0006281,GO:0016462;gbkey=CDS;gene=rdgB;go_function=pyrophosphatase activity|0016462||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162718.1;locus_tag=NDY24_15630;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;protein_id=UUE97307.1;transl_table=11 CP098602.1 Genbank pseudogene 3564792 3565182 . - . ID=gene-NDY24_15635;Name=NDY24_15635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_15635;pseudo=true CP098602.1 Protein Homology CDS 3564792 3565182 . - 0 ID=cds-NDY24_15635;Parent=gene-NDY24_15635;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156863.1;locus_tag=NDY24_15635;product=VOC family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3565179 3565904 . - . ID=gene-NDY24_15640;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=NDY24_15640 CP098602.1 Protein Homology CDS 3565179 3565904 . - 0 ID=cds-UUE97308.1;Parent=gene-NDY24_15640;Dbxref=NCBI_GP:UUE97308.1;Name=UUE97308.1;Ontology_term=GO:0008033,GO:0004549;gbkey=CDS;gene=rph;go_function=tRNA-specific ribonuclease activity|0004549||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005926909.1;locus_tag=NDY24_15640;product=ribonuclease PH;protein_id=UUE97308.1;transl_table=11 CP098602.1 Genbank gene 3566014 3566874 . + . ID=gene-NDY24_15645;Name=NDY24_15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15645 CP098602.1 Protein Homology CDS 3566014 3566874 . + 0 ID=cds-UUE97309.1;Parent=gene-NDY24_15645;Dbxref=NCBI_GP:UUE97309.1;Name=UUE97309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005996763.1;locus_tag=NDY24_15645;product=YicC family protein;protein_id=UUE97309.1;transl_table=11 CP098602.1 Genbank gene 3566987 3567598 . + . ID=gene-NDY24_15650;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=NDY24_15650 CP098602.1 Protein Homology CDS 3566987 3567598 . + 0 ID=cds-UUE97310.1;Parent=gene-NDY24_15650;Dbxref=NCBI_GP:UUE97310.1;Name=UUE97310.1;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377105.1;locus_tag=NDY24_15650;product=guanylate kinase;protein_id=UUE97310.1;transl_table=11 CP098602.1 Genbank gene 3567890 3568189 . + . ID=gene-NDY24_15655;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=NDY24_15655 CP098602.1 Protein Homology CDS 3567890 3568189 . + 0 ID=cds-UUE97311.1;Parent=gene-NDY24_15655;Dbxref=NCBI_GP:UUE97311.1;Name=UUE97311.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoZ;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=transcription%2C DNA-templated|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812428.1;locus_tag=NDY24_15655;product=DNA-directed RNA polymerase subunit omega;protein_id=UUE97311.1;transl_table=11 CP098602.1 Genbank pseudogene 3568317 3570500 . + . ID=gene-NDY24_15660;Name=NDY24_15660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_15660;pseudo=true CP098602.1 Protein Homology CDS 3568317 3570500 . + 0 ID=cds-NDY24_15660;Parent=gene-NDY24_15660;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269543.1;locus_tag=NDY24_15660;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 3570574 3570960 . + . ID=gene-NDY24_15665;Name=NDY24_15665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_15665;pseudo=true CP098602.1 Protein Homology CDS 3570574 3570960 . + 0 ID=cds-NDY24_15665;Parent=gene-NDY24_15665;Note=frameshifted;Ontology_term=GO:0008152,GO:0019239;gbkey=CDS;go_function=deaminase activity|0019239||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486159.1;locus_tag=NDY24_15665;product=Rid family detoxifying hydrolase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 3570987 3573171 . + . ID=gene-NDY24_15670;Name=recG;gbkey=Gene;gene=recG;gene_biotype=pseudogene;locus_tag=NDY24_15670;pseudo=true CP098602.1 Protein Homology CDS 3570987 3573171 . + 0 ID=cds-NDY24_15670;Parent=gene-NDY24_15670;Note=frameshifted;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237293.1;locus_tag=NDY24_15670;product=ATP-dependent DNA helicase RecG;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3573272 3574237 . + . ID=gene-NDY24_15675;Name=NDY24_15675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15675 CP098602.1 Protein Homology CDS 3573272 3574237 . + 0 ID=cds-UUE97312.1;Parent=gene-NDY24_15675;Dbxref=NCBI_GP:UUE97312.1;Name=UUE97312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904706.1;locus_tag=NDY24_15675;product=nucleoside hydrolase;protein_id=UUE97312.1;transl_table=11 CP098602.1 Genbank gene 3574283 3574525 . + . ID=gene-NDY24_15680;Name=NDY24_15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15680 CP098602.1 Protein Homology CDS 3574283 3574525 . + 0 ID=cds-UUE97313.1;Parent=gene-NDY24_15680;Dbxref=NCBI_GP:UUE97313.1;Name=UUE97313.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156869.1;locus_tag=NDY24_15680;product=type B 50S ribosomal protein L31;protein_id=UUE97313.1;transl_table=11 CP098602.1 Genbank gene 3574757 3576046 . + . ID=gene-NDY24_15685;Name=NDY24_15685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15685 CP098602.1 Protein Homology CDS 3574757 3576046 . + 0 ID=cds-UUE97314.1;Parent=gene-NDY24_15685;Dbxref=NCBI_GP:UUE97314.1;Name=UUE97314.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156870.1;locus_tag=NDY24_15685;product=citrate synthase;protein_id=UUE97314.1;transl_table=11 CP098602.1 Genbank gene 3576150 3576800 . - . ID=gene-NDY24_15690;Name=NDY24_15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15690 CP098602.1 Protein Homology CDS 3576150 3576800 . - 0 ID=cds-UUE97315.1;Parent=gene-NDY24_15690;Dbxref=NCBI_GP:UUE97315.1;Name=UUE97315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437499.1;locus_tag=NDY24_15690;product=hypothetical protein;protein_id=UUE97315.1;transl_table=11 CP098602.1 Genbank pseudogene 3577021 3579449 . - . ID=gene-NDY24_15695;Name=NDY24_15695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_15695;pseudo=true CP098602.1 Protein Homology CDS 3577021 3579449 . - 0 ID=cds-NDY24_15695;Parent=gene-NDY24_15695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812411.1;locus_tag=NDY24_15695;product=penicillin-binding protein 1A;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3579641 3580723 . + . ID=gene-NDY24_15700;Name=NDY24_15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15700 CP098602.1 Protein Homology CDS 3579641 3580723 . + 0 ID=cds-UUE97316.1;Parent=gene-NDY24_15700;Dbxref=NCBI_GP:UUE97316.1;Name=UUE97316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974443.1;locus_tag=NDY24_15700;product=pilus assembly protein PilM;protein_id=UUE97316.1;transl_table=11 CP098602.1 Genbank gene 3580723 3581493 . + . ID=gene-NDY24_15705;Name=NDY24_15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15705 CP098602.1 Protein Homology CDS 3580723 3581493 . + 0 ID=cds-UUE97317.1;Parent=gene-NDY24_15705;Dbxref=NCBI_GP:UUE97317.1;Name=UUE97317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911890.1;locus_tag=NDY24_15705;product=PilN domain-containing protein;protein_id=UUE97317.1;transl_table=11 CP098602.1 Genbank gene 3581490 3582155 . + . ID=gene-NDY24_15710;Name=NDY24_15710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15710 CP098602.1 Protein Homology CDS 3581490 3582155 . + 0 ID=cds-UUE97318.1;Parent=gene-NDY24_15710;Dbxref=NCBI_GP:UUE97318.1;Name=UUE97318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903585.1;locus_tag=NDY24_15710;product=type 4a pilus biogenesis protein PilO;protein_id=UUE97318.1;transl_table=11 CP098602.1 Genbank gene 3582152 3582685 . + . ID=gene-NDY24_15715;Name=NDY24_15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15715 CP098602.1 Protein Homology CDS 3582152 3582685 . + 0 ID=cds-UUE97319.1;Parent=gene-NDY24_15715;Dbxref=NCBI_GP:UUE97319.1;Name=UUE97319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364547.1;locus_tag=NDY24_15715;product=pilus assembly protein PilP;protein_id=UUE97319.1;transl_table=11 CP098602.1 Genbank gene 3582705 3584657 . + . ID=gene-NDY24_15720;Name=NDY24_15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15720 CP098602.1 Protein Homology CDS 3582705 3584657 . + 0 ID=cds-UUF00438.1;Parent=gene-NDY24_15720;Dbxref=NCBI_GP:UUF00438.1;Name=UUF00438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038331.1;locus_tag=NDY24_15720;product=type IV pilus secretin PilQ family protein;protein_id=UUF00438.1;transl_table=11 CP098602.1 Genbank gene 3584927 3585946 . + . ID=gene-NDY24_15725;Name=NDY24_15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15725 CP098602.1 Protein Homology CDS 3584927 3585946 . + 0 ID=cds-UUE97320.1;Parent=gene-NDY24_15725;Dbxref=NCBI_GP:UUE97320.1;Name=UUE97320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166368.1;locus_tag=NDY24_15725;product=MoxR family ATPase;protein_id=UUE97320.1;transl_table=11 CP098602.1 Genbank gene 3585969 3586931 . + . ID=gene-NDY24_15730;Name=NDY24_15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15730 CP098602.1 Protein Homology CDS 3585969 3586931 . + 0 ID=cds-UUE97321.1;Parent=gene-NDY24_15730;Dbxref=NCBI_GP:UUE97321.1;Name=UUE97321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304741.1;locus_tag=NDY24_15730;product=DUF58 domain-containing protein;protein_id=UUE97321.1;transl_table=11 CP098602.1 Genbank gene 3586934 3587395 . + . ID=gene-NDY24_15735;Name=NDY24_15735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15735 CP098602.1 Protein Homology CDS 3586934 3587395 . + 0 ID=cds-UUE97322.1;Parent=gene-NDY24_15735;Dbxref=NCBI_GP:UUE97322.1;Name=UUE97322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486191.1;locus_tag=NDY24_15735;product=DUF4381 domain-containing protein;protein_id=UUE97322.1;transl_table=11 CP098602.1 Genbank gene 3587392 3588399 . + . ID=gene-NDY24_15740;Name=NDY24_15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15740 CP098602.1 Protein Homology CDS 3587392 3588399 . + 0 ID=cds-UUE97323.1;Parent=gene-NDY24_15740;Dbxref=NCBI_GP:UUE97323.1;Name=UUE97323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995820.1;locus_tag=NDY24_15740;product=VWA domain-containing protein;protein_id=UUE97323.1;transl_table=11 CP098602.1 Genbank gene 3588396 3590249 . + . ID=gene-NDY24_15745;Name=NDY24_15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15745 CP098602.1 Protein Homology CDS 3588396 3590249 . + 0 ID=cds-UUE97324.1;Parent=gene-NDY24_15745;Dbxref=NCBI_GP:UUE97324.1;Name=UUE97324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575858.1;locus_tag=NDY24_15745;product=VWA domain-containing protein;protein_id=UUE97324.1;transl_table=11 CP098602.1 Genbank pseudogene 3590246 3592013 . + . ID=gene-NDY24_15750;Name=NDY24_15750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_15750;pseudo=true CP098602.1 Protein Homology CDS 3590246 3592013 . + 0 ID=cds-NDY24_15750;Parent=gene-NDY24_15750;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451346.1;locus_tag=NDY24_15750;product=BatD family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3592787 3594067 . + . ID=gene-NDY24_15755;Name=NDY24_15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15755 CP098602.1 Protein Homology CDS 3592787 3594067 . + 0 ID=cds-UUE97325.1;Parent=gene-NDY24_15755;Dbxref=NCBI_GP:UUE97325.1;Name=UUE97325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472649.1;locus_tag=NDY24_15755;product=dicarboxylate/amino acid:cation symporter;protein_id=UUE97325.1;transl_table=11 CP098602.1 Genbank gene 3594325 3596325 . + . ID=gene-NDY24_15760;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=NDY24_15760 CP098602.1 Protein Homology CDS 3594325 3596325 . + 0 ID=cds-UUE97326.1;Parent=gene-NDY24_15760;Dbxref=NCBI_GP:UUE97326.1;Name=UUE97326.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348449.1;locus_tag=NDY24_15760;product=transketolase;protein_id=UUE97326.1;transl_table=11 CP098602.1 Genbank gene 3596433 3596624 . - . ID=gene-NDY24_15765;Name=NDY24_15765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15765 CP098602.1 GeneMarkS-2+ CDS 3596433 3596624 . - 0 ID=cds-UUE97327.1;Parent=gene-NDY24_15765;Dbxref=NCBI_GP:UUE97327.1;Name=UUE97327.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_15765;product=hypothetical protein;protein_id=UUE97327.1;transl_table=11 CP098602.1 Genbank gene 3596808 3599000 . + . ID=gene-NDY24_15770;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=NDY24_15770 CP098602.1 Protein Homology CDS 3596808 3599000 . + 0 ID=cds-UUE97328.1;Parent=gene-NDY24_15770;Dbxref=NCBI_GP:UUE97328.1;Name=UUE97328.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156888.1;locus_tag=NDY24_15770;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=UUE97328.1;transl_table=11 CP098602.1 Genbank gene 3599292 3600263 . - . ID=gene-NDY24_15775;Name=NDY24_15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15775 CP098602.1 Protein Homology CDS 3599292 3600263 . - 0 ID=cds-UUF00439.1;Parent=gene-NDY24_15775;Dbxref=NCBI_GP:UUF00439.1;Name=UUF00439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377065.1;locus_tag=NDY24_15775;product=LysR family transcriptional regulator;protein_id=UUF00439.1;transl_table=11 CP098602.1 Genbank gene 3600423 3601184 . + . ID=gene-NDY24_15780;Name=NDY24_15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15780 CP098602.1 Protein Homology CDS 3600423 3601184 . + 0 ID=cds-UUE97329.1;Parent=gene-NDY24_15780;Dbxref=NCBI_GP:UUE97329.1;Name=UUE97329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237321.1;locus_tag=NDY24_15780;product=SDR family oxidoreductase;protein_id=UUE97329.1;transl_table=11 CP098602.1 Genbank gene 3601241 3601957 . - . ID=gene-NDY24_15785;Name=NDY24_15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15785 CP098602.1 Protein Homology CDS 3601241 3601957 . - 0 ID=cds-UUE97330.1;Parent=gene-NDY24_15785;Dbxref=NCBI_GP:UUE97330.1;Name=UUE97330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156889.1;locus_tag=NDY24_15785;product=M23 family metallopeptidase;protein_id=UUE97330.1;transl_table=11 CP098602.1 Genbank gene 3601960 3602883 . - . ID=gene-NDY24_15790;Name=NDY24_15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15790 CP098602.1 Protein Homology CDS 3601960 3602883 . - 0 ID=cds-UUF00440.1;Parent=gene-NDY24_15790;Dbxref=NCBI_GP:UUF00440.1;Name=UUF00440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156890.1;locus_tag=NDY24_15790;product=L%2CD-transpeptidase;protein_id=UUF00440.1;transl_table=11 CP098602.1 Genbank gene 3603254 3605968 . - . ID=gene-NDY24_15795;Name=NDY24_15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15795 CP098602.1 Protein Homology CDS 3603254 3605968 . - 0 ID=cds-UUE97331.1;Parent=gene-NDY24_15795;Dbxref=NCBI_GP:UUE97331.1;Name=UUE97331.1;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377055.1;locus_tag=NDY24_15795;product=TonB-dependent receptor;protein_id=UUE97331.1;transl_table=11 CP098602.1 Genbank pseudogene 3606106 3607282 . - . ID=gene-NDY24_15800;Name=NDY24_15800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_15800;pseudo=true CP098602.1 Protein Homology CDS 3606106 3607282 . - 0 ID=cds-NDY24_15800;Parent=gene-NDY24_15800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437513.1;locus_tag=NDY24_15800;product=phosphatidylinositol-specific phospholipase C1-like protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 3607450 3609381 . - . ID=gene-NDY24_15805;Name=NDY24_15805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_15805;pseudo=true CP098602.1 Protein Homology CDS 3607450 3609381 . - 0 ID=cds-NDY24_15805;Parent=gene-NDY24_15805;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364587.1;locus_tag=NDY24_15805;product=acetyl-CoA hydrolase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3609536 3609901 . + . ID=gene-NDY24_15810;Name=NDY24_15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15810 CP098602.1 Protein Homology CDS 3609536 3609901 . + 0 ID=cds-UUE97332.1;Parent=gene-NDY24_15810;Dbxref=NCBI_GP:UUE97332.1;Name=UUE97332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156901.1;locus_tag=NDY24_15810;product=BlaI/MecI/CopY family transcriptional regulator;protein_id=UUE97332.1;transl_table=11 CP098602.1 Genbank gene 3609891 3611234 . + . ID=gene-NDY24_15815;Name=NDY24_15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15815 CP098602.1 Protein Homology CDS 3609891 3611234 . + 0 ID=cds-UUE97333.1;Parent=gene-NDY24_15815;Dbxref=NCBI_GP:UUE97333.1;Name=UUE97333.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917494.1;locus_tag=NDY24_15815;product=TonB family protein;protein_id=UUE97333.1;transl_table=11 CP098602.1 Genbank gene 3611231 3611815 . + . ID=gene-NDY24_15820;Name=NDY24_15820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15820 CP098602.1 Protein Homology CDS 3611231 3611815 . + 0 ID=cds-UUE97334.1;Parent=gene-NDY24_15820;Dbxref=NCBI_GP:UUE97334.1;Name=UUE97334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452862.1;locus_tag=NDY24_15820;product=hypothetical protein;protein_id=UUE97334.1;transl_table=11 CP098602.1 Genbank gene 3611869 3612483 . - . ID=gene-NDY24_15825;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=NDY24_15825 CP098602.1 Protein Homology CDS 3611869 3612483 . - 0 ID=cds-UUE97335.1;Parent=gene-NDY24_15825;Dbxref=NCBI_GP:UUE97335.1;Name=UUE97335.1;Ontology_term=GO:0015689,GO:0005524,GO:0015412,GO:0009898,GO:0055052;gbkey=CDS;gene=modC;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type molybdate transporter activity|0015412||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038308.1;locus_tag=NDY24_15825;product=molybdenum ABC transporter ATP-binding protein;protein_id=UUE97335.1;transl_table=11 CP098602.1 Genbank gene 3612483 3613169 . - . ID=gene-NDY24_15830;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=NDY24_15830 CP098602.1 Protein Homology CDS 3612483 3613169 . - 0 ID=cds-UUE97336.1;Parent=gene-NDY24_15830;Dbxref=NCBI_GP:UUE97336.1;Name=UUE97336.1;Ontology_term=GO:0015689,GO:0015098,GO:0016021;gbkey=CDS;gene=modB;go_component=integral component of membrane|0016021||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116572.1;locus_tag=NDY24_15830;product=molybdate ABC transporter permease subunit;protein_id=UUE97336.1;transl_table=11 CP098602.1 Genbank gene 3613185 3613961 . - . ID=gene-NDY24_15835;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=NDY24_15835 CP098602.1 Protein Homology CDS 3613185 3613961 . - 0 ID=cds-UUE97337.1;Parent=gene-NDY24_15835;Dbxref=NCBI_GP:UUE97337.1;Name=UUE97337.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005933035.1;locus_tag=NDY24_15835;product=molybdate ABC transporter substrate-binding protein;protein_id=UUE97337.1;transl_table=11 CP098602.1 Genbank gene 3614038 3614862 . - . ID=gene-NDY24_15840;Name=NDY24_15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15840 CP098602.1 Protein Homology CDS 3614038 3614862 . - 0 ID=cds-UUE97338.1;Parent=gene-NDY24_15840;Dbxref=NCBI_GP:UUE97338.1;Name=UUE97338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452858.1;locus_tag=NDY24_15840;product=MBL fold metallo-hydrolase;protein_id=UUE97338.1;transl_table=11 CP098602.1 Genbank gene 3614876 3615736 . - . ID=gene-NDY24_15845;Name=NDY24_15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15845 CP098602.1 Protein Homology CDS 3614876 3615736 . - 0 ID=cds-UUE97339.1;Parent=gene-NDY24_15845;Dbxref=NCBI_GP:UUE97339.1;Name=UUE97339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090938.1;locus_tag=NDY24_15845;product=S1/P1 nuclease;protein_id=UUE97339.1;transl_table=11 CP098602.1 Genbank gene 3615777 3616391 . - . ID=gene-NDY24_15850;Name=NDY24_15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15850 CP098602.1 Protein Homology CDS 3615777 3616391 . - 0 ID=cds-UUE97340.1;Parent=gene-NDY24_15850;Dbxref=NCBI_GP:UUE97340.1;Name=UUE97340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156909.1;locus_tag=NDY24_15850;product=outer membrane beta-barrel protein;protein_id=UUE97340.1;transl_table=11 CP098602.1 Genbank gene 3616508 3617131 . - . ID=gene-NDY24_15855;Name=NDY24_15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15855 CP098602.1 Protein Homology CDS 3616508 3617131 . - 0 ID=cds-UUE97341.1;Parent=gene-NDY24_15855;Dbxref=NCBI_GP:UUE97341.1;Name=UUE97341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972397.1;locus_tag=NDY24_15855;product=outer membrane beta-barrel protein;protein_id=UUE97341.1;transl_table=11 CP098602.1 Genbank gene 3617419 3617931 . - . ID=gene-NDY24_15860;Name=NDY24_15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15860 CP098602.1 Protein Homology CDS 3617419 3617931 . - 0 ID=cds-UUE97342.1;Parent=gene-NDY24_15860;Dbxref=NCBI_GP:UUE97342.1;Name=UUE97342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156911.1;locus_tag=NDY24_15860;product=SgcJ/EcaC family oxidoreductase;protein_id=UUE97342.1;transl_table=11 CP098602.1 Genbank gene 3618513 3619514 . + . ID=gene-NDY24_15865;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=NDY24_15865 CP098602.1 Protein Homology CDS 3618513 3619514 . + 0 ID=cds-UUE97343.1;Parent=gene-NDY24_15865;Dbxref=NCBI_GP:UUE97343.1;Name=UUE97343.1;Ontology_term=GO:0006094,GO:0006096,GO:0019682;gbkey=CDS;gene=gap;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA,glyceraldehyde-3-phosphate metabolic process|0019682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300876.1;locus_tag=NDY24_15865;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=UUE97343.1;transl_table=11 CP098602.1 Genbank gene 3619732 3620202 . + . ID=gene-NDY24_15870;Name=NDY24_15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15870 CP098602.1 Protein Homology CDS 3619732 3620202 . + 0 ID=cds-UUE97344.1;Parent=gene-NDY24_15870;Dbxref=NCBI_GP:UUE97344.1;Name=UUE97344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965561.1;locus_tag=NDY24_15870;product=hypothetical protein;protein_id=UUE97344.1;transl_table=11 CP098602.1 Genbank gene 3620386 3623163 . + . ID=gene-NDY24_15875;Name=NDY24_15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15875 CP098602.1 Protein Homology CDS 3620386 3623163 . + 0 ID=cds-UUE97345.1;Parent=gene-NDY24_15875;Dbxref=NCBI_GP:UUE97345.1;Name=UUE97345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159178.1;locus_tag=NDY24_15875;product=DUF2339 domain-containing protein;protein_id=UUE97345.1;transl_table=11 CP098602.1 Genbank pseudogene 3623160 3624517 . + . ID=gene-NDY24_15880;Name=NDY24_15880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_15880;pseudo=true CP098602.1 Protein Homology CDS 3623160 3624517 . + 0 ID=cds-NDY24_15880;Parent=gene-NDY24_15880;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269545.1;locus_tag=NDY24_15880;product=DUF3999 domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3624838 3626013 . + . ID=gene-NDY24_15885;Name=NDY24_15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15885 CP098602.1 Protein Homology CDS 3624838 3626013 . + 0 ID=cds-UUE97346.1;Parent=gene-NDY24_15885;Dbxref=NCBI_GP:UUE97346.1;Name=UUE97346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445624.1;locus_tag=NDY24_15885;product=phosphoglycerate kinase;protein_id=UUE97346.1;transl_table=11 CP098602.1 Genbank gene 3626010 3626663 . + . ID=gene-NDY24_15890;Name=NDY24_15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15890 CP098602.1 Protein Homology CDS 3626010 3626663 . + 0 ID=cds-UUE97347.1;Parent=gene-NDY24_15890;Dbxref=NCBI_GP:UUE97347.1;Name=UUE97347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038294.1;locus_tag=NDY24_15890;product=HAD family hydrolase;protein_id=UUE97347.1;transl_table=11 CP098602.1 Genbank pseudogene 3626872 3628339 . + . ID=gene-NDY24_15895;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=pseudogene;locus_tag=NDY24_15895;pseudo=true CP098602.1 Protein Homology CDS 3626872 3628339 . + 0 ID=cds-NDY24_15895;Parent=gene-NDY24_15895;Note=frameshifted;Ontology_term=GO:0006096,GO:0004743,GO:0005737;gbkey=CDS;gene=pyk;go_component=cytoplasm|0005737||IEA;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487265.1;locus_tag=NDY24_15895;product=pyruvate kinase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3628690 3629694 . + . ID=gene-NDY24_15900;Name=NDY24_15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15900 CP098602.1 Protein Homology CDS 3628690 3629694 . + 0 ID=cds-UUE97348.1;Parent=gene-NDY24_15900;Dbxref=NCBI_GP:UUE97348.1;Name=UUE97348.1;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437525.1;locus_tag=NDY24_15900;product=fructose-bisphosphate aldolase class I;protein_id=UUE97348.1;transl_table=11 CP098602.1 Genbank gene 3629941 3630480 . - . ID=gene-NDY24_15905;Name=NDY24_15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15905 CP098602.1 Protein Homology CDS 3629941 3630480 . - 0 ID=cds-UUE97349.1;Parent=gene-NDY24_15905;Dbxref=NCBI_GP:UUE97349.1;Name=UUE97349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300868.1;locus_tag=NDY24_15905;product=O-acetyl-ADP-ribose deacetylase;protein_id=UUE97349.1;transl_table=11 CP098602.1 Genbank gene 3630689 3631195 . - . ID=gene-NDY24_15910;Name=NDY24_15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15910 CP098602.1 Protein Homology CDS 3630689 3631195 . - 0 ID=cds-UUE97350.1;Parent=gene-NDY24_15910;Dbxref=NCBI_GP:UUE97350.1;Name=UUE97350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155478.1;locus_tag=NDY24_15910;product=isoprenylcysteine carboxylmethyltransferase family protein;protein_id=UUE97350.1;transl_table=11 CP098602.1 Genbank gene 3631448 3632407 . - . ID=gene-NDY24_15915;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=NDY24_15915 CP098602.1 Protein Homology CDS 3631448 3632407 . - 0 ID=cds-UUE97351.1;Parent=gene-NDY24_15915;Dbxref=NCBI_GP:UUE97351.1;Name=UUE97351.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660021.1;locus_tag=NDY24_15915;product=cysteine synthase A;protein_id=UUE97351.1;transl_table=11 CP098602.1 Genbank pseudogene 3632424 3633630 . - . ID=gene-NDY24_15920;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=pseudogene;locus_tag=NDY24_15920;pseudo=true CP098602.1 Protein Homology CDS 3632424 3633630 . - 0 ID=cds-NDY24_15920;Parent=gene-NDY24_15920;Note=frameshifted;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922380.1;locus_tag=NDY24_15920;product=uroporphyrinogen-III C-methyltransferase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3633793 3634776 . + . ID=gene-NDY24_15925;Name=NDY24_15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15925 CP098602.1 Protein Homology CDS 3633793 3634776 . + 0 ID=cds-UUE97352.1;Parent=gene-NDY24_15925;Dbxref=NCBI_GP:UUE97352.1;Name=UUE97352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003477207.1;locus_tag=NDY24_15925;product=LysR family transcriptional regulator;protein_id=UUE97352.1;transl_table=11 CP098602.1 Genbank gene 3635632 3635913 . + . ID=gene-NDY24_15930;Name=NDY24_15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15930 CP098602.1 Protein Homology CDS 3635632 3635913 . + 0 ID=cds-UUF00441.1;Parent=gene-NDY24_15930;Dbxref=NCBI_GP:UUF00441.1;Name=UUF00441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850560.1;locus_tag=NDY24_15930;product=hypothetical protein;protein_id=UUF00441.1;transl_table=11 CP098602.1 Genbank gene 3636377 3637570 . - . ID=gene-NDY24_15935;Name=NDY24_15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15935 CP098602.1 Protein Homology CDS 3636377 3637570 . - 0 ID=cds-UUE97353.1;Parent=gene-NDY24_15935;Dbxref=NCBI_GP:UUE97353.1;Name=UUE97353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016944620.1;locus_tag=NDY24_15935;product=HAMP domain-containing histidine kinase;protein_id=UUE97353.1;transl_table=11 CP098602.1 Genbank gene 3637862 3638299 . + . ID=gene-NDY24_15940;Name=NDY24_15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15940 CP098602.1 Protein Homology CDS 3637862 3638299 . + 0 ID=cds-UUE97354.1;Parent=gene-NDY24_15940;Dbxref=NCBI_GP:UUE97354.1;Name=UUE97354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452710.1;locus_tag=NDY24_15940;product=DUF2946 family protein;protein_id=UUE97354.1;transl_table=11 CP098602.1 Genbank gene 3638495 3640495 . + . ID=gene-NDY24_15945;Name=NDY24_15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15945 CP098602.1 Protein Homology CDS 3638495 3640495 . + 0 ID=cds-UUF00442.1;Parent=gene-NDY24_15945;Dbxref=NCBI_GP:UUF00442.1;Name=UUF00442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155471.1;locus_tag=NDY24_15945;product=TonB-dependent receptor;protein_id=UUF00442.1;transl_table=11 CP098602.1 Genbank gene 3640495 3641757 . + . ID=gene-NDY24_15950;Name=NDY24_15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15950 CP098602.1 Protein Homology CDS 3640495 3641757 . + 0 ID=cds-UUE97355.1;Parent=gene-NDY24_15950;Dbxref=NCBI_GP:UUE97355.1;Name=UUE97355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409144.1;locus_tag=NDY24_15950;product=PepSY domain-containing protein;protein_id=UUE97355.1;transl_table=11 CP098602.1 Genbank pseudogene 3641733 3642273 . + . ID=gene-NDY24_15955;Name=NDY24_15955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_15955;pseudo=true CP098602.1 Protein Homology CDS 3641733 3642273 . + 0 ID=cds-NDY24_15955;Parent=gene-NDY24_15955;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158651.1;locus_tag=NDY24_15955;product=PepSY domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3642411 3643136 . - . ID=gene-NDY24_15960;Name=NDY24_15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15960 CP098602.1 Protein Homology CDS 3642411 3643136 . - 0 ID=cds-UUE97356.1;Parent=gene-NDY24_15960;Dbxref=NCBI_GP:UUE97356.1;Name=UUE97356.1;Ontology_term=GO:0019379,GO:0003824,GO:0004604;gbkey=CDS;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038282.1;locus_tag=NDY24_15960;product=phosphoadenylyl-sulfate reductase;protein_id=UUE97356.1;transl_table=11 CP098602.1 Genbank gene 3643133 3644839 . - . ID=gene-NDY24_15965;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=NDY24_15965 CP098602.1 Protein Homology CDS 3643133 3644839 . - 0 ID=cds-UUE97357.1;Parent=gene-NDY24_15965;Dbxref=NCBI_GP:UUE97357.1;Name=UUE97357.1;Ontology_term=GO:0000103,GO:0004783;gbkey=CDS;gene=cysI;go_function=sulfite reductase (NADPH) activity|0004783||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802589.1;locus_tag=NDY24_15965;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=UUE97357.1;transl_table=11 CP098602.1 Genbank gene 3644948 3646795 . - . ID=gene-NDY24_15970;Name=NDY24_15970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15970 CP098602.1 Protein Homology CDS 3644948 3646795 . - 0 ID=cds-UUE97358.1;Parent=gene-NDY24_15970;Dbxref=NCBI_GP:UUE97358.1;Name=UUE97358.1;Ontology_term=GO:0006790,GO:0004783,GO:0009337;gbkey=CDS;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504375.1;locus_tag=NDY24_15970;product=assimilatory sulfite reductase (NADPH) flavoprotein subunit;protein_id=UUE97358.1;transl_table=11 CP098602.1 Genbank gene 3646974 3647882 . + . ID=gene-NDY24_15975;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=NDY24_15975 CP098602.1 Protein Homology CDS 3646974 3647882 . + 0 ID=cds-UUE97359.1;Parent=gene-NDY24_15975;Dbxref=NCBI_GP:UUE97359.1;Name=UUE97359.1;Ontology_term=GO:0019419,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate reduction|0019419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370926.1;locus_tag=NDY24_15975;product=sulfate adenylyltransferase subunit CysD;protein_id=UUE97359.1;transl_table=11 CP098602.1 Genbank gene 3647942 3649858 . + . ID=gene-NDY24_15980;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=NDY24_15980 CP098602.1 Protein Homology CDS 3647942 3649858 . + 0 ID=cds-UUE97360.1;Parent=gene-NDY24_15980;Dbxref=NCBI_GP:UUE97360.1;Name=UUE97360.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930397.1;locus_tag=NDY24_15980;product=sulfate adenylyltransferase subunit CysN;protein_id=UUE97360.1;transl_table=11 CP098602.1 Genbank gene 3649977 3651062 . + . ID=gene-NDY24_15985;Name=NDY24_15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15985 CP098602.1 Protein Homology CDS 3649977 3651062 . + 0 ID=cds-UUE97361.1;Parent=gene-NDY24_15985;Dbxref=NCBI_GP:UUE97361.1;Name=UUE97361.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450709.1;locus_tag=NDY24_15985;product=efflux RND transporter periplasmic adaptor subunit;protein_id=UUE97361.1;transl_table=11 CP098602.1 Genbank gene 3651059 3654184 . + . ID=gene-NDY24_15990;Name=NDY24_15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15990 CP098602.1 Protein Homology CDS 3651059 3654184 . + 0 ID=cds-UUE97362.1;Parent=gene-NDY24_15990;Dbxref=NCBI_GP:UUE97362.1;Name=UUE97362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370936.1;locus_tag=NDY24_15990;product=efflux RND transporter permease subunit;protein_id=UUE97362.1;transl_table=11 CP098602.1 Genbank gene 3654397 3655125 . - . ID=gene-NDY24_15995;Name=NDY24_15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_15995 CP098602.1 GeneMarkS-2+ CDS 3654397 3655125 . - 0 ID=cds-UUE97363.1;Parent=gene-NDY24_15995;Dbxref=NCBI_GP:UUE97363.1;Name=UUE97363.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_15995;product=hypothetical protein;protein_id=UUE97363.1;transl_table=11 CP098602.1 Genbank gene 3655272 3655592 . + . ID=gene-NDY24_16000;Name=NDY24_16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16000 CP098602.1 GeneMarkS-2+ CDS 3655272 3655592 . + 0 ID=cds-UUE97364.1;Parent=gene-NDY24_16000;Dbxref=NCBI_GP:UUE97364.1;Name=UUE97364.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_16000;product=hypothetical protein;protein_id=UUE97364.1;transl_table=11 CP098602.1 Genbank pseudogene 3655714 3656694 . - . ID=gene-NDY24_16005;Name=NDY24_16005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_16005;pseudo=true CP098602.1 Protein Homology CDS 3655714 3656694 . - 0 ID=cds-NDY24_16005;Parent=gene-NDY24_16005;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=NDY24_16005;product=IS5 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 3657184 3658061 . + . ID=gene-NDY24_16010;Name=NDY24_16010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_16010;pseudo=true CP098602.1 Protein Homology CDS 3657184 3658061 . + 0 ID=cds-NDY24_16010;Parent=gene-NDY24_16010;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010375549.1;locus_tag=NDY24_16010;product=TauD/TfdA family dioxygenase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 3658054 3659095 . + . ID=gene-NDY24_16015;Name=NDY24_16015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_16015;pseudo=true CP098602.1 Protein Homology CDS 3658054 3659095 . + 0 ID=cds-NDY24_16015;Parent=gene-NDY24_16015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971047.1;locus_tag=NDY24_16015;product=sulfotransferase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 3659157 3660334 . + . ID=gene-NDY24_16020;Name=NDY24_16020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_16020;pseudo=true CP098602.1 Protein Homology CDS 3659157 3660334 . + 0 ID=cds-NDY24_16020;Parent=gene-NDY24_16020;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172160.1;locus_tag=NDY24_16020;product=aspartate aminotransferase family protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 3660361 3661021 . + . ID=gene-NDY24_16025;Name=NDY24_16025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_16025;pseudo=true CP098602.1 Protein Homology CDS 3660361 3661021 . + 0 ID=cds-NDY24_16025;Parent=gene-NDY24_16025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971045.1;locus_tag=NDY24_16025;product=2OG-Fe(II) oxygenase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 3661029 3661572 . + . ID=gene-NDY24_16030;Name=NDY24_16030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_16030;pseudo=true CP098602.1 Protein Homology CDS 3661029 3661572 . + 0 ID=cds-NDY24_16030;Parent=gene-NDY24_16030;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158593.1;locus_tag=NDY24_16030;product=AAA family ATPase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3661977 3662255 . + . ID=gene-NDY24_16035;Name=NDY24_16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16035 CP098602.1 Protein Homology CDS 3661977 3662255 . + 0 ID=cds-UUE97365.1;Parent=gene-NDY24_16035;Dbxref=NCBI_GP:UUE97365.1;Name=UUE97365.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013676.2;locus_tag=NDY24_16035;product=transposase;protein_id=UUE97365.1;transl_table=11 CP098602.1 Genbank gene 3662848 3664110 . + . ID=gene-NDY24_16040;Name=NDY24_16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16040 CP098602.1 GeneMarkS-2+ CDS 3662848 3664110 . + 0 ID=cds-UUE97366.1;Parent=gene-NDY24_16040;Dbxref=NCBI_GP:UUE97366.1;Name=UUE97366.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_16040;product=hypothetical protein;protein_id=UUE97366.1;transl_table=11 CP098602.1 Genbank gene 3664383 3665364 . + . ID=gene-NDY24_16045;Name=NDY24_16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16045 CP098602.1 Protein Homology CDS 3664383 3664430 . + 0 ID=cds-UUE97367.1;Parent=gene-NDY24_16045;Dbxref=NCBI_GP:UUE97367.1;Name=UUE97367.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=NDY24_16045;product=IS5 family transposase;protein_id=UUE97367.1;transl_table=11 CP098602.1 Protein Homology CDS 3664432 3665364 . + 0 ID=cds-UUE97367.1;Parent=gene-NDY24_16045;Dbxref=NCBI_GP:UUE97367.1;Name=UUE97367.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=NDY24_16045;product=IS5 family transposase;protein_id=UUE97367.1;transl_table=11 CP098602.1 Genbank gene 3666167 3666337 . - . ID=gene-NDY24_16050;Name=NDY24_16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16050 CP098602.1 GeneMarkS-2+ CDS 3666167 3666337 . - 0 ID=cds-UUE97368.1;Parent=gene-NDY24_16050;Dbxref=NCBI_GP:UUE97368.1;Name=UUE97368.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_16050;product=hypothetical protein;protein_id=UUE97368.1;transl_table=11 CP098602.1 Genbank pseudogene 3666764 3666868 . + . ID=gene-NDY24_16055;Name=NDY24_16055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_16055;pseudo=true CP098602.1 Protein Homology CDS 3666764 3666868 . + 0 ID=cds-NDY24_16055;Parent=gene-NDY24_16055;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037667.2;locus_tag=NDY24_16055;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 3666987 3668005 . + . ID=gene-NDY24_16060;Name=NDY24_16060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_16060;pseudo=true CP098602.1 Protein Homology CDS 3666987 3668005 . + 0 ID=cds-NDY24_16060;Parent=gene-NDY24_16060;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037667.2;locus_tag=NDY24_16060;product=M1 family metallopeptidase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3668279 3669337 . + . ID=gene-NDY24_16065;Name=NDY24_16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16065 CP098602.1 Protein Homology CDS 3668279 3669337 . + 0 ID=cds-UUF00443.1;Parent=gene-NDY24_16065;Dbxref=NCBI_GP:UUF00443.1;Name=UUF00443.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023266.2;locus_tag=NDY24_16065;product=ERAP1-like C-terminal domain-containing protein;protein_id=UUF00443.1;transl_table=11 CP098602.1 Genbank pseudogene 3669405 3669565 . + . ID=gene-NDY24_16070;Name=NDY24_16070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_16070;pseudo=true CP098602.1 Protein Homology CDS 3669405 3669565 . + 0 ID=cds-NDY24_16070;Parent=gene-NDY24_16070;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377976.1;locus_tag=NDY24_16070;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 3669808 3670730 . + . ID=gene-NDY24_16075;Name=NDY24_16075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_16075;pseudo=true CP098602.1 Protein Homology CDS 3669808 3670730 . + 0 ID=cds-NDY24_16075;Parent=gene-NDY24_16075;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904161.1;locus_tag=NDY24_16075;product=RNA methyltransferase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3670727 3672241 . + . ID=gene-NDY24_16080;Name=NDY24_16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16080 CP098602.1 Protein Homology CDS 3670727 3672241 . + 0 ID=cds-UUF00444.1;Parent=gene-NDY24_16080;Dbxref=NCBI_GP:UUF00444.1;Name=UUF00444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155458.1;locus_tag=NDY24_16080;product=carboxylesterase family protein;protein_id=UUF00444.1;transl_table=11 CP098602.1 Genbank gene 3672306 3673796 . - . ID=gene-NDY24_16085;Name=NDY24_16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16085 CP098602.1 Protein Homology CDS 3672306 3673796 . - 0 ID=cds-UUE97369.1;Parent=gene-NDY24_16085;Dbxref=NCBI_GP:UUE97369.1;Name=UUE97369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348396.1;locus_tag=NDY24_16085;product=neprosin family prolyl endopeptidase;protein_id=UUE97369.1;transl_table=11 CP098602.1 Genbank gene 3674101 3676065 . - . ID=gene-NDY24_16090;Name=NDY24_16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16090 CP098602.1 Protein Homology CDS 3674101 3676065 . - 0 ID=cds-UUE97370.1;Parent=gene-NDY24_16090;Dbxref=NCBI_GP:UUE97370.1;Name=UUE97370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155457.1;locus_tag=NDY24_16090;product=glycoside hydrolase family 97 protein;protein_id=UUE97370.1;transl_table=11 CP098602.1 Genbank pseudogene 3676285 3679753 . + . ID=gene-NDY24_16095;Name=NDY24_16095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_16095;pseudo=true CP098602.1 Protein Homology CDS 3676285 3679753 . + 0 ID=cds-NDY24_16095;Parent=gene-NDY24_16095;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159185.1;locus_tag=NDY24_16095;product=glycoside hydrolase family 2;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3679894 3682830 . + . ID=gene-NDY24_16100;Name=NDY24_16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16100 CP098602.1 Protein Homology CDS 3679894 3682830 . + 0 ID=cds-UUE97371.1;Parent=gene-NDY24_16100;Dbxref=NCBI_GP:UUE97371.1;Name=UUE97371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038268.1;locus_tag=NDY24_16100;product=TonB-dependent receptor;protein_id=UUE97371.1;transl_table=11 CP098602.1 Genbank gene 3683069 3684121 . - . ID=gene-NDY24_16105;Name=NDY24_16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16105 CP098602.1 Protein Homology CDS 3683069 3684121 . - 0 ID=cds-UUE97372.1;Parent=gene-NDY24_16105;Dbxref=NCBI_GP:UUE97372.1;Name=UUE97372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903335.1;locus_tag=NDY24_16105;product=LacI family DNA-binding transcriptional regulator;protein_id=UUE97372.1;transl_table=11 CP098602.1 Genbank gene 3684317 3685735 . - . ID=gene-NDY24_16110;Name=NDY24_16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16110 CP098602.1 Protein Homology CDS 3684317 3685735 . - 0 ID=cds-UUE97373.1;Parent=gene-NDY24_16110;Dbxref=NCBI_GP:UUE97373.1;Name=UUE97373.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162741.1;locus_tag=NDY24_16110;product=M20/M25/M40 family metallo-hydrolase;protein_id=UUE97373.1;transl_table=11 CP098602.1 Genbank gene 3685846 3686277 . - . ID=gene-NDY24_16115;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=NDY24_16115 CP098602.1 Protein Homology CDS 3685846 3686277 . - 0 ID=cds-UUE97374.1;Parent=gene-NDY24_16115;Dbxref=NCBI_GP:UUE97374.1;Name=UUE97374.1;Ontology_term=GO:0034220,GO:0008381;gbkey=CDS;gene=mscL;go_function=mechanosensitive ion channel activity|0008381||IEA;go_process=ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437543.1;locus_tag=NDY24_16115;product=large-conductance mechanosensitive channel protein MscL;protein_id=UUE97374.1;transl_table=11 CP098602.1 Genbank gene 3686338 3687051 . - . ID=gene-NDY24_16120;Name=NDY24_16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16120 CP098602.1 Protein Homology CDS 3686338 3687051 . - 0 ID=cds-UUE97375.1;Parent=gene-NDY24_16120;Dbxref=NCBI_GP:UUE97375.1;Name=UUE97375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052181.1;locus_tag=NDY24_16120;product=fumarylacetoacetate hydrolase family protein;protein_id=UUE97375.1;transl_table=11 CP098602.1 Genbank gene 3687140 3687415 . - . ID=gene-NDY24_16125;Name=NDY24_16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16125 CP098602.1 Protein Homology CDS 3687140 3687415 . - 0 ID=cds-UUE97376.1;Parent=gene-NDY24_16125;Dbxref=NCBI_GP:UUE97376.1;Name=UUE97376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259856.1;locus_tag=NDY24_16125;product=hypothetical protein;protein_id=UUE97376.1;transl_table=11 CP098602.1 Genbank gene 3687678 3688019 . + . ID=gene-NDY24_16130;Name=NDY24_16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16130 CP098602.1 Protein Homology CDS 3687678 3688019 . + 0 ID=cds-UUE97377.1;Parent=gene-NDY24_16130;Dbxref=NCBI_GP:UUE97377.1;Name=UUE97377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851334.1;locus_tag=NDY24_16130;product=Rieske (2Fe-2S) protein;protein_id=UUE97377.1;transl_table=11 CP098602.1 Genbank gene 3688152 3690014 . - . ID=gene-NDY24_16135;Name=NDY24_16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16135 CP098602.1 Protein Homology CDS 3688152 3690014 . - 0 ID=cds-UUE97378.1;Parent=gene-NDY24_16135;Dbxref=NCBI_GP:UUE97378.1;Name=UUE97378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237329.1;locus_tag=NDY24_16135;product=SLC13 family permease;protein_id=UUE97378.1;transl_table=11 CP098602.1 Genbank gene 3690083 3690868 . - . ID=gene-NDY24_16140;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=NDY24_16140 CP098602.1 Protein Homology CDS 3690083 3690868 . - 0 ID=cds-UUE97379.1;Parent=gene-NDY24_16140;Dbxref=NCBI_GP:UUE97379.1;Name=UUE97379.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine-N7-)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508746.1;locus_tag=NDY24_16140;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=UUE97379.1;transl_table=11 CP098602.1 Genbank gene 3691119 3691913 . - . ID=gene-NDY24_16145;Name=NDY24_16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16145 CP098602.1 Protein Homology CDS 3691119 3691913 . - 0 ID=cds-UUE97380.1;Parent=gene-NDY24_16145;Dbxref=NCBI_GP:UUE97380.1;Name=UUE97380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487184.1;locus_tag=NDY24_16145;product=thiazole synthase;protein_id=UUE97380.1;transl_table=11 CP098602.1 Genbank gene 3691963 3692163 . - . ID=gene-NDY24_16150;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=NDY24_16150 CP098602.1 Protein Homology CDS 3691963 3692163 . - 0 ID=cds-UUE97381.1;Parent=gene-NDY24_16150;Dbxref=NCBI_GP:UUE97381.1;Name=UUE97381.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903326.1;locus_tag=NDY24_16150;product=sulfur carrier protein ThiS;protein_id=UUE97381.1;transl_table=11 CP098602.1 Genbank gene 3692354 3694138 . + . ID=gene-NDY24_16155;Name=NDY24_16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16155 CP098602.1 Protein Homology CDS 3692354 3694138 . + 0 ID=cds-UUF00445.1;Parent=gene-NDY24_16155;Dbxref=NCBI_GP:UUF00445.1;Name=UUF00445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914545.1;locus_tag=NDY24_16155;product=autotransporter domain-containing protein;protein_id=UUF00445.1;transl_table=11 CP098602.1 Genbank gene 3694260 3694333 . + . ID=gene-NDY24_16160;Name=NDY24_16160;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_16160 CP098602.1 tRNAscan-SE tRNA 3694260 3694333 . + . ID=rna-NDY24_16160;Parent=gene-NDY24_16160;anticodon=(pos:3694292..3694294);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_16160;product=tRNA-Gly CP098602.1 tRNAscan-SE exon 3694260 3694333 . + . ID=exon-NDY24_16160-1;Parent=rna-NDY24_16160;anticodon=(pos:3694292..3694294);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_16160;product=tRNA-Gly CP098602.1 Genbank pseudogene 3694382 3695921 . + . ID=gene-NDY24_16165;Name=NDY24_16165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_16165;pseudo=true CP098602.1 Protein Homology CDS 3694382 3695921 . + 0 ID=cds-NDY24_16165;Parent=gene-NDY24_16165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159187.1;locus_tag=NDY24_16165;product=site-specific integrase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3695978 3696379 . - . ID=gene-NDY24_16170;Name=NDY24_16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16170 CP098602.1 GeneMarkS-2+ CDS 3695978 3696379 . - 0 ID=cds-UUE97382.1;Parent=gene-NDY24_16170;Dbxref=NCBI_GP:UUE97382.1;Name=UUE97382.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_16170;product=hypothetical protein;protein_id=UUE97382.1;transl_table=11 CP098602.1 Genbank gene 3697388 3697654 . - . ID=gene-NDY24_16175;Name=NDY24_16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16175 CP098602.1 GeneMarkS-2+ CDS 3697388 3697654 . - 0 ID=cds-UUE97383.1;Parent=gene-NDY24_16175;Dbxref=NCBI_GP:UUE97383.1;Name=UUE97383.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_16175;product=hypothetical protein;protein_id=UUE97383.1;transl_table=11 CP098602.1 Genbank gene 3698023 3698712 . - . ID=gene-NDY24_16180;Name=NDY24_16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16180 CP098602.1 Protein Homology CDS 3698023 3698712 . - 0 ID=cds-UUE97384.1;Parent=gene-NDY24_16180;Dbxref=NCBI_GP:UUE97384.1;Name=UUE97384.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: protein motif:HMM:NF012912.2;locus_tag=NDY24_16180;product=adenylosuccinate synthetase;protein_id=UUE97384.1;transl_table=11 CP098602.1 Genbank pseudogene 3698801 3699532 . - . ID=gene-NDY24_16185;Name=NDY24_16185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_16185;pseudo=true CP098602.1 Protein Homology CDS 3698801 3699532 . - 0 ID=cds-NDY24_16185;Parent=gene-NDY24_16185;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: protein motif:HMM:NF012912.2;locus_tag=NDY24_16185;product=adenylosuccinate synthetase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3699713 3700249 . - . ID=gene-NDY24_16190;Name=NDY24_16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16190 CP098602.1 GeneMarkS-2+ CDS 3699713 3700249 . - 0 ID=cds-UUE97385.1;Parent=gene-NDY24_16190;Dbxref=NCBI_GP:UUE97385.1;Name=UUE97385.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_16190;product=ATP-binding protein;protein_id=UUE97385.1;transl_table=11 CP098602.1 Genbank gene 3701447 3701842 . + . ID=gene-NDY24_16195;Name=NDY24_16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16195 CP098602.1 Protein Homology CDS 3701447 3701842 . + 0 ID=cds-UUE97386.1;Parent=gene-NDY24_16195;Dbxref=NCBI_GP:UUE97386.1;Name=UUE97386.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089881.1;locus_tag=NDY24_16195;product=H-NS histone family protein;protein_id=UUE97386.1;transl_table=11 CP098602.1 Genbank pseudogene 3701919 3702655 . - . ID=gene-NDY24_16200;Name=NDY24_16200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_16200;pseudo=true CP098602.1 Protein Homology CDS 3701919 3702655 . - 0 ID=cds-NDY24_16200;Parent=gene-NDY24_16200;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449698.1;locus_tag=NDY24_16200;product=DNA/RNA non-specific endonuclease;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3702984 3703220 . + . ID=gene-NDY24_16205;Name=NDY24_16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16205 CP098602.1 Protein Homology CDS 3702984 3703220 . + 0 ID=cds-UUE97387.1;Parent=gene-NDY24_16205;Dbxref=NCBI_GP:UUE97387.1;Name=UUE97387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507432.1;locus_tag=NDY24_16205;product=hypothetical protein;protein_id=UUE97387.1;transl_table=11 CP098602.1 Genbank gene 3703319 3704281 . - . ID=gene-NDY24_16210;Name=NDY24_16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16210 CP098602.1 Protein Homology CDS 3703319 3704281 . - 0 ID=cds-UUE97388.1;Parent=gene-NDY24_16210;Dbxref=NCBI_GP:UUE97388.1;Name=UUE97388.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037261.1;locus_tag=NDY24_16210;product=IS1595 family transposase;protein_id=UUE97388.1;transl_table=11 CP098602.1 Genbank pseudogene 3704372 3705407 . + . ID=gene-NDY24_16215;Name=NDY24_16215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_16215;pseudo=true CP098602.1 Protein Homology CDS 3704372 3705407 . + 0 ID=cds-NDY24_16215;Parent=gene-NDY24_16215;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611839.1;locus_tag=NDY24_16215;product=IS3 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3705368 3706192 . - . ID=gene-NDY24_16220;Name=NDY24_16220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16220 CP098602.1 Protein Homology CDS 3705368 3706192 . - 0 ID=cds-UUE97389.1;Parent=gene-NDY24_16220;Dbxref=NCBI_GP:UUE97389.1;Name=UUE97389.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF003818.1;locus_tag=NDY24_16220;product=DUF692 domain-containing protein;protein_id=UUE97389.1;transl_table=11 CP098602.1 Genbank gene 3706354 3708417 . - . ID=gene-NDY24_16225;Name=NDY24_16225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16225 CP098602.1 Protein Homology CDS 3706354 3708417 . - 0 ID=cds-UUE97390.1;Parent=gene-NDY24_16225;Dbxref=NCBI_GP:UUE97390.1;Name=UUE97390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005923916.1;locus_tag=NDY24_16225;product=ferritin-like protein;protein_id=UUE97390.1;transl_table=11 CP098602.1 Genbank gene 3709039 3709671 . + . ID=gene-NDY24_16230;Name=NDY24_16230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16230 CP098602.1 Protein Homology CDS 3709039 3709671 . + 0 ID=cds-UUE97391.1;Parent=gene-NDY24_16230;Dbxref=NCBI_GP:UUE97391.1;Name=UUE97391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172662.1;locus_tag=NDY24_16230;product=hypothetical protein;protein_id=UUE97391.1;transl_table=11 CP098602.1 Genbank gene 3709779 3710453 . + . ID=gene-NDY24_16235;Name=NDY24_16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16235 CP098602.1 Protein Homology CDS 3709779 3710453 . + 0 ID=cds-UUE97392.1;Parent=gene-NDY24_16235;Dbxref=NCBI_GP:UUE97392.1;Name=UUE97392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914554.1;locus_tag=NDY24_16235;product=hypothetical protein;protein_id=UUE97392.1;transl_table=11 CP098602.1 Genbank gene 3710592 3710825 . + . ID=gene-NDY24_16240;Name=NDY24_16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16240 CP098602.1 Protein Homology CDS 3710592 3710825 . + 0 ID=cds-UUE97393.1;Parent=gene-NDY24_16240;Dbxref=NCBI_GP:UUE97393.1;Name=UUE97393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172608.1;locus_tag=NDY24_16240;product=hypothetical protein;protein_id=UUE97393.1;transl_table=11 CP098602.1 Genbank gene 3710918 3711985 . + . ID=gene-NDY24_16245;Name=NDY24_16245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16245 CP098602.1 Protein Homology CDS 3710918 3711985 . + 0 ID=cds-UUE97394.1;Parent=gene-NDY24_16245;Dbxref=NCBI_GP:UUE97394.1;Name=UUE97394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448333.1;locus_tag=NDY24_16245;product=ankyrin repeat domain-containing protein;protein_id=UUE97394.1;transl_table=11 CP098602.1 Genbank gene 3712202 3712615 . - . ID=gene-NDY24_16250;Name=NDY24_16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16250 CP098602.1 GeneMarkS-2+ CDS 3712202 3712615 . - 0 ID=cds-UUE97395.1;Parent=gene-NDY24_16250;Dbxref=NCBI_GP:UUE97395.1;Name=UUE97395.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_16250;product=hypothetical protein;protein_id=UUE97395.1;transl_table=11 CP098602.1 Genbank gene 3712712 3713158 . - . ID=gene-NDY24_16255;Name=NDY24_16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16255 CP098602.1 GeneMarkS-2+ CDS 3712712 3713158 . - 0 ID=cds-UUE97396.1;Parent=gene-NDY24_16255;Dbxref=NCBI_GP:UUE97396.1;Name=UUE97396.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_16255;product=hypothetical protein;protein_id=UUE97396.1;transl_table=11 CP098602.1 Genbank gene 3713304 3714884 . - . ID=gene-NDY24_16260;Name=NDY24_16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16260 CP098602.1 Protein Homology CDS 3713304 3714884 . - 0 ID=cds-UUE97397.1;Parent=gene-NDY24_16260;Dbxref=NCBI_GP:UUE97397.1;Name=UUE97397.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025638.2;locus_tag=NDY24_16260;product=DUF4365 domain-containing protein;protein_id=UUE97397.1;transl_table=11 CP098602.1 Genbank gene 3715441 3715818 . - . ID=gene-NDY24_16265;Name=NDY24_16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16265 CP098602.1 GeneMarkS-2+ CDS 3715441 3715818 . - 0 ID=cds-UUE97398.1;Parent=gene-NDY24_16265;Dbxref=NCBI_GP:UUE97398.1;Name=UUE97398.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_16265;product=hypothetical protein;protein_id=UUE97398.1;transl_table=11 CP098602.1 Genbank pseudogene 3715833 3718033 . - . ID=gene-NDY24_16270;Name=NDY24_16270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_16270;pseudo=true CP098602.1 Protein Homology CDS 3715833 3718033 . - 0 ID=cds-NDY24_16270;Parent=gene-NDY24_16270;Note=frameshifted;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172610.1;locus_tag=NDY24_16270;product=DEAD/DEAH box helicase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3718126 3718698 . - . ID=gene-NDY24_16275;Name=NDY24_16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16275 CP098602.1 Protein Homology CDS 3718126 3718698 . - 0 ID=cds-UUF00446.1;Parent=gene-NDY24_16275;Dbxref=NCBI_GP:UUF00446.1;Name=UUF00446.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022376.2;locus_tag=NDY24_16275;product=ATP-binding protein;protein_id=UUF00446.1;transl_table=11 CP098602.1 Genbank gene 3718701 3719680 . + . ID=gene-NDY24_16280;Name=NDY24_16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16280 CP098602.1 Protein Homology CDS 3718701 3719412 . + 0 ID=cds-UUE97399.1;Parent=gene-NDY24_16280;Dbxref=NCBI_GP:UUE97399.1;Name=UUE97399.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=NDY24_16280;product=IS5 family transposase;protein_id=UUE97399.1;transl_table=11 CP098602.1 Protein Homology CDS 3719412 3719680 . + 2 ID=cds-UUE97399.1;Parent=gene-NDY24_16280;Dbxref=NCBI_GP:UUE97399.1;Name=UUE97399.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=NDY24_16280;product=IS5 family transposase;protein_id=UUE97399.1;transl_table=11 CP098602.1 Genbank gene 3719768 3720493 . - . ID=gene-NDY24_16285;Name=NDY24_16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16285 CP098602.1 Protein Homology CDS 3719768 3720493 . - 0 ID=cds-UUE97400.1;Parent=gene-NDY24_16285;Dbxref=NCBI_GP:UUE97400.1;Name=UUE97400.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022376.2;locus_tag=NDY24_16285;product=ATP-binding protein;protein_id=UUE97400.1;transl_table=11 CP098602.1 Genbank gene 3720490 3721185 . - . ID=gene-NDY24_16290;Name=NDY24_16290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16290 CP098602.1 Protein Homology CDS 3720490 3721185 . - 0 ID=cds-UUF00447.1;Parent=gene-NDY24_16290;Dbxref=NCBI_GP:UUF00447.1;Name=UUF00447.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026952.2;locus_tag=NDY24_16290;product=hypothetical protein;protein_id=UUF00447.1;transl_table=11 CP098602.1 Genbank gene 3721234 3723171 . - . ID=gene-NDY24_16295;Name=NDY24_16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16295 CP098602.1 Protein Homology CDS 3721234 3723171 . - 0 ID=cds-UUE97401.1;Parent=gene-NDY24_16295;Dbxref=NCBI_GP:UUE97401.1;Name=UUE97401.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024606.2;locus_tag=NDY24_16295;product=TerB N-terminal domain-containing protein;protein_id=UUE97401.1;transl_table=11 CP098602.1 Genbank gene 3723857 3725299 . + . ID=gene-NDY24_16300;Name=NDY24_16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16300 CP098602.1 Protein Homology CDS 3723857 3725299 . + 0 ID=cds-UUE97402.1;Parent=gene-NDY24_16300;Dbxref=NCBI_GP:UUE97402.1;Name=UUE97402.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024867.2;locus_tag=NDY24_16300;product=ATP-binding protein;protein_id=UUE97402.1;transl_table=11 CP098602.1 Genbank gene 3725366 3726154 . + . ID=gene-NDY24_16305;Name=NDY24_16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16305 CP098602.1 GeneMarkS-2+ CDS 3725366 3726154 . + 0 ID=cds-UUE97403.1;Parent=gene-NDY24_16305;Dbxref=NCBI_GP:UUE97403.1;Name=UUE97403.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_16305;product=hypothetical protein;protein_id=UUE97403.1;transl_table=11 CP098602.1 Genbank pseudogene 3726861 3727842 . + . ID=gene-NDY24_16310;Name=NDY24_16310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_16310;pseudo=true CP098602.1 Protein Homology CDS 3726861 3727842 . + 0 ID=cds-NDY24_16310;Parent=gene-NDY24_16310;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=NDY24_16310;product=IS5 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3728647 3728940 . + . ID=gene-NDY24_16315;Name=NDY24_16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16315 CP098602.1 GeneMarkS-2+ CDS 3728647 3728940 . + 0 ID=cds-UUE97404.1;Parent=gene-NDY24_16315;Dbxref=NCBI_GP:UUE97404.1;Name=UUE97404.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_16315;product=hypothetical protein;protein_id=UUE97404.1;transl_table=11 CP098602.1 Genbank gene 3729001 3729663 . - . ID=gene-NDY24_16320;Name=NDY24_16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16320 CP098602.1 GeneMarkS-2+ CDS 3729001 3729663 . - 0 ID=cds-UUE97405.1;Parent=gene-NDY24_16320;Dbxref=NCBI_GP:UUE97405.1;Name=UUE97405.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_16320;product=hypothetical protein;protein_id=UUE97405.1;transl_table=11 CP098602.1 Genbank pseudogene 3729884 3730222 . - . ID=gene-NDY24_16325;Name=NDY24_16325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_16325;pseudo=true CP098602.1 Protein Homology CDS 3729884 3730222 . - 0 ID=cds-NDY24_16325;Parent=gene-NDY24_16325;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172674.1;locus_tag=NDY24_16325;product=integrase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3730222 3731304 . - . ID=gene-NDY24_16330;Name=NDY24_16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16330 CP098602.1 Protein Homology CDS 3730222 3731304 . - 0 ID=cds-UUE97406.1;Parent=gene-NDY24_16330;Dbxref=NCBI_GP:UUE97406.1;Name=UUE97406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924053.1;locus_tag=NDY24_16330;product=serine/threonine protein kinase;protein_id=UUE97406.1;transl_table=11 CP098602.1 Genbank gene 3731301 3732353 . - . ID=gene-NDY24_16335;Name=NDY24_16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16335 CP098602.1 Protein Homology CDS 3731301 3732353 . - 0 ID=cds-UUE97407.1;Parent=gene-NDY24_16335;Dbxref=NCBI_GP:UUE97407.1;Name=UUE97407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448322.1;locus_tag=NDY24_16335;product=serine/threonine protein kinase;protein_id=UUE97407.1;transl_table=11 CP098602.1 Genbank gene 3732381 3733565 . - . ID=gene-NDY24_16340;Name=NDY24_16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16340 CP098602.1 Protein Homology CDS 3732381 3733565 . - 0 ID=cds-UUE97408.1;Parent=gene-NDY24_16340;Dbxref=NCBI_GP:UUE97408.1;Name=UUE97408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448321.1;locus_tag=NDY24_16340;product=protein phosphatase 2C domain-containing protein;protein_id=UUE97408.1;transl_table=11 CP098602.1 Genbank pseudogene 3733712 3734964 . - . ID=gene-NDY24_16345;Name=NDY24_16345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_16345;pseudo=true CP098602.1 Protein Homology CDS 3733712 3734964 . - 0 ID=cds-NDY24_16345;Parent=gene-NDY24_16345;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172829.1;locus_tag=NDY24_16345;product=site-specific integrase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 3735204 3736350 . + . ID=gene-NDY24_16350;Name=NDY24_16350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_16350;pseudo=true CP098602.1 Protein Homology CDS 3735204 3736350 . + 0 ID=cds-NDY24_16350;Parent=gene-NDY24_16350;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=NDY24_16350;product=IS3 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3737118 3738281 . + . ID=gene-NDY24_16355;Name=NDY24_16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16355 CP098602.1 GeneMarkS-2+ CDS 3737118 3738281 . + 0 ID=cds-UUE97409.1;Parent=gene-NDY24_16355;Dbxref=NCBI_GP:UUE97409.1;Name=UUE97409.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_16355;product=hypothetical protein;protein_id=UUE97409.1;transl_table=11 CP098602.1 Genbank gene 3738306 3738944 . + . ID=gene-NDY24_16360;Name=NDY24_16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16360 CP098602.1 GeneMarkS-2+ CDS 3738306 3738944 . + 0 ID=cds-UUE97410.1;Parent=gene-NDY24_16360;Dbxref=NCBI_GP:UUE97410.1;Name=UUE97410.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_16360;product=hypothetical protein;protein_id=UUE97410.1;transl_table=11 CP098602.1 Genbank gene 3738877 3739905 . + . ID=gene-NDY24_16365;Name=NDY24_16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16365 CP098602.1 GeneMarkS-2+ CDS 3738877 3739905 . + 0 ID=cds-UUE97411.1;Parent=gene-NDY24_16365;Dbxref=NCBI_GP:UUE97411.1;Name=UUE97411.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_16365;product=hypothetical protein;protein_id=UUE97411.1;transl_table=11 CP098602.1 Genbank gene 3739988 3740878 . + . ID=gene-NDY24_16370;Name=NDY24_16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16370 CP098602.1 Protein Homology CDS 3739988 3740878 . + 0 ID=cds-UUE97412.1;Parent=gene-NDY24_16370;Dbxref=NCBI_GP:UUE97412.1;Name=UUE97412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449054.1;locus_tag=NDY24_16370;product=MobA/MobL family protein;protein_id=UUE97412.1;transl_table=11 CP098602.1 Genbank gene 3741104 3741496 . - . ID=gene-NDY24_16375;Name=NDY24_16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16375 CP098602.1 Protein Homology CDS 3741104 3741496 . - 0 ID=cds-UUE97413.1;Parent=gene-NDY24_16375;Dbxref=NCBI_GP:UUE97413.1;Name=UUE97413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005996428.1;locus_tag=NDY24_16375;product=hypothetical protein;protein_id=UUE97413.1;transl_table=11 CP098602.1 Genbank pseudogene 3741546 3741856 . - . ID=gene-NDY24_16380;Name=NDY24_16380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_16380;pseudo=true CP098602.1 Protein Homology CDS 3741546 3741856 . - 0 ID=cds-NDY24_16380;Parent=gene-NDY24_16380;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811379.1;locus_tag=NDY24_16380;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3742047 3742400 . + . ID=gene-NDY24_16385;Name=NDY24_16385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16385 CP098602.1 Protein Homology CDS 3742047 3742400 . + 0 ID=cds-UUE97414.1;Parent=gene-NDY24_16385;Dbxref=NCBI_GP:UUE97414.1;Name=UUE97414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005923993.1;locus_tag=NDY24_16385;product=helix-turn-helix domain-containing protein;protein_id=UUE97414.1;transl_table=11 CP098602.1 Genbank pseudogene 3742663 3744365 . + . ID=gene-NDY24_16390;Name=NDY24_16390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_16390;pseudo=true CP098602.1 Protein Homology CDS 3742663 3744365 . + 0 ID=cds-NDY24_16390;Parent=gene-NDY24_16390;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811375.1;locus_tag=NDY24_16390;product=type IV secretory system conjugative DNA transfer family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3744410 3745048 . + . ID=gene-NDY24_16395;Name=NDY24_16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16395 CP098602.1 GeneMarkS-2+ CDS 3744410 3745048 . + 0 ID=cds-UUE97415.1;Parent=gene-NDY24_16395;Dbxref=NCBI_GP:UUE97415.1;Name=UUE97415.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_16395;product=hypothetical protein;protein_id=UUE97415.1;transl_table=11 CP098602.1 Genbank gene 3745045 3745428 . + . ID=gene-NDY24_16400;Name=NDY24_16400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16400 CP098602.1 GeneMarkS-2+ CDS 3745045 3745428 . + 0 ID=cds-UUE97416.1;Parent=gene-NDY24_16400;Dbxref=NCBI_GP:UUE97416.1;Name=UUE97416.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_16400;product=hypothetical protein;protein_id=UUE97416.1;transl_table=11 CP098602.1 Genbank gene 3745436 3746503 . + . ID=gene-NDY24_16405;Name=NDY24_16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16405 CP098602.1 GeneMarkS-2+ CDS 3745436 3746503 . + 0 ID=cds-UUE97417.1;Parent=gene-NDY24_16405;Dbxref=NCBI_GP:UUE97417.1;Name=UUE97417.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_16405;product=hypothetical protein;protein_id=UUE97417.1;transl_table=11 CP098602.1 Genbank gene 3746621 3748546 . + . ID=gene-NDY24_16410;Name=NDY24_16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16410 CP098602.1 Protein Homology CDS 3746621 3748546 . + 0 ID=cds-UUE97418.1;Parent=gene-NDY24_16410;Dbxref=NCBI_GP:UUE97418.1;Name=UUE97418.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013625.2;locus_tag=NDY24_16410;product=peptidoglycan-binding protein;protein_id=UUE97418.1;transl_table=11 CP098602.1 Genbank gene 3748850 3750148 . + . ID=gene-NDY24_16415;Name=NDY24_16415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16415 CP098602.1 Protein Homology CDS 3748850 3750148 . + 0 ID=cds-UUE97419.1;Parent=gene-NDY24_16415;Dbxref=NCBI_GP:UUE97419.1;Name=UUE97419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924029.1;locus_tag=NDY24_16415;product=HlyD family secretion protein;protein_id=UUE97419.1;transl_table=11 CP098602.1 Genbank gene 3750145 3752361 . + . ID=gene-NDY24_16420;Name=NDY24_16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16420 CP098602.1 Protein Homology CDS 3750145 3752361 . + 0 ID=cds-UUE97420.1;Parent=gene-NDY24_16420;Dbxref=NCBI_GP:UUE97420.1;Name=UUE97420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089914.1;locus_tag=NDY24_16420;product=peptidase domain-containing ABC transporter;protein_id=UUE97420.1;transl_table=11 CP098602.1 Genbank gene 3752468 3753280 . + . ID=gene-NDY24_16425;Name=NDY24_16425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16425 CP098602.1 Protein Homology CDS 3752468 3753280 . + 0 ID=cds-UUE97421.1;Parent=gene-NDY24_16425;Dbxref=NCBI_GP:UUE97421.1;Name=UUE97421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924034.1;locus_tag=NDY24_16425;product=hypothetical protein;protein_id=UUE97421.1;transl_table=11 CP098602.1 Genbank gene 3753321 3753845 . + . ID=gene-NDY24_16430;Name=NDY24_16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16430 CP098602.1 Protein Homology CDS 3753321 3753845 . + 0 ID=cds-UUE97422.1;Parent=gene-NDY24_16430;Dbxref=NCBI_GP:UUE97422.1;Name=UUE97422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450246.1;locus_tag=NDY24_16430;product=hypothetical protein;protein_id=UUE97422.1;transl_table=11 CP098602.1 Genbank gene 3753995 3755272 . - . ID=gene-NDY24_16435;Name=NDY24_16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16435 CP098602.1 Protein Homology CDS 3753995 3755272 . - 0 ID=cds-UUE97423.1;Parent=gene-NDY24_16435;Dbxref=NCBI_GP:UUE97423.1;Name=UUE97423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269829.1;locus_tag=NDY24_16435;product=ABC transporter permease;protein_id=UUE97423.1;transl_table=11 CP098602.1 Genbank gene 3755335 3755766 . - . ID=gene-NDY24_16440;Name=NDY24_16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16440 CP098602.1 Protein Homology CDS 3755335 3755766 . - 0 ID=cds-UUE97424.1;Parent=gene-NDY24_16440;Dbxref=NCBI_GP:UUE97424.1;Name=UUE97424.1;Ontology_term=GO:0009404,GO:0016746,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=acyltransferase activity|0016746||IEA;go_process=toxin metabolic process|0009404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172654.1;locus_tag=NDY24_16440;product=toxin-activating lysine-acyltransferase;protein_id=UUE97424.1;transl_table=11 CP098602.1 Genbank gene 3755756 3757570 . - . ID=gene-NDY24_16445;Name=NDY24_16445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16445 CP098602.1 Protein Homology CDS 3755756 3757570 . - 0 ID=cds-UUE97425.1;Parent=gene-NDY24_16445;Dbxref=NCBI_GP:UUE97425.1;Name=UUE97425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490925.1;locus_tag=NDY24_16445;product=protein adenylyltransferase SelO family protein;protein_id=UUE97425.1;transl_table=11 CP098602.1 Genbank gene 3758064 3759707 . + . ID=gene-NDY24_16450;Name=NDY24_16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16450 CP098602.1 Protein Homology CDS 3758064 3759707 . + 0 ID=cds-UUE97426.1;Parent=gene-NDY24_16450;Dbxref=NCBI_GP:UUE97426.1;Name=UUE97426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450242.1;locus_tag=NDY24_16450;product=MobA/MobL family protein;protein_id=UUE97426.1;transl_table=11 CP098602.1 Genbank gene 3760074 3761054 . - . ID=gene-NDY24_16455;Name=NDY24_16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16455 CP098602.1 Protein Homology CDS 3760074 3761054 . - 0 ID=cds-UUE97427.1;Parent=gene-NDY24_16455;Dbxref=NCBI_GP:UUE97427.1;Name=UUE97427.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=NDY24_16455;product=IS5 family transposase;protein_id=UUE97427.1;transl_table=11 CP098602.1 Genbank gene 3761313 3762002 . + . ID=gene-NDY24_16460;Name=NDY24_16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16460 CP098602.1 Protein Homology CDS 3761313 3762002 . + 0 ID=cds-UUE97428.1;Parent=gene-NDY24_16460;Dbxref=NCBI_GP:UUE97428.1;Name=UUE97428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450241.1;locus_tag=NDY24_16460;product=hypothetical protein;protein_id=UUE97428.1;transl_table=11 CP098602.1 Genbank gene 3762175 3762726 . - . ID=gene-NDY24_16465;Name=NDY24_16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16465 CP098602.1 GeneMarkS-2+ CDS 3762175 3762726 . - 0 ID=cds-UUE97429.1;Parent=gene-NDY24_16465;Dbxref=NCBI_GP:UUE97429.1;Name=UUE97429.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_16465;product=hypothetical protein;protein_id=UUE97429.1;transl_table=11 CP098602.1 Genbank gene 3762884 3763333 . - . ID=gene-NDY24_16470;Name=NDY24_16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16470 CP098602.1 Protein Homology CDS 3762884 3763333 . - 0 ID=cds-UUE97430.1;Parent=gene-NDY24_16470;Dbxref=NCBI_GP:UUE97430.1;Name=UUE97430.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039808.1;locus_tag=NDY24_16470;product=DUF6527 family protein;protein_id=UUE97430.1;transl_table=11 CP098602.1 Genbank gene 3763330 3763752 . - . ID=gene-NDY24_16475;Name=NDY24_16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16475 CP098602.1 GeneMarkS-2+ CDS 3763330 3763752 . - 0 ID=cds-UUE97431.1;Parent=gene-NDY24_16475;Dbxref=NCBI_GP:UUE97431.1;Name=UUE97431.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_16475;product=hypothetical protein;protein_id=UUE97431.1;transl_table=11 CP098602.1 Genbank gene 3764491 3765006 . - . ID=gene-NDY24_16480;Name=NDY24_16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16480 CP098602.1 Protein Homology CDS 3764491 3765006 . - 0 ID=cds-UUE97432.1;Parent=gene-NDY24_16480;Dbxref=NCBI_GP:UUE97432.1;Name=UUE97432.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025808.2;locus_tag=NDY24_16480;product=multiubiquitin domain-containing protein;protein_id=UUE97432.1;transl_table=11 CP098602.1 Genbank gene 3765334 3765660 . + . ID=gene-NDY24_16485;Name=NDY24_16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16485 CP098602.1 Protein Homology CDS 3765334 3765660 . + 0 ID=cds-UUE97433.1;Parent=gene-NDY24_16485;Dbxref=NCBI_GP:UUE97433.1;Name=UUE97433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007804352.1;locus_tag=NDY24_16485;product=helix-turn-helix domain-containing protein;protein_id=UUE97433.1;transl_table=11 CP098602.1 Genbank gene 3765673 3766374 . + . ID=gene-NDY24_16490;Name=NDY24_16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16490 CP098602.1 Protein Homology CDS 3765673 3766374 . + 0 ID=cds-UUE97434.1;Parent=gene-NDY24_16490;Dbxref=NCBI_GP:UUE97434.1;Name=UUE97434.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017885.2;locus_tag=NDY24_16490;product=ImmA/IrrE family metallo-endopeptidase;protein_id=UUE97434.1;transl_table=11 CP098602.1 Genbank gene 3766837 3768051 . - . ID=gene-NDY24_16495;Name=NDY24_16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16495 CP098602.1 Protein Homology CDS 3766837 3768051 . - 0 ID=cds-UUE97435.1;Parent=gene-NDY24_16495;Dbxref=NCBI_GP:UUE97435.1;Name=UUE97435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452191.1;locus_tag=NDY24_16495;product=MFS transporter;protein_id=UUE97435.1;transl_table=11 CP098602.1 Genbank gene 3768048 3769241 . - . ID=gene-NDY24_16500;Name=NDY24_16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16500 CP098602.1 Protein Homology CDS 3768048 3769241 . - 0 ID=cds-UUE97436.1;Parent=gene-NDY24_16500;Dbxref=NCBI_GP:UUE97436.1;Name=UUE97436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014645764.1;locus_tag=NDY24_16500;product=beta-lactamase family protein;protein_id=UUE97436.1;transl_table=11 CP098602.1 Genbank gene 3769355 3770275 . + . ID=gene-NDY24_16505;Name=NDY24_16505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16505 CP098602.1 Protein Homology CDS 3769355 3770275 . + 0 ID=cds-UUE97437.1;Parent=gene-NDY24_16505;Dbxref=NCBI_GP:UUE97437.1;Name=UUE97437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452192.1;locus_tag=NDY24_16505;product=LysR family transcriptional regulator;protein_id=UUE97437.1;transl_table=11 CP098602.1 Genbank gene 3770374 3770796 . + . ID=gene-NDY24_16510;Name=NDY24_16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16510 CP098602.1 Protein Homology CDS 3770374 3770796 . + 0 ID=cds-UUE97438.1;Parent=gene-NDY24_16510;Dbxref=NCBI_GP:UUE97438.1;Name=UUE97438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158338.1;locus_tag=NDY24_16510;product=DedA family protein;protein_id=UUE97438.1;transl_table=11 CP098602.1 Genbank gene 3771088 3773334 . - . ID=gene-NDY24_16515;Name=NDY24_16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16515 CP098602.1 Protein Homology CDS 3771088 3773334 . - 0 ID=cds-UUE97439.1;Parent=gene-NDY24_16515;Dbxref=NCBI_GP:UUE97439.1;Name=UUE97439.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448347.1;locus_tag=NDY24_16515;product=methyl-accepting chemotaxis protein;protein_id=UUE97439.1;transl_table=11 CP098602.1 Genbank gene 3773787 3774071 . + . ID=gene-NDY24_16520;Name=NDY24_16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16520 CP098602.1 Protein Homology CDS 3773787 3774071 . + 0 ID=cds-UUE97440.1;Parent=gene-NDY24_16520;Dbxref=NCBI_GP:UUE97440.1;Name=UUE97440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448348.1;locus_tag=NDY24_16520;product=hypothetical protein;protein_id=UUE97440.1;transl_table=11 CP098602.1 Genbank gene 3774068 3774337 . - . ID=gene-NDY24_16525;Name=NDY24_16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16525 CP098602.1 GeneMarkS-2+ CDS 3774068 3774337 . - 0 ID=cds-UUE97441.1;Parent=gene-NDY24_16525;Dbxref=NCBI_GP:UUE97441.1;Name=UUE97441.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_16525;product=hypothetical protein;protein_id=UUE97441.1;transl_table=11 CP098602.1 Genbank gene 3774501 3775688 . - . ID=gene-NDY24_16530;Name=NDY24_16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16530 CP098602.1 GeneMarkS-2+ CDS 3774501 3775688 . - 0 ID=cds-UUE97442.1;Parent=gene-NDY24_16530;Dbxref=NCBI_GP:UUE97442.1;Name=UUE97442.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_16530;product=hypothetical protein;protein_id=UUE97442.1;transl_table=11 CP098602.1 Genbank gene 3775943 3776338 . + . ID=gene-NDY24_16535;Name=NDY24_16535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16535 CP098602.1 Protein Homology CDS 3775943 3776338 . + 0 ID=cds-UUF00448.1;Parent=gene-NDY24_16535;Dbxref=NCBI_GP:UUF00448.1;Name=UUF00448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038225.1;locus_tag=NDY24_16535;product=MobC family plasmid mobilization relaxosome protein;protein_id=UUF00448.1;transl_table=11 CP098602.1 Genbank gene 3776427 3776819 . + . ID=gene-NDY24_16540;Name=NDY24_16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16540 CP098602.1 Protein Homology CDS 3776427 3776819 . + 0 ID=cds-UUE97443.1;Parent=gene-NDY24_16540;Dbxref=NCBI_GP:UUE97443.1;Name=UUE97443.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154750.1;locus_tag=NDY24_16540;product=H-NS histone family protein;protein_id=UUE97443.1;transl_table=11 CP098602.1 Genbank gene 3777176 3779308 . - . ID=gene-NDY24_16545;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=NDY24_16545 CP098602.1 Protein Homology CDS 3777176 3779308 . - 0 ID=cds-UUE97444.1;Parent=gene-NDY24_16545;Dbxref=NCBI_GP:UUE97444.1;Name=UUE97444.1;Ontology_term=GO:0005980,GO:0004133;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172327.1;locus_tag=NDY24_16545;product=glycogen debranching protein GlgX;protein_id=UUE97444.1;transl_table=11 CP098602.1 Genbank gene 3779804 3780724 . + . ID=gene-NDY24_16550;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=NDY24_16550 CP098602.1 Protein Homology CDS 3779804 3780724 . + 0 ID=cds-UUE97445.1;Parent=gene-NDY24_16550;Dbxref=NCBI_GP:UUE97445.1;Name=UUE97445.1;Ontology_term=GO:0006464,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=cellular protein modification process|0006464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504335.1;locus_tag=NDY24_16550;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=UUE97445.1;transl_table=11 CP098602.1 Genbank gene 3781068 3781745 . + . ID=gene-NDY24_16555;Name=NDY24_16555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16555 CP098602.1 Protein Homology CDS 3781068 3781745 . + 0 ID=cds-UUE97446.1;Parent=gene-NDY24_16555;Dbxref=NCBI_GP:UUE97446.1;Name=UUE97446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169438.1;locus_tag=NDY24_16555;product=response regulator transcription factor;protein_id=UUE97446.1;transl_table=11 CP098602.1 Genbank gene 3781738 3783072 . + . ID=gene-NDY24_16560;Name=NDY24_16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16560 CP098602.1 Protein Homology CDS 3781738 3783072 . + 0 ID=cds-UUE97447.1;Parent=gene-NDY24_16560;Dbxref=NCBI_GP:UUE97447.1;Name=UUE97447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237347.1;locus_tag=NDY24_16560;product=HAMP domain-containing histidine kinase;protein_id=UUE97447.1;transl_table=11 CP098602.1 Genbank gene 3783221 3783712 . - . ID=gene-NDY24_16565;Name=NDY24_16565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16565 CP098602.1 Protein Homology CDS 3783221 3783712 . - 0 ID=cds-UUE97448.1;Parent=gene-NDY24_16565;Dbxref=NCBI_GP:UUE97448.1;Name=UUE97448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038220.1;locus_tag=NDY24_16565;product=GNAT family N-acetyltransferase;protein_id=UUE97448.1;transl_table=11 CP098602.1 Genbank gene 3783709 3783999 . - . ID=gene-NDY24_16570;Name=NDY24_16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16570 CP098602.1 Protein Homology CDS 3783709 3783999 . - 0 ID=cds-UUE97449.1;Parent=gene-NDY24_16570;Dbxref=NCBI_GP:UUE97449.1;Name=UUE97449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508712.1;locus_tag=NDY24_16570;product=DUF1778 domain-containing protein;protein_id=UUE97449.1;transl_table=11 CP098602.1 Genbank pseudogene 3784075 3784477 . - . ID=gene-NDY24_16575;Name=NDY24_16575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_16575;pseudo=true CP098602.1 Protein Homology CDS 3784075 3784477 . - 0 ID=cds-NDY24_16575;Parent=gene-NDY24_16575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437599.1;locus_tag=NDY24_16575;product=type I toxin-antitoxin system SymE family toxin;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3785009 3785632 . - . ID=gene-NDY24_16580;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=NDY24_16580 CP098602.1 Protein Homology CDS 3785009 3785632 . - 0 ID=cds-UUE97450.1;Parent=gene-NDY24_16580;Dbxref=NCBI_GP:UUE97450.1;Name=UUE97450.