locus-tag	class	description
EYC56_00025	COG0187	DNA topoisomerase II activity
EYC56_00035	COG0501	Belongs to the peptidase M48B family
EYC56_00065	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
EYC56_00115	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
EYC56_00125	COG0793	Belongs to the peptidase S41A family
EYC56_00130	COG4942	peptidase
EYC56_00140	COG2234	aminopeptidase activity
EYC56_00150	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
EYC56_00165	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
EYC56_00180	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
EYC56_00190	COG1064	alcohol dehydrogenase
EYC56_00205	COG0493	'glutamate synthase
EYC56_00210	COG0067	glutamate synthase
EYC56_00210	COG0070	glutamate synthase
EYC56_00210	COG0069	glutamate synthase activity
EYC56_00270	COG1205	dead DEAH box helicase
EYC56_00270	COG1111	helicase
EYC56_00275	COG1272	protein, Hemolysin III
EYC56_00300	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
EYC56_00310	COG4772	TonB-dependent receptor
EYC56_00325	COG3039	Transposase
EYC56_00335	COG1755	Isoprenylcysteine carboxyl methyltransferase
EYC56_00365	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
EYC56_00400	COG0477	Major facilitator Superfamily
EYC56_00410	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
EYC56_00425	COG2826	transposase and inactivated derivatives, IS30 family
EYC56_00470	COG3237	CsbD-like
EYC56_00565	COG3039	Transposase
EYC56_00585	COG0246	Mannitol dehydrogenase
EYC56_00590	COG1472	Belongs to the glycosyl hydrolase 3 family
EYC56_00600	COG4948	Mandelate Racemase Muconate Lactonizing
EYC56_00610	COG3661	Belongs to the glycosyl hydrolase 67 family
EYC56_00630	COG0037	tRNA processing
EYC56_00635	COG2974	May be involved in recombination
EYC56_00660	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
EYC56_00670	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
EYC56_00675	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
EYC56_00680	COG0805	protein transport
EYC56_00690	COG0518	GMP synthase (glutamine-hydrolyzing) activity
EYC56_00690	COG0519	Catalyzes the synthesis of GMP from XMP
EYC56_00705	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
EYC56_00710	COG0752	glycyl-tRNA synthetase alpha subunit
EYC56_00725	COG0457	Tetratricopeptide repeat
EYC56_00730	COG4771	TonB-dependent receptor
EYC56_00735	COG0729	surface antigen
EYC56_00740	COG2911	Protein conserved in bacteria
EYC56_00755	COG0443	Heat shock 70 kDa protein
EYC56_00780	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
EYC56_00795	COG3265	gluconokinase activity
EYC56_00800	COG2211	Major facilitator Superfamily
EYC56_00805	COG3459	Glycosyltransferase 36 associated
EYC56_00815	COG2205	protein histidine kinase activity
EYC56_00825	COG1414	Transcriptional regulator
EYC56_00830	COG0738	Major facilitator superfamily
EYC56_00835	COG3254	rhamnose metabolic process
EYC56_00840	COG4948	Mandelate Racemase Muconate Lactonizing
EYC56_00850	COG0179	Fumarylacetoacetate (FAA) hydrolase
EYC56_00855	COG1028	Short-chain dehydrogenase reductase Sdr
EYC56_00875	COG3507	Belongs to the glycosyl hydrolase 43 family
EYC56_00910	COG3162	membrane
EYC56_00915	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
EYC56_00930	COG0708	Exodeoxyribonuclease III
EYC56_00945	COG2091	lysine biosynthetic process via aminoadipic acid
EYC56_00955	COG3540	Alkaline phosphatase
EYC56_00960	COG0357	Ribosomal RNA small subunit methyltransferase G
EYC56_00975	COG0227	Belongs to the bacterial ribosomal protein bL28 family
EYC56_00980	COG0267	Belongs to the bacterial ribosomal protein bL33 family
EYC56_00985	COG2159	amidohydrolase
EYC56_01000	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
EYC56_01005	COG0583	DNA-binding transcription factor activity
EYC56_01010	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
EYC56_01030	COG0210	DNA helicase
EYC56_01155	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
EYC56_01170	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
EYC56_01215	COG1028	Short-chain dehydrogenase reductase Sdr
EYC56_01230	COG0463	Glycosyl transferase, family 2
EYC56_01240	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
EYC56_01245	COG3100	YcgL domain-containing protein
EYC56_01260	COG3387	PFAM Glycoside hydrolase 15-related
EYC56_01265	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
EYC56_01295	COG2239	Acts as a magnesium transporter
EYC56_01305	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
EYC56_01305	COG1042	CoA-binding domain protein
EYC56_01305	COG0045	succinate-CoA ligase (ADP-forming) activity
EYC56_01320	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
EYC56_01330	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
EYC56_01390	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
EYC56_01395	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
EYC56_01400	COG4786	Flagellar basal body rod
EYC56_01405	COG4786	Flagellar basal body rod
EYC56_01420	COG1706	bacterial-type flagellum-dependent cell motility
EYC56_01430	COG1558	bacterial-type flagellum-dependent cell motility
EYC56_01435	COG1677	Flagellar hook-basal body complex protein FliE
EYC56_01440	COG1766	The M ring may be actively involved in energy transduction
EYC56_01455	COG1157	protein secretion by the type III secretion system
EYC56_01470	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
EYC56_01475	COG1749	Flagellar hook protein flgE
EYC56_01500	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
EYC56_01505	COG3039	Transposase
EYC56_01515	COG3039	Transposase
EYC56_01520	COG0028	Belongs to the TPP enzyme family
EYC56_01525	COG4191	Histidine kinase
EYC56_01550	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
EYC56_01565	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
EYC56_01575	COG0596	Alpha beta hydrolase
EYC56_01585	COG0318	PFAM AMP-dependent synthetase and ligase
EYC56_01590	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
EYC56_01605	COG1181	Belongs to the D-alanine--D-alanine ligase family
EYC56_01635	COG0564	pseudouridine synthase activity
EYC56_01665	COG0339	signal peptide processing
EYC56_01680	COG3706	GGDEF domain
EYC56_01715	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
EYC56_01720	COG1960	acyl-CoA dehydrogenase activity
EYC56_01770	COG0523	cobalamin synthesis protein
EYC56_01785	COG0697	spore germination
EYC56_01795	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
EYC56_01800	COG1846	Transcriptional regulator
EYC56_01805	COG1764	response to oxidative stress
EYC56_01835	COG0656	L-ascorbic acid biosynthetic process
EYC56_01840	COG2130	NADP-dependent
EYC56_01845	COG0667	Aldo Keto reductase
EYC56_01855	COG1187	pseudouridine synthase activity
EYC56_01870	COG1643	Atp-dependent helicase
EYC56_01880	COG4807	Protein conserved in bacteria
EYC56_01885	COG2072	flavoprotein involved in K transport
EYC56_01905	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
EYC56_01960	COG0084	hydrolase, TatD family'
EYC56_01980	COG0583	DNA-binding transcription factor activity
EYC56_01985	COG2814	Major facilitator Superfamily
EYC56_01995	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
EYC56_02000	COG1902	pentaerythritol trinitrate reductase activity
EYC56_02030	COG0745	RESPONSE REGULATOR receiver
EYC56_02050	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
EYC56_02055	COG0583	DNA-binding transcription factor activity
EYC56_02085	COG0702	epimerase
EYC56_02090	COG1733	regulation of RNA biosynthetic process
EYC56_02115	COG3039	Transposase
EYC56_02135	COG3501	Rhs element vgr protein
EYC56_02155	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
EYC56_02235	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
EYC56_02240	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
EYC56_02250	COG3485	protocatechuate 3,4-dioxygenase
EYC56_02255	COG3485	protocatechuate 3,4-dioxygenase
EYC56_02270	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
EYC56_02275	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
EYC56_02290	COG1414	Transcriptional regulator
EYC56_02380	COG1040	competence protein
EYC56_02385	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
EYC56_02480	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
EYC56_02555	COG1511	domain protein
EYC56_02555	COG3264	Mechanosensitive ion channel
EYC56_02570	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
EYC56_02580	COG2354	Protein conserved in bacteria
EYC56_02590	COG0745	RESPONSE REGULATOR receiver
EYC56_02590	COG3706	GGDEF domain
EYC56_02605	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
EYC56_02630	COG0702	epimerase
EYC56_02645	COG1858	cytochrome C peroxidase
EYC56_02705	COG4221	oxidoreductase activity
EYC56_02730	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
EYC56_02755	COG0463	Glycosyl transferase, family 2
EYC56_02770	COG1475	DNA binding
EYC56_02775	COG1192	Involved in chromosome partitioning
EYC56_02790	COG0708	Exodeoxyribonuclease III
EYC56_02795	COG2211	Major facilitator Superfamily
EYC56_02815	COG0739	heme binding
EYC56_02880	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
EYC56_02895	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
EYC56_02960	COG0358	DNA primase activity
EYC56_02965	COG1295	ribonuclease BN
EYC56_02985	COG0828	Belongs to the bacterial ribosomal protein bS21 family
EYC56_02995	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
