locus-tag	class	description
EYC55_00025	COG0187	DNA topoisomerase II activity
EYC55_00035	COG0501	Belongs to the peptidase M48B family
EYC55_00065	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
EYC55_00115	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
EYC55_00135	COG0793	Belongs to the peptidase S41A family
EYC55_00140	COG4942	peptidase
EYC55_00150	COG2234	aminopeptidase activity
EYC55_00160	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
EYC55_00175	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
EYC55_00185	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
EYC55_00195	COG1064	alcohol dehydrogenase
EYC55_00210	COG0493	'glutamate synthase
EYC55_00215	COG0069	glutamate synthase activity
EYC55_00215	COG0070	glutamate synthase
EYC55_00215	COG0067	glutamate synthase
EYC55_00275	COG1205	dead DEAH box helicase
EYC55_00275	COG1111	helicase
EYC55_00280	COG1272	protein, Hemolysin III
EYC55_00305	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
EYC55_00315	COG4772	TonB-dependent receptor
EYC55_00330	COG3039	Transposase
EYC55_00370	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
EYC55_00405	COG0477	Major facilitator Superfamily
EYC55_00415	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
EYC55_00460	COG3237	CsbD-like
EYC55_00565	COG0246	Mannitol dehydrogenase
EYC55_00570	COG1472	Belongs to the glycosyl hydrolase 3 family
EYC55_00580	COG4948	Mandelate Racemase Muconate Lactonizing
EYC55_00590	COG3661	Belongs to the glycosyl hydrolase 67 family
EYC55_00610	COG0037	tRNA processing
EYC55_00615	COG2974	May be involved in recombination
EYC55_00640	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
EYC55_00650	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
EYC55_00655	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
EYC55_00660	COG0805	protein transport
EYC55_00670	COG0518	GMP synthase (glutamine-hydrolyzing) activity
EYC55_00670	COG0519	Catalyzes the synthesis of GMP from XMP
EYC55_00685	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
EYC55_00690	COG0752	glycyl-tRNA synthetase alpha subunit
EYC55_00700	COG0457	Tetratricopeptide repeat
EYC55_00705	COG4771	TonB-dependent receptor
EYC55_00710	COG0729	surface antigen
EYC55_00715	COG2911	Protein conserved in bacteria
EYC55_00760	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
EYC55_00765	COG3265	gluconokinase activity
EYC55_00770	COG2211	Major facilitator Superfamily
EYC55_00775	COG3459	Glycosyltransferase 36 associated
EYC55_00785	COG2205	protein histidine kinase activity
EYC55_00795	COG1414	Transcriptional regulator
EYC55_00800	COG0738	Major facilitator superfamily
EYC55_00805	COG3254	rhamnose metabolic process
EYC55_00810	COG4948	Mandelate Racemase Muconate Lactonizing
EYC55_00820	COG0179	Fumarylacetoacetate (FAA) hydrolase
EYC55_00825	COG1028	Short-chain dehydrogenase reductase Sdr
EYC55_00845	COG3507	Belongs to the glycosyl hydrolase 43 family
EYC55_00880	COG3162	membrane
EYC55_00885	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
EYC55_00900	COG0708	Exodeoxyribonuclease III
EYC55_00915	COG2091	lysine biosynthetic process via aminoadipic acid
EYC55_00925	COG3540	Alkaline phosphatase
EYC55_00930	COG0357	Ribosomal RNA small subunit methyltransferase G
EYC55_00945	COG0227	Belongs to the bacterial ribosomal protein bL28 family
EYC55_00950	COG0267	Belongs to the bacterial ribosomal protein bL33 family
EYC55_00955	COG2159	amidohydrolase
EYC55_00970	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
EYC55_00975	COG0583	DNA-binding transcription factor activity
EYC55_00980	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
EYC55_01000	COG0210	DNA helicase
EYC55_01125	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
EYC55_01140	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
EYC55_01185	COG1028	Short-chain dehydrogenase reductase Sdr
EYC55_01200	COG0463	Glycosyl transferase, family 2
EYC55_01210	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
EYC55_01215	COG3100	YcgL domain-containing protein
EYC55_01230	COG3387	PFAM Glycoside hydrolase 15-related
EYC55_01235	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
EYC55_01265	COG2239	Acts as a magnesium transporter
EYC55_01275	COG0045	succinate-CoA ligase (ADP-forming) activity
EYC55_01275	COG1042	CoA-binding domain protein
EYC55_01275	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
EYC55_01290	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
EYC55_01300	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
EYC55_01370	COG2826	transposase and inactivated derivatives, IS30 family
EYC55_01385	COG1166	arginine decarboxylase activity
EYC55_01415	COG0513	Belongs to the DEAD box helicase family
EYC55_01445	COG1028	Short-chain dehydrogenase reductase Sdr
EYC55_01465	COG3039	Transposase
EYC55_01475	COG2951	lytic endotransglycosylase activity
EYC55_01495	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
EYC55_01575	COG1518	maintenance of DNA repeat elements
EYC55_01580	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
EYC55_01655	COG2003	Belongs to the UPF0758 family
EYC55_01680	COG0582	viral genome integration into host DNA
EYC55_01705	COG0456	acetyltransferase
EYC55_01715	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
EYC55_01750	COG3039	Transposase
EYC55_01780	COG2111	Na H antiporter
EYC55_01780	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
EYC55_01785	COG1006	Multisubunit Na H antiporter MnhC subunit
EYC55_01790	COG0651	ATP synthesis coupled electron transport
EYC55_01800	COG2212	antiporter activity
EYC55_01805	COG1320	monovalent cation:proton antiporter activity
EYC55_01835	COG3104	oligopeptide transport
EYC55_01850	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
EYC55_01865	COG0508	dehydrogenase complex catalyzes the overall conversion of
EYC55_01915	COG0606	chelatase, subunit chli
EYC55_01935	COG4943	cyclic-guanylate-specific phosphodiesterase activity
EYC55_01985	COG1090	epimerase
EYC55_02005	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
EYC55_02040	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
EYC55_02050	COG1595	DNA-templated transcription, initiation
EYC55_02080	COG0697	spore germination
EYC55_02105	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
EYC55_02110	COG0180	Tryptophanyl-tRNA synthetase
EYC55_02115	COG3237	CsbD-like
EYC55_02170	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
EYC55_02170	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
EYC55_02180	COG3228	Belongs to the MtfA family
EYC55_02195	COG2205	protein histidine kinase activity
EYC55_02200	COG0745	RESPONSE REGULATOR receiver
EYC55_02210	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
EYC55_02240	COG1566	PFAM secretion protein HlyD family protein
EYC55_02255	COG1199	ATP-dependent helicase activity
EYC55_02295	COG0583	DNA-binding transcription factor activity
EYC55_02345	COG0625	glutathione transferase activity
EYC55_02390	COG4555	ABC transporter
EYC55_02400	COG1476	TRANSCRIPTIONal
EYC55_02420	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
EYC55_02425	COG1131	(ABC) transporter
EYC55_02430	COG0842	Transport permease protein
EYC55_02440	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
EYC55_02470	COG3039	Transposase
EYC55_02605	COG2831	hemolysin activation secretion protein
EYC55_02670	COG0270	DNA (cytosine-5-)-methyltransferase activity
EYC55_02715	COG1192	Involved in chromosome partitioning
EYC55_02790	COG3501	Rhs element vgr protein
EYC55_02875	COG2336	PFAM SpoVT AbrB
EYC55_02915	COG0134	indole-3-glycerol-phosphate synthase activity
EYC55_02925	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
EYC55_02955	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
EYC55_03035	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
EYC55_03055	COG2814	Major facilitator Superfamily
EYC55_03065	COG2814	Major facilitator Superfamily
EYC55_03070	COG1289	transmembrane transporter activity
EYC55_03080	COG0151	Belongs to the GarS family
EYC55_03090	COG0138	bifunctional purine biosynthesis protein purh
EYC55_03125	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
EYC55_03175	COG0439	Biotin carboxylase
EYC55_03185	COG0511	ligase activity, forming carbon-carbon bonds
EYC55_03215	COG1324	tolerance protein
EYC55_03220	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
EYC55_03240	COG0534	Mate efflux family protein
EYC55_03245	COG0616	signal peptide processing
EYC55_03255	COG1028	Short-chain dehydrogenase reductase Sdr
EYC55_03275	COG1754	DNA topoisomerase type I activity
EYC55_03275	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
EYC55_03295	COG0758	DNA mediated transformation
EYC55_03300	COG1652	LysM domain
EYC55_03305	COG0242	peptide deformylase activity
EYC55_03315	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
EYC55_03315	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
EYC55_03365	COG1560	Kdo2-lipid A biosynthetic process
EYC55_03375	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
EYC55_03385	COG2826	transposase and inactivated derivatives, IS30 family
EYC55_03400	COG3039	Transposase
EYC55_03480	COG1063	alcohol dehydrogenase
EYC55_03500	COG1294	oxidase, subunit
EYC55_03505	COG1271	oxidase subunit
EYC55_03520	COG2204	response regulator
EYC55_03550	COG3546	catalase activity