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508710.1;locus_tag=NDY24_16580;product=dephospho-CoA kinase;protein_id=UUE97450.1;transl_table=11 CP098602.1 Genbank gene 3785646 3786509 . - . ID=gene-NDY24_16585;Name=NDY24_16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16585 CP098602.1 Protein Homology CDS 3785646 3786509 . - 0 ID=cds-UUE97451.1;Parent=gene-NDY24_16585;Dbxref=NCBI_GP:UUE97451.1;Name=UUE97451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302544.1;locus_tag=NDY24_16585;product=A24 family peptidase;protein_id=UUE97451.1;transl_table=11 CP098602.1 Genbank gene 3786516 3787775 . - . ID=gene-NDY24_16590;Name=NDY24_16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16590 CP098602.1 Protein Homology CDS 3786516 3787775 . - 0 ID=cds-UUE97452.1;Parent=gene-NDY24_16590;Dbxref=NCBI_GP:UUE97452.1;Name=UUE97452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437601.1;locus_tag=NDY24_16590;product=type II secretion system F family protein;protein_id=UUE97452.1;transl_table=11 CP098602.1 Genbank gene 3788127 3788552 . + . ID=gene-NDY24_16595;Name=NDY24_16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16595 CP098602.1 Protein Homology CDS 3788127 3788552 . + 0 ID=cds-UUE97453.1;Parent=gene-NDY24_16595;Dbxref=NCBI_GP:UUE97453.1;Name=UUE97453.1;Ontology_term=GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363792.1;locus_tag=NDY24_16595;product=pilin;protein_id=UUE97453.1;transl_table=11 CP098602.1 Genbank gene 3788684 3789904 . + . ID=gene-NDY24_16600;Name=NDY24_16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16600 CP098602.1 Protein Homology CDS 3788684 3789904 . + 0 ID=cds-UUE97454.1;Parent=gene-NDY24_16600;Dbxref=NCBI_GP:UUE97454.1;Name=UUE97454.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: protein motif:HMM:NF013080.2;locus_tag=NDY24_16600;product=sulfatase-like hydrolase/transferase;protein_id=UUE97454.1;transl_table=11 CP098602.1 Genbank gene 3789831 3790274 . + . ID=gene-NDY24_16605;Name=NDY24_16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16605 CP098602.1 Protein Homology CDS 3789831 3790274 . + 0 ID=cds-UUE97455.1;Parent=gene-NDY24_16605;Dbxref=NCBI_GP:UUE97455.1;Name=UUE97455.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: protein motif:HMM:NF013080.2;locus_tag=NDY24_16605;product=sulfatase-like hydrolase/transferase;protein_id=UUE97455.1;transl_table=11 CP098602.1 Genbank gene 3790326 3790913 . + . ID=gene-NDY24_16610;Name=NDY24_16610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16610 CP098602.1 GeneMarkS-2+ CDS 3790326 3790913 . + 0 ID=cds-UUE97456.1;Parent=gene-NDY24_16610;Dbxref=NCBI_GP:UUE97456.1;Name=UUE97456.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_16610;product=hypothetical protein;protein_id=UUE97456.1;transl_table=11 CP098602.1 Genbank gene 3790910 3791704 . + . ID=gene-NDY24_16615;Name=NDY24_16615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16615 CP098602.1 GeneMarkS-2+ CDS 3790910 3791704 . + 0 ID=cds-UUE97457.1;Parent=gene-NDY24_16615;Dbxref=NCBI_GP:UUE97457.1;Name=UUE97457.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_16615;product=hypothetical protein;protein_id=UUE97457.1;transl_table=11 CP098602.1 Genbank gene 3791834 3792328 . + . ID=gene-NDY24_16620;Name=NDY24_16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16620 CP098602.1 Protein Homology CDS 3791834 3792328 . + 0 ID=cds-UUE97458.1;Parent=gene-NDY24_16620;Dbxref=NCBI_GP:UUE97458.1;Name=UUE97458.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013713.2;locus_tag=NDY24_16620;product=hypothetical protein;protein_id=UUE97458.1;transl_table=11 CP098602.1 Genbank pseudogene 3792454 3794192 . + . ID=gene-NDY24_16625;Name=pilB;gbkey=Gene;gene=pilB;gene_biotype=pseudogene;locus_tag=NDY24_16625;pseudo=true CP098602.1 Protein Homology CDS 3792454 3794192 . + 0 ID=cds-NDY24_16625;Parent=gene-NDY24_16625;Note=frameshifted;Ontology_term=GO:0009297,GO:0016887;gbkey=CDS;gene=pilB;go_function=ATP hydrolysis activity|0016887||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437606.1;locus_tag=NDY24_16625;product=type IV-A pilus assembly ATPase PilB;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3794201 3794818 . - . ID=gene-NDY24_16630;Name=NDY24_16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16630 CP098602.1 Protein Homology CDS 3794201 3794818 . - 0 ID=cds-UUE97459.1;Parent=gene-NDY24_16630;Dbxref=NCBI_GP:UUE97459.1;Name=UUE97459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003477095.1;locus_tag=NDY24_16630;product=Fic family protein;protein_id=UUE97459.1;transl_table=11 CP098602.1 Genbank gene 3794815 3794997 . - . ID=gene-NDY24_16635;Name=NDY24_16635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16635 CP098602.1 Protein Homology CDS 3794815 3794997 . - 0 ID=cds-UUE97460.1;Parent=gene-NDY24_16635;Dbxref=NCBI_GP:UUE97460.1;Name=UUE97460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812262.1;locus_tag=NDY24_16635;product=YhfG family protein;protein_id=UUE97460.1;transl_table=11 CP098602.1 Genbank gene 3795071 3796465 . - . ID=gene-NDY24_16640;Name=NDY24_16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16640 CP098602.1 Protein Homology CDS 3795071 3796465 . - 0 ID=cds-UUE97461.1;Parent=gene-NDY24_16640;Dbxref=NCBI_GP:UUE97461.1;Name=UUE97461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003094694.1;locus_tag=NDY24_16640;product=sigma-54 dependent transcriptional regulator;protein_id=UUE97461.1;transl_table=11 CP098602.1 Genbank gene 3796611 3798224 . - . ID=gene-NDY24_16645;Name=NDY24_16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16645 CP098602.1 Protein Homology CDS 3796611 3798224 . - 0 ID=cds-UUE97462.1;Parent=gene-NDY24_16645;Dbxref=NCBI_GP:UUE97462.1;Name=UUE97462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348336.1;locus_tag=NDY24_16645;product=HAMP domain-containing histidine kinase;protein_id=UUE97462.1;transl_table=11 CP098602.1 Genbank gene 3798457 3799626 . + . ID=gene-NDY24_16650;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=NDY24_16650 CP098602.1 Protein Homology CDS 3798457 3799626 . + 0 ID=cds-UUE97463.1;Parent=gene-NDY24_16650;Dbxref=NCBI_GP:UUE97463.1;Name=UUE97463.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019183942.1;locus_tag=NDY24_16650;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=UUE97463.1;transl_table=11 CP098602.1 Genbank pseudogene 3799651 3800523 . + . ID=gene-NDY24_16655;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=pseudogene;locus_tag=NDY24_16655;pseudo=true CP098602.1 Protein Homology CDS 3799651 3800523 . + 0 ID=cds-NDY24_16655;Parent=gene-NDY24_16655;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812253.1;locus_tag=NDY24_16655;product=succinate--CoA ligase subunit alpha;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3800709 3801515 . - . ID=gene-NDY24_16660;Name=NDY24_16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16660 CP098602.1 Protein Homology CDS 3800709 3801515 . - 0 ID=cds-UUE97464.1;Parent=gene-NDY24_16660;Dbxref=NCBI_GP:UUE97464.1;Name=UUE97464.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=NDY24_16660;product=LysR substrate-binding domain-containing protein;protein_id=UUE97464.1;transl_table=11 CP098602.1 Genbank gene 3801732 3802112 . + . ID=gene-NDY24_16665;Name=NDY24_16665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16665 CP098602.1 GeneMarkS-2+ CDS 3801732 3802112 . + 0 ID=cds-UUE97465.1;Parent=gene-NDY24_16665;Dbxref=NCBI_GP:UUE97465.1;Name=UUE97465.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_16665;product=hypothetical protein;protein_id=UUE97465.1;transl_table=11 CP098602.1 Genbank gene 3802109 3802375 . + . ID=gene-NDY24_16670;Name=NDY24_16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16670 CP098602.1 GeneMarkS-2+ CDS 3802109 3802375 . + 0 ID=cds-UUE97466.1;Parent=gene-NDY24_16670;Dbxref=NCBI_GP:UUE97466.1;Name=UUE97466.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_16670;product=hypothetical protein;protein_id=UUE97466.1;transl_table=11 CP098602.1 Genbank gene 3802799 3803620 . + . ID=gene-NDY24_16675;Name=NDY24_16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16675 CP098602.1 Protein Homology CDS 3802799 3803620 . + 0 ID=cds-UUE97467.1;Parent=gene-NDY24_16675;Dbxref=NCBI_GP:UUE97467.1;Name=UUE97467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451883.1;locus_tag=NDY24_16675;product=MBL fold metallo-hydrolase;protein_id=UUE97467.1;transl_table=11 CP098602.1 Genbank gene 3803625 3804020 . + . ID=gene-NDY24_16680;Name=NDY24_16680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16680 CP098602.1 Protein Homology CDS 3803625 3804020 . + 0 ID=cds-UUE97468.1;Parent=gene-NDY24_16680;Dbxref=NCBI_GP:UUE97468.1;Name=UUE97468.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024092.2;locus_tag=NDY24_16680;product=nuclear transport factor 2 family protein;protein_id=UUE97468.1;transl_table=11 CP098602.1 Genbank gene 3804225 3804419 . + . ID=gene-NDY24_16685;Name=NDY24_16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16685 CP098602.1 GeneMarkS-2+ CDS 3804225 3804419 . + 0 ID=cds-UUE97469.1;Parent=gene-NDY24_16685;Dbxref=NCBI_GP:UUE97469.1;Name=UUE97469.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_16685;product=hypothetical protein;protein_id=UUE97469.1;transl_table=11 CP098602.1 Genbank gene 3804513 3806153 . + . ID=gene-NDY24_16690;Name=NDY24_16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16690 CP098602.1 Protein Homology CDS 3804513 3806153 . + 0 ID=cds-UUE97470.1;Parent=gene-NDY24_16690;Dbxref=NCBI_GP:UUE97470.1;Name=UUE97470.1;Ontology_term=GO:0009435,GO:0003952,GO:0005524;gbkey=CDS;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,ATP binding|0005524||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915802.1;locus_tag=NDY24_16690;product=NAD+ synthase;protein_id=UUE97470.1;transl_table=11 CP098602.1 Genbank gene 3806147 3807124 . - . ID=gene-NDY24_16695;Name=NDY24_16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16695 CP098602.1 Protein Homology CDS 3806147 3807124 . - 0 ID=cds-UUE97471.1;Parent=gene-NDY24_16695;Dbxref=NCBI_GP:UUE97471.1;Name=UUE97471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005992839.1;locus_tag=NDY24_16695;product=hypothetical protein;protein_id=UUE97471.1;transl_table=11 CP098602.1 Genbank gene 3807469 3808350 . - . ID=gene-NDY24_16700;Name=NDY24_16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16700 CP098602.1 Protein Homology CDS 3807469 3808350 . - 0 ID=cds-UUE97472.1;Parent=gene-NDY24_16700;Dbxref=NCBI_GP:UUE97472.1;Name=UUE97472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155156.1;locus_tag=NDY24_16700;product=outer membrane protein assembly factor BamD;protein_id=UUE97472.1;transl_table=11 CP098602.1 Genbank gene 3808470 3809465 . + . ID=gene-NDY24_16705;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=NDY24_16705 CP098602.1 Protein Homology CDS 3808470 3809465 . + 0 ID=cds-UUE97473.1;Parent=gene-NDY24_16705;Dbxref=NCBI_GP:UUE97473.1;Name=UUE97473.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005992848.1;locus_tag=NDY24_16705;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=UUE97473.1;transl_table=11 CP098602.1 Genbank pseudogene 3809467 3810283 . + . ID=gene-NDY24_16710;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=pseudogene;locus_tag=NDY24_16710;pseudo=true CP098602.1 Protein Homology CDS 3809467 3810283 . + 0 ID=cds-NDY24_16710;Parent=gene-NDY24_16710;Note=frameshifted;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155158.1;locus_tag=NDY24_16710;product=peptidoglycan editing factor PgeF;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 3810286 3810811 . + . ID=gene-NDY24_16715;Name=NDY24_16715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_16715;pseudo=true CP098602.1 Protein Homology CDS 3810286 3810811 . + 0 ID=cds-NDY24_16715;Parent=gene-NDY24_16715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008577794.1;locus_tag=NDY24_16715;product=DUF4166 domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3810927 3811352 . + . ID=gene-NDY24_16720;Name=NDY24_16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16720 CP098602.1 Protein Homology CDS 3810927 3811352 . + 0 ID=cds-UUE97474.1;Parent=gene-NDY24_16720;Dbxref=NCBI_GP:UUE97474.1;Name=UUE97474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504305.1;locus_tag=NDY24_16720;product=thiol-disulfide oxidoreductase DCC family protein;protein_id=UUE97474.1;transl_table=11 CP098602.1 Genbank gene 3811614 3813482 . - . ID=gene-NDY24_16725;Name=NDY24_16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16725 CP098602.1 Protein Homology CDS 3811614 3813482 . - 0 ID=cds-UUE97475.1;Parent=gene-NDY24_16725;Dbxref=NCBI_GP:UUE97475.1;Name=UUE97475.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038199.1;locus_tag=NDY24_16725;product=methyl-accepting chemotaxis protein;protein_id=UUE97475.1;transl_table=11 CP098602.1 Genbank gene 3813916 3816354 . - . ID=gene-NDY24_16730;Name=NDY24_16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16730 CP098602.1 Protein Homology CDS 3813916 3816354 . - 0 ID=cds-UUF00449.1;Parent=gene-NDY24_16730;Dbxref=NCBI_GP:UUF00449.1;Name=UUF00449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171800.1;locus_tag=NDY24_16730;product=glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase;protein_id=UUF00449.1;transl_table=11 CP098602.1 Genbank gene 3816963 3818330 . - . ID=gene-NDY24_16735;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=NDY24_16735 CP098602.1 Protein Homology CDS 3816963 3818330 . - 0 ID=cds-UUE97476.1;Parent=gene-NDY24_16735;Dbxref=NCBI_GP:UUE97476.1;Name=UUE97476.1;Ontology_term=GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156978.1;locus_tag=NDY24_16735;product=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming);protein_id=UUE97476.1;transl_table=11 CP098602.1 Genbank gene 3818327 3820105 . - . ID=gene-NDY24_16740;Name=NDY24_16740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16740 CP098602.1 Protein Homology CDS 3818327 3820105 . - 0 ID=cds-UUE97477.1;Parent=gene-NDY24_16740;Dbxref=NCBI_GP:UUE97477.1;Name=UUE97477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901287.1;locus_tag=NDY24_16740;product=glycoside hydrolase family 15 protein;protein_id=UUE97477.1;transl_table=11 CP098602.1 Genbank pseudogene 3820154 3820912 . - . ID=gene-NDY24_16745;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=pseudogene;locus_tag=NDY24_16745;pseudo=true CP098602.1 Protein Homology CDS 3820154 3820912 . - 0 ID=cds-NDY24_16745;Parent=gene-NDY24_16745;Note=frameshifted;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038195.1;locus_tag=NDY24_16745;product=trehalose-phosphatase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 3821145 3823578 . - . ID=gene-NDY24_16750;Name=NDY24_16750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_16750;pseudo=true CP098602.1 Protein Homology CDS 3821145 3823578 . - 0 ID=cds-NDY24_16750;Parent=gene-NDY24_16750;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158509.1;locus_tag=NDY24_16750;product=TonB-dependent receptor;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3823807 3824280 . + . ID=gene-NDY24_16755;Name=NDY24_16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16755 CP098602.1 Protein Homology CDS 3823807 3824280 . + 0 ID=cds-UUE97478.1;Parent=gene-NDY24_16755;Dbxref=NCBI_GP:UUE97478.1;Name=UUE97478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156981.1;locus_tag=NDY24_16755;product=DUF3574 domain-containing protein;protein_id=UUE97478.1;transl_table=11 CP098602.1 Genbank gene 3824316 3825176 . + . ID=gene-NDY24_16760;Name=NDY24_16760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16760 CP098602.1 Protein Homology CDS 3824316 3825176 . + 0 ID=cds-UUE97479.1;Parent=gene-NDY24_16760;Dbxref=NCBI_GP:UUE97479.1;Name=UUE97479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165919.1;locus_tag=NDY24_16760;product=hypothetical protein;protein_id=UUE97479.1;transl_table=11 CP098602.1 Genbank gene 3825324 3826925 . + . ID=gene-NDY24_16765;Name=NDY24_16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16765 CP098602.1 Protein Homology CDS 3825324 3826925 . + 0 ID=cds-UUE97480.1;Parent=gene-NDY24_16765;Dbxref=NCBI_GP:UUE97480.1;Name=UUE97480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156983.1;locus_tag=NDY24_16765;product=hypothetical protein;protein_id=UUE97480.1;transl_table=11 CP098602.1 Genbank gene 3826922 3828091 . + . ID=gene-NDY24_16770;Name=NDY24_16770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16770 CP098602.1 Protein Homology CDS 3826922 3828091 . + 0 ID=cds-UUE97481.1;Parent=gene-NDY24_16770;Dbxref=NCBI_GP:UUE97481.1;Name=UUE97481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448803.1;locus_tag=NDY24_16770;product=lysozyme inhibitor LprI family protein;protein_id=UUE97481.1;transl_table=11 CP098602.1 Genbank gene 3828489 3829304 . + . ID=gene-NDY24_16775;Name=NDY24_16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16775 CP098602.1 Protein Homology CDS 3828489 3829304 . + 0 ID=cds-UUE97482.1;Parent=gene-NDY24_16775;Dbxref=NCBI_GP:UUE97482.1;Name=UUE97482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172113.1;locus_tag=NDY24_16775;product=DUF3014 domain-containing protein;protein_id=UUE97482.1;transl_table=11 CP098602.1 Genbank gene 3829450 3830157 . - . ID=gene-NDY24_16780;Name=NDY24_16780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16780 CP098602.1 Protein Homology CDS 3829450 3830157 . - 0 ID=cds-UUE97483.1;Parent=gene-NDY24_16780;Dbxref=NCBI_GP:UUE97483.1;Name=UUE97483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812100.1;locus_tag=NDY24_16780;product=glutathione S-transferase;protein_id=UUE97483.1;transl_table=11 CP098602.1 Genbank gene 3830203 3830511 . - . ID=gene-NDY24_16785;Name=NDY24_16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16785 CP098602.1 Protein Homology CDS 3830203 3830511 . - 0 ID=cds-UUE97484.1;Parent=gene-NDY24_16785;Dbxref=NCBI_GP:UUE97484.1;Name=UUE97484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038187.1;locus_tag=NDY24_16785;product=GIY-YIG nuclease family protein;protein_id=UUE97484.1;transl_table=11 CP098602.1 Genbank pseudogene 3830881 3833041 . + . ID=gene-NDY24_16790;Name=NDY24_16790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_16790;pseudo=true CP098602.1 Protein Homology CDS 3830881 3833041 . + 0 ID=cds-NDY24_16790;Parent=gene-NDY24_16790;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915762.1;locus_tag=NDY24_16790;product=TonB-dependent receptor;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3833106 3834434 . + . ID=gene-NDY24_16795;Name=NDY24_16795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16795 CP098602.1 Protein Homology CDS 3833106 3834434 . + 0 ID=cds-UUE97485.1;Parent=gene-NDY24_16795;Dbxref=NCBI_GP:UUE97485.1;Name=UUE97485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901309.1;locus_tag=NDY24_16795;product=LLM class flavin-dependent oxidoreductase;protein_id=UUE97485.1;transl_table=11 CP098602.1 Genbank gene 3834451 3835491 . + . ID=gene-NDY24_16800;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=NDY24_16800 CP098602.1 Protein Homology CDS 3834451 3835491 . + 0 ID=cds-UUE97486.1;Parent=gene-NDY24_16800;Dbxref=NCBI_GP:UUE97486.1;Name=UUE97486.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488911.1;locus_tag=NDY24_16800;product=L-glyceraldehyde 3-phosphate reductase;protein_id=UUE97486.1;transl_table=11 CP098602.1 Genbank gene 3835503 3836486 . + . ID=gene-NDY24_16805;Name=NDY24_16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16805 CP098602.1 Protein Homology CDS 3835503 3836486 . + 0 ID=cds-UUE97487.1;Parent=gene-NDY24_16805;Dbxref=NCBI_GP:UUE97487.1;Name=UUE97487.1;Ontology_term=GO:0042626,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901311.1;locus_tag=NDY24_16805;product=aliphatic sulfonate ABC transporter substrate-binding protein;protein_id=UUE97487.1;transl_table=11 CP098602.1 Genbank gene 3836594 3837388 . + . ID=gene-NDY24_16810;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=NDY24_16810 CP098602.1 Protein Homology CDS 3836594 3837388 . + 0 ID=cds-UUE97488.1;Parent=gene-NDY24_16810;Dbxref=NCBI_GP:UUE97488.1;Name=UUE97488.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ssuC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117872.1;locus_tag=NDY24_16810;product=aliphatic sulfonate ABC transporter permease SsuC;protein_id=UUE97488.1;transl_table=11 CP098602.1 Genbank gene 3837385 3838221 . + . ID=gene-NDY24_16815;Name=NDY24_16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16815 CP098602.1 Protein Homology CDS 3837385 3838221 . + 0 ID=cds-UUE97489.1;Parent=gene-NDY24_16815;Dbxref=NCBI_GP:UUE97489.1;Name=UUE97489.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488905.1;locus_tag=NDY24_16815;product=ATP-binding cassette domain-containing protein;protein_id=UUE97489.1;transl_table=11 CP098602.1 Genbank gene 3838445 3841030 . + . ID=gene-NDY24_16820;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=NDY24_16820 CP098602.1 Protein Homology CDS 3838445 3841030 . + 0 ID=cds-UUE97490.1;Parent=gene-NDY24_16820;Dbxref=NCBI_GP:UUE97490.1;Name=UUE97490.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363370.1;locus_tag=NDY24_16820;product=ATP-dependent chaperone ClpB;protein_id=UUE97490.1;transl_table=11 CP098602.1 Genbank gene 3841244 3842530 . + . ID=gene-NDY24_16825;Name=NDY24_16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16825 CP098602.1 Protein Homology CDS 3841244 3842530 . + 0 ID=cds-UUE97491.1;Parent=gene-NDY24_16825;Dbxref=NCBI_GP:UUE97491.1;Name=UUE97491.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038183.1;locus_tag=NDY24_16825;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=UUE97491.1;transl_table=11 CP098602.1 cmsearch riboswitch 3843393 3843616 . + . ID=id-CP098602.1:3843393..3843616;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP098602.1 Genbank gene 3843732 3845609 . + . ID=gene-NDY24_16830;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=NDY24_16830 CP098602.1 Protein Homology CDS 3843732 3845609 . + 0 ID=cds-UUE97492.1;Parent=gene-NDY24_16830;Dbxref=NCBI_GP:UUE97492.1;Name=UUE97492.1;Ontology_term=GO:0015889,GO:0015420,GO:0019867;gbkey=CDS;gene=btuB;go_component=outer membrane|0019867||IEA;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117952.1;locus_tag=NDY24_16830;product=TonB-dependent vitamin B12 receptor;protein_id=UUE97492.1;transl_table=11 CP098602.1 Genbank pseudogene 3845803 3846214 . + . ID=gene-NDY24_16835;Name=NDY24_16835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_16835;pseudo=true CP098602.1 Protein Homology CDS 3845803 3846214 . + 0 ID=cds-NDY24_16835;Parent=gene-NDY24_16835;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488884.1;locus_tag=NDY24_16835;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3846211 3847257 . + . ID=gene-NDY24_16840;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=NDY24_16840 CP098602.1 Protein Homology CDS 3846211 3847257 . + 0 ID=cds-UUE97493.1;Parent=gene-NDY24_16840;Dbxref=NCBI_GP:UUE97493.1;Name=UUE97493.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452414.1;locus_tag=NDY24_16840;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=UUE97493.1;transl_table=11 CP098602.1 Genbank pseudogene 3847254 3847448 . + . ID=gene-NDY24_16845;Name=NDY24_16845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_16845;pseudo=true CP098602.1 Protein Homology CDS 3847254 3847448 . + 0 ID=cds-NDY24_16845;Parent=gene-NDY24_16845;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924543.1;locus_tag=NDY24_16845;product=histidine phosphatase family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3847559 3848449 . + . ID=gene-NDY24_16850;Name=NDY24_16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16850 CP098602.1 Protein Homology CDS 3847559 3848449 . + 0 ID=cds-UUE97494.1;Parent=gene-NDY24_16850;Dbxref=NCBI_GP:UUE97494.1;Name=UUE97494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348303.1;locus_tag=NDY24_16850;product=GyrI-like domain-containing protein;protein_id=UUE97494.1;transl_table=11 CP098602.1 Genbank gene 3848660 3850102 . - . ID=gene-NDY24_16855;Name=NDY24_16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16855 CP098602.1 Protein Homology CDS 3848660 3850102 . - 0 ID=cds-UUE97495.1;Parent=gene-NDY24_16855;Dbxref=NCBI_GP:UUE97495.1;Name=UUE97495.1;Ontology_term=GO:0030245,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=cellulose catabolic process|0030245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508753.1;locus_tag=NDY24_16855;product=glycoside hydrolase family 6 protein;protein_id=UUE97495.1;transl_table=11 CP098602.1 Genbank gene 3850383 3850982 . - . ID=gene-NDY24_16860;Name=NDY24_16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16860 CP098602.1 GeneMarkS-2+ CDS 3850383 3850982 . - 0 ID=cds-UUE97496.1;Parent=gene-NDY24_16860;Dbxref=NCBI_GP:UUE97496.1;Name=UUE97496.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_16860;product=hypothetical protein;protein_id=UUE97496.1;transl_table=11 CP098602.1 Genbank pseudogene 3851726 3852293 . + . ID=gene-NDY24_16865;Name=NDY24_16865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_16865;pseudo=true CP098602.1 Protein Homology CDS 3851726 3852293 . + 0 ID=cds-NDY24_16865;Parent=gene-NDY24_16865;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802850.1;locus_tag=NDY24_16865;product=IS5 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3852354 3853574 . - . ID=gene-NDY24_16870;Name=NDY24_16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16870 CP098602.1 Protein Homology CDS 3852354 3853574 . - 0 ID=cds-UUE97497.1;Parent=gene-NDY24_16870;Dbxref=NCBI_GP:UUE97497.1;Name=UUE97497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002807763.1;locus_tag=NDY24_16870;product=type III PLP-dependent enzyme;protein_id=UUE97497.1;transl_table=11 CP098602.1 Genbank gene 3853571 3855340 . - . ID=gene-NDY24_16875;Name=NDY24_16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16875 CP098602.1 Protein Homology CDS 3853571 3855340 . - 0 ID=cds-UUE97498.1;Parent=gene-NDY24_16875;Dbxref=NCBI_GP:UUE97498.1;Name=UUE97498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850679.1;locus_tag=NDY24_16875;product=iron transporter;protein_id=UUE97498.1;transl_table=11 CP098602.1 Genbank gene 3855318 3856526 . - . ID=gene-NDY24_16880;Name=NDY24_16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16880 CP098602.1 Protein Homology CDS 3855318 3856526 . - 0 ID=cds-UUE97499.1;Parent=gene-NDY24_16880;Dbxref=NCBI_GP:UUE97499.1;Name=UUE97499.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160094.1;locus_tag=NDY24_16880;product=MFS transporter;protein_id=UUE97499.1;transl_table=11 CP098602.1 Genbank gene 3856523 3858325 . - . ID=gene-NDY24_16885;Name=NDY24_16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16885 CP098602.1 Protein Homology CDS 3856523 3858325 . - 0 ID=cds-UUE97500.1;Parent=gene-NDY24_16885;Dbxref=NCBI_GP:UUE97500.1;Name=UUE97500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366987.1;locus_tag=NDY24_16885;product=IucA/IucC family siderophore biosynthesis protein;protein_id=UUE97500.1;transl_table=11 CP098602.1 Genbank gene 3858322 3859548 . - . ID=gene-NDY24_16890;Name=NDY24_16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16890 CP098602.1 Protein Homology CDS 3858322 3859548 . - 0 ID=cds-UUE97501.1;Parent=gene-NDY24_16890;Dbxref=NCBI_GP:UUE97501.1;Name=UUE97501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452407.1;locus_tag=NDY24_16890;product=siderophore biosynthesis protein PvsA;protein_id=UUE97501.1;transl_table=11 CP098602.1 Genbank gene 3859676 3861934 . - . ID=gene-NDY24_16895;Name=NDY24_16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16895 CP098602.1 Protein Homology CDS 3859676 3861934 . - 0 ID=cds-UUE97502.1;Parent=gene-NDY24_16895;Dbxref=NCBI_GP:UUE97502.1;Name=UUE97502.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: protein motif:HMM:TIGR01783.1;locus_tag=NDY24_16895;product=TonB-dependent siderophore receptor;protein_id=UUE97502.1;transl_table=11 CP098602.1 Genbank gene 3861935 3862696 . - . ID=gene-NDY24_16900;Name=NDY24_16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16900 CP098602.1 Protein Homology CDS 3861935 3862696 . - 0 ID=cds-UUE97503.1;Parent=gene-NDY24_16900;Dbxref=NCBI_GP:UUE97503.1;Name=UUE97503.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913611.1;locus_tag=NDY24_16900;product=aldolase/citrate lyase family protein;protein_id=UUE97503.1;transl_table=11 CP098602.1 Genbank gene 3862914 3864611 . - . ID=gene-NDY24_16905;Name=NDY24_16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16905 CP098602.1 Protein Homology CDS 3862914 3864611 . - 0 ID=cds-UUE97504.1;Parent=gene-NDY24_16905;Dbxref=NCBI_GP:UUE97504.1;Name=UUE97504.1;Ontology_term=GO:0006813,GO:0008324,GO:0015299,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=cation transmembrane transporter activity|0008324||IEA,solute:proton antiporter activity|0015299||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452404.1;locus_tag=NDY24_16905;product=Kef family K(+) transporter;protein_id=UUE97504.1;transl_table=11 CP098602.1 Genbank gene 3865100 3866293 . + . ID=gene-NDY24_16910;Name=NDY24_16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16910 CP098602.1 Protein Homology CDS 3865100 3866293 . + 0 ID=cds-UUE97505.1;Parent=gene-NDY24_16910;Dbxref=NCBI_GP:UUE97505.1;Name=UUE97505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972544.1;locus_tag=NDY24_16910;product=cytochrome P450;protein_id=UUE97505.1;transl_table=11 CP098602.1 Genbank gene 3867110 3869509 . - . ID=gene-NDY24_16915;Name=NDY24_16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16915 CP098602.1 Protein Homology CDS 3867110 3869509 . - 0 ID=cds-UUE97506.1;Parent=gene-NDY24_16915;Dbxref=NCBI_GP:UUE97506.1;Name=UUE97506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090820.1;locus_tag=NDY24_16915;product=TonB-dependent receptor;protein_id=UUE97506.1;transl_table=11 CP098602.1 Genbank gene 3869850 3872237 . - . ID=gene-NDY24_16920;Name=NDY24_16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16920 CP098602.1 Protein Homology CDS 3869850 3872237 . - 0 ID=cds-UUE97507.1;Parent=gene-NDY24_16920;Dbxref=NCBI_GP:UUE97507.1;Name=UUE97507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921435.1;locus_tag=NDY24_16920;product=TonB-dependent receptor;protein_id=UUE97507.1;transl_table=11 CP098602.1 Genbank gene 3872752 3875151 . - . ID=gene-NDY24_16925;Name=NDY24_16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16925 CP098602.1 Protein Homology CDS 3872752 3875151 . - 0 ID=cds-UUE97508.1;Parent=gene-NDY24_16925;Dbxref=NCBI_GP:UUE97508.1;Name=UUE97508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156670.1;locus_tag=NDY24_16925;product=TonB-dependent receptor;protein_id=UUE97508.1;transl_table=11 CP098602.1 Genbank gene 3875337 3877196 . + . ID=gene-NDY24_16930;Name=NDY24_16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16930 CP098602.1 Protein Homology CDS 3875337 3877196 . + 0 ID=cds-UUE97509.1;Parent=gene-NDY24_16930;Dbxref=NCBI_GP:UUE97509.1;Name=UUE97509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924596.1;locus_tag=NDY24_16930;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=UUE97509.1;transl_table=11 CP098602.1 Genbank gene 3877335 3878097 . - . ID=gene-NDY24_16935;Name=NDY24_16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16935 CP098602.1 Protein Homology CDS 3877778 3878097 . - 0 ID=cds-UUE97510.1;Parent=gene-NDY24_16935;Dbxref=NCBI_GP:UUE97510.1;Name=UUE97510.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=NDY24_16935;product=IS5 family transposase;protein_id=UUE97510.1;transl_table=11 CP098602.1 Protein Homology CDS 3877335 3877779 . - 1 ID=cds-UUE97510.1;Parent=gene-NDY24_16935;Dbxref=NCBI_GP:UUE97510.1;Name=UUE97510.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=NDY24_16935;product=IS5 family transposase;protein_id=UUE97510.1;transl_table=11 CP098602.1 Genbank gene 3878284 3879428 . + . ID=gene-NDY24_16940;Name=NDY24_16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16940 CP098602.1 Protein Homology CDS 3878284 3878521 . + 0 ID=cds-UUE97511.1;Parent=gene-NDY24_16940;Dbxref=NCBI_GP:UUE97511.1;Name=UUE97511.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=NDY24_16940;product=IS3 family transposase;protein_id=UUE97511.1;transl_table=11 CP098602.1 Protein Homology CDS 3878521 3879428 . + 2 ID=cds-UUE97511.1;Parent=gene-NDY24_16940;Dbxref=NCBI_GP:UUE97511.1;Name=UUE97511.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=NDY24_16940;product=IS3 family transposase;protein_id=UUE97511.1;transl_table=11 CP098602.1 Genbank gene 3879778 3881022 . - . ID=gene-NDY24_16945;Name=NDY24_16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16945 CP098602.1 Protein Homology CDS 3879778 3881022 . - 0 ID=cds-UUE97512.1;Parent=gene-NDY24_16945;Dbxref=NCBI_GP:UUE97512.1;Name=UUE97512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451728.1;locus_tag=NDY24_16945;product=MFS transporter;protein_id=UUE97512.1;transl_table=11 CP098602.1 Genbank gene 3881507 3881809 . + . ID=gene-NDY24_16950;Name=NDY24_16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16950 CP098602.1 Protein Homology CDS 3881507 3881809 . + 0 ID=cds-UUE97513.1;Parent=gene-NDY24_16950;Dbxref=NCBI_GP:UUE97513.1;Name=UUE97513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451727.1;locus_tag=NDY24_16950;product=zinc ribbon domain-containing protein;protein_id=UUE97513.1;transl_table=11 CP098602.1 Genbank gene 3881905 3882504 . + . ID=gene-NDY24_16955;Name=NDY24_16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16955 CP098602.1 Protein Homology CDS 3881905 3882504 . + 0 ID=cds-UUE97514.1;Parent=gene-NDY24_16955;Dbxref=NCBI_GP:UUE97514.1;Name=UUE97514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451726.1;locus_tag=NDY24_16955;product=hypothetical protein;protein_id=UUE97514.1;transl_table=11 CP098602.1 Genbank gene 3882716 3883489 . - . ID=gene-NDY24_16960;Name=NDY24_16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16960 CP098602.1 Protein Homology CDS 3882716 3883489 . - 0 ID=cds-UUE97515.1;Parent=gene-NDY24_16960;Dbxref=NCBI_GP:UUE97515.1;Name=UUE97515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156660.1;locus_tag=NDY24_16960;product=DUF3011 domain-containing protein;protein_id=UUE97515.1;transl_table=11 CP098602.1 Genbank pseudogene 3883646 3885443 . + . ID=gene-NDY24_16965;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=pseudogene;locus_tag=NDY24_16965;pseudo=true CP098602.1 Protein Homology CDS 3883646 3885443 . + 0 ID=cds-NDY24_16965;Parent=gene-NDY24_16965;Note=frameshifted;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008211013.1;locus_tag=NDY24_16965;product=aspartate--tRNA ligase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3885914 3886441 . + . ID=gene-NDY24_16970;Name=NDY24_16970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16970 CP098602.1 Protein Homology CDS 3885914 3886441 . + 0 ID=cds-UUE97516.1;Parent=gene-NDY24_16970;Dbxref=NCBI_GP:UUE97516.1;Name=UUE97516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159325.1;locus_tag=NDY24_16970;product=GNAT family N-acetyltransferase;protein_id=UUE97516.1;transl_table=11 CP098602.1 Genbank gene 3886505 3887182 . + . ID=gene-NDY24_16975;Name=NDY24_16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16975 CP098602.1 Protein Homology CDS 3886505 3887182 . + 0 ID=cds-UUE97517.1;Parent=gene-NDY24_16975;Dbxref=NCBI_GP:UUE97517.1;Name=UUE97517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156657.1;locus_tag=NDY24_16975;product=alpha/beta fold hydrolase;protein_id=UUE97517.1;transl_table=11 CP098602.1 Genbank gene 3887270 3887998 . + . ID=gene-NDY24_16980;Name=NDY24_16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16980 CP098602.1 Protein Homology CDS 3887270 3887998 . + 0 ID=cds-UUE97518.1;Parent=gene-NDY24_16980;Dbxref=NCBI_GP:UUE97518.1;Name=UUE97518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052063.1;locus_tag=NDY24_16980;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=UUE97518.1;transl_table=11 CP098602.1 Genbank gene 3888128 3888652 . + . ID=gene-NDY24_16985;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=NDY24_16985 CP098602.1 Protein Homology CDS 3888128 3888652 . + 0 ID=cds-UUE97519.1;Parent=gene-NDY24_16985;Dbxref=NCBI_GP:UUE97519.1;Name=UUE97519.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction endodeoxyribonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156655.1;locus_tag=NDY24_16985;product=crossover junction endodeoxyribonuclease RuvC;protein_id=UUE97519.1;transl_table=11 CP098602.1 Genbank gene 3888774 3889355 . + . ID=gene-NDY24_16990;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=NDY24_16990 CP098602.1 Protein Homology CDS 3888774 3889355 . + 0 ID=cds-UUF00450.1;Parent=gene-NDY24_16990;Dbxref=NCBI_GP:UUF00450.1;Name=UUF00450.1;Ontology_term=GO:0006310,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=four-way junction helicase activity|0009378||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258432.1;locus_tag=NDY24_16990;product=Holliday junction branch migration protein RuvA;protein_id=UUF00450.1;transl_table=11 CP098602.1 Genbank gene 3889412 3891319 . + . ID=gene-NDY24_16995;Name=NDY24_16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_16995 CP098602.1 Protein Homology CDS 3889412 3891319 . + 0 ID=cds-UUE97520.1;Parent=gene-NDY24_16995;Dbxref=NCBI_GP:UUE97520.1;Name=UUE97520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156654.1;locus_tag=NDY24_16995;product=potassium transporter Kup;protein_id=UUE97520.1;transl_table=11 CP098602.1 Genbank gene 3891498 3892535 . + . ID=gene-NDY24_17000;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=NDY24_17000 CP098602.1 Protein Homology CDS 3891498 3892535 . + 0 ID=cds-UUE97521.1;Parent=gene-NDY24_17000;Dbxref=NCBI_GP:UUE97521.1;Name=UUE97521.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452374.1;locus_tag=NDY24_17000;product=Holliday junction branch migration DNA helicase RuvB;protein_id=UUE97521.1;transl_table=11 CP098602.1 Genbank gene 3892525 3892956 . + . ID=gene-NDY24_17005;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=NDY24_17005 CP098602.1 Protein Homology CDS 3892525 3892956 . + 0 ID=cds-UUE97522.1;Parent=gene-NDY24_17005;Dbxref=NCBI_GP:UUE97522.1;Name=UUE97522.1;Ontology_term=GO:0005515,GO:0047617,GO:0005737;gbkey=CDS;gene=ybgC;go_component=cytoplasm|0005737||IEA;go_function=protein binding|0005515||IEA,acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019185222.1;locus_tag=NDY24_17005;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=UUE97522.1;transl_table=11 CP098602.1 Genbank gene 3892968 3893747 . + . ID=gene-NDY24_17010;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=NDY24_17010 CP098602.1 Protein Homology CDS 3892968 3893747 . + 0 ID=cds-UUE97523.1;Parent=gene-NDY24_17010;Dbxref=NCBI_GP:UUE97523.1;Name=UUE97523.1;Ontology_term=GO:1902600,GO:0015078,GO:0005887;gbkey=CDS;gene=tolQ;go_component=integral component of plasma membrane|0005887||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913648.1;locus_tag=NDY24_17010;product=protein TolQ;protein_id=UUE97523.1;transl_table=11 CP098602.1 Genbank gene 3893887 3894336 . + . ID=gene-NDY24_17015;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=NDY24_17015 CP098602.1 Protein Homology CDS 3893887 3894336 . + 0 ID=cds-UUE97524.1;Parent=gene-NDY24_17015;Dbxref=NCBI_GP:UUE97524.1;Name=UUE97524.1;Ontology_term=GO:0061024,GO:1902600,GO:0015078,GO:0031237;gbkey=CDS;gene=tolR;go_component=intrinsic component of periplasmic side of plasma membrane|0031237||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=membrane organization|0061024||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913652.1;locus_tag=NDY24_17015;product=protein TolR;protein_id=UUE97524.1;transl_table=11 CP098602.1 Genbank gene 3894326 3895366 . + . ID=gene-NDY24_17020;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=NDY24_17020 CP098602.1 Protein Homology CDS 3894326 3895366 . + 0 ID=cds-UUE97525.1;Parent=gene-NDY24_17020;Dbxref=NCBI_GP:UUE97525.1;Name=UUE97525.1;Ontology_term=GO:0006810,GO:0005215,GO:0031237;gbkey=CDS;gene=tolA;go_component=intrinsic component of periplasmic side of plasma membrane|0031237||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482566.1;locus_tag=NDY24_17020;product=cell envelope integrity protein TolA;protein_id=UUE97525.1;transl_table=11 CP098602.1 Genbank gene 3895524 3896843 . + . ID=gene-NDY24_17025;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=NDY24_17025 CP098602.1 Protein Homology CDS 3895524 3896843 . + 0 ID=cds-UUE97526.1;Parent=gene-NDY24_17025;Dbxref=NCBI_GP:UUE97526.1;Name=UUE97526.1;Ontology_term=GO:0006810,GO:0005215,GO:0030288;gbkey=CDS;gene=tolB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445349.1;locus_tag=NDY24_17025;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=UUE97526.1;transl_table=11 CP098602.1 Genbank gene 3896900 3897418 . + . ID=gene-NDY24_17030;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=NDY24_17030 CP098602.1 Protein Homology CDS 3896900 3897418 . + 0 ID=cds-UUE97527.1;Parent=gene-NDY24_17030;Dbxref=NCBI_GP:UUE97527.1;Name=UUE97527.1;Ontology_term=GO:0009279;gbkey=CDS;gene=pal;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010344309.1;locus_tag=NDY24_17030;product=peptidoglycan-associated lipoprotein Pal;protein_id=UUE97527.1;transl_table=11 CP098602.1 Genbank pseudogene 3897425 3898247 . + . ID=gene-NDY24_17035;Name=ybgF;gbkey=Gene;gene=ybgF;gene_biotype=pseudogene;locus_tag=NDY24_17035;pseudo=true CP098602.1 Protein Homology CDS 3897425 3898247 . + 0 ID=cds-NDY24_17035;Parent=gene-NDY24_17035;Note=frameshifted;Ontology_term=GO:0005515;gbkey=CDS;gene=ybgF;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304871.1;locus_tag=NDY24_17035;product=tol-pal system protein YbgF;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3898290 3898973 . + . ID=gene-NDY24_17040;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=NDY24_17040 CP098602.1 Protein Homology CDS 3898290 3898973 . + 0 ID=cds-UUE97528.1;Parent=gene-NDY24_17040;Dbxref=NCBI_GP:UUE97528.1;Name=UUE97528.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165275.1;locus_tag=NDY24_17040;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=UUE97528.1;transl_table=11 CP098602.1 Genbank gene 3899021 3899887 . - . ID=gene-NDY24_17045;Name=NDY24_17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17045 CP098602.1 Protein Homology CDS 3899021 3899887 . - 0 ID=cds-UUE97529.1;Parent=gene-NDY24_17045;Dbxref=NCBI_GP:UUE97529.1;Name=UUE97529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904338.1;locus_tag=NDY24_17045;product=aldo/keto reductase family oxidoreductase;protein_id=UUE97529.1;transl_table=11 CP098602.1 Genbank gene 3900229 3900304 . - . ID=gene-NDY24_17050;Name=NDY24_17050;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_17050 CP098602.1 tRNAscan-SE tRNA 3900229 3900304 . - . ID=rna-NDY24_17050;Parent=gene-NDY24_17050;anticodon=(pos:complement(3900269..3900271));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_17050;product=tRNA-Lys CP098602.1 tRNAscan-SE exon 3900229 3900304 . - . ID=exon-NDY24_17050-1;Parent=rna-NDY24_17050;anticodon=(pos:complement(3900269..3900271));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_17050;product=tRNA-Lys CP098602.1 Genbank gene 3900352 3901026 . - . ID=gene-NDY24_17055;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=NDY24_17055 CP098602.1 Protein Homology CDS 3900352 3901026 . - 0 ID=cds-UUE97530.1;Parent=gene-NDY24_17055;Dbxref=NCBI_GP:UUE97530.1;Name=UUE97530.1;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038130.1;locus_tag=NDY24_17055;product=7-cyano-7-deazaguanine synthase QueC;protein_id=UUE97530.1;transl_table=11 CP098602.1 Genbank gene 3901326 3902333 . + . ID=gene-NDY24_17060;Name=NDY24_17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17060 CP098602.1 Protein Homology CDS 3901326 3902333 . + 0 ID=cds-UUE97531.1;Parent=gene-NDY24_17060;Dbxref=NCBI_GP:UUE97531.1;Name=UUE97531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448629.1;locus_tag=NDY24_17060;product=PAS domain-containing protein;protein_id=UUE97531.1;transl_table=11 CP098602.1 Genbank gene 3902330 3902689 . + . ID=gene-NDY24_17065;Name=NDY24_17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17065 CP098602.1 Protein Homology CDS 3902330 3902689 . + 0 ID=cds-UUE97532.1;Parent=gene-NDY24_17065;Dbxref=NCBI_GP:UUE97532.1;Name=UUE97532.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364125.1;locus_tag=NDY24_17065;product=response regulator;protein_id=UUE97532.1;transl_table=11 CP098602.1 Genbank pseudogene 3902752 3902955 . + . ID=gene-NDY24_17070;Name=NDY24_17070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_17070;pseudo=true CP098602.1 Protein Homology CDS 3902752 3902955 . + 0 ID=cds-NDY24_17070;Parent=gene-NDY24_17070;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448624.1;locus_tag=NDY24_17070;product=LysE family transporter;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3902983 3903417 . + . ID=gene-NDY24_17075;Name=NDY24_17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17075 CP098602.1 Protein Homology CDS 3902983 3903417 . + 0 ID=cds-UUE97533.1;Parent=gene-NDY24_17075;Dbxref=NCBI_GP:UUE97533.1;Name=UUE97533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448623.1;locus_tag=NDY24_17075;product=GNAT family N-acetyltransferase;protein_id=UUE97533.1;transl_table=11 CP098602.1 Genbank gene 3903616 3905784 . - . ID=gene-NDY24_17080;Name=NDY24_17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17080 CP098602.1 Protein Homology CDS 3903616 3905784 . - 0 ID=cds-UUE97534.1;Parent=gene-NDY24_17080;Dbxref=NCBI_GP:UUE97534.1;Name=UUE97534.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924661.1;locus_tag=NDY24_17080;product=methyl-accepting chemotaxis protein;protein_id=UUE97534.1;transl_table=11 CP098602.1 Genbank gene 3906312 3906518 . - . ID=gene-NDY24_17085;Name=NDY24_17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17085 CP098602.1 Protein Homology CDS 3906312 3906518 . - 0 ID=cds-UUE97535.1;Parent=gene-NDY24_17085;Dbxref=NCBI_GP:UUE97535.1;Name=UUE97535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913665.1;locus_tag=NDY24_17085;product=hypothetical protein;protein_id=UUE97535.1;transl_table=11 CP098602.1 Genbank gene 3906765 3907475 . + . ID=gene-NDY24_17090;Name=NDY24_17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17090 CP098602.1 Protein Homology CDS 3906765 3907475 . + 0 ID=cds-UUE97536.1;Parent=gene-NDY24_17090;Dbxref=NCBI_GP:UUE97536.1;Name=UUE97536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904347.1;locus_tag=NDY24_17090;product=rRNA pseudouridine synthase;protein_id=UUE97536.1;transl_table=11 CP098602.1 Genbank gene 3908024 3908428 . - . ID=gene-NDY24_17095;Name=NDY24_17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17095 CP098602.1 Protein Homology CDS 3908024 3908428 . - 0 ID=cds-UUE97537.1;Parent=gene-NDY24_17095;Dbxref=NCBI_GP:UUE97537.1;Name=UUE97537.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090797.1;locus_tag=NDY24_17095;product=response regulator;protein_id=UUE97537.1;transl_table=11 CP098602.1 Genbank gene 3908507 3908989 . - . ID=gene-NDY24_17100;Name=NDY24_17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17100 CP098602.1 Protein Homology CDS 3908507 3908989 . - 0 ID=cds-UUE97538.1;Parent=gene-NDY24_17100;Dbxref=NCBI_GP:UUE97538.1;Name=UUE97538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155539.1;locus_tag=NDY24_17100;product=hypothetical protein;protein_id=UUE97538.1;transl_table=11 CP098602.1 Genbank gene 3909128 3910930 . - . ID=gene-NDY24_17105;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=NDY24_17105 CP098602.1 Protein Homology CDS 3909128 3910930 . - 0 ID=cds-UUE97539.1;Parent=gene-NDY24_17105;Dbxref=NCBI_GP:UUE97539.1;Name=UUE97539.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155540.1;locus_tag=NDY24_17105;product=DNA helicase RecQ;protein_id=UUE97539.1;transl_table=11 CP098602.1 Genbank gene 3911145 3911663 . - . ID=gene-NDY24_17110;Name=NDY24_17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17110 CP098602.1 Protein Homology CDS 3911145 3911663 . - 0 ID=cds-UUE97540.1;Parent=gene-NDY24_17110;Dbxref=NCBI_GP:UUE97540.1;Name=UUE97540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083813.1;locus_tag=NDY24_17110;product=DNA starvation/stationary phase protection protein;protein_id=UUE97540.1;transl_table=11 CP098602.1 Genbank pseudogene 3911796 3915915 . + . ID=gene-NDY24_17115;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=pseudogene;locus_tag=NDY24_17115;pseudo=true CP098602.1 Protein Homology CDS 3911796 3915915 . + 0 ID=cds-NDY24_17115;Parent=gene-NDY24_17115;Note=frameshifted;Ontology_term=GO:0006139,GO:0004386;gbkey=CDS;gene=hrpA;go_function=helicase activity|0004386||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303863.1;locus_tag=NDY24_17115;product=ATP-dependent RNA helicase HrpA;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3916162 3918798 . - . ID=gene-NDY24_17120;Name=NDY24_17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17120 CP098602.1 Protein Homology CDS 3916162 3918798 . - 0 ID=cds-UUE97541.1;Parent=gene-NDY24_17120;Dbxref=NCBI_GP:UUE97541.1;Name=UUE97541.1;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988680.1;locus_tag=NDY24_17120;product=TonB-dependent receptor;protein_id=UUE97541.1;transl_table=11 CP098602.1 Genbank pseudogene 3918907 3919940 . - . ID=gene-NDY24_17125;Name=NDY24_17125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_17125;pseudo=true CP098602.1 Protein Homology CDS 3918907 3919940 . - 0 ID=cds-NDY24_17125;Parent=gene-NDY24_17125;Note=frameshifted;Ontology_term=GO:0006096,GO:0004340;gbkey=CDS;go_function=glucokinase activity|0004340||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052049.1;locus_tag=NDY24_17125;product=glucokinase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3920218 3920730 . - . ID=gene-NDY24_17130;Name=NDY24_17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17130 CP098602.1 Protein Homology CDS 3920218 3920730 . - 0 ID=cds-UUE97542.1;Parent=gene-NDY24_17130;Dbxref=NCBI_GP:UUE97542.1;Name=UUE97542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482518.1;locus_tag=NDY24_17130;product=hypothetical protein;protein_id=UUE97542.1;transl_table=11 CP098602.1 Genbank gene 3920903 3922027 . - . ID=gene-NDY24_17135;Name=pqqE;gbkey=Gene;gene=pqqE;gene_biotype=protein_coding;locus_tag=NDY24_17135 CP098602.1 Protein Homology CDS 3920903 3922027 . - 0 ID=cds-UUE97543.1;Parent=gene-NDY24_17135;Dbxref=NCBI_GP:UUE97543.1;Name=UUE97543.1;Ontology_term=GO:0018149,GO:0018189;gbkey=CDS;gene=pqqE;go_process=peptide cross-linking|0018149||IEA,pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452763.1;locus_tag=NDY24_17135;product=pyrroloquinoline quinone biosynthesis protein PqqE;protein_id=UUE97543.1;transl_table=11 CP098602.1 Genbank gene 3922024 3922302 . - . ID=gene-NDY24_17140;Name=pqqD;gbkey=Gene;gene=pqqD;gene_biotype=protein_coding;locus_tag=NDY24_17140 CP098602.1 Protein Homology CDS 3922024 3922302 . - 0 ID=cds-UUE97544.1;Parent=gene-NDY24_17140;Dbxref=NCBI_GP:UUE97544.1;Name=UUE97544.1;Ontology_term=GO:0018189,GO:0048038;gbkey=CDS;gene=pqqD;go_function=quinone binding|0048038||IEA;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445334.1;locus_tag=NDY24_17140;product=pyrroloquinoline quinone biosynthesis peptide chaperone PqqD;protein_id=UUE97544.1;transl_table=11 CP098602.1 Genbank gene 3922299 3923051 . - . ID=gene-NDY24_17145;Name=pqqC;gbkey=Gene;gene=pqqC;gene_biotype=protein_coding;locus_tag=NDY24_17145 CP098602.1 Protein Homology CDS 3922299 3923051 . - 0 ID=cds-UUE97545.1;Parent=gene-NDY24_17145;Dbxref=NCBI_GP:UUE97545.1;Name=UUE97545.1;Ontology_term=GO:0018189;gbkey=CDS;gene=pqqC;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437693.1;locus_tag=NDY24_17145;product=pyrroloquinoline-quinone synthase PqqC;protein_id=UUE97545.1;transl_table=11 CP098602.1 Genbank gene 3923048 3923947 . - . ID=gene-NDY24_17150;Name=pqqB;gbkey=Gene;gene=pqqB;gene_biotype=protein_coding;locus_tag=NDY24_17150 CP098602.1 Protein Homology CDS 3923048 3923947 . - 0 ID=cds-UUE97546.1;Parent=gene-NDY24_17150;Dbxref=NCBI_GP:UUE97546.1;Name=UUE97546.1;Ontology_term=GO:0018189;gbkey=CDS;gene=pqqB;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038060.1;locus_tag=NDY24_17150;product=pyrroloquinoline quinone biosynthesis protein PqqB;protein_id=UUE97546.1;transl_table=11 CP098602.1 Genbank gene 3924014 3924094 . - . ID=gene-NDY24_17155;Name=pqqA;gbkey=Gene;gene=pqqA;gene_biotype=protein_coding;locus_tag=NDY24_17155 CP098602.1 Protein Homology CDS 3924014 3924094 . - 0 ID=cds-UUF00451.1;Parent=gene-NDY24_17155;Dbxref=NCBI_GP:UUF00451.1;Name=UUF00451.1;Ontology_term=GO:0018189,GO:0003824;gbkey=CDS;gene=pqqA;go_function=catalytic activity|0003824||IEA;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: protein motif:HMM:TIGR02107.1;locus_tag=NDY24_17155;product=pyrroloquinoline quinone precursor peptide PqqA;protein_id=UUF00451.1;transl_table=11 CP098602.1 Genbank gene 3924384 3926570 . + . ID=gene-NDY24_17160;Name=NDY24_17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17160 CP098602.1 Protein Homology CDS 3924384 3926570 . + 0 ID=cds-UUE97547.1;Parent=gene-NDY24_17160;Dbxref=NCBI_GP:UUE97547.1;Name=UUE97547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090786.1;locus_tag=NDY24_17160;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=UUE97547.1;transl_table=11 CP098602.1 Genbank gene 3926775 3928289 . + . ID=gene-NDY24_17165;Name=NDY24_17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17165 CP098602.1 Protein Homology CDS 3926775 3928289 . + 0 ID=cds-UUE97548.1;Parent=gene-NDY24_17165;Dbxref=NCBI_GP:UUE97548.1;Name=UUE97548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237394.1;locus_tag=NDY24_17165;product=hypothetical protein;protein_id=UUE97548.1;transl_table=11 CP098602.1 Genbank gene 3928439 3930541 . - . ID=gene-NDY24_17170;Name=NDY24_17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17170 CP098602.1 Protein Homology CDS 3928439 3930541 . - 0 ID=cds-UUE97549.1;Parent=gene-NDY24_17170;Dbxref=NCBI_GP:UUE97549.1;Name=UUE97549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463485.1;locus_tag=NDY24_17170;product=glycosyltransferase;protein_id=UUE97549.1;transl_table=11 CP098602.1 Genbank gene 3930637 3933084 . + . ID=gene-NDY24_17175;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=NDY24_17175 CP098602.1 Protein Homology CDS 3930637 3933084 . + 0 ID=cds-UUE97550.1;Parent=gene-NDY24_17175;Dbxref=NCBI_GP:UUE97550.1;Name=UUE97550.1;Ontology_term=GO:0009252,GO:0046677,GO:0008233,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=peptidase activity|0008233||IEA,penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116043.1;locus_tag=NDY24_17175;product=penicillin-binding protein 1B;protein_id=UUE97550.1;transl_table=11 CP098602.1 Genbank gene 3933099 3933626 . + . ID=gene-NDY24_17180;Name=NDY24_17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17180 CP098602.1 Protein Homology CDS 3933099 3933626 . + 0 ID=cds-UUF00452.1;Parent=gene-NDY24_17180;Dbxref=NCBI_GP:UUF00452.1;Name=UUF00452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348248.1;locus_tag=NDY24_17180;product=hypothetical protein;protein_id=UUF00452.1;transl_table=11 CP098602.1 Genbank gene 3933906 3935912 . + . ID=gene-NDY24_17185;Name=NDY24_17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17185 CP098602.1 Protein Homology CDS 3933906 3935912 . + 0 ID=cds-UUE97551.1;Parent=gene-NDY24_17185;Dbxref=NCBI_GP:UUE97551.1;Name=UUE97551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452754.1;locus_tag=NDY24_17185;product=ATP-dependent DNA helicase;protein_id=UUE97551.1;transl_table=11 CP098602.1 Genbank gene 3935836 3936663 . + . ID=gene-NDY24_17190;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=NDY24_17190 CP098602.1 Protein Homology CDS 3935836 3936663 . + 0 ID=cds-UUE97552.1;Parent=gene-NDY24_17190;Dbxref=NCBI_GP:UUE97552.1;Name=UUE97552.1;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258504.1;locus_tag=NDY24_17190;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=UUE97552.1;transl_table=11 CP098602.1 Genbank gene 3937240 3938115 . - . ID=gene-NDY24_17195;Name=NDY24_17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17195 CP098602.1 Protein Homology CDS 3937240 3938115 . - 0 ID=cds-UUE97553.1;Parent=gene-NDY24_17195;Dbxref=NCBI_GP:UUE97553.1;Name=UUE97553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159314.1;locus_tag=NDY24_17195;product=energy transducer TonB;protein_id=UUE97553.1;transl_table=11 CP098602.1 Genbank gene 3938112 3939062 . - . ID=gene-NDY24_17200;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=NDY24_17200 CP098602.1 Protein Homology CDS 3938112 3939062 . - 0 ID=cds-UUE97554.1;Parent=gene-NDY24_17200;Dbxref=NCBI_GP:UUE97554.1;Name=UUE97554.1;Ontology_term=GO:0006750,GO:0004363;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038049.1;locus_tag=NDY24_17200;product=glutathione synthase;protein_id=UUE97554.1;transl_table=11 CP098602.1 Genbank gene 3939299 3939700 . + . ID=gene-NDY24_17205;Name=pilG;gbkey=Gene;gene=pilG;gene_biotype=protein_coding;locus_tag=NDY24_17205 CP098602.1 Protein Homology CDS 3939299 3939700 . + 0 ID=cds-UUE97555.1;Parent=gene-NDY24_17205;Dbxref=NCBI_GP:UUE97555.1;Name=UUE97555.1;gbkey=CDS;gene=pilG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913706.1;locus_tag=NDY24_17205;product=twitching motility response regulator PilG;protein_id=UUE97555.1;transl_table=11 CP098602.1 Genbank gene 3939718 3940080 . + . ID=gene-NDY24_17210;Name=NDY24_17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17210 CP098602.1 Protein Homology CDS 3939718 3940080 . + 0 ID=cds-UUE97556.1;Parent=gene-NDY24_17210;Dbxref=NCBI_GP:UUE97556.1;Name=UUE97556.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450735.1;locus_tag=NDY24_17210;product=response regulator;protein_id=UUE97556.1;transl_table=11 CP098602.1 Genbank gene 3940080 3940610 . + . ID=gene-NDY24_17215;Name=NDY24_17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17215 CP098602.1 Protein Homology CDS 3940080 3940610 . + 0 ID=cds-UUE97557.1;Parent=gene-NDY24_17215;Dbxref=NCBI_GP:UUE97557.1;Name=UUE97557.1;Ontology_term=GO:0006935,GO:0007165;gbkey=CDS;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508568.1;locus_tag=NDY24_17215;product=chemotaxis protein CheW;protein_id=UUE97557.1;transl_table=11 CP098602.1 Genbank gene 3940650 3942686 . + . ID=gene-NDY24_17220;Name=NDY24_17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17220 CP098602.1 Protein Homology CDS 3940650 3942686 . + 0 ID=cds-UUE97558.1;Parent=gene-NDY24_17220;Dbxref=NCBI_GP:UUE97558.1;Name=UUE97558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988635.1;locus_tag=NDY24_17220;product=methyl-accepting chemotaxis protein;protein_id=UUE97558.1;transl_table=11 CP098602.1 Genbank gene 3942802 3950022 . + . ID=gene-NDY24_17225;Name=NDY24_17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17225 CP098602.1 Protein Homology CDS 3942802 3950022 . + 0 ID=cds-UUE97559.1;Parent=gene-NDY24_17225;Dbxref=NCBI_GP:UUE97559.1;Name=UUE97559.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158585.1;locus_tag=NDY24_17225;product=Hpt domain-containing protein;protein_id=UUE97559.1;transl_table=11 CP098602.1 Genbank gene 3950030 3951217 . + . ID=gene-NDY24_17230;Name=NDY24_17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17230 CP098602.1 Protein Homology CDS 3950030 3951217 . + 0 ID=cds-UUF00453.1;Parent=gene-NDY24_17230;Dbxref=NCBI_GP:UUF00453.1;Name=UUF00453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988631.1;locus_tag=NDY24_17230;product=chemotaxis protein;protein_id=UUF00453.1;transl_table=11 CP098602.1 Genbank gene 3951252 3951728 . + . ID=gene-NDY24_17235;Name=NDY24_17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17235 CP098602.1 Protein Homology CDS 3951252 3951728 . + 0 ID=cds-UUE97560.1;Parent=gene-NDY24_17235;Dbxref=NCBI_GP:UUE97560.1;Name=UUE97560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482475.1;locus_tag=NDY24_17235;product=chemotaxis protein CheW;protein_id=UUE97560.1;transl_table=11 CP098602.1 Genbank gene 3951759 3952352 . + . ID=gene-NDY24_17240;Name=NDY24_17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17240 CP098602.1 Protein Homology CDS 3951759 3952352 . + 0 ID=cds-UUF00454.1;Parent=gene-NDY24_17240;Dbxref=NCBI_GP:UUF00454.1;Name=UUF00454.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450741.1;locus_tag=NDY24_17240;product=GNAT family N-acetyltransferase;protein_id=UUF00454.1;transl_table=11 CP098602.1 Genbank gene 3952559 3952819 . - . ID=gene-NDY24_17245;Name=NDY24_17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17245 CP098602.1 GeneMarkS-2+ CDS 3952559 3952819 . - 0 ID=cds-UUE97561.1;Parent=gene-NDY24_17245;Dbxref=NCBI_GP:UUE97561.1;Name=UUE97561.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_17245;product=hypothetical protein;protein_id=UUE97561.1;transl_table=11 CP098602.1 Genbank gene 3953550 3954278 . - . ID=gene-NDY24_17250;Name=NDY24_17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17250 CP098602.1 GeneMarkS-2+ CDS 3953550 3954278 . - 0 ID=cds-UUE97562.1;Parent=gene-NDY24_17250;Dbxref=NCBI_GP:UUE97562.1;Name=UUE97562.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_17250;product=hypothetical protein;protein_id=UUE97562.1;transl_table=11 CP098602.1 Genbank gene 3954365 3954937 . - . ID=gene-NDY24_17255;Name=NDY24_17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17255 CP098602.1 Protein Homology CDS 3954365 3954937 . - 0 ID=cds-UUE97563.1;Parent=gene-NDY24_17255;Dbxref=NCBI_GP:UUE97563.1;Name=UUE97563.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription%2C initiation|0006352||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437708.1;locus_tag=NDY24_17255;product=sigma-70 family RNA polymerase sigma factor;protein_id=UUE97563.1;transl_table=11 CP098602.1 Genbank gene 3954967 3956781 . - . ID=gene-NDY24_17260;Name=NDY24_17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17260 CP098602.1 Protein Homology CDS 3954967 3956781 . - 0 ID=cds-UUE97564.1;Parent=gene-NDY24_17260;Dbxref=NCBI_GP:UUE97564.1;Name=UUE97564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437709.1;locus_tag=NDY24_17260;product=VWA domain-containing protein;protein_id=UUE97564.1;transl_table=11 CP098602.1 Genbank gene 3957162 3958226 . + . ID=gene-NDY24_17265;Name=NDY24_17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17265 CP098602.1 Protein Homology CDS 3957162 3958226 . + 0 ID=cds-UUE97565.1;Parent=gene-NDY24_17265;Dbxref=NCBI_GP:UUE97565.1;Name=UUE97565.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038037.1;locus_tag=NDY24_17265;product=isoaspartyl peptidase/L-asparaginase;protein_id=UUE97565.1;transl_table=11 CP098602.1 Genbank pseudogene 3958223 3958953 . + . ID=gene-NDY24_17270;Name=NDY24_17270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_17270;pseudo=true CP098602.1 Protein Homology CDS 3958223 3958953 . + 0 ID=cds-NDY24_17270;Parent=gene-NDY24_17270;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159311.1;locus_tag=NDY24_17270;product=copper homeostasis protein CutC;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3959574 3960659 . - . ID=gene-NDY24_17275;Name=NDY24_17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17275 CP098602.1 Protein Homology CDS 3959574 3960659 . - 0 ID=cds-UUE97566.1;Parent=gene-NDY24_17275;Dbxref=NCBI_GP:UUE97566.1;Name=UUE97566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437713.1;locus_tag=NDY24_17275;product=exo-alpha-sialidase;protein_id=UUE97566.1;transl_table=11 CP098602.1 Genbank gene 3961063 3961392 . + . ID=gene-NDY24_17280;Name=NDY24_17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17280 CP098602.1 Protein Homology CDS 3961063 3961392 . + 0 ID=cds-UUE97567.1;Parent=gene-NDY24_17280;Dbxref=NCBI_GP:UUE97567.1;Name=UUE97567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155568.1;locus_tag=NDY24_17280;product=RebB family R body protein;protein_id=UUE97567.1;transl_table=11 CP098602.1 Genbank gene 3961449 3961664 . - . ID=gene-NDY24_17285;Name=NDY24_17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17285 CP098602.1 Protein Homology CDS 3961449 3961664 . - 0 ID=cds-UUE97568.1;Parent=gene-NDY24_17285;Dbxref=NCBI_GP:UUE97568.1;Name=UUE97568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408193.1;locus_tag=NDY24_17285;product=hypothetical protein;protein_id=UUE97568.1;transl_table=11 CP098602.1 Genbank gene 3961891 3962775 . - . ID=gene-NDY24_17290;Name=NDY24_17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17290 CP098602.1 Protein Homology CDS 3961891 3962775 . - 0 ID=cds-UUE97569.1;Parent=gene-NDY24_17290;Dbxref=NCBI_GP:UUE97569.1;Name=UUE97569.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013980.2;locus_tag=NDY24_17290;product=M48 family metallopeptidase;protein_id=UUE97569.1;transl_table=11 CP098602.1 Genbank gene 3962805 3966095 . - . ID=gene-NDY24_17295;Name=NDY24_17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17295 CP098602.1 Protein Homology CDS 3962805 3966095 . - 0 ID=cds-UUE97570.1;Parent=gene-NDY24_17295;Dbxref=NCBI_GP:UUE97570.1;Name=UUE97570.1;Ontology_term=GO:0009307,GO:0009035,GO:0019812;gbkey=CDS;go_component=type I site-specific deoxyribonuclease complex|0019812||IEA;go_function=type I site-specific deoxyribonuclease activity|0009035||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038029.1;locus_tag=NDY24_17295;product=HsdR family type I site-specific deoxyribonuclease;protein_id=UUE97570.1;transl_table=11 CP098602.1 Genbank gene 3966092 3967393 . - . ID=gene-NDY24_17300;Name=NDY24_17300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17300 CP098602.1 Protein Homology CDS 3966092 3967393 . - 0 ID=cds-UUE97571.1;Parent=gene-NDY24_17300;Dbxref=NCBI_GP:UUE97571.1;Name=UUE97571.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904390.1;locus_tag=NDY24_17300;product=restriction endonuclease subunit S;protein_id=UUE97571.1;transl_table=11 CP098602.1 Genbank gene 3967359 3967901 . - . ID=gene-NDY24_17305;Name=NDY24_17305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17305 CP098602.1 Protein Homology CDS 3967359 3967901 . - 0 ID=cds-UUE97572.1;Parent=gene-NDY24_17305;Dbxref=NCBI_GP:UUE97572.1;Name=UUE97572.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024706.2;locus_tag=NDY24_17305;product=virulence RhuM family protein;protein_id=UUE97572.1;transl_table=11 CP098602.1 Genbank gene 3968007 3968861 . - . ID=gene-NDY24_17310;Name=NDY24_17310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17310 CP098602.1 Protein Homology CDS 3968007 3968861 . - 0 ID=cds-UUE97573.1;Parent=gene-NDY24_17310;Dbxref=NCBI_GP:UUE97573.1;Name=UUE97573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237405.1;locus_tag=NDY24_17310;product=damage-inducible protein D;protein_id=UUE97573.1;transl_table=11 CP098602.1 Genbank gene 3968854 3970362 . - . ID=gene-NDY24_17315;Name=NDY24_17315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17315 CP098602.1 Protein Homology CDS 3968854 3970362 . - 0 ID=cds-UUE97574.1;Parent=gene-NDY24_17315;Dbxref=NCBI_GP:UUE97574.1;Name=UUE97574.1;Ontology_term=GO:0006306,GO:0009307,GO:0009007,GO:0015666;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA,restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA methylation|0006306||IEA,DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038026.1;locus_tag=NDY24_17315;product=type I restriction-modification system subunit M;protein_id=UUE97574.1;transl_table=11 CP098602.1 Genbank gene 3970380 3970967 . - . ID=gene-NDY24_17320;Name=NDY24_17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17320 CP098602.1 Protein Homology CDS 3970380 3970967 . - 0 ID=cds-UUE97575.1;Parent=gene-NDY24_17320;Dbxref=NCBI_GP:UUE97575.1;Name=UUE97575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452952.1;locus_tag=NDY24_17320;product=restriction endonuclease subunit S;protein_id=UUE97575.1;transl_table=11 CP098602.1 Genbank gene 3971137 3971397 . + . ID=gene-NDY24_17325;Name=NDY24_17325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17325 CP098602.1 Protein Homology CDS 3971137 3971397 . + 0 ID=cds-UUE97576.1;Parent=gene-NDY24_17325;Dbxref=NCBI_GP:UUE97576.1;Name=UUE97576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038024.1;locus_tag=NDY24_17325;product=hypothetical protein;protein_id=UUE97576.1;transl_table=11 CP098602.1 Genbank pseudogene 3971701 3971883 . - . ID=gene-NDY24_17330;Name=NDY24_17330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_17330;pseudo=true CP098602.1 Protein Homology CDS 3971701 3971883 . - 0 ID=cds-NDY24_17330;Parent=gene-NDY24_17330;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612267.1;locus_tag=NDY24_17330;product=transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3972222 3974603 . + . ID=gene-NDY24_17335;Name=NDY24_17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17335 CP098602.1 Protein Homology CDS 3972222 3974603 . + 0 ID=cds-UUE97577.1;Parent=gene-NDY24_17335;Dbxref=NCBI_GP:UUE97577.1;Name=UUE97577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904688.1;locus_tag=NDY24_17335;product=type III secretion system effector protein XopK;protein_id=UUE97577.1;transl_table=11 CP098602.1 Genbank gene 3974665 3974740 . - . ID=gene-NDY24_17340;Name=NDY24_17340;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_17340 CP098602.1 cmsearch ncRNA 3974665 3974740 . - . ID=rna-NDY24_17340;Parent=gene-NDY24_17340;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_17340;product=sX9 sRNA CP098602.1 cmsearch exon 3974665 3974740 . - . ID=exon-NDY24_17340-1;Parent=rna-NDY24_17340;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_17340;product=sX9 sRNA CP098602.1 Genbank gene 3974940 3975185 . + . ID=gene-NDY24_17345;Name=NDY24_17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17345 CP098602.1 GeneMarkS-2+ CDS 3974940 3975185 . + 0 ID=cds-UUE97578.1;Parent=gene-NDY24_17345;Dbxref=NCBI_GP:UUE97578.1;Name=UUE97578.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_17345;product=hypothetical protein;protein_id=UUE97578.1;transl_table=11 CP098602.1 Genbank gene 3975311 3975820 . + . ID=gene-NDY24_17350;Name=NDY24_17350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17350 CP098602.1 GeneMarkS-2+ CDS 3975311 3975820 . + 0 ID=cds-UUE97579.1;Parent=gene-NDY24_17350;Dbxref=NCBI_GP:UUE97579.1;Name=UUE97579.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_17350;product=hypothetical protein;protein_id=UUE97579.1;transl_table=11 CP098602.1 Genbank gene 3976893 3977132 . + . ID=gene-NDY24_17355;Name=NDY24_17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17355 CP098602.1 Protein Homology CDS 3976893 3977132 . + 0 ID=cds-UUE97580.1;Parent=gene-NDY24_17355;Dbxref=NCBI_GP:UUE97580.1;Name=UUE97580.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014901.2;locus_tag=NDY24_17355;product=C48 family peptidase;protein_id=UUE97580.1;transl_table=11 CP098602.1 Genbank gene 3977311 3977562 . + . ID=gene-NDY24_17360;Name=NDY24_17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17360 CP098602.1 GeneMarkS-2+ CDS 3977311 3977562 . + 0 ID=cds-UUE97581.1;Parent=gene-NDY24_17360;Dbxref=NCBI_GP:UUE97581.1;Name=UUE97581.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_17360;product=hypothetical protein;protein_id=UUE97581.1;transl_table=11 CP098602.1 Genbank gene 3977642 3979483 . - . ID=gene-NDY24_17365;Name=NDY24_17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17365 CP098602.1 Protein Homology CDS 3977642 3979483 . - 0 ID=cds-UUE97582.1;Parent=gene-NDY24_17365;Dbxref=NCBI_GP:UUE97582.1;Name=UUE97582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017173652.1;locus_tag=NDY24_17365;product=beta-galactosidase;protein_id=UUE97582.1;transl_table=11 CP098602.1 Genbank pseudogene 3979538 3981882 . - . ID=gene-NDY24_17370;Name=NDY24_17370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_17370;pseudo=true CP098602.1 Protein Homology CDS 3979538 3981882 . - 0 ID=cds-NDY24_17370;Parent=gene-NDY24_17370;Note=frameshifted;Ontology_term=GO:0005975,GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155572.1;locus_tag=NDY24_17370;product=GH92 family glycosyl hydrolase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3982015 3983478 . - . ID=gene-NDY24_17375;Name=NDY24_17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17375 CP098602.1 Protein Homology CDS 3982015 3983478 . - 0 ID=cds-UUE97583.1;Parent=gene-NDY24_17375;Dbxref=NCBI_GP:UUE97583.1;Name=UUE97583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002813906.1;locus_tag=NDY24_17375;product=glycoside hydrolase family 125 protein;protein_id=UUE97583.1;transl_table=11 CP098602.1 Genbank gene 3983682 3985106 . - . ID=gene-NDY24_17380;Name=NDY24_17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17380 CP098602.1 Protein Homology CDS 3983682 3985106 . - 0 ID=cds-UUE97584.1;Parent=gene-NDY24_17380;Dbxref=NCBI_GP:UUE97584.1;Name=UUE97584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482450.1;locus_tag=NDY24_17380;product=6-phospho-beta-glucosidase;protein_id=UUE97584.1;transl_table=11 CP098602.1 Genbank gene 3985103 3986041 . - . ID=gene-NDY24_17385;Name=NDY24_17385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17385 CP098602.1 Protein Homology CDS 3985103 3986041 . - 0 ID=cds-UUE97585.1;Parent=gene-NDY24_17385;Dbxref=NCBI_GP:UUE97585.1;Name=UUE97585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052024.1;locus_tag=NDY24_17385;product=carbohydrate kinase family protein;protein_id=UUE97585.1;transl_table=11 CP098602.1 Genbank gene 3986020 3986988 . - . ID=gene-NDY24_17390;Name=NDY24_17390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17390 CP098602.1 Protein Homology CDS 3986020 3986988 . - 0 ID=cds-UUE97586.1;Parent=gene-NDY24_17390;Dbxref=NCBI_GP:UUE97586.1;Name=UUE97586.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024910.2;locus_tag=NDY24_17390;product=APC family permease;protein_id=UUE97586.1;transl_table=11 CP098602.1 Genbank pseudogene 3987385 3989299 . - . ID=gene-NDY24_17395;Name=NDY24_17395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_17395;pseudo=true CP098602.1 Protein Homology CDS 3987385 3989299 . - 0 ID=cds-NDY24_17395;Parent=gene-NDY24_17395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451438.1;locus_tag=NDY24_17395;product=beta-galactosidase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3989378 3992266 . - . ID=gene-NDY24_17400;Name=NDY24_17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17400 CP098602.1 Protein Homology CDS 3989378 3992266 . - 0 ID=cds-UUF00455.1;Parent=gene-NDY24_17400;Dbxref=NCBI_GP:UUF00455.1;Name=UUF00455.1;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482441.1;locus_tag=NDY24_17400;product=TonB-dependent receptor;protein_id=UUF00455.1;transl_table=11 CP098602.1 Genbank pseudogene 3993006 3995673 . - . ID=gene-NDY24_17405;Name=NDY24_17405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_17405;pseudo=true CP098602.1 Protein Homology CDS 3993006 3995673 . - 0 ID=cds-NDY24_17405;Parent=gene-NDY24_17405;Note=frameshifted;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155574.1;locus_tag=NDY24_17405;product=glycoside hydrolase family 3 C-terminal domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 3995825 3995901 . + . ID=gene-NDY24_17410;Name=NDY24_17410;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_17410 CP098602.1 cmsearch ncRNA 3995825 3995901 . + . ID=rna-NDY24_17410;Parent=gene-NDY24_17410;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_17410;product=sX9 sRNA CP098602.1 cmsearch exon 3995825 3995901 . + . ID=exon-NDY24_17410-1;Parent=rna-NDY24_17410;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_17410;product=sX9 sRNA CP098602.1 Genbank gene 3996052 3998733 . - . ID=gene-NDY24_17415;Name=NDY24_17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17415 CP098602.1 Protein Homology CDS 3996052 3998733 . - 0 ID=cds-UUE97587.1;Parent=gene-NDY24_17415;Dbxref=NCBI_GP:UUE97587.1;Name=UUE97587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504091.1;locus_tag=NDY24_17415;product=glycoside hydrolase family 2 protein;protein_id=UUE97587.1;transl_table=11 CP098602.1 Genbank gene 3998755 4001244 . - . ID=gene-NDY24_17420;Name=NDY24_17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17420 CP098602.1 Protein Homology CDS 3998755 4001244 . - 0 ID=cds-UUE97588.1;Parent=gene-NDY24_17420;Dbxref=NCBI_GP:UUE97588.1;Name=UUE97588.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005919009.1;locus_tag=NDY24_17420;product=family 20 glycosylhydrolase;protein_id=UUE97588.1;transl_table=11 CP098602.1 Genbank pseudogene 4001502 4002571 . - . ID=gene-NDY24_17425;Name=NDY24_17425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_17425;pseudo=true CP098602.1 Protein Homology CDS 4001502 4002571 . - 0 ID=cds-NDY24_17425;Parent=gene-NDY24_17425;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118914.1;locus_tag=NDY24_17425;product=glycosyl hydrolase family 18 protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4002568 4004259 . - . ID=gene-NDY24_17430;Name=NDY24_17430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_17430;pseudo=true CP098602.1 Protein Homology CDS 4002568 4004259 . - 0 ID=cds-NDY24_17430;Parent=gene-NDY24_17430;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161486.1;locus_tag=NDY24_17430;product=alpha-L-fucosidase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4004468 4007156 . - . ID=gene-NDY24_17435;Name=NDY24_17435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_17435;pseudo=true CP098602.1 Protein Homology CDS 4004468 4007156 . - 0 ID=cds-NDY24_17435;Parent=gene-NDY24_17435;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017164668.1;locus_tag=NDY24_17435;product=TonB-dependent receptor;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4007877 4008875 . + . ID=gene-NDY24_17440;Name=NDY24_17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17440 CP098602.1 Protein Homology CDS 4007877 4008875 . + 0 ID=cds-UUF00456.1;Parent=gene-NDY24_17440;Dbxref=NCBI_GP:UUF00456.1;Name=UUF00456.1;Ontology_term=GO:0006096,GO:0004340;gbkey=CDS;go_function=glucokinase activity|0004340||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988601.1;locus_tag=NDY24_17440;product=glucokinase;protein_id=UUF00456.1;transl_table=11 CP098602.1 Genbank gene 4009040 4009774 . - . ID=gene-NDY24_17445;Name=NDY24_17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17445 CP098602.1 Protein Homology CDS 4009040 4009774 . - 0 ID=cds-UUE97589.1;Parent=gene-NDY24_17445;Dbxref=NCBI_GP:UUE97589.1;Name=UUE97589.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005931477.1;locus_tag=NDY24_17445;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=UUE97589.1;transl_table=11 CP098602.1 Genbank gene 4009765 4011183 . - . ID=gene-NDY24_17450;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=NDY24_17450 CP098602.1 Protein Homology CDS 4009765 4011183 . - 0 ID=cds-UUE97590.1;Parent=gene-NDY24_17450;Dbxref=NCBI_GP:UUE97590.1;Name=UUE97590.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851465.1;locus_tag=NDY24_17450;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=UUE97590.1;transl_table=11 CP098602.1 Genbank gene 4011225 4011773 . + . ID=gene-NDY24_17455;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=NDY24_17455 CP098602.1 Protein Homology CDS 4011225 4011773 . + 0 ID=cds-UUE97591.1;Parent=gene-NDY24_17455;Dbxref=NCBI_GP:UUE97591.1;Name=UUE97591.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090754.1;locus_tag=NDY24_17455;product=ADP compounds hydrolase NudE;protein_id=UUE97591.1;transl_table=11 CP098602.1 Genbank gene 4011770 4012570 . + . ID=gene-NDY24_17460;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=NDY24_17460 CP098602.1 Protein Homology CDS 4011770 4012570 . + 0 ID=cds-UUE97592.1;Parent=gene-NDY24_17460;Dbxref=NCBI_GP:UUE97592.1;Name=UUE97592.1;Ontology_term=GO:0006790,GO:0008441;gbkey=CDS;gene=cysQ;go_function=3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038007.1;locus_tag=NDY24_17460;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=UUE97592.1;transl_table=11 CP098602.1 Genbank gene 4012579 4013553 . + . ID=gene-NDY24_17465;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=NDY24_17465 CP098602.1 Protein Homology CDS 4012579 4013553 . + 0 ID=cds-UUE97593.1;Parent=gene-NDY24_17465;Dbxref=NCBI_GP:UUE97593.1;Name=UUE97593.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451452.1;locus_tag=NDY24_17465;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=UUE97593.1;transl_table=11 CP098602.1 Genbank gene 4013550 4013885 . + . ID=gene-NDY24_17470;Name=NDY24_17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17470 CP098602.1 Protein Homology CDS 4013550 4013885 . + 0 ID=cds-UUE97594.1;Parent=gene-NDY24_17470;Dbxref=NCBI_GP:UUE97594.1;Name=UUE97594.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451453.1;locus_tag=NDY24_17470;product=YnfA family protein;protein_id=UUE97594.1;transl_table=11 CP098602.1 Genbank pseudogene 4014083 4015241 . + . ID=gene-NDY24_17475;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=pseudogene;locus_tag=NDY24_17475;pseudo=true CP098602.1 Protein Homology CDS 4014083 4015241 . + 0 ID=cds-NDY24_17475;Parent=gene-NDY24_17475;Note=frameshifted%3B internal stop;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005931494.1;locus_tag=NDY24_17475;product=glycine cleavage system aminomethyltransferase GcvT;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4015333 4015729 . + . ID=gene-NDY24_17480;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=pseudogene;locus_tag=NDY24_17480;pseudo=true CP098602.1 Protein Homology CDS 4015333 4015729 . + 0 ID=cds-NDY24_17480;Parent=gene-NDY24_17480;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0019464,GO:0003824;gbkey=CDS;gene=gcvH;go_function=catalytic activity|0003824||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368686.1;locus_tag=NDY24_17480;product=glycine cleavage system protein GcvH;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4016759 4017226 . + . ID=gene-NDY24_17485;Name=NDY24_17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17485 CP098602.1 GeneMarkS-2+ CDS 4016759 4017226 . + 0 ID=cds-UUE97595.1;Parent=gene-NDY24_17485;Dbxref=NCBI_GP:UUE97595.1;Name=UUE97595.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_17485;product=hypothetical protein;protein_id=UUE97595.1;transl_table=11 CP098602.1 Genbank gene 4017381 4018724 . - . ID=gene-NDY24_17490;Name=NDY24_17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17490 CP098602.1 Protein Homology CDS 4017381 4018724 . - 0 ID=cds-UUF00457.1;Parent=gene-NDY24_17490;Dbxref=NCBI_GP:UUF00457.1;Name=UUF00457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504072.1;locus_tag=NDY24_17490;product=beta-lactamase family protein;protein_id=UUF00457.1;transl_table=11 CP098602.1 Genbank gene 4019094 4020458 . + . ID=gene-NDY24_17495;Name=NDY24_17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17495 CP098602.1 Protein Homology CDS 4019094 4020458 . + 0 ID=cds-UUE97596.1;Parent=gene-NDY24_17495;Dbxref=NCBI_GP:UUE97596.1;Name=UUE97596.