EYC56_03015	COG2133	pyrroloquinoline quinone binding
EYC56_03020	COG4682	membrane
EYC56_03040	COG0531	amino acid
EYC56_03065	COG4948	Mandelate Racemase Muconate Lactonizing
EYC56_03075	COG3023	N-Acetylmuramoyl-L-alanine amidase
EYC56_03080	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
EYC56_03130	COG5383	Protein conserved in bacteria
EYC56_03160	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
EYC56_03165	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
EYC56_03170	COG1473	amidohydrolase
EYC56_03225	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
EYC56_03230	COG3118	belongs to the thioredoxin family
EYC56_03240	COG2884	Cell division ATP-binding protein ftsE
EYC56_03245	COG2177	Part of the ABC transporter FtsEX involved in
EYC56_03250	COG3437	response regulator, receiver
EYC56_03260	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
EYC56_03265	COG2860	membrane
EYC56_03270	COG1252	NADH dehydrogenase
EYC56_03290	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
EYC56_03310	COG3550	peptidyl-serine autophosphorylation
EYC56_03315	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
EYC56_03330	COG3386	PFAM SMP-30 Gluconolaconase
EYC56_03345	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
EYC56_03375	COG2353	YceI-like domain
EYC56_03480	COG4221	oxidoreductase activity
EYC56_03530	COG0697	spore germination
EYC56_03535	COG4305	rare lipoprotein A
EYC56_03540	COG5297	Belongs to the glycosyl hydrolase family 6
EYC56_03550	COG1113	amino acid transport
EYC56_03560	COG0598	Magnesium transport protein CorA
EYC56_03625	COG0840	transmembrane signaling receptor activity
EYC56_03635	COG5297	Belongs to the glycosyl hydrolase family 6
EYC56_03635	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
EYC56_03640	COG0659	secondary active sulfate transmembrane transporter activity
EYC56_03675	COG3275	phosphorelay sensor kinase activity
EYC56_03710	COG1505	serine-type exopeptidase activity
EYC56_03730	COG2832	Protein of unknown function (DUF454)
EYC56_03750	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
EYC56_03765	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
EYC56_03800	COG3300	MHYT domain
EYC56_03800	COG5001	Diguanylate cyclase
EYC56_03805	COG0308	aminopeptidase N
EYC56_03825	COG1077	Cell shape determining protein MreB Mrl
EYC56_03830	COG1792	Involved in formation and maintenance of cell shape
EYC56_03845	COG0772	Belongs to the SEDS family
EYC56_03895	COG2951	lytic endotransglycosylase activity
EYC56_03900	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
EYC56_03905	COG1686	Belongs to the peptidase S11 family
EYC56_03945	COG1056	cytidyltransferase-related domain
EYC56_03945	COG1051	belongs to the nudix hydrolase family
EYC56_03980	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
EYC56_03985	COG0673	inositol 2-dehydrogenase activity
EYC56_03990	COG2823	Periplasmic or secreted lipoprotein
EYC56_03995	COG4251	negative regulation of phosphorylation
EYC56_04000	COG0784	Response regulator, receiver
EYC56_04005	COG4191	Histidine kinase
EYC56_04010	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
EYC56_04045	COG3250	beta-galactosidase activity
EYC56_04070	COG1609	Transcriptional regulator
EYC56_04075	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
EYC56_04080	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
EYC56_04090	COG1215	transferase activity, transferring glycosyl groups
EYC56_04095	COG0726	polysaccharide deacetylase
EYC56_04095	COG1649	PFAM Uncharacterised BCR, COG1649
EYC56_04195	COG2205	protein histidine kinase activity
EYC56_04200	COG0745	RESPONSE REGULATOR receiver
EYC56_04245	COG0488	(ABC) transporter
EYC56_04275	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
EYC56_04285	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
EYC56_04285	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
EYC56_04315	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
EYC56_04340	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
EYC56_04345	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
EYC56_04355	COG2205	protein histidine kinase activity
EYC56_04360	COG0745	RESPONSE REGULATOR receiver
EYC56_04365	COG0277	FAD linked oxidase domain protein
EYC56_04370	COG1988	membrane-bound metal-dependent
EYC56_04410	COG3116	cell division
EYC56_04425	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
EYC56_04430	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
EYC56_04450	COG1181	Belongs to the D-alanine--D-alanine ligase family
EYC56_04455	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
EYC56_04480	COG4942	peptidase
EYC56_04480	COG1388	LysM domain
EYC56_04495	COG0494	nUDIX hydrolase
EYC56_04510	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
EYC56_04525	COG3321	synthase
EYC56_04525	COG1028	Short-chain dehydrogenase reductase Sdr
EYC56_04525	COG0604	alcohol dehydrogenase
EYC56_04600	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
EYC56_04645	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
EYC56_04660	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
EYC56_04670	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
EYC56_04675	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
EYC56_04685	COG0667	Aldo Keto reductase
EYC56_04710	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
EYC56_04715	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
EYC56_04725	COG2175	clavaminate synthase activity
EYC56_04735	COG4181	ATPase activity
EYC56_04750	COG0642	Histidine kinase
EYC56_04765	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
EYC56_04805	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
EYC56_04825	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
EYC56_04840	COG0123	including yeast histone deacetylase and acetoin utilization protein
EYC56_04845	COG2096	Adenosyltransferase
EYC56_04855	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
EYC56_04860	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
EYC56_04880	COG3039	Transposase
EYC56_04885	COG1802	Transcriptional regulator
EYC56_04895	COG3384	dioxygenase
EYC56_04900	COG0583	DNA-binding transcription factor activity
EYC56_04915	COG1024	Enoyl-CoA hydratase
EYC56_04935	COG3386	PFAM SMP-30 Gluconolaconase
EYC56_04965	COG0697	spore germination
EYC56_04995	COG0745	RESPONSE REGULATOR receiver
EYC56_04995	COG3706	GGDEF domain
EYC56_05005	COG2197	response regulator
EYC56_05015	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
EYC56_05020	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
EYC56_05035	COG0583	DNA-binding transcription factor activity
EYC56_05040	COG3634	alkyl hydroperoxide reductase activity
EYC56_05050	COG2890	protein-(glutamine-N5) methyltransferase activity
EYC56_05100	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
EYC56_05120	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
EYC56_05125	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
EYC56_05155	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
EYC56_05165	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
EYC56_05195	COG1295	ribonuclease BN
EYC56_05200	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
EYC56_05220	COG0521	Mo-molybdopterin cofactor biosynthetic process
EYC56_05235	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
EYC56_05260	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
EYC56_05275	COG0012	GTP binding
EYC56_05305	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
EYC56_05310	COG0250	Participates in transcription elongation, termination and antitermination
EYC56_05325	COG0081	regulation of translation
EYC56_05330	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
EYC56_05335	COG0222	ribosome binding
EYC56_05350	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
EYC56_05390	COG0089	rRNA binding
EYC56_05395	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
EYC56_05415	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
EYC56_05420	COG0255	Belongs to the universal ribosomal protein uL29 family
EYC56_05425	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
EYC56_05435	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
EYC56_05445	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
EYC56_05460	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
EYC56_05465	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
EYC56_05470	COG1841	ribosomal large subunit assembly
EYC56_05475	COG0200	Binds to the 23S rRNA
EYC56_05480	COG0201	protein transport
EYC56_05485	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
EYC56_05490	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
EYC56_05500	COG0202	RNA polymerase activity
EYC56_05505	COG0203	ribosomal protein L17
EYC56_05510	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
EYC56_05520	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
EYC56_05545	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
EYC56_05555	COG0625	glutathione transferase activity
EYC56_05565	COG0584	glycerophosphoryl diester phosphodiesterase
EYC56_05585	COG0446	pyridine nucleotide-disulphide oxidoreductase
EYC56_05585	COG1902	pentaerythritol trinitrate reductase activity
EYC56_05620	COG0156	8-amino-7-oxononanoate synthase activity
EYC56_05625	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
EYC56_05630	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
EYC56_05635	COG4208	sulfate ABC transporter