EYC55_03555	COG3685	Protein conserved in bacteria
EYC55_03575	COG2972	Histidine kinase
EYC55_03595	COG0531	amino acid
EYC55_03615	COG3590	peptidase
EYC55_03630	COG0667	Aldo Keto reductase
EYC55_03645	COG3384	dioxygenase
EYC55_03655	COG1573	uracil-dna glycosylase
EYC55_03665	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
EYC55_03675	COG0025	NhaP-type Na H and K H
EYC55_03680	COG1131	(ABC) transporter
EYC55_03685	COG0842	Transport permease protein
EYC55_03725	COG0745	RESPONSE REGULATOR receiver
EYC55_03780	COG1522	sequence-specific DNA binding
EYC55_03785	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
EYC55_03810	COG2205	protein histidine kinase activity
EYC55_03810	COG2202	Pas domain
EYC55_03840	COG2813	Specifically methylates the guanine in position
EYC55_03845	COG1187	pseudouridine synthase activity
EYC55_03850	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
EYC55_03885	COG0697	spore germination
EYC55_03895	COG2011	ABC-type metal ion transport system permease component
EYC55_03935	COG0508	dehydrogenase complex catalyzes the overall conversion of
EYC55_03945	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
EYC55_03965	COG0356	it plays a direct role in the translocation of protons across the membrane
EYC55_03975	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
EYC55_04050	COG2826	transposase and inactivated derivatives, IS30 family
EYC55_04085	COG3501	Rhs element vgr protein
EYC55_04090	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
EYC55_04110	COG1136	(ABC) transporter
EYC55_04120	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
EYC55_04165	COG0339	signal peptide processing
EYC55_04195	COG0546	phosphoglycolate phosphatase activity
EYC55_04205	COG1956	GAF domain-containing protein
EYC55_04220	COG0720	synthase
EYC55_04230	COG0513	Belongs to the DEAD box helicase family
EYC55_04245	COG0625	glutathione transferase activity
EYC55_04280	COG0626	cystathionine gamma-synthase activity
EYC55_04300	COG0438	transferase activity, transferring glycosyl groups
EYC55_04300	COG1216	Glycosyl transferase, family 2
EYC55_04345	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
EYC55_04350	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
EYC55_04365	COG0277	FAD linked oxidase domain protein
EYC55_04370	COG0546	phosphoglycolate phosphatase activity
EYC55_04370	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
EYC55_04385	COG2086	electron transfer activity
EYC55_04410	COG0662	Cupin 2, conserved barrel domain protein
EYC55_04410	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
EYC55_04415	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
EYC55_04455	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
EYC55_04455	COG3218	ABC-type transport auxiliary lipoprotein component
EYC55_04460	COG1127	ABC transporter
EYC55_04465	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
EYC55_04490	COG1183	phosphatidylcholine synthase activity
EYC55_04520	COG0525	valine-tRNA ligase activity
EYC55_04545	COG0795	lipopolysaccharide-transporting ATPase activity
EYC55_04560	COG4974	Belongs to the 'phage' integrase family
EYC55_04565	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
EYC55_04575	COG0047	phosphoribosylformylglycinamidine synthase activity
EYC55_04575	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
EYC55_04585	COG5295	Hep Hag repeat protein
EYC55_04590	COG1404	Belongs to the peptidase S8 family
EYC55_04595	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
EYC55_04605	COG1459	type II secretion system
EYC55_04610	COG2165	general secretion pathway protein
EYC55_04615	COG4970	Tfp pilus assembly protein FimT
EYC55_04620	COG2165	general secretion pathway protein
EYC55_04625	COG4795	General secretion pathway protein
EYC55_04630	COG3156	type II secretion system protein K
EYC55_04635	COG3166	PFAM Fimbrial assembly family protein
EYC55_04650	COG1450	Type ii and iii secretion system protein
EYC55_04660	COG2188	Transcriptional regulator
EYC55_04715	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
EYC55_04735	COG0242	peptide deformylase activity
EYC55_04780	COG0402	S-adenosylhomocysteine deaminase activity
EYC55_04785	COG3964	amidohydrolase
EYC55_04805	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
EYC55_04810	COG0726	polysaccharide deacetylase
EYC55_04830	COG0436	Aminotransferase
EYC55_04860	COG2211	Major facilitator Superfamily
EYC55_04870	COG1609	Transcriptional regulator
EYC55_04875	COG1028	Short-chain dehydrogenase reductase Sdr
EYC55_04880	COG2851	Citrate transporter
EYC55_04900	COG0642	Histidine kinase
EYC55_04905	COG1840	ABC-type Fe3 transport system, periplasmic component
EYC55_04910	COG2197	response regulator
EYC55_04935	COG0583	DNA-binding transcription factor activity
EYC55_04950	COG4191	Histidine kinase
EYC55_04970	COG0281	malic enzyme
EYC55_04970	COG0280	phosphate acetyltransferase
EYC55_05000	COG1560	Kdo2-lipid A biosynthetic process
EYC55_05005	COG1519	Transferase
EYC55_05010	COG1538	Outer membrane efflux protein
EYC55_05015	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
EYC55_05045	COG2226	methyltransferase
EYC55_05090	COG3710	Transcriptional regulator
EYC55_05115	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
EYC55_05125	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
EYC55_05140	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
EYC55_05155	COG3039	Transposase
EYC55_05170	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
EYC55_05180	COG3781	membrane
EYC55_05190	COG0671	phosphoesterase, PA-phosphatase related
EYC55_05200	COG1028	Short-chain dehydrogenase reductase Sdr
EYC55_05215	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
EYC55_05220	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
EYC55_05280	COG0352	thiamine-phosphate diphosphorylase activity
EYC55_05285	COG1773	rubredoxin
EYC55_05290	COG2912	Transglutaminase-like superfamily
EYC55_05310	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
EYC55_05335	COG0006	proline dipeptidase activity
EYC55_05365	COG0635	Involved in the biosynthesis of porphyrin-containing compound
EYC55_05375	COG0346	lactoylglutathione lyase activity
EYC55_05385	COG1561	YicC-like family, N-terminal region
EYC55_05400	COG1758	RNA polymerase activity
EYC55_05405	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
EYC55_05415	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
EYC55_05425	COG0254	rRNA binding
EYC55_05445	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
EYC55_05480	COG0714	Associated with various cellular activities
EYC55_05500	COG2304	oxidoreductase activity
EYC55_05520	COG1301	dicarboxylic acid transport
EYC55_05525	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
EYC55_05545	COG0739	heme binding
EYC55_05550	COG1376	ErfK ybiS ycfS ynhG family protein
EYC55_05580	COG1022	Amp-dependent synthetase and ligase
EYC55_05605	COG0642	Histidine kinase
EYC55_05625	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
EYC55_05630	COG4149	molybdate abc transporter
EYC55_05635	COG0725	ABC transporter, periplasmic molybdate-binding protein
EYC55_05640	COG3453	Protein conserved in bacteria
EYC55_05640	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
EYC55_05650	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
EYC55_05675	COG0469	pyruvate kinase activity
EYC55_05685	COG3588	fructose-bisphosphate aldolase
EYC55_05690	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
EYC55_05735	COG2205	protein histidine kinase activity
EYC55_05735	COG2198	Histidine kinase
EYC55_05735	COG0784	Response regulator, receiver
EYC55_05765	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
EYC55_05775	COG2895	sulfate adenylyltransferase (ATP) activity
EYC55_05775	COG0529	Catalyzes the synthesis of activated sulfate
EYC55_05785	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
EYC55_05790	COG0308	aminopeptidase N
EYC55_05810	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
EYC55_05825	COG1970	mechanosensitive ion channel activity
EYC55_05850	COG0471	metal ion transport
EYC55_05850	COG3273	potassium ion transport
EYC55_05915	COG0189	ligase activity
EYC55_05925	COG0745	RESPONSE REGULATOR receiver
EYC55_05930	COG2205	protein histidine kinase activity
EYC55_05935	COG0237	dephospho-CoA kinase activity
EYC55_05940	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
EYC55_05955	COG2194	sulfuric ester hydrolase activity
EYC55_05995	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
EYC55_06010	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
EYC55_06010	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
EYC55_06015	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
EYC55_06020	COG0564	pseudouridine synthase activity
EYC55_06035	COG3011	Protein conserved in bacteria
EYC55_06040	COG0840	transmembrane signaling receptor activity
EYC55_06055	COG3387	PFAM Glycoside hydrolase 15-related
EYC55_06060	COG1877	trehalose-phosphatase activity
EYC55_06115	COG1595	DNA-templated transcription, initiation
EYC55_06125	COG1946	Acyl-CoA thioesterase
EYC55_06140	COG0824	Thioesterase
EYC55_06145	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
EYC55_06165	COG0268	Binds directly to 16S ribosomal RNA
EYC55_06170	COG0728	peptidoglycan biosynthetic process
EYC55_06175	COG0196	riboflavin kinase activity
EYC55_06185	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