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849238.1;locus_tag=NDY24_17495;product=MFS transporter;protein_id=UUE97596.1;transl_table=11 CP098602.1 Genbank gene 4021443 4021796 . + . ID=gene-NDY24_17500;Name=NDY24_17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17500 CP098602.1 Protein Homology CDS 4021443 4021796 . + 0 ID=cds-UUE97597.1;Parent=gene-NDY24_17500;Dbxref=NCBI_GP:UUE97597.1;Name=UUE97597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368701.1;locus_tag=NDY24_17500;product=DUF1304 domain-containing protein;protein_id=UUE97597.1;transl_table=11 CP098602.1 Genbank gene 4022024 4024498 . - . ID=gene-NDY24_17505;Name=NDY24_17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17505 CP098602.1 Protein Homology CDS 4022024 4024498 . - 0 ID=cds-UUE97598.1;Parent=gene-NDY24_17505;Dbxref=NCBI_GP:UUE97598.1;Name=UUE97598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090746.1;locus_tag=NDY24_17505;product=acyl-CoA dehydrogenase;protein_id=UUE97598.1;transl_table=11 CP098602.1 Genbank gene 4024495 4025418 . - . ID=gene-NDY24_17510;Name=NDY24_17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17510 CP098602.1 Protein Homology CDS 4024495 4025418 . - 0 ID=cds-UUE97599.1;Parent=gene-NDY24_17510;Dbxref=NCBI_GP:UUE97599.1;Name=UUE97599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166286.1;locus_tag=NDY24_17510;product=alpha/beta hydrolase;protein_id=UUE97599.1;transl_table=11 CP098602.1 Genbank gene 4025556 4026164 . + . ID=gene-NDY24_17515;Name=NDY24_17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17515 CP098602.1 Protein Homology CDS 4025556 4026164 . + 0 ID=cds-UUE97600.1;Parent=gene-NDY24_17515;Dbxref=NCBI_GP:UUE97600.1;Name=UUE97600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988563.1;locus_tag=NDY24_17515;product=TetR/AcrR family transcriptional regulator;protein_id=UUE97600.1;transl_table=11 CP098602.1 Genbank gene 4026272 4029043 . - . ID=gene-NDY24_17520;Name=NDY24_17520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17520 CP098602.1 Protein Homology CDS 4026272 4029043 . - 0 ID=cds-UUE97601.1;Parent=gene-NDY24_17520;Dbxref=NCBI_GP:UUE97601.1;Name=UUE97601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237424.1;locus_tag=NDY24_17520;product=TonB-dependent receptor;protein_id=UUE97601.1;transl_table=11 CP098602.1 Genbank gene 4029286 4030125 . - . ID=gene-NDY24_17525;Name=NDY24_17525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17525 CP098602.1 Protein Homology CDS 4029286 4030125 . - 0 ID=cds-UUF00458.1;Parent=gene-NDY24_17525;Dbxref=NCBI_GP:UUF00458.1;Name=UUF00458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572079.1;locus_tag=NDY24_17525;product=hypothetical protein;protein_id=UUF00458.1;transl_table=11 CP098602.1 Genbank gene 4030279 4031169 . - . ID=gene-NDY24_17530;Name=NDY24_17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17530 CP098602.1 Protein Homology CDS 4030279 4031169 . - 0 ID=cds-UUE97602.1;Parent=gene-NDY24_17530;Dbxref=NCBI_GP:UUE97602.1;Name=UUE97602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368716.1;locus_tag=NDY24_17530;product=Hsp33 family molecular chaperone HslO;protein_id=UUE97602.1;transl_table=11 CP098602.1 Genbank gene 4031245 4031976 . + . ID=gene-NDY24_17535;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=NDY24_17535 CP098602.1 Protein Homology CDS 4031245 4031976 . + 0 ID=cds-UUE97603.1;Parent=gene-NDY24_17535;Dbxref=NCBI_GP:UUE97603.1;Name=UUE97603.1;Ontology_term=GO:0009252,GO:0009274,GO:0016021;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,integral component of membrane|0016021||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037989.1;locus_tag=NDY24_17535;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=UUE97603.1;transl_table=11 CP098602.1 Genbank gene 4031979 4033025 . + . ID=gene-NDY24_17540;Name=NDY24_17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17540 CP098602.1 Protein Homology CDS 4031979 4033025 . + 0 ID=cds-UUE97604.1;Parent=gene-NDY24_17540;Dbxref=NCBI_GP:UUE97604.1;Name=UUE97604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157863.1;locus_tag=NDY24_17540;product=glycosyltransferase family 2 protein;protein_id=UUE97604.1;transl_table=11 CP098602.1 Genbank gene 4032985 4033413 . + . ID=gene-NDY24_17545;Name=NDY24_17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17545 CP098602.1 Protein Homology CDS 4032985 4033413 . + 0 ID=cds-UUE97605.1;Parent=gene-NDY24_17545;Dbxref=NCBI_GP:UUE97605.1;Name=UUE97605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090742.1;locus_tag=NDY24_17545;product=CBS domain-containing protein;protein_id=UUE97605.1;transl_table=11 CP098602.1 Genbank gene 4033918 4034841 . - . ID=gene-NDY24_17550;Name=NDY24_17550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17550 CP098602.1 Protein Homology CDS 4033918 4034841 . - 0 ID=cds-UUE97606.1;Parent=gene-NDY24_17550;Dbxref=NCBI_GP:UUE97606.1;Name=UUE97606.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012509957.1;locus_tag=NDY24_17550;product=IS110 family transposase;protein_id=UUE97606.1;transl_table=11 CP098602.1 Genbank pseudogene 4035317 4037273 . - . ID=gene-NDY24_17555;Name=NDY24_17555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_17555;pseudo=true CP098602.1 Protein Homology CDS 4035317 4037273 . - 0 ID=cds-NDY24_17555;Parent=gene-NDY24_17555;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157861.1;locus_tag=NDY24_17555;product=AsmA family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4037350 4037994 . - . ID=gene-NDY24_17560;Name=NDY24_17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17560 CP098602.1 Protein Homology CDS 4037350 4037994 . - 0 ID=cds-UUE97607.1;Parent=gene-NDY24_17560;Dbxref=NCBI_GP:UUE97607.1;Name=UUE97607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301897.1;locus_tag=NDY24_17560;product=hemolysin III family protein;protein_id=UUE97607.1;transl_table=11 CP098602.1 Genbank gene 4038070 4039674 . - . ID=gene-NDY24_17565;Name=NDY24_17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17565 CP098602.1 Protein Homology CDS 4038070 4039674 . - 0 ID=cds-UUE97608.1;Parent=gene-NDY24_17565;Dbxref=NCBI_GP:UUE97608.1;Name=UUE97608.1;Ontology_term=GO:0006415,GO:0003924;gbkey=CDS;go_function=GTPase activity|0003924||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157859.1;locus_tag=NDY24_17565;product=peptide chain release factor 3;protein_id=UUE97608.1;transl_table=11 CP098602.1 Genbank gene 4039810 4040721 . - . ID=gene-NDY24_17570;Name=NDY24_17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17570 CP098602.1 Protein Homology CDS 4039810 4040721 . - 0 ID=cds-UUF00459.1;Parent=gene-NDY24_17570;Dbxref=NCBI_GP:UUF00459.1;Name=UUF00459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348199.1;locus_tag=NDY24_17570;product=M23 family metallopeptidase;protein_id=UUF00459.1;transl_table=11 CP098602.1 cmsearch riboswitch 4040851 4040971 . + . ID=id-CP098602.1:4040851..4040971;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP098602.1 Genbank gene 4041043 4042074 . + . ID=gene-NDY24_17575;Name=NDY24_17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17575 CP098602.1 Protein Homology CDS 4041043 4042074 . + 0 ID=cds-UUE97609.1;Parent=gene-NDY24_17575;Dbxref=NCBI_GP:UUE97609.1;Name=UUE97609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348198.1;locus_tag=NDY24_17575;product=homoserine O-succinyltransferase;protein_id=UUE97609.1;transl_table=11 CP098602.1 Genbank gene 4042071 4043288 . + . ID=gene-NDY24_17580;Name=NDY24_17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17580 CP098602.1 Protein Homology CDS 4042071 4043288 . + 0 ID=cds-UUE97610.1;Parent=gene-NDY24_17580;Dbxref=NCBI_GP:UUE97610.1;Name=UUE97610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157856.1;locus_tag=NDY24_17580;product=O-succinylhomoserine (thiol)-lyase;protein_id=UUE97610.1;transl_table=11 CP098602.1 Genbank gene 4043285 4044373 . + . ID=gene-NDY24_17585;Name=NDY24_17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17585 CP098602.1 Protein Homology CDS 4043285 4044373 . + 0 ID=cds-UUE97611.1;Parent=gene-NDY24_17585;Dbxref=NCBI_GP:UUE97611.1;Name=UUE97611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967946.1;locus_tag=NDY24_17585;product=homoserine dehydrogenase;protein_id=UUE97611.1;transl_table=11 CP098602.1 Genbank gene 4044571 4045566 . - . ID=gene-NDY24_17590;Name=NDY24_17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17590 CP098602.1 Protein Homology CDS 4044571 4045566 . - 0 ID=cds-UUE97612.1;Parent=gene-NDY24_17590;Dbxref=NCBI_GP:UUE97612.1;Name=UUE97612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508519.1;locus_tag=NDY24_17590;product=alpha/beta hydrolase;protein_id=UUE97612.1;transl_table=11 CP098602.1 Genbank gene 4045837 4047219 . - . ID=gene-NDY24_17595;Name=NDY24_17595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17595 CP098602.1 Protein Homology CDS 4045837 4047219 . - 0 ID=cds-UUF00460.1;Parent=gene-NDY24_17595;Dbxref=NCBI_GP:UUF00460.1;Name=UUF00460.1;Ontology_term=GO:0009063,GO:0003941,GO:0051539;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=cellular amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014161485.1;locus_tag=NDY24_17595;product=L-serine ammonia-lyase;protein_id=UUF00460.1;transl_table=11 CP098602.1 Genbank gene 4047307 4047540 . + . ID=gene-NDY24_17600;Name=NDY24_17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17600 CP098602.1 Protein Homology CDS 4047307 4047540 . + 0 ID=cds-UUE97613.1;Parent=gene-NDY24_17600;Dbxref=NCBI_GP:UUE97613.1;Name=UUE97613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449619.1;locus_tag=NDY24_17600;product=glutaredoxin family protein;protein_id=UUE97613.1;transl_table=11 CP098602.1 Genbank gene 4048050 4048634 . - . ID=gene-NDY24_17605;Name=NDY24_17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17605 CP098602.1 Protein Homology CDS 4048050 4048634 . - 0 ID=cds-UUF00461.1;Parent=gene-NDY24_17605;Dbxref=NCBI_GP:UUF00461.1;Name=UUF00461.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504048.1;locus_tag=NDY24_17605;product=cold shock domain-containing protein;protein_id=UUF00461.1;transl_table=11 CP098602.1 Genbank gene 4048767 4049336 . - . ID=gene-NDY24_17610;Name=NDY24_17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17610 CP098602.1 Protein Homology CDS 4048767 4049336 . - 0 ID=cds-UUE97614.1;Parent=gene-NDY24_17610;Dbxref=NCBI_GP:UUE97614.1;Name=UUE97614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504047.1;locus_tag=NDY24_17610;product=YceI family protein;protein_id=UUE97614.1;transl_table=11 CP098602.1 Genbank gene 4049347 4049910 . - . ID=gene-NDY24_17615;Name=NDY24_17615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17615 CP098602.1 Protein Homology CDS 4049347 4049910 . - 0 ID=cds-UUE97615.1;Parent=gene-NDY24_17615;Dbxref=NCBI_GP:UUE97615.1;Name=UUE97615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017907780.1;locus_tag=NDY24_17615;product=cytochrome b;protein_id=UUE97615.1;transl_table=11 CP098602.1 Genbank gene 4049913 4050569 . - . ID=gene-NDY24_17620;Name=NDY24_17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17620 CP098602.1 Protein Homology CDS 4049913 4050569 . - 0 ID=cds-UUE97616.1;Parent=gene-NDY24_17620;Dbxref=NCBI_GP:UUE97616.1;Name=UUE97616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904746.1;locus_tag=NDY24_17620;product=YceI family protein;protein_id=UUE97616.1;transl_table=11 CP098602.1 Genbank gene 4050665 4054234 . + . ID=gene-NDY24_17625;Name=NDY24_17625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17625 CP098602.1 Protein Homology CDS 4050665 4054234 . + 0 ID=cds-UUE97617.1;Parent=gene-NDY24_17625;Dbxref=NCBI_GP:UUE97617.1;Name=UUE97617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450663.1;locus_tag=NDY24_17625;product=ATP-binding protein;protein_id=UUE97617.1;transl_table=11 CP098602.1 Genbank pseudogene 4054320 4057822 . + . ID=gene-NDY24_17630;Name=NDY24_17630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_17630;pseudo=true CP098602.1 Protein Homology CDS 4054320 4057822 . + 0 ID=cds-NDY24_17630;Parent=gene-NDY24_17630;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157847.1;locus_tag=NDY24_17630;product=ATP-binding protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4057998 4061534 . + . ID=gene-NDY24_17635;Name=NDY24_17635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_17635;pseudo=true CP098602.1 Protein Homology CDS 4057998 4061534 . + 0 ID=cds-NDY24_17635;Parent=gene-NDY24_17635;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504041.1;locus_tag=NDY24_17635;product=ATP-binding protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4061610 4063031 . - . ID=gene-NDY24_17640;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=NDY24_17640 CP098602.1 Protein Homology CDS 4061610 4063031 . - 0 ID=cds-UUE97618.1;Parent=gene-NDY24_17640;Dbxref=NCBI_GP:UUE97618.1;Name=UUE97618.1;Ontology_term=GO:0055085,GO:0022857,GO:0016021;gbkey=CDS;gene=mdtD;go_component=integral component of membrane|0016021||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157844.1;locus_tag=NDY24_17640;product=multidrug transporter subunit MdtD;protein_id=UUE97618.1;transl_table=11 CP098602.1 Genbank gene 4063596 4064660 . - . ID=gene-NDY24_17645;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=NDY24_17645 CP098602.1 Protein Homology CDS 4063596 4064660 . - 0 ID=cds-UUE97619.1;Parent=gene-NDY24_17645;Dbxref=NCBI_GP:UUE97619.1;Name=UUE97619.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407863.1;locus_tag=NDY24_17645;product=uroporphyrinogen decarboxylase;protein_id=UUE97619.1;transl_table=11 CP098602.1 Genbank gene 4064670 4064921 . - . ID=gene-NDY24_17650;Name=NDY24_17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17650 CP098602.1 Protein Homology CDS 4064670 4064921 . - 0 ID=cds-UUE97620.1;Parent=gene-NDY24_17650;Dbxref=NCBI_GP:UUE97620.1;Name=UUE97620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158980.1;locus_tag=NDY24_17650;product=WGR domain-containing protein;protein_id=UUE97620.1;transl_table=11 CP098602.1 Genbank gene 4065101 4066213 . - . ID=gene-NDY24_17655;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=NDY24_17655 CP098602.1 Protein Homology CDS 4065101 4066213 . - 0 ID=cds-UUE97621.1;Parent=gene-NDY24_17655;Dbxref=NCBI_GP:UUE97621.1;Name=UUE97621.1;Ontology_term=GO:0009423,GO:0003856;gbkey=CDS;gene=aroB;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002807954.1;locus_tag=NDY24_17655;product=3-dehydroquinate synthase;protein_id=UUE97621.1;transl_table=11 CP098602.1 Genbank gene 4066210 4066752 . - . ID=gene-NDY24_17660;Name=NDY24_17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17660 CP098602.1 Protein Homology CDS 4066210 4066752 . - 0 ID=cds-UUE97622.1;Parent=gene-NDY24_17660;Dbxref=NCBI_GP:UUE97622.1;Name=UUE97622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917545.1;locus_tag=NDY24_17660;product=shikimate kinase;protein_id=UUE97622.1;transl_table=11 CP098602.1 Genbank gene 4066959 4067558 . + . ID=gene-NDY24_17665;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=NDY24_17665 CP098602.1 Protein Homology CDS 4066959 4067558 . + 0 ID=cds-UUE97623.1;Parent=gene-NDY24_17665;Dbxref=NCBI_GP:UUE97623.1;Name=UUE97623.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine-phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381128.1;locus_tag=NDY24_17665;product=pyridoxamine 5'-phosphate oxidase;protein_id=UUE97623.1;transl_table=11 CP098602.1 Genbank gene 4067555 4068025 . + . ID=gene-NDY24_17670;Name=NDY24_17670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17670 CP098602.1 Protein Homology CDS 4067555 4068025 . + 0 ID=cds-UUE97624.1;Parent=gene-NDY24_17670;Dbxref=NCBI_GP:UUE97624.1;Name=UUE97624.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904372.1;locus_tag=NDY24_17670;product=GNAT family N-acetyltransferase;protein_id=UUE97624.1;transl_table=11 CP098602.1 Genbank gene 4068152 4068568 . + . ID=gene-NDY24_17675;Name=NDY24_17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17675 CP098602.1 Protein Homology CDS 4068152 4068568 . + 0 ID=cds-UUE97625.1;Parent=gene-NDY24_17675;Dbxref=NCBI_GP:UUE97625.1;Name=UUE97625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489526.1;locus_tag=NDY24_17675;product=YjfI family protein;protein_id=UUE97625.1;transl_table=11 CP098602.1 Genbank gene 4068587 4069351 . + . ID=gene-NDY24_17680;Name=NDY24_17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17680 CP098602.1 Protein Homology CDS 4068587 4069351 . + 0 ID=cds-UUF00462.1;Parent=gene-NDY24_17680;Dbxref=NCBI_GP:UUF00462.1;Name=UUF00462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302374.1;locus_tag=NDY24_17680;product=PspA/IM30 family protein;protein_id=UUF00462.1;transl_table=11 CP098602.1 Genbank pseudogene 4069467 4070460 . + . ID=gene-NDY24_17685;Name=NDY24_17685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_17685;pseudo=true CP098602.1 Protein Homology CDS 4069467 4070460 . + 0 ID=cds-NDY24_17685;Parent=gene-NDY24_17685;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449072.1;locus_tag=NDY24_17685;product=ion channel;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4070463 4070909 . + . ID=gene-NDY24_17690;Name=NDY24_17690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_17690;pseudo=true CP098602.1 Protein Homology CDS 4070463 4070909 . + 0 ID=cds-NDY24_17690;Parent=gene-NDY24_17690;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022144.2;locus_tag=NDY24_17690;product=YjfK family protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4071177 4071580 . + . ID=gene-NDY24_17695;Name=NDY24_17695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_17695;pseudo=true CP098602.1 Protein Homology CDS 4071177 4071580 . + 0 ID=cds-NDY24_17695;Parent=gene-NDY24_17695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002807970.1;locus_tag=NDY24_17695;product=DUF350 domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4071592 4072167 . + . ID=gene-NDY24_17700;Name=NDY24_17700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_17700;pseudo=true CP098602.1 Protein Homology CDS 4071592 4072167 . + 0 ID=cds-NDY24_17700;Parent=gene-NDY24_17700;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965639.1;locus_tag=NDY24_17700;product=DUF1190 domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4072493 4073350 . + . ID=gene-NDY24_17705;Name=NDY24_17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17705 CP098602.1 Protein Homology CDS 4072493 4073350 . + 0 ID=cds-UUE97626.1;Parent=gene-NDY24_17705;Dbxref=NCBI_GP:UUE97626.1;Name=UUE97626.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015683.2;locus_tag=NDY24_17705;product=glutathionylspermidine synthase family protein;protein_id=UUE97626.1;transl_table=11 CP098602.1 Genbank pseudogene 4073733 4075114 . - . ID=gene-NDY24_17710;Name=NDY24_17710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_17710;pseudo=true CP098602.1 Protein Homology CDS 4073733 4075114 . - 0 ID=cds-NDY24_17710;Parent=gene-NDY24_17710;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162332.1;locus_tag=NDY24_17710;product=MFS transporter;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4075227 4075673 . + . ID=gene-NDY24_17715;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=NDY24_17715 CP098602.1 Protein Homology CDS 4075227 4075673 . + 0 ID=cds-UUF00463.1;Parent=gene-NDY24_17715;Dbxref=NCBI_GP:UUF00463.1;Name=UUF00463.1;Ontology_term=GO:0006355,GO:0006979,GO:0003677,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965644.1;locus_tag=NDY24_17715;product=redox-sensitive transcriptional activator SoxR;protein_id=UUF00463.1;transl_table=11 CP098602.1 Genbank gene 4076237 4078273 . + . ID=gene-NDY24_17720;Name=NDY24_17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17720 CP098602.1 Protein Homology CDS 4076237 4078273 . + 0 ID=cds-UUE97627.1;Parent=gene-NDY24_17720;Dbxref=NCBI_GP:UUE97627.1;Name=UUE97627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851403.1;locus_tag=NDY24_17720;product=M1 family metallopeptidase;protein_id=UUE97627.1;transl_table=11 CP098602.1 Genbank gene 4078270 4078725 . - . ID=gene-NDY24_17725;Name=NDY24_17725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17725 CP098602.1 GeneMarkS-2+ CDS 4078270 4078725 . - 0 ID=cds-UUE97628.1;Parent=gene-NDY24_17725;Dbxref=NCBI_GP:UUE97628.1;Name=UUE97628.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_17725;product=hypothetical protein;protein_id=UUE97628.1;transl_table=11 CP098602.1 Genbank gene 4079069 4082227 . + . ID=gene-NDY24_17730;Name=NDY24_17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17730 CP098602.1 Protein Homology CDS 4079069 4082227 . + 0 ID=cds-UUE97629.1;Parent=gene-NDY24_17730;Dbxref=NCBI_GP:UUE97629.1;Name=UUE97629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489548.1;locus_tag=NDY24_17730;product=TonB-dependent receptor;protein_id=UUE97629.1;transl_table=11 CP098602.1 Genbank gene 4082679 4083440 . + . ID=gene-NDY24_17735;Name=NDY24_17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17735 CP098602.1 Protein Homology CDS 4082679 4083440 . + 0 ID=cds-UUE97630.1;Parent=gene-NDY24_17735;Dbxref=NCBI_GP:UUE97630.1;Name=UUE97630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051964.1;locus_tag=NDY24_17735;product=SapC family protein;protein_id=UUE97630.1;transl_table=11 CP098602.1 Genbank pseudogene 4083466 4084493 . + . ID=gene-NDY24_17740;Name=NDY24_17740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_17740;pseudo=true CP098602.1 Protein Homology CDS 4083466 4084493 . + 0 ID=cds-NDY24_17740;Parent=gene-NDY24_17740;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995069.1;locus_tag=NDY24_17740;product=cupin-like domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4084534 4086027 . + . ID=gene-NDY24_17745;Name=NDY24_17745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_17745;pseudo=true CP098602.1 Protein Homology CDS 4084534 4086027 . + 0 ID=cds-NDY24_17745;Parent=gene-NDY24_17745;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017173993.1;locus_tag=NDY24_17745;product=tryptophan 7-halogenase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4086068 4087075 . - . ID=gene-NDY24_17750;Name=NDY24_17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17750 CP098602.1 Protein Homology CDS 4086068 4087075 . - 0 ID=cds-UUE97631.1;Parent=gene-NDY24_17750;Dbxref=NCBI_GP:UUE97631.1;Name=UUE97631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116322.1;locus_tag=NDY24_17750;product=MBL fold metallo-hydrolase;protein_id=UUE97631.1;transl_table=11 CP098602.1 Genbank gene 4087164 4087568 . - . ID=gene-NDY24_17755;Name=NDY24_17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17755 CP098602.1 Protein Homology CDS 4087164 4087568 . - 0 ID=cds-UUE97632.1;Parent=gene-NDY24_17755;Dbxref=NCBI_GP:UUE97632.1;Name=UUE97632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449229.1;locus_tag=NDY24_17755;product=hypothetical protein;protein_id=UUE97632.1;transl_table=11 CP098602.1 Genbank gene 4087696 4089093 . - . ID=gene-NDY24_17760;Name=NDY24_17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17760 CP098602.1 Protein Homology CDS 4087696 4089093 . - 0 ID=cds-UUE97633.1;Parent=gene-NDY24_17760;Dbxref=NCBI_GP:UUE97633.1;Name=UUE97633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002807981.1;locus_tag=NDY24_17760;product=trypsin-like peptidase domain-containing protein;protein_id=UUE97633.1;transl_table=11 CP098602.1 Genbank pseudogene 4089556 4090942 . - . ID=gene-NDY24_17765;Name=NDY24_17765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_17765;pseudo=true CP098602.1 Protein Homology CDS 4089556 4090942 . - 0 ID=cds-NDY24_17765;Parent=gene-NDY24_17765;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157822.1;locus_tag=NDY24_17765;product=APC family permease;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4091137 4091901 . + . ID=gene-NDY24_17770;Name=NDY24_17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17770 CP098602.1 Protein Homology CDS 4091137 4091901 . + 0 ID=cds-UUE97634.1;Parent=gene-NDY24_17770;Dbxref=NCBI_GP:UUE97634.1;Name=UUE97634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964311.1;locus_tag=NDY24_17770;product=LuxR family transcriptional regulator;protein_id=UUE97634.1;transl_table=11 CP098602.1 Genbank gene 4092087 4093028 . + . ID=gene-NDY24_17775;Name=NDY24_17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17775 CP098602.1 Protein Homology CDS 4092087 4093028 . + 0 ID=cds-UUE97635.1;Parent=gene-NDY24_17775;Dbxref=NCBI_GP:UUE97635.1;Name=UUE97635.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437774.1;locus_tag=NDY24_17775;product=proline iminopeptidase-family hydrolase;protein_id=UUE97635.1;transl_table=11 CP098602.1 Genbank gene 4093635 4094696 . + . ID=gene-NDY24_17780;Name=NDY24_17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17780 CP098602.1 Protein Homology CDS 4093635 4094696 . + 0 ID=cds-UUE97636.1;Parent=gene-NDY24_17780;Dbxref=NCBI_GP:UUE97636.1;Name=UUE97636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904208.1;locus_tag=NDY24_17780;product=pectate lyase;protein_id=UUE97636.1;transl_table=11 CP098602.1 Genbank gene 4094974 4096362 . + . ID=gene-NDY24_17785;Name=NDY24_17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17785 CP098602.1 Protein Homology CDS 4094974 4096362 . + 0 ID=cds-UUE97637.1;Parent=gene-NDY24_17785;Dbxref=NCBI_GP:UUE97637.1;Name=UUE97637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508483.1;locus_tag=NDY24_17785;product=amino acid permease;protein_id=UUE97637.1;transl_table=11 CP098602.1 Genbank pseudogene 4096698 4097928 . + . ID=gene-NDY24_17790;Name=NDY24_17790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_17790;pseudo=true CP098602.1 Protein Homology CDS 4096698 4097928 . + 0 ID=cds-NDY24_17790;Parent=gene-NDY24_17790;Note=frameshifted;Ontology_term=GO:0006508,GO:0070573;gbkey=CDS;go_function=metallodipeptidase activity|0070573||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158987.1;locus_tag=NDY24_17790;product=membrane dipeptidase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4098370 4099767 . + . ID=gene-NDY24_17795;Name=NDY24_17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17795 CP098602.1 Protein Homology CDS 4098370 4099767 . + 0 ID=cds-UUE97638.1;Parent=gene-NDY24_17795;Dbxref=NCBI_GP:UUE97638.1;Name=UUE97638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237439.1;locus_tag=NDY24_17795;product=cytochrome ubiquinol oxidase subunit I;protein_id=UUE97638.1;transl_table=11 CP098602.1 Genbank gene 4099767 4100783 . + . ID=gene-NDY24_17800;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=NDY24_17800 CP098602.1 Protein Homology CDS 4099767 4100783 . + 0 ID=cds-UUE97639.1;Parent=gene-NDY24_17800;Dbxref=NCBI_GP:UUE97639.1;Name=UUE97639.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051953.1;locus_tag=NDY24_17800;product=cytochrome d ubiquinol oxidase subunit II;protein_id=UUE97639.1;transl_table=11 CP098602.1 Genbank gene 4100821 4101681 . - . ID=gene-NDY24_17805;Name=NDY24_17805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17805 CP098602.1 Protein Homology CDS 4100821 4101681 . - 0 ID=cds-UUE97640.1;Parent=gene-NDY24_17805;Dbxref=NCBI_GP:UUE97640.1;Name=UUE97640.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451263.1;locus_tag=NDY24_17805;product=prolyl oligopeptidase family serine peptidase;protein_id=UUE97640.1;transl_table=11 CP098602.1 Genbank gene 4101736 4103097 . - . ID=gene-NDY24_17810;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=NDY24_17810 CP098602.1 Protein Homology CDS 4101736 4103097 . - 0 ID=cds-UUE97641.1;Parent=gene-NDY24_17810;Dbxref=NCBI_GP:UUE97641.1;Name=UUE97641.1;Ontology_term=GO:0015693,GO:0015095;gbkey=CDS;gene=mgtE;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502484.1;locus_tag=NDY24_17810;product=magnesium transporter;protein_id=UUE97641.1;transl_table=11 CP098602.1 Genbank gene 4103393 4105123 . - . ID=gene-NDY24_17815;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=NDY24_17815 CP098602.1 Protein Homology CDS 4103393 4105123 . - 0 ID=cds-UUE97642.1;Parent=gene-NDY24_17815;Dbxref=NCBI_GP:UUE97642.1;Name=UUE97642.1;Ontology_term=GO:0006808,GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=regulation of nitrogen utilization|0006808||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154796.1;locus_tag=NDY24_17815;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=UUE97642.1;transl_table=11 CP098602.1 Genbank gene 4105182 4105451 . - . ID=gene-NDY24_17820;Name=NDY24_17820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17820 CP098602.1 Protein Homology CDS 4105182 4105451 . - 0 ID=cds-UUE97643.1;Parent=gene-NDY24_17820;Dbxref=NCBI_GP:UUE97643.1;Name=UUE97643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237443.1;locus_tag=NDY24_17820;product=HPr family phosphocarrier protein;protein_id=UUE97643.1;transl_table=11 CP098602.1 Genbank gene 4105444 4105836 . - . ID=gene-NDY24_17825;Name=NDY24_17825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17825 CP098602.1 Protein Homology CDS 4105444 4105836 . - 0 ID=cds-UUE97644.1;Parent=gene-NDY24_17825;Dbxref=NCBI_GP:UUE97644.1;Name=UUE97644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154797.1;locus_tag=NDY24_17825;product=PTS fructose IIA subunit family protein;protein_id=UUE97644.1;transl_table=11 CP098602.1 Genbank gene 4106087 4106959 . - . ID=gene-NDY24_17830;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=NDY24_17830 CP098602.1 Protein Homology CDS 4106087 4106959 . - 0 ID=cds-UUE97645.1;Parent=gene-NDY24_17830;Dbxref=NCBI_GP:UUE97645.1;Name=UUE97645.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993216.1;locus_tag=NDY24_17830;product=RNase adapter RapZ;protein_id=UUE97645.1;transl_table=11 CP098602.1 Genbank gene 4106956 4107906 . - . ID=gene-NDY24_17835;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=NDY24_17835 CP098602.1 Protein Homology CDS 4106956 4107906 . - 0 ID=cds-UUE97646.1;Parent=gene-NDY24_17835;Dbxref=NCBI_GP:UUE97646.1;Name=UUE97646.1;Ontology_term=GO:0009401,GO:0004674,GO:0016791;gbkey=CDS;gene=hprK;go_function=protein serine/threonine kinase activity|0004674||IEA,phosphatase activity|0016791||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004425835.1;locus_tag=NDY24_17835;product=HPr(Ser) kinase/phosphatase;protein_id=UUE97646.1;transl_table=11 CP098602.1 Genbank gene 4107903 4108361 . - . ID=gene-NDY24_17840;Name=NDY24_17840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17840 CP098602.1 Protein Homology CDS 4107903 4108361 . - 0 ID=cds-UUE97647.1;Parent=gene-NDY24_17840;Dbxref=NCBI_GP:UUE97647.1;Name=UUE97647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016944116.1;locus_tag=NDY24_17840;product=PTS sugar transporter subunit IIA;protein_id=UUE97647.1;transl_table=11 CP098602.1 Genbank gene 4108383 4108700 . - . ID=gene-NDY24_17845;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=NDY24_17845 CP098602.1 Protein Homology CDS 4108383 4108700 . - 0 ID=cds-UUE97648.1;Parent=gene-NDY24_17845;Dbxref=NCBI_GP:UUE97648.1;Name=UUE97648.1;Ontology_term=GO:0009386,GO:0045182,GO:0005840,GO:0022626;gbkey=CDS;gene=raiA;go_component=ribosome|0005840||IEA,cytosolic ribosome|0022626||IEA;go_function=translation regulator activity|0045182||IEA;go_process=translational attenuation|0009386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913379.1;locus_tag=NDY24_17845;product=ribosome-associated translation inhibitor RaiA;protein_id=UUE97648.1;transl_table=11 CP098602.1 Genbank pseudogene 4108788 4110186 . - . ID=gene-NDY24_17850;Name=NDY24_17850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_17850;pseudo=true CP098602.1 Protein Homology CDS 4108788 4110186 . - 0 ID=cds-NDY24_17850;Parent=gene-NDY24_17850;Note=frameshifted;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription%2C initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161722.1;locus_tag=NDY24_17850;product=RNA polymerase factor sigma-54;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4110269 4110988 . - . ID=gene-NDY24_17855;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=NDY24_17855 CP098602.1 Protein Homology CDS 4110269 4110988 . - 0 ID=cds-UUE97649.1;Parent=gene-NDY24_17855;Dbxref=NCBI_GP:UUE97649.1;Name=UUE97649.1;Ontology_term=GO:0015920,GO:0015221,GO:0042626,GO:0009898,GO:0043190;gbkey=CDS;gene=lptB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913374.1;locus_tag=NDY24_17855;product=LPS export ABC transporter ATP-binding protein;protein_id=UUE97649.1;transl_table=11 CP098602.1 Genbank gene 4110988 4111548 . - . ID=gene-NDY24_17860;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=NDY24_17860 CP098602.1 Protein Homology CDS 4110988 4111548 . - 0 ID=cds-UUE97650.1;Parent=gene-NDY24_17860;Dbxref=NCBI_GP:UUE97650.1;Name=UUE97650.1;Ontology_term=GO:0015920,GO:0001530,GO:0030288,GO:0043190;gbkey=CDS;gene=lptA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide binding|0001530||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157712.1;locus_tag=NDY24_17860;product=lipopolysaccharide transport periplasmic protein LptA;protein_id=UUE97650.1;transl_table=11 CP098602.1 Genbank gene 4111526 4112101 . - . ID=gene-NDY24_17865;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=NDY24_17865 CP098602.1 Protein Homology CDS 4111526 4112101 . - 0 ID=cds-UUE97651.1;Parent=gene-NDY24_17865;Dbxref=NCBI_GP:UUE97651.1;Name=UUE97651.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptC;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301638.1;locus_tag=NDY24_17865;product=LPS export ABC transporter periplasmic protein LptC;protein_id=UUE97651.1;transl_table=11 CP098602.1 Genbank gene 4112098 4112646 . - . ID=gene-NDY24_17870;Name=NDY24_17870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17870 CP098602.1 Protein Homology CDS 4112098 4112646 . - 0 ID=cds-UUE97652.1;Parent=gene-NDY24_17870;Dbxref=NCBI_GP:UUE97652.1;Name=UUE97652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407889.1;locus_tag=NDY24_17870;product=HAD hydrolase family protein;protein_id=UUE97652.1;transl_table=11 CP098602.1 Genbank gene 4112695 4113696 . - . ID=gene-NDY24_17875;Name=NDY24_17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17875 CP098602.1 Protein Homology CDS 4112695 4113696 . - 0 ID=cds-UUE97653.1;Parent=gene-NDY24_17875;Dbxref=NCBI_GP:UUE97653.1;Name=UUE97653.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993233.1;locus_tag=NDY24_17875;product=KpsF/GutQ family sugar-phosphate isomerase;protein_id=UUE97653.1;transl_table=11 CP098602.1 Genbank gene 4113750 4113977 . + . ID=gene-NDY24_17880;Name=NDY24_17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17880 CP098602.1 Protein Homology CDS 4113750 4113977 . + 0 ID=cds-UUE97654.1;Parent=gene-NDY24_17880;Dbxref=NCBI_GP:UUE97654.1;Name=UUE97654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016905061.1;locus_tag=NDY24_17880;product=BolA/IbaG family iron-sulfur metabolism protein;protein_id=UUE97654.1;transl_table=11 CP098602.1 Genbank gene 4114096 4115370 . + . ID=gene-NDY24_17885;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=NDY24_17885 CP098602.1 Protein Homology CDS 4114096 4115370 . + 0 ID=cds-UUE97655.1;Parent=gene-NDY24_17885;Dbxref=NCBI_GP:UUE97655.1;Name=UUE97655.1;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437778.1;locus_tag=NDY24_17885;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=UUE97655.1;transl_table=11 CP098602.1 Genbank gene 4115367 4115690 . + . ID=gene-NDY24_17890;Name=NDY24_17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17890 CP098602.1 Protein Homology CDS 4115367 4115690 . + 0 ID=cds-UUE97656.1;Parent=gene-NDY24_17890;Dbxref=NCBI_GP:UUE97656.1;Name=UUE97656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348142.1;locus_tag=NDY24_17890;product=EF-hand domain-containing protein;protein_id=UUE97656.1;transl_table=11 CP098602.1 Genbank pseudogene 4116256 4116940 . - . ID=gene-NDY24_17895;Name=NDY24_17895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_17895;pseudo=true CP098602.1 Protein Homology CDS 4116256 4116940 . - 0 ID=cds-NDY24_17895;Parent=gene-NDY24_17895;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017168434.1;locus_tag=NDY24_17895;product=DUF3108 domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4116944 4117781 . - . ID=gene-NDY24_17900;Name=NDY24_17900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_17900;pseudo=true CP098602.1 Protein Homology CDS 4116944 4117781 . - 0 ID=cds-NDY24_17900;Parent=gene-NDY24_17900;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158355.1;locus_tag=NDY24_17900;product=DUF3108 domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4117849 4118520 . - . ID=gene-NDY24_17905;Name=purN;gbkey=Gene;gene=purN;gene_biotype=pseudogene;locus_tag=NDY24_17905;pseudo=true CP098602.1 Protein Homology CDS 4117849 4118520 . - 0 ID=cds-NDY24_17905;Parent=gene-NDY24_17905;Note=frameshifted;Ontology_term=GO:0009152,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487817.1;locus_tag=NDY24_17905;product=phosphoribosylglycinamide formyltransferase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4118507 4119124 . - . ID=gene-NDY24_17910;Name=NDY24_17910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17910 CP098602.1 Protein Homology CDS 4118507 4119124 . - 0 ID=cds-UUE97657.1;Parent=gene-NDY24_17910;Dbxref=NCBI_GP:UUE97657.1;Name=UUE97657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157703.1;locus_tag=NDY24_17910;product=DUF2238 domain-containing protein;protein_id=UUE97657.1;transl_table=11 CP098602.1 Genbank gene 4119138 4120271 . - . ID=gene-NDY24_17915;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=NDY24_17915 CP098602.1 Protein Homology CDS 4119138 4120271 . - 0 ID=cds-UUE97658.1;Parent=gene-NDY24_17915;Dbxref=NCBI_GP:UUE97658.1;Name=UUE97658.1;Ontology_term=GO:0006189,GO:0009152,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850074.1;locus_tag=NDY24_17915;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=UUE97658.1;transl_table=11 CP098602.1 Genbank gene 4120294 4121406 . + . ID=gene-NDY24_17920;Name=NDY24_17920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17920 CP098602.1 Protein Homology CDS 4120294 4121406 . + 0 ID=cds-UUE97659.1;Parent=gene-NDY24_17920;Dbxref=NCBI_GP:UUE97659.1;Name=UUE97659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007970596.1;locus_tag=NDY24_17920;product=DUF2066 domain-containing protein;protein_id=UUE97659.1;transl_table=11 CP098602.1 Genbank pseudogene 4121403 4122573 . + . ID=gene-NDY24_17925;Name=NDY24_17925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_17925;pseudo=true CP098602.1 Protein Homology CDS 4121403 4122573 . + 0 ID=cds-NDY24_17925;Parent=gene-NDY24_17925;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157699.1;locus_tag=NDY24_17925;product=AI-2E family transporter;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4122570 4123271 . + . ID=gene-NDY24_17930;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=NDY24_17930 CP098602.1 Protein Homology CDS 4122570 4123271 . + 0 ID=cds-UUE97660.1;Parent=gene-NDY24_17930;Dbxref=NCBI_GP:UUE97660.1;Name=UUE97660.1;Ontology_term=GO:0032297,GO:0016818;gbkey=CDS;gene=hda;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369247.1;locus_tag=NDY24_17930;product=DnaA regulatory inactivator Hda;protein_id=UUE97660.1;transl_table=11 CP098602.1 Genbank pseudogene 4123585 4123775 . + . ID=gene-NDY24_17935;Name=NDY24_17935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_17935;pseudo=true CP098602.1 Protein Homology CDS 4123585 4123775 . + 0 ID=cds-NDY24_17935;Parent=gene-NDY24_17935;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158623.1;locus_tag=NDY24_17935;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4123772 4124535 . - . ID=gene-NDY24_17940;Name=NDY24_17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17940 CP098602.1 Protein Homology CDS 4124220 4124535 . - 0 ID=cds-UUE97661.1;Parent=gene-NDY24_17940;Dbxref=NCBI_GP:UUE97661.1;Name=UUE97661.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=NDY24_17940;product=IS5 family transposase;protein_id=UUE97661.1;transl_table=11 CP098602.1 Protein Homology CDS 4123772 4124220 . - 2 ID=cds-UUE97661.1;Parent=gene-NDY24_17940;Dbxref=NCBI_GP:UUE97661.1;Name=UUE97661.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=NDY24_17940;product=IS5 family transposase;protein_id=UUE97661.1;transl_table=11 CP098602.1 Genbank gene 4124578 4125063 . - . ID=gene-NDY24_17945;Name=NDY24_17945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17945 CP098602.1 Protein Homology CDS 4124578 4125063 . - 0 ID=cds-UUE97662.1;Parent=gene-NDY24_17945;Dbxref=NCBI_GP:UUE97662.1;Name=UUE97662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155733.1;locus_tag=NDY24_17945;product=DUF456 domain-containing protein;protein_id=UUE97662.1;transl_table=11 CP098602.1 Genbank gene 4125291 4125506 . + . ID=gene-NDY24_17950;Name=NDY24_17950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17950 CP098602.1 Protein Homology CDS 4125291 4125506 . + 0 ID=cds-UUE97663.1;Parent=gene-NDY24_17950;Dbxref=NCBI_GP:UUE97663.1;Name=UUE97663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483561.1;locus_tag=NDY24_17950;product=cold-shock protein;protein_id=UUE97663.1;transl_table=11 CP098602.1 Genbank gene 4125595 4126062 . - . ID=gene-NDY24_17955;Name=NDY24_17955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17955 CP098602.1 Protein Homology CDS 4125595 4126062 . - 0 ID=cds-UUE97664.1;Parent=gene-NDY24_17955;Dbxref=NCBI_GP:UUE97664.1;Name=UUE97664.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303254.1;locus_tag=NDY24_17955;product=glycine zipper 2TM domain-containing protein;protein_id=UUE97664.1;transl_table=11 CP098602.1 Genbank gene 4126196 4126624 . - . ID=gene-NDY24_17960;Name=NDY24_17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17960 CP098602.1 Protein Homology CDS 4126196 4126624 . - 0 ID=cds-UUE97665.1;Parent=gene-NDY24_17960;Dbxref=NCBI_GP:UUE97665.1;Name=UUE97665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966688.1;locus_tag=NDY24_17960;product=hypothetical protein;protein_id=UUE97665.1;transl_table=11 CP098602.1 Genbank gene 4126701 4127537 . + . ID=gene-NDY24_17965;Name=NDY24_17965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17965 CP098602.1 Protein Homology CDS 4126701 4127537 . + 0 ID=cds-UUE97666.1;Parent=gene-NDY24_17965;Dbxref=NCBI_GP:UUE97666.1;Name=UUE97666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036615.1;locus_tag=NDY24_17965;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=UUE97666.1;transl_table=11 CP098602.1 Genbank gene 4127574 4128356 . - . ID=gene-NDY24_17970;Name=NDY24_17970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17970 CP098602.1 Protein Homology CDS 4127574 4128356 . - 0 ID=cds-UUE97667.1;Parent=gene-NDY24_17970;Dbxref=NCBI_GP:UUE97667.1;Name=UUE97667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451919.1;locus_tag=NDY24_17970;product=TatD family hydrolase;protein_id=UUE97667.1;transl_table=11 CP098602.1 Genbank gene 4128356 4128571 . - . ID=gene-NDY24_17975;Name=NDY24_17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17975 CP098602.1 Protein Homology CDS 4128356 4128571 . - 0 ID=cds-UUE97668.1;Parent=gene-NDY24_17975;Dbxref=NCBI_GP:UUE97668.1;Name=UUE97668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902710.1;locus_tag=NDY24_17975;product=hypothetical protein;protein_id=UUE97668.1;transl_table=11 CP098602.1 Genbank gene 4128717 4129508 . + . ID=gene-NDY24_17980;Name=NDY24_17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17980 CP098602.1 Protein Homology CDS 4128717 4129508 . + 0 ID=cds-UUE97669.1;Parent=gene-NDY24_17980;Dbxref=NCBI_GP:UUE97669.1;Name=UUE97669.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161798.1;locus_tag=NDY24_17980;product=glycine zipper 2TM domain-containing protein;protein_id=UUE97669.1;transl_table=11 CP098602.1 Genbank gene 4129681 4130856 . + . ID=gene-NDY24_17985;Name=NDY24_17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17985 CP098602.1 Protein Homology CDS 4129681 4130856 . + 0 ID=cds-UUE97670.1;Parent=gene-NDY24_17985;Dbxref=NCBI_GP:UUE97670.1;Name=UUE97670.1;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988347.1;locus_tag=NDY24_17985;product=acyl-CoA dehydrogenase family protein;protein_id=UUE97670.1;transl_table=11 CP098602.1 Genbank gene 4130915 4133482 . + . ID=gene-NDY24_17990;Name=NDY24_17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17990 CP098602.1 Protein Homology CDS 4130915 4133482 . + 0 ID=cds-UUF00464.1;Parent=gene-NDY24_17990;Dbxref=NCBI_GP:UUF00464.1;Name=UUF00464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451923.1;locus_tag=NDY24_17990;product=DUF3857 and transglutaminase domain-containing protein;protein_id=UUF00464.1;transl_table=11 CP098602.1 Genbank gene 4133750 4134394 . + . ID=gene-NDY24_17995;Name=NDY24_17995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_17995 CP098602.1 Protein Homology CDS 4133750 4134394 . + 0 ID=cds-UUE97671.1;Parent=gene-NDY24_17995;Dbxref=NCBI_GP:UUE97671.1;Name=UUE97671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902714.1;locus_tag=NDY24_17995;product=glutathione S-transferase family protein;protein_id=UUE97671.1;transl_table=11 CP098602.1 Genbank gene 4134435 4136375 . + . ID=gene-NDY24_18000;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=NDY24_18000 CP098602.1 Protein Homology CDS 4134435 4136375 . + 0 ID=cds-UUE97672.1;Parent=gene-NDY24_18000;Dbxref=NCBI_GP:UUE97672.1;Name=UUE97672.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089787.1;locus_tag=NDY24_18000;product=asparagine synthase (glutamine-hydrolyzing);protein_id=UUE97672.1;transl_table=11 CP098602.1 Genbank gene 4136634 4137188 . + . ID=gene-NDY24_18005;Name=NDY24_18005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18005 CP098602.1 Protein Homology CDS 4136634 4137188 . + 0 ID=cds-UUE97673.1;Parent=gene-NDY24_18005;Dbxref=NCBI_GP:UUE97673.1;Name=UUE97673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972091.1;locus_tag=NDY24_18005;product=NAD(P)H-dependent oxidoreductase;protein_id=UUE97673.1;transl_table=11 CP098602.1 Genbank gene 4137408 4138838 . + . ID=gene-NDY24_18010;Name=NDY24_18010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18010 CP098602.1 Protein Homology CDS 4137408 4138838 . + 0 ID=cds-UUE97674.1;Parent=gene-NDY24_18010;Dbxref=NCBI_GP:UUE97674.1;Name=UUE97674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006377195.1;locus_tag=NDY24_18010;product=replicative DNA helicase;protein_id=UUE97674.1;transl_table=11 CP098602.1 Genbank gene 4139569 4140987 . + . ID=gene-NDY24_18015;Name=NDY24_18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18015 CP098602.1 Protein Homology CDS 4139569 4140987 . + 0 ID=cds-UUE97675.1;Parent=gene-NDY24_18015;Dbxref=NCBI_GP:UUE97675.1;Name=UUE97675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902718.1;locus_tag=NDY24_18015;product=DNA photolyase family protein;protein_id=UUE97675.1;transl_table=11 CP098602.1 Genbank gene 4141122 4141847 . + . ID=gene-NDY24_18020;Name=NDY24_18020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18020 CP098602.1 Protein Homology CDS 4141122 4141847 . + 0 ID=cds-UUE97676.1;Parent=gene-NDY24_18020;Dbxref=NCBI_GP:UUE97676.1;Name=UUE97676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155745.1;locus_tag=NDY24_18020;product=OmpA family protein;protein_id=UUE97676.1;transl_table=11 CP098602.1 Genbank gene 4142833 4143867 . - . ID=gene-NDY24_18025;Name=NDY24_18025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18025 CP098602.1 Protein Homology CDS 4142833 4143867 . - 0 ID=cds-UUE97677.1;Parent=gene-NDY24_18025;Dbxref=NCBI_GP:UUE97677.1;Name=UUE97677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155746.1;locus_tag=NDY24_18025;product=LysR family transcriptional regulator;protein_id=UUE97677.1;transl_table=11 CP098602.1 Genbank gene 4143997 4144224 . + . ID=gene-NDY24_18030;Name=NDY24_18030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18030 CP098602.1 Protein Homology CDS 4143997 4144224 . + 0 ID=cds-UUE97678.1;Parent=gene-NDY24_18030;Dbxref=NCBI_GP:UUE97678.1;Name=UUE97678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163298.1;locus_tag=NDY24_18030;product=hypothetical protein;protein_id=UUE97678.1;transl_table=11 CP098602.1 Genbank gene 4144221 4145033 . + . ID=gene-NDY24_18035;Name=NDY24_18035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18035 CP098602.1 Protein Homology CDS 4144221 4145033 . + 0 ID=cds-UUE97679.1;Parent=gene-NDY24_18035;Dbxref=NCBI_GP:UUE97679.1;Name=UUE97679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089791.1;locus_tag=NDY24_18035;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=UUE97679.1;transl_table=11 CP098602.1 Genbank gene 4145018 4146175 . + . ID=gene-NDY24_18040;Name=NDY24_18040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18040 CP098602.1 Protein Homology CDS 4145018 4146175 . + 0 ID=cds-UUE97680.1;Parent=gene-NDY24_18040;Dbxref=NCBI_GP:UUE97680.1;Name=UUE97680.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036629.1;locus_tag=NDY24_18040;product=efflux RND transporter periplasmic adaptor subunit;protein_id=UUE97680.1;transl_table=11 CP098602.1 Genbank gene 4146354 4149527 . + . ID=gene-NDY24_18045;Name=NDY24_18045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18045 CP098602.1 Protein Homology CDS 4146354 4149527 . + 0 ID=cds-UUE97681.1;Parent=gene-NDY24_18045;Dbxref=NCBI_GP:UUE97681.1;Name=UUE97681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016944196.1;locus_tag=NDY24_18045;product=efflux RND transporter permease subunit;protein_id=UUE97681.1;transl_table=11 CP098602.1 Genbank gene 4149566 4150297 . + . ID=gene-NDY24_18050;Name=NDY24_18050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18050 CP098602.1 Protein Homology CDS 4149566 4150297 . + 0 ID=cds-UUE97682.1;Parent=gene-NDY24_18050;Dbxref=NCBI_GP:UUE97682.1;Name=UUE97682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483598.1;locus_tag=NDY24_18050;product=SDR family oxidoreductase;protein_id=UUE97682.1;transl_table=11 CP098602.1 Genbank gene 4150291 4151715 . + . ID=gene-NDY24_18055;Name=NDY24_18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18055 CP098602.1 Protein Homology CDS 4150291 4151715 . + 0 ID=cds-UUE97683.1;Parent=gene-NDY24_18055;Dbxref=NCBI_GP:UUE97683.1;Name=UUE97683.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159387.1;locus_tag=NDY24_18055;product=efflux transporter outer membrane subunit;protein_id=UUE97683.1;transl_table=11 CP098602.1 Genbank gene 4151761 4152735 . - . ID=gene-NDY24_18060;Name=NDY24_18060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18060 CP098602.1 Protein Homology CDS 4151761 4152735 . - 0 ID=cds-UUE97684.1;Parent=gene-NDY24_18060;Dbxref=NCBI_GP:UUE97684.1;Name=UUE97684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503843.1;locus_tag=NDY24_18060;product=GGDEF domain-containing protein;protein_id=UUE97684.1;transl_table=11 CP098602.1 Genbank gene 4152829 4153134 . + . ID=gene-NDY24_18065;Name=NDY24_18065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18065 CP098602.1 Protein Homology CDS 4152829 4153134 . + 0 ID=cds-UUE97685.1;Parent=gene-NDY24_18065;Dbxref=NCBI_GP:UUE97685.1;Name=UUE97685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155753.1;locus_tag=NDY24_18065;product=hypothetical protein;protein_id=UUE97685.1;transl_table=11 CP098602.1 Genbank gene 4153258 4154958 . - . ID=gene-NDY24_18070;Name=NDY24_18070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18070 CP098602.1 Protein Homology CDS 4153258 4154958 . - 0 ID=cds-UUE97686.1;Parent=gene-NDY24_18070;Dbxref=NCBI_GP:UUE97686.1;Name=UUE97686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050947.1;locus_tag=NDY24_18070;product=GGDEF domain-containing protein;protein_id=UUE97686.1;transl_table=11 CP098602.1 Genbank gene 4155297 4155467 . + . ID=gene-NDY24_18075;Name=NDY24_18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18075 CP098602.1 Protein Homology CDS 4155297 4155467 . + 0 ID=cds-UUE97687.1;Parent=gene-NDY24_18075;Dbxref=NCBI_GP:UUE97687.1;Name=UUE97687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449450.1;locus_tag=NDY24_18075;product=hypothetical protein;protein_id=UUE97687.1;transl_table=11 CP098602.1 Genbank gene 4155722 4156006 . - . ID=gene-NDY24_18080;Name=NDY24_18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18080 CP098602.1 Protein Homology CDS 4155722 4156006 . - 0 ID=cds-UUE97688.1;Parent=gene-NDY24_18080;Dbxref=NCBI_GP:UUE97688.1;Name=UUE97688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050951.1;locus_tag=NDY24_18080;product=hypothetical protein;protein_id=UUE97688.1;transl_table=11 CP098602.1 Genbank gene 4156433 4156762 . + . ID=gene-NDY24_18085;Name=NDY24_18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18085 CP098602.1 Protein Homology CDS 4156433 4156762 . + 0 ID=cds-UUE97689.1;Parent=gene-NDY24_18085;Dbxref=NCBI_GP:UUE97689.1;Name=UUE97689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050952.1;locus_tag=NDY24_18085;product=helix-turn-helix domain-containing protein;protein_id=UUE97689.1;transl_table=11 CP098602.1 Genbank gene 4156755 4157582 . + . ID=gene-NDY24_18090;Name=NDY24_18090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18090 CP098602.1 Protein Homology CDS 4156755 4157582 . + 0 ID=cds-UUE97690.1;Parent=gene-NDY24_18090;Dbxref=NCBI_GP:UUE97690.1;Name=UUE97690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050953.1;locus_tag=NDY24_18090;product=ImmA/IrrE family metallo-endopeptidase;protein_id=UUE97690.1;transl_table=11 CP098602.1 Genbank gene 4157814 4158047 . - . ID=gene-NDY24_18095;Name=NDY24_18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18095 CP098602.1 GeneMarkS-2+ CDS 4157814 4158047 . - 0 ID=cds-UUE97691.1;Parent=gene-NDY24_18095;Dbxref=NCBI_GP:UUE97691.1;Name=UUE97691.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_18095;product=hypothetical protein;protein_id=UUE97691.1;transl_table=11 CP098602.1 Genbank pseudogene 4158266 4159229 . + . ID=gene-NDY24_18100;Name=NDY24_18100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18100;pseudo=true CP098602.1 Protein Homology CDS 4158266 4159229 . + 0 ID=cds-NDY24_18100;Parent=gene-NDY24_18100;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037261.1;locus_tag=NDY24_18100;product=IS1595 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4159301 4159705 . + . ID=gene-NDY24_18105;Name=NDY24_18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18105 CP098602.1 Protein Homology CDS 4159301 4159705 . + 0 ID=cds-UUE97692.1;Parent=gene-NDY24_18105;Dbxref=NCBI_GP:UUE97692.1;Name=UUE97692.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050954.1;locus_tag=NDY24_18105;product=H-NS histone family protein;protein_id=UUE97692.1;transl_table=11 CP098602.1 Genbank gene 4160159 4161190 . - . ID=gene-NDY24_18110;Name=NDY24_18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18110 CP098602.1 Protein Homology CDS 4160159 4161190 . - 0 ID=cds-UUE97693.1;Parent=gene-NDY24_18110;Dbxref=NCBI_GP:UUE97693.1;Name=UUE97693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348379.1;locus_tag=NDY24_18110;product=hypothetical protein;protein_id=UUE97693.1;transl_table=11 CP098602.1 Genbank gene 4161467 4162429 . + . ID=gene-NDY24_18115;Name=NDY24_18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18115 CP098602.1 Protein Homology CDS 4161467 4162429 . + 0 ID=cds-UUE97694.1;Parent=gene-NDY24_18115;Dbxref=NCBI_GP:UUE97694.1;Name=UUE97694.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037261.1;locus_tag=NDY24_18115;product=IS1595 family transposase;protein_id=UUE97694.1;transl_table=11 CP098602.1 Genbank gene 4162885 4164177 . - . ID=gene-NDY24_18120;Name=NDY24_18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18120 CP098602.1 Protein Homology CDS 4162885 4164177 . - 0 ID=cds-UUE97695.1;Parent=gene-NDY24_18120;Dbxref=NCBI_GP:UUE97695.1;Name=UUE97695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806239.1;locus_tag=NDY24_18120;product=M12 family metallo-peptidase;protein_id=UUE97695.1;transl_table=11 CP098602.1 Genbank gene 4164487 4165449 . - . ID=gene-NDY24_18125;Name=NDY24_18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18125 CP098602.1 Protein Homology CDS 4164487 4165449 . - 0 ID=cds-UUE97696.1;Parent=gene-NDY24_18125;Dbxref=NCBI_GP:UUE97696.1;Name=UUE97696.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037261.1;locus_tag=NDY24_18125;product=IS1595 family transposase;protein_id=UUE97696.1;transl_table=11 CP098602.1 Genbank pseudogene 4166075 4166952 . - . ID=gene-NDY24_18130;Name=NDY24_18130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18130;pseudo=true CP098602.1 Protein Homology CDS 4166075 4166952 . - 0 ID=cds-NDY24_18130;Parent=gene-NDY24_18130;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=NDY24_18130;product=IS3 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4167375 4167653 . - . ID=gene-NDY24_18135;Name=NDY24_18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18135 CP098602.1 GeneMarkS-2+ CDS 4167375 4167653 . - 0 ID=cds-UUE97697.1;Parent=gene-NDY24_18135;Dbxref=NCBI_GP:UUE97697.1;Name=UUE97697.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_18135;product=hypothetical protein;protein_id=UUE97697.1;transl_table=11 CP098602.1 Genbank pseudogene 4168449 4169435 . - . ID=gene-NDY24_18140;Name=NDY24_18140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18140;pseudo=true CP098602.1 Protein Homology CDS 4168449 4169435 . - 0 ID=cds-NDY24_18140;Parent=gene-NDY24_18140;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=NDY24_18140;product=IS5 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4169651 4170730 . + . ID=gene-NDY24_18145;Name=NDY24_18145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18145;pseudo=true CP098602.1 Protein Homology CDS 4169651 4170730 . + 0 ID=cds-NDY24_18145;Parent=gene-NDY24_18145;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611839.1;locus_tag=NDY24_18145;product=IS3 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4170867 4174615 . - . ID=gene-NDY24_18150;Name=NDY24_18150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18150;pseudo=true CP098602.1 Protein Homology CDS 4170867 4174615 . - 0 ID=cds-NDY24_18150;Parent=gene-NDY24_18150;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162515.1;locus_tag=NDY24_18150;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4174946 4175521 . - . ID=gene-NDY24_18155;Name=NDY24_18155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18155;pseudo=true CP098602.1 Protein Homology CDS 4174946 4175521 . - 0 ID=cds-NDY24_18155;Parent=gene-NDY24_18155;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450528.1;locus_tag=NDY24_18155;product=DUF1629 domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4176345 4176506 . - . ID=gene-NDY24_18160;Name=NDY24_18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18160 CP098602.1 GeneMarkS-2+ CDS 4176345 4176506 . - 0 ID=cds-UUE97698.1;Parent=gene-NDY24_18160;Dbxref=NCBI_GP:UUE97698.1;Name=UUE97698.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_18160;product=hypothetical protein;protein_id=UUE97698.1;transl_table=11 CP098602.1 Genbank gene 4177089 4177511 . - . ID=gene-NDY24_18165;Name=NDY24_18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18165 CP098602.1 Protein Homology CDS 4177089 4177511 . - 0 ID=cds-UUE97699.1;Parent=gene-NDY24_18165;Dbxref=NCBI_GP:UUE97699.1;Name=UUE97699.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: protein motif:HMM:NF023444.2;locus_tag=NDY24_18165;product=GspH/FimT family pseudopilin;protein_id=UUE97699.1;transl_table=11 CP098602.1 Genbank gene 4177771 4179792 . + . ID=gene-NDY24_18170;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=NDY24_18170 CP098602.1 Protein Homology CDS 4177771 4179792 . + 0 ID=cds-UUE97700.1;Parent=gene-NDY24_18170;Dbxref=NCBI_GP:UUE97700.1;Name=UUE97700.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037621.1;locus_tag=NDY24_18170;product=excinuclease ABC subunit UvrB;protein_id=UUE97700.1;transl_table=11 CP098602.1 Genbank gene 4179890 4179964 . + . ID=gene-NDY24_18175;Name=NDY24_18175;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_18175 CP098602.1 tRNAscan-SE tRNA 4179890 4179964 . + . ID=rna-NDY24_18175;Parent=gene-NDY24_18175;anticodon=(pos:4179922..4179924);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_18175;product=tRNA-Val CP098602.1 tRNAscan-SE exon 4179890 4179964 . + . ID=exon-NDY24_18175-1;Parent=rna-NDY24_18175;anticodon=(pos:4179922..4179924);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_18175;product=tRNA-Val CP098602.1 Genbank pseudogene 4180155 4180395 . + . ID=gene-NDY24_18180;Name=NDY24_18180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18180;pseudo=true CP098602.1 Protein Homology CDS 4180155 4180395 . + 0 ID=cds-NDY24_18180;Parent=gene-NDY24_18180;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901079.1;locus_tag=NDY24_18180;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4180619 4182105 . + . ID=gene-NDY24_18185;Name=NDY24_18185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18185;pseudo=true CP098602.1 Protein Homology CDS 4180619 4182105 . + 0 ID=cds-NDY24_18185;Parent=gene-NDY24_18185;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014581.2;locus_tag=NDY24_18185;product=type IV secretory system conjugative DNA transfer family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4182456 4182866 . + . ID=gene-NDY24_18190;Name=NDY24_18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18190 CP098602.1 Protein Homology CDS 4182456 4182866 . + 0 ID=cds-UUF00465.1;Parent=gene-NDY24_18190;Dbxref=NCBI_GP:UUF00465.1;Name=UUF00465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371304.1;locus_tag=NDY24_18190;product=toxin co-regulated pilus biosynthesis Q family protein;protein_id=UUF00465.1;transl_table=11 CP098602.1 Genbank gene 4182992 4183978 . + . ID=gene-NDY24_18195;Name=NDY24_18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18195 CP098602.1 Protein Homology CDS 4182992 4183978 . + 0 ID=cds-UUE97701.1;Parent=gene-NDY24_18195;Dbxref=NCBI_GP:UUE97701.1;Name=UUE97701.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437991.1;locus_tag=NDY24_18195;product=VirB8/TrbF family protein;protein_id=UUE97701.1;transl_table=11 CP098602.1 Genbank gene 4183975 4184742 . + . ID=gene-NDY24_18200;Name=NDY24_18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18200 CP098602.1 Protein Homology CDS 4183975 4184742 . + 0 ID=cds-UUE97702.1;Parent=gene-NDY24_18200;Dbxref=NCBI_GP:UUE97702.1;Name=UUE97702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920257.1;locus_tag=NDY24_18200;product=TrbG/VirB9 family P-type conjugative transfer protein;protein_id=UUE97702.1;transl_table=11 CP098602.1 Genbank gene 4185114 4185911 . + . ID=gene-NDY24_18205;Name=NDY24_18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18205 CP098602.1 Protein Homology CDS 4185114 4185911 . + 0 ID=cds-UUF00466.1;Parent=gene-NDY24_18205;Dbxref=NCBI_GP:UUF00466.1;Name=UUF00466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158328.1;locus_tag=NDY24_18205;product=hypothetical protein;protein_id=UUF00466.1;transl_table=11 CP098602.1 Genbank gene 4185908 4186966 . + . ID=gene-NDY24_18210;Name=virB11;gbkey=Gene;gene=virB11;gene_biotype=protein_coding;locus_tag=NDY24_18210 CP098602.1 Protein Homology CDS 4185908 4186966 . + 0 ID=cds-UUE97703.1;Parent=gene-NDY24_18210;Dbxref=NCBI_GP:UUE97703.1;Name=UUE97703.1;Ontology_term=GO:0044097,GO:0043684;gbkey=CDS;gene=virB11;go_component=type IV secretion system complex|0043684||IEA;go_process=secretion by the type IV secretion system|0044097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437994.1;locus_tag=NDY24_18210;product=P-type DNA transfer ATPase VirB11;protein_id=UUE97703.1;transl_table=11 CP098602.1 Genbank pseudogene 4187023 4187766 . + . ID=gene-NDY24_18215;Name=NDY24_18215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18215;pseudo=true CP098602.1 Protein Homology CDS 4187023 4187766 . + 0 ID=cds-NDY24_18215;Parent=gene-NDY24_18215;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158787.1;locus_tag=NDY24_18215;product=lytic transglycosylase domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4187903 4188307 . + . ID=gene-NDY24_18220;Name=NDY24_18220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18220 CP098602.1 Protein Homology CDS 4187903 4188307 . + 0 ID=cds-UUE97704.1;Parent=gene-NDY24_18220;Dbxref=NCBI_GP:UUE97704.1;Name=UUE97704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437996.1;locus_tag=NDY24_18220;product=TrbC/VirB2 family protein;protein_id=UUE97704.1;transl_table=11 CP098602.1 Genbank gene 4188300 4188611 . + . ID=gene-NDY24_18225;Name=NDY24_18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18225 CP098602.1 Protein Homology CDS 4188300 4188611 . + 0 ID=cds-UUE97705.1;Parent=gene-NDY24_18225;Dbxref=NCBI_GP:UUE97705.1;Name=UUE97705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901062.1;locus_tag=NDY24_18225;product=VirB3 family type IV secretion system protein;protein_id=UUE97705.1;transl_table=11 CP098602.1 Genbank gene 4188715 4191171 . + . ID=gene-NDY24_18230;Name=NDY24_18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18230 CP098602.1 Protein Homology CDS 4188715 4191171 . + 0 ID=cds-UUE97706.1;Parent=gene-NDY24_18230;Dbxref=NCBI_GP:UUE97706.1;Name=UUE97706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914226.1;locus_tag=NDY24_18230;product=VirB4 family type IV secretion/conjugal transfer ATPase;protein_id=UUE97706.1;transl_table=11 CP098602.1 Genbank gene 4191346 4191423 . + . ID=gene-NDY24_18235;Name=NDY24_18235;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_18235 CP098602.1 cmsearch ncRNA 4191346 4191423 . + . ID=rna-NDY24_18235;Parent=gene-NDY24_18235;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_18235;product=sX9 sRNA CP098602.1 cmsearch exon 4191346 4191423 . + . ID=exon-NDY24_18235-1;Parent=rna-NDY24_18235;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_18235;product=sX9 sRNA CP098602.1 Genbank gene 4192010 4193914 . + . ID=gene-NDY24_18240;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=NDY24_18240 CP098602.1 Protein Homology CDS 4192010 4193914 . + 0 ID=cds-UUE97707.1;Parent=gene-NDY24_18240;Dbxref=NCBI_GP:UUE97707.1;Name=UUE97707.1;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303507.1;locus_tag=NDY24_18240;product=threonine--tRNA ligase;protein_id=UUE97707.1;transl_table=11 CP098602.1 Genbank gene 4193963 4194505 . + . ID=gene-NDY24_18245;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=NDY24_18245 CP098602.1 Protein Homology CDS 4193963 4194505 . + 0 ID=cds-UUF00467.1;Parent=gene-NDY24_18245;Dbxref=NCBI_GP:UUF00467.1;Name=UUF00467.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660568.1;locus_tag=NDY24_18245;product=translation initiation factor IF-3;protein_id=UUF00467.1;transl_table=11 CP098602.1 Genbank gene 4194746 4194943 . + . ID=gene-NDY24_18250;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=NDY24_18250 CP098602.1 Protein Homology CDS 4194746 4194943 . + 0 ID=cds-UUE97708.1;Parent=gene-NDY24_18250;Dbxref=NCBI_GP:UUE97708.1;Name=UUE97708.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005410436.1;locus_tag=NDY24_18250;product=50S ribosomal protein L35;protein_id=UUE97708.1;transl_table=11 CP098602.1 Genbank gene 4194954 4195313 . + . ID=gene-NDY24_18255;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=NDY24_18255 CP098602.1 Protein Homology CDS 4194954 4195313 . + 0 ID=cds-UUE97709.1;Parent=gene-NDY24_18255;Dbxref=NCBI_GP:UUE97709.1;Name=UUE97709.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000124858.1;locus_tag=NDY24_18255;product=50S ribosomal protein L20;protein_id=UUE97709.1;transl_table=11 CP098602.1 Genbank gene 4195600 4196595 . + . ID=gene-NDY24_18260;Name=NDY24_18260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18260 CP098602.1 Protein Homology CDS 4195600 4196595 . + 0 ID=cds-UUE97710.1;Parent=gene-NDY24_18260;Dbxref=NCBI_GP:UUE97710.1;Name=UUE97710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019299936.1;locus_tag=NDY24_18260;product=phenylalanine--tRNA ligase subunit alpha;protein_id=UUE97710.1;transl_table=11 CP098602.1 Genbank gene 4196725 4199103 . + . ID=gene-NDY24_18265;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=NDY24_18265 CP098602.1 Protein Homology CDS 4196725 4199103 . + 0 ID=cds-UUE97711.1;Parent=gene-NDY24_18265;Dbxref=NCBI_GP:UUE97711.1;Name=UUE97711.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903311.1;locus_tag=NDY24_18265;product=phenylalanine--tRNA ligase subunit beta;protein_id=UUE97711.1;transl_table=11 CP098602.1 Genbank gene 4199125 4199424 . + . ID=gene-NDY24_18270;Name=NDY24_18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18270 CP098602.1 Protein Homology CDS 4199125 4199424 . + 0 ID=cds-UUE97712.1;Parent=gene-NDY24_18270;Dbxref=NCBI_GP:UUE97712.1;Name=UUE97712.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811076.1;locus_tag=NDY24_18270;product=integration host factor subunit alpha;protein_id=UUE97712.1;transl_table=11 CP098602.1 Genbank gene 4199405 4199761 . + . ID=gene-NDY24_18275;Name=NDY24_18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18275 CP098602.1 Protein Homology CDS 4199405 4199761 . + 0 ID=cds-UUE97713.1;Parent=gene-NDY24_18275;Dbxref=NCBI_GP:UUE97713.1;Name=UUE97713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019182707.1;locus_tag=NDY24_18275;product=MerR family transcriptional regulator;protein_id=UUE97713.1;transl_table=11 CP098602.1 Genbank gene 4199823 4199899 . + . ID=gene-NDY24_18280;Name=NDY24_18280;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_18280 CP098602.1 tRNAscan-SE tRNA 4199823 4199899 . + . ID=rna-NDY24_18280;Parent=gene-NDY24_18280;anticodon=(pos:4199857..4199859);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_18280;product=tRNA-Pro CP098602.1 tRNAscan-SE exon 4199823 4199899 . + . ID=exon-NDY24_18280-1;Parent=rna-NDY24_18280;anticodon=(pos:4199857..4199859);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_18280;product=tRNA-Pro CP098602.1 Genbank gene 4200372 4201070 . + . ID=gene-NDY24_18285;Name=NDY24_18285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18285 CP098602.1 Protein Homology CDS 4200372 4201070 . + 0 ID=cds-UUE97714.1;Parent=gene-NDY24_18285;Dbxref=NCBI_GP:UUE97714.1;Name=UUE97714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112207.1;locus_tag=NDY24_18285;product=polysaccharide export protein;protein_id=UUE97714.1;transl_table=11 CP098602.1 Genbank gene 4201052 4202491 . + . ID=gene-NDY24_18290;Name=NDY24_18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18290 CP098602.1 Protein Homology CDS 4201052 4202491 . + 0 ID=cds-UUE97715.1;Parent=gene-NDY24_18290;Dbxref=NCBI_GP:UUE97715.1;Name=UUE97715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157116.1;locus_tag=NDY24_18290;product=GumC family protein;protein_id=UUE97715.1;transl_table=11 CP098602.1 Genbank gene 4202735 4204189 . + . ID=gene-NDY24_18295;Name=NDY24_18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18295 CP098602.1 Protein Homology CDS 4202735 4204189 . + 0 ID=cds-UUE97716.1;Parent=gene-NDY24_18295;Dbxref=NCBI_GP:UUE97716.1;Name=UUE97716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914017.1;locus_tag=NDY24_18295;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=UUE97716.1;transl_table=11 CP098602.1 Genbank gene 4204284 4205570 . + . ID=gene-NDY24_18300;Name=NDY24_18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18300 CP098602.1 Protein Homology CDS 4204284 4205570 . + 0 ID=cds-UUF00468.1;Parent=gene-NDY24_18300;Dbxref=NCBI_GP:UUF00468.1;Name=UUF00468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117349.1;locus_tag=NDY24_18300;product=polysaccharide biosynthesis protein GumE;protein_id=UUF00468.1;transl_table=11 CP098602.1 Genbank gene 4205567 4206658 . + . ID=gene-NDY24_18305;Name=NDY24_18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18305 CP098602.1 Protein Homology CDS 4205567 4206658 . + 0 ID=cds-UUE97717.1;Parent=gene-NDY24_18305;Dbxref=NCBI_GP:UUE97717.1;Name=UUE97717.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574566.1;locus_tag=NDY24_18305;product=acyltransferase family protein;protein_id=UUE97717.1;transl_table=11 CP098602.1 Genbank gene 4206672 4207760 . + . ID=gene-NDY24_18310;Name=NDY24_18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18310 CP098602.1 Protein Homology CDS 4206672 4207760 . + 0 ID=cds-UUE97718.1;Parent=gene-NDY24_18310;Dbxref=NCBI_GP:UUE97718.1;Name=UUE97718.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974718.1;locus_tag=NDY24_18310;product=acyltransferase family protein;protein_id=UUE97718.1;transl_table=11 CP098602.1 Genbank gene 4207828 4208970 . + . ID=gene-NDY24_18315;Name=NDY24_18315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18315 CP098602.1 Protein Homology CDS 4207828 4208970 . + 0 ID=cds-UUE97719.1;Parent=gene-NDY24_18315;Dbxref=NCBI_GP:UUE97719.1;Name=UUE97719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484848.1;locus_tag=NDY24_18315;product=glycosyltransferase family 4 protein;protein_id=UUE97719.1;transl_table=11 CP098602.1 Genbank gene 4208967 4210016 . + . ID=gene-NDY24_18320;Name=NDY24_18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18320 CP098602.1 Protein Homology CDS 4208967 4210016 . + 0 ID=cds-UUE97720.1;Parent=gene-NDY24_18320;Dbxref=NCBI_GP:UUE97720.1;Name=UUE97720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157110.1;locus_tag=NDY24_18320;product=GDP-mannose--glycolipid 4-beta-D-mannosyltransferase;protein_id=UUE97720.1;transl_table=11 CP098602.1 Genbank gene 4210034 4211518 . + . ID=gene-NDY24_18325;Name=NDY24_18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18325 CP098602.1 Protein Homology CDS 4210034 4211518 . + 0 ID=cds-UUE97721.1;Parent=gene-NDY24_18325;Dbxref=NCBI_GP:UUE97721.1;Name=UUE97721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157109.1;locus_tag=NDY24_18325;product=lipopolysaccharide biosynthesis protein;protein_id=UUE97721.1;transl_table=11 CP098602.1 Genbank gene 4211583 4212782 . + . ID=gene-NDY24_18330;Name=NDY24_18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18330 CP098602.1 Protein Homology CDS 4211583 4212782 . + 0 ID=cds-UUE97722.1;Parent=gene-NDY24_18330;Dbxref=NCBI_GP:UUE97722.1;Name=UUE97722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363526.1;locus_tag=NDY24_18330;product=glycosyltransferase;protein_id=UUE97722.1;transl_table=11 CP098602.1 Genbank gene 4212823 4213617 . + . ID=gene-NDY24_18335;Name=NDY24_18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18335 CP098602.1 Protein Homology CDS 4212823 4213617 . + 0 ID=cds-UUE97723.1;Parent=gene-NDY24_18335;Dbxref=NCBI_GP:UUE97723.1;Name=UUE97723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484852.1;locus_tag=NDY24_18335;product=polysaccharide pyruvyl transferase family protein;protein_id=UUE97723.1;transl_table=11 CP098602.1 Genbank gene 4213622 4214416 . + . ID=gene-NDY24_18340;Name=NDY24_18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18340 CP098602.1 Protein Homology CDS 4213622 4214416 . + 0 ID=cds-UUE97724.1;Parent=gene-NDY24_18340;Dbxref=NCBI_GP:UUE97724.1;Name=UUE97724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157106.1;locus_tag=NDY24_18340;product=WecB/TagA/CpsF family glycosyltransferase;protein_id=UUE97724.1;transl_table=11 CP098602.1 Genbank gene 4214451 4214912 . + . ID=gene-NDY24_18345;Name=NDY24_18345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18345 CP098602.1 Protein Homology CDS 4214451 4214912 . + 0 ID=cds-UUE97725.1;Parent=gene-NDY24_18345;Dbxref=NCBI_GP:UUE97725.1;Name=UUE97725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914032.1;locus_tag=NDY24_18345;product=cupin domain-containing protein;protein_id=UUE97725.1;transl_table=11 CP098602.1 Genbank gene 4215005 4216042 . + . ID=gene-NDY24_18350;Name=NDY24_18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18350 CP098602.1 Protein Homology CDS 4215005 4216042 . + 0 ID=cds-UUE97726.1;Parent=gene-NDY24_18350;Dbxref=NCBI_GP:UUE97726.1;Name=UUE97726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017173582.1;locus_tag=NDY24_18350;product=TraB/GumN family protein;protein_id=UUE97726.1;transl_table=11 CP098602.1 Genbank gene 4216157 4217188 . + . ID=gene-NDY24_18355;Name=NDY24_18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18355 CP098602.1 Protein Homology CDS 4216157 4217188 . + 0 ID=cds-UUF00469.1;Parent=gene-NDY24_18355;Dbxref=NCBI_GP:UUF00469.1;Name=UUF00469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174298.1;locus_tag=NDY24_18355;product=ketoacyl-ACP synthase III;protein_id=UUF00469.1;transl_table=11 CP098602.1 Genbank gene 4217224 4218072 . + . ID=gene-NDY24_18360;Name=NDY24_18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18360 CP098602.1 Protein Homology CDS 4217224 4218072 . + 0 ID=cds-UUE97727.1;Parent=gene-NDY24_18360;Dbxref=NCBI_GP:UUE97727.1;Name=UUE97727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157102.1;locus_tag=NDY24_18360;product=MBL fold metallo-hydrolase;protein_id=UUE97727.1;transl_table=11 CP098602.1 Genbank gene 4218069 4219028 . + . ID=gene-NDY24_18365;Name=NDY24_18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18365 CP098602.1 Protein Homology CDS 4218069 4219028 . + 0 ID=cds-UUE97728.1;Parent=gene-NDY24_18365;Dbxref=NCBI_GP:UUE97728.1;Name=UUE97728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574543.1;locus_tag=NDY24_18365;product=NAD(P)-dependent oxidoreductase;protein_id=UUE97728.1;transl_table=11 CP098602.1 Genbank pseudogene 4219019 4220172 . + . ID=gene-NDY24_18370;Name=NDY24_18370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18370;pseudo=true CP098602.1 Protein Homology CDS 4219019 4220172 . + 0 ID=cds-NDY24_18370;Parent=gene-NDY24_18370;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010378234.1;locus_tag=NDY24_18370;product=glycosyltransferase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4220150 4220743 . + . ID=gene-NDY24_18375;Name=NDY24_18375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18375;pseudo=true CP098602.1 Protein Homology CDS 4220150 4220743 . + 0 ID=cds-NDY24_18375;Parent=gene-NDY24_18375;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974702.1;locus_tag=NDY24_18375;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4220750 4222005 . + . ID=gene-NDY24_18380;Name=NDY24_18380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18380;pseudo=true CP098602.1 Protein Homology CDS 4220750 4222005 . + 0 ID=cds-NDY24_18380;Parent=gene-NDY24_18380;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016848791.1;locus_tag=NDY24_18380;product=glycosyl transferase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4222510 4224426 . - . ID=gene-NDY24_18385;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=NDY24_18385 CP098602.1 Protein Homology CDS 4222510 4224426 . - 0 ID=cds-UUE97729.1;Parent=gene-NDY24_18385;Dbxref=NCBI_GP:UUE97729.1;Name=UUE97729.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037575.1;locus_tag=NDY24_18385;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=UUE97729.1;transl_table=11 CP098602.1 Genbank gene 4224614 4225270 . - . ID=gene-NDY24_18390;Name=NDY24_18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18390 CP098602.1 Protein Homology CDS 4224614 4225270 . - 0 ID=cds-UUE97730.1;Parent=gene-NDY24_18390;Dbxref=NCBI_GP:UUE97730.1;Name=UUE97730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157096.1;locus_tag=NDY24_18390;product=HNH endonuclease;protein_id=UUE97730.1;transl_table=11 CP098602.1 Genbank gene 4225320 4227113 . - . ID=gene-NDY24_18395;Name=NDY24_18395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18395 CP098602.1 Protein Homology CDS 4225320 4227113 . - 0 ID=cds-UUE97731.1;Parent=gene-NDY24_18395;Dbxref=NCBI_GP:UUE97731.1;Name=UUE97731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010378222.1;locus_tag=NDY24_18395;product=acyl-CoA dehydrogenase C-terminal domain-containing protein;protein_id=UUE97731.1;transl_table=11 CP098602.1 Genbank gene 4227151 4227627 . - . ID=gene-NDY24_18400;Name=NDY24_18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18400 CP098602.1 Protein Homology CDS 4227151 4227627 . - 0 ID=cds-UUE97732.1;Parent=gene-NDY24_18400;Dbxref=NCBI_GP:UUE97732.1;Name=UUE97732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448491.1;locus_tag=NDY24_18400;product=LEA type 2 family protein;protein_id=UUE97732.1;transl_table=11 CP098602.1 Genbank gene 4227735 4228271 . - . ID=gene-NDY24_18405;Name=NDY24_18405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18405 CP098602.1 Protein Homology CDS 4227735 4228271 . - 0 ID=cds-UUE97733.1;Parent=gene-NDY24_18405;Dbxref=NCBI_GP:UUE97733.1;Name=UUE97733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157093.1;locus_tag=NDY24_18405;product=lipocalin family protein;protein_id=UUE97733.1;transl_table=11 CP098602.1 Genbank gene 4228452 4228527 . + . ID=gene-NDY24_18410;Name=NDY24_18410;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_18410 CP098602.1 tRNAscan-SE tRNA 4228452 4228527 . + . ID=rna-NDY24_18410;Parent=gene-NDY24_18410;anticodon=(pos:4228485..4228487);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_18410;product=tRNA-Phe CP098602.1 tRNAscan-SE exon 4228452 4228527 . + . ID=exon-NDY24_18410-1;Parent=rna-NDY24_18410;anticodon=(pos:4228485..4228487);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_18410;product=tRNA-Phe CP098602.1 Genbank gene 4228813 4229079 . + . ID=gene-NDY24_18415;Name=NDY24_18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18415 CP098602.1 Protein Homology CDS 4228813 4229079 . + 0 ID=cds-UUF00470.1;Parent=gene-NDY24_18415;Dbxref=NCBI_GP:UUF00470.1;Name=UUF00470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090462.1;locus_tag=NDY24_18415;product=hypothetical protein;protein_id=UUF00470.1;transl_table=11 CP098602.1 Genbank gene 4229233 4229844 . + . ID=gene-NDY24_18420;Name=NDY24_18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18420 CP098602.1 Protein Homology CDS 4229233 4229844 . + 0 ID=cds-UUE97734.1;Parent=gene-NDY24_18420;Dbxref=NCBI_GP:UUE97734.1;Name=UUE97734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448488.1;locus_tag=NDY24_18420;product=hypothetical protein;protein_id=UUE97734.1;transl_table=11 CP098602.1 Genbank gene 4229861 4230535 . - . ID=gene-NDY24_18425;Name=NDY24_18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18425 CP098602.1 Protein Homology CDS 4229861 4230535 . - 0 ID=cds-UUE97735.1;Parent=gene-NDY24_18425;Dbxref=NCBI_GP:UUE97735.1;Name=UUE97735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448487.1;locus_tag=NDY24_18425;product=methyltransferase domain-containing protein;protein_id=UUE97735.1;transl_table=11 CP098602.1 Genbank gene 4230823 4231155 . + . ID=gene-NDY24_18430;Name=NDY24_18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18430 CP098602.1 Protein Homology CDS 4230823 4231155 . + 0 ID=cds-UUF00471.1;Parent=gene-NDY24_18430;Dbxref=NCBI_GP:UUF00471.1;Name=UUF00471.1;Ontology_term=GO:0022857,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015059047.1;locus_tag=NDY24_18430;product=SMR family transporter;protein_id=UUF00471.1;transl_table=11 CP098602.1 Genbank gene 4231271 4232893 . + . ID=gene-NDY24_18435;Name=NDY24_18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18435 CP098602.1 Protein Homology CDS 4231271 4232893 . + 0 ID=cds-UUE97736.1;Parent=gene-NDY24_18435;Dbxref=NCBI_GP:UUE97736.1;Name=UUE97736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347876.1;locus_tag=NDY24_18435;product=histidine kinase famiy protein;protein_id=UUE97736.1;transl_table=11 CP098602.1 Genbank gene 4233669 4233947 . - . ID=gene-NDY24_18440;Name=NDY24_18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18440 CP098602.1 Protein Homology CDS 4233669 4233947 . - 0 ID=cds-UUE97737.1;Parent=gene-NDY24_18440;Dbxref=NCBI_GP:UUE97737.1;Name=UUE97737.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157086.1;locus_tag=NDY24_18440;product=oxidative damage protection protein;protein_id=UUE97737.1;transl_table=11 CP098602.1 Genbank gene 4234001 4235074 . - . ID=gene-NDY24_18445;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=NDY24_18445 CP098602.1 Protein Homology CDS 4234001 4235074 . - 0 ID=cds-UUE97738.1;Parent=gene-NDY24_18445;Dbxref=NCBI_GP:UUE97738.1;Name=UUE97738.