locus-tag class description XHV734_0001 PF11638 DnaA N-terminal domain XHV734_0001 PF08299 Bacterial dnaA protein helix-turn-helix XHV734_0001 PF00308 Bacterial dnaA protein XHV734_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain XHV734_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain XHV734_0002 PF02767 DNA polymerase III beta subunit, central domain XHV734_0004 PF02463 RecF/RecN/SMC N terminal domain XHV734_0005 PF01751 Toprim domain XHV734_0005 PF00204 DNA gyrase B XHV734_0005 PF00986 DNA gyrase B subunit, carboxyl terminus XHV734_0005 PF18053 DNA gyrase B subunit insert domain XHV734_0005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_0007 PF01435 Peptidase family M48 XHV734_0009 PF03544 Gram-negative bacterial TonB protein C-terminal XHV734_0010 PF01618 MotA/TolQ/ExbB proton channel family XHV734_0011 PF02472 Biopolymer transport protein ExbD/TolR XHV734_0012 PF02472 Biopolymer transport protein ExbD/TolR XHV734_0014 PF02472 Biopolymer transport protein ExbD/TolR XHV734_0016 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ XHV734_0018 PF13091 PLD-like domain XHV734_0018 PF13396 Phospholipase_D-nuclease N-terminal XHV734_0019 PF04055 Radical SAM superfamily XHV734_0021 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) XHV734_0025 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XHV734_0025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XHV734_0026 PF03572 Peptidase family S41 XHV734_0026 PF13180 PDZ domain XHV734_0027 PF01551 Peptidase family M23 XHV734_0029 PF04389 Peptidase family M28 XHV734_0031 PF00150 Cellulase (glycosyl hydrolase family 5) XHV734_0033 PF00150 Cellulase (glycosyl hydrolase family 5) XHV734_0034 PF00150 Cellulase (glycosyl hydrolase family 5) XHV734_0035 PF00150 Cellulase (glycosyl hydrolase family 5) XHV734_0036 PF08240 Alcohol dehydrogenase GroES-like domain XHV734_0036 PF00107 Zinc-binding dehydrogenase XHV734_0038 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster XHV734_0038 PF07992 Pyridine nucleotide-disulphide oxidoreductase XHV734_0039 PF01645 Conserved region in glutamate synthase XHV734_0039 PF00310 Glutamine amidotransferases class-II XHV734_0039 PF04898 Glutamate synthase central domain XHV734_0039 PF01493 GXGXG motif XHV734_0046 PF02525 Flavodoxin-like fold XHV734_0047 PF03466 LysR substrate binding domain XHV734_0047 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_0050 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain XHV734_0050 PF06165 Glycosyltransferase family 36 XHV734_0050 PF10091 Putative glucoamylase XHV734_0051 PF01804 Penicillin amidase XHV734_0055 PF01638 HxlR-like helix-turn-helix XHV734_0070 PF09369 Domain of unknown function (DUF1998) XHV734_0070 PF00271 Helicase conserved C-terminal domain XHV734_0070 PF00270 DEAD/DEAH box helicase XHV734_0073 PF03006 Haemolysin-III related XHV734_0083 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_0083 PF03466 LysR substrate binding domain XHV734_0087 PF02525 Flavodoxin-like fold XHV734_0088 PF09722 Protein of unknown function (DUF2384) XHV734_0088 PF01936 NYN domain XHV734_0091 PF01638 HxlR-like helix-turn-helix XHV734_0098 PF13683 Integrase core domain XHV734_0098 PF13276 HTH-like domain XHV734_0099 PF01527 Transposase XHV734_0105 PF16485 Protealysin propeptide XHV734_0105 PF02868 Thermolysin metallopeptidase, alpha-helical domain XHV734_0105 PF01447 Thermolysin metallopeptidase, catalytic domain XHV734_0107 PF09297 NADH pyrophosphatase zinc ribbon domain XHV734_0107 PF00293 NUDIX domain XHV734_0108 PF07859 alpha/beta hydrolase fold XHV734_0110 PF00085 Thioredoxin XHV734_0111 PF00083 Sugar (and other) transporter XHV734_0111 PF08946 Osmosensory transporter coiled coil XHV734_0120 PF07726 ATPase family associated with various cellular activities (AAA) XHV734_0120 PF17863 AAA lid domain XHV734_0129 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain XHV734_0130 PF00155 Aminotransferase class I and II XHV734_0131 PF07715 TonB-dependent Receptor Plug Domain XHV734_0131 PF00593 TonB dependent receptor XHV734_0133 PF07883 Cupin domain XHV734_0135 PF00171 Aldehyde dehydrogenase family XHV734_0136 PF08240 Alcohol dehydrogenase GroES-like domain XHV734_0136 PF00107 Zinc-binding dehydrogenase XHV734_0139 PF02735 Ku70/Ku80 beta-barrel domain XHV734_0140 PF01068 ATP dependent DNA ligase domain XHV734_0140 PF13298 DNA polymerase Ligase (LigD) XHV734_0140 PF04679 ATP dependent DNA ligase C terminal region XHV734_0141 PF01070 FMN-dependent dehydrogenase XHV734_0145 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family XHV734_0146 PF07730 Histidine kinase XHV734_0147 PF00072 Response regulator receiver domain XHV734_0147 PF00196 Bacterial regulatory proteins, luxR family XHV734_0151 PF18500 CadC C-terminal domain 1 XHV734_0151 PF00486 Transcriptional regulatory protein, C terminal XHV734_0153 PF12241 Trans-2-enoyl-CoA reductase catalytic region XHV734_0153 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase XHV734_0153 PF07055 Enoyl reductase FAD binding domain XHV734_0155 PF00294 pfkB family carbohydrate kinase XHV734_0156 PF07715 TonB-dependent Receptor Plug Domain XHV734_0156 PF00593 TonB dependent receptor XHV734_0158 PF01095 Pectinesterase XHV734_0165 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XHV734_0186 PF01527 Transposase XHV734_0187 PF13276 HTH-like domain XHV734_0187 PF13683 Integrase core domain XHV734_0202 PF11896 Domain of unknown function (DUF3416) XHV734_0202 PF00128 Alpha amylase, catalytic domain XHV734_0203 PF16657 Maltogenic Amylase, C-terminal domain XHV734_0203 PF00128 Alpha amylase, catalytic domain XHV734_0204 PF00128 Alpha amylase, catalytic domain XHV734_0204 PF02806 Alpha amylase, C-terminal all-beta domain XHV734_0204 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XHV734_0210 PF00248 Aldo/keto reductase family XHV734_0211 PF13472 GDSL-like Lipase/Acylhydrolase family XHV734_0212 PF00135 Carboxylesterase family XHV734_0213 PF13472 GDSL-like Lipase/Acylhydrolase family XHV734_0213 PF07859 alpha/beta hydrolase fold XHV734_0215 PF03480 Bacterial extracellular solute-binding protein, family 7 XHV734_0217 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component XHV734_0219 PF04616 Glycosyl hydrolases family 43 XHV734_0219 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain XHV734_0220 PF00356 Bacterial regulatory proteins, lacI family XHV734_0222 PF04962 KduI/IolB family XHV734_0225 PF00657 GDSL-like Lipase/Acylhydrolase XHV734_0229 PF00351 Biopterin-dependent aromatic amino acid hydroxylase XHV734_0230 PF01037 Lrp/AsnC ligand binding domain XHV734_0231 PF07715 TonB-dependent Receptor Plug Domain XHV734_0231 PF07660 Secretin and TonB N terminus short domain XHV734_0231 PF00593 TonB dependent receptor XHV734_0232 PF01734 Patatin-like phospholipase XHV734_0233 PF00005 ABC transporter XHV734_0236 PF00571 CBS domain XHV734_0236 PF00005 ABC transporter XHV734_0237 PF00528 Binding-protein-dependent transport system inner membrane component XHV734_0239 PF03781 Sulfatase-modifying factor enzyme 1 XHV734_0239 PF12867 DinB superfamily XHV734_0241 PF07804 HipA-like C-terminal domain XHV734_0241 PF13657 HipA N-terminal domain XHV734_0242 PF01381 Helix-turn-helix XHV734_0246 PF01883 Iron-sulfur cluster assembly protein XHV734_0246 PF10609 NUBPL iron-transfer P-loop NTPase XHV734_0250 PF13091 PLD-like domain XHV734_0251 PF03061 Thioesterase superfamily XHV734_0255 PF01161 Phosphatidylethanolamine-binding protein XHV734_0258 PF02673 Bacitracin resistance protein BacA XHV734_0259 PF00120 Glutamine synthetase, catalytic domain XHV734_0259 PF03951 Glutamine synthetase, beta-Grasp domain XHV734_0260 PF00543 Nitrogen regulatory protein P-II XHV734_0261 PF00909 Ammonium Transporter Family XHV734_0262 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_0262 PF00512 His Kinase A (phospho-acceptor) domain XHV734_0262 PF00989 PAS fold XHV734_0263 PF02954 Bacterial regulatory protein, Fis family XHV734_0263 PF00158 Sigma-54 interaction domain XHV734_0263 PF00072 Response regulator receiver domain XHV734_0264 PF00080 Copper/zinc superoxide dismutase (SODC) XHV734_0266 PF00080 Copper/zinc superoxide dismutase (SODC) XHV734_0268 PF02803 Thiolase, C-terminal domain XHV734_0268 PF00108 Thiolase, N-terminal domain XHV734_0277 PF00581 Rhodanese-like domain XHV734_0278 PF02556 Preprotein translocase subunit SecB XHV734_0279 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus XHV734_0279 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus XHV734_0281 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XHV734_0281 PF00205 Thiamine pyrophosphate enzyme, central domain XHV734_0281 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XHV734_0282 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_0282 PF00512 His Kinase A (phospho-acceptor) domain XHV734_0283 PF02954 Bacterial regulatory protein, Fis family XHV734_0283 PF00072 Response regulator receiver domain XHV734_0283 PF00158 Sigma-54 interaction domain XHV734_0286 PF07690 Major Facilitator Superfamily XHV734_0287 PF00588 SpoU rRNA Methylase family XHV734_0291 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XHV734_0291 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XHV734_0292 PF02661 Fic/DOC family XHV734_0292 PF13784 Fic/DOC family N-terminal XHV734_0293 PF00561 alpha/beta hydrolase fold XHV734_0294 PF03692 Putative zinc- or iron-chelating domain XHV734_0296 PF00501 AMP-binding enzyme XHV734_0300 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family XHV734_0304 PF07478 D-ala D-ala ligase C-terminus XHV734_0304 PF01820 D-ala D-ala ligase N-terminus XHV734_0306 PF03109 ABC1 family XHV734_0307 PF00849 RNA pseudouridylate synthase XHV734_0310 PF00472 RF-1 domain XHV734_0313 PF01112 Asparaginase XHV734_0314 PF01432 Peptidase family M3 XHV734_0316 PF12706 Beta-lactamase superfamily domain XHV734_0318 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_0318 PF03466 LysR substrate binding domain XHV734_0319 PF01274 Malate synthase XHV734_0320 PF00463 Isocitrate lyase family XHV734_0321 PF00990 Diguanylate cyclase, GGDEF domain XHV734_0325 PF00326 Prolyl oligopeptidase family XHV734_0326 PF02785 Biotin carboxylase C-terminal domain XHV734_0326 PF00289 Biotin carboxylase, N-terminal domain XHV734_0326 PF00364 Biotin-requiring enzyme XHV734_0326 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XHV734_0326 PF18140 Propionyl-coenzyme A carboxylase BT domain XHV734_0327 PF01039 Carboxyl transferase domain XHV734_0328 PF02770 Acyl-CoA dehydrogenase, middle domain XHV734_0328 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XHV734_0328 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XHV734_0336 PF13442 Cytochrome C oxidase, cbb3-type, subunit III XHV734_0339 PF02492 CobW/HypB/UreG, nucleotide-binding domain XHV734_0339 PF07683 Cobalamin synthesis protein cobW C-terminal domain XHV734_0345 PF03969 AFG1-like ATPase XHV734_0348 PF01047 MarR family XHV734_0349 PF02566 OsmC-like protein XHV734_0350 PF12697 Alpha/beta hydrolase family XHV734_0354 PF00248 Aldo/keto reductase family XHV734_0355 PF00107 Zinc-binding dehydrogenase XHV734_0355 PF16884 N-terminal domain of oxidoreductase XHV734_0356 PF00248 Aldo/keto reductase family XHV734_0358 PF00849 RNA pseudouridylate synthase XHV734_0359 PF00593 TonB dependent receptor XHV734_0362 PF08482 ATP-dependent helicase C-terminal XHV734_0362 PF04408 Helicase associated domain (HA2) XHV734_0362 PF00270 DEAD/DEAH box helicase XHV734_0362 PF00271 Helicase conserved C-terminal domain XHV734_0363 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XHV734_0363 PF02203 Tar ligand binding domain homologue XHV734_0363 PF00672 HAMP domain XHV734_0365 PF07308 Protein of unknown function (DUF1456) XHV734_0366 PF00576 HIUase/Transthyretin family XHV734_0367 PF13454 FAD-NAD(P)-binding XHV734_0368 PF09349 OHCU decarboxylase XHV734_0368 PF01014 Uricase XHV734_0371 PF00266 Aminotransferase class-V XHV734_0372 PF07687 Peptidase dimerisation domain XHV734_0372 PF01546 Peptidase family M20/M25/M40 XHV734_0374 PF03466 LysR substrate binding domain XHV734_0374 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_0375 PF07690 Major Facilitator Superfamily XHV734_0376 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_0376 PF03466 LysR substrate binding domain XHV734_0377 PF00561 alpha/beta hydrolase fold XHV734_0384 PF00145 C-5 cytosine-specific DNA methylase XHV734_0392 PF01425 Amidase XHV734_0394 PF01156 Inosine-uridine preferring nucleoside hydrolase XHV734_0397 PF00860 Permease family XHV734_0398 PF00111 2Fe-2S iron-sulfur cluster binding domain XHV734_0399 PF00355 Rieske [2Fe-2S] domain XHV734_0400 PF03466 LysR substrate binding domain XHV734_0400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_0401 PF01026 TatD related DNase XHV734_0404 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_0404 PF03466 LysR substrate binding domain XHV734_0405 PF07690 Major Facilitator Superfamily XHV734_0410 PF02146 Sir2 family XHV734_0411 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XHV734_0412 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase XHV734_0412 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XHV734_0414 PF00551 Formyl transferase XHV734_0416 PF00933 Glycosyl hydrolase family 3 N terminal domain XHV734_0419 PF02219 Methylenetetrahydrofolate reductase XHV734_0420 PF02677 Epoxyqueuosine reductase QueH XHV734_0421 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_0421 PF03466 LysR substrate binding domain XHV734_0422 PF03358 NADPH-dependent FMN reductase XHV734_0424 PF08267 Cobalamin-independent synthase, N-terminal domain XHV734_0424 PF01717 Cobalamin-independent synthase, Catalytic domain XHV734_0428 PF05368 NmrA-like family XHV734_0430 PF01638 HxlR-like helix-turn-helix XHV734_0433 PF01527 Transposase XHV734_0435 PF00156 Phosphoribosyl transferase domain XHV734_0437 PF01527 Transposase XHV734_0438 PF13276 HTH-like domain XHV734_0438 PF13683 Integrase core domain XHV734_0444 PF01527 Transposase XHV734_0446 PF13276 HTH-like domain XHV734_0446 PF13683 Integrase core domain XHV734_0447 PF01527 Transposase XHV734_0455 PF13495 Phage integrase, N-terminal SAM-like domain XHV734_0455 PF00589 Phage integrase family XHV734_0458 PF00920 Dehydratase family XHV734_0459 PF03692 Putative zinc- or iron-chelating domain XHV734_0460 PF00132 Bacterial transferase hexapeptide (six repeats) XHV734_0462 PF07690 Major Facilitator Superfamily XHV734_0463 PF01966 HD domain XHV734_0463 PF11871 Domain of unknown function (DUF3391) XHV734_0467 PF00171 Aldehyde dehydrogenase family XHV734_0470 PF01494 FAD binding domain XHV734_0472 PF01609 Transposase DDE domain XHV734_0472 PF05598 Transposase domain (DUF772) XHV734_0473 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XHV734_0473 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XHV734_0474 PF00230 Major intrinsic protein XHV734_0475 PF01266 FAD dependent oxidoreductase XHV734_0475 PF16901 C-terminal domain of alpha-glycerophosphate oxidase XHV734_0476 PF00455 DeoR C terminal sensor domain XHV734_0476 PF08220 DeoR-like helix-turn-helix domain XHV734_0477 PF00111 2Fe-2S iron-sulfur cluster binding domain XHV734_0477 PF00970 Oxidoreductase FAD-binding domain XHV734_0479 PF00355 Rieske [2Fe-2S] domain XHV734_0480 PF01144 Coenzyme A transferase XHV734_0481 PF01144 Coenzyme A transferase XHV734_0482 PF02803 Thiolase, C-terminal domain XHV734_0482 PF00108 Thiolase, N-terminal domain XHV734_0483 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal XHV734_0483 PF00775 Dioxygenase XHV734_0485 PF00206 Lyase XHV734_0485 PF10397 Adenylosuccinate lyase C-terminus XHV734_0486 PF12146 Serine aminopeptidase, S33 XHV734_0487 PF02627 Carboxymuconolactone decarboxylase family XHV734_0489 PF09339 IclR helix-turn-helix domain XHV734_0489 PF01614 Bacterial transcriptional regulator XHV734_0492 PF07859 alpha/beta hydrolase fold XHV734_0493 PF10677 Protein of unknown function (DUF2490) XHV734_0495 PF13932 GidA associated domain XHV734_0495 PF01134 Glucose inhibited division protein A XHV734_0497 PF00291 Pyridoxal-phosphate dependent enzyme XHV734_0501 PF13649 Methyltransferase domain XHV734_0503 PF12697 Alpha/beta hydrolase family XHV734_0505 PF00155 Aminotransferase class I and II XHV734_0506 PF06968 Biotin and Thiamin Synthesis associated domain XHV734_0506 PF04055 Radical SAM superfamily XHV734_0508 PF01040 UbiA prenyltransferase family XHV734_0513 PF00589 Phage integrase family XHV734_0513 PF13356 Arm DNA-binding domain XHV734_0518 PF05649 Peptidase family M13 XHV734_0518 PF01431 Peptidase family M13 XHV734_0524 PF12795 Mechanosensitive ion channel porin domain XHV734_0524 PF00924 Mechanosensitive ion channel XHV734_0524 PF12794 Mechanosensitive ion channel inner membrane domain 1 XHV734_0525 PF00884 Sulfatase XHV734_0526 PF03109 ABC1 family XHV734_0527 PF05661 Protein of unknown function (DUF808) XHV734_0529 PF02638 Glycosyl hydrolase-like 10 XHV734_0530 PF00990 Diguanylate cyclase, GGDEF domain XHV734_0531 PF00534 Glycosyl transferases group 1 XHV734_0531 PF08323 Starch synthase catalytic domain XHV734_0532 PF00128 Alpha amylase, catalytic domain XHV734_0532 PF02806 Alpha amylase, C-terminal all-beta domain XHV734_0532 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XHV734_0533 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XHV734_0533 PF11941 Domain of unknown function (DUF3459) XHV734_0533 PF00128 Alpha amylase, catalytic domain XHV734_0534 PF02446 4-alpha-glucanotransferase XHV734_0535 PF00128 Alpha amylase, catalytic domain XHV734_0537 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XHV734_0537 PF00128 Alpha amylase, catalytic domain XHV734_0538 PF13460 NAD(P)H-binding XHV734_0544 PF06903 VirK protein XHV734_0545 PF06903 VirK protein XHV734_0546 PF02321 Outer membrane efflux protein XHV734_0547 PF00440 Bacterial regulatory proteins, tetR family XHV734_0549 PF00873 AcrB/AcrD/AcrF family XHV734_0551 PF00270 DEAD/DEAH box helicase XHV734_0551 PF00271 Helicase conserved C-terminal domain XHV734_0554 PF02817 e3 binding domain XHV734_0554 PF00364 Biotin-requiring enzyme XHV734_0554 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XHV734_0556 PF02780 Transketolase, C-terminal domain XHV734_0556 PF02779 Transketolase, pyrimidine binding domain XHV734_0557 PF00676 Dehydrogenase E1 component XHV734_0559 PF03301 Tryptophan 2,3-dioxygenase XHV734_0560 PF00854 POT family XHV734_0562 PF01047 MarR family XHV734_0563 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XHV734_0565 PF04480 Protein of unknown function (DUF559) XHV734_0566 PF04209 homogentisate 1,2-dioxygenase XHV734_0569 PF03334 Na+/H+ antiporter subunit XHV734_0570 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) XHV734_0572 PF00361 Proton-conducting membrane transporter XHV734_0573 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L XHV734_0574 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus XHV734_0574 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter XHV734_0574 PF00361 Proton-conducting membrane transporter XHV734_0574 PF13244 Domain of unknown function (DUF4040) XHV734_0577 PF01447 Thermolysin metallopeptidase, catalytic domain XHV734_0577 PF02868 Thermolysin metallopeptidase, alpha-helical domain XHV734_0577 PF07504 Fungalysin/Thermolysin Propeptide Motif XHV734_0577 PF01483 Proprotein convertase P-domain XHV734_0589 PF01259 SAICAR synthetase XHV734_0590 PF05099 Tellurite resistance protein TerB XHV734_0590 PF00226 DnaJ domain XHV734_0592 PF00834 Ribulose-phosphate 3 epimerase family XHV734_0594 PF00781 Diacylglycerol kinase catalytic domain XHV734_0595 PF04715 Anthranilate synthase component I, N terminal region XHV734_0595 PF00425 chorismate binding enzyme XHV734_0597 PF05819 NolX protein XHV734_0600 PF13936 Helix-turn-helix domain XHV734_0600 PF00665 Integrase core domain XHV734_0602 PF01609 Transposase DDE domain XHV734_0602 PF05598 Transposase domain (DUF772) XHV734_0603 PF00561 alpha/beta hydrolase fold XHV734_0607 PF13683 Integrase core domain XHV734_0607 PF13276 HTH-like domain XHV734_0608 PF01527 Transposase XHV734_0616 PF01313 Bacterial export proteins, family 3 XHV734_0617 PF00813 FliP family XHV734_0620 PF00771 FHIPEP family XHV734_0621 PF01312 FlhB HrpN YscU SpaS Family XHV734_0624 PF01514 Secretory protein of YscJ/FliF family XHV734_0628 PF02874 ATP synthase alpha/beta family, beta-barrel domain XHV734_0628 PF18269 T3SS EscN ATPase C-terminal domain XHV734_0628 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XHV734_0631 PF03958 Bacterial type II/III secretion system short domain XHV734_0631 PF00263 Bacterial type II and III secretion system protein XHV734_0633 PF01464 Transglycosylase SLT domain XHV734_0637 PF02203 Tar ligand binding domain homologue XHV734_0637 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XHV734_0637 PF00672 HAMP domain XHV734_0638 PF00117 Glutamine amidotransferase class-I XHV734_0640 PF02885 Glycosyl transferase family, helical bundle domain XHV734_0640 PF00591 Glycosyl transferase family, a/b domain XHV734_0642 PF00218 Indole-3-glycerol phosphate synthase XHV734_0645 PF00325 Bacterial regulatory proteins, crp family XHV734_0645 PF00027 Cyclic nucleotide-binding domain XHV734_0646 PF02675 S-adenosylmethionine decarboxylase XHV734_0647 PF00893 Small Multidrug Resistance protein XHV734_0648 PF03232 Ubiquinone biosynthesis protein COQ7 XHV734_0649 PF00572 Ribosomal protein L13 XHV734_0650 PF00380 Ribosomal protein S9/S16 XHV734_0651 PF00293 NUDIX domain XHV734_0654 PF00210 Ferritin-like domain XHV734_0655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_0655 PF00072 Response regulator receiver domain XHV734_0655 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) XHV734_0655 PF00512 His Kinase A (phospho-acceptor) domain XHV734_0655 PF01627 Hpt domain XHV734_0655 PF00672 HAMP domain XHV734_0656 PF00072 Response regulator receiver domain XHV734_0656 PF00486 Transcriptional regulatory protein, C terminal XHV734_0660 PF01521 Iron-sulphur cluster biosynthesis XHV734_0662 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain XHV734_0662 PF00293 NUDIX domain XHV734_0662 PF09297 NADH pyrophosphatase zinc ribbon domain XHV734_0663 PF03186 CobD/Cbib protein XHV734_0663 PF17113 Regulatory signalling modulator protein AmpE XHV734_0668 PF07690 Major Facilitator Superfamily XHV734_0669 PF12805 FUSC-like inner membrane protein yccS XHV734_0670 PF02843 Phosphoribosylglycinamide synthetase, C domain XHV734_0670 PF02844 Phosphoribosylglycinamide synthetase, N domain XHV734_0670 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain XHV734_0671 PF01808 AICARFT/IMPCHase bienzyme XHV734_0671 PF02142 MGS-like domain XHV734_0675 PF02954 Bacterial regulatory protein, Fis family XHV734_0677 PF05598 Transposase domain (DUF772) XHV734_0677 PF01609 Transposase DDE domain XHV734_0678 PF00818 Ice nucleation protein repeat XHV734_0678 PF00818 Ice nucleation protein repeat XHV734_0679 PF02954 Bacterial regulatory protein, Fis family XHV734_0681 PF01381 Helix-turn-helix XHV734_0686 PF02785 Biotin carboxylase C-terminal domain XHV734_0686 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XHV734_0686 PF00289 Biotin carboxylase, N-terminal domain XHV734_0688 PF00364 Biotin-requiring enzyme XHV734_0689 PF01220 Dehydroquinase class II XHV734_0691 PF02683 Cytochrome C biogenesis protein transmembrane region XHV734_0691 PF11412 Disulphide bond corrector protein DsbC XHV734_0692 PF03091 CutA1 divalent ion tolerance protein XHV734_0694 PF04231 Endonuclease I XHV734_0696 PF00166 Chaperonin 10 Kd subunit XHV734_0697 PF00118 TCP-1/cpn60 chaperonin family XHV734_0698 PF01738 Dienelactone hydrolase family XHV734_0701 PF07715 TonB-dependent Receptor Plug Domain XHV734_0701 PF00593 TonB dependent receptor XHV734_0705 PF07804 HipA-like C-terminal domain XHV734_0707 PF00793 DAHP synthetase I family XHV734_0708 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain XHV734_0708 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain XHV734_0714 PF04773 FecR protein XHV734_0714 PF16220 Domain of unknown function (DUF4880) XHV734_0715 PF07715 TonB-dependent Receptor Plug Domain XHV734_0715 PF07660 Secretin and TonB N terminus short domain XHV734_0715 PF00593 TonB dependent receptor XHV734_0720 PF03710 Glutamate-ammonia ligase adenylyltransferase XHV734_0720 PF08335 GlnD PII-uridylyltransferase XHV734_0721 PF02592 Putative vitamin uptake transporter XHV734_0725 PF00881 Nitroreductase family XHV734_0726 PF04264 YceI-like domain XHV734_0730 PF16957 Malonate decarboxylase, alpha subunit, transporter XHV734_0731 PF06857 Malonate decarboxylase delta subunit (MdcD) XHV734_0732 PF01039 Carboxyl transferase domain XHV734_0734 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG XHV734_0735 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase XHV734_0736 PF16197 Ketoacyl-synthetase C-terminal extension XHV734_0736 PF00698 Acyl transferase domain XHV734_0736 PF00109 Beta-ketoacyl synthase, N-terminal domain XHV734_0736 PF08659 KR domain XHV734_0736 PF02801 Beta-ketoacyl synthase, C-terminal domain XHV734_0736 PF00550 Phosphopantetheine attachment site XHV734_0738 PF00392 Bacterial regulatory proteins, gntR family XHV734_0738 PF07729 FCD domain XHV734_0746 PF07745 Glycosyl hydrolase family 53 XHV734_0747 PF17831 Pyruvate dehydrogenase E1 component middle domain XHV734_0747 PF00456 Transketolase, thiamine diphosphate binding domain XHV734_0751 PF00145 C-5 cytosine-specific DNA methylase XHV734_0753 PF03852 DNA mismatch endonuclease Vsr XHV734_0762 PF00580 UvrD/REP helicase N-terminal domain XHV734_0762 PF13361 UvrD-like