EYC55_06205	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
EYC55_06210	COG1845	cytochrome c oxidase, subunit III
EYC55_06215	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
EYC55_06225	COG3501	Rhs element vgr protein
EYC55_06235	COG3209	COG3209 Rhs family protein
EYC55_06265	COG3209	COG3209 Rhs family protein
EYC55_06280	COG3209	COG3209 Rhs family protein
EYC55_06295	COG3209	COG3209 Rhs family protein
EYC55_06330	COG2207	Transcriptional regulator
EYC55_06335	COG0326	Molecular chaperone. Has ATPase activity
EYC55_06345	COG1366	Belongs to the anti-sigma-factor antagonist family
EYC55_06350	COG1366	Belongs to the anti-sigma-factor antagonist family
EYC55_06355	COG2172	sigma factor antagonist activity
EYC55_06395	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
EYC55_06405	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
EYC55_06455	COG0534	Mate efflux family protein
EYC55_06465	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
EYC55_06520	COG0542	response to heat
EYC55_06550	COG4206	TonB-dependent receptor
EYC55_06585	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
EYC55_06605	COG0019	diaminopimelate decarboxylase activity
EYC55_06615	COG2814	Major facilitator Superfamily
EYC55_06620	COG4264	IucA IucC family
EYC55_06630	COG4772	TonB-dependent receptor
EYC55_06645	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
EYC55_06645	COG4651	solute:proton antiporter activity
EYC55_06675	COG0488	(ABC) transporter
EYC55_06695	COG0657	acetylesterase activity
EYC55_06695	COG2755	lipolytic protein G-D-S-L family
EYC55_06710	COG0477	Major facilitator Superfamily
EYC55_06725	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
EYC55_06740	COG0217	transcriptional regulatory protein
EYC55_06745	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
EYC55_06765	COG0824	Thioesterase
EYC55_06785	COG0823	Involved in the tonB-independent uptake of proteins
EYC55_06790	COG2885	chlorophyll binding
EYC55_06800	COG0602	queuosine metabolic process
EYC55_06880	COG0514	ATP-dependent DNA helicase (RecQ)
EYC55_06890	COG0783	Belongs to the Dps family
EYC55_06895	COG1643	Atp-dependent helicase
EYC55_06945	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
EYC55_06960	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
EYC55_06970	COG1199	ATP-dependent helicase activity
EYC55_06990	COG0189	ligase activity
EYC55_07005	COG0835	chemotaxis
EYC55_07010	COG0840	transmembrane signaling receptor activity
EYC55_07050	COG1446	asparaginase
EYC55_07055	COG3142	Participates in the control of copper homeostasis
EYC55_07105	COG3537	Alpha-1,2-mannosidase
EYC55_07120	COG3039	Transposase
EYC55_07140	COG3039	Transposase
EYC55_07180	COG1472	Belongs to the glycosyl hydrolase 3 family
EYC55_07200	COG3858	chitin binding
EYC55_07200	COG1388	LysM domain
EYC55_07215	COG0837	glucose binding
EYC55_07220	COG1385	rRNA (uridine-N3-)-methyltransferase activity
EYC55_07230	COG0494	nUDIX hydrolase
EYC55_07240	COG3956	TIGRFAM MazG family protein
EYC55_07245	COG1742	UPF0060 membrane protein
EYC55_07255	COG0330	HflC and HflK could
EYC55_07265	COG2826	transposase and inactivated derivatives, IS30 family
EYC55_07315	COG1960	acyl-CoA dehydrogenase activity
EYC55_07325	COG1309	transcriptional regulator
EYC55_07330	COG4771	TonB-dependent receptor
EYC55_07340	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
EYC55_07350	COG0463	Glycosyl transferase, family 2
EYC55_07355	COG0517	IMP dehydrogenase activity
EYC55_07355	COG0516	GMP reductase activity
EYC55_07360	COG2982	Protein involved in outer membrane biogenesis
EYC55_07365	COG1272	protein, Hemolysin III
EYC55_07375	COG0739	heme binding
EYC55_07380	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
EYC55_07385	COG0626	cystathionine gamma-synthase activity
EYC55_07390	COG0527	aspartate kinase activity
EYC55_07390	COG0460	homoserine dehydrogenase
EYC55_07395	COG1760	l-serine dehydratase
EYC55_07420	COG2353	YceI-like domain
EYC55_07425	COG0784	Response regulator, receiver
EYC55_07425	COG2205	protein histidine kinase activity
EYC55_07425	COG2198	Histidine kinase
EYC55_07430	COG0784	Response regulator, receiver
EYC55_07430	COG5002	protein histidine kinase activity
EYC55_07495	COG1960	acyl-CoA dehydrogenase activity
EYC55_07500	COG1024	Enoyl-CoA hydratase
EYC55_07520	COG1024	Enoyl-CoA hydratase
EYC55_07520	COG1250	3-hydroxyacyl-CoA dehydrogenase
EYC55_07535	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
EYC55_07585	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
EYC55_07590	COG3380	Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P) . May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers
EYC55_07595	COG3046	protein related to deoxyribodipyrimidine photolyase
EYC55_07610	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
EYC55_07615	COG1278	Cold shock
EYC55_07620	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
EYC55_07635	COG1201	RNA secondary structure unwinding
EYC55_07640	COG1793	dna ligase
EYC55_07650	COG1793	dna ligase
EYC55_07650	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
EYC55_07665	COG0745	RESPONSE REGULATOR receiver
EYC55_07665	COG3706	GGDEF domain
EYC55_07680	COG0183	Belongs to the thiolase family
EYC55_07700	COG1451	nucleotide metabolic process
EYC55_07715	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
EYC55_07765	COG1047	Peptidyl-prolyl cis-trans
EYC55_07775	COG2824	Alkylphosphonate utilization operon protein PhnA
EYC55_07790	COG1902	pentaerythritol trinitrate reductase activity
EYC55_07795	COG2814	Major facilitator Superfamily
EYC55_07840	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
EYC55_07840	COG0392	lysyltransferase activity
EYC55_07855	COG0251	oxidation-reduction process
EYC55_07860	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
EYC55_07875	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
EYC55_07900	COG1595	DNA-templated transcription, initiation
EYC55_07920	COG2878	Part of a membrane complex involved in electron transport
EYC55_07940	COG0346	lactoylglutathione lyase activity
EYC55_07945	COG0833	amino acid
EYC55_07950	COG2040	homocysteine
EYC55_07965	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
EYC55_08040	COG0825	malonyl-CoA metabolic process
EYC55_08075	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
EYC55_08095	COG0750	zinc metalloprotease
EYC55_08100	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
EYC55_08105	COG0575	Belongs to the CDS family
EYC55_08125	COG0745	RESPONSE REGULATOR receiver
EYC55_08125	COG3706	GGDEF domain
EYC55_08170	COG0024	Methionine aminopeptidase
EYC55_08190	COG1393	Belongs to the ArsC family
EYC55_08200	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
EYC55_08205	COG0367	asparagine synthase
EYC55_08215	COG4774	siderophore transport
EYC55_08245	COG2207	Transcriptional regulator
EYC55_08260	COG1566	PFAM secretion protein HlyD family protein
EYC55_08265	COG2814	Major facilitator Superfamily
EYC55_08360	COG0339	signal peptide processing
EYC55_08370	COG0386	Belongs to the glutathione peroxidase family
EYC55_08420	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
EYC55_08435	COG0840	transmembrane signaling receptor activity
EYC55_08475	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
EYC55_08480	COG0084	hydrolase, TatD family'
EYC55_08495	COG1960	acyl-CoA dehydrogenase activity
EYC55_08510	COG0367	asparagine synthase
EYC55_08520	COG0305	Participates in initiation and elongation during chromosome replication
EYC55_08525	COG0415	Belongs to the DNA photolyase family
EYC55_08540	COG1028	Short-chain dehydrogenase reductase Sdr
EYC55_08550	COG3706	GGDEF domain
EYC55_08560	COG3706	GGDEF domain
EYC55_08590	COG0174	glutamine synthetase
EYC55_08595	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
EYC55_08600	COG1280	lysine exporter protein (LysE YggA)
EYC55_08605	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
EYC55_08695	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
EYC55_08705	COG2914	Belongs to the UPF0125 (RnfH) family
EYC55_08715	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
EYC55_08725	COG0497	DNA recombination
EYC55_08740	COG0443	Heat shock 70 kDa protein
EYC55_08755	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
EYC55_08785	COG0583	DNA-binding transcription factor activity
EYC55_08795	COG1132	(ABC) transporter
EYC55_08830	COG2850	peptidyl-arginine hydroxylation
EYC55_08890	COG1131	(ABC) transporter
EYC55_08895	COG1725	Transcriptional regulator
EYC55_08905	COG0386	Belongs to the glutathione peroxidase family
EYC55_08945	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
EYC55_08955	COG0646	methionine synthase
EYC55_08955	COG1410	methionine synthase
EYC55_08960	COG1410	methionine synthase
EYC55_08960	COG0646	methionine synthase
EYC55_08970	COG1960	acyl-CoA dehydrogenase activity
EYC55_09000	COG0557	exoribonuclease II activity
EYC55_09015	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
EYC55_09025	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
EYC55_09035	COG0704	Plays a role in the regulation of phosphate uptake
EYC55_09050	COG0573	inorganic phosphate transmembrane transporter activity
EYC55_09055	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
EYC55_09080	COG0659	secondary active sulfate transmembrane transporter activity