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0004844;gbkey=CDS;gene=mutY;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157085.1;locus_tag=NDY24_18445;product=A/G-specific adenine glycosylase;protein_id=UUE97738.1;transl_table=11 CP098602.1 Genbank pseudogene 4235131 4236817 . - . ID=gene-NDY24_18450;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=pseudogene;locus_tag=NDY24_18450;pseudo=true CP098602.1 Protein Homology CDS 4235131 4236817 . - 0 ID=cds-NDY24_18450;Parent=gene-NDY24_18450;Note=frameshifted;Ontology_term=GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005990528.1;locus_tag=NDY24_18450;product=signal recognition particle-docking protein FtsY;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4237022 4237738 . - . ID=gene-NDY24_18455;Name=NDY24_18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18455 CP098602.1 Protein Homology CDS 4237022 4237738 . - 0 ID=cds-UUF00472.1;Parent=gene-NDY24_18455;Dbxref=NCBI_GP:UUF00472.1;Name=UUF00472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965956.1;locus_tag=NDY24_18455;product=AraC family transcriptional regulator;protein_id=UUF00472.1;transl_table=11 CP098602.1 Genbank gene 4237899 4238837 . + . ID=gene-NDY24_18460;Name=NDY24_18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18460 CP098602.1 Protein Homology CDS 4237899 4238837 . + 0 ID=cds-UUE97739.1;Parent=gene-NDY24_18460;Dbxref=NCBI_GP:UUE97739.1;Name=UUE97739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810965.1;locus_tag=NDY24_18460;product=proline racemase family protein;protein_id=UUE97739.1;transl_table=11 CP098602.1 Genbank pseudogene 4238837 4240096 . + . ID=gene-NDY24_18465;Name=NDY24_18465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18465;pseudo=true CP098602.1 Protein Homology CDS 4238837 4240096 . + 0 ID=cds-NDY24_18465;Parent=gene-NDY24_18465;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037556.1;locus_tag=NDY24_18465;product=FAD-binding oxidoreductase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4240108 4240341 . + . ID=gene-NDY24_18470;Name=NDY24_18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18470 CP098602.1 Protein Homology CDS 4240108 4240341 . + 0 ID=cds-UUF00473.1;Parent=gene-NDY24_18470;Dbxref=NCBI_GP:UUF00473.1;Name=UUF00473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445438.1;locus_tag=NDY24_18470;product=(2Fe-2S)-binding protein;protein_id=UUF00473.1;transl_table=11 CP098602.1 Genbank pseudogene 4240334 4241649 . + . ID=gene-NDY24_18475;Name=NDY24_18475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18475;pseudo=true CP098602.1 Protein Homology CDS 4240334 4241649 . + 0 ID=cds-NDY24_18475;Parent=gene-NDY24_18475;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172038.1;locus_tag=NDY24_18475;product=FAD-dependent oxidoreductase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4241646 4242554 . + . ID=gene-NDY24_18480;Name=NDY24_18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18480 CP098602.1 Protein Homology CDS 4241646 4242554 . + 0 ID=cds-UUE97740.1;Parent=gene-NDY24_18480;Dbxref=NCBI_GP:UUE97740.1;Name=UUE97740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451841.1;locus_tag=NDY24_18480;product=dihydrodipicolinate synthase family protein;protein_id=UUE97740.1;transl_table=11 CP098602.1 Genbank pseudogene 4242767 4244384 . + . ID=gene-NDY24_18485;Name=NDY24_18485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18485;pseudo=true CP098602.1 Protein Homology CDS 4242767 4244384 . + 0 ID=cds-NDY24_18485;Parent=gene-NDY24_18485;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451842.1;locus_tag=NDY24_18485;product=aldehyde dehydrogenase family protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4244381 4245580 . + . ID=gene-NDY24_18490;Name=NDY24_18490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18490;pseudo=true CP098602.1 Protein Homology CDS 4244381 4245580 . + 0 ID=cds-NDY24_18490;Parent=gene-NDY24_18490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157076.1;locus_tag=NDY24_18490;product=Xaa-Pro peptidase family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4245676 4247514 . + . ID=gene-NDY24_18495;Name=NDY24_18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18495 CP098602.1 Protein Homology CDS 4245676 4247514 . + 0 ID=cds-UUF00474.1;Parent=gene-NDY24_18495;Dbxref=NCBI_GP:UUF00474.1;Name=UUF00474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451844.1;locus_tag=NDY24_18495;product=DUF885 family protein;protein_id=UUF00474.1;transl_table=11 CP098602.1 Genbank gene 4247511 4249391 . + . ID=gene-NDY24_18500;Name=NDY24_18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18500 CP098602.1 Protein Homology CDS 4247511 4249391 . + 0 ID=cds-UUE97741.1;Parent=gene-NDY24_18500;Dbxref=NCBI_GP:UUE97741.1;Name=UUE97741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914076.1;locus_tag=NDY24_18500;product=DUF885 family protein;protein_id=UUE97741.1;transl_table=11 CP098602.1 Genbank gene 4249458 4251044 . + . ID=gene-NDY24_18505;Name=NDY24_18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18505 CP098602.1 Protein Homology CDS 4249458 4251044 . + 0 ID=cds-UUE97742.1;Parent=gene-NDY24_18505;Dbxref=NCBI_GP:UUE97742.1;Name=UUE97742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484927.1;locus_tag=NDY24_18505;product=APC family permease;protein_id=UUE97742.1;transl_table=11 CP098602.1 Genbank gene 4251034 4253382 . + . ID=gene-NDY24_18510;Name=NDY24_18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18510 CP098602.1 Protein Homology CDS 4251034 4253382 . + 0 ID=cds-UUE97743.1;Parent=gene-NDY24_18510;Dbxref=NCBI_GP:UUE97743.1;Name=UUE97743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451847.1;locus_tag=NDY24_18510;product=S9 family peptidase;protein_id=UUE97743.1;transl_table=11 CP098602.1 Genbank pseudogene 4253379 4255020 . + . ID=gene-NDY24_18515;Name=NDY24_18515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18515;pseudo=true CP098602.1 Protein Homology CDS 4253379 4255020 . + 0 ID=cds-NDY24_18515;Parent=gene-NDY24_18515;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574367.1;locus_tag=NDY24_18515;product=DUF5597 domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4255282 4255548 . + . ID=gene-NDY24_18520;Name=NDY24_18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18520 CP098602.1 Protein Homology CDS 4255282 4255548 . + 0 ID=cds-UUE97744.1;Parent=gene-NDY24_18520;Dbxref=NCBI_GP:UUE97744.1;Name=UUE97744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010378174.1;locus_tag=NDY24_18520;product=hypothetical protein;protein_id=UUE97744.1;transl_table=11 CP098602.1 Genbank pseudogene 4256146 4257230 . - . ID=gene-NDY24_18525;Name=NDY24_18525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18525;pseudo=true CP098602.1 Protein Homology CDS 4256146 4257230 . - 0 ID=cds-NDY24_18525;Parent=gene-NDY24_18525;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914081.1;locus_tag=NDY24_18525;product=DUF5694 domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4257639 4258805 . - . ID=gene-NDY24_18530;Name=NDY24_18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18530 CP098602.1 Protein Homology CDS 4257639 4258805 . - 0 ID=cds-UUE97745.1;Parent=gene-NDY24_18530;Dbxref=NCBI_GP:UUE97745.1;Name=UUE97745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901988.1;locus_tag=NDY24_18530;product=DUF5694 domain-containing protein;protein_id=UUE97745.1;transl_table=11 CP098602.1 Genbank gene 4258995 4260560 . - . ID=gene-NDY24_18535;Name=NDY24_18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18535 CP098602.1 Protein Homology CDS 4258995 4260560 . - 0 ID=cds-UUE97746.1;Parent=gene-NDY24_18535;Dbxref=NCBI_GP:UUE97746.1;Name=UUE97746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303782.1;locus_tag=NDY24_18535;product=S53 family peptidase;protein_id=UUE97746.1;transl_table=11 CP098602.1 Genbank gene 4261066 4263423 . + . ID=gene-NDY24_18540;Name=NDY24_18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18540 CP098602.1 Protein Homology CDS 4261066 4263423 . + 0 ID=cds-UUE97747.1;Parent=gene-NDY24_18540;Dbxref=NCBI_GP:UUE97747.1;Name=UUE97747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167589.1;locus_tag=NDY24_18540;product=Tat pathway signal protein;protein_id=UUE97747.1;transl_table=11 CP098602.1 Genbank gene 4263864 4266677 . + . ID=gene-NDY24_18545;Name=NDY24_18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18545 CP098602.1 Protein Homology CDS 4263864 4266677 . + 0 ID=cds-UUE97748.1;Parent=gene-NDY24_18545;Dbxref=NCBI_GP:UUE97748.1;Name=UUE97748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016944278.1;locus_tag=NDY24_18545;product=TonB-dependent receptor;protein_id=UUE97748.1;transl_table=11 CP098602.1 Genbank pseudogene 4266732 4271094 . + . ID=gene-NDY24_18550;Name=NDY24_18550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18550;pseudo=true CP098602.1 Protein Homology CDS 4266732 4271094 . + 0 ID=cds-NDY24_18550;Parent=gene-NDY24_18550;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154735.1;locus_tag=NDY24_18550;product=Ig-like domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4271091 4272709 . + . ID=gene-NDY24_18555;Name=NDY24_18555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18555;pseudo=true CP098602.1 Protein Homology CDS 4271091 4272709 . + 0 ID=cds-NDY24_18555;Parent=gene-NDY24_18555;Note=frameshifted;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920354.1;locus_tag=NDY24_18555;product=family 43 glycosylhydrolase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4272901 4275264 . + . ID=gene-NDY24_18560;Name=NDY24_18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18560 CP098602.1 Protein Homology CDS 4272901 4275264 . + 0 ID=cds-UUE97749.1;Parent=gene-NDY24_18560;Dbxref=NCBI_GP:UUE97749.1;Name=UUE97749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112183.1;locus_tag=NDY24_18560;product=S9 family peptidase;protein_id=UUE97749.1;transl_table=11 CP098602.1 Genbank gene 4275825 4278722 . + . ID=gene-NDY24_18565;Name=NDY24_18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18565 CP098602.1 Protein Homology CDS 4275825 4278722 . + 0 ID=cds-UUE97750.1;Parent=gene-NDY24_18565;Dbxref=NCBI_GP:UUE97750.1;Name=UUE97750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850071.1;locus_tag=NDY24_18565;product=TonB-dependent receptor;protein_id=UUE97750.1;transl_table=11 CP098602.1 Genbank gene 4278889 4281264 . + . ID=gene-NDY24_18570;Name=NDY24_18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18570 CP098602.1 Protein Homology CDS 4278889 4281264 . + 0 ID=cds-UUE97751.1;Parent=gene-NDY24_18570;Dbxref=NCBI_GP:UUE97751.1;Name=UUE97751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448827.1;locus_tag=NDY24_18570;product=glycoside hydrolase family 127 protein;protein_id=UUE97751.1;transl_table=11 CP098602.1 Genbank gene 4281466 4283370 . - . ID=gene-NDY24_18575;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=NDY24_18575 CP098602.1 Protein Homology CDS 4281466 4283370 . - 0 ID=cds-UUE97752.1;Parent=gene-NDY24_18575;Dbxref=NCBI_GP:UUE97752.1;Name=UUE97752.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302880.1;locus_tag=NDY24_18575;product=molecular chaperone HtpG;protein_id=UUE97752.1;transl_table=11 CP098602.1 Genbank gene 4283609 4284232 . + . ID=gene-NDY24_18580;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=NDY24_18580 CP098602.1 Protein Homology CDS 4283609 4284232 . + 0 ID=cds-UUE97753.1;Parent=gene-NDY24_18580;Dbxref=NCBI_GP:UUE97753.1;Name=UUE97753.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019768378.1;locus_tag=NDY24_18580;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=UUE97753.1;transl_table=11 CP098602.1 Genbank gene 4284229 4284735 . + . ID=gene-NDY24_18585;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=NDY24_18585 CP098602.1 Protein Homology CDS 4284229 4284735 . + 0 ID=cds-UUE97754.1;Parent=gene-NDY24_18585;Dbxref=NCBI_GP:UUE97754.1;Name=UUE97754.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372369.1;locus_tag=NDY24_18585;product=pantetheine-phosphate adenylyltransferase;protein_id=UUE97754.1;transl_table=11 CP098602.1 Genbank gene 4284783 4285280 . + . ID=gene-NDY24_18590;Name=NDY24_18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18590 CP098602.1 Protein Homology CDS 4284783 4285280 . + 0 ID=cds-UUE97755.1;Parent=gene-NDY24_18590;Dbxref=NCBI_GP:UUE97755.1;Name=UUE97755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157277.1;locus_tag=NDY24_18590;product=hypothetical protein;protein_id=UUE97755.1;transl_table=11 CP098602.1 Genbank gene 4285515 4285799 . + . ID=gene-NDY24_18595;Name=NDY24_18595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18595 CP098602.1 Protein Homology CDS 4285515 4285799 . + 0 ID=cds-UUE97756.1;Parent=gene-NDY24_18595;Dbxref=NCBI_GP:UUE97756.1;Name=UUE97756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502923.1;locus_tag=NDY24_18595;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=UUE97756.1;transl_table=11 CP098602.1 Genbank gene 4285796 4287574 . + . ID=gene-NDY24_18600;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=NDY24_18600 CP098602.1 Protein Homology CDS 4285796 4287574 . + 0 ID=cds-UUE97757.1;Parent=gene-NDY24_18600;Dbxref=NCBI_GP:UUE97757.1;Name=UUE97757.1;Ontology_term=GO:0006750;gbkey=CDS;gene=ggt;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157276.1;locus_tag=NDY24_18600;product=gamma-glutamyltransferase;protein_id=UUE97757.1;transl_table=11 CP098602.1 Genbank gene 4287644 4287721 . + . ID=gene-NDY24_18605;Name=NDY24_18605;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_18605 CP098602.1 cmsearch ncRNA 4287644 4287721 . + . ID=rna-NDY24_18605;Parent=gene-NDY24_18605;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_18605;product=sX9 sRNA CP098602.1 cmsearch exon 4287644 4287721 . + . ID=exon-NDY24_18605-1;Parent=rna-NDY24_18605;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_18605;product=sX9 sRNA CP098602.1 Genbank pseudogene 4287947 4289702 . + . ID=gene-NDY24_18610;Name=NDY24_18610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18610;pseudo=true CP098602.1 Protein Homology CDS 4287947 4289702 . + 0 ID=cds-NDY24_18610;Parent=gene-NDY24_18610;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917081.1;locus_tag=NDY24_18610;product=glycoside hydrolase family 9 protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4289909 4290541 . - . ID=gene-NDY24_18615;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=NDY24_18615 CP098602.1 Protein Homology CDS 4289909 4290541 . - 0 ID=cds-UUE97758.1;Parent=gene-NDY24_18615;Dbxref=NCBI_GP:UUE97758.1;Name=UUE97758.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116260.1;locus_tag=NDY24_18615;product=uracil phosphoribosyltransferase;protein_id=UUE97758.1;transl_table=11 CP098602.1 Genbank gene 4290693 4293251 . + . ID=gene-NDY24_18620;Name=NDY24_18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18620 CP098602.1 Protein Homology CDS 4290693 4293251 . + 0 ID=cds-UUE97759.1;Parent=gene-NDY24_18620;Dbxref=NCBI_GP:UUE97759.1;Name=UUE97759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502926.1;locus_tag=NDY24_18620;product=TonB-dependent receptor;protein_id=UUE97759.1;transl_table=11 CP098602.1 Genbank gene 4293248 4294384 . + . ID=gene-NDY24_18625;Name=NDY24_18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18625 CP098602.1 Protein Homology CDS 4293248 4294384 . + 0 ID=cds-UUE97760.1;Parent=gene-NDY24_18625;Dbxref=NCBI_GP:UUE97760.1;Name=UUE97760.1;Ontology_term=GO:0016158;gbkey=CDS;go_function=3-phytase activity|0016158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903287.1;locus_tag=NDY24_18625;product=phytase;protein_id=UUE97760.1;transl_table=11 CP098602.1 Genbank pseudogene 4294381 4295762 . + . ID=gene-NDY24_18630;Name=NDY24_18630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18630;pseudo=true CP098602.1 Protein Homology CDS 4294381 4295762 . + 0 ID=cds-NDY24_18630;Parent=gene-NDY24_18630;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051644.1;locus_tag=NDY24_18630;product=metallophosphoesterase family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4296005 4296712 . + . ID=gene-NDY24_18635;Name=NDY24_18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18635 CP098602.1 Protein Homology CDS 4296005 4296712 . + 0 ID=cds-UUE97761.1;Parent=gene-NDY24_18635;Dbxref=NCBI_GP:UUE97761.1;Name=UUE97761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157269.1;locus_tag=NDY24_18635;product=hypothetical protein;protein_id=UUE97761.1;transl_table=11 CP098602.1 Genbank gene 4296935 4298431 . - . ID=gene-NDY24_18640;Name=NDY24_18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18640 CP098602.1 Protein Homology CDS 4296935 4298431 . - 0 ID=cds-UUE97762.1;Parent=gene-NDY24_18640;Dbxref=NCBI_GP:UUE97762.1;Name=UUE97762.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438074.1;locus_tag=NDY24_18640;product=aminotransferase class III-fold pyridoxal phosphate-dependent enzyme;protein_id=UUE97762.1;transl_table=11 CP098602.1 Genbank gene 4298553 4298984 . + . ID=gene-NDY24_18645;Name=NDY24_18645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18645 CP098602.1 Protein Homology CDS 4298553 4298984 . + 0 ID=cds-UUE97763.1;Parent=gene-NDY24_18645;Dbxref=NCBI_GP:UUE97763.1;Name=UUE97763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489775.1;locus_tag=NDY24_18645;product=Lrp/AsnC family transcriptional regulator;protein_id=UUE97763.1;transl_table=11 CP098602.1 Genbank pseudogene 4299514 4300587 . + . ID=gene-NDY24_18650;Name=queA;gbkey=Gene;gene=queA;gene_biotype=pseudogene;locus_tag=NDY24_18650;pseudo=true CP098602.1 Protein Homology CDS 4299514 4300587 . + 0 ID=cds-NDY24_18650;Parent=gene-NDY24_18650;Note=frameshifted;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037521.1;locus_tag=NDY24_18650;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4300669 4301814 . + . ID=gene-NDY24_18655;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=NDY24_18655 CP098602.1 Protein Homology CDS 4300669 4301814 . + 0 ID=cds-UUE97764.1;Parent=gene-NDY24_18655;Dbxref=NCBI_GP:UUE97764.1;Name=UUE97764.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=queuine tRNA-ribosyltransferase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157264.1;locus_tag=NDY24_18655;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=UUE97764.1;transl_table=11 CP098602.1 Genbank gene 4301946 4302299 . + . ID=gene-NDY24_18660;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=NDY24_18660 CP098602.1 Protein Homology CDS 4301946 4302299 . + 0 ID=cds-UUE97765.1;Parent=gene-NDY24_18660;Dbxref=NCBI_GP:UUE97765.1;Name=UUE97765.1;Ontology_term=GO:0009306,GO:0015450,GO:0005887;gbkey=CDS;gene=yajC;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157263.1;locus_tag=NDY24_18660;product=preprotein translocase subunit YajC;protein_id=UUE97765.1;transl_table=11 CP098602.1 Genbank gene 4302491 4304335 . + . ID=gene-NDY24_18665;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=NDY24_18665 CP098602.1 Protein Homology CDS 4302491 4304335 . + 0 ID=cds-UUE97766.1;Parent=gene-NDY24_18665;Dbxref=NCBI_GP:UUE97766.1;Name=UUE97766.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917104.1;locus_tag=NDY24_18665;product=protein translocase subunit SecD;protein_id=UUE97766.1;transl_table=11 CP098602.1 Genbank gene 4304426 4305394 . + . ID=gene-NDY24_18670;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=NDY24_18670 CP098602.1 Protein Homology CDS 4304426 4305394 . + 0 ID=cds-UUE97767.1;Parent=gene-NDY24_18670;Dbxref=NCBI_GP:UUE97767.1;Name=UUE97767.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438079.1;locus_tag=NDY24_18670;product=protein translocase subunit SecF;protein_id=UUE97767.1;transl_table=11 CP098602.1 Genbank pseudogene 4305867 4306975 . - . ID=gene-NDY24_18675;Name=NDY24_18675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18675;pseudo=true CP098602.1 Protein Homology CDS 4305867 4306975 . - 0 ID=cds-NDY24_18675;Parent=gene-NDY24_18675;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611839.1;locus_tag=NDY24_18675;product=IS3 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4307023 4307721 . + . ID=gene-NDY24_18680;Name=NDY24_18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18680 CP098602.1 GeneMarkS-2+ CDS 4307023 4307721 . + 0 ID=cds-UUE97768.1;Parent=gene-NDY24_18680;Dbxref=NCBI_GP:UUE97768.1;Name=UUE97768.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_18680;product=hypothetical protein;protein_id=UUE97768.1;transl_table=11 CP098602.1 Genbank gene 4307789 4308247 . + . ID=gene-NDY24_18685;Name=NDY24_18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18685 CP098602.1 GeneMarkS-2+ CDS 4307789 4308247 . + 0 ID=cds-UUE97769.1;Parent=gene-NDY24_18685;Dbxref=NCBI_GP:UUE97769.1;Name=UUE97769.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_18685;product=hypothetical protein;protein_id=UUE97769.1;transl_table=11 CP098602.1 Genbank gene 4308357 4308581 . - . ID=gene-NDY24_18690;Name=NDY24_18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18690 CP098602.1 Protein Homology CDS 4308357 4308581 . - 0 ID=cds-UUE97770.1;Parent=gene-NDY24_18690;Dbxref=NCBI_GP:UUE97770.1;Name=UUE97770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451698.1;locus_tag=NDY24_18690;product=type I toxin-antitoxin system SymE family toxin;protein_id=UUE97770.1;transl_table=11 CP098602.1 Genbank gene 4309198 4309839 . + . ID=gene-NDY24_18695;Name=NDY24_18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18695 CP098602.1 Protein Homology CDS 4309198 4309839 . + 0 ID=cds-UUE97771.1;Parent=gene-NDY24_18695;Dbxref=NCBI_GP:UUE97771.1;Name=UUE97771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171929.1;locus_tag=NDY24_18695;product=DUF1629 domain-containing protein;protein_id=UUE97771.1;transl_table=11 CP098602.1 Genbank gene 4310126 4310767 . + . ID=gene-NDY24_18700;Name=NDY24_18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18700 CP098602.1 Protein Homology CDS 4310126 4310767 . + 0 ID=cds-UUF00475.1;Parent=gene-NDY24_18700;Dbxref=NCBI_GP:UUF00475.1;Name=UUF00475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964591.1;locus_tag=NDY24_18700;product=DUF1629 domain-containing protein;protein_id=UUF00475.1;transl_table=11 CP098602.1 Genbank pseudogene 4310800 4311009 . + . ID=gene-NDY24_18705;Name=NDY24_18705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18705;pseudo=true CP098602.1 Protein Homology CDS 4310800 4311009 . + 0 ID=cds-NDY24_18705;Parent=gene-NDY24_18705;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025769.2;locus_tag=NDY24_18705;product=AHH domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4314845 4315495 . + . ID=gene-NDY24_18710;Name=NDY24_18710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18710 CP098602.1 Protein Homology CDS 4314845 4315495 . + 0 ID=cds-UUF00476.1;Parent=gene-NDY24_18710;Dbxref=NCBI_GP:UUF00476.1;Name=UUF00476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154826.1;locus_tag=NDY24_18710;product=hypothetical protein;protein_id=UUF00476.1;transl_table=11 CP098602.1 Genbank gene 4315733 4317010 . - . ID=gene-NDY24_18715;Name=NDY24_18715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18715 CP098602.1 Protein Homology CDS 4315733 4317010 . - 0 ID=cds-UUE97772.1;Parent=gene-NDY24_18715;Dbxref=NCBI_GP:UUE97772.1;Name=UUE97772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237567.1;locus_tag=NDY24_18715;product=carbohydrate porin;protein_id=UUE97772.1;transl_table=11 CP098602.1 Genbank gene 4317196 4318938 . - . ID=gene-NDY24_18720;Name=NDY24_18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18720 CP098602.1 Protein Homology CDS 4317196 4318938 . - 0 ID=cds-UUE97773.1;Parent=gene-NDY24_18720;Dbxref=NCBI_GP:UUE97773.1;Name=UUE97773.1;Ontology_term=GO:0009401,GO:0022877,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993427.1;locus_tag=NDY24_18720;product=fructose-specific PTS transporter subunit EIIC;protein_id=UUE97773.1;transl_table=11 CP098602.1 Genbank gene 4319088 4320044 . - . ID=gene-NDY24_18725;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=NDY24_18725 CP098602.1 Protein Homology CDS 4319088 4320044 . - 0 ID=cds-UUE97774.1;Parent=gene-NDY24_18725;Dbxref=NCBI_GP:UUE97774.1;Name=UUE97774.1;Ontology_term=GO:0008662;gbkey=CDS;gene=pfkB;go_function=1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007969646.1;locus_tag=NDY24_18725;product=1-phosphofructokinase;protein_id=UUE97774.1;transl_table=11 CP098602.1 Genbank gene 4320041 4322560 . - . ID=gene-NDY24_18730;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=NDY24_18730 CP098602.1 Protein Homology CDS 4320041 4322560 . - 0 ID=cds-UUE97775.1;Parent=gene-NDY24_18730;Dbxref=NCBI_GP:UUE97775.1;Name=UUE97775.1;Ontology_term=GO:0006808,GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=regulation of nitrogen utilization|0006808||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051629.1;locus_tag=NDY24_18730;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=UUE97775.1;transl_table=11 CP098602.1 Genbank gene 4322724 4323713 . + . ID=gene-NDY24_18735;Name=NDY24_18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18735 CP098602.1 Protein Homology CDS 4322724 4323713 . + 0 ID=cds-UUE97776.1;Parent=gene-NDY24_18735;Dbxref=NCBI_GP:UUE97776.1;Name=UUE97776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037512.1;locus_tag=NDY24_18735;product=LacI family transcriptional regulator;protein_id=UUE97776.1;transl_table=11 CP098602.1 Genbank gene 4324029 4327199 . - . ID=gene-NDY24_18740;Name=NDY24_18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18740 CP098602.1 Protein Homology CDS 4324029 4327199 . - 0 ID=cds-UUE97777.1;Parent=gene-NDY24_18740;Dbxref=NCBI_GP:UUE97777.1;Name=UUE97777.1;Ontology_term=GO:0042908,GO:0055085,GO:0015562,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005997967.1;locus_tag=NDY24_18740;product=multidrug efflux RND transporter permease subunit;protein_id=UUE97777.1;transl_table=11 CP098602.1 Genbank pseudogene 4327212 4328517 . - . ID=gene-NDY24_18745;Name=NDY24_18745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18745;pseudo=true CP098602.1 Protein Homology CDS 4327212 4328517 . - 0 ID=cds-NDY24_18745;Parent=gene-NDY24_18745;Note=frameshifted;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171867.1;locus_tag=NDY24_18745;product=efflux RND transporter periplasmic adaptor subunit;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4328532 4329191 . - . ID=gene-NDY24_18750;Name=NDY24_18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18750 CP098602.1 Protein Homology CDS 4328532 4329191 . - 0 ID=cds-UUE97778.1;Parent=gene-NDY24_18750;Dbxref=NCBI_GP:UUE97778.1;Name=UUE97778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917360.1;locus_tag=NDY24_18750;product=TetR/AcrR family transcriptional regulator;protein_id=UUE97778.1;transl_table=11 CP098602.1 Genbank gene 4329480 4334489 . + . ID=gene-NDY24_18755;Name=NDY24_18755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18755 CP098602.1 Protein Homology CDS 4329480 4334489 . + 0 ID=cds-UUE97779.1;Parent=gene-NDY24_18755;Dbxref=NCBI_GP:UUE97779.1;Name=UUE97779.1;Ontology_term=GO:0019551,GO:0004352;gbkey=CDS;go_function=glutamate dehydrogenase (NAD+) activity|0004352||IEA;go_process=glutamate catabolic process to 2-oxoglutarate|0019551||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051626.1;locus_tag=NDY24_18755;product=NAD-glutamate dehydrogenase;protein_id=UUE97779.1;transl_table=11 CP098602.1 Genbank gene 4335181 4336182 . - . ID=gene-NDY24_18760;Name=NDY24_18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18760 CP098602.1 Protein Homology CDS 4335181 4336182 . - 0 ID=cds-UUE97780.1;Parent=gene-NDY24_18760;Dbxref=NCBI_GP:UUE97780.1;Name=UUE97780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449722.1;locus_tag=NDY24_18760;product=NADP-dependent oxidoreductase;protein_id=UUE97780.1;transl_table=11 CP098602.1 Genbank gene 4336415 4337203 . - . ID=gene-NDY24_18765;Name=NDY24_18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18765 CP098602.1 Protein Homology CDS 4336415 4337203 . - 0 ID=cds-UUE97781.1;Parent=gene-NDY24_18765;Dbxref=NCBI_GP:UUE97781.1;Name=UUE97781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449721.1;locus_tag=NDY24_18765;product=SDR family oxidoreductase;protein_id=UUE97781.1;transl_table=11 CP098602.1 Genbank gene 4337254 4338336 . - . ID=gene-NDY24_18770;Name=NDY24_18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18770 CP098602.1 Protein Homology CDS 4337254 4338336 . - 0 ID=cds-UUE97782.1;Parent=gene-NDY24_18770;Dbxref=NCBI_GP:UUE97782.1;Name=UUE97782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904437.1;locus_tag=NDY24_18770;product=alkene reductase;protein_id=UUE97782.1;transl_table=11 CP098602.1 Genbank gene 4338469 4339044 . + . ID=gene-NDY24_18775;Name=NDY24_18775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18775 CP098602.1 Protein Homology CDS 4338469 4339044 . + 0 ID=cds-UUE97783.1;Parent=gene-NDY24_18775;Dbxref=NCBI_GP:UUE97783.1;Name=UUE97783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449719.1;locus_tag=NDY24_18775;product=TetR/AcrR family transcriptional regulator;protein_id=UUE97783.1;transl_table=11 CP098602.1 Genbank gene 4339143 4339997 . + . ID=gene-NDY24_18780;Name=NDY24_18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18780 CP098602.1 Protein Homology CDS 4339143 4339997 . + 0 ID=cds-UUE97784.1;Parent=gene-NDY24_18780;Dbxref=NCBI_GP:UUE97784.1;Name=UUE97784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449718.1;locus_tag=NDY24_18780;product=oxidoreductase;protein_id=UUE97784.1;transl_table=11 CP098602.1 Genbank gene 4340109 4341095 . + . ID=gene-NDY24_18785;Name=NDY24_18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18785 CP098602.1 Protein Homology CDS 4340109 4341095 . + 0 ID=cds-UUE97785.1;Parent=gene-NDY24_18785;Dbxref=NCBI_GP:UUE97785.1;Name=UUE97785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660308.1;locus_tag=NDY24_18785;product=oxidoreductase;protein_id=UUE97785.1;transl_table=11 CP098602.1 Genbank gene 4341092 4341514 . + . ID=gene-NDY24_18790;Name=NDY24_18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18790 CP098602.1 Protein Homology CDS 4341092 4341514 . + 0 ID=cds-UUE97786.1;Parent=gene-NDY24_18790;Dbxref=NCBI_GP:UUE97786.1;Name=UUE97786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449716.1;locus_tag=NDY24_18790;product=hypothetical protein;protein_id=UUE97786.1;transl_table=11 CP098602.1 Genbank gene 4341575 4343005 . - . ID=gene-NDY24_18795;Name=NDY24_18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18795 CP098602.1 Protein Homology CDS 4341575 4343005 . - 0 ID=cds-UUE97787.1;Parent=gene-NDY24_18795;Dbxref=NCBI_GP:UUE97787.1;Name=UUE97787.1;Ontology_term=GO:0006855,GO:0009410,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922949.1;locus_tag=NDY24_18795;product=DHA2 family efflux MFS transporter permease subunit;protein_id=UUE97787.1;transl_table=11 CP098602.1 Genbank gene 4343426 4344418 . - . ID=gene-NDY24_18800;Name=NDY24_18800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18800 CP098602.1 Protein Homology CDS 4343426 4344418 . - 0 ID=cds-UUE97788.1;Parent=gene-NDY24_18800;Dbxref=NCBI_GP:UUE97788.1;Name=UUE97788.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156204.1;locus_tag=NDY24_18800;product=response regulator;protein_id=UUE97788.1;transl_table=11 CP098602.1 Genbank gene 4344452 4348546 . - . ID=gene-NDY24_18805;Name=NDY24_18805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18805 CP098602.1 Protein Homology CDS 4344452 4348546 . - 0 ID=cds-UUE97789.1;Parent=gene-NDY24_18805;Dbxref=NCBI_GP:UUE97789.1;Name=UUE97789.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037503.1;locus_tag=NDY24_18805;product=response regulator;protein_id=UUE97789.1;transl_table=11 CP098602.1 Genbank gene 4348754 4350058 . - . ID=gene-NDY24_18810;Name=NDY24_18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18810 CP098602.1 Protein Homology CDS 4348754 4350058 . - 0 ID=cds-UUE97790.1;Parent=gene-NDY24_18810;Dbxref=NCBI_GP:UUE97790.1;Name=UUE97790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408789.1;locus_tag=NDY24_18810;product=DUF445 family protein;protein_id=UUE97790.1;transl_table=11 CP098602.1 Genbank gene 4350224 4351078 . - . ID=gene-NDY24_18815;Name=NDY24_18815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18815 CP098602.1 Protein Homology CDS 4350224 4351078 . - 0 ID=cds-UUE97791.1;Parent=gene-NDY24_18815;Dbxref=NCBI_GP:UUE97791.1;Name=UUE97791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915330.1;locus_tag=NDY24_18815;product=plasmid replication/partition related protein;protein_id=UUE97791.1;transl_table=11 CP098602.1 Genbank gene 4351244 4353442 . + . ID=gene-NDY24_18820;Name=NDY24_18820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18820 CP098602.1 GeneMarkS-2+ CDS 4351244 4353442 . + 0 ID=cds-UUE97792.1;Parent=gene-NDY24_18820;Dbxref=NCBI_GP:UUE97792.1;Name=UUE97792.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_18820;product=hypothetical protein;protein_id=UUE97792.1;transl_table=11 CP098602.1 Genbank gene 4353375 4353938 . + . ID=gene-NDY24_18825;Name=NDY24_18825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18825 CP098602.1 Protein Homology CDS 4353375 4353938 . + 0 ID=cds-UUE97793.1;Parent=gene-NDY24_18825;Dbxref=NCBI_GP:UUE97793.1;Name=UUE97793.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024486.2;locus_tag=NDY24_18825;product=hypothetical protein;protein_id=UUE97793.1;transl_table=11 CP098602.1 Genbank gene 4353976 4354371 . + . ID=gene-NDY24_18830;Name=NDY24_18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18830 CP098602.1 Protein Homology CDS 4353976 4354371 . + 0 ID=cds-UUE97794.1;Parent=gene-NDY24_18830;Dbxref=NCBI_GP:UUE97794.1;Name=UUE97794.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024487.2;locus_tag=NDY24_18830;product=AAA domain-containing protein;protein_id=UUE97794.1;transl_table=11 CP098602.1 Genbank gene 4354432 4355796 . - . ID=gene-NDY24_18835;Name=NDY24_18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18835 CP098602.1 Protein Homology CDS 4354432 4355796 . - 0 ID=cds-UUE97795.1;Parent=gene-NDY24_18835;Dbxref=NCBI_GP:UUE97795.1;Name=UUE97795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571353.1;locus_tag=NDY24_18835;product=aspartate aminotransferase family protein;protein_id=UUE97795.1;transl_table=11 CP098602.1 Genbank gene 4356193 4357869 . + . ID=gene-NDY24_18840;Name=NDY24_18840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18840 CP098602.1 Protein Homology CDS 4356193 4357869 . + 0 ID=cds-UUE97796.1;Parent=gene-NDY24_18840;Dbxref=NCBI_GP:UUE97796.1;Name=UUE97796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915324.1;locus_tag=NDY24_18840;product=OFA family MFS transporter;protein_id=UUE97796.1;transl_table=11 CP098602.1 Genbank gene 4357876 4358721 . + . ID=gene-NDY24_18845;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=NDY24_18845 CP098602.1 Protein Homology CDS 4357876 4358721 . + 0 ID=cds-UUE97797.1;Parent=gene-NDY24_18845;Dbxref=NCBI_GP:UUE97797.1;Name=UUE97797.1;Ontology_term=GO:0009061,GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156198.1;locus_tag=NDY24_18845;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=UUE97797.1;transl_table=11 CP098602.1 Genbank gene 4358718 4361066 . + . ID=gene-NDY24_18850;Name=NDY24_18850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18850 CP098602.1 Protein Homology CDS 4358718 4361066 . + 0 ID=cds-UUE97798.1;Parent=gene-NDY24_18850;Dbxref=NCBI_GP:UUE97798.1;Name=UUE97798.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915320.1;locus_tag=NDY24_18850;product=FdhF/YdeP family oxidoreductase;protein_id=UUE97798.1;transl_table=11 CP098602.1 Genbank gene 4361056 4361334 . + . ID=gene-NDY24_18855;Name=NDY24_18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18855 CP098602.1 Protein Homology CDS 4361056 4361334 . + 0 ID=cds-UUE97799.1;Parent=gene-NDY24_18855;Dbxref=NCBI_GP:UUE97799.1;Name=UUE97799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449705.1;locus_tag=NDY24_18855;product=hypothetical protein;protein_id=UUE97799.1;transl_table=11 CP098602.1 Genbank gene 4362711 4364018 . + . ID=gene-NDY24_18860;Name=NDY24_18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18860 CP098602.1 Protein Homology CDS 4362711 4364018 . + 0 ID=cds-UUE97800.1;Parent=gene-NDY24_18860;Dbxref=NCBI_GP:UUE97800.1;Name=UUE97800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450891.1;locus_tag=NDY24_18860;product=MHS family MFS transporter;protein_id=UUE97800.1;transl_table=11 CP098602.1 Genbank gene 4364105 4365403 . - . ID=gene-NDY24_18865;Name=NDY24_18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18865 CP098602.1 Protein Homology CDS 4364105 4365403 . - 0 ID=cds-UUE97801.1;Parent=gene-NDY24_18865;Dbxref=NCBI_GP:UUE97801.1;Name=UUE97801.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237577.1;locus_tag=NDY24_18865;product=diguanylate cyclase;protein_id=UUE97801.1;transl_table=11 CP098602.1 Genbank gene 4365953 4367269 . - . ID=gene-NDY24_18870;Name=NDY24_18870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18870 CP098602.1 Protein Homology CDS 4365953 4367269 . - 0 ID=cds-UUE97802.1;Parent=gene-NDY24_18870;Dbxref=NCBI_GP:UUE97802.1;Name=UUE97802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453118.1;locus_tag=NDY24_18870;product=FAD-binding oxidoreductase;protein_id=UUE97802.1;transl_table=11 CP098602.1 Genbank gene 4367269 4368648 . - . ID=gene-NDY24_18875;Name=NDY24_18875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18875 CP098602.1 Protein Homology CDS 4367269 4368648 . - 0 ID=cds-UUE97803.1;Parent=gene-NDY24_18875;Dbxref=NCBI_GP:UUE97803.1;Name=UUE97803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347795.1;locus_tag=NDY24_18875;product=glutamine synthetase family protein;protein_id=UUE97803.1;transl_table=11 CP098602.1 Genbank gene 4368811 4369566 . + . ID=gene-NDY24_18880;Name=NDY24_18880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18880 CP098602.1 Protein Homology CDS 4368811 4369566 . + 0 ID=cds-UUE97804.1;Parent=gene-NDY24_18880;Dbxref=NCBI_GP:UUE97804.1;Name=UUE97804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488313.1;locus_tag=NDY24_18880;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=UUE97804.1;transl_table=11 CP098602.1 Genbank gene 4369573 4370958 . + . ID=gene-NDY24_18885;Name=NDY24_18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18885 CP098602.1 Protein Homology CDS 4369573 4370958 . + 0 ID=cds-UUE97805.1;Parent=gene-NDY24_18885;Dbxref=NCBI_GP:UUE97805.1;Name=UUE97805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508026.1;locus_tag=NDY24_18885;product=glutamine synthetase family protein;protein_id=UUE97805.1;transl_table=11 CP098602.1 Genbank gene 4371190 4372557 . + . ID=gene-NDY24_18890;Name=NDY24_18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18890 CP098602.1 Protein Homology CDS 4371190 4372557 . + 0 ID=cds-UUE97806.1;Parent=gene-NDY24_18890;Dbxref=NCBI_GP:UUE97806.1;Name=UUE97806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162669.1;locus_tag=NDY24_18890;product=aspartate aminotransferase family protein;protein_id=UUE97806.1;transl_table=11 CP098602.1 Genbank gene 4372797 4373912 . + . ID=gene-NDY24_18895;Name=NDY24_18895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18895 CP098602.1 Protein Homology CDS 4372797 4373912 . + 0 ID=cds-UUE97807.1;Parent=gene-NDY24_18895;Dbxref=NCBI_GP:UUE97807.1;Name=UUE97807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305095.1;locus_tag=NDY24_18895;product=polyamine ABC transporter substrate-binding protein;protein_id=UUE97807.1;transl_table=11 CP098602.1 Genbank gene 4374110 4375312 . + . ID=gene-NDY24_18900;Name=NDY24_18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18900 CP098602.1 Protein Homology CDS 4374110 4375312 . + 0 ID=cds-UUE97808.1;Parent=gene-NDY24_18900;Dbxref=NCBI_GP:UUE97808.1;Name=UUE97808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159217.1;locus_tag=NDY24_18900;product=HlyD family secretion protein;protein_id=UUE97808.1;transl_table=11 CP098602.1 Genbank gene 4375309 4376895 . + . ID=gene-NDY24_18905;Name=NDY24_18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18905 CP098602.1 Protein Homology CDS 4375309 4376895 . + 0 ID=cds-UUE97809.1;Parent=gene-NDY24_18905;Dbxref=NCBI_GP:UUE97809.1;Name=UUE97809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302223.1;locus_tag=NDY24_18905;product=multidrug efflux MFS transporter;protein_id=UUE97809.1;transl_table=11 CP098602.1 Genbank pseudogene 4376900 4378390 . + . ID=gene-NDY24_18910;Name=NDY24_18910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18910;pseudo=true CP098602.1 Protein Homology CDS 4376900 4378390 . + 0 ID=cds-NDY24_18910;Parent=gene-NDY24_18910;Note=internal stop;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156183.1;locus_tag=NDY24_18910;product=efflux transporter outer membrane subunit;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4378500 4379626 . + . ID=gene-NDY24_18915;Name=potA;gbkey=Gene;gene=potA;gene_biotype=pseudogene;locus_tag=NDY24_18915;pseudo=true CP098602.1 Protein Homology CDS 4378500 4379626 . + 0 ID=cds-NDY24_18915;Parent=gene-NDY24_18915;Note=frameshifted;Ontology_term=GO:0015846,GO:0005524,GO:0015417,GO:0009898,GO:0055052;gbkey=CDS;gene=potA;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449560.1;locus_tag=NDY24_18915;product=polyamine ABC transporter ATP-binding protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4379678 4379752 . + . ID=gene-NDY24_18920;Name=NDY24_18920;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_18920 CP098602.1 cmsearch ncRNA 4379678 4379752 . + . ID=rna-NDY24_18920;Parent=gene-NDY24_18920;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_18920;product=sX9 sRNA CP098602.1 cmsearch exon 4379678 4379752 . + . ID=exon-NDY24_18920-1;Parent=rna-NDY24_18920;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_18920;product=sX9 sRNA CP098602.1 Genbank pseudogene 4379789 4380656 . + . ID=gene-NDY24_18925;Name=NDY24_18925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18925;pseudo=true CP098602.1 Protein Homology CDS 4379789 4380656 . + 0 ID=cds-NDY24_18925;Parent=gene-NDY24_18925;Note=frameshifted;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237581.1;locus_tag=NDY24_18925;product=ABC transporter permease subunit;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4380653 4381501 . + . ID=gene-NDY24_18930;Name=NDY24_18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18930 CP098602.1 Protein Homology CDS 4380653 4381501 . + 0 ID=cds-UUE97810.1;Parent=gene-NDY24_18930;Dbxref=NCBI_GP:UUE97810.1;Name=UUE97810.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449558.1;locus_tag=NDY24_18930;product=ABC transporter permease subunit;protein_id=UUE97810.1;transl_table=11 CP098602.1 Genbank gene 4381641 4382036 . - . ID=gene-NDY24_18935;Name=NDY24_18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18935 CP098602.1 Protein Homology CDS 4381641 4382036 . - 0 ID=cds-UUE97811.1;Parent=gene-NDY24_18935;Dbxref=NCBI_GP:UUE97811.1;Name=UUE97811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449557.1;locus_tag=NDY24_18935;product=hypothetical protein;protein_id=UUE97811.1;transl_table=11 CP098602.1 Genbank gene 4382105 4382317 . - . ID=gene-NDY24_18940;Name=NDY24_18940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18940 CP098602.1 GeneMarkS-2+ CDS 4382105 4382317 . - 0 ID=cds-UUE97812.1;Parent=gene-NDY24_18940;Dbxref=NCBI_GP:UUE97812.1;Name=UUE97812.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_18940;product=hypothetical protein;protein_id=UUE97812.1;transl_table=11 CP098602.1 Genbank gene 4382316 4383707 . + . ID=gene-NDY24_18945;Name=NDY24_18945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18945 CP098602.1 Protein Homology CDS 4382316 4383707 . + 0 ID=cds-UUE97813.1;Parent=gene-NDY24_18945;Dbxref=NCBI_GP:UUE97813.1;Name=UUE97813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571330.1;locus_tag=NDY24_18945;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=UUE97813.1;transl_table=11 CP098602.1 Genbank gene 4383911 4384912 . - . ID=gene-NDY24_18950;Name=NDY24_18950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18950 CP098602.1 Protein Homology CDS 4383911 4384912 . - 0 ID=cds-UUE97814.1;Parent=gene-NDY24_18950;Dbxref=NCBI_GP:UUE97814.1;Name=UUE97814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488333.1;locus_tag=NDY24_18950;product=magnesium and cobalt transport protein CorA;protein_id=UUE97814.1;transl_table=11 CP098602.1 Genbank pseudogene 4384927 4386103 . - . ID=gene-NDY24_18955;Name=NDY24_18955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18955;pseudo=true CP098602.1 Protein Homology CDS 4384927 4386103 . - 0 ID=cds-NDY24_18955;Parent=gene-NDY24_18955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449554.1;locus_tag=NDY24_18955;product=DUF4105 domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4386184 4387062 . - . ID=gene-NDY24_18960;Name=NDY24_18960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18960 CP098602.1 Protein Homology CDS 4386184 4387062 . - 0 ID=cds-UUE97815.1;Parent=gene-NDY24_18960;Dbxref=NCBI_GP:UUE97815.1;Name=UUE97815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488337.1;locus_tag=NDY24_18960;product=CBS domain-containing protein;protein_id=UUE97815.1;transl_table=11 CP098602.1 Genbank gene 4387159 4387677 . - . ID=gene-NDY24_18965;Name=NDY24_18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18965 CP098602.1 Protein Homology CDS 4387159 4387677 . - 0 ID=cds-UUE97816.1;Parent=gene-NDY24_18965;Dbxref=NCBI_GP:UUE97816.1;Name=UUE97816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347782.1;locus_tag=NDY24_18965;product=hypothetical protein;protein_id=UUE97816.1;transl_table=11 CP098602.1 Genbank gene 4387677 4388162 . - . ID=gene-NDY24_18970;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=NDY24_18970 CP098602.1 Protein Homology CDS 4387677 4388162 . - 0 ID=cds-UUE97817.1;Parent=gene-NDY24_18970;Dbxref=NCBI_GP:UUE97817.1;Name=UUE97817.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449551.1;locus_tag=NDY24_18970;product=rRNA maturation RNase YbeY;protein_id=UUE97817.1;transl_table=11 CP098602.1 Genbank pseudogene 4388418 4389371 . - . ID=gene-NDY24_18975;Name=NDY24_18975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18975;pseudo=true CP098602.1 Protein Homology CDS 4388418 4389371 . - 0 ID=cds-NDY24_18975;Parent=gene-NDY24_18975;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174255.1;locus_tag=NDY24_18975;product=PhoH family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4389903 4391372 . - . ID=gene-NDY24_18980;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=NDY24_18980 CP098602.1 Protein Homology CDS 4389903 4391372 . - 0 ID=cds-UUE97818.1;Parent=gene-NDY24_18980;Dbxref=NCBI_GP:UUE97818.1;Name=UUE97818.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372574.1;locus_tag=NDY24_18980;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=UUE97818.1;transl_table=11 CP098602.1 Genbank gene 4391442 4392056 . - . ID=gene-NDY24_18985;Name=NDY24_18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_18985 CP098602.1 Protein Homology CDS 4391442 4392056 . - 0 ID=cds-UUE97819.1;Parent=gene-NDY24_18985;Dbxref=NCBI_GP:UUE97819.1;Name=UUE97819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449547.1;locus_tag=NDY24_18985;product=glutathione S-transferase family protein;protein_id=UUE97819.1;transl_table=11 CP098602.1 Genbank pseudogene 4392176 4392568 . + . ID=gene-NDY24_18990;Name=NDY24_18990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18990;pseudo=true CP098602.1 Protein Homology CDS 4392176 4392568 . + 0 ID=cds-NDY24_18990;Parent=gene-NDY24_18990;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156170.1;locus_tag=NDY24_18990;product=HTH domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4392687 4393676 . + . ID=gene-NDY24_18995;Name=NDY24_18995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_18995;pseudo=true CP098602.1 Protein Homology CDS 4392687 4393676 . + 0 ID=cds-NDY24_18995;Parent=gene-NDY24_18995;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171389.1;locus_tag=NDY24_18995;product=transglycosylase SLT domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4393857 4394501 . + . ID=gene-NDY24_19000;Name=petA;gbkey=Gene;gene=petA;gene_biotype=protein_coding;locus_tag=NDY24_19000 CP098602.1 Protein Homology CDS 4393857 4394501 . + 0 ID=cds-UUE97820.1;Parent=gene-NDY24_19000;Dbxref=NCBI_GP:UUE97820.1;Name=UUE97820.1;Ontology_term=GO:0009060,GO:0008121,GO:0009055,GO:0045275;gbkey=CDS;gene=petA;go_component=respiratory chain complex III|0045275||IEA;go_function=ubiquinol-cytochrome-c reductase activity|0008121||IEA,electron transfer activity|0009055||IEA;go_process=aerobic respiration|0009060||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010382428.1;locus_tag=NDY24_19000;product=ubiquinol-cytochrome c reductase iron-sulfur subunit;protein_id=UUE97820.1;transl_table=11 CP098602.1 Genbank gene 4394501 4395760 . + . ID=gene-NDY24_19005;Name=NDY24_19005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19005 CP098602.1 Protein Homology CDS 4394501 4395760 . + 0 ID=cds-UUE97821.1;Parent=gene-NDY24_19005;Dbxref=NCBI_GP:UUE97821.1;Name=UUE97821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965674.1;locus_tag=NDY24_19005;product=cytochrome bc complex cytochrome b subunit;protein_id=UUE97821.1;transl_table=11 CP098602.1 Genbank pseudogene 4395753 4396512 . + . ID=gene-NDY24_19010;Name=NDY24_19010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_19010;pseudo=true CP098602.1 Protein Homology CDS 4395753 4396512 . + 0 ID=cds-NDY24_19010;Parent=gene-NDY24_19010;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009598114.1;locus_tag=NDY24_19010;product=cytochrome c1;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4397238 4397873 . + . ID=gene-NDY24_19015;Name=NDY24_19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19015 CP098602.1 Protein Homology CDS 4397238 4397873 . + 0 ID=cds-UUE97822.1;Parent=gene-NDY24_19015;Dbxref=NCBI_GP:UUE97822.1;Name=UUE97822.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810483.1;locus_tag=NDY24_19015;product=glutathione S-transferase N-terminal domain-containing protein;protein_id=UUE97822.1;transl_table=11 CP098602.1 Genbank gene 4397952 4398395 . + . ID=gene-NDY24_19020;Name=NDY24_19020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19020 CP098602.1 Protein Homology CDS 4397952 4398395 . + 0 ID=cds-UUE97823.1;Parent=gene-NDY24_19020;Dbxref=NCBI_GP:UUE97823.1;Name=UUE97823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901612.1;locus_tag=NDY24_19020;product=ClpXP protease specificity-enhancing factor;protein_id=UUE97823.1;transl_table=11 CP098602.1 Genbank pseudogene 4398647 4399028 . - . ID=gene-NDY24_19025;Name=NDY24_19025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_19025;pseudo=true CP098602.1 Protein Homology CDS 4398647 4399028 . - 0 ID=cds-NDY24_19025;Parent=gene-NDY24_19025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571309.1;locus_tag=NDY24_19025;product=DUF3301 domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4399422 4403891 . + . ID=gene-NDY24_19030;Name=NDY24_19030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_19030;pseudo=true CP098602.1 Protein Homology CDS 4399422 4403891 . + 0 ID=cds-NDY24_19030;Parent=gene-NDY24_19030;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463325.1;locus_tag=NDY24_19030;product=DEAD/DEAH box helicase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4403863 4404174 . - . ID=gene-NDY24_19035;Name=NDY24_19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19035 CP098602.1 Protein Homology CDS 4403863 4404174 . - 0 ID=cds-UUE97824.1;Parent=gene-NDY24_19035;Dbxref=NCBI_GP:UUE97824.1;Name=UUE97824.1;Ontology_term=GO:0006284,GO:0003677,GO:0003905;gbkey=CDS;go_function=DNA binding|0003677||IEA,alkylbase DNA N-glycosylase activity|0003905||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: protein motif:HMM:NF014316.2;locus_tag=NDY24_19035;product=DNA-3-methyladenine glycosylase;protein_id=UUE97824.1;transl_table=11 CP098602.1 Genbank gene 4404110 4404457 . - . ID=gene-NDY24_19040;Name=NDY24_19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19040 CP098602.1 Protein Homology CDS 4404110 4404457 . - 0 ID=cds-UUF00477.1;Parent=gene-NDY24_19040;Dbxref=NCBI_GP:UUF00477.1;Name=UUF00477.1;Ontology_term=GO:0006284,GO:0003677,GO:0003905;gbkey=CDS;go_function=DNA binding|0003677||IEA,alkylbase DNA N-glycosylase activity|0003905||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: protein motif:HMM:NF014316.2;locus_tag=NDY24_19040;product=DNA-3-methyladenine glycosylase;protein_id=UUF00477.1;transl_table=11 CP098602.1 Genbank pseudogene 4404776 4406435 . + . ID=gene-NDY24_19045;Name=NDY24_19045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_19045;pseudo=true CP098602.1 Protein Homology CDS 4404776 4406435 . + 0 ID=cds-NDY24_19045;Parent=gene-NDY24_19045;Note=frameshifted;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037458.1;locus_tag=NDY24_19045;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4406447 4406956 . + . ID=gene-NDY24_19050;Name=NDY24_19050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19050 CP098602.1 Protein Homology CDS 4406447 4406956 . + 0 ID=cds-UUE97825.1;Parent=gene-NDY24_19050;Dbxref=NCBI_GP:UUE97825.1;Name=UUE97825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576110.1;locus_tag=NDY24_19050;product=chemotaxis protein CheW;protein_id=UUE97825.1;transl_table=11 CP098602.1 Genbank gene 4407009 4408094 . - . ID=gene-NDY24_19055;Name=NDY24_19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19055 CP098602.1 Protein Homology CDS 4407009 4408094 . - 0 ID=cds-UUE97826.1;Parent=gene-NDY24_19055;Dbxref=NCBI_GP:UUE97826.1;Name=UUE97826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303972.1;locus_tag=NDY24_19055;product=sensor domain-containing diguanylate cyclase;protein_id=UUE97826.1;transl_table=11 CP098602.1 Genbank gene 4408280 4408354 . - . ID=gene-NDY24_19060;Name=NDY24_19060;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_19060 CP098602.1 cmsearch ncRNA 4408280 4408354 . - . ID=rna-NDY24_19060;Parent=gene-NDY24_19060;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_19060;product=sX9 sRNA CP098602.1 cmsearch exon 4408280 4408354 . - . ID=exon-NDY24_19060-1;Parent=rna-NDY24_19060;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_19060;product=sX9 sRNA CP098602.1 Genbank gene 4408447 4408653 . + . ID=gene-NDY24_19065;Name=NDY24_19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19065 CP098602.1 GeneMarkS-2+ CDS 4408447 4408653 . + 0 ID=cds-UUF00525.1;Parent=gene-NDY24_19065;Dbxref=NCBI_GP:UUF00525.1;Name=UUF00525.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_19065;product=hypothetical protein;protein_id=UUF00525.1;transl_table=11 CP098602.1 Genbank gene 4408827 4408902 . - . ID=gene-NDY24_19070;Name=NDY24_19070;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_19070 CP098602.1 tRNAscan-SE tRNA 4408827 4408902 . - . ID=rna-NDY24_19070;Parent=gene-NDY24_19070;anticodon=(pos:complement(4408867..4408869));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_19070;product=tRNA-Ala CP098602.1 tRNAscan-SE exon 4408827 4408902 . - . ID=exon-NDY24_19070-1;Parent=rna-NDY24_19070;anticodon=(pos:complement(4408867..4408869));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_19070;product=tRNA-Ala CP098602.1 Genbank gene 4409008 4409409 . - . ID=gene-NDY24_19075;Name=NDY24_19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19075 CP098602.1 Protein Homology CDS 4409008 4409409 . - 0 ID=cds-UUE97827.1;Parent=gene-NDY24_19075;Dbxref=NCBI_GP:UUE97827.1;Name=UUE97827.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485983.1;locus_tag=NDY24_19075;product=H-NS histone family protein;protein_id=UUE97827.1;transl_table=11 CP098602.1 Genbank gene 4409645 4410739 . - . ID=gene-NDY24_19080;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=NDY24_19080 CP098602.1 Protein Homology CDS 4409645 4410739 . - 0 ID=cds-UUE97828.1;Parent=gene-NDY24_19080;Dbxref=NCBI_GP:UUE97828.1;Name=UUE97828.1;Ontology_term=GO:0006396,GO:0016891;gbkey=CDS;gene=rnd;go_function=endoribonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453237.1;locus_tag=NDY24_19080;product=ribonuclease D;protein_id=UUE97828.1;transl_table=11 CP098602.1 Genbank gene 4410858 4412702 . + . ID=gene-NDY24_19085;Name=NDY24_19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19085 CP098602.1 Protein Homology CDS 4410858 4412702 . + 0 ID=cds-UUE97829.1;Parent=gene-NDY24_19085;Dbxref=NCBI_GP:UUE97829.1;Name=UUE97829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507985.1;locus_tag=NDY24_19085;product=formylglycine-generating enzyme family protein;protein_id=UUE97829.1;transl_table=11 CP098602.1 Genbank gene 4412964 4414217 . + . ID=gene-NDY24_19090;Name=NDY24_19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19090 CP098602.1 Protein Homology CDS 4412964 4414217 . + 0 ID=cds-UUE97830.1;Parent=gene-NDY24_19090;Dbxref=NCBI_GP:UUE97830.1;Name=UUE97830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453235.1;locus_tag=NDY24_19090;product=virulence factor;protein_id=UUE97830.1;transl_table=11 CP098602.1 Genbank gene 4414809 4416146 . - . ID=gene-NDY24_19095;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=NDY24_19095 CP098602.1 Protein Homology CDS 4414809 4416146 . - 0 ID=cds-UUE97831.1;Parent=gene-NDY24_19095;Dbxref=NCBI_GP:UUE97831.1;Name=UUE97831.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507983.1;locus_tag=NDY24_19095;product=exodeoxyribonuclease VII large subunit;protein_id=UUE97831.1;transl_table=11 CP098602.1 Genbank gene 4416189 4417268 . - . ID=gene-NDY24_19100;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=NDY24_19100 CP098602.1 Protein Homology CDS 4416189 4417268 . - 0 ID=cds-UUE97832.1;Parent=gene-NDY24_19100;Dbxref=NCBI_GP:UUE97832.1;Name=UUE97832.1;Ontology_term=GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019182804.1;locus_tag=NDY24_19100;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=UUE97832.1;transl_table=11 CP098602.1 Genbank gene 4417293 4418780 . + . ID=gene-NDY24_19105;Name=NDY24_19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19105 CP098602.1 Protein Homology CDS 4417293 4418780 . + 0 ID=cds-UUE97833.1;Parent=gene-NDY24_19105;Dbxref=NCBI_GP:UUE97833.1;Name=UUE97833.1;Ontology_term=GO:0052855;gbkey=CDS;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965703.1;locus_tag=NDY24_19105;product=NAD(P)H-hydrate dehydratase;protein_id=UUE97833.1;transl_table=11 CP098602.1 Genbank gene 4418777 4419277 . + . ID=gene-NDY24_19110;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=NDY24_19110 CP098602.1 Protein Homology CDS 4418777 4419277 . + 0 ID=cds-UUE97834.1;Parent=gene-NDY24_19110;Dbxref=NCBI_GP:UUE97834.1;Name=UUE97834.1;Ontology_term=GO:0006400,GO:0016887,GO:0005737;gbkey=CDS;gene=tsaE;go_component=cytoplasm|0005737||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452171.1;locus_tag=NDY24_19110;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=UUE97834.1;transl_table=11 CP098602.1 Genbank pseudogene 4419348 4421079 . + . ID=gene-NDY24_19115;Name=NDY24_19115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_19115;pseudo=true CP098602.1 Protein Homology CDS 4419348 4421079 . + 0 ID=cds-NDY24_19115;Parent=gene-NDY24_19115;Note=frameshifted;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159951.1;locus_tag=NDY24_19115;product=N-acetylmuramoyl-L-alanine amidase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4421217 4423079 . + . ID=gene-NDY24_19120;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=NDY24_19120 CP098602.1 Protein Homology CDS 4421217 4423079 . + 0 ID=cds-UUE97835.1;Parent=gene-NDY24_19120;Dbxref=NCBI_GP:UUE97835.1;Name=UUE97835.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486008.1;locus_tag=NDY24_19120;product=DNA mismatch repair endonuclease MutL;protein_id=UUE97835.1;transl_table=11 CP098602.1 Genbank gene 4423079 4424017 . + . ID=gene-NDY24_19125;Name=NDY24_19125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19125 CP098602.1 Protein Homology CDS 4423079 4424017 . + 0 ID=cds-UUE97836.1;Parent=gene-NDY24_19125;Dbxref=NCBI_GP:UUE97836.1;Name=UUE97836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452174.1;locus_tag=NDY24_19125;product=DUF1684 domain-containing protein;protein_id=UUE97836.1;transl_table=11 CP098602.1 Genbank gene 4424034 4424999 . + . ID=gene-NDY24_19130;Name=NDY24_19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19130 CP098602.1 Protein Homology CDS 4424034 4424999 . + 0 ID=cds-UUE97837.1;Parent=gene-NDY24_19130;Dbxref=NCBI_GP:UUE97837.1;Name=UUE97837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904483.1;locus_tag=NDY24_19130;product=TraB/GumN family protein;protein_id=UUE97837.1;transl_table=11 CP098602.1 Genbank gene 4425047 4425637 . - . ID=gene-NDY24_19135;Name=phaR;gbkey=Gene;gene=phaR;gene_biotype=protein_coding;locus_tag=NDY24_19135 CP098602.1 Protein Homology CDS 4425047 4425637 . - 0 ID=cds-UUE97838.1;Parent=gene-NDY24_19135;Dbxref=NCBI_GP:UUE97838.1;Name=UUE97838.1;Ontology_term=GO:0006355;gbkey=CDS;gene=phaR;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486016.1;locus_tag=NDY24_19135;product=polyhydroxyalkanoate synthesis repressor PhaR;protein_id=UUE97838.1;transl_table=11 CP098602.1 Genbank gene 4425796 4426548 . - . ID=gene-NDY24_19140;Name=NDY24_19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19140 CP098602.1 Protein Homology CDS 4425796 4426548 . - 0 ID=cds-UUF00478.1;Parent=gene-NDY24_19140;Dbxref=NCBI_GP:UUF00478.1;Name=UUF00478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037438.1;locus_tag=NDY24_19140;product=beta-ketoacyl-ACP reductase;protein_id=UUF00478.1;transl_table=11 CP098602.1 Genbank gene 4426650 4427516 . - . ID=gene-NDY24_19145;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=NDY24_19145 CP098602.1 Protein Homology CDS 4426650 4427516 . - 0 ID=cds-UUE97839.1;Parent=gene-NDY24_19145;Dbxref=NCBI_GP:UUE97839.1;Name=UUE97839.1;Ontology_term=GO:0043039,GO:0004812;gbkey=CDS;gene=gluQRS;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452178.1;locus_tag=NDY24_19145;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=UUE97839.1;transl_table=11 CP098602.1 Genbank gene 4427615 4428493 . + . ID=gene-NDY24_19150;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=NDY24_19150 CP098602.1 Protein Homology CDS 4427615 4428493 . + 0 ID=cds-UUE97840.1;Parent=gene-NDY24_19150;Dbxref=NCBI_GP:UUE97840.1;Name=UUE97840.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051556.1;locus_tag=NDY24_19150;product=protease HtpX;protein_id=UUE97840.1;transl_table=11 CP098602.1 Genbank gene 4428906 4430975 . - . ID=gene-NDY24_19155;Name=NDY24_19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19155 CP098602.1 Protein Homology CDS 4428906 4430975 . - 0 ID=cds-UUE97841.1;Parent=gene-NDY24_19155;Dbxref=NCBI_GP:UUE97841.1;Name=UUE97841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037435.1;locus_tag=NDY24_19155;product=EAL domain-containing protein;protein_id=UUE97841.1;transl_table=11 CP098602.1 Genbank gene 4431093 4432274 . - . ID=gene-NDY24_19160;Name=NDY24_19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19160 CP098602.1 Protein Homology CDS 4431093 4432274 . - 0 ID=cds-UUE97842.1;Parent=gene-NDY24_19160;Dbxref=NCBI_GP:UUE97842.1;Name=UUE97842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005923170.1;locus_tag=NDY24_19160;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=UUE97842.1;transl_table=11 CP098602.1 Genbank gene 4432271 4432819 . - . ID=gene-NDY24_19165;Name=NDY24_19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19165 CP098602.1 Protein Homology CDS 4432271 4432819 . - 0 ID=cds-UUE97843.1;Parent=gene-NDY24_19165;Dbxref=NCBI_GP:UUE97843.1;Name=UUE97843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503075.1;locus_tag=NDY24_19165;product=YaeQ family protein;protein_id=UUE97843.1;transl_table=11 CP098602.1 Genbank gene 4432881 4433360 . - . ID=gene-NDY24_19170;Name=NDY24_19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19170 CP098602.1 Protein Homology CDS 4432881 4433360 . - 0 ID=cds-UUE97844.1;Parent=gene-NDY24_19170;Dbxref=NCBI_GP:UUE97844.1;Name=UUE97844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019397064.1;locus_tag=NDY24_19170;product=YaiI/YqxD family protein;protein_id=UUE97844.1;transl_table=11 CP098602.1 Genbank gene 4433628 4433837 . + . ID=gene-NDY24_19175;Name=NDY24_19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19175 CP098602.1 Protein Homology CDS 4433628 4433837 . + 0 ID=cds-UUE97845.1;Parent=gene-NDY24_19175;Dbxref=NCBI_GP:UUE97845.1;Name=UUE97845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009597534.1;locus_tag=NDY24_19175;product=cold-shock protein;protein_id=UUE97845.1;transl_table=11 CP098602.1 Genbank gene 4434018 4434716 . + . ID=gene-NDY24_19180;Name=NDY24_19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19180 CP098602.1 Protein Homology CDS 4434018 4434716 . + 0 ID=cds-UUE97846.1;Parent=gene-NDY24_19180;Dbxref=NCBI_GP:UUE97846.1;Name=UUE97846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156137.1;locus_tag=NDY24_19180;product=glutathione S-transferase;protein_id=UUE97846.1;transl_table=11 CP098602.1 Genbank gene 4434856 4435722 . - . ID=gene-NDY24_19185;Name=NDY24_19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19185 CP098602.1 Protein Homology CDS 4434856 4435722 . - 0 ID=cds-UUE97847.1;Parent=gene-NDY24_19185;Dbxref=NCBI_GP:UUE97847.1;Name=UUE97847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451991.1;locus_tag=NDY24_19185;product=alpha/beta hydrolase;protein_id=UUE97847.1;transl_table=11 CP098602.1 Genbank gene 4435896 4437452 . + . ID=gene-NDY24_19190;Name=NDY24_19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19190 CP098602.1 Protein Homology CDS 4435896 4437452 . + 0 ID=cds-UUE97848.1;Parent=gene-NDY24_19190;Dbxref=NCBI_GP:UUE97848.1;Name=UUE97848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408741.1;locus_tag=NDY24_19190;product=YdiU family protein;protein_id=UUE97848.1;transl_table=11 CP098602.1 Genbank gene 4437547 4438107 . + . ID=gene-NDY24_19195;Name=NDY24_19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19195 CP098602.1 Protein Homology CDS 4437547 4438107 . + 0 ID=cds-UUE97849.1;Parent=gene-NDY24_19195;Dbxref=NCBI_GP:UUE97849.1;Name=UUE97849.1;Ontology_term=GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965724.1;locus_tag=NDY24_19195;product=adenine phosphoribosyltransferase;protein_id=UUE97849.1;transl_table=11 CP098602.1 Genbank gene 4438240 4439616 . - . ID=gene-NDY24_19200;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=NDY24_19200 CP098602.1 Protein Homology CDS 4438240 4439616 . - 0 ID=cds-UUE97850.1;Parent=gene-NDY24_19200;Dbxref=NCBI_GP:UUE97850.1;Name=UUE97850.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090365.1;locus_tag=NDY24_19200;product=ATP-dependent RNA helicase DbpA;protein_id=UUE97850.1;transl_table=11 CP098602.1 Genbank gene 4439717 4441612 . + . ID=gene-NDY24_19205;Name=NDY24_19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19205 CP098602.1 Protein Homology CDS 4439717 4441612 . + 0 ID=cds-UUE97851.1;Parent=gene-NDY24_19205;Dbxref=NCBI_GP:UUE97851.1;Name=UUE97851.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005923190.1;locus_tag=NDY24_19205;product=ATP-binding cassette domain-containing protein;protein_id=UUE97851.1;transl_table=11 CP098602.1 Genbank gene 4442119 4442544 . - . ID=gene-NDY24_19210;Name=NDY24_19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19210 CP098602.1 Protein Homology CDS 4442119 4442544 . - 0 ID=cds-UUE97852.1;Parent=gene-NDY24_19210;Dbxref=NCBI_GP:UUE97852.1;Name=UUE97852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486050.1;locus_tag=NDY24_19210;product=barstar family protein;protein_id=UUE97852.1;transl_table=11 CP098602.1 Genbank gene 4442541 4442990 . - . ID=gene-NDY24_19215;Name=NDY24_19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19215 CP098602.1 Protein Homology CDS 4442541 4442990 . - 0 ID=cds-UUE97853.1;Parent=gene-NDY24_19215;Dbxref=NCBI_GP:UUE97853.1;Name=UUE97853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372742.1;locus_tag=NDY24_19215;product=ribonuclease;protein_id=UUE97853.1;transl_table=11 CP098602.1 Genbank gene 4443257 4443868 . + . ID=gene-NDY24_19220;Name=NDY24_19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19220 CP098602.1 Protein Homology CDS 4443257 4443868 . + 0 ID=cds-UUE97854.1;Parent=gene-NDY24_19220;Dbxref=NCBI_GP:UUE97854.1;Name=UUE97854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037422.1;locus_tag=NDY24_19220;product=superoxide dismutase;protein_id=UUE97854.1;transl_table=11 CP098602.1 Genbank gene 4444029 4444862 . - . ID=gene-NDY24_19225;Name=NDY24_19225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19225 CP098602.1 Protein Homology CDS 4444029 4444862 . - 0 ID=cds-UUE97855.1;Parent=gene-NDY24_19225;Dbxref=NCBI_GP:UUE97855.1;Name=UUE97855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913068.1;locus_tag=NDY24_19225;product=inositol monophosphatase;protein_id=UUE97855.1;transl_table=11 CP098602.1 Genbank gene 4444980 4445747 . + . ID=gene-NDY24_19230;Name=NDY24_19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19230 CP098602.1 Protein Homology CDS 4444980 4445747 . + 0 ID=cds-UUE97856.1;Parent=gene-NDY24_19230;Dbxref=NCBI_GP:UUE97856.1;Name=UUE97856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486059.1;locus_tag=NDY24_19230;product=RNA methyltransferase;protein_id=UUE97856.1;transl_table=11 CP098602.1 Genbank gene 4445798 4446727 . + . ID=gene-NDY24_19235;Name=NDY24_19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19235 CP098602.1 Protein Homology CDS 4445798 4446727 . + 0 ID=cds-UUE97857.1;Parent=gene-NDY24_19235;Dbxref=NCBI_GP:UUE97857.1;Name=UUE97857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850179.1;locus_tag=NDY24_19235;product=phosphate/phosphite/phosphonate ABC transporter substrate-binding protein;protein_id=UUE97857.1;transl_table=11 CP098602.1 Genbank pseudogene 4446724 4448845 . + . ID=gene-NDY24_19240;Name=NDY24_19240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_19240;pseudo=true CP098602.1 Protein Homology CDS 4446724 4448845 . + 0 ID=cds-NDY24_19240;Parent=gene-NDY24_19240;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017168504.1;locus_tag=NDY24_19240;product=EAL domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4448977 4450007 . - . ID=gene-NDY24_19245;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=pseudogene;locus_tag=NDY24_19245;pseudo=true CP098602.1 Protein Homology CDS 4448977 4450007 . - 0 ID=cds-NDY24_19245;Parent=gene-NDY24_19245;Note=frameshifted;Ontology_term=GO:0072581;gbkey=CDS;gene=epmB;go_process=protein-N6-(L-lysyl)-L-lysine modification to protein-N6-(beta-lysyl)-L-lysine|0072581||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408738.1;locus_tag=NDY24_19245;product=EF-P beta-lysylation protein EpmB;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4450111 4450677 . + . ID=gene-NDY24_19250;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=NDY24_19250 CP098602.1 Protein Homology CDS 4450111 4450677 . + 0 ID=cds-UUE97858.1;Parent=gene-NDY24_19250;Dbxref=NCBI_GP:UUE97858.1;Name=UUE97858.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301003.1;locus_tag=NDY24_19250;product=elongation factor P;protein_id=UUE97858.1;transl_table=11 CP098602.1 Genbank pseudogene 4450683 4451533 . + . ID=gene-NDY24_19255;Name=NDY24_19255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_19255;pseudo=true CP098602.1 Protein Homology CDS 4450683 4451533 . + 0 ID=cds-NDY24_19255;Parent=gene-NDY24_19255;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037415.1;locus_tag=NDY24_19255;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4451552 4452889 . + . ID=gene-NDY24_19260;Name=NDY24_19260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19260 CP098602.1 Protein Homology CDS 4451552 4452889 . + 0 ID=cds-UUE97859.1;Parent=gene-NDY24_19260;Dbxref=NCBI_GP:UUE97859.1;Name=UUE97859.1;Ontology_term=GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159956.1;locus_tag=NDY24_19260;product=TRZ/ATZ family hydrolase;protein_id=UUE97859.1;transl_table=11 CP098602.1 Genbank gene 4452919 4453638 . + . ID=gene-NDY24_19265;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=NDY24_19265 CP098602.1 Protein Homology CDS 4452919 4453638 . + 0 ID=cds-UUE97860.1;Parent=gene-NDY24_19265;Dbxref=NCBI_GP:UUE97860.1;Name=UUE97860.1;Ontology_term=GO:0006744,GO:0008689;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinone-9 3-O-methyltransferase activity|0008689||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372777.1;locus_tag=NDY24_19265;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=UUE97860.1;transl_table=11 CP098602.1 Genbank pseudogene 4453694 4454384 . + . ID=gene-NDY24_19270;Name=NDY24_19270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_19270;pseudo=true CP098602.1 Protein Homology CDS 4453694 4454384 . + 0 ID=cds-NDY24_19270;Parent=gene-NDY24_19270;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450328.1;locus_tag=NDY24_19270;product=phosphoglycolate phosphatase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4454397 4455153 . + . ID=gene-NDY24_19275;Name=NDY24_19275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_19275;pseudo=true CP098602.1 Protein Homology CDS 4454397 4455153 . + 0 ID=cds-NDY24_19275;Parent=gene-NDY24_19275;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347724.1;locus_tag=NDY24_19275;product=phytoene/squalene synthase family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4455776 4457446 . - . ID=gene-NDY24_19280;Name=NDY24_19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19280 CP098602.1 Protein Homology CDS 4455776 4457446 . - 0 ID=cds-UUE97861.1;Parent=gene-NDY24_19280;Dbxref=NCBI_GP:UUE97861.1;Name=UUE97861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449342.1;locus_tag=NDY24_19280;product=glycoside hydrolase family 28 protein;protein_id=UUE97861.1;transl_table=11 CP098602.1 Genbank gene 4457744 4457833 . + . ID=gene-NDY24_19285;Name=NDY24_19285;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_19285 CP098602.1 cmsearch ncRNA 4457744 4457833 . + . ID=rna-NDY24_19285;Parent=gene-NDY24_19285;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_19285;product=sX9 sRNA CP098602.1 cmsearch exon 4457744 4457833 . + . ID=exon-NDY24_19285-1;Parent=rna-NDY24_19285;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_19285;product=sX9 sRNA CP098602.1 Genbank gene 4458217 4459023 . - . ID=gene-NDY24_19290;Name=NDY24_19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19290 CP098602.1 Protein Homology CDS 4458217 4459023 . - 0 ID=cds-UUE97862.1;Parent=gene-NDY24_19290;Dbxref=NCBI_GP:UUE97862.1;Name=UUE97862.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002801519.1;locus_tag=NDY24_19290;product=IS5 family transposase;protein_id=UUE97862.1;transl_table=11 CP098602.1 Genbank gene 4459272 4460405 . - . ID=gene-NDY24_19295;Name=NDY24_19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19295 CP098602.1 Protein Homology CDS 4459272 4460405 . - 0 ID=cds-UUE97863.1;Parent=gene-NDY24_19295;Dbxref=NCBI_GP:UUE97863.1;Name=UUE97863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903775.1;locus_tag=NDY24_19295;product=pectate lyase;protein_id=UUE97863.1;transl_table=11 CP098602.1 Genbank gene 4460584 4461609 . - . ID=gene-NDY24_19300;Name=NDY24_19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19300 CP098602.1 Protein Homology CDS 4460584 4461609 . - 0 ID=cds-UUE97864.1;Parent=gene-NDY24_19300;Dbxref=NCBI_GP:UUE97864.1;Name=UUE97864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347720.1;locus_tag=NDY24_19300;product=hypothetical protein;protein_id=UUE97864.1;transl_table=11 CP098602.1 Genbank gene 4462028 4462531 . + . ID=gene-NDY24_19305;Name=NDY24_19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19305 CP098602.1 Protein Homology CDS 4462028 4462531 . + 0 ID=cds-UUE97865.1;Parent=gene-NDY24_19305;Dbxref=NCBI_GP:UUE97865.1;Name=UUE97865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472089.1;locus_tag=NDY24_19305;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=UUE97865.1;transl_table=11 CP098602.1 Genbank gene 4462718 4463008 . + . ID=gene-NDY24_19310;Name=NDY24_19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19310 CP098602.1 Protein Homology CDS 4462718 4463008 . + 0 ID=cds-UUE97866.1;Parent=gene-NDY24_19310;Dbxref=NCBI_GP:UUE97866.1;Name=UUE97866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156118.1;locus_tag=NDY24_19310;product=hypothetical protein;protein_id=UUE97866.1;transl_table=11 CP098602.1 Genbank gene 4463199 4463789 . + . ID=gene-NDY24_19315;Name=NDY24_19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19315 CP098602.1 Protein Homology CDS 4463199 4463789 . + 0 ID=cds-UUE97867.1;Parent=gene-NDY24_19315;Dbxref=NCBI_GP:UUE97867.1;Name=UUE97867.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024966.2;locus_tag=NDY24_19315;product=nuclear transport factor 2 family protein;protein_id=UUE97867.1;transl_table=11 CP098602.1 Genbank gene 4463711 4463980 . + . ID=gene-NDY24_19320;Name=NDY24_19320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19320 CP098602.1 Protein Homology CDS 4463711 4463980 . + 0 ID=cds-UUE97868.1;Parent=gene-NDY24_19320;Dbxref=NCBI_GP:UUE97868.1;Name=UUE97868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452610.1;locus_tag=NDY24_19320;product=DUF3471 domain-containing protein;protein_id=UUE97868.1;transl_table=11 CP098602.1 Genbank gene 4464067 4464912 . - . ID=gene-NDY24_19325;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=NDY24_19325 CP098602.1 Protein Homology CDS 4464067 4464912 . - 0 ID=cds-UUE97869.1;Parent=gene-NDY24_19325;Dbxref=NCBI_GP:UUE97869.1;Name=UUE97869.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452609.1;locus_tag=NDY24_19325;product=ethanolamine ammonia-lyase subunit EutC;protein_id=UUE97869.1;transl_table=11 CP098602.1 Genbank gene 4464912 4466318 . - . ID=gene-NDY24_19330;Name=NDY24_19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19330 CP098602.1 Protein Homology CDS 4464912 4466318 . - 0 ID=cds-UUE97870.1;Parent=gene-NDY24_19330;Dbxref=NCBI_GP:UUE97870.1;Name=UUE97870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452608.1;locus_tag=NDY24_19330;product=ethanolamine ammonia-lyase subunit EutB;protein_id=UUE97870.1;transl_table=11 CP098602.1 Genbank gene 4466315 4467679 . - . ID=gene-NDY24_19335;Name=eat;gbkey=Gene;gene=eat;gene_biotype=protein_coding;locus_tag=NDY24_19335 CP098602.1 Protein Homology CDS 4466315 4467679 . - 0 ID=cds-UUE97871.1;Parent=gene-NDY24_19335;Dbxref=NCBI_GP:UUE97871.1;Name=UUE97871.1;Ontology_term=GO:0006865,GO:0015171,GO:0016021;gbkey=CDS;gene=eat;go_component=integral component of membrane|0016021||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452607.1;locus_tag=NDY24_19335;product=ethanolamine permease;protein_id=UUE97871.1;transl_table=11 CP098602.1 Genbank gene 4468035 4468874 . - . ID=gene-NDY24_19340;Name=NDY24_19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19340 CP098602.1 Protein Homology CDS 4468035 4468874 . - 0 ID=cds-UUE97872.1;Parent=gene-NDY24_19340;Dbxref=NCBI_GP:UUE97872.1;Name=UUE97872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159191.1;locus_tag=NDY24_19340;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=UUE97872.1;transl_table=11 CP098602.1 Genbank gene 4468874 4470223 . - . ID=gene-NDY24_19345;Name=NDY24_19345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19345 CP098602.1 Protein Homology CDS 4468874 4470223 . - 0 ID=cds-UUE97873.1;Parent=gene-NDY24_19345;Dbxref=NCBI_GP:UUE97873.1;Name=UUE97873.1;Ontology_term=GO:0016812;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302579.1;locus_tag=NDY24_19345;product=dihydroorotase;protein_id=UUE97873.1;transl_table=11 CP098602.1 Genbank gene 4470220 4470513 . - . ID=gene-NDY24_19350;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=NDY24_19350 CP098602.1 Protein Homology CDS 4470220 4470513 . - 0 ID=cds-UUE97874.1;Parent=gene-NDY24_19350;Dbxref=NCBI_GP:UUE97874.1;Name=UUE97874.