EYC56_05640	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
EYC56_05650	COG1063	alcohol dehydrogenase
EYC56_05675	COG0406	alpha-ribazole phosphatase activity
EYC56_05685	COG0285	dihydrofolate synthase activity
EYC56_05705	COG2833	Protein of unknown function (DUF455)
EYC56_05715	COG3291	Pkd domain containing protein
EYC56_05730	COG0671	phosphoesterase, PA-phosphatase related
EYC56_05735	COG0438	transferase activity, transferring glycosyl groups
EYC56_05745	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
EYC56_05760	COG4783	chaperone-mediated protein folding
EYC56_05780	COG0473	3-isopropylmalate dehydrogenase activity
EYC56_05825	COG3852	Histidine kinase
EYC56_05835	COG0544	peptidyl-prolyl cis-trans isomerase activity
EYC56_05840	COG0740	serine-type endopeptidase activity
EYC56_05875	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
EYC56_05900	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
EYC56_05905	COG0631	protein serine/threonine phosphatase activity
EYC56_05920	COG0859	PFAM glycosyl transferase family 9
EYC56_05930	COG1234	tRNA 3'-trailer cleavage
EYC56_05935	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
EYC56_05950	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
EYC56_05955	COG0314	molybdopterin synthase activity
EYC56_05990	COG3039	Transposase
EYC56_06020	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
EYC56_06030	COG0537	adenosine 5'-monophosphoramidase activity
EYC56_06050	COG0714	Associated with various cellular activities
EYC56_06070	COG1399	metal-binding, possibly nucleic acid-binding protein
EYC56_06095	COG1028	Short-chain dehydrogenase reductase Sdr
EYC56_06110	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
EYC56_06195	COG1028	Short-chain dehydrogenase reductase Sdr
EYC56_06210	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
EYC56_06215	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
EYC56_06245	COG3829	transcription factor binding
EYC56_06260	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
EYC56_06345	COG0330	HflC and HflK could
EYC56_06350	COG0330	HflC and HflK could
EYC56_06360	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
EYC56_06365	COG0308	aminopeptidase N
EYC56_06380	COG3501	Rhs element vgr protein
EYC56_06465	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
EYC56_06500	COG0732	type I restriction modification DNA specificity domain
EYC56_06590	COG0587	DNA-directed DNA polymerase activity
EYC56_06610	COG1297	OPT oligopeptide transporter protein
EYC56_06630	COG1506	peptidase
EYC56_06630	COG0823	Involved in the tonB-independent uptake of proteins
EYC56_06640	COG1917	Cupin 2, conserved barrel domain protein
EYC56_06640	COG2207	Transcriptional regulator
EYC56_06680	COG0753	catalase activity
EYC56_06715	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
EYC56_06715	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
EYC56_06725	COG3551	Protein conserved in bacteria
EYC56_06755	COG2194	sulfuric ester hydrolase activity
EYC56_06765	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
EYC56_06770	COG0745	RESPONSE REGULATOR receiver
EYC56_06775	COG0642	Histidine kinase
EYC56_06785	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
EYC56_06790	COG2894	cell division
EYC56_06805	COG4585	Histidine kinase
EYC56_06810	COG2197	response regulator
EYC56_06825	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
EYC56_06850	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
EYC56_06855	COG2963	transposase activity
EYC56_06905	COG3501	Rhs element vgr protein
EYC56_06935	COG3501	Rhs element vgr protein
EYC56_06945	COG1262	PFAM Formylglycine-generating sulfatase enzyme
EYC56_06955	COG1262	PFAM Formylglycine-generating sulfatase enzyme
EYC56_06965	COG1262	PFAM Formylglycine-generating sulfatase enzyme
EYC56_07000	COG1262	PFAM Formylglycine-generating sulfatase enzyme
EYC56_07005	COG3501	Rhs element vgr protein
EYC56_07060	COG3501	Rhs element vgr protein
EYC56_07080	COG3179	chitinase
EYC56_07105	COG3501	Rhs element vgr protein
EYC56_07140	COG3501	Rhs element vgr protein
EYC56_07200	COG3501	Rhs element vgr protein
EYC56_07255	COG3501	Rhs element vgr protein
EYC56_07320	COG3501	Rhs element vgr protein
EYC56_07395	COG1842	Phage shock protein A
EYC56_07420	COG0754	glutathionylspermidine amidase activity
EYC56_07435	COG0789	Transcriptional regulator
EYC56_07490	COG0531	amino acid
EYC56_07495	COG2197	response regulator
EYC56_07510	COG1113	amino acid transport
EYC56_07520	COG1271	oxidase subunit
EYC56_07525	COG1294	oxidase, subunit
EYC56_07535	COG2239	Acts as a magnesium transporter
EYC56_07545	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
EYC56_07550	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
EYC56_07570	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
EYC56_07585	COG1137	ATPase activity
EYC56_07590	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
EYC56_07600	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
EYC56_07610	COG0271	Belongs to the BolA IbaG family
EYC56_07620	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
EYC56_07640	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
EYC56_07665	COG0628	permease
EYC56_07675	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
EYC56_07680	COG3178	'Phosphotransferase
EYC56_07690	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
EYC56_07695	COG1555	photosystem II stabilization
EYC56_07710	COG3039	Transposase
EYC56_07735	COG3039	Transposase
EYC56_07750	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
EYC56_07755	COG0719	Fe-S assembly protein
EYC56_07760	COG0396	ATPase activity
EYC56_07765	COG0719	Fe-S assembly protein
EYC56_07770	COG1959	2 iron, 2 sulfur cluster binding
EYC56_07825	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
EYC56_07855	COG0519	Catalyzes the synthesis of GMP from XMP
EYC56_07870	COG1678	Uncharacterized ACR, COG1678
EYC56_07880	COG0540	Belongs to the ATCase OTCase family
EYC56_07895	COG1764	response to oxidative stress
EYC56_07905	COG0384	phenazine biosynthesis protein PhzF
EYC56_07915	COG0527	aspartate kinase activity
EYC56_07945	COG0142	geranyltranstransferase activity
EYC56_07950	COG0629	single-stranded DNA binding
EYC56_07960	COG2801	Transposase and inactivated derivatives
EYC56_07990	COG2203	Gaf domain
EYC56_07990	COG3706	GGDEF domain
EYC56_07990	COG4251	negative regulation of phosphorylation
EYC56_07990	COG5001	Diguanylate cyclase
EYC56_08000	COG2080	2 iron, 2 sulfur cluster binding
EYC56_08005	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
EYC56_08010	COG1529	Aldehyde oxidase and xanthine dehydrogenase
EYC56_08015	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
EYC56_08075	COG2879	small protein
EYC56_08080	COG1966	Carbon starvation protein
EYC56_08085	COG1741	Belongs to the pirin family
EYC56_08095	COG3501	Rhs element vgr protein
EYC56_08155	COG3501	Rhs element vgr protein
EYC56_08200	COG2826	transposase and inactivated derivatives, IS30 family
EYC56_08240	COG1741	Belongs to the pirin family
EYC56_08250	COG1515	deoxyribonuclease V activity
EYC56_08285	COG3501	Rhs element vgr protein
EYC56_08300	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
EYC56_08305	COG2199	diguanylate cyclase activity
EYC56_08305	COG2200	EAL domain
EYC56_08305	COG2202	Pas domain
EYC56_08310	COG0835	chemotaxis
EYC56_08315	COG0840	transmembrane signaling receptor activity
EYC56_08325	COG0643	Histidine kinase
EYC56_08325	COG2198	Histidine kinase
EYC56_08335	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
EYC56_08345	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
EYC56_08385	COG0735	belongs to the Fur family
EYC56_08470	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
EYC56_08520	COG5001	Diguanylate cyclase
EYC56_08520	COG5002	protein histidine kinase activity
EYC56_08525	COG1187	pseudouridine synthase activity
EYC56_08550	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
EYC56_08555	COG0475	glutathione-regulated potassium exporter activity
EYC56_08560	COG5002	protein histidine kinase activity
EYC56_08560	COG5000	phosphorelay sensor kinase activity
EYC56_08565	COG0745	RESPONSE REGULATOR receiver
EYC56_08595	COG1132	(ABC) transporter
EYC56_08675	COG3118	belongs to the thioredoxin family
EYC56_08705	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
EYC56_08755	COG2968	Membrane
EYC56_08765	COG1530	ribonuclease E activity
EYC56_08770	COG3164	Protein of unknown function
EYC56_08780	COG0312	modulator of DNA gyrase
EYC56_08790	COG0312	modulator of DNA gyrase
EYC56_08805	COG4104	PAAR repeat-containing protein
EYC56_08810	COG0142	geranyltranstransferase activity
EYC56_08815	COG1722	exodeoxyribonuclease VII activity
EYC56_08820	COG0037	tRNA processing
EYC56_08825	COG1785	Belongs to the alkaline phosphatase family
EYC56_08830	COG1301	dicarboxylic acid transport
EYC56_08835	COG4106	trans-aconitate 2-methyltransferase activity
EYC56_08850	COG0791	NLP P60 protein
EYC56_08855	COG0791	NLP P60 protein
EYC56_08860	COG1047	Peptidyl-prolyl cis-trans
EYC56_08865	COG2311	Membrane
EYC56_08870	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
EYC56_08945	COG3039	Transposase
EYC56_08950	COG0489	protein tyrosine kinase activity
EYC56_08985	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
EYC56_09000	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
EYC56_09025	COG0433	COG0433 Predicted ATPase