helicase C-terminal domain XHV734_0780 PF07715 TonB-dependent Receptor Plug Domain XHV734_0780 PF00593 TonB dependent receptor XHV734_0782 PF00326 Prolyl oligopeptidase family XHV734_0789 PF13409 Glutathione S-transferase, N-terminal domain XHV734_0796 PF00326 Prolyl oligopeptidase family XHV734_0796 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region XHV734_0797 PF07759 Protein of unknown function (DUF1615) XHV734_0799 PF00990 Diguanylate cyclase, GGDEF domain XHV734_0805 PF00892 EamA-like transporter family XHV734_0806 PF00497 Bacterial extracellular solute-binding proteins, family 3 XHV734_0808 PF03330 Lytic transglycolase XHV734_0810 PF00324 Amino acid permease XHV734_0812 PF01544 CorA-like Mg2+ transporter protein XHV734_0814 PF04616 Glycosyl hydrolases family 43 XHV734_0815 PF01204 Trehalase XHV734_0818 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain XHV734_0818 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain XHV734_0822 PF00544 Pectate lyase XHV734_0824 PF03707 Bacterial signalling protein N terminal repeat XHV734_0824 PF00990 Diguanylate cyclase, GGDEF domain XHV734_0824 PF00563 EAL domain XHV734_0825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XHV734_0825 PF00672 HAMP domain XHV734_0825 PF02203 Tar ligand binding domain homologue XHV734_0826 PF00553 Cellulose binding domain XHV734_0826 PF00150 Cellulase (glycosyl hydrolase family 5) XHV734_0827 PF01740 STAS domain XHV734_0827 PF00916 Sulfate permease family XHV734_0828 PF00990 Diguanylate cyclase, GGDEF domain XHV734_0831 PF13632 Glycosyl transferase family group 2 XHV734_0835 PF06580 Histidine kinase XHV734_0835 PF07694 5TMR of 5TMR-LYT XHV734_0836 PF04397 LytTr DNA-binding domain XHV734_0836 PF00072 Response regulator receiver domain XHV734_0838 PF03900 Porphobilinogen deaminase, C-terminal domain XHV734_0838 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain XHV734_0844 PF00326 Prolyl oligopeptidase family XHV734_0844 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain XHV734_0853 PF01609 Transposase DDE domain XHV734_0853 PF05598 Transposase domain (DUF772) XHV734_0854 PF00155 Aminotransferase class I and II XHV734_0855 PF00326 Prolyl oligopeptidase family XHV734_0855 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain XHV734_0856 PF04304 Protein of unknown function (DUF454) XHV734_0858 PF01678 Diaminopimelate epimerase XHV734_0860 PF00589 Phage integrase family XHV734_0860 PF02899 Phage integrase, N-terminal SAM-like domain XHV734_0861 PF00227 Proteasome subunit XHV734_0862 PF07724 AAA domain (Cdc48 subfamily) XHV734_0862 PF00004 ATPase family associated with various cellular activities (AAA) XHV734_0862 PF10431 C-terminal, D2-small domain, of ClpB protein XHV734_0863 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain XHV734_0863 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain XHV734_0865 PF13673 Acetyltransferase (GNAT) domain XHV734_0866 PF13533 Biotin-lipoyl like XHV734_0869 PF01209 ubiE/COQ5 methyltransferase family XHV734_0870 PF03707 Bacterial signalling protein N terminal repeat XHV734_0870 PF00990 Diguanylate cyclase, GGDEF domain XHV734_0870 PF00563 EAL domain XHV734_0871 PF11838 ERAP1-like C-terminal domain XHV734_0871 PF01433 Peptidase family M1 domain XHV734_0875 PF13360 PQQ-like domain XHV734_0876 PF00497 Bacterial extracellular solute-binding proteins, family 3 XHV734_0880 PF08240 Alcohol dehydrogenase GroES-like domain XHV734_0880 PF00107 Zinc-binding dehydrogenase XHV734_0882 PF02954 Bacterial regulatory protein, Fis family XHV734_0882 PF01590 GAF domain XHV734_0882 PF00158 Sigma-54 interaction domain XHV734_0883 PF00294 pfkB family carbohydrate kinase XHV734_0885 PF04085 rod shape-determining protein MreC XHV734_0886 PF04093 rod shape-determining protein MreD XHV734_0887 PF00905 Penicillin binding protein transpeptidase domain XHV734_0887 PF03717 Penicillin-binding Protein dimerisation domain XHV734_0888 PF01098 Cell cycle protein XHV734_0889 PF00295 Glycosyl hydrolases family 28 XHV734_0890 PF13406 Transglycosylase SLT domain XHV734_0891 PF03330 Lytic transglycolase XHV734_0891 PF05036 Sporulation related domain XHV734_0893 PF00768 D-alanyl-D-alanine carboxypeptidase XHV734_0893 PF07943 Penicillin-binding protein 5, C-terminal domain XHV734_0895 PF04359 Protein of unknown function (DUF493) XHV734_0896 PF03099 Biotin/lipoate A/B protein ligase family XHV734_0897 PF04055 Radical SAM superfamily XHV734_0897 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family XHV734_0899 PF17804 Tail specific protease N-terminal domain XHV734_0899 PF00595 PDZ domain XHV734_0899 PF03572 Peptidase family S41 XHV734_0899 PF11818 C-terminal domain of tail specific protease (DUF3340) XHV734_0902 PF00293 NUDIX domain XHV734_0902 PF01467 Cytidylyltransferase-like XHV734_0909 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XHV734_0909 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain XHV734_0910 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XHV734_0910 PF02894 Oxidoreductase family, C-terminal alpha/beta domain XHV734_0911 PF04972 BON domain XHV734_0912 PF00360 Phytochrome region XHV734_0912 PF08446 PAS fold XHV734_0912 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_0912 PF01590 GAF domain XHV734_0912 PF00512 His Kinase A (phospho-acceptor) domain XHV734_0913 PF00072 Response regulator receiver domain XHV734_0914 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_0914 PF00512 His Kinase A (phospho-acceptor) domain XHV734_0915 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) XHV734_0923 PF03958 Bacterial type II/III secretion system short domain XHV734_0923 PF00263 Bacterial type II and III secretion system protein XHV734_0924 PF00437 Type II/IV secretion system protein XHV734_0925 PF00482 Type II secretion system (T2SS), protein F XHV734_0926 PF08334 Type II secretion system (T2SS), protein G XHV734_0926 PF07963 Prokaryotic N-terminal methylation motif XHV734_0927 PF12019 Type II transport protein GspH XHV734_0927 PF07963 Prokaryotic N-terminal methylation motif XHV734_0928 PF07963 Prokaryotic N-terminal methylation motif XHV734_0928 PF02501 Type II secretion system (T2SS), protein I XHV734_0929 PF11612 Type II secretion system (T2SS), protein J XHV734_0929 PF07963 Prokaryotic N-terminal methylation motif XHV734_0930 PF03934 Type II secretion system (T2SS), protein K XHV734_0938 PF02837 Glycosyl hydrolases family 2, sugar binding domain XHV734_0938 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 XHV734_0938 PF02836 Glycosyl hydrolases family 2, TIM barrel domain XHV734_0938 PF00703 Glycosyl hydrolases family 2 XHV734_0938 PF16355 Domain of unknown function (DUF4982) XHV734_0941 PF00392 Bacterial regulatory proteins, gntR family XHV734_0941 PF07702 UTRA domain XHV734_0942 PF07690 Major Facilitator Superfamily XHV734_0943 PF00356 Bacterial regulatory proteins, lacI family XHV734_0944 PF01380 SIS domain XHV734_0945 PF01979 Amidohydrolase family XHV734_0947 PF01966 HD domain XHV734_0947 PF01743 Poly A polymerase head domain XHV734_0947 PF12627 Probable RNA and SrmB- binding site of polymerase A XHV734_0950 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain XHV734_0950 PF01464 Transglycosylase SLT domain XHV734_0951 PF07715 TonB-dependent Receptor Plug Domain XHV734_0951 PF00593 TonB dependent receptor XHV734_0953 PF00732 GMC oxidoreductase XHV734_0953 PF05199 GMC oxidoreductase XHV734_0954 PF00171 Aldehyde dehydrogenase family XHV734_0955 PF02028 BCCT, betaine/carnitine/choline family transporter XHV734_0957 PF01323 DSBA-like thioredoxin domain XHV734_0959 PF00034 Cytochrome c XHV734_0960 PF01926 50S ribosome-binding GTPase XHV734_0961 PF04107 Glutamate-cysteine ligase family 2(GCS2) XHV734_0962 PF00512 His Kinase A (phospho-acceptor) domain XHV734_0962 PF00672 HAMP domain XHV734_0962 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_0963 PF00486 Transcriptional regulatory protein, C terminal XHV734_0963 PF00072 Response regulator receiver domain XHV734_0966 PF13581 Histidine kinase-like ATPase domain XHV734_0966 PF13426 PAS domain XHV734_0966 PF07536 HWE histidine kinase XHV734_0967 PF02583 Metal-sensitive transcriptional repressor XHV734_0968 PF00107 Zinc-binding dehydrogenase XHV734_0968 PF08240 Alcohol dehydrogenase GroES-like domain XHV734_0969 PF04828 Glutathione-dependent formaldehyde-activating enzyme XHV734_0970 PF00756 Putative esterase XHV734_0972 PF00155 Aminotransferase class I and II XHV734_0972 PF00392 Bacterial regulatory proteins, gntR family XHV734_0973 PF02567 Phenazine biosynthesis-like protein XHV734_0974 PF00892 EamA-like transporter family XHV734_0986 PF01979 Amidohydrolase family XHV734_0987 PF01979 Amidohydrolase family XHV734_0990 PF00462 Glutaredoxin XHV734_0992 PF01522 Polysaccharide deacetylase XHV734_0993 PF07715 TonB-dependent Receptor Plug Domain XHV734_0993 PF00593 TonB dependent receptor XHV734_0998 PF00155 Aminotransferase class I and II XHV734_0999 PF00005 ABC transporter XHV734_0999 PF03412 Peptidase C39 family XHV734_0999 PF00664 ABC transporter transmembrane region XHV734_1010 PF03193 RsgA GTPase XHV734_1015 PF00128 Alpha amylase, catalytic domain XHV734_1018 PF00356 Bacterial regulatory proteins, lacI family XHV734_1019 PF00106 short chain dehydrogenase XHV734_1020 PF03600 Citrate transporter XHV734_1022 PF00486 Transcriptional regulatory protein, C terminal XHV734_1022 PF00072 Response regulator receiver domain XHV734_1023 PF08521 Two-component sensor kinase N-terminal XHV734_1023 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_1023 PF00512 His Kinase A (phospho-acceptor) domain XHV734_1026 PF00072 Response regulator receiver domain XHV734_1026 PF00196 Bacterial regulatory proteins, luxR family XHV734_1027 PF07715 TonB-dependent Receptor Plug Domain XHV734_1027 PF00593 TonB dependent receptor XHV734_1029 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_1029 PF00512 His Kinase A (phospho-acceptor) domain XHV734_1031 PF00375 Sodium:dicarboxylate symporter family XHV734_1033 PF01515 Phosphate acetyl/butaryl transferase XHV734_1033 PF03949 Malic enzyme, NAD binding domain XHV734_1033 PF00390 Malic enzyme, N-terminal domain XHV734_1039 PF03279 Bacterial lipid A biosynthesis acyltransferase XHV734_1040 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) XHV734_1041 PF02321 Outer membrane efflux protein XHV734_1044 PF00990 Diguanylate cyclase, GGDEF domain XHV734_1045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_1046 PF00330 Aconitase family (aconitate hydratase) XHV734_1047 PF00694 Aconitase C-terminal domain XHV734_1048 PF08241 Methyltransferase domain XHV734_1049 PF00180 Isocitrate/isopropylmalate dehydrogenase XHV734_1050 PF08502 LeuA allosteric (dimerisation) domain XHV734_1050 PF00682 HMGL-like XHV734_1051 PF00291 Pyridoxal-phosphate dependent enzyme XHV734_1053 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XHV734_1053 PF00205 Thiamine pyrophosphate enzyme, central domain XHV734_1053 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XHV734_1054 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain XHV734_1054 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain XHV734_1056 PF02203 Tar ligand binding domain homologue XHV734_1056 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XHV734_1056 PF00672 HAMP domain XHV734_1057 PF00326 Prolyl oligopeptidase family XHV734_1057 PF07676 WD40-like Beta Propeller Repeat XHV734_1060 PF01964 Radical SAM ThiC family XHV734_1060 PF13667 ThiC-associated domain XHV734_1061 PF00486 Transcriptional regulatory protein, C terminal XHV734_1061 PF18500 CadC C-terminal domain 1 XHV734_1062 PF12833 Helix-turn-helix domain XHV734_1063 PF00593 TonB dependent receptor XHV734_1063 PF07715 TonB-dependent Receptor Plug Domain XHV734_1065 PF00719 Inorganic pyrophosphatase XHV734_1068 PF03030 Inorganic H+ pyrophosphatase XHV734_1073 PF00365 Phosphofructokinase XHV734_1075 PF01225 Mur ligase family, catalytic domain XHV734_1075 PF08245 Mur ligase middle domain XHV734_1075 PF02875 Mur ligase family, glutamate ligase domain XHV734_1077 PF01062 Bestrophin, RFP-TM, chloride channel XHV734_1080 PF01569 PAP2 superfamily XHV734_1086 PF00520 Ion transport protein XHV734_1086 PF00027 Cyclic nucleotide-binding domain XHV734_1087 PF00202 Aminotransferase class-III XHV734_1090 PF01593 Flavin containing amine oxidoreductase XHV734_1091 PF00034 Cytochrome c XHV734_1091 PF13442 Cytochrome C oxidase, cbb3-type, subunit III XHV734_1093 PF00155 Aminotransferase class I and II XHV734_1094 PF00127 Copper binding proteins, plastocyanin/azurin family XHV734_1095 PF00196 Bacterial regulatory proteins, luxR family XHV734_1095 PF17874 MalT-like TPR region XHV734_1096 PF00202 Aminotransferase class-III XHV734_1100 PF02581 Thiamine monophosphate synthase XHV734_1101 PF00301 Rubredoxin XHV734_1102 PF13369 Transglutaminase-like superfamily XHV734_1104 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) XHV734_1106 PF01812 5-formyltetrahydrofolate cyclo-ligase family XHV734_1108 PF05164 Cell division protein ZapA XHV734_1110 PF03695 Uncharacterised protein family (UPF0149) XHV734_1111 PF00557 Metallopeptidase family M24 XHV734_1111 PF05195 Aminopeptidase P, N-terminal domain XHV734_1112 PF00557 Metallopeptidase family M24 XHV734_1115 PF06969 HemN C-terminal domain XHV734_1115 PF04055 Radical SAM superfamily XHV734_1116 PF01725 Ham1 family XHV734_1117 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XHV734_1118 PF03725 3' exoribonuclease family, domain 2 XHV734_1118 PF01138 3' exoribonuclease family, domain 1 XHV734_1119 PF08340 Domain of unknown function (DUF1732) XHV734_1119 PF03755 YicC-like family, N-terminal region XHV734_1120 PF00625 Guanylate kinase XHV734_1121 PF01192 RNA polymerase Rpb6 XHV734_1123 PF04607 Region found in RelA / SpoT proteins XHV734_1123 PF13291 ACT domain XHV734_1123 PF02824 TGS domain XHV734_1124 PF01042 Endoribonuclease L-PSP XHV734_1125 PF17191 RecG wedge domain XHV734_1125 PF00270 DEAD/DEAH box helicase XHV734_1125 PF00271 Helicase conserved C-terminal domain XHV734_1126 PF01156 Inosine-uridine preferring nucleoside hydrolase XHV734_1127 PF01197 Ribosomal protein L31 XHV734_1128 PF00285 Citrate synthase, C-terminal domain XHV734_1130 PF00905 Penicillin binding protein transpeptidase domain XHV734_1130 PF00912 Transglycosylase XHV734_1130 PF17092 Penicillin-binding protein OB-like domain XHV734_1131 PF11104 Type IV pilus assembly protein PilM; XHV734_1132 PF05137 Fimbrial assembly protein (PilN) XHV734_1133 PF04350 Pilus assembly protein, PilO XHV734_1134 PF04351 Pilus assembly protein, PilP XHV734_1135 PF11741 AMIN domain XHV734_1135 PF07660 Secretin and TonB N terminus short domain XHV734_1135 PF03958 Bacterial type II/III secretion system short domain XHV734_1135 PF00263 Bacterial type II and III secretion system protein XHV734_1136 PF17863 AAA lid domain XHV734_1136 PF07726 ATPase family associated with various cellular activities (AAA) XHV734_1140 PF07584 Aerotolerance regulator N-terminal XHV734_1140 PF13519 von Willebrand factor type A domain XHV734_1144 PF00375 Sodium:dicarboxylate symporter family XHV734_1145 PF00456 Transketolase, thiamine diphosphate binding domain XHV734_1145 PF02780 Transketolase, C-terminal domain XHV734_1145 PF02779 Transketolase, pyrimidine binding domain XHV734_1147 PF07715 TonB-dependent Receptor Plug Domain XHV734_1147 PF00593 TonB dependent receptor XHV734_1148 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_1148 PF03466 LysR substrate binding domain XHV734_1151 PF01476 LysM domain XHV734_1151 PF03734 L,D-transpeptidase catalytic domain XHV734_1155 PF03965 Penicillinase repressor XHV734_1158 PF03459 TOBE domain XHV734_1158 PF00005 ABC transporter XHV734_1159 PF00528 Binding-protein-dependent transport system inner membrane component XHV734_1161 PF04273 Putative phosphatase (DUF442) XHV734_1161 PF00753 Metallo-beta-lactamase superfamily XHV734_1163 PF03922 OmpW family XHV734_1167 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XHV734_1167 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain XHV734_1171 PF00162 Phosphoglycerate kinase XHV734_1172 PF13419 Haloacid dehalogenase-like hydrolase XHV734_1173 PF00224 Pyruvate kinase, barrel domain XHV734_1173 PF02887 Pyruvate kinase, alpha/beta domain XHV734_1174 PF00274 Fructose-bisphosphate aldolase class-I XHV734_1175 PF01661 Macro domain XHV734_1177 PF00291 Pyridoxal-phosphate dependent enzyme XHV734_1178 PF10414 Sirohaem synthase dimerisation region XHV734_1178 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XHV734_1178 PF14824 Sirohaem biosynthesis protein central XHV734_1179 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_1179 PF03466 LysR substrate binding domain XHV734_1182 PF00512 His Kinase A (phospho-acceptor) domain XHV734_1182 PF00072 Response regulator receiver domain XHV734_1182 PF01627 Hpt domain XHV734_1182 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_1182 PF00672 HAMP domain XHV734_1187 PF01507 Phosphoadenosine phosphosulfate reductase family XHV734_1188 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain XHV734_1188 PF01077 Nitrite and sulphite reductase 4Fe-4S domain XHV734_1189 PF00667 FAD binding domain XHV734_1189 PF00258 Flavodoxin XHV734_1189 PF00175 Oxidoreductase NAD-binding domain XHV734_1190 PF01507 Phosphoadenosine phosphosulfate reductase family XHV734_1191 PF00009 Elongation factor Tu GTP binding domain XHV734_1192 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XHV734_1192 PF00529 HlyD membrane-fusion protein of T1SS XHV734_1193 PF00873 AcrB/AcrD/AcrF family XHV734_1196 PF01433 Peptidase family M1 domain XHV734_1196 PF11838 ERAP1-like C-terminal domain XHV734_1197 PF00588 SpoU rRNA Methylase family XHV734_1197 PF08032 RNA 2'-O ribose methyltransferase substrate binding XHV734_1198 PF00135 Carboxylesterase family XHV734_1201 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation XHV734_1201 PF14508 Glycosyl-hydrolase 97 N-terminal XHV734_1201 PF10566 Glycoside hydrolase 97 XHV734_1202 PF00703 Glycosyl hydrolases family 2 XHV734_1202 PF02837 Glycosyl hydrolases family 2, sugar binding domain XHV734_1202 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain XHV734_1204 PF00356 Bacterial regulatory proteins, lacI family XHV734_1206 PF01741 Large-conductance mechanosensitive channel, MscL XHV734_1207 PF01557 Fumarylacetoacetate (FAA) hydrolase family XHV734_1210 PF02080 TrkA-C domain XHV734_1210 PF03600 Citrate transporter XHV734_1211 PF02390 Putative methyltransferase XHV734_1213 PF05690 Thiazole biosynthesis protein ThiG XHV734_1215 PF03797 Autotransporter beta-domain XHV734_1215 PF00657 GDSL-like Lipase/Acylhydrolase XHV734_1224 PF13683 Integrase core domain XHV734_1224 PF13276 HTH-like domain XHV734_1225 PF01527 Transposase XHV734_1228 PF09335 SNARE associated Golgi protein XHV734_1229 PF02203 Tar ligand binding domain homologue XHV734_1229 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XHV734_1229 PF00672 HAMP domain XHV734_1237 PF00128 Alpha amylase, catalytic domain XHV734_1237 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XHV734_1240 PF18030 RimK PreATP-grasp domain XHV734_1240 PF08443 RimK-like ATP-grasp domain XHV734_1241 PF00072 Response regulator receiver domain XHV734_1241 PF00486 Transcriptional regulatory protein, C terminal XHV734_1242 PF00512 His Kinase A (phospho-acceptor) domain XHV734_1242 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_1242 PF00989 PAS fold XHV734_1242 PF11808 Phosphate regulon sensor protein PhoR XHV734_1248 PF01121 Dephospho-CoA kinase XHV734_1249 PF06750 Bacterial Peptidase A24 N-terminal domain XHV734_1249 PF01478 Type IV leader peptidase family XHV734_1250 PF00482 Type II secretion system (T2SS), protein F XHV734_1251 PF07963 Prokaryotic N-terminal methylation motif XHV734_1251 PF00114 Pilin (bacterial filament) XHV734_1252 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XHV734_1252 PF00437 Type II/IV secretion system protein XHV734_1253 PF02954 Bacterial regulatory protein, Fis family XHV734_1253 PF00158 Sigma-54 interaction domain XHV734_1253 PF00072 Response regulator receiver domain XHV734_1254 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_1254 PF00512 His Kinase A (phospho-acceptor) domain XHV734_1255 PF08442 ATP-grasp domain XHV734_1255 PF00549 CoA-ligase XHV734_1256 PF00549 CoA-ligase XHV734_1256 PF02629 CoA binding domain XHV734_1257 PF03466 LysR substrate binding domain XHV734_1257 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_1262 PF00795 Carbon-nitrogen hydrolase XHV734_1262 PF02540 NAD synthase XHV734_1264 PF13525 Outer membrane lipoprotein XHV734_1265 PF00849 RNA pseudouridylate synthase XHV734_1266 PF02578 Multi-copper polyphenol oxidoreductase laccase XHV734_1268 PF04134 Protein of unknown function, DUF393 XHV734_1269 PF02203 Tar ligand binding domain homologue XHV734_1269 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XHV734_1269 PF00672 HAMP domain XHV734_1270 PF01011 PQQ enzyme repeat XHV734_1272 PF00982 Glycosyltransferase family 20 XHV734_1273 PF00723 Glycosyl hydrolases family 15 XHV734_1274 PF02358 Trehalose-phosphatase XHV734_1276 PF07715 TonB-dependent Receptor Plug Domain XHV734_1276 PF00593 TonB dependent receptor XHV734_1284 PF01541 GIY-YIG catalytic domain XHV734_1285 PF00593 TonB dependent receptor XHV734_1285 PF07715 TonB-dependent Receptor Plug Domain XHV734_1286 PF00296 Luciferase-like monooxygenase XHV734_1287 PF00248 Aldo/keto reductase family XHV734_1288 PF09084 NMT1/THI5 like XHV734_1289 PF00528 Binding-protein-dependent transport system inner membrane component XHV734_1290 PF00005 ABC transporter XHV734_1291 PF00004 ATPase family associated with various cellular activities (AAA) XHV734_1291 PF02861 Clp amino terminal domain, pathogenicity island component XHV734_1291 PF17871 AAA lid domain XHV734_1291 PF10431 C-terminal, D2-small domain, of ClpB protein XHV734_1291 PF07724 AAA domain (Cdc48 subfamily) XHV734_1292 PF01053 Cys/Met metabolism PLP-dependent enzyme XHV734_1294 PF07715 TonB-dependent Receptor Plug Domain XHV734_1294 PF00593 TonB dependent receptor XHV734_1295 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase XHV734_1296 PF02277 Phosphoribosyltransferase XHV734_1298 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XHV734_1298 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain XHV734_1299 PF06276 Ferric iron reductase FhuF-like transporter XHV734_1299 PF04183 IucA / IucC family XHV734_1300 PF07690 Major Facilitator Superfamily XHV734_1301 PF06276 Ferric iron reductase FhuF-like transporter XHV734_1301 PF04183 IucA / IucC family XHV734_1303 PF00593 TonB dependent receptor XHV734_1303 PF07660 Secretin and TonB N terminus short domain XHV734_1303 PF07715 TonB-dependent Receptor Plug Domain XHV734_1305 PF02254 TrkA-N domain XHV734_1305 PF00999 Sodium/hydrogen exchanger family XHV734_1306 PF00067 Cytochrome P450 XHV734_1309 PF07715 TonB-dependent Receptor Plug Domain XHV734_1309 PF00593 TonB dependent receptor XHV734_1310 PF00593 TonB dependent receptor XHV734_1310 PF07715 TonB-dependent Receptor Plug Domain XHV734_1312 PF07715 TonB-dependent Receptor Plug Domain XHV734_1312 PF00593 TonB dependent receptor XHV734_1313 PF12848 ABC transporter XHV734_1313 PF00005 ABC transporter XHV734_1315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_1315 PF03466 LysR substrate binding domain XHV734_1319 PF04185 Phosphoesterase family XHV734_1319 PF05506 Domain of unknown function (DUF756) XHV734_1323 PF07690 Major Facilitator Superfamily XHV734_1327 PF00152 tRNA synthetases class II (D, K and N) XHV734_1327 PF02938 GAD domain XHV734_1327 PF01336 OB-fold nucleic acid binding domain XHV734_1330 PF01709 Transcriptional regulator XHV734_1331 PF02075 Crossover junction endodeoxyribonuclease RuvC XHV734_1332 PF07499 RuvA, C-terminal domain XHV734_1332 PF01330 RuvA N terminal domain XHV734_1333 PF02705 K+ potassium transporter XHV734_1334 PF05491 RuvB C-terminal winged helix domain XHV734_1334 PF17864 RuvB AAA lid domain XHV734_1334 PF05496 Holliday junction DNA helicase RuvB P-loop domain XHV734_1335 PF03061 Thioesterase superfamily XHV734_1336 PF01618 MotA/TolQ/ExbB proton channel family XHV734_1337 PF02472 Biopolymer transport protein ExbD/TolR XHV734_1339 PF04052 TolB amino-terminal domain XHV734_1339 PF07676 WD40-like Beta Propeller Repeat XHV734_1340 PF00691 OmpA family XHV734_1342 PF04055 Radical SAM superfamily XHV734_1343 PF00248 Aldo/keto reductase family XHV734_1356 PF13148 Protein of unknown function (DUF3987) XHV734_1361 PF13356 Arm DNA-binding domain XHV734_1361 PF00589 Phage integrase family XHV734_1362 PF06508 Queuosine biosynthesis protein QueC XHV734_1364 PF13581 Histidine kinase-like ATPase domain XHV734_1364 PF07536 HWE histidine kinase XHV734_1364 PF13426 PAS domain XHV734_1366 PF03466 LysR substrate binding domain XHV734_1366 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_1367 PF01810 LysE type translocator XHV734_1374 PF01263 Aldose 1-epimerase XHV734_1375 PF01578 Cytochrome C assembly protein XHV734_1376 PF02881 SRP54-type protein, helical bundle domain XHV734_1376 PF02978 Signal peptide binding domain XHV734_1376 PF00448 SRP54-type protein, GTPase domain XHV734_1377 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) XHV734_1378 PF03060 Nitronate monooxygenase XHV734_1380 PF00886 Ribosomal protein S16 XHV734_1381 PF01782 RimM N-terminal domain XHV734_1381 PF05239 PRC-barrel domain XHV734_1382 PF01746 tRNA (Guanine-1)-methyltransferase XHV734_1383 PF01245 Ribosomal protein L19 XHV734_1384 PF01554 MatE XHV734_1385 PF01479 S4 domain XHV734_1389 