locus-tag class description C0L90_00010 PF11638 DnaA N-terminal domain C0L90_00010 PF08299 Bacterial dnaA protein helix-turn-helix C0L90_00010 PF00308 Bacterial dnaA protein C0L90_00015 PF02768 DNA polymerase III beta subunit, C-terminal domain C0L90_00015 PF02767 DNA polymerase III beta subunit, central domain C0L90_00015 PF00712 DNA polymerase III beta subunit, N-terminal domain C0L90_00020 PF02463 RecF/RecN/SMC N terminal domain C0L90_00025 PF01751 Toprim domain C0L90_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_00025 PF18053 DNA gyrase B subunit insert domain C0L90_00025 PF00986 DNA gyrase B subunit, carboxyl terminus C0L90_00025 PF00204 DNA gyrase B C0L90_00035 PF01435 Peptidase family M48 C0L90_00045 PF03544 Gram-negative bacterial TonB protein C-terminal C0L90_00050 PF01618 MotA/TolQ/ExbB proton channel family C0L90_00055 PF02472 Biopolymer transport protein ExbD/TolR C0L90_00060 PF02472 Biopolymer transport protein ExbD/TolR C0L90_00065 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ C0L90_00090 PF05598 Transposase domain (DUF772) C0L90_00095 PF01609 Transposase DDE domain C0L90_00095 PF05598 Transposase domain (DUF772) C0L90_00110 PF04055 Radical SAM superfamily C0L90_00120 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) C0L90_00145 PF13180 PDZ domain C0L90_00145 PF03572 Peptidase family S41 C0L90_00150 PF01551 Peptidase family M23 C0L90_00160 PF04389 Peptidase family M28 C0L90_00170 PF00150 Cellulase (glycosyl hydrolase family 5) C0L90_00185 PF00150 Cellulase (glycosyl hydrolase family 5) C0L90_00195 PF00150 Cellulase (glycosyl hydrolase family 5) C0L90_00205 PF00107 Zinc-binding dehydrogenase C0L90_00205 PF08240 Alcohol dehydrogenase GroES-like domain C0L90_00230 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C0L90_00230 PF07992 Pyridine nucleotide-disulphide oxidoreductase C0L90_00235 PF01493 GXGXG motif C0L90_00235 PF01645 Conserved region in glutamate synthase C0L90_00235 PF00310 Glutamine amidotransferases class-II C0L90_00235 PF04898 Glutamate synthase central domain C0L90_00305 PF00271 Helicase conserved C-terminal domain C0L90_00305 PF09369 Domain of unknown function (DUF1998) C0L90_00305 PF00270 DEAD/DEAH box helicase C0L90_00310 PF03006 Haemolysin-III related C0L90_00340 PF00080 Copper/zinc superoxide dismutase (SODC) C0L90_00345 PF00072 Response regulator receiver domain C0L90_00345 PF00158 Sigma-54 interaction domain C0L90_00345 PF02954 Bacterial regulatory protein, Fis family C0L90_00350 PF00989 PAS fold C0L90_00350 PF00512 His Kinase A (phospho-acceptor) domain C0L90_00350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_00355 PF00909 Ammonium Transporter Family C0L90_00360 PF00543 Nitrogen regulatory protein P-II C0L90_00365 PF03951 Glutamine synthetase, beta-Grasp domain C0L90_00365 PF00120 Glutamine synthetase, catalytic domain C0L90_00370 PF02673 Bacitracin resistance protein BacA C0L90_00415 PF03061 Thioesterase superfamily C0L90_00420 PF13091 PLD-like domain C0L90_00435 PF10609 NUBPL iron-transfer P-loop NTPase C0L90_00435 PF01883 Iron-sulfur cluster assembly protein C0L90_00455 PF01381 Helix-turn-helix C0L90_00460 PF13657 HipA N-terminal domain C0L90_00460 PF07804 HipA-like C-terminal domain C0L90_00465 PF10017 Histidine-specific methyltransferase, SAM-dependent C0L90_00470 PF03781 Sulfatase-modifying factor enzyme 1 C0L90_00470 PF12867 DinB superfamily C0L90_00480 PF00528 Binding-protein-dependent transport system inner membrane component C0L90_00485 PF00571 CBS domain C0L90_00485 PF00005 ABC transporter C0L90_00500 PF00005 ABC transporter C0L90_00515 PF01734 Patatin-like phospholipase C0L90_00525 PF01037 Lrp/AsnC ligand binding domain C0L90_00530 PF00351 Biopterin-dependent aromatic amino acid hydroxylase C0L90_00560 PF00356 Bacterial regulatory proteins, lacI family C0L90_00595 PF00128 Alpha amylase, catalytic domain C0L90_00595 PF02806 Alpha amylase, C-terminal all-beta domain C0L90_00595 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C0L90_00600 PF16657 Maltogenic Amylase, C-terminal domain C0L90_00600 PF00128 Alpha amylase, catalytic domain C0L90_00605 PF11896 Domain of unknown function (DUF3416) C0L90_00605 PF00128 Alpha amylase, catalytic domain C0L90_00615 PF05598 Transposase domain (DUF772) C0L90_00615 PF01609 Transposase DDE domain C0L90_00625 PF00108 Thiolase, N-terminal domain C0L90_00625 PF02803 Thiolase, C-terminal domain C0L90_00665 PF00581 Rhodanese-like domain C0L90_00670 PF02556 Preprotein translocase subunit SecB C0L90_00675 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C0L90_00675 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C0L90_00685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C0L90_00685 PF00205 Thiamine pyrophosphate enzyme, central domain C0L90_00685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C0L90_00690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_00690 PF00512 His Kinase A (phospho-acceptor) domain C0L90_00695 PF02954 Bacterial regulatory protein, Fis family C0L90_00695 PF00072 Response regulator receiver domain C0L90_00695 PF00158 Sigma-54 interaction domain C0L90_00710 PF07690 Major Facilitator Superfamily C0L90_00715 PF01609 Transposase DDE domain C0L90_00715 PF05598 Transposase domain (DUF772) C0L90_00725 PF00588 SpoU rRNA Methylase family C0L90_00740 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C0L90_00740 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C0L90_00745 PF13784 Fic/DOC family N-terminal C0L90_00745 PF02661 Fic/DOC family C0L90_00750 PF00561 alpha/beta hydrolase fold C0L90_00760 PF03692 Putative zinc- or iron-chelating domain C0L90_00765 PF00501 AMP-binding enzyme C0L90_00770 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family C0L90_00785 PF01820 D-ala D-ala ligase N-terminus C0L90_00785 PF07478 D-ala D-ala ligase C-terminus C0L90_00800 PF03109 ABC1 family C0L90_00815 PF00849 RNA pseudouridylate synthase C0L90_00825 PF00472 RF-1 domain C0L90_00845 PF01432 Peptidase family M3 C0L90_00885 PF00326 Prolyl oligopeptidase family C0L90_00890 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C0L90_00890 PF00364 Biotin-requiring enzyme C0L90_00890 PF02785 Biotin carboxylase C-terminal domain C0L90_00890 PF00289 Biotin carboxylase, N-terminal domain C0L90_00900 PF01039 Carboxyl transferase domain C0L90_00905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C0L90_00905 PF02770 Acyl-CoA dehydrogenase, middle domain C0L90_00905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C0L90_00950 PF02492 CobW/HypB/UreG, nucleotide-binding domain C0L90_00950 PF07683 Cobalamin synthesis protein cobW C-terminal domain C0L90_00970 PF03969 AFG1-like ATPase C0L90_00975 PF01047 MarR family C0L90_00980 PF02566 OsmC-like protein C0L90_01000 PF03377 TAL effector repeat C0L90_01005 PF04717 Type VI secretion system, phage-baseplate injector C0L90_01005 PF16671 Actin cross-linking domain C0L90_01030 PF00248 Aldo/keto reductase family C0L90_01045 PF00107 Zinc-binding dehydrogenase C0L90_01045 PF16884 N-terminal domain of oxidoreductase C0L90_01060 PF00849 RNA pseudouridylate synthase C0L90_01075 PF00270 DEAD/DEAH box helicase C0L90_01075 PF04408 Helicase associated domain (HA2) C0L90_01075 PF00271 Helicase conserved C-terminal domain C0L90_01075 PF08482 ATP-dependent helicase C-terminal C0L90_01085 PF07308 Protein of unknown function (DUF1456) C0L90_01090 PF13454 FAD-NAD(P)-binding C0L90_01110 PF00266 Aminotransferase class-V C0L90_01115 PF01546 Peptidase family M20/M25/M40 C0L90_01115 PF07687 Peptidase dimerisation domain C0L90_01155 PF05598 Transposase domain (DUF772) C0L90_01155 PF01609 Transposase DDE domain C0L90_01200 PF01026 TatD related DNase C0L90_01220 PF03466 LysR substrate binding domain C0L90_01220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L90_01225 PF07690 Major Facilitator Superfamily C0L90_01235 PF02146 Sir2 family C0L90_01240 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C0L90_01245 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C0L90_01245 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C0L90_01265 PF00551 Formyl transferase C0L90_01270 PF00486 Transcriptional regulatory protein, C terminal C0L90_01270 PF00072 Response regulator receiver domain C0L90_01290 PF02677 Epoxyqueuosine reductase QueH C0L90_01295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L90_01295 PF03466 LysR substrate binding domain C0L90_01300 PF03358 NADPH-dependent FMN reductase C0L90_01310 PF08267 Cobalamin-independent synthase, N-terminal domain C0L90_01310 PF01717 Cobalamin-independent synthase, Catalytic domain C0L90_01315 PF03812 2-keto-3-deoxygluconate permease C0L90_01325 PF05368 NmrA-like family C0L90_01330 PF01638 HxlR-like helix-turn-helix C0L90_01365 PF05598 Transposase domain (DUF772) C0L90_01365 PF01609 Transposase DDE domain C0L90_01380 PF03377 TAL effector repeat C0L90_01385 PF16671 Actin cross-linking domain C0L90_01385 PF04717 Type VI secretion system, phage-baseplate injector C0L90_01390 PF13495 Phage integrase, N-terminal SAM-like domain C0L90_01390 PF00589 Phage integrase family C0L90_01395 PF05598 Transposase domain (DUF772) C0L90_01400 PF00920 Dehydratase family C0L90_01405 PF03692 Putative zinc- or iron-chelating domain C0L90_01410 PF00132 Bacterial transferase hexapeptide (six repeats) C0L90_01415 PF07690 Major Facilitator Superfamily C0L90_01420 PF11871 Domain of unknown function (DUF3391) C0L90_01420 PF01966 HD domain C0L90_01450 PF01494 FAD binding domain C0L90_01470 PF00111 2Fe-2S iron-sulfur cluster binding domain C0L90_01470 PF00175 Oxidoreductase NAD-binding domain C0L90_01475 PF00355 Rieske [2Fe-2S] domain C0L90_01480 PF01144 Coenzyme A transferase C0L90_01485 PF01144 Coenzyme A transferase C0L90_01490 PF00108 Thiolase, N-terminal domain C0L90_01490 PF02803 Thiolase, C-terminal domain C0L90_01495 PF00775 Dioxygenase C0L90_01495 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal C0L90_01510 PF00206 Lyase C0L90_01510 PF10397 Adenylosuccinate lyase C-terminus C0L90_01515 PF12146 Serine aminopeptidase, S33 C0L90_01520 PF02627 Carboxymuconolactone decarboxylase family C0L90_01535 PF09339 IclR helix-turn-helix domain C0L90_01535 PF01614 Bacterial transcriptional regulator C0L90_01560 PF13932 GidA associated domain C0L90_01560 PF01134 Glucose inhibited division protein A C0L90_01575 PF00291 Pyridoxal-phosphate dependent enzyme C0L90_01595 PF13649 Methyltransferase domain C0L90_01605 PF12697 Alpha/beta hydrolase family C0L90_01615 PF00155 Aminotransferase class I and II C0L90_01620 PF04055 Radical SAM superfamily C0L90_01620 PF06968 Biotin and Thiamin Synthesis associated domain C0L90_01630 PF01040 UbiA prenyltransferase family C0L90_01650 PF05819 NolX protein C0L90_01705 PF01313 Bacterial export proteins, family 3 C0L90_01710 PF00813 FliP family C0L90_01725 PF00771 FHIPEP family C0L90_01730 PF01312 FlhB HrpN YscU SpaS Family C0L90_01745 PF01514 Secretory protein of YscJ/FliF family C0L90_01760 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C0L90_01760 PF02874 ATP synthase alpha/beta family, beta-barrel domain C0L90_01760 PF18269 T3SS EscN ATPase C-terminal domain C0L90_01770 PF01311 Bacterial export proteins, family 1 C0L90_01785 PF01464 Transglycosylase SLT domain C0L90_01805 PF12794 Mechanosensitive ion channel inner membrane domain 1 C0L90_01805 PF12795 Mechanosensitive ion channel porin domain C0L90_01805 PF00924 Mechanosensitive ion channel C0L90_01815 PF05598 Transposase domain (DUF772) C0L90_01815 PF01609 Transposase DDE domain C0L90_01820 PF03109 ABC1 family C0L90_01830 PF05661 Protein of unknown function (DUF808) C0L90_01840 PF00072 Response regulator receiver domain C0L90_01840 PF00990 Diguanylate cyclase, GGDEF domain C0L90_01845 PF08323 Starch synthase catalytic domain C0L90_01845 PF00534 Glycosyl transferases group 1 C0L90_01850 PF00128 Alpha amylase, catalytic domain C0L90_01850 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C0L90_01850 PF02806 Alpha amylase, C-terminal all-beta domain C0L90_01855 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C0L90_01855 PF11941 Domain of unknown function (DUF3459) C0L90_01855 PF00128 Alpha amylase, catalytic domain C0L90_01860 PF02446 4-alpha-glucanotransferase C0L90_01865 PF00128 Alpha amylase, catalytic domain C0L90_01875 PF00128 Alpha amylase, catalytic domain C0L90_01875 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C0L90_01880 PF13460 NAD(P)H-binding C0L90_01885 PF05598 Transposase domain (DUF772) C0L90_01910 PF06903 VirK protein C0L90_01915 PF05598 Transposase domain (DUF772) C0L90_01920 PF05598 Transposase domain (DUF772) C0L90_01935 PF00271 Helicase conserved C-terminal domain C0L90_01935 PF00270 DEAD/DEAH box helicase C0L90_01945 PF05598 Transposase domain (DUF772) C0L90_01945 PF01609 Transposase DDE domain C0L90_01960 PF02817 e3 binding domain C0L90_01960 PF00364 Biotin-requiring enzyme C0L90_01960 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C0L90_01975 PF00676 Dehydrogenase E1 component C0L90_01985 PF03301 Tryptophan 2,3-dioxygenase C0L90_01990 PF00854 POT family C0L90_02000 PF01047 MarR family C0L90_02005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C0L90_02010 PF04209 homogentisate 1,2-dioxygenase C0L90_02020 PF03334 Na+/H+ antiporter subunit C0L90_02025 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) C0L90_02035 PF00361 Proton-conducting membrane transporter C0L90_02040 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C0L90_02045 PF00361 Proton-conducting membrane transporter C0L90_02045 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter C0L90_02045 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C0L90_02045 PF13244 Domain of unknown function (DUF4040) C0L90_02075 PF01259 SAICAR synthetase C0L90_02080 PF05099 Tellurite resistance protein TerB C0L90_02080 PF00226 DnaJ domain C0L90_02085 PF00834 Ribulose-phosphate 3 epimerase family C0L90_02090 PF00583 Acetyltransferase (GNAT) family C0L90_02095 PF00781 Diacylglycerol kinase catalytic domain C0L90_02100 PF04715 Anthranilate synthase component I, N terminal region C0L90_02100 PF00425 chorismate binding enzyme C0L90_02115 PF00117 Glutamine amidotransferase class-I C0L90_02130 PF00591 Glycosyl transferase family, a/b domain C0L90_02130 PF02885 Glycosyl transferase family, helical bundle domain C0L90_02135 PF00218 Indole-3-glycerol phosphate synthase C0L90_02145 PF00027 Cyclic nucleotide-binding domain C0L90_02145 PF00325 Bacterial regulatory proteins, crp family C0L90_02150 PF02675 S-adenosylmethionine decarboxylase C0L90_02155 PF00893 Small Multidrug Resistance protein C0L90_02160 PF03232 Ubiquinone biosynthesis protein COQ7 C0L90_02165 PF00572 Ribosomal protein L13 C0L90_02170 PF00380 Ribosomal protein S9/S16 C0L90_02185 PF00293 NUDIX domain C0L90_02190 PF04324 BFD-like [2Fe-2S] binding domain C0L90_02195 PF00210 Ferritin-like domain C0L90_02200 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C0L90_02200 PF00672 HAMP domain C0L90_02200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_02200 PF00512 His Kinase A (phospho-acceptor) domain C0L90_02200 PF01627 Hpt domain C0L90_02200 PF00072 Response regulator receiver domain C0L90_02205 PF00990 Diguanylate cyclase, GGDEF domain C0L90_02205 PF00563 EAL domain C0L90_02205 PF03707 Bacterial signalling protein N terminal repeat C0L90_02225 PF01521 Iron-sulphur cluster biosynthesis C0L90_02235 PF00293 NUDIX domain C0L90_02235 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain C0L90_02235 PF09297 NADH pyrophosphatase zinc ribbon domain C0L90_02240 PF03186 CobD/Cbib protein C0L90_02240 PF17113 Regulatory signalling modulator protein AmpE C0L90_02260 PF07690 Major Facilitator Superfamily C0L90_02270 PF07690 Major Facilitator Superfamily C0L90_02275 PF12805 FUSC-like inner membrane protein yccS C0L90_02285 PF02844 Phosphoribosylglycinamide synthetase, N domain C0L90_02285 PF02843 Phosphoribosylglycinamide synthetase, C domain C0L90_02285 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C0L90_02290 PF01808 AICARFT/IMPCHase bienzyme C0L90_02290 PF02142 MGS-like domain C0L90_02295 PF01066 CDP-alcohol phosphatidyltransferase C0L90_02305 PF02954 Bacterial regulatory protein, Fis family C0L90_02320 PF01381 Helix-turn-helix C0L90_02360 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C0L90_02360 PF02785 Biotin carboxylase C-terminal domain C0L90_02360 PF00289 Biotin carboxylase, N-terminal domain C0L90_02370 PF00364 Biotin-requiring enzyme C0L90_02375 PF01220 Dehydroquinase class II C0L90_02385 PF11412 Disulphide bond corrector protein DsbC C0L90_02385 PF02683 Cytochrome C biogenesis protein transmembrane region C0L90_02390 PF03091 CutA1 divalent ion tolerance protein C0L90_02410 PF18074 Primosomal protein N C-terminal domain C0L90_02410 PF17764 3′ DNA-binding domain (3′BD) C0L90_02410 PF00271 Helicase conserved C-terminal domain C0L90_02410 PF00270 DEAD/DEAH box helicase C0L90_02410 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C0L90_02430 PF01554 MatE C0L90_02435 PF01343 Peptidase family S49 C0L90_02460 PF01300 Telomere recombination C0L90_02465 PF13368 Topoisomerase C-terminal repeat C0L90_02465 PF01131 DNA topoisomerase C0L90_02465 PF01751 Toprim domain C0L90_02475 PF00114 Pilin (bacterial filament) C0L90_02475 PF07963 Prokaryotic N-terminal methylation motif C0L90_02480 PF04361 Protein of unknown function (DUF494) C0L90_02485 PF17782 DprA winged helix domain C0L90_02485 PF02481 DNA recombination-mediator protein A C0L90_02490 PF01476 LysM domain C0L90_02495 PF01327 Polypeptide deformylase C0L90_02500 PF02911 Formyl transferase, C-terminal domain C0L90_02500 PF00551 Formyl transferase C0L90_02505 PF01189 16S rRNA methyltransferase RsmB/F C0L90_02505 PF01029 NusB family C0L90_02520 PF00535 Glycosyl transferase family 2 C0L90_02540 PF00925 GTP cyclohydrolase II C0L90_02555 PF03279 Bacterial lipid A biosynthesis acyltransferase C0L90_02560 PF02580 D-Tyr-tRNA(Tyr) deacylase C0L90_02565 PF04546 Sigma-70, non-essential region C0L90_02565 PF00140 Sigma-70 factor, region 1.2 C0L90_02565 PF04542 Sigma-70 region 2 C0L90_02565 PF04539 Sigma-70 region 3 C0L90_02565 PF04545 Sigma-70, region 4 C0L90_02565 PF03979 Sigma-70 factor, region 1.1 C0L90_02595 PF07497 Rho termination factor, RNA-binding domain C0L90_02595 PF07498 Rho termination factor, N-terminal domain C0L90_02595 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C0L90_02600 PF00085 Thioredoxin C0L90_02605 PF12300 ATP-dependent RNA helicase RhlB C0L90_02605 PF00271 Helicase conserved C-terminal domain C0L90_02605 PF00270 DEAD/DEAH box helicase C0L90_02610 PF00005 ABC transporter C0L90_02615 PF18075 FtsX extracellular domain C0L90_02620 PF00072 Response regulator receiver domain C0L90_02625 PF03167 Uracil DNA glycosylase superfamily C0L90_02630 PF04545 Sigma-70, region 4 C0L90_02630 PF04542 Sigma-70 region 2 C0L90_02635 PF03458 UPF0126 domain C0L90_02640 PF07992 Pyridine nucleotide-disulphide oxidoreductase C0L90_02660 PF00166 Chaperonin 10 Kd subunit C0L90_02665 PF00118 TCP-1/cpn60 chaperonin family C0L90_02680 PF05598 Transposase domain (DUF772) C0L90_02680 PF01609 Transposase DDE domain C0L90_02690 PF05598 Transposase domain (DUF772) C0L90_02695 PF01609 Transposase DDE domain C0L90_02695 PF05598 Transposase domain (DUF772) C0L90_02705 PF00793 DAHP synthetase I family C0L90_02720 PF08450 SMP-30/Gluconolactonase/LRE-like region C0L90_02730 PF08335 GlnD PII-uridylyltransferase C0L90_02730 PF03710 Glutamate-ammonia ligase adenylyltransferase C0L90_02735 PF02592 Putative vitamin uptake transporter C0L90_02745 PF05598 Transposase domain (DUF772) C0L90_02775 PF00881 Nitroreductase family C0L90_02780 PF04264 YceI-like domain C0L90_02805 PF00456 Transketolase, thiamine diphosphate binding domain C0L90_02805 PF17831 Pyruvate dehydrogenase E1 component middle domain C0L90_02815 PF05598 Transposase domain (DUF772) C0L90_02825 PF05598 Transposase domain (DUF772) C0L90_02830 PF16671 Actin cross-linking domain C0L90_02830 PF04717 Type VI secretion system, phage-baseplate injector C0L90_02855 PF05598 Transposase domain (DUF772) C0L90_02880 PF03377 TAL effector repeat C0L90_02890 PF00106 short chain dehydrogenase C0L90_02930 PF07759 Protein of unknown function (DUF1615) C0L90_02945 PF00892 EamA-like transporter family C0L90_02950 PF03330 Lytic transglycolase C0L90_02955 PF00553 Cellulose binding domain C0L90_02955 PF00041 Fibronectin type III domain C0L90_02955 PF01341 Glycosyl hydrolases family 6 C0L90_02965 PF00324 Amino acid permease C0L90_02975 PF01544 CorA-like Mg2+ transporter protein C0L90_03010 PF05598 Transposase domain (DUF772) C0L90_03020 PF01204 Trehalase C0L90_03055 PF00563 EAL domain C0L90_03055 PF00990 Diguanylate cyclase, GGDEF domain C0L90_03055 PF03707 Bacterial signalling protein N terminal repeat C0L90_03055 PF13188 PAS domain C0L90_03080 PF00553 Cellulose binding domain C0L90_03080 PF00150 Cellulase (glycosyl hydrolase family 5) C0L90_03085 PF01740 STAS domain C0L90_03085 PF00916 Sulfate permease family C0L90_03090 PF08448 PAS fold C0L90_03090 PF00990 Diguanylate cyclase, GGDEF domain C0L90_03110 PF13632 Glycosyl transferase family group 2 C0L90_03120 PF07694 5TMR of 5TMR-LYT C0L90_03120 PF06580 Histidine kinase C0L90_03125 PF04397 LytTr DNA-binding domain C0L90_03125 PF00072 Response regulator receiver domain C0L90_03130 