EYC55_09085	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
EYC55_09095	COG1024	Enoyl-CoA hydratase
EYC55_09105	COG0494	nUDIX hydrolase
EYC55_09160	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
EYC55_09175	COG0667	Aldo Keto reductase
EYC55_09185	COG2925	Exonuclease
EYC55_09195	COG3844	kynureninase activity
EYC55_09210	COG0288	reversible hydration of carbon dioxide
EYC55_09245	COG0316	Belongs to the HesB IscA family
EYC55_09270	COG3115	cell septum assembly
EYC55_09280	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
EYC55_09285	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
EYC55_09340	COG3039	Transposase
EYC55_09345	COG0326	Molecular chaperone. Has ATPase activity
EYC55_09350	COG0742	ribosomal rna small subunit methyltransferase
EYC55_09370	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
EYC55_09375	COG0405	Gamma-glutamyltransferase
EYC55_09435	COG1862	Preprotein translocase
EYC55_09445	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
EYC55_09495	COG3501	Rhs element vgr protein
EYC55_09520	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
EYC55_09520	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
EYC55_09525	COG1105	Belongs to the carbohydrate kinase PfkB family
EYC55_09530	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
EYC55_09530	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
EYC55_09535	COG1609	Transcriptional regulator
EYC55_09545	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
EYC55_09550	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
EYC55_09560	COG2902	Dehydrogenase
EYC55_09580	COG0477	Major facilitator Superfamily
EYC55_09600	COG2733	membrane
EYC55_09610	COG1121	(ABC) transporter
EYC55_09635	COG0243	molybdopterin cofactor binding
EYC55_09645	COG0477	Major facilitator Superfamily
EYC55_09650	COG3706	GGDEF domain
EYC55_09650	COG0745	RESPONSE REGULATOR receiver
EYC55_09655	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
EYC55_09660	COG0174	glutamine synthetase
EYC55_09665	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
EYC55_09690	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
EYC55_09710	COG3842	ATPase activity
EYC55_09720	COG1176	ABC-type spermidine putrescine transport system, permease component I
EYC55_09725	COG1177	transmembrane transport
EYC55_09740	COG1012	belongs to the aldehyde dehydrogenase family
EYC55_09755	COG4535	Mg2 and Co2 transporter CorC
EYC55_09775	COG1702	phosphate starvation-inducible protein PhoH
EYC55_09795	COG0741	lytic transglycosylase activity
EYC55_09805	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
EYC55_09810	COG2857	Cytochrome c1
EYC55_09815	COG0625	glutathione transferase activity
EYC55_09820	COG2969	positive regulation of protein catabolic process
EYC55_09850	COG0840	transmembrane signaling receptor activity
EYC55_09855	COG0835	chemotaxis
EYC55_09865	COG2801	Transposase and inactivated derivatives
EYC55_09965	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
EYC55_10035	COG1262	PFAM Formylglycine-generating sulfatase enzyme
EYC55_10055	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
EYC55_10060	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
EYC55_10060	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
EYC55_10065	COG0802	atpase or kinase
EYC55_10070	COG0860	N-Acetylmuramoyl-L-alanine amidase
EYC55_10100	COG1028	Short-chain dehydrogenase reductase Sdr
EYC55_10110	COG0501	Belongs to the peptidase M48B family
EYC55_10120	COG2081	HI0933 family
EYC55_10125	COG4681	YaeQ
EYC55_10140	COG0625	glutathione transferase activity
EYC55_10150	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
EYC55_10160	COG0513	Belongs to the DEAD box helicase family
EYC55_10200	COG0483	inositol monophosphate 1-phosphatase activity
EYC55_10215	COG3300	MHYT domain
EYC55_10215	COG5001	Diguanylate cyclase
EYC55_10220	COG1509	lysine 2,3-aminomutase activity
EYC55_10235	COG0402	S-adenosylhomocysteine deaminase activity
EYC55_10260	COG4677	pectinesterase activity
EYC55_10285	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
EYC55_10295	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
EYC55_10310	COG2166	iron-sulfur cluster assembly
EYC55_10325	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
EYC55_10330	COG0137	argininosuccinate synthase activity
EYC55_10335	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
EYC55_10340	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
EYC55_10405	COG1271	oxidase subunit
EYC55_10415	COG4988	ABC transporter
EYC55_10420	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
EYC55_10440	COG1278	Cold shock
EYC55_10490	COG4133	protoheme IX ABC transporter activity
EYC55_10495	COG0436	Aminotransferase
EYC55_10515	COG1187	pseudouridine synthase activity
EYC55_10520	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
EYC55_10525	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
EYC55_10530	COG2350	Protein conserved in bacteria
EYC55_10560	COG1175	transmembrane transport
EYC55_10565	COG0395	ABC-type sugar transport system, permease component
EYC55_10590	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
EYC55_10600	COG2957	Belongs to the agmatine deiminase family
EYC55_10610	COG0257	Belongs to the bacterial ribosomal protein bL36 family
EYC55_10615	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
EYC55_10620	COG0539	negative regulation of cytoplasmic translation
EYC55_10635	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
EYC55_10640	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
EYC55_10650	COG1210	Utp--glucose-1-phosphate uridylyltransferase
EYC55_10675	COG0518	GMP synthase (glutamine-hydrolyzing) activity
EYC55_10675	COG0519	Catalyzes the synthesis of GMP from XMP
EYC55_10685	COG0464	growth
EYC55_10700	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
EYC55_10705	COG0583	DNA-binding transcription factor activity
EYC55_10735	COG0583	DNA-binding transcription factor activity
EYC55_10760	COG1914	H( )-stimulated, divalent metal cation uptake system
EYC55_10765	COG1321	iron dependent repressor
EYC55_10770	COG0590	tRNA wobble adenosine to inosine editing
EYC55_10780	COG0668	transmembrane transport
EYC55_10790	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
EYC55_10805	COG1028	Short-chain dehydrogenase reductase Sdr
EYC55_10810	COG1183	phosphatidylcholine synthase activity
EYC55_10820	COG3243	poly(R)-hydroxyalkanoic acid synthase
EYC55_10835	COG0723	plastoquinol--plastocyanin reductase activity
EYC55_10835	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
EYC55_10845	COG2183	response to ionizing radiation
EYC55_10860	COG2205	protein histidine kinase activity
EYC55_10860	COG0784	Response regulator, receiver
EYC55_10950	COG3039	Transposase
EYC55_10975	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
EYC55_11010	COG1530	ribonuclease E activity
EYC55_11020	COG3064	Membrane
EYC55_11040	COG2154	pterin-4-alpha-carbinolamine dehydratase
EYC55_11065	COG3501	Rhs element vgr protein
EYC55_11105	COG2826	transposase and inactivated derivatives, IS30 family
EYC55_11200	COG3501	Rhs element vgr protein
EYC55_11235	COG0631	protein serine/threonine phosphatase activity
EYC55_11270	COG1858	cytochrome C peroxidase
EYC55_11315	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
EYC55_11320	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
EYC55_11445	COG3501	Rhs element vgr protein
EYC55_11525	COG4566	intracellular signal transduction
EYC55_11535	COG5001	Diguanylate cyclase
EYC55_11555	COG3685	Protein conserved in bacteria
EYC55_11590	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
EYC55_11590	COG1648	precorrin-2 dehydrogenase activity
EYC55_11615	COG0746	molybdenum cofactor guanylyltransferase activity
EYC55_11630	COG0708	Exodeoxyribonuclease III
EYC55_11645	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
EYC55_11655	COG0303	'Molybdopterin
EYC55_11660	COG1160	GTP binding
EYC55_11665	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
EYC55_11690	COG0105	UTP biosynthetic process
EYC55_11700	COG1024	Enoyl-CoA hydratase
EYC55_11700	COG1250	3-hydroxyacyl-CoA dehydrogenase
EYC55_11705	COG0183	Belongs to the thiolase family
EYC55_11710	COG0038	chloride channel
EYC55_11730	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
EYC55_11755	COG1674	ftsk spoiiie
EYC55_11760	COG0492	ferredoxin-NADP+ reductase activity
EYC55_11780	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
EYC55_11785	COG0542	response to heat
EYC55_11790	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
EYC55_11800	COG0482	sulfurtransferase activity
EYC55_11830	COG4585	Histidine kinase
EYC55_11840	COG5002	protein histidine kinase activity
EYC55_11860	COG0784	Response regulator, receiver
EYC55_11860	COG0835	chemotaxis
EYC55_11870	COG1558	bacterial-type flagellum-dependent cell motility
EYC55_11875	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
EYC55_11880	COG1749	Flagellar hook protein flgE
EYC55_11885	COG4787	bacterial-type flagellum-dependent cell motility
EYC55_11890	COG4786	Flagellar basal body rod
EYC55_11895	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
EYC55_11900	COG1706	bacterial-type flagellum-dependent cell motility
EYC55_11920	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
EYC55_11925	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