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158484.1;locus_tag=NDY24_19350;product=membrane protein insertion efficiency factor YidD;protein_id=UUE97874.1;transl_table=11 CP098602.1 Genbank gene 4470604 4471644 . + . ID=gene-NDY24_19355;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=NDY24_19355 CP098602.1 Protein Homology CDS 4470604 4471644 . + 0 ID=cds-UUE97875.1;Parent=gene-NDY24_19355;Dbxref=NCBI_GP:UUE97875.1;Name=UUE97875.1;Ontology_term=GO:0006355,GO:0019899;gbkey=CDS;gene=dksA;go_function=enzyme binding|0019899||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112367.1;locus_tag=NDY24_19355;product=RNA polymerase-binding protein DksA;protein_id=UUE97875.1;transl_table=11 CP098602.1 Genbank gene 4471784 4473037 . - . ID=gene-NDY24_19360;Name=NDY24_19360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19360 CP098602.1 Protein Homology CDS 4471784 4473037 . - 0 ID=cds-UUE97876.1;Parent=gene-NDY24_19360;Dbxref=NCBI_GP:UUE97876.1;Name=UUE97876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573410.1;locus_tag=NDY24_19360;product=MFS transporter;protein_id=UUE97876.1;transl_table=11 CP098602.1 Genbank gene 4473034 4473471 . - . ID=gene-NDY24_19365;Name=NDY24_19365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19365 CP098602.1 Protein Homology CDS 4473034 4473471 . - 0 ID=cds-UUE97877.1;Parent=gene-NDY24_19365;Dbxref=NCBI_GP:UUE97877.1;Name=UUE97877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159960.1;locus_tag=NDY24_19365;product=SufE family protein;protein_id=UUE97877.1;transl_table=11 CP098602.1 Genbank gene 4473713 4475152 . - . ID=gene-NDY24_19370;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=NDY24_19370 CP098602.1 Protein Homology CDS 4473713 4475152 . - 0 ID=cds-UUE97878.1;Parent=gene-NDY24_19370;Dbxref=NCBI_GP:UUE97878.1;Name=UUE97878.1;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444736.1;locus_tag=NDY24_19370;product=cysteine--tRNA ligase;protein_id=UUE97878.1;transl_table=11 CP098602.1 Genbank gene 4475351 4475851 . + . ID=gene-NDY24_19375;Name=NDY24_19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19375 CP098602.1 Protein Homology CDS 4475351 4475851 . + 0 ID=cds-UUF00479.1;Parent=gene-NDY24_19375;Dbxref=NCBI_GP:UUF00479.1;Name=UUF00479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114649.1;locus_tag=NDY24_19375;product=hypothetical protein;protein_id=UUF00479.1;transl_table=11 CP098602.1 Genbank gene 4476164 4477195 . + . ID=gene-NDY24_19380;Name=NDY24_19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19380 CP098602.1 Protein Homology CDS 4476164 4477195 . + 0 ID=cds-UUE97879.1;Parent=gene-NDY24_19380;Dbxref=NCBI_GP:UUE97879.1;Name=UUE97879.1;Ontology_term=GO:0042450,GO:0016597,GO:0043857;gbkey=CDS;go_function=amino acid binding|0016597||IEA,N-acetylornithine carbamoyltransferase activity|0043857||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922555.1;locus_tag=NDY24_19380;product=N-acetylornithine carbamoyltransferase;protein_id=UUE97879.1;transl_table=11 CP098602.1 Genbank gene 4477248 4478489 . + . ID=gene-NDY24_19385;Name=NDY24_19385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19385 CP098602.1 Protein Homology CDS 4477248 4478489 . + 0 ID=cds-UUE97880.1;Parent=gene-NDY24_19385;Dbxref=NCBI_GP:UUE97880.1;Name=UUE97880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486949.1;locus_tag=NDY24_19385;product=argininosuccinate synthase;protein_id=UUE97880.1;transl_table=11 CP098602.1 Genbank gene 4478716 4479816 . + . ID=gene-NDY24_19390;Name=NDY24_19390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19390 CP098602.1 Protein Homology CDS 4478716 4479816 . + 0 ID=cds-UUE97881.1;Parent=gene-NDY24_19390;Dbxref=NCBI_GP:UUE97881.1;Name=UUE97881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237600.1;locus_tag=NDY24_19390;product=acetylornithine deacetylase;protein_id=UUE97881.1;transl_table=11 CP098602.1 Genbank gene 4479892 4481235 . + . ID=gene-NDY24_19395;Name=NDY24_19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19395 CP098602.1 Protein Homology CDS 4479892 4481235 . + 0 ID=cds-UUE97882.1;Parent=gene-NDY24_19395;Dbxref=NCBI_GP:UUE97882.1;Name=UUE97882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174254.1;locus_tag=NDY24_19395;product=acetylglutamate kinase;protein_id=UUE97882.1;transl_table=11 CP098602.1 Genbank gene 4481241 4481852 . + . ID=gene-NDY24_19400;Name=NDY24_19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19400 CP098602.1 Protein Homology CDS 4481241 4481852 . + 0 ID=cds-UUE97883.1;Parent=gene-NDY24_19400;Dbxref=NCBI_GP:UUE97883.1;Name=UUE97883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573396.1;locus_tag=NDY24_19400;product=GNAT family N-acetyltransferase;protein_id=UUE97883.1;transl_table=11 CP098602.1 Genbank gene 4481849 4482799 . + . ID=gene-NDY24_19405;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=NDY24_19405 CP098602.1 Protein Homology CDS 4481849 4482799 . + 0 ID=cds-UUE97884.1;Parent=gene-NDY24_19405;Dbxref=NCBI_GP:UUE97884.1;Name=UUE97884.1;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463283.1;locus_tag=NDY24_19405;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=UUE97884.1;transl_table=11 CP098602.1 Genbank gene 4482923 4484218 . + . ID=gene-NDY24_19410;Name=NDY24_19410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19410 CP098602.1 Protein Homology CDS 4482923 4484218 . + 0 ID=cds-UUE97885.1;Parent=gene-NDY24_19410;Dbxref=NCBI_GP:UUE97885.1;Name=UUE97885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116208.1;locus_tag=NDY24_19410;product=argininosuccinate lyase;protein_id=UUE97885.1;transl_table=11 CP098602.1 Genbank gene 4484218 4484583 . + . ID=gene-NDY24_19415;Name=NDY24_19415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19415 CP098602.1 Protein Homology CDS 4484218 4484583 . + 0 ID=cds-UUE97886.1;Parent=gene-NDY24_19415;Dbxref=NCBI_GP:UUE97886.1;Name=UUE97886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449418.1;locus_tag=NDY24_19415;product=cupin domain-containing protein;protein_id=UUE97886.1;transl_table=11 CP098602.1 Genbank gene 4484583 4484843 . + . ID=gene-NDY24_19420;Name=NDY24_19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19420 CP098602.1 Protein Homology CDS 4484583 4484843 . + 0 ID=cds-UUE97887.1;Parent=gene-NDY24_19420;Dbxref=NCBI_GP:UUE97887.1;Name=UUE97887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347701.1;locus_tag=NDY24_19420;product=YciI family protein;protein_id=UUE97887.1;transl_table=11 CP098602.1 Genbank gene 4484875 4486011 . + . ID=gene-NDY24_19425;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=NDY24_19425 CP098602.1 Protein Homology CDS 4484875 4486011 . + 0 ID=cds-UUE97888.1;Parent=gene-NDY24_19425;Dbxref=NCBI_GP:UUE97888.1;Name=UUE97888.1;Ontology_term=GO:0006561,GO:0004349;gbkey=CDS;gene=proB;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449416.1;locus_tag=NDY24_19425;product=glutamate 5-kinase;protein_id=UUE97888.1;transl_table=11 CP098602.1 Genbank gene 4486146 4487390 . + . ID=gene-NDY24_19430;Name=NDY24_19430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19430 CP098602.1 Protein Homology CDS 4486146 4487390 . + 0 ID=cds-UUE97889.1;Parent=gene-NDY24_19430;Dbxref=NCBI_GP:UUE97889.1;Name=UUE97889.1;Ontology_term=GO:0006561,GO:0004350,GO:0016620;gbkey=CDS;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972357.1;locus_tag=NDY24_19430;product=glutamate-5-semialdehyde dehydrogenase;protein_id=UUE97889.1;transl_table=11 CP098602.1 Genbank gene 4487587 4489500 . + . ID=gene-NDY24_19435;Name=NDY24_19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19435 CP098602.1 Protein Homology CDS 4487587 4489500 . + 0 ID=cds-UUE97890.1;Parent=gene-NDY24_19435;Dbxref=NCBI_GP:UUE97890.1;Name=UUE97890.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051520.1;locus_tag=NDY24_19435;product=CocE/NonD family hydrolase;protein_id=UUE97890.1;transl_table=11 CP098602.1 Genbank gene 4489481 4490707 . - . ID=gene-NDY24_19440;Name=NDY24_19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19440 CP098602.1 Protein Homology CDS 4489481 4490707 . - 0 ID=cds-UUF00480.1;Parent=gene-NDY24_19440;Dbxref=NCBI_GP:UUF00480.1;Name=UUF00480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157790.1;locus_tag=NDY24_19440;product=MFS transporter;protein_id=UUF00480.1;transl_table=11 CP098602.1 Genbank gene 4490831 4490907 . - . ID=gene-NDY24_19445;Name=NDY24_19445;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_19445 CP098602.1 tRNAscan-SE tRNA 4490831 4490907 . - . ID=rna-NDY24_19445;Parent=gene-NDY24_19445;anticodon=(pos:complement(4490871..4490873));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_19445;product=tRNA-Pro CP098602.1 tRNAscan-SE exon 4490831 4490907 . - . ID=exon-NDY24_19445-1;Parent=rna-NDY24_19445;anticodon=(pos:complement(4490871..4490873));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_19445;product=tRNA-Pro CP098602.1 Genbank gene 4490967 4491077 . - . ID=gene-NDY24_19450;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=NDY24_19450 CP098602.1 Protein Homology CDS 4490967 4491077 . - 0 ID=cds-UUE97891.1;Parent=gene-NDY24_19450;Dbxref=NCBI_GP:UUE97891.1;Name=UUE97891.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573380.1;locus_tag=NDY24_19450;product=cytochrome bd-I oxidase subunit CydX;protein_id=UUE97891.1;transl_table=11 CP098602.1 Genbank pseudogene 4491169 4492321 . - . ID=gene-NDY24_19455;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=pseudogene;locus_tag=NDY24_19455;pseudo=true CP098602.1 Protein Homology CDS 4491169 4492321 . - 0 ID=cds-NDY24_19455;Parent=gene-NDY24_19455;Note=frameshifted;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347694.1;locus_tag=NDY24_19455;product=cytochrome d ubiquinol oxidase subunit II;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4492337 4493959 . - . ID=gene-NDY24_19460;Name=NDY24_19460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19460 CP098602.1 Protein Homology CDS 4492337 4493959 . - 0 ID=cds-UUE97892.1;Parent=gene-NDY24_19460;Dbxref=NCBI_GP:UUE97892.1;Name=UUE97892.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163785.1;locus_tag=NDY24_19460;product=cytochrome ubiquinol oxidase subunit I;protein_id=UUE97892.1;transl_table=11 CP098602.1 Genbank gene 4494113 4495849 . + . ID=gene-NDY24_19465;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=NDY24_19465 CP098602.1 Protein Homology CDS 4494113 4495849 . + 0 ID=cds-UUE97893.1;Parent=gene-NDY24_19465;Dbxref=NCBI_GP:UUE97893.1;Name=UUE97893.1;Ontology_term=GO:0033228,GO:0005524,GO:0033230,GO:0005887,GO:0055051;gbkey=CDS;gene=cydD;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C integrated substrate binding|0055051||IEA;go_function=ATP binding|0005524||IEA,ABC-type cysteine transporter activity|0033230||IEA;go_process=cysteine export across plasma membrane|0033228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850524.1;locus_tag=NDY24_19465;product=thiol reductant ABC exporter subunit CydD;protein_id=UUE97893.1;transl_table=11 CP098602.1 Genbank pseudogene 4495846 4497523 . + . ID=gene-NDY24_19470;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=pseudogene;locus_tag=NDY24_19470;pseudo=true CP098602.1 Protein Homology CDS 4495846 4497523 . + 0 ID=cds-NDY24_19470;Parent=gene-NDY24_19470;Note=frameshifted;Ontology_term=GO:0033228,GO:0005524,GO:0033230,GO:0005887,GO:0055051;gbkey=CDS;gene=cydC;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C integrated substrate binding|0055051||IEA;go_function=ATP binding|0005524||IEA,ABC-type cysteine transporter activity|0033230||IEA;go_process=cysteine export across plasma membrane|0033228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904041.1;locus_tag=NDY24_19470;product=thiol reductant ABC exporter subunit CydC;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4497659 4498063 . - . ID=gene-NDY24_19475;Name=NDY24_19475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19475 CP098602.1 Protein Homology CDS 4497659 4498063 . - 0 ID=cds-UUE97894.1;Parent=gene-NDY24_19475;Dbxref=NCBI_GP:UUE97894.1;Name=UUE97894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904040.1;locus_tag=NDY24_19475;product=DUF1294 domain-containing protein;protein_id=UUE97894.1;transl_table=11 CP098602.1 Genbank pseudogene 4498075 4499276 . - . ID=gene-NDY24_19480;Name=NDY24_19480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_19480;pseudo=true CP098602.1 Protein Homology CDS 4498075 4499276 . - 0 ID=cds-NDY24_19480;Parent=gene-NDY24_19480;Note=frameshifted;Ontology_term=GO:0009058,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503612.1;locus_tag=NDY24_19480;product=homoserine O-acetyltransferase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4499852 4499925 . + . ID=gene-NDY24_19485;Name=NDY24_19485;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_19485 CP098602.1 cmsearch ncRNA 4499852 4499925 . + . ID=rna-NDY24_19485;Parent=gene-NDY24_19485;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_19485;product=sX9 sRNA CP098602.1 cmsearch exon 4499852 4499925 . + . ID=exon-NDY24_19485-1;Parent=rna-NDY24_19485;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_19485;product=sX9 sRNA CP098602.1 Genbank pseudogene 4499973 4500985 . - . ID=gene-NDY24_19490;Name=NDY24_19490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_19490;pseudo=true CP098602.1 Protein Homology CDS 4499973 4500985 . - 0 ID=cds-NDY24_19490;Parent=gene-NDY24_19490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971030.1;locus_tag=NDY24_19490;product=tetratricopeptide repeat protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4500985 4501419 . - . ID=gene-NDY24_19495;Name=NDY24_19495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19495 CP098602.1 Protein Homology CDS 4500985 4501419 . - 0 ID=cds-UUE97895.1;Parent=gene-NDY24_19495;Dbxref=NCBI_GP:UUE97895.1;Name=UUE97895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051514.1;locus_tag=NDY24_19495;product=cytochrome c-type biogenesis protein CcmH;protein_id=UUE97895.1;transl_table=11 CP098602.1 Genbank gene 4501416 4502018 . - . ID=gene-NDY24_19500;Name=NDY24_19500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19500 CP098602.1 Protein Homology CDS 4501416 4502018 . - 0 ID=cds-UUE97896.1;Parent=gene-NDY24_19500;Dbxref=NCBI_GP:UUE97896.1;Name=UUE97896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157799.1;locus_tag=NDY24_19500;product=DsbE family thiol:disulfide interchange protein;protein_id=UUE97896.1;transl_table=11 CP098602.1 Genbank pseudogene 4502011 4503947 . - . ID=gene-NDY24_19505;Name=NDY24_19505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_19505;pseudo=true CP098602.1 Protein Homology CDS 4502011 4503947 . - 0 ID=cds-NDY24_19505;Parent=gene-NDY24_19505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171666.1;locus_tag=NDY24_19505;product=heme lyase CcmF/NrfE family subunit;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4504122 4504592 . - . ID=gene-NDY24_19510;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=NDY24_19510 CP098602.1 Protein Homology CDS 4504122 4504592 . - 0 ID=cds-UUE97897.1;Parent=gene-NDY24_19510;Dbxref=NCBI_GP:UUE97897.1;Name=UUE97897.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503607.1;locus_tag=NDY24_19510;product=cytochrome c maturation protein CcmE;protein_id=UUE97897.1;transl_table=11 CP098602.1 Genbank gene 4504589 4504762 . - . ID=gene-NDY24_19515;Name=NDY24_19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19515 CP098602.1 Protein Homology CDS 4504589 4504762 . - 0 ID=cds-UUE97898.1;Parent=gene-NDY24_19515;Dbxref=NCBI_GP:UUE97898.1;Name=UUE97898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913150.1;locus_tag=NDY24_19515;product=heme exporter protein CcmD;protein_id=UUE97898.1;transl_table=11 CP098602.1 Genbank gene 4504759 4505511 . - . ID=gene-NDY24_19520;Name=ccmC;gbkey=Gene;gene=ccmC;gene_biotype=protein_coding;locus_tag=NDY24_19520 CP098602.1 Protein Homology CDS 4504759 4505511 . - 0 ID=cds-UUE97899.1;Parent=gene-NDY24_19520;Dbxref=NCBI_GP:UUE97899.1;Name=UUE97899.1;Ontology_term=GO:0015886,GO:0015232,GO:0016020;gbkey=CDS;gene=ccmC;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171667.1;locus_tag=NDY24_19520;product=heme ABC transporter permease CcmC;protein_id=UUE97899.1;transl_table=11 CP098602.1 Genbank gene 4505641 4506336 . - . ID=gene-NDY24_19525;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=NDY24_19525 CP098602.1 Protein Homology CDS 4505641 4506336 . - 0 ID=cds-UUE97900.1;Parent=gene-NDY24_19525;Dbxref=NCBI_GP:UUE97900.1;Name=UUE97900.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002808060.1;locus_tag=NDY24_19525;product=heme exporter protein CcmB;protein_id=UUE97900.1;transl_table=11 CP098602.1 Genbank gene 4506333 4506977 . - . ID=gene-NDY24_19530;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=NDY24_19530 CP098602.1 Protein Homology CDS 4506333 4506977 . - 0 ID=cds-UUE97901.1;Parent=gene-NDY24_19530;Dbxref=NCBI_GP:UUE97901.1;Name=UUE97901.1;Ontology_term=GO:0015886,GO:0015439,GO:0043190;gbkey=CDS;gene=ccmA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type heme transporter activity|0015439||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971018.1;locus_tag=NDY24_19530;product=heme ABC exporter ATP-binding protein CcmA;protein_id=UUE97901.1;transl_table=11 CP098602.1 Genbank gene 4507194 4508342 . + . ID=gene-NDY24_19535;Name=NDY24_19535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19535 CP098602.1 Protein Homology CDS 4507194 4508342 . + 0 ID=cds-UUE97902.1;Parent=gene-NDY24_19535;Dbxref=NCBI_GP:UUE97902.1;Name=UUE97902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964632.1;locus_tag=NDY24_19535;product=pyridoxal phosphate-dependent aminotransferase;protein_id=UUE97902.1;transl_table=11 CP098602.1 Genbank gene 4508493 4509293 . + . ID=gene-NDY24_19540;Name=NDY24_19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19540 CP098602.1 Protein Homology CDS 4508493 4509293 . + 0 ID=cds-UUE97903.1;Parent=gene-NDY24_19540;Dbxref=NCBI_GP:UUE97903.1;Name=UUE97903.1;Ontology_term=GO:0006807;gbkey=CDS;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347683.1;locus_tag=NDY24_19540;product=amidohydrolase;protein_id=UUE97903.1;transl_table=11 CP098602.1 Genbank pseudogene 4509387 4510158 . - . ID=gene-NDY24_19545;Name=NDY24_19545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_19545;pseudo=true CP098602.1 Protein Homology CDS 4509387 4510158 . - 0 ID=cds-NDY24_19545;Parent=gene-NDY24_19545;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913158.1;locus_tag=NDY24_19545;product=glutaminyl-peptide cyclotransferase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4510324 4510761 . + . ID=gene-NDY24_19550;Name=NDY24_19550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19550 CP098602.1 Protein Homology CDS 4510324 4510761 . + 0 ID=cds-UUE97904.1;Parent=gene-NDY24_19550;Dbxref=NCBI_GP:UUE97904.1;Name=UUE97904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158703.1;locus_tag=NDY24_19550;product=hypothetical protein;protein_id=UUE97904.1;transl_table=11 CP098602.1 Genbank gene 4511156 4512793 . - . ID=gene-NDY24_19555;Name=NDY24_19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19555 CP098602.1 Protein Homology CDS 4511156 4512793 . - 0 ID=cds-UUE97905.1;Parent=gene-NDY24_19555;Dbxref=NCBI_GP:UUE97905.1;Name=UUE97905.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438191.1;locus_tag=NDY24_19555;product=pseudouridine synthase;protein_id=UUE97905.1;transl_table=11 CP098602.1 Genbank gene 4512786 4513748 . - . ID=gene-NDY24_19560;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=NDY24_19560 CP098602.1 Protein Homology CDS 4512786 4513748 . - 0 ID=cds-UUE97906.1;Parent=gene-NDY24_19560;Dbxref=NCBI_GP:UUE97906.1;Name=UUE97906.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237609.1;locus_tag=NDY24_19560;product=SMC-Scp complex subunit ScpB;protein_id=UUE97906.1;transl_table=11 CP098602.1 Genbank gene 4513762 4514667 . - . ID=gene-NDY24_19565;Name=NDY24_19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19565 CP098602.1 Protein Homology CDS 4513762 4514667 . - 0 ID=cds-UUE97907.1;Parent=gene-NDY24_19565;Dbxref=NCBI_GP:UUE97907.1;Name=UUE97907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904542.1;locus_tag=NDY24_19565;product=segregation/condensation protein A;protein_id=UUE97907.1;transl_table=11 CP098602.1 Genbank gene 4515036 4515335 . + . ID=gene-NDY24_19570;Name=NDY24_19570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19570 CP098602.1 Protein Homology CDS 4515036 4515335 . + 0 ID=cds-UUE97908.1;Parent=gene-NDY24_19570;Dbxref=NCBI_GP:UUE97908.1;Name=UUE97908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503597.1;locus_tag=NDY24_19570;product=YciI family protein;protein_id=UUE97908.1;transl_table=11 CP098602.1 Genbank gene 4515332 4515601 . + . ID=gene-NDY24_19575;Name=NDY24_19575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19575 CP098602.1 Protein Homology CDS 4515332 4515601 . + 0 ID=cds-UUE97909.1;Parent=gene-NDY24_19575;Dbxref=NCBI_GP:UUE97909.1;Name=UUE97909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904540.1;locus_tag=NDY24_19575;product=BolA family transcriptional regulator;protein_id=UUE97909.1;transl_table=11 CP098602.1 Genbank gene 4515926 4516948 . + . ID=gene-NDY24_19580;Name=NDY24_19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19580 CP098602.1 Protein Homology CDS 4515926 4516948 . + 0 ID=cds-UUE97910.1;Parent=gene-NDY24_19580;Dbxref=NCBI_GP:UUE97910.1;Name=UUE97910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451820.1;locus_tag=NDY24_19580;product=LacI family transcriptional regulator;protein_id=UUE97910.1;transl_table=11 CP098602.1 Genbank gene 4517103 4520081 . + . ID=gene-NDY24_19585;Name=NDY24_19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19585 CP098602.1 Protein Homology CDS 4517103 4520081 . + 0 ID=cds-UUE97911.1;Parent=gene-NDY24_19585;Dbxref=NCBI_GP:UUE97911.1;Name=UUE97911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172742.1;locus_tag=NDY24_19585;product=TonB-dependent receptor;protein_id=UUE97911.1;transl_table=11 CP098602.1 Genbank gene 4520182 4521819 . + . ID=gene-NDY24_19590;Name=NDY24_19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19590 CP098602.1 Protein Homology CDS 4520182 4521819 . + 0 ID=cds-UUE97912.1;Parent=gene-NDY24_19590;Dbxref=NCBI_GP:UUE97912.1;Name=UUE97912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451818.1;locus_tag=NDY24_19590;product=hypothetical protein;protein_id=UUE97912.1;transl_table=11 CP098602.1 Genbank gene 4521823 4523181 . + . ID=gene-NDY24_19595;Name=NDY24_19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19595 CP098602.1 Protein Homology CDS 4521823 4523181 . + 0 ID=cds-UUE97913.1;Parent=gene-NDY24_19595;Dbxref=NCBI_GP:UUE97913.1;Name=UUE97913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157813.1;locus_tag=NDY24_19595;product=sugar ABC transporter substrate-binding protein;protein_id=UUE97913.1;transl_table=11 CP098602.1 Genbank gene 4523178 4524062 . + . ID=gene-NDY24_19600;Name=NDY24_19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19600 CP098602.1 Protein Homology CDS 4523178 4524062 . + 0 ID=cds-UUE97914.1;Parent=gene-NDY24_19600;Dbxref=NCBI_GP:UUE97914.1;Name=UUE97914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157814.1;locus_tag=NDY24_19600;product=sugar ABC transporter permease;protein_id=UUE97914.1;transl_table=11 CP098602.1 Genbank gene 4524059 4524895 . + . ID=gene-NDY24_19605;Name=NDY24_19605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19605 CP098602.1 Protein Homology CDS 4524059 4524895 . + 0 ID=cds-UUE97915.1;Parent=gene-NDY24_19605;Dbxref=NCBI_GP:UUE97915.1;Name=UUE97915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017357393.1;locus_tag=NDY24_19605;product=carbohydrate ABC transporter permease;protein_id=UUE97915.1;transl_table=11 CP098602.1 Genbank gene 4524922 4528059 . + . ID=gene-NDY24_19610;Name=NDY24_19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19610 CP098602.1 Protein Homology CDS 4524922 4528059 . + 0 ID=cds-UUE97916.1;Parent=gene-NDY24_19610;Dbxref=NCBI_GP:UUE97916.1;Name=UUE97916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163390.1;locus_tag=NDY24_19610;product=discoidin domain-containing protein;protein_id=UUE97916.1;transl_table=11 CP098602.1 Genbank gene 4528119 4529042 . + . ID=gene-NDY24_19615;Name=NDY24_19615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19615 CP098602.1 Protein Homology CDS 4528119 4529042 . + 0 ID=cds-UUE97917.1;Parent=gene-NDY24_19615;Dbxref=NCBI_GP:UUE97917.1;Name=UUE97917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904717.1;locus_tag=NDY24_19615;product=endonuclease/exonuclease/phosphatase family protein;protein_id=UUE97917.1;transl_table=11 CP098602.1 Genbank pseudogene 4529173 4530391 . - . ID=gene-NDY24_19620;Name=NDY24_19620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_19620;pseudo=true CP098602.1 Protein Homology CDS 4529173 4530391 . - 0 ID=cds-NDY24_19620;Parent=gene-NDY24_19620;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237613.1;locus_tag=NDY24_19620;product=TraB/GumN family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4530396 4530923 . - . ID=gene-NDY24_19625;Name=NDY24_19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19625 CP098602.1 Protein Homology CDS 4530396 4530923 . - 0 ID=cds-UUF00481.1;Parent=gene-NDY24_19625;Dbxref=NCBI_GP:UUF00481.1;Name=UUF00481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507899.1;locus_tag=NDY24_19625;product=GNAT family N-acetyltransferase;protein_id=UUF00481.1;transl_table=11 CP098602.1 Genbank gene 4530928 4531812 . - . ID=gene-NDY24_19630;Name=NDY24_19630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19630 CP098602.1 Protein Homology CDS 4530928 4531812 . - 0 ID=cds-UUE97918.1;Parent=gene-NDY24_19630;Dbxref=NCBI_GP:UUE97918.1;Name=UUE97918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451810.1;locus_tag=NDY24_19630;product=carbon-nitrogen hydrolase;protein_id=UUE97918.1;transl_table=11 CP098602.1 Genbank gene 4531892 4532926 . - . ID=gene-NDY24_19635;Name=NDY24_19635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19635 CP098602.1 Protein Homology CDS 4531892 4532926 . - 0 ID=cds-UUE97919.1;Parent=gene-NDY24_19635;Dbxref=NCBI_GP:UUE97919.1;Name=UUE97919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372979.1;locus_tag=NDY24_19635;product=agmatine deiminase family protein;protein_id=UUE97919.1;transl_table=11 CP098602.1 Genbank gene 4533018 4533353 . - . ID=gene-NDY24_19640;Name=NDY24_19640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19640 CP098602.1 Protein Homology CDS 4533018 4533353 . - 0 ID=cds-UUE97920.1;Parent=gene-NDY24_19640;Dbxref=NCBI_GP:UUE97920.1;Name=UUE97920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451808.1;locus_tag=NDY24_19640;product=hypothetical protein;protein_id=UUE97920.1;transl_table=11 CP098602.1 Genbank gene 4533613 4533738 . - . ID=gene-NDY24_19645;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=NDY24_19645 CP098602.1 Protein Homology CDS 4533613 4533738 . - 0 ID=cds-UUE97921.1;Parent=gene-NDY24_19645;Dbxref=NCBI_GP:UUE97921.1;Name=UUE97921.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098120.1;locus_tag=NDY24_19645;product=type B 50S ribosomal protein L36;protein_id=UUE97921.1;transl_table=11 CP098602.1 Genbank gene 4533911 4534594 . + . ID=gene-NDY24_19650;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=NDY24_19650 CP098602.1 Protein Homology CDS 4533911 4534594 . + 0 ID=cds-UUE97922.1;Parent=gene-NDY24_19650;Dbxref=NCBI_GP:UUE97922.1;Name=UUE97922.1;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258877.1;locus_tag=NDY24_19650;product=(d)CMP kinase;protein_id=UUE97922.1;transl_table=11 CP098602.1 Genbank gene 4534779 4536467 . + . ID=gene-NDY24_19655;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=NDY24_19655 CP098602.1 Protein Homology CDS 4534779 4536467 . + 0 ID=cds-UUE97923.1;Parent=gene-NDY24_19655;Dbxref=NCBI_GP:UUE97923.1;Name=UUE97923.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019183099.1;locus_tag=NDY24_19655;product=30S ribosomal protein S1;protein_id=UUE97923.1;transl_table=11 CP098602.1 Genbank gene 4536557 4536868 . + . ID=gene-NDY24_19660;Name=NDY24_19660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19660 CP098602.1 Protein Homology CDS 4536557 4536868 . + 0 ID=cds-UUE97924.1;Parent=gene-NDY24_19660;Dbxref=NCBI_GP:UUE97924.1;Name=UUE97924.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408447.1;locus_tag=NDY24_19660;product=integration host factor subunit beta;protein_id=UUE97924.1;transl_table=11 CP098602.1 Genbank pseudogene 4536936 4537238 . + . ID=gene-NDY24_19665;Name=NDY24_19665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_19665;pseudo=true CP098602.1 Protein Homology CDS 4536936 4537238 . + 0 ID=cds-NDY24_19665;Parent=gene-NDY24_19665;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451180.1;locus_tag=NDY24_19665;product=LapA family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4537248 4538426 . + . ID=gene-NDY24_19670;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=NDY24_19670 CP098602.1 Protein Homology CDS 4537248 4538426 . + 0 ID=cds-UUF00482.1;Parent=gene-NDY24_19670;Dbxref=NCBI_GP:UUF00482.1;Name=UUF00482.1;gbkey=CDS;gene=lapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003468665.1;locus_tag=NDY24_19670;product=lipopolysaccharide assembly protein LapB;protein_id=UUF00482.1;transl_table=11 CP098602.1 Genbank gene 4538426 4539400 . + . ID=gene-NDY24_19675;Name=NDY24_19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19675 CP098602.1 Protein Homology CDS 4538426 4539400 . + 0 ID=cds-UUE97925.1;Parent=gene-NDY24_19675;Dbxref=NCBI_GP:UUE97925.1;Name=UUE97925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507893.1;locus_tag=NDY24_19675;product=glycosyltransferase family 4 protein;protein_id=UUE97925.1;transl_table=11 CP098602.1 Genbank gene 4539414 4541321 . + . ID=gene-NDY24_19680;Name=NDY24_19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19680 CP098602.1 Protein Homology CDS 4539414 4541321 . + 0 ID=cds-UUE97926.1;Parent=gene-NDY24_19680;Dbxref=NCBI_GP:UUE97926.1;Name=UUE97926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300130.1;locus_tag=NDY24_19680;product=polysaccharide biosynthesis protein;protein_id=UUE97926.1;transl_table=11 CP098602.1 Genbank gene 4541321 4542214 . + . ID=gene-NDY24_19685;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=NDY24_19685 CP098602.1 Protein Homology CDS 4541321 4542214 . + 0 ID=cds-UUE97927.1;Parent=gene-NDY24_19685;Dbxref=NCBI_GP:UUE97927.1;Name=UUE97927.1;Ontology_term=GO:0009225,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157591.1;locus_tag=NDY24_19685;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=UUE97927.1;transl_table=11 CP098602.1 Genbank gene 4542390 4544246 . + . ID=gene-NDY24_19690;Name=NDY24_19690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19690 CP098602.1 Protein Homology CDS 4542390 4544246 . + 0 ID=cds-UUE97928.1;Parent=gene-NDY24_19690;Dbxref=NCBI_GP:UUE97928.1;Name=UUE97928.1;Ontology_term=GO:0006812,GO:1902600,GO:0005451,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=monovalent cation:proton antiporter activity|0005451||IEA;go_process=cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489640.1;locus_tag=NDY24_19690;product=monovalent cation:proton antiporter-2 (CPA2) family protein;protein_id=UUE97928.1;transl_table=11 CP098602.1 Genbank gene 4544367 4544687 . - . ID=gene-NDY24_19695;Name=NDY24_19695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19695 CP098602.1 Protein Homology CDS 4544367 4544687 . - 0 ID=cds-UUE97929.1;Parent=gene-NDY24_19695;Dbxref=NCBI_GP:UUE97929.1;Name=UUE97929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258887.1;locus_tag=NDY24_19695;product=DUF1244 domain-containing protein;protein_id=UUE97929.1;transl_table=11 CP098602.1 Genbank gene 4544737 4545621 . + . ID=gene-NDY24_19700;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=NDY24_19700 CP098602.1 Protein Homology CDS 4544737 4545621 . + 0 ID=cds-UUE97930.1;Parent=gene-NDY24_19700;Dbxref=NCBI_GP:UUE97930.1;Name=UUE97930.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005992303.1;locus_tag=NDY24_19700;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=UUE97930.1;transl_table=11 CP098602.1 Genbank gene 4545714 4547171 . + . ID=gene-NDY24_19705;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=NDY24_19705 CP098602.1 Protein Homology CDS 4545714 4547171 . + 0 ID=cds-UUE97931.1;Parent=gene-NDY24_19705;Dbxref=NCBI_GP:UUE97931.1;Name=UUE97931.1;Ontology_term=GO:0009152,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004657166.1;locus_tag=NDY24_19705;product=IMP dehydrogenase;protein_id=UUE97931.1;transl_table=11 CP098602.1 Genbank gene 4547298 4548863 . + . ID=gene-NDY24_19710;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=NDY24_19710 CP098602.1 Protein Homology CDS 4547298 4548863 . + 0 ID=cds-UUE97932.1;Parent=gene-NDY24_19710;Dbxref=NCBI_GP:UUE97932.1;Name=UUE97932.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012510808.1;locus_tag=NDY24_19710;product=glutamine-hydrolyzing GMP synthase;protein_id=UUE97932.1;transl_table=11 CP098602.1 Genbank gene 4549171 4550373 . + . ID=gene-NDY24_19715;Name=NDY24_19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19715 CP098602.1 Protein Homology CDS 4549171 4550373 . + 0 ID=cds-UUE97933.1;Parent=gene-NDY24_19715;Dbxref=NCBI_GP:UUE97933.1;Name=UUE97933.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011666563.1;locus_tag=NDY24_19715;product=tyrosine-type recombinase/integrase;protein_id=UUE97933.1;transl_table=11 CP098602.1 Genbank gene 4550654 4550836 . - . ID=gene-NDY24_19720;Name=NDY24_19720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19720 CP098602.1 Protein Homology CDS 4550654 4550836 . - 0 ID=cds-UUE97934.1;Parent=gene-NDY24_19720;Dbxref=NCBI_GP:UUE97934.1;Name=UUE97934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003472506.1;locus_tag=NDY24_19720;product=hypothetical protein;protein_id=UUE97934.1;transl_table=11 CP098602.1 Genbank gene 4551485 4552270 . - . ID=gene-NDY24_19725;Name=NDY24_19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19725 CP098602.1 Protein Homology CDS 4551485 4552270 . - 0 ID=cds-UUE97935.1;Parent=gene-NDY24_19725;Dbxref=NCBI_GP:UUE97935.1;Name=UUE97935.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF013594.2;locus_tag=NDY24_19725;product=M48 family metalloprotease;protein_id=UUE97935.1;transl_table=11 CP098602.1 Genbank gene 4552267 4552731 . - . ID=gene-NDY24_19730;Name=NDY24_19730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19730 CP098602.1 Protein Homology CDS 4552267 4552731 . - 0 ID=cds-UUE97936.1;Parent=gene-NDY24_19730;Dbxref=NCBI_GP:UUE97936.1;Name=UUE97936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450103.1;locus_tag=NDY24_19730;product=hypothetical protein;protein_id=UUE97936.1;transl_table=11 CP098602.1 Genbank pseudogene 4552864 4552962 . - . ID=gene-NDY24_19735;Name=NDY24_19735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_19735;pseudo=true CP098602.1 Protein Homology CDS 4552864 4552962 . - 0 ID=cds-NDY24_19735;Parent=gene-NDY24_19735;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019897068.1;locus_tag=NDY24_19735;product=recombinase family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4553016 4553294 . + . ID=gene-NDY24_19740;Name=NDY24_19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19740 CP098602.1 Protein Homology CDS 4553016 4553294 . + 0 ID=cds-UUE97937.1;Parent=gene-NDY24_19740;Dbxref=NCBI_GP:UUE97937.1;Name=UUE97937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005918295.1;locus_tag=NDY24_19740;product=hypothetical protein;protein_id=UUE97937.1;transl_table=11 CP098602.1 Genbank pseudogene 4553479 4553719 . + . ID=gene-NDY24_19745;Name=NDY24_19745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_19745;pseudo=true CP098602.1 Protein Homology CDS 4553479 4553719 . + 0 ID=cds-NDY24_19745;Parent=gene-NDY24_19745;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159820.1;locus_tag=NDY24_19745;product=KfrA protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4554351 4555370 . + . ID=gene-NDY24_19750;Name=NDY24_19750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19750 CP098602.1 Protein Homology CDS 4554351 4555370 . + 0 ID=cds-UUE97938.1;Parent=gene-NDY24_19750;Dbxref=NCBI_GP:UUE97938.1;Name=UUE97938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974920.1;locus_tag=NDY24_19750;product=ParA family protein;protein_id=UUE97938.1;transl_table=11 CP098602.1 Genbank gene 4555535 4555942 . + . ID=gene-NDY24_19755;Name=NDY24_19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19755 CP098602.1 GeneMarkS-2+ CDS 4555535 4555942 . + 0 ID=cds-UUE97939.1;Parent=gene-NDY24_19755;Dbxref=NCBI_GP:UUE97939.1;Name=UUE97939.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_19755;product=hypothetical protein;protein_id=UUE97939.1;transl_table=11 CP098602.1 Genbank gene 4556424 4556552 . + . ID=gene-NDY24_19760;Name=NDY24_19760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19760 CP098602.1 Protein Homology CDS 4556424 4556552 . + 0 ID=cds-UUF00483.1;Parent=gene-NDY24_19760;Dbxref=NCBI_GP:UUF00483.1;Name=UUF00483.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016876.2;locus_tag=NDY24_19760;product=hypothetical protein;protein_id=UUF00483.1;transl_table=11 CP098602.1 Genbank pseudogene 4556741 4557885 . - . ID=gene-NDY24_19765;Name=NDY24_19765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_19765;pseudo=true CP098602.1 Protein Homology CDS 4556741 4557885 . - 0 ID=cds-NDY24_19765;Parent=gene-NDY24_19765;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=NDY24_19765;product=IS3 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4558070 4561204 . + . ID=gene-NDY24_19770;Name=NDY24_19770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_19770;pseudo=true CP098602.1 Protein Homology CDS 4558070 4561204 . + 0 ID=cds-NDY24_19770;Parent=gene-NDY24_19770;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051651.1;locus_tag=NDY24_19770;product=RHS repeat protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4561308 4562275 . - . ID=gene-NDY24_19775;Name=NDY24_19775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_19775;pseudo=true CP098602.1 Protein Homology CDS 4561308 4562275 . - 0 ID=cds-NDY24_19775;Parent=gene-NDY24_19775;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=NDY24_19775;product=IS5 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4562413 4562673 . + . ID=gene-NDY24_19780;Name=NDY24_19780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_19780;pseudo=true CP098602.1 Protein Homology CDS 4562413 4562673 . + 0 ID=cds-NDY24_19780;Parent=gene-NDY24_19780;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025581.2;locus_tag=NDY24_19780;product=DUF4329 domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4562670 4562909 . + . ID=gene-NDY24_19785;Name=NDY24_19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19785 CP098602.1 GeneMarkS-2+ CDS 4562670 4562909 . + 0 ID=cds-UUE97940.1;Parent=gene-NDY24_19785;Dbxref=NCBI_GP:UUE97940.1;Name=UUE97940.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_19785;product=hypothetical protein;protein_id=UUE97940.1;transl_table=11 CP098602.1 Genbank pseudogene 4563089 4564075 . + . ID=gene-NDY24_19790;Name=NDY24_19790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_19790;pseudo=true CP098602.1 Protein Homology CDS 4563089 4564075 . + 0 ID=cds-NDY24_19790;Parent=gene-NDY24_19790;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448935.1;locus_tag=NDY24_19790;product=RHS repeat-associated core domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4564541 4564789 . + . ID=gene-NDY24_19795;Name=NDY24_19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19795 CP098602.1 GeneMarkS-2+ CDS 4564541 4564789 . + 0 ID=cds-UUE97941.1;Parent=gene-NDY24_19795;Dbxref=NCBI_GP:UUE97941.1;Name=UUE97941.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_19795;product=hypothetical protein;protein_id=UUE97941.1;transl_table=11 CP098602.1 Genbank pseudogene 4565622 4566300 . - . ID=gene-NDY24_19800;Name=NDY24_19800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_19800;pseudo=true CP098602.1 Protein Homology CDS 4565622 4566300 . - 0 ID=cds-NDY24_19800;Parent=gene-NDY24_19800;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174107.1;locus_tag=NDY24_19800;product=site-specific integrase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4566994 4567353 . - . ID=gene-NDY24_19805;Name=NDY24_19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19805 CP098602.1 GeneMarkS-2+ CDS 4566994 4567353 . - 0 ID=cds-UUE97942.1;Parent=gene-NDY24_19805;Dbxref=NCBI_GP:UUE97942.1;Name=UUE97942.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_19805;product=hypothetical protein;protein_id=UUE97942.1;transl_table=11 CP098602.1 Genbank pseudogene 4567526 4568634 . - . ID=gene-NDY24_19810;Name=NDY24_19810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_19810;pseudo=true CP098602.1 Protein Homology CDS 4567526 4568634 . - 0 ID=cds-NDY24_19810;Parent=gene-NDY24_19810;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611839.1;locus_tag=NDY24_19810;product=IS3 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4568652 4568906 . - . ID=gene-NDY24_19815;Name=NDY24_19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19815 CP098602.1 GeneMarkS-2+ CDS 4568652 4568906 . - 0 ID=cds-UUE97943.1;Parent=gene-NDY24_19815;Dbxref=NCBI_GP:UUE97943.1;Name=UUE97943.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_19815;product=hypothetical protein;protein_id=UUE97943.1;transl_table=11 CP098602.1 Genbank gene 4568983 4576185 . - . ID=gene-NDY24_19820;Name=NDY24_19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19820 CP098602.1 GeneMarkS-2+ CDS 4568983 4576185 . - 0 ID=cds-UUE97944.1;Parent=gene-NDY24_19820;Dbxref=NCBI_GP:UUE97944.1;Name=UUE97944.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_19820;product=hypothetical protein;protein_id=UUE97944.1;transl_table=11 CP098602.1 Genbank gene 4576196 4576687 . - . ID=gene-NDY24_19825;Name=NDY24_19825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19825 CP098602.1 GeneMarkS-2+ CDS 4576196 4576687 . - 0 ID=cds-UUE97945.1;Parent=gene-NDY24_19825;Dbxref=NCBI_GP:UUE97945.1;Name=UUE97945.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_19825;product=hypothetical protein;protein_id=UUE97945.1;transl_table=11 CP098602.1 Genbank gene 4576641 4577000 . - . ID=gene-NDY24_19830;Name=NDY24_19830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19830 CP098602.1 GeneMarkS-2+ CDS 4576641 4577000 . - 0 ID=cds-UUE97946.1;Parent=gene-NDY24_19830;Dbxref=NCBI_GP:UUE97946.1;Name=UUE97946.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_19830;product=hypothetical protein;protein_id=UUE97946.1;transl_table=11 CP098602.1 Genbank gene 4576997 4580599 . - . ID=gene-NDY24_19835;Name=NDY24_19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19835 CP098602.1 GeneMarkS-2+ CDS 4576997 4580599 . - 0 ID=cds-UUE97947.1;Parent=gene-NDY24_19835;Dbxref=NCBI_GP:UUE97947.1;Name=UUE97947.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_19835;product=hypothetical protein;protein_id=UUE97947.1;transl_table=11 CP098602.1 Genbank gene 4580790 4581185 . - . ID=gene-NDY24_19840;Name=NDY24_19840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19840 CP098602.1 GeneMarkS-2+ CDS 4580790 4581185 . - 0 ID=cds-UUE97948.1;Parent=gene-NDY24_19840;Dbxref=NCBI_GP:UUE97948.1;Name=UUE97948.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_19840;product=hypothetical protein;protein_id=UUE97948.1;transl_table=11 CP098602.1 Genbank gene 4581466 4581813 . - . ID=gene-NDY24_19845;Name=NDY24_19845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19845 CP098602.1 GeneMarkS-2+ CDS 4581466 4581813 . - 0 ID=cds-UUE97949.1;Parent=gene-NDY24_19845;Dbxref=NCBI_GP:UUE97949.1;Name=UUE97949.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_19845;product=hypothetical protein;protein_id=UUE97949.1;transl_table=11 CP098602.1 Genbank gene 4582125 4584236 . - . ID=gene-NDY24_19850;Name=NDY24_19850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19850 CP098602.1 Protein Homology CDS 4582125 4584236 . - 0 ID=cds-UUE97950.1;Parent=gene-NDY24_19850;Dbxref=NCBI_GP:UUE97950.1;Name=UUE97950.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155045.1;locus_tag=NDY24_19850;product=methyl-accepting chemotaxis protein;protein_id=UUE97950.1;transl_table=11 CP098602.1 Genbank gene 4584510 4585694 . - . ID=gene-NDY24_19855;Name=NDY24_19855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19855 CP098602.1 Protein Homology CDS 4584510 4585694 . - 0 ID=cds-UUE97951.1;Parent=gene-NDY24_19855;Dbxref=NCBI_GP:UUE97951.1;Name=UUE97951.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450353.1;locus_tag=NDY24_19855;product=FAD-dependent monooxygenase;protein_id=UUE97951.1;transl_table=11 CP098602.1 Genbank gene 4585731 4586195 . - . ID=gene-NDY24_19860;Name=NDY24_19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19860 CP098602.1 Protein Homology CDS 4585731 4586195 . - 0 ID=cds-UUE97952.1;Parent=gene-NDY24_19860;Dbxref=NCBI_GP:UUE97952.1;Name=UUE97952.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964087.1;locus_tag=NDY24_19860;product=MarR family transcriptional regulator;protein_id=UUE97952.1;transl_table=11 CP098602.1 Genbank gene 4586667 4589525 . + . ID=gene-NDY24_19865;Name=NDY24_19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19865 CP098602.1 Protein Homology CDS 4586667 4589525 . + 0 ID=cds-UUE97953.1;Parent=gene-NDY24_19865;Dbxref=NCBI_GP:UUE97953.1;Name=UUE97953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155050.1;locus_tag=NDY24_19865;product=PAS domain-containing protein;protein_id=UUE97953.1;transl_table=11 CP098602.1 Genbank gene 4589565 4589909 . - . ID=gene-NDY24_19870;Name=NDY24_19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19870 CP098602.1 Protein Homology CDS 4589565 4589909 . - 0 ID=cds-UUF00484.1;Parent=gene-NDY24_19870;Dbxref=NCBI_GP:UUF00484.1;Name=UUF00484.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155051.1;locus_tag=NDY24_19870;product=response regulator;protein_id=UUF00484.1;transl_table=11 CP098602.1 Genbank gene 4590166 4591680 . + . ID=gene-NDY24_19875;Name=NDY24_19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19875 CP098602.1 Protein Homology CDS 4590166 4591680 . + 0 ID=cds-UUE97954.1;Parent=gene-NDY24_19875;Dbxref=NCBI_GP:UUE97954.1;Name=UUE97954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964093.1;locus_tag=NDY24_19875;product=AAA family ATPase;protein_id=UUE97954.1;transl_table=11 CP098602.1 Genbank gene 4591667 4593739 . + . ID=gene-NDY24_19880;Name=NDY24_19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19880 CP098602.1 Protein Homology CDS 4591667 4593739 . + 0 ID=cds-UUE97955.1;Parent=gene-NDY24_19880;Dbxref=NCBI_GP:UUE97955.1;Name=UUE97955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964094.1;locus_tag=NDY24_19880;product=ATP-binding protein;protein_id=UUE97955.1;transl_table=11 CP098602.1 Genbank gene 4594443 4595165 . - . ID=gene-NDY24_19885;Name=NDY24_19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19885 CP098602.1 Protein Homology CDS 4594443 4595165 . - 0 ID=cds-UUE97956.1;Parent=gene-NDY24_19885;Dbxref=NCBI_GP:UUE97956.1;Name=UUE97956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167280.1;locus_tag=NDY24_19885;product=tetratricopeptide repeat protein;protein_id=UUE97956.1;transl_table=11 CP098602.1 Genbank gene 4595159 4595641 . - . ID=gene-NDY24_19890;Name=NDY24_19890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19890 CP098602.1 Protein Homology CDS 4595159 4595641 . - 0 ID=cds-UUE97957.1;Parent=gene-NDY24_19890;Dbxref=NCBI_GP:UUE97957.1;Name=UUE97957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904802.1;locus_tag=NDY24_19890;product=cytochrome c-type biogenesis protein CcmH;protein_id=UUE97957.1;transl_table=11 CP098602.1 Genbank gene 4595641 4596183 . - . ID=gene-NDY24_19895;Name=NDY24_19895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19895 CP098602.1 Protein Homology CDS 4595641 4596183 . - 0 ID=cds-UUE97958.1;Parent=gene-NDY24_19895;Dbxref=NCBI_GP:UUE97958.1;Name=UUE97958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452994.1;locus_tag=NDY24_19895;product=DsbE family thiol:disulfide interchange protein;protein_id=UUE97958.1;transl_table=11 CP098602.1 Genbank gene 4596180 4598168 . - . ID=gene-NDY24_19900;Name=NDY24_19900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19900 CP098602.1 Protein Homology CDS 4596180 4598168 . - 0 ID=cds-UUE97959.1;Parent=gene-NDY24_19900;Dbxref=NCBI_GP:UUE97959.1;Name=UUE97959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452993.1;locus_tag=NDY24_19900;product=heme lyase CcmF/NrfE family subunit;protein_id=UUE97959.1;transl_table=11 CP098602.1 Genbank gene 4598232 4598702 . - . ID=gene-NDY24_19905;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=NDY24_19905 CP098602.1 Protein Homology CDS 4598232 4598702 . - 0 ID=cds-UUE97960.1;Parent=gene-NDY24_19905;Dbxref=NCBI_GP:UUE97960.1;Name=UUE97960.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155058.1;locus_tag=NDY24_19905;product=cytochrome c maturation protein CcmE;protein_id=UUE97960.1;transl_table=11 CP098602.1 Genbank gene 4598699 4598905 . - . ID=gene-NDY24_19910;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=NDY24_19910 CP098602.1 Protein Homology CDS 4598699 4598905 . - 0 ID=cds-UUE97961.1;Parent=gene-NDY24_19910;Dbxref=NCBI_GP:UUE97961.1;Name=UUE97961.1;Ontology_term=GO:0015886,GO:0017004,GO:0016021;gbkey=CDS;gene=ccmD;go_component=integral component of membrane|0016021||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155059.1;locus_tag=NDY24_19910;product=heme exporter protein CcmD;protein_id=UUE97961.1;transl_table=11 CP098602.1 Genbank gene 4598902 4599660 . - . ID=gene-NDY24_19915;Name=ccmC;gbkey=Gene;gene=ccmC;gene_biotype=protein_coding;locus_tag=NDY24_19915 CP098602.1 Protein Homology CDS 4598902 4599660 . - 0 ID=cds-UUE97962.1;Parent=gene-NDY24_19915;Dbxref=NCBI_GP:UUE97962.1;Name=UUE97962.1;Ontology_term=GO:0015886,GO:0015232,GO:0016020;gbkey=CDS;gene=ccmC;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302345.1;locus_tag=NDY24_19915;product=heme ABC transporter permease CcmC;protein_id=UUE97962.1;transl_table=11 CP098602.1 Genbank gene 4599671 4600999 . - . ID=gene-NDY24_19920;Name=NDY24_19920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19920 CP098602.1 Protein Homology CDS 4599671 4600999 . - 0 ID=cds-UUE97963.1;Parent=gene-NDY24_19920;Dbxref=NCBI_GP:UUE97963.1;Name=UUE97963.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363686.1;locus_tag=NDY24_19920;product=S8 family serine peptidase;protein_id=UUE97963.1;transl_table=11 CP098602.1 Genbank gene 4600996 4601655 . - . ID=gene-NDY24_19925;Name=NDY24_19925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19925 CP098602.1 Protein Homology CDS 4600996 4601655 . - 0 ID=cds-UUE97964.1;Parent=gene-NDY24_19925;Dbxref=NCBI_GP:UUE97964.1;Name=UUE97964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169443.1;locus_tag=NDY24_19925;product=zf-HC2 domain-containing protein;protein_id=UUE97964.1;transl_table=11 CP098602.1 Genbank gene 4601652 4602233 . - . ID=gene-NDY24_19930;Name=NDY24_19930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19930 CP098602.1 Protein Homology CDS 4601652 4602233 . - 0 ID=cds-UUE97965.1;Parent=gene-NDY24_19930;Dbxref=NCBI_GP:UUE97965.1;Name=UUE97965.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription%2C initiation|0006352||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005919646.1;locus_tag=NDY24_19930;product=sigma-70 family RNA polymerase sigma factor;protein_id=UUE97965.1;transl_table=11 CP098602.1 Genbank gene 4602297 4603004 . - . ID=gene-NDY24_19935;Name=NDY24_19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19935 CP098602.1 Protein Homology CDS 4602297 4603004 . - 0 ID=cds-UUE97966.1;Parent=gene-NDY24_19935;Dbxref=NCBI_GP:UUE97966.1;Name=UUE97966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914841.1;locus_tag=NDY24_19935;product=hypothetical protein;protein_id=UUE97966.1;transl_table=11 CP098602.1 Genbank gene 4603344 4603733 . - . ID=gene-NDY24_19940;Name=NDY24_19940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19940 CP098602.1 Protein Homology CDS 4603344 4603733 . - 0 ID=cds-UUE97967.1;Parent=gene-NDY24_19940;Dbxref=NCBI_GP:UUE97967.1;Name=UUE97967.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902092.1;locus_tag=NDY24_19940;product=c-type cytochrome;protein_id=UUE97967.1;transl_table=11 CP098602.1 Genbank gene 4603759 4605111 . - . ID=gene-NDY24_19945;Name=NDY24_19945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19945 CP098602.1 Protein Homology CDS 4603759 4605111 . - 0 ID=cds-UUE97968.1;Parent=gene-NDY24_19945;Dbxref=NCBI_GP:UUE97968.1;Name=UUE97968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914948.1;locus_tag=NDY24_19945;product=cytochrome C;protein_id=UUE97968.1;transl_table=11 CP098602.1 Genbank gene 4605183 4605797 . - . ID=gene-NDY24_19950;Name=NDY24_19950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19950 CP098602.1 Protein Homology CDS 4605183 4605797 . - 0 ID=cds-UUE97969.1;Parent=gene-NDY24_19950;Dbxref=NCBI_GP:UUE97969.1;Name=UUE97969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452984.1;locus_tag=NDY24_19950;product=cytochrome b;protein_id=UUE97969.1;transl_table=11 CP098602.1 Genbank gene 4606106 4606543 . + . ID=gene-NDY24_19955;Name=NDY24_19955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19955 CP098602.1 Protein Homology CDS 4606106 4606543 . + 0 ID=cds-UUE97970.1;Parent=gene-NDY24_19955;Dbxref=NCBI_GP:UUE97970.1;Name=UUE97970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914950.1;locus_tag=NDY24_19955;product=FdtA/QdtA family cupin domain-containing protein;protein_id=UUE97970.1;transl_table=11 CP098602.1 Genbank gene 4606540 4607211 . + . ID=gene-NDY24_19960;Name=NDY24_19960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19960 CP098602.1 Protein Homology CDS 4606540 4607211 . + 0 ID=cds-UUE97971.1;Parent=gene-NDY24_19960;Dbxref=NCBI_GP:UUE97971.1;Name=UUE97971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966838.1;locus_tag=NDY24_19960;product=acetyltransferase;protein_id=UUE97971.1;transl_table=11 CP098602.1 Genbank gene 4607215 4608168 . + . ID=gene-NDY24_19965;Name=NDY24_19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19965 CP098602.1 Protein Homology CDS 4607215 4608168 . + 0 ID=cds-UUE97972.1;Parent=gene-NDY24_19965;Dbxref=NCBI_GP:UUE97972.1;Name=UUE97972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155068.1;locus_tag=NDY24_19965;product=hypothetical protein;protein_id=UUE97972.1;transl_table=11 CP098602.1 Genbank gene 4608155 4609087 . + . ID=gene-NDY24_19970;Name=NDY24_19970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19970 CP098602.1 Protein Homology CDS 4608155 4609087 . + 0 ID=cds-UUE97973.1;Parent=gene-NDY24_19970;Dbxref=NCBI_GP:UUE97973.1;Name=UUE97973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408912.1;locus_tag=NDY24_19970;product=GNAT family N-acetyltransferase;protein_id=UUE97973.1;transl_table=11 CP098602.1 Genbank gene 4609075 4610199 . + . ID=gene-NDY24_19975;Name=NDY24_19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19975 CP098602.1 Protein Homology CDS 4609075 4610199 . + 0 ID=cds-UUE97974.1;Parent=gene-NDY24_19975;Dbxref=NCBI_GP:UUE97974.1;Name=UUE97974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452982.1;locus_tag=NDY24_19975;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=UUE97974.1;transl_table=11 CP098602.1 Genbank gene 4610196 4611449 . + . ID=gene-NDY24_19980;Name=NDY24_19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19980 CP098602.1 Protein Homology CDS 4610196 4611449 . + 0 ID=cds-UUE97975.1;Parent=gene-NDY24_19980;Dbxref=NCBI_GP:UUE97975.1;Name=UUE97975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089953.1;locus_tag=NDY24_19980;product=O-antigen translocase;protein_id=UUE97975.1;transl_table=11 CP098602.1 Genbank gene 4611446 4612396 . + . ID=gene-NDY24_19985;Name=NDY24_19985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19985 CP098602.1 Protein Homology CDS 4611446 4612396 . + 0 ID=cds-UUE97976.1;Parent=gene-NDY24_19985;Dbxref=NCBI_GP:UUE97976.1;Name=UUE97976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503699.1;locus_tag=NDY24_19985;product=glycosyltransferase;protein_id=UUE97976.1;transl_table=11 CP098602.1 Genbank gene 4612393 4613526 . + . ID=gene-NDY24_19990;Name=NDY24_19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19990 CP098602.1 Protein Homology CDS 4612393 4613526 . + 0 ID=cds-UUE97977.1;Parent=gene-NDY24_19990;Dbxref=NCBI_GP:UUE97977.1;Name=UUE97977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924253.1;locus_tag=NDY24_19990;product=hypothetical protein;protein_id=UUE97977.1;transl_table=11 CP098602.1 Genbank gene 4613571 4614422 . + . ID=gene-NDY24_19995;Name=NDY24_19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_19995 CP098602.1 Protein Homology CDS 4613571 4614422 . + 0 ID=cds-UUE97978.1;Parent=gene-NDY24_19995;Dbxref=NCBI_GP:UUE97978.1;Name=UUE97978.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452976.1;locus_tag=NDY24_19995;product=Wzz/FepE/Etk N-terminal domain-containing protein;protein_id=UUE97978.1;transl_table=11 CP098602.1 Genbank gene 4614580 4615422 . + . ID=gene-NDY24_20000;Name=NDY24_20000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20000 CP098602.1 Protein Homology CDS 4614580 4615422 . + 0 ID=cds-UUE97979.1;Parent=gene-NDY24_20000;Dbxref=NCBI_GP:UUE97979.1;Name=UUE97979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966827.1;locus_tag=NDY24_20000;product=class I SAM-dependent methyltransferase;protein_id=UUE97979.1;transl_table=11 CP098602.1 Genbank pseudogene 4615435 4616652 . + . ID=gene-NDY24_20005;Name=NDY24_20005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_20005;pseudo=true CP098602.1 Protein Homology CDS 4615435 4616652 . + 0 ID=cds-NDY24_20005;Parent=gene-NDY24_20005;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159163.1;locus_tag=NDY24_20005;product=amidohydrolase family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4616619 4617350 . + . ID=gene-NDY24_20010;Name=NDY24_20010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20010 CP098602.1 Protein Homology CDS 4616619 4617350 . + 0 ID=cds-UUF00485.1;Parent=gene-NDY24_20010;Dbxref=NCBI_GP:UUF00485.1;Name=UUF00485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155076.1;locus_tag=NDY24_20010;product=class I SAM-dependent methyltransferase;protein_id=UUF00485.1;transl_table=11 CP098602.1 Genbank pseudogene 4617487 4618578 . + . ID=gene-NDY24_20015;Name=NDY24_20015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_20015;pseudo=true CP098602.1 Protein Homology CDS 4617487 4618578 . + 0 ID=cds-NDY24_20015;Parent=gene-NDY24_20015;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155077.1;locus_tag=NDY24_20015;product=glycosyltransferase family 4 protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4618618 4619730 . + . ID=gene-NDY24_20020;Name=NDY24_20020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20020 CP098602.1 Protein Homology CDS 4618618 4619730 . + 0 ID=cds-UUF00486.1;Parent=gene-NDY24_20020;Dbxref=NCBI_GP:UUF00486.1;Name=UUF00486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452971.1;locus_tag=NDY24_20020;product=glycosyltransferase family 4 protein;protein_id=UUF00486.1;transl_table=11 CP098602.1 Genbank pseudogene 4620324 4621538 . - . ID=gene-NDY24_20025;Name=NDY24_20025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_20025;pseudo=true CP098602.1 Protein Homology CDS 4620324 4621538 . - 0 ID=cds-NDY24_20025;Parent=gene-NDY24_20025;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453082.1;locus_tag=NDY24_20025;product=nucleotidyltransferase family protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4621599 4623153 . - . ID=gene-NDY24_20030;Name=NDY24_20030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_20030;pseudo=true CP098602.1 Protein Homology CDS 4621599 4623153 . - 0 ID=cds-NDY24_20030;Parent=gene-NDY24_20030;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851562.1;locus_tag=NDY24_20030;product=radical SAM protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4623308 4624369 . + . ID=gene-NDY24_20035;Name=NDY24_20035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20035 CP098602.1 Protein Homology CDS 4623308 4624369 . + 0 ID=cds-UUE97980.1;Parent=gene-NDY24_20035;Dbxref=NCBI_GP:UUE97980.1;Name=UUE97980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408904.1;locus_tag=NDY24_20035;product=serine kinase;protein_id=UUE97980.1;transl_table=11 CP098602.1 Genbank gene 4624454 4626178 . + . ID=gene-NDY24_20040;Name=NDY24_20040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20040 CP098602.1 Protein Homology CDS 4624454 4626178 . + 0 ID=cds-UUE97981.1;Parent=gene-NDY24_20040;Dbxref=NCBI_GP:UUE97981.1;Name=UUE97981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453079.1;locus_tag=NDY24_20040;product=ABC transporter ATP-binding protein/permease;protein_id=UUE97981.1;transl_table=11 CP098602.1 Genbank gene 4626211 4627623 . - . ID=gene-NDY24_20045;Name=NDY24_20045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20045 CP098602.1 Protein Homology CDS 4626211 4627623 . - 0 ID=cds-UUE97982.1;Parent=gene-NDY24_20045;Dbxref=NCBI_GP:UUE97982.1;Name=UUE97982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452788.1;locus_tag=NDY24_20045;product=MFS transporter;protein_id=UUE97982.1;transl_table=11 CP098602.1 Genbank gene 4628068 4629069 . + . ID=gene-NDY24_20050;Name=NDY24_20050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20050 CP098602.1 Protein Homology CDS 4628068 4629069 . + 0 ID=cds-UUE97983.1;Parent=gene-NDY24_20050;Dbxref=NCBI_GP:UUE97983.1;Name=UUE97983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155084.1;locus_tag=NDY24_20050;product=LLM class flavin-dependent oxidoreductase;protein_id=UUE97983.1;transl_table=11 CP098602.1 Genbank gene 4629130 4629630 . + . ID=gene-NDY24_20055;Name=NDY24_20055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20055 CP098602.1 Protein Homology CDS 4629130 4629630 . + 0 ID=cds-UUE97984.1;Parent=gene-NDY24_20055;Dbxref=NCBI_GP:UUE97984.1;Name=UUE97984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966811.1;locus_tag=NDY24_20055;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=UUE97984.1;transl_table=11 CP098602.1 Genbank gene 4629666 4630337 . - . ID=gene-NDY24_20060;Name=NDY24_20060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20060 CP098602.1 Protein Homology CDS 4629666 4630337 . - 0 ID=cds-UUE97985.1;Parent=gene-NDY24_20060;Dbxref=NCBI_GP:UUE97985.1;Name=UUE97985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301803.1;locus_tag=NDY24_20060;product=exopolysaccharide biosynthesis protein;protein_id=UUE97985.1;transl_table=11 CP098602.1 Genbank gene 4630321 4631661 . - . ID=gene-NDY24_20065;Name=NDY24_20065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20065 CP098602.1 Protein Homology CDS 4630321 4631661 . - 0 ID=cds-UUE97986.1;Parent=gene-NDY24_20065;Dbxref=NCBI_GP:UUE97986.1;Name=UUE97986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051102.1;locus_tag=NDY24_20065;product=hemolysin family protein;protein_id=UUE97986.1;transl_table=11 CP098602.1 Genbank gene 4631936 4632562 . + . ID=gene-NDY24_20070;Name=NDY24_20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20070 CP098602.1 Protein Homology CDS 4631936 4632562 . + 0 ID=cds-UUE97987.1;Parent=gene-NDY24_20070;Dbxref=NCBI_GP:UUE97987.1;Name=UUE97987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005992439.1;locus_tag=NDY24_20070;product=pit accessory protein;protein_id=UUE97987.1;transl_table=11 CP098602.1 Genbank gene 4632572 4633699 . + . ID=gene-NDY24_20075;Name=NDY24_20075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20075 CP098602.1 Protein Homology CDS 4632572 4633699 . + 0 ID=cds-UUE97988.1;Parent=gene-NDY24_20075;Dbxref=NCBI_GP:UUE97988.1;Name=UUE97988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914989.1;locus_tag=NDY24_20075;product=inorganic phosphate transporter;protein_id=UUE97988.1;transl_table=11 CP098602.1 Genbank gene 4633822 4634583 . + . ID=gene-NDY24_20080;Name=NDY24_20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20080 CP098602.1 Protein Homology CDS 4633822 4634583 . + 0 ID=cds-UUE97989.1;Parent=gene-NDY24_20080;Dbxref=NCBI_GP:UUE97989.1;Name=UUE97989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155090.1;locus_tag=NDY24_20080;product=YdcF family protein;protein_id=UUE97989.1;transl_table=11 CP098602.1 Genbank gene 4634842 4636356 . - . ID=gene-NDY24_20085;Name=NDY24_20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20085 CP098602.1 Protein Homology CDS 4634842 4636356 . - 0 ID=cds-UUE97990.1;Parent=gene-NDY24_20085;Dbxref=NCBI_GP:UUE97990.1;Name=UUE97990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005919581.1;locus_tag=NDY24_20085;product=S10 family peptidase;protein_id=UUE97990.1;transl_table=11 CP098602.1 Genbank gene 4636843 4638732 . - . ID=gene-NDY24_20090;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=NDY24_20090 CP098602.1 Protein Homology CDS 4636843 4638732 . - 0 ID=cds-UUE97991.1;Parent=gene-NDY24_20090;Dbxref=NCBI_GP:UUE97991.1;Name=UUE97991.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parE;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237730.1;locus_tag=NDY24_20090;product=DNA topoisomerase IV subunit B;protein_id=UUE97991.1;transl_table=11 CP098602.1 Genbank gene 4638894 4639136 . + . ID=gene-NDY24_20095;Name=NDY24_20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20095 CP098602.1 Protein Homology CDS 4638894 4639136 . + 0 ID=cds-UUE97992.1;Parent=gene-NDY24_20095;Dbxref=NCBI_GP:UUE97992.1;Name=UUE97992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481819.1;locus_tag=NDY24_20095;product=hypothetical protein;protein_id=UUE97992.1;transl_table=11 CP098602.1 Genbank gene 4639326 4640990 . + . ID=gene-NDY24_20100;Name=NDY24_20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20100 CP098602.1 Protein Homology CDS 4639326 4640990 . + 0 ID=cds-UUE97993.1;Parent=gene-NDY24_20100;Dbxref=NCBI_GP:UUE97993.1;Name=UUE97993.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481821.1;locus_tag=NDY24_20100;product=CTP synthase;protein_id=UUE97993.1;transl_table=11 CP098602.1 Genbank gene 4641151 4641981 . + . ID=gene-NDY24_20105;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=NDY24_20105 CP098602.1 Protein Homology CDS 4641151 4641981 . + 0 ID=cds-UUE97994.1;Parent=gene-NDY24_20105;Dbxref=NCBI_GP:UUE97994.1;Name=UUE97994.1;Ontology_term=GO:0009058,GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005992423.1;locus_tag=NDY24_20105;product=3-deoxy-8-phosphooctulonate synthase;protein_id=UUE97994.1;transl_table=11 CP098602.1 Genbank gene 4641978 4642340 . + . ID=gene-NDY24_20110;Name=NDY24_20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20110 CP098602.1 Protein Homology CDS 4641978 4642340 . + 0 ID=cds-UUE97995.1;Parent=gene-NDY24_20110;Dbxref=NCBI_GP:UUE97995.1;Name=UUE97995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453320.1;locus_tag=NDY24_20110;product=hypothetical protein;protein_id=UUE97995.1;transl_table=11 CP098602.1 Genbank gene 4642457 4643758 . + . ID=gene-NDY24_20115;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=NDY24_20115 CP098602.1 Protein Homology CDS 4642457 4643758 . + 0 ID=cds-UUF00487.1;Parent=gene-NDY24_20115;Dbxref=NCBI_GP:UUF00487.1;Name=UUF00487.1;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002808113.1;locus_tag=NDY24_20115;product=phosphopyruvate hydratase;protein_id=UUF00487.1;transl_table=11 CP098602.1 Genbank gene 4643762 4644124 . + . ID=gene-NDY24_20120;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=NDY24_20120 CP098602.1 Protein Homology CDS 4643762 4644124 . + 0 ID=cds-UUE97996.1;Parent=gene-NDY24_20120;Dbxref=NCBI_GP:UUE97996.1;Name=UUE97996.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259528.1;locus_tag=NDY24_20120;product=cell division protein FtsB;protein_id=UUE97996.1;transl_table=11 CP098602.1 Genbank gene 4644121 4644894 . + . ID=gene-NDY24_20125;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=NDY24_20125 CP098602.1 Protein Homology CDS 4644121 4644894 . + 0 ID=cds-UUE97997.1;Parent=gene-NDY24_20125;Dbxref=NCBI_GP:UUE97997.1;Name=UUE97997.1;Ontology_term=GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507477.1;locus_tag=NDY24_20125;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=UUE97997.1;transl_table=11 CP098602.1 Genbank gene 4645042 4645533 . + . ID=gene-NDY24_20130;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=NDY24_20130 CP098602.1 Protein Homology CDS 4645042 4645533 . + 0 ID=cds-UUE97998.1;Parent=gene-NDY24_20130;Dbxref=NCBI_GP:UUE97998.1;Name=UUE97998.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453316.1;locus_tag=NDY24_20130;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=UUE97998.1;transl_table=11 CP098602.1 Genbank gene 4645768 4646871 . + . ID=gene-NDY24_20135;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=NDY24_20135 CP098602.1 Protein Homology CDS 4645768 4646871 . + 0 ID=cds-UUE97999.1;Parent=gene-NDY24_20135;Dbxref=NCBI_GP:UUE97999.1;Name=UUE97999.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453315.1;locus_tag=NDY24_20135;product=tRNA pseudouridine(13) synthase TruD;protein_id=UUE97999.1;transl_table=11 CP098602.1 Genbank gene 4646996 4647535 . - . ID=gene-NDY24_20140;Name=NDY24_20140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20140 CP098602.1 Protein Homology CDS 4646996 4647535 . - 0 ID=cds-UUE98000.1;Parent=gene-NDY24_20140;Dbxref=NCBI_GP:UUE98000.1;Name=UUE98000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237727.1;locus_tag=NDY24_20140;product=Smr/MutS family protein;protein_id=UUE98000.1;transl_table=11 CP098602.1 Genbank gene 4647635 4648414 . + . ID=gene-NDY24_20145;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=NDY24_20145 CP098602.1 Protein Homology CDS 4647635 4648414 . + 0 ID=cds-UUE98001.1;Parent=gene-NDY24_20145;Dbxref=NCBI_GP:UUE98001.1;Name=UUE98001.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305385.1;locus_tag=NDY24_20145;product=5'/3'-nucleotidase SurE;protein_id=UUE98001.1;transl_table=11 CP098602.1 Genbank gene 4648411 4649091 . + . ID=gene-NDY24_20150;Name=NDY24_20150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20150 CP098602.1 Protein Homology CDS 4648411 4649091 . + 0 ID=cds-UUE98002.1;Parent=gene-NDY24_20150;Dbxref=NCBI_GP:UUE98002.1;Name=UUE98002.1;Ontology_term=GO:0006464,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=cellular protein modification process|0006464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503664.1;locus_tag=NDY24_20150;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=UUE98002.1;transl_table=11 CP098602.1 Genbank gene 4649110 4649724 . + . ID=gene-NDY24_20155;Name=NDY24_20155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20155 CP098602.1 Protein Homology CDS 4649110 4649724 . + 0 ID=cds-UUE98003.1;Parent=gene-NDY24_20155;Dbxref=NCBI_GP:UUE98003.1;Name=UUE98003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481846.1;locus_tag=NDY24_20155;product=DedA family protein;protein_id=UUE98003.1;transl_table=11 CP098602.1 Genbank gene 4649721 4650494 . + . ID=gene-NDY24_20160;Name=NDY24_20160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20160 CP098602.1 Protein Homology CDS 4649721 4650494 . + 0 ID=cds-UUE98004.1;Parent=gene-NDY24_20160;Dbxref=NCBI_GP:UUE98004.1;Name=UUE98004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481848.1;locus_tag=NDY24_20160;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=UUE98004.1;transl_table=11 CP098602.1 Genbank gene 4650664 4651044 . - . ID=gene-NDY24_20165;Name=NDY24_20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20165 CP098602.1 Protein Homology CDS 4650664 4651044 . - 0 ID=cds-UUE98005.1;Parent=gene-NDY24_20165;Dbxref=NCBI_GP:UUE98005.1;Name=UUE98005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904007.1;locus_tag=NDY24_20165;product=Mth938-like domain-containing protein;protein_id=UUE98005.1;transl_table=11 CP098602.1 Genbank gene 4651060 4651365 . - . ID=gene-NDY24_20170;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=NDY24_20170 CP098602.1 Protein Homology CDS 4651060 4651365 . - 0 ID=cds-UUE98006.1;Parent=gene-NDY24_20170;Dbxref=NCBI_GP:UUE98006.1;Name=UUE98006.1;Ontology_term=GO:0008150,GO:0003723,GO:0005737;gbkey=CDS;gene=yhbY;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300317.1;locus_tag=NDY24_20170;product=ribosome assembly RNA-binding protein YhbY;protein_id=UUE98006.1;transl_table=11 CP098602.1 Genbank gene 4651431 4652063 . + . ID=gene-NDY24_20175;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=NDY24_20175 CP098602.1 Protein Homology CDS 4651431 4652063 . + 0 ID=cds-UUE98007.1;Parent=gene-NDY24_20175;Dbxref=NCBI_GP:UUE98007.1;Name=UUE98007.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924322.1;locus_tag=NDY24_20175;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=UUE98007.1;transl_table=11 CP098602.1 Genbank gene 4652125 4654065 . + . ID=gene-NDY24_20180;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=NDY24_20180 CP098602.1 Protein Homology CDS 4652125 4654065 . + 0 ID=cds-UUE98008.1;Parent=gene-NDY24_20180;Dbxref=NCBI_GP:UUE98008.1;Name=UUE98008.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887;gbkey=CDS;gene=ftsH;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481854.1;locus_tag=NDY24_20180;product=ATP-dependent zinc metalloprotease FtsH;protein_id=UUE98008.1;transl_table=11 CP098602.1 Genbank gene 4654275 4655177 . + . ID=gene-NDY24_20185;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=NDY24_20185 CP098602.1 Protein Homology CDS 4654275 4655177 . + 0 ID=cds-UUE98009.1;Parent=gene-NDY24_20185;Dbxref=NCBI_GP:UUE98009.1;Name=UUE98009.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453304.1;locus_tag=NDY24_20185;product=dihydropteroate synthase;protein_id=UUE98009.1;transl_table=11 CP098602.1 Genbank gene 4655177 4656160 . + . ID=gene-NDY24_20190;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=NDY24_20190 CP098602.1 Protein Homology CDS 4655177 4656160 . + 0 ID=cds-UUE98010.1;Parent=gene-NDY24_20190;Dbxref=NCBI_GP:UUE98010.1;Name=UUE98010.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155109.1;locus_tag=NDY24_20190;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=UUE98010.1;transl_table=11 CP098602.1 Genbank gene 4656238 4656516 . + . ID=gene-NDY24_20195;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=NDY24_20195 CP098602.1 Protein Homology CDS 4656238 4656516 . + 0 ID=cds-UUF00488.1;Parent=gene-NDY24_20195;Dbxref=NCBI_GP:UUF00488.1;Name=UUF00488.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002801494.1;locus_tag=NDY24_20195;product=RNA chaperone Hfq;protein_id=UUF00488.1;transl_table=11 CP098602.1 Genbank gene 4656528 4657847 . + . ID=gene-NDY24_20200;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=NDY24_20200 CP098602.1 Protein Homology CDS 4656528 4657847 . + 0 ID=cds-UUE98011.1;Parent=gene-NDY24_20200;Dbxref=NCBI_GP:UUE98011.1;Name=UUE98011.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503654.1;locus_tag=NDY24_20200;product=GTPase HflX;protein_id=UUE98011.1;transl_table=11 CP098602.1 Genbank gene 4658043 4658537 . + . ID=gene-NDY24_20205;Name=NDY24_20205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20205 CP098602.1 Protein Homology CDS 4658043 4658537 . + 0 ID=cds-UUE98012.1;Parent=gene-NDY24_20205;Dbxref=NCBI_GP:UUE98012.1;Name=UUE98012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481865.1;locus_tag=NDY24_20205;product=CinA family protein;protein_id=UUE98012.1;transl_table=11 CP098602.1 Genbank gene 4658817 4661345 . + . ID=gene-NDY24_20210;Name=NDY24_20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20210 CP098602.1 Protein Homology CDS 4658817 4661345 . + 0 ID=cds-UUE98013.1;Parent=gene-NDY24_20210;Dbxref=NCBI_GP:UUE98013.1;Name=UUE98013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453299.1;locus_tag=NDY24_20210;product=TonB-dependent receptor;protein_id=UUE98013.1;transl_table=11 CP098602.1 Genbank gene 4661777 4663453 . + . ID=gene-NDY24_20215;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=NDY24_20215 CP098602.1 Protein Homology CDS 4661777 4663453 . + 0 ID=cds-UUE98014.1;Parent=gene-NDY24_20215;Dbxref=NCBI_GP:UUE98014.1;Name=UUE98014.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiB;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155111.1;locus_tag=NDY24_20215;product=2-polyprenylphenol 6-hydroxylase;protein_id=UUE98014.1;transl_table=11 CP098602.1 Genbank gene 4663563 4664204 . + . ID=gene-NDY24_20220;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=NDY24_20220 CP098602.1 Protein Homology CDS 4663563 4664204 . + 0 ID=cds-UUF00489.1;Parent=gene-NDY24_20220;Dbxref=NCBI_GP:UUF00489.1;Name=UUF00489.1;Ontology_term=GO:0006282,GO:0006355,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269877.1;locus_tag=NDY24_20220;product=transcriptional repressor LexA;protein_id=UUF00489.1;transl_table=11 CP098602.1 Genbank gene 4664377 4665411 . + . ID=gene-NDY24_20225;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=NDY24_20225 CP098602.1 Protein Homology CDS 4664377 4665411 . + 0 ID=cds-UUE98015.1;Parent=gene-NDY24_20225;Dbxref=NCBI_GP:UUE98015.1;Name=UUE98015.1;Ontology_term=GO:0006281,GO:0006310,GO:0009432,GO:0003677,GO:0008094,GO:0005737;gbkey=CDS;gene=recA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051113.1;locus_tag=NDY24_20225;product=recombinase RecA;protein_id=UUE98015.1;transl_table=11 CP098602.1 Genbank gene 4665695 4666183 . + . ID=gene-NDY24_20230;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=NDY24_20230 CP098602.1 Protein Homology CDS 4665695 4666183 . + 0 ID=cds-UUE98016.1;Parent=gene-NDY24_20230;Dbxref=NCBI_GP:UUE98016.1;Name=UUE98016.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966764.1;locus_tag=NDY24_20230;product=recombination regulator RecX;protein_id=UUE98016.1;transl_table=11 CP098602.1 Genbank gene 4666284 4668932 . + . ID=gene-NDY24_20235;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=NDY24_20235 CP098602.1 Protein Homology CDS 4666284 4668932 . + 0 ID=cds-UUE98017.1;Parent=gene-NDY24_20235;Dbxref=NCBI_GP:UUE98017.1;Name=UUE98017.1;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347112.1;locus_tag=NDY24_20235;product=alanine--tRNA ligase;protein_id=UUE98017.1;transl_table=11 CP098602.1 Genbank gene 4669072 4669284 . + . ID=gene-NDY24_20240;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=NDY24_20240 CP098602.1 Protein Homology CDS 4669072 4669284 . + 0 ID=cds-UUE98018.1;Parent=gene-NDY24_20240;Dbxref=NCBI_GP:UUE98018.1;Name=UUE98018.1;Ontology_term=GO:0006109,GO:0006402,GO:0003723;gbkey=CDS;gene=csrA;go_function=RNA binding|0003723||IEA;go_process=regulation of carbohydrate metabolic process|0006109||IEA,mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481884.1;locus_tag=NDY24_20240;product=carbon storage regulator CsrA;protein_id=UUE98018.1;transl_table=11 CP098602.1 Genbank gene 4669368 4669460 . + . ID=gene-NDY24_20245;Name=NDY24_20245;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_20245 CP098602.1 tRNAscan-SE tRNA 4669368 4669460 . + . ID=rna-NDY24_20245;Parent=gene-NDY24_20245;anticodon=(pos:4669402..4669404);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_20245;product=tRNA-Ser CP098602.1 tRNAscan-SE exon 4669368 4669460 . + . ID=exon-NDY24_20245-1;Parent=rna-NDY24_20245;anticodon=(pos:4669402..4669404);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_20245;product=tRNA-Ser CP098602.1 Genbank gene 4669732 4671678 . + . ID=gene-NDY24_20250;Name=NDY24_20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20250 CP098602.1 Protein Homology CDS 4669732 4671678 . + 0 ID=cds-UUF00490.1;Parent=gene-NDY24_20250;Dbxref=NCBI_GP:UUF00490.1;Name=UUF00490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904269.1;locus_tag=NDY24_20250;product=PAS domain-containing methyl-accepting chemotaxis protein;protein_id=UUF00490.1;transl_table=11 CP098602.1 Genbank gene 4672077 4672778 . - . ID=gene-NDY24_20255;Name=NDY24_20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20255 CP098602.1 Protein Homology CDS 4672077 4672778 . - 0 ID=cds-UUE98019.1;Parent=gene-NDY24_20255;Dbxref=NCBI_GP:UUE98019.1;Name=UUE98019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966758.1;locus_tag=NDY24_20255;product=pirin family protein;protein_id=UUE98019.1;transl_table=11 CP098602.1 Genbank gene 4672915 4673859 . + . ID=gene-NDY24_20260;Name=NDY24_20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20260 CP098602.1 Protein Homology CDS 4672915 4673859 . + 0 ID=cds-UUE98020.1;Parent=gene-NDY24_20260;Dbxref=NCBI_GP:UUE98020.1;Name=UUE98020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438553.1;locus_tag=NDY24_20260;product=LysR family transcriptional regulator;protein_id=UUE98020.1;transl_table=11 CP098602.1 Genbank gene 4674017 4674244 . - . ID=gene-NDY24_20265;Name=NDY24_20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20265 CP098602.1 GeneMarkS-2+ CDS 4674017 4674244 . - 0 ID=cds-UUE98021.1;Parent=gene-NDY24_20265;Dbxref=NCBI_GP:UUE98021.1;Name=UUE98021.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_20265;product=hypothetical protein;protein_id=UUE98021.1;transl_table=11 CP098602.1 Genbank gene 4675034 4675110 . - . ID=gene-NDY24_20270;Name=NDY24_20270;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_20270 CP098602.1 tRNAscan-SE tRNA 4675034 4675110 . - . ID=rna-NDY24_20270;Parent=gene-NDY24_20270;anticodon=(pos:complement(4675074..4675076));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_20270;product=tRNA-Arg CP098602.1 tRNAscan-SE exon 4675034 4675110 . - . ID=exon-NDY24_20270-1;Parent=rna-NDY24_20270;anticodon=(pos:complement(4675074..4675076));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_20270;product=tRNA-Arg CP098602.1 Genbank gene 4675205 4675281 . - . ID=gene-NDY24_20275;Name=NDY24_20275;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_20275 CP098602.1 tRNAscan-SE tRNA 4675205 4675281 . - . ID=rna-NDY24_20275;Parent=gene-NDY24_20275;anticodon=(pos:complement(4675245..4675247));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_20275;product=tRNA-Arg CP098602.1 tRNAscan-SE exon 4675205 4675281 . - . ID=exon-NDY24_20275-1;Parent=rna-NDY24_20275;anticodon=(pos:complement(4675245..4675247));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_20275;product=tRNA-Arg CP098602.1 Genbank gene 4675418 4676227 . - . ID=gene-NDY24_20280;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=NDY24_20280 CP098602.1 Protein Homology CDS 4675418 4676227 . - 0 ID=cds-UUE98022.1;Parent=gene-NDY24_20280;Dbxref=NCBI_GP:UUE98022.1;Name=UUE98022.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481896.1;locus_tag=NDY24_20280;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=UUE98022.1;transl_table=11 CP098602.1 Genbank gene 4676265 4676936 . - . ID=gene-NDY24_20285;Name=NDY24_20285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20285 CP098602.1 Protein Homology CDS 4676265 4676936 . - 0 ID=cds-UUE98023.1;Parent=gene-NDY24_20285;Dbxref=NCBI_GP:UUE98023.1;Name=UUE98023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904787.1;locus_tag=NDY24_20285;product=DUF1275 domain-containing protein;protein_id=UUE98023.1;transl_table=11 CP098602.1 Genbank gene 4676943 4677425 . - . ID=gene-NDY24_20290;Name=NDY24_20290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20290 CP098602.1 Protein Homology CDS 4676943 4677425 . - 0 ID=cds-UUE98024.1;Parent=gene-NDY24_20290;Dbxref=NCBI_GP:UUE98024.1;Name=UUE98024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481901.1;locus_tag=NDY24_20290;product=hypothetical protein;protein_id=UUE98024.1;transl_table=11 CP098602.1 Genbank gene 4677425 4678822 . - . ID=gene-NDY24_20295;Name=NDY24_20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20295 CP098602.1 Protein Homology CDS 4677425 4678822 . - 0 ID=cds-UUE98025.1;Parent=gene-NDY24_20295;Dbxref=NCBI_GP:UUE98025.1;Name=UUE98025.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365742.1;locus_tag=NDY24_20295;product=PhoH family protein;protein_id=UUE98025.1;transl_table=11 CP098602.1 Genbank gene 4678905 4679387 . - . ID=gene-NDY24_20300;Name=NDY24_20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20300 CP098602.1 Protein Homology CDS 4678905 4679387 . - 0 ID=cds-UUE98026.1;Parent=gene-NDY24_20300;Dbxref=NCBI_GP:UUE98026.1;Name=UUE98026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481906.1;locus_tag=NDY24_20300;product=peroxiredoxin;protein_id=UUE98026.1;transl_table=11 CP098602.1 Genbank gene 4679425 4679775 . - . ID=gene-NDY24_20305;Name=NDY24_20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20305 CP098602.1 Protein Homology CDS 4679425 4679775 . - 0 ID=cds-UUE98027.1;Parent=gene-NDY24_20305;Dbxref=NCBI_GP:UUE98027.1;Name=UUE98027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300297.1;locus_tag=NDY24_20305;product=ribonuclease E inhibitor RraB;protein_id=UUE98027.1;transl_table=11 CP098602.1 Genbank gene 4679789 4680415 . - . ID=gene-NDY24_20310;Name=NDY24_20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20310 CP098602.1 Protein Homology CDS 4679789 4680415 . - 0 ID=cds-UUE98028.1;Parent=gene-NDY24_20310;Dbxref=NCBI_GP:UUE98028.1;Name=UUE98028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503111.1;locus_tag=NDY24_20310;product=glycine cleavage system protein R;protein_id=UUE98028.1;transl_table=11 CP098602.1 Genbank gene 4680509 4681417 . + . ID=gene-NDY24_20315;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=NDY24_20315 CP098602.1 Protein Homology CDS 4680509 4681417 . + 0 ID=cds-UUE98029.1;Parent=gene-NDY24_20315;Dbxref=NCBI_GP:UUE98029.1;Name=UUE98029.