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C0L90_03130 PF03900 Porphobilinogen deaminase, C-terminal domain C0L90_03155 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C0L90_03155 PF00326 Prolyl oligopeptidase family C0L90_03165 PF00155 Aminotransferase class I and II C0L90_03170 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C0L90_03170 PF00326 Prolyl oligopeptidase family C0L90_03175 PF04304 Protein of unknown function (DUF454) C0L90_03185 PF01678 Diaminopimelate epimerase C0L90_03195 PF02899 Phage integrase, N-terminal SAM-like domain C0L90_03195 PF00589 Phage integrase family C0L90_03205 PF00227 Proteasome subunit C0L90_03210 PF07724 AAA domain (Cdc48 subfamily) C0L90_03210 PF00004 ATPase family associated with various cellular activities (AAA) C0L90_03210 PF10431 C-terminal, D2-small domain, of ClpB protein C0L90_03220 PF13673 Acetyltransferase (GNAT) domain C0L90_03235 PF01209 ubiE/COQ5 methyltransferase family C0L90_03240 PF00563 EAL domain C0L90_03240 PF03707 Bacterial signalling protein N terminal repeat C0L90_03240 PF00990 Diguanylate cyclase, GGDEF domain C0L90_03245 PF11838 ERAP1-like C-terminal domain C0L90_03245 PF01433 Peptidase family M1 domain C0L90_03260 PF00294 pfkB family carbohydrate kinase C0L90_03270 PF04085 rod shape-determining protein MreC C0L90_03280 PF03717 Penicillin-binding Protein dimerisation domain C0L90_03280 PF00905 Penicillin binding protein transpeptidase domain C0L90_03285 PF01098 Cell cycle protein C0L90_03305 PF00295 Glycosyl hydrolases family 28 C0L90_03310 PF13406 Transglycosylase SLT domain C0L90_03315 PF05036 Sporulation related domain C0L90_03315 PF03330 Lytic transglycolase C0L90_03320 PF07943 Penicillin-binding protein 5, C-terminal domain C0L90_03320 PF00768 D-alanyl-D-alanine carboxypeptidase C0L90_03335 PF04359 Protein of unknown function (DUF493) C0L90_03340 PF03099 Biotin/lipoate A/B protein ligase family C0L90_03345 PF04055 Radical SAM superfamily C0L90_03345 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family C0L90_03350 PF11818 C-terminal domain of tail specific protease (DUF3340) C0L90_03350 PF00595 PDZ domain C0L90_03350 PF17804 Tail specific protease N-terminal domain C0L90_03350 PF03572 Peptidase family S41 C0L90_03360 PF01467 Cytidylyltransferase-like C0L90_03360 PF00293 NUDIX domain C0L90_03395 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C0L90_03395 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain C0L90_03400 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C0L90_03400 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C0L90_03405 PF04972 BON domain C0L90_03410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_03410 PF00512 His Kinase A (phospho-acceptor) domain C0L90_03410 PF08446 PAS fold C0L90_03410 PF00360 Phytochrome region C0L90_03410 PF01590 GAF domain C0L90_03415 PF00072 Response regulator receiver domain C0L90_03420 PF00512 His Kinase A (phospho-acceptor) domain C0L90_03420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_03425 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C0L90_03450 PF01609 Transposase DDE domain C0L90_03450 PF05598 Transposase domain (DUF772) C0L90_03465 PF16355 Domain of unknown function (DUF4982) C0L90_03465 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 C0L90_03465 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C0L90_03465 PF02837 Glycosyl hydrolases family 2, sugar binding domain C0L90_03465 PF00703 Glycosyl hydrolases family 2 C0L90_03485 PF07690 Major Facilitator Superfamily C0L90_03490 PF00356 Bacterial regulatory proteins, lacI family C0L90_03495 PF01380 SIS domain C0L90_03500 PF01979 Amidohydrolase family C0L90_03515 PF00535 Glycosyl transferase family 2 C0L90_03520 PF14883 Hypothetical glycosyl hydrolase family 13 C0L90_03520 PF01522 Polysaccharide deacetylase C0L90_03535 PF01743 Poly A polymerase head domain C0L90_03535 PF01966 HD domain C0L90_03535 PF12627 Probable RNA and SrmB- binding site of polymerase A C0L90_03540 PF01609 Transposase DDE domain C0L90_03540 PF05598 Transposase domain (DUF772) C0L90_03580 PF00034 Cytochrome c C0L90_03585 PF01926 50S ribosome-binding GTPase C0L90_03595 PF04107 Glutamate-cysteine ligase family 2(GCS2) C0L90_03625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_03625 PF16527 Two-component sensor protein CpxA, periplasmic domain C0L90_03625 PF00672 HAMP domain C0L90_03625 PF00512 His Kinase A (phospho-acceptor) domain C0L90_03630 PF00486 Transcriptional regulatory protein, C terminal C0L90_03630 PF00072 Response regulator receiver domain C0L90_03645 PF02583 Metal-sensitive transcriptional repressor C0L90_03650 PF08240 Alcohol dehydrogenase GroES-like domain C0L90_03650 PF00107 Zinc-binding dehydrogenase C0L90_03655 PF04828 Glutathione-dependent formaldehyde-activating enzyme C0L90_03660 PF00756 Putative esterase C0L90_03670 PF05598 Transposase domain (DUF772) C0L90_03670 PF01609 Transposase DDE domain C0L90_03685 PF12848 ABC transporter C0L90_03685 PF00005 ABC transporter C0L90_03705 PF00464 Serine hydroxymethyltransferase C0L90_03715 PF03477 ATP cone domain C0L90_03725 PF01872 RibD C-terminal domain C0L90_03725 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C0L90_03735 PF00677 Lumazine binding domain C0L90_03740 PF00925 GTP cyclohydrolase II C0L90_03740 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C0L90_03745 PF00885 6,7-dimethyl-8-ribityllumazine synthase C0L90_03750 PF01029 NusB family C0L90_03755 PF02769 AIR synthase related protein, C-terminal domain C0L90_03755 PF00586 AIR synthase related protein, N-terminal domain C0L90_03780 PF03814 Potassium-transporting ATPase A subunit C0L90_03790 PF02669 K+-transporting ATPase, c chain C0L90_03795 PF13493 Domain of unknown function (DUF4118) C0L90_03795 PF02702 Osmosensitive K+ channel His kinase sensor domain C0L90_03795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_03795 PF13492 GAF domain C0L90_03795 PF00512 His Kinase A (phospho-acceptor) domain C0L90_03800 PF00486 Transcriptional regulatory protein, C terminal C0L90_03800 PF00072 Response regulator receiver domain C0L90_03830 PF02913 FAD linked oxidases, C-terminal domain C0L90_03830 PF01565 FAD binding domain C0L90_03840 PF02021 Uncharacterised protein family UPF0102 C0L90_03850 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C0L90_03875 PF02381 MraZ protein, putative antitoxin-like C0L90_03880 PF01795 MraW methylase family C0L90_03885 PF04999 Cell division protein FtsL C0L90_03890 PF03717 Penicillin-binding Protein dimerisation domain C0L90_03890 PF00905 Penicillin binding protein transpeptidase domain C0L90_03895 PF02875 Mur ligase family, glutamate ligase domain C0L90_03895 PF01225 Mur ligase family, catalytic domain C0L90_03895 PF08245 Mur ligase middle domain C0L90_03900 PF01225 Mur ligase family, catalytic domain C0L90_03900 PF08245 Mur ligase middle domain C0L90_03900 PF02875 Mur ligase family, glutamate ligase domain C0L90_03905 PF00953 Glycosyl transferase family 4 C0L90_03910 PF01098 Cell cycle protein C0L90_03915 PF03033 Glycosyltransferase family 28 N-terminal domain C0L90_03915 PF04101 Glycosyltransferase family 28 C-terminal domain C0L90_03920 PF01225 Mur ligase family, catalytic domain C0L90_03920 PF02875 Mur ligase family, glutamate ligase domain C0L90_03920 PF08245 Mur ligase middle domain C0L90_03925 PF07478 D-ala D-ala ligase C-terminus C0L90_03925 PF01820 D-ala D-ala ligase N-terminus C0L90_03930 PF03799 Cell division protein FtsQ C0L90_03930 PF08478 POTRA domain, FtsQ-type C0L90_03935 PF02491 SHS2 domain inserted in FTSA C0L90_03940 PF00091 Tubulin/FtsZ family, GTPase domain C0L90_03940 PF12327 FtsZ family, C-terminal domain C0L90_03945 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C0L90_03955 PF01551 Peptidase family M23 C0L90_03955 PF10145 Phage-related minor tail protein C0L90_03955 PF01464 Transglycosylase SLT domain C0L90_03960 PF01043 SecA preprotein cross-linking domain C0L90_03960 PF07517 SecA DEAD-like domain C0L90_03960 PF07516 SecA Wing and Scaffold domain C0L90_03960 PF02810 SEC-C motif C0L90_03970 PF00293 NUDIX domain C0L90_03985 PF02219 Methylenetetrahydrofolate reductase C0L90_04000 PF00550 Phosphopantetheine attachment site C0L90_04000 PF14765 Polyketide synthase dehydratase C0L90_04000 PF00698 Acyl transferase domain C0L90_04000 PF08240 Alcohol dehydrogenase GroES-like domain C0L90_04000 PF00107 Zinc-binding dehydrogenase C0L90_04000 PF16197 Ketoacyl-synthetase C-terminal extension C0L90_04000 PF00109 Beta-ketoacyl synthase, N-terminal domain C0L90_04000 PF08659 KR domain C0L90_04000 PF02801 Beta-ketoacyl synthase, C-terminal domain C0L90_04005 PF00082 Subtilase family C0L90_04005 PF09286 Pro-kumamolisin, activation domain C0L90_04025 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C0L90_04060 PF13649 Methyltransferase domain C0L90_04065 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C0L90_04065 PF05221 S-adenosyl-L-homocysteine hydrolase C0L90_04075 PF00311 Phosphoenolpyruvate carboxylase C0L90_04090 PF13936 Helix-turn-helix domain C0L90_04090 PF00665 Integrase core domain C0L90_04110 PF00328 Histidine phosphatase superfamily (branch 2) C0L90_04115 PF02772 S-adenosylmethionine synthetase, central domain C0L90_04115 PF00438 S-adenosylmethionine synthetase, N-terminal domain C0L90_04115 PF02773 S-adenosylmethionine synthetase, C-terminal domain C0L90_04130 PF01207 Dihydrouridine synthase (Dus) C0L90_04140 PF00294 pfkB family carbohydrate kinase C0L90_04145 PF07670 Nucleoside recognition C0L90_04145 PF07662 Na+ dependent nucleoside transporter C-terminus C0L90_04145 PF01773 Na+ dependent nucleoside transporter N-terminus C0L90_04155 PF00248 Aldo/keto reductase family C0L90_04185 PF00005 ABC transporter C0L90_04195 PF02668 Taurine catabolism dioxygenase TauD, TfdA family C0L90_04205 PF00005 ABC transporter C0L90_04210 PF13472 GDSL-like Lipase/Acylhydrolase family C0L90_04215 PF00072 Response regulator receiver domain C0L90_04215 PF00486 Transcriptional regulatory protein, C terminal C0L90_04220 PF08521 Two-component sensor kinase N-terminal C0L90_04220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_04220 PF00512 His Kinase A (phospho-acceptor) domain C0L90_04235 PF01219 Prokaryotic diacylglycerol kinase C0L90_04255 PF01790 Prolipoprotein diacylglyceryl transferase C0L90_04260 PF00303 Thymidylate synthase C0L90_04270 PF00186 Dihydrofolate reductase C0L90_04275 PF00149 Calcineurin-like phosphoesterase C0L90_04280 PF04379 ApaG domain C0L90_04285 PF00398 Ribosomal RNA adenine dimethylase C0L90_04290 PF05598 Transposase domain (DUF772) C0L90_04300 PF04166 Pyridoxal phosphate biosynthetic protein PdxA C0L90_04305 PF09312 SurA N-terminal domain C0L90_04305 PF00639 PPIC-type PPIASE domain C0L90_04310 PF03968 OstA-like protein C0L90_04310 PF04453 LPS transport system D C0L90_04315 PF00850 Histone deacetylase domain C0L90_04320 PF01923 Cobalamin adenosyltransferase C0L90_04335 PF01494 FAD binding domain C0L90_04340 PF01494 FAD binding domain C0L90_04360 PF07729 FCD domain C0L90_04360 PF00392 Bacterial regulatory proteins, gntR family C0L90_04365 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C0L90_04370 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C0L90_04370 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit C0L90_04375 PF03466 LysR substrate binding domain C0L90_04375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L90_04380 PF13193 AMP-binding enzyme C-terminal domain C0L90_04380 PF00501 AMP-binding enzyme C0L90_04385 PF00171 Aldehyde dehydrogenase family C0L90_04390 PF00378 Enoyl-CoA hydratase/isomerase C0L90_04410 PF08450 SMP-30/Gluconolactonase/LRE-like region C0L90_04415 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C0L90_04415 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C0L90_04420 PF01728 FtsJ-like methyltransferase C0L90_04420 PF18125 RlmM ferredoxin-like domain C0L90_04450 PF00749 tRNA synthetases class I (E and Q), catalytic domain C0L90_04450 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain C0L90_04460 PF00196 Bacterial regulatory proteins, luxR family C0L90_04460 PF00072 Response regulator receiver domain C0L90_04470 PF01625 Peptide methionine sulfoxide reductase C0L90_04475 PF00923 Transaldolase/Fructose-6-phosphate aldolase C0L90_04480 PF01272 Transcription elongation factor, GreA/GreB, C-term C0L90_04480 PF03449 Transcription elongation factor, N-terminal C0L90_04490 PF03466 LysR substrate binding domain C0L90_04490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L90_04495 PF13192 Thioredoxin domain C0L90_04495 PF07992 Pyridine nucleotide-disulphide oxidoreductase C0L90_04500 PF00578 AhpC/TSA family C0L90_04500 PF10417 C-terminal domain of 1-Cys peroxiredoxin C0L90_04505 PF17827 PrmC N-terminal domain C0L90_04505 PF05175 Methyltransferase small domain C0L90_04530 PF00561 alpha/beta hydrolase fold C0L90_04540 PF00293 NUDIX domain C0L90_04545 PF01367 5'-3' exonuclease, C-terminal SAM fold C0L90_04545 PF01612 3'-5' exonuclease C0L90_04545 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C0L90_04545 PF00476 DNA polymerase family A C0L90_04560 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C0L90_04560 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch C0L90_04560 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C0L90_04585 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch C0L90_04590 PF02233 NAD(P) transhydrogenase beta subunit C0L90_04615 PF01063 Amino-transferase class IV C0L90_04625 PF04073 Aminoacyl-tRNA editing domain C0L90_04635 PF17189 Glycosyl hydrolase family 30 beta sandwich domain C0L90_04635 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain C0L90_04650 PF03358 NADPH-dependent FMN reductase C0L90_04655 PF03631 Virulence factor BrkB C0L90_04660 PF08534 Redoxin C0L90_04665 PF00708 Acylphosphatase C0L90_04675 PF03976 Polyphosphate kinase 2 (PPK2) C0L90_04680 PF00994 Probable molybdopterin binding domain C0L90_04690 PF03462 PCRF domain C0L90_04690 PF00472 RF-1 domain C0L90_04695 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C0L90_04695 PF01488 Shikimate / quinate 5-dehydrogenase C0L90_04695 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain C0L90_04705 PF03550 Outer membrane lipoprotein LolB C0L90_04710 PF08544 GHMP kinases C terminal C0L90_04710 PF00288 GHMP kinases N terminal domain C0L90_04720 PF14572 Phosphoribosyl synthetase-associated domain C0L90_04720 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C0L90_04725 PF01386 Ribosomal L25p family C0L90_04725 PF14693 Ribosomal protein TL5, C-terminal domain C0L90_04730 PF01195 Peptidyl-tRNA hydrolase C0L90_04735 PF01926 50S ribosome-binding GTPase C0L90_04735 PF06071 Protein of unknown function (DUF933) C0L90_04755 PF03143 Elongation factor Tu C-terminal domain C0L90_04755 PF03144 Elongation factor Tu domain 2 C0L90_04755 PF00009 Elongation factor Tu GTP binding domain C0L90_04765 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C0L90_04770 PF02357 Transcription termination factor nusG C0L90_04770 PF00467 KOW motif C0L90_04780 PF00298 Ribosomal protein L11, RNA binding domain C0L90_04780 PF03946 Ribosomal protein L11, N-terminal domain C0L90_04785 PF00687 Ribosomal protein L1p/L10e family C0L90_04790 PF00466 Ribosomal protein L10 C0L90_04795 PF16320 Ribosomal protein L7/L12 dimerisation domain C0L90_04795 PF00542 Ribosomal protein L7/L12 C-terminal domain C0L90_04800 PF04560 RNA polymerase Rpb2, domain 7 C0L90_04800 PF04561 RNA polymerase Rpb2, domain 2 C0L90_04800 PF04565 RNA polymerase Rpb2, domain 3 C0L90_04800 PF00562 RNA polymerase Rpb2, domain 6 C0L90_04800 PF04563 RNA polymerase beta subunit C0L90_04800 PF10385 RNA polymerase beta subunit external 1 domain C0L90_04805 PF04983 RNA polymerase Rpb1, domain 3 C0L90_04805 PF04998 RNA polymerase Rpb1, domain 5 C0L90_04805 PF05000 RNA polymerase Rpb1, domain 4 C0L90_04805 PF04997 RNA polymerase Rpb1, domain 1 C0L90_04805 PF00623 RNA polymerase Rpb1, domain 2 C0L90_04810 PF00164 Ribosomal protein S12/S23 C0L90_04815 PF00177 Ribosomal protein S7p/S5e C0L90_04820 PF03764 Elongation factor G, domain IV C0L90_04820 PF00679 Elongation factor G C-terminus C0L90_04820 PF03144 Elongation factor Tu domain 2 C0L90_04820 PF14492 Elongation Factor G, domain II C0L90_04820 PF00009 Elongation factor Tu GTP binding domain C0L90_04825 PF03143 Elongation factor Tu C-terminal domain C0L90_04825 PF03144 Elongation factor Tu domain 2 C0L90_04825 PF00009 Elongation factor Tu GTP binding domain C0L90_04835 PF00338 Ribosomal protein S10p/S20e C0L90_04840 PF00297 Ribosomal protein L3 C0L90_04845 PF00573 Ribosomal protein L4/L1 family C0L90_04850 PF00276 Ribosomal protein L23 C0L90_04855 PF03947 Ribosomal Proteins L2, C-terminal domain C0L90_04855 PF00181 Ribosomal Proteins L2, RNA binding domain C0L90_04860 PF00203 Ribosomal protein S19 C0L90_04865 PF00237 Ribosomal protein L22p/L17e C0L90_04870 PF00189 Ribosomal protein S3, C-terminal domain C0L90_04870 PF07650 KH domain C0L90_04875 PF00252 Ribosomal protein L16p/L10e C0L90_04880 PF00831 Ribosomal L29 protein C0L90_04885 PF00366 Ribosomal protein S17 C0L90_04890 PF00238 Ribosomal protein L14p/L23e C0L90_04895 PF00467 KOW motif C0L90_04895 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C0L90_04900 PF00673 ribosomal L5P family C-terminus C0L90_04900 PF00281 Ribosomal protein L5 C0L90_04905 PF00253 Ribosomal protein S14p/S29e C0L90_04910 PF00410 Ribosomal protein S8 C0L90_04915 PF00347 Ribosomal protein L6 C0L90_04920 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C0L90_04925 PF00333 Ribosomal protein S5, N-terminal domain C0L90_04925 PF03719 Ribosomal protein S5, C-terminal domain C0L90_04930 PF00327 Ribosomal protein L30p/L7e C0L90_04935 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C0L90_04940 PF00344 SecY translocase C0L90_04945 PF00416 Ribosomal protein S13/S18 C0L90_04950 PF00411 Ribosomal protein S11 C0L90_04955 PF01479 S4 domain C0L90_04955 PF00163 Ribosomal protein S4/S9 N-terminal domain C0L90_04960 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C0L90_04960 PF01000 RNA polymerase Rpb3/RpoA insert domain C0L90_04960 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C0L90_04965 PF01196 Ribosomal protein L17 C0L90_04970 PF02600 Disulfide bond formation protein DsbB C0L90_04980 PF01474 Class-II DAHP synthetase family C0L90_05005 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C0L90_05010 PF00056 lactate/malate dehydrogenase, NAD binding domain C0L90_05010 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C0L90_05015 PF00043 Glutathione S-transferase, C-terminal domain C0L90_05015 PF02798 Glutathione S-transferase, N-terminal domain C0L90_05045 PF01609 Transposase DDE domain C0L90_05045 PF05598 Transposase domain (DUF772) C0L90_05065 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C0L90_05065 PF07992 Pyridine nucleotide-disulphide oxidoreductase C0L90_05070 PF08240 Alcohol dehydrogenase GroES-like domain C0L90_05070 PF00107 Zinc-binding dehydrogenase C0L90_05080 PF00691 OmpA family C0L90_05080 PF05736 OprF membrane domain C0L90_05090 PF00849 RNA pseudouridylate synthase C0L90_05100 PF00155 Aminotransferase class I and II C0L90_05110 PF00528 Binding-protein-dependent transport system inner membrane component C0L90_05115 PF00528 Binding-protein-dependent transport system inner membrane component C0L90_05120 PF12857 TOBE-like domain C0L90_05120 PF00005 ABC transporter C0L90_05120 PF17850 CysA C-terminal regulatory domain C0L90_05130 PF00107 Zinc-binding dehydrogenase C0L90_05130 PF08240 Alcohol dehydrogenase GroES-like domain C0L90_05150 PF10459 Peptidase S46 C0L90_05155 PF00300 Histidine phosphatase superfamily (branch 1) C0L90_05165 PF02875 Mur ligase family, glutamate ligase domain C0L90_05165 PF08245 Mur ligase middle domain C0L90_05180 PF00156 Phosphoribosyl transferase domain C0L90_05185 PF04305 Protein of unknown function (DUF455) C0L90_05210 PF00149 Calcineurin-like phosphoesterase C0L90_05215 PF01569 PAP2 superfamily C0L90_05220 PF00534 Glycosyl transferases group 1 C0L90_05220 PF13439 Glycosyltransferase Family 4 C0L90_05225 PF02541 Ppx/GppA phosphatase family C0L90_05230 PF02503 Polyphosphate kinase middle domain C0L90_05230 PF13090 Polyphosphate kinase C-terminal domain 2 C0L90_05230 PF17941 Polyphosphate kinase C-terminal domain 1 C0L90_05230 PF13089 Polyphosphate kinase N-terminal domain C0L90_05235 PF00512 His Kinase A (phospho-acceptor) domain C0L90_05235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_05235 PF00989 PAS fold C0L90_05235 PF11808 Phosphate regulon sensor protein PhoR C0L90_05240 PF00072 Response regulator receiver domain C0L90_05240 PF00486 Transcriptional regulatory protein, C terminal C0L90_05245 PF13181 Tetratricopeptide repeat C0L90_05245 PF01435 Peptidase family M48 C0L90_05250 PF00462 Glutaredoxin C0L90_05260 PF18324 Hypothetical protein TT1725 C0L90_05260 PF00180 Isocitrate/isopropylmalate dehydrogenase C0L90_05300 PF01609 Transposase DDE domain C0L90_05300 PF05598 Transposase domain (DUF772) C0L90_05325 PF05698 Bacterial trigger factor protein (TF) C-terminus C0L90_05325 PF05697 Bacterial trigger factor protein (TF) C0L90_05330 PF00574 Clp protease C0L90_05335 PF10431 C-terminal, D2-small domain, of ClpB protein C0L90_05335 PF06689 ClpX C4-type zinc finger C0L90_05335 PF07724 AAA domain (Cdc48 subfamily) C0L90_05340 PF00004 ATPase family associated with various cellular activities (AAA) C0L90_05340 PF05362 Lon protease (S16) C-terminal proteolytic domain C0L90_05340 PF02190 ATP-dependent protease La (LON) substrate-binding domain C0L90_05345 PF00216 Bacterial DNA-binding protein C0L90_05370 PF01476 LysM domain C0L90_05370 PF05257 CHAP domain C0L90_05375 PF16123 Hydroxyacylglutathione hydrolase C-terminus C0L90_05375 PF00753 Metallo-beta-lactamase superfamily C0L90_05385 PF00075 RNase H C0L90_05390 PF00929 Exonuclease C0L90_05400 PF05598 Transposase domain (DUF772) C0L90_05425 PF05598 Transposase domain (DUF772) C0L90_05425 PF01609 Transposase DDE domain C0L90_05435 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C0L90_05445 PF00753 Metallo-beta-lactamase superfamily C0L90_05445 PF12706 Beta-lactamase superfamily domain C0L90_05450 PF06463 Molybdenum Cofactor Synthesis C C0L90_05450 PF04055 Radical SAM superfamily C0L90_05460 PF01967 MoaC family C0L90_05465 PF02597 ThiS family C0L90_05470 PF02391 MoaE protein C0L90_05500 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding C0L90_05500 PF12170 DNA polymerase III tau subunit V interacting with alpha C0L90_05500 PF12169 DNA polymerase III subunits gamma and tau domain III C0L90_05505 PF02575 YbaB/EbfC DNA-binding family C0L90_05510 PF13662 Toprim domain C0L90_05510 PF02132 RecR protein C0L90_05515 PF01230 HIT domain C0L90_05525 PF13559 Domain of unknown function (DUF4129) C0L90_05525 PF01841 Transglutaminase-like superfamily C0L90_05525 PF11992 Domain of unknown function (DUF3488) C0L90_05535 PF17863 AAA lid domain C0L90_05535 PF07726 ATPase family associated with various cellular activities (AAA) C0L90_05550 PF02545 Maf-like protein C0L90_05555 PF02620 Large ribosomal RNA subunit accumulation protein YceD C0L90_05560 PF01783 Ribosomal L32p protein family C0L90_05565 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C0L90_05565 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C0L90_05575 PF00698 Acyl transferase domain C0L90_05585 PF00550 Phosphopantetheine attachment site C0L90_05590 PF02801 Beta-ketoacyl synthase, C-terminal domain C0L90_05590 PF00109 Beta-ketoacyl synthase, N-terminal domain C0L90_05595 PF04715 Anthranilate synthase component I, N terminal region C0L90_05595 PF00425 chorismate binding enzyme C0L90_05600 PF02618 YceG-like family C0L90_05605 PF09115 DNA polymerase III, delta subunit, C terminal C0L90_05620 PF05598 Transposase domain (DUF772) C0L90_05635 PF02954 Bacterial regulatory protein, Fis family C0L90_05635 PF06506 Propionate catabolism activator C0L90_05635 PF00158 Sigma-54 interaction domain C0L90_05645 PF00285 Citrate synthase, C-terminal domain C0L90_05655 PF00330 Aconitase family (aconitate hydratase) C0L90_05655 PF00694 Aconitase C-terminal domain C0L90_05670 PF05598 Transposase domain (DUF772) C0L90_05670 PF01609 Transposase DDE domain C0L90_05675 PF04303 PrpF protein C0L90_05680 PF07715 TonB-dependent Receptor Plug Domain C0L90_05680 PF00593 TonB dependent receptor C0L90_05730 PF01556 DnaJ C terminal domain C0L90_05730 PF00226 DnaJ domain C0L90_05735 PF00072 Response regulator receiver domain C0L90_05745 PF12221 Bacterial membrane protein N terminal C0L90_05745 PF01145 SPFH domain / Band 7 family C0L90_05750 PF01145 SPFH domain / Band 7 family C0L90_05760 PF00709 Adenylosuccinate synthetase C0L90_05765 PF01433 Peptidase family M1 domain C0L90_05765 PF11838 ERAP1-like C-terminal domain C0L90_05790 PF02384 N-6 DNA Methylase C0L90_05800 PF00271 Helicase conserved C-terminal domain C0L90_05800 PF08463 EcoEI R protein C-terminal C0L90_05800 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C0L90_05800 PF04851 Type III restriction enzyme, res subunit C0L90_05840 PF00300 Histidine phosphatase superfamily (branch 1) C0L90_05840 PF13456 Reverse transcriptase-like C0L90_05870 PF00717 Peptidase S24-like C0L90_05870 PF01726 LexA DNA binding domain C0L90_05885 PF14579 Helix-hairpin-helix motif C0L90_05885 PF07733 Bacterial DNA polymerase III alpha NTPase domain C0L90_05885 PF02811 PHP domain C0L90_05885 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C0L90_05905 PF03169 OPT oligopeptide transporter protein C0L90_05920 PF07676 WD40-like Beta Propeller Repeat C0L90_05920 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region C0L90_05920 PF00326 Prolyl oligopeptidase family C0L90_05930 PF12833 Helix-turn-helix domain C0L90_05930 PF02311 AraC-like ligand binding domain C0L90_05975 PF18011 C-terminal domain found in long catalases C0L90_05975 PF06628 Catalase-related immune-responsive C0L90_05975 PF00199 Catalase C0L90_06005 PF02347 Glycine cleavage system P-protein C0L90_06045 PF00884 Sulfatase C0L90_06045 PF08019 Phosphoethanolamine transferase EptA/EptB C0L90_06055 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase C0L90_06060 PF00486 Transcriptional regulatory protein, C terminal C0L90_06060 PF00072 Response regulator receiver domain C0L90_06065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_06065 PF00512 His Kinase A (phospho-acceptor) domain C0L90_06065 PF08521 Two-component sensor kinase N-terminal C0L90_06075 PF03776 Septum formation topological specificity factor MinE C0L90_06080 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C0L90_06085 PF05209 Septum formation inhibitor MinC, N-terminal domain C0L90_06085 PF03775 Septum formation inhibitor MinC, C-terminal domain C0L90_06095 PF07730 Histidine kinase C0L90_06100 PF00072 Response regulator receiver domain C0L90_06100 PF00196 Bacterial regulatory proteins, luxR family C0L90_06115 PF00730 HhH-GPD superfamily base excision DNA repair protein C0L90_06140 PF02222 ATP-grasp domain C0L90_06185 PF00691 OmpA family C0L90_06185 PF04972 BON domain C0L90_06205 PF04717 Type VI secretion system, phage-baseplate injector C0L90_06215 PF00665 Integrase core domain C0L90_06215 PF13936 Helix-turn-helix domain C0L90_06225 PF05598 Transposase domain (DUF772) C0L90_06230 PF05598 Transposase domain (DUF772) C0L90_06240 PF01609 Transposase DDE domain C0L90_06240 PF05598 Transposase domain (DUF772) C0L90_06265 PF05598 Transposase domain (DUF772) C0L90_06345 PF10431 C-terminal, D2-small domain, of ClpB protein C0L90_06345 PF07724 AAA domain (Cdc48 subfamily) C0L90_06345 PF17871 AAA lid domain C0L90_06345 PF00004 ATPase family associated with various cellular activities (AAA) C0L90_06355 PF16671 Actin cross-linking domain C0L90_06355 PF04717 Type VI secretion system, phage-baseplate injector C0L90_06390 PF01208 Uroporphyrinogen decarboxylase (URO-D) C0L90_06400 PF01761 3-dehydroquinate synthase C0L90_06405 PF01202 Shikimate kinase C0L90_06410 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region C0L90_06410 PF01243 Pyridoxamine 5'-phosphate oxidase C0L90_06420 PF04012 PspA/IM30 family C0L90_06445 PF03738 Glutathionylspermidine synthase preATP-grasp C0L90_06500 PF12706 Beta-lactamase superfamily domain C0L90_06510 PF05598 Transposase domain (DUF772) C0L90_06525 PF00324 Amino acid permease C0L90_06530 PF00196 Bacterial regulatory proteins, luxR family C0L90_06535 PF00561 alpha/beta hydrolase fold C0L90_06545 PF00324 Amino acid permease C0L90_06570 PF00145 C-5 cytosine-specific DNA methylase C0L90_06575 PF01609 Transposase DDE domain C0L90_06575 PF05598 Transposase domain (DUF772) C0L90_06585 PF02322 Cytochrome bd terminal oxidase subunit II C0L90_06590 PF00756 Putative esterase C0L90_06595 PF01769 Divalent cation transporter C0L90_06595 PF03448 MgtE intracellular N domain C0L90_06595 PF00571 CBS domain C0L90_06605 PF00391 PEP-utilising enzyme, mobile domain C0L90_06605 PF05524 PEP-utilising enzyme, N-terminal C0L90_06605 PF02896 PEP-utilising enzyme, TIM barrel domain C0L90_06610 PF00381 PTS HPr component phosphorylation site C0L90_06625 PF05598 Transposase domain (DUF772) C0L90_06625 PF01609 Transposase DDE domain C0L90_06640 PF03668 P-loop ATPase protein family C0L90_06645 PF02603 HPr Serine kinase N terminus C0L90_06645 PF07475 HPr Serine kinase C-terminal domain C0L90_06650 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C0L90_06655 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C0L90_06660 PF04963 Sigma-54 factor, core binding domain C0L90_06660 PF04552 Sigma-54, DNA binding domain C0L90_06660 PF00309 Sigma-54 factor, Activator interacting domain (AID) C0L90_06665 PF00005 ABC transporter C0L90_06670 PF03968 OstA-like protein C0L90_06685 PF01380 SIS domain C0L90_06685 PF00571 CBS domain C0L90_06690 PF01722 BolA-like protein C0L90_06695 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C0L90_06720 PF00551 Formyl transferase C0L90_06735 PF02769 AIR synthase related protein, C-terminal domain C0L90_06735 PF00586 AIR synthase related protein, N-terminal domain C0L90_06745 PF01594 AI-2E family transporter C0L90_06750 PF00308 Bacterial dnaA protein C0L90_06755 PF00483 Nucleotidyl transferase C0L90_06760 PF01636 Phosphotransferase enzyme family C0L90_06770 PF01546 Peptidase family M20/M25/M40 C0L90_06770 PF07687 Peptidase dimerisation domain C0L90_06795 PF01609 Transposase DDE domain C0L90_06795 PF05598 Transposase domain (DUF772) C0L90_06805 PF00355 Rieske [2Fe-2S] domain C0L90_06815 PF00266 Aminotransferase class-V C0L90_06820 PF01458 Uncharacterized protein family (UPF0051) C0L90_06825 PF00005 ABC transporter C0L90_06830 PF01458 Uncharacterized protein family (UPF0051) C0L90_06835 PF02082 Transcriptional regulator C0L90_06885 PF03807 NADP oxidoreductase coenzyme F420-dependent C0L90_06885 PF14748 Pyrroline-5-carboxylate reductase dimerisation C0L90_06890 PF01168 Alanine racemase, N-terminal domain C0L90_06900 PF00437 Type II/IV secretion system protein C0L90_06905 PF00437 Type II/IV secretion system protein C0L90_06925 PF00117 Glutamine amidotransferase class-I C0L90_06925 PF03352 Methyladenine glycosylase C0L90_06925 PF00958 GMP synthase C terminal domain C0L90_06925 PF13302 Acetyltransferase (GNAT) domain C0L90_06925 PF13673 Acetyltransferase (GNAT) domain C0L90_06940 PF02622 Uncharacterized ACR, COG1678 C0L90_06945 PF03652 Holliday junction resolvase C0L90_06950 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C0L90_06950 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C0L90_06960 PF02566 OsmC-like protein C0L90_06970 PF02567 Phenazine biosynthesis-like protein C0L90_06980 PF00696 Amino acid kinase family C0L90_06980 PF01842 ACT domain C0L90_06995 PF08245 Mur ligase middle domain C0L90_07010 PF01609 Transposase DDE domain C0L90_07010 PF05598 Transposase domain (DUF772) C0L90_07020 PF00348 Polyprenyl synthetase C0L90_07025 PF00436 Single-strand binding protein family C0L90_07030 PF00360 Phytochrome region C0L90_07030 PF00563 EAL domain C0L90_07030 PF00990 Diguanylate cyclase, GGDEF domain C0L90_07030 PF01590 GAF domain C0L90_07035 PF00109 Beta-ketoacyl synthase, N-terminal domain C0L90_07035 PF02801 Beta-ketoacyl synthase, C-terminal domain C0L90_07035 PF08659 KR domain C0L90_07035 PF00550 Phosphopantetheine attachment site C0L90_07035 PF16197 Ketoacyl-synthetase C-terminal extension C0L90_07035 PF00698 Acyl transferase domain C0L90_07035 PF14765 Polyketide synthase dehydratase C0L90_07035 PF08240 Alcohol dehydrogenase GroES-like domain C0L90_07035 PF09277 Erythronolide synthase, docking C0L90_07035 PF08990 Erythronolide synthase docking C0L90_07075 PF04328 Selenoprotein, putative C0L90_07080 PF02554 Carbon starvation protein CstA C0L90_07080 PF13722 5TM C-terminal transporter carbon starvation CstA C0L90_07085 PF05726 Pirin C-terminal cupin domain C0L90_07085 PF02678 Pirin C0L90_07095 PF04717 Type VI secretion system, phage-baseplate injector C0L90_07135 PF05598 Transposase domain (DUF772) C0L90_07180 PF04493 Endonuclease V C0L90_07185 PF00300 Histidine phosphatase superfamily (branch 1) C0L90_07195 PF01339 CheB methylesterase C0L90_07195 PF00072 Response regulator receiver domain C0L90_07200 PF03705 CheR methyltransferase, all-alpha domain C0L90_07200 PF01739 CheR methyltransferase, SAM binding domain C0L90_07205 PF00563 EAL domain C0L90_07205 PF13426 PAS domain C0L90_07205 PF00990 Diguanylate cyclase, GGDEF domain C0L90_07210 PF01584 CheW-like domain C0L90_07215 PF02203 Tar ligand binding domain homologue C0L90_07215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0L90_07215 PF00672 HAMP domain C0L90_07245 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ C0L90_07270 PF00795 Carbon-nitrogen hydrolase C0L90_07280 PF00749 tRNA synthetases class I (E and Q), catalytic domain C0L90_07285 PF01475 Ferric uptake regulator family C0L90_07315 PF13936 Helix-turn-helix domain C0L90_07315 PF00665 Integrase core domain C0L90_07320 PF05598 Transposase domain (DUF772) C0L90_07390 PF08240 Alcohol dehydrogenase GroES-like domain C0L90_07390 PF00107 Zinc-binding dehydrogenase C0L90_07395 PF00654 Voltage gated chloride channel C0L90_07405 PF05598 Transposase domain (DUF772) C0L90_07405 PF01609 Transposase DDE domain C0L90_07410 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C0L90_07410 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C0L90_07455 PF04545 Sigma-70, region 4 C0L90_07455 PF04539 Sigma-70 region 3 C0L90_07455 PF04542 Sigma-70 region 2 C0L90_07460 PF00271 Helicase conserved C-terminal domain C0L90_07460 PF00270 DEAD/DEAH box helicase C0L90_07460 PF03880 DbpA RNA binding domain C0L90_07465 PF00563 EAL domain C0L90_07465 PF08448 PAS fold C0L90_07465 PF00990 Diguanylate cyclase, GGDEF domain C0L90_07470 PF00849 RNA pseudouridylate synthase C0L90_07470 PF01479 S4 domain C0L90_07490 PF03737 Aldolase/RraA C0L90_07495 PF00144 Beta-lactamase C0L90_07500 PF00999 Sodium/hydrogen exchanger family C0L90_07505 PF00672 HAMP domain C0L90_07505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_07505 PF00512 His Kinase A (phospho-acceptor) domain C0L90_07510 PF00072 Response regulator receiver domain C0L90_07510 PF00486 Transcriptional regulatory protein, C terminal C0L90_07515 PF02321 Outer membrane efflux protein C0L90_07530 PF00873 AcrB/AcrD/AcrF family C0L90_07540 PF00664 ABC transporter transmembrane region C0L90_07540 PF00005 ABC transporter C0L90_07565 PF05598 Transposase domain (DUF772) C0L90_07565 PF01609 Transposase DDE domain C0L90_07610 PF00085 Thioredoxin C0L90_07620 PF13603 Leucyl-tRNA synthetase, Domain 2 C0L90_07620 PF08264 Anticodon-binding domain of tRNA C0L90_07620 PF00133 tRNA synthetases class I (I, L, M and V) C0L90_07640 PF01467 Cytidylyltransferase-like C0L90_07660 PF02590 Predicted SPOUT methyltransferase C0L90_07670 PF03544 Gram-negative bacterial TonB protein C-terminal C0L90_07685 PF04402 Protein of unknown function (DUF541) C0L90_07690 PF02545 Maf-like protein C0L90_07695 PF10150 Ribonuclease E/G family C0L90_07695 PF00575 S1 RNA binding domain C0L90_07700 PF13116 Protein of unknown function C0L90_07700 PF13502 AsmA-like C-terminal region C0L90_07710 PF01523 Putative modulator of DNA gyrase C0L90_07715 PF04751 Protein of unknown function (DUF615) C0L90_07720 PF01523 Putative modulator of DNA gyrase C0L90_07735 PF14521 Lysine-specific metallo-endopeptidase C0L90_07745 PF00348 Polyprenyl synthetase C0L90_07750 PF02609 Exonuclease VII small subunit C0L90_07755 PF11734 TilS substrate C-terminal domain C0L90_07755 PF09179 TilS substrate binding domain C0L90_07755 PF01171 PP-loop family C0L90_07760 PF00245 Alkaline phosphatase C0L90_07765 PF00375 Sodium:dicarboxylate symporter family C0L90_07780 PF00877 NlpC/P60 family C0L90_07785 PF00877 NlpC/P60 family C0L90_07790 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C0L90_07795 PF04235 Protein of unknown function (DUF418) C0L90_07800 PF01266 FAD dependent oxidoreductase C0L90_07805 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C0L90_07805 PF07992 Pyridine nucleotide-disulphide oxidoreductase C0L90_07830 PF01609 Transposase DDE domain C0L90_07830 PF05598 Transposase domain (DUF772) C0L90_07840 PF00665 Integrase core domain C0L90_07840 PF13936 Helix-turn-helix domain C0L90_07870 PF00665 Integrase core domain C0L90_07870 PF13936 Helix-turn-helix domain C0L90_07875 PF05598 Transposase domain (DUF772) C0L90_07875 PF01609 Transposase DDE domain C0L90_07890 PF10609 NUBPL iron-transfer P-loop NTPase C0L90_07900 PF00692 dUTPase C0L90_07915 PF05598 Transposase domain (DUF772) C0L90_07915 PF01609 Transposase DDE domain C0L90_07930 PF01738 Dienelactone hydrolase family C0L90_07935 PF04055 Radical SAM superfamily C0L90_07935 PF00919 Uncharacterized protein family UPF0004 C0L90_07935 PF18693 TRAM domain C0L90_07945 PF05598 Transposase domain (DUF772) C0L90_07945 PF01609 Transposase DDE domain C0L90_07955 PF03449 Transcription elongation factor, N-terminal C0L90_07955 PF01272 Transcription elongation factor, GreA/GreB, C-term C0L90_07970 PF00665 Integrase core domain C0L90_07970 PF13936 Helix-turn-helix domain C0L90_07980 PF05872 Bacterial protein of unknown function (DUF853) C0L90_08000 PF02666 Phosphatidylserine decarboxylase C0L90_08005 PF02630 SCO1/SenC C0L90_08010 PF05175 Methyltransferase small domain C0L90_08015 PF01264 Chorismate synthase C0L90_08020 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C0L90_08020 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C0L90_08025 PF02774 Semialdehyde dehydrogenase, dimerisation domain C0L90_08025 PF01118 Semialdehyde dehydrogenase, NAD binding domain C0L90_08045 PF01416 tRNA pseudouridine synthase C0L90_08050 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C0L90_08055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L90_08055 PF03466 LysR substrate binding domain C0L90_08060 PF00291 Pyridoxal-phosphate dependent enzyme C0L90_08070 PF00290 Tryptophan synthase alpha chain C0L90_08075 PF01039 Carboxyl transferase domain C0L90_08075 PF17848 Acetyl-coA carboxylase zinc finger domain C0L90_08080 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C0L90_08080 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C0L90_08080 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C0L90_08080 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C0L90_08095 PF00563 EAL domain C0L90_08095 PF00990 Diguanylate cyclase, GGDEF domain C0L90_08095 PF03707 Bacterial signalling protein N terminal repeat C0L90_08135 PF00121 Triosephosphate isomerase C0L90_08150 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C0L90_08155 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C0L90_08160 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C0L90_08165 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C0L90_08175 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C0L90_08175 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C0L90_08175 PF10531 SLBB domain C0L90_08180 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal C0L90_08180 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C0L90_08180 PF00384 Molybdopterin oxidoreductase C0L90_08185 PF00146 NADH dehydrogenase C0L90_08190 PF12838 4Fe-4S dicluster domain C0L90_08195 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 C0L90_08200 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C0L90_08205 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C0L90_08205 PF00361 Proton-conducting membrane transporter C0L90_08210 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus C0L90_08210 PF00361 Proton-conducting membrane transporter C0L90_08215 PF00361 Proton-conducting membrane transporter C0L90_08225 PF17384 RimP C-terminal SH3 domain C0L90_08225 PF02576 RimP N-terminal domain C0L90_08230 PF13184 NusA-like KH domain C0L90_08230 PF08529 NusA N-terminal domain C0L90_08230 PF00575 S1 RNA binding domain C0L90_08235 PF11987 Translation-initiation factor 2 C0L90_08235 PF00009 Elongation factor Tu GTP binding domain C0L90_08235 PF08364 Bacterial translation initiation factor IF-2 associated region C0L90_08235 PF04760 Translation initiation factor IF-2, N-terminal region C0L90_08240 PF02033 Ribosome-binding factor A C0L90_08245 PF01509 TruB family pseudouridylate synthase (N terminal domain) C0L90_08245 PF16198 tRNA pseudouridylate synthase B C-terminal domain C0L90_08245 PF09157 Pseudouridine synthase II TruB, C-terminal C0L90_08250 PF00312 Ribosomal protein S15 C0L90_08255 PF00013 KH domain C0L90_08255 PF00575 S1 RNA binding domain C0L90_08255 PF03725 3' exoribonuclease family, domain 2 C0L90_08255 PF01138 3' exoribonuclease family, domain 1 C0L90_08255 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C0L90_08265 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C0L90_08265 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C0L90_08275 PF00731 AIR carboxylase C0L90_08280 PF02222 ATP-grasp domain C0L90_08280 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain C0L90_08285 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C0L90_08285 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C0L90_08290 PF00462 Glutaredoxin C0L90_08300 PF01914 MarC family integral membrane protein C0L90_08310 PF00593 TonB dependent receptor C0L90_08315 PF05598 Transposase domain (DUF772) C0L90_08315 PF01609 Transposase DDE domain C0L90_08320 PF11892 Domain of unknown function (DUF3412) C0L90_08320 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases C0L90_08320 PF03641 Possible lysine decarboxylase C0L90_08350 PF05567 Neisseria PilC beta-propeller domain C0L90_08365 PF07963 Prokaryotic N-terminal methylation motif C0L90_08365 PF00114 Pilin (bacterial