EYC56_09055	COG2890	protein-(glutamine-N5) methyltransferase activity
EYC56_09065	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
EYC56_09070	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
EYC56_09105	COG0133	tryptophan synthase activity
EYC56_09160	COG1028	Short-chain dehydrogenase reductase Sdr
EYC56_09180	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
EYC56_09200	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
EYC56_09205	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
EYC56_09210	COG1034	ATP synthesis coupled electron transport
EYC56_09215	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
EYC56_09230	COG0713	ATP synthesis coupled electron transport
EYC56_09245	COG1007	ATP synthesis coupled electron transport
EYC56_09260	COG0195	Participates in both transcription termination and antitermination
EYC56_09265	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
EYC56_09280	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
EYC56_09315	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
EYC56_09320	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
EYC56_09330	COG2095	MarC family integral membrane protein
EYC56_09345	COG1611	Belongs to the LOG family
EYC56_09385	COG4969	Belongs to the N-Me-Phe pilin family
EYC56_09390	COG0556	nucleotide-excision repair
EYC56_09425	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
EYC56_09430	COG0291	Belongs to the bacterial ribosomal protein bL35 family
EYC56_09435	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
EYC56_09440	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
EYC56_09450	COG0776	regulation of translation
EYC56_09495	COG0438	transferase activity, transferring glycosyl groups
EYC56_09500	COG0438	transferase activity, transferring glycosyl groups
EYC56_09550	COG1960	acyl-CoA dehydrogenase activity
EYC56_09560	COG3040	lipid binding
EYC56_09580	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
EYC56_09585	COG4191	Histidine kinase
EYC56_09585	COG0784	Response regulator, receiver
EYC56_09595	COG1194	a g-specific adenine glycosylase
EYC56_09610	COG0552	protein localization to endoplasmic reticulum
EYC56_09620	COG3938	Belongs to the proline racemase family
EYC56_09625	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
EYC56_09640	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
EYC56_09650	COG0006	proline dipeptidase activity
EYC56_09665	COG0531	amino acid
EYC56_09715	COG4206	TonB-dependent receptor
EYC56_09770	COG0326	Molecular chaperone. Has ATPase activity
EYC56_09775	COG0742	ribosomal rna small subunit methyltransferase
EYC56_09795	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
EYC56_09800	COG0405	Gamma-glutamyltransferase
EYC56_09860	COG1862	Preprotein translocase
EYC56_09870	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
EYC56_09900	COG2826	transposase and inactivated derivatives, IS30 family
EYC56_09910	COG2131	deaminase
EYC56_09975	COG3501	Rhs element vgr protein
EYC56_09985	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
EYC56_09985	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
EYC56_09990	COG1105	Belongs to the carbohydrate kinase PfkB family
EYC56_09995	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
EYC56_09995	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
EYC56_10000	COG1609	Transcriptional regulator
EYC56_10010	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
EYC56_10015	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
EYC56_10025	COG2902	Dehydrogenase
EYC56_10060	COG0784	Response regulator, receiver
EYC56_10060	COG2205	protein histidine kinase activity
EYC56_10060	COG5002	protein histidine kinase activity
EYC56_10065	COG2733	membrane
EYC56_10075	COG1121	(ABC) transporter
EYC56_10095	COG0243	molybdopterin cofactor binding
EYC56_10105	COG0477	Major facilitator Superfamily
EYC56_10110	COG0745	RESPONSE REGULATOR receiver
EYC56_10110	COG3706	GGDEF domain
EYC56_10115	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
EYC56_10120	COG0174	glutamine synthetase
EYC56_10125	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
EYC56_10155	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
EYC56_10175	COG3842	ATPase activity
EYC56_10185	COG1176	ABC-type spermidine putrescine transport system, permease component I
EYC56_10190	COG1177	transmembrane transport
EYC56_10200	COG1012	belongs to the aldehyde dehydrogenase family
EYC56_10215	COG4535	Mg2 and Co2 transporter CorC
EYC56_10235	COG1702	phosphate starvation-inducible protein PhoH
EYC56_10255	COG0741	lytic transglycosylase activity
EYC56_10260	COG0723	plastoquinol--plastocyanin reductase activity
EYC56_10265	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
EYC56_10270	COG2857	Cytochrome c1
EYC56_10275	COG0625	glutathione transferase activity
EYC56_10280	COG2969	positive regulation of protein catabolic process
EYC56_10310	COG0840	transmembrane signaling receptor activity
EYC56_10315	COG0835	chemotaxis
EYC56_10325	COG2801	Transposase and inactivated derivatives
EYC56_10425	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
EYC56_10495	COG1262	PFAM Formylglycine-generating sulfatase enzyme
EYC56_10515	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
EYC56_10520	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
EYC56_10520	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
EYC56_10525	COG0802	atpase or kinase
EYC56_10530	COG0860	N-Acetylmuramoyl-L-alanine amidase
EYC56_10560	COG1028	Short-chain dehydrogenase reductase Sdr
EYC56_10570	COG0501	Belongs to the peptidase M48B family
EYC56_10580	COG2081	HI0933 family
EYC56_10585	COG4681	YaeQ
EYC56_10600	COG0625	glutathione transferase activity
EYC56_10610	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
EYC56_10620	COG0513	Belongs to the DEAD box helicase family
EYC56_10655	COG0483	inositol monophosphate 1-phosphatase activity
EYC56_10670	COG3300	MHYT domain
EYC56_10670	COG5001	Diguanylate cyclase
EYC56_10675	COG1509	lysine 2,3-aminomutase activity
EYC56_10690	COG0402	S-adenosylhomocysteine deaminase activity
EYC56_10720	COG4677	pectinesterase activity
EYC56_10745	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
EYC56_10755	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
EYC56_10770	COG2166	iron-sulfur cluster assembly
EYC56_10790	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
EYC56_10795	COG0137	argininosuccinate synthase activity
EYC56_10800	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
EYC56_10805	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
EYC56_10875	COG1271	oxidase subunit
EYC56_10885	COG4988	ABC transporter
EYC56_10890	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
EYC56_10900	COG1278	Cold shock
EYC56_10950	COG4133	protoheme IX ABC transporter activity
EYC56_10955	COG0436	Aminotransferase
EYC56_10975	COG1187	pseudouridine synthase activity
EYC56_10980	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
EYC56_10985	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
EYC56_10990	COG2350	Protein conserved in bacteria
EYC56_11020	COG1175	transmembrane transport
EYC56_11025	COG0395	ABC-type sugar transport system, permease component
EYC56_11050	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
EYC56_11060	COG2957	Belongs to the agmatine deiminase family
EYC56_11070	COG0257	Belongs to the bacterial ribosomal protein bL36 family
EYC56_11075	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
EYC56_11080	COG0539	negative regulation of cytoplasmic translation
EYC56_11095	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
EYC56_11100	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
EYC56_11110	COG1210	Utp--glucose-1-phosphate uridylyltransferase
EYC56_11135	COG0518	GMP synthase (glutamine-hydrolyzing) activity
EYC56_11135	COG0519	Catalyzes the synthesis of GMP from XMP
EYC56_11145	COG0464	growth
EYC56_11160	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
EYC56_11165	COG0583	DNA-binding transcription factor activity
EYC56_11195	COG0583	DNA-binding transcription factor activity
EYC56_11220	COG1914	H( )-stimulated, divalent metal cation uptake system
EYC56_11225	COG1321	iron dependent repressor
EYC56_11230	COG0590	tRNA wobble adenosine to inosine editing
EYC56_11240	COG0668	transmembrane transport
EYC56_11250	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
EYC56_11265	COG1028	Short-chain dehydrogenase reductase Sdr
EYC56_11270	COG1183	phosphatidylcholine synthase activity
EYC56_11280	COG3243	poly(R)-hydroxyalkanoic acid synthase
EYC56_11295	COG0723	plastoquinol--plastocyanin reductase activity
EYC56_11295	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
EYC56_11305	COG2183	response to ionizing radiation
EYC56_11325	COG2205	protein histidine kinase activity
EYC56_11325	COG0784	Response regulator, receiver
EYC56_11415	COG3039	Transposase
EYC56_11440	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
EYC56_11475	COG1530	ribonuclease E activity
EYC56_11505	COG2154	pterin-4-alpha-carbinolamine dehydratase
EYC56_11530	COG3501	Rhs element vgr protein
EYC56_11555	COG3501	Rhs element vgr protein
EYC56_11670	COG3501	Rhs element vgr protein
EYC56_11705	COG0631	protein serine/threonine phosphatase activity
EYC56_11740	COG1858	cytochrome C peroxidase
EYC56_11785	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
EYC56_11790	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