PF00141 Peroxidase XHV734_1391 PF05190 MutS family domain IV XHV734_1391 PF05192 MutS domain III XHV734_1391 PF05188 MutS domain II XHV734_1391 PF01624 MutS domain I XHV734_1391 PF00488 MutS domain V XHV734_1395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XHV734_1395 PF02203 Tar ligand binding domain homologue XHV734_1395 PF00672 HAMP domain XHV734_1399 PF17754 MftR C-terminal domain XHV734_1399 PF00440 Bacterial regulatory proteins, tetR family XHV734_1400 PF00296 Luciferase-like monooxygenase XHV734_1402 PF00106 short chain dehydrogenase XHV734_1404 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_1404 PF03466 LysR substrate binding domain XHV734_1405 PF00375 Sodium:dicarboxylate symporter family XHV734_1406 PF13378 Enolase C-terminal domain-like XHV734_1407 PF16355 Domain of unknown function (DUF4982) XHV734_1407 PF02837 Glycosyl hydrolases family 2, sugar binding domain XHV734_1407 PF02836 Glycosyl hydrolases family 2, TIM barrel domain XHV734_1407 PF00703 Glycosyl hydrolases family 2 XHV734_1407 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 XHV734_1408 PF07745 Glycosyl hydrolase family 53 XHV734_1411 PF01381 Helix-turn-helix XHV734_1411 PF06114 IrrE N-terminal-like domain XHV734_1411 PF09856 Predicted transcriptional regulator (DUF2083) XHV734_1412 PF00171 Aldehyde dehydrogenase family XHV734_1413 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XHV734_1413 PF02770 Acyl-CoA dehydrogenase, middle domain XHV734_1413 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XHV734_1414 PF00378 Enoyl-CoA hydratase/isomerase XHV734_1415 PF00378 Enoyl-CoA hydratase/isomerase XHV734_1416 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase XHV734_1416 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XHV734_1423 PF05598 Transposase domain (DUF772) XHV734_1423 PF01609 Transposase DDE domain XHV734_1425 PF01545 Cation efflux family XHV734_1431 PF13181 Tetratricopeptide repeat XHV734_1432 PF00593 TonB dependent receptor XHV734_1432 PF07715 TonB-dependent Receptor Plug Domain XHV734_1433 PF00378 Enoyl-CoA hydratase/isomerase XHV734_1433 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XHV734_1433 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XHV734_1434 PF04542 Sigma-70 region 2 XHV734_1434 PF08281 Sigma-70, region 4 XHV734_1436 PF13180 PDZ domain XHV734_1437 PF06421 GTP-binding protein LepA C-terminus XHV734_1437 PF00009 Elongation factor Tu GTP binding domain XHV734_1437 PF00679 Elongation factor G C-terminus XHV734_1437 PF03144 Elongation factor Tu domain 2 XHV734_1438 PF10502 Signal peptidase, peptidase S26 XHV734_1440 PF00035 Double-stranded RNA binding motif XHV734_1440 PF14622 Ribonuclease-III-like XHV734_1441 PF01926 50S ribosome-binding GTPase XHV734_1441 PF07650 KH domain XHV734_1442 PF02565 Recombination protein O C terminal XHV734_1442 PF11967 Recombination protein O N terminal XHV734_1443 PF00072 Response regulator receiver domain XHV734_1443 PF00486 Transcriptional regulatory protein, C terminal XHV734_1444 PF05958 tRNA (Uracil-5-)-methyltransferase XHV734_1447 PF01928 CYTH domain XHV734_1448 PF01323 DSBA-like thioredoxin domain XHV734_1449 PF01593 Flavin containing amine oxidoreductase XHV734_1450 PF04244 Deoxyribodipyrimidine photo-lyase-related protein XHV734_1451 PF00933 Glycosyl hydrolase family 3 N terminal domain XHV734_1452 PF00156 Phosphoribosyl transferase domain XHV734_1453 PF01048 Phosphorylase superfamily XHV734_1454 PF00313 'Cold-shock' DNA-binding domain XHV734_1455 PF01494 FAD binding domain XHV734_1457 PF00271 Helicase conserved C-terminal domain XHV734_1457 PF08494 DEAD/H associated XHV734_1457 PF00270 DEAD/DEAH box helicase XHV734_1458 PF04675 DNA ligase N terminus XHV734_1458 PF01068 ATP dependent DNA ligase domain XHV734_1458 PF04679 ATP dependent DNA ligase C terminal region XHV734_1459 PF04675 DNA ligase N terminus XHV734_1459 PF01068 ATP dependent DNA ligase domain XHV734_1459 PF04679 ATP dependent DNA ligase C terminal region XHV734_1463 PF00990 Diguanylate cyclase, GGDEF domain XHV734_1463 PF00072 Response regulator receiver domain XHV734_1467 PF02803 Thiolase, C-terminal domain XHV734_1467 PF00108 Thiolase, N-terminal domain XHV734_1468 PF12951 Passenger-associated-transport-repeat XHV734_1468 PF00082 Subtilase family XHV734_1468 PF03797 Autotransporter beta-domain XHV734_1469 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain XHV734_1469 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase XHV734_1473 PF01863 Protein of unknown function DUF45 XHV734_1474 PF07043 Protein of unknown function (DUF1328) XHV734_1477 PF01258 Prokaryotic dksA/traR C4-type zinc finger XHV734_1481 PF08281 Sigma-70, region 4 XHV734_1481 PF04542 Sigma-70 region 2 XHV734_1487 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XHV734_1489 PF08274 PhnA Zinc-Ribbon XHV734_1489 PF03831 PhnA domain XHV734_1493 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XHV734_1494 PF07690 Major Facilitator Superfamily XHV734_1501 PF09924 Uncharacterised conserved protein (DUF2156) XHV734_1501 PF03706 Lysylphosphatidylglycerol synthase TM region XHV734_1503 PF01042 Endoribonuclease L-PSP XHV734_1514 PF04542 Sigma-70 region 2 XHV734_1514 PF04545 Sigma-70, region 4 XHV734_1518 PF04060 Putative Fe-S cluster XHV734_1520 PF01588 Putative tRNA binding domain XHV734_1520 PF09334 tRNA synthetases class I (M) XHV734_1522 PF03743 Bacterial conjugation TrbI-like protein XHV734_1523 PF03524 Conjugal transfer protein XHV734_1525 PF04610 TrbL/VirB6 plasmid conjugal transfer protein XHV734_1528 PF03135 CagE, TrbE, VirB family, component of type IV transporter system XHV734_1530 PF04956 TrbC/VIRB2 family XHV734_1531 PF00437 Type II/IV secretion system protein XHV734_1533 PF02534 Type IV secretory system Conjugative DNA transfer XHV734_1535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_1535 PF03466 LysR substrate binding domain XHV734_1536 PF00296 Luciferase-like monooxygenase XHV734_1537 PF07690 Major Facilitator Superfamily XHV734_1538 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_1538 PF03466 LysR substrate binding domain XHV734_1539 PF00106 short chain dehydrogenase XHV734_1541 PF00043 Glutathione S-transferase, C-terminal domain XHV734_1541 PF02798 Glutathione S-transferase, N-terminal domain XHV734_1543 PF02350 UDP-N-acetylglucosamine 2-epimerase XHV734_1547 PF10502 Signal peptidase, peptidase S26 XHV734_1550 PF13614 AAA domain XHV734_1558 PF05284 Protein of unknown function (DUF736) XHV734_1559 PF17762 HTH domain found in ParB protein XHV734_1559 PF02195 ParB-like nuclease domain XHV734_1560 PF06067 Domain of unknown function (DUF932) XHV734_1561 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XHV734_1566 PF06250 YhcG PDDEXK nuclease domain XHV734_1566 PF17761 DUF1016 N-terminal domain XHV734_1570 PF13732 Domain of unknown function (DUF4162) XHV734_1570 PF00005 ABC transporter XHV734_1572 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XHV734_1573 PF00324 Amino acid permease XHV734_1574 PF02574 Homocysteine S-methyltransferase XHV734_1577 PF01810 LysE type translocator XHV734_1578 PF02592 Putative vitamin uptake transporter XHV734_1585 PF03551 Transcriptional regulator PadR-like family XHV734_1592 PF03653 Uncharacterised protein family (UPF0093) XHV734_1594 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit XHV734_1595 PF14579 Helix-hairpin-helix motif XHV734_1595 PF17657 Bacterial DNA polymerase III alpha subunit finger domain XHV734_1595 PF07733 Bacterial DNA polymerase III alpha NTPase domain XHV734_1595 PF02811 PHP domain XHV734_1595 PF01336 OB-fold nucleic acid binding domain XHV734_1596 PF01351 Ribonuclease HII XHV734_1597 PF02684 Lipid-A-disaccharide synthetase XHV734_1598 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 XHV734_1598 PF00132 Bacterial transferase hexapeptide (six repeats) XHV734_1599 PF07977 FabA-like domain XHV734_1600 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD XHV734_1600 PF00132 Bacterial transferase hexapeptide (six repeats) XHV734_1602 PF07244 Surface antigen variable number repeat XHV734_1602 PF01103 Surface antigen XHV734_1603 PF17820 PDZ domain XHV734_1603 PF02163 Peptidase family M50 XHV734_1604 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain XHV734_1604 PF13288 DXP reductoisomerase C-terminal domain XHV734_1604 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase XHV734_1606 PF01255 Putative undecaprenyl diphosphate synthase XHV734_1607 PF01765 Ribosome recycling factor XHV734_1608 PF00696 Amino acid kinase family XHV734_1609 PF00990 Diguanylate cyclase, GGDEF domain XHV734_1609 PF00072 Response regulator receiver domain XHV734_1610 PF00889 Elongation factor TS XHV734_1611 PF00318 Ribosomal protein S2 XHV734_1618 PF00557 Metallopeptidase family M24 XHV734_1619 PF01909 Nucleotidyltransferase domain XHV734_1619 PF08335 GlnD PII-uridylyltransferase XHV734_1619 PF01966 HD domain XHV734_1620 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal XHV734_1620 PF14602 Hexapeptide repeat of succinyl-transferase XHV734_1620 PF00132 Bacterial transferase hexapeptide (six repeats) XHV734_1622 PF03960 ArsC family XHV734_1623 PF07687 Peptidase dimerisation domain XHV734_1623 PF01546 Peptidase family M20/M25/M40 XHV734_1625 PF00733 Asparagine synthase XHV734_1625 PF13537 Glutamine amidotransferase domain XHV734_1627 PF07715 TonB-dependent Receptor Plug Domain XHV734_1627 PF00593 TonB dependent receptor XHV734_1630 PF01804 Penicillin amidase XHV734_1631 PF00210 Ferritin-like domain XHV734_1632 PF05724 Thiopurine S-methyltransferase (TPMT) XHV734_1634 PF03989 DNA gyrase C-terminal domain, beta-propeller XHV734_1634 PF00521 DNA gyrase/topoisomerase IV, subunit A XHV734_1638 PF02321 Outer membrane efflux protein XHV734_1639 PF00529 HlyD membrane-fusion protein of T1SS XHV734_1639 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XHV734_1640 PF07690 Major Facilitator Superfamily XHV734_1642 PF01915 Glycosyl hydrolase family 3 C-terminal domain XHV734_1642 PF00933 Glycosyl hydrolase family 3 N terminal domain XHV734_1642 PF14310 Fibronectin type III-like domain XHV734_1644 PF00854 POT family XHV734_1649 PF12802 MarR family XHV734_1650 PF01432 Peptidase family M3 XHV734_1652 PF00255 Glutathione peroxidase XHV734_1653 PF00970 Oxidoreductase FAD-binding domain XHV734_1653 PF00175 Oxidoreductase NAD-binding domain XHV734_1654 PF00005 ABC transporter XHV734_1655 PF05681 Fumarate hydratase (Fumerase) XHV734_1655 PF05683 Fumarase C-terminus XHV734_1659 PF00484 Carbonic anhydrase XHV734_1662 PF02253 Phospholipase A1 XHV734_1664 PF00313 'Cold-shock' DNA-binding domain XHV734_1667 PF00899 ThiF family XHV734_1668 PF01026 TatD related DNase XHV734_1671 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XHV734_1671 PF02770 Acyl-CoA dehydrogenase, middle domain XHV734_1671 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XHV734_1673 PF00043 Glutathione S-transferase, C-terminal domain XHV734_1673 PF02798 Glutathione S-transferase, N-terminal domain XHV734_1674 PF13537 Glutamine amidotransferase domain XHV734_1674 PF00733 Asparagine synthase XHV734_1676 PF03358 NADPH-dependent FMN reductase XHV734_1677 PF03796 DnaB-like helicase C terminal domain XHV734_1677 PF00772 DnaB-like helicase N terminal domain XHV734_1679 PF00875 DNA photolyase XHV734_1679 PF03441 FAD binding domain of DNA photolyase XHV734_1680 PF05736 OprF membrane domain XHV734_1680 PF00691 OmpA family XHV734_1683 PF00085 Thioredoxin XHV734_1685 PF13603 Leucyl-tRNA synthetase, Domain 2 XHV734_1685 PF00133 tRNA synthetases class I (I, L, M and V) XHV734_1685 PF08264 Anticodon-binding domain of tRNA XHV734_1688 PF01467 Cytidylyltransferase-like XHV734_1693 PF02590 Predicted SPOUT methyltransferase XHV734_1697 PF02545 Maf-like protein XHV734_1698 PF10150 Ribonuclease E/G family XHV734_1698 PF00575 S1 RNA binding domain XHV734_1699 PF13116 Protein of unknown function XHV734_1699 PF13502 AsmA-like C-terminal region XHV734_1701 PF01523 Putative modulator of DNA gyrase XHV734_1702 PF04751 Protein of unknown function (DUF615) XHV734_1703 PF01523 Putative modulator of DNA gyrase XHV734_1705 PF14521 Lysine-specific metallo-endopeptidase XHV734_1706 PF00348 Polyprenyl synthetase XHV734_1707 PF02609 Exonuclease VII small subunit XHV734_1708 PF01171 PP-loop family XHV734_1708 PF09179 TilS substrate binding domain XHV734_1708 PF11734 TilS substrate C-terminal domain XHV734_1709 PF00245 Alkaline phosphatase XHV734_1710 PF00375 Sodium:dicarboxylate symporter family XHV734_1711 PF13649 Methyltransferase domain XHV734_1713 PF00877 NlpC/P60 family XHV734_1714 PF00877 NlpC/P60 family XHV734_1715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XHV734_1716 PF04235 Protein of unknown function (DUF418) XHV734_1717 PF07992 Pyridine nucleotide-disulphide oxidoreductase XHV734_1717 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XHV734_1724 PF01431 Peptidase family M13 XHV734_1724 PF05649 Peptidase family M13 XHV734_1729 PF07715 TonB-dependent Receptor Plug Domain XHV734_1729 PF00593 TonB dependent receptor XHV734_1730 PF10609 NUBPL iron-transfer P-loop NTPase XHV734_1731 PF00692 dUTPase XHV734_1735 PF01738 Dienelactone hydrolase family XHV734_1736 PF18693 TRAM domain XHV734_1736 PF00919 Uncharacterized protein family UPF0004 XHV734_1736 PF04055 Radical SAM superfamily XHV734_1737 PF03449 Transcription elongation factor, N-terminal XHV734_1737 PF01272 Transcription elongation factor, GreA/GreB, C-term XHV734_1740 PF05598 Transposase domain (DUF772) XHV734_1740 PF01609 Transposase DDE domain XHV734_1741 PF00933 Glycosyl hydrolase family 3 N terminal domain XHV734_1741 PF14310 Fibronectin type III-like domain XHV734_1741 PF01915 Glycosyl hydrolase family 3 C-terminal domain XHV734_1747 PF00293 NUDIX domain XHV734_1749 PF05872 Bacterial protein of unknown function (DUF853) XHV734_1751 PF02666 Phosphatidylserine decarboxylase XHV734_1752 PF02630 SCO1/SenC XHV734_1753 PF05175 Methyltransferase small domain XHV734_1755 PF01264 Chorismate synthase XHV734_1756 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XHV734_1756 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XHV734_1757 PF02774 Semialdehyde dehydrogenase, dimerisation domain XHV734_1757 PF01118 Semialdehyde dehydrogenase, NAD binding domain XHV734_1760 PF01416 tRNA pseudouridine synthase XHV734_1761 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase XHV734_1762 PF03466 LysR substrate binding domain XHV734_1762 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_1763 PF00291 Pyridoxal-phosphate dependent enzyme XHV734_1765 PF00290 Tryptophan synthase alpha chain XHV734_1767 PF17848 Acetyl-coA carboxylase zinc finger domain XHV734_1767 PF01039 Carboxyl transferase domain XHV734_1768 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XHV734_1768 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XHV734_1768 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XHV734_1768 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XHV734_1771 PF03707 Bacterial signalling protein N terminal repeat XHV734_1771 PF00990 Diguanylate cyclase, GGDEF domain XHV734_1771 PF00563 EAL domain XHV734_1778 PF00106 short chain dehydrogenase XHV734_1779 PF00121 Triosephosphate isomerase XHV734_1781 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 XHV734_1782 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit XHV734_1783 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit XHV734_1784 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit XHV734_1786 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region XHV734_1786 PF10531 SLBB domain XHV734_1786 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit XHV734_1787 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XHV734_1787 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal XHV734_1787 PF00384 Molybdopterin oxidoreductase XHV734_1788 PF00146 NADH dehydrogenase XHV734_1789 PF12838 4Fe-4S dicluster domain XHV734_1790 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 XHV734_1791 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L XHV734_1792 PF00361 Proton-conducting membrane transporter XHV734_1792 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus XHV734_1793 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus XHV734_1793 PF00361 Proton-conducting membrane transporter XHV734_1794 PF00361 Proton-conducting membrane transporter XHV734_1796 PF17384 RimP C-terminal SH3 domain XHV734_1796 PF02576 RimP N-terminal domain XHV734_1797 PF13184 NusA-like KH domain XHV734_1797 PF08529 NusA N-terminal domain XHV734_1797 PF00575 S1 RNA binding domain XHV734_1799 PF04760 Translation initiation factor IF-2, N-terminal region XHV734_1799 PF11987 Translation-initiation factor 2 XHV734_1799 PF08364 Bacterial translation initiation factor IF-2 associated region XHV734_1799 PF00009 Elongation factor Tu GTP binding domain XHV734_1800 PF02033 Ribosome-binding factor A XHV734_1801 PF09157 Pseudouridine synthase II TruB, C-terminal XHV734_1801 PF01509 TruB family pseudouridylate synthase (N terminal domain) XHV734_1801 PF16198 tRNA pseudouridylate synthase B C-terminal domain XHV734_1802 PF00312 Ribosomal protein S15 XHV734_1803 PF00013 KH domain XHV734_1803 PF03725 3' exoribonuclease family, domain 2 XHV734_1803 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain XHV734_1803 PF00575 S1 RNA binding domain XHV734_1803 PF01138 3' exoribonuclease family, domain 1 XHV734_1805 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain XHV734_1805 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain XHV734_1807 PF00731 AIR carboxylase XHV734_1808 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain XHV734_1808 PF02222 ATP-grasp domain XHV734_1809 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XHV734_1809 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XHV734_1810 PF00462 Glutaredoxin XHV734_1812 PF01914 MarC family integral membrane protein XHV734_1813 PF00593 TonB dependent receptor XHV734_1813 PF00593 TonB dependent receptor XHV734_1814 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases XHV734_1814 PF11892 Domain of unknown function (DUF3412) XHV734_1814 PF03641 Possible lysine decarboxylase XHV734_1815 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor XHV734_1815 PF07963 Prokaryotic N-terminal methylation motif XHV734_1819 PF05567 Neisseria PilC beta-propeller domain XHV734_1822 PF17757 UvrB interaction domain XHV734_1822 PF02151 UvrB/uvrC motif XHV734_1822 PF04851 Type III restriction enzyme, res subunit XHV734_1822 PF12344 Ultra-violet resistance protein B XHV734_1822 PF00271 Helicase conserved C-terminal domain XHV734_1824 PF02534 Type IV secretory system Conjugative DNA transfer XHV734_1828 PF03743 Bacterial conjugation TrbI-like protein XHV734_1829 PF00437 Type II/IV secretion system protein XHV734_1830 PF01464 Transglycosylase SLT domain XHV734_1832 PF05101 Type IV secretory pathway, VirB3-like protein XHV734_1834 PF03135 CagE, TrbE, VirB family, component of type IV transporter system XHV734_1842 PF01527 Transposase XHV734_1843 PF13276 HTH-like domain XHV734_1843 PF13683 Integrase core domain XHV734_1844 PF02824 TGS domain XHV734_1844 PF03129 Anticodon binding domain XHV734_1844 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XHV734_1844 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XHV734_1845 PF05198 Translation initiation factor IF-3, N-terminal domain XHV734_1845 PF00707 Translation initiation factor IF-3, C-terminal domain XHV734_1847 PF01632 Ribosomal protein L35 XHV734_1848 PF00453 Ribosomal protein L20 XHV734_1849 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain XHV734_1849 PF01409 tRNA synthetases class II core domain (F) XHV734_1850 PF03483 B3/4 domain XHV734_1850 PF03484 tRNA synthetase B5 domain XHV734_1850 PF03147 Ferredoxin-fold anticodon binding domain XHV734_1850 PF01588 Putative tRNA binding domain XHV734_1850 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain XHV734_1851 PF00216 Bacterial DNA-binding protein XHV734_1852 PF13411 MerR HTH family regulatory protein XHV734_1855 PF02397 Bacterial sugar transferase XHV734_1859 PF13439 Glycosyltransferase Family 4 XHV734_1859 PF00534 Glycosyl transferases group 1 XHV734_1861 PF14667 Polysaccharide biosynthesis C-terminal domain XHV734_1864 PF03808 Glycosyl transferase WecB/TagA/CpsF family XHV734_1868 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XHV734_1868 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XHV734_1869 PF00753 Metallo-beta-lactamase superfamily XHV734_1869 PF16123 Hydroxyacylglutathione hydrolase C-terminus XHV734_1870 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family XHV734_1876 PF02780 Transketolase, C-terminal domain XHV734_1876 PF02779 Transketolase, pyrimidine binding domain XHV734_1876 PF13292 1-deoxy-D-xylulose-5-phosphate synthase XHV734_1878 PF02770 Acyl-CoA dehydrogenase, middle domain XHV734_1878 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XHV734_1878 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XHV734_1878 PF12806 Acetyl-CoA dehydrogenase C-terminal like XHV734_1880 PF08212 Lipocalin-like domain XHV734_1885 PF00893 Small Multidrug Resistance protein XHV734_1892 PF04362 Bacterial Fe(2+) trafficking XHV734_1893 PF10576 Iron-sulfur binding domain of endonuclease III XHV734_1893 PF00633 Helix-hairpin-helix motif XHV734_1893 PF00730 HhH-GPD superfamily base excision DNA repair protein XHV734_1893 PF14815 NUDIX domain XHV734_1894 PF00448 SRP54-type protein, GTPase domain XHV734_1894 PF02881 SRP54-type protein, helical bundle domain XHV734_1896 PF05544 Proline racemase XHV734_1897 PF01266 FAD dependent oxidoreductase XHV734_1899 PF07992 Pyridine nucleotide-disulphide oxidoreductase XHV734_1899 PF04324 BFD-like [2Fe-2S] binding domain XHV734_1900 PF00701 Dihydrodipicolinate synthetase family XHV734_1901 PF00171 Aldehyde dehydrogenase family XHV734_1902 PF00557 Metallopeptidase family M24 XHV734_1902 PF01321 Creatinase/Prolidase N-terminal domain XHV734_1905 PF13520 Amino acid permease XHV734_1912 PF09286 Pro-kumamolisin, activation domain XHV734_1912 PF00082 Subtilase family XHV734_1917 PF07532 Bacterial Ig-like domain (group 4) XHV734_1918 PF07532 Bacterial Ig-like domain (group 4) XHV734_1920 PF07715 TonB-dependent Receptor Plug Domain XHV734_1920 PF00593 TonB dependent receptor XHV734_1925 PF13333 Integrase core domain XHV734_1925 PF00665 Integrase core domain XHV734_1925 PF13276 HTH-like domain XHV734_1926 PF01527 Transposase XHV734_1927 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_1927 PF00183 Hsp90 protein XHV734_1929 PF01467 Cytidylyltransferase-like XHV734_1931 PF00037 4Fe-4S binding domain XHV734_1933 PF00759 Glycosyl hydrolase family 9 XHV734_1933 PF02927 Cellulase N-terminal ig-like domain XHV734_1944 PF02547 Queuosine biosynthesis protein XHV734_1945 PF01702 Queuine tRNA-ribosyltransferase XHV734_1946 PF02699 Preprotein translocase subunit XHV734_1947 PF02355 Protein export membrane protein XHV734_1947 PF13721 SecD export protein N-terminal TM region XHV734_1947 PF07549 SecD/SecF GG Motif XHV734_1948 PF02355 Protein export membrane protein XHV734_1948 PF07549 SecD/SecF GG Motif XHV734_1956 PF01609 Transposase DDE domain XHV734_1956 PF05598 Transposase domain (DUF772) XHV734_1959 PF01527 Transposase XHV734_1964 PF01527 Transposase XHV734_1965 PF13276 HTH-like domain XHV734_1965 PF13683 Integrase core domain XHV734_1969 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit XHV734_1971 PF00294 pfkB family carbohydrate kinase XHV734_1972 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 XHV734_1972 PF00381 PTS HPr component phosphorylation site XHV734_1972 PF02896 PEP-utilising enzyme, TIM barrel domain XHV734_1972 PF00391 PEP-utilising enzyme, mobile domain XHV734_1972 PF05524 PEP-utilising enzyme, N-terminal XHV734_1973 PF00356 Bacterial regulatory proteins, lacI family XHV734_1974 PF00873 AcrB/AcrD/AcrF family XHV734_1975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XHV734_1975 PF00529 HlyD membrane-fusion protein of T1SS XHV734_1977 PF05088 Bacterial NAD-glutamate dehydrogenase XHV734_1986 PF08240 Alcohol dehydrogenase GroES-like domain XHV734_1986 PF16197 Ketoacyl-synthetase C-terminal extension XHV734_1986 PF00109 Beta-ketoacyl synthase, N-terminal domain XHV734_1986 PF02801 Beta-ketoacyl synthase, C-terminal domain XHV734_1986 PF08659 KR domain XHV734_1986 PF00550 Phosphopantetheine attachment site XHV734_1986 PF14765 Polyketide synthase dehydratase XHV734_1986 PF00698 Acyl transferase domain XHV734_1987 PF00106 short chain dehydrogenase XHV734_1988 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XHV734_1989 PF00440 Bacterial regulatory proteins, tetR family XHV734_1992 PF00106 short chain dehydrogenase XHV734_1993 PF00107 Zinc-binding dehydrogenase XHV734_1993 PF08240 Alcohol dehydrogenase GroES-like domain XHV734_1996 PF07690 Major Facilitator Superfamily XHV734_1997 PF00072 Response regulator receiver domain XHV734_1998 PF01627 Hpt domain XHV734_1998 PF00512 His Kinase A (phospho-acceptor) domain XHV734_1998 PF00672 HAMP domain XHV734_1998 PF00072 Response regulator receiver domain XHV734_1998 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) XHV734_1998 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_1999 PF04286 Protein of unknown function (DUF445) XHV734_2001 PF00202 Aminotransferase class-III XHV734_2003 PF07690 Major Facilitator Superfamily XHV734_2004 PF02634 FdhD/NarQ family XHV734_2005 PF00384 Molybdopterin oxidoreductase XHV734_2012 PF00072 Response regulator receiver domain XHV734_2012 PF00990 Diguanylate cyclase, GGDEF domain XHV734_2015 