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002813784.1;locus_tag=NDY24_20315;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=UUE98029.1;transl_table=11 CP098602.1 Genbank gene 4681434 4681949 . + . ID=gene-NDY24_20320;Name=NDY24_20320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20320 CP098602.1 Protein Homology CDS 4681434 4681949 . + 0 ID=cds-UUE98030.1;Parent=gene-NDY24_20320;Dbxref=NCBI_GP:UUE98030.1;Name=UUE98030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994930.1;locus_tag=NDY24_20320;product=hypothetical protein;protein_id=UUE98030.1;transl_table=11 CP098602.1 Genbank gene 4682078 4682401 . - . ID=gene-NDY24_20325;Name=NDY24_20325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20325 CP098602.1 Protein Homology CDS 4682078 4682401 . - 0 ID=cds-UUE98031.1;Parent=gene-NDY24_20325;Dbxref=NCBI_GP:UUE98031.1;Name=UUE98031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994928.1;locus_tag=NDY24_20325;product=ferredoxin family protein;protein_id=UUE98031.1;transl_table=11 CP098602.1 Genbank gene 4682728 4683705 . - . ID=gene-NDY24_20330;Name=NDY24_20330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20330 CP098602.1 Protein Homology CDS 4682728 4683705 . - 0 ID=cds-UUE98032.1;Parent=gene-NDY24_20330;Dbxref=NCBI_GP:UUE98032.1;Name=UUE98032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452537.1;locus_tag=NDY24_20330;product=2-dehydro-3-deoxygalactonokinase;protein_id=UUE98032.1;transl_table=11 CP098602.1 Genbank gene 4683702 4684619 . - . ID=gene-NDY24_20335;Name=NDY24_20335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20335 CP098602.1 Protein Homology CDS 4683702 4684619 . - 0 ID=cds-UUE98033.1;Parent=gene-NDY24_20335;Dbxref=NCBI_GP:UUE98033.1;Name=UUE98033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155129.1;locus_tag=NDY24_20335;product=SMP-30/gluconolactonase/LRE family protein;protein_id=UUE98033.1;transl_table=11 CP098602.1 Genbank gene 4684613 4685761 . - . ID=gene-NDY24_20340;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=NDY24_20340 CP098602.1 Protein Homology CDS 4684613 4685761 . - 0 ID=cds-UUE98034.1;Parent=gene-NDY24_20340;Dbxref=NCBI_GP:UUE98034.1;Name=UUE98034.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=cellular amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1;locus_tag=NDY24_20340;product=galactonate dehydratase;protein_id=UUE98034.1;transl_table=11 CP098602.1 Genbank gene 4685758 4686390 . - . ID=gene-NDY24_20345;Name=NDY24_20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20345 CP098602.1 Protein Homology CDS 4685758 4686390 . - 0 ID=cds-UUE98035.1;Parent=gene-NDY24_20345;Dbxref=NCBI_GP:UUE98035.1;Name=UUE98035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452718.1;locus_tag=NDY24_20345;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=UUE98035.1;transl_table=11 CP098602.1 Genbank gene 4686806 4687777 . + . ID=gene-NDY24_20350;Name=NDY24_20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20350 CP098602.1 Protein Homology CDS 4686806 4687777 . + 0 ID=cds-UUE98036.1;Parent=gene-NDY24_20350;Dbxref=NCBI_GP:UUE98036.1;Name=UUE98036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903232.1;locus_tag=NDY24_20350;product=LysR family transcriptional regulator;protein_id=UUE98036.1;transl_table=11 CP098602.1 Genbank gene 4688041 4690971 . + . ID=gene-NDY24_20355;Name=NDY24_20355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20355 CP098602.1 Protein Homology CDS 4688041 4690971 . + 0 ID=cds-UUE98037.1;Parent=gene-NDY24_20355;Dbxref=NCBI_GP:UUE98037.1;Name=UUE98037.1;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005919521.1;locus_tag=NDY24_20355;product=TonB-dependent receptor;protein_id=UUE98037.1;transl_table=11 CP098602.1 Genbank pseudogene 4691309 4694045 . + . ID=gene-NDY24_20360;Name=NDY24_20360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_20360;pseudo=true CP098602.1 Protein Homology CDS 4691309 4694045 . + 0 ID=cds-NDY24_20360;Parent=gene-NDY24_20360;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171617.1;locus_tag=NDY24_20360;product=TonB-dependent receptor;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4694155 4696419 . + . ID=gene-NDY24_20365;Name=NDY24_20365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20365 CP098602.1 Protein Homology CDS 4694155 4696419 . + 0 ID=cds-UUE98038.1;Parent=gene-NDY24_20365;Dbxref=NCBI_GP:UUE98038.1;Name=UUE98038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849742.1;locus_tag=NDY24_20365;product=cellulase;protein_id=UUE98038.1;transl_table=11 CP098602.1 Genbank pseudogene 4696526 4698441 . + . ID=gene-NDY24_20370;Name=NDY24_20370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_20370;pseudo=true CP098602.1 Protein Homology CDS 4696526 4698441 . + 0 ID=cds-NDY24_20370;Parent=gene-NDY24_20370;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481935.1;locus_tag=NDY24_20370;product=beta galactosidase jelly roll domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4698479 4700194 . + . ID=gene-NDY24_20375;Name=NDY24_20375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20375 CP098602.1 Protein Homology CDS 4698479 4700194 . + 0 ID=cds-UUE98039.1;Parent=gene-NDY24_20375;Dbxref=NCBI_GP:UUE98039.1;Name=UUE98039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438541.1;locus_tag=NDY24_20375;product=DUF5597 domain-containing protein;protein_id=UUE98039.1;transl_table=11 CP098602.1 Genbank gene 4700319 4703222 . + . ID=gene-NDY24_20380;Name=NDY24_20380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20380 CP098602.1 Protein Homology CDS 4700319 4703222 . + 0 ID=cds-UUE98040.1;Parent=gene-NDY24_20380;Dbxref=NCBI_GP:UUE98040.1;Name=UUE98040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114815.1;locus_tag=NDY24_20380;product=DUF5110 domain-containing protein;protein_id=UUE98040.1;transl_table=11 CP098602.1 Genbank gene 4703314 4705695 . + . ID=gene-NDY24_20385;Name=NDY24_20385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20385 CP098602.1 Protein Homology CDS 4703314 4705695 . + 0 ID=cds-UUE98041.1;Parent=gene-NDY24_20385;Dbxref=NCBI_GP:UUE98041.1;Name=UUE98041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924393.1;locus_tag=NDY24_20385;product=glycoside hydrolase family 95 protein;protein_id=UUE98041.1;transl_table=11 CP098602.1 Genbank gene 4705692 4707185 . + . ID=gene-NDY24_20390;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=NDY24_20390 CP098602.1 Protein Homology CDS 4705692 4707185 . + 0 ID=cds-UUE98042.1;Parent=gene-NDY24_20390;Dbxref=NCBI_GP:UUE98042.1;Name=UUE98042.1;Ontology_term=GO:0005997,GO:0042732,GO:0004856,GO:0005515;gbkey=CDS;gene=xylB;go_function=xylulokinase activity|0004856||IEA,protein binding|0005515||IEA;go_process=xylulose metabolic process|0005997||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002813741.1;locus_tag=NDY24_20390;product=xylulokinase;protein_id=UUE98042.1;transl_table=11 CP098602.1 Genbank gene 4707234 4708571 . + . ID=gene-NDY24_20395;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=NDY24_20395 CP098602.1 Protein Homology CDS 4707234 4708571 . + 0 ID=cds-UUE98043.1;Parent=gene-NDY24_20395;Dbxref=NCBI_GP:UUE98043.1;Name=UUE98043.1;Ontology_term=GO:0006098,GO:0042732,GO:0000287,GO:0009045;gbkey=CDS;gene=xylA;go_function=magnesium ion binding|0000287||IEA,xylose isomerase activity|0009045||IEA;go_process=pentose-phosphate shunt|0006098||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171248.1;locus_tag=NDY24_20395;product=xylose isomerase;protein_id=UUE98043.1;transl_table=11 CP098602.1 Genbank gene 4708657 4710084 . + . ID=gene-NDY24_20400;Name=NDY24_20400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20400 CP098602.1 Protein Homology CDS 4708657 4710084 . + 0 ID=cds-UUE98044.1;Parent=gene-NDY24_20400;Dbxref=NCBI_GP:UUE98044.1;Name=UUE98044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371361.1;locus_tag=NDY24_20400;product=sugar porter family MFS transporter;protein_id=UUE98044.1;transl_table=11 CP098602.1 Genbank gene 4710094 4710417 . - . ID=gene-NDY24_20405;Name=NDY24_20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20405 CP098602.1 GeneMarkS-2+ CDS 4710094 4710417 . - 0 ID=cds-UUE98045.1;Parent=gene-NDY24_20405;Dbxref=NCBI_GP:UUE98045.1;Name=UUE98045.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_20405;product=hypothetical protein;protein_id=UUE98045.1;transl_table=11 CP098602.1 Genbank pseudogene 4710469 4712020 . + . ID=gene-NDY24_20410;Name=NDY24_20410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_20410;pseudo=true CP098602.1 Protein Homology CDS 4710469 4712020 . + 0 ID=cds-NDY24_20410;Parent=gene-NDY24_20410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158034.1;locus_tag=NDY24_20410;product=MASE1 domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4711959 4712428 . - . ID=gene-NDY24_20415;Name=NDY24_20415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_20415;pseudo=true CP098602.1 Protein Homology CDS 4711959 4712428 . - 0 ID=cds-NDY24_20415;Parent=gene-NDY24_20415;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993317.1;locus_tag=NDY24_20415;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4712838 4713104 . - . ID=gene-NDY24_20420;Name=NDY24_20420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20420 CP098602.1 Protein Homology CDS 4712838 4713104 . - 0 ID=cds-UUF00491.1;Parent=gene-NDY24_20420;Dbxref=NCBI_GP:UUF00491.1;Name=UUF00491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036936.1;locus_tag=NDY24_20420;product=hypothetical protein;protein_id=UUF00491.1;transl_table=11 CP098602.1 Genbank gene 4713281 4714441 . + . ID=gene-NDY24_20425;Name=NDY24_20425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20425 CP098602.1 Protein Homology CDS 4713281 4714441 . + 0 ID=cds-UUE98046.1;Parent=gene-NDY24_20425;Dbxref=NCBI_GP:UUE98046.1;Name=UUE98046.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036937.1;locus_tag=NDY24_20425;product=N-acetylmuramoyl-L-alanine amidase;protein_id=UUE98046.1;transl_table=11 CP098602.1 Genbank gene 4714477 4715400 . + . ID=gene-NDY24_20430;Name=folE2;gbkey=Gene;gene=folE2;gene_biotype=protein_coding;locus_tag=NDY24_20430 CP098602.1 Protein Homology CDS 4714477 4715400 . + 0 ID=cds-UUE98047.1;Parent=gene-NDY24_20430;Dbxref=NCBI_GP:UUE98047.1;Name=UUE98047.1;Ontology_term=GO:0035998,GO:0003933;gbkey=CDS;gene=folE2;go_function=GTP cyclohydrolase activity|0003933||IEA;go_process=7%2C8-dihydroneopterin 3'-triphosphate biosynthetic process|0035998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158037.1;locus_tag=NDY24_20430;product=GTP cyclohydrolase FolE2;protein_id=UUE98047.1;transl_table=11 CP098602.1 Genbank gene 4715840 4715914 . - . ID=gene-NDY24_20435;Name=NDY24_20435;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_20435 CP098602.1 tRNAscan-SE tRNA 4715840 4715914 . - . ID=rna-NDY24_20435;Parent=gene-NDY24_20435;anticodon=(pos:complement(4715879..4715881));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_20435;product=tRNA-Glu CP098602.1 tRNAscan-SE exon 4715840 4715914 . - . ID=exon-NDY24_20435-1;Parent=rna-NDY24_20435;anticodon=(pos:complement(4715879..4715881));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_20435;product=tRNA-Glu CP098602.1 Genbank gene 4715963 4717330 . + . ID=gene-NDY24_20440;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=NDY24_20440 CP098602.1 Protein Homology CDS 4715963 4717330 . + 0 ID=cds-UUE98048.1;Parent=gene-NDY24_20440;Dbxref=NCBI_GP:UUE98048.1;Name=UUE98048.1;Ontology_term=GO:0006378,GO:0003723,GO:0004652;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,polynucleotide adenylyltransferase activity|0004652||IEA;go_process=mRNA polyadenylation|0006378||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116093.1;locus_tag=NDY24_20440;product=polynucleotide adenylyltransferase PcnB;protein_id=UUE98048.1;transl_table=11 CP098602.1 Genbank gene 4717334 4717819 . + . ID=gene-NDY24_20445;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=NDY24_20445 CP098602.1 Protein Homology CDS 4717334 4717819 . + 0 ID=cds-UUE98049.1;Parent=gene-NDY24_20445;Dbxref=NCBI_GP:UUE98049.1;Name=UUE98049.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169088.1;locus_tag=NDY24_20445;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=UUE98049.1;transl_table=11 CP098602.1 Genbank gene 4717855 4718670 . + . ID=gene-NDY24_20450;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=NDY24_20450 CP098602.1 Protein Homology CDS 4717855 4718670 . + 0 ID=cds-UUE98050.1;Parent=gene-NDY24_20450;Dbxref=NCBI_GP:UUE98050.1;Name=UUE98050.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408567.1;locus_tag=NDY24_20450;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=UUE98050.1;transl_table=11 CP098602.1 Genbank gene 4718667 4719509 . + . ID=gene-NDY24_20455;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=NDY24_20455 CP098602.1 Protein Homology CDS 4718667 4719509 . + 0 ID=cds-UUE98051.1;Parent=gene-NDY24_20455;Dbxref=NCBI_GP:UUE98051.1;Name=UUE98051.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259031.1;locus_tag=NDY24_20455;product=pantoate--beta-alanine ligase;protein_id=UUE98051.1;transl_table=11 CP098602.1 Genbank gene 4719619 4719999 . + . ID=gene-NDY24_20460;Name=NDY24_20460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20460 CP098602.1 Protein Homology CDS 4719619 4719999 . + 0 ID=cds-UUE98052.1;Parent=gene-NDY24_20460;Dbxref=NCBI_GP:UUE98052.1;Name=UUE98052.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036943.1;locus_tag=NDY24_20460;product=aspartate 1-decarboxylase;protein_id=UUE98052.1;transl_table=11 CP098602.1 Genbank gene 4719996 4721510 . + . ID=gene-NDY24_20465;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=NDY24_20465 CP098602.1 Protein Homology CDS 4719996 4721510 . + 0 ID=cds-UUE98053.1;Parent=gene-NDY24_20465;Dbxref=NCBI_GP:UUE98053.1;Name=UUE98053.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300464.1;locus_tag=NDY24_20465;product=glucose-6-phosphate isomerase;protein_id=UUE98053.1;transl_table=11 CP098602.1 Genbank gene 4721723 4722067 . + . ID=gene-NDY24_20470;Name=NDY24_20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20470 CP098602.1 Protein Homology CDS 4721723 4722067 . + 0 ID=cds-UUE98054.1;Parent=gene-NDY24_20470;Dbxref=NCBI_GP:UUE98054.1;Name=UUE98054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371400.1;locus_tag=NDY24_20470;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=UUE98054.1;transl_table=11 CP098602.1 Genbank gene 4722071 4722697 . + . ID=gene-NDY24_20475;Name=NDY24_20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20475 CP098602.1 Protein Homology CDS 4722071 4722697 . + 0 ID=cds-UUE98055.1;Parent=gene-NDY24_20475;Dbxref=NCBI_GP:UUE98055.1;Name=UUE98055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452315.1;locus_tag=NDY24_20475;product=hypothetical protein;protein_id=UUE98055.1;transl_table=11 CP098602.1 Genbank gene 4723620 4725575 . - . ID=gene-NDY24_20480;Name=NDY24_20480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20480 CP098602.1 Protein Homology CDS 4723620 4725575 . - 0 ID=cds-UUE98056.1;Parent=gene-NDY24_20480;Dbxref=NCBI_GP:UUE98056.1;Name=UUE98056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463094.1;locus_tag=NDY24_20480;product=PhoX family protein;protein_id=UUE98056.1;transl_table=11 CP098602.1 Genbank pseudogene 4726011 4728622 . + . ID=gene-NDY24_20485;Name=NDY24_20485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_20485;pseudo=true CP098602.1 Protein Homology CDS 4726011 4728622 . + 0 ID=cds-NDY24_20485;Parent=gene-NDY24_20485;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300459.1;locus_tag=NDY24_20485;product=exo 1%2C3/1%2C4-beta-D-glucan glucohydrolase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4728878 4730440 . + . ID=gene-NDY24_20490;Name=NDY24_20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20490 CP098602.1 Protein Homology CDS 4728878 4730440 . + 0 ID=cds-UUE98057.1;Parent=gene-NDY24_20490;Dbxref=NCBI_GP:UUE98057.1;Name=UUE98057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116097.1;locus_tag=NDY24_20490;product=sodium/sugar symporter;protein_id=UUE98057.1;transl_table=11 CP098602.1 Genbank gene 4730542 4732389 . - . ID=gene-NDY24_20495;Name=NDY24_20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20495 CP098602.1 Protein Homology CDS 4730542 4732389 . - 0 ID=cds-UUE98058.1;Parent=gene-NDY24_20495;Dbxref=NCBI_GP:UUE98058.1;Name=UUE98058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259023.1;locus_tag=NDY24_20495;product=EAL domain-containing protein;protein_id=UUE98058.1;transl_table=11 CP098602.1 Genbank gene 4732825 4733811 . + . ID=gene-NDY24_20500;Name=NDY24_20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20500 CP098602.1 Protein Homology CDS 4732825 4733811 . + 0 ID=cds-UUE98059.1;Parent=gene-NDY24_20500;Dbxref=NCBI_GP:UUE98059.1;Name=UUE98059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503142.1;locus_tag=NDY24_20500;product=glycoside hydrolase family 5 protein;protein_id=UUE98059.1;transl_table=11 CP098602.1 Genbank gene 4734723 4735301 . - . ID=gene-NDY24_20505;Name=NDY24_20505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20505 CP098602.1 Protein Homology CDS 4734723 4735301 . - 0 ID=cds-UUE98060.1;Parent=gene-NDY24_20505;Dbxref=NCBI_GP:UUE98060.1;Name=UUE98060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903100.1;locus_tag=NDY24_20505;product=response regulator transcription factor;protein_id=UUE98060.1;transl_table=11 CP098602.1 Genbank gene 4735376 4736524 . - . ID=gene-NDY24_20510;Name=NDY24_20510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20510 CP098602.1 Protein Homology CDS 4735376 4736524 . - 0 ID=cds-UUE98061.1;Parent=gene-NDY24_20510;Dbxref=NCBI_GP:UUE98061.1;Name=UUE98061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017355953.1;locus_tag=NDY24_20510;product=ATP-binding protein;protein_id=UUE98061.1;transl_table=11 CP098602.1 Genbank gene 4736645 4737910 . + . ID=gene-NDY24_20515;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=NDY24_20515 CP098602.1 Protein Homology CDS 4736645 4737910 . + 0 ID=cds-UUE98062.1;Parent=gene-NDY24_20515;Dbxref=NCBI_GP:UUE98062.1;Name=UUE98062.1;Ontology_term=GO:0044237,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity|0046429||IEA;go_process=cellular metabolic process|0044237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300453.1;locus_tag=NDY24_20515;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=UUE98062.1;transl_table=11 CP098602.1 Genbank gene 4737891 4738604 . + . ID=gene-NDY24_20520;Name=NDY24_20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20520 CP098602.1 Protein Homology CDS 4737891 4738604 . + 0 ID=cds-UUE98063.1;Parent=gene-NDY24_20520;Dbxref=NCBI_GP:UUE98063.1;Name=UUE98063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903103.1;locus_tag=NDY24_20520;product=phosphatase PAP2 family protein;protein_id=UUE98063.1;transl_table=11 CP098602.1 Genbank gene 4738760 4739140 . + . ID=gene-NDY24_20525;Name=NDY24_20525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20525 CP098602.1 Protein Homology CDS 4738760 4739140 . + 0 ID=cds-UUE98064.1;Parent=gene-NDY24_20525;Dbxref=NCBI_GP:UUE98064.1;Name=UUE98064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924451.1;locus_tag=NDY24_20525;product=cupin domain-containing protein;protein_id=UUE98064.1;transl_table=11 CP098602.1 Genbank gene 4739220 4740518 . - . ID=gene-NDY24_20530;Name=NDY24_20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20530 CP098602.1 Protein Homology CDS 4739220 4740518 . - 0 ID=cds-UUE98065.1;Parent=gene-NDY24_20530;Dbxref=NCBI_GP:UUE98065.1;Name=UUE98065.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449320.1;locus_tag=NDY24_20530;product=MFS transporter;protein_id=UUE98065.1;transl_table=11 CP098602.1 Genbank pseudogene 4740684 4740827 . - . ID=gene-NDY24_20535;Name=NDY24_20535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_20535;pseudo=true CP098602.1 Protein Homology CDS 4740684 4740827 . - 0 ID=cds-NDY24_20535;Parent=gene-NDY24_20535;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903105.1;locus_tag=NDY24_20535;product=aspartate/glutamate racemase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4741004 4741915 . - . ID=gene-NDY24_20540;Name=NDY24_20540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20540 CP098602.1 Protein Homology CDS 4741004 4741915 . - 0 ID=cds-UUE98066.1;Parent=gene-NDY24_20540;Dbxref=NCBI_GP:UUE98066.1;Name=UUE98066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002813681.1;locus_tag=NDY24_20540;product=DMT family transporter;protein_id=UUE98066.1;transl_table=11 CP098602.1 Genbank gene 4741909 4742961 . - . ID=gene-NDY24_20545;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=NDY24_20545 CP098602.1 Protein Homology CDS 4741909 4742961 . - 0 ID=cds-UUE98067.1;Parent=gene-NDY24_20545;Dbxref=NCBI_GP:UUE98067.1;Name=UUE98067.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090027.1;locus_tag=NDY24_20545;product=UDP-N-acetylmuramate dehydrogenase;protein_id=UUE98067.1;transl_table=11 CP098602.1 Genbank pseudogene 4742958 4744012 . - . ID=gene-NDY24_20550;Name=NDY24_20550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_20550;pseudo=true CP098602.1 Protein Homology CDS 4742958 4744012 . - 0 ID=cds-NDY24_20550;Parent=gene-NDY24_20550;Note=frameshifted;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090028.1;locus_tag=NDY24_20550;product=quinone-dependent dihydroorotate dehydrogenase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4744018 4744785 . - . ID=gene-NDY24_20555;Name=NDY24_20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20555 CP098602.1 Protein Homology CDS 4744018 4744785 . - 0 ID=cds-UUE98068.1;Parent=gene-NDY24_20555;Dbxref=NCBI_GP:UUE98068.1;Name=UUE98068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472255.1;locus_tag=NDY24_20555;product=class I SAM-dependent methyltransferase;protein_id=UUE98068.1;transl_table=11 CP098602.1 Genbank gene 4744788 4745072 . - . ID=gene-NDY24_20560;Name=NDY24_20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20560 CP098602.1 Protein Homology CDS 4744788 4745072 . - 0 ID=cds-UUE98069.1;Parent=gene-NDY24_20560;Dbxref=NCBI_GP:UUE98069.1;Name=UUE98069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916283.1;locus_tag=NDY24_20560;product=DUF4190 domain-containing protein;protein_id=UUE98069.1;transl_table=11 CP098602.1 Genbank gene 4745452 4746987 . - . ID=gene-NDY24_20565;Name=NDY24_20565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20565 CP098602.1 Protein Homology CDS 4745452 4746987 . - 0 ID=cds-UUE98070.1;Parent=gene-NDY24_20565;Dbxref=NCBI_GP:UUE98070.1;Name=UUE98070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449326.1;locus_tag=NDY24_20565;product=aldehyde dehydrogenase family protein;protein_id=UUE98070.1;transl_table=11 CP098602.1 Genbank gene 4747122 4747198 . + . ID=gene-NDY24_20570;Name=NDY24_20570;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_20570 CP098602.1 tRNAscan-SE tRNA 4747122 4747198 . + . ID=rna-NDY24_20570;Parent=gene-NDY24_20570;anticodon=(pos:4747156..4747158);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_20570;product=tRNA-Arg CP098602.1 tRNAscan-SE exon 4747122 4747198 . + . ID=exon-NDY24_20570-1;Parent=rna-NDY24_20570;anticodon=(pos:4747156..4747158);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_20570;product=tRNA-Arg CP098602.1 Genbank gene 4747787 4752253 . + . ID=gene-NDY24_20575;Name=NDY24_20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20575 CP098602.1 Protein Homology CDS 4747787 4752253 . + 0 ID=cds-UUE98071.1;Parent=gene-NDY24_20575;Dbxref=NCBI_GP:UUE98071.1;Name=UUE98071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452940.1;locus_tag=NDY24_20575;product=polymorphic toxin type 34 domain-containing protein;protein_id=UUE98071.1;transl_table=11 CP098602.1 Genbank gene 4752217 4753101 . + . ID=gene-NDY24_20580;Name=NDY24_20580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20580 CP098602.1 Protein Homology CDS 4752217 4753101 . + 0 ID=cds-UUE98072.1;Parent=gene-NDY24_20580;Dbxref=NCBI_GP:UUE98072.1;Name=UUE98072.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025030.2;locus_tag=NDY24_20580;product=HEAT repeat domain-containing protein;protein_id=UUE98072.1;transl_table=11 CP098602.1 Genbank pseudogene 4753243 4754432 . + . ID=gene-NDY24_20585;Name=NDY24_20585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_20585;pseudo=true CP098602.1 Protein Homology CDS 4753243 4754432 . + 0 ID=cds-NDY24_20585;Parent=gene-NDY24_20585;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=NDY24_20585;product=IS3 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4754451 4755559 . + . ID=gene-NDY24_20590;Name=NDY24_20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20590 CP098602.1 Protein Homology CDS 4754451 4754712 . + 0 ID=cds-UUE98073.1;Parent=gene-NDY24_20590;Dbxref=NCBI_GP:UUE98073.1;Name=UUE98073.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611839.1;locus_tag=NDY24_20590;product=IS3 family transposase;protein_id=UUE98073.1;transl_table=11 CP098602.1 Protein Homology CDS 4754712 4755559 . + 2 ID=cds-UUE98073.1;Parent=gene-NDY24_20590;Dbxref=NCBI_GP:UUE98073.1;Name=UUE98073.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611839.1;locus_tag=NDY24_20590;product=IS3 family transposase;protein_id=UUE98073.1;transl_table=11 CP098602.1 Genbank gene 4755516 4756217 . + . ID=gene-NDY24_20595;Name=NDY24_20595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20595 CP098602.1 GeneMarkS-2+ CDS 4755516 4756217 . + 0 ID=cds-UUE98074.1;Parent=gene-NDY24_20595;Dbxref=NCBI_GP:UUE98074.1;Name=UUE98074.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_20595;product=hypothetical protein;protein_id=UUE98074.1;transl_table=11 CP098602.1 Genbank pseudogene 4756308 4757290 . - . ID=gene-NDY24_20600;Name=NDY24_20600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_20600;pseudo=true CP098602.1 Protein Homology CDS 4756308 4757290 . - 0 ID=cds-NDY24_20600;Parent=gene-NDY24_20600;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=NDY24_20600;product=IS5 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4758534 4758871 . + . ID=gene-NDY24_20605;Name=NDY24_20605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_20605;pseudo=true CP098602.1 Protein Homology CDS 4758534 4758871 . + 0 ID=cds-NDY24_20605;Parent=gene-NDY24_20605;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612183.1;locus_tag=NDY24_20605;product=transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4758969 4759469 . + . ID=gene-NDY24_20610;Name=NDY24_20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20610 CP098602.1 Protein Homology CDS 4758969 4759469 . + 0 ID=cds-UUE98075.1;Parent=gene-NDY24_20610;Dbxref=NCBI_GP:UUE98075.1;Name=UUE98075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158458.1;locus_tag=NDY24_20610;product=tryptophan-rich sensory protein;protein_id=UUE98075.1;transl_table=11 CP098602.1 Genbank gene 4759991 4762498 . + . ID=gene-NDY24_20615;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=NDY24_20615 CP098602.1 Protein Homology CDS 4759991 4762498 . + 0 ID=cds-UUE98076.1;Parent=gene-NDY24_20615;Dbxref=NCBI_GP:UUE98076.1;Name=UUE98076.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=cellular amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113111.1;locus_tag=NDY24_20615;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=UUE98076.1;transl_table=11 CP098602.1 Genbank gene 4762567 4763508 . + . ID=gene-NDY24_20620;Name=NDY24_20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20620 CP098602.1 Protein Homology CDS 4762567 4763508 . + 0 ID=cds-UUE98077.1;Parent=gene-NDY24_20620;Dbxref=NCBI_GP:UUE98077.1;Name=UUE98077.1;Ontology_term=GO:0006566,GO:0004413,GO:0005524;gbkey=CDS;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine metabolic process|0006566||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450790.1;locus_tag=NDY24_20620;product=homoserine kinase;protein_id=UUE98077.1;transl_table=11 CP098602.1 Genbank gene 4763583 4763897 . - . ID=gene-NDY24_20625;Name=NDY24_20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20625 CP098602.1 Protein Homology CDS 4763583 4763897 . - 0 ID=cds-UUE98078.1;Parent=gene-NDY24_20625;Dbxref=NCBI_GP:UUE98078.1;Name=UUE98078.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507566.1;locus_tag=NDY24_20625;product=EthD family reductase;protein_id=UUE98078.1;transl_table=11 CP098602.1 Genbank gene 4764071 4765378 . + . ID=gene-NDY24_20630;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=NDY24_20630 CP098602.1 Protein Homology CDS 4764071 4765378 . + 0 ID=cds-UUE98079.1;Parent=gene-NDY24_20630;Dbxref=NCBI_GP:UUE98079.1;Name=UUE98079.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450787.1;locus_tag=NDY24_20630;product=threonine synthase;protein_id=UUE98079.1;transl_table=11 CP098602.1 Genbank gene 4765480 4766226 . + . ID=gene-NDY24_20635;Name=NDY24_20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20635 CP098602.1 Protein Homology CDS 4765480 4766226 . + 0 ID=cds-UUE98080.1;Parent=gene-NDY24_20635;Dbxref=NCBI_GP:UUE98080.1;Name=UUE98080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155322.1;locus_tag=NDY24_20635;product=murein L%2CD-transpeptidase catalytic domain family protein;protein_id=UUE98080.1;transl_table=11 CP098602.1 Genbank pseudogene 4766452 4767217 . - . ID=gene-NDY24_20640;Name=NDY24_20640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_20640;pseudo=true CP098602.1 Protein Homology CDS 4766452 4767217 . - 0 ID=cds-NDY24_20640;Parent=gene-NDY24_20640;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=NDY24_20640;product=IS5 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4767298 4767963 . - . ID=gene-NDY24_20645;Name=NDY24_20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20645 CP098602.1 Protein Homology CDS 4767298 4767963 . - 0 ID=cds-UUE98081.1;Parent=gene-NDY24_20645;Dbxref=NCBI_GP:UUE98081.1;Name=UUE98081.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159460.1;locus_tag=NDY24_20645;product=helix-turn-helix domain-containing protein;protein_id=UUE98081.1;transl_table=11 CP098602.1 Genbank gene 4768167 4769603 . + . ID=gene-NDY24_20650;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=NDY24_20650 CP098602.1 Protein Homology CDS 4768167 4769603 . + 0 ID=cds-UUE98082.1;Parent=gene-NDY24_20650;Dbxref=NCBI_GP:UUE98082.1;Name=UUE98082.1;Ontology_term=GO:0006427,GO:0004821,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507570.1;locus_tag=NDY24_20650;product=histidine--tRNA ligase;protein_id=UUE98082.1;transl_table=11 CP098602.1 Genbank gene 4769822 4770148 . + . ID=gene-NDY24_20655;Name=NDY24_20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20655 CP098602.1 Protein Homology CDS 4769822 4770148 . + 0 ID=cds-UUE98083.1;Parent=gene-NDY24_20655;Dbxref=NCBI_GP:UUE98083.1;Name=UUE98083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155319.1;locus_tag=NDY24_20655;product=YerC/YecD family TrpR-related protein;protein_id=UUE98083.1;transl_table=11 CP098602.1 Genbank gene 4770158 4771072 . + . ID=gene-NDY24_20660;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=NDY24_20660 CP098602.1 Protein Homology CDS 4770158 4771072 . + 0 ID=cds-UUE98084.1;Parent=gene-NDY24_20660;Dbxref=NCBI_GP:UUE98084.1;Name=UUE98084.1;Ontology_term=GO:0000105,GO:0003879;gbkey=CDS;gene=hisG;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237692.1;locus_tag=NDY24_20660;product=ATP phosphoribosyltransferase;protein_id=UUE98084.1;transl_table=11 CP098602.1 Genbank gene 4771069 4772364 . + . ID=gene-NDY24_20665;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=NDY24_20665 CP098602.1 Protein Homology CDS 4771069 4772364 . + 0 ID=cds-UUE98085.1;Parent=gene-NDY24_20665;Dbxref=NCBI_GP:UUE98085.1;Name=UUE98085.1;Ontology_term=GO:0000105,GO:0004399;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347185.1;locus_tag=NDY24_20665;product=histidinol dehydrogenase;protein_id=UUE98085.1;transl_table=11 CP098602.1 Genbank gene 4772361 4773452 . + . ID=gene-NDY24_20670;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=NDY24_20670 CP098602.1 Protein Homology CDS 4772361 4773452 . + 0 ID=cds-UUE98086.1;Parent=gene-NDY24_20670;Dbxref=NCBI_GP:UUE98086.1;Name=UUE98086.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090046.1;locus_tag=NDY24_20670;product=histidinol-phosphate transaminase;protein_id=UUE98086.1;transl_table=11 CP098602.1 Genbank gene 4773449 4774576 . + . ID=gene-NDY24_20675;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=NDY24_20675 CP098602.1 Protein Homology CDS 4773449 4774576 . + 0 ID=cds-UUE98087.1;Parent=gene-NDY24_20675;Dbxref=NCBI_GP:UUE98087.1;Name=UUE98087.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571443.1;locus_tag=NDY24_20675;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=UUE98087.1;transl_table=11 CP098602.1 Genbank gene 4774573 4775175 . + . ID=gene-NDY24_20680;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=NDY24_20680 CP098602.1 Protein Homology CDS 4774573 4775175 . + 0 ID=cds-UUE98088.1;Parent=gene-NDY24_20680;Dbxref=NCBI_GP:UUE98088.1;Name=UUE98088.1;Ontology_term=GO:0000105,GO:0000107,GO:0016884;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302508.1;locus_tag=NDY24_20680;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=UUE98088.1;transl_table=11 CP098602.1 Genbank gene 4775172 4775906 . + . ID=gene-NDY24_20685;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=NDY24_20685 CP098602.1 Protein Homology CDS 4775172 4775906 . + 0 ID=cds-UUE98089.1;Parent=gene-NDY24_20685;Dbxref=NCBI_GP:UUE98089.1;Name=UUE98089.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155313.1;locus_tag=NDY24_20685;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=UUE98089.1;transl_table=11 CP098602.1 Genbank gene 4775900 4776676 . + . ID=gene-NDY24_20690;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=NDY24_20690 CP098602.1 Protein Homology CDS 4775900 4776676 . + 0 ID=cds-UUE98090.1;Parent=gene-NDY24_20690;Dbxref=NCBI_GP:UUE98090.1;Name=UUE98090.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503177.1;locus_tag=NDY24_20690;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=UUE98090.1;transl_table=11 CP098602.1 Genbank gene 4776712 4777290 . + . ID=gene-NDY24_20695;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=NDY24_20695 CP098602.1 Protein Homology CDS 4776712 4777290 . + 0 ID=cds-UUF00492.1;Parent=gene-NDY24_20695;Dbxref=NCBI_GP:UUF00492.1;Name=UUF00492.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851328.1;locus_tag=NDY24_20695;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=UUF00492.1;transl_table=11 CP098602.1 Genbank gene 4777457 4779043 . + . ID=gene-NDY24_20700;Name=NDY24_20700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20700 CP098602.1 Protein Homology CDS 4777457 4779043 . + 0 ID=cds-UUE98091.1;Parent=gene-NDY24_20700;Dbxref=NCBI_GP:UUE98091.1;Name=UUE98091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017168443.1;locus_tag=NDY24_20700;product=calcineurin-like phosphoesterase family protein;protein_id=UUE98091.1;transl_table=11 CP098602.1 Genbank gene 4779332 4780423 . - . ID=gene-NDY24_20705;Name=NDY24_20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20705 CP098602.1 Protein Homology CDS 4779332 4780423 . - 0 ID=cds-UUE98092.1;Parent=gene-NDY24_20705;Dbxref=NCBI_GP:UUE98092.1;Name=UUE98092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450773.1;locus_tag=NDY24_20705;product=C13 family peptidase;protein_id=UUE98092.1;transl_table=11 CP098602.1 Genbank gene 4780904 4781602 . - . ID=gene-NDY24_20710;Name=mtnC;gbkey=Gene;gene=mtnC;gene_biotype=protein_coding;locus_tag=NDY24_20710 CP098602.1 Protein Homology CDS 4780904 4781602 . - 0 ID=cds-UUE98093.1;Parent=gene-NDY24_20710;Dbxref=NCBI_GP:UUE98093.1;Name=UUE98093.1;Ontology_term=GO:0019509,GO:0016791,GO:0016862;gbkey=CDS;gene=mtnC;go_function=phosphatase activity|0016791||IEA,intramolecular oxidoreductase activity%2C interconverting keto- and enol-groups|0016862||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174222.1;locus_tag=NDY24_20710;product=acireductone synthase;protein_id=UUE98093.1;transl_table=11 CP098602.1 Genbank gene 4781605 4782171 . - . ID=gene-NDY24_20715;Name=NDY24_20715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20715 CP098602.1 Protein Homology CDS 4781605 4782171 . - 0 ID=cds-UUE98094.1;Parent=gene-NDY24_20715;Dbxref=NCBI_GP:UUE98094.1;Name=UUE98094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571451.1;locus_tag=NDY24_20715;product=acireductone dioxygenase;protein_id=UUE98094.1;transl_table=11 CP098602.1 Genbank gene 4782212 4782865 . - . ID=gene-NDY24_20720;Name=NDY24_20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20720 CP098602.1 Protein Homology CDS 4782212 4782865 . - 0 ID=cds-UUE98095.1;Parent=gene-NDY24_20720;Dbxref=NCBI_GP:UUE98095.1;Name=UUE98095.1;Ontology_term=GO:0019509,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155307.1;locus_tag=NDY24_20720;product=methylthioribulose 1-phosphate dehydratase;protein_id=UUE98095.1;transl_table=11 CP098602.1 Genbank gene 4783433 4784863 . - . ID=gene-NDY24_20725;Name=NDY24_20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20725 CP098602.1 Protein Homology CDS 4783433 4784863 . - 0 ID=cds-UUE98096.1;Parent=gene-NDY24_20725;Dbxref=NCBI_GP:UUE98096.1;Name=UUE98096.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486240.1;locus_tag=NDY24_20725;product=amino acid permease;protein_id=UUE98096.1;transl_table=11 CP098602.1 Genbank gene 4785005 4786477 . - . ID=gene-NDY24_20730;Name=NDY24_20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20730 CP098602.1 Protein Homology CDS 4785005 4786477 . - 0 ID=cds-UUE98097.1;Parent=gene-NDY24_20730;Dbxref=NCBI_GP:UUE98097.1;Name=UUE98097.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922595.1;locus_tag=NDY24_20730;product=amino acid permease;protein_id=UUE98097.1;transl_table=11 CP098602.1 Genbank gene 4786620 4787207 . + . ID=gene-NDY24_20735;Name=NDY24_20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20735 CP098602.1 Protein Homology CDS 4786620 4787207 . + 0 ID=cds-UUE98098.1;Parent=gene-NDY24_20735;Dbxref=NCBI_GP:UUE98098.1;Name=UUE98098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159458.1;locus_tag=NDY24_20735;product=NUDIX hydrolase;protein_id=UUE98098.1;transl_table=11 CP098602.1 Genbank gene 4787627 4788868 . - . ID=gene-NDY24_20740;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=NDY24_20740 CP098602.1 Protein Homology CDS 4787627 4788868 . - 0 ID=cds-UUE98099.1;Parent=gene-NDY24_20740;Dbxref=NCBI_GP:UUE98099.1;Name=UUE98099.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915394.1;locus_tag=NDY24_20740;product=phosphoglycerate dehydrogenase;protein_id=UUE98099.1;transl_table=11 CP098602.1 Genbank gene 4789078 4790496 . + . ID=gene-NDY24_20745;Name=NDY24_20745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20745 CP098602.1 Protein Homology CDS 4789078 4790496 . + 0 ID=cds-UUE98100.1;Parent=gene-NDY24_20745;Dbxref=NCBI_GP:UUE98100.1;Name=UUE98100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155302.1;locus_tag=NDY24_20745;product=FAD-binding oxidoreductase;protein_id=UUE98100.1;transl_table=11 CP098602.1 Genbank gene 4790531 4790824 . + . ID=gene-NDY24_20750;Name=NDY24_20750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20750 CP098602.1 Protein Homology CDS 4790531 4790824 . + 0 ID=cds-UUE98101.1;Parent=gene-NDY24_20750;Dbxref=NCBI_GP:UUE98101.1;Name=UUE98101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408424.1;locus_tag=NDY24_20750;product=DUF2388 domain-containing protein;protein_id=UUE98101.1;transl_table=11 CP098602.1 Genbank gene 4790821 4792680 . + . ID=gene-NDY24_20755;Name=NDY24_20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20755 CP098602.1 Protein Homology CDS 4790821 4792680 . + 0 ID=cds-UUE98102.1;Parent=gene-NDY24_20755;Dbxref=NCBI_GP:UUE98102.1;Name=UUE98102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367134.1;locus_tag=NDY24_20755;product=DUF4105 domain-containing protein;protein_id=UUE98102.1;transl_table=11 CP098602.1 Genbank gene 4792858 4793250 . - . ID=gene-NDY24_20760;Name=NDY24_20760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20760 CP098602.1 Protein Homology CDS 4792858 4793250 . - 0 ID=cds-UUE98103.1;Parent=gene-NDY24_20760;Dbxref=NCBI_GP:UUE98103.1;Name=UUE98103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155301.1;locus_tag=NDY24_20760;product=hypothetical protein;protein_id=UUE98103.1;transl_table=11 CP098602.1 Genbank gene 4793250 4793816 . - . ID=gene-NDY24_20765;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=NDY24_20765 CP098602.1 Protein Homology CDS 4793250 4793816 . - 0 ID=cds-UUE98104.1;Parent=gene-NDY24_20765;Dbxref=NCBI_GP:UUE98104.1;Name=UUE98104.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009603592.1;locus_tag=NDY24_20765;product=elongation factor P-like protein YeiP;protein_id=UUE98104.1;transl_table=11 CP098602.1 Genbank gene 4793917 4794687 . - . ID=gene-NDY24_20770;Name=NDY24_20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20770 CP098602.1 Protein Homology CDS 4793917 4794687 . - 0 ID=cds-UUE98105.1;Parent=gene-NDY24_20770;Dbxref=NCBI_GP:UUE98105.1;Name=UUE98105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486257.1;locus_tag=NDY24_20770;product=SDR family oxidoreductase;protein_id=UUE98105.1;transl_table=11 CP098602.1 Genbank gene 4794838 4795734 . - . ID=gene-NDY24_20775;Name=NDY24_20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20775 CP098602.1 Protein Homology CDS 4794838 4795734 . - 0 ID=cds-UUE98106.1;Parent=gene-NDY24_20775;Dbxref=NCBI_GP:UUE98106.1;Name=UUE98106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571466.1;locus_tag=NDY24_20775;product=hydroxymethylglutaryl-CoA lyase;protein_id=UUE98106.1;transl_table=11 CP098602.1 Genbank pseudogene 4795731 4796529 . - . ID=gene-NDY24_20780;Name=NDY24_20780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_20780;pseudo=true CP098602.1 Protein Homology CDS 4795731 4796529 . - 0 ID=cds-NDY24_20780;Parent=gene-NDY24_20780;Note=frameshifted;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155296.1;locus_tag=NDY24_20780;product=enoyl-CoA hydratase-related protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4796645 4796893 . + . ID=gene-NDY24_20785;Name=NDY24_20785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20785 CP098602.1 Protein Homology CDS 4796645 4796893 . + 0 ID=cds-UUF00493.1;Parent=gene-NDY24_20785;Dbxref=NCBI_GP:UUF00493.1;Name=UUF00493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016944573.1;locus_tag=NDY24_20785;product=ferrous iron transport protein A;protein_id=UUF00493.1;transl_table=11 CP098602.1 Genbank gene 4796890 4798749 . + . ID=gene-NDY24_20790;Name=NDY24_20790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20790 CP098602.1 Protein Homology CDS 4796890 4798749 . + 0 ID=cds-UUE98107.1;Parent=gene-NDY24_20790;Dbxref=NCBI_GP:UUE98107.1;Name=UUE98107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017164088.1;locus_tag=NDY24_20790;product=ferrous iron transporter B;protein_id=UUE98107.1;transl_table=11 CP098602.1 Genbank gene 4798751 4799005 . + . ID=gene-NDY24_20795;Name=NDY24_20795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20795 CP098602.1 Protein Homology CDS 4798751 4799005 . + 0 ID=cds-UUE98108.1;Parent=gene-NDY24_20795;Dbxref=NCBI_GP:UUE98108.1;Name=UUE98108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051184.1;locus_tag=NDY24_20795;product=hypothetical protein;protein_id=UUE98108.1;transl_table=11 CP098602.1 Genbank pseudogene 4799057 4800248 . + . ID=gene-NDY24_20800;Name=NDY24_20800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_20800;pseudo=true CP098602.1 Protein Homology CDS 4799057 4800248 . + 0 ID=cds-NDY24_20800;Parent=gene-NDY24_20800;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113126.1;locus_tag=NDY24_20800;product=PLP-dependent aminotransferase family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4800401 4801117 . + . ID=gene-NDY24_20805;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=NDY24_20805 CP098602.1 Protein Homology CDS 4800401 4801117 . + 0 ID=cds-UUE98109.1;Parent=gene-NDY24_20805;Dbxref=NCBI_GP:UUE98109.1;Name=UUE98109.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367114.1;locus_tag=NDY24_20805;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=UUE98109.1;transl_table=11 CP098602.1 Genbank gene 4801357 4802484 . + . ID=gene-NDY24_20810;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=NDY24_20810 CP098602.1 Protein Homology CDS 4801357 4802484 . + 0 ID=cds-UUE98110.1;Parent=gene-NDY24_20810;Dbxref=NCBI_GP:UUE98110.1;Name=UUE98110.1;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carA;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037011.1;locus_tag=NDY24_20810;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=UUE98110.1;transl_table=11 CP098602.1 Genbank gene 4802484 4803035 . + . ID=gene-NDY24_20815;Name=NDY24_20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20815 CP098602.1 Protein Homology CDS 4802484 4803035 . + 0 ID=cds-UUE98111.1;Parent=gene-NDY24_20815;Dbxref=NCBI_GP:UUE98111.1;Name=UUE98111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507601.1;locus_tag=NDY24_20815;product=hypothetical protein;protein_id=UUE98111.1;transl_table=11 CP098602.1 Genbank pseudogene 4803093 4806342 . + . ID=gene-NDY24_20820;Name=carB;gbkey=Gene;gene=carB;gene_biotype=pseudogene;locus_tag=NDY24_20820;pseudo=true CP098602.1 Protein Homology CDS 4803093 4806342 . + 0 ID=cds-NDY24_20820;Parent=gene-NDY24_20820;Note=frameshifted;Ontology_term=GO:0006807,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806440.1;locus_tag=NDY24_20820;product=carbamoyl-phosphate synthase large subunit;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4806351 4806820 . + . ID=gene-NDY24_20825;Name=greA;gbkey=Gene;gene=greA;gene_biotype=pseudogene;locus_tag=NDY24_20825;pseudo=true CP098602.1 Protein Homology CDS 4806351 4806820 . + 0 ID=cds-NDY24_20825;Parent=gene-NDY24_20825;Note=frameshifted;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription%2C elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507602.1;locus_tag=NDY24_20825;product=transcription elongation factor GreA;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4806881 4807798 . + . ID=gene-NDY24_20830;Name=NDY24_20830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_20830;pseudo=true CP098602.1 Protein Homology CDS 4806881 4807798 . + 0 ID=cds-NDY24_20830;Parent=gene-NDY24_20830;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806444.1;locus_tag=NDY24_20830;product=phosphoglycerate mutase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4807795 4809544 . + . ID=gene-NDY24_20835;Name=NDY24_20835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_20835;pseudo=true CP098602.1 Protein Homology CDS 4807795 4809544 . + 0 ID=cds-NDY24_20835;Parent=gene-NDY24_20835;Note=frameshifted;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571481.1;locus_tag=NDY24_20835;product=DHHA1 domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4810392 4811429 . - . ID=gene-NDY24_20840;Name=NDY24_20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20840 CP098602.1 Protein Homology CDS 4810392 4811429 . - 0 ID=cds-UUE98112.1;Parent=gene-NDY24_20840;Dbxref=NCBI_GP:UUE98112.1;Name=UUE98112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903169.1;locus_tag=NDY24_20840;product=DUF1176 domain-containing protein;protein_id=UUE98112.1;transl_table=11 CP098602.1 Genbank gene 4811531 4812745 . - . ID=gene-NDY24_20845;Name=NDY24_20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20845 CP098602.1 Protein Homology CDS 4811531 4812745 . - 0 ID=cds-UUF00494.1;Parent=gene-NDY24_20845;Dbxref=NCBI_GP:UUF00494.1;Name=UUF00494.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903170.1;locus_tag=NDY24_20845;product=acyltransferase family protein;protein_id=UUF00494.1;transl_table=11 CP098602.1 Genbank gene 4812897 4813820 . + . ID=gene-NDY24_20850;Name=NDY24_20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20850 CP098602.1 Protein Homology CDS 4812897 4813820 . + 0 ID=cds-UUE98113.1;Parent=gene-NDY24_20850;Dbxref=NCBI_GP:UUE98113.1;Name=UUE98113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903171.1;locus_tag=NDY24_20850;product=LytTR family transcriptional regulator;protein_id=UUE98113.1;transl_table=11 CP098602.1 Genbank gene 4814043 4815168 . + . ID=gene-NDY24_20855;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=NDY24_20855 CP098602.1 Protein Homology CDS 4814043 4814117 . + 0 ID=cds-UUE98114.1;Parent=gene-NDY24_20855;Dbxref=NCBI_GP:UUE98114.1;Name=UUE98114.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503214.1;locus_tag=NDY24_20855;product=peptide chain release factor 2;protein_id=UUE98114.1;transl_table=11 CP098602.1 Protein Homology CDS 4814119 4815168 . + 0 ID=cds-UUE98114.1;Parent=gene-NDY24_20855;Dbxref=NCBI_GP:UUE98114.1;Name=UUE98114.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503214.1;locus_tag=NDY24_20855;product=peptide chain release factor 2;protein_id=UUE98114.1;transl_table=11 CP098602.1 Genbank gene 4815387 4818179 . + . ID=gene-NDY24_20860;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=NDY24_20860 CP098602.1 Protein Homology CDS 4815387 4818179 . + 0 ID=cds-UUE98115.1;Parent=gene-NDY24_20860;Dbxref=NCBI_GP:UUE98115.1;Name=UUE98115.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486300.1;locus_tag=NDY24_20860;product=lysine--tRNA ligase;protein_id=UUE98115.1;transl_table=11 CP098602.1 Genbank gene 4818190 4818807 . + . ID=gene-NDY24_20865;Name=NDY24_20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20865 CP098602.1 Protein Homology CDS 4818190 4818807 . + 0 ID=cds-UUF00495.1;Parent=gene-NDY24_20865;Dbxref=NCBI_GP:UUF00495.1;Name=UUF00495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159452.1;locus_tag=NDY24_20865;product=RpfH protein;protein_id=UUF00495.1;transl_table=11 CP098602.1 Genbank gene 4818815 4820989 . + . ID=gene-NDY24_20870;Name=NDY24_20870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20870 CP098602.1 Protein Homology CDS 4818815 4820989 . + 0 ID=cds-UUE98116.1;Parent=gene-NDY24_20870;Dbxref=NCBI_GP:UUE98116.1;Name=UUE98116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174224.1;locus_tag=NDY24_20870;product=ATP-binding protein;protein_id=UUE98116.1;transl_table=11 CP098602.1 Genbank gene 4821003 4821872 . - . ID=gene-NDY24_20875;Name=NDY24_20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20875 CP098602.1 Protein Homology CDS 4821003 4821872 . - 0 ID=cds-UUE98117.1;Parent=gene-NDY24_20875;Dbxref=NCBI_GP:UUE98117.1;Name=UUE98117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486308.1;locus_tag=NDY24_20875;product=crotonase/enoyl-CoA hydratase family protein;protein_id=UUE98117.1;transl_table=11 CP098602.1 Genbank gene 4822051 4823733 . - . ID=gene-NDY24_20880;Name=NDY24_20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20880 CP098602.1 Protein Homology CDS 4822051 4823733 . - 0 ID=cds-UUE98118.1;Parent=gene-NDY24_20880;Dbxref=NCBI_GP:UUE98118.1;Name=UUE98118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930006.1;locus_tag=NDY24_20880;product=long-chain fatty acid--CoA ligase;protein_id=UUE98118.1;transl_table=11 CP098602.1 Genbank gene 4823831 4824280 . + . ID=gene-NDY24_20885;Name=NDY24_20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20885 CP098602.1 Protein Homology CDS 4823831 4824280 . + 0 ID=cds-UUE98119.1;Parent=gene-NDY24_20885;Dbxref=NCBI_GP:UUE98119.1;Name=UUE98119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903178.1;locus_tag=NDY24_20885;product=nuclear transport factor 2 family protein;protein_id=UUE98119.1;transl_table=11 CP098602.1 Genbank pseudogene 4824356 4827126 . - . ID=gene-NDY24_20890;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=pseudogene;locus_tag=NDY24_20890;pseudo=true CP098602.1 Protein Homology CDS 4824356 4827126 . - 0 ID=cds-NDY24_20890;Parent=gene-NDY24_20890;Note=frameshifted;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159833.1;locus_tag=NDY24_20890;product=aconitate hydratase AcnA;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4827278 4827526 . + . ID=gene-NDY24_20895;Name=NDY24_20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20895 CP098602.1 Protein Homology CDS 4827278 4827526 . + 0 ID=cds-UUE98120.1;Parent=gene-NDY24_20895;Dbxref=NCBI_GP:UUE98120.1;Name=UUE98120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115874.1;locus_tag=NDY24_20895;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=UUE98120.1;transl_table=11 CP098602.1 Genbank gene 4827523 4827933 . + . ID=gene-NDY24_20900;Name=NDY24_20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20900 CP098602.1 Protein Homology CDS 4827523 4827933 . + 0 ID=cds-UUE98121.1;Parent=gene-NDY24_20900;Dbxref=NCBI_GP:UUE98121.1;Name=UUE98121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259444.1;locus_tag=NDY24_20900;product=type II toxin-antitoxin system VapC family toxin;protein_id=UUE98121.1;transl_table=11 CP098602.1 Genbank gene 4828009 4830600 . + . ID=gene-NDY24_20905;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=NDY24_20905 CP098602.1 Protein Homology CDS 4828009 4830600 . + 0 ID=cds-UUE98122.1;Parent=gene-NDY24_20905;Dbxref=NCBI_GP:UUE98122.1;Name=UUE98122.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnB;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017908727.1;locus_tag=NDY24_20905;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=UUE98122.1;transl_table=11 CP098602.1 Genbank gene 4830797 4831645 . + . ID=gene-NDY24_20910;Name=NDY24_20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20910 CP098602.1 Protein Homology CDS 4830797 4831645 . + 0 ID=cds-UUE98123.1;Parent=gene-NDY24_20910;Dbxref=NCBI_GP:UUE98123.1;Name=UUE98123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451231.1;locus_tag=NDY24_20910;product=alpha/beta fold hydrolase;protein_id=UUE98123.1;transl_table=11 CP098602.1 Genbank gene 4832192 4832268 . - . ID=gene-NDY24_20915;Name=NDY24_20915;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_20915 CP098602.1 cmsearch ncRNA 4832192 4832268 . - . ID=rna-NDY24_20915;Parent=gene-NDY24_20915;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_20915;product=sX9 sRNA CP098602.1 cmsearch exon 4832192 4832268 . - . ID=exon-NDY24_20915-1;Parent=rna-NDY24_20915;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_20915;product=sX9 sRNA CP098602.1 Genbank gene 4832327 4834669 . - . ID=gene-NDY24_20920;Name=NDY24_20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20920 CP098602.1 Protein Homology CDS 4832327 4834669 . - 0 ID=cds-UUE98124.1;Parent=gene-NDY24_20920;Dbxref=NCBI_GP:UUE98124.1;Name=UUE98124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303209.1;locus_tag=NDY24_20920;product=EAL domain-containing protein;protein_id=UUE98124.1;transl_table=11 CP098602.1 Genbank gene 4834676 4835752 . - . ID=gene-NDY24_20925;Name=NDY24_20925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20925 CP098602.1 Protein Homology CDS 4834676 4835752 . - 0 ID=cds-UUE98125.1;Parent=gene-NDY24_20925;Dbxref=NCBI_GP:UUE98125.1;Name=UUE98125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914919.1;locus_tag=NDY24_20925;product=chemotaxis response regulator protein-glutamate methylesterase;protein_id=UUE98125.1;transl_table=11 CP098602.1 Genbank gene 4835749 4836345 . - . ID=gene-NDY24_20930;Name=cheD;gbkey=Gene;gene=cheD;gene_biotype=protein_coding;locus_tag=NDY24_20930 CP098602.1 Protein Homology CDS 4835749 4836345 . - 0 ID=cds-UUE98126.1;Parent=gene-NDY24_20930;Dbxref=NCBI_GP:UUE98126.1;Name=UUE98126.1;Ontology_term=GO:0006935,GO:0050568;gbkey=CDS;gene=cheD;go_function=protein-glutamine glutaminase activity|0050568||IEA;go_process=chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486330.1;locus_tag=NDY24_20930;product=chemoreceptor glutamine deamidase CheD;protein_id=UUE98126.1;transl_table=11 CP098602.1 Genbank gene 4836342 4837244 . - . ID=gene-NDY24_20935;Name=NDY24_20935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20935 CP098602.1 Protein Homology CDS 4836342 4837244 . - 0 ID=cds-UUE98127.1;Parent=gene-NDY24_20935;Dbxref=NCBI_GP:UUE98127.1;Name=UUE98127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302811.1;locus_tag=NDY24_20935;product=chemotaxis protein CheR;protein_id=UUE98127.1;transl_table=11 CP098602.1 Genbank gene 4837447 4839825 . - . ID=gene-NDY24_20940;Name=NDY24_20940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20940 CP098602.1 Protein Homology CDS 4837447 4839825 . - 0 ID=cds-UUE98128.1;Parent=gene-NDY24_20940;Dbxref=NCBI_GP:UUE98128.1;Name=UUE98128.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486335.1;locus_tag=NDY24_20940;product=methyl-accepting chemotaxis protein;protein_id=UUE98128.1;transl_table=11 CP098602.1 Genbank gene 4839910 4840293 . - . ID=gene-NDY24_20945;Name=NDY24_20945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20945 CP098602.1 Protein Homology CDS 4839910 4840293 . - 0 ID=cds-UUE98129.1;Parent=gene-NDY24_20945;Dbxref=NCBI_GP:UUE98129.1;Name=UUE98129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486337.1;locus_tag=NDY24_20945;product=hypothetical protein;protein_id=UUE98129.1;transl_table=11 CP098602.1 Genbank gene 4840607 4841038 . - . ID=gene-NDY24_20950;Name=NDY24_20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20950 CP098602.1 Protein Homology CDS 4840607 4841038 . - 0 ID=cds-UUF00496.1;Parent=gene-NDY24_20950;Dbxref=NCBI_GP:UUF00496.1;Name=UUF00496.1;Ontology_term=GO:0006935,GO:0007165;gbkey=CDS;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006365152.1;locus_tag=NDY24_20950;product=chemotaxis protein CheW;protein_id=UUF00496.1;transl_table=11 CP098602.1 Genbank gene 4841240 4842025 . - . ID=gene-NDY24_20955;Name=NDY24_20955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20955 CP098602.1 Protein Homology CDS 4841240 4842025 . - 0 ID=cds-UUE98130.1;Parent=gene-NDY24_20955;Dbxref=NCBI_GP:UUE98130.1;Name=UUE98130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159446.1;locus_tag=NDY24_20955;product=flagellar brake protein;protein_id=UUE98130.1;transl_table=11 CP098602.1 Genbank gene 4843039 4845711 . - . ID=gene-NDY24_20960;Name=NDY24_20960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20960 CP098602.1 Protein Homology CDS 4843039 4845711 . - 0 ID=cds-UUE98131.1;Parent=gene-NDY24_20960;Dbxref=NCBI_GP:UUE98131.1;Name=UUE98131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993873.1;locus_tag=NDY24_20960;product=Cache 3/Cache 2 fusion domain-containing protein;protein_id=UUE98131.1;transl_table=11 CP098602.1 Genbank pseudogene 4846059 4848318 . - . ID=gene-NDY24_20965;Name=NDY24_20965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_20965;pseudo=true CP098602.1 Protein Homology CDS 4846059 4848318 . - 0 ID=cds-NDY24_20965;Parent=gene-NDY24_20965;Note=frameshifted;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155261.1;locus_tag=NDY24_20965;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4848847 4851106 . - . ID=gene-NDY24_20970;Name=NDY24_20970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_20970;pseudo=true CP098602.1 Protein Homology CDS 4848847 4851106 . - 0 ID=cds-NDY24_20970;Parent=gene-NDY24_20970;Note=frameshifted;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155261.1;locus_tag=NDY24_20970;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4851577 4854057 . - . ID=gene-NDY24_20975;Name=NDY24_20975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_20975;pseudo=true CP098602.1 Protein Homology CDS 4851577 4854057 . - 0 ID=cds-NDY24_20975;Parent=gene-NDY24_20975;Note=frameshifted;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113373.1;locus_tag=NDY24_20975;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4854147 4856396 . - . ID=gene-NDY24_20980;Name=NDY24_20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20980 CP098602.1 Protein Homology CDS 4854147 4856396 . - 0 ID=cds-UUE98132.1;Parent=gene-NDY24_20980;Dbxref=NCBI_GP:UUE98132.1;Name=UUE98132.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037047.1;locus_tag=NDY24_20980;product=methyl-accepting chemotaxis protein;protein_id=UUE98132.1;transl_table=11 CP098602.1 Genbank gene 4856786 4858537 . - . ID=gene-NDY24_20985;Name=NDY24_20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20985 CP098602.1 Protein Homology CDS 4856786 4858537 . - 0 ID=cds-UUF00497.1;Parent=gene-NDY24_20985;Dbxref=NCBI_GP:UUF00497.1;Name=UUF00497.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453181.1;locus_tag=NDY24_20985;product=methyl-accepting chemotaxis protein;protein_id=UUF00497.1;transl_table=11 CP098602.1 Genbank gene 4858664 4858825 . - . ID=gene-NDY24_20990;Name=NDY24_20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20990 CP098602.1 GeneMarkS-2+ CDS 4858664 4858825 . - 0 ID=cds-UUE98133.1;Parent=gene-NDY24_20990;Dbxref=NCBI_GP:UUE98133.1;Name=UUE98133.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_20990;product=hypothetical protein;protein_id=UUE98133.1;transl_table=11 CP098602.1 Genbank gene 4858824 4859084 . + . ID=gene-NDY24_20995;Name=NDY24_20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_20995 CP098602.1 GeneMarkS-2+ CDS 4858824 4859084 . + 0 ID=cds-UUE98134.1;Parent=gene-NDY24_20995;Dbxref=NCBI_GP:UUE98134.1;Name=UUE98134.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_20995;product=hypothetical protein;protein_id=UUE98134.1;transl_table=11 CP098602.1 Genbank pseudogene 4859411 4862146 . - . ID=gene-NDY24_21000;Name=NDY24_21000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_21000;pseudo=true CP098602.1 Protein Homology CDS 4859411 4862146 . - 0 ID=cds-NDY24_21000;Parent=gene-NDY24_21000;Note=frameshifted;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995107.1;locus_tag=NDY24_21000;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4862204 4864329 . - . ID=gene-NDY24_21005;Name=NDY24_21005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_21005;pseudo=true CP098602.1 Protein Homology CDS 4862204 4864329 . - 0 ID=cds-NDY24_21005;Parent=gene-NDY24_21005;Note=frameshifted;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507632.1;locus_tag=NDY24_21005;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4864739 4865272 . - . ID=gene-NDY24_21010;Name=NDY24_21010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21010 CP098602.1 Protein Homology CDS 4864739 4865272 . - 0 ID=cds-UUE98135.1;Parent=gene-NDY24_21010;Dbxref=NCBI_GP:UUE98135.1;Name=UUE98135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051219.1;locus_tag=NDY24_21010;product=hypothetical protein;protein_id=UUE98135.1;transl_table=11 CP098602.1 Genbank gene 4865965 4868112 . - . ID=gene-NDY24_21015;Name=NDY24_21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21015 CP098602.1 Protein Homology CDS 4865965 4868112 . - 0 ID=cds-UUE98136.1;Parent=gene-NDY24_21015;Dbxref=NCBI_GP:UUE98136.1;Name=UUE98136.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463128.1;locus_tag=NDY24_21015;product=methyl-accepting chemotaxis protein;protein_id=UUE98136.1;transl_table=11 CP098602.1 Genbank gene 4868773 4870773 . - . ID=gene-NDY24_21020;Name=NDY24_21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21020 CP098602.1 Protein Homology CDS 4868773 4870773 . - 0 ID=cds-UUE98137.1;Parent=gene-NDY24_21020;Dbxref=NCBI_GP:UUE98137.1;Name=UUE98137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008577777.1;locus_tag=NDY24_21020;product=chemotaxis protein CheA;protein_id=UUE98137.1;transl_table=11 CP098602.1 Genbank gene 4870807 4871172 . - . ID=gene-NDY24_21025;Name=NDY24_21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21025 CP098602.1 Protein Homology CDS 4870807 4871172 . - 0 ID=cds-UUE98138.1;Parent=gene-NDY24_21025;Dbxref=NCBI_GP:UUE98138.1;Name=UUE98138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806565.1;locus_tag=NDY24_21025;product=response regulator;protein_id=UUE98138.1;transl_table=11 CP098602.1 Genbank gene 4871169 4871477 . - . ID=gene-NDY24_21030;Name=NDY24_21030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21030 CP098602.1 Protein Homology CDS 4871169 4871477 . - 0 ID=cds-UUE98139.1;Parent=gene-NDY24_21030;Dbxref=NCBI_GP:UUE98139.1;Name=UUE98139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302363.1;locus_tag=NDY24_21030;product=STAS domain-containing protein;protein_id=UUE98139.1;transl_table=11 CP098602.1 Genbank gene 4871581 4872816 . - . ID=gene-NDY24_21035;Name=NDY24_21035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21035 CP098602.1 Protein Homology CDS 4871581 4872816 . - 0 ID=cds-UUE98140.1;Parent=gene-NDY24_21035;Dbxref=NCBI_GP:UUE98140.1;Name=UUE98140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489694.1;locus_tag=NDY24_21035;product=chemotaxis protein CheW;protein_id=UUE98140.1;transl_table=11 CP098602.1 Genbank gene 4872813 4873595 . - . ID=gene-NDY24_21040;Name=NDY24_21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21040 CP098602.1 Protein Homology CDS 4872813 4873595 . - 0 ID=cds-UUE98141.1;Parent=gene-NDY24_21040;Dbxref=NCBI_GP:UUE98141.1;Name=UUE98141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503257.1;locus_tag=NDY24_21040;product=ParA family protein;protein_id=UUE98141.1;transl_table=11 CP098602.1 Genbank gene 4873597 4874571 . - . ID=gene-NDY24_21045;Name=motD;gbkey=Gene;gene=motD;gene_biotype=protein_coding;locus_tag=NDY24_21045 CP098602.1 Protein Homology CDS 4873597 4874571 . - 0 ID=cds-UUE98142.1;Parent=gene-NDY24_21045;Dbxref=NCBI_GP:UUE98142.1;Name=UUE98142.1;gbkey=CDS;gene=motD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005931860.1;locus_tag=NDY24_21045;product=flagellar motor protein MotD;protein_id=UUE98142.1;transl_table=11 CP098602.1 Genbank gene 4874579 4875319 . - . ID=gene-NDY24_21050;Name=NDY24_21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21050 CP098602.1 Protein Homology CDS 4874579 4875319 . - 0 ID=cds-UUE98143.1;Parent=gene-NDY24_21050;Dbxref=NCBI_GP:UUE98143.1;Name=UUE98143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806574.1;locus_tag=NDY24_21050;product=flagellar motor protein;protein_id=UUE98143.1;transl_table=11 CP098602.1 Genbank pseudogene 4875947 4876153 . + . ID=gene-NDY24_21055;Name=NDY24_21055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_21055;pseudo=true CP098602.1 Protein Homology CDS 4875947 4876153 . + 0 ID=cds-NDY24_21055;Parent=gene-NDY24_21055;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010952670.1;locus_tag=NDY24_21055;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4876223 4876732 . + . ID=gene-NDY24_21060;Name=NDY24_21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21060 CP098602.1 Protein Homology CDS 4876223 4876732 . + 0 ID=cds-UUF00498.1;Parent=gene-NDY24_21060;Dbxref=NCBI_GP:UUF00498.1;Name=UUF00498.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:TIGR02607.1;locus_tag=NDY24_21060;product=HigA family addiction module antitoxin;protein_id=UUF00498.1;transl_table=11 CP098602.1 Genbank gene 4876674 4877540 . - . ID=gene-NDY24_21065;Name=NDY24_21065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21065 CP098602.1 Protein Homology CDS 4876674 4877540 . - 0 ID=cds-UUE98144.1;Parent=gene-NDY24_21065;Dbxref=NCBI_GP:UUE98144.1;Name=UUE98144.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012801.2;locus_tag=NDY24_21065;product=TonB-dependent receptor;protein_id=UUE98144.1;transl_table=11 CP098602.1 Genbank gene 4877444 4878490 . - . ID=gene-NDY24_21070;Name=NDY24_21070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21070 CP098602.1 Protein Homology CDS 4877444 4878490 . - 0 ID=cds-UUE98145.1;Parent=gene-NDY24_21070;Dbxref=NCBI_GP:UUE98145.1;Name=UUE98145.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012801.2;locus_tag=NDY24_21070;product=TonB-dependent receptor;protein_id=UUE98145.1;transl_table=11 CP098602.1 Genbank gene 4878902 4879408 . - . ID=gene-NDY24_21075;Name=NDY24_21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21075 CP098602.1 GeneMarkS-2+ CDS 4878902 4879408 . - 0 ID=cds-UUE98146.1;Parent=gene-NDY24_21075;Dbxref=NCBI_GP:UUE98146.1;Name=UUE98146.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_21075;product=hypothetical protein;protein_id=UUE98146.1;transl_table=11 CP098602.1 Genbank gene 4879435 4879830 . - . ID=gene-NDY24_21080;Name=NDY24_21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21080 CP098602.1 GeneMarkS-2+ CDS 4879435 4879830 . - 0 ID=cds-UUE98147.1;Parent=gene-NDY24_21080;Dbxref=NCBI_GP:UUE98147.1;Name=UUE98147.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_21080;product=hypothetical protein;protein_id=UUE98147.1;transl_table=11 CP098602.1 Genbank gene 4880526 4881053 . - . ID=gene-NDY24_21085;Name=NDY24_21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21085 CP098602.1 GeneMarkS-2+ CDS 4880526 4881053 . - 0 ID=cds-UUE98148.1;Parent=gene-NDY24_21085;Dbxref=NCBI_GP:UUE98148.1;Name=UUE98148.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_21085;product=hypothetical protein;protein_id=UUE98148.1;transl_table=11 CP098602.1 Genbank gene 4881050 4882303 . - . ID=gene-NDY24_21090;Name=NDY24_21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21090 CP098602.1 GeneMarkS-2+ CDS 4881050 4882303 . - 0 ID=cds-UUE98149.1;Parent=gene-NDY24_21090;Dbxref=NCBI_GP:UUE98149.1;Name=UUE98149.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_21090;product=hypothetical protein;protein_id=UUE98149.1;transl_table=11 CP098602.1 Genbank pseudogene 4882300 4883189 . - . ID=gene-NDY24_21095;Name=NDY24_21095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_21095;pseudo=true CP098602.1 Protein Homology CDS 4882300 4883189 . - 0 ID=cds-NDY24_21095;Parent=gene-NDY24_21095;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019659375.1;locus_tag=NDY24_21095;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4883754 4884509 . - . ID=gene-NDY24_21100;Name=NDY24_21100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21100 CP098602.1 Protein Homology CDS 4883754 4884509 . - 0 ID=cds-UUE98150.1;Parent=gene-NDY24_21100;Dbxref=NCBI_GP:UUE98150.1;Name=UUE98150.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019846.2;locus_tag=NDY24_21100;product=class I SAM-dependent methyltransferase;protein_id=UUE98150.1;transl_table=11 CP098602.1 Genbank gene 4884612 4885874 . - . ID=gene-NDY24_21105;Name=NDY24_21105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21105 CP098602.1 Protein Homology CDS 4884612 4885874 . - 0 ID=cds-UUF00499.1;Parent=gene-NDY24_21105;Dbxref=NCBI_GP:UUF00499.1;Name=UUF00499.1;Ontology_term=GO:0009058,GO:0008909,GO:0043904;gbkey=CDS;go_function=isochorismate synthase activity|0008909||IEA,isochorismate pyruvate lyase activity|0043904||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:TIGR03494.1;locus_tag=NDY24_21105;product=salicylate synthase;protein_id=UUF00499.1;transl_table=11 CP098602.1 Genbank pseudogene 4885989 4887580 . - . ID=gene-NDY24_21110;Name=NDY24_21110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_21110;pseudo=true CP098602.1 Protein Homology CDS 4885989 4887580 . - 0 ID=cds-NDY24_21110;Parent=gene-NDY24_21110;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001088826.1;locus_tag=NDY24_21110;product=AMP-binding protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4887599 4888051 . - . ID=gene-NDY24_21115;Name=NDY24_21115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21115 CP098602.1 Protein Homology CDS 4887599 4888051 . - 0 ID=cds-UUF00500.1;Parent=gene-NDY24_21115;Dbxref=NCBI_GP:UUF00500.1;Name=UUF00500.1;Ontology_term=GO:0009058;gbkey=CDS;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF013166.2;locus_tag=NDY24_21115;product=thioesterase domain-containing protein;protein_id=UUF00500.1;transl_table=11 CP098602.1 Genbank gene 4887940 4889469 . - . ID=gene-NDY24_21120;Name=NDY24_21120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21120 CP098602.1 Protein Homology CDS 4887940 4889469 . - 0 ID=cds-UUE98151.1;Parent=gene-NDY24_21120;Dbxref=NCBI_GP:UUE98151.1;Name=UUE98151.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:TIGR01761.1;locus_tag=NDY24_21120;product=Gfo/Idh/MocA family oxidoreductase;protein_id=UUE98151.1;transl_table=11 CP098602.1 Genbank gene 4889495 4889707 . - . ID=gene-NDY24_21125;Name=NDY24_21125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21125 CP098602.1 GeneMarkS-2+ CDS 4889495 4889707 . - 0 ID=cds-UUE98152.1;Parent=gene-NDY24_21125;Dbxref=NCBI_GP:UUE98152.1;Name=UUE98152.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_21125;product=hypothetical protein;protein_id=UUE98152.1;transl_table=11 CP098602.1 Genbank gene 4889689 4890507 . - . ID=gene-NDY24_21130;Name=NDY24_21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21130 CP098602.1 Protein Homology CDS 4889689 4890507 . - 0 ID=cds-UUF00501.1;Parent=gene-NDY24_21130;Dbxref=NCBI_GP:UUF00501.1;Name=UUF00501.1;Ontology_term=GO:0009058;gbkey=CDS;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF013166.2;locus_tag=NDY24_21130;product=thioesterase domain-containing protein;protein_id=UUF00501.1;transl_table=11 CP098602.1 Genbank gene 4890407 4890892 . + . ID=gene-NDY24_21135;Name=NDY24_21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21135 CP098602.1 GeneMarkS-2+ CDS 4890407 4890892 . + 0 ID=cds-UUF00526.1;Parent=gene-NDY24_21135;Dbxref=NCBI_GP:UUF00526.1;Name=UUF00526.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_21135;product=hypothetical protein;protein_id=UUF00526.1;transl_table=11 CP098602.1 Genbank gene 4891014 4891313 . + . ID=gene-NDY24_21140;Name=NDY24_21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21140 CP098602.1 GeneMarkS-2+ CDS 4891014 4891313 . + 0 ID=cds-UUE98153.1;Parent=gene-NDY24_21140;Dbxref=NCBI_GP:UUE98153.1;Name=UUE98153.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_21140;product=hypothetical protein;protein_id=UUE98153.1;transl_table=11 CP098602.1 Genbank gene 4891278 4893164 . - . ID=gene-NDY24_21145;Name=NDY24_21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21145 CP098602.1 Protein Homology CDS 4891278 4893164 . - 0 ID=cds-UUE98154.1;Parent=gene-NDY24_21145;Dbxref=NCBI_GP:UUE98154.1;Name=UUE98154.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012873.2;locus_tag=NDY24_21145;product=condensation domain-containing protein;protein_id=UUE98154.1;transl_table=11 CP098602.1 Genbank gene 4893199 4893615 . - . ID=gene-NDY24_21150;Name=NDY24_21150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21150 CP098602.1 Protein Homology CDS 4893199 4893615 . - 0 ID=cds-UUE98155.1;Parent=gene-NDY24_21150;Dbxref=NCBI_GP:UUE98155.1;Name=UUE98155.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012759.2;locus_tag=NDY24_21150;product=phosphopantetheine-binding protein;protein_id=UUE98155.1;transl_table=11 CP098602.1 Genbank gene 4893612 4896383 . - . ID=gene-NDY24_21155;Name=NDY24_21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21155 CP098602.1 Protein Homology CDS 4893612 4896383 . - 0 ID=cds-UUE98156.1;Parent=gene-NDY24_21155;Dbxref=NCBI_GP:UUE98156.1;Name=UUE98156.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020243.2;locus_tag=NDY24_21155;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=UUE98156.1;transl_table=11 CP098602.1 Genbank gene 4896369 4896533 . + . ID=gene-NDY24_21160;Name=NDY24_21160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21160 CP098602.1 GeneMarkS-2+ CDS 4896369 4896533 . + 0 ID=cds-UUE98157.1;Parent=gene-NDY24_21160;Dbxref=NCBI_GP:UUE98157.1;Name=UUE98157.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_21160;product=hypothetical protein;protein_id=UUE98157.1;transl_table=11 CP098602.1 Genbank gene 4896728 4897591 . - . ID=gene-NDY24_21165;Name=NDY24_21165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21165 CP098602.1 Protein Homology CDS 4896728 4897591 . - 0 ID=cds-UUE98158.1;Parent=gene-NDY24_21165;Dbxref=NCBI_GP:UUE98158.1;Name=UUE98158.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012901.2;locus_tag=NDY24_21165;product=acyltransferase domain-containing protein;protein_id=UUE98158.1;transl_table=11 CP098602.1 Genbank gene 4898278 4898934 . - . ID=gene-NDY24_21170;Name=NDY24_21170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21170 CP098602.1 Protein Homology CDS 4898278 4898934 . - 0 ID=cds-UUE98159.1;Parent=gene-NDY24_21170;Dbxref=NCBI_GP:UUE98159.1;Name=UUE98159.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012337.2;locus_tag=NDY24_21170;product=hypothetical protein;protein_id=UUE98159.1;transl_table=11 CP098602.1 Genbank gene 4899330 4899686 . - . ID=gene-NDY24_21175;Name=NDY24_21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21175 CP098602.1 GeneMarkS-2+ CDS 4899330 4899686 . - 0 ID=cds-UUE98160.1;Parent=gene-NDY24_21175;Dbxref=NCBI_GP:UUE98160.1;Name=UUE98160.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_21175;product=hypothetical protein;protein_id=UUE98160.1;transl_table=11 CP098602.1 Genbank gene 4899808 4900203 . - . ID=gene-NDY24_21180;Name=NDY24_21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21180 CP098602.1 GeneMarkS-2+ CDS 4899808 4900203 . - 0 ID=cds-UUE98161.1;Parent=gene-NDY24_21180;Dbxref=NCBI_GP:UUE98161.1;Name=UUE98161.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_21180;product=hypothetical protein;protein_id=UUE98161.1;transl_table=11 CP098602.1 Genbank gene 4900158 4900979 . - . ID=gene-NDY24_21185;Name=NDY24_21185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21185 CP098602.1 Protein Homology CDS 4900158 4900979 . - 0 ID=cds-UUE98162.1;Parent=gene-NDY24_21185;Dbxref=NCBI_GP:UUE98162.1;Name=UUE98162.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012759.2;locus_tag=NDY24_21185;product=phosphopantetheine-binding protein;protein_id=UUE98162.1;transl_table=11 CP098602.1 Genbank gene 4901002 4901370 . - . ID=gene-NDY24_21190;Name=NDY24_21190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21190 CP098602.1 GeneMarkS-2+ CDS 4901002 4901370 . - 0 ID=cds-UUE98163.1;Parent=gene-NDY24_21190;Dbxref=NCBI_GP:UUE98163.1;Name=UUE98163.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_21190;product=hypothetical protein;protein_id=UUE98163.1;transl_table=11 CP098602.1 Genbank gene 4901737 4903935 . - . ID=gene-NDY24_21195;Name=NDY24_21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21195 CP098602.1 Protein Homology CDS 4901737 4903935 . - 0 ID=cds-UUE98164.1;Parent=gene-NDY24_21195;Dbxref=NCBI_GP:UUE98164.1;Name=UUE98164.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.2;locus_tag=NDY24_21195;product=AMP-binding protein;protein_id=UUE98164.1;transl_table=11 CP098602.1 Genbank gene 4903835 4906420 . - . ID=gene-NDY24_21200;Name=NDY24_21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21200 CP098602.1 Protein Homology CDS 4903835 4906420 . - 0 ID=cds-UUE98165.1;Parent=gene-NDY24_21200;Dbxref=NCBI_GP:UUE98165.1;Name=UUE98165.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012873.2;locus_tag=NDY24_21200;product=AMP-binding protein;protein_id=UUE98165.1;transl_table=11 CP098602.1 Genbank gene 4906821 4907171 . - . ID=gene-NDY24_21205;Name=NDY24_21205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21205 CP098602.1 GeneMarkS-2+ CDS 4906821 4907171 . - 0 ID=cds-UUE98166.1;Parent=gene-NDY24_21205;Dbxref=NCBI_GP:UUE98166.1;Name=UUE98166.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_21205;product=hypothetical protein;protein_id=UUE98166.1;transl_table=11 CP098602.1 Genbank gene 4907449 4907925 . - . ID=gene-NDY24_21210;Name=NDY24_21210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21210 CP098602.1 Protein Homology CDS 4907449 4907925 . - 0 ID=cds-UUE98167.1;Parent=gene-NDY24_21210;Dbxref=NCBI_GP:UUE98167.1;Name=UUE98167.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024242.2;locus_tag=NDY24_21210;product=helix-turn-helix transcriptional regulator;protein_id=UUE98167.1;transl_table=11 CP098602.1 Genbank gene 4908749 4909030 . + . ID=gene-NDY24_21215;Name=NDY24_21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21215 CP098602.1 GeneMarkS-2+ CDS 4908749 4909030 . + 0 ID=cds-UUE98168.1;Parent=gene-NDY24_21215;Dbxref=NCBI_GP:UUE98168.1;Name=UUE98168.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_21215;product=hypothetical protein;protein_id=UUE98168.1;transl_table=11 CP098602.1 Genbank gene 4909008 4909451 . + . ID=gene-NDY24_21220;Name=NDY24_21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21220 CP098602.1 Protein Homology CDS 4909008 4909451 . + 0 ID=cds-UUE98169.1;Parent=gene-NDY24_21220;Dbxref=NCBI_GP:UUE98169.1;Name=UUE98169.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019335.2;locus_tag=NDY24_21220;product=TonB-dependent receptor plug domain-containing protein;protein_id=UUE98169.1;transl_table=11 CP098602.1 Genbank gene 4909517 4909681 . + . ID=gene-NDY24_21225;Name=NDY24_21225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21225 CP098602.1 GeneMarkS-2+ CDS 4909517 4909681 . + 0 ID=cds-UUE98170.1;Parent=gene-NDY24_21225;Dbxref=NCBI_GP:UUE98170.1;Name=UUE98170.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_21225;product=hypothetical protein;protein_id=UUE98170.1;transl_table=11 CP098602.1 Genbank gene 4909689 4910927 . + . ID=gene-NDY24_21230;Name=NDY24_21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21230 CP098602.1 Protein Homology CDS 4909689 4910927 . + 0 ID=cds-UUE98171.1;Parent=gene-NDY24_21230;Dbxref=NCBI_GP:UUE98171.1;Name=UUE98171.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012801.2;locus_tag=NDY24_21230;product=TonB-dependent receptor;protein_id=UUE98171.1;transl_table=11 CP098602.1 Genbank gene 4911036 4911755 . + . ID=gene-NDY24_21235;Name=NDY24_21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21235 CP098602.1 GeneMarkS-2+ CDS 4911036 4911755 . + 0 ID=cds-UUE98172.1;Parent=gene-NDY24_21235;Dbxref=NCBI_GP:UUE98172.1;Name=UUE98172.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_21235;product=hypothetical protein;protein_id=UUE98172.1;transl_table=11 CP098602.1 Genbank gene 4912015 4912266 . + . ID=gene-NDY24_21240;Name=NDY24_21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21240 CP098602.1 Protein Homology CDS 4912015 4912266 . + 0 ID=cds-UUE98173.1;Parent=gene-NDY24_21240;Dbxref=NCBI_GP:UUE98173.1;Name=UUE98173.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=NDY24_21240;product=ATP-binding cassette domain-containing protein;protein_id=UUE98173.1;transl_table=11 CP098602.1 Genbank gene 4912266 4912598 . + . ID=gene-NDY24_21245;Name=NDY24_21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21245 CP098602.1 Protein Homology CDS 4912266 4912598 . + 0 ID=cds-UUE98174.1;Parent=gene-NDY24_21245;Dbxref=NCBI_GP:UUE98174.1;Name=UUE98174.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=NDY24_21245;product=ATP-binding cassette domain-containing protein;protein_id=UUE98174.1;transl_table=11 CP098602.1 Genbank gene 4912654 4912839 . + . ID=gene-NDY24_21250;Name=NDY24_21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21250 CP098602.1 GeneMarkS-2+ CDS 4912654 4912839 . + 0 ID=cds-UUE98175.1;Parent=gene-NDY24_21250;Dbxref=NCBI_GP:UUE98175.1;Name=UUE98175.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_21250;product=hypothetical protein;protein_id=UUE98175.1;transl_table=11 CP098602.1 Genbank gene 4912858 4913238 . + . ID=gene-NDY24_21255;Name=NDY24_21255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21255 CP098602.1 GeneMarkS-2+ CDS 4912858 4913238 . + 0 ID=cds-UUE98176.1;Parent=gene-NDY24_21255;Dbxref=NCBI_GP:UUE98176.1;Name=UUE98176.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_21255;product=hypothetical protein;protein_id=UUE98176.1;transl_table=11 CP098602.1 Genbank gene 4913163 4913945 . + . ID=gene-NDY24_21260;Name=NDY24_21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21260 CP098602.1 GeneMarkS-2+ CDS 4913163 4913945 . + 0 ID=cds-UUE98177.1;Parent=gene-NDY24_21260;Dbxref=NCBI_GP:UUE98177.1;Name=UUE98177.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_21260;product=hypothetical protein;protein_id=UUE98177.1;transl_table=11 CP098602.1 Genbank gene 4913888 4914553 . + . ID=gene-NDY24_21265;Name=NDY24_21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21265 CP098602.1 Protein Homology CDS 4913888 4914553 . + 0 ID=cds-UUE98178.1;Parent=gene-NDY24_21265;Dbxref=NCBI_GP:UUE98178.1;Name=UUE98178.