EYC56_11935	COG3501	Rhs element vgr protein
EYC56_11975	COG4566	intracellular signal transduction
EYC56_11985	COG5001	Diguanylate cyclase
EYC56_12005	COG3685	Protein conserved in bacteria
EYC56_12045	COG1648	precorrin-2 dehydrogenase activity
EYC56_12045	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
EYC56_12070	COG0746	molybdenum cofactor guanylyltransferase activity
EYC56_12085	COG0708	Exodeoxyribonuclease III
EYC56_12095	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
EYC56_12105	COG0303	'Molybdopterin
EYC56_12110	COG1160	GTP binding
EYC56_12115	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
EYC56_12140	COG0105	UTP biosynthetic process
EYC56_12150	COG1250	3-hydroxyacyl-CoA dehydrogenase
EYC56_12150	COG1024	Enoyl-CoA hydratase
EYC56_12155	COG0183	Belongs to the thiolase family
EYC56_12160	COG0038	chloride channel
EYC56_12180	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
EYC56_12205	COG1674	ftsk spoiiie
EYC56_12210	COG0492	ferredoxin-NADP+ reductase activity
EYC56_12230	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
EYC56_12235	COG0542	response to heat
EYC56_12240	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
EYC56_12250	COG0482	sulfurtransferase activity
EYC56_12280	COG4585	Histidine kinase
EYC56_12290	COG5002	protein histidine kinase activity
EYC56_12310	COG0784	Response regulator, receiver
EYC56_12310	COG0835	chemotaxis
EYC56_12320	COG1558	bacterial-type flagellum-dependent cell motility
EYC56_12325	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
EYC56_12330	COG1749	Flagellar hook protein flgE
EYC56_12335	COG4787	bacterial-type flagellum-dependent cell motility
EYC56_12340	COG4786	Flagellar basal body rod
EYC56_12345	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
EYC56_12350	COG1706	bacterial-type flagellum-dependent cell motility
EYC56_12370	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
EYC56_12375	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
EYC56_12405	COG2201	protein-glutamate methylesterase activity
EYC56_12410	COG2204	response regulator
EYC56_12425	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
EYC56_12435	COG1028	Short-chain dehydrogenase reductase Sdr
EYC56_12465	COG2826	transposase and inactivated derivatives, IS30 family
EYC56_12485	COG1677	Flagellar hook-basal body complex protein FliE
EYC56_12535	COG3190	flagellar
EYC56_12550	COG1987	bacterial-type flagellum assembly
EYC56_12555	COG1684	flagellar biosynthetic protein fliR
EYC56_12560	COG5001	Diguanylate cyclase
EYC56_12560	COG3300	MHYT domain
EYC56_12565	COG3300	MHYT domain
EYC56_12565	COG5001	Diguanylate cyclase
EYC56_12590	COG0455	bacterial-type flagellum organization
EYC56_12610	COG0643	Histidine kinase
EYC56_12610	COG2198	Histidine kinase
EYC56_12640	COG2801	Transposase and inactivated derivatives
EYC56_12680	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
EYC56_12705	COG0811	peptide transport
EYC56_12730	COG4591	ABC-type transport system involved in lipoprotein release permease component
EYC56_12745	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
EYC56_12760	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
EYC56_12775	COG0354	folic acid binding
EYC56_12790	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
EYC56_12800	COG0363	glucosamine-6-phosphate deaminase activity
EYC56_12805	COG0129	dihydroxy-acid dehydratase activity
EYC56_12810	COG0800	Aldolase
EYC56_12950	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
EYC56_12955	COG4774	siderophore transport
EYC56_12965	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
EYC56_12970	COG1360	Flagellar Motor Protein
EYC56_12975	COG1192	Involved in chromosome partitioning
EYC56_12980	COG0835	chemotaxis
EYC56_12990	COG0745	RESPONSE REGULATOR receiver
EYC56_13000	COG0840	transmembrane signaling receptor activity
EYC56_13025	COG0840	transmembrane signaling receptor activity
EYC56_13040	COG0840	transmembrane signaling receptor activity
EYC56_13050	COG0840	transmembrane signaling receptor activity
EYC56_13060	COG0840	transmembrane signaling receptor activity
EYC56_13070	COG0840	transmembrane signaling receptor activity
EYC56_13075	COG0840	transmembrane signaling receptor activity
EYC56_13080	COG0840	transmembrane signaling receptor activity
EYC56_13085	COG0840	transmembrane signaling receptor activity
EYC56_13090	COG0840	transmembrane signaling receptor activity
EYC56_13110	COG0835	chemotaxis
EYC56_13120	COG0840	transmembrane signaling receptor activity
EYC56_13155	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
EYC56_13185	COG0318	PFAM AMP-dependent synthetase and ligase
EYC56_13190	COG1024	Enoyl-CoA hydratase
EYC56_13195	COG2198	Histidine kinase
EYC56_13195	COG0784	Response regulator, receiver
EYC56_13195	COG2205	protein histidine kinase activity
EYC56_13220	COG3279	Response regulator of the LytR AlgR family
EYC56_13235	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
EYC56_13245	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
EYC56_13250	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
EYC56_13260	COG0505	Belongs to the CarA family
EYC56_13265	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
EYC56_13270	COG2258	MOSC domain
EYC56_13275	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
EYC56_13325	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
EYC56_13350	COG0277	FAD linked oxidase domain protein
EYC56_13355	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
EYC56_13365	COG0531	amino acid
EYC56_13370	COG0531	amino acid
EYC56_13375	COG0235	Class ii aldolase
EYC56_13400	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
EYC56_13400	COG0140	phosphoribosyl-ATP diphosphatase activity
EYC56_13450	COG0124	histidyl-tRNA synthetase
EYC56_13470	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
EYC56_13525	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
EYC56_13525	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
EYC56_13570	COG2814	Major facilitator Superfamily
EYC56_13650	COG1012	belongs to the aldehyde dehydrogenase family
EYC56_13670	COG0812	UDP-N-acetylmuramate dehydrogenase activity
EYC56_13675	COG0697	spore germination
EYC56_13685	COG1794	racemase activity, acting on amino acids and derivatives
EYC56_13705	COG0671	phosphoesterase, PA-phosphatase related
EYC56_13720	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
EYC56_13730	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
EYC56_13740	COG5001	Diguanylate cyclase
EYC56_13740	COG4251	negative regulation of phosphorylation
EYC56_13740	COG3706	GGDEF domain
EYC56_13740	COG2203	Gaf domain
EYC56_13760	COG1472	Belongs to the glycosyl hydrolase 3 family
EYC56_13790	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
EYC56_13810	COG0617	tRNA 3'-terminal CCA addition
EYC56_13825	COG0860	N-Acetylmuramoyl-L-alanine amidase
EYC56_13845	COG0477	Major facilitator Superfamily
EYC56_13855	COG1070	Carbohydrate kinase
EYC56_13870	COG2826	transposase and inactivated derivatives, IS30 family
EYC56_13890	COG0800	Aldolase
EYC56_13905	COG3734	2-keto-3-deoxy-galactonokinase
EYC56_13910	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
EYC56_13920	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
EYC56_13935	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
EYC56_13940	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
EYC56_13950	COG0352	thiamine-phosphate diphosphorylase activity
EYC56_13950	COG0351	phosphomethylpyrimidine kinase
EYC56_13975	COG0583	DNA-binding transcription factor activity
EYC56_13980	COG1741	Belongs to the pirin family
EYC56_14010	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
EYC56_14040	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
EYC56_14050	COG2137	regulation of response to DNA damage stimulus
EYC56_14075	COG1546	Belongs to the CinA family
EYC56_14080	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
EYC56_14085	COG1923	regulation of RNA biosynthetic process
EYC56_14095	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
EYC56_14100	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
EYC56_14110	COG1534	Rna-binding protein
EYC56_14125	COG1238	metal cluster binding
EYC56_14140	COG2840	Smr protein MutS2
EYC56_14170	COG0148	phosphopyruvate hydratase activity
EYC56_14230	COG1253	flavin adenine dinucleotide binding
EYC56_14245	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
EYC56_14265	COG2271	Major facilitator Superfamily
EYC56_14275	COG1132	(ABC) transporter
EYC56_14280	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
EYC56_14295	COG0438	transferase activity, transferring glycosyl groups
EYC56_14305	COG2264	protein methyltransferase activity
EYC56_14335	COG2244	polysaccharide biosynthetic process
EYC56_14385	COG1595	DNA-templated transcription, initiation
EYC56_14400	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
EYC56_14420	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
EYC56_14435	COG0784	Response regulator, receiver
EYC56_14435	COG4191	Histidine kinase
EYC56_14440	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
EYC56_14445	COG0784	Response regulator, receiver
EYC56_14445	COG4191	Histidine kinase
EYC56_14460	COG0840	transmembrane signaling receptor activity
EYC56_14530	COG0583	DNA-binding transcription factor activity
EYC56_14545	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
EYC56_14570	COG0077	Prephenate dehydratase