filament) C0L90_08370 PF17757 UvrB interaction domain C0L90_08370 PF00271 Helicase conserved C-terminal domain C0L90_08370 PF04851 Type III restriction enzyme, res subunit C0L90_08370 PF02151 UvrB/uvrC motif C0L90_08370 PF12344 Ultra-violet resistance protein B C0L90_08400 PF03837 RecT family C0L90_08485 PF00145 C-5 cytosine-specific DNA methylase C0L90_08500 PF01555 DNA methylase C0L90_08515 PF07102 Protein of unknown function (DUF1364) C0L90_08690 PF17392 Urocanase C-terminal domain C0L90_08690 PF01175 Urocanase Rossmann-like domain C0L90_08690 PF17391 Urocanase N-terminal domain C0L90_08700 PF00221 Aromatic amino acid lyase C0L90_08705 PF07969 Amidohydrolase family C0L90_08715 PF07702 UTRA domain C0L90_08715 PF00392 Bacterial regulatory proteins, gntR family C0L90_08740 PF01794 Ferric reductase like transmembrane component C0L90_08750 PF00174 Oxidoreductase molybdopterin binding domain C0L90_08755 PF00266 Aminotransferase class-V C0L90_08760 PF01817 Chorismate mutase type II C0L90_08760 PF00800 Prephenate dehydratase C0L90_08760 PF01842 ACT domain C0L90_08765 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C0L90_08790 PF01609 Transposase DDE domain C0L90_08790 PF05598 Transposase domain (DUF772) C0L90_08795 PF03544 Gram-negative bacterial TonB protein C-terminal C0L90_08800 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C0L90_08800 PF02403 Seryl-tRNA synthetase N-terminal domain C0L90_08810 PF02525 Flavodoxin-like fold C0L90_08815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L90_08815 PF03466 LysR substrate binding domain C0L90_08830 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin C0L90_08850 PF03377 TAL effector repeat C0L90_08865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0L90_08865 PF00672 HAMP domain C0L90_08865 PF02203 Tar ligand binding domain homologue C0L90_08885 PF00672 HAMP domain C0L90_08885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_08885 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C0L90_08885 PF01627 Hpt domain C0L90_08885 PF00072 Response regulator receiver domain C0L90_08885 PF00512 His Kinase A (phospho-acceptor) domain C0L90_08890 PF06745 KaiC C0L90_08895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_08895 PF13426 PAS domain C0L90_08895 PF00072 Response regulator receiver domain C0L90_08905 PF03918 Cytochrome C biogenesis protein C0L90_08910 PF08534 Redoxin C0L90_08915 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal C0L90_08915 PF01578 Cytochrome C assembly protein C0L90_08920 PF03100 CcmE C0L90_08925 PF04995 Heme exporter protein D (CcmD) C0L90_08930 PF01578 Cytochrome C assembly protein C0L90_08935 PF00082 Subtilase family C0L90_08945 PF08281 Sigma-70, region 4 C0L90_08945 PF04542 Sigma-70 region 2 C0L90_08955 PF00034 Cytochrome c C0L90_08970 PF05523 WxcM-like, C-terminal C0L90_08990 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C0L90_08995 PF01943 Polysaccharide biosynthesis protein C0L90_09000 PF00535 Glycosyl transferase family 2 C0L90_09035 PF13579 Glycosyl transferase 4-like domain C0L90_09035 PF00534 Glycosyl transferases group 1 C0L90_09050 PF06745 KaiC C0L90_09055 PF00005 ABC transporter C0L90_09055 PF00664 ABC transporter transmembrane region C0L90_09065 PF07690 Major Facilitator Superfamily C0L90_09085 PF00296 Luciferase-like monooxygenase C0L90_09100 PF01595 Cyclin M transmembrane N-terminal domain C0L90_09100 PF03471 Transporter associated domain C0L90_09100 PF00571 CBS domain C0L90_09115 PF01384 Phosphate transporter family C0L90_09135 PF00204 DNA gyrase B C0L90_09135 PF00986 DNA gyrase B subunit, carboxyl terminus C0L90_09135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_09135 PF01751 Toprim domain C0L90_09145 PF06418 CTP synthase N-terminus C0L90_09145 PF00117 Glutamine amidotransferase class-I C0L90_09150 PF00793 DAHP synthetase I family C0L90_09155 PF03952 Enolase, N-terminal domain C0L90_09155 PF00113 Enolase, C-terminal TIM barrel domain C0L90_09160 PF04977 Septum formation initiator C0L90_09165 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C0L90_09175 PF02542 YgbB family C0L90_09180 PF01142 tRNA pseudouridine synthase D (TruD) C0L90_09185 PF01713 Smr domain C0L90_09190 PF01975 Survival protein SurE C0L90_09200 PF09335 SNARE associated Golgi protein C0L90_09205 PF01476 LysM domain C0L90_09205 PF01551 Peptidase family M23 C0L90_09215 PF01985 CRS1 / YhbY (CRM) domain C0L90_09220 PF01728 FtsJ-like methyltransferase C0L90_09225 PF01434 Peptidase family M41 C0L90_09225 PF17862 AAA+ lid domain C0L90_09225 PF00004 ATPase family associated with various cellular activities (AAA) C0L90_09225 PF06480 FtsH Extracellular C0L90_09230 PF00809 Pterin binding enzyme C0L90_09240 PF17209 Hfq protein C0L90_09245 PF13167 GTP-binding GTPase N-terminal C0L90_09245 PF16360 GTP-binding GTPase Middle Region C0L90_09245 PF01926 50S ribosome-binding GTPase C0L90_09250 PF02464 Competence-damaged protein C0L90_09255 PF03109 ABC1 family C0L90_09260 PF00717 Peptidase S24-like C0L90_09260 PF01726 LexA DNA binding domain C0L90_09265 PF00154 recA bacterial DNA recombination protein C0L90_09275 PF02631 RecX family C0L90_09280 PF01411 tRNA synthetases class II (A) C0L90_09280 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C0L90_09280 PF02272 DHHA1 domain C0L90_09285 PF02599 Global regulator protein family C0L90_09340 PF02678 Pirin C0L90_09340 PF17954 Quercetinase C-terminal cupin domain C0L90_09345 PF03466 LysR substrate binding domain C0L90_09345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L90_09370 PF08543 Phosphomethylpyrimidine kinase C0L90_09370 PF02581 Thiamine monophosphate synthase C0L90_09380 PF02562 PhoH-like protein C0L90_09380 PF13638 PIN domain C0L90_09385 PF00578 AhpC/TSA family C0L90_09400 PF00701 Dihydrodipicolinate synthetase family C0L90_09410 PF11953 Domain of unknown function (DUF3470) C0L90_09410 PF00037 4Fe-4S binding domain C0L90_09415 PF05035 2-keto-3-deoxy-galactonokinase C0L90_09420 PF08450 SMP-30/Gluconolactonase/LRE-like region C0L90_09425 PF13378 Enolase C-terminal domain-like C0L90_09425 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C0L90_09430 PF01081 KDPG and KHG aldolase C0L90_09435 PF03466 LysR substrate binding domain C0L90_09435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L90_09455 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C0L90_09455 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C0L90_09465 PF00083 Sugar (and other) transporter C0L90_09485 PF01520 N-acetylmuramoyl-L-alanine amidase C0L90_09490 PF02649 Type I GTP cyclohydrolase folE2 C0L90_09500 PF01743 Poly A polymerase head domain C0L90_09500 PF12626 Polymerase A arginine-rich C-terminus C0L90_09500 PF12627 Probable RNA and SrmB- binding site of polymerase A C0L90_09505 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C0L90_09510 PF02548 Ketopantoate hydroxymethyltransferase C0L90_09515 PF02569 Pantoate-beta-alanine ligase C0L90_09520 PF02261 Aspartate decarboxylase C0L90_09525 PF00342 Phosphoglucose isomerase C0L90_09550 PF14310 Fibronectin type III-like domain C0L90_09550 PF00933 Glycosyl hydrolase family 3 N terminal domain C0L90_09550 PF01915 Glycosyl hydrolase family 3 C-terminal domain C0L90_09560 PF00474 Sodium:solute symporter family C0L90_09570 PF00563 EAL domain C0L90_09570 PF00990 Diguanylate cyclase, GGDEF domain C0L90_09570 PF00360 Phytochrome region C0L90_09570 PF01590 GAF domain C0L90_09580 PF02013 Cellulose or protein binding domain C0L90_09580 PF00150 Cellulase (glycosyl hydrolase family 5) C0L90_09590 PF00072 Response regulator receiver domain C0L90_09600 PF04551 GcpE protein C0L90_09605 PF01569 PAP2 superfamily C0L90_09615 PF07690 Major Facilitator Superfamily C0L90_09625 PF01177 Asp/Glu/Hydantoin racemase C0L90_09635 PF00892 EamA-like transporter family C0L90_09640 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C0L90_09640 PF01565 FAD binding domain C0L90_09645 PF01180 Dihydroorotate dehydrogenase C0L90_09665 PF00171 Aldehyde dehydrogenase family C0L90_09700 PF13840 ACT domain C0L90_09700 PF01842 ACT domain C0L90_09700 PF00696 Amino acid kinase family C0L90_09700 PF03447 Homoserine dehydrogenase, NAD binding domain C0L90_09700 PF00742 Homoserine dehydrogenase C0L90_09705 PF08544 GHMP kinases C terminal C0L90_09705 PF00288 GHMP kinases N terminal domain C0L90_09710 PF07519 Tannase and feruloyl esterase C0L90_09725 PF14821 Threonine synthase N terminus C0L90_09725 PF00291 Pyridoxal-phosphate dependent enzyme C0L90_09740 PF03129 Anticodon binding domain C0L90_09740 PF13393 Histidyl-tRNA synthetase C0L90_09760 PF08029 HisG, C-terminal domain C0L90_09760 PF01634 ATP phosphoribosyltransferase C0L90_09765 PF00815 Histidinol dehydrogenase C0L90_09770 PF00155 Aminotransferase class I and II C0L90_09775 PF00475 Imidazoleglycerol-phosphate dehydratase C0L90_09780 PF00117 Glutamine amidotransferase class-I C0L90_09785 PF00977 Histidine biosynthesis protein C0L90_09790 PF00977 Histidine biosynthesis protein C0L90_09795 PF01502 Phosphoribosyl-AMP cyclohydrolase C0L90_09795 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase C0L90_09820 PF03079 ARD/ARD' family C0L90_09825 PF00596 Class II Aldolase and Adducin N-terminal domain C0L90_09830 PF13520 Amino acid permease C0L90_09835 PF13520 Amino acid permease C0L90_09845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C0L90_09845 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C0L90_09850 PF01565 FAD binding domain C0L90_09850 PF02913 FAD linked oxidases, C-terminal domain C0L90_09875 PF09285 Elongation factor P, C-terminal C0L90_09875 PF08207 Elongation factor P (EF-P) KOW-like domain C0L90_09875 PF01132 Elongation factor P (EF-P) OB domain C0L90_09880 PF00106 short chain dehydrogenase C0L90_09885 PF00682 HMGL-like C0L90_09895 PF00378 Enoyl-CoA hydratase/isomerase C0L90_09905 PF02421 Ferrous iron transport protein B C0L90_09905 PF07664 Ferrous iron transport protein B C terminus C0L90_09905 PF07670 Nucleoside recognition C0L90_09930 PF00155 Aminotransferase class I and II C0L90_09935 PF03473 MOSC domain C0L90_09935 PF03475 3-alpha domain C0L90_09940 PF01113 Dihydrodipicolinate reductase, N-terminus C0L90_09940 PF05173 Dihydrodipicolinate reductase, C-terminus C0L90_09945 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C0L90_09945 PF00117 Glutamine amidotransferase class-I C0L90_09955 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C0L90_09955 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C0L90_09955 PF02142 MGS-like domain C0L90_09960 PF03449 Transcription elongation factor, N-terminal C0L90_09960 PF01272 Transcription elongation factor, GreA/GreB, C-term C0L90_09970 PF01368 DHH family C0L90_09970 PF17768 RecJ OB domain C0L90_09970 PF02272 DHHA1 domain C0L90_09985 PF00072 Response regulator receiver domain C0L90_09985 PF04397 LytTr DNA-binding domain C0L90_09995 PF01336 OB-fold nucleic acid binding domain C0L90_09995 PF00152 tRNA synthetases class II (D, K and N) C0L90_10000 PF00072 Response regulator receiver domain C0L90_10010 PF00512 His Kinase A (phospho-acceptor) domain C0L90_10010 PF00072 Response regulator receiver domain C0L90_10010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_10010 PF01627 Hpt domain C0L90_10015 PF00378 Enoyl-CoA hydratase/isomerase C0L90_10020 PF00501 AMP-binding enzyme C0L90_10020 PF13193 AMP-binding enzyme C-terminal domain C0L90_10030 PF00694 Aconitase C-terminal domain C0L90_10030 PF00330 Aconitase family (aconitate hydratase) C0L90_10045 PF11791 Aconitate B N-terminal domain C0L90_10045 PF00330 Aconitase family (aconitate hydratase) C0L90_10045 PF06434 Aconitate hydratase 2 N-terminus C0L90_10050 PF00561 alpha/beta hydrolase fold C0L90_10060 PF00563 EAL domain C0L90_10060 PF00990 Diguanylate cyclase, GGDEF domain C0L90_10060 PF03707 Bacterial signalling protein N terminal repeat C0L90_10065 PF01339 CheB methylesterase C0L90_10065 PF00072 Response regulator receiver domain C0L90_10070 PF03975 CheD chemotactic sensory transduction C0L90_10075 PF01739 CheR methyltransferase, SAM binding domain C0L90_10075 PF03705 CheR methyltransferase, all-alpha domain C0L90_10080 PF02203 Tar ligand binding domain homologue C0L90_10080 PF00672 HAMP domain C0L90_10080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0L90_10090 PF01584 CheW-like domain C0L90_10095 PF07238 PilZ domain C0L90_10095 PF07317 Flagellar regulator YcgR C0L90_10105 PF02203 Tar ligand binding domain homologue C0L90_10105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0L90_10105 PF00672 HAMP domain C0L90_10110 PF02203 Tar ligand binding domain homologue C0L90_10110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0L90_10110 PF00672 HAMP domain C0L90_10115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0L90_10115 PF02203 Tar ligand binding domain homologue C0L90_10115 PF00672 HAMP domain C0L90_10130 PF00672 HAMP domain C0L90_10130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0L90_10130 PF02203 Tar ligand binding domain homologue C0L90_10135 PF05598 Transposase domain (DUF772) C0L90_10140 PF02203 Tar ligand binding domain homologue C0L90_10140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0L90_10140 PF00672 HAMP domain C0L90_10145 PF02203 Tar ligand binding domain homologue C0L90_10145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0L90_10145 PF00672 HAMP domain C0L90_10175 PF02203 Tar ligand binding domain homologue C0L90_10175 PF00672 HAMP domain C0L90_10175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0L90_10180 PF00665 Integrase core domain C0L90_10180 PF13936 Helix-turn-helix domain C0L90_10195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_10195 PF01627 Hpt domain C0L90_10195 PF02895 Signal transducing histidine kinase, homodimeric domain C0L90_10195 PF09078 CheY binding C0L90_10195 PF01584 CheW-like domain C0L90_10200 PF00072 Response regulator receiver domain C0L90_10210 PF01584 CheW-like domain C0L90_10215 PF13614 AAA domain C0L90_10220 PF00691 OmpA family C0L90_10220 PF13677 Membrane MotB of proton-channel complex MotA/MotB C0L90_10225 PF01618 MotA/TolQ/ExbB proton channel family C0L90_10245 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C0L90_10245 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C0L90_10260 PF07715 TonB-dependent Receptor Plug Domain C0L90_10260 PF00593 TonB dependent receptor C0L90_10280 PF17728 BsuBI/PstI restriction endonuclease HTH domain C0L90_10280 PF06616 BsuBI/PstI restriction endonuclease domain C0L90_10285 PF05598 Transposase domain (DUF772) C0L90_10285 PF01609 Transposase DDE domain C0L90_10330 PF05598 Transposase domain (DUF772) C0L90_10340 PF05598 Transposase domain (DUF772) C0L90_10350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_10350 PF01627 Hpt domain C0L90_10350 PF07194 P2 response regulator binding domain C0L90_10350 PF01584 CheW-like domain C0L90_10350 PF02895 Signal transducing histidine kinase, homodimeric domain C0L90_10355 PF04344 Chemotaxis phosphatase, CheZ C0L90_10360 PF00072 Response regulator receiver domain C0L90_10365 PF04545 Sigma-70, region 4 C0L90_10365 PF04542 Sigma-70 region 2 C0L90_10365 PF04539 Sigma-70 region 3 C0L90_10370 PF10609 NUBPL iron-transfer P-loop NTPase C0L90_10375 PF00448 SRP54-type protein, GTPase domain C0L90_10380 PF00771 FHIPEP family C0L90_10385 PF01312 FlhB HrpN YscU SpaS Family C0L90_10390 PF03707 Bacterial signalling protein N terminal repeat C0L90_10390 PF00990 Diguanylate cyclase, GGDEF domain C0L90_10390 PF00563 EAL domain C0L90_10395 PF00990 Diguanylate cyclase, GGDEF domain C0L90_10395 PF13188 PAS domain C0L90_10395 PF00563 EAL domain C0L90_10395 PF03707 Bacterial signalling protein N terminal repeat C0L90_10400 PF00563 EAL domain C0L90_10400 PF00990 Diguanylate cyclase, GGDEF domain C0L90_10400 PF03707 Bacterial signalling protein N terminal repeat C0L90_10400 PF13188 PAS domain C0L90_10405 PF01311 Bacterial export proteins, family 1 C0L90_10410 PF01313 Bacterial export proteins, family 3 C0L90_10415 PF00813 FliP family C0L90_10420 PF04347 Flagellar biosynthesis protein, FliO C0L90_10425 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C0L90_10430 PF02154 Flagellar motor switch protein FliM C0L90_10430 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C0L90_10450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C0L90_10450 PF18269 T3SS EscN ATPase C-terminal domain C0L90_10460 PF01706 FliG C-terminal domain C0L90_10460 PF14841 FliG middle domain C0L90_10460 PF14842 FliG N-terminal domain C0L90_10465 PF08345 Flagellar M-ring protein C-terminal C0L90_10465 PF01514 Secretory protein of YscJ/FliF family C0L90_10470 PF02049 Flagellar hook-basal body complex protein FliE C0L90_10480 PF00535 Glycosyl transferase family 2 C0L90_10480 PF00534 Glycosyl transferases group 1 C0L90_10515 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C0L90_10515 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C0L90_10525 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C0L90_10530 PF00158 Sigma-54 interaction domain C0L90_10530 PF02954 Bacterial regulatory protein, Fis family C0L90_10530 PF00072 Response regulator receiver domain C0L90_10535 PF00072 Response regulator receiver domain C0L90_10535 PF01339 CheB methylesterase C0L90_10540 PF04552 Sigma-54, DNA binding domain C0L90_10540 PF00309 Sigma-54 factor, Activator interacting domain (AID) C0L90_10540 PF04963 Sigma-54 factor, core binding domain C0L90_10545 PF00072 Response regulator receiver domain C0L90_10545 PF00196 Bacterial regulatory proteins, luxR family C0L90_10560 PF02561 Flagellar protein FliS C0L90_10565 PF07196 Flagellin hook IN motif C0L90_10565 PF07195 Flagellar hook-associated protein 2 C-terminus C0L90_10565 PF02465 Flagellar hook-associated protein 2 N-terminus C0L90_10570 PF00669 Bacterial flagellin N-terminal helical region C0L90_10570 PF00700 Bacterial flagellin C-terminal helical region C0L90_10580 PF07196 Flagellin hook IN motif C0L90_10580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C0L90_10585 PF10135 Rod binding protein C0L90_10585 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase C0L90_10590 PF02119 Flagellar P-ring protein C0L90_10595 PF02107 Flagellar L-ring protein C0L90_10600 PF00460 Flagella basal body rod protein C0L90_10600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C0L90_10610 PF00460 Flagella basal body rod protein C0L90_10610 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C0L90_10615 PF07559 Flagellar basal body protein FlaE C0L90_10615 PF00460 Flagella basal body rod protein C0L90_10615 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C0L90_10620 PF03963 Flagellar hook capping protein - N-terminal region C0L90_10625 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C0L90_10625 PF00460 Flagella basal body rod protein C0L90_10635 PF00072 Response regulator receiver domain C0L90_10635 PF01584 CheW-like domain C0L90_10655 PF00512 His Kinase A (phospho-acceptor) domain C0L90_10655 PF13426 PAS domain C0L90_10655 PF13188 PAS domain C0L90_10655 PF00989 PAS fold C0L90_10655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_10660 PF00563 EAL domain C0L90_10660 PF00990 Diguanylate cyclase, GGDEF domain C0L90_10660 PF03707 Bacterial signalling protein N terminal repeat C0L90_10665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_10665 PF07730 Histidine kinase C0L90_10670 PF00563 EAL domain C0L90_10670 PF03707 Bacterial signalling protein N terminal repeat C0L90_10670 PF00990 Diguanylate cyclase, GGDEF domain C0L90_10690 PF12729 Four helix bundle sensory module for signal transduction C0L90_10690 PF00672 HAMP domain C0L90_10690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0L90_10695 PF04356 Protein of unknown function (DUF489) C0L90_10705 PF00293 NUDIX domain C0L90_10710 PF02617 ATP-dependent Clp protease adaptor protein ClpS C0L90_10715 PF02861 Clp amino terminal domain, pathogenicity island component C0L90_10715 PF07724 AAA domain (Cdc48 subfamily) C0L90_10715 PF00004 ATPase family associated with various cellular activities (AAA) C0L90_10715 PF10431 C-terminal, D2-small domain, of ClpB protein C0L90_10715 PF17871 AAA lid domain C0L90_10720 PF01176 Translation initiation factor 1A / IF-1 C0L90_10725 PF03588 Leucyl/phenylalanyl-tRNA protein transferase C0L90_10740 PF07992 Pyridine nucleotide-disulphide oxidoreductase C0L90_10745 PF17854 FtsK alpha domain C0L90_10745 PF09397 Ftsk gamma domain C0L90_10745 PF13491 4TM region of DNA translocase FtsK/SpoIIIE C0L90_10745 PF01580 FtsK/SpoIIIE family C0L90_10755 PF03548 Outer membrane lipoprotein carrier protein LolA C0L90_10770 PF00004 ATPase family associated with various cellular activities (AAA) C0L90_10770 PF16193 AAA C-terminal domain C0L90_10770 PF12002 MgsA AAA+ ATPase C terminal C0L90_10780 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C0L90_10790 PF00654 Voltage gated chloride channel C0L90_10795 PF00108 Thiolase, N-terminal domain C0L90_10795 PF02803 Thiolase, C-terminal domain C0L90_10800 PF00378 Enoyl-CoA hydratase/isomerase C0L90_10800 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C0L90_10800 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C0L90_10810 PF00334 Nucleoside diphosphate kinase C0L90_10815 PF04055 Radical SAM superfamily C0L90_10825 PF13464 Domain of unknown function (DUF4115) C0L90_10835 PF13360 PQQ-like domain C0L90_10835 PF01011 PQQ enzyme