EYC55_11955	COG2201	protein-glutamate methylesterase activity
EYC55_11960	COG2204	response regulator
EYC55_11975	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
EYC55_11985	COG1028	Short-chain dehydrogenase reductase Sdr
EYC55_12025	COG3039	Transposase
EYC55_12045	COG1677	Flagellar hook-basal body complex protein FliE
EYC55_12095	COG3190	flagellar
EYC55_12110	COG1987	bacterial-type flagellum assembly
EYC55_12115	COG1684	flagellar biosynthetic protein fliR
EYC55_12120	COG3300	MHYT domain
EYC55_12120	COG5001	Diguanylate cyclase
EYC55_12125	COG3300	MHYT domain
EYC55_12125	COG5001	Diguanylate cyclase
EYC55_12150	COG0455	bacterial-type flagellum organization
EYC55_12170	COG0643	Histidine kinase
EYC55_12170	COG2198	Histidine kinase
EYC55_12240	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
EYC55_12265	COG0811	peptide transport
EYC55_12285	COG4591	ABC-type transport system involved in lipoprotein release permease component
EYC55_12300	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
EYC55_12315	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
EYC55_12330	COG0354	folic acid binding
EYC55_12345	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
EYC55_12355	COG0363	glucosamine-6-phosphate deaminase activity
EYC55_12360	COG0129	dihydroxy-acid dehydratase activity
EYC55_12365	COG0800	Aldolase
EYC55_12505	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
EYC55_12510	COG4774	siderophore transport
EYC55_12520	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
EYC55_12525	COG1360	Flagellar Motor Protein
EYC55_12530	COG1192	Involved in chromosome partitioning
EYC55_12535	COG0835	chemotaxis
EYC55_12545	COG0745	RESPONSE REGULATOR receiver
EYC55_12555	COG0840	transmembrane signaling receptor activity
EYC55_12580	COG0840	transmembrane signaling receptor activity
EYC55_12595	COG0840	transmembrane signaling receptor activity
EYC55_12600	COG0840	transmembrane signaling receptor activity
EYC55_12605	COG0840	transmembrane signaling receptor activity
EYC55_12615	COG0840	transmembrane signaling receptor activity
EYC55_12625	COG0840	transmembrane signaling receptor activity
EYC55_12630	COG0840	transmembrane signaling receptor activity
EYC55_12635	COG0840	transmembrane signaling receptor activity
EYC55_12640	COG0840	transmembrane signaling receptor activity
EYC55_12645	COG0840	transmembrane signaling receptor activity
EYC55_12665	COG0835	chemotaxis
EYC55_12675	COG0840	transmembrane signaling receptor activity
EYC55_12710	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
EYC55_12740	COG0318	PFAM AMP-dependent synthetase and ligase
EYC55_12745	COG1024	Enoyl-CoA hydratase
EYC55_12750	COG0784	Response regulator, receiver
EYC55_12750	COG2205	protein histidine kinase activity
EYC55_12750	COG2198	Histidine kinase
EYC55_12775	COG3279	Response regulator of the LytR AlgR family
EYC55_12790	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
EYC55_12800	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
EYC55_12805	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
EYC55_12815	COG0505	Belongs to the CarA family
EYC55_12820	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
EYC55_12825	COG2258	MOSC domain
EYC55_12830	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
EYC55_12880	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
EYC55_12905	COG0277	FAD linked oxidase domain protein
EYC55_12910	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
EYC55_12920	COG0531	amino acid
EYC55_12925	COG0531	amino acid
EYC55_12930	COG0235	Class ii aldolase
EYC55_12955	COG0140	phosphoribosyl-ATP diphosphatase activity
EYC55_12955	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
EYC55_13005	COG0124	histidyl-tRNA synthetase
EYC55_13025	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
EYC55_13105	COG2814	Major facilitator Superfamily
EYC55_13180	COG1012	belongs to the aldehyde dehydrogenase family
EYC55_13200	COG0812	UDP-N-acetylmuramate dehydrogenase activity
EYC55_13205	COG0697	spore germination
EYC55_13215	COG1794	racemase activity, acting on amino acids and derivatives
EYC55_13235	COG0671	phosphoesterase, PA-phosphatase related
EYC55_13250	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
EYC55_13260	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
EYC55_13270	COG4251	negative regulation of phosphorylation
EYC55_13270	COG5001	Diguanylate cyclase
EYC55_13270	COG3706	GGDEF domain
EYC55_13270	COG2203	Gaf domain
EYC55_13290	COG1472	Belongs to the glycosyl hydrolase 3 family
EYC55_13320	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
EYC55_13340	COG0617	tRNA 3'-terminal CCA addition
EYC55_13355	COG0860	N-Acetylmuramoyl-L-alanine amidase
EYC55_13375	COG0477	Major facilitator Superfamily
EYC55_13385	COG1070	Carbohydrate kinase
EYC55_13410	COG0800	Aldolase
EYC55_13425	COG3734	2-keto-3-deoxy-galactonokinase
EYC55_13430	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
EYC55_13440	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
EYC55_13455	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
EYC55_13460	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
EYC55_13470	COG0351	phosphomethylpyrimidine kinase
EYC55_13470	COG0352	thiamine-phosphate diphosphorylase activity
EYC55_13495	COG0583	DNA-binding transcription factor activity
EYC55_13500	COG1741	Belongs to the pirin family
EYC55_13530	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
EYC55_13560	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
EYC55_13570	COG2137	regulation of response to DNA damage stimulus
EYC55_13595	COG1546	Belongs to the CinA family
EYC55_13600	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
EYC55_13605	COG1923	regulation of RNA biosynthetic process
EYC55_13615	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
EYC55_13620	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
EYC55_13630	COG1534	Rna-binding protein
EYC55_13645	COG1238	metal cluster binding
EYC55_13660	COG2840	Smr protein MutS2
EYC55_13690	COG0148	phosphopyruvate hydratase activity
EYC55_13750	COG1253	flavin adenine dinucleotide binding
EYC55_13765	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
EYC55_13785	COG2271	Major facilitator Superfamily
EYC55_13795	COG1132	(ABC) transporter
EYC55_13800	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
EYC55_13815	COG0438	transferase activity, transferring glycosyl groups
EYC55_13825	COG2264	protein methyltransferase activity
EYC55_13855	COG2244	polysaccharide biosynthetic process
EYC55_13905	COG1595	DNA-templated transcription, initiation
EYC55_13920	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
EYC55_13940	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
EYC55_13955	COG4191	Histidine kinase
EYC55_13955	COG0784	Response regulator, receiver
EYC55_13960	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
EYC55_13965	COG0784	Response regulator, receiver
EYC55_13965	COG4191	Histidine kinase
EYC55_13980	COG0840	transmembrane signaling receptor activity
EYC55_14005	COG3501	Rhs element vgr protein
EYC55_14060	COG0583	DNA-binding transcription factor activity
EYC55_14075	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
EYC55_14100	COG1605	Chorismate mutase
EYC55_14100	COG0077	Prephenate dehydratase
EYC55_14105	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
EYC55_14110	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
EYC55_14160	COG2986	histidine ammonia-lyase
EYC55_14170	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
EYC55_14270	COG4206	TonB-dependent receptor
EYC55_14325	COG0531	amino acid
EYC55_14340	COG0006	proline dipeptidase activity
EYC55_14350	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
EYC55_14365	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
EYC55_14370	COG3938	Belongs to the proline racemase family
EYC55_14380	COG0552	protein localization to endoplasmic reticulum
EYC55_14395	COG1194	a g-specific adenine glycosylase
EYC55_14405	COG4191	Histidine kinase
EYC55_14405	COG0784	Response regulator, receiver
EYC55_14410	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
EYC55_14430	COG3040	lipid binding
EYC55_14440	COG1960	acyl-CoA dehydrogenase activity
EYC55_14490	COG0438	transferase activity, transferring glycosyl groups
EYC55_14495	COG0438	transferase activity, transferring glycosyl groups
EYC55_14540	COG0776	regulation of translation
EYC55_14550	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
EYC55_14555	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
EYC55_14560	COG0291	Belongs to the bacterial ribosomal protein bL35 family
EYC55_14565	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
EYC55_14595	COG0556	nucleotide-excision repair
EYC55_14600	COG4969	Belongs to the N-Me-Phe pilin family
EYC55_14640	COG1611	Belongs to the LOG family
EYC55_14655	COG2095	MarC family integral membrane protein
EYC55_14665	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
EYC55_14670	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
EYC55_14705	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
EYC55_14720	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
EYC55_14725	COG0195	Participates in both transcription termination and antitermination
EYC55_14740	COG1007	ATP synthesis coupled electron transport