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=NDY24_21265;product=ATP-binding cassette domain-containing protein;protein_id=UUE98178.1;transl_table=11 CP098602.1 Genbank pseudogene 4914812 4916472 . - . ID=gene-NDY24_21270;Name=NDY24_21270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_21270;pseudo=true CP098602.1 Protein Homology CDS 4914812 4916472 . - 0 ID=cds-NDY24_21270;Parent=gene-NDY24_21270;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304939.1;locus_tag=NDY24_21270;product=chemotaxis protein CheA;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4916475 4917101 . - . ID=gene-NDY24_21275;Name=NDY24_21275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21275 CP098602.1 Protein Homology CDS 4916475 4917101 . - 0 ID=cds-UUE98179.1;Parent=gene-NDY24_21275;Dbxref=NCBI_GP:UUE98179.1;Name=UUE98179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302999.1;locus_tag=NDY24_21275;product=protein phosphatase CheZ;protein_id=UUE98179.1;transl_table=11 CP098602.1 Genbank gene 4917101 4917493 . - . ID=gene-NDY24_21280;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=NDY24_21280 CP098602.1 Protein Homology CDS 4917101 4917493 . - 0 ID=cds-UUE98180.1;Parent=gene-NDY24_21280;Dbxref=NCBI_GP:UUE98180.1;Name=UUE98180.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507662.1;locus_tag=NDY24_21280;product=chemotaxis response regulator CheY;protein_id=UUE98180.1;transl_table=11 CP098602.1 Genbank gene 4917529 4918251 . - . ID=gene-NDY24_21285;Name=NDY24_21285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21285 CP098602.1 Protein Homology CDS 4917529 4918251 . - 0 ID=cds-UUE98181.1;Parent=gene-NDY24_21285;Dbxref=NCBI_GP:UUE98181.1;Name=UUE98181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003470191.1;locus_tag=NDY24_21285;product=RNA polymerase sigma factor FliA;protein_id=UUE98181.1;transl_table=11 CP098602.1 Genbank pseudogene 4918302 4919183 . - . ID=gene-NDY24_21290;Name=NDY24_21290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_21290;pseudo=true CP098602.1 Protein Homology CDS 4918302 4919183 . - 0 ID=cds-NDY24_21290;Parent=gene-NDY24_21290;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374294.1;locus_tag=NDY24_21290;product=MinD/ParA family protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4919170 4920808 . - . ID=gene-NDY24_21295;Name=flhF;gbkey=Gene;gene=flhF;gene_biotype=pseudogene;locus_tag=NDY24_21295;pseudo=true CP098602.1 Protein Homology CDS 4919170 4920808 . - 0 ID=cds-NDY24_21295;Parent=gene-NDY24_21295;Note=frameshifted;Ontology_term=GO:0006614,GO:0044781,GO:0003924,GO:0005525;gbkey=CDS;gene=flhF;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161924.1;locus_tag=NDY24_21295;product=flagellar biosynthesis protein FlhF;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4921398 4923491 . - . ID=gene-NDY24_21300;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=NDY24_21300 CP098602.1 Protein Homology CDS 4921398 4923491 . - 0 ID=cds-UUE98182.1;Parent=gene-NDY24_21300;Dbxref=NCBI_GP:UUE98182.1;Name=UUE98182.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=flhA;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302100.1;locus_tag=NDY24_21300;product=flagellar biosynthesis protein FlhA;protein_id=UUE98182.1;transl_table=11 CP098602.1 Genbank gene 4923488 4924618 . - . ID=gene-NDY24_21305;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=NDY24_21305 CP098602.1 Protein Homology CDS 4923488 4924618 . - 0 ID=cds-UUE98183.1;Parent=gene-NDY24_21305;Dbxref=NCBI_GP:UUE98183.1;Name=UUE98183.1;Ontology_term=GO:0001539;gbkey=CDS;gene=flhB;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921357.1;locus_tag=NDY24_21305;product=flagellar biosynthesis protein FlhB;protein_id=UUE98183.1;transl_table=11 CP098602.1 Genbank pseudogene 4924982 4926517 . - . ID=gene-NDY24_21310;Name=NDY24_21310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_21310;pseudo=true CP098602.1 Protein Homology CDS 4924982 4926517 . - 0 ID=cds-NDY24_21310;Parent=gene-NDY24_21310;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007970797.1;locus_tag=NDY24_21310;product=EAL domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4926619 4929540 . - . ID=gene-NDY24_21315;Name=NDY24_21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21315 CP098602.1 Protein Homology CDS 4926619 4929540 . - 0 ID=cds-UUF00502.1;Parent=gene-NDY24_21315;Dbxref=NCBI_GP:UUF00502.1;Name=UUF00502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090104.1;locus_tag=NDY24_21315;product=diguanylate cyclase;protein_id=UUF00502.1;transl_table=11 CP098602.1 Genbank gene 4929831 4932779 . - . ID=gene-NDY24_21320;Name=NDY24_21320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21320 CP098602.1 Protein Homology CDS 4929831 4932779 . - 0 ID=cds-UUE98184.1;Parent=gene-NDY24_21320;Dbxref=NCBI_GP:UUE98184.1;Name=UUE98184.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449773.1;locus_tag=NDY24_21320;product=diguanylate cyclase;protein_id=UUE98184.1;transl_table=11 CP098602.1 Genbank gene 4932887 4933678 . - . ID=gene-NDY24_21325;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=NDY24_21325 CP098602.1 Protein Homology CDS 4932887 4933678 . - 0 ID=cds-UUE98185.1;Parent=gene-NDY24_21325;Dbxref=NCBI_GP:UUE98185.1;Name=UUE98185.1;Ontology_term=GO:0006605,GO:0044780,GO:0016021;gbkey=CDS;gene=fliR;go_component=integral component of membrane|0016021||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449774.1;locus_tag=NDY24_21325;product=flagellar biosynthetic protein FliR;protein_id=UUE98185.1;transl_table=11 CP098602.1 Genbank gene 4933692 4933961 . - . ID=gene-NDY24_21330;Name=NDY24_21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21330 CP098602.1 Protein Homology CDS 4933692 4933961 . - 0 ID=cds-UUE98186.1;Parent=gene-NDY24_21330;Dbxref=NCBI_GP:UUE98186.1;Name=UUE98186.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037081.1;locus_tag=NDY24_21330;product=flagellar biosynthetic protein FliQ;protein_id=UUE98186.1;transl_table=11 CP098602.1 Genbank gene 4934268 4935107 . - . ID=gene-NDY24_21335;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=NDY24_21335 CP098602.1 Protein Homology CDS 4934268 4935107 . - 0 ID=cds-UUE98187.1;Parent=gene-NDY24_21335;Dbxref=NCBI_GP:UUE98187.1;Name=UUE98187.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0001539;gbkey=CDS;gene=fliP;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373751.1;locus_tag=NDY24_21335;product=flagellar type III secretion system pore protein FliP;protein_id=UUE98187.1;transl_table=11 CP098602.1 Genbank gene 4935109 4935516 . - . ID=gene-NDY24_21340;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=NDY24_21340 CP098602.1 Protein Homology CDS 4935109 4935516 . - 0 ID=cds-UUE98188.1;Parent=gene-NDY24_21340;Dbxref=NCBI_GP:UUE98188.1;Name=UUE98188.1;Ontology_term=GO:0044781;gbkey=CDS;gene=fliO;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158024.1;locus_tag=NDY24_21340;product=flagellar biosynthetic protein FliO;protein_id=UUE98188.1;transl_table=11 CP098602.1 Genbank gene 4935513 4935851 . - . ID=gene-NDY24_21345;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=NDY24_21345 CP098602.1 Protein Homology CDS 4935513 4935851 . - 0 ID=cds-UUF00503.1;Parent=gene-NDY24_21345;Dbxref=NCBI_GP:UUF00503.1;Name=UUF00503.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507674.1;locus_tag=NDY24_21345;product=flagellar motor switch protein FliN;protein_id=UUF00503.1;transl_table=11 CP098602.1 Genbank gene 4935848 4936861 . - . ID=gene-NDY24_21350;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=NDY24_21350 CP098602.1 Protein Homology CDS 4935848 4936861 . - 0 ID=cds-UUE98189.1;Parent=gene-NDY24_21350;Dbxref=NCBI_GP:UUE98189.1;Name=UUE98189.1;Ontology_term=GO:0071973,GO:0003774,GO:0009425;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum basal body|0009425||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302238.1;locus_tag=NDY24_21350;product=flagellar motor switch protein FliM;protein_id=UUE98189.1;transl_table=11 CP098602.1 Genbank pseudogene 4936875 4937424 . - . ID=gene-NDY24_21355;Name=NDY24_21355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_21355;pseudo=true CP098602.1 Protein Homology CDS 4936875 4937424 . - 0 ID=cds-NDY24_21355;Parent=gene-NDY24_21355;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158026.1;locus_tag=NDY24_21355;product=flagellar basal body-associated FliL family protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4937591 4938892 . - . ID=gene-NDY24_21360;Name=NDY24_21360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21360 CP098602.1 Protein Homology CDS 4937591 4938892 . - 0 ID=cds-UUE98190.1;Parent=gene-NDY24_21360;Dbxref=NCBI_GP:UUE98190.1;Name=UUE98190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159589.1;locus_tag=NDY24_21360;product=flagellar hook-length control protein FliK;protein_id=UUE98190.1;transl_table=11 CP098602.1 Genbank gene 4938889 4939344 . - . ID=gene-NDY24_21365;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=NDY24_21365 CP098602.1 Protein Homology CDS 4938889 4939344 . - 0 ID=cds-UUE98191.1;Parent=gene-NDY24_21365;Dbxref=NCBI_GP:UUE98191.1;Name=UUE98191.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158028.1;locus_tag=NDY24_21365;product=flagellar export protein FliJ;protein_id=UUE98191.1;transl_table=11 CP098602.1 Genbank gene 4939348 4940730 . - . ID=gene-NDY24_21370;Name=NDY24_21370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21370 CP098602.1 Protein Homology CDS 4939348 4940730 . - 0 ID=cds-UUE98192.1;Parent=gene-NDY24_21370;Dbxref=NCBI_GP:UUE98192.1;Name=UUE98192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904676.1;locus_tag=NDY24_21370;product=FliI/YscN family ATPase;protein_id=UUE98192.1;transl_table=11 CP098602.1 Genbank gene 4940727 4941347 . - . ID=gene-NDY24_21375;Name=NDY24_21375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21375 CP098602.1 Protein Homology CDS 4940727 4941347 . - 0 ID=cds-UUE98193.1;Parent=gene-NDY24_21375;Dbxref=NCBI_GP:UUE98193.1;Name=UUE98193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850279.1;locus_tag=NDY24_21375;product=FliH/SctL family protein;protein_id=UUE98193.1;transl_table=11 CP098602.1 Genbank gene 4941344 4942333 . - . ID=gene-NDY24_21380;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=NDY24_21380 CP098602.1 Protein Homology CDS 4941344 4942333 . - 0 ID=cds-UUF00504.1;Parent=gene-NDY24_21380;Dbxref=NCBI_GP:UUF00504.1;Name=UUF00504.1;Ontology_term=GO:0001539,GO:0006935,GO:0005198,GO:0009433;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum basal body%2C C ring|0009433||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158030.1;locus_tag=NDY24_21380;product=flagellar motor switch protein FliG;protein_id=UUF00504.1;transl_table=11 CP098602.1 Genbank gene 4942344 4944074 . - . ID=gene-NDY24_21385;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=NDY24_21385 CP098602.1 Protein Homology CDS 4942344 4944074 . - 0 ID=cds-UUE98194.1;Parent=gene-NDY24_21385;Dbxref=NCBI_GP:UUE98194.1;Name=UUE98194.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158031.1;locus_tag=NDY24_21385;product=flagellar M-ring protein FliF;protein_id=UUE98194.1;transl_table=11 CP098602.1 Genbank gene 4944088 4944483 . - . ID=gene-NDY24_21390;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=NDY24_21390 CP098602.1 Protein Homology CDS 4944088 4944483 . - 0 ID=cds-UUF00505.1;Parent=gene-NDY24_21390;Dbxref=NCBI_GP:UUF00505.1;Name=UUF00505.1;Ontology_term=GO:0071973,GO:0003774,GO:0005198,GO:0009288;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA,structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005997134.1;locus_tag=NDY24_21390;product=flagellar hook-basal body complex protein FliE;protein_id=UUF00505.1;transl_table=11 CP098602.1 Genbank pseudogene 4945402 4948905 . - . ID=gene-NDY24_21395;Name=NDY24_21395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_21395;pseudo=true CP098602.1 Protein Homology CDS 4945402 4948905 . - 0 ID=cds-NDY24_21395;Parent=gene-NDY24_21395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158033.1;locus_tag=NDY24_21395;product=glycosyltransferase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4949083 4949637 . - . ID=gene-NDY24_21400;Name=NDY24_21400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21400 CP098602.1 Protein Homology CDS 4949083 4949637 . - 0 ID=cds-UUE98195.1;Parent=gene-NDY24_21400;Dbxref=NCBI_GP:UUE98195.1;Name=UUE98195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005997137.1;locus_tag=NDY24_21400;product=methyltransferase domain-containing protein;protein_id=UUE98195.1;transl_table=11 CP098602.1 Genbank gene 4949634 4951448 . - . ID=gene-NDY24_21405;Name=NDY24_21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21405 CP098602.1 GeneMarkS-2+ CDS 4949634 4951448 . - 0 ID=cds-UUE98196.1;Parent=gene-NDY24_21405;Dbxref=NCBI_GP:UUE98196.1;Name=UUE98196.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_21405;product=class I SAM-dependent methyltransferase;protein_id=UUE98196.1;transl_table=11 CP098602.1 Genbank pseudogene 4951550 4952532 . - . ID=gene-NDY24_21410;Name=NDY24_21410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_21410;pseudo=true CP098602.1 Protein Homology CDS 4951550 4952532 . - 0 ID=cds-NDY24_21410;Parent=gene-NDY24_21410;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802510.1;locus_tag=NDY24_21410;product=IS5 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4952739 4954262 . - . ID=gene-NDY24_21415;Name=NDY24_21415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_21415;pseudo=true CP098602.1 Protein Homology CDS 4952739 4954262 . - 0 ID=cds-NDY24_21415;Parent=gene-NDY24_21415;Note=internal stop;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118762.1;locus_tag=NDY24_21415;product=FkbM family methyltransferase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4954259 4954882 . - . ID=gene-NDY24_21420;Name=NDY24_21420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21420 CP098602.1 Protein Homology CDS 4954259 4954882 . - 0 ID=cds-UUE98197.1;Parent=gene-NDY24_21420;Dbxref=NCBI_GP:UUE98197.1;Name=UUE98197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016848712.1;locus_tag=NDY24_21420;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=UUE98197.1;transl_table=11 CP098602.1 Genbank gene 4954872 4956017 . - . ID=gene-NDY24_21425;Name=NDY24_21425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21425 CP098602.1 Protein Homology CDS 4954872 4956017 . - 0 ID=cds-UUE98198.1;Parent=gene-NDY24_21425;Dbxref=NCBI_GP:UUE98198.1;Name=UUE98198.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921325.1;locus_tag=NDY24_21425;product=Rieske 2Fe-2S domain-containing protein;protein_id=UUE98198.1;transl_table=11 CP098602.1 Genbank gene 4956031 4956696 . - . ID=gene-NDY24_21430;Name=NDY24_21430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21430 CP098602.1 Protein Homology CDS 4956031 4956696 . - 0 ID=cds-UUE98199.1;Parent=gene-NDY24_21430;Dbxref=NCBI_GP:UUE98199.1;Name=UUE98199.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005997147.1;locus_tag=NDY24_21430;product=NeuD/PglB/VioB family sugar acetyltransferase;protein_id=UUE98199.1;transl_table=11 CP098602.1 Genbank gene 4956693 4957472 . - . ID=gene-NDY24_21435;Name=NDY24_21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21435 CP098602.1 Protein Homology CDS 4956693 4957472 . - 0 ID=cds-UUE98200.1;Parent=gene-NDY24_21435;Dbxref=NCBI_GP:UUE98200.1;Name=UUE98200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017908527.1;locus_tag=NDY24_21435;product=SDR family oxidoreductase;protein_id=UUE98200.1;transl_table=11 CP098602.1 Genbank gene 4957469 4958233 . - . ID=gene-NDY24_21440;Name=NDY24_21440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21440 CP098602.1 Protein Homology CDS 4957469 4958233 . - 0 ID=cds-UUE98201.1;Parent=gene-NDY24_21440;Dbxref=NCBI_GP:UUE98201.1;Name=UUE98201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090117.1;locus_tag=NDY24_21440;product=SDR family oxidoreductase;protein_id=UUE98201.1;transl_table=11 CP098602.1 Genbank gene 4958233 4959273 . - . ID=gene-NDY24_21445;Name=NDY24_21445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21445 CP098602.1 Protein Homology CDS 4958233 4959273 . - 0 ID=cds-UUE98202.1;Parent=gene-NDY24_21445;Dbxref=NCBI_GP:UUE98202.1;Name=UUE98202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003466860.1;locus_tag=NDY24_21445;product=ketoacyl-ACP synthase III;protein_id=UUE98202.1;transl_table=11 CP098602.1 Genbank pseudogene 4959282 4959503 . - . ID=gene-NDY24_21450;Name=NDY24_21450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_21450;pseudo=true CP098602.1 Protein Homology CDS 4959282 4959503 . - 0 ID=cds-NDY24_21450;Parent=gene-NDY24_21450;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302780.1;locus_tag=NDY24_21450;product=acyl carrier protein;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 4959568 4960678 . - . ID=gene-NDY24_21455;Name=NDY24_21455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_21455;pseudo=true CP098602.1 Protein Homology CDS 4959568 4960678 . - 0 ID=cds-NDY24_21455;Parent=gene-NDY24_21455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373650.1;locus_tag=NDY24_21455;product=DegT/DnrJ/EryC1/StrS family aminotransferase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4960800 4962263 . - . ID=gene-NDY24_21460;Name=NDY24_21460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21460 CP098602.1 Protein Homology CDS 4960800 4962263 . - 0 ID=cds-UUE98203.1;Parent=gene-NDY24_21460;Dbxref=NCBI_GP:UUE98203.1;Name=UUE98203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005932699.1;locus_tag=NDY24_21460;product=sigma-54 dependent transcriptional regulator;protein_id=UUE98203.1;transl_table=11 CP098602.1 Genbank gene 4962277 4962660 . - . ID=gene-NDY24_21465;Name=NDY24_21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21465 CP098602.1 Protein Homology CDS 4962277 4962660 . - 0 ID=cds-UUE98204.1;Parent=gene-NDY24_21465;Dbxref=NCBI_GP:UUE98204.1;Name=UUE98204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904817.1;locus_tag=NDY24_21465;product=response regulator transcription factor;protein_id=UUE98204.1;transl_table=11 CP098602.1 Genbank gene 4962669 4964072 . - . ID=gene-NDY24_21470;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=NDY24_21470 CP098602.1 Protein Homology CDS 4962669 4964072 . - 0 ID=cds-UUE98205.1;Parent=gene-NDY24_21470;Dbxref=NCBI_GP:UUE98205.1;Name=UUE98205.1;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoN;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription%2C initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302731.1;locus_tag=NDY24_21470;product=RNA polymerase factor sigma-54;protein_id=UUE98205.1;transl_table=11 CP098602.1 Genbank gene 4964296 4964928 . - . ID=gene-NDY24_21475;Name=NDY24_21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21475 CP098602.1 Protein Homology CDS 4964296 4964928 . - 0 ID=cds-UUE98206.1;Parent=gene-NDY24_21475;Dbxref=NCBI_GP:UUE98206.1;Name=UUE98206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037101.1;locus_tag=NDY24_21475;product=response regulator transcription factor;protein_id=UUE98206.1;transl_table=11 CP098602.1 Genbank gene 4964999 4965565 . - . ID=gene-NDY24_21480;Name=NDY24_21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21480 CP098602.1 Protein Homology CDS 4964999 4965565 . - 0 ID=cds-UUE98207.1;Parent=gene-NDY24_21480;Dbxref=NCBI_GP:UUE98207.1;Name=UUE98207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154658.1;locus_tag=NDY24_21480;product=PilZ domain-containing protein;protein_id=UUE98207.1;transl_table=11 CP098602.1 Genbank gene 4965565 4965858 . - . ID=gene-NDY24_21485;Name=NDY24_21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21485 CP098602.1 Protein Homology CDS 4965565 4965858 . - 0 ID=cds-UUF00506.1;Parent=gene-NDY24_21485;Dbxref=NCBI_GP:UUF00506.1;Name=UUF00506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154657.1;locus_tag=NDY24_21485;product=hypothetical protein;protein_id=UUF00506.1;transl_table=11 CP098602.1 Genbank gene 4965867 4966280 . - . ID=gene-NDY24_21490;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=NDY24_21490 CP098602.1 Protein Homology CDS 4965867 4966280 . - 0 ID=cds-UUE98208.1;Parent=gene-NDY24_21490;Dbxref=NCBI_GP:UUE98208.1;Name=UUE98208.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliS;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575950.1;locus_tag=NDY24_21490;product=flagellar export chaperone FliS;protein_id=UUE98208.1;transl_table=11 CP098602.1 Genbank gene 4966431 4967756 . - . ID=gene-NDY24_21495;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=NDY24_21495 CP098602.1 Protein Homology CDS 4966431 4967756 . - 0 ID=cds-UUE98209.1;Parent=gene-NDY24_21495;Dbxref=NCBI_GP:UUE98209.1;Name=UUE98209.1;Ontology_term=GO:0009288;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921315.1;locus_tag=NDY24_21495;product=flagellar filament capping protein FliD;protein_id=UUE98209.1;transl_table=11 CP098602.1 Genbank gene 4968005 4969204 . - . ID=gene-NDY24_21500;Name=NDY24_21500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21500 CP098602.1 Protein Homology CDS 4968005 4969204 . - 0 ID=cds-UUE98210.1;Parent=gene-NDY24_21500;Dbxref=NCBI_GP:UUE98210.1;Name=UUE98210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007962409.1;locus_tag=NDY24_21500;product=flagellin;protein_id=UUE98210.1;transl_table=11 CP098602.1 Genbank pseudogene 4969522 4970726 . - . ID=gene-NDY24_21505;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=pseudogene;locus_tag=NDY24_21505;pseudo=true CP098602.1 Protein Homology CDS 4969522 4970726 . - 0 ID=cds-NDY24_21505;Parent=gene-NDY24_21505;Note=frameshifted;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154653.1;locus_tag=NDY24_21505;product=flagellar hook-associated protein FlgL;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4970726 4972600 . - . ID=gene-NDY24_21510;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=NDY24_21510 CP098602.1 Protein Homology CDS 4970726 4972600 . - 0 ID=cds-UUE98211.1;Parent=gene-NDY24_21510;Dbxref=NCBI_GP:UUE98211.1;Name=UUE98211.1;gbkey=CDS;gene=flgK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300294.1;locus_tag=NDY24_21510;product=flagellar hook-associated protein FlgK;protein_id=UUE98211.1;transl_table=11 CP098602.1 Genbank gene 4972612 4973802 . - . ID=gene-NDY24_21515;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=NDY24_21515 CP098602.1 Protein Homology CDS 4972612 4973802 . - 0 ID=cds-UUE98212.1;Parent=gene-NDY24_21515;Dbxref=NCBI_GP:UUE98212.1;Name=UUE98212.1;gbkey=CDS;gene=flgJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482966.1;locus_tag=NDY24_21515;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=UUE98212.1;transl_table=11 CP098602.1 Genbank gene 4973804 4974922 . - . ID=gene-NDY24_21520;Name=NDY24_21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21520 CP098602.1 Protein Homology CDS 4973804 4974922 . - 0 ID=cds-UUE98213.1;Parent=gene-NDY24_21520;Dbxref=NCBI_GP:UUE98213.1;Name=UUE98213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482965.1;locus_tag=NDY24_21520;product=flagellar basal body P-ring protein FlgI;protein_id=UUE98213.1;transl_table=11 CP098602.1 Genbank gene 4974933 4975625 . - . ID=gene-NDY24_21525;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=NDY24_21525 CP098602.1 Protein Homology CDS 4974933 4975625 . - 0 ID=cds-UUE98214.1;Parent=gene-NDY24_21525;Dbxref=NCBI_GP:UUE98214.1;Name=UUE98214.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901722.1;locus_tag=NDY24_21525;product=flagellar basal body L-ring protein FlgH;protein_id=UUE98214.1;transl_table=11 CP098602.1 Genbank pseudogene 4975667 4976395 . - . ID=gene-NDY24_21530;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=pseudogene;locus_tag=NDY24_21530;pseudo=true CP098602.1 Protein Homology CDS 4975667 4976395 . - 0 ID=cds-NDY24_21530;Parent=gene-NDY24_21530;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007080096.1;locus_tag=NDY24_21530;product=flagellar basal-body rod protein FlgG;pseudo=true;transl_table=11 CP098602.1 Genbank gene 4977278 4978033 . - . ID=gene-NDY24_21535;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;locus_tag=NDY24_21535 CP098602.1 Protein Homology CDS 4977278 4978033 . - 0 ID=cds-UUE98215.1;Parent=gene-NDY24_21535;Dbxref=NCBI_GP:UUE98215.1;Name=UUE98215.1;Ontology_term=GO:0001539,GO:0005198;gbkey=CDS;gene=flgF;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154648.1;locus_tag=NDY24_21535;product=flagellar basal-body rod protein FlgF;protein_id=UUE98215.1;transl_table=11 CP098602.1 Genbank gene 4978178 4979401 . - . ID=gene-NDY24_21540;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=NDY24_21540 CP098602.1 Protein Homology CDS 4978178 4979401 . - 0 ID=cds-UUE98216.1;Parent=gene-NDY24_21540;Dbxref=NCBI_GP:UUE98216.1;Name=UUE98216.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159265.1;locus_tag=NDY24_21540;product=flagellar hook protein FlgE;protein_id=UUE98216.1;transl_table=11 CP098602.1 Genbank gene 4979433 4980104 . - . ID=gene-NDY24_21545;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=NDY24_21545 CP098602.1 Protein Homology CDS 4979433 4980104 . - 0 ID=cds-UUE98217.1;Parent=gene-NDY24_21545;Dbxref=NCBI_GP:UUE98217.1;Name=UUE98217.1;Note=acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117421.1;locus_tag=NDY24_21545;product=flagellar hook assembly protein FlgD;protein_id=UUE98217.1;transl_table=11 CP098602.1 Genbank gene 4980143 4980550 . - . ID=gene-NDY24_21550;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=NDY24_21550 CP098602.1 Protein Homology CDS 4980143 4980550 . - 0 ID=cds-UUE98218.1;Parent=gene-NDY24_21550;Dbxref=NCBI_GP:UUE98218.1;Name=UUE98218.1;gbkey=CDS;gene=flgC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004425624.1;locus_tag=NDY24_21550;product=flagellar basal body rod protein FlgC;protein_id=UUE98218.1;transl_table=11 CP098602.1 Genbank gene 4980554 4980955 . - . ID=gene-NDY24_21555;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=NDY24_21555 CP098602.1 Protein Homology CDS 4980554 4980955 . - 0 ID=cds-UUE98219.1;Parent=gene-NDY24_21555;Dbxref=NCBI_GP:UUE98219.1;Name=UUE98219.1;Ontology_term=GO:0001539,GO:0005198,GO:0009429;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C proximal rod|0009429||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482950.1;locus_tag=NDY24_21555;product=flagellar basal body rod protein FlgB;protein_id=UUE98219.1;transl_table=11 CP098602.1 Genbank gene 4981291 4982235 . - . ID=gene-NDY24_21560;Name=NDY24_21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21560 CP098602.1 Protein Homology CDS 4981291 4982235 . - 0 ID=cds-UUE98220.1;Parent=gene-NDY24_21560;Dbxref=NCBI_GP:UUE98220.1;Name=UUE98220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002813451.1;locus_tag=NDY24_21560;product=chemotaxis protein;protein_id=UUE98220.1;transl_table=11 CP098602.1 Genbank gene 4982536 4983180 . + . ID=gene-NDY24_21565;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=NDY24_21565 CP098602.1 Protein Homology CDS 4982536 4983180 . + 0 ID=cds-UUE98221.1;Parent=gene-NDY24_21565;Dbxref=NCBI_GP:UUE98221.1;Name=UUE98221.1;gbkey=CDS;gene=flgA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373601.1;locus_tag=NDY24_21565;product=flagellar basal body P-ring formation protein FlgA;protein_id=UUE98221.1;transl_table=11 CP098602.1 Genbank gene 4983246 4983557 . + . ID=gene-NDY24_21570;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=NDY24_21570 CP098602.1 Protein Homology CDS 4983246 4983557 . + 0 ID=cds-UUE98222.1;Parent=gene-NDY24_21570;Dbxref=NCBI_GP:UUE98222.1;Name=UUE98222.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of transcription%2C DNA-templated|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503328.1;locus_tag=NDY24_21570;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=UUE98222.1;transl_table=11 CP098602.1 Genbank gene 4983573 4983905 . + . ID=gene-NDY24_21575;Name=NDY24_21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21575 CP098602.1 Protein Homology CDS 4983573 4983905 . + 0 ID=cds-UUE98223.1;Parent=gene-NDY24_21575;Dbxref=NCBI_GP:UUE98223.1;Name=UUE98223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450202.1;locus_tag=NDY24_21575;product=flagellar protein FlgN;protein_id=UUE98223.1;transl_table=11 CP098602.1 Genbank gene 4984059 4985285 . + . ID=gene-NDY24_21580;Name=NDY24_21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21580 CP098602.1 Protein Homology CDS 4984059 4985285 . + 0 ID=cds-UUE98224.1;Parent=gene-NDY24_21580;Dbxref=NCBI_GP:UUE98224.1;Name=UUE98224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304404.1;locus_tag=NDY24_21580;product=ATP-binding protein;protein_id=UUE98224.1;transl_table=11 CP098602.1 Genbank gene 4985424 4987145 . - . ID=gene-NDY24_21585;Name=NDY24_21585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21585 CP098602.1 Protein Homology CDS 4985424 4987145 . - 0 ID=cds-UUE98225.1;Parent=gene-NDY24_21585;Dbxref=NCBI_GP:UUE98225.1;Name=UUE98225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154643.1;locus_tag=NDY24_21585;product=EAL domain-containing protein;protein_id=UUE98225.1;transl_table=11 CP098602.1 Genbank gene 4987149 4989281 . - . ID=gene-NDY24_21590;Name=NDY24_21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21590 CP098602.1 Protein Homology CDS 4987149 4989281 . - 0 ID=cds-UUE98226.1;Parent=gene-NDY24_21590;Dbxref=NCBI_GP:UUE98226.1;Name=UUE98226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016848734.1;locus_tag=NDY24_21590;product=PAS domain S-box protein;protein_id=UUE98226.1;transl_table=11 CP098602.1 Genbank gene 4989401 4992187 . + . ID=gene-NDY24_21595;Name=NDY24_21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21595 CP098602.1 Protein Homology CDS 4989401 4992187 . + 0 ID=cds-UUE98227.1;Parent=gene-NDY24_21595;Dbxref=NCBI_GP:UUE98227.1;Name=UUE98227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347293.1;locus_tag=NDY24_21595;product=EAL domain-containing protein;protein_id=UUE98227.1;transl_table=11 CP098602.1 Genbank gene 4992276 4992352 . + . ID=gene-NDY24_21600;Name=NDY24_21600;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_21600 CP098602.1 cmsearch ncRNA 4992276 4992352 . + . ID=rna-NDY24_21600;Parent=gene-NDY24_21600;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_21600;product=sX9 sRNA CP098602.1 cmsearch exon 4992276 4992352 . + . ID=exon-NDY24_21600-1;Parent=rna-NDY24_21600;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_21600;product=sX9 sRNA CP098602.1 Genbank gene 4993312 4993596 . - . ID=gene-NDY24_21605;Name=NDY24_21605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21605 CP098602.1 Protein Homology CDS 4993312 4993596 . - 0 ID=cds-UUE98228.1;Parent=gene-NDY24_21605;Dbxref=NCBI_GP:UUE98228.1;Name=UUE98228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575786.1;locus_tag=NDY24_21605;product=hypothetical protein;protein_id=UUE98228.1;transl_table=11 CP098602.1 Genbank gene 4993681 4994958 . - . ID=gene-NDY24_21610;Name=NDY24_21610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21610 CP098602.1 Protein Homology CDS 4993681 4994958 . - 0 ID=cds-UUF00507.1;Parent=gene-NDY24_21610;Dbxref=NCBI_GP:UUF00507.1;Name=UUF00507.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159263.1;locus_tag=NDY24_21610;product=methyl-accepting chemotaxis protein;protein_id=UUF00507.1;transl_table=11 CP098602.1 Genbank gene 4995020 4995634 . - . ID=gene-NDY24_21615;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=NDY24_21615 CP098602.1 Protein Homology CDS 4995020 4995634 . - 0 ID=cds-UUE98229.1;Parent=gene-NDY24_21615;Dbxref=NCBI_GP:UUE98229.1;Name=UUE98229.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_029217215.1;locus_tag=NDY24_21615;product=high frequency lysogenization protein HflD;protein_id=UUE98229.1;transl_table=11 CP098602.1 Genbank gene 4995634 4996770 . - . ID=gene-NDY24_21620;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=NDY24_21620 CP098602.1 Protein Homology CDS 4995634 4996770 . - 0 ID=cds-UUE98230.1;Parent=gene-NDY24_21620;Dbxref=NCBI_GP:UUE98230.1;Name=UUE98230.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575784.1;locus_tag=NDY24_21620;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=UUE98230.1;transl_table=11 CP098602.1 Genbank gene 4996767 4997225 . - . ID=gene-NDY24_21625;Name=NDY24_21625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21625 CP098602.1 Protein Homology CDS 4996767 4997225 . - 0 ID=cds-UUE98231.1;Parent=gene-NDY24_21625;Dbxref=NCBI_GP:UUE98231.1;Name=UUE98231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259188.1;locus_tag=NDY24_21625;product=NUDIX hydrolase;protein_id=UUE98231.1;transl_table=11 CP098602.1 Genbank gene 4997488 4997808 . + . ID=gene-NDY24_21630;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=NDY24_21630 CP098602.1 Protein Homology CDS 4997488 4997808 . + 0 ID=cds-UUE98232.1;Parent=gene-NDY24_21630;Dbxref=NCBI_GP:UUE98232.1;Name=UUE98232.1;gbkey=CDS;gene=clpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448844.1;locus_tag=NDY24_21630;product=ATP-dependent Clp protease adapter ClpS;protein_id=UUE98232.1;transl_table=11 CP098602.1 Genbank gene 4997951 5000233 . + . ID=gene-NDY24_21635;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=NDY24_21635 CP098602.1 Protein Homology CDS 4997951 5000233 . + 0 ID=cds-UUE98233.1;Parent=gene-NDY24_21635;Dbxref=NCBI_GP:UUE98233.1;Name=UUE98233.1;Ontology_term=GO:0006508,GO:0043335,GO:0004176,GO:0009368;gbkey=CDS;gene=clpA;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA;go_process=proteolysis|0006508||IEA,protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901749.1;locus_tag=NDY24_21635;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=UUE98233.1;transl_table=11 CP098602.1 Genbank gene 5000376 5000594 . - . ID=gene-NDY24_21640;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=NDY24_21640 CP098602.1 Protein Homology CDS 5000376 5000594 . - 0 ID=cds-UUE98234.1;Parent=gene-NDY24_21640;Dbxref=NCBI_GP:UUE98234.1;Name=UUE98234.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002553999.1;locus_tag=NDY24_21640;product=translation initiation factor IF-1;protein_id=UUE98234.1;transl_table=11 CP098602.1 Genbank gene 5000675 5001403 . - . ID=gene-NDY24_21645;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=NDY24_21645 CP098602.1 Protein Homology CDS 5000675 5001403 . - 0 ID=cds-UUF00508.1;Parent=gene-NDY24_21645;Dbxref=NCBI_GP:UUF00508.1;Name=UUF00508.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyltransferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373570.1;locus_tag=NDY24_21645;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=UUF00508.1;transl_table=11 CP098602.1 Genbank gene 5001504 5002622 . - . ID=gene-NDY24_21650;Name=NDY24_21650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21650 CP098602.1 Protein Homology CDS 5001504 5002622 . - 0 ID=cds-UUE98235.1;Parent=gene-NDY24_21650;Dbxref=NCBI_GP:UUE98235.1;Name=UUE98235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116067.1;locus_tag=NDY24_21650;product=GNAT family N-acetyltransferase;protein_id=UUE98235.1;transl_table=11 CP098602.1 Genbank gene 5002680 5003648 . - . ID=gene-NDY24_21655;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=NDY24_21655 CP098602.1 Protein Homology CDS 5002680 5003648 . - 0 ID=cds-UUE98236.1;Parent=gene-NDY24_21655;Dbxref=NCBI_GP:UUE98236.1;Name=UUE98236.1;Ontology_term=GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964266.1;locus_tag=NDY24_21655;product=thioredoxin-disulfide reductase;protein_id=UUE98236.1;transl_table=11 CP098602.1 Genbank gene 5003931 5006288 . + . ID=gene-NDY24_21660;Name=NDY24_21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21660 CP098602.1 Protein Homology CDS 5003931 5006288 . + 0 ID=cds-UUE98237.1;Parent=gene-NDY24_21660;Dbxref=NCBI_GP:UUE98237.1;Name=UUE98237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172352.1;locus_tag=NDY24_21660;product=DNA translocase FtsK 4TM domain-containing protein;protein_id=UUE98237.1;transl_table=11 CP098602.1 Genbank gene 5006573 5008498 . + . ID=gene-NDY24_21665;Name=NDY24_21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21665 CP098602.1 Protein Homology CDS 5006573 5008498 . + 0 ID=cds-UUE98238.1;Parent=gene-NDY24_21665;Dbxref=NCBI_GP:UUE98238.1;Name=UUE98238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914468.1;locus_tag=NDY24_21665;product=DUF3857 and transglutaminase domain-containing protein;protein_id=UUE98238.1;transl_table=11 CP098602.1 Genbank gene 5008563 5009234 . + . ID=gene-NDY24_21670;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=NDY24_21670 CP098602.1 Protein Homology CDS 5008563 5009234 . + 0 ID=cds-UUE98239.1;Parent=gene-NDY24_21670;Dbxref=NCBI_GP:UUE98239.1;Name=UUE98239.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158314.1;locus_tag=NDY24_21670;product=outer membrane lipoprotein chaperone LolA;protein_id=UUE98239.1;transl_table=11 CP098602.1 Genbank gene 5009394 5010683 . + . ID=gene-NDY24_21675;Name=NDY24_21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21675 CP098602.1 Protein Homology CDS 5009394 5010683 . + 0 ID=cds-UUF00509.1;Parent=gene-NDY24_21675;Dbxref=NCBI_GP:UUF00509.1;Name=UUF00509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448737.1;locus_tag=NDY24_21675;product=replication-associated recombination protein A;protein_id=UUF00509.1;transl_table=11 CP098602.1 Genbank gene 5011000 5011401 . + . ID=gene-NDY24_21680;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=NDY24_21680 CP098602.1 Protein Homology CDS 5011000 5011401 . + 0 ID=cds-UUE98240.1;Parent=gene-NDY24_21680;Dbxref=NCBI_GP:UUE98240.1;Name=UUE98240.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448736.1;locus_tag=NDY24_21680;product=fluoride efflux transporter CrcB;protein_id=UUE98240.1;transl_table=11 CP098602.1 Genbank gene 5011500 5012705 . - . ID=gene-NDY24_21685;Name=NDY24_21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21685 CP098602.1 Protein Homology CDS 5011500 5012705 . - 0 ID=cds-UUE98241.1;Parent=gene-NDY24_21685;Dbxref=NCBI_GP:UUE98241.1;Name=UUE98241.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812978.1;locus_tag=NDY24_21685;product=acetyl-CoA C-acyltransferase;protein_id=UUE98241.1;transl_table=11 CP098602.1 Genbank gene 5012861 5015233 . - . ID=gene-NDY24_21690;Name=NDY24_21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21690 CP098602.1 Protein Homology CDS 5012861 5015233 . - 0 ID=cds-UUE98242.1;Parent=gene-NDY24_21690;Dbxref=NCBI_GP:UUE98242.1;Name=UUE98242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158309.1;locus_tag=NDY24_21690;product=3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein;protein_id=UUE98242.1;transl_table=11 CP098602.1 Genbank gene 5015259 5015891 . - . ID=gene-NDY24_21695;Name=NDY24_21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21695 CP098602.1 Protein Homology CDS 5015259 5015891 . - 0 ID=cds-UUE98243.1;Parent=gene-NDY24_21695;Dbxref=NCBI_GP:UUE98243.1;Name=UUE98243.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463154.1;locus_tag=NDY24_21695;product=TetR family transcriptional regulator;protein_id=UUE98243.1;transl_table=11 CP098602.1 Genbank gene 5016111 5016536 . + . ID=gene-NDY24_21700;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=NDY24_21700 CP098602.1 Protein Homology CDS 5016111 5016536 . + 0 ID=cds-UUE98244.1;Parent=gene-NDY24_21700;Dbxref=NCBI_GP:UUE98244.1;Name=UUE98244.1;Ontology_term=GO:0006165,GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;go_process=nucleoside diphosphate phosphorylation|0006165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005409295.1;locus_tag=NDY24_21700;product=nucleoside-diphosphate kinase;protein_id=UUE98244.1;transl_table=11 CP098602.1 Genbank gene 5016567 5017760 . + . ID=gene-NDY24_21705;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=NDY24_21705 CP098602.1 Protein Homology CDS 5016567 5017760 . + 0 ID=cds-UUE98245.1;Parent=gene-NDY24_21705;Dbxref=NCBI_GP:UUE98245.1;Name=UUE98245.1;Ontology_term=GO:0031167,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914477.1;locus_tag=NDY24_21705;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=UUE98245.1;transl_table=11 CP098602.1 Genbank gene 5017771 5018559 . + . ID=gene-NDY24_21710;Name=pilW;gbkey=Gene;gene=pilW;gene_biotype=protein_coding;locus_tag=NDY24_21710 CP098602.1 Protein Homology CDS 5017771 5018559 . + 0 ID=cds-UUF00510.1;Parent=gene-NDY24_21710;Dbxref=NCBI_GP:UUF00510.1;Name=UUF00510.1;Ontology_term=GO:0005515;gbkey=CDS;gene=pilW;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158306.1;locus_tag=NDY24_21710;product=type IV pilus biogenesis/stability protein PilW;protein_id=UUF00510.1;transl_table=11 CP098602.1 Genbank gene 5018556 5019416 . + . ID=gene-NDY24_21715;Name=NDY24_21715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21715 CP098602.1 Protein Homology CDS 5018556 5019416 . + 0 ID=cds-UUE98246.1;Parent=gene-NDY24_21715;Dbxref=NCBI_GP:UUE98246.1;Name=UUE98246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445040.1;locus_tag=NDY24_21715;product=DUF4115 domain-containing protein;protein_id=UUE98246.1;transl_table=11 CP098602.1 Genbank gene 5019487 5020125 . + . ID=gene-NDY24_21720;Name=NDY24_21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21720 CP098602.1 Protein Homology CDS 5019487 5020125 . + 0 ID=cds-UUE98247.1;Parent=gene-NDY24_21720;Dbxref=NCBI_GP:UUE98247.1;Name=UUE98247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503367.1;locus_tag=NDY24_21720;product=tetratricopeptide repeat protein;protein_id=UUE98247.1;transl_table=11 CP098602.1 Genbank gene 5020125 5021342 . + . ID=gene-NDY24_21725;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=NDY24_21725 CP098602.1 Protein Homology CDS 5020125 5021342 . + 0 ID=cds-UUE98248.1;Parent=gene-NDY24_21725;Dbxref=NCBI_GP:UUE98248.1;Name=UUE98248.1;Ontology_term=GO:0005515,GO:0009279;gbkey=CDS;gene=bamB;go_component=cell outer membrane|0009279||IEA;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007963809.1;locus_tag=NDY24_21725;product=outer membrane protein assembly factor BamB;protein_id=UUE98248.1;transl_table=11 CP098602.1 Genbank gene 5021353 5022750 . + . ID=gene-NDY24_21730;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=NDY24_21730 CP098602.1 Protein Homology CDS 5021353 5022750 . + 0 ID=cds-UUE98249.1;Parent=gene-NDY24_21730;Dbxref=NCBI_GP:UUE98249.1;Name=UUE98249.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904421.1;locus_tag=NDY24_21730;product=ribosome biogenesis GTPase Der;protein_id=UUE98249.1;transl_table=11 CP098602.1 Genbank gene 5022956 5024176 . + . ID=gene-NDY24_21735;Name=NDY24_21735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21735 CP098602.1 Protein Homology CDS 5022956 5024176 . + 0 ID=cds-UUE98250.1;Parent=gene-NDY24_21735;Dbxref=NCBI_GP:UUE98250.1;Name=UUE98250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160125.1;locus_tag=NDY24_21735;product=molybdopterin molybdotransferase MoeA;protein_id=UUE98250.1;transl_table=11 CP098602.1 Genbank gene 5024335 5025477 . - . ID=gene-NDY24_21740;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=NDY24_21740 CP098602.1 Protein Homology CDS 5024335 5025477 . - 0 ID=cds-UUE98251.1;Parent=gene-NDY24_21740;Dbxref=NCBI_GP:UUE98251.1;Name=UUE98251.1;gbkey=CDS;gene=moeB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482871.1;locus_tag=NDY24_21740;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=UUE98251.1;transl_table=11 CP098602.1 Genbank gene 5025581 5025796 . + . ID=gene-NDY24_21745;Name=NDY24_21745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21745 CP098602.1 Protein Homology CDS 5025581 5025796 . + 0 ID=cds-UUE98252.1;Parent=gene-NDY24_21745;Dbxref=NCBI_GP:UUE98252.1;Name=UUE98252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158298.1;locus_tag=NDY24_21745;product=hypothetical protein;protein_id=UUE98252.1;transl_table=11 CP098602.1 Genbank gene 5025991 5026971 . + . ID=gene-NDY24_21750;Name=xth;gbkey=Gene;gene=xth;gene_biotype=protein_coding;locus_tag=NDY24_21750 CP098602.1 Protein Homology CDS 5025991 5026971 . + 0 ID=cds-UUE98253.1;Parent=gene-NDY24_21750;Dbxref=NCBI_GP:UUE98253.1;Name=UUE98253.1;Ontology_term=GO:0006281,GO:0008853;gbkey=CDS;gene=xth;go_function=exodeoxyribonuclease III activity|0008853||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007970070.1;locus_tag=NDY24_21750;product=exodeoxyribonuclease III;protein_id=UUE98253.1;transl_table=11 CP098602.1 Genbank gene 5026964 5027239 . - . ID=gene-NDY24_21755;Name=NDY24_21755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21755 CP098602.1 Protein Homology CDS 5026964 5027239 . - 0 ID=cds-UUE98254.1;Parent=gene-NDY24_21755;Dbxref=NCBI_GP:UUE98254.1;Name=UUE98254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158292.1;locus_tag=NDY24_21755;product=hypothetical protein;protein_id=UUE98254.1;transl_table=11 CP098602.1 Genbank gene 5027444 5028697 . + . ID=gene-NDY24_21760;Name=NDY24_21760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21760 CP098602.1 Protein Homology CDS 5027444 5028697 . + 0 ID=cds-UUE98255.1;Parent=gene-NDY24_21760;Dbxref=NCBI_GP:UUE98255.1;Name=UUE98255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448718.1;locus_tag=NDY24_21760;product=molybdopterin molybdotransferase MoeA;protein_id=UUE98255.1;transl_table=11 CP098602.1 Genbank gene 5028744 5029313 . + . ID=gene-NDY24_21765;Name=NDY24_21765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21765 CP098602.1 Protein Homology CDS 5028744 5029313 . + 0 ID=cds-UUE98256.1;Parent=gene-NDY24_21765;Dbxref=NCBI_GP:UUE98256.1;Name=UUE98256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575382.1;locus_tag=NDY24_21765;product=molybdenum cofactor guanylyltransferase;protein_id=UUE98256.1;transl_table=11 CP098602.1 Genbank gene 5029267 5029659 . + . ID=gene-NDY24_21770;Name=NDY24_21770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21770 CP098602.1 Protein Homology CDS 5029267 5029659 . + 0 ID=cds-UUF00511.1;Parent=gene-NDY24_21770;Dbxref=NCBI_GP:UUF00511.1;Name=UUF00511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448716.1;locus_tag=NDY24_21770;product=hypothetical protein;protein_id=UUF00511.1;transl_table=11 CP098602.1 Genbank gene 5029688 5030686 . - . ID=gene-NDY24_21775;Name=NDY24_21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21775 CP098602.1 Protein Homology CDS 5029688 5030686 . - 0 ID=cds-UUE98257.1;Parent=gene-NDY24_21775;Dbxref=NCBI_GP:UUE98257.1;Name=UUE98257.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448715.1;locus_tag=NDY24_21775;product=SAM-dependent methyltransferase;protein_id=UUE98257.1;transl_table=11 CP098602.1 Genbank gene 5030769 5031341 . + . ID=gene-NDY24_21780;Name=NDY24_21780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21780 CP098602.1 Protein Homology CDS 5030769 5031341 . + 0 ID=cds-UUE98258.1;Parent=gene-NDY24_21780;Dbxref=NCBI_GP:UUE98258.1;Name=UUE98258.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575394.1;locus_tag=NDY24_21780;product=ANTAR domain-containing protein;protein_id=UUE98258.1;transl_table=11 CP098602.1 Genbank gene 5031346 5032410 . + . ID=gene-NDY24_21785;Name=NDY24_21785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21785 CP098602.1 Protein Homology CDS 5031346 5032410 . + 0 ID=cds-UUE98259.1;Parent=gene-NDY24_21785;Dbxref=NCBI_GP:UUE98259.1;Name=UUE98259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448713.1;locus_tag=NDY24_21785;product=ABC transporter substrate-binding protein;protein_id=UUE98259.1;transl_table=11 CP098602.1 Genbank gene 5033341 5034510 . + . ID=gene-NDY24_21790;Name=NDY24_21790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21790 CP098602.1 Protein Homology CDS 5033341 5034510 . + 0 ID=cds-UUF00512.1;Parent=gene-NDY24_21790;Dbxref=NCBI_GP:UUF00512.1;Name=UUF00512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158282.1;locus_tag=NDY24_21790;product=NarK/NasA family nitrate transporter;protein_id=UUF00512.1;transl_table=11 CP098602.1 Genbank gene 5034570 5036987 . + . ID=gene-NDY24_21795;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=NDY24_21795 CP098602.1 Protein Homology CDS 5034570 5036987 . + 0 ID=cds-UUF00513.1;Parent=gene-NDY24_21795;Dbxref=NCBI_GP:UUF00513.1;Name=UUF00513.1;Ontology_term=GO:0042128,GO:0008942,GO:0016491,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158281.1;locus_tag=NDY24_21795;product=nitrite reductase large subunit NirB;protein_id=UUF00513.1;transl_table=11 CP098602.1 Genbank gene 5036984 5037349 . + . ID=gene-NDY24_21800;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=NDY24_21800 CP098602.1 Protein Homology CDS 5036984 5037349 . + 0 ID=cds-UUE98260.1;Parent=gene-NDY24_21800;Dbxref=NCBI_GP:UUE98260.1;Name=UUE98260.1;Ontology_term=GO:0008942,GO:0051537;gbkey=CDS;gene=nirD;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237667.1;locus_tag=NDY24_21800;product=nitrite reductase small subunit NirD;protein_id=UUE98260.1;transl_table=11 CP098602.1 Genbank gene 5037346 5040144 . + . ID=gene-NDY24_21805;Name=NDY24_21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21805 CP098602.1 Protein Homology CDS 5037346 5040144 . + 0 ID=cds-UUE98261.1;Parent=gene-NDY24_21805;Dbxref=NCBI_GP:UUE98261.1;Name=UUE98261.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090169.1;locus_tag=NDY24_21805;product=molybdopterin-dependent oxidoreductase;protein_id=UUE98261.1;transl_table=11 CP098602.1 Genbank gene 5040214 5040960 . + . ID=gene-NDY24_21810;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=NDY24_21810 CP098602.1 Protein Homology CDS 5040214 5040960 . + 0 ID=cds-UUF00514.1;Parent=gene-NDY24_21810;Dbxref=NCBI_GP:UUF00514.1;Name=UUF00514.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159251.1;locus_tag=NDY24_21810;product=uroporphyrinogen-III C-methyltransferase;protein_id=UUF00514.1;transl_table=11 CP098602.1 Genbank gene 5041022 5042065 . - . ID=gene-NDY24_21815;Name=NDY24_21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21815 CP098602.1 Protein Homology CDS 5041022 5042065 . - 0 ID=cds-UUE98262.1;Parent=gene-NDY24_21815;Dbxref=NCBI_GP:UUE98262.1;Name=UUE98262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451328.1;locus_tag=NDY24_21815;product=acyltransferase;protein_id=UUE98262.1;transl_table=11 CP098602.1 Genbank gene 5042110 5043411 . - . ID=gene-NDY24_21820;Name=NDY24_21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21820 CP098602.1 Protein Homology CDS 5042110 5043411 . - 0 ID=cds-UUE98263.1;Parent=gene-NDY24_21820;Dbxref=NCBI_GP:UUE98263.1;Name=UUE98263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507756.1;locus_tag=NDY24_21820;product=NAD(P)-dependent oxidoreductase;protein_id=UUE98263.1;transl_table=11 CP098602.1 Genbank gene 5043408 5043989 . - . ID=gene-NDY24_21825;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=NDY24_21825 CP098602.1 Protein Homology CDS 5043408 5043989 . - 0 ID=cds-UUE98264.1;Parent=gene-NDY24_21825;Dbxref=NCBI_GP:UUE98264.1;Name=UUE98264.1;Ontology_term=GO:0009243,GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438396.1;locus_tag=NDY24_21825;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=UUE98264.1;transl_table=11 CP098602.1 Genbank gene 5043986 5045035 . - . ID=gene-NDY24_21830;Name=NDY24_21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21830 CP098602.1 Protein Homology CDS 5043986 5045035 . - 0 ID=cds-UUE98265.1;Parent=gene-NDY24_21830;Dbxref=NCBI_GP:UUE98265.1;Name=UUE98265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037177.1;locus_tag=NDY24_21830;product=SDR family oxidoreductase;protein_id=UUE98265.1;transl_table=11 CP098602.1 Genbank gene 5045040 5045813 . - . ID=gene-NDY24_21835;Name=rfbF;gbkey=Gene;gene=rfbF;gene_biotype=protein_coding;locus_tag=NDY24_21835 CP098602.1 Protein Homology CDS 5045040 5045813 . - 0 ID=cds-UUE98266.1;Parent=gene-NDY24_21835;Dbxref=NCBI_GP:UUE98266.1;Name=UUE98266.1;Ontology_term=GO:0009103,GO:0047343;gbkey=CDS;gene=rfbF;go_function=glucose-1-phosphate cytidylyltransferase activity|0047343||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000648783.1;locus_tag=NDY24_21835;product=glucose-1-phosphate cytidylyltransferase;protein_id=UUE98266.1;transl_table=11 CP098602.1 Genbank gene 5045870 5047054 . - . ID=gene-NDY24_21840;Name=NDY24_21840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21840 CP098602.1 Protein Homology CDS 5045870 5047054 . - 0 ID=cds-UUE98267.1;Parent=gene-NDY24_21840;Dbxref=NCBI_GP:UUE98267.1;Name=UUE98267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438398.1;locus_tag=NDY24_21840;product=glycosyltransferase;protein_id=UUE98267.1;transl_table=11 CP098602.1 Genbank gene 5047298 5047945 . + . ID=gene-NDY24_21845;Name=NDY24_21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21845 CP098602.1 Protein Homology CDS 5047298 5047945 . + 0 ID=cds-UUE98268.1;Parent=gene-NDY24_21845;Dbxref=NCBI_GP:UUE98268.1;Name=UUE98268.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF013434.2;locus_tag=NDY24_21845;product=FAD-dependent oxidoreductase;protein_id=UUE98268.1;transl_table=11 CP098602.1 Genbank gene 5048050 5049030 . - . ID=gene-NDY24_21850;Name=NDY24_21850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21850 CP098602.1 Protein Homology CDS 5048050 5049030 . - 0 ID=cds-UUE98269.1;Parent=gene-NDY24_21850;Dbxref=NCBI_GP:UUE98269.1;Name=UUE98269.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007975311.1;locus_tag=NDY24_21850;product=IS5 family transposase;protein_id=UUE98269.1;transl_table=11 CP098602.1 Genbank gene 5049058 5049636 . + . ID=gene-NDY24_21855;Name=NDY24_21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21855 CP098602.1 Protein Homology CDS 5049058 5049636 . + 0 ID=cds-UUE98270.1;Parent=gene-NDY24_21855;Dbxref=NCBI_GP:UUE98270.1;Name=UUE98270.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF013434.2;locus_tag=NDY24_21855;product=FAD-dependent oxidoreductase;protein_id=UUE98270.1;transl_table=11 CP098602.1 Genbank gene 5049786 5050043 . + . ID=gene-NDY24_21860;Name=NDY24_21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21860 CP098602.1 Protein Homology CDS 5049786 5050043 . + 0 ID=cds-UUE98271.1;Parent=gene-NDY24_21860;Dbxref=NCBI_GP:UUE98271.1;Name=UUE98271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812907.1;locus_tag=NDY24_21860;product=stress-induced protein;protein_id=UUE98271.1;transl_table=11 CP098602.1 Genbank gene 5050527 5051036 . + . ID=gene-NDY24_21865;Name=NDY24_21865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21865 CP098602.1 Protein Homology CDS 5050527 5051036 . + 0 ID=cds-UUE98272.1;Parent=gene-NDY24_21865;Dbxref=NCBI_GP:UUE98272.1;Name=UUE98272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373481.1;locus_tag=NDY24_21865;product=DUF892 family protein;protein_id=UUE98272.1;transl_table=11 CP098602.1 Genbank gene 5051211 5052131 . + . ID=gene-NDY24_21870;Name=NDY24_21870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21870 CP098602.1 Protein Homology CDS 5051211 5052131 . + 0 ID=cds-UUE98273.1;Parent=gene-NDY24_21870;Dbxref=NCBI_GP:UUE98273.1;Name=UUE98273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373479.1;locus_tag=NDY24_21870;product=M14 family metallocarboxypeptidase;protein_id=UUE98273.1;transl_table=11 CP098602.1 Genbank gene 5052179 5052769 . + . ID=gene-NDY24_21875;Name=NDY24_21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21875 CP098602.1 Protein Homology CDS 5052179 5052769 . + 0 ID=cds-UUE98274.1;Parent=gene-NDY24_21875;Dbxref=NCBI_GP:UUE98274.1;Name=UUE98274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051370.1;locus_tag=NDY24_21875;product=DUF1349 domain-containing protein;protein_id=UUE98274.1;transl_table=11 CP098602.1 Genbank gene 5052779 5054590 . - . ID=gene-NDY24_21880;Name=NDY24_21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21880 CP098602.1 Protein Homology CDS 5052779 5054590 . - 0 ID=cds-UUE98275.1;Parent=gene-NDY24_21880;Dbxref=NCBI_GP:UUE98275.1;Name=UUE98275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165052.1;locus_tag=NDY24_21880;product=EAL domain-containing protein;protein_id=UUE98275.1;transl_table=11 CP098602.1 Genbank gene 5055345 5066381 . + . ID=gene-NDY24_21885;Name=NDY24_21885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21885 CP098602.1 Protein Homology CDS 5055345 5066381 . + 0 ID=cds-UUE98276.1;Parent=gene-NDY24_21885;Dbxref=NCBI_GP:UUE98276.1;Name=UUE98276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507767.1;locus_tag=NDY24_21885;product=autotransporter-associated beta strand repeat-containing protein;protein_id=UUE98276.1;transl_table=11 CP098602.1 Genbank pseudogene 5066612 5069465 . - . ID=gene-NDY24_21890;Name=NDY24_21890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_21890;pseudo=true CP098602.1 Protein Homology CDS 5066612 5069465 . - 0 ID=cds-NDY24_21890;Parent=gene-NDY24_21890;Note=frameshifted;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160179.1;locus_tag=NDY24_21890;product=S8 family serine peptidase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 5070253 5070927 . - . ID=gene-NDY24_21895;Name=NDY24_21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21895 CP098602.1 GeneMarkS-2+ CDS 5070253 5070927 . - 0 ID=cds-UUE98277.1;Parent=gene-NDY24_21895;Dbxref=NCBI_GP:UUE98277.1;Name=UUE98277.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_21895;product=hypothetical protein;protein_id=UUE98277.1;transl_table=11 CP098602.1 Genbank gene 5071289 5072095 . - . ID=gene-NDY24_21900;Name=NDY24_21900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21900 CP098602.1 Protein Homology CDS 5071289 5072095 . - 0 ID=cds-UUF00515.1;Parent=gene-NDY24_21900;Dbxref=NCBI_GP:UUF00515.1;Name=UUF00515.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012722.2;locus_tag=NDY24_21900;product=HAMP domain-containing histidine kinase;protein_id=UUF00515.1;transl_table=11 CP098602.1 Genbank pseudogene 5072738 5073433 . - . ID=gene-NDY24_21905;Name=NDY24_21905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_21905;pseudo=true CP098602.1 Protein Homology CDS 5072738 5073433 . - 0 ID=cds-NDY24_21905;Parent=gene-NDY24_21905;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016944104.1;locus_tag=NDY24_21905;product=response regulator transcription factor;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 5073873 5074274 . - . ID=gene-NDY24_21910;Name=NDY24_21910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_21910;pseudo=true CP098602.1 Protein Homology CDS 5073873 5074274 . - 0 ID=cds-NDY24_21910;Parent=gene-NDY24_21910;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016974.2;locus_tag=NDY24_21910;product=aspartyl/asparaginyl beta-hydroxylase domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 5074579 5075385 . - . ID=gene-NDY24_21915;Name=NDY24_21915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21915 CP098602.1 Protein Homology CDS 5074579 5075385 . - 0 ID=cds-UUE98278.1;Parent=gene-NDY24_21915;Dbxref=NCBI_GP:UUE98278.1;Name=UUE98278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437816.1;locus_tag=NDY24_21915;product=MipA/OmpV family protein;protein_id=UUE98278.1;transl_table=11 CP098602.1 Genbank gene 5075691 5075852 . + . ID=gene-NDY24_21920;Name=NDY24_21920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21920 CP098602.1 Protein Homology CDS 5075691 5075852 . + 0 ID=cds-UUE98279.1;Parent=gene-NDY24_21920;Dbxref=NCBI_GP:UUE98279.1;Name=UUE98279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448798.1;locus_tag=NDY24_21920;product=hypothetical protein;protein_id=UUE98279.1;transl_table=11 CP098602.1 Genbank gene 5075992 5077509 . + . ID=gene-NDY24_21925;Name=NDY24_21925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21925 CP098602.1 Protein Homology CDS 5075992 5077509 . + 0 ID=cds-UUE98280.1;Parent=gene-NDY24_21925;Dbxref=NCBI_GP:UUE98280.1;Name=UUE98280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448797.1;locus_tag=NDY24_21925;product=FAD-dependent oxidoreductase;protein_id=UUE98280.1;transl_table=11 CP098602.1 Genbank gene 5077578 5078048 . - . ID=gene-NDY24_21930;Name=NDY24_21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21930 CP098602.1 Protein Homology CDS 5077578 5078048 . - 0 ID=cds-UUE98281.1;Parent=gene-NDY24_21930;Dbxref=NCBI_GP:UUE98281.1;Name=UUE98281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448796.1;locus_tag=NDY24_21930;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=UUE98281.1;transl_table=11 CP098602.1 Genbank gene 5078208 5078894 . - . ID=gene-NDY24_21935;Name=NDY24_21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21935 CP098602.1 Protein Homology CDS 5078208 5078894 . - 0 ID=cds-UUE98282.1;Parent=gene-NDY24_21935;Dbxref=NCBI_GP:UUE98282.1;Name=UUE98282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448795.1;locus_tag=NDY24_21935;product=glycosyltransferase;protein_id=UUE98282.1;transl_table=11 CP098602.1 Genbank gene 5078891 5079487 . - . ID=gene-NDY24_21940;Name=NDY24_21940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21940 CP098602.1 Protein Homology CDS 5078891 5079487 . - 0 ID=cds-UUE98283.1;Parent=gene-NDY24_21940;Dbxref=NCBI_GP:UUE98283.1;Name=UUE98283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158086.1;locus_tag=NDY24_21940;product=class I SAM-dependent methyltransferase;protein_id=UUE98283.1;transl_table=11 CP098602.1 Genbank gene 5079484 5080245 . - . ID=gene-NDY24_21945;Name=NDY24_21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21945 CP098602.1 Protein Homology CDS 5079484 5080245 . - 0 ID=cds-UUE98284.1;Parent=gene-NDY24_21945;Dbxref=NCBI_GP:UUE98284.1;Name=UUE98284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448793.1;locus_tag=NDY24_21945;product=PIG-L family deacetylase;protein_id=UUE98284.1;transl_table=11 CP098602.1 Genbank gene 5080233 5081228 . - . ID=gene-NDY24_21950;Name=NDY24_21950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21950 CP098602.1 Protein Homology CDS 5080233 5081228 . - 0 ID=cds-UUE98285.1;Parent=gene-NDY24_21950;Dbxref=NCBI_GP:UUE98285.1;Name=UUE98285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507429.1;locus_tag=NDY24_21950;product=acyl-CoA dehydrogenase family protein;protein_id=UUE98285.1;transl_table=11 CP098602.1 Genbank gene 5081338 5081706 . - . ID=gene-NDY24_21955;Name=NDY24_21955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21955 CP098602.1 Protein Homology CDS 5081338 5081706 . - 0 ID=cds-UUE98286.1;Parent=gene-NDY24_21955;Dbxref=NCBI_GP:UUE98286.1;Name=UUE98286.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448791.1;locus_tag=NDY24_21955;product=response regulator;protein_id=UUE98286.1;transl_table=11 CP098602.1 Genbank gene 5081781 5083049 . + . ID=gene-NDY24_21960;Name=NDY24_21960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21960 CP098602.1 Protein Homology CDS 5081781 5083049 . + 0 ID=cds-UUE98287.1;Parent=gene-NDY24_21960;Dbxref=NCBI_GP:UUE98287.1;Name=UUE98287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448790.1;locus_tag=NDY24_21960;product=PAS domain-containing protein;protein_id=UUE98287.1;transl_table=11 CP098602.1 Genbank gene 5083163 5083450 . - . ID=gene-NDY24_21965;Name=NDY24_21965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21965 CP098602.1 Protein Homology CDS 5083163 5083450 . - 0 ID=cds-UUE98288.1;Parent=gene-NDY24_21965;Dbxref=NCBI_GP:UUE98288.1;Name=UUE98288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904796.1;locus_tag=NDY24_21965;product=hypothetical protein;protein_id=UUE98288.1;transl_table=11 CP098602.1 Genbank gene 5083927 5084238 . + . ID=gene-NDY24_21970;Name=NDY24_21970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21970 CP098602.1 Protein Homology CDS 5083927 5084238 . + 0 ID=cds-UUE98289.1;Parent=gene-NDY24_21970;Dbxref=NCBI_GP:UUE98289.1;Name=UUE98289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438427.1;locus_tag=NDY24_21970;product=hypothetical protein;protein_id=UUE98289.1;transl_table=11 CP098602.1 Genbank gene 5084317 5084733 . + . ID=gene-NDY24_21975;Name=NDY24_21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21975 CP098602.1 Protein Homology CDS 5084317 5084733 . + 0 ID=cds-UUE98290.1;Parent=gene-NDY24_21975;Dbxref=NCBI_GP:UUE98290.1;Name=UUE98290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347345.1;locus_tag=NDY24_21975;product=hypothetical protein;protein_id=UUE98290.1;transl_table=11 CP098602.1 Genbank gene 5084730 5086085 . + . ID=gene-NDY24_21980;Name=NDY24_21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21980 CP098602.1 Protein Homology CDS 5084730 5086085 . + 0 ID=cds-UUE98291.1;Parent=gene-NDY24_21980;Dbxref=NCBI_GP:UUE98291.1;Name=UUE98291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448786.1;locus_tag=NDY24_21980;product=sorbosone dehydrogenase family protein;protein_id=UUE98291.1;transl_table=11 CP098602.1 Genbank gene 5086082 5087122 . - . ID=gene-NDY24_21985;Name=NDY24_21985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21985 CP098602.1 Protein Homology CDS 5086082 5087122 . - 0 ID=cds-UUE98292.1;Parent=gene-NDY24_21985;Dbxref=NCBI_GP:UUE98292.1;Name=UUE98292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448785.1;locus_tag=NDY24_21985;product=universal stress protein;protein_id=UUE98292.1;transl_table=11 CP098602.1 Genbank gene 5087098 5087802 . - . ID=gene-NDY24_21990;Name=NDY24_21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21990 CP098602.1 Protein Homology CDS 5087098 5087802 . - 0 ID=cds-UUE98293.1;Parent=gene-NDY24_21990;Dbxref=NCBI_GP:UUE98293.1;Name=UUE98293.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013246.2;locus_tag=NDY24_21990;product=hypothetical protein;protein_id=UUE98293.1;transl_table=11 CP098602.1 Genbank gene 5087799 5088044 . - . ID=gene-NDY24_21995;Name=NDY24_21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_21995 CP098602.1 Protein Homology CDS 5087799 5088044 . - 0 ID=cds-UUE98294.1;Parent=gene-NDY24_21995;Dbxref=NCBI_GP:UUE98294.1;Name=UUE98294.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013246.2;locus_tag=NDY24_21995;product=bestrophin family protein;protein_id=UUE98294.1;transl_table=11 CP098602.1 Genbank gene 5088245 5089684 . + . ID=gene-NDY24_22000;Name=NDY24_22000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22000 CP098602.1 Protein Homology CDS 5088245 5089684 . + 0 ID=cds-UUE98295.1;Parent=gene-NDY24_22000;Dbxref=NCBI_GP:UUE98295.1;Name=UUE98295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448783.1;locus_tag=NDY24_22000;product=PAS domain-containing sensor histidine kinase;protein_id=UUE98295.1;transl_table=11 CP098602.1 Genbank gene 5089677 5090321 . + . ID=gene-NDY24_22005;Name=NDY24_22005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22005 CP098602.1 Protein Homology CDS 5089677 5090321 . + 0 ID=cds-UUE98296.1;Parent=gene-NDY24_22005;Dbxref=NCBI_GP:UUE98296.1;Name=UUE98296.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=NDY24_22005;product=response regulator transcription factor;protein_id=UUE98296.1;transl_table=11 CP098602.1 Genbank gene 5090391 5091434 . + . ID=gene-NDY24_22010;Name=NDY24_22010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22010 CP098602.1 Protein Homology CDS 5090391 5091434 . + 0 ID=cds-UUE98297.1;Parent=gene-NDY24_22010;Dbxref=NCBI_GP:UUE98297.1;Name=UUE98297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448781.1;locus_tag=NDY24_22010;product=Gfo/Idh/MocA family oxidoreductase;protein_id=UUE98297.1;transl_table=11 CP098602.1 Genbank gene 5091453 5091704 . - . ID=gene-NDY24_22015;Name=NDY24_22015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22015 CP098602.1 Protein Homology CDS 5091453 5091704 . - 0 ID=cds-UUE98298.1;Parent=gene-NDY24_22015;Dbxref=NCBI_GP:UUE98298.1;Name=UUE98298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448780.1;locus_tag=NDY24_22015;product=hypothetical protein;protein_id=UUE98298.1;transl_table=11 CP098602.1 Genbank gene 5091701 5093056 . - . ID=gene-NDY24_22020;Name=NDY24_22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22020 CP098602.1 Protein Homology CDS 5091701 5093056 . - 0 ID=cds-UUE98299.1;Parent=gene-NDY24_22020;Dbxref=NCBI_GP:UUE98299.1;Name=UUE98299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009602102.1;locus_tag=NDY24_22020;product=TFIIB-type zinc ribbon-containing protein;protein_id=UUE98299.1;transl_table=11 CP098602.1 Genbank gene 5093075 5094226 . - . ID=gene-NDY24_22025;Name=NDY24_22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22025 CP098602.1 Protein Homology CDS 5093075 5094226 . - 0 ID=cds-UUE98300.1;Parent=gene-NDY24_22025;Dbxref=NCBI_GP:UUE98300.1;Name=UUE98300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012511156.1;locus_tag=NDY24_22025;product=SPFH domain-containing protein;protein_id=UUE98300.1;transl_table=11 CP098602.1 Genbank pseudogene 5094476 5094752 . - . ID=gene-NDY24_22030;Name=NDY24_22030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_22030;pseudo=true CP098602.1 Protein Homology CDS 5094476 5094752 . - 0 ID=cds-NDY24_22030;Parent=gene-NDY24_22030;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003474535.1;locus_tag=NDY24_22030;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 5094999 5097260 . - . ID=gene-NDY24_22035;Name=NDY24_22035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22035 CP098602.1 Protein Homology CDS 5094999 5097260 . - 0 ID=cds-UUE98301.1;Parent=gene-NDY24_22035;Dbxref=NCBI_GP:UUE98301.1;Name=UUE98301.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158529.1;locus_tag=NDY24_22035;product=methyl-accepting chemotaxis protein;protein_id=UUE98301.1;transl_table=11 CP098602.1 Genbank gene 5097541 5098410 . - . ID=gene-NDY24_22040;Name=NDY24_22040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22040 CP098602.1 Protein Homology CDS 5097541 5098410 . - 0 ID=cds-UUE98302.1;Parent=gene-NDY24_22040;Dbxref=NCBI_GP:UUE98302.1;Name=UUE98302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572908.1;locus_tag=NDY24_22040;product=NmrA/HSCARG family protein;protein_id=UUE98302.1;transl_table=11 CP098602.1 Genbank gene 5098553 5099428 . + . ID=gene-NDY24_22045;Name=NDY24_22045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22045 CP098602.1 Protein Homology CDS 5098553 5099428 . + 0 ID=cds-UUF00516.1;Parent=gene-NDY24_22045;Dbxref=NCBI_GP:UUF00516.1;Name=UUF00516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448774.1;locus_tag=NDY24_22045;product=LysR family transcriptional regulator;protein_id=UUF00516.1;transl_table=11 CP098602.1 Genbank pseudogene 5099697 5101053 . + . ID=gene-NDY24_22050;Name=NDY24_22050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_22050;pseudo=true CP098602.1 Protein Homology CDS 5099697 5101053 . + 0 ID=cds-NDY24_22050;Parent=gene-NDY24_22050;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448773.1;locus_tag=NDY24_22050;product=alpha/beta hydrolase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 5101050 5102099 . + . ID=gene-NDY24_22055;Name=NDY24_22055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_22055;pseudo=true CP098602.1 Protein Homology CDS 5101050 5102099 . + 0 ID=cds-NDY24_22055;Parent=gene-NDY24_22055;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904821.1;locus_tag=NDY24_22055;product=GMC family oxidoreductase;pseudo=true;transl_table=11 CP098602.1 Genbank pseudogene 5102348 5102590 . + . ID=gene-NDY24_22060;Name=NDY24_22060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_22060;pseudo=true CP098602.1 Protein Homology CDS 5102348 5102590 . + 0 ID=cds-NDY24_22060;Parent=gene-NDY24_22060;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611153.1;locus_tag=NDY24_22060;product=integrase core domain-containing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 5102772 5103317 . - . ID=gene-NDY24_22065;Name=NDY24_22065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22065 CP098602.1 GeneMarkS-2+ CDS 5102772 5103317 . - 0 ID=cds-UUE98303.1;Parent=gene-NDY24_22065;Dbxref=NCBI_GP:UUE98303.1;Name=UUE98303.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22065;product=hypothetical protein;protein_id=UUE98303.1;transl_table=11 CP098602.1 Genbank gene 5103647 5104525 . - . ID=gene-NDY24_22070;Name=NDY24_22070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22070 CP098602.1 GeneMarkS-2+ CDS 5103647 5104525 . - 0 ID=cds-UUF00527.1;Parent=gene-NDY24_22070;Dbxref=NCBI_GP:UUF00527.1;Name=UUF00527.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22070;product=hypothetical protein;protein_id=UUF00527.1;transl_table=11 CP098602.1 Genbank gene 5104922 5105977 . - . ID=gene-NDY24_22075;Name=NDY24_22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22075 CP098602.1 Protein Homology CDS 5104922 5105977 . - 0 ID=cds-UUE98304.1;Parent=gene-NDY24_22075;Dbxref=NCBI_GP:UUE98304.1;Name=UUE98304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158590.1;locus_tag=NDY24_22075;product=DNA-binding protein;protein_id=UUE98304.1;transl_table=11 CP098602.1 Genbank gene 5106248 5107828 . + . ID=gene-NDY24_22080;Name=NDY24_22080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22080 CP098602.1 Protein Homology CDS 5106248 5107828 . + 0 ID=cds-UUE98305.1;Parent=gene-NDY24_22080;Dbxref=NCBI_GP:UUE98305.1;Name=UUE98305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005996627.1;locus_tag=NDY24_22080;product=AAA family ATPase;protein_id=UUE98305.1;transl_table=11 CP098602.1 Genbank gene 5107806 5108249 . + . ID=gene-NDY24_22085;Name=NDY24_22085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22085 CP098602.1 GeneMarkS-2+ CDS 5107806 5108249 . + 0 ID=cds-UUE98306.1;Parent=gene-NDY24_22085;Dbxref=NCBI_GP:UUE98306.1;Name=UUE98306.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22085;product=hypothetical protein;protein_id=UUE98306.1;transl_table=11 CP098602.1 Genbank gene 5108242 5108904 . + . ID=gene-NDY24_22090;Name=NDY24_22090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22090 CP098602.1 Protein Homology CDS 5108242 5108904 . + 0 ID=cds-UUE98307.1;Parent=gene-NDY24_22090;Dbxref=NCBI_GP:UUE98307.1;Name=UUE98307.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013601.2;locus_tag=NDY24_22090;product=hypothetical protein;protein_id=UUE98307.1;transl_table=11 CP098602.1 Genbank gene 5109122 5109535 . + . ID=gene-NDY24_22095;Name=NDY24_22095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22095 CP098602.1 Protein Homology CDS 5109122 5109535 . + 0 ID=cds-UUE98308.1;Parent=gene-NDY24_22095;Dbxref=NCBI_GP:UUE98308.1;Name=UUE98308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019184740.1;locus_tag=NDY24_22095;product=helix-turn-helix domain-containing protein;protein_id=UUE98308.1;transl_table=11 CP098602.1 Genbank gene 5109532 5110806 . + . ID=gene-NDY24_22100;Name=NDY24_22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22100 CP098602.1 Protein Homology CDS 5109532 5110806 . + 0 ID=cds-UUE98309.1;Parent=gene-NDY24_22100;Dbxref=NCBI_GP:UUE98309.1;Name=UUE98309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005413373.1;locus_tag=NDY24_22100;product=site-specific integrase;protein_id=UUE98309.1;transl_table=11 CP098602.1 Genbank pseudogene 5110830 5113821 . + . ID=gene-NDY24_22105;Name=NDY24_22105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_22105;pseudo=true CP098602.1 Protein Homology CDS 5110830 5113821 . + 0 ID=cds-NDY24_22105;Parent=gene-NDY24_22105;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014159602.1;locus_tag=NDY24_22105;product=Tn3 family transposase;pseudo=true;transl_table=11 CP098602.1 Genbank gene 5113936 5114850 . + . ID=gene-NDY24_22110;Name=NDY24_22110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22110 CP098602.1 Protein Homology CDS 5113936 5114850 . + 0 ID=cds-UUE98310.1;Parent=gene-NDY24_22110;Dbxref=NCBI_GP:UUE98310.1;Name=UUE98310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010340394.1;locus_tag=NDY24_22110;product=DNA-binding protein;protein_id=UUE98310.1;transl_table=11 CP098602.1 Genbank gene 5115010 5115429 . - . ID=gene-NDY24_22115;Name=NDY24_22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22115 CP098602.1 Protein Homology CDS 5115010 5115429 . - 0 ID=cds-UUE98311.1;Parent=gene-NDY24_22115;Dbxref=NCBI_GP:UUE98311.1;Name=UUE98311.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023888.2;locus_tag=NDY24_22115;product=DUF3693 domain-containing protein;protein_id=UUE98311.1;transl_table=11 CP098602.1 Genbank gene 5115584 5115760 . + . ID=gene-NDY24_22120;Name=NDY24_22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22120 CP098602.1 GeneMarkS-2+ CDS 5115584 5115760 . + 0 ID=cds-UUE98312.1;Parent=gene-NDY24_22120;Dbxref=NCBI_GP:UUE98312.1;Name=UUE98312.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22120;product=hypothetical protein;protein_id=UUE98312.1;transl_table=11 CP098602.1 Genbank gene 5115972 5116172 . + . ID=gene-NDY24_22125;Name=NDY24_22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22125 CP098602.1 Protein Homology CDS 5115972 5116172 . + 0 ID=cds-UUE98313.1;Parent=gene-NDY24_22125;Dbxref=NCBI_GP:UUE98313.1;Name=UUE98313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115348.1;locus_tag=NDY24_22125;product=hypothetical protein;protein_id=UUE98313.1;transl_table=11 CP098602.1 Genbank gene 5116334 5116534 . + . ID=gene-NDY24_22130;Name=NDY24_22130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22130 CP098602.1 Protein Homology CDS 5116334 5116534 . + 0 ID=cds-UUE98314.1;Parent=gene-NDY24_22130;Dbxref=NCBI_GP:UUE98314.1;Name=UUE98314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347646.1;locus_tag=NDY24_22130;product=hypothetical protein;protein_id=UUE98314.1;transl_table=11 CP098602.1 Genbank pseudogene 5116626 5117565 . + . ID=gene-NDY24_22135;Name=NDY24_22135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_22135;pseudo=true CP098602.1 Protein Homology CDS 5116626 5117565 . + 0 ID=cds-NDY24_22135;Parent=gene-NDY24_22135;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174207.1;locus_tag=NDY24_22135;product=replication initiation protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 5117562 5117858 . + . ID=gene-NDY24_22140;Name=NDY24_22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22140 CP098602.1 Protein Homology CDS 5117562 5117858 . + 0 ID=cds-UUE98315.1;Parent=gene-NDY24_22140;Dbxref=NCBI_GP:UUE98315.1;Name=UUE98315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171365.1;locus_tag=NDY24_22140;product=G5P family DNA-binding protein;protein_id=UUE98315.1;transl_table=11 CP098602.1 Genbank gene 5117862 5118083 . + . ID=gene-NDY24_22145;Name=NDY24_22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22145 CP098602.1 GeneMarkS-2+ CDS 5117862 5118083 . + 0 ID=cds-UUE98316.1;Parent=gene-NDY24_22145;Dbxref=NCBI_GP:UUE98316.1;Name=UUE98316.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22145;product=hypothetical protein;protein_id=UUE98316.1;transl_table=11 CP098602.1 Genbank gene 5118101 5118397 . + . ID=gene-NDY24_22150;Name=NDY24_22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22150 CP098602.1 GeneMarkS-2+ CDS 5118101 5118397 . + 0 ID=cds-UUE98317.1;Parent=gene-NDY24_22150;Dbxref=NCBI_GP:UUE98317.1;Name=UUE98317.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22150;product=hypothetical protein;protein_id=UUE98317.1;transl_table=11 CP098602.1 Genbank pseudogene 5118473 5119995 . + . ID=gene-NDY24_22155;Name=NDY24_22155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_22155;pseudo=true CP098602.1 Protein Homology CDS 5118473 5119995 . + 0 ID=cds-NDY24_22155;Parent=gene-NDY24_22155;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408496.1;locus_tag=NDY24_22155;product=hypothetical protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 5119938 5120258 . + . ID=gene-NDY24_22160;Name=NDY24_22160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22160 CP098602.1 Protein Homology CDS 5119938 5120258 . + 0 ID=cds-UUE98318.1;Parent=gene-NDY24_22160;Dbxref=NCBI_GP:UUE98318.1;Name=UUE98318.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022194.2;locus_tag=NDY24_22160;product=DUF2523 domain-containing protein;protein_id=UUE98318.1;transl_table=11 CP098602.1 Genbank gene 5120255 5120782 . + . ID=gene-NDY24_22165;Name=NDY24_22165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22165 CP098602.1 Protein Homology CDS 5120255 5120782 . + 0 ID=cds-UUE98319.1;Parent=gene-NDY24_22165;Dbxref=NCBI_GP:UUE98319.1;Name=UUE98319.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017518.2;locus_tag=NDY24_22165;product=zonular occludens toxin domain-containing protein;protein_id=UUE98319.1;transl_table=11 CP098602.1 Genbank gene 5120755 5121078 . + . ID=gene-NDY24_22170;Name=NDY24_22170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22170 CP098602.1 GeneMarkS-2+ CDS 5120755 5121078 . + 0 ID=cds-UUE98320.1;Parent=gene-NDY24_22170;Dbxref=NCBI_GP:UUE98320.1;Name=UUE98320.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22170;product=hypothetical protein;protein_id=UUE98320.1;transl_table=11 CP098602.1 Genbank gene 5121481 5122116 . + . ID=gene-NDY24_22175;Name=NDY24_22175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22175 CP098602.1 Protein Homology CDS 5121481 5122116 . + 0 ID=cds-UUF00517.1;Parent=gene-NDY24_22175;Dbxref=NCBI_GP:UUF00517.1;Name=UUF00517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015979243.1;locus_tag=NDY24_22175;product=TraX family protein;protein_id=UUF00517.1;transl_table=11 CP098602.1 Genbank gene 5122617 5122970 . - . ID=gene-NDY24_22180;Name=NDY24_22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22180 CP098602.1 GeneMarkS-2+ CDS 5122617 5122970 . - 0 ID=cds-UUE98321.1;Parent=gene-NDY24_22180;Dbxref=NCBI_GP:UUE98321.1;Name=UUE98321.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22180;product=hypothetical protein;protein_id=UUE98321.1;transl_table=11 CP098602.1 Genbank pseudogene 5123163 5123544 . + . ID=gene-NDY24_22185;Name=NDY24_22185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_22185;pseudo=true CP098602.1 Protein Homology CDS 5123163 5123544 . + 0 ID=cds-NDY24_22185;Parent=gene-NDY24_22185;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037229.1;locus_tag=NDY24_22185;product=phage protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 5123581 5123772 . - . ID=gene-NDY24_22190;Name=NDY24_22190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22190 CP098602.1 Protein Homology CDS 5123581 5123772 . - 0 ID=cds-UUE98322.1;Parent=gene-NDY24_22190;Dbxref=NCBI_GP:UUE98322.1;Name=UUE98322.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017655.2;locus_tag=NDY24_22190;product=TraX family protein;protein_id=UUE98322.1;transl_table=11 CP098602.1 Genbank gene 5123795 5124256 . - . ID=gene-NDY24_22195;Name=NDY24_22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22195 CP098602.1 Protein Homology CDS 5123795 5124256 . - 0 ID=cds-UUE98323.1;Parent=gene-NDY24_22195;Dbxref=NCBI_GP:UUE98323.1;Name=UUE98323.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF010454.0;locus_tag=NDY24_22195;product=TraX family protein;protein_id=UUE98323.1;transl_table=11 CP098602.1 Genbank gene 5124253 5124936 . - . ID=gene-NDY24_22200;Name=NDY24_22200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22200 CP098602.1 GeneMarkS-2+ CDS 5124253 5124936 . - 0 ID=cds-UUE98324.1;Parent=gene-NDY24_22200;Dbxref=NCBI_GP:UUE98324.1;Name=UUE98324.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22200;product=hypothetical protein;protein_id=UUE98324.1;transl_table=11 CP098602.1 Genbank gene 5124909 5125436 . - . ID=gene-NDY24_22205;Name=NDY24_22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22205 CP098602.1 Protein Homology CDS 5124909 5125436 . - 0 ID=cds-UUE98325.1;Parent=gene-NDY24_22205;Dbxref=NCBI_GP:UUE98325.1;Name=UUE98325.