PF01266 FAD dependent oxidoreductase XHV734_2016 PF00120 Glutamine synthetase, catalytic domain XHV734_2017 PF07722 Peptidase C26 XHV734_2018 PF00120 Glutamine synthetase, catalytic domain XHV734_2019 PF00202 Aminotransferase class-III XHV734_2020 PF13416 Bacterial extracellular solute-binding protein XHV734_2021 PF13533 Biotin-lipoyl like XHV734_2022 PF07690 Major Facilitator Superfamily XHV734_2023 PF02321 Outer membrane efflux protein XHV734_2024 PF00005 ABC transporter XHV734_2024 PF08402 TOBE domain XHV734_2025 PF00528 Binding-protein-dependent transport system inner membrane component XHV734_2026 PF00528 Binding-protein-dependent transport system inner membrane component XHV734_2030 PF00171 Aldehyde dehydrogenase family XHV734_2034 PF00571 CBS domain XHV734_2034 PF03471 Transporter associated domain XHV734_2036 PF02130 Uncharacterized protein family UPF0054 XHV734_2038 PF02562 PhoH-like protein XHV734_2040 PF01938 TRAM domain XHV734_2040 PF00919 Uncharacterized protein family UPF0004 XHV734_2040 PF04055 Radical SAM superfamily XHV734_2043 PF01464 Transglycosylase SLT domain XHV734_2044 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal XHV734_2044 PF00355 Rieske [2Fe-2S] domain XHV734_2045 PF00033 Cytochrome b/b6/petB XHV734_2045 PF00032 Cytochrome b(C-terminal)/b6/petD XHV734_2046 PF02167 Cytochrome C1 family XHV734_2048 PF02798 Glutathione S-transferase, N-terminal domain XHV734_2048 PF00043 Glutathione S-transferase, C-terminal domain XHV734_2049 PF04386 Stringent starvation protein B XHV734_2051 PF00270 DEAD/DEAH box helicase XHV734_2051 PF00271 Helicase conserved C-terminal domain XHV734_2051 PF08494 DEAD/H associated XHV734_2054 PF12729 Four helix bundle sensory module for signal transduction XHV734_2054 PF00672 HAMP domain XHV734_2054 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XHV734_2055 PF01584 CheW-like domain XHV734_2056 PF00990 Diguanylate cyclase, GGDEF domain XHV734_2056 PF07694 5TMR of 5TMR-LYT XHV734_2061 PF00570 HRDC domain XHV734_2061 PF01612 3'-5' exonuclease XHV734_2062 PF03781 Sulfatase-modifying factor enzyme 1 XHV734_2064 PF13742 OB-fold nucleic acid binding domain XHV734_2064 PF02601 Exonuclease VII, large subunit XHV734_2065 PF08331 Domain of unknown function (DUF1730) XHV734_2066 PF01256 Carbohydrate kinase XHV734_2066 PF03853 YjeF-related protein N-terminus XHV734_2068 PF11741 AMIN domain XHV734_2068 PF01520 N-acetylmuramoyl-L-alanine amidase XHV734_2069 PF01119 DNA mismatch repair protein, C-terminal domain XHV734_2069 PF08676 MutL C terminal dimerisation domain XHV734_2072 PF07879 PHB/PHA accumulation regulator DNA-binding domain XHV734_2072 PF05233 PHB accumulation regulatory domain XHV734_2073 PF00106 short chain dehydrogenase XHV734_2074 PF00749 tRNA synthetases class I (E and Q), catalytic domain XHV734_2075 PF01435 Peptidase family M48 XHV734_2076 PF03707 Bacterial signalling protein N terminal repeat XHV734_2076 PF00563 EAL domain XHV734_2076 PF00990 Diguanylate cyclase, GGDEF domain XHV734_2078 PF07152 YaeQ protein XHV734_2079 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 XHV734_2081 PF00313 'Cold-shock' DNA-binding domain XHV734_2082 PF02798 Glutathione S-transferase, N-terminal domain XHV734_2082 PF14497 Glutathione S-transferase, C-terminal domain XHV734_2083 PF07859 alpha/beta hydrolase fold XHV734_2085 PF02696 Uncharacterized ACR, YdiU/UPF0061 family XHV734_2086 PF00156 Phosphoribosyl transferase domain XHV734_2087 PF00271 Helicase conserved C-terminal domain XHV734_2087 PF00270 DEAD/DEAH box helicase XHV734_2087 PF03880 DbpA RNA binding domain XHV734_2088 PF16326 ABC transporter C-terminal domain XHV734_2088 PF12848 ABC transporter XHV734_2088 PF00005 ABC transporter XHV734_2089 PF01208 Uroporphyrinogen decarboxylase (URO-D) XHV734_2091 PF01761 3-dehydroquinate synthase XHV734_2092 PF01202 Shikimate kinase XHV734_2093 PF01243 Pyridoxamine 5'-phosphate oxidase XHV734_2093 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region XHV734_2094 PF00583 Acetyltransferase (GNAT) family XHV734_2096 PF04012 PspA/IM30 family XHV734_2101 PF03738 Glutathionylspermidine synthase preATP-grasp XHV734_2102 PF07690 Major Facilitator Superfamily XHV734_2103 PF00376 MerR family regulatory protein XHV734_2103 PF09278 MerR, DNA binding XHV734_2113 PF04820 Tryptophan halogenase XHV734_2114 PF12706 Beta-lactamase superfamily domain XHV734_2117 PF00324 Amino acid permease XHV734_2118 PF00196 Bacterial regulatory proteins, luxR family XHV734_2119 PF00561 alpha/beta hydrolase fold XHV734_2120 PF00544 Pectate lyase XHV734_2121 PF00324 Amino acid permease XHV734_2123 PF01654 Cytochrome bd terminal oxidase subunit I XHV734_2124 PF02322 Cytochrome bd terminal oxidase subunit II XHV734_2125 PF00756 Putative esterase XHV734_2126 PF01769 Divalent cation transporter XHV734_2126 PF03448 MgtE intracellular N domain XHV734_2126 PF00571 CBS domain XHV734_2127 PF05524 PEP-utilising enzyme, N-terminal XHV734_2127 PF00391 PEP-utilising enzyme, mobile domain XHV734_2127 PF02896 PEP-utilising enzyme, TIM barrel domain XHV734_2128 PF00381 PTS HPr component phosphorylation site XHV734_2131 PF03668 P-loop ATPase protein family XHV734_2132 PF02603 HPr Serine kinase N terminus XHV734_2132 PF07475 HPr Serine kinase C-terminal domain XHV734_2133 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 XHV734_2134 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein XHV734_2136 PF04552 Sigma-54, DNA binding domain XHV734_2136 PF04963 Sigma-54 factor, core binding domain XHV734_2136 PF00309 Sigma-54 factor, Activator interacting domain (AID) XHV734_2137 PF00005 ABC transporter XHV734_2138 PF03968 OstA-like protein XHV734_2141 PF01380 SIS domain XHV734_2141 PF00571 CBS domain XHV734_2142 PF01722 BolA-like protein XHV734_2143 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XHV734_2147 PF00551 Formyl transferase XHV734_2148 PF00586 AIR synthase related protein, N-terminal domain XHV734_2148 PF02769 AIR synthase related protein, C-terminal domain XHV734_2150 PF01594 AI-2E family transporter XHV734_2151 PF00308 Bacterial dnaA protein XHV734_2153 PF00545 ribonuclease XHV734_2154 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XHV734_2154 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XHV734_2156 PF00459 Inositol monophosphatase family XHV734_2157 PF00588 SpoU rRNA Methylase family XHV734_2159 PF13188 PAS domain XHV734_2159 PF00563 EAL domain XHV734_2159 PF00990 Diguanylate cyclase, GGDEF domain XHV734_2159 PF03707 Bacterial signalling protein N terminal repeat XHV734_2160 PF04055 Radical SAM superfamily XHV734_2161 PF09285 Elongation factor P, C-terminal XHV734_2161 PF01132 Elongation factor P (EF-P) OB domain XHV734_2161 PF08207 Elongation factor P (EF-P) KOW-like domain XHV734_2163 PF01979 Amidohydrolase family XHV734_2165 PF13419 Haloacid dehalogenase-like hydrolase XHV734_2167 PF00295 Glycosyl hydrolases family 28 XHV734_2176 PF05985 Ethanolamine ammonia-lyase light chain (EutC) XHV734_2177 PF06751 Ethanolamine ammonia lyase large subunit (EutB) XHV734_2179 PF01551 Peptidase family M23 XHV734_2179 PF08460 Bacterial SH3 domain XHV734_2180 PF01979 Amidohydrolase family XHV734_2181 PF01258 Prokaryotic dksA/traR C4-type zinc finger XHV734_2184 PF02657 Fe-S metabolism associated domain XHV734_2186 PF09190 DALR domain XHV734_2186 PF01406 tRNA synthetases class I (C) catalytic domain XHV734_2188 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XHV734_2188 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XHV734_2189 PF00764 Arginosuccinate synthase XHV734_2190 PF07687 Peptidase dimerisation domain XHV734_2190 PF01546 Peptidase family M20/M25/M40 XHV734_2191 PF00696 Amino acid kinase family XHV734_2191 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase XHV734_2193 PF01118 Semialdehyde dehydrogenase, NAD binding domain XHV734_2194 PF00206 Lyase XHV734_2197 PF01472 PUA domain XHV734_2197 PF00696 Amino acid kinase family XHV734_2198 PF00171 Aldehyde dehydrogenase family XHV734_2201 PF02129 X-Pro dipeptidyl-peptidase (S15 family) XHV734_2201 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain XHV734_2206 PF02322 Cytochrome bd terminal oxidase subunit II XHV734_2208 PF01654 Cytochrome bd terminal oxidase subunit I XHV734_2209 PF00005 ABC transporter XHV734_2209 PF00664 ABC transporter transmembrane region XHV734_2210 PF00664 ABC transporter transmembrane region XHV734_2210 PF00005 ABC transporter XHV734_2212 PF00561 alpha/beta hydrolase fold XHV734_2214 PF03918 Cytochrome C biogenesis protein XHV734_2215 PF08534 Redoxin XHV734_2216 PF01578 Cytochrome C assembly protein XHV734_2216 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal XHV734_2217 PF03100 CcmE XHV734_2219 PF01578 Cytochrome C assembly protein XHV734_2220 PF03379 CcmB protein XHV734_2221 PF00005 ABC transporter XHV734_2222 PF00155 Aminotransferase class I and II XHV734_2223 PF00795 Carbon-nitrogen hydrolase XHV734_2226 PF00849 RNA pseudouridylate synthase XHV734_2226 PF01479 S4 domain XHV734_2227 PF04079 Segregation and condensation complex subunit ScpB XHV734_2228 PF02616 Segregation and condensation protein ScpA XHV734_2229 PF03795 YCII-related domain XHV734_2231 PF00356 Bacterial regulatory proteins, lacI family XHV734_2234 PF01547 Bacterial extracellular solute-binding protein XHV734_2235 PF00528 Binding-protein-dependent transport system inner membrane component XHV734_2236 PF00528 Binding-protein-dependent transport system inner membrane component XHV734_2241 PF00795 Carbon-nitrogen hydrolase XHV734_2242 PF04371 Porphyromonas-type peptidyl-arginine deiminase XHV734_2244 PF00444 Ribosomal protein L36 XHV734_2245 PF02224 Cytidylate kinase XHV734_2246 PF00575 S1 RNA binding domain XHV734_2247 PF00216 Bacterial DNA-binding protein XHV734_2249 PF18073 Rubredoxin metal binding domain XHV734_2250 PF00953 Glycosyl transferase family 4 XHV734_2251 PF02719 Polysaccharide biosynthesis protein XHV734_2252 PF00483 Nucleotidyl transferase XHV734_2253 PF02254 TrkA-N domain XHV734_2253 PF00999 Sodium/hydrogen exchanger family XHV734_2255 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain XHV734_2255 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain XHV734_2256 PF00571 CBS domain XHV734_2256 PF00478 IMP dehydrogenase / GMP reductase domain XHV734_2257 PF00117 Glutamine amidotransferase class-I XHV734_2257 PF00958 GMP synthase C terminal domain XHV734_2257 PF02540 NAD synthase XHV734_2264 PF01609 Transposase DDE domain XHV734_2264 PF05598 Transposase domain (DUF772) XHV734_2266 PF13683 Integrase core domain XHV734_2266 PF13276 HTH-like domain XHV734_2269 PF00561 alpha/beta hydrolase fold XHV734_2271 PF01566 Natural resistance-associated macrophage protein XHV734_2272 PF02742 Iron dependent repressor, metal binding and dimerisation domain XHV734_2272 PF01325 Iron dependent repressor, N-terminal DNA binding domain XHV734_2273 PF14437 MafB19-like deaminase XHV734_2274 PF00929 Exonuclease XHV734_2276 PF00924 Mechanosensitive ion channel XHV734_2276 PF05552 Conserved TM helix XHV734_2277 PF02896 PEP-utilising enzyme, TIM barrel domain XHV734_2277 PF00391 PEP-utilising enzyme, mobile domain XHV734_2277 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain XHV734_2278 PF03618 Kinase/pyrophosphorylase XHV734_2283 PF01066 CDP-alcohol phosphatidyltransferase XHV734_2285 PF00561 alpha/beta hydrolase fold XHV734_2288 PF05430 S-adenosyl-L-methionine-dependent methyltransferase XHV734_2288 PF01266 FAD dependent oxidoreductase XHV734_2291 PF00575 S1 RNA binding domain XHV734_2291 PF17674 HHH domain XHV734_2291 PF16921 Tex protein YqgF-like domain XHV734_2291 PF09371 Tex-like protein N-terminal domain XHV734_2292 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) XHV734_2292 PF00072 Response regulator receiver domain XHV734_2292 PF01627 Hpt domain XHV734_2292 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_2292 PF00672 HAMP domain XHV734_2292 PF00512 His Kinase A (phospho-acceptor) domain XHV734_2295 PF13356 Arm DNA-binding domain XHV734_2295 PF00589 Phage integrase family XHV734_2305 PF00034 Cytochrome c XHV734_2308 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XHV734_2309 PF00873 AcrB/AcrD/AcrF family XHV734_2310 PF00873 AcrB/AcrD/AcrF family XHV734_2312 PF01081 KDPG and KHG aldolase XHV734_2313 PF00920 Dehydratase family XHV734_2314 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase XHV734_2315 PF02685 Glucokinase XHV734_2316 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain XHV734_2316 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain XHV734_2317 PF00005 ABC transporter XHV734_2317 PF17912 MalK OB fold domain XHV734_2318 PF01571 Aminomethyltransferase folate-binding domain XHV734_2320 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit XHV734_2321 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit XHV734_2322 PF00890 FAD binding domain XHV734_2322 PF02910 Fumarate reductase flavoprotein C-term XHV734_2323 PF13085 2Fe-2S iron-sulfur cluster binding domain XHV734_2324 PF03937 Flavinator of succinate dehydrogenase XHV734_2326 PF02687 FtsX-like permease family XHV734_2326 PF12704 MacB-like periplasmic core domain XHV734_2327 PF00005 ABC transporter XHV734_2329 PF03772 Competence protein XHV734_2329 PF00753 Metallo-beta-lactamase superfamily XHV734_2330 PF01618 MotA/TolQ/ExbB proton channel family XHV734_2332 PF00664 ABC transporter transmembrane region XHV734_2332 PF00005 ABC transporter XHV734_2333 PF02606 Tetraacyldisaccharide-1-P 4'-kinase XHV734_2334 PF02348 Cytidylyltransferase XHV734_2335 PF01451 Low molecular weight phosphotyrosine protein phosphatase XHV734_2337 PF01541 GIY-YIG catalytic domain XHV734_2337 PF08459 UvrC Helix-hairpin-helix N-terminal XHV734_2337 PF02151 UvrB/uvrC motif XHV734_2338 PF01066 CDP-alcohol phosphatidyltransferase XHV734_2339 PF00589 Phage integrase family XHV734_2339 PF13356 Arm DNA-binding domain XHV734_2341 PF01381 Helix-turn-helix XHV734_2342 PF03466 LysR substrate binding domain XHV734_2342 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_2348 PF12705 PD-(D/E)XK nuclease superfamily XHV734_2348 PF00580 UvrD/REP helicase N-terminal domain XHV734_2348 PF13361 UvrD-like helicase C-terminal domain XHV734_2354 PF04610 TrbL/VirB6 plasmid conjugal transfer protein XHV734_2361 PF01527 Transposase XHV734_2362 PF13276 HTH-like domain XHV734_2362 PF13683 Integrase core domain XHV734_2365 PF01527 Transposase XHV734_2368 PF00106 short chain dehydrogenase XHV734_2378 PF04002 RadC-like JAB domain XHV734_2419 PF00145 C-5 cytosine-specific DNA methylase XHV734_2421 PF01751 Toprim domain XHV734_2421 PF01131 DNA topoisomerase XHV734_2422 PF01527 Transposase XHV734_2424 PF01527 Transposase XHV734_2425 PF13276 HTH-like domain XHV734_2425 PF13683 Integrase core domain XHV734_2430 PF00004 ATPase family associated with various cellular activities (AAA) XHV734_2432 PF01648 4'-phosphopantetheinyl transferase superfamily XHV734_2432 PF17837 4'-phosphopantetheinyl transferase N-terminal domain XHV734_2433 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XHV734_2433 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XHV734_2433 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XHV734_2435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XHV734_2437 PF17773 UPF0176 acylphosphatase like domain XHV734_2437 PF00581 Rhodanese-like domain XHV734_2438 PF00196 Bacterial regulatory proteins, luxR family XHV734_2438 PF00072 Response regulator receiver domain XHV734_2439 PF00575 S1 RNA binding domain XHV734_2439 PF10150 Ribonuclease E/G family XHV734_2439 PF12111 Polyribonucleotide phosphorylase C terminal XHV734_2440 PF00849 RNA pseudouridylate synthase XHV734_2440 PF01479 S4 domain XHV734_2441 PF02535 ZIP Zinc transporter XHV734_2458 PF02535 ZIP Zinc transporter XHV734_2460 PF01329 Pterin 4 alpha carbinolamine dehydratase XHV734_2461 PF01106 NifU-like domain XHV734_2471 PF02303 Helix-destabilising protein XHV734_2482 PF01527 Transposase XHV734_2483 PF13276 HTH-like domain XHV734_2483 PF13683 Integrase core domain XHV734_2484 PF00672 HAMP domain XHV734_2484 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XHV734_2484 PF02203 Tar ligand binding domain homologue XHV734_2490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XHV734_2491 PF00196 Bacterial regulatory proteins, luxR family XHV734_2491 PF00072 Response regulator receiver domain XHV734_2492 PF00512 His Kinase A (phospho-acceptor) domain XHV734_2492 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_2493 PF01062 Bestrophin, RFP-TM, chloride channel XHV734_2495 PF07995 Glucose / Sorbosone dehydrogenase XHV734_2499 PF00512 His Kinase A (phospho-acceptor) domain XHV734_2499 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_2499 PF00672 HAMP domain XHV734_2500 PF13426 PAS domain XHV734_2500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_2500 PF00072 Response regulator receiver domain XHV734_2506 PF01494 FAD binding domain XHV734_2508 PF00486 Transcriptional regulatory protein, C terminal XHV734_2508 PF00072 Response regulator receiver domain XHV734_2515 PF03797 Autotransporter beta-domain XHV734_2515 PF00082 Subtilase family XHV734_2516 PF12951 Passenger-associated-transport-repeat XHV734_2518 PF08448 PAS fold XHV734_2518 PF00563 EAL domain XHV734_2518 PF00990 Diguanylate cyclase, GGDEF domain XHV734_2518 PF08447 PAS fold XHV734_2521 PF05974 Domain of unknown function (DUF892) XHV734_2524 PF01266 FAD dependent oxidoreductase XHV734_2526 PF00483 Nucleotidyl transferase XHV734_2528 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase XHV734_2531 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XHV734_2532 PF04879 Molybdopterin oxidoreductase Fe4S4 domain XHV734_2532 PF04324 BFD-like [2Fe-2S] binding domain XHV734_2532 PF00384 Molybdopterin oxidoreductase XHV734_2532 PF01568 Molydopterin dinucleotide binding domain XHV734_2533 PF11723 Homotrimeric ring hydroxylase XHV734_2533 PF00355 Rieske [2Fe-2S] domain XHV734_2534 PF04324 BFD-like [2Fe-2S] binding domain XHV734_2534 PF18267 Rubredoxin NAD+ reductase C-terminal domain XHV734_2534 PF07992 Pyridine nucleotide-disulphide oxidoreductase XHV734_2534 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain XHV734_2534 PF01077 Nitrite and sulphite reductase 4Fe-4S domain XHV734_2535 PF07690 Major Facilitator Superfamily XHV734_2539 PF00072 Response regulator receiver domain XHV734_2539 PF03861 ANTAR domain XHV734_2540 PF10414 Sirohaem synthase dimerisation region XHV734_2540 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XHV734_2540 PF14824 Sirohaem biosynthesis protein central XHV734_2542 PF12804 MobA-like NTP transferase domain XHV734_2543 PF03453 MoeA N-terminal region (domain I and II) XHV734_2543 PF03454 MoeA C-terminal region (domain IV) XHV734_2543 PF00994 Probable molybdopterin binding domain XHV734_2545 PF03372 Endonuclease/Exonuclease/phosphatase family XHV734_2547 PF00899 ThiF family XHV734_2548 PF03454 MoeA C-terminal region (domain IV) XHV734_2548 PF00994 Probable molybdopterin binding domain XHV734_2548 PF03453 MoeA N-terminal region (domain I and II) XHV734_2549 PF01926 50S ribosome-binding GTPase XHV734_2549 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal XHV734_2550 PF13360 PQQ-like domain XHV734_2550 PF01011 PQQ enzyme repeat XHV734_2552 PF13464 Domain of unknown function (DUF4115) XHV734_2554 PF04055 Radical SAM superfamily XHV734_2555 PF00334 Nucleoside diphosphate kinase XHV734_2557 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XHV734_2557 PF00378 Enoyl-CoA hydratase/isomerase XHV734_2557 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XHV734_2558 PF02803 Thiolase, C-terminal domain XHV734_2558 PF00108 Thiolase, N-terminal domain XHV734_2559 PF02537 CrcB-like protein, Camphor Resistance (CrcB) XHV734_2560 PF16193 AAA C-terminal domain XHV734_2560 PF00004 ATPase family associated with various cellular activities (AAA) XHV734_2560 PF12002 MgsA AAA+ ATPase C terminal XHV734_2561 PF03548 Outer membrane lipoprotein carrier protein LolA XHV734_2564 PF13491 4TM region of DNA translocase FtsK/SpoIIIE XHV734_2564 PF17854 FtsK alpha domain XHV734_2564 PF09397 Ftsk gamma domain XHV734_2564 PF01580 FtsK/SpoIIIE family XHV734_2565 PF07992 Pyridine nucleotide-disulphide oxidoreductase XHV734_2568 PF03588 Leucyl/phenylalanyl-tRNA protein transferase XHV734_2569 PF01176 Translation initiation factor 1A / IF-1 XHV734_2570 PF00004 ATPase family associated with various cellular activities (AAA) XHV734_2570 PF17871 AAA lid domain XHV734_2570 PF02861 Clp amino terminal domain, pathogenicity island component XHV734_2570 PF07724 AAA domain (Cdc48 subfamily) XHV734_2570 PF10431 C-terminal, D2-small domain, of ClpB protein XHV734_2571 PF02617 ATP-dependent Clp protease adaptor protein ClpS XHV734_2573 PF00293 NUDIX domain XHV734_2575 PF04356 Protein of unknown function (DUF489) XHV734_2576 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XHV734_2576 PF12729 Four helix bundle sensory module for signal transduction XHV734_2576 PF00672 HAMP domain XHV734_2581 PF00563 EAL domain XHV734_2581 PF00990 Diguanylate cyclase, GGDEF domain XHV734_2581 PF03707 Bacterial signalling protein N terminal repeat XHV734_2582 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_2582 PF07730 Histidine kinase XHV734_2583 PF00563 EAL domain XHV734_2583 PF03707 Bacterial signalling protein N terminal repeat XHV734_2583 PF00990 Diguanylate cyclase, GGDEF domain XHV734_2584 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_2584 PF00512 His Kinase A (phospho-acceptor) domain XHV734_2588 PF00072 Response regulator receiver domain XHV734_2588 PF01584 CheW-like domain XHV734_2590 PF00460 Flagella basal body rod protein XHV734_2590 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XHV734_2591 PF03963 Flagellar hook capping protein - N-terminal region XHV734_2592 PF07559 Flagellar basal body protein FlaE XHV734_2592 PF00460 Flagella basal body rod protein XHV734_2592 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XHV734_2593 PF00460 Flagella basal body rod protein XHV734_2593 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XHV734_2595 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XHV734_2595 PF00460 Flagella basal body rod protein XHV734_2596 PF02107 Flagellar L-ring protein XHV734_2597 PF02119 Flagellar P-ring protein XHV734_2598 PF10135 Rod binding protein XHV734_2598 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase XHV734_2599 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XHV734_2599 PF07196 Flagellin hook IN motif XHV734_2602 PF00700 Bacterial flagellin C-terminal helical region XHV734_2602 PF00669 Bacterial flagellin N-terminal helical region XHV734_2603 PF07195 Flagellar hook-associated protein 2 C-terminus XHV734_2603 PF07196 Flagellin hook IN motif XHV734_2603 PF02465 Flagellar hook-associated protein 2 N-terminus XHV734_2604 PF02561 Flagellar protein FliS XHV734_2607 PF00196 Bacterial regulatory proteins, luxR family XHV734_2607 PF00072 Response regulator receiver domain XHV734_2608 PF04963 Sigma-54 factor, core binding domain XHV734_2608 PF04552 Sigma-54, DNA binding domain XHV734_2608 PF00309 Sigma-54 factor, Activator interacting domain (AID) XHV734_2609 PF01339 CheB methylesterase XHV734_2609 PF00072 Response regulator receiver domain XHV734_2610 PF02954 Bacterial regulatory protein, Fis family XHV734_2610 PF06490 Flagellar regulatory protein FleQ XHV734_2610 PF00158 Sigma-54 interaction domain XHV734_2611 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XHV734_2613 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XHV734_2613 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XHV734_2620 PF04230 Polysaccharide pyruvyl transferase XHV734_2623 PF00534 Glycosyl transferases group 1 XHV734_2623 PF00535 Glycosyl transferase family 2 XHV734_2625 PF02049 Flagellar hook-basal body complex protein FliE XHV734_2626 PF08345 Flagellar M-ring protein C-terminal XHV734_2626 PF01514 Secretory protein of YscJ/FliF family XHV734_2627 PF14842 FliG N-terminal domain XHV734_2627 PF14841 FliG middle domain XHV734_2627 PF01706 FliG C-terminal domain XHV734_2629 PF18269 T3SS EscN ATPase C-terminal domain XHV734_2629 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XHV734_2633 PF02154 Flagellar motor switch protein FliM XHV734_2633 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term XHV734_2634 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term XHV734_2635 PF04347 Flagellar biosynthesis protein, FliO XHV734_2636 PF00813 FliP family XHV734_2637 PF01313 Bacterial export proteins, family 3 XHV734_2638 PF01311 Bacterial export proteins, family 1 XHV734_2639 PF00563 EAL domain XHV734_2639 PF03707 Bacterial signalling protein N terminal repeat XHV734_2639 PF13188 PAS domain XHV734_2639 PF00990 Diguanylate cyclase, GGDEF domain XHV734_2641 PF00990 Diguanylate cyclase, GGDEF domain XHV734_2642 PF00990 Diguanylate cyclase, GGDEF domain XHV734_2642 PF00563 EAL domain XHV734_2642 PF03707 Bacterial signalling protein N terminal repeat XHV734_2643 PF01312 FlhB HrpN YscU SpaS Family XHV734_2644 PF00771 FHIPEP family XHV734_2646 PF00448 SRP54-type protein, GTPase domain XHV734_2647 PF10609 NUBPL iron-transfer P-loop NTPase XHV734_2648 PF04542 Sigma-70 region 2 XHV734_2648 PF04539 Sigma-70 region 3 XHV734_2648 PF04545 Sigma-70, region 4 XHV734_2649 PF00072 Response regulator receiver domain XHV734_2650 PF04344 Chemotaxis phosphatase, CheZ XHV734_2651 PF01627 Hpt domain XHV734_2651 PF00072 Response regulator receiver domain XHV734_2651 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_2651 PF02895 Signal transducing histidine