EYC55_14755	COG0713	ATP synthesis coupled electron transport
EYC55_14770	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
EYC55_14775	COG1034	ATP synthesis coupled electron transport
EYC55_14780	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
EYC55_14785	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
EYC55_14805	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
EYC55_14825	COG1028	Short-chain dehydrogenase reductase Sdr
EYC55_14880	COG0133	tryptophan synthase activity
EYC55_14915	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
EYC55_14920	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
EYC55_14930	COG2890	protein-(glutamine-N5) methyltransferase activity
EYC55_14960	COG0433	COG0433 Predicted ATPase
EYC55_14985	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
EYC55_14995	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
EYC55_15030	COG0489	protein tyrosine kinase activity
EYC55_15035	COG3039	Transposase
EYC55_15100	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
EYC55_15105	COG2311	Membrane
EYC55_15110	COG1047	Peptidyl-prolyl cis-trans
EYC55_15115	COG0791	NLP P60 protein
EYC55_15120	COG0791	NLP P60 protein
EYC55_15135	COG4106	trans-aconitate 2-methyltransferase activity
EYC55_15140	COG1301	dicarboxylic acid transport
EYC55_15145	COG1785	Belongs to the alkaline phosphatase family
EYC55_15150	COG0037	tRNA processing
EYC55_15155	COG1722	exodeoxyribonuclease VII activity
EYC55_15160	COG0142	geranyltranstransferase activity
EYC55_15165	COG4104	PAAR repeat-containing protein
EYC55_15180	COG0312	modulator of DNA gyrase
EYC55_15190	COG0312	modulator of DNA gyrase
EYC55_15200	COG3164	Protein of unknown function
EYC55_15205	COG1530	ribonuclease E activity
EYC55_15215	COG2968	Membrane
EYC55_15265	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
EYC55_15295	COG3118	belongs to the thioredoxin family
EYC55_15370	COG1132	(ABC) transporter
EYC55_15400	COG0745	RESPONSE REGULATOR receiver
EYC55_15405	COG5002	protein histidine kinase activity
EYC55_15405	COG5000	phosphorelay sensor kinase activity
EYC55_15410	COG0475	glutathione-regulated potassium exporter activity
EYC55_15415	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
EYC55_15440	COG1187	pseudouridine synthase activity
EYC55_15445	COG5001	Diguanylate cyclase
EYC55_15445	COG5002	protein histidine kinase activity
EYC55_15580	COG0735	belongs to the Fur family
EYC55_15620	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
EYC55_15630	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
EYC55_15640	COG0643	Histidine kinase
EYC55_15640	COG2198	Histidine kinase
EYC55_15650	COG0840	transmembrane signaling receptor activity
EYC55_15655	COG0835	chemotaxis
EYC55_15660	COG2202	Pas domain
EYC55_15660	COG2200	EAL domain
EYC55_15660	COG2199	diguanylate cyclase activity
EYC55_15665	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
EYC55_15680	COG3501	Rhs element vgr protein
EYC55_15710	COG1515	deoxyribonuclease V activity
EYC55_15720	COG1741	Belongs to the pirin family
EYC55_15745	COG1262	PFAM Formylglycine-generating sulfatase enzyme
EYC55_15755	COG1262	PFAM Formylglycine-generating sulfatase enzyme
EYC55_15765	COG2826	transposase and inactivated derivatives, IS30 family
EYC55_15775	COG1262	PFAM Formylglycine-generating sulfatase enzyme
EYC55_15785	COG3501	Rhs element vgr protein
EYC55_15795	COG1741	Belongs to the pirin family
EYC55_15800	COG1966	Carbon starvation protein
EYC55_15805	COG2879	small protein
EYC55_15860	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
EYC55_15865	COG1529	Aldehyde oxidase and xanthine dehydrogenase
EYC55_15870	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
EYC55_15875	COG2080	2 iron, 2 sulfur cluster binding
EYC55_15885	COG3706	GGDEF domain
EYC55_15885	COG2203	Gaf domain
EYC55_15885	COG4251	negative regulation of phosphorylation
EYC55_15885	COG5001	Diguanylate cyclase
EYC55_15900	COG3039	Transposase
EYC55_15945	COG0629	single-stranded DNA binding
EYC55_15950	COG0142	geranyltranstransferase activity
EYC55_15980	COG0527	aspartate kinase activity
EYC55_15990	COG0384	phenazine biosynthesis protein PhzF
EYC55_16000	COG1764	response to oxidative stress
EYC55_16010	COG0540	Belongs to the ATCase OTCase family
EYC55_16020	COG1678	Uncharacterized ACR, COG1678
EYC55_16030	COG0519	Catalyzes the synthesis of GMP from XMP
EYC55_16060	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
EYC55_16095	COG0693	protein deglycase activity
EYC55_16115	COG1959	2 iron, 2 sulfur cluster binding
EYC55_16120	COG0719	Fe-S assembly protein
EYC55_16125	COG0396	ATPase activity
EYC55_16130	COG0719	Fe-S assembly protein
EYC55_16135	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
EYC55_16160	COG1555	photosystem II stabilization
EYC55_16165	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
EYC55_16175	COG3178	'Phosphotransferase
EYC55_16180	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
EYC55_16190	COG0628	permease
EYC55_16215	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
EYC55_16240	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
EYC55_16250	COG0271	Belongs to the BolA IbaG family
EYC55_16260	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
EYC55_16270	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
EYC55_16275	COG1137	ATPase activity
EYC55_16290	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
EYC55_16310	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
EYC55_16315	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
EYC55_16325	COG2239	Acts as a magnesium transporter
EYC55_16335	COG1294	oxidase, subunit
EYC55_16340	COG1271	oxidase subunit
EYC55_16350	COG1113	amino acid transport
EYC55_16365	COG2197	response regulator
EYC55_16370	COG0531	amino acid
EYC55_16425	COG0789	Transcriptional regulator
EYC55_16440	COG0754	glutathionylspermidine amidase activity
EYC55_16465	COG1842	Phage shock protein A
EYC55_16530	COG3501	Rhs element vgr protein
EYC55_16595	COG3501	Rhs element vgr protein
EYC55_16660	COG3501	Rhs element vgr protein
EYC55_16810	COG3501	Rhs element vgr protein
EYC55_16815	COG1262	PFAM Formylglycine-generating sulfatase enzyme
EYC55_16825	COG3039	Transposase
EYC55_16835	COG1262	PFAM Formylglycine-generating sulfatase enzyme
EYC55_16845	COG1262	PFAM Formylglycine-generating sulfatase enzyme
EYC55_16855	COG1262	PFAM Formylglycine-generating sulfatase enzyme
EYC55_16865	COG3501	Rhs element vgr protein
EYC55_16925	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
EYC55_16950	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
EYC55_16965	COG2197	response regulator
EYC55_16970	COG4585	Histidine kinase
EYC55_16985	COG2894	cell division
EYC55_16990	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
EYC55_17005	COG0642	Histidine kinase
EYC55_17010	COG0745	RESPONSE REGULATOR receiver
EYC55_17015	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
EYC55_17025	COG2194	sulfuric ester hydrolase activity
EYC55_17055	COG3551	Protein conserved in bacteria
EYC55_17065	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
EYC55_17065	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
EYC55_17095	COG0753	catalase activity
EYC55_17135	COG2207	Transcriptional regulator
EYC55_17135	COG1917	Cupin 2, conserved barrel domain protein
EYC55_17145	COG1506	peptidase
EYC55_17145	COG0823	Involved in the tonB-independent uptake of proteins
EYC55_17165	COG1297	OPT oligopeptide transporter protein
EYC55_17185	COG0587	DNA-directed DNA polymerase activity
EYC55_17310	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
EYC55_17345	COG3501	Rhs element vgr protein
EYC55_17360	COG0308	aminopeptidase N
EYC55_17365	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
EYC55_17375	COG0330	HflC and HflK could
EYC55_17380	COG0330	HflC and HflK could
EYC55_17470	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
EYC55_17485	COG3829	transcription factor binding
EYC55_17515	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
EYC55_17520	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
EYC55_17535	COG1028	Short-chain dehydrogenase reductase Sdr
EYC55_17560	COG1399	metal-binding, possibly nucleic acid-binding protein
EYC55_17580	COG0714	Associated with various cellular activities
EYC55_17600	COG0537	adenosine 5'-monophosphoramidase activity
EYC55_17610	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
EYC55_17630	COG0314	molybdopterin synthase activity
EYC55_17635	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
EYC55_17650	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
EYC55_17655	COG1234	tRNA 3'-trailer cleavage
EYC55_17665	COG0859	PFAM glycosyl transferase family 9
EYC55_17680	COG0631	protein serine/threonine phosphatase activity
EYC55_17690	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
EYC55_17715	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
EYC55_17750	COG0740	serine-type endopeptidase activity
EYC55_17755	COG0544	peptidyl-prolyl cis-trans isomerase activity
EYC55_17765	COG3852	Histidine kinase
EYC55_17810	COG0473	3-isopropylmalate dehydrogenase activity
EYC55_17825	COG4783	chaperone-mediated protein folding
EYC55_17840	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
EYC55_17850	COG0438	transferase activity, transferring glycosyl groups
EYC55_17855	COG0671	phosphoesterase, PA-phosphatase related