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017518.2;locus_tag=NDY24_22205;product=zonular occludens toxin domain-containing protein;protein_id=UUE98325.1;transl_table=11 CP098602.1 Genbank gene 5125455 5125736 . - . ID=gene-NDY24_22210;Name=NDY24_22210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22210 CP098602.1 GeneMarkS-2+ CDS 5125455 5125736 . - 0 ID=cds-UUE98326.1;Parent=gene-NDY24_22210;Dbxref=NCBI_GP:UUE98326.1;Name=UUE98326.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22210;product=hypothetical protein;protein_id=UUE98326.1;transl_table=11 CP098602.1 Genbank gene 5125781 5126257 . - . ID=gene-NDY24_22215;Name=NDY24_22215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22215 CP098602.1 GeneMarkS-2+ CDS 5125781 5126257 . - 0 ID=cds-UUE98327.1;Parent=gene-NDY24_22215;Dbxref=NCBI_GP:UUE98327.1;Name=UUE98327.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22215;product=hypothetical protein;protein_id=UUE98327.1;transl_table=11 CP098602.1 Genbank gene 5127347 5127685 . - . ID=gene-NDY24_22220;Name=NDY24_22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22220 CP098602.1 GeneMarkS-2+ CDS 5127347 5127685 . - 0 ID=cds-UUE98328.1;Parent=gene-NDY24_22220;Dbxref=NCBI_GP:UUE98328.1;Name=UUE98328.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22220;product=hypothetical protein;protein_id=UUE98328.1;transl_table=11 CP098602.1 Genbank gene 5127823 5128023 . - . ID=gene-NDY24_22225;Name=NDY24_22225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22225 CP098602.1 Protein Homology CDS 5127823 5128023 . - 0 ID=cds-UUE98329.1;Parent=gene-NDY24_22225;Dbxref=NCBI_GP:UUE98329.1;Name=UUE98329.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014369.2;locus_tag=NDY24_22225;product=G5P family DNA-binding protein;protein_id=UUE98329.1;transl_table=11 CP098602.1 Genbank pseudogene 5128117 5129061 . - . ID=gene-NDY24_22230;Name=NDY24_22230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_22230;pseudo=true CP098602.1 Protein Homology CDS 5128117 5129061 . - 0 ID=cds-NDY24_22230;Parent=gene-NDY24_22230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154894.1;locus_tag=NDY24_22230;product=inovirus-type Gp2 protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 5129175 5129480 . + . ID=gene-NDY24_22235;Name=NDY24_22235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22235 CP098602.1 GeneMarkS-2+ CDS 5129175 5129480 . + 0 ID=cds-UUE98330.1;Parent=gene-NDY24_22235;Dbxref=NCBI_GP:UUE98330.1;Name=UUE98330.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22235;product=hypothetical protein;protein_id=UUE98330.1;transl_table=11 CP098602.1 Genbank gene 5129528 5129746 . - . ID=gene-NDY24_22240;Name=NDY24_22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22240 CP098602.1 GeneMarkS-2+ CDS 5129528 5129746 . - 0 ID=cds-UUE98331.1;Parent=gene-NDY24_22240;Dbxref=NCBI_GP:UUE98331.1;Name=UUE98331.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22240;product=hypothetical protein;protein_id=UUE98331.1;transl_table=11 CP098602.1 Genbank gene 5130012 5130344 . + . ID=gene-NDY24_22245;Name=NDY24_22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22245 CP098602.1 Protein Homology CDS 5130012 5130344 . + 0 ID=cds-UUE98332.1;Parent=gene-NDY24_22245;Dbxref=NCBI_GP:UUE98332.1;Name=UUE98332.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023888.2;locus_tag=NDY24_22245;product=DUF3693 domain-containing protein;protein_id=UUE98332.1;transl_table=11 CP098602.1 Genbank gene 5130856 5131188 . - . ID=gene-NDY24_22250;Name=NDY24_22250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22250 CP098602.1 Protein Homology CDS 5130856 5131188 . - 0 ID=cds-UUE98333.1;Parent=gene-NDY24_22250;Dbxref=NCBI_GP:UUE98333.1;Name=UUE98333.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF017355.2;locus_tag=NDY24_22250;product=SEC-C metal-binding domain-containing protein;protein_id=UUE98333.1;transl_table=11 CP098602.1 Genbank pseudogene 5131780 5133583 . - . ID=gene-NDY24_22255;Name=NDY24_22255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_22255;pseudo=true CP098602.1 Protein Homology CDS 5131780 5133583 . - 0 ID=cds-NDY24_22255;Parent=gene-NDY24_22255;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450395.1;locus_tag=NDY24_22255;product=transmembrane repetitive protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 5133597 5134196 . - . ID=gene-NDY24_22260;Name=NDY24_22260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22260 CP098602.1 Protein Homology CDS 5133597 5134196 . - 0 ID=cds-UUE98334.1;Parent=gene-NDY24_22260;Dbxref=NCBI_GP:UUE98334.1;Name=UUE98334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005410314.1;locus_tag=NDY24_22260;product=NfuA family Fe-S biogenesis protein;protein_id=UUE98334.1;transl_table=11 CP098602.1 Genbank gene 5134285 5134641 . + . ID=gene-NDY24_22265;Name=NDY24_22265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22265 CP098602.1 Protein Homology CDS 5134285 5134641 . + 0 ID=cds-UUE98335.1;Parent=gene-NDY24_22265;Dbxref=NCBI_GP:UUE98335.1;Name=UUE98335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090260.1;locus_tag=NDY24_22265;product=4a-hydroxytetrahydrobiopterin dehydratase;protein_id=UUE98335.1;transl_table=11 CP098602.1 Genbank gene 5134638 5135060 . + . ID=gene-NDY24_22270;Name=NDY24_22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22270 CP098602.1 Protein Homology CDS 5134638 5135060 . + 0 ID=cds-UUE98336.1;Parent=gene-NDY24_22270;Dbxref=NCBI_GP:UUE98336.1;Name=UUE98336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269750.1;locus_tag=NDY24_22270;product=energy transducer TonB;protein_id=UUE98336.1;transl_table=11 CP098602.1 Genbank pseudogene 5135321 5136140 . + . ID=gene-NDY24_22275;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=pseudogene;locus_tag=NDY24_22275;pseudo=true CP098602.1 Protein Homology CDS 5135321 5136140 . + 0 ID=cds-NDY24_22275;Parent=gene-NDY24_22275;Note=frameshifted;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575667.1;locus_tag=NDY24_22275;product=zinc transporter ZupT;pseudo=true;transl_table=11 CP098602.1 Genbank gene 5136168 5137154 . - . ID=gene-NDY24_22280;Name=NDY24_22280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22280 CP098602.1 Protein Homology CDS 5136168 5137154 . - 0 ID=cds-UUE98337.1;Parent=gene-NDY24_22280;Dbxref=NCBI_GP:UUE98337.1;Name=UUE98337.1;Ontology_term=GO:0001522,GO:0009451,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303869.1;locus_tag=NDY24_22280;product=RluA family pseudouridine synthase;protein_id=UUE98337.1;transl_table=11 CP098602.1 Genbank pseudogene 5137557 5141293 . + . ID=gene-NDY24_22285;Name=NDY24_22285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_22285;pseudo=true CP098602.1 Protein Homology CDS 5137557 5141293 . + 0 ID=cds-NDY24_22285;Parent=gene-NDY24_22285;Note=frameshifted;Ontology_term=GO:0006401,GO:0004540;gbkey=CDS;go_function=ribonuclease activity|0004540||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015471921.1;locus_tag=NDY24_22285;product=Rne/Rng family ribonuclease;pseudo=true;transl_table=11 CP098602.1 Genbank gene 5141648 5142295 . - . ID=gene-NDY24_22290;Name=NDY24_22290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22290 CP098602.1 Protein Homology CDS 5141648 5142295 . - 0 ID=cds-UUE98338.1;Parent=gene-NDY24_22290;Dbxref=NCBI_GP:UUE98338.1;Name=UUE98338.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408972.1;locus_tag=NDY24_22290;product=response regulator;protein_id=UUE98338.1;transl_table=11 CP098602.1 Genbank gene 5142505 5143266 . - . ID=gene-NDY24_22295;Name=NDY24_22295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22295 CP098602.1 Protein Homology CDS 5142505 5143266 . - 0 ID=cds-UUE98339.1;Parent=gene-NDY24_22295;Dbxref=NCBI_GP:UUE98339.1;Name=UUE98339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373348.1;locus_tag=NDY24_22295;product=sulfurtransferase;protein_id=UUE98339.1;transl_table=11 CP098602.1 Genbank gene 5143302 5143667 . - . ID=gene-NDY24_22300;Name=NDY24_22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22300 CP098602.1 Protein Homology CDS 5143302 5143667 . - 0 ID=cds-UUE98340.1;Parent=gene-NDY24_22300;Dbxref=NCBI_GP:UUE98340.1;Name=UUE98340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301518.1;locus_tag=NDY24_22300;product=DUF6164 family protein;protein_id=UUE98340.1;transl_table=11 CP098602.1 Genbank gene 5143716 5144138 . + . ID=gene-NDY24_22305;Name=NDY24_22305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22305 CP098602.1 Protein Homology CDS 5143716 5144138 . + 0 ID=cds-UUE98341.1;Parent=gene-NDY24_22305;Dbxref=NCBI_GP:UUE98341.1;Name=UUE98341.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575659.1;locus_tag=NDY24_22305;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=UUE98341.1;transl_table=11 CP098602.1 Genbank gene 5144331 5144435 . + . ID=gene-NDY24_22310;Name=NDY24_22310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22310 CP098602.1 Protein Homology CDS 5144331 5144435 . + 0 ID=cds-UUF00518.1;Parent=gene-NDY24_22310;Dbxref=NCBI_GP:UUF00518.1;Name=UUF00518.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015451.2;locus_tag=NDY24_22310;product=hypothetical protein;protein_id=UUF00518.1;transl_table=11 CP098602.1 Genbank gene 5144614 5145444 . + . ID=gene-NDY24_22315;Name=NDY24_22315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22315 CP098602.1 Protein Homology CDS 5144614 5145444 . + 0 ID=cds-UUE98342.1;Parent=gene-NDY24_22315;Dbxref=NCBI_GP:UUE98342.1;Name=UUE98342.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03862.1;locus_tag=NDY24_22315;product=TIGR03862 family flavoprotein;protein_id=UUE98342.1;transl_table=11 CP098602.1 Genbank gene 5145428 5146720 . - . ID=gene-NDY24_22320;Name=NDY24_22320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22320 CP098602.1 Protein Homology CDS 5145428 5146720 . - 0 ID=cds-UUE98343.1;Parent=gene-NDY24_22320;Dbxref=NCBI_GP:UUE98343.1;Name=UUE98343.1;Ontology_term=GO:0000271,GO:0003979,GO:0016616,GO:0051287;gbkey=CDS;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503478.1;locus_tag=NDY24_22320;product=nucleotide sugar dehydrogenase;protein_id=UUE98343.1;transl_table=11 CP098602.1 Genbank gene 5146865 5146947 . + . ID=gene-NDY24_22325;Name=NDY24_22325;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_22325 CP098602.1 tRNAscan-SE tRNA 5146865 5146947 . + . ID=rna-NDY24_22325;Parent=gene-NDY24_22325;anticodon=(pos:5146898..5146900);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_22325;product=tRNA-Leu CP098602.1 tRNAscan-SE exon 5146865 5146947 . + . ID=exon-NDY24_22325-1;Parent=rna-NDY24_22325;anticodon=(pos:5146898..5146900);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_22325;product=tRNA-Leu CP098602.1 Genbank gene 5147057 5147215 . + . ID=gene-NDY24_22330;Name=NDY24_22330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22330 CP098602.1 GeneMarkS-2+ CDS 5147057 5147215 . + 0 ID=cds-UUE98344.1;Parent=gene-NDY24_22330;Dbxref=NCBI_GP:UUE98344.1;Name=UUE98344.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22330;product=hypothetical protein;protein_id=UUE98344.1;transl_table=11 CP098602.1 Genbank gene 5147218 5147880 . + . ID=gene-NDY24_22335;Name=NDY24_22335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22335 CP098602.1 Protein Homology CDS 5147218 5147880 . + 0 ID=cds-UUE98345.1;Parent=gene-NDY24_22335;Dbxref=NCBI_GP:UUE98345.1;Name=UUE98345.1;Ontology_term=GO:0000287,GO:0008897;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408977.1;locus_tag=NDY24_22335;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=UUE98345.1;transl_table=11 CP098602.1 Genbank gene 5148010 5148082 . - . ID=gene-NDY24_22340;Name=NDY24_22340;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_22340 CP098602.1 tRNAscan-SE tRNA 5148010 5148082 . - . ID=rna-NDY24_22340;Parent=gene-NDY24_22340;anticodon=(pos:complement(5148047..5148049));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_22340;product=tRNA-Gly CP098602.1 tRNAscan-SE exon 5148010 5148082 . - . ID=exon-NDY24_22340-1;Parent=rna-NDY24_22340;anticodon=(pos:complement(5148047..5148049));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_22340;product=tRNA-Gly CP098602.1 Genbank gene 5148211 5148284 . - . ID=gene-NDY24_22345;Name=NDY24_22345;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_22345 CP098602.1 tRNAscan-SE tRNA 5148211 5148284 . - . ID=rna-NDY24_22345;Parent=gene-NDY24_22345;anticodon=(pos:complement(5148250..5148252));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_22345;product=tRNA-Cys CP098602.1 tRNAscan-SE exon 5148211 5148284 . - . ID=exon-NDY24_22345-1;Parent=rna-NDY24_22345;anticodon=(pos:complement(5148250..5148252));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_22345;product=tRNA-Cys CP098602.1 Genbank gene 5149847 5154556 . + . ID=gene-NDY24_22350;Name=NDY24_22350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22350 CP098602.1 Protein Homology CDS 5149847 5154556 . + 0 ID=cds-UUE98346.1;Parent=gene-NDY24_22350;Dbxref=NCBI_GP:UUE98346.1;Name=UUE98346.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01733.1;locus_tag=NDY24_22350;product=amino acid adenylation domain-containing protein;protein_id=UUE98346.1;transl_table=11 CP098602.1 Genbank gene 5154612 5157236 . + . ID=gene-NDY24_22355;Name=NDY24_22355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22355 CP098602.1 Protein Homology CDS 5154612 5157236 . + 0 ID=cds-UUE98347.1;Parent=gene-NDY24_22355;Dbxref=NCBI_GP:UUE98347.1;Name=UUE98347.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012873.2;locus_tag=NDY24_22355;product=AMP-binding protein;protein_id=UUE98347.1;transl_table=11 CP098602.1 Genbank gene 5157960 5158388 . + . ID=gene-NDY24_22360;Name=NDY24_22360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22360 CP098602.1 Protein Homology CDS 5157960 5158388 . + 0 ID=cds-UUE98348.1;Parent=gene-NDY24_22360;Dbxref=NCBI_GP:UUE98348.1;Name=UUE98348.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012759.2;locus_tag=NDY24_22360;product=phosphopantetheine-binding protein;protein_id=UUE98348.1;transl_table=11 CP098602.1 Genbank gene 5158375 5165094 . + . ID=gene-NDY24_22365;Name=NDY24_22365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22365 CP098602.1 Protein Homology CDS 5158375 5165094 . + 0 ID=cds-UUE98349.1;Parent=gene-NDY24_22365;Dbxref=NCBI_GP:UUE98349.1;Name=UUE98349.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012873.2;locus_tag=NDY24_22365;product=amino acid adenylation domain-containing protein;protein_id=UUE98349.1;transl_table=11 CP098602.1 Genbank gene 5164982 5165317 . + . ID=gene-NDY24_22370;Name=NDY24_22370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22370 CP098602.1 Protein Homology CDS 5164982 5165317 . + 0 ID=cds-UUE98350.1;Parent=gene-NDY24_22370;Dbxref=NCBI_GP:UUE98350.1;Name=UUE98350.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012873.2;locus_tag=NDY24_22370;product=condensation domain-containing protein;protein_id=UUE98350.1;transl_table=11 CP098602.1 Genbank gene 5165292 5165618 . + . ID=gene-NDY24_22375;Name=NDY24_22375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22375 CP098602.1 Protein Homology CDS 5165292 5165618 . + 0 ID=cds-UUE98351.1;Parent=gene-NDY24_22375;Dbxref=NCBI_GP:UUE98351.1;Name=UUE98351.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012873.2;locus_tag=NDY24_22375;product=condensation domain-containing protein;protein_id=UUE98351.1;transl_table=11 CP098602.1 Genbank gene 5166000 5166233 . + . ID=gene-NDY24_22380;Name=NDY24_22380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22380 CP098602.1 GeneMarkS-2+ CDS 5166000 5166233 . + 0 ID=cds-UUE98352.1;Parent=gene-NDY24_22380;Dbxref=NCBI_GP:UUE98352.1;Name=UUE98352.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22380;product=hypothetical protein;protein_id=UUE98352.1;transl_table=11 CP098602.1 Genbank pseudogene 5166346 5166821 . + . ID=gene-NDY24_22385;Name=NDY24_22385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_22385;pseudo=true CP098602.1 Protein Homology CDS 5166346 5166821 . + 0 ID=cds-NDY24_22385;Parent=gene-NDY24_22385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.2;locus_tag=NDY24_22385;product=AMP-binding protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 5166878 5170264 . + . ID=gene-NDY24_22390;Name=NDY24_22390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22390 CP098602.1 Protein Homology CDS 5166878 5170264 . + 0 ID=cds-UUE98353.1;Parent=gene-NDY24_22390;Dbxref=NCBI_GP:UUE98353.1;Name=UUE98353.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012873.2;locus_tag=NDY24_22390;product=condensation domain-containing protein;protein_id=UUE98353.1;transl_table=11 CP098602.1 Genbank gene 5170228 5174877 . + . ID=gene-NDY24_22395;Name=NDY24_22395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22395 CP098602.1 Protein Homology CDS 5170228 5174877 . + 0 ID=cds-UUE98354.1;Parent=gene-NDY24_22395;Dbxref=NCBI_GP:UUE98354.1;Name=UUE98354.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012873.2;locus_tag=NDY24_22395;product=amino acid adenylation domain-containing protein;protein_id=UUE98354.1;transl_table=11 CP098602.1 Genbank gene 5174874 5175383 . + . ID=gene-NDY24_22400;Name=NDY24_22400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22400 CP098602.1 Protein Homology CDS 5174874 5175383 . + 0 ID=cds-UUE98355.1;Parent=gene-NDY24_22400;Dbxref=NCBI_GP:UUE98355.1;Name=UUE98355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444921.1;locus_tag=NDY24_22400;product=VOC family protein;protein_id=UUE98355.1;transl_table=11 CP098602.1 Genbank gene 5175380 5176732 . + . ID=gene-NDY24_22405;Name=NDY24_22405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22405 CP098602.1 Protein Homology CDS 5175380 5176732 . + 0 ID=cds-UUE98356.1;Parent=gene-NDY24_22405;Dbxref=NCBI_GP:UUE98356.1;Name=UUE98356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003474529.1;locus_tag=NDY24_22405;product=PLP-dependent aminotransferase family protein;protein_id=UUE98356.1;transl_table=11 CP098602.1 Genbank gene 5176817 5176893 . + . ID=gene-NDY24_22410;Name=NDY24_22410;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NDY24_22410 CP098602.1 cmsearch ncRNA 5176817 5176893 . + . ID=rna-NDY24_22410;Parent=gene-NDY24_22410;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_22410;product=sX9 sRNA CP098602.1 cmsearch exon 5176817 5176893 . + . ID=exon-NDY24_22410-1;Parent=rna-NDY24_22410;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NDY24_22410;product=sX9 sRNA CP098602.1 Genbank pseudogene 5176888 5178034 . - . ID=gene-NDY24_22415;Name=NDY24_22415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_22415;pseudo=true CP098602.1 Protein Homology CDS 5176888 5178034 . - 0 ID=cds-NDY24_22415;Parent=gene-NDY24_22415;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003104946.1;locus_tag=NDY24_22415;product=alpha-hydroxy-acid oxidizing protein;pseudo=true;transl_table=11 CP098602.1 Genbank gene 5178156 5178698 . + . ID=gene-NDY24_22420;Name=NDY24_22420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22420 CP098602.1 Protein Homology CDS 5178156 5178698 . + 0 ID=cds-UUE98357.1;Parent=gene-NDY24_22420;Dbxref=NCBI_GP:UUE98357.1;Name=UUE98357.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: protein motif:HMM:NF024698.2;locus_tag=NDY24_22420;product=GNAT family N-acetyltransferase;protein_id=UUE98357.1;transl_table=11 CP098602.1 Genbank gene 5178765 5179796 . - . ID=gene-NDY24_22425;Name=NDY24_22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22425 CP098602.1 Protein Homology CDS 5178765 5179796 . - 0 ID=cds-UUE98358.1;Parent=gene-NDY24_22425;Dbxref=NCBI_GP:UUE98358.1;Name=UUE98358.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024860.2;locus_tag=NDY24_22425;product=sulfotransferase;protein_id=UUE98358.1;transl_table=11 CP098602.1 Genbank gene 5180391 5180466 . - . ID=gene-NDY24_22430;Name=NDY24_22430;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_22430 CP098602.1 tRNAscan-SE tRNA 5180391 5180466 . - . ID=rna-NDY24_22430;Parent=gene-NDY24_22430;anticodon=(pos:complement(5180431..5180433));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_22430;product=tRNA-Gly CP098602.1 tRNAscan-SE exon 5180391 5180466 . - . ID=exon-NDY24_22430-1;Parent=rna-NDY24_22430;anticodon=(pos:complement(5180431..5180433));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_22430;product=tRNA-Gly CP098602.1 Genbank gene 5180503 5181135 . - . ID=gene-NDY24_22435;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=NDY24_22435 CP098602.1 Protein Homology CDS 5180503 5181135 . - 0 ID=cds-UUE98359.1;Parent=gene-NDY24_22435;Dbxref=NCBI_GP:UUE98359.1;Name=UUE98359.1;Ontology_term=GO:0008654,GO:0008444;gbkey=CDS;gene=pgsA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017910971.1;locus_tag=NDY24_22435;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=UUE98359.1;transl_table=11 CP098602.1 Genbank gene 5181135 5182991 . - . ID=gene-NDY24_22440;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=NDY24_22440 CP098602.1 Protein Homology CDS 5181135 5182991 . - 0 ID=cds-UUE98360.1;Parent=gene-NDY24_22440;Dbxref=NCBI_GP:UUE98360.1;Name=UUE98360.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237626.1;locus_tag=NDY24_22440;product=excinuclease ABC subunit UvrC;protein_id=UUE98360.1;transl_table=11 CP098602.1 Genbank gene 5182988 5184406 . - . ID=gene-NDY24_22445;Name=NDY24_22445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22445 CP098602.1 Protein Homology CDS 5182988 5184406 . - 0 ID=cds-UUE98361.1;Parent=gene-NDY24_22445;Dbxref=NCBI_GP:UUE98361.1;Name=UUE98361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113177.1;locus_tag=NDY24_22445;product=hypothetical protein;protein_id=UUE98361.1;transl_table=11 CP098602.1 Genbank gene 5184430 5184894 . - . ID=gene-NDY24_22450;Name=NDY24_22450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22450 CP098602.1 Protein Homology CDS 5184430 5184894 . - 0 ID=cds-UUE98362.1;Parent=gene-NDY24_22450;Dbxref=NCBI_GP:UUE98362.1;Name=UUE98362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452738.1;locus_tag=NDY24_22450;product=low molecular weight phosphotyrosine protein phosphatase;protein_id=UUE98362.1;transl_table=11 CP098602.1 Genbank gene 5184891 5185670 . - . ID=gene-NDY24_22455;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=NDY24_22455 CP098602.1 Protein Homology CDS 5184891 5185670 . - 0 ID=cds-UUE98363.1;Parent=gene-NDY24_22455;Dbxref=NCBI_GP:UUE98363.1;Name=UUE98363.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373332.1;locus_tag=NDY24_22455;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=UUE98363.1;transl_table=11 CP098602.1 Genbank gene 5185990 5187027 . - . ID=gene-NDY24_22460;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=NDY24_22460 CP098602.1 Protein Homology CDS 5185990 5187027 . - 0 ID=cds-UUE98364.1;Parent=gene-NDY24_22460;Dbxref=NCBI_GP:UUE98364.1;Name=UUE98364.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449592.1;locus_tag=NDY24_22460;product=tetraacyldisaccharide 4'-kinase;protein_id=UUE98364.1;transl_table=11 CP098602.1 Genbank gene 5187024 5188793 . - . ID=gene-NDY24_22465;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=NDY24_22465 CP098602.1 Protein Homology CDS 5187024 5188793 . - 0 ID=cds-UUE98365.1;Parent=gene-NDY24_22465;Dbxref=NCBI_GP:UUE98365.1;Name=UUE98365.1;Ontology_term=GO:0006869,GO:0005319;gbkey=CDS;gene=msbA;go_function=lipid transporter activity|0005319||IEA;go_process=lipid transport|0006869||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158537.1;locus_tag=NDY24_22465;product=lipid A export permease/ATP-binding protein MsbA;protein_id=UUE98365.1;transl_table=11 CP098602.1 Genbank gene 5188790 5189254 . - . ID=gene-NDY24_22470;Name=NDY24_22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22470 CP098602.1 Protein Homology CDS 5188790 5189254 . - 0 ID=cds-UUE98366.1;Parent=gene-NDY24_22470;Dbxref=NCBI_GP:UUE98366.1;Name=UUE98366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115686.1;locus_tag=NDY24_22470;product=biopolymer transporter ExbD;protein_id=UUE98366.1;transl_table=11 CP098602.1 Genbank gene 5189258 5189920 . - . ID=gene-NDY24_22475;Name=NDY24_22475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22475 CP098602.1 Protein Homology CDS 5189258 5189920 . - 0 ID=cds-UUE98367.1;Parent=gene-NDY24_22475;Dbxref=NCBI_GP:UUE98367.1;Name=UUE98367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916730.1;locus_tag=NDY24_22475;product=MotA/TolQ/ExbB proton channel family protein;protein_id=UUE98367.1;transl_table=11 CP098602.1 Genbank gene 5189949 5192375 . - . ID=gene-NDY24_22480;Name=NDY24_22480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22480 CP098602.1 Protein Homology CDS 5189949 5192375 . - 0 ID=cds-UUE98368.1;Parent=gene-NDY24_22480;Dbxref=NCBI_GP:UUE98368.1;Name=UUE98368.1;Ontology_term=GO:0009290,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258977.1;locus_tag=NDY24_22480;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=UUE98368.1;transl_table=11 CP098602.1 Genbank gene 5192543 5193607 . + . ID=gene-NDY24_22485;Name=NDY24_22485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22485 CP098602.1 Protein Homology CDS 5192543 5193607 . + 0 ID=cds-UUE98369.1;Parent=gene-NDY24_22485;Dbxref=NCBI_GP:UUE98369.1;Name=UUE98369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303656.1;locus_tag=NDY24_22485;product=SDR family oxidoreductase;protein_id=UUE98369.1;transl_table=11 CP098602.1 Genbank gene 5193828 5194562 . - . ID=gene-NDY24_22490;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=NDY24_22490 CP098602.1 Protein Homology CDS 5193828 5194562 . - 0 ID=cds-UUE98370.1;Parent=gene-NDY24_22490;Dbxref=NCBI_GP:UUE98370.1;Name=UUE98370.1;Ontology_term=GO:0042953,GO:0005524,GO:0043190;gbkey=CDS;gene=lolD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472015.1;locus_tag=NDY24_22490;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=UUE98370.1;transl_table=11 CP098602.1 Genbank gene 5194555 5195796 . - . ID=gene-NDY24_22495;Name=NDY24_22495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22495 CP098602.1 Protein Homology CDS 5194555 5195796 . - 0 ID=cds-UUE98371.1;Parent=gene-NDY24_22495;Dbxref=NCBI_GP:UUE98371.1;Name=UUE98371.1;Ontology_term=GO:0042953,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902586.1;locus_tag=NDY24_22495;product=lipoprotein-releasing ABC transporter permease subunit;protein_id=UUE98371.1;transl_table=11 CP098602.1 Genbank gene 5195802 5196272 . - . ID=gene-NDY24_22500;Name=NDY24_22500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22500 CP098602.1 Protein Homology CDS 5195802 5196272 . - 0 ID=cds-UUE98372.1;Parent=gene-NDY24_22500;Dbxref=NCBI_GP:UUE98372.1;Name=UUE98372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156610.1;locus_tag=NDY24_22500;product=hypothetical protein;protein_id=UUE98372.1;transl_table=11 CP098602.1 Genbank gene 5196223 5196471 . - . ID=gene-NDY24_22505;Name=NDY24_22505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22505 CP098602.1 Protein Homology CDS 5196223 5196471 . - 0 ID=cds-UUE98373.1;Parent=gene-NDY24_22505;Dbxref=NCBI_GP:UUE98373.1;Name=UUE98373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802215.1;locus_tag=NDY24_22505;product=succinate dehydrogenase assembly factor 2;protein_id=UUE98373.1;transl_table=11 CP098602.1 Genbank gene 5196581 5197363 . - . ID=gene-NDY24_22510;Name=NDY24_22510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22510 CP098602.1 Protein Homology CDS 5196581 5197363 . - 0 ID=cds-UUE98374.1;Parent=gene-NDY24_22510;Dbxref=NCBI_GP:UUE98374.1;Name=UUE98374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037280.1;locus_tag=NDY24_22510;product=succinate dehydrogenase iron-sulfur subunit;protein_id=UUE98374.1;transl_table=11 CP098602.1 Genbank gene 5197380 5197589 . - . ID=gene-NDY24_22515;Name=NDY24_22515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22515 CP098602.1 Protein Homology CDS 5197380 5197589 . - 0 ID=cds-UUE98375.1;Parent=gene-NDY24_22515;Dbxref=NCBI_GP:UUE98375.1;Name=UUE98375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995654.1;locus_tag=NDY24_22515;product=hypothetical protein;protein_id=UUE98375.1;transl_table=11 CP098602.1 Genbank gene 5197593 5199383 . - . ID=gene-NDY24_22520;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=NDY24_22520 CP098602.1 Protein Homology CDS 5197593 5199383 . - 0 ID=cds-UUE98376.1;Parent=gene-NDY24_22520;Dbxref=NCBI_GP:UUE98376.1;Name=UUE98376.1;Ontology_term=GO:0006099,GO:0022900,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851880.1;locus_tag=NDY24_22520;product=succinate dehydrogenase flavoprotein subunit;protein_id=UUE98376.1;transl_table=11 CP098602.1 Genbank gene 5199418 5199804 . - . ID=gene-NDY24_22525;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=NDY24_22525 CP098602.1 Protein Homology CDS 5199418 5199804 . - 0 ID=cds-UUE98377.1;Parent=gene-NDY24_22525;Dbxref=NCBI_GP:UUE98377.1;Name=UUE98377.1;Ontology_term=GO:0006099,GO:0000104,GO:0045282;gbkey=CDS;gene=sdhD;go_component=plasma membrane succinate dehydrogenase complex|0045282||IEA;go_function=succinate dehydrogenase activity|0000104||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995651.1;locus_tag=NDY24_22525;product=succinate dehydrogenase%2C hydrophobic membrane anchor protein;protein_id=UUE98377.1;transl_table=11 CP098602.1 Genbank gene 5199801 5200193 . - . ID=gene-NDY24_22530;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;locus_tag=NDY24_22530 CP098602.1 Protein Homology CDS 5199801 5200193 . - 0 ID=cds-UUE98378.1;Parent=gene-NDY24_22530;Dbxref=NCBI_GP:UUE98378.1;Name=UUE98378.1;Ontology_term=GO:0006099,GO:0000104,GO:0045282;gbkey=CDS;gene=sdhC;go_component=plasma membrane succinate dehydrogenase complex|0045282||IEA;go_function=succinate dehydrogenase activity|0000104||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005416132.1;locus_tag=NDY24_22530;product=succinate dehydrogenase%2C cytochrome b556 subunit;protein_id=UUE98378.1;transl_table=11 CP098602.1 Genbank gene 5200460 5201332 . + . ID=gene-NDY24_22535;Name=NDY24_22535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22535 CP098602.1 Protein Homology CDS 5200460 5201332 . + 0 ID=cds-UUE98379.1;Parent=gene-NDY24_22535;Dbxref=NCBI_GP:UUE98379.1;Name=UUE98379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300222.1;locus_tag=NDY24_22535;product=folate-binding protein;protein_id=UUE98379.1;transl_table=11 CP098602.1 Genbank gene 5201329 5202417 . - . ID=gene-NDY24_22540;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=NDY24_22540 CP098602.1 Protein Homology CDS 5201329 5202417 . - 0 ID=cds-UUE98380.1;Parent=gene-NDY24_22540;Dbxref=NCBI_GP:UUE98380.1;Name=UUE98380.1;Ontology_term=GO:0005524,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174187.1;locus_tag=NDY24_22540;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=UUE98380.1;transl_table=11 CP098602.1 Genbank gene 5202839 5204269 . + . ID=gene-NDY24_22545;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=NDY24_22545 CP098602.1 Protein Homology CDS 5202839 5204269 . + 0 ID=cds-UUE98381.1;Parent=gene-NDY24_22545;Dbxref=NCBI_GP:UUE98381.1;Name=UUE98381.1;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016945345.1;locus_tag=NDY24_22545;product=glucose-6-phosphate dehydrogenase;protein_id=UUE98381.1;transl_table=11 CP098602.1 Genbank gene 5204266 5205273 . + . ID=gene-NDY24_22550;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=NDY24_22550 CP098602.1 Protein Homology CDS 5204266 5205273 . + 0 ID=cds-UUE98382.1;Parent=gene-NDY24_22550;Dbxref=NCBI_GP:UUE98382.1;Name=UUE98382.1;Ontology_term=GO:0005975,GO:0004340;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802227.1;locus_tag=NDY24_22550;product=glucokinase;protein_id=UUE98382.1;transl_table=11 CP098602.1 Genbank gene 5205270 5205989 . + . ID=gene-NDY24_22555;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=NDY24_22555 CP098602.1 Protein Homology CDS 5205270 5205989 . + 0 ID=cds-UUE98383.1;Parent=gene-NDY24_22555;Dbxref=NCBI_GP:UUE98383.1;Name=UUE98383.1;Ontology_term=GO:0006098,GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090237.1;locus_tag=NDY24_22555;product=6-phosphogluconolactonase;protein_id=UUE98383.1;transl_table=11 CP098602.1 Genbank gene 5206110 5208026 . + . ID=gene-NDY24_22560;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=NDY24_22560 CP098602.1 Protein Homology CDS 5206110 5208026 . + 0 ID=cds-UUE98384.1;Parent=gene-NDY24_22560;Dbxref=NCBI_GP:UUE98384.1;Name=UUE98384.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472018.1;locus_tag=NDY24_22560;product=phosphogluconate dehydratase;protein_id=UUE98384.1;transl_table=11 CP098602.1 Genbank gene 5208078 5208737 . + . ID=gene-NDY24_22565;Name=NDY24_22565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22565 CP098602.1 Protein Homology CDS 5208078 5208737 . + 0 ID=cds-UUE98385.1;Parent=gene-NDY24_22565;Dbxref=NCBI_GP:UUE98385.1;Name=UUE98385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482798.1;locus_tag=NDY24_22565;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=UUE98385.1;transl_table=11 CP098602.1 Genbank gene 5209811 5212897 . - . ID=gene-NDY24_22570;Name=NDY24_22570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22570 CP098602.1 Protein Homology CDS 5209811 5212897 . - 0 ID=cds-UUE98386.1;Parent=gene-NDY24_22570;Dbxref=NCBI_GP:UUE98386.1;Name=UUE98386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005923377.1;locus_tag=NDY24_22570;product=efflux RND transporter permease subunit;protein_id=UUE98386.1;transl_table=11 CP098602.1 Genbank pseudogene 5212894 5216407 . - . ID=gene-NDY24_00005;Name=NDY24_00005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_00005;pseudo=true CP098602.1 Protein Homology CDS 5212894 5216407 . - 0 ID=cds-NDY24_00005;Parent=gene-NDY24_00005;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482800.1;locus_tag=NDY24_00005;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11 ##sequence-region CP098603.1 1 93769 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=453602 CP098603.1 Genbank region 1 93769 . + . ID=CP098603.1:1..93769;Dbxref=taxon:453602;Is_circular=true;Name=pOSU498;collection-date=2022;country=USA: WI;gbkey=Src;genome=plasmid;isolation-source=leaf sample;mol_type=genomic DNA;nat-host=geranium;pathovar=pelargonii;plasmid-name=pOSU498;strain=OSU498 CP098603.1 Genbank gene 457 633 . + . ID=gene-NDY24_22580;Name=NDY24_22580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22580 CP098603.1 GeneMarkS-2+ CDS 457 633 . + 0 ID=cds-UUF00582.1;Parent=gene-NDY24_22580;Dbxref=NCBI_GP:UUF00582.1;Name=UUF00582.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22580;product=hypothetical protein;protein_id=UUF00582.1;transl_table=11 CP098603.1 Genbank gene 630 1580 . - . ID=gene-NDY24_22585;Name=NDY24_22585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22585 CP098603.1 Protein Homology CDS 630 1580 . - 0 ID=cds-UUF00583.1;Parent=gene-NDY24_22585;Dbxref=NCBI_GP:UUF00583.1;Name=UUF00583.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007635327.1;locus_tag=NDY24_22585;product=IS481 family transposase;protein_id=UUF00583.1;transl_table=11 CP098603.1 Genbank gene 1745 2233 . - . ID=gene-NDY24_22590;Name=NDY24_22590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22590 CP098603.1 Protein Homology CDS 1745 2233 . - 0 ID=cds-UUF00584.1;Parent=gene-NDY24_22590;Dbxref=NCBI_GP:UUF00584.1;Name=UUF00584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020318292.1;locus_tag=NDY24_22590;product=type III effector;protein_id=UUF00584.1;transl_table=11 CP098603.1 Genbank gene 2786 2950 . + . ID=gene-NDY24_22595;Name=NDY24_22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22595 CP098603.1 GeneMarkS-2+ CDS 2786 2950 . + 0 ID=cds-UUF00585.1;Parent=gene-NDY24_22595;Dbxref=NCBI_GP:UUF00585.1;Name=UUF00585.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22595;product=hypothetical protein;protein_id=UUF00585.1;transl_table=11 CP098603.1 Genbank pseudogene 3085 4451 . - . ID=gene-NDY24_22600;Name=NDY24_22600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_22600;pseudo=true CP098603.1 Protein Homology CDS 3085 4451 . - 0 ID=cds-NDY24_22600;Parent=gene-NDY24_22600;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035783.1;locus_tag=NDY24_22600;product=IS5 family transposase;pseudo=true;transl_table=11 CP098603.1 Genbank gene 4585 4914 . + . ID=gene-NDY24_22605;Name=NDY24_22605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22605 CP098603.1 Protein Homology CDS 4585 4914 . + 0 ID=cds-UUF00586.1;Parent=gene-NDY24_22605;Dbxref=NCBI_GP:UUF00586.1;Name=UUF00586.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025107.2;locus_tag=NDY24_22605;product=helix-turn-helix domain-containing protein;protein_id=UUF00586.1;transl_table=11 CP098603.1 Genbank gene 4990 5487 . + . ID=gene-NDY24_22610;Name=NDY24_22610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22610 CP098603.1 GeneMarkS-2+ CDS 4990 5487 . + 0 ID=cds-UUF00587.1;Parent=gene-NDY24_22610;Dbxref=NCBI_GP:UUF00587.1;Name=UUF00587.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22610;product=hypothetical protein;protein_id=UUF00587.1;transl_table=11 CP098603.1 Genbank gene 5797 6363 . - . ID=gene-NDY24_22615;Name=NDY24_22615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22615 CP098603.1 Protein Homology CDS 5797 6363 . - 0 ID=cds-UUF00588.1;Parent=gene-NDY24_22615;Dbxref=NCBI_GP:UUF00588.1;Name=UUF00588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009602860.1;locus_tag=NDY24_22615;product=recombinase family protein;protein_id=UUF00588.1;transl_table=11 CP098603.1 Genbank gene 6545 6796 . + . ID=gene-NDY24_22620;Name=NDY24_22620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22620 CP098603.1 Protein Homology CDS 6545 6796 . + 0 ID=cds-UUF00635.1;Parent=gene-NDY24_22620;Dbxref=NCBI_GP:UUF00635.1;Name=UUF00635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019334760.1;locus_tag=NDY24_22620;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=UUF00635.1;transl_table=11 CP098603.1 Genbank gene 6793 7188 . + . ID=gene-NDY24_22625;Name=NDY24_22625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22625 CP098603.1 Protein Homology CDS 6793 7188 . + 0 ID=cds-UUF00589.1;Parent=gene-NDY24_22625;Dbxref=NCBI_GP:UUF00589.1;Name=UUF00589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172645.1;locus_tag=NDY24_22625;product=type II toxin-antitoxin system VapC family toxin;protein_id=UUF00589.1;transl_table=11 CP098603.1 Genbank gene 7692 7892 . + . ID=gene-NDY24_22630;Name=NDY24_22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22630 CP098603.1 GeneMarkS-2+ CDS 7692 7892 . + 0 ID=cds-UUF00590.1;Parent=gene-NDY24_22630;Dbxref=NCBI_GP:UUF00590.1;Name=UUF00590.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22630;product=hypothetical protein;protein_id=UUF00590.1;transl_table=11 CP098603.1 Genbank gene 8335 9156 . + . ID=gene-NDY24_22635;Name=NDY24_22635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22635 CP098603.1 Protein Homology CDS 8335 9156 . + 0 ID=cds-UUF00591.1;Parent=gene-NDY24_22635;Dbxref=NCBI_GP:UUF00591.1;Name=UUF00591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113814.1;locus_tag=NDY24_22635;product=hypothetical protein;protein_id=UUF00591.1;transl_table=11 CP098603.1 Genbank gene 10598 11302 . + . ID=gene-NDY24_22640;Name=NDY24_22640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22640 CP098603.1 Protein Homology CDS 10598 11302 . + 0 ID=cds-UUF00592.1;Parent=gene-NDY24_22640;Dbxref=NCBI_GP:UUF00592.1;Name=UUF00592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113458.1;locus_tag=NDY24_22640;product=DNA-binding protein;protein_id=UUF00592.1;transl_table=11 CP098603.1 Genbank gene 11426 12064 . + . ID=gene-NDY24_22645;Name=NDY24_22645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22645 CP098603.1 Protein Homology CDS 11426 12064 . + 0 ID=cds-UUF00593.1;Parent=gene-NDY24_22645;Dbxref=NCBI_GP:UUF00593.1;Name=UUF00593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163694.1;locus_tag=NDY24_22645;product=ParA family protein;protein_id=UUF00593.1;transl_table=11 CP098603.1 Genbank gene 12061 12396 . + . ID=gene-NDY24_22650;Name=NDY24_22650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22650 CP098603.1 Protein Homology CDS 12061 12396 . + 0 ID=cds-UUF00594.1;Parent=gene-NDY24_22650;Dbxref=NCBI_GP:UUF00594.1;Name=UUF00594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163695.1;locus_tag=NDY24_22650;product=hypothetical protein;protein_id=UUF00594.1;transl_table=11 CP098603.1 Genbank pseudogene 12729 13175 . + . ID=gene-NDY24_22655;Name=NDY24_22655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_22655;pseudo=true CP098603.1 Protein Homology CDS 12729 13175 . + 0 ID=cds-NDY24_22655;Parent=gene-NDY24_22655;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019238174.1;locus_tag=NDY24_22655;product=DUF2840 domain-containing protein;pseudo=true;transl_table=11 CP098603.1 Genbank gene 13197 13793 . + . ID=gene-NDY24_22660;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=NDY24_22660 CP098603.1 Protein Homology CDS 13197 13793 . + 0 ID=cds-UUF00636.1;Parent=gene-NDY24_22660;Dbxref=NCBI_GP:UUF00636.1;Name=UUF00636.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: protein motif:HMM:NF021981.2;locus_tag=NDY24_22660;product=signal peptidase I;protein_id=UUF00636.1;transl_table=11 CP098603.1 Genbank gene 13786 14376 . + . ID=gene-NDY24_22665;Name=NDY24_22665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22665 CP098603.1 Protein Homology CDS 13786 14376 . + 0 ID=cds-UUF00595.1;Parent=gene-NDY24_22665;Dbxref=NCBI_GP:UUF00595.1;Name=UUF00595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113463.1;locus_tag=NDY24_22665;product=lytic transglycosylase domain-containing protein;protein_id=UUF00595.1;transl_table=11 CP098603.1 Genbank gene 15013 16824 . + . ID=gene-NDY24_22670;Name=NDY24_22670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22670 CP098603.1 Protein Homology CDS 15013 16824 . + 0 ID=cds-UUF00596.1;Parent=gene-NDY24_22670;Dbxref=NCBI_GP:UUF00596.1;Name=UUF00596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019238172.1;locus_tag=NDY24_22670;product=DUF3363 domain-containing protein;protein_id=UUF00596.1;transl_table=11 CP098603.1 Genbank gene 16821 17630 . + . ID=gene-NDY24_22675;Name=NDY24_22675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22675 CP098603.1 Protein Homology CDS 16821 17630 . + 0 ID=cds-UUF00597.1;Parent=gene-NDY24_22675;Dbxref=NCBI_GP:UUF00597.1;Name=UUF00597.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023271.2;locus_tag=NDY24_22675;product=DUF3363 domain-containing protein;protein_id=UUF00597.1;transl_table=11 CP098603.1 Genbank gene 17635 19692 . + . ID=gene-NDY24_22680;Name=traG;gbkey=Gene;gene=traG;gene_biotype=protein_coding;locus_tag=NDY24_22680 CP098603.1 Protein Homology CDS 17635 19692 . + 0 ID=cds-UUF00598.1;Parent=gene-NDY24_22680;Dbxref=NCBI_GP:UUF00598.1;Name=UUF00598.1;gbkey=CDS;gene=traG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113465.1;locus_tag=NDY24_22680;product=IncP-type conjugal transfer protein TraG;protein_id=UUF00598.1;transl_table=11 CP098603.1 Genbank gene 19689 20180 . + . ID=gene-NDY24_22685;Name=NDY24_22685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22685 CP098603.1 Protein Homology CDS 19689 20180 . + 0 ID=cds-UUF00599.1;Parent=gene-NDY24_22685;Dbxref=NCBI_GP:UUF00599.1;Name=UUF00599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451398.1;locus_tag=NDY24_22685;product=hypothetical protein;protein_id=UUF00599.1;transl_table=11 CP098603.1 Genbank pseudogene 20213 20751 . + . ID=gene-NDY24_22690;Name=NDY24_22690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_22690;pseudo=true CP098603.1 Protein Homology CDS 20213 20751 . + 0 ID=cds-NDY24_22690;Parent=gene-NDY24_22690;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019238169.1;locus_tag=NDY24_22690;product=plasmid pRiA4b ORF-3 family protein;pseudo=true;transl_table=11 CP098603.1 Genbank gene 20847 21239 . + . ID=gene-NDY24_22695;Name=NDY24_22695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22695 CP098603.1 Protein Homology CDS 20847 21239 . + 0 ID=cds-UUF00600.1;Parent=gene-NDY24_22695;Dbxref=NCBI_GP:UUF00600.1;Name=UUF00600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974941.1;locus_tag=NDY24_22695;product=hypothetical protein;protein_id=UUF00600.1;transl_table=11 CP098603.1 Genbank gene 21750 22571 . + . ID=gene-NDY24_22700;Name=NDY24_22700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22700 CP098603.1 Protein Homology CDS 21750 22571 . + 0 ID=cds-UUF00637.1;Parent=gene-NDY24_22700;Dbxref=NCBI_GP:UUF00637.1;Name=UUF00637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113814.1;locus_tag=NDY24_22700;product=hypothetical protein;protein_id=UUF00637.1;transl_table=11 CP098603.1 Genbank pseudogene 23253 23533 . - . ID=gene-NDY24_22705;Name=NDY24_22705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_22705;pseudo=true CP098603.1 Protein Homology CDS 23253 23533 . - 0 ID=cds-NDY24_22705;Parent=gene-NDY24_22705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019238166.1;locus_tag=NDY24_22705;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 CP098603.1 Genbank gene 23530 23868 . - . ID=gene-NDY24_22710;Name=NDY24_22710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22710 CP098603.1 Protein Homology CDS 23530 23868 . - 0 ID=cds-UUF00601.1;Parent=gene-NDY24_22710;Dbxref=NCBI_GP:UUF00601.1;Name=UUF00601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010378701.1;locus_tag=NDY24_22710;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=UUF00601.1;transl_table=11 CP098603.1 Genbank gene 24053 24310 . + . ID=gene-NDY24_22715;Name=NDY24_22715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22715 CP098603.1 Protein Homology CDS 24053 24310 . + 0 ID=cds-UUF00638.1;Parent=gene-NDY24_22715;Dbxref=NCBI_GP:UUF00638.1;Name=UUF00638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995706.1;locus_tag=NDY24_22715;product=helix-turn-helix domain-containing protein;protein_id=UUF00638.1;transl_table=11 CP098603.1 Genbank gene 24417 25301 . + . ID=gene-NDY24_22720;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=NDY24_22720 CP098603.1 Protein Homology CDS 24417 25301 . + 0 ID=cds-UUF00602.1;Parent=gene-NDY24_22720;Dbxref=NCBI_GP:UUF00602.1;Name=UUF00602.1;gbkey=CDS;gene=tadA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995704.1;locus_tag=NDY24_22720;product=Flp pilus assembly complex ATPase component TadA;protein_id=UUF00602.1;transl_table=11 CP098603.1 Genbank gene 25724 26341 . - . ID=gene-NDY24_22725;Name=NDY24_22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22725 CP098603.1 Protein Homology CDS 25724 26341 . - 0 ID=cds-UUF00603.1;Parent=gene-NDY24_22725;Dbxref=NCBI_GP:UUF00603.1;Name=UUF00603.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013122.2;locus_tag=NDY24_22725;product=3'-5' exonuclease;protein_id=UUF00603.1;transl_table=11 CP098603.1 Genbank gene 26998 27273 . + . ID=gene-NDY24_22730;Name=NDY24_22730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22730 CP098603.1 GeneMarkS-2+ CDS 26998 27273 . + 0 ID=cds-UUF00604.1;Parent=gene-NDY24_22730;Dbxref=NCBI_GP:UUF00604.1;Name=UUF00604.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22730;product=hypothetical protein;protein_id=UUF00604.1;transl_table=11 CP098603.1 Genbank gene 27317 27904 . - . ID=gene-NDY24_22735;Name=NDY24_22735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22735 CP098603.1 Protein Homology CDS 27317 27904 . - 0 ID=cds-UUF00605.1;Parent=gene-NDY24_22735;Dbxref=NCBI_GP:UUF00605.1;Name=UUF00605.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013601.2;locus_tag=NDY24_22735;product=ATP-binding domain-containing protein;protein_id=UUF00605.1;transl_table=11 CP098603.1 Genbank gene 27901 28848 . - . ID=gene-NDY24_22740;Name=NDY24_22740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22740 CP098603.1 Protein Homology CDS 27901 28848 . - 0 ID=cds-UUF00606.1;Parent=gene-NDY24_22740;Dbxref=NCBI_GP:UUF00606.1;Name=UUF00606.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024991.2;locus_tag=NDY24_22740;product=AAA family ATPase;protein_id=UUF00606.1;transl_table=11 CP098603.1 Genbank gene 28737 29603 . - . ID=gene-NDY24_22745;Name=NDY24_22745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22745 CP098603.1 Protein Homology CDS 28737 29603 . - 0 ID=cds-UUF00607.1;Parent=gene-NDY24_22745;Dbxref=NCBI_GP:UUF00607.1;Name=UUF00607.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020332.2;locus_tag=NDY24_22745;product=relaxase domain-containing protein;protein_id=UUF00607.1;transl_table=11 CP098603.1 Genbank pseudogene 29573 29701 . - . ID=gene-NDY24_22750;Name=NDY24_22750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_22750;pseudo=true CP098603.1 Protein Homology CDS 29573 29701 . - 0 ID=cds-NDY24_22750;Parent=gene-NDY24_22750;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020332.2;locus_tag=NDY24_22750;product=relaxase domain-containing protein;pseudo=true;transl_table=11 CP098603.1 Genbank gene 29695 30135 . - . ID=gene-NDY24_22755;Name=NDY24_22755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22755 CP098603.1 Protein Homology CDS 29695 30135 . - 0 ID=cds-UUF00608.1;Parent=gene-NDY24_22755;Dbxref=NCBI_GP:UUF00608.1;Name=UUF00608.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020332.2;locus_tag=NDY24_22755;product=relaxase domain-containing protein;protein_id=UUF00608.1;transl_table=11 CP098603.1 Genbank gene 30132 31679 . - . ID=gene-NDY24_22760;Name=NDY24_22760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22760 CP098603.1 Protein Homology CDS 30132 31679 . - 0 ID=cds-UUF00609.1;Parent=gene-NDY24_22760;Dbxref=NCBI_GP:UUF00609.1;Name=UUF00609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001001035.1;locus_tag=NDY24_22760;product=type IV secretion system DNA-binding domain-containing protein;protein_id=UUF00609.1;transl_table=11 CP098603.1 Genbank gene 31683 32021 . - . ID=gene-NDY24_22765;Name=NDY24_22765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22765 CP098603.1 GeneMarkS-2+ CDS 31683 32021 . - 0 ID=cds-UUF00610.1;Parent=gene-NDY24_22765;Dbxref=NCBI_GP:UUF00610.1;Name=UUF00610.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22765;product=hypothetical protein;protein_id=UUF00610.1;transl_table=11 CP098603.1 Genbank gene 32406 32852 . + . ID=gene-NDY24_22770;Name=NDY24_22770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22770 CP098603.1 Protein Homology CDS 32406 32852 . + 0 ID=cds-UUF00611.1;Parent=gene-NDY24_22770;Dbxref=NCBI_GP:UUF00611.1;Name=UUF00611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368869.1;locus_tag=NDY24_22770;product=hypothetical protein;protein_id=UUF00611.1;transl_table=11 CP098603.1 Genbank gene 32862 33557 . + . ID=gene-NDY24_22775;Name=NDY24_22775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22775 CP098603.1 Protein Homology CDS 32862 33557 . + 0 ID=cds-UUF00612.1;Parent=gene-NDY24_22775;Dbxref=NCBI_GP:UUF00612.1;Name=UUF00612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154898.1;locus_tag=NDY24_22775;product=hypothetical protein;protein_id=UUF00612.1;transl_table=11 CP098603.1 Genbank gene 33605 33952 . + . ID=gene-NDY24_22780;Name=NDY24_22780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22780 CP098603.1 GeneMarkS-2+ CDS 33605 33952 . + 0 ID=cds-UUF00613.1;Parent=gene-NDY24_22780;Dbxref=NCBI_GP:UUF00613.1;Name=UUF00613.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22780;product=hypothetical protein;protein_id=UUF00613.1;transl_table=11 CP098603.1 Genbank gene 33995 34309 . - . ID=gene-NDY24_22785;Name=NDY24_22785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22785 CP098603.1 GeneMarkS-2+ CDS 33995 34309 . - 0 ID=cds-UUF00614.1;Parent=gene-NDY24_22785;Dbxref=NCBI_GP:UUF00614.1;Name=UUF00614.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22785;product=hypothetical protein;protein_id=UUF00614.1;transl_table=11 CP098603.1 Genbank gene 34370 34804 . - . ID=gene-NDY24_22790;Name=NDY24_22790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22790 CP098603.1 Protein Homology CDS 34370 34804 . - 0 ID=cds-UUF00615.1;Parent=gene-NDY24_22790;Dbxref=NCBI_GP:UUF00615.1;Name=UUF00615.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015205.2;locus_tag=NDY24_22790;product=antirestriction protein;protein_id=UUF00615.1;transl_table=11 CP098603.1 Genbank gene 34819 35316 . - . ID=gene-NDY24_22795;Name=NDY24_22795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22795 CP098603.1 GeneMarkS-2+ CDS 34819 35316 . - 0 ID=cds-UUF00616.1;Parent=gene-NDY24_22795;Dbxref=NCBI_GP:UUF00616.1;Name=UUF00616.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22795;product=hypothetical protein;protein_id=UUF00616.1;transl_table=11 CP098603.1 Genbank gene 36022 36390 . - . ID=gene-NDY24_22800;Name=NDY24_22800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22800 CP098603.1 Protein Homology CDS 36022 36390 . - 0 ID=cds-UUF00617.1;Parent=gene-NDY24_22800;Dbxref=NCBI_GP:UUF00617.1;Name=UUF00617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113474.1;locus_tag=NDY24_22800;product=hypothetical protein;protein_id=UUF00617.1;transl_table=11 CP098603.1 Genbank gene 36466 36882 . - . ID=gene-NDY24_22805;Name=NDY24_22805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22805 CP098603.1 GeneMarkS-2+ CDS 36466 36882 . - 0 ID=cds-UUF00618.1;Parent=gene-NDY24_22805;Dbxref=NCBI_GP:UUF00618.1;Name=UUF00618.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22805;product=hypothetical protein;protein_id=UUF00618.1;transl_table=11 CP098603.1 Genbank gene 36879 37181 . - . ID=gene-NDY24_22810;Name=NDY24_22810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22810 CP098603.1 Protein Homology CDS 36879 37181 . - 0 ID=cds-UUF00619.1;Parent=gene-NDY24_22810;Dbxref=NCBI_GP:UUF00619.1;Name=UUF00619.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014691.2;locus_tag=NDY24_22810;product=Fic family protein;protein_id=UUF00619.1;transl_table=11 CP098603.1 Genbank gene 37396 37803 . - . ID=gene-NDY24_22815;Name=NDY24_22815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22815 CP098603.1 GeneMarkS-2+ CDS 37396 37803 . - 0 ID=cds-UUF00620.1;Parent=gene-NDY24_22815;Dbxref=NCBI_GP:UUF00620.1;Name=UUF00620.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22815;product=hypothetical protein;protein_id=UUF00620.1;transl_table=11 CP098603.1 Genbank gene 37824 38012 . - . ID=gene-NDY24_22820;Name=NDY24_22820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22820 CP098603.1 Protein Homology CDS 37824 38012 . - 0 ID=cds-UUF00621.1;Parent=gene-NDY24_22820;Dbxref=NCBI_GP:UUF00621.1;Name=UUF00621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004861683.1;locus_tag=NDY24_22820;product=antitoxin VbhA family protein;protein_id=UUF00621.1;transl_table=11 CP098603.1 Genbank gene 38005 38316 . - . ID=gene-NDY24_22825;Name=NDY24_22825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22825 CP098603.1 Protein Homology CDS 38005 38316 . - 0 ID=cds-UUF00622.1;Parent=gene-NDY24_22825;Dbxref=NCBI_GP:UUF00622.1;Name=UUF00622.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027824.2;locus_tag=NDY24_22825;product=transcriptional regulator KorA;protein_id=UUF00622.1;transl_table=11 CP098603.1 Genbank gene 38441 38683 . - . ID=gene-NDY24_22830;Name=NDY24_22830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22830 CP098603.1 GeneMarkS-2+ CDS 38441 38683 . - 0 ID=cds-UUF00623.1;Parent=gene-NDY24_22830;Dbxref=NCBI_GP:UUF00623.1;Name=UUF00623.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22830;product=hypothetical protein;protein_id=UUF00623.1;transl_table=11 CP098603.1 Genbank gene 38688 38909 . - . ID=gene-NDY24_22835;Name=NDY24_22835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22835 CP098603.1 Protein Homology CDS 38688 38909 . - 0 ID=cds-UUF00624.1;Parent=gene-NDY24_22835;Dbxref=NCBI_GP:UUF00624.1;Name=UUF00624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010890114.1;locus_tag=NDY24_22835;product=DUF2688 domain-containing protein;protein_id=UUF00624.1;transl_table=11 CP098603.1 Genbank gene 38906 39529 . - . ID=gene-NDY24_22840;Name=NDY24_22840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22840 CP098603.1 GeneMarkS-2+ CDS 38906 39529 . - 0 ID=cds-UUF00625.1;Parent=gene-NDY24_22840;Dbxref=NCBI_GP:UUF00625.1;Name=UUF00625.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22840;product=hypothetical protein;protein_id=UUF00625.1;transl_table=11 CP098603.1 Genbank gene 39582 40406 . - . ID=gene-NDY24_22845;Name=NDY24_22845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22845 CP098603.1 Protein Homology CDS 39582 40406 . - 0 ID=cds-UUF00626.1;Parent=gene-NDY24_22845;Dbxref=NCBI_GP:UUF00626.1;Name=UUF00626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006156708.1;locus_tag=NDY24_22845;product=DUF945 domain-containing protein;protein_id=UUF00626.1;transl_table=11 CP098603.1 Genbank gene 41851 42063 . + . ID=gene-NDY24_22850;Name=NDY24_22850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22850 CP098603.1 GeneMarkS-2+ CDS 41851 42063 . + 0 ID=cds-UUF00627.1;Parent=gene-NDY24_22850;Dbxref=NCBI_GP:UUF00627.1;Name=UUF00627.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22850;product=hypothetical protein;protein_id=UUF00627.1;transl_table=11 CP098603.1 Genbank gene 42171 42893 . - . ID=gene-NDY24_22855;Name=NDY24_22855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22855 CP098603.1 Protein Homology CDS 42171 42893 . - 0 ID=cds-UUF00628.1;Parent=gene-NDY24_22855;Dbxref=NCBI_GP:UUF00628.1;Name=UUF00628.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019054416.1;locus_tag=NDY24_22855;product=N-6 DNA methylase;protein_id=UUF00628.1;transl_table=11 CP098603.1 Genbank gene 42981 43238 . - . ID=gene-NDY24_22860;Name=NDY24_22860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22860 CP098603.1 GeneMarkS-2+ CDS 42981 43238 . - 0 ID=cds-UUF00629.1;Parent=gene-NDY24_22860;Dbxref=NCBI_GP:UUF00629.1;Name=UUF00629.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22860;product=hypothetical protein;protein_id=UUF00629.1;transl_table=11 CP098603.1 Genbank gene 43297 45378 . - . ID=gene-NDY24_22865;Name=NDY24_22865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22865 CP098603.1 Protein Homology CDS 43297 45378 . - 0 ID=cds-UUF00630.1;Parent=gene-NDY24_22865;Dbxref=NCBI_GP:UUF00630.1;Name=UUF00630.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014273.2;locus_tag=NDY24_22865;product=ParB/RepB/Spo0J family partition protein;protein_id=UUF00630.1;transl_table=11 CP098603.1 Genbank gene 46676 46912 . - . ID=gene-NDY24_22870;Name=NDY24_22870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22870 CP098603.1 Protein Homology CDS 46676 46912 . - 0 ID=cds-UUF00631.1;Parent=gene-NDY24_22870;Dbxref=NCBI_GP:UUF00631.1;Name=UUF00631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011345676.1;locus_tag=NDY24_22870;product=hypothetical protein;protein_id=UUF00631.1;transl_table=11 CP098603.1 Genbank gene 46996 47553 . - . ID=gene-NDY24_22875;Name=NDY24_22875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22875 CP098603.1 Protein Homology CDS 46996 47553 . - 0 ID=cds-UUF00535.1;Parent=gene-NDY24_22875;Dbxref=NCBI_GP:UUF00535.1;Name=UUF00535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171841.1;locus_tag=NDY24_22875;product=restriction endonuclease;protein_id=UUF00535.1;transl_table=11 CP098603.1 Genbank gene 47566 48207 . - . ID=gene-NDY24_22880;Name=NDY24_22880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22880 CP098603.1 Protein Homology CDS 47566 48207 . - 0 ID=cds-UUF00536.1;Parent=gene-NDY24_22880;Dbxref=NCBI_GP:UUF00536.1;Name=UUF00536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003491420.1;locus_tag=NDY24_22880;product=DNA-binding protein;protein_id=UUF00536.1;transl_table=11 CP098603.1 Genbank gene 48519 48842 . - . ID=gene-NDY24_22885;Name=NDY24_22885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22885 CP098603.1 Protein Homology CDS 48519 48842 . - 0 ID=cds-UUF00537.1;Parent=gene-NDY24_22885;Dbxref=NCBI_GP:UUF00537.1;Name=UUF00537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015042066.1;locus_tag=NDY24_22885;product=hypothetical protein;protein_id=UUF00537.1;transl_table=11 CP098603.1 Genbank gene 49054 50547 . - . ID=gene-NDY24_22890;Name=NDY24_22890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22890 CP098603.1 Protein Homology CDS 49054 50547 . - 0 ID=cds-UUF00538.1;Parent=gene-NDY24_22890;Dbxref=NCBI_GP:UUF00538.1;Name=UUF00538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020750542.1;locus_tag=NDY24_22890;product=replication protein;protein_id=UUF00538.1;transl_table=11 CP098603.1 Genbank gene 50725 51045 . - . ID=gene-NDY24_22895;Name=NDY24_22895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22895 CP098603.1 Protein Homology CDS 50725 51045 . - 0 ID=cds-UUF00539.1;Parent=gene-NDY24_22895;Dbxref=NCBI_GP:UUF00539.1;Name=UUF00539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158333.1;locus_tag=NDY24_22895;product=hypothetical protein;protein_id=UUF00539.1;transl_table=11 CP098603.1 Genbank gene 51162 51467 . - . ID=gene-NDY24_22900;Name=NDY24_22900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22900 CP098603.1 Protein Homology CDS 51162 51467 . - 0 ID=cds-UUF00540.1;Parent=gene-NDY24_22900;Dbxref=NCBI_GP:UUF00540.1;Name=UUF00540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002718015.1;locus_tag=NDY24_22900;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=UUF00540.1;transl_table=11 CP098603.1 Genbank gene 51471 51929 . - . ID=gene-NDY24_22905;Name=NDY24_22905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22905 CP098603.1 Protein Homology CDS 51471 51929 . - 0 ID=cds-UUF00639.1;Parent=gene-NDY24_22905;Dbxref=NCBI_GP:UUF00639.1;Name=UUF00639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166857.1;locus_tag=NDY24_22905;product=hypothetical protein;protein_id=UUF00639.1;transl_table=11 CP098603.1 Genbank gene 52145 52465 . + . ID=gene-NDY24_22910;Name=NDY24_22910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22910 CP098603.1 Protein Homology CDS 52145 52465 . + 0 ID=cds-UUF00541.1;Parent=gene-NDY24_22910;Dbxref=NCBI_GP:UUF00541.1;Name=UUF00541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924088.1;locus_tag=NDY24_22910;product=hypothetical protein;protein_id=UUF00541.1;transl_table=11 CP098603.1 Genbank gene 52526 52861 . + . ID=gene-NDY24_22915;Name=NDY24_22915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22915 CP098603.1 GeneMarkS-2+ CDS 52526 52861 . + 0 ID=cds-UUF00542.1;Parent=gene-NDY24_22915;Dbxref=NCBI_GP:UUF00542.1;Name=UUF00542.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_22915;product=hypothetical protein;protein_id=UUF00542.1;transl_table=11 CP098603.1 Genbank gene 52908 53372 . - . ID=gene-NDY24_22920;Name=NDY24_22920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22920 CP098603.1 Protein Homology CDS 52908 53372 . - 0 ID=cds-UUF00543.1;Parent=gene-NDY24_22920;Dbxref=NCBI_GP:UUF00543.1;Name=UUF00543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450103.1;locus_tag=NDY24_22920;product=hypothetical protein;protein_id=UUF00543.1;transl_table=11 CP098603.1 Genbank gene 53723 54325 . - . ID=gene-NDY24_22925;Name=NDY24_22925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22925 CP098603.1 Protein Homology CDS 53723 54325 . - 0 ID=cds-UUF00544.1;Parent=gene-NDY24_22925;Dbxref=NCBI_GP:UUF00544.1;Name=UUF00544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450104.1;locus_tag=NDY24_22925;product=hypothetical protein;protein_id=UUF00544.1;transl_table=11 CP098603.1 Genbank gene 54471 55022 . + . ID=gene-NDY24_22930;Name=NDY24_22930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22930 CP098603.1 Protein Homology CDS 54471 55022 . + 0 ID=cds-UUF00545.1;Parent=gene-NDY24_22930;Dbxref=NCBI_GP:UUF00545.1;Name=UUF00545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014159632.1;locus_tag=NDY24_22930;product=3'-5' exoribonuclease;protein_id=UUF00545.1;transl_table=11 CP098603.1 Genbank gene 55115 55217 . + . ID=gene-NDY24_22935;Name=NDY24_22935;gbkey=Gene;gene_biotype=tRNA;locus_tag=NDY24_22935 CP098603.1 tRNAscan-SE tRNA 55115 55217 . + . ID=rna-NDY24_22935;Parent=gene-NDY24_22935;anticodon=(pos:55150..55152);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_22935;product=tRNA-Ile CP098603.1 tRNAscan-SE exon 55115 55217 . + . ID=exon-NDY24_22935-1;Parent=rna-NDY24_22935;anticodon=(pos:55150..55152);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=NDY24_22935;product=tRNA-Ile CP098603.1 Genbank gene 55221 55805 . - . ID=gene-NDY24_22940;Name=NDY24_22940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22940 CP098603.1 Protein Homology CDS 55221 55805 . - 0 ID=cds-UUF00546.1;Parent=gene-NDY24_22940;Dbxref=NCBI_GP:UUF00546.1;Name=UUF00546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019184711.1;locus_tag=NDY24_22940;product=SEC-C domain-containing protein;protein_id=UUF00546.1;transl_table=11 CP098603.1 Genbank gene 55893 56945 . - . ID=gene-NDY24_22945;Name=NDY24_22945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22945 CP098603.1 Protein Homology CDS 55893 56945 . - 0 ID=cds-UUF00547.1;Parent=gene-NDY24_22945;Dbxref=NCBI_GP:UUF00547.1;Name=UUF00547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014159630.1;locus_tag=NDY24_22945;product=DNA-binding protein;protein_id=UUF00547.1;transl_table=11 CP098603.1 Genbank gene 57218 58798 . + . ID=gene-NDY24_22950;Name=NDY24_22950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22950 CP098603.1 Protein Homology CDS 57218 58798 . + 0 ID=cds-UUF00548.1;Parent=gene-NDY24_22950;Dbxref=NCBI_GP:UUF00548.1;Name=UUF00548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005996627.1;locus_tag=NDY24_22950;product=AAA family ATPase;protein_id=UUF00548.1;transl_table=11 CP098603.1 Genbank gene 58776 59873 . + . ID=gene-NDY24_22955;Name=NDY24_22955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22955 CP098603.1 Protein Homology CDS 58776 59873 . + 0 ID=cds-UUF00549.1;Parent=gene-NDY24_22955;Dbxref=NCBI_GP:UUF00549.1;Name=UUF00549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012480224.1;locus_tag=NDY24_22955;product=AAA family ATPase;protein_id=UUF00549.1;transl_table=11 CP098603.1 Genbank gene 59889 60167 . - . ID=gene-NDY24_22960;Name=NDY24_22960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22960 CP098603.1 Protein Homology CDS 59889 60167 . - 0 ID=cds-UUF00550.1;Parent=gene-NDY24_22960;Dbxref=NCBI_GP:UUF00550.1;Name=UUF00550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014159622.1;locus_tag=NDY24_22960;product=hypothetical protein;protein_id=UUF00550.1;transl_table=11 CP098603.1 Genbank gene 60164 63361 . - . ID=gene-NDY24_22965;Name=NDY24_22965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22965 CP098603.1 Protein Homology CDS 60164 63361 . - 0 ID=cds-UUF00551.1;Parent=gene-NDY24_22965;Dbxref=NCBI_GP:UUF00551.1;Name=UUF00551.1;Ontology_term=GO:0051139,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=metal ion:proton antiporter activity|0051139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005996619.1;locus_tag=NDY24_22965;product=CusA/CzcA family heavy metal efflux RND transporter;protein_id=UUF00551.1;transl_table=11 CP098603.1 Genbank gene 63370 64317 . - . ID=gene-NDY24_22970;Name=NDY24_22970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22970 CP098603.1 Protein Homology CDS 63370 64317 . - 0 ID=cds-UUF00552.1;Parent=gene-NDY24_22970;Dbxref=NCBI_GP:UUF00552.1;Name=UUF00552.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005413378.1;locus_tag=NDY24_22970;product=efflux RND transporter periplasmic adaptor subunit;protein_id=UUF00552.1;transl_table=11 CP098603.1 Genbank gene 64314 65591 . - . ID=gene-NDY24_22975;Name=NDY24_22975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22975 CP098603.1 Protein Homology CDS 64314 65591 . - 0 ID=cds-UUF00553.1;Parent=gene-NDY24_22975;Dbxref=NCBI_GP:UUF00553.1;Name=UUF00553.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012480227.1;locus_tag=NDY24_22975;product=TolC family protein;protein_id=UUF00553.1;transl_table=11 CP098603.1 Genbank gene 65678 66034 . - . ID=gene-NDY24_22980;Name=NDY24_22980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22980 CP098603.1 Protein Homology CDS 65678 66034 . - 0 ID=cds-UUF00554.1;Parent=gene-NDY24_22980;Dbxref=NCBI_GP:UUF00554.1;Name=UUF00554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012480228.1;locus_tag=NDY24_22980;product=hypothetical protein;protein_id=UUF00554.1;transl_table=11 CP098603.1 Genbank gene 66031 66648 . - . ID=gene-NDY24_22985;Name=NDY24_22985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22985 CP098603.1 Protein Homology CDS 66031 66648 . - 0 ID=cds-UUF00555.1;Parent=gene-NDY24_22985;Dbxref=NCBI_GP:UUF00555.1;Name=UUF00555.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005413376.1;locus_tag=NDY24_22985;product=cation transporter;protein_id=UUF00555.1;transl_table=11 CP098603.1 Genbank pseudogene 66673 68630 . - . ID=gene-NDY24_22990;Name=NDY24_22990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_22990;pseudo=true CP098603.1 Protein Homology CDS 66673 68630 . - 0 ID=cds-NDY24_22990;Parent=gene-NDY24_22990;Note=frameshifted;Ontology_term=GO:0034755,GO:0005381,GO:0016020,GO:0033573;gbkey=CDS;go_component=membrane|0016020||IEA,high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012480229.1;locus_tag=NDY24_22990;product=FTR1 family protein;pseudo=true;transl_table=11 CP098603.1 Genbank gene 68721 69134 . + . ID=gene-NDY24_22995;Name=NDY24_22995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_22995 CP098603.1 Protein Homology CDS 68721 69134 . + 0 ID=cds-UUF00556.1;Parent=gene-NDY24_22995;Dbxref=NCBI_GP:UUF00556.1;Name=UUF00556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019184740.1;locus_tag=NDY24_22995;product=helix-turn-helix domain-containing protein;protein_id=UUF00556.1;transl_table=11 CP098603.1 Genbank gene 69131 70402 . + . ID=gene-NDY24_23000;Name=NDY24_23000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_23000 CP098603.1 Protein Homology CDS 69131 70402 . + 0 ID=cds-UUF00557.1;Parent=gene-NDY24_23000;Dbxref=NCBI_GP:UUF00557.1;Name=UUF00557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005413373.1;locus_tag=NDY24_23000;product=site-specific integrase;protein_id=UUF00557.1;transl_table=11 CP098603.1 Genbank gene 70426 73419 . + . ID=gene-NDY24_23005;Name=NDY24_23005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_23005 CP098603.1 Protein Homology CDS 70426 73419 . + 0 ID=cds-UUF00558.1;Parent=gene-NDY24_23005;Dbxref=NCBI_GP:UUF00558.1;Name=UUF00558.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014159602.1;locus_tag=NDY24_23005;product=Tn3 family transposase;protein_id=UUF00558.1;transl_table=11 CP098603.1 Genbank pseudogene 73505 73687 . + . ID=gene-NDY24_23010;Name=NDY24_23010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_23010;pseudo=true CP098603.1 Protein Homology CDS 73505 73687 . + 0 ID=cds-NDY24_23010;Parent=gene-NDY24_23010;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995704.1;locus_tag=NDY24_23010;product=type II/IV secretion system family protein;pseudo=true;transl_table=11 CP098603.1 Genbank gene 73813 74076 . + . ID=gene-NDY24_23015;Name=NDY24_23015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_23015 CP098603.1 Protein Homology CDS 73813 74076 . + 0 ID=cds-UUF00632.1;Parent=gene-NDY24_23015;Dbxref=NCBI_GP:UUF00632.1;Name=UUF00632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007662409.1;locus_tag=NDY24_23015;product=TrbC/VirB2 family protein;protein_id=UUF00632.1;transl_table=11 CP098603.1 Genbank gene 74079 74345 . + . ID=gene-NDY24_23020;Name=NDY24_23020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_23020 CP098603.1 Protein Homology CDS 74079 74345 . + 0 ID=cds-UUF00559.1;Parent=gene-NDY24_23020;Dbxref=NCBI_GP:UUF00559.1;Name=UUF00559.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016957.2;locus_tag=NDY24_23020;product=VirB3 family type IV secretion system protein;protein_id=UUF00559.1;transl_table=11 CP098603.1 Genbank gene 74413 76332 . + . ID=gene-NDY24_23025;Name=NDY24_23025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_23025 CP098603.1 Protein Homology CDS 74413 76332 . + 0 ID=cds-UUF00560.1;Parent=gene-NDY24_23025;Dbxref=NCBI_GP:UUF00560.1;Name=UUF00560.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015118.2;locus_tag=NDY24_23025;product=DUF853 domain-containing protein;protein_id=UUF00560.1;transl_table=11 CP098603.1 Genbank gene 76320 76982 . + . ID=gene-NDY24_23030;Name=NDY24_23030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_23030 CP098603.1 Protein Homology CDS 76320 76982 . + 0 ID=cds-UUF00561.1;Parent=gene-NDY24_23030;Dbxref=NCBI_GP:UUF00561.1;Name=UUF00561.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040179.1;locus_tag=NDY24_23030;product=DUF853 family protein;protein_id=UUF00561.1;transl_table=11 CP098603.1 Genbank gene 77121 77786 . + . ID=gene-NDY24_23035;Name=NDY24_23035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_23035 CP098603.1 GeneMarkS-2+ CDS 77121 77786 . + 0 ID=cds-UUF00562.1;Parent=gene-NDY24_23035;Dbxref=NCBI_GP:UUF00562.1;Name=UUF00562.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_23035;product=conjugal transfer protein;protein_id=UUF00562.1;transl_table=11 CP098603.1 Genbank gene 78148 78507 . + . ID=gene-NDY24_23040;Name=NDY24_23040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_23040 CP098603.1 GeneMarkS-2+ CDS 78148 78507 . + 0 ID=cds-UUF00563.1;Parent=gene-NDY24_23040;Dbxref=NCBI_GP:UUF00563.1;Name=UUF00563.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_23040;product=hypothetical protein;protein_id=UUF00563.1;transl_table=11 CP098603.1 Genbank gene 78566 79249 . + . ID=gene-NDY24_23045;Name=NDY24_23045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_23045 CP098603.1 Protein Homology CDS 78566 79249 . + 0 ID=cds-UUF00564.1;Parent=gene-NDY24_23045;Dbxref=NCBI_GP:UUF00564.1;Name=UUF00564.1;Ontology_term=GO:0030255;gbkey=CDS;go_process=protein secretion by the type IV secretion system|0030255||IEA;inference=COORDINATES: protein motif:HMM:NF016491.2;locus_tag=NDY24_23045;product=type IV secretion system protein;protein_id=UUF00564.1;transl_table=11 CP098603.1 Genbank gene 79267 80043 . + . ID=gene-NDY24_23050;Name=NDY24_23050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_23050 CP098603.1 GeneMarkS-2+ CDS 79267 80043 . + 0 ID=cds-UUF00565.1;Parent=gene-NDY24_23050;Dbxref=NCBI_GP:UUF00565.1;Name=UUF00565.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_23050;product=hypothetical protein;protein_id=UUF00565.1;transl_table=11 CP098603.1 Genbank pseudogene 80110 80771 . + . ID=gene-NDY24_23055;Name=trbF;gbkey=Gene;gene=trbF;gene_biotype=pseudogene;locus_tag=NDY24_23055;pseudo=true CP098603.1 Protein Homology CDS 80110 80771 . + 0 ID=cds-NDY24_23055;Parent=gene-NDY24_23055;Note=frameshifted;gbkey=CDS;gene=trbF;inference=COORDINATES: protein motif:HMM:NF016238.2;locus_tag=NDY24_23055;product=conjugal transfer protein TrbF;pseudo=true;transl_table=11 CP098603.1 Genbank gene 80785 81777 . + . ID=gene-NDY24_23060;Name=trbG;gbkey=Gene;gene=trbG;gene_biotype=protein_coding;locus_tag=NDY24_23060 CP098603.1 Protein Homology CDS 80785 81777 . + 0 ID=cds-UUF00633.1;Parent=gene-NDY24_23060;Dbxref=NCBI_GP:UUF00633.1;Name=UUF00633.1;Ontology_term=GO:0009291;gbkey=CDS;gene=trbG;go_process=unidirectional conjugation|0009291||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019238157.1;locus_tag=NDY24_23060;product=P-type conjugative transfer protein TrbG;protein_id=UUF00633.1;transl_table=11 CP098603.1 Genbank gene 81867 82076 . - . ID=gene-NDY24_23065;Name=NDY24_23065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_23065 CP098603.1 GeneMarkS-2+ CDS 81867 82076 . - 0 ID=cds-UUF00566.1;Parent=gene-NDY24_23065;Dbxref=NCBI_GP:UUF00566.1;Name=UUF00566.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_23065;product=hypothetical protein;protein_id=UUF00566.1;transl_table=11 CP098603.1 Genbank gene 82167 83147 . + . ID=gene-NDY24_23070;Name=NDY24_23070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_23070 CP098603.1 Protein Homology CDS 82167 83147 . + 0 ID=cds-UUF00567.1;Parent=gene-NDY24_23070;Dbxref=NCBI_GP:UUF00567.1;Name=UUF00567.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015688.2;locus_tag=NDY24_23070;product=TrbI/VirB10 family protein;protein_id=UUF00567.1;transl_table=11 CP098603.1 Genbank gene 83269 83523 . + . ID=gene-NDY24_23075;Name=NDY24_23075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_23075 CP098603.1 Protein Homology CDS 83269 83523 . + 0 ID=cds-UUF00568.1;Parent=gene-NDY24_23075;Dbxref=NCBI_GP:UUF00568.1;Name=UUF00568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490070.1;locus_tag=NDY24_23075;product=hypothetical protein;protein_id=UUF00568.1;transl_table=11 CP098603.1 Genbank gene 83534 83773 . + . ID=gene-NDY24_23080;Name=NDY24_23080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_23080 CP098603.1 Protein Homology CDS 83534 83773 . + 0 ID=cds-UUF00569.1;Parent=gene-NDY24_23080;Dbxref=NCBI_GP:UUF00569.1;Name=UUF00569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575015.1;locus_tag=NDY24_23080;product=hypothetical protein;protein_id=UUF00569.1;transl_table=11 CP098603.1 Genbank gene 83887 84093 . + . ID=gene-NDY24_23085;Name=NDY24_23085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_23085 CP098603.1 Protein Homology CDS 83887 84093 . + 0 ID=cds-UUF00570.1;Parent=gene-NDY24_23085;Dbxref=NCBI_GP:UUF00570.1;Name=UUF00570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113417.1;locus_tag=NDY24_23085;product=hypothetical protein;protein_id=UUF00570.1;transl_table=11 CP098603.1 Genbank gene 84096 84923 . + . ID=gene-NDY24_23090;Name=NDY24_23090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_23090 CP098603.1 Protein Homology CDS 84096 84923 . + 0 ID=cds-UUF00571.1;Parent=gene-NDY24_23090;Dbxref=NCBI_GP:UUF00571.1;Name=UUF00571.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: protein motif:HMM:NF013878.2;locus_tag=NDY24_23090;product=DNA topoisomerase;protein_id=UUF00571.1;transl_table=11 CP098603.1 Genbank gene 84850 86271 . + . ID=gene-NDY24_23095;Name=NDY24_23095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_23095 CP098603.1 GeneMarkS-2+ CDS 84850 86271 . + 0 ID=cds-UUF00572.1;Parent=gene-NDY24_23095;Dbxref=NCBI_GP:UUF00572.1;Name=UUF00572.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_23095;product=DNA topoisomerase;protein_id=UUF00572.1;transl_table=11 CP098603.1 Genbank gene 86663 87247 . + . ID=gene-NDY24_23100;Name=NDY24_23100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_23100 CP098603.1 GeneMarkS-2+ CDS 86663 87247 . + 0 ID=cds-UUF00573.1;Parent=gene-NDY24_23100;Dbxref=NCBI_GP:UUF00573.1;Name=UUF00573.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_23100;product=hypothetical protein;protein_id=UUF00573.1;transl_table=11 CP098603.1 Genbank gene 87244 87531 . + . ID=gene-NDY24_23105;Name=NDY24_23105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_23105 CP098603.1 Protein Homology CDS 87244 87531 . + 0 ID=cds-UUF00574.1;Parent=gene-NDY24_23105;Dbxref=NCBI_GP:UUF00574.1;Name=UUF00574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005997470.1;locus_tag=NDY24_23105;product=hypothetical protein;protein_id=UUF00574.1;transl_table=11 CP098603.1 Genbank gene 87542 87949 . + . ID=gene-NDY24_23110;Name=NDY24_23110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_23110 CP098603.1 GeneMarkS-2+ CDS 87542 87949 . + 0 ID=cds-UUF00575.1;Parent=gene-NDY24_23110;Dbxref=NCBI_GP:UUF00575.1;Name=UUF00575.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_23110;product=hypothetical protein;protein_id=UUF00575.1;transl_table=11 CP098603.1 Genbank gene 87946 88290 . + . ID=gene-NDY24_23115;Name=NDY24_23115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_23115 CP098603.1 Protein Homology CDS 87946 88290 . + 0 ID=cds-UUF00576.1;Parent=gene-NDY24_23115;Dbxref=NCBI_GP:UUF00576.1;Name=UUF00576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017164030.1;locus_tag=NDY24_23115;product=hypothetical protein;protein_id=UUF00576.1;transl_table=11 CP098603.1 Genbank gene 88694 89053 . + . ID=gene-NDY24_23120;Name=NDY24_23120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_23120 CP098603.1 Protein Homology CDS 88694 89053 . + 0 ID=cds-UUF00577.1;Parent=gene-NDY24_23120;Dbxref=NCBI_GP:UUF00577.1;Name=UUF00577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005998073.1;locus_tag=NDY24_23120;product=hypothetical protein;protein_id=UUF00577.1;transl_table=11 CP098603.1 Genbank gene 89116 89355 . + . ID=gene-NDY24_23125;Name=NDY24_23125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_23125 CP098603.1 Protein Homology CDS 89116 89355 . + 0 ID=cds-UUF00578.1;Parent=gene-NDY24_23125;Dbxref=NCBI_GP:UUF00578.1;Name=UUF00578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163910.1;locus_tag=NDY24_23125;product=hypothetical protein;protein_id=UUF00578.1;transl_table=11 CP098603.1 Genbank gene 89352 89537 . + . ID=gene-NDY24_23130;Name=NDY24_23130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_23130 CP098603.1 GeneMarkS-2+ CDS 89352 89537 . + 0 ID=cds-UUF00579.1;Parent=gene-NDY24_23130;Dbxref=NCBI_GP:UUF00579.1;Name=UUF00579.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NDY24_23130;product=hypothetical protein;protein_id=UUF00579.1;transl_table=11 CP098603.1 Genbank gene 89883 90533 . + . ID=gene-NDY24_23135;Name=NDY24_23135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_23135 CP098603.1 Protein Homology CDS 89883 90533 . + 0 ID=cds-UUF00580.1;Parent=gene-NDY24_23135;Dbxref=NCBI_GP:UUF00580.1;Name=UUF00580.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113411.1;locus_tag=NDY24_23135;product=recombinase family protein;protein_id=UUF00580.1;transl_table=11 CP098603.1 Genbank gene 90563 91186 . - . ID=gene-NDY24_23140;Name=NDY24_23140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_23140 CP098603.1 Protein Homology CDS 90563 91186 . - 0 ID=cds-UUF00581.1;Parent=gene-NDY24_23140;Dbxref=NCBI_GP:UUF00581.1;Name=UUF00581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453000.1;locus_tag=NDY24_23140;product=type III secretion system effector protein;protein_id=UUF00581.1;transl_table=11 CP098603.1 Genbank pseudogene 91369 91674 . + . ID=gene-NDY24_23145;Name=NDY24_23145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_23145;pseudo=true CP098603.1 Protein Homology CDS 91369 91674 . + 0 ID=cds-NDY24_23145;Parent=gene-NDY24_23145;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009602860.1;locus_tag=NDY24_23145;product=recombinase family protein;pseudo=true;transl_table=11 CP098603.1 Genbank gene 92069 93232 . + . ID=gene-NDY24_23150;Name=NDY24_23150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NDY24_23150 CP098603.1 Protein Homology CDS 92069 93232 . + 0 ID=cds-UUF00634.1;Parent=gene-NDY24_23150;Dbxref=NCBI_GP:UUF00634.1;Name=UUF00634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155015.1;locus_tag=NDY24_23150;product=alpha/beta hydrolase;protein_id=UUF00634.1;transl_table=11 CP098603.1 Genbank pseudogene 93619 94084 . + . ID=gene-NDY24_22575;Name=NDY24_22575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NDY24_22575;pseudo=true CP098603.1 Protein Homology CDS 93619 94084 . + 0 ID=cds-NDY24_22575;Parent=gene-NDY24_22575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163772.1;locus_tag=NDY24_22575;product=hypothetical protein;pseudo=true;transl_table=11 ###