kinase, homodimeric domain XHV734_2651 PF01584 CheW-like domain XHV734_2652 PF01381 Helix-turn-helix XHV734_2655 PF01618 MotA/TolQ/ExbB proton channel family XHV734_2656 PF13677 Membrane MotB of proton-channel complex MotA/MotB XHV734_2656 PF00691 OmpA family XHV734_2657 PF13614 AAA domain XHV734_2658 PF01584 CheW-like domain XHV734_2660 PF00072 Response regulator receiver domain XHV734_2661 PF01627 Hpt domain XHV734_2661 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_2661 PF02895 Signal transducing histidine kinase, homodimeric domain XHV734_2661 PF09078 CheY binding XHV734_2661 PF01584 CheW-like domain XHV734_2663 PF00672 HAMP domain XHV734_2663 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XHV734_2663 PF02203 Tar ligand binding domain homologue XHV734_2665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XHV734_2665 PF17200 Single Cache domain 2 XHV734_2665 PF00672 HAMP domain XHV734_2665 PF17200 Single Cache domain 2 XHV734_2665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XHV734_2665 PF00672 HAMP domain XHV734_2666 PF00672 HAMP domain XHV734_2666 PF02203 Tar ligand binding domain homologue XHV734_2666 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XHV734_2667 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XHV734_2667 PF00672 HAMP domain XHV734_2669 PF00672 HAMP domain XHV734_2669 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XHV734_2669 PF02203 Tar ligand binding domain homologue XHV734_2671 PF00672 HAMP domain XHV734_2671 PF02203 Tar ligand binding domain homologue XHV734_2671 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XHV734_2673 PF00672 HAMP domain XHV734_2673 PF02203 Tar ligand binding domain homologue XHV734_2673 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XHV734_2674 PF02203 Tar ligand binding domain homologue XHV734_2674 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XHV734_2674 PF00672 HAMP domain XHV734_2675 PF02203 Tar ligand binding domain homologue XHV734_2675 PF00672 HAMP domain XHV734_2675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XHV734_2677 PF07317 Flagellar regulator YcgR XHV734_2677 PF07238 PilZ domain XHV734_2678 PF01584 CheW-like domain XHV734_2680 PF02203 Tar ligand binding domain homologue XHV734_2680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XHV734_2680 PF00672 HAMP domain XHV734_2682 PF03705 CheR methyltransferase, all-alpha domain XHV734_2682 PF01739 CheR methyltransferase, SAM binding domain XHV734_2683 PF03975 CheD chemotactic sensory transduction XHV734_2684 PF00072 Response regulator receiver domain XHV734_2684 PF01339 CheB methylesterase XHV734_2685 PF00563 EAL domain XHV734_2685 PF00990 Diguanylate cyclase, GGDEF domain XHV734_2685 PF03707 Bacterial signalling protein N terminal repeat XHV734_2687 PF00561 alpha/beta hydrolase fold XHV734_2688 PF00330 Aconitase family (aconitate hydratase) XHV734_2688 PF11791 Aconitate B N-terminal domain XHV734_2688 PF06434 Aconitate hydratase 2 N-terminus XHV734_2691 PF00694 Aconitase C-terminal domain XHV734_2691 PF00330 Aconitase family (aconitate hydratase) XHV734_2692 PF13193 AMP-binding enzyme C-terminal domain XHV734_2692 PF00501 AMP-binding enzyme XHV734_2694 PF00072 Response regulator receiver domain XHV734_2694 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_2694 PF00512 His Kinase A (phospho-acceptor) domain XHV734_2694 PF01627 Hpt domain XHV734_2695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_2695 PF00512 His Kinase A (phospho-acceptor) domain XHV734_2695 PF00072 Response regulator receiver domain XHV734_2695 PF01627 Hpt domain XHV734_2696 PF00072 Response regulator receiver domain XHV734_2697 PF01336 OB-fold nucleic acid binding domain XHV734_2697 PF00152 tRNA synthetases class II (D, K and N) XHV734_2698 PF03462 PCRF domain XHV734_2698 PF00472 RF-1 domain XHV734_2699 PF00472 RF-1 domain XHV734_2699 PF03462 PCRF domain XHV734_2700 PF04397 LytTr DNA-binding domain XHV734_2700 PF00072 Response regulator receiver domain XHV734_2704 PF02272 DHHA1 domain XHV734_2704 PF17768 RecJ OB domain XHV734_2704 PF01368 DHH family XHV734_2706 PF01272 Transcription elongation factor, GreA/GreB, C-term XHV734_2706 PF03449 Transcription elongation factor, N-terminal XHV734_2707 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XHV734_2707 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain XHV734_2707 PF02142 MGS-like domain XHV734_2709 PF00117 Glutamine amidotransferase class-I XHV734_2709 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain XHV734_2710 PF01113 Dihydrodipicolinate reductase, N-terminus XHV734_2710 PF05173 Dihydrodipicolinate reductase, C-terminus XHV734_2711 PF03473 MOSC domain XHV734_2711 PF03475 3-alpha domain XHV734_2712 PF00155 Aminotransferase class I and II XHV734_2714 PF07664 Ferrous iron transport protein B C terminus XHV734_2714 PF02421 Ferrous iron transport protein B XHV734_2714 PF07670 Nucleoside recognition XHV734_2716 PF00378 Enoyl-CoA hydratase/isomerase XHV734_2717 PF00682 HMGL-like XHV734_2718 PF00106 short chain dehydrogenase XHV734_2719 PF09285 Elongation factor P, C-terminal XHV734_2719 PF01132 Elongation factor P (EF-P) OB domain XHV734_2719 PF08207 Elongation factor P (EF-P) KOW-like domain XHV734_2724 PF01565 FAD binding domain XHV734_2724 PF02913 FAD linked oxidases, C-terminal domain XHV734_2726 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XHV734_2726 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XHV734_2731 PF13520 Amino acid permease XHV734_2732 PF13520 Amino acid permease XHV734_2735 PF00596 Class II Aldolase and Adducin N-terminal domain XHV734_2736 PF03079 ARD/ARD' family XHV734_2741 PF01502 Phosphoribosyl-AMP cyclohydrolase XHV734_2741 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase XHV734_2742 PF00977 Histidine biosynthesis protein XHV734_2743 PF00977 Histidine biosynthesis protein XHV734_2744 PF00117 Glutamine amidotransferase class-I XHV734_2745 PF00475 Imidazoleglycerol-phosphate dehydratase XHV734_2746 PF00155 Aminotransferase class I and II XHV734_2747 PF00815 Histidinol dehydrogenase XHV734_2748 PF01634 ATP phosphoribosyltransferase XHV734_2748 PF08029 HisG, C-terminal domain XHV734_2751 PF13393 Histidyl-tRNA synthetase XHV734_2751 PF03129 Anticodon binding domain XHV734_2753 PF00027 Cyclic nucleotide-binding domain XHV734_2753 PF13545 Crp-like helix-turn-helix domain XHV734_2755 PF14821 Threonine synthase N terminus XHV734_2755 PF00291 Pyridoxal-phosphate dependent enzyme XHV734_2758 PF00288 GHMP kinases N terminal domain XHV734_2758 PF08544 GHMP kinases C terminal XHV734_2759 PF03447 Homoserine dehydrogenase, NAD binding domain XHV734_2759 PF00742 Homoserine dehydrogenase XHV734_2759 PF13840 ACT domain XHV734_2759 PF01842 ACT domain XHV734_2759 PF00696 Amino acid kinase family XHV734_2761 PF03073 TspO/MBR family XHV734_2762 PF13332 Hemagglutinin repeat XHV734_2762 PF05594 Haemagluttinin repeat XHV734_2762 PF13018 Extended Signal Peptide of Type V secretion system XHV734_2762 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain XHV734_2762 PF05860 haemagglutination activity domain XHV734_2770 PF04829 Pre-toxin domain with VENN motif XHV734_2770 PF15605 Bacterial toxin 28 XHV734_2770 PF05860 haemagglutination activity domain XHV734_2770 PF13332 Hemagglutinin repeat XHV734_2770 PF04829 Pre-toxin domain with VENN motif XHV734_2770 PF15605 Bacterial toxin 28 XHV734_2770 PF13332 Hemagglutinin repeat XHV734_2770 PF05860 haemagglutination activity domain XHV734_2771 PF08479 POTRA domain, ShlB-type XHV734_2771 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB XHV734_2771 PF17287 POTRA domain XHV734_2773 PF14883 Hypothetical glycosyl hydrolase family 13 XHV734_2773 PF01522 Polysaccharide deacetylase XHV734_2775 PF13276 HTH-like domain XHV734_2775 PF13683 Integrase core domain XHV734_2776 PF01527 Transposase XHV734_2786 PF01527 Transposase XHV734_2787 PF13276 HTH-like domain XHV734_2787 PF13333 Integrase core domain XHV734_2787 PF13276 HTH-like domain XHV734_2787 PF13333 Integrase core domain XHV734_2787 PF00665 Integrase core domain XHV734_2787 PF00665 Integrase core domain XHV734_2799 PF14461 Prokaryotic E2 family B XHV734_2799 PF00899 ThiF family XHV734_2801 PF01734 Patatin-like phospholipase XHV734_2810 PF00171 Aldehyde dehydrogenase family XHV734_2813 PF01180 Dihydroorotate dehydrogenase XHV734_2814 PF01565 FAD binding domain XHV734_2814 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain XHV734_2815 PF00892 EamA-like transporter family XHV734_2816 PF07690 Major Facilitator Superfamily XHV734_2817 PF01569 PAP2 superfamily XHV734_2818 PF04551 GcpE protein XHV734_2820 PF00072 Response regulator receiver domain XHV734_2822 PF02013 Cellulose or protein binding domain XHV734_2822 PF00150 Cellulase (glycosyl hydrolase family 5) XHV734_2823 PF00360 Phytochrome region XHV734_2823 PF01590 GAF domain XHV734_2823 PF00990 Diguanylate cyclase, GGDEF domain XHV734_2823 PF00563 EAL domain XHV734_2824 PF00474 Sodium:solute symporter family XHV734_2825 PF14310 Fibronectin type III-like domain XHV734_2825 PF01915 Glycosyl hydrolase family 3 C-terminal domain XHV734_2825 PF00933 Glycosyl hydrolase family 3 N terminal domain XHV734_2829 PF00342 Phosphoglucose isomerase XHV734_2830 PF02261 Aspartate decarboxylase XHV734_2831 PF02569 Pantoate-beta-alanine ligase XHV734_2832 PF02548 Ketopantoate hydroxymethyltransferase XHV734_2833 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) XHV734_2834 PF01743 Poly A polymerase head domain XHV734_2834 PF12626 Polymerase A arginine-rich C-terminus XHV734_2834 PF12627 Probable RNA and SrmB- binding site of polymerase A XHV734_2836 PF02649 Type I GTP cyclohydrolase folE2 XHV734_2837 PF01520 N-acetylmuramoyl-L-alanine amidase XHV734_2841 PF00083 Sugar (and other) transporter XHV734_2843 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XHV734_2843 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XHV734_2845 PF16338 Domain of unknown function (DUF4968) XHV734_2845 PF17137 Domain of unknown function (DUF5110) XHV734_2845 PF01055 Glycosyl hydrolases family 31 XHV734_2848 PF00942 Cellulose binding domain XHV734_2848 PF03442 Carbohydrate binding domain X2 XHV734_2851 PF03466 LysR substrate binding domain XHV734_2851 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_2852 PF01081 KDPG and KHG aldolase XHV734_2853 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XHV734_2853 PF13378 Enolase C-terminal domain-like XHV734_2854 PF08450 SMP-30/Gluconolactonase/LRE-like region XHV734_2857 PF11953 Domain of unknown function (DUF3470) XHV734_2857 PF00037 4Fe-4S binding domain XHV734_2860 PF00701 Dihydrodipicolinate synthetase family XHV734_2863 PF00578 AhpC/TSA family XHV734_2864 PF02562 PhoH-like protein XHV734_2864 PF13638 PIN domain XHV734_2867 PF02581 Thiamine monophosphate synthase XHV734_2867 PF08543 Phosphomethylpyrimidine kinase XHV734_2871 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_2871 PF03466 LysR substrate binding domain XHV734_2872 PF17954 Quercetinase C-terminal cupin domain XHV734_2872 PF02678 Pirin XHV734_2874 PF13426 PAS domain XHV734_2874 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XHV734_2874 PF08447 PAS fold XHV734_2876 PF02599 Global regulator protein family XHV734_2877 PF02272 DHHA1 domain XHV734_2877 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XHV734_2877 PF01411 tRNA synthetases class II (A) XHV734_2878 PF02631 RecX family XHV734_2879 PF00154 recA bacterial DNA recombination protein XHV734_2880 PF01726 LexA DNA binding domain XHV734_2880 PF00717 Peptidase S24-like XHV734_2881 PF03109 ABC1 family XHV734_2883 PF00593 TonB dependent receptor XHV734_2883 PF07715 TonB-dependent Receptor Plug Domain XHV734_2884 PF02464 Competence-damaged protein XHV734_2885 PF01926 50S ribosome-binding GTPase XHV734_2885 PF16360 GTP-binding GTPase Middle Region XHV734_2885 PF13167 GTP-binding GTPase N-terminal XHV734_2886 PF17209 Hfq protein XHV734_2888 PF00809 Pterin binding enzyme XHV734_2889 PF01434 Peptidase family M41 XHV734_2889 PF06480 FtsH Extracellular XHV734_2889 PF17862 AAA+ lid domain XHV734_2889 PF00004 ATPase family associated with various cellular activities (AAA) XHV734_2890 PF01728 FtsJ-like methyltransferase XHV734_2892 PF01985 CRS1 / YhbY (CRM) domain XHV734_2894 PF01551 Peptidase family M23 XHV734_2894 PF01476 LysM domain XHV734_2895 PF09335 SNARE associated Golgi protein XHV734_2897 PF01975 Survival protein SurE XHV734_2898 PF01713 Smr domain XHV734_2899 PF01142 tRNA pseudouridine synthase D (TruD) XHV734_2900 PF02542 YgbB family XHV734_2901 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase XHV734_2902 PF04977 Septum formation initiator XHV734_2903 PF03952 Enolase, N-terminal domain XHV734_2903 PF00113 Enolase, C-terminal TIM barrel domain XHV734_2905 PF00793 DAHP synthetase I family XHV734_2906 PF00117 Glutamine amidotransferase class-I XHV734_2906 PF06418 CTP synthase N-terminus XHV734_2909 PF00986 DNA gyrase B subunit, carboxyl terminus XHV734_2909 PF01751 Toprim domain XHV734_2909 PF00204 DNA gyrase B XHV734_2909 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_2913 PF01384 Phosphate transporter family XHV734_2915 PF03471 Transporter associated domain XHV734_2915 PF00571 CBS domain XHV734_2915 PF01595 Cyclin M transmembrane N-terminal domain XHV734_2918 PF00296 Luciferase-like monooxygenase XHV734_2920 PF07690 Major Facilitator Superfamily XHV734_2923 PF00005 ABC transporter XHV734_2923 PF00664 ABC transporter transmembrane region XHV734_2924 PF06745 KaiC XHV734_2929 PF13579 Glycosyl transferase 4-like domain XHV734_2929 PF00534 Glycosyl transferases group 1 XHV734_2930 PF13439 Glycosyltransferase Family 4 XHV734_2930 PF00534 Glycosyl transferases group 1 XHV734_2936 PF00535 Glycosyl transferase family 2 XHV734_2937 PF01943 Polysaccharide biosynthesis protein XHV734_2938 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XHV734_2939 PF05523 WxcM-like, C-terminal XHV734_2942 PF00034 Cytochrome c XHV734_2945 PF08281 Sigma-70, region 4 XHV734_2945 PF04542 Sigma-70 region 2 XHV734_2947 PF00082 Subtilase family XHV734_2948 PF01578 Cytochrome C assembly protein XHV734_2949 PF04995 Heme exporter protein D (CcmD) XHV734_2950 PF03100 CcmE XHV734_2951 PF01578 Cytochrome C assembly protein XHV734_2951 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal XHV734_2952 PF08534 Redoxin XHV734_2953 PF03918 Cytochrome C biogenesis protein XHV734_2962 PF13419 Haloacid dehalogenase-like hydrolase XHV734_2969 PF12804 MobA-like NTP transferase domain XHV734_2970 PF13478 XdhC Rossmann domain XHV734_2970 PF02625 XdhC and CoxI family XHV734_2971 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase XHV734_2971 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XHV734_2972 PF03450 CO dehydrogenase flavoprotein C-terminal domain XHV734_2972 PF00941 FAD binding domain in molybdopterin dehydrogenase XHV734_2973 PF10518 TAT (twin-arginine translocation) pathway signal sequence XHV734_2973 PF01799 [2Fe-2S] binding domain XHV734_2973 PF00111 2Fe-2S iron-sulfur cluster binding domain XHV734_2974 PF01590 GAF domain XHV734_2974 PF00990 Diguanylate cyclase, GGDEF domain XHV734_2974 PF00360 Phytochrome region XHV734_2974 PF00563 EAL domain XHV734_2976 PF04052 TolB amino-terminal domain XHV734_2976 PF07676 WD40-like Beta Propeller Repeat XHV734_2977 PF07715 TonB-dependent Receptor Plug Domain XHV734_2977 PF00593 TonB dependent receptor XHV734_2979 PF00436 Single-strand binding protein family XHV734_2980 PF00348 Polyprenyl synthetase XHV734_2981 PF08245 Mur ligase middle domain XHV734_2984 PF01842 ACT domain XHV734_2984 PF00696 Amino acid kinase family XHV734_2985 PF02567 Phenazine biosynthesis-like protein XHV734_2986 PF02567 Phenazine biosynthesis-like protein XHV734_2988 PF02566 OsmC-like protein XHV734_2989 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XHV734_2989 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XHV734_2990 PF03652 Holliday junction resolvase XHV734_2991 PF02622 Uncharacterized ACR, COG1678 XHV734_2992 PF13673 Acetyltransferase (GNAT) domain XHV734_2992 PF13302 Acetyltransferase (GNAT) domain XHV734_2992 PF00117 Glutamine amidotransferase class-I XHV734_2992 PF00958 GMP synthase C terminal domain XHV734_2992 PF03352 Methyladenine glycosylase XHV734_2994 PF00437 Type II/IV secretion system protein XHV734_2995 PF00437 Type II/IV secretion system protein XHV734_2997 PF01168 Alanine racemase, N-terminal domain XHV734_2998 PF14748 Pyrroline-5-carboxylate reductase dimerisation XHV734_2998 PF03807 NADP oxidoreductase coenzyme F420-dependent XHV734_3001 PF01476 LysM domain XHV734_3001 PF01551 Peptidase family M23 XHV734_3008 PF02082 Transcriptional regulator XHV734_3009 PF01458 Uncharacterized protein family (UPF0051) XHV734_3010 PF00005 ABC transporter XHV734_3011 PF01458 Uncharacterized protein family (UPF0051) XHV734_3012 PF00266 Aminotransferase class-V XHV734_3014 PF00583 Acetyltransferase (GNAT) family XHV734_3015 PF00355 Rieske [2Fe-2S] domain XHV734_3016 PF00593 TonB dependent receptor XHV734_3016 PF07715 TonB-dependent Receptor Plug Domain XHV734_3017 PF13640 2OG-Fe(II) oxygenase superfamily XHV734_3017 PF18331 PKHD-type hydroxylase C-terminal domain XHV734_3022 PF02424 ApbE family XHV734_3023 PF00175 Oxidoreductase NAD-binding domain XHV734_3023 PF00667 FAD binding domain XHV734_3023 PF00258 Flavodoxin XHV734_3027 PF01546 Peptidase family M20/M25/M40 XHV734_3027 PF07687 Peptidase dimerisation domain XHV734_3029 PF01636 Phosphotransferase enzyme family XHV734_3030 PF00483 Nucleotidyl transferase XHV734_3036 PF03989 DNA gyrase C-terminal domain, beta-propeller XHV734_3036 PF00521 DNA gyrase/topoisomerase IV, subunit A XHV734_3037 PF01008 Initiation factor 2 subunit family XHV734_3039 PF00152 tRNA synthetases class II (D, K and N) XHV734_3040 PF03119 NAD-dependent DNA ligase C4 zinc finger domain XHV734_3040 PF03120 NAD-dependent DNA ligase OB-fold domain XHV734_3040 PF12826 Helix-hairpin-helix motif XHV734_3040 PF01653 NAD-dependent DNA ligase adenylation domain XHV734_3040 PF00533 BRCA1 C Terminus (BRCT) domain XHV734_3041 PF00155 Aminotransferase class I and II XHV734_3042 PF04354 ZipA, C-terminal FtsZ-binding domain XHV734_3043 PF02463 RecF/RecN/SMC N terminal domain XHV734_3044 PF01281 Ribosomal protein L9, N-terminal domain XHV734_3044 PF03948 Ribosomal protein L9, C-terminal domain XHV734_3045 PF01084 Ribosomal protein S18 XHV734_3046 PF01250 Ribosomal protein S6 XHV734_3047 PF01521 Iron-sulphur cluster biosynthesis XHV734_3048 PF00152 tRNA synthetases class II (D, K and N) XHV734_3048 PF01336 OB-fold nucleic acid binding domain XHV734_3051 PF04299 Putative FMN-binding domain XHV734_3052 PF00484 Carbonic anhydrase XHV734_3053 PF06052 3-hydroxyanthranilic acid dioxygenase XHV734_3055 PF00266 Aminotransferase class-V XHV734_3056 PF01494 FAD binding domain XHV734_3057 PF00929 Exonuclease XHV734_3057 PF08411 Exonuclease C-terminal XHV734_3062 PF01513 ATP-NAD kinase XHV734_3063 PF01170 Putative RNA methylase family UPF0020 XHV734_3063 PF02926 THUMP domain XHV734_3063 PF10672 S-adenosylmethionine-dependent methyltransferase XHV734_3064 PF16326 ABC transporter C-terminal domain XHV734_3064 PF12848 ABC transporter XHV734_3064 PF00005 ABC transporter XHV734_3070 PF00581 Rhodanese-like domain XHV734_3071 PF00293 NUDIX domain XHV734_3072 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase XHV734_3072 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XHV734_3073 PF00378 Enoyl-CoA hydratase/isomerase XHV734_3075 PF00730 HhH-GPD superfamily base excision DNA repair protein XHV734_3075 PF00633 Helix-hairpin-helix motif XHV734_3075 PF10576 Iron-sulfur binding domain of endonuclease III XHV734_3079 PF00916 Sulfate permease family XHV734_3079 PF01740 STAS domain XHV734_3080 PF00484 Carbonic anhydrase XHV734_3083 PF12849 PBP superfamily domain XHV734_3084 PF12849 PBP superfamily domain XHV734_3085 PF00528 Binding-protein-dependent transport system inner membrane component XHV734_3086 PF00528 Binding-protein-dependent transport system inner membrane component XHV734_3087 PF00005 ABC transporter XHV734_3088 PF01895 PhoU domain XHV734_3091 PF00929 Exonuclease XHV734_3092 PF00990 Diguanylate cyclase, GGDEF domain XHV734_3094 PF08032 RNA 2'-O ribose methyltransferase substrate binding XHV734_3094 PF00588 SpoU rRNA Methylase family XHV734_3096 PF08206 Ribonuclease B OB domain XHV734_3096 PF00773 RNB domain XHV734_3096 PF00575 S1 RNA binding domain XHV734_3096 PF08461 Ribonuclease R winged-helix domain XHV734_3096 PF17876 Cold shock domain XHV734_3099 PF05598 Transposase domain (DUF772) XHV734_3099 PF01609 Transposase DDE domain XHV734_3100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XHV734_3100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XHV734_3100 PF02770 Acyl-CoA dehydrogenase, middle domain XHV734_3101 PF01209 ubiE/COQ5 methyltransferase family XHV734_3107 PF00294 pfkB family carbohydrate kinase XHV734_3108 PF07690 Major Facilitator Superfamily XHV734_3109 PF00356 Bacterial regulatory proteins, lacI family XHV734_3112 PF04102 SlyX XHV734_3113 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XHV734_3113 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XHV734_3113 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XHV734_3114 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase XHV734_3114 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XHV734_3116 PF00255 Glutathione peroxidase XHV734_3118 PF00392 Bacterial regulatory proteins, gntR family XHV734_3119 PF00005 ABC transporter XHV734_3124 PF10415 Fumarase C C-terminus XHV734_3124 PF00206 Lyase XHV734_3125 PF03471 Transporter associated domain XHV734_3125 PF00571 CBS domain XHV734_3125 PF01595 Cyclin M transmembrane N-terminal domain XHV734_3126 PF08328 Adenylosuccinate lyase C-terminal XHV734_3126 PF00206 Lyase XHV734_3129 PF08007 Cupin superfamily protein XHV734_3131 PF16870 2-oxoglutarate dehydrogenase C-terminal XHV734_3131 PF02779 Transketolase, pyrimidine binding domain XHV734_3131 PF00676 Dehydrogenase E1 component XHV734_3131 PF16078 2-oxoglutarate dehydrogenase N-terminus XHV734_3132 PF02817 e3 binding domain XHV734_3132 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XHV734_3132 PF00364 Biotin-requiring enzyme XHV734_3133 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XHV734_3133 PF07992 Pyridine nucleotide-disulphide oxidoreductase XHV734_3134 PF03641 Possible lysine decarboxylase XHV734_3135 PF01205 Uncharacterized protein family UPF0029 XHV734_3136 PF00664 ABC transporter transmembrane region XHV734_3136 PF00005 ABC transporter XHV734_3137 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_3137 PF03466 LysR substrate binding domain XHV734_3138 PF03412 Peptidase C39 family XHV734_3138 PF00005 ABC transporter XHV734_3138 PF00664 ABC transporter transmembrane region XHV734_3144 PF08543 Phosphomethylpyrimidine kinase XHV734_3145 PF00684 DnaJ central domain XHV734_3145 PF01556 DnaJ C terminal domain XHV734_3145 PF00226 DnaJ domain XHV734_3146 PF00012 Hsp70 protein XHV734_3147 PF01025 GrpE XHV734_3148 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding XHV734_3148 PF01628 HrcA protein C terminal domain XHV734_3149 PF02463 RecF/RecN/SMC N terminal domain XHV734_3150 PF01475 Ferric uptake regulator family XHV734_3151 PF04355 SmpA / OmlA family XHV734_3152 PF03658 RnfH family Ubiquitin XHV734_3154 PF01668 SmpB protein XHV734_3155 PF00082 Subtilase family XHV734_3163 PF05598 Transposase domain (DUF772) XHV734_3163 PF01609 Transposase DDE domain XHV734_3173 PF00990 Diguanylate cyclase, GGDEF domain XHV734_3175 PF00990 Diguanylate cyclase, GGDEF domain XHV734_3176 PF02321 Outer membrane efflux protein XHV734_3177 PF00106 short chain dehydrogenase XHV734_3178 PF00873 AcrB/AcrD/AcrF family XHV734_3179 PF00529 HlyD membrane-fusion protein of T1SS XHV734_3179 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XHV734_3182 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_3182 PF03466 LysR substrate binding domain XHV734_3184 PF04070 Domain of unknown function (DUF378) XHV734_3188 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_3188 PF03466 LysR substrate binding domain XHV734_3196 PF00664 ABC transporter transmembrane region XHV734_3196 PF00005 ABC transporter XHV734_3198 PF00999 Sodium/hydrogen exchanger family XHV734_3199 PF00144 Beta-lactamase XHV734_3202 PF03737 Aldolase/RraA XHV734_3207 PF00990 Diguanylate cyclase, GGDEF domain XHV734_3208 PF00849 RNA pseudouridylate synthase XHV734_3208 PF01479 S4 domain XHV734_3209 PF00990 Diguanylate cyclase, GGDEF domain XHV734_3209 PF00563 EAL domain XHV734_3209 PF08448 PAS fold XHV734_3210 PF00270 DEAD/DEAH box helicase XHV734_3210 PF03880 DbpA RNA binding domain XHV734_3210 PF00271 Helicase conserved C-terminal domain XHV734_3211 PF08281 Sigma-70, region 4 XHV734_3211 PF04542 Sigma-70 region 2 XHV734_3215 PF01494 FAD binding domain XHV734_3222 PF02805 Metal binding domain of Ada XHV734_3222 PF06029 AlkA N-terminal domain XHV734_3222 PF00730 HhH-GPD superfamily base excision DNA repair protein XHV734_3222 PF12833 Helix-turn-helix domain XHV734_3223 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain XHV734_3223 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain XHV734_3225 PF00654 Voltage gated chloride channel XHV734_3228 PF07715 TonB-dependent Receptor Plug Domain XHV734_3228 PF00593 TonB dependent receptor XHV734_3235 PF00082 Subtilase family XHV734_3237 PF13860 FlgD Ig-like domain XHV734_3237 PF02225 PA domain XHV734_3237 PF05922 Peptidase inhibitor I9 XHV734_3237 PF00082 Subtilase family XHV734_3238 PF00248 Aldo/keto reductase