EYC55_17870	COG3291	Pkd domain containing protein
EYC55_17880	COG2833	Protein of unknown function (DUF455)
EYC55_17900	COG0285	dihydrofolate synthase activity
EYC55_17915	COG0406	alpha-ribazole phosphatase activity
EYC55_17940	COG1063	alcohol dehydrogenase
EYC55_17950	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
EYC55_17955	COG4208	sulfate ABC transporter
EYC55_17960	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
EYC55_17965	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
EYC55_17970	COG0156	8-amino-7-oxononanoate synthase activity
EYC55_18005	COG1902	pentaerythritol trinitrate reductase activity
EYC55_18005	COG0446	pyridine nucleotide-disulphide oxidoreductase
EYC55_18025	COG0584	glycerophosphoryl diester phosphodiesterase
EYC55_18035	COG0625	glutathione transferase activity
EYC55_18045	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
EYC55_18070	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
EYC55_18080	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
EYC55_18085	COG0203	ribosomal protein L17
EYC55_18090	COG0202	RNA polymerase activity
EYC55_18100	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
EYC55_18105	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
EYC55_18110	COG0201	protein transport
EYC55_18115	COG0200	Binds to the 23S rRNA
EYC55_18120	COG1841	ribosomal large subunit assembly
EYC55_18125	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
EYC55_18130	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
EYC55_18145	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
EYC55_18155	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
EYC55_18165	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
EYC55_18170	COG0255	Belongs to the universal ribosomal protein uL29 family
EYC55_18175	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
EYC55_18195	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
EYC55_18200	COG0089	rRNA binding
EYC55_18240	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
EYC55_18255	COG0222	ribosome binding
EYC55_18260	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
EYC55_18265	COG0081	regulation of translation
EYC55_18280	COG0250	Participates in transcription elongation, termination and antitermination
EYC55_18285	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
EYC55_18315	COG0012	GTP binding
EYC55_18330	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
EYC55_18355	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
EYC55_18370	COG0521	Mo-molybdopterin cofactor biosynthetic process
EYC55_18390	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
EYC55_18395	COG1295	ribonuclease BN
EYC55_18425	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
EYC55_18435	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
EYC55_18460	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
EYC55_18465	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
EYC55_18485	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
EYC55_18535	COG2890	protein-(glutamine-N5) methyltransferase activity
EYC55_18545	COG3634	alkyl hydroperoxide reductase activity
EYC55_18550	COG0583	DNA-binding transcription factor activity
EYC55_18565	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
EYC55_18570	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
EYC55_18580	COG2197	response regulator
EYC55_18590	COG0745	RESPONSE REGULATOR receiver
EYC55_18590	COG3706	GGDEF domain
EYC55_18620	COG0697	spore germination
EYC55_18650	COG3386	PFAM SMP-30 Gluconolaconase
EYC55_18670	COG1024	Enoyl-CoA hydratase
EYC55_18685	COG0583	DNA-binding transcription factor activity
EYC55_18690	COG3384	dioxygenase
EYC55_18700	COG1802	Transcriptional regulator
EYC55_18720	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
EYC55_18725	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
EYC55_18735	COG2096	Adenosyltransferase
EYC55_18740	COG0123	including yeast histone deacetylase and acetoin utilization protein
EYC55_18755	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
EYC55_18775	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
EYC55_18815	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
EYC55_18835	COG0642	Histidine kinase
EYC55_18850	COG4181	ATPase activity
EYC55_18860	COG2175	clavaminate synthase activity
EYC55_18870	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
EYC55_18875	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
EYC55_18900	COG0667	Aldo Keto reductase
EYC55_18910	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
EYC55_18915	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
EYC55_18925	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
EYC55_18940	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
EYC55_18985	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
EYC55_19055	COG3321	synthase
EYC55_19055	COG0604	alcohol dehydrogenase
EYC55_19055	COG1028	Short-chain dehydrogenase reductase Sdr
EYC55_19070	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
EYC55_19085	COG0494	nUDIX hydrolase
EYC55_19100	COG4942	peptidase
EYC55_19100	COG1388	LysM domain
EYC55_19125	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
EYC55_19130	COG1181	Belongs to the D-alanine--D-alanine ligase family
EYC55_19150	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
EYC55_19155	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
EYC55_19170	COG3116	cell division
EYC55_19210	COG1988	membrane-bound metal-dependent
EYC55_19215	COG0277	FAD linked oxidase domain protein
EYC55_19220	COG0745	RESPONSE REGULATOR receiver
EYC55_19225	COG2205	protein histidine kinase activity
EYC55_19235	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
EYC55_19240	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
EYC55_19265	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
EYC55_19295	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
EYC55_19295	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
EYC55_19305	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
EYC55_19335	COG0488	(ABC) transporter
EYC55_19380	COG0745	RESPONSE REGULATOR receiver
EYC55_19385	COG2205	protein histidine kinase activity
EYC55_19485	COG0726	polysaccharide deacetylase
EYC55_19485	COG1649	PFAM Uncharacterised BCR, COG1649
EYC55_19490	COG1215	transferase activity, transferring glycosyl groups
EYC55_19500	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
EYC55_19505	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
EYC55_19510	COG1609	Transcriptional regulator
EYC55_19535	COG3250	beta-galactosidase activity
EYC55_19570	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
EYC55_19575	COG4191	Histidine kinase
EYC55_19580	COG0784	Response regulator, receiver
EYC55_19585	COG4251	negative regulation of phosphorylation
EYC55_19590	COG2823	Periplasmic or secreted lipoprotein
EYC55_19595	COG0673	inositol 2-dehydrogenase activity
EYC55_19600	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
EYC55_19635	COG1051	belongs to the nudix hydrolase family
EYC55_19635	COG1056	cytidyltransferase-related domain
EYC55_19675	COG1686	Belongs to the peptidase S11 family
EYC55_19680	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
EYC55_19685	COG2951	lytic endotransglycosylase activity
EYC55_19730	COG0772	Belongs to the SEDS family
EYC55_19745	COG1792	Involved in formation and maintenance of cell shape
EYC55_19750	COG1077	Cell shape determining protein MreB Mrl
EYC55_19770	COG0308	aminopeptidase N
EYC55_19775	COG5001	Diguanylate cyclase
EYC55_19775	COG3300	MHYT domain
EYC55_19810	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
EYC55_19820	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
EYC55_19840	COG2832	Protein of unknown function (DUF454)
EYC55_19860	COG1505	serine-type exopeptidase activity
EYC55_19895	COG3275	phosphorelay sensor kinase activity
EYC55_19930	COG0659	secondary active sulfate transmembrane transporter activity
EYC55_19935	COG5297	Belongs to the glycosyl hydrolase family 6
EYC55_19935	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
EYC55_19945	COG0840	transmembrane signaling receptor activity
EYC55_20010	COG0598	Magnesium transport protein CorA
EYC55_20020	COG1113	amino acid transport
EYC55_20030	COG5297	Belongs to the glycosyl hydrolase family 6
EYC55_20035	COG4305	rare lipoprotein A
EYC55_20040	COG0697	spore germination
EYC55_20090	COG4221	oxidoreductase activity
EYC55_20175	COG2353	YceI-like domain
EYC55_20205	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
EYC55_20220	COG3386	PFAM SMP-30 Gluconolaconase
EYC55_20235	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
EYC55_20240	COG3550	peptidyl-serine autophosphorylation
EYC55_20260	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
EYC55_20285	COG1252	NADH dehydrogenase
EYC55_20290	COG2860	membrane
EYC55_20295	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
EYC55_20305	COG3437	response regulator, receiver
EYC55_20310	COG2177	Part of the ABC transporter FtsEX involved in
EYC55_20315	COG2884	Cell division ATP-binding protein ftsE
EYC55_20325	COG3118	belongs to the thioredoxin family
EYC55_20330	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
EYC55_20385	COG1473	amidohydrolase
EYC55_20395	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
EYC55_20425	COG5383	Protein conserved in bacteria
EYC55_20480	COG3023	N-Acetylmuramoyl-L-alanine amidase
EYC55_20490	COG4948	Mandelate Racemase Muconate Lactonizing
EYC55_20515	COG0531	amino acid
EYC55_20535	COG4682	membrane
EYC55_20540	COG2133	pyrroloquinoline quinone binding
EYC55_20560	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
EYC55_20570	COG0828	Belongs to the bacterial ribosomal protein bS21 family
EYC55_20575	COG1610	YqeY-like protein
EYC55_20590	COG1295	ribonuclease BN
EYC55_20595	COG0358	DNA primase activity
EYC55_20655	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
EYC55_20670	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
EYC55_20730	COG0739	heme binding
EYC55_20745	COG2211	Major facilitator Superfamily
EYC55_20750	COG0708	Exodeoxyribonuclease III
EYC55_20765	COG1192	Involved in chromosome partitioning
EYC55_20770	COG1475	DNA binding
EYC55_20785	COG0463	Glycosyl transferase, family 2
EYC55_20805	COG0756	dUTP diphosphatase activity
EYC55_20810	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
EYC55_20835	COG4221	oxidoreductase activity
EYC55_20905	COG2826	transposase and inactivated derivatives, IS30 family
EYC55_20925	COG3209	COG3209 Rhs family protein
EYC55_20960	COG1858	cytochrome C peroxidase
EYC55_20975	COG0702	epimerase
EYC55_21000	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
EYC55_21015	COG0745	RESPONSE REGULATOR receiver
EYC55_21015	COG3706	GGDEF domain
EYC55_21025	COG2354	Protein conserved in bacteria
EYC55_21035	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
EYC55_21050	COG3264	Mechanosensitive ion channel
EYC55_21050	COG1511	domain protein
EYC55_21130	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
EYC55_21225	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
EYC55_21230	COG1040	competence protein
EYC55_21300	COG3541	Predicted nucleotidyltransferase
EYC55_21320	COG1414	Transcriptional regulator
EYC55_21335	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
EYC55_21340	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
EYC55_21355	COG3485	protocatechuate 3,4-dioxygenase
EYC55_21360	COG3485	protocatechuate 3,4-dioxygenase
EYC55_21370	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
EYC55_21375	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
EYC55_21450	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
EYC55_21470	COG3501	Rhs element vgr protein
EYC55_21490	COG3039	Transposase
EYC55_21515	COG1733	regulation of RNA biosynthetic process
EYC55_21520	COG0702	epimerase
EYC55_21550	COG0583	DNA-binding transcription factor activity
EYC55_21555	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
EYC55_21575	COG0745	RESPONSE REGULATOR receiver
EYC55_21605	COG1902	pentaerythritol trinitrate reductase activity
EYC55_21610	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
EYC55_21620	COG2814	Major facilitator Superfamily
EYC55_21625	COG0583	DNA-binding transcription factor activity
EYC55_21645	COG0084	hydrolase, TatD family'
EYC55_21700	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
EYC55_21720	COG2072	flavoprotein involved in K transport
EYC55_21725	COG4807	Protein conserved in bacteria
EYC55_21740	COG1643	Atp-dependent helicase
EYC55_21755	COG1187	pseudouridine synthase activity
EYC55_21765	COG0667	Aldo Keto reductase
EYC55_21770	COG2130	NADP-dependent
EYC55_21775	COG0656	L-ascorbic acid biosynthetic process
EYC55_21795	COG3501	Rhs element vgr protein
EYC55_21825	COG2826	transposase and inactivated derivatives, IS30 family
EYC55_21850	COG1764	response to oxidative stress
EYC55_21855	COG1846	Transcriptional regulator
EYC55_21860	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
EYC55_21870	COG0697	spore germination
EYC55_21880	COG0523	cobalamin synthesis protein
EYC55_21930	COG1960	acyl-CoA dehydrogenase activity
EYC55_21935	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
EYC55_21970	COG3706	GGDEF domain
EYC55_21985	COG0339	signal peptide processing
EYC55_22015	COG0564	pseudouridine synthase activity
EYC55_22045	COG1181	Belongs to the D-alanine--D-alanine ligase family
EYC55_22065	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
EYC55_22070	COG0318	PFAM AMP-dependent synthetase and ligase
EYC55_22080	COG0596	Alpha beta hydrolase
EYC55_22095	COG3177	Filamentation induced by cAMP protein fic
EYC55_22100	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
EYC55_22115	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
EYC55_22140	COG4191	Histidine kinase
EYC55_22145	COG0028	Belongs to the TPP enzyme family
EYC55_22150	COG3039	Transposase
EYC55_22160	COG3039	Transposase
EYC55_22165	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
EYC55_22190	COG1749	Flagellar hook protein flgE
EYC55_22195	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
EYC55_22210	COG1157	protein secretion by the type III secretion system
EYC55_22225	COG1766	The M ring may be actively involved in energy transduction
EYC55_22230	COG1677	Flagellar hook-basal body complex protein FliE
EYC55_22235	COG1558	bacterial-type flagellum-dependent cell motility
EYC55_22245	COG1706	bacterial-type flagellum-dependent cell motility
EYC55_22260	COG4786	Flagellar basal body rod
EYC55_22265	COG4786	Flagellar basal body rod
EYC55_22270	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
EYC55_22275	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
EYC55_22310	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
EYC55_22360	COG2826	transposase and inactivated derivatives, IS30 family
EYC55_22430	COG3039	Transposase
EYC55_22445	COG3039	Transposase
EYC55_22475	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
EYC55_22480	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
EYC55_22525	COG0183	Belongs to the thiolase family
EYC55_22540	COG2032	superoxide dismutase activity
EYC55_22545	COG2032	superoxide dismutase activity
EYC55_22550	COG2204	response regulator
EYC55_22555	COG3852	Histidine kinase
EYC55_22560	COG0004	ammonium transporteR
EYC55_22565	COG0347	Belongs to the P(II) protein family
EYC55_22570	COG0174	glutamine synthetase
EYC55_22625	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
EYC55_22635	COG2062	phosphohistidine phosphatase, SixA
EYC55_22640	COG0489	protein tyrosine kinase activity
EYC55_22660	COG1396	sequence-specific DNA binding
EYC55_22665	COG3550	peptidyl-serine autophosphorylation
EYC55_22670	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
EYC55_22675	COG1262	PFAM Formylglycine-generating sulfatase enzyme
EYC55_22690	COG1125	glycine betaine transport
EYC55_22690	COG0517	IMP dehydrogenase activity
EYC55_22705	COG1119	ATPase activity
EYC55_22715	COG1473	amidohydrolase
EYC55_22720	COG1752	Esterase of the alpha-beta hydrolase superfamily
EYC55_22725	COG4773	Receptor
EYC55_22730	COG1522	sequence-specific DNA binding
EYC55_22735	COG3186	Phenylalanine-4-hydroxylase
EYC55_22760	COG1609	Transcriptional regulator
EYC55_22785	COG0366	Alpha amylase catalytic
EYC55_22790	COG0366	Alpha amylase catalytic
EYC55_22800	COG2831	hemolysin activation secretion protein
EYC55_22860	COG3039	Transposase
EYC55_22875	COG3210	domain, Protein
EYC55_22890	COG3039	Transposase
EYC55_22940	COG2826	transposase and inactivated derivatives, IS30 family
EYC55_22955	COG3210	domain, Protein
EYC55_23005	COG3693	PFAM glycoside hydrolase, family 10
EYC55_23030	COG2211	Major facilitator Superfamily
EYC55_23045	COG3039	Transposase
EYC55_23050	COG3039	Transposase
EYC55_23095	COG2937	Belongs to the GPAT DAPAT family
EYC55_23135	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
EYC55_23155	COG0210	DNA helicase
EYC55_23170	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
EYC55_23215	COG3135	benzoate transporter
EYC55_23235	COG0676	glucose-6-phosphate 1-epimerase activity
EYC55_23250	COG0730	response to heat
EYC55_23280	COG0302	gtp cyclohydrolase
EYC55_23310	COG0477	Major facilitator Superfamily
EYC55_23325	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
EYC55_23350	COG2826	transposase and inactivated derivatives, IS30 family
EYC55_23385	COG0564	pseudouridine synthase activity
EYC55_23500	COG1074	ATP-dependent DNA helicase activity
EYC55_23505	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
EYC55_23510	COG3039	Transposase
EYC55_23515	COG3039	Transposase
EYC55_23520	COG3039	Transposase
EYC55_23535	COG1127	ABC transporter
EYC55_23540	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
EYC55_23545	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
EYC55_23560	COG2853	Lipoprotein
EYC55_23570	COG0386	Belongs to the glutathione peroxidase family
EYC55_23580	COG1322	Protein conserved in bacteria
EYC55_23595	COG0531	amino acid
EYC55_23620	COG2801	Transposase and inactivated derivatives
EYC55_23625	COG2199	diguanylate cyclase activity
EYC55_23625	COG2203	Gaf domain
EYC55_23635	COG1929	Belongs to the glycerate kinase type-1 family
EYC55_23640	COG2271	Major facilitator Superfamily
EYC55_23655	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
EYC55_23665	COG0861	Integral membrane protein TerC family
EYC55_23675	COG0584	glycerophosphoryl diester phosphodiesterase
EYC55_23685	COG0671	phosphoesterase, PA-phosphatase related
EYC55_23690	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
EYC55_23695	COG0726	polysaccharide deacetylase
EYC55_23710	COG0230	Belongs to the bacterial ribosomal protein bL34 family