EYC56_14570	COG1605	Chorismate mutase
EYC56_14575	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
EYC56_14580	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
EYC56_14630	COG2986	histidine ammonia-lyase
EYC56_14640	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
EYC56_14695	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
EYC56_14700	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
EYC56_14710	COG3115	cell septum assembly
EYC56_14735	COG0316	Belongs to the HesB IscA family
EYC56_14770	COG0288	reversible hydration of carbon dioxide
EYC56_14785	COG3844	kynureninase activity
EYC56_14795	COG2925	Exonuclease
EYC56_14805	COG0667	Aldo Keto reductase
EYC56_14820	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
EYC56_14880	COG0494	nUDIX hydrolase
EYC56_14890	COG1024	Enoyl-CoA hydratase
EYC56_14900	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
EYC56_14905	COG0659	secondary active sulfate transmembrane transporter activity
EYC56_14930	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
EYC56_14935	COG0573	inorganic phosphate transmembrane transporter activity
EYC56_14950	COG0704	Plays a role in the regulation of phosphate uptake
EYC56_14960	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
EYC56_14970	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
EYC56_14985	COG0557	exoribonuclease II activity
EYC56_15015	COG1960	acyl-CoA dehydrogenase activity
EYC56_15025	COG1410	methionine synthase
EYC56_15025	COG0646	methionine synthase
EYC56_15040	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
EYC56_15080	COG0386	Belongs to the glutathione peroxidase family
EYC56_15090	COG1725	Transcriptional regulator
EYC56_15095	COG1131	(ABC) transporter
EYC56_15155	COG2850	peptidyl-arginine hydroxylation
EYC56_15190	COG1132	(ABC) transporter
EYC56_15200	COG0583	DNA-binding transcription factor activity
EYC56_15235	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
EYC56_15250	COG0443	Heat shock 70 kDa protein
EYC56_15265	COG0497	DNA recombination
EYC56_15275	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
EYC56_15285	COG2914	Belongs to the UPF0125 (RnfH) family
EYC56_15295	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
EYC56_15345	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
EYC56_15350	COG0174	glutamine synthetase
EYC56_15375	COG3706	GGDEF domain
EYC56_15385	COG3706	GGDEF domain
EYC56_15395	COG1028	Short-chain dehydrogenase reductase Sdr
EYC56_15415	COG0415	Belongs to the DNA photolyase family
EYC56_15420	COG0305	Participates in initiation and elongation during chromosome replication
EYC56_15430	COG0367	asparagine synthase
EYC56_15445	COG1960	acyl-CoA dehydrogenase activity
EYC56_15460	COG0084	hydrolase, TatD family'
EYC56_15465	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
EYC56_15505	COG0840	transmembrane signaling receptor activity
EYC56_15515	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
EYC56_15565	COG0386	Belongs to the glutathione peroxidase family
EYC56_15575	COG0339	signal peptide processing
EYC56_15670	COG2814	Major facilitator Superfamily
EYC56_15675	COG1566	PFAM secretion protein HlyD family protein
EYC56_15690	COG2207	Transcriptional regulator
EYC56_15720	COG4774	siderophore transport
EYC56_15730	COG0367	asparagine synthase
EYC56_15735	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
EYC56_15745	COG1393	Belongs to the ArsC family
EYC56_15765	COG0024	Methionine aminopeptidase
EYC56_15810	COG0745	RESPONSE REGULATOR receiver
EYC56_15810	COG3706	GGDEF domain
EYC56_15830	COG0575	Belongs to the CDS family
EYC56_15835	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
EYC56_15840	COG0750	zinc metalloprotease
EYC56_15860	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
EYC56_15890	COG0825	malonyl-CoA metabolic process
EYC56_15965	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
EYC56_15980	COG2040	homocysteine
EYC56_15985	COG0833	amino acid
EYC56_15990	COG0346	lactoylglutathione lyase activity
EYC56_16010	COG2878	Part of a membrane complex involved in electron transport
EYC56_16030	COG1595	DNA-templated transcription, initiation
EYC56_16055	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
EYC56_16070	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
EYC56_16075	COG0251	oxidation-reduction process
EYC56_16090	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
EYC56_16090	COG0392	lysyltransferase activity
EYC56_16135	COG2814	Major facilitator Superfamily
EYC56_16140	COG1902	pentaerythritol trinitrate reductase activity
EYC56_16155	COG2824	Alkylphosphonate utilization operon protein PhnA
EYC56_16165	COG1047	Peptidyl-prolyl cis-trans
EYC56_16200	COG3039	Transposase
EYC56_16215	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
EYC56_16230	COG1451	nucleotide metabolic process
EYC56_16250	COG0183	Belongs to the thiolase family
EYC56_16265	COG3706	GGDEF domain
EYC56_16265	COG0745	RESPONSE REGULATOR receiver
EYC56_16285	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
EYC56_16285	COG1793	dna ligase
EYC56_16295	COG1793	dna ligase
EYC56_16300	COG1201	RNA secondary structure unwinding
EYC56_16315	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
EYC56_16320	COG1278	Cold shock
EYC56_16325	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
EYC56_16340	COG3046	protein related to deoxyribodipyrimidine photolyase
EYC56_16345	COG3380	Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P) . May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers
EYC56_16350	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
EYC56_16400	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
EYC56_16415	COG1024	Enoyl-CoA hydratase
EYC56_16415	COG1250	3-hydroxyacyl-CoA dehydrogenase
EYC56_16435	COG1024	Enoyl-CoA hydratase
EYC56_16440	COG1960	acyl-CoA dehydrogenase activity
EYC56_16505	COG0784	Response regulator, receiver
EYC56_16505	COG5002	protein histidine kinase activity
EYC56_16510	COG2205	protein histidine kinase activity
EYC56_16510	COG2198	Histidine kinase
EYC56_16510	COG0784	Response regulator, receiver
EYC56_16515	COG2353	YceI-like domain
EYC56_16540	COG1760	l-serine dehydratase
EYC56_16545	COG0460	homoserine dehydrogenase
EYC56_16545	COG0527	aspartate kinase activity
EYC56_16550	COG0626	cystathionine gamma-synthase activity
EYC56_16555	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
EYC56_16560	COG0739	heme binding
EYC56_16570	COG1272	protein, Hemolysin III
EYC56_16575	COG2982	Protein involved in outer membrane biogenesis
EYC56_16580	COG0516	GMP reductase activity
EYC56_16580	COG0517	IMP dehydrogenase activity
EYC56_16585	COG0463	Glycosyl transferase, family 2
EYC56_16595	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
EYC56_16605	COG4771	TonB-dependent receptor
EYC56_16610	COG1309	transcriptional regulator
EYC56_16620	COG1960	acyl-CoA dehydrogenase activity
EYC56_16670	COG0330	HflC and HflK could
EYC56_16680	COG1742	UPF0060 membrane protein
EYC56_16685	COG3956	TIGRFAM MazG family protein
EYC56_16695	COG0494	nUDIX hydrolase
EYC56_16705	COG1385	rRNA (uridine-N3-)-methyltransferase activity
EYC56_16710	COG0837	glucose binding
EYC56_16725	COG3858	chitin binding
EYC56_16725	COG1388	LysM domain
EYC56_16745	COG1472	Belongs to the glycosyl hydrolase 3 family
EYC56_16780	COG3039	Transposase
EYC56_16790	COG3537	Alpha-1,2-mannosidase
EYC56_16840	COG3142	Participates in the control of copper homeostasis
EYC56_16845	COG1446	asparaginase
EYC56_16885	COG0840	transmembrane signaling receptor activity
EYC56_16890	COG0835	chemotaxis
EYC56_16905	COG0189	ligase activity
EYC56_16925	COG1199	ATP-dependent helicase activity
EYC56_16935	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
EYC56_16950	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
EYC56_17005	COG0783	Belongs to the Dps family
EYC56_17015	COG0514	ATP-dependent DNA helicase (RecQ)
EYC56_17095	COG0602	queuosine metabolic process
EYC56_17105	COG2885	chlorophyll binding
EYC56_17110	COG0823	Involved in the tonB-independent uptake of proteins
EYC56_17130	COG0824	Thioesterase
EYC56_17150	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
EYC56_17155	COG0217	transcriptional regulatory protein
EYC56_17175	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
EYC56_17190	COG0477	Major facilitator Superfamily
EYC56_17205	COG2755	lipolytic protein G-D-S-L family
EYC56_17205	COG0657	acetylesterase activity
EYC56_17225	COG0488	(ABC) transporter
EYC56_17255	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
EYC56_17255	COG4651	solute:proton antiporter activity
EYC56_17270	COG4772	TonB-dependent receptor
EYC56_17280	COG4264	IucA IucC family
EYC56_17285	COG2814	Major facilitator Superfamily
EYC56_17295	COG0019	diaminopimelate decarboxylase activity
EYC56_17315	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
EYC56_17350	COG4206	TonB-dependent receptor
EYC56_17365	COG4248	protein with protein kinase and helix-hairpin-helix DNA-binding domains
EYC56_17370	COG0631	protein serine/threonine phosphatase activity
EYC56_17375	COG4245	von Willebrand factor, type A
EYC56_17400	COG0542	response to heat
EYC56_17425	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
EYC56_17435	COG0534	Mate efflux family protein
EYC56_17485	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
EYC56_17495	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
EYC56_17535	COG2172	sigma factor antagonist activity