repeat C0L90_10840 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C0L90_10840 PF01926 50S ribosome-binding GTPase C0L90_10845 PF03453 MoeA N-terminal region (domain I and II) C0L90_10845 PF03454 MoeA C-terminal region (domain IV) C0L90_10845 PF00994 Probable molybdopterin binding domain C0L90_10855 PF00899 ThiF family C0L90_10865 PF00665 Integrase core domain C0L90_10865 PF13936 Helix-turn-helix domain C0L90_10885 PF00994 Probable molybdopterin binding domain C0L90_10885 PF03453 MoeA N-terminal region (domain I and II) C0L90_10885 PF03454 MoeA C-terminal region (domain IV) C0L90_10890 PF12804 MobA-like NTP transferase domain C0L90_10915 PF10414 Sirohaem synthase dimerisation region C0L90_10915 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C0L90_10915 PF14824 Sirohaem biosynthesis protein central C0L90_10955 PF01609 Transposase DDE domain C0L90_10955 PF05598 Transposase domain (DUF772) C0L90_10980 PF00563 EAL domain C0L90_10980 PF00990 Diguanylate cyclase, GGDEF domain C0L90_10980 PF08447 PAS fold C0L90_10980 PF08448 PAS fold C0L90_10990 PF05598 Transposase domain (DUF772) C0L90_11000 PF00072 Response regulator receiver domain C0L90_11000 PF00196 Bacterial regulatory proteins, luxR family C0L90_11005 PF08448 PAS fold C0L90_11005 PF00512 His Kinase A (phospho-acceptor) domain C0L90_11005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_11005 PF13426 PAS domain C0L90_11005 PF00072 Response regulator receiver domain C0L90_11015 PF00873 AcrB/AcrD/AcrF family C0L90_11020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C0L90_11030 PF03797 Autotransporter beta-domain C0L90_11030 PF00082 Subtilase family C0L90_11040 PF04717 Type VI secretion system, phage-baseplate injector C0L90_11040 PF16671 Actin cross-linking domain C0L90_11045 PF03377 TAL effector repeat C0L90_11050 PF03377 TAL effector repeat C0L90_11055 PF03377 TAL effector repeat C0L90_11075 PF00975 Thioesterase domain C0L90_11075 PF00550 Phosphopantetheine attachment site C0L90_11075 PF00501 AMP-binding enzyme C0L90_11075 PF13193 AMP-binding enzyme C-terminal domain C0L90_11075 PF00668 Condensation domain C0L90_11085 PF13340 Putative transposase of IS4/5 family (DUF4096) C0L90_11090 PF00550 Phosphopantetheine attachment site C0L90_11090 PF00668 Condensation domain C0L90_11090 PF13193 AMP-binding enzyme C-terminal domain C0L90_11090 PF00501 AMP-binding enzyme C0L90_11095 PF13193 AMP-binding enzyme C-terminal domain C0L90_11095 PF00550 Phosphopantetheine attachment site C0L90_11095 PF00668 Condensation domain C0L90_11095 PF00501 AMP-binding enzyme C0L90_11100 PF13193 AMP-binding enzyme C-terminal domain C0L90_11100 PF00501 AMP-binding enzyme C0L90_11100 PF00550 Phosphopantetheine attachment site C0L90_11100 PF00668 Condensation domain C0L90_11105 PF13193 AMP-binding enzyme C-terminal domain C0L90_11105 PF00501 AMP-binding enzyme C0L90_11105 PF00550 Phosphopantetheine attachment site C0L90_11105 PF00668 Condensation domain C0L90_11105 PF00975 Thioesterase domain C0L90_11110 PF00501 AMP-binding enzyme C0L90_11110 PF13193 AMP-binding enzyme C-terminal domain C0L90_11110 PF00668 Condensation domain C0L90_11110 PF00550 Phosphopantetheine attachment site C0L90_11110 PF00975 Thioesterase domain C0L90_11115 PF13193 AMP-binding enzyme C-terminal domain C0L90_11115 PF13193 AMP-binding enzyme C-terminal domain C0L90_11115 PF00668 Condensation domain C0L90_11115 PF00550 Phosphopantetheine attachment site C0L90_11115 PF00501 AMP-binding enzyme C0L90_11115 PF00501 AMP-binding enzyme C0L90_11115 PF00668 Condensation domain C0L90_11115 PF00975 Thioesterase domain C0L90_11115 PF00975 Thioesterase domain C0L90_11115 PF00550 Phosphopantetheine attachment site C0L90_11125 PF00195 Chalcone and stilbene synthases, N-terminal domain C0L90_11125 PF02797 Chalcone and stilbene synthases, C-terminal domain C0L90_11135 PF00378 Enoyl-CoA hydratase/isomerase C0L90_11140 PF00155 Aminotransferase class I and II C0L90_11145 PF00378 Enoyl-CoA hydratase/isomerase C0L90_11150 PF00664 ABC transporter transmembrane region C0L90_11150 PF00005 ABC transporter C0L90_11155 PF03621 MbtH-like protein C0L90_11160 PF12706 Beta-lactamase superfamily domain C0L90_11160 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain C0L90_11205 PF02303 Helix-destabilising protein C0L90_11215 PF17091 Inovirus G7P protein C0L90_11270 PF00873 AcrB/AcrD/AcrF family C0L90_11275 PF00529 HlyD membrane-fusion protein of T1SS C0L90_11275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C0L90_11325 PF00072 Response regulator receiver domain C0L90_11325 PF00486 Transcriptional regulatory protein, C terminal C0L90_11330 PF03150 Di-haem cytochrome c peroxidase C0L90_11330 PF00034 Cytochrome c C0L90_11335 PF00512 His Kinase A (phospho-acceptor) domain C0L90_11335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_11340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L90_11340 PF03466 LysR substrate binding domain C0L90_11360 PF00069 Protein kinase domain C0L90_11400 PF16671 Actin cross-linking domain C0L90_11400 PF04717 Type VI secretion system, phage-baseplate injector C0L90_11425 PF00665 Integrase core domain C0L90_11425 PF13936 Helix-turn-helix domain C0L90_11440 PF01609 Transposase DDE domain C0L90_11440 PF05598 Transposase domain (DUF772) C0L90_11450 PF17871 AAA lid domain C0L90_11450 PF10431 C-terminal, D2-small domain, of ClpB protein C0L90_11450 PF00004 ATPase family associated with various cellular activities (AAA) C0L90_11450 PF07724 AAA domain (Cdc48 subfamily) C0L90_11475 PF05638 Type VI secretion system effector, Hcp C0L90_11525 PF01609 Transposase DDE domain C0L90_11525 PF05598 Transposase domain (DUF772) C0L90_11535 PF01106 NifU-like domain C0L90_11540 PF01329 Pterin 4 alpha carbinolamine dehydratase C0L90_11555 PF11737 Protein of unknown function (DUF3300) C0L90_11560 PF00849 RNA pseudouridylate synthase C0L90_11560 PF01479 S4 domain C0L90_11565 PF12111 Polyribonucleotide phosphorylase C terminal C0L90_11565 PF10150 Ribonuclease E/G family C0L90_11565 PF00575 S1 RNA binding domain C0L90_11590 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C0L90_11600 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C0L90_11600 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C0L90_11600 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C0L90_11610 PF17837 4'-phosphopantetheinyl transferase N-terminal domain C0L90_11610 PF01648 4'-phosphopantetheinyl transferase superfamily C0L90_11635 PF01066 CDP-alcohol phosphatidyltransferase C0L90_11640 PF08459 UvrC Helix-hairpin-helix N-terminal C0L90_11640 PF01541 GIY-YIG catalytic domain C0L90_11640 PF02151 UvrB/uvrC motif C0L90_11650 PF01451 Low molecular weight phosphotyrosine protein phosphatase C0L90_11655 PF02348 Cytidylyltransferase C0L90_11660 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C0L90_11665 PF00005 ABC transporter C0L90_11665 PF00664 ABC transporter transmembrane region C0L90_11675 PF01618 MotA/TolQ/ExbB proton channel family C0L90_11680 PF03772 Competence protein C0L90_11680 PF00753 Metallo-beta-lactamase superfamily C0L90_11695 PF00005 ABC transporter C0L90_11700 PF02687 FtsX-like permease family C0L90_11700 PF12704 MacB-like periplasmic core domain C0L90_11710 PF03937 Flavinator of succinate dehydrogenase C0L90_11715 PF13085 2Fe-2S iron-sulfur cluster binding domain C0L90_11725 PF02910 Fumarate reductase flavoprotein C-term C0L90_11725 PF00890 FAD binding domain C0L90_11730 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C0L90_11735 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C0L90_11745 PF01571 Aminomethyltransferase folate-binding domain C0L90_11755 PF17912 MalK OB fold domain C0L90_11755 PF00005 ABC transporter C0L90_11760 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain C0L90_11760 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain C0L90_11765 PF02685 Glucokinase C0L90_11770 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C0L90_11775 PF00920 Dehydratase family C0L90_11780 PF01081 KDPG and KHG aldolase C0L90_11800 PF00873 AcrB/AcrD/AcrF family C0L90_11815 PF00034 Cytochrome c C0L90_11860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_11860 PF09308 LuxQ, periplasmic C0L90_11860 PF00512 His Kinase A (phospho-acceptor) domain C0L90_11860 PF00072 Response regulator receiver domain C0L90_11875 PF00575 S1 RNA binding domain C0L90_11875 PF16921 Tex protein YqgF-like domain C0L90_11875 PF17674 HHH domain C0L90_11875 PF09371 Tex-like protein N-terminal domain C0L90_11885 PF00355 Rieske [2Fe-2S] domain C0L90_11885 PF01266 FAD dependent oxidoreductase C0L90_11900 PF00561 alpha/beta hydrolase fold C0L90_11910 PF01066 CDP-alcohol phosphatidyltransferase C0L90_11930 PF03618 Kinase/pyrophosphorylase C0L90_11935 PF00391 PEP-utilising enzyme, mobile domain C0L90_11935 PF02896 PEP-utilising enzyme, TIM barrel domain C0L90_11935 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C0L90_11940 PF05552 Conserved TM helix C0L90_11940 PF00924 Mechanosensitive ion channel C0L90_11945 PF00929 Exonuclease C0L90_11950 PF14437 MafB19-like deaminase C0L90_11955 PF01325 Iron dependent repressor, N-terminal DNA binding domain C0L90_11955 PF02742 Iron dependent repressor, metal binding and dimerisation domain C0L90_11960 PF01566 Natural resistance-associated macrophage protein C0L90_11990 PF03466 LysR substrate binding domain C0L90_11990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L90_11995 PF03601 Conserved hypothetical protein 698 C0L90_12015 PF03466 LysR substrate binding domain C0L90_12015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L90_12020 PF00361 Proton-conducting membrane transporter C0L90_12020 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C0L90_12020 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus C0L90_12025 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) C0L90_12030 PF00958 GMP synthase C terminal domain C0L90_12030 PF02540 NAD synthase C0L90_12030 PF00117 Glutamine amidotransferase class-I C0L90_12035 PF00478 IMP dehydrogenase / GMP reductase domain C0L90_12035 PF00571 CBS domain C0L90_12040 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C0L90_12040 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C0L90_12055 PF00483 Nucleotidyl transferase C0L90_12060 PF02719 Polysaccharide biosynthesis protein C0L90_12065 PF00953 Glycosyl transferase family 4 C0L90_12070 PF18073 Rubredoxin metal binding domain C0L90_12080 PF00216 Bacterial DNA-binding protein C0L90_12085 PF00575 S1 RNA binding domain C0L90_12090 PF02224 Cytidylate kinase C0L90_12095 PF00444 Ribosomal protein L36 C0L90_12105 PF04371 Porphyromonas-type peptidyl-arginine deiminase C0L90_12115 PF00795 Carbon-nitrogen hydrolase C0L90_12140 PF00528 Binding-protein-dependent transport system inner membrane component C0L90_12145 PF00528 Binding-protein-dependent transport system inner membrane component C0L90_12165 PF00356 Bacterial regulatory proteins, lacI family C0L90_12175 PF03795 YCII-related domain C0L90_12180 PF02616 Segregation and condensation protein ScpA C0L90_12185 PF04079 Segregation and condensation complex subunit ScpB C0L90_12190 PF00849 RNA pseudouridylate synthase C0L90_12190 PF01479 S4 domain C0L90_12205 PF00795 Carbon-nitrogen hydrolase C0L90_12210 PF00155 Aminotransferase class I and II C0L90_12215 PF00005 ABC transporter C0L90_12220 PF03379 CcmB protein C0L90_12225 PF01578 Cytochrome C assembly protein C0L90_12235 PF03100 CcmE C0L90_12240 PF01578 Cytochrome C assembly protein C0L90_12240 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal C0L90_12245 PF08534 Redoxin C0L90_12250 PF03918 Cytochrome C biogenesis protein C0L90_12260 PF00561 alpha/beta hydrolase fold C0L90_12265 PF00313 'Cold-shock' DNA-binding domain C0L90_12275 PF00005 ABC transporter C0L90_12275 PF00664 ABC transporter transmembrane region C0L90_12280 PF00005 ABC transporter C0L90_12280 PF00664 ABC transporter transmembrane region C0L90_12290 PF01654 Cytochrome bd terminal oxidase subunit I C0L90_12320 PF02129 X-Pro dipeptidyl-peptidase (S15 family) C0L90_12320 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain C0L90_12325 PF00171 Aldehyde dehydrogenase family C0L90_12330 PF01472 PUA domain C0L90_12330 PF00696 Amino acid kinase family C0L90_12345 PF00206 Lyase C0L90_12350 PF01118 Semialdehyde dehydrogenase, NAD binding domain C0L90_12360 PF00696 Amino acid kinase family C0L90_12360 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase C0L90_12365 PF01546 Peptidase family M20/M25/M40 C0L90_12365 PF07687 Peptidase dimerisation domain C0L90_12370 PF00764 Arginosuccinate synthase C0L90_12375 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C0L90_12375 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C0L90_12385 PF09190 DALR domain C0L90_12385 PF01406 tRNA synthetases class I (C) catalytic domain C0L90_12390 PF02657 Fe-S metabolism associated domain C0L90_12405 PF01258 Prokaryotic dksA/traR C4-type zinc finger C0L90_12410 PF01809 Putative membrane protein insertion efficiency factor C0L90_12415 PF01979 Amidohydrolase family C0L90_12420 PF01551 Peptidase family M23 C0L90_12420 PF08460 Bacterial SH3 domain C0L90_12430 PF05985 Ethanolamine ammonia-lyase light chain (EutC) C0L90_12445 PF01095 Pectinesterase C0L90_12455 PF00295 Glycosyl hydrolases family 28 C0L90_12470 PF13419 Haloacid dehalogenase-like hydrolase C0L90_12480 PF01979 Amidohydrolase family C0L90_12495 PF01132 Elongation factor P (EF-P) OB domain C0L90_12495 PF08207 Elongation factor P (EF-P) KOW-like domain C0L90_12495 PF09285 Elongation factor P, C-terminal C0L90_12500 PF04055 Radical SAM superfamily C0L90_12505 PF13188 PAS domain C0L90_12505 PF00563 EAL domain C0L90_12505 PF03707 Bacterial signalling protein N terminal repeat C0L90_12505 PF00990 Diguanylate cyclase, GGDEF domain C0L90_12515 PF00588 SpoU rRNA Methylase family C0L90_12520 PF00459 Inositol monophosphatase family C0L90_12525 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C0L90_12525 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C0L90_12530 PF00545 ribonuclease C0L90_12555 PF00270 DEAD/DEAH box helicase C0L90_12555 PF03880 DbpA RNA binding domain C0L90_12555 PF00271 Helicase conserved C-terminal domain C0L90_12560 PF00156 Phosphoribosyl transferase domain C0L90_12565 PF02696 Uncharacterized ACR, YdiU/UPF0061 family C0L90_12575 PF14497 Glutathione S-transferase, C-terminal domain C0L90_12575 PF02798 Glutathione S-transferase, N-terminal domain C0L90_12580 PF00313 'Cold-shock' DNA-binding domain C0L90_12585 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 C0L90_12590 PF07152 YaeQ protein C0L90_12600 PF00563 EAL domain C0L90_12600 PF00498 FHA domain C0L90_12600 PF00990 Diguanylate cyclase, GGDEF domain C0L90_12605 PF01435 Peptidase family M48 C0L90_12610 PF00749 tRNA synthetases class I (E and Q), catalytic domain C0L90_12615 PF00106 short chain dehydrogenase C0L90_12620 PF07879 PHB/PHA accumulation regulator DNA-binding domain C0L90_12620 PF05233 PHB accumulation regulatory domain C0L90_12635 PF01119 DNA mismatch repair protein, C-terminal domain C0L90_12635 PF08676 MutL C terminal dimerisation domain C0L90_12640 PF01520 N-acetylmuramoyl-L-alanine amidase C0L90_12640 PF11741 AMIN domain C0L90_12645 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C0L90_12650 PF01256 Carbohydrate kinase C0L90_12650 PF03853 YjeF-related protein N-terminus C0L90_12655 PF08331 Domain of unknown function (DUF1730) C0L90_12660 PF13742 OB-fold nucleic acid binding domain C0L90_12660 PF02601 Exonuclease VII, large subunit C0L90_12675 PF05598 Transposase domain (DUF772) C0L90_12675 PF01609 Transposase DDE domain C0L90_12685 PF03781 Sulfatase-modifying factor enzyme 1 C0L90_12700 PF00570 HRDC domain C0L90_12700 PF01612 3'-5' exonuclease C0L90_12735 PF01584 CheW-like domain C0L90_12740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0L90_12740 PF00672 HAMP domain C0L90_12740 PF02743 Cache domain C0L90_12770 PF04386 Stringent starvation protein B C0L90_12775 PF00043 Glutathione S-transferase, C-terminal domain C0L90_12775 PF02798 Glutathione S-transferase, N-terminal domain C0L90_12780 PF02167 Cytochrome C1 family C0L90_12785 PF00033 Cytochrome b/b6/petB C0L90_12785 PF00032 Cytochrome b(C-terminal)/b6/petD C0L90_12790 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal C0L90_12790 PF00355 Rieske [2Fe-2S] domain C0L90_12800 PF01464 Transglycosylase SLT domain C0L90_12825 PF00919 Uncharacterized protein family UPF0004 C0L90_12825 PF04055 Radical SAM superfamily C0L90_12825 PF01938 TRAM domain C0L90_12830 PF02562 PhoH-like protein C0L90_12840 PF02130 Uncharacterized protein family UPF0054 C0L90_12850 PF03471 Transporter associated domain C0L90_12850 PF00571 CBS domain C0L90_12865 PF00171 Aldehyde dehydrogenase family C0L90_12870 PF00528 Binding-protein-dependent transport system inner membrane component C0L90_12875 PF00528 Binding-protein-dependent transport system inner membrane component C0L90_12885 PF00005 ABC transporter C0L90_12885 PF08402 TOBE domain C0L90_12890 PF02321 Outer membrane efflux protein C0L90_12895 PF07690 Major Facilitator Superfamily C0L90_12900 PF13533 Biotin-lipoyl like C0L90_12915 PF05598 Transposase domain (DUF772) C0L90_12915 PF01609 Transposase DDE domain C0L90_12930 PF00120 Glutamine synthetase, catalytic domain C0L90_12940 PF00120 Glutamine synthetase, catalytic domain C0L90_12945 PF01266 FAD dependent oxidoreductase C0L90_12950 PF00990 Diguanylate cyclase, GGDEF domain C0L90_12950 PF00072 Response regulator receiver domain C0L90_12955 PF00083 Sugar (and other) transporter C0L90_12955 PF07690 Major Facilitator Superfamily C0L90_12965 PF00384 Molybdopterin oxidoreductase C0L90_12970 PF02634 FdhD/NarQ family C0L90_12975 PF07690 Major Facilitator Superfamily C0L90_12985 PF00202 Aminotransferase class-III C0L90_12990 PF00005 ABC transporter C0L90_13000 PF04286 Protein of unknown function (DUF445) C0L90_13005 PF00512 His Kinase A (phospho-acceptor) domain C0L90_13005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_13005 PF01627 Hpt domain C0L90_13005 PF00672 HAMP domain C0L90_13005 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C0L90_13005 PF00072 Response regulator receiver domain C0L90_13010 PF00072 Response regulator receiver domain C0L90_13015 PF05598 Transposase domain (DUF772) C0L90_13015 PF01609 Transposase DDE domain C0L90_13025 PF07690 Major Facilitator Superfamily C0L90_13050 PF05598 Transposase domain (DUF772) C0L90_13060 PF01609 Transposase DDE domain C0L90_13060 PF05598 Transposase domain (DUF772) C0L90_13070 PF05088 Bacterial NAD-glutamate dehydrogenase C0L90_13080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C0L90_13080 PF00529 HlyD membrane-fusion protein of T1SS C0L90_13085 PF00873 AcrB/AcrD/AcrF family C0L90_13100 PF00356 Bacterial regulatory proteins, lacI family C0L90_13105 PF05524 PEP-utilising enzyme, N-terminal C0L90_13105 PF00391 PEP-utilising enzyme, mobile domain C0L90_13105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C0L90_13105 PF02896 PEP-utilising enzyme, TIM barrel domain C0L90_13105 PF00381 PTS HPr component phosphorylation site C0L90_13110 PF00294 pfkB family carbohydrate kinase C0L90_13115 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C0L90_13125 PF04717 Type VI secretion system, phage-baseplate injector C0L90_13125 PF16671 Actin cross-linking domain C0L90_13145 PF05598 Transposase domain (DUF772) C0L90_13165 PF07549 SecD/SecF GG Motif C0L90_13165 PF02355 Protein export membrane protein C0L90_13170 PF13721 SecD export protein N-terminal TM region C0L90_13170 PF07549 SecD/SecF GG Motif C0L90_13170 PF02355 Protein export membrane protein C0L90_13175 PF02699 Preprotein translocase subunit C0L90_13180 PF01702 Queuine tRNA-ribosyltransferase C0L90_13185 PF02547 Queuosine biosynthesis protein C0L90_13250 PF00037 4Fe-4S binding domain C0L90_13265 PF01467 Cytidylyltransferase-like C0L90_13275 PF00183 Hsp90 protein C0L90_13275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_13285 PF05598 Transposase domain (DUF772) C0L90_13310 PF04616 Glycosyl hydrolases family 43 C0L90_13315 PF07532 Bacterial Ig-like domain (group 4) C0L90_13320 PF00593 TonB dependent receptor C0L90_13320 PF07715 TonB-dependent Receptor Plug Domain C0L90_13335 PF00082 Subtilase family C0L90_13335 PF09286 Pro-kumamolisin, activation domain C0L90_13375 PF05598 Transposase domain (DUF772) C0L90_13375 PF01609 Transposase DDE domain C0L90_13380 PF05598 Transposase domain (DUF772) C0L90_13380 PF01609 Transposase DDE domain C0L90_13390 PF13520 Amino acid permease C0L90_13405 PF00557 Metallopeptidase family M24 C0L90_13405 PF01321 Creatinase/Prolidase N-terminal domain C0L90_13410 PF00171 Aldehyde dehydrogenase family C0L90_13415 PF00701 Dihydrodipicolinate synthetase family C0L90_13420 PF04324 BFD-like [2Fe-2S] binding domain C0L90_13420 PF07992 Pyridine nucleotide-disulphide oxidoreductase C0L90_13430 PF01266 FAD dependent oxidoreductase C0L90_13435 PF05544 Proline racemase C0L90_13445 PF00448 SRP54-type protein, GTPase domain C0L90_13445 PF02881 SRP54-type protein, helical bundle domain C0L90_13460 PF00730 HhH-GPD superfamily base excision DNA repair protein C0L90_13460 PF10576 Iron-sulfur binding domain of endonuclease III C0L90_13460 PF00633 Helix-hairpin-helix motif C0L90_13460 PF14815 NUDIX domain C0L90_13465 PF04362 Bacterial