family XHV734_3239 PF07690 Major Facilitator Superfamily XHV734_3240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_3240 PF03466 LysR substrate binding domain XHV734_3245 PF03466 LysR substrate binding domain XHV734_3245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_3246 PF00248 Aldo/keto reductase family XHV734_3247 PF16859 Tetracyclin repressor-like, C-terminal domain XHV734_3247 PF00440 Bacterial regulatory proteins, tetR family XHV734_3248 PF02321 Outer membrane efflux protein XHV734_3249 PF00873 AcrB/AcrD/AcrF family XHV734_3250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XHV734_3250 PF00529 HlyD membrane-fusion protein of T1SS XHV734_3252 PF01475 Ferric uptake regulator family XHV734_3253 PF00749 tRNA synthetases class I (E and Q), catalytic domain XHV734_3258 PF06123 Inner membrane protein CreD XHV734_3261 PF00672 HAMP domain XHV734_3261 PF00512 His Kinase A (phospho-acceptor) domain XHV734_3261 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_3262 PF00486 Transcriptional regulatory protein, C terminal XHV734_3262 PF00072 Response regulator receiver domain XHV734_3263 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ XHV734_3265 PF02559 CarD-like/TRCF domain XHV734_3265 PF00270 DEAD/DEAH box helicase XHV734_3265 PF00271 Helicase conserved C-terminal domain XHV734_3265 PF03461 TRCF domain XHV734_3265 PF17757 UvrB interaction domain XHV734_3266 PF01609 Transposase DDE domain XHV734_3266 PF05598 Transposase domain (DUF772) XHV734_3269 PF02895 Signal transducing histidine kinase, homodimeric domain XHV734_3269 PF09078 CheY binding XHV734_3269 PF01627 Hpt domain XHV734_3269 PF01584 CheW-like domain XHV734_3269 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_3270 PF02203 Tar ligand binding domain homologue XHV734_3270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XHV734_3270 PF00672 HAMP domain XHV734_3271 PF01584 CheW-like domain XHV734_3272 PF03707 Bacterial signalling protein N terminal repeat XHV734_3272 PF00990 Diguanylate cyclase, GGDEF domain XHV734_3272 PF00563 EAL domain XHV734_3273 PF01739 CheR methyltransferase, SAM binding domain XHV734_3273 PF03705 CheR methyltransferase, all-alpha domain XHV734_3274 PF00072 Response regulator receiver domain XHV734_3274 PF01339 CheB methylesterase XHV734_3275 PF13091 PLD-like domain XHV734_3277 PF05649 Peptidase family M13 XHV734_3277 PF01431 Peptidase family M13 XHV734_3279 PF00300 Histidine phosphatase superfamily (branch 1) XHV734_3280 PF04493 Endonuclease V XHV734_3281 PF02678 Pirin XHV734_3281 PF05726 Pirin C-terminal cupin domain XHV734_3285 PF05726 Pirin C-terminal cupin domain XHV734_3285 PF02678 Pirin XHV734_3286 PF13722 5TM C-terminal transporter carbon starvation CstA XHV734_3286 PF02554 Carbon starvation protein CstA XHV734_3287 PF04328 Selenoprotein, putative XHV734_3289 PF13426 PAS domain XHV734_3289 PF00072 Response regulator receiver domain XHV734_3289 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_3290 PF06745 KaiC XHV734_3291 PF00072 Response regulator receiver domain XHV734_3291 PF00158 Sigma-54 interaction domain XHV734_3291 PF02954 Bacterial regulatory protein, Fis family XHV734_3292 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_3292 PF08448 PAS fold XHV734_3292 PF00072 Response regulator receiver domain XHV734_3292 PF00512 His Kinase A (phospho-acceptor) domain XHV734_3292 PF13188 PAS domain XHV734_3294 PF01494 FAD binding domain XHV734_3295 PF00672 HAMP domain XHV734_3295 PF02203 Tar ligand binding domain homologue XHV734_3295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XHV734_3320 PF01555 DNA methylase XHV734_3326 PF04002 RadC-like JAB domain XHV734_3341 PF00092 von Willebrand factor type A domain XHV734_3345 PF05593 RHS Repeat XHV734_3345 PF03527 RHS protein XHV734_3353 PF12462 DNA helicase IV / RNA helicase N terminal XHV734_3353 PF00580 UvrD/REP helicase N-terminal domain XHV734_3353 PF13361 UvrD-like helicase C-terminal domain XHV734_3354 PF01734 Patatin-like phospholipase XHV734_3361 PF03466 LysR substrate binding domain XHV734_3361 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_3362 PF02403 Seryl-tRNA synthetase N-terminal domain XHV734_3362 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XHV734_3363 PF03544 Gram-negative bacterial TonB protein C-terminal XHV734_3365 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XHV734_3366 PF01817 Chorismate mutase type II XHV734_3366 PF01842 ACT domain XHV734_3366 PF00800 Prephenate dehydratase XHV734_3367 PF00266 Aminotransferase class-V XHV734_3368 PF00174 Oxidoreductase molybdopterin binding domain XHV734_3370 PF01794 Ferric reductase like transmembrane component XHV734_3377 PF07969 Amidohydrolase family XHV734_3378 PF00221 Aromatic amino acid lyase XHV734_3381 PF01175 Urocanase Rossmann-like domain XHV734_3381 PF17392 Urocanase C-terminal domain XHV734_3381 PF17391 Urocanase N-terminal domain XHV734_3384 PF07690 Major Facilitator Superfamily XHV734_3385 PF01627 Hpt domain XHV734_3385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_3385 PF00512 His Kinase A (phospho-acceptor) domain XHV734_3385 PF00672 HAMP domain XHV734_3385 PF17149 Periplasmic sensor domain found in signal transduction proteins XHV734_3385 PF00072 Response regulator receiver domain XHV734_3386 PF17149 Periplasmic sensor domain found in signal transduction proteins XHV734_3386 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_3386 PF00512 His Kinase A (phospho-acceptor) domain XHV734_3386 PF01627 Hpt domain XHV734_3386 PF00672 HAMP domain XHV734_3386 PF00072 Response regulator receiver domain XHV734_3387 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_3387 PF01627 Hpt domain XHV734_3387 PF00512 His Kinase A (phospho-acceptor) domain XHV734_3387 PF00072 Response regulator receiver domain XHV734_3388 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_3388 PF00512 His Kinase A (phospho-acceptor) domain XHV734_3388 PF00072 Response regulator receiver domain XHV734_3388 PF01627 Hpt domain XHV734_3389 PF04264 YceI-like domain XHV734_3390 PF01292 Prokaryotic cytochrome b561 XHV734_3392 PF00313 'Cold-shock' DNA-binding domain XHV734_3394 PF03315 Serine dehydratase beta chain XHV734_3394 PF03313 Serine dehydratase alpha chain XHV734_3395 PF12697 Alpha/beta hydrolase family XHV734_3396 PF00742 Homoserine dehydrogenase XHV734_3396 PF03447 Homoserine dehydrogenase, NAD binding domain XHV734_3396 PF00696 Amino acid kinase family XHV734_3397 PF01053 Cys/Met metabolism PLP-dependent enzyme XHV734_3398 PF00561 alpha/beta hydrolase fold XHV734_3399 PF01551 Peptidase family M23 XHV734_3399 PF08460 Bacterial SH3 domain XHV734_3400 PF16658 Class II release factor RF3, C-terminal domain XHV734_3400 PF00009 Elongation factor Tu GTP binding domain XHV734_3401 PF03006 Haemolysin-III related XHV734_3402 PF05170 AsmA family XHV734_3404 PF00571 CBS domain XHV734_3404 PF00478 IMP dehydrogenase / GMP reductase domain XHV734_3405 PF00535 Glycosyl transferase family 2 XHV734_3406 PF00912 Transglycosylase XHV734_3407 PF01430 Hsp33 protein XHV734_3410 PF00593 TonB dependent receptor XHV734_3410 PF07715 TonB-dependent Receptor Plug Domain XHV734_3411 PF00440 Bacterial regulatory proteins, tetR family XHV734_3412 PF00561 alpha/beta hydrolase fold XHV734_3413 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XHV734_3413 PF09317 Domain of unknown function (DUF1974) XHV734_3413 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XHV734_3420 PF01597 Glycine cleavage H-protein XHV734_3421 PF08669 Glycine cleavage T-protein C-terminal barrel domain XHV734_3421 PF01571 Aminomethyltransferase folate-binding domain XHV734_3422 PF02694 Uncharacterised BCR, YnfA/UPF0060 family XHV734_3423 PF03819 MazG nucleotide pyrophosphohydrolase domain XHV734_3424 PF00459 Inositol monophosphatase family XHV734_3425 PF00293 NUDIX domain XHV734_3426 PF00202 Aminotransferase class-III XHV734_3427 PF04452 RNA methyltransferase XHV734_3428 PF02685 Glucokinase XHV734_3431 PF01476 LysM domain XHV734_3431 PF00704 Glycosyl hydrolases family 18 XHV734_3433 PF07691 PA14 domain XHV734_3433 PF02838 Glycosyl hydrolase family 20, domain 2 XHV734_3433 PF00728 Glycosyl hydrolase family 20, catalytic domain XHV734_3436 PF14310 Fibronectin type III-like domain XHV734_3436 PF00933 Glycosyl hydrolase family 3 N terminal domain XHV734_3436 PF01915 Glycosyl hydrolase family 3 C-terminal domain XHV734_3436 PF07691 PA14 domain XHV734_3438 PF01301 Glycosyl hydrolases family 35 XHV734_3439 PF13520 Amino acid permease XHV734_3441 PF11975 Family 4 glycosyl hydrolase C-terminal domain XHV734_3441 PF02056 Family 4 glycosyl hydrolase XHV734_3443 PF17678 Glycosyl hydrolase family 92 N-terminal domain XHV734_3443 PF07971 Glycosyl hydrolase family 92 XHV734_3444 PF01301 Glycosyl hydrolases family 35 XHV734_3446 PF01527 Transposase XHV734_3447 PF13276 HTH-like domain XHV734_3447 PF13683 Integrase core domain XHV734_3462 PF03932 CutC family XHV734_3463 PF01112 Asparaginase XHV734_3464 PF12034 Domain of unknown function (DUF3520) XHV734_3464 PF00092 von Willebrand factor type A domain XHV734_3464 PF12450 von Willebrand factor XHV734_3465 PF04542 Sigma-70 region 2 XHV734_3465 PF08281 Sigma-70, region 4 XHV734_3468 PF13302 Acetyltransferase (GNAT) domain XHV734_3470 PF00072 Response regulator receiver domain XHV734_3470 PF01339 CheB methylesterase XHV734_3471 PF00072 Response regulator receiver domain XHV734_3471 PF01627 Hpt domain XHV734_3471 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_3471 PF02895 Signal transducing histidine kinase, homodimeric domain XHV734_3471 PF01584 CheW-like domain XHV734_3472 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term XHV734_3472 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XHV734_3473 PF01584 CheW-like domain XHV734_3474 PF00072 Response regulator receiver domain XHV734_3475 PF00072 Response regulator receiver domain XHV734_3476 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain XHV734_3476 PF02951 Prokaryotic glutathione synthetase, N-terminal domain XHV734_3478 PF00814 Glycoprotease family XHV734_3479 PF13307 Helicase C-terminal domain XHV734_3479 PF04851 Type III restriction enzyme, res subunit XHV734_3481 PF14814 Bifunctional transglycosylase second domain XHV734_3481 PF00905 Penicillin binding protein transpeptidase domain XHV734_3481 PF00912 Transglycosylase XHV734_3484 PF04607 Region found in RelA / SpoT proteins XHV734_3484 PF02824 TGS domain XHV734_3484 PF13291 ACT domain XHV734_3485 PF12706 Beta-lactamase superfamily domain XHV734_3486 PF03070 TENA/THI-4/PQQC family XHV734_3487 PF05402 Coenzyme PQQ synthesis protein D (PqqD) XHV734_3488 PF13186 Iron-sulfur cluster-binding domain XHV734_3488 PF04055 Radical SAM superfamily XHV734_3490 PF02685 Glucokinase XHV734_3492 PF00270 DEAD/DEAH box helicase XHV734_3492 PF11898 Domain of unknown function (DUF3418) XHV734_3492 PF04408 Helicase associated domain (HA2) XHV734_3492 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold XHV734_3492 PF00271 Helicase conserved C-terminal domain XHV734_3493 PF00210 Ferritin-like domain XHV734_3494 PF16124 RecQ zinc-binding XHV734_3494 PF09382 RQC domain XHV734_3494 PF00570 HRDC domain XHV734_3494 PF00271 Helicase conserved C-terminal domain XHV734_3494 PF00270 DEAD/DEAH box helicase XHV734_3501 PF00672 HAMP domain XHV734_3501 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XHV734_3501 PF02203 Tar ligand binding domain homologue XHV734_3507 PF06964 Alpha-L-arabinofuranosidase C-terminal domain XHV734_3508 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_3508 PF03466 LysR substrate binding domain XHV734_3512 PF00072 Response regulator receiver domain XHV734_3513 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_3513 PF13426 PAS domain XHV734_3513 PF00072 Response regulator receiver domain XHV734_3514 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_3514 PF00512 His Kinase A (phospho-acceptor) domain XHV734_3514 PF01627 Hpt domain XHV734_3514 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) XHV734_3514 PF00672 HAMP domain XHV734_3514 PF00072 Response regulator receiver domain XHV734_3515 PF03705 CheR methyltransferase, all-alpha domain XHV734_3515 PF01739 CheR methyltransferase, SAM binding domain XHV734_3516 PF00072 Response regulator receiver domain XHV734_3516 PF01339 CheB methylesterase XHV734_3517 PF13492 GAF domain XHV734_3517 PF13493 Domain of unknown function (DUF4118) XHV734_3517 PF00512 His Kinase A (phospho-acceptor) domain XHV734_3517 PF02702 Osmosensitive K+ channel His kinase sensor domain XHV734_3517 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_3518 PF07237 Protein of unknown function (DUF1428) XHV734_3519 PF00085 Thioredoxin XHV734_3520 PF07715 TonB-dependent Receptor Plug Domain XHV734_3520 PF00593 TonB dependent receptor XHV734_3524 PF00072 Response regulator receiver domain XHV734_3524 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_3524 PF17149 Periplasmic sensor domain found in signal transduction proteins XHV734_3524 PF00672 HAMP domain XHV734_3524 PF00512 His Kinase A (phospho-acceptor) domain XHV734_3524 PF01627 Hpt domain XHV734_3526 PF13581 Histidine kinase-like ATPase domain XHV734_3527 PF01740 STAS domain XHV734_3528 PF08678 Rsbr N terminal XHV734_3528 PF01740 STAS domain XHV734_3530 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XHV734_3533 PF00183 Hsp90 protein XHV734_3533 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_3534 PF12833 Helix-turn-helix domain XHV734_3538 PF05656 Protein of unknown function (DUF805) XHV734_3539 PF18073 Rubredoxin metal binding domain XHV734_3542 PF03626 Prokaryotic Cytochrome C oxidase subunit IV XHV734_3543 PF00510 Cytochrome c oxidase subunit III XHV734_3544 PF00115 Cytochrome C and Quinol oxidase polypeptide I XHV734_3545 PF06481 COX Aromatic Rich Motif XHV734_3545 PF00116 Cytochrome C oxidase subunit II, periplasmic domain XHV734_3546 PF02401 LytB protein XHV734_3547 PF01252 Signal peptidase (SPase) II XHV734_3548 PF08264 Anticodon-binding domain of tRNA XHV734_3548 PF00133 tRNA synthetases class I (I, L, M and V) XHV734_3548 PF06827 Zinc finger found in FPG and IleRS XHV734_3549 PF06574 FAD synthetase XHV734_3549 PF01687 Riboflavin kinase XHV734_3550 PF03023 Lipid II flippase MurJ XHV734_3551 PF01649 Ribosomal protein S20 XHV734_3552 PF01926 50S ribosome-binding GTPase XHV734_3552 PF01018 GTP1/OBG XHV734_3553 PF01016 Ribosomal L27 protein XHV734_3554 PF00829 Ribosomal prokaryotic L21 protein XHV734_3555 PF00005 ABC transporter XHV734_3555 PF17755 UvrA DNA-binding domain XHV734_3555 PF17760 UvrA interaction domain XHV734_3558 PF00378 Enoyl-CoA hydratase/isomerase XHV734_3561 PF04542 Sigma-70 region 2 XHV734_3561 PF08281 Sigma-70, region 4 XHV734_3564 PF04377 Arginine-tRNA-protein transferase, C terminus XHV734_3564 PF04376 Arginine-tRNA-protein transferase, N terminus XHV734_3569 PF01370 NAD dependent epimerase/dehydratase family XHV734_3569 PF02222 ATP-grasp domain XHV734_3576 PF00730 HhH-GPD superfamily base excision DNA repair protein XHV734_3580 PF00072 Response regulator receiver domain XHV734_3580 PF00196 Bacterial regulatory proteins, luxR family XHV734_3581 PF07730 Histidine kinase XHV734_3583 PF03775 Septum formation inhibitor MinC, C-terminal domain XHV734_3583 PF05209 Septum formation inhibitor MinC, N-terminal domain XHV734_3584 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XHV734_3585 PF03776 Septum formation topological specificity factor MinE XHV734_3587 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_3587 PF00512 His Kinase A (phospho-acceptor) domain XHV734_3588 PF00072 Response regulator receiver domain XHV734_3588 PF00486 Transcriptional regulatory protein, C terminal XHV734_3591 PF00884 Sulfatase XHV734_3591 PF08019 Phosphoethanolamine transferase EptA/EptB XHV734_3595 PF07690 Major Facilitator Superfamily XHV734_3596 PF02347 Glycine cleavage system P-protein XHV734_3597 PF00135 Carboxylesterase family XHV734_3598 PF00248 Aldo/keto reductase family XHV734_3600 PF06628 Catalase-related immune-responsive XHV734_3600 PF18011 C-terminal domain found in long catalases XHV734_3600 PF00199 Catalase XHV734_3601 PF12833 Helix-turn-helix domain XHV734_3601 PF02311 AraC-like ligand binding domain XHV734_3604 PF00326 Prolyl oligopeptidase family XHV734_3604 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region XHV734_3604 PF07676 WD40-like Beta Propeller Repeat XHV734_3607 PF03169 OPT oligopeptide transporter protein XHV734_3610 PF07733 Bacterial DNA polymerase III alpha NTPase domain XHV734_3610 PF17657 Bacterial DNA polymerase III alpha subunit finger domain XHV734_3610 PF02811 PHP domain XHV734_3610 PF14579 Helix-hairpin-helix motif XHV734_3613 PF01726 LexA DNA binding domain XHV734_3613 PF00717 Peptidase S24-like XHV734_3622 PF04542 Sigma-70 region 2 XHV734_3622 PF08281 Sigma-70, region 4 XHV734_3623 PF00111 2Fe-2S iron-sulfur cluster binding domain XHV734_3623 PF01799 [2Fe-2S] binding domain XHV734_3624 PF03450 CO dehydrogenase flavoprotein C-terminal domain XHV734_3624 PF00941 FAD binding domain in molybdopterin dehydrogenase XHV734_3625 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XHV734_3625 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase XHV734_3626 PF14310 Fibronectin type III-like domain XHV734_3626 PF00933 Glycosyl hydrolase family 3 N terminal domain XHV734_3626 PF01915 Glycosyl hydrolase family 3 C-terminal domain XHV734_3629 PF17755 UvrA DNA-binding domain XHV734_3634 PF07992 Pyridine nucleotide-disulphide oxidoreductase XHV734_3636 PF17678 Glycosyl hydrolase family 92 N-terminal domain XHV734_3636 PF07971 Glycosyl hydrolase family 92 XHV734_3640 PF01256 Carbohydrate kinase XHV734_3641 PF00300 Histidine phosphatase superfamily (branch 1) XHV734_3641 PF13456 Reverse transcriptase-like XHV734_3656 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) XHV734_3656 PF12008 Type I restriction and modification enzyme - subunit R C terminal XHV734_3656 PF18766 SWI2/SNF2 ATPase XHV734_3660 PF02384 N-6 DNA Methylase XHV734_3660 PF12161 HsdM N-terminal domain XHV734_3666 PF00709 Adenylosuccinate synthetase XHV734_3669 PF01145 SPFH domain / Band 7 family XHV734_3670 PF01145 SPFH domain / Band 7 family XHV734_3670 PF12221 Bacterial membrane protein N terminal XHV734_3671 PF00072 Response regulator receiver domain XHV734_3673 PF01556 DnaJ C terminal domain XHV734_3673 PF00226 DnaJ domain XHV734_3675 PF08534 Redoxin XHV734_3677 PF06832 Penicillin-Binding Protein C-terminus Family XHV734_3677 PF00912 Transglycosylase XHV734_3677 PF00905 Penicillin binding protein transpeptidase domain XHV734_3682 PF07703 Alpha-2-macroglobulin bait region domain XHV734_3682 PF00207 Alpha-2-macroglobulin family XHV734_3682 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain XHV734_3682 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain XHV734_3682 PF17962 Bacterial macroglobulin domain 6 XHV734_3682 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain XHV734_3682 PF11974 Bacterial alpha-2-macroglobulin MG3 domain XHV734_3682 PF01835 MG2 domain XHV734_3686 PF07715 TonB-dependent Receptor Plug Domain XHV734_3686 PF00593 TonB dependent receptor XHV734_3688 PF04303 PrpF protein XHV734_3689 PF00330 Aconitase family (aconitate hydratase) XHV734_3689 PF00694 Aconitase C-terminal domain XHV734_3690 PF00285 Citrate synthase, C-terminal domain XHV734_3692 PF06506 Propionate catabolism activator XHV734_3692 PF00158 Sigma-54 interaction domain XHV734_3692 PF02954 Bacterial regulatory protein, Fis family XHV734_3695 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system XHV734_3696 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system XHV734_3699 PF09115 DNA polymerase III, delta subunit, C terminal XHV734_3700 PF02618 YceG-like family XHV734_3701 PF00425 chorismate binding enzyme XHV734_3701 PF04715 Anthranilate synthase component I, N terminal region XHV734_3702 PF02801 Beta-ketoacyl synthase, C-terminal domain XHV734_3702 PF00109 Beta-ketoacyl synthase, N-terminal domain XHV734_3703 PF00550 Phosphopantetheine attachment site XHV734_3705 PF00698 Acyl transferase domain XHV734_3707 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XHV734_3707 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XHV734_3708 PF01783 Ribosomal L32p protein family XHV734_3709 PF02620 Large ribosomal RNA subunit accumulation protein YceD XHV734_3710 PF02545 Maf-like protein XHV734_3713 PF17863 AAA lid domain XHV734_3713 PF07726 ATPase family associated with various cellular activities (AAA) XHV734_3715 PF01841 Transglutaminase-like superfamily XHV734_3715 PF11992 Domain of unknown function (DUF3488) XHV734_3715 PF13559 Domain of unknown function (DUF4129) XHV734_3717 PF01230 HIT domain XHV734_3718 PF13662 Toprim domain XHV734_3718 PF02132 RecR protein XHV734_3719 PF02575 YbaB/EbfC DNA-binding family XHV734_3720 PF12169 DNA polymerase III subunits gamma and tau domain III XHV734_3720 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding XHV734_3720 PF12170 DNA polymerase III tau subunit V interacting with alpha XHV734_3723 PF01926 50S ribosome-binding GTPase XHV734_3735 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XHV734_3736 PF00005 ABC transporter XHV734_3745 PF12102 Domain of unknown function (DUF3578) XHV734_3745 PF07728 AAA domain (dynein-related subfamily) XHV734_3751 PF02391 MoaE protein XHV734_3752 PF02597 ThiS family XHV734_3753 PF01967 MoaC family XHV734_3754 PF06463 Molybdenum Cofactor Synthesis C XHV734_3754 PF04055 Radical SAM superfamily XHV734_3755 PF12706 Beta-lactamase superfamily domain XHV734_3755 PF00753 Metallo-beta-lactamase superfamily XHV734_3757 PF01075 Glycosyltransferase family 9 (heptosyltransferase) XHV734_3760 PF00929 Exonuclease XHV734_3761 PF00075 RNase H XHV734_3763 PF00753 Metallo-beta-lactamase superfamily XHV734_3763 PF16123 Hydroxyacylglutathione hydrolase C-terminus XHV734_3764 PF01476 LysM domain XHV734_3764 PF05257 CHAP domain XHV734_3768 PF00216 Bacterial DNA-binding protein XHV734_3770 PF02190 ATP-dependent protease La (LON) substrate-binding domain XHV734_3770 PF05362 Lon protease (S16) C-terminal proteolytic domain XHV734_3770 PF00004 ATPase family associated with various cellular activities (AAA) XHV734_3771 PF07724 AAA domain (Cdc48 subfamily) XHV734_3771 PF10431 C-terminal, D2-small domain, of ClpB protein XHV734_3771 PF06689 ClpX C4-type zinc finger XHV734_3772 PF00574 Clp protease XHV734_3773 PF05698 Bacterial trigger factor protein (TF) C-terminus XHV734_3773 PF05697 Bacterial trigger factor protein (TF) XHV734_3775 PF00072 Response regulator receiver domain XHV734_3775 PF13188 PAS domain XHV734_3775 PF08448 PAS fold XHV734_3775 PF00512 His Kinase A (phospho-acceptor) domain XHV734_3775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_3782 PF01555 DNA methylase XHV734_3836 PF00180 Isocitrate/isopropylmalate dehydrogenase XHV734_3836 PF18324 Hypothetical protein TT1725 XHV734_3838 PF00462 Glutaredoxin XHV734_3839 PF01435 Peptidase family M48 XHV734_3839 PF13181 Tetratricopeptide repeat XHV734_3840 PF00486 Transcriptional regulatory protein, C terminal XHV734_3840 PF00072 Response regulator receiver domain XHV734_3841 PF11808 Phosphate regulon sensor protein PhoR XHV734_3841 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_3841 PF00512 His Kinase A (phospho-acceptor) domain XHV734_3841 PF00989 PAS fold XHV734_3842 PF17941 Polyphosphate kinase C-terminal domain 1 XHV734_3842 PF13090 Polyphosphate kinase C-terminal domain 2 XHV734_3842 PF02503 Polyphosphate kinase middle domain XHV734_3842 PF13089 Polyphosphate kinase N-terminal domain XHV734_3843 PF02541 Ppx/GppA phosphatase family XHV734_3844 PF13439 Glycosyltransferase Family 4 XHV734_3844 PF00534 Glycosyl transferases group 1 XHV734_3845 PF01569 PAP2 superfamily XHV734_3847 PF00149 Calcineurin-like phosphoesterase XHV734_3850 PF04305 Protein of unknown function (DUF455) XHV734_3851 PF00156 Phosphoribosyl transferase domain XHV734_3855 PF08245 Mur ligase middle domain XHV734_3855 PF02875 Mur ligase family, glutamate ligase domain XHV734_3858 PF00300 Histidine phosphatase superfamily (branch 1) XHV734_3859 PF10459 Peptidase S46 XHV734_3860 PF05506 Domain of unknown function (DUF756) XHV734_3860 PF04185 Phosphoesterase family XHV734_3864 PF00107 Zinc-binding dehydrogenase XHV734_3864 PF08240 Alcohol dehydrogenase GroES-like domain XHV734_3868 PF17850 CysA C-terminal regulatory domain XHV734_3868 PF00005 ABC transporter XHV734_3868 PF12857 TOBE-like domain XHV734_3869 PF00528 Binding-protein-dependent transport system inner membrane component XHV734_3870 PF00528 Binding-protein-dependent transport system inner membrane component XHV734_3872 PF00155 Aminotransferase class I and II XHV734_3874 PF00849 RNA pseudouridylate synthase XHV734_3876 PF00223 Photosystem I psaA/psaB protein XHV734_3876 PF00691 OmpA family XHV734_3877 PF08240 Alcohol dehydrogenase GroES-like domain XHV734_3877 PF00107 Zinc-binding dehydrogenase XHV734_3878 PF07992 Pyridine nucleotide-disulphide oxidoreductase XHV734_3878 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XHV734_3884 PF00043 Glutathione S-transferase, C-terminal domain XHV734_3884 PF02798 Glutathione S-transferase, N-terminal domain XHV734_3885 PF00056 lactate/malate dehydrogenase, NAD binding domain XHV734_3885 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain XHV734_3886 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD XHV734_3889 PF00679 Elongation factor G C-terminus XHV734_3889 PF00009 Elongation factor Tu GTP binding domain XHV734_3889 PF03144 Elongation factor Tu domain 2 XHV734_3891 PF01425 Amidase XHV734_3893 PF01474 Class-II DAHP synthetase family XHV734_3894 PF02600 Disulfide bond formation protein DsbB XHV734_3896 PF01196 Ribosomal protein L17 XHV734_3897 PF01000 RNA polymerase Rpb3/RpoA insert domain XHV734_3897 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain XHV734_3897 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain XHV734_3898 PF00163 Ribosomal protein S4/S9 N-terminal domain XHV734_3898 PF01479 S4 domain XHV734_3899 PF00411 Ribosomal protein S11 XHV734_3900 PF00416 Ribosomal protein S13/S18 XHV734_3901 PF00344 SecY translocase XHV734_3902 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A XHV734_3903 PF00327 Ribosomal protein L30p/L7e XHV734_3904 PF03719 Ribosomal protein S5, C-terminal domain XHV734_3904 PF00333 Ribosomal protein S5, N-terminal domain XHV734_3905 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast XHV734_3906 PF00347 Ribosomal protein L6 XHV734_3907 PF00410 Ribosomal protein S8 XHV734_3908 PF00253 Ribosomal protein S14p/S29e XHV734_3909 PF00281 Ribosomal protein L5 XHV734_3909 PF00673 ribosomal L5P family C-terminus XHV734_3910 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 XHV734_3910 PF00467 KOW motif XHV734_3911 PF00238 Ribosomal protein L14p/L23e XHV734_3912 PF00366 Ribosomal protein S17 XHV734_3913 PF00831 Ribosomal L29 protein XHV734_3914 PF00252 Ribosomal protein L16p/L10e XHV734_3915 PF07650 KH domain XHV734_3915 PF00189 Ribosomal protein S3, C-terminal domain XHV734_3916 PF00237 Ribosomal protein L22p/L17e XHV734_3917 PF00203 Ribosomal protein S19 XHV734_3918 PF03947 Ribosomal Proteins L2, C-terminal domain XHV734_3918 PF00181 Ribosomal Proteins L2, RNA binding domain XHV734_3919 PF00276 Ribosomal protein L23 XHV734_3920 PF00573 Ribosomal protein L4/L1 family XHV734_3921 PF00297 Ribosomal protein L3 XHV734_3922 PF00338 Ribosomal protein S10p/S20e XHV734_3923 PF03143 Elongation factor Tu C-terminal domain XHV734_3923 PF03144 Elongation factor Tu domain 2 XHV734_3923 PF00009 Elongation factor Tu GTP binding domain XHV734_3924 PF14492 Elongation Factor G, domain II XHV734_3924 PF00679 Elongation factor G C-terminus XHV734_3924 PF03764 Elongation factor G, domain IV XHV734_3924 PF00009 Elongation factor Tu GTP binding domain XHV734_3924 PF03144 Elongation factor Tu domain 2 XHV734_3925 PF00177 Ribosomal protein S7p/S5e XHV734_3926 PF00164 Ribosomal protein S12/S23 XHV734_3927 PF04998 RNA polymerase Rpb1, domain 5 XHV734_3927 PF04997 RNA polymerase Rpb1, domain 1 XHV734_3927 PF00623 RNA polymerase Rpb1, domain 2 XHV734_3927 PF05000 RNA polymerase Rpb1, domain 4 XHV734_3927 PF04983 RNA polymerase Rpb1, domain 3 XHV734_3928 PF10385 RNA polymerase beta subunit external 1 domain XHV734_3928 PF04565 RNA polymerase Rpb2, domain 3 XHV734_3928 PF00562 RNA polymerase Rpb2, domain 6 XHV734_3928 PF04560 RNA polymerase Rpb2, domain 7 XHV734_3928 PF04561 RNA polymerase Rpb2, domain 2 XHV734_3928 PF04563 RNA polymerase beta subunit XHV734_3930 PF16320 Ribosomal protein L7/L12 dimerisation domain XHV734_3930 PF00542 Ribosomal protein L7/L12 C-terminal domain XHV734_3931 PF00466 Ribosomal protein L10 XHV734_3932 PF00687 Ribosomal protein L1p/L10e family XHV734_3933 PF03946 Ribosomal protein L11, N-terminal domain XHV734_3933 PF00298 Ribosomal protein L11, RNA binding domain XHV734_3934 PF02357 Transcription termination factor nusG XHV734_3934 PF00467 KOW motif XHV734_3935 PF00584 SecE/Sec61-gamma subunits of protein translocation complex XHV734_3936 PF03143 Elongation factor Tu C-terminal domain XHV734_3936 PF00009 Elongation factor Tu GTP binding domain XHV734_3936 PF03144 Elongation factor Tu domain 2 XHV734_3937 PF06071 Protein of unknown function (DUF933) XHV734_3937 PF01926 50S ribosome-binding GTPase XHV734_3938 PF01195 Peptidyl-tRNA hydrolase XHV734_3939 PF14693 Ribosomal protein TL5, C-terminal domain XHV734_3939 PF01386 Ribosomal L25p family XHV734_3940 PF14572 Phosphoribosyl synthetase-associated domain XHV734_3940 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase XHV734_3941 PF08544 GHMP kinases C terminal XHV734_3941 PF00288 GHMP kinases N terminal domain XHV734_3942 PF03550 Outer membrane lipoprotein LolB XHV734_3944 PF01488 Shikimate / quinate 5-dehydrogenase XHV734_3944 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain XHV734_3944 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain XHV734_3945 PF00472 RF-1 domain XHV734_3945 PF03462 PCRF domain XHV734_3948 PF00994 Probable molybdopterin binding domain XHV734_3949 PF03976 Polyphosphate kinase 2 (PPK2) XHV734_3951 PF00708 Acylphosphatase XHV734_3952 PF08534 Redoxin XHV734_3953 PF03631 Virulence factor BrkB XHV734_3954 PF03358 NADPH-dependent FMN reductase XHV734_3957 PF04073 Aminoacyl-tRNA editing domain XHV734_3958 PF00082 Subtilase family XHV734_3958 PF04151 Bacterial pre-peptidase C-terminal domain XHV734_3959 PF04151 Bacterial pre-peptidase C-terminal domain XHV734_3959 PF00082 Subtilase family XHV734_3960 PF00082 Subtilase family XHV734_3960 PF04151 Bacterial pre-peptidase C-terminal domain XHV734_3961 PF01063 Amino-transferase class IV XHV734_3973 PF01367 5'-3' exonuclease, C-terminal SAM fold XHV734_3973 PF00476 DNA polymerase family A XHV734_3973 PF01612 3'-5' exonuclease XHV734_3973 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain XHV734_3974 PF00293 NUDIX domain XHV734_3976 PF00561 alpha/beta hydrolase fold XHV734_3977 PF05175 Methyltransferase small domain XHV734_3977 PF17827 PrmC N-terminal domain XHV734_3978 PF00578 AhpC/TSA family XHV734_3978 PF10417 C-terminal domain of 1-Cys peroxiredoxin XHV734_3979 PF13192 Thioredoxin domain XHV734_3979 PF07992 Pyridine nucleotide-disulphide oxidoreductase XHV734_3980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_3980 PF03466 LysR substrate binding domain XHV734_3981 PF14760 Rnk N-terminus XHV734_3981 PF01272 Transcription elongation factor, GreA/GreB, C-term XHV734_3982 PF00923 Transaldolase/Fructose-6-phosphate aldolase XHV734_3985 PF01625 Peptide methionine sulfoxide reductase XHV734_3987 PF00072 Response regulator receiver domain XHV734_3987 PF00196 Bacterial regulatory proteins, luxR family XHV734_3988 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) XHV734_3988 PF01627 Hpt domain XHV734_3988 PF00072 Response regulator receiver domain XHV734_3988 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_3988 PF00672 HAMP domain XHV734_3988 PF00512 His Kinase A (phospho-acceptor) domain XHV734_3989 PF00072 Response regulator receiver domain XHV734_3989 PF00990 Diguanylate cyclase, GGDEF domain XHV734_3992 PF00749 tRNA synthetases class I (E and Q), catalytic domain XHV734_3992 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain XHV734_3993 PF00892 EamA-like transporter family XHV734_3998 PF18125 RlmM ferredoxin-like domain XHV734_3998 PF01728 FtsJ-like methyltransferase XHV734_3999 PF02894 Oxidoreductase family, C-terminal alpha/beta domain XHV734_3999 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XHV734_4008 PF00378 Enoyl-CoA hydratase/isomerase XHV734_4009 PF00171 Aldehyde dehydrogenase family XHV734_4010 PF00501 AMP-binding enzyme XHV734_4010 PF13193 AMP-binding enzyme C-terminal domain XHV734_4011 PF03466 LysR substrate binding domain XHV734_4011 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_4012 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase XHV734_4012 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit XHV734_4013 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase XHV734_4014 PF00392 Bacterial regulatory proteins, gntR family XHV734_4014 PF07729 FCD domain XHV734_4018 PF01494 FAD binding domain XHV734_4019 PF01494 FAD binding domain XHV734_4021 PF01923 Cobalamin adenosyltransferase XHV734_4022 PF00850 Histone deacetylase domain XHV734_4024 PF04453 LPS transport system D XHV734_4024 PF03968 OstA-like protein XHV734_4025 PF09312 SurA N-terminal domain XHV734_4025 PF00639 PPIC-type PPIASE domain XHV734_4026 PF04166 Pyridoxal phosphate biosynthetic protein PdxA XHV734_4027 PF00398 Ribosomal RNA adenine dimethylase XHV734_4028 PF04379 ApaG domain XHV734_4029 PF00149 Calcineurin-like phosphoesterase XHV734_4030 PF03358 NADPH-dependent FMN reductase XHV734_4031 PF00296 Luciferase-like monooxygenase XHV734_4033 PF00528 Binding-protein-dependent transport system inner membrane component XHV734_4034 PF00005 ABC transporter XHV734_4035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XHV734_4035 PF08028 Acyl-CoA dehydrogenase, C-terminal domain XHV734_4036 PF00186 Dihydrofolate reductase XHV734_4037 PF00303 Thymidylate synthase XHV734_4038 PF01790 Prolipoprotein diacylglyceryl transferase XHV734_4043 PF01219 Prokaryotic diacylglycerol kinase XHV734_4045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_4045 PF08521 Two-component sensor kinase N-terminal XHV734_4045 PF00512 His Kinase A (phospho-acceptor) domain XHV734_4046 PF00486 Transcriptional regulatory protein, C terminal XHV734_4046 PF00072 Response regulator receiver domain XHV734_4047 PF13472 GDSL-like Lipase/Acylhydrolase family XHV734_4048 PF00005 ABC transporter XHV734_4050 PF02668 Taurine catabolism dioxygenase TauD, TfdA family XHV734_4052 PF00005 ABC transporter XHV734_4053 PF00528 Binding-protein-dependent transport system inner membrane component XHV734_4056 PF01527 Transposase XHV734_4057 PF13683 Integrase core domain XHV734_4057 PF13276 HTH-like domain XHV734_4068 PF07715 TonB-dependent Receptor Plug Domain XHV734_4068 PF00593 TonB dependent receptor XHV734_4071 PF00248 Aldo/keto reductase family XHV734_4072 PF01773 Na+ dependent nucleoside transporter N-terminus XHV734_4072 PF07662 Na+ dependent nucleoside transporter C-terminus XHV734_4072 PF07670 Nucleoside recognition XHV734_4073 PF00294 pfkB family carbohydrate kinase XHV734_4073 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) XHV734_4077 PF01207 Dihydrouridine synthase (Dus) XHV734_4078 PF13649 Methyltransferase domain XHV734_4080 PF02773 S-adenosylmethionine synthetase, C-terminal domain XHV734_4080 PF02772 S-adenosylmethionine synthetase, central domain XHV734_4080 PF00438 S-adenosylmethionine synthetase, N-terminal domain XHV734_4082 PF00328 Histidine phosphatase superfamily (branch 2) XHV734_4084 PF00223 Photosystem I psaA/psaB protein XHV734_4084 PF00691 OmpA family XHV734_4088 PF00311 Phosphoenolpyruvate carboxylase XHV734_4092 PF05221 S-adenosyl-L-homocysteine hydrolase XHV734_4092 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain XHV734_4098 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XHV734_4100 PF00107 Zinc-binding dehydrogenase XHV734_4100 PF14765 Polyketide synthase dehydratase XHV734_4100 PF00550 Phosphopantetheine attachment site XHV734_4100 PF08659 KR domain XHV734_4100 PF02801 Beta-ketoacyl synthase, C-terminal domain XHV734_4100 PF00109 Beta-ketoacyl synthase, N-terminal domain XHV734_4100 PF16197 Ketoacyl-synthetase C-terminal extension XHV734_4100 PF08240 Alcohol dehydrogenase GroES-like domain XHV734_4100 PF00698 Acyl transferase domain XHV734_4102 PF02219 Methylenetetrahydrofolate reductase XHV734_4107 PF00293 NUDIX domain XHV734_4109 PF02810 SEC-C motif XHV734_4109 PF07517 SecA DEAD-like domain XHV734_4109 PF01043 SecA preprotein cross-linking domain XHV734_4109 PF07516 SecA Wing and Scaffold domain XHV734_4110 PF01476 LysM domain XHV734_4110 PF08525 Opacity-associated protein A N-terminal motif XHV734_4110 PF01551 Peptidase family M23 XHV734_4112 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase XHV734_4113 PF12327 FtsZ family, C-terminal domain XHV734_4113 PF00091 Tubulin/FtsZ family, GTPase domain XHV734_4114 PF02491 SHS2 domain inserted in FTSA XHV734_4115 PF03799 Cell division protein FtsQ XHV734_4115 PF08478 POTRA domain, FtsQ-type XHV734_4116 PF07478 D-ala D-ala ligase C-terminus XHV734_4116 PF01820 D-ala D-ala ligase N-terminus XHV734_4117 PF02875 Mur ligase family, glutamate ligase domain XHV734_4117 PF01225 Mur ligase family, catalytic domain XHV734_4117 PF08245 Mur ligase middle domain XHV734_4118 PF03033 Glycosyltransferase family 28 N-terminal domain XHV734_4118 PF04101 Glycosyltransferase family 28 C-terminal domain XHV734_4119 PF01098 Cell cycle protein XHV734_4120 PF00953 Glycosyl transferase family 4 XHV734_4121 PF08245 Mur ligase middle domain XHV734_4121 PF01225 Mur ligase family, catalytic domain XHV734_4121 PF02875 Mur ligase family, glutamate ligase domain XHV734_4122 PF02875 Mur ligase family, glutamate ligase domain XHV734_4122 PF08245 Mur ligase middle domain XHV734_4122 PF01225 Mur ligase family, catalytic domain XHV734_4123 PF03717 Penicillin-binding Protein dimerisation domain XHV734_4123 PF00905 Penicillin binding protein transpeptidase domain XHV734_4124 PF04999 Cell division protein FtsL XHV734_4125 PF01795 MraW methylase family XHV734_4126 PF02381 MraZ protein, putative antitoxin-like XHV734_4131 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XHV734_4133 PF02021 Uncharacterised protein family UPF0102 XHV734_4134 PF04307 LexA-binding, inner membrane-associated putative hydrolase XHV734_4135 PF01565 FAD binding domain XHV734_4135 PF02913 FAD linked oxidases, C-terminal domain XHV734_4136 PF00486 Transcriptional regulatory protein, C terminal XHV734_4136 PF00072 Response regulator receiver domain XHV734_4137 PF13492 GAF domain XHV734_4137 PF02702 Osmosensitive K+ channel His kinase sensor domain XHV734_4137 PF00512 His Kinase A (phospho-acceptor) domain XHV734_4137 PF13493 Domain of unknown function (DUF4118) XHV734_4137 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_4138 PF02669 K+-transporting ATPase, c chain XHV734_4140 PF03814 Potassium-transporting ATPase A subunit XHV734_4144 PF00586 AIR synthase related protein, N-terminal domain XHV734_4144 PF02769 AIR synthase related protein, C-terminal domain XHV734_4145 PF01029 NusB family XHV734_4146 PF00885 6,7-dimethyl-8-ribityllumazine synthase XHV734_4148 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase XHV734_4148 PF00925 GTP cyclohydrolase II XHV734_4149 PF00677 Lumazine binding domain XHV734_4152 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XHV734_4152 PF01872 RibD C-terminal domain XHV734_4154 PF03477 ATP cone domain XHV734_4155 PF00464 Serine hydroxymethyltransferase XHV734_4157 PF12848 ABC transporter XHV734_4157 PF00005 ABC transporter XHV734_4158 PF01327 Polypeptide deformylase XHV734_4161 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family XHV734_4161 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain XHV734_4168 PF00593 TonB dependent receptor XHV734_4168 PF07715 TonB-dependent Receptor Plug Domain XHV734_4170 PF00392 Bacterial regulatory proteins, gntR family XHV734_4170 PF07702 UTRA domain XHV734_4176 PF01527 Transposase XHV734_4177 PF13276 HTH-like domain XHV734_4177 PF13683 Integrase core domain XHV734_4178 PF07702 UTRA domain XHV734_4178 PF00392 Bacterial regulatory proteins, gntR family XHV734_4180 PF00263 Bacterial type II and III secretion system protein XHV734_4180 PF03958 Bacterial type II/III secretion system short domain XHV734_4182 PF10741 Type II secretion system (T2SS), protein M subtype b XHV734_4183 PF05137 Fimbrial assembly protein (PilN) XHV734_4184 PF03934 Type II secretion system (T2SS), protein K XHV734_4186 PF07963 Prokaryotic N-terminal methylation motif XHV734_4187 PF12019 Type II transport protein GspH XHV734_4188 PF08334 Type II secretion system (T2SS), protein G XHV734_4189 PF00482 Type II secretion system (T2SS), protein F XHV734_4190 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XHV734_4190 PF00437 Type II/IV secretion system protein XHV734_4191 PF00082 Subtilase family XHV734_4191 PF04151 Bacterial pre-peptidase C-terminal domain XHV734_4192 PF13018 Extended Signal Peptide of Type V secretion system XHV734_4192 PF03895 YadA-like membrane anchor domain XHV734_4192 PF05658 Head domain of trimeric autotransporter adhesin XHV734_4192 PF05662 Coiled stalk of trimeric autotransporter adhesin XHV734_4194 PF04151 Bacterial pre-peptidase C-terminal domain XHV734_4194 PF00082 Subtilase family XHV734_4195 PF13018 Extended Signal Peptide of Type V secretion system XHV734_4195 PF05662 Coiled stalk of trimeric autotransporter adhesin XHV734_4195 PF05658 Head domain of trimeric autotransporter adhesin XHV734_4195 PF03895 YadA-like membrane anchor domain XHV734_4196 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal XHV734_4196 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain XHV734_4196 PF02769 AIR synthase related protein, C-terminal domain XHV734_4197 PF10411 Disulfide bond isomerase protein N-terminus XHV734_4197 PF13098 Thioredoxin-like domain XHV734_4198 PF02899 Phage integrase, N-terminal SAM-like domain XHV734_4198 PF00589 Phage integrase family XHV734_4201 PF03739 Lipopolysaccharide export system permease LptF/LptG XHV734_4203 PF00883 Cytosol aminopeptidase family, catalytic domain XHV734_4203 PF02789 Cytosol aminopeptidase family, N-terminal domain XHV734_4205 PF08264 Anticodon-binding domain of tRNA XHV734_4205 PF00133 tRNA synthetases class I (I, L, M and V) XHV734_4205 PF10458 Valyl tRNA synthetase tRNA binding arm XHV734_4208 PF00544 Pectate lyase XHV734_4211 PF01066 CDP-alcohol phosphatidyltransferase XHV734_4213 PF03129 Anticodon binding domain XHV734_4213 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XHV734_4213 PF04073 Aminoacyl-tRNA editing domain XHV734_4216 PF02405 Permease MlaE XHV734_4217 PF00005 ABC transporter XHV734_4218 PF03886 ABC-type transport auxiliary lipoprotein component XHV734_4218 PF02470 MlaD protein XHV734_4222 PF14307 Glycosyltransferase WbsX XHV734_4222 PF05045 Rhamnan synthesis protein F XHV734_4226 PF01144 Coenzyme A transferase XHV734_4227 PF01144 Coenzyme A transferase XHV734_4228 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XHV734_4228 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XHV734_4228 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XHV734_4228 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XHV734_4229 PF01050 Mannose-6-phosphate isomerase XHV734_4229 PF00483 Nucleotidyl transferase XHV734_4230 PF04321 RmlD substrate binding domain XHV734_4231 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase XHV734_4232 PF00483 Nucleotidyl transferase XHV734_4233 PF16363 GDP-mannose 4,6 dehydratase XHV734_4234 PF01012 Electron transfer flavoprotein domain XHV734_4235 PF00766 Electron transfer flavoprotein FAD-binding domain XHV734_4235 PF01012 Electron transfer flavoprotein domain XHV734_4236 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XHV734_4237 PF00535 Glycosyl transferase family 2 XHV734_4241 PF16363 GDP-mannose 4,6 dehydratase XHV734_4242 PF16363 GDP-mannose 4,6 dehydratase XHV734_4245 PF13439 Glycosyltransferase Family 4 XHV734_4245 PF00534 Glycosyl transferases group 1 XHV734_4246 PF00069 Protein kinase domain XHV734_4246 PF13847 Methyltransferase domain XHV734_4247 PF00005 ABC transporter XHV734_4250 PF01053 Cys/Met metabolism PLP-dependent enzyme XHV734_4251 PF00571 CBS domain XHV734_4251 PF00291 Pyridoxal-phosphate dependent enzyme XHV734_4256 PF00437 Type II/IV secretion system protein XHV734_4257 PF14497 Glutathione S-transferase, C-terminal domain XHV734_4257 PF02798 Glutathione S-transferase, N-terminal domain XHV734_4260 PF00271 Helicase conserved C-terminal domain XHV734_4260 PF00270 DEAD/DEAH box helicase XHV734_4262 PF00593 TonB dependent receptor XHV734_4262 PF07715 TonB-dependent Receptor Plug Domain XHV734_4263 PF01242 6-pyruvoyl tetrahydropterin synthase XHV734_4266 PF13185 GAF domain XHV734_4268 PF00756 Putative esterase XHV734_4269 PF07715 TonB-dependent Receptor Plug Domain XHV734_4269 PF00593 TonB dependent receptor XHV734_4270 PF13419 Haloacid dehalogenase-like hydrolase XHV734_4271 PF11799 impB/mucB/samB family C-terminal domain XHV734_4271 PF00817 impB/mucB/samB family XHV734_4272 PF07977 FabA-like domain XHV734_4273 PF02801 Beta-ketoacyl synthase, C-terminal domain XHV734_4273 PF00109 Beta-ketoacyl synthase, N-terminal domain XHV734_4275 PF01432 Peptidase family M3 XHV734_4278 PF00394 Multicopper oxidase XHV734_4278 PF07732 Multicopper oxidase XHV734_4278 PF07731 Multicopper oxidase XHV734_4279 PF05275 Copper resistance protein B precursor (CopB) XHV734_4280 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XHV734_4284 PF00027 Cyclic nucleotide-binding domain XHV734_4284 PF13545 Crp-like helix-turn-helix domain XHV734_4285 PF01380 SIS domain XHV734_4286 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XHV734_4287 PF00005 ABC transporter XHV734_4288 PF00005 ABC transporter XHV734_4288 PF02687 FtsX-like permease family XHV734_4288 PF12704 MacB-like periplasmic core domain XHV734_4289 PF02687 FtsX-like permease family XHV734_4289 PF12704 MacB-like periplasmic core domain XHV734_4290 PF02954 Bacterial regulatory protein, Fis family XHV734_4290 PF00072 Response regulator receiver domain XHV734_4290 PF00158 Sigma-54 interaction domain XHV734_4291 PF00512 His Kinase A (phospho-acceptor) domain XHV734_4291 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_4296 PF12804 MobA-like NTP transferase domain XHV734_4296 PF14602 Hexapeptide repeat of succinyl-transferase XHV734_4296 PF00132 Bacterial transferase hexapeptide (six repeats) XHV734_4298 PF01817 Chorismate mutase type II XHV734_4299 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain XHV734_4299 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain XHV734_4300 PF02874 ATP synthase alpha/beta family, beta-barrel domain XHV734_4300 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XHV734_4301 PF00231 ATP synthase XHV734_4302 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XHV734_4302 PF02874 ATP synthase alpha/beta family, beta-barrel domain XHV734_4302 PF00306 ATP synthase alpha/beta chain, C terminal domain XHV734_4303 PF00213 ATP synthase delta (OSCP) subunit XHV734_4304 PF00430 ATP synthase B/B' CF(0) XHV734_4306 PF00137 ATP synthase subunit C XHV734_4307 PF00119 ATP synthase A chain XHV734_4311 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XHV734_4311 PF07992 Pyridine nucleotide-disulphide oxidoreductase XHV734_4313 PF00364 Biotin-requiring enzyme XHV734_4313 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XHV734_4313 PF02817 e3 binding domain XHV734_4318 PF03180 NLPA lipoprotein XHV734_4319 PF00528 Binding-protein-dependent transport system inner membrane component XHV734_4320 PF00005 ABC transporter XHV734_4320 PF09383 NIL domain XHV734_4321 PF00892 EamA-like transporter family XHV734_4323 PF04461 Protein of unknown function (DUF520) XHV734_4327 PF00849 RNA pseudouridylate synthase XHV734_4327 PF01479 S4 domain XHV734_4328 PF08468 Methyltransferase small domain N-terminal XHV734_4328 PF05175 Methyltransferase small domain XHV734_4330 PF07995 Glucose / Sorbosone dehydrogenase XHV734_4332 PF00072 Response regulator receiver domain XHV734_4332 PF00497 Bacterial extracellular solute-binding proteins, family 3 XHV734_4332 PF00512 His Kinase A (phospho-acceptor) domain XHV734_4332 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_4336 PF00842 Alanine racemase, C-terminal domain XHV734_4336 PF01168 Alanine racemase, N-terminal domain XHV734_4337 PF01266 FAD dependent oxidoreductase XHV734_4338 PF01037 Lrp/AsnC ligand binding domain XHV734_4341 PF01641 SelR domain XHV734_4343 PF01618 MotA/TolQ/ExbB proton channel family XHV734_4344 PF00691 OmpA family XHV734_4344 PF13677 Membrane MotB of proton-channel complex MotA/MotB XHV734_4357 PF00664 ABC transporter transmembrane region XHV734_4357 PF03412 Peptidase C39 family XHV734_4357 PF00005 ABC transporter XHV734_4360 PF13936 Helix-turn-helix domain XHV734_4360 PF00665 Integrase core domain XHV734_4365 PF01061 ABC-2 type transporter XHV734_4366 PF00005 ABC transporter XHV734_4367 PF00999 Sodium/hydrogen exchanger family XHV734_4370 PF02469 Fasciclin domain XHV734_4371 PF03167 Uracil DNA glycosylase superfamily XHV734_4375 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase XHV734_4377 PF03466 LysR substrate binding domain XHV734_4377 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_4378 PF03358 NADPH-dependent FMN reductase XHV734_4379 PF00248 Aldo/keto reductase family XHV734_4382 PF01431 Peptidase family M13 XHV734_4382 PF05649 Peptidase family M13 XHV734_4387 PF13520 Amino acid permease XHV734_4389 PF04397 LytTr DNA-binding domain XHV734_4389 PF00072 Response regulator receiver domain XHV734_4390 PF06580 Histidine kinase XHV734_4390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_4390 PF02743 Cache domain XHV734_4390 PF00672 HAMP domain XHV734_4393 PF05974 Domain of unknown function (DUF892) XHV734_4394 PF05067 Manganese containing catalase XHV734_4397 PF01739 CheR methyltransferase, SAM binding domain XHV734_4397 PF01339 CheB methylesterase XHV734_4397 PF08448 PAS fold XHV734_4397 PF03705 CheR methyltransferase, all-alpha domain XHV734_4400 PF02954 Bacterial regulatory protein, Fis family XHV734_4400 PF00072 Response regulator receiver domain XHV734_4400 PF00158 Sigma-54 interaction domain XHV734_4406 PF05598 Transposase domain (DUF772) XHV734_4406 PF01609 Transposase DDE domain XHV734_4407 PF16363 GDP-mannose 4,6 dehydratase XHV734_4409 PF03275 UDP-galactopyranose mutase XHV734_4411 PF00664 ABC transporter transmembrane region XHV734_4411 PF00005 ABC transporter XHV734_4415 PF13823 Alcohol dehydrogenase GroES-associated XHV734_4415 PF08240 Alcohol dehydrogenase GroES-like domain XHV734_4415 PF00107 Zinc-binding dehydrogenase XHV734_4420 PF03466 LysR substrate binding domain XHV734_4420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_4421 PF07690 Major Facilitator Superfamily XHV734_4426 PF07715 TonB-dependent Receptor Plug Domain XHV734_4426 PF00593 TonB dependent receptor XHV734_4429 PF00005 ABC transporter XHV734_4432 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_4432 PF03466 LysR substrate binding domain XHV734_4433 PF01042 Endoribonuclease L-PSP XHV734_4440 PF00916 Sulfate permease family XHV734_4440 PF01740 STAS domain XHV734_4444 PF12833 Helix-turn-helix domain XHV734_4444 PF01965 DJ-1/PfpI family XHV734_4446 PF07690 Major Facilitator Superfamily XHV734_4448 PF00440 Bacterial regulatory proteins, tetR family XHV734_4450 PF03466 LysR substrate binding domain XHV734_4450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_4451 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XHV734_4462 PF00145 C-5 cytosine-specific DNA methylase XHV734_4463 PF01381 Helix-turn-helix XHV734_4468 PF13276 HTH-like domain XHV734_4468 PF13683 Integrase core domain XHV734_4469 PF01527 Transposase XHV734_4471 PF01527 Transposase XHV734_4472 PF00665 Integrase core domain XHV734_4472 PF13333 Integrase core domain XHV734_4472 PF13276 HTH-like domain XHV734_4473 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) XHV734_4475 PF04610 TrbL/VirB6 plasmid conjugal transfer protein XHV734_4478 PF07996 Type IV secretion system proteins XHV734_4484 PF00589 Phage integrase family XHV734_4488 PF04546 Sigma-70, non-essential region XHV734_4488 PF04545 Sigma-70, region 4 XHV734_4488 PF03979 Sigma-70 factor, region 1.1 XHV734_4488 PF00140 Sigma-70 factor, region 1.2 XHV734_4488 PF04539 Sigma-70 region 3 XHV734_4488 PF04542 Sigma-70 region 2 XHV734_4489 PF02580 D-Tyr-tRNA(Tyr) deacylase XHV734_4490 PF03279 Bacterial lipid A biosynthesis acyltransferase XHV734_4492 PF00925 GTP cyclohydrolase II XHV734_4496 PF00535 Glycosyl transferase family 2 XHV734_4499 PF01029 NusB family XHV734_4499 PF01189 16S rRNA methyltransferase RsmB/F XHV734_4500 PF00551 Formyl transferase XHV734_4500 PF02911 Formyl transferase, C-terminal domain XHV734_4501 PF01327 Polypeptide deformylase XHV734_4502 PF01476 LysM domain XHV734_4503 PF02481 DNA recombination-mediator protein A XHV734_4503 PF17782 DprA winged helix domain XHV734_4504 PF04361 Protein of unknown function (DUF494) XHV734_4505 PF07963 Prokaryotic N-terminal methylation motif XHV734_4505 PF00114 Pilin (bacterial filament) XHV734_4507 PF01131 DNA topoisomerase XHV734_4507 PF01751 Toprim domain XHV734_4507 PF13368 Topoisomerase C-terminal repeat XHV734_4508 PF01300 Telomere recombination XHV734_4514 PF01343 Peptidase family S49 XHV734_4515 PF01554 MatE XHV734_4519 PF18074 Primosomal protein N C-terminal domain XHV734_4519 PF18319 PriA DNA helicase Cys-rich region (CRR) domain XHV734_4519 PF00271 Helicase conserved C-terminal domain XHV734_4519 PF00270 DEAD/DEAH box helicase XHV734_4519 PF17764 3′ DNA-binding domain (3′BD) XHV734_4523 PF13417 Glutathione S-transferase, N-terminal domain XHV734_4523 PF00043 Glutathione S-transferase, C-terminal domain XHV734_4526 PF07992 Pyridine nucleotide-disulphide oxidoreductase XHV734_4527 PF03458 UPF0126 domain XHV734_4528 PF04545 Sigma-70, region 4 XHV734_4528 PF04542 Sigma-70 region 2 XHV734_4529 PF03167 Uracil DNA glycosylase superfamily XHV734_4530 PF01339 CheB methylesterase XHV734_4530 PF00072 Response regulator receiver domain XHV734_4531 PF18075 FtsX extracellular domain XHV734_4532 PF00005 ABC transporter XHV734_4533 PF00270 DEAD/DEAH box helicase XHV734_4533 PF00271 Helicase conserved C-terminal domain XHV734_4533 PF12300 ATP-dependent RNA helicase RhlB XHV734_4534 PF00085 Thioredoxin XHV734_4535 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XHV734_4535 PF07497 Rho termination factor, RNA-binding domain XHV734_4535 PF07498 Rho termination factor, N-terminal domain XHV734_4538 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) XHV734_4540 PF00072 Response regulator receiver domain XHV734_4540 PF00196 Bacterial regulatory proteins, luxR family XHV734_4542 PF03971 Monomeric isocitrate dehydrogenase XHV734_4544 PF01476 LysM domain XHV734_4544 PF00756 Putative esterase XHV734_4545 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term XHV734_4545 PF14489 QueF-like protein XHV734_4546 PF07687 Peptidase dimerisation domain XHV734_4546 PF01546 Peptidase family M20/M25/M40 XHV734_4547 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XHV734_4548 PF00873 AcrB/AcrD/AcrF family XHV734_4549 PF00873 AcrB/AcrD/AcrF family XHV734_4550 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XHV734_4550 PF13378 Enolase C-terminal domain-like XHV734_4552 PF01510 N-acetylmuramoyl-L-alanine amidase XHV734_4553 PF01427 D-ala-D-ala dipeptidase XHV734_4564 PF07063 Domain of unknown function (DUF1338) XHV734_4567 PF13520 Amino acid permease XHV734_4570 PF05360 yiaA/B two helix domain XHV734_4571 PF07995 Glucose / Sorbosone dehydrogenase XHV734_4574 PF00933 Glycosyl hydrolase family 3 N terminal domain XHV734_4574 PF14310 Fibronectin type III-like domain XHV734_4574 PF01915 Glycosyl hydrolase family 3 C-terminal domain XHV734_4575 PF02152 Dihydroneopterin aldolase XHV734_4576 PF00814 Glycoprotease family XHV734_4577 PF01165 Ribosomal protein S21 XHV734_4578 PF09424 Yqey-like protein XHV734_4579 PF03631 Virulence factor BrkB XHV734_4580 PF08278 DNA primase DnaG DnaB-binding XHV734_4580 PF08275 DNA primase catalytic core, N-terminal domain XHV734_4580 PF01807 CHC2 zinc finger XHV734_4580 PF10410 DnaB-helicase binding domain of primase XHV734_4581 PF13593 SBF-like CPA transporter family (DUF4137) XHV734_4584 PF01040 UbiA prenyltransferase family XHV734_4589 PF00510 Cytochrome c oxidase subunit III XHV734_4590 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 XHV734_4592 PF00115 Cytochrome C and Quinol oxidase polypeptide I XHV734_4593 PF02790 Cytochrome C oxidase subunit II, transmembrane domain XHV734_4593 PF00116 Cytochrome C oxidase subunit II, periplasmic domain XHV734_4595 PF00171 Aldehyde dehydrogenase family XHV734_4595 PF18327 Proline utilization A proline dehydrogenase N-terminal domain XHV734_4595 PF01619 Proline dehydrogenase XHV734_4595 PF14850 DNA-binding domain of Proline dehydrogenase XHV734_4601 PF00579 tRNA synthetases class I (W and Y) XHV734_4602 PF04225 Opacity-associated protein A LysM-like domain XHV734_4602 PF01551 Peptidase family M23 XHV734_4604 PF03702 Anhydro-N-acetylmuramic acid kinase XHV734_4608 PF07690 Major Facilitator Superfamily XHV734_4609 PF03372 Endonuclease/Exonuclease/phosphatase family XHV734_4610 PF00156 Phosphoribosyl transferase domain XHV734_4612 PF13614 AAA domain XHV734_4613 PF17762 HTH domain found in ParB protein XHV734_4613 PF02195 ParB-like nuclease domain XHV734_4615 PF01370 NAD dependent epimerase/dehydratase family XHV734_4616 PF00535 Glycosyl transferase family 2 XHV734_4619 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XHV734_4619 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XHV734_4619 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XHV734_4619 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XHV734_4620 PF00692 dUTPase XHV734_4621 PF02441 Flavoprotein XHV734_4621 PF04127 DNA / pantothenate metabolism flavoprotein XHV734_4622 PF04002 RadC-like JAB domain XHV734_4623 PF00750 tRNA synthetases class I (R) XHV734_4623 PF03485 Arginyl tRNA synthetase N terminal domain XHV734_4623 PF05746 DALR anticodon binding domain XHV734_4625 PF00106 short chain dehydrogenase XHV734_4626 PF01757 Acyltransferase family XHV734_4627 PF03033 Glycosyltransferase family 28 N-terminal domain XHV734_4628 PF00975 Thioesterase domain XHV734_4628 PF13193 AMP-binding enzyme C-terminal domain XHV734_4628 PF00668 Condensation domain XHV734_4628 PF00501 AMP-binding enzyme XHV734_4628 PF00550 Phosphopantetheine attachment site XHV734_4629 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XHV734_4629 PF17944 Arginine decarboxylase C-terminal helical extension XHV734_4629 PF17810 Arginine decarboxylase helical bundle domain XHV734_4630 PF17284 Spermidine synthase tetramerisation domain XHV734_4636 PF00543 Nitrogen regulatory protein P-II XHV734_4637 PF04380 Membrane fusogenic activity XHV734_4638 PF13335 Magnesium chelatase, subunit ChlI C-terminal XHV734_4638 PF01078 Magnesium chelatase, subunit ChlI XHV734_4643 PF12792 CSS motif domain associated with EAL XHV734_4643 PF00563 EAL domain XHV734_4644 PF00487 Fatty acid desaturase XHV734_4646 PF00175 Oxidoreductase NAD-binding domain XHV734_4646 PF00111 2Fe-2S iron-sulfur cluster binding domain XHV734_4646 PF00970 Oxidoreductase FAD-binding domain XHV734_4647 PF00440 Bacterial regulatory proteins, tetR family XHV734_4656 PF01370 NAD dependent epimerase/dehydratase family XHV734_4656 PF08338 Domain of unknown function (DUF1731) XHV734_4659 PF08521 Two-component sensor kinase N-terminal XHV734_4659 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_4659 PF00512 His Kinase A (phospho-acceptor) domain XHV734_4663 PF13180 PDZ domain XHV734_4663 PF00595 PDZ domain XHV734_4667 PF01594 AI-2E family transporter XHV734_4668 PF13419 Haloacid dehalogenase-like hydrolase XHV734_4669 PF00883 Cytosol aminopeptidase family, catalytic domain XHV734_4669 PF02789 Cytosol aminopeptidase family, N-terminal domain XHV734_4674 PF00196 Bacterial regulatory proteins, luxR family XHV734_4674 PF00072 Response regulator receiver domain XHV734_4675 PF07730 Histidine kinase XHV734_4676 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XHV734_4679 PF00005 ABC transporter XHV734_4684 PF00892 EamA-like transporter family XHV734_4685 PF00892 EamA-like transporter family XHV734_4690 PF00753 Metallo-beta-lactamase superfamily XHV734_4691 PF00579 tRNA synthetases class I (W and Y) XHV734_4692 PF05532 CsbD-like XHV734_4694 PF00491 Arginase family XHV734_4699 PF02223 Thymidylate kinase XHV734_4703 PF03309 Type III pantothenate kinase XHV734_4704 PF02237 Biotin protein ligase C terminal domain XHV734_4704 PF03099 Biotin/lipoate A/B protein ligase family XHV734_4704 PF08279 HTH domain XHV734_4706 PF06167 Glucose-regulated metallo-peptidase M90 XHV734_4709 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_4710 PF00072 Response regulator receiver domain XHV734_4710 PF00486 Transcriptional regulatory protein, C terminal XHV734_4712 PF01207 Dihydrouridine synthase (Dus) XHV734_4717 PF00199 Catalase XHV734_4717 PF06628 Catalase-related immune-responsive XHV734_4718 PF06733 DEAD_2 XHV734_4718 PF13307 Helicase C-terminal domain XHV734_4721 PF08501 Shikimate dehydrogenase substrate binding domain XHV734_4721 PF01488 Shikimate / quinate 5-dehydrogenase XHV734_4721 PF18317 Shikimate 5'-dehydrogenase C-terminal domain XHV734_4725 PF00175 Oxidoreductase NAD-binding domain XHV734_4725 PF00258 Flavodoxin XHV734_4725 PF00667 FAD binding domain XHV734_4726 PF00490 Delta-aminolevulinic acid dehydratase XHV734_4731 PF00326 Prolyl oligopeptidase family XHV734_4731 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region XHV734_4732 PF02798 Glutathione S-transferase, N-terminal domain XHV734_4732 PF00043 Glutathione S-transferase, C-terminal domain XHV734_4736 PF04820 Tryptophan halogenase XHV734_4740 PF00005 ABC transporter XHV734_4742 PF01381 Helix-turn-helix XHV734_4744 PF01229 Glycosyl hydrolases family 39 XHV734_4745 PF02583 Metal-sensitive transcriptional repressor XHV734_4746 PF01545 Cation efflux family XHV734_4747 PF00175 Oxidoreductase NAD-binding domain XHV734_4747 PF00111 2Fe-2S iron-sulfur cluster binding domain XHV734_4747 PF00970 Oxidoreductase FAD-binding domain XHV734_4748 PF00005 ABC transporter XHV734_4749 PF01061 ABC-2 type transporter XHV734_4751 PF02558 Ketopantoate reductase PanE/ApbA XHV734_4751 PF08546 Ketopantoate reductase PanE/ApbA C terminal XHV734_4755 PF03061 Thioesterase superfamily XHV734_4758 PF00268 Ribonucleotide reductase, small chain XHV734_4759 PF00317 Ribonucleotide reductase, all-alpha domain XHV734_4759 PF02867 Ribonucleotide reductase, barrel domain XHV734_4759 PF03477 ATP cone domain XHV734_4762 PF00583 Acetyltransferase (GNAT) family XHV734_4762 PF13607 Succinyl-CoA ligase like flavodoxin domain XHV734_4762 PF13380 CoA binding domain XHV734_4765 PF00593 TonB dependent receptor XHV734_4765 PF07715 TonB-dependent Receptor Plug Domain XHV734_4765 PF04886 PT repeat XHV734_4766 PF03448 MgtE intracellular N domain XHV734_4766 PF01769 Divalent cation transporter XHV734_4766 PF00571 CBS domain XHV734_4768 PF02254 TrkA-N domain XHV734_4768 PF00999 Sodium/hydrogen exchanger family XHV734_4769 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain XHV734_4769 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain XHV734_4770 PF00723 Glycosyl hydrolases family 15 XHV734_4773 PF05166 YcgL domain XHV734_4774 PF02801 Beta-ketoacyl synthase, C-terminal domain XHV734_4774 PF00109 Beta-ketoacyl synthase, N-terminal domain XHV734_4777 PF04820 Tryptophan halogenase XHV734_4785 PF07977 FabA-like domain XHV734_4786 PF01553 Acyltransferase XHV734_4788 PF00550 Phosphopantetheine attachment site XHV734_4789 PF04820 Tryptophan halogenase XHV734_4791 PF13193 AMP-binding enzyme C-terminal domain XHV734_4791 PF00501 AMP-binding enzyme XHV734_4797 PF01218 Coproporphyrinogen III oxidase XHV734_4799 PF01612 3'-5' exonuclease XHV734_4799 PF00476 DNA polymerase family A XHV734_4799 PF01367 5'-3' exonuclease, C-terminal SAM fold XHV734_4799 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain XHV734_4801 PF03793 PASTA domain XHV734_4801 PF00069 Protein kinase domain XHV734_4805 PF01734 Patatin-like phospholipase XHV734_4809 PF14602 Hexapeptide repeat of succinyl-transferase XHV734_4809 PF12464 Maltose acetyltransferase XHV734_4812 PF13361 UvrD-like helicase C-terminal domain XHV734_4812 PF00580 UvrD/REP helicase N-terminal domain XHV734_4815 PF13091 PLD-like domain XHV734_4815 PF13396 Phospholipase_D-nuclease N-terminal XHV734_4816 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_4816 PF03466 LysR substrate binding domain XHV734_4817 PF03737 Aldolase/RraA XHV734_4818 PF04303 PrpF protein XHV734_4819 PF04909 Amidohydrolase XHV734_4821 PF00471 Ribosomal protein L33 XHV734_4823 PF00830 Ribosomal L28 family XHV734_4824 PF00873 AcrB/AcrD/AcrF family XHV734_4825 PF13533 Biotin-lipoyl like XHV734_4829 PF05598 Transposase domain (DUF772) XHV734_4829 PF01609 Transposase DDE domain XHV734_4832 PF02527 rRNA small subunit methyltransferase G XHV734_4834 PF09423 PhoD-like phosphatase XHV734_4834 PF16655 PhoD-like phosphatase, N-terminal domain XHV734_4835 PF16655 PhoD-like phosphatase, N-terminal domain XHV734_4835 PF09423 PhoD-like phosphatase XHV734_4836 PF01648 4'-phosphopantetheinyl transferase superfamily XHV734_4837 PF04226 Transglycosylase associated protein XHV734_4839 PF03372 Endonuclease/Exonuclease/phosphatase family XHV734_4842 PF00480 ROK family XHV734_4845 PF00639 PPIC-type PPIASE domain XHV734_4850 PF00474 Sodium:solute symporter family XHV734_4851 PF04341 Protein of unknown function, DUF485 XHV734_4853 PF13193 AMP-binding enzyme C-terminal domain XHV734_4853 PF16177 Acetyl-coenzyme A synthetase N-terminus XHV734_4853 PF00501 AMP-binding enzyme XHV734_4854 PF00196 Bacterial regulatory proteins, luxR family XHV734_4854 PF00072 Response regulator receiver domain XHV734_4862 PF00248 Aldo/keto reductase family XHV734_4865 PF01557 Fumarylacetoacetate (FAA) hydrolase family XHV734_4867 PF13378 Enolase C-terminal domain-like XHV734_4867 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XHV734_4869 PF05336 L-rhamnose mutarotase XHV734_4870 PF07690 Major Facilitator Superfamily XHV734_4871 PF01614 Bacterial transcriptional regulator XHV734_4871 PF09339 IclR helix-turn-helix domain XHV734_4874 PF02659 Putative manganese efflux pump XHV734_4875 PF00512 His Kinase A (phospho-acceptor) domain XHV734_4875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_4876 PF06165 Glycosyltransferase family 36 XHV734_4876 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain XHV734_4879 PF13570 PQQ-like domain XHV734_4879 PF13360 PQQ-like domain XHV734_4879 PF01011 PQQ enzyme repeat XHV734_4883 PF05598 Transposase domain (DUF772) XHV734_4883 PF01609 Transposase DDE domain XHV734_4884 PF05598 Transposase domain (DUF772) XHV734_4884 PF01609 Transposase DDE domain XHV734_4889 PF04357 TamB, inner membrane protein subunit of TAM complex XHV734_4890 PF17243 POTRA domain TamA domain 1 XHV734_4890 PF01103 Surface antigen XHV734_4891 PF05746 DALR anticodon binding domain XHV734_4891 PF02092 Glycyl-tRNA synthetase beta subunit XHV734_4892 PF02091 Glycyl-tRNA synthetase alpha subunit XHV734_4893 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XHV734_4893 PF00437 Type II/IV secretion system protein XHV734_4895 PF00958 GMP synthase C terminal domain XHV734_4895 PF00117 Glutamine amidotransferase class-I XHV734_4897 PF00902 Sec-independent protein translocase protein (TatC) XHV734_4898 PF02416 mttA/Hcf106 family XHV734_4899 PF02416 mttA/Hcf106 family XHV734_4901 PF00762 Ferrochelatase XHV734_4902 PF12697 Alpha/beta hydrolase family XHV734_4905 PF04381 Putative exonuclease, RdgC XHV734_4906 PF01171 PP-loop family XHV734_4909 PF00356 Bacterial regulatory proteins, lacI family XHV734_4911 PF03648 Glycosyl hydrolase family 67 N-terminus XHV734_4911 PF07477 Glycosyl hydrolase family 67 C-terminus XHV734_4911 PF07488 Glycosyl hydrolase family 67 middle domain XHV734_4913 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XHV734_4913 PF13378 Enolase C-terminal domain-like XHV734_4914 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain XHV734_4914 PF04616 Glycosyl hydrolases family 43 XHV734_4915 PF00933 Glycosyl hydrolase family 3 N terminal domain XHV734_4915 PF14310 Fibronectin type III-like domain XHV734_4915 PF01915 Glycosyl hydrolase family 3 C-terminal domain XHV734_4915 PF07691 PA14 domain XHV734_4916 PF01232 Mannitol dehydrogenase Rossmann domain XHV734_4916 PF08125 Mannitol dehydrogenase C-terminal domain XHV734_4922 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XHV734_4922 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XHV734_4923 PF02652 L-lactate permease XHV734_4926 PF08450 SMP-30/Gluconolactonase/LRE-like region XHV734_4927 PF00331 Glycosyl hydrolase family 10 XHV734_4928 PF00150 Cellulase (glycosyl hydrolase family 5) XHV734_4928 PF00942 Cellulose binding domain XHV734_4928 PF00331 Glycosyl hydrolase family 10 XHV734_4929 PF02836 Glycosyl hydrolases family 2, TIM barrel domain XHV734_4929 PF16355 Domain of unknown function (DUF4982) XHV734_4929 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 XHV734_4929 PF00703 Glycosyl hydrolases family 2 XHV734_4929 PF02837 Glycosyl hydrolases family 2, sugar binding domain XHV734_4930 PF02614 Glucuronate isomerase XHV734_4931 PF00553 Cellulose binding domain XHV734_4931 PF03422 Carbohydrate binding module (family 6) XHV734_4931 PF00331 Glycosyl hydrolase family 10 XHV734_4935 PF04616 Glycosyl hydrolases family 43 XHV734_4942 PF08240 Alcohol dehydrogenase GroES-like domain XHV734_4942 PF00107 Zinc-binding dehydrogenase XHV734_4942 PF16197 Ketoacyl-synthetase C-terminal extension XHV734_4942 PF00109 Beta-ketoacyl synthase, N-terminal domain XHV734_4942 PF02801 Beta-ketoacyl synthase, C-terminal domain XHV734_4942 PF08659 KR domain XHV734_4942 PF00550 Phosphopantetheine attachment site XHV734_4942 PF14765 Polyketide synthase dehydratase XHV734_4942 PF00698 Acyl transferase domain XHV734_4943 PF01553 Acyltransferase XHV734_4945 PF00356 Bacterial regulatory proteins, lacI family XHV734_4948 PF04820 Tryptophan halogenase XHV734_4949 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family XHV734_4950 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) XHV734_4951 PF04337 Protein of unknown function, DUF480 XHV734_4953 PF13302 Acetyltransferase (GNAT) domain XHV734_4954 PF00580 UvrD/REP helicase N-terminal domain XHV734_4954 PF13361 UvrD-like helicase C-terminal domain XHV734_4955 PF00265 Thymidine kinase XHV734_4956 PF08446 PAS fold XHV734_4956 PF00512 His Kinase A (phospho-acceptor) domain XHV734_4956 PF00360 Phytochrome region XHV734_4956 PF01590 GAF domain XHV734_4956 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XHV734_4957 PF04349 Periplasmic glucan biosynthesis protein, MdoG XHV734_4959 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain XHV734_4959 PF06827 Zinc finger found in FPG and IleRS XHV734_4959 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain XHV734_4965 PF03594 Benzoate membrane transport protein XHV734_4966 PF00360 Phytochrome region XHV734_4966 PF13426 PAS domain XHV734_4966 PF08446 PAS fold XHV734_4966 PF01590 GAF domain XHV734_4967 PF01126 Heme oxygenase XHV734_4968 PF07690 Major Facilitator Superfamily XHV734_4969 PF01263 Aldose 1-epimerase XHV734_4971 PF02810 SEC-C motif XHV734_4972 PF01925 Sulfite exporter TauE/SafE XHV734_4973 PF07715 TonB-dependent Receptor Plug Domain XHV734_4973 PF00593 TonB dependent receptor XHV734_4979 PF01227 GTP cyclohydrolase I XHV734_4981 PF07869 Protein of unknown function (DUF1656) XHV734_4982 PF00529 HlyD membrane-fusion protein of T1SS XHV734_4982 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XHV734_4983 PF02321 Outer membrane efflux protein XHV734_4984 PF04632 Fusaric acid resistance protein family XHV734_4986 PF00083 Sugar (and other) transporter XHV734_4987 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XHV734_4987 PF03466 LysR substrate binding domain XHV734_4988 PF00106 short chain dehydrogenase XHV734_4991 PF13396 Phospholipase_D-nuclease N-terminal XHV734_4991 PF13091 PLD-like domain XHV734_4997 PF13614 AAA domain XHV734_4999 PF13657 HipA N-terminal domain XHV734_4999 PF07804 HipA-like C-terminal domain XHV734_5011 PF05598 Transposase domain (DUF772) XHV734_5011 PF01609 Transposase DDE domain XHV734_5020 PF00849 RNA pseudouridylate synthase XHV734_5027 PF06719 AraC-type transcriptional regulator N-terminus XHV734_5027 PF12833 Helix-turn-helix domain XHV734_5029 PF01381 Helix-turn-helix XHV734_5030 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB XHV734_5033 PF13538 UvrD-like helicase C-terminal domain XHV734_5034 PF13361 UvrD-like helicase C-terminal domain XHV734_5034 PF00580 UvrD/REP helicase N-terminal domain XHV734_5034 PF12705 PD-(D/E)XK nuclease superfamily XHV734_5035 PF17946 RecC C-terminal domain XHV734_5036 PF00005 ABC transporter XHV734_5037 PF02405 Permease MlaE XHV734_5038 PF02470 MlaD protein XHV734_5039 PF05494 MlaC protein XHV734_5041 PF04333 MlaA lipoprotein XHV734_5045 PF00732 GMC oxidoreductase XHV734_5045 PF05199 GMC oxidoreductase XHV734_5047 PF00255 Glutathione peroxidase XHV734_5050 PF02646 RmuC family XHV734_5053 PF13417 Glutathione S-transferase, N-terminal domain XHV734_5053 PF00043 Glutathione S-transferase, C-terminal domain XHV734_5054 PF13520 Amino acid permease XHV734_5055 PF07971 Glycosyl hydrolase family 92 XHV734_5055 PF17678 Glycosyl hydrolase family 92 N-terminal domain XHV734_5058 PF00990 Diguanylate cyclase, GGDEF domain XHV734_5060 PF17853 GGDEF-like domain XHV734_5060 PF13556 PucR C-terminal helix-turn-helix domain XHV734_5060 PF05651 Putative sugar diacid recognition XHV734_5062 PF02595 Glycerate kinase family XHV734_5063 PF07690 Major Facilitator Superfamily XHV734_5067 PF01804 Penicillin amidase XHV734_5068 PF00593 TonB dependent receptor XHV734_5068 PF07715 TonB-dependent Receptor Plug Domain XHV734_5072 PF00497 Bacterial extracellular solute-binding proteins, family 3 XHV734_5073 PF00005 ABC transporter XHV734_5075 PF07687 Peptidase dimerisation domain XHV734_5075 PF01546 Peptidase family M20/M25/M40 XHV734_5076 PF00296 Luciferase-like monooxygenase XHV734_5077 PF00296 Luciferase-like monooxygenase XHV734_5080 PF00593 TonB dependent receptor XHV734_5080 PF07715 TonB-dependent Receptor Plug Domain XHV734_5081 PF01965 DJ-1/PfpI family XHV734_5084 PF10672 S-adenosylmethionine-dependent methyltransferase XHV734_5084 PF17785 PUA-like domain XHV734_5085 PF03741 Integral membrane protein TerC family XHV734_5087 PF01694 Rhomboid family XHV734_5088 PF03009 Glycerophosphoryl diester phosphodiesterase family XHV734_5091 PF01569 PAP2 superfamily XHV734_5092 PF01926 50S ribosome-binding GTPase XHV734_5092 PF12631 MnmE helical domain XHV734_5092 PF10396 GTP-binding protein TrmE N-terminus XHV734_5093 PF14849 YidC periplasmic domain XHV734_5093 PF02096 60Kd inner membrane protein XHV734_5094 PF00825 Ribonuclease P XHV734_5095 PF00468 Ribosomal protein L34 XHV734_p0005 PF00239 Resolvase, N terminal domain XHV734_p0005 PF02796 Helix-turn-helix domain of resolvase XHV734_p0009 PF13333 Integrase core domain XHV734_p0009 PF00665 Integrase core domain XHV734_p0009 PF13276 HTH-like domain XHV734_p0010 PF01527 Transposase XHV734_p0012 PF00239 Resolvase, N terminal domain XHV734_p0012 PF02796 Helix-turn-helix domain of resolvase XHV734_p0013 PF00239 Resolvase, N terminal domain XHV734_p0013 PF02796 Helix-turn-helix domain of resolvase XHV734_p0020 PF13276 HTH-like domain XHV734_p0020 PF13683 Integrase core domain XHV734_p0021 PF01527 Transposase XHV734_p0025 PF02796 Helix-turn-helix domain of resolvase XHV734_p0025 PF00239 Resolvase, N terminal domain XHV734_p0030 PF03230 Antirestriction protein XHV734_p0033 PF02661 Fic/DOC family XHV734_p0033 PF17841 BID domain of Bartonella effector protein (Bep) XHV734_p0034 PF18495 Antitoxin VbhA XHV734_p0039 PF06067 Domain of unknown function (DUF932) XHV734_p0043 PF00872 Transposase, Mutator family XHV734_p0051 PF11740 Plasmid replication region DNA-binding N-term XHV734_p0072 PF09722 Protein of unknown function (DUF2384) XHV734_p0072 PF01936 NYN domain XHV734_p0079 PF13936 Helix-turn-helix domain XHV734_p0079 PF00665 Integrase core domain XHV734_p0083 PF03377 TAL effector repeat