EYC56_17540	COG1366	Belongs to the anti-sigma-factor antagonist family
EYC56_17545	COG1366	Belongs to the anti-sigma-factor antagonist family
EYC56_17555	COG0326	Molecular chaperone. Has ATPase activity
EYC56_17560	COG2207	Transcriptional regulator
EYC56_17595	COG3039	Transposase
EYC56_17600	COG3209	COG3209 Rhs family protein
EYC56_17620	COG3209	COG3209 Rhs family protein
EYC56_17650	COG3209	COG3209 Rhs family protein
EYC56_17670	COG3209	COG3209 Rhs family protein
EYC56_17680	COG3501	Rhs element vgr protein
EYC56_17690	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
EYC56_17695	COG1845	cytochrome c oxidase, subunit III
EYC56_17700	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
EYC56_17720	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
EYC56_17730	COG0196	riboflavin kinase activity
EYC56_17735	COG0728	peptidoglycan biosynthetic process
EYC56_17740	COG0268	Binds directly to 16S ribosomal RNA
EYC56_17760	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
EYC56_17765	COG0824	Thioesterase
EYC56_17780	COG1946	Acyl-CoA thioesterase
EYC56_17790	COG1595	DNA-templated transcription, initiation
EYC56_17845	COG1877	trehalose-phosphatase activity
EYC56_17850	COG3387	PFAM Glycoside hydrolase 15-related
EYC56_17865	COG0840	transmembrane signaling receptor activity
EYC56_17870	COG3011	Protein conserved in bacteria
EYC56_17885	COG0564	pseudouridine synthase activity
EYC56_17890	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
EYC56_17895	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
EYC56_17895	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
EYC56_17910	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
EYC56_17950	COG1459	type II secretion system
EYC56_17955	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
EYC56_17960	COG0237	dephospho-CoA kinase activity
EYC56_17975	COG2826	transposase and inactivated derivatives, IS30 family
EYC56_18000	COG3039	Transposase
EYC56_18025	COG0745	RESPONSE REGULATOR receiver
EYC56_18030	COG2205	protein histidine kinase activity
EYC56_18055	COG2826	transposase and inactivated derivatives, IS30 family
EYC56_18135	COG3273	potassium ion transport
EYC56_18135	COG0471	metal ion transport
EYC56_18170	COG1970	mechanosensitive ion channel activity
EYC56_18185	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
EYC56_18205	COG0308	aminopeptidase N
EYC56_18210	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
EYC56_18220	COG0529	Catalyzes the synthesis of activated sulfate
EYC56_18220	COG2895	sulfate adenylyltransferase (ATP) activity
EYC56_18230	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
EYC56_18260	COG0784	Response regulator, receiver
EYC56_18260	COG2198	Histidine kinase
EYC56_18260	COG2205	protein histidine kinase activity
EYC56_18310	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
EYC56_18315	COG3588	fructose-bisphosphate aldolase
EYC56_18320	COG0469	pyruvate kinase activity
EYC56_18345	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
EYC56_18355	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
EYC56_18355	COG3453	Protein conserved in bacteria
EYC56_18360	COG0725	ABC transporter, periplasmic molybdate-binding protein
EYC56_18365	COG4149	molybdate abc transporter
EYC56_18370	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
EYC56_18390	COG0642	Histidine kinase
EYC56_18415	COG1022	Amp-dependent synthetase and ligase
EYC56_18445	COG1376	ErfK ybiS ycfS ynhG family protein
EYC56_18450	COG0739	heme binding
EYC56_18465	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
EYC56_18470	COG1301	dicarboxylic acid transport
EYC56_18490	COG2304	oxidoreductase activity
EYC56_18510	COG0714	Associated with various cellular activities
EYC56_18545	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
EYC56_18565	COG0254	rRNA binding
EYC56_18575	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
EYC56_18585	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
EYC56_18590	COG1758	RNA polymerase activity
EYC56_18605	COG1561	YicC-like family, N-terminal region
EYC56_18615	COG0346	lactoylglutathione lyase activity
EYC56_18625	COG0635	Involved in the biosynthesis of porphyrin-containing compound
EYC56_18655	COG0006	proline dipeptidase activity
EYC56_18680	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
EYC56_18700	COG2912	Transglutaminase-like superfamily
EYC56_18705	COG1773	rubredoxin
EYC56_18710	COG0352	thiamine-phosphate diphosphorylase activity
EYC56_18725	COG1396	sequence-specific DNA binding
EYC56_18825	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
EYC56_18830	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
EYC56_18840	COG1028	Short-chain dehydrogenase reductase Sdr
EYC56_18850	COG0671	phosphoesterase, PA-phosphatase related
EYC56_18860	COG3781	membrane
EYC56_18870	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
EYC56_18915	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
EYC56_18925	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
EYC56_19000	COG2226	methyltransferase
EYC56_19030	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
EYC56_19035	COG1538	Outer membrane efflux protein
EYC56_19040	COG1519	Transferase
EYC56_19045	COG1560	Kdo2-lipid A biosynthetic process
EYC56_19075	COG0280	phosphate acetyltransferase
EYC56_19075	COG0281	malic enzyme
EYC56_19095	COG4191	Histidine kinase
EYC56_19110	COG0583	DNA-binding transcription factor activity
EYC56_19130	COG2197	response regulator
EYC56_19135	COG1840	ABC-type Fe3 transport system, periplasmic component
EYC56_19140	COG0642	Histidine kinase
EYC56_19160	COG2851	Citrate transporter
EYC56_19165	COG1028	Short-chain dehydrogenase reductase Sdr
EYC56_19170	COG1609	Transcriptional regulator
EYC56_19180	COG2211	Major facilitator Superfamily
EYC56_19210	COG0436	Aminotransferase
EYC56_19230	COG0726	polysaccharide deacetylase
EYC56_19235	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
EYC56_19250	COG3039	Transposase
EYC56_19275	COG3964	amidohydrolase
EYC56_19280	COG0402	S-adenosylhomocysteine deaminase activity
EYC56_19320	COG0242	peptide deformylase activity
EYC56_19340	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
EYC56_19395	COG2188	Transcriptional regulator
EYC56_19405	COG1450	Type ii and iii secretion system protein
EYC56_19420	COG3166	PFAM Fimbrial assembly family protein
EYC56_19425	COG3156	type II secretion system protein K
EYC56_19430	COG4795	General secretion pathway protein
EYC56_19435	COG2165	general secretion pathway protein
EYC56_19440	COG4970	Tfp pilus assembly protein FimT
EYC56_19445	COG2165	general secretion pathway protein
EYC56_19450	COG1459	type II secretion system
EYC56_19460	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
EYC56_19465	COG1404	Belongs to the peptidase S8 family
EYC56_19470	COG5295	Hep Hag repeat protein
EYC56_19480	COG0047	phosphoribosylformylglycinamidine synthase activity
EYC56_19480	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
EYC56_19490	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
EYC56_19495	COG4974	Belongs to the 'phage' integrase family
EYC56_19510	COG0795	lipopolysaccharide-transporting ATPase activity
EYC56_19535	COG0525	valine-tRNA ligase activity
EYC56_19565	COG1183	phosphatidylcholine synthase activity
EYC56_19590	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
EYC56_19595	COG1127	ABC transporter
EYC56_19600	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
EYC56_19600	COG3218	ABC-type transport auxiliary lipoprotein component
EYC56_19635	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
EYC56_19640	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
EYC56_19640	COG0662	Cupin 2, conserved barrel domain protein
EYC56_19665	COG2086	electron transfer activity
EYC56_19680	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
EYC56_19680	COG0546	phosphoglycolate phosphatase activity
EYC56_19685	COG0277	FAD linked oxidase domain protein
EYC56_19700	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
EYC56_19705	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
EYC56_19735	COG1216	Glycosyl transferase, family 2
EYC56_19735	COG0438	transferase activity, transferring glycosyl groups
EYC56_19755	COG0626	cystathionine gamma-synthase activity
EYC56_19785	COG0625	glutathione transferase activity
EYC56_19800	COG0513	Belongs to the DEAD box helicase family
EYC56_19810	COG0720	synthase
EYC56_19825	COG1956	GAF domain-containing protein
EYC56_19835	COG0546	phosphoglycolate phosphatase activity
EYC56_19865	COG0339	signal peptide processing
EYC56_19910	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
EYC56_20040	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
EYC56_20050	COG0356	it plays a direct role in the translocation of protons across the membrane
EYC56_20070	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
EYC56_20080	COG0508	dehydrogenase complex catalyzes the overall conversion of
EYC56_20120	COG2011	ABC-type metal ion transport system permease component
EYC56_20130	COG0697	spore germination
EYC56_20165	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
EYC56_20170	COG1187	pseudouridine synthase activity
EYC56_20175	COG2813	Specifically methylates the guanine in position
EYC56_20205	COG2202	Pas domain
EYC56_20205	COG2205	protein histidine kinase activity
EYC56_20230	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
EYC56_20235	COG1522	sequence-specific DNA binding
EYC56_20280	COG0745	RESPONSE REGULATOR receiver
EYC56_20295	COG1404	Belongs to the peptidase S8 family
EYC56_20310	COG0842	Transport permease protein
EYC56_20315	COG1131	(ABC) transporter
EYC56_20320	COG0025	NhaP-type Na H and K H
EYC56_20330	COG3039	Transposase
EYC56_20335	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
EYC56_20345	COG1573	uracil-dna glycosylase
EYC56_20355	COG3384	dioxygenase
EYC56_20370	COG0667	Aldo Keto reductase
EYC56_20380	COG3590	peptidase
EYC56_20400	COG0531	amino acid
EYC56_20415	COG2972	Histidine kinase
EYC56_20435	COG3685	Protein conserved in bacteria
EYC56_20440	COG3546	catalase activity
EYC56_20470	COG2204	response regulator
EYC56_20485	COG1271	oxidase subunit
EYC56_20490	COG1294	oxidase, subunit
EYC56_20510	COG1063	alcohol dehydrogenase
EYC56_20580	COG0251	oxidation-reduction process
EYC56_20595	COG0583	DNA-binding transcription factor activity
EYC56_20600	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
EYC56_20635	COG0038	chloride channel
EYC56_20645	COG0024	Methionine aminopeptidase
EYC56_20665	COG1191	sigma factor activity
EYC56_20680	COG4974	Belongs to the 'phage' integrase family
EYC56_20715	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
EYC56_20725	COG1560	Kdo2-lipid A biosynthetic process
EYC56_20775	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
EYC56_20775	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
EYC56_20785	COG0242	peptide deformylase activity
EYC56_20790	COG1652	LysM domain
EYC56_20795	COG0758	DNA mediated transformation
EYC56_20815	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
EYC56_20815	COG1754	DNA topoisomerase type I activity
EYC56_20835	COG1028	Short-chain dehydrogenase reductase Sdr
EYC56_20845	COG0616	signal peptide processing
EYC56_20850	COG0534	Mate efflux family protein
EYC56_20870	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
EYC56_20875	COG1324	tolerance protein
EYC56_20900	COG0511	ligase activity, forming carbon-carbon bonds
EYC56_20910	COG0439	Biotin carboxylase
EYC56_20965	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
EYC56_21000	COG0138	bifunctional purine biosynthesis protein purh
EYC56_21010	COG0151	Belongs to the GarS family
EYC56_21020	COG1289	transmembrane transporter activity
EYC56_21025	COG2814	Major facilitator Superfamily
EYC56_21035	COG2814	Major facilitator Superfamily
EYC56_21055	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
EYC56_21135	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
EYC56_21155	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
EYC56_21165	COG0134	indole-3-glycerol-phosphate synthase activity
EYC56_21210	COG2336	PFAM SpoVT AbrB
EYC56_21275	COG3501	Rhs element vgr protein
EYC56_21355	COG1192	Involved in chromosome partitioning
EYC56_21400	COG0270	DNA (cytosine-5-)-methyltransferase activity
EYC56_21420	COG2831	hemolysin activation secretion protein
EYC56_21580	COG1518	maintenance of DNA repeat elements
EYC56_21585	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
EYC56_21590	COG3039	Transposase
EYC56_21665	COG2003	Belongs to the UPF0758 family
EYC56_21690	COG0582	viral genome integration into host DNA
EYC56_21715	COG0456	acetyltransferase
EYC56_21725	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
EYC56_21760	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
EYC56_21760	COG2111	Na H antiporter
EYC56_21765	COG1006	Multisubunit Na H antiporter MnhC subunit
EYC56_21770	COG0651	ATP synthesis coupled electron transport
EYC56_21780	COG2212	antiporter activity
EYC56_21785	COG1320	monovalent cation:proton antiporter activity
EYC56_21815	COG3104	oligopeptide transport
EYC56_21830	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
EYC56_21845	COG0508	dehydrogenase complex catalyzes the overall conversion of
EYC56_21855	COG2826	transposase and inactivated derivatives, IS30 family
EYC56_21865	COG3039	Transposase
EYC56_21905	COG0606	chelatase, subunit chli
EYC56_21925	COG4943	cyclic-guanylate-specific phosphodiesterase activity
EYC56_21975	COG1090	epimerase
EYC56_21995	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
EYC56_22030	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
EYC56_22040	COG1595	DNA-templated transcription, initiation
EYC56_22045	COG0753	catalase activity
EYC56_22070	COG0697	spore germination
EYC56_22095	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
EYC56_22100	COG0180	Tryptophanyl-tRNA synthetase
EYC56_22105	COG3237	CsbD-like
EYC56_22160	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
EYC56_22160	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
EYC56_22170	COG3228	Belongs to the MtfA family
EYC56_22185	COG2205	protein histidine kinase activity
EYC56_22190	COG0745	RESPONSE REGULATOR receiver
EYC56_22200	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
EYC56_22230	COG1566	PFAM secretion protein HlyD family protein
EYC56_22355	COG0625	glutathione transferase activity
EYC56_22395	COG4555	ABC transporter
EYC56_22405	COG1476	TRANSCRIPTIONal
EYC56_22425	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
EYC56_22430	COG1131	(ABC) transporter
EYC56_22435	COG0842	Transport permease protein
EYC56_22445	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
EYC56_22520	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
EYC56_22540	COG2951	lytic endotransglycosylase activity
EYC56_22555	COG3039	Transposase
EYC56_22615	COG1166	arginine decarboxylase activity
EYC56_22645	COG0513	Belongs to the DEAD box helicase family
EYC56_22675	COG1028	Short-chain dehydrogenase reductase Sdr
EYC56_22760	COG5444	nuclease activity
EYC56_22885	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
EYC56_22945	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
EYC56_22950	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
EYC56_22995	COG0183	Belongs to the thiolase family
EYC56_23015	COG2032	superoxide dismutase activity
EYC56_23020	COG2032	superoxide dismutase activity
EYC56_23030	COG2204	response regulator
EYC56_23035	COG3852	Histidine kinase
EYC56_23040	COG0004	ammonium transporteR
EYC56_23045	COG0347	Belongs to the P(II) protein family
EYC56_23050	COG0174	glutamine synthetase
EYC56_23105	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
EYC56_23115	COG2062	phosphohistidine phosphatase, SixA
EYC56_23120	COG0489	protein tyrosine kinase activity
EYC56_23140	COG1396	sequence-specific DNA binding
EYC56_23145	COG3550	peptidyl-serine autophosphorylation
EYC56_23150	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
EYC56_23155	COG1262	PFAM Formylglycine-generating sulfatase enzyme
EYC56_23170	COG1125	glycine betaine transport
EYC56_23170	COG0517	IMP dehydrogenase activity
EYC56_23185	COG1119	ATPase activity
EYC56_23195	COG1473	amidohydrolase
EYC56_23200	COG1752	Esterase of the alpha-beta hydrolase superfamily
EYC56_23205	COG4773	Receptor
EYC56_23210	COG1522	sequence-specific DNA binding
EYC56_23215	COG3186	Phenylalanine-4-hydroxylase
EYC56_23235	COG1609	Transcriptional regulator
EYC56_23275	COG2826	transposase and inactivated derivatives, IS30 family
EYC56_23355	COG2826	transposase and inactivated derivatives, IS30 family
EYC56_23425	COG0366	Alpha amylase catalytic
EYC56_23430	COG0366	Alpha amylase catalytic
EYC56_23440	COG2831	hemolysin activation secretion protein
EYC56_23495	COG3039	Transposase
EYC56_23510	COG3039	Transposase
EYC56_23530	COG3210	domain, Protein
EYC56_23565	COG3039	Transposase
EYC56_23610	COG3693	PFAM glycoside hydrolase, family 10
EYC56_23635	COG2211	Major facilitator Superfamily
EYC56_23680	COG2937	Belongs to the GPAT DAPAT family
EYC56_23720	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
EYC56_23740	COG0210	DNA helicase
EYC56_23755	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
EYC56_23795	COG3135	benzoate transporter
EYC56_23815	COG0676	glucose-6-phosphate 1-epimerase activity
EYC56_23830	COG0730	response to heat
EYC56_23860	COG0302	gtp cyclohydrolase
EYC56_23975	COG0477	Major facilitator Superfamily
EYC56_23990	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
EYC56_24015	COG2826	transposase and inactivated derivatives, IS30 family
EYC56_24070	COG0564	pseudouridine synthase activity
EYC56_24150	COG1074	ATP-dependent DNA helicase activity
EYC56_24155	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
EYC56_24175	COG3039	Transposase
EYC56_24180	COG3039	Transposase
EYC56_24190	COG1136	(ABC) transporter
EYC56_24205	COG1127	ABC transporter
EYC56_24210	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
EYC56_24215	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
EYC56_24230	COG2853	Lipoprotein
EYC56_24240	COG0386	Belongs to the glutathione peroxidase family
EYC56_24250	COG1322	Protein conserved in bacteria
EYC56_24265	COG0531	amino acid
EYC56_24290	COG2199	diguanylate cyclase activity
EYC56_24290	COG2203	Gaf domain
EYC56_24300	COG1929	Belongs to the glycerate kinase type-1 family
EYC56_24305	COG2271	Major facilitator Superfamily
EYC56_24320	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
EYC56_24330	COG0861	Integral membrane protein TerC family
EYC56_24340	COG0584	glycerophosphoryl diester phosphodiesterase
EYC56_24350	COG0671	phosphoesterase, PA-phosphatase related
EYC56_24355	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
EYC56_24360	COG0726	polysaccharide deacetylase
EYC56_24375	COG0230	Belongs to the bacterial ribosomal protein bL34 family