Fe(2+) trafficking C0L90_13470 PF00072 Response regulator receiver domain C0L90_13470 PF13426 PAS domain C0L90_13470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_13500 PF08212 Lipocalin-like domain C0L90_13510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C0L90_13510 PF02770 Acyl-CoA dehydrogenase, middle domain C0L90_13510 PF12806 Acetyl-CoA dehydrogenase C-terminal like C0L90_13510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C0L90_13520 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C0L90_13520 PF02780 Transketolase, C-terminal domain C0L90_13520 PF02779 Transketolase, pyrimidine binding domain C0L90_13540 PF03808 Glycosyl transferase WecB/TagA/CpsF family C0L90_13555 PF14667 Polysaccharide biosynthesis C-terminal domain C0L90_13565 PF13439 Glycosyltransferase Family 4 C0L90_13565 PF00534 Glycosyl transferases group 1 C0L90_13585 PF02397 Bacterial sugar transferase C0L90_13605 PF13411 MerR HTH family regulatory protein C0L90_13610 PF00216 Bacterial DNA-binding protein C0L90_13615 PF03484 tRNA synthetase B5 domain C0L90_13615 PF03147 Ferredoxin-fold anticodon binding domain C0L90_13615 PF01588 Putative tRNA binding domain C0L90_13615 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C0L90_13615 PF03483 B3/4 domain C0L90_13620 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C0L90_13620 PF01409 tRNA synthetases class II core domain (F) C0L90_13625 PF00453 Ribosomal protein L20 C0L90_13630 PF01632 Ribosomal protein L35 C0L90_13635 PF00707 Translation initiation factor IF-3, C-terminal domain C0L90_13635 PF05198 Translation initiation factor IF-3, N-terminal domain C0L90_13640 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C0L90_13640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C0L90_13640 PF02824 TGS domain C0L90_13640 PF03129 Anticodon binding domain C0L90_13655 PF00521 DNA gyrase/topoisomerase IV, subunit A C0L90_13655 PF03989 DNA gyrase C-terminal domain, beta-propeller C0L90_13660 PF01008 Initiation factor 2 subunit family C0L90_13675 PF00152 tRNA synthetases class II (D, K and N) C0L90_13680 PF12826 Helix-hairpin-helix motif C0L90_13680 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C0L90_13680 PF03120 NAD-dependent DNA ligase OB-fold domain C0L90_13680 PF01653 NAD-dependent DNA ligase adenylation domain C0L90_13680 PF00533 BRCA1 C Terminus (BRCT) domain C0L90_13685 PF00155 Aminotransferase class I and II C0L90_13690 PF04354 ZipA, C-terminal FtsZ-binding domain C0L90_13695 PF02463 RecF/RecN/SMC N terminal domain C0L90_13700 PF01281 Ribosomal protein L9, N-terminal domain C0L90_13700 PF03948 Ribosomal protein L9, C-terminal domain C0L90_13705 PF01084 Ribosomal protein S18 C0L90_13710 PF01250 Ribosomal protein S6 C0L90_13715 PF01521 Iron-sulphur cluster biosynthesis C0L90_13725 PF00152 tRNA synthetases class II (D, K and N) C0L90_13725 PF01336 OB-fold nucleic acid binding domain C0L90_13750 PF00484 Carbonic anhydrase C0L90_13755 PF06052 3-hydroxyanthranilic acid dioxygenase C0L90_13775 PF00266 Aminotransferase class-V C0L90_13780 PF01494 FAD binding domain C0L90_13785 PF08411 Exonuclease C-terminal C0L90_13785 PF00929 Exonuclease C0L90_13795 PF00248 Aldo/keto reductase family C0L90_13810 PF01513 ATP-NAD kinase C0L90_13825 PF10672 S-adenosylmethionine-dependent methyltransferase C0L90_13825 PF01170 Putative RNA methylase family UPF0020 C0L90_13825 PF02926 THUMP domain C0L90_13865 PF00581 Rhodanese-like domain C0L90_13870 PF00293 NUDIX domain C0L90_13875 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C0L90_13875 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C0L90_13880 PF00378 Enoyl-CoA hydratase/isomerase C0L90_13890 PF00730 HhH-GPD superfamily base excision DNA repair protein C0L90_13890 PF00633 Helix-hairpin-helix motif C0L90_13890 PF10576 Iron-sulfur binding domain of endonuclease III C0L90_13895 PF01740 STAS domain C0L90_13895 PF00916 Sulfate permease family C0L90_13900 PF00484 Carbonic anhydrase C0L90_13915 PF12849 PBP superfamily domain C0L90_13920 PF12849 PBP superfamily domain C0L90_13925 PF00528 Binding-protein-dependent transport system inner membrane component C0L90_13930 PF00528 Binding-protein-dependent transport system inner membrane component C0L90_13935 PF00005 ABC transporter C0L90_13940 PF01895 PhoU domain C0L90_13950 PF00929 Exonuclease C0L90_13960 PF00588 SpoU rRNA Methylase family C0L90_13960 PF08032 RNA 2'-O ribose methyltransferase substrate binding C0L90_13975 PF17876 Cold shock domain C0L90_13975 PF08461 Ribonuclease R winged-helix domain C0L90_13975 PF00773 RNB domain C0L90_13975 PF00575 S1 RNA binding domain C0L90_13975 PF08206 Ribonuclease B OB domain C0L90_14005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C0L90_14005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C0L90_14005 PF02770 Acyl-CoA dehydrogenase, middle domain C0L90_14010 PF01209 ubiE/COQ5 methyltransferase family C0L90_14015 PF02574 Homocysteine S-methyltransferase C0L90_14015 PF00809 Pterin binding enzyme C0L90_14020 PF02310 B12 binding domain C0L90_14020 PF02574 Homocysteine S-methyltransferase C0L90_14020 PF00809 Pterin binding enzyme C0L90_14020 PF02607 B12 binding domain C0L90_14020 PF02965 Vitamin B12 dependent methionine synthase, activation domain C0L90_14030 PF00294 pfkB family carbohydrate kinase C0L90_14035 PF07690 Major Facilitator Superfamily C0L90_14055 PF04102 SlyX C0L90_14060 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C0L90_14060 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C0L90_14060 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C0L90_14065 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C0L90_14065 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C0L90_14070 PF00255 Glutathione peroxidase C0L90_14080 PF00392 Bacterial regulatory proteins, gntR family C0L90_14085 PF00005 ABC transporter C0L90_14115 PF00206 Lyase C0L90_14115 PF10415 Fumarase C C-terminus C0L90_14125 PF01609 Transposase DDE domain C0L90_14125 PF05598 Transposase domain (DUF772) C0L90_14140 PF00206 Lyase C0L90_14140 PF08328 Adenylosuccinate lyase C-terminal C0L90_14155 PF08007 Cupin superfamily protein C0L90_14165 PF02779 Transketolase, pyrimidine binding domain C0L90_14165 PF00676 Dehydrogenase E1 component C0L90_14165 PF16078 2-oxoglutarate dehydrogenase N-terminus C0L90_14165 PF16870 2-oxoglutarate dehydrogenase C-terminal C0L90_14170 PF00364 Biotin-requiring enzyme C0L90_14170 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C0L90_14170 PF02817 e3 binding domain C0L90_14175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C0L90_14175 PF07992 Pyridine nucleotide-disulphide oxidoreductase C0L90_14180 PF03641 Possible lysine decarboxylase C0L90_14185 PF01205 Uncharacterized protein family UPF0029 C0L90_14190 PF00664 ABC transporter transmembrane region C0L90_14190 PF00005 ABC transporter C0L90_14220 PF08543 Phosphomethylpyrimidine kinase C0L90_14230 PF01556 DnaJ C terminal domain C0L90_14230 PF00226 DnaJ domain C0L90_14230 PF00684 DnaJ central domain C0L90_14235 PF00012 Hsp70 protein C0L90_14240 PF01025 GrpE C0L90_14245 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding C0L90_14245 PF01628 HrcA protein C terminal domain C0L90_14250 PF02463 RecF/RecN/SMC N terminal domain C0L90_14255 PF01475 Ferric uptake regulator family C0L90_14260 PF04355 SmpA / OmlA family C0L90_14270 PF03658 RnfH family Ubiquitin C0L90_14280 PF01668 SmpB protein C0L90_14285 PF00082 Subtilase family C0L90_14305 PF05598 Transposase domain (DUF772) C0L90_14305 PF01609 Transposase DDE domain C0L90_14310 PF05598 Transposase domain (DUF772) C0L90_14350 PF01053 Cys/Met metabolism PLP-dependent enzyme C0L90_14360 PF07722 Peptidase C26 C0L90_14365 PF01810 LysE type translocator C0L90_14370 PF04204 Homoserine O-succinyltransferase C0L90_14375 PF00120 Glutamine synthetase, catalytic domain C0L90_14385 PF05598 Transposase domain (DUF772) C0L90_14405 PF00990 Diguanylate cyclase, GGDEF domain C0L90_14405 PF08448 PAS fold C0L90_14420 PF00691 OmpA family C0L90_14420 PF05736 OprF membrane domain C0L90_14440 PF00875 DNA photolyase C0L90_14440 PF03441 FAD binding domain of DNA photolyase C0L90_14445 PF03796 DnaB-like helicase C terminal domain C0L90_14445 PF00772 DnaB-like helicase N terminal domain C0L90_14450 PF03358 NADPH-dependent FMN reductase C0L90_14455 PF13537 Glutamine amidotransferase domain C0L90_14455 PF00733 Asparagine synthase C0L90_14460 PF13417 Glutathione S-transferase, N-terminal domain C0L90_14485 PF01026 TatD related DNase C0L90_14490 PF00899 ThiF family C0L90_14505 PF00313 'Cold-shock' DNA-binding domain C0L90_14530 PF02203 Tar ligand binding domain homologue C0L90_14530 PF00672 HAMP domain C0L90_14530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0L90_14535 PF05598 Transposase domain (DUF772) C0L90_14545 PF01609 Transposase DDE domain C0L90_14545 PF05598 Transposase domain (DUF772) C0L90_14555 PF01609 Transposase DDE domain C0L90_14555 PF05598 Transposase domain (DUF772) C0L90_14570 PF05683 Fumarase C-terminus C0L90_14570 PF05681 Fumarate hydratase (Fumerase) C0L90_14580 PF00005 ABC transporter C0L90_14585 PF00970 Oxidoreductase FAD-binding domain C0L90_14585 PF00175 Oxidoreductase NAD-binding domain C0L90_14590 PF00255 Glutathione peroxidase C0L90_14620 PF04542 Sigma-70 region 2 C0L90_14620 PF08281 Sigma-70, region 4 C0L90_14630 PF12802 MarR family C0L90_14665 PF00933 Glycosyl hydrolase family 3 N terminal domain C0L90_14665 PF01915 Glycosyl hydrolase family 3 C-terminal domain C0L90_14665 PF14310 Fibronectin type III-like domain C0L90_14690 PF07690 Major Facilitator Superfamily C0L90_14695 PF00529 HlyD membrane-fusion protein of T1SS C0L90_14695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C0L90_14700 PF02321 Outer membrane efflux protein C0L90_14710 PF12833 Helix-turn-helix domain C0L90_14715 PF03989 DNA gyrase C-terminal domain, beta-propeller C0L90_14715 PF00521 DNA gyrase/topoisomerase IV, subunit A C0L90_14725 PF00210 Ferritin-like domain C0L90_14730 PF01804 Penicillin amidase C0L90_14740 PF07715 TonB-dependent Receptor Plug Domain C0L90_14740 PF00593 TonB dependent receptor C0L90_14750 PF13537 Glutamine amidotransferase domain C0L90_14750 PF00733 Asparagine synthase C0L90_14755 PF07687 Peptidase dimerisation domain C0L90_14755 PF01546 Peptidase family M20/M25/M40 C0L90_14765 PF03960 ArsC family C0L90_14775 PF14602 Hexapeptide repeat of succinyl-transferase C0L90_14775 PF00132 Bacterial transferase hexapeptide (six repeats) C0L90_14775 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal C0L90_14780 PF01909 Nucleotidyltransferase domain C0L90_14780 PF01966 HD domain C0L90_14780 PF08335 GlnD PII-uridylyltransferase C0L90_14785 PF00557 Metallopeptidase family M24 C0L90_14820 PF00318 Ribosomal protein S2 C0L90_14825 PF00889 Elongation factor TS C0L90_14835 PF00696 Amino acid kinase family C0L90_14840 PF01765 Ribosome recycling factor C0L90_14845 PF01255 Putative undecaprenyl diphosphate synthase C0L90_14855 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C0L90_14855 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C0L90_14855 PF13288 DXP reductoisomerase C-terminal domain C0L90_14860 PF02163 Peptidase family M50 C0L90_14860 PF17820 PDZ domain C0L90_14865 PF01103 Surface antigen C0L90_14865 PF07244 Surface antigen variable number repeat C0L90_14875 PF00132 Bacterial transferase hexapeptide (six repeats) C0L90_14875 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C0L90_14880 PF07977 FabA-like domain C0L90_14885 PF00132 Bacterial transferase hexapeptide (six repeats) C0L90_14885 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C0L90_14890 PF02684 Lipid-A-disaccharide synthetase C0L90_14895 PF01351 Ribonuclease HII C0L90_14900 PF14579 Helix-hairpin-helix motif C0L90_14900 PF02811 PHP domain C0L90_14900 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C0L90_14900 PF01336 OB-fold nucleic acid binding domain C0L90_14900 PF07733 Bacterial DNA polymerase III alpha NTPase domain C0L90_14905 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C0L90_14980 PF02592 Putative vitamin uptake transporter C0L90_14995 PF02574 Homocysteine S-methyltransferase C0L90_15000 PF00324 Amino acid permease C0L90_15005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C0L90_15015 PF09334 tRNA synthetases class I (M) C0L90_15015 PF01588 Putative tRNA binding domain C0L90_15025 PF04060 Putative Fe-S cluster C0L90_15045 PF04542 Sigma-70 region 2 C0L90_15045 PF04545 Sigma-70, region 4 C0L90_15090 PF01042 Endoribonuclease L-PSP C0L90_15100 PF09924 Uncharacterised conserved protein (DUF2156) C0L90_15100 PF03706 Lysylphosphatidylglycerol synthase TM region C0L90_15140 PF07690 Major Facilitator Superfamily C0L90_15145 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C0L90_15160 PF08274 PhnA Zinc-Ribbon C0L90_15160 PF03831 PhnA domain C0L90_15170 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C0L90_15200 PF12680 SnoaL-like domain C0L90_15200 PF08281 Sigma-70, region 4 C0L90_15200 PF04542 Sigma-70 region 2 C0L90_15210 PF01258 Prokaryotic dksA/traR C4-type zinc finger C0L90_15220 PF07043 Protein of unknown function (DUF1328) C0L90_15225 PF01863 Protein of unknown function DUF45 C0L90_15235 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C0L90_15235 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C0L90_15240 PF00082 Subtilase family C0L90_15240 PF03797 Autotransporter beta-domain C0L90_15240 PF12951 Passenger-associated-transport-repeat C0L90_15245 PF02803 Thiolase, C-terminal domain C0L90_15245 PF00108 Thiolase, N-terminal domain C0L90_15260 PF00072 Response regulator receiver domain C0L90_15260 PF00990 Diguanylate cyclase, GGDEF domain C0L90_15275 PF04679 ATP dependent DNA ligase C terminal region C0L90_15275 PF04675 DNA ligase N terminus C0L90_15275 PF01068 ATP dependent DNA ligase domain C0L90_15285 PF04675 DNA ligase N terminus C0L90_15285 PF01068 ATP dependent DNA ligase domain C0L90_15285 PF04679 ATP dependent DNA ligase C terminal region C0L90_15290 PF00271 Helicase conserved C-terminal domain C0L90_15290 PF08494 DEAD/H associated C0L90_15290 PF00270 DEAD/DEAH box helicase C0L90_15310 PF00313 'Cold-shock' DNA-binding domain C0L90_15315 PF01048 Phosphorylase superfamily C0L90_15325 PF00933 Glycosyl hydrolase family 3 N terminal domain C0L90_15330 PF04244 Deoxyribodipyrimidine photo-lyase-related protein C0L90_15335 PF01593 Flavin containing amine oxidoreductase C0L90_15350 PF05958 tRNA (Uracil-5-)-methyltransferase C0L90_15360 PF11967 Recombination protein O N terminal C0L90_15360 PF02565 Recombination protein O C terminal C0L90_15365 PF07650 KH domain C0L90_15365 PF01926 50S ribosome-binding GTPase C0L90_15370 PF00035 Double-stranded RNA binding motif C0L90_15370 PF14622 Ribonuclease-III-like C0L90_15380 PF10502 Signal peptidase, peptidase S26 C0L90_15385 PF00679 Elongation factor G C-terminus C0L90_15385 PF00009 Elongation factor Tu GTP binding domain C0L90_15385 PF03144 Elongation factor Tu domain 2 C0L90_15385 PF06421 GTP-binding protein LepA C-terminus C0L90_15390 PF13180 PDZ domain C0L90_15400 PF04542 Sigma-70 region 2 C0L90_15400 PF08281 Sigma-70, region 4 C0L90_15405 PF00378 Enoyl-CoA hydratase/isomerase C0L90_15405 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C0L90_15405 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C0L90_15410 PF01545 Cation efflux family C0L90_15415 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C0L90_15415 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C0L90_15420 PF00378 Enoyl-CoA hydratase/isomerase C0L90_15420 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C0L90_15420 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C0L90_15425 PF00378 Enoyl-CoA hydratase/isomerase C0L90_15430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C0L90_15430 PF02770 Acyl-CoA dehydrogenase, middle domain C0L90_15430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C0L90_15435 PF00171 Aldehyde dehydrogenase family C0L90_15440 PF09856 Predicted transcriptional regulator (DUF2083) C0L90_15440 PF06114 IrrE N-terminal-like domain C0L90_15440 PF01381 Helix-turn-helix C0L90_15455 PF05598 Transposase domain (DUF772) C0L90_15480 PF17149 Periplasmic sensor domain found in signal transduction proteins C0L90_15480 PF00072 Response regulator receiver domain C0L90_15480 PF01627 Hpt domain C0L90_15480 PF00512 His Kinase A (phospho-acceptor) domain C0L90_15480 PF00672 HAMP domain C0L90_15480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_15490 PF00512 His Kinase A (phospho-acceptor) domain C0L90_15490 PF00072 Response regulator receiver domain C0L90_15490 PF17149 Periplasmic sensor domain found in signal transduction proteins C0L90_15490 PF00672 HAMP domain C0L90_15490 PF01627 Hpt domain C0L90_15490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_15495 PF01627 Hpt domain C0L90_15495 PF00512 His Kinase A (phospho-acceptor) domain C0L90_15495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_15495 PF00672 HAMP domain C0L90_15495 PF17149 Periplasmic sensor domain found in signal transduction proteins C0L90_15495 PF00072 Response regulator receiver domain C0L90_15500 PF00512 His Kinase A (phospho-acceptor) domain C0L90_15500 PF17149 Periplasmic sensor domain found in signal transduction proteins C0L90_15500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_15500 PF00672 HAMP domain C0L90_15500 PF00072 Response regulator receiver domain C0L90_15500 PF01627 Hpt domain C0L90_15505 PF04264 YceI-like domain C0L90_15530 PF03315 Serine dehydratase beta chain C0L90_15530 PF03313 Serine dehydratase alpha chain C0L90_15540 PF01053 Cys/Met metabolism PLP-dependent enzyme C0L90_15545 PF00561 alpha/beta hydrolase fold C0L90_15550 PF01476 LysM domain C0L90_15550 PF01551 Peptidase family M23 C0L90_15550 PF08525 Opacity-associated protein A N-terminal motif C0L90_15555 PF16658 Class II release factor RF3, C-terminal domain C0L90_15555 PF00009 Elongation factor Tu GTP binding domain C0L90_15560 PF03006 Haemolysin-III related C0L90_15570 PF05598 Transposase domain (DUF772) C0L90_15580 PF00571 CBS domain C0L90_15580 PF00478 IMP dehydrogenase / GMP reductase domain C0L90_15585 PF00535 Glycosyl transferase family 2 C0L90_15590 PF00912 Transglycosylase C0L90_15595 PF01430 Hsp33 protein C0L90_15605 PF00593 TonB dependent receptor C0L90_15605 PF07715 TonB-dependent Receptor Plug Domain C0L90_15610 PF00440 Bacterial regulatory proteins, tetR family C0L90_15615 PF00561 alpha/beta hydrolase fold C0L90_15620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C0L90_15620 PF09317 Domain of unknown function (DUF1974) C0L90_15620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C0L90_15650 PF01597 Glycine cleavage H-protein C0L90_15655 PF08669 Glycine cleavage T-protein C-terminal barrel domain C0L90_15655 PF01571 Aminomethyltransferase folate-binding domain C0L90_15665 PF01145 SPFH domain / Band 7 family C0L90_15665 PF16200 C-terminal region of band_7 C0L90_15675 PF02694 Uncharacterised BCR, YnfA/UPF0060 family C0L90_15680 PF03819 MazG nucleotide pyrophosphohydrolase domain C0L90_15685 PF00459 Inositol monophosphatase family C0L90_15690 PF00293 NUDIX domain C0L90_15695 PF00202 Aminotransferase class-III C0L90_15700 PF04452 RNA methyltransferase C0L90_15705 PF02685 Glucokinase C0L90_15720 PF00704 Glycosyl hydrolases family 18 C0L90_15720 PF01476 LysM domain C0L90_15740 PF07691 PA14 domain C0L90_15740 PF14310 Fibronectin type III-like domain C0L90_15740 PF00933 Glycosyl hydrolase family 3 N terminal domain C0L90_15740 PF01915 Glycosyl hydrolase family 3 C-terminal domain C0L90_15745 PF00005 ABC transporter C0L90_15745 PF00664 ABC transporter transmembrane region C0L90_15745 PF03412 Peptidase C39 family C0L90_15755 PF05598 Transposase domain (DUF772) C0L90_15765 PF13683 Integrase core domain C0L90_15765 PF13276 HTH-like domain C0L90_15775 PF13936 Helix-turn-helix domain C0L90_15775 PF00665 Integrase core domain C0L90_15790 PF05598 Transposase domain (DUF772) C0L90_15790 PF01609 Transposase DDE domain C0L90_15810 PF00005 ABC transporter C0L90_15810 PF03412 Peptidase C39 family C0L90_15810 PF00664 ABC transporter transmembrane region C0L90_15820 PF05598 Transposase domain (DUF772) C0L90_15845 PF07971 Glycosyl hydrolase family 92 C0L90_15845 PF17678 Glycosyl hydrolase family 92 N-terminal domain C0L90_15855 PF01301 Glycosyl hydrolases family 35 C0L90_15890 PF03932 CutC family C0L90_15895 PF01112 Asparaginase C0L90_15905 PF12034 Domain of unknown function (DUF3520) C0L90_15905 PF12450 von Willebrand factor C0L90_15905 PF00092 von Willebrand factor type A domain C0L90_15915 PF13302 Acetyltransferase (GNAT) domain C0L90_15930 PF01627 Hpt domain C0L90_15930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_15930 PF01584 CheW-like domain C0L90_15930 PF00072 Response regulator receiver domain C0L90_15935 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term C0L90_15935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0L90_15940 PF01584 CheW-like domain C0L90_15945 PF00072 Response regulator receiver domain C0L90_15950 PF00072 Response regulator receiver domain C0L90_15955 PF02951 Prokaryotic glutathione synthetase, N-terminal domain C0L90_15955 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain C0L90_15965 PF03747 ADP-ribosylglycohydrolase C0L90_15970 PF00814 Glycoprotease family C0L90_15975 PF04851 Type III restriction enzyme, res subunit C0L90_15975 PF13307 Helicase C-terminal domain C0L90_15985 PF00905 Penicillin binding protein transpeptidase domain C0L90_15985 PF14814 Bifunctional transglycosylase second domain C0L90_15985 PF00912 Transglycosylase C0L90_15990 PF00535 Glycosyl transferase family 2 C0L90_16000 PF02824 TGS domain C0L90_16000 PF04607 Region found in RelA / SpoT proteins C0L90_16000 PF13291 ACT domain C0L90_16005 PF08042 PqqA family C0L90_16010 PF12706 Beta-lactamase superfamily domain C0L90_16015 PF03070 TENA/THI-4/PQQC family C0L90_16020 PF05402 Coenzyme PQQ synthesis protein D (PqqD) C0L90_16025 PF04055 Radical SAM superfamily C0L90_16025 PF13186 Iron-sulfur cluster-binding domain C0L90_16050 PF00270 DEAD/DEAH box helicase C0L90_16050 PF00271 Helicase conserved C-terminal domain C0L90_16050 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold C0L90_16050 PF04408 Helicase associated domain (HA2) C0L90_16050 PF11898 Domain of unknown function (DUF3418) C0L90_16055 PF00210 Ferritin-like domain C0L90_16070 PF16124 RecQ zinc-binding C0L90_16070 PF00270 DEAD/DEAH box helicase C0L90_16070 PF09382 RQC domain C0L90_16070 PF00570 HRDC domain C0L90_16070 PF00271 Helicase conserved C-terminal domain C0L90_16085 PF01609 Transposase DDE domain C0L90_16085 PF05598 Transposase domain (DUF772) C0L90_16100 PF01479 S4 domain C0L90_16100 PF00849 RNA pseudouridylate synthase C0L90_16140 PF06508 Queuosine biosynthesis protein QueC C0L90_16150 PF04055 Radical SAM superfamily C0L90_16160 PF00691 OmpA family C0L90_16165 PF04052 TolB amino-terminal domain C0L90_16165 PF07676 WD40-like Beta Propeller Repeat C0L90_16175 PF02472 Biopolymer transport protein ExbD/TolR C0L90_16180 PF01618 MotA/TolQ/ExbB proton channel family C0L90_16185 PF03061 Thioesterase superfamily C0L90_16190 PF17864 RuvB AAA lid domain C0L90_16190 PF05491 RuvB C-terminal winged helix domain C0L90_16190 PF05496 Holliday junction DNA helicase RuvB P-loop domain C0L90_16195 PF02705 K+ potassium transporter C0L90_16200 PF01330 RuvA N terminal domain C0L90_16200 PF07499 RuvA, C-terminal domain C0L90_16205 PF02075 Crossover junction endodeoxyribonuclease RuvC C0L90_16210 PF01709 Transcriptional regulator C0L90_16225 PF02938 GAD domain C0L90_16225 PF01336 OB-fold nucleic acid binding domain C0L90_16225 PF00152 tRNA synthetases class II (D, K and N) C0L90_16240 PF07690 Major Facilitator Superfamily C0L90_16245 PF05506 Domain of unknown function (DUF756) C0L90_16245 PF04185 Phosphoesterase family C0L90_16265 PF03466 LysR substrate binding domain C0L90_16265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L90_16275 PF00005 ABC transporter C0L90_16275 PF12848 ABC transporter C0L90_16280 PF00593 TonB dependent receptor C0L90_16280 PF07715 TonB-dependent Receptor Plug Domain C0L90_16290 PF00593 TonB dependent receptor C0L90_16290 PF07715 TonB-dependent Receptor Plug Domain C0L90_16295 PF00593 TonB dependent receptor C0L90_16295 PF07715 TonB-dependent Receptor Plug Domain C0L90_16305 PF00999 Sodium/hydrogen exchanger family C0L90_16305 PF02254 TrkA-N domain C0L90_16340 PF04273 Putative phosphatase (DUF442) C0L90_16340 PF00753 Metallo-beta-lactamase superfamily C0L90_16350 PF07715 TonB-dependent Receptor Plug Domain C0L90_16350 PF07660 Secretin and TonB N terminus short domain C0L90_16350 PF00593 TonB dependent receptor C0L90_16360 PF06276 Ferric iron reductase FhuF-like transporter C0L90_16360 PF04183 IucA / IucC family C0L90_16365 PF07690 Major Facilitator Superfamily C0L90_16375 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C0L90_16375 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C0L90_16385 PF02654 Cobalamin-5-phosphate synthase C0L90_16395 PF02277 Phosphoribosyltransferase C0L90_16400 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase C0L90_16405 PF00155 Aminotransferase class I and II C0L90_16410 PF12557 Cob(I)alamin adenosyltransferase N terminal C0L90_16410 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP C0L90_16430 PF00593 TonB dependent receptor C0L90_16430 PF07715 TonB-dependent Receptor Plug Domain C0L90_16465 PF17871 AAA lid domain C0L90_16465 PF10431 C-terminal, D2-small domain, of ClpB protein C0L90_16465 PF02861 Clp amino terminal domain, pathogenicity island component C0L90_16465 PF00004 ATPase family associated with various cellular activities (AAA) C0L90_16465 PF07724 AAA domain (Cdc48 subfamily) C0L90_16470 PF01541 GIY-YIG catalytic domain C0L90_16480 PF00488 MutS domain V C0L90_16480 PF05190 MutS family domain IV C0L90_16480 PF05192 MutS domain III C0L90_16480 PF05188 MutS domain II C0L90_16480 PF01624 MutS domain I C0L90_16490 PF00141 Peroxidase C0L90_16495 PF01479 S4 domain C0L90_16500 PF01554 MatE C0L90_16510 PF01245 Ribosomal protein L19 C0L90_16515 PF01746 tRNA (Guanine-1)-methyltransferase C0L90_16520 PF05239 PRC-barrel domain C0L90_16520 PF01782 RimM N-terminal domain C0L90_16525 PF00886 Ribosomal protein S16 C0L90_16550 PF02978 Signal peptide binding domain C0L90_16550 PF02881 SRP54-type protein, helical bundle domain C0L90_16550 PF00448 SRP54-type protein, GTPase domain C0L90_16560 PF01578 Cytochrome C assembly protein C0L90_16565 PF01263 Aldose 1-epimerase C0L90_16570 PF06964 Alpha-L-arabinofuranosidase C-terminal domain C0L90_16585 PF00512 His Kinase A (phospho-acceptor) domain C0L90_16585 PF00072 Response regulator receiver domain C0L90_16585 PF13188 PAS domain C0L90_16585 PF08448 PAS fold C0L90_16585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_16590 PF00072 Response regulator receiver domain C0L90_16590 PF00512 His Kinase A (phospho-acceptor) domain C0L90_16590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_16590 PF00672 HAMP domain C0L90_16590 PF01627 Hpt domain C0L90_16590 PF17149 Periplasmic sensor domain found in signal transduction proteins C0L90_16600 PF13581 Histidine kinase-like ATPase domain C0L90_16605 PF01740 STAS domain C0L90_16610 PF08678 Rsbr N terminal C0L90_16610 PF01740 STAS domain C0L90_16620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_16620 PF00183 Hsp90 protein C0L90_16625 PF12833 Helix-turn-helix domain C0L90_16645 PF18073 Rubredoxin metal binding domain C0L90_16680 PF05593 RHS Repeat C0L90_16680 PF14220 Domain of unknown function (DUF4329) C0L90_16680 PF03527 RHS protein C0L90_16690 PF05593 RHS Repeat C0L90_16690 PF03527 RHS protein C0L90_16690 PF14220 Domain of unknown function (DUF4329) C0L90_16700 PF04717 Type VI secretion system, phage-baseplate injector C0L90_16710 PF03626 Prokaryotic Cytochrome C oxidase subunit IV C0L90_16715 PF00510 Cytochrome c oxidase subunit III C0L90_16720 PF00115 Cytochrome C and Quinol oxidase polypeptide I C0L90_16725 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C0L90_16725 PF06481 COX Aromatic Rich Motif C0L90_16735 PF02401 LytB protein C0L90_16740 PF01252 Signal peptidase (SPase) II C0L90_16745 PF08264 Anticodon-binding domain of tRNA C0L90_16745 PF00133 tRNA synthetases class I (I, L, M and V) C0L90_16745 PF06827 Zinc finger found in FPG and IleRS C0L90_16755 PF03023 Lipid II flippase MurJ C0L90_16760 PF01649 Ribosomal protein S20 C0L90_16765 PF01926 50S ribosome-binding GTPase C0L90_16765 PF01018 GTP1/OBG C0L90_16770 PF01016 Ribosomal L27 protein C0L90_16775 PF00829 Ribosomal prokaryotic L21 protein C0L90_16780 PF00005 ABC transporter C0L90_16780 PF17760 UvrA interaction domain C0L90_16780 PF17755 UvrA DNA-binding domain C0L90_16795 PF00378 Enoyl-CoA hydratase/isomerase C0L90_16810 PF08281 Sigma-70, region 4 C0L90_16810 PF04542 Sigma-70 region 2 C0L90_16825 PF04377 Arginine-tRNA-protein transferase, C terminus C0L90_16825 PF04376 Arginine-tRNA-protein transferase, N terminus C0L90_16855 PF00593 TonB dependent receptor C0L90_16855 PF07715 TonB-dependent Receptor Plug Domain C0L90_16865 PF02358 Trehalose-phosphatase C0L90_16870 PF00723 Glycosyl hydrolases family 15 C0L90_16875 PF00982 Glycosyltransferase family 20 C0L90_16880 PF01011 PQQ enzyme repeat C0L90_16905 PF00849 RNA pseudouridylate synthase C0L90_16910 PF13525 Outer membrane lipoprotein C0L90_16915 PF00795 Carbon-nitrogen hydrolase C0L90_16915 PF02540 NAD synthase C0L90_16930 PF00549 CoA-ligase C0L90_16930 PF02629 CoA binding domain C0L90_16935 PF08442 ATP-grasp domain C0L90_16935 PF00549 CoA-ligase C0L90_16940 PF00512 His Kinase A (phospho-acceptor) domain C0L90_16940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_16945 PF00072 Response regulator receiver domain C0L90_16945 PF02954 Bacterial regulatory protein, Fis family C0L90_16945 PF00158 Sigma-54 interaction domain C0L90_16955 PF02661 Fic/DOC family C0L90_16960 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C0L90_16960 PF00437 Type II/IV secretion system protein C0L90_16975 PF08019 Phosphoethanolamine transferase EptA/EptB C0L90_16975 PF00884 Sulfatase C0L90_16980 PF00114 Pilin (bacterial filament) C0L90_16980 PF07963 Prokaryotic N-terminal methylation motif C0L90_16985 PF00482 Type II secretion system (T2SS), protein F C0L90_16990 PF01478 Type IV leader peptidase family C0L90_16990 PF06750 Bacterial Peptidase A24 N-terminal domain C0L90_16995 PF01121 Dephospho-CoA kinase C0L90_17000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_17000 PF00512 His Kinase A (phospho-acceptor) domain C0L90_17000 PF00672 HAMP domain C0L90_17005 PF00072 Response regulator receiver domain C0L90_17005 PF00486 Transcriptional regulatory protein, C terminal C0L90_17015 PF18030 RimK PreATP-grasp domain C0L90_17015 PF08443 RimK-like ATP-grasp domain C0L90_17020 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C0L90_17020 PF00128 Alpha amylase, catalytic domain C0L90_17025 PF01609 Transposase DDE domain C0L90_17025 PF05598 Transposase domain (DUF772) C0L90_17040 PF01609 Transposase DDE domain C0L90_17040 PF05598 Transposase domain (DUF772) C0L90_17045 PF05598 Transposase domain (DUF772) C0L90_17055 PF13276 HTH-like domain C0L90_17055 PF13683 Integrase core domain C0L90_17065 PF01609 Transposase DDE domain C0L90_17065 PF05598 Transposase domain (DUF772) C0L90_17090 PF05690 Thiazole biosynthesis protein ThiG C0L90_17100 PF02390 Putative methyltransferase C0L90_17105 PF02080 TrkA-C domain C0L90_17105 PF03600 Citrate transporter C0L90_17130 PF01557 Fumarylacetoacetate (FAA) hydrolase family C0L90_17135 PF01741 Large-conductance mechanosensitive channel, MscL C0L90_17170 PF08032 RNA 2'-O ribose methyltransferase substrate binding C0L90_17170 PF00588 SpoU rRNA Methylase family C0L90_17180 PF11838 ERAP1-like C-terminal domain C0L90_17180 PF01433 Peptidase family M1 domain C0L90_17185 PF00873 AcrB/AcrD/AcrF family C0L90_17190 PF00529 HlyD membrane-fusion protein of T1SS C0L90_17190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C0L90_17195 PF00009 Elongation factor Tu GTP binding domain C0L90_17200 PF01507 Phosphoadenosine phosphosulfate reductase family C0L90_17205 PF00258 Flavodoxin C0L90_17205 PF00175 Oxidoreductase NAD-binding domain C0L90_17205 PF00667 FAD binding domain C0L90_17210 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C0L90_17210 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C0L90_17215 PF01507 Phosphoadenosine phosphosulfate reductase family C0L90_17235 PF00512 His Kinase A (phospho-acceptor) domain C0L90_17235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_17235 PF00672 HAMP domain C0L90_17235 PF00072 Response regulator receiver domain C0L90_17235 PF01627 Hpt domain C0L90_17260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L90_17260 PF03466 LysR substrate binding domain C0L90_17265 PF14824 Sirohaem biosynthesis protein central C0L90_17265 PF10414 Sirohaem synthase dimerisation region C0L90_17265 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C0L90_17270 PF00291 Pyridoxal-phosphate dependent enzyme C0L90_17280 PF01661 Macro domain C0L90_17285 PF00274 Fructose-bisphosphate aldolase class-I C0L90_17295 PF02887 Pyruvate kinase, alpha/beta domain C0L90_17295 PF00224 Pyruvate kinase, barrel domain C0L90_17305 PF00162 Phosphoglycerate kinase C0L90_17325 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C0L90_17325 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C0L90_17340 PF00753 Metallo-beta-lactamase superfamily C0L90_17340 PF04273 Putative phosphatase (DUF442) C0L90_17350 PF00528 Binding-protein-dependent transport system inner membrane component C0L90_17355 PF03459 TOBE domain C0L90_17355 PF00005 ABC transporter C0L90_17375 PF08521 Two-component sensor kinase N-terminal C0L90_17375 PF00512 His Kinase A (phospho-acceptor) domain C0L90_17375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_17380 PF00486 Transcriptional regulatory protein, C terminal C0L90_17380 PF00072 Response regulator receiver domain C0L90_17400 PF00501 AMP-binding enzyme C0L90_17425 PF03734 L,D-transpeptidase catalytic domain C0L90_17425 PF01476 LysM domain C0L90_17430 PF04225 Opacity-associated protein A LysM-like domain C0L90_17430 PF01551 Peptidase family M23 C0L90_17445 PF00456 Transketolase, thiamine diphosphate binding domain C0L90_17445 PF02779 Transketolase, pyrimidine binding domain C0L90_17445 PF02780 Transketolase, C-terminal domain C0L90_17450 PF00375 Sodium:dicarboxylate symporter family C0L90_17470 PF07584 Aerotolerance regulator N-terminal C0L90_17470 PF00092 von Willebrand factor type A domain C0L90_17490 PF07726 ATPase family associated with various cellular activities (AAA) C0L90_17490 PF17863 AAA lid domain C0L90_17500 PF03958 Bacterial type II/III secretion system short domain C0L90_17500 PF07660 Secretin and TonB N terminus short domain C0L90_17500 PF00263 Bacterial type II and III secretion system protein C0L90_17500 PF11741 AMIN domain C0L90_17525 PF17092 Penicillin-binding protein OB-like domain C0L90_17525 PF00905 Penicillin binding protein transpeptidase domain C0L90_17525 PF00912 Transglycosylase C0L90_17530 PF05598 Transposase domain (DUF772) C0L90_17545 PF00285 Citrate synthase, C-terminal domain C0L90_17550 PF01197 Ribosomal protein L31 C0L90_17555 PF01156 Inosine-uridine preferring nucleoside hydrolase C0L90_17560 PF17191 RecG wedge domain C0L90_17560 PF00271 Helicase conserved C-terminal domain C0L90_17560 PF00270 DEAD/DEAH box helicase C0L90_17565 PF01042 Endoribonuclease L-PSP C0L90_17570 PF02824 TGS domain C0L90_17570 PF04607 Region found in RelA / SpoT proteins C0L90_17570 PF13291 ACT domain C0L90_17575 PF01192 RNA polymerase Rpb6 C0L90_17585 PF00625 Guanylate kinase C0L90_17590 PF03755 YicC-like family, N-terminal region C0L90_17590 PF08340 Domain of unknown function (DUF1732) C0L90_17595 PF01138 3' exoribonuclease family, domain 1 C0L90_17595 PF03725 3' exoribonuclease family, domain 2 C0L90_17605 PF01725 Ham1 family C0L90_17610 PF04055 Radical SAM superfamily C0L90_17610 PF06969 HemN C-terminal domain C0L90_17625 PF00557 Metallopeptidase family M24 C0L90_17640 PF05195 Aminopeptidase P, N-terminal domain C0L90_17640 PF00557 Metallopeptidase family M24 C0L90_17645 PF03695 Uncharacterised protein family (UPF0149) C0L90_17655 PF05164 Cell division protein ZapA C0L90_17675 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C0L90_17685 PF13369 Transglutaminase-like superfamily C0L90_17690 PF00301 Rubredoxin C0L90_17695 PF02581 Thiamine monophosphate synthase C0L90_17705 PF00202 Aminotransferase class-III C0L90_17715 PF17874 MalT-like TPR region C0L90_17715 PF00196 Bacterial regulatory proteins, luxR family C0L90_17720 PF00127 Copper binding proteins, plastocyanin/azurin family C0L90_17760 PF00202 Aminotransferase class-III C0L90_17785 PF01569 PAP2 superfamily C0L90_17800 PF01062 Bestrophin, RFP-TM, chloride channel C0L90_17810 PF08245 Mur ligase middle domain C0L90_17810 PF01225 Mur ligase family, catalytic domain C0L90_17810 PF02875 Mur ligase family, glutamate ligase domain C0L90_17820 PF00365 Phosphofructokinase C0L90_17825 PF05598 Transposase domain (DUF772) C0L90_17825 PF01609 Transposase DDE domain C0L90_17840 PF03030 Inorganic H+ pyrophosphatase C0L90_17850 PF00719 Inorganic pyrophosphatase C0L90_17865 PF07715 TonB-dependent Receptor Plug Domain C0L90_17865 PF00593 TonB dependent receptor C0L90_17870 PF12833 Helix-turn-helix domain C0L90_17875 PF00486 Transcriptional regulatory protein, C terminal C0L90_17875 PF18500 CadC C-terminal domain 1 C0L90_17880 PF01964 Radical SAM ThiC family C0L90_17880 PF13667 ThiC-associated domain C0L90_17890 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C0L90_17890 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C0L90_17895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C0L90_17895 PF00205 Thiamine pyrophosphate enzyme, central domain C0L90_17895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C0L90_17905 PF00291 Pyridoxal-phosphate dependent enzyme C0L90_17910 PF00682 HMGL-like C0L90_17910 PF08502 LeuA allosteric (dimerisation) domain C0L90_17915 PF00180 Isocitrate/isopropylmalate dehydrogenase C0L90_17920 PF08241 Methyltransferase domain C0L90_17925 PF00694 Aconitase C-terminal domain C0L90_17930 PF00330 Aconitase family (aconitate hydratase) C0L90_17935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L90_17955 PF02321 Outer membrane efflux protein C0L90_17960 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) C0L90_17965 PF03279 Bacterial lipid A biosynthesis acyltransferase C0L90_17985 PF01609 Transposase DDE domain C0L90_17985 PF05598 Transposase domain (DUF772) C0L90_17995 PF13936 Helix-turn-helix domain C0L90_17995 PF00665 Integrase core domain C0L90_18000 PF00664 ABC transporter transmembrane region C0L90_18000 PF03412 Peptidase C39 family C0L90_18000 PF00005 ABC transporter C0L90_18035 PF05598 Transposase domain (DUF772) C0L90_18060 PF01609 Transposase DDE domain C0L90_18060 PF05598 Transposase domain (DUF772) C0L90_18075 PF01515 Phosphate acetyl/butaryl transferase C0L90_18075 PF03949 Malic enzyme, NAD binding domain C0L90_18075 PF00390 Malic enzyme, N-terminal domain C0L90_18080 PF00375 Sodium:dicarboxylate symporter family C0L90_18095 PF00512 His Kinase A (phospho-acceptor) domain C0L90_18095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_18100 PF07690 Major Facilitator Superfamily C0L90_18110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L90_18110 PF03466 LysR substrate binding domain C0L90_18130 PF00072 Response regulator receiver domain C0L90_18130 PF00196 Bacterial regulatory proteins, luxR family C0L90_18140 PF00512 His Kinase A (phospho-acceptor) domain C0L90_18140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_18140 PF08521 Two-component sensor kinase N-terminal C0L90_18145 PF00486 Transcriptional regulatory protein, C terminal C0L90_18145 PF00072 Response regulator receiver domain C0L90_18160 PF03600 Citrate transporter C0L90_18165 PF00106 short chain dehydrogenase C0L90_18175 PF00356 Bacterial regulatory proteins, lacI family C0L90_18180 PF05598 Transposase domain (DUF772) C0L90_18195 PF00128 Alpha amylase, catalytic domain C0L90_18210 PF03193 RsgA GTPase C0L90_18215 PF00155 Aminotransferase class I and II C0L90_18235 PF01522 Polysaccharide deacetylase C0L90_18240 PF00462 Glutaredoxin C0L90_18260 PF01979 Amidohydrolase family C0L90_18310 PF01327 Polypeptide deformylase C0L90_18315 PF05598 Transposase domain (DUF772) C0L90_18315 PF01609 Transposase DDE domain C0L90_18320 PF03960 ArsC family C0L90_18350 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C0L90_18350 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C0L90_18395 PF00593 TonB dependent receptor C0L90_18395 PF07715 TonB-dependent Receptor Plug Domain C0L90_18410 PF07702 UTRA domain C0L90_18410 PF00392 Bacterial regulatory proteins, gntR family C0L90_18425 PF00263 Bacterial type II and III secretion system protein C0L90_18425 PF03958 Bacterial type II/III secretion system short domain C0L90_18435 PF10741 Type II secretion system (T2SS), protein M subtype b C0L90_18440 PF05137 Fimbrial assembly protein (PilN) C0L90_18445 PF03934 Type II secretion system (T2SS), protein K C0L90_18455 PF07963 Prokaryotic N-terminal methylation motif C0L90_18460 PF12019 Type II transport protein GspH C0L90_18465 PF08334 Type II secretion system (T2SS), protein G C0L90_18470 PF00482 Type II secretion system (T2SS), protein F C0L90_18480 PF00437 Type II/IV secretion system protein C0L90_18480 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C0L90_18485 PF00082 Subtilase family C0L90_18485 PF04151 Bacterial pre-peptidase C-terminal domain C0L90_18490 PF05662 Coiled stalk of trimeric autotransporter adhesin C0L90_18490 PF05658 Head domain of trimeric autotransporter adhesin C0L90_18490 PF03895 YadA-like membrane anchor domain C0L90_18490 PF13018 Extended Signal Peptide of Type V secretion system C0L90_18500 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal C0L90_18500 PF02769 AIR synthase related protein, C-terminal domain C0L90_18500 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C0L90_18510 PF13098 Thioredoxin-like domain C0L90_18510 PF10411 Disulfide bond isomerase protein N-terminus C0L90_18515 PF00589 Phage integrase family C0L90_18515 PF02899 Phage integrase, N-terminal SAM-like domain C0L90_18530 PF03739 Lipopolysaccharide export system permease LptF/LptG C0L90_18540 PF02789 Cytosol aminopeptidase family, N-terminal domain C0L90_18540 PF00883 Cytosol aminopeptidase family, catalytic domain C0L90_18565 PF00133 tRNA synthetases class I (I, L, M and V) C0L90_18565 PF08264 Anticodon-binding domain of tRNA C0L90_18565 PF10458 Valyl tRNA synthetase tRNA binding arm C0L90_18575 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain C0L90_18575 PF01464 Transglycosylase SLT domain C0L90_18585 PF05598 Transposase domain (DUF772) C0L90_18595 PF00665 Integrase core domain C0L90_18595 PF13936 Helix-turn-helix domain C0L90_18605 PF00665 Integrase core domain C0L90_18605 PF13936 Helix-turn-helix domain C0L90_18630 PF01066 CDP-alcohol phosphatidyltransferase C0L90_18640 PF03129 Anticodon binding domain C0L90_18640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C0L90_18640 PF04073 Aminoacyl-tRNA editing domain C0L90_18645 PF00816 H-NS histone family C0L90_18655 PF02405 Permease MlaE C0L90_18660 PF00005 ABC transporter C0L90_18665 PF02470 MlaD protein C0L90_18665 PF03886 ABC-type transport auxiliary lipoprotein component C0L90_18695 PF14307 Glycosyltransferase WbsX C0L90_18695 PF05045 Rhamnan synthesis protein F C0L90_18700 PF01144 Coenzyme A transferase C0L90_18705 PF01144 Coenzyme A transferase C0L90_18710 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C0L90_18710 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C0L90_18710 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C0L90_18710 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C0L90_18715 PF00483 Nucleotidyl transferase C0L90_18715 PF01050 Mannose-6-phosphate isomerase C0L90_18720 PF04321 RmlD substrate binding domain C0L90_18725 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase C0L90_18730 PF00483 Nucleotidyl transferase C0L90_18735 PF16363 GDP-mannose 4,6 dehydratase C0L90_18745 PF01012 Electron transfer flavoprotein domain C0L90_18750 PF01012 Electron transfer flavoprotein domain C0L90_18750 PF00766 Electron transfer flavoprotein FAD-binding domain C0L90_18760 PF00005 ABC transporter C0L90_18770 PF05598 Transposase domain (DUF772) C0L90_18805 PF01370 NAD dependent epimerase/dehydratase family C0L90_18815 PF01053 Cys/Met metabolism PLP-dependent enzyme C0L90_18820 PF00571 CBS domain C0L90_18820 PF00291 Pyridoxal-phosphate dependent enzyme C0L90_18840 PF00437 Type II/IV secretion system protein C0L90_18845 PF02798 Glutathione S-transferase, N-terminal domain C0L90_18845 PF14497 Glutathione S-transferase, C-terminal domain C0L90_18860 PF00271 Helicase conserved C-terminal domain C0L90_18860 PF00270 DEAD/DEAH box helicase C0L90_18870 PF01242 6-pyruvoyl tetrahydropterin synthase C0L90_18885 PF13185 GAF domain C0L90_18895 PF13419 Haloacid dehalogenase-like hydrolase C0L90_18900 PF11799 impB/mucB/samB family C-terminal domain C0L90_18900 PF00817 impB/mucB/samB family C0L90_18910 PF07977 FabA-like domain C0L90_18915 PF02801 Beta-ketoacyl synthase, C-terminal domain C0L90_18915 PF00109 Beta-ketoacyl synthase, N-terminal domain C0L90_18925 PF01432 Peptidase family M3 C0L90_18940 PF07731 Multicopper oxidase C0L90_18940 PF07732 Multicopper oxidase C0L90_18940 PF00394 Multicopper oxidase C0L90_18945 PF05275 Copper resistance protein B precursor (CopB) C0L90_18950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C0L90_18975 PF01380 SIS domain C0L90_19020 PF00132 Bacterial transferase hexapeptide (six repeats) C0L90_19020 PF12804 MobA-like NTP transferase domain C0L90_19020 PF14602 Hexapeptide repeat of succinyl-transferase C0L90_19035 PF01817 Chorismate mutase type II C0L90_19040 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C0L90_19045 PF02874 ATP synthase alpha/beta family, beta-barrel domain C0L90_19045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C0L90_19050 PF00231 ATP synthase C0L90_19055 PF02874 ATP synthase alpha/beta family, beta-barrel domain C0L90_19055 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C0L90_19055 PF00306 ATP synthase alpha/beta chain, C terminal domain C0L90_19060 PF00213 ATP synthase delta (OSCP) subunit C0L90_19065 PF00430 ATP synthase B/B' CF(0) C0L90_19070 PF00137 ATP synthase subunit C C0L90_19075 PF00119 ATP synthase A chain C0L90_19095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C0L90_19095 PF07992 Pyridine nucleotide-disulphide oxidoreductase C0L90_19105 PF00364 Biotin-requiring enzyme C0L90_19105 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C0L90_19105 PF02817 e3 binding domain C0L90_19135 PF03180 NLPA lipoprotein C0L90_19140 PF00528 Binding-protein-dependent transport system inner membrane component C0L90_19145 PF00005 ABC transporter C0L90_19145 PF09383 NIL domain C0L90_19150 PF00892 EamA-like transporter family C0L90_19155 PF04461 Protein of unknown function (DUF520) C0L90_19190 PF13419 Haloacid dehalogenase-like hydrolase C0L90_19195 PF01479 S4 domain C0L90_19195 PF00849 RNA pseudouridylate synthase C0L90_19200 PF05175 Methyltransferase small domain C0L90_19200 PF08468 Methyltransferase small domain N-terminal C0L90_19215 PF07995 Glucose / Sorbosone dehydrogenase C0L90_19230 PF00989 PAS fold C0L90_19230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_19230 PF00512 His Kinase A (phospho-acceptor) domain C0L90_19250 PF00842 Alanine racemase, C-terminal domain C0L90_19250 PF01168 Alanine racemase, N-terminal domain C0L90_19255 PF01266 FAD dependent oxidoreductase C0L90_19260 PF01037 Lrp/AsnC ligand binding domain C0L90_19270 PF01641 SelR domain C0L90_19280 PF01618 MotA/TolQ/ExbB proton channel family C0L90_19285 PF13677 Membrane MotB of proton-channel complex MotA/MotB C0L90_19285 PF00691 OmpA family C0L90_19305 PF00486 Transcriptional regulatory protein, C terminal C0L90_19305 PF00072 Response regulator receiver domain C0L90_19310 PF00512 His Kinase A (phospho-acceptor) domain C0L90_19310 PF13188 PAS domain C0L90_19310 PF08448 PAS fold C0L90_19310 PF00072 Response regulator receiver domain C0L90_19310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_19320 PF04151 Bacterial pre-peptidase C-terminal domain C0L90_19320 PF00082 Subtilase family C0L90_19335 PF01061 ABC-2 type transporter C0L90_19340 PF00005 ABC transporter C0L90_19345 PF00999 Sodium/hydrogen exchanger family C0L90_19355 PF02469 Fasciclin domain C0L90_19365 PF03167 Uracil DNA glycosylase superfamily C0L90_19375 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C0L90_19385 PF03358 NADPH-dependent FMN reductase C0L90_19405 PF01431 Peptidase family M13 C0L90_19405 PF05649 Peptidase family M13 C0L90_19425 PF13520 Amino acid permease C0L90_19435 PF00072 Response regulator receiver domain C0L90_19435 PF04397 LytTr DNA-binding domain C0L90_19450 PF05974 Domain of unknown function (DUF892) C0L90_19455 PF05067 Manganese containing catalase C0L90_19470 PF03705 CheR methyltransferase, all-alpha domain C0L90_19470 PF01739 CheR methyltransferase, SAM binding domain C0L90_19470 PF08448 PAS fold C0L90_19470 PF01339 CheB methylesterase C0L90_19480 PF01609 Transposase DDE domain C0L90_19480 PF05598 Transposase domain (DUF772) C0L90_19495 PF02954 Bacterial regulatory protein, Fis family C0L90_19495 PF00072 Response regulator receiver domain C0L90_19495 PF00158 Sigma-54 interaction domain C0L90_19510 PF01654 Cytochrome bd terminal oxidase subunit I C0L90_19515 PF02322 Cytochrome bd terminal oxidase subunit II C0L90_19550 PF08240 Alcohol dehydrogenase GroES-like domain C0L90_19550 PF00107 Zinc-binding dehydrogenase C0L90_19550 PF13823 Alcohol dehydrogenase GroES-associated C0L90_19590 PF07715 TonB-dependent Receptor Plug Domain C0L90_19590 PF00593 TonB dependent receptor C0L90_19605 PF00005 ABC transporter C0L90_19625 PF03971 Monomeric isocitrate dehydrogenase C0L90_19645 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term C0L90_19645 PF14489 QueF-like protein C0L90_19655 PF07687 Peptidase dimerisation domain C0L90_19655 PF01546 Peptidase family M20/M25/M40 C0L90_19660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C0L90_19665 PF00873 AcrB/AcrD/AcrF family C0L90_19670 PF00873 AcrB/AcrD/AcrF family C0L90_19690 PF07063 Domain of unknown function (DUF1338) C0L90_19740 PF01510 N-acetylmuramoyl-L-alanine amidase C0L90_19750 PF13378 Enolase C-terminal domain-like C0L90_19750 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C0L90_19775 PF13520 Amino acid permease C0L90_19795 PF05360 yiaA/B two helix domain C0L90_19800 PF07995 Glucose / Sorbosone dehydrogenase C0L90_19815 PF14310 Fibronectin type III-like domain C0L90_19815 PF00933 Glycosyl hydrolase family 3 N terminal domain C0L90_19815 PF01915 Glycosyl hydrolase family 3 C-terminal domain C0L90_19820 PF02152 Dihydroneopterin aldolase C0L90_19825 PF00814 Glycoprotease family C0L90_19830 PF01165 Ribosomal protein S21 C0L90_19835 PF09424 Yqey-like protein C0L90_19855 PF03631 Virulence factor BrkB C0L90_19860 PF10410 DnaB-helicase binding domain of primase C0L90_19860 PF08278 DNA primase DnaG DnaB-binding C0L90_19860 PF08275 DNA primase catalytic core, N-terminal domain C0L90_19860 PF01807 CHC2 zinc finger C0L90_19870 PF13593 SBF-like CPA transporter family (DUF4137) C0L90_19890 PF01040 UbiA prenyltransferase family C0L90_19915 PF00510 Cytochrome c oxidase subunit III C0L90_19920 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 C0L90_19930 PF00115 Cytochrome C and Quinol oxidase polypeptide I C0L90_19935 PF02790 Cytochrome C oxidase subunit II, transmembrane domain C0L90_19935 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C0L90_19945 PF01619 Proline dehydrogenase C0L90_19945 PF00171 Aldehyde dehydrogenase family C0L90_19945 PF14850 DNA-binding domain of Proline dehydrogenase C0L90_19945 PF18327 Proline utilization A proline dehydrogenase N-terminal domain C0L90_19955 PF05598 Transposase domain (DUF772) C0L90_19995 PF00579 tRNA synthetases class I (W and Y) C0L90_20000 PF04225 Opacity-associated protein A LysM-like domain C0L90_20000 PF01551 Peptidase family M23 C0L90_20005 PF03702 Anhydro-N-acetylmuramic acid kinase C0L90_20015 PF07690 Major Facilitator Superfamily C0L90_20020 PF03372 Endonuclease/Exonuclease/phosphatase family C0L90_20025 PF00156 Phosphoribosyl transferase domain C0L90_20035 PF13614 AAA domain C0L90_20040 PF02195 ParB-like nuclease domain C0L90_20040 PF17762 HTH domain found in ParB protein C0L90_20050 PF01370 NAD dependent epimerase/dehydratase family C0L90_20055 PF00535 Glycosyl transferase family 2 C0L90_20070 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C0L90_20070 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C0L90_20070 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C0L90_20070 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C0L90_20075 PF00692 dUTPase C0L90_20080 PF02441 Flavoprotein C0L90_20080 PF04127 DNA / pantothenate metabolism flavoprotein C0L90_20085 PF04002 RadC-like JAB domain C0L90_20090 PF03485 Arginyl tRNA synthetase N terminal domain C0L90_20090 PF05746 DALR anticodon binding domain C0L90_20090 PF00750 tRNA synthetases class I (R) C0L90_20105 PF00106 short chain dehydrogenase C0L90_20115 PF03377 TAL effector repeat C0L90_20145 PF17944 Arginine decarboxylase C-terminal helical extension C0L90_20145 PF17810 Arginine decarboxylase helical bundle domain C0L90_20145 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C0L90_20150 PF17284 Spermidine synthase tetramerisation domain C0L90_20185 PF00543 Nitrogen regulatory protein P-II C0L90_20190 PF04380 Membrane fusogenic activity C0L90_20195 PF13335 Magnesium chelatase, subunit ChlI C-terminal C0L90_20195 PF01078 Magnesium chelatase, subunit ChlI C0L90_20220 PF12792 CSS motif domain associated with EAL C0L90_20220 PF00563 EAL domain C0L90_20225 PF00487 Fatty acid desaturase C0L90_20230 PF00111 2Fe-2S iron-sulfur cluster binding domain C0L90_20230 PF00970 Oxidoreductase FAD-binding domain C0L90_20230 PF00175 Oxidoreductase NAD-binding domain C0L90_20235 PF00440 Bacterial regulatory proteins, tetR family C0L90_20240 PF05598 Transposase domain (DUF772) C0L90_20240 PF01609 Transposase DDE domain C0L90_20295 PF08338 Domain of unknown function (DUF1731) C0L90_20295 PF01370 NAD dependent epimerase/dehydratase family C0L90_20305 PF08521 Two-component sensor kinase N-terminal C0L90_20305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_20305 PF00512 His Kinase A (phospho-acceptor) domain C0L90_20320 PF00595 PDZ domain C0L90_20345 PF01594 AI-2E family transporter C0L90_20355 PF02789 Cytosol aminopeptidase family, N-terminal domain C0L90_20355 PF00883 Cytosol aminopeptidase family, catalytic domain C0L90_20365 PF04542 Sigma-70 region 2 C0L90_20365 PF08281 Sigma-70, region 4 C0L90_20370 PF00199 Catalase C0L90_20390 PF00892 EamA-like transporter family C0L90_20395 PF00892 EamA-like transporter family C0L90_20420 PF00753 Metallo-beta-lactamase superfamily C0L90_20425 PF00579 tRNA synthetases class I (W and Y) C0L90_20430 PF05532 CsbD-like C0L90_20445 PF00491 Arginase family C0L90_20465 PF02223 Thymidylate kinase C0L90_20480 PF03309 Type III pantothenate kinase C0L90_20485 PF08279 HTH domain C0L90_20485 PF02237 Biotin protein ligase C terminal domain C0L90_20485 PF03099 Biotin/lipoate A/B protein ligase family C0L90_20495 PF06167 Glucose-regulated metallo-peptidase M90 C0L90_20510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_20510 PF00512 His Kinase A (phospho-acceptor) domain C0L90_20510 PF00672 HAMP domain C0L90_20515 PF00486 Transcriptional regulatory protein, C terminal C0L90_20515 PF00072 Response regulator receiver domain C0L90_20525 PF01207 Dihydrouridine synthase (Dus) C0L90_20540 PF03377 TAL effector repeat C0L90_20575 PF00199 Catalase C0L90_20575 PF06628 Catalase-related immune-responsive C0L90_20580 PF05598 Transposase domain (DUF772) C0L90_20580 PF01609 Transposase DDE domain C0L90_20585 PF13533 Biotin-lipoyl like C0L90_20600 PF06733 DEAD_2 C0L90_20600 PF13307 Helicase C-terminal domain C0L90_20615 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C0L90_20615 PF08501 Shikimate dehydrogenase substrate binding domain C0L90_20615 PF01488 Shikimate / quinate 5-dehydrogenase C0L90_20635 PF00258 Flavodoxin C0L90_20635 PF00175 Oxidoreductase NAD-binding domain C0L90_20635 PF00667 FAD binding domain C0L90_20645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L90_20645 PF03466 LysR substrate binding domain C0L90_20660 PF00490 Delta-aminolevulinic acid dehydratase C0L90_20685 PF00326 Prolyl oligopeptidase family C0L90_20685 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region C0L90_20695 PF00043 Glutathione S-transferase, C-terminal domain C0L90_20695 PF02798 Glutathione S-transferase, N-terminal domain C0L90_20705 PF13936 Helix-turn-helix domain C0L90_20705 PF00665 Integrase core domain C0L90_20730 PF00005 ABC transporter C0L90_20740 PF01381 Helix-turn-helix C0L90_20755 PF02583 Metal-sensitive transcriptional repressor C0L90_20760 PF01545 Cation efflux family C0L90_20765 PF01383 CpcD/allophycocyanin linker domain C0L90_20765 PF00175 Oxidoreductase NAD-binding domain C0L90_20770 PF00005 ABC transporter C0L90_20775 PF01061 ABC-2 type transporter C0L90_20785 PF02558 Ketopantoate reductase PanE/ApbA C0L90_20785 PF08546 Ketopantoate reductase PanE/ApbA C terminal C0L90_20820 PF13406 Transglycosylase SLT domain C0L90_20835 PF02463 RecF/RecN/SMC N terminal domain C0L90_20835 PF06470 SMC proteins Flexible Hinge Domain C0L90_20840 PF00268 Ribonucleotide reductase, small chain C0L90_20850 PF02867 Ribonucleotide reductase, barrel domain C0L90_20850 PF03477 ATP cone domain C0L90_20850 PF00317 Ribonucleotide reductase, all-alpha domain C0L90_20865 PF13380 CoA binding domain C0L90_20865 PF13607 Succinyl-CoA ligase like flavodoxin domain C0L90_20865 PF00583 Acetyltransferase (GNAT) family C0L90_20875 PF01769 Divalent cation transporter C0L90_20875 PF00571 CBS domain C0L90_20875 PF03448 MgtE intracellular N domain C0L90_20885 PF00999 Sodium/hydrogen exchanger family C0L90_20885 PF02254 TrkA-N domain C0L90_20900 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain C0L90_20900 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain C0L90_20905 PF00723 Glycosyl hydrolases family 15 C0L90_20920 PF05166 YcgL domain C0L90_20925 PF00109 Beta-ketoacyl synthase, N-terminal domain C0L90_20925 PF02801 Beta-ketoacyl synthase, C-terminal domain C0L90_20935 PF00535 Glycosyl transferase family 2 C0L90_20980 PF07977 FabA-like domain C0L90_20985 PF01553 Acyltransferase C0L90_20995 PF00550 Phosphopantetheine attachment site C0L90_21000 PF04820 Tryptophan halogenase C0L90_21035 PF01218 Coproporphyrinogen III oxidase C0L90_21050 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C0L90_21050 PF00476 DNA polymerase family A C0L90_21050 PF01612 3'-5' exonuclease C0L90_21050 PF01367 5'-3' exonuclease, C-terminal SAM fold C0L90_21100 PF14602 Hexapeptide repeat of succinyl-transferase C0L90_21100 PF12464 Maltose acetyltransferase C0L90_21110 PF00580 UvrD/REP helicase N-terminal domain C0L90_21110 PF13361 UvrD-like helicase C-terminal domain C0L90_21130 PF13396 Phospholipase_D-nuclease N-terminal C0L90_21130 PF13091 PLD-like domain C0L90_21135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L90_21140 PF05598 Transposase domain (DUF772) C0L90_21145 PF03737 Aldolase/RraA C0L90_21160 PF04909 Amidohydrolase C0L90_21165 PF00471 Ribosomal protein L33 C0L90_21170 PF00830 Ribosomal L28 family C0L90_21190 PF02527 rRNA small subunit methyltransferase G C0L90_21195 PF09423 PhoD-like phosphatase C0L90_21195 PF16655 PhoD-like phosphatase, N-terminal domain C0L90_21200 PF16655 PhoD-like phosphatase, N-terminal domain C0L90_21200 PF09423 PhoD-like phosphatase C0L90_21205 PF01648 4'-phosphopantetheinyl transferase superfamily C0L90_21210 PF04226 Transglycosylase associated protein C0L90_21220 PF03372 Endonuclease/Exonuclease/phosphatase family C0L90_21235 PF00474 Sodium:solute symporter family C0L90_21240 PF04341 Protein of unknown function, DUF485 C0L90_21250 PF16177 Acetyl-coenzyme A synthetase N-terminus C0L90_21250 PF00501 AMP-binding enzyme C0L90_21250 PF13193 AMP-binding enzyme C-terminal domain C0L90_21255 PF00196 Bacterial regulatory proteins, luxR family C0L90_21255 PF00072 Response regulator receiver domain C0L90_21285 PF00248 Aldo/keto reductase family C0L90_21300 PF01557 Fumarylacetoacetate (FAA) hydrolase family C0L90_21310 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C0L90_21310 PF13378 Enolase C-terminal domain-like C0L90_21315 PF05336 L-rhamnose mutarotase C0L90_21320 PF07690 Major Facilitator Superfamily C0L90_21325 PF09339 IclR helix-turn-helix domain C0L90_21325 PF01614 Bacterial transcriptional regulator C0L90_21330 PF02659 Putative manganese efflux pump C0L90_21335 PF00512 His Kinase A (phospho-acceptor) domain C0L90_21335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L90_21345 PF06165 Glycosyltransferase family 36 C0L90_21345 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain C0L90_21360 PF13570 PQQ-like domain C0L90_21360 PF01011 PQQ enzyme repeat C0L90_21360 PF13360 PQQ-like domain C0L90_21395 PF01609 Transposase DDE domain C0L90_21395 PF05598 Transposase domain (DUF772) C0L90_21405 PF05598 Transposase domain (DUF772) C0L90_21405 PF01609 Transposase DDE domain C0L90_21410 PF04357 TamB, inner membrane protein subunit of TAM complex C0L90_21415 PF17243 POTRA domain TamA domain 1 C0L90_21415 PF01103 Surface antigen C0L90_21420 PF00593 TonB dependent receptor C0L90_21420 PF07715 TonB-dependent Receptor Plug Domain C0L90_21425 PF13181 Tetratricopeptide repeat C0L90_21430 PF05746 DALR anticodon binding domain C0L90_21430 PF02092 Glycyl-tRNA synthetase beta subunit C0L90_21435 PF02091 Glycyl-tRNA synthetase alpha subunit C0L90_21440 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C0L90_21440 PF00437 Type II/IV secretion system protein C0L90_21450 PF00117 Glutamine amidotransferase class-I C0L90_21450 PF00958 GMP synthase C terminal domain C0L90_21460 PF00902 Sec-independent protein translocase protein (TatC) C0L90_21465 PF02416 mttA/Hcf106 family C0L90_21470 PF02416 mttA/Hcf106 family C0L90_21480 PF00762 Ferrochelatase C0L90_21485 PF12697 Alpha/beta hydrolase family C0L90_21510 PF04381 Putative exonuclease, RdgC C0L90_21515 PF01171 PP-loop family C0L90_21535 PF00356 Bacterial regulatory proteins, lacI family C0L90_21540 PF03648 Glycosyl hydrolase family 67 N-terminus C0L90_21540 PF07477 Glycosyl hydrolase family 67 C-terminus C0L90_21540 PF07488 Glycosyl hydrolase family 67 middle domain C0L90_21550 PF13378 Enolase C-terminal domain-like C0L90_21550 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C0L90_21555 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain C0L90_21555 PF04616 Glycosyl hydrolases family 43 C0L90_21560 PF01915 Glycosyl hydrolase family 3 C-terminal domain C0L90_21560 PF07691 PA14 domain C0L90_21560 PF00933 Glycosyl hydrolase family 3 N terminal domain C0L90_21560 PF14310 Fibronectin type III-like domain C0L90_21565 PF01232 Mannitol dehydrogenase Rossmann domain C0L90_21565 PF08125 Mannitol dehydrogenase C-terminal domain C0L90_21575 PF05598 Transposase domain (DUF772) C0L90_21600 PF13936 Helix-turn-helix domain C0L90_21600 PF00665 Integrase core domain C0L90_21620 PF02614 Glucuronate isomerase C0L90_21625 PF00553 Cellulose binding domain C0L90_21625 PF00331 Glycosyl hydrolase family 10 C0L90_21625 PF03422 Carbohydrate binding module (family 6) C0L90_21655 PF04616 Glycosyl hydrolases family 43 C0L90_21665 PF05598 Transposase domain (DUF772) C0L90_21665 PF01609 Transposase DDE domain C0L90_21695 PF00698 Acyl transferase domain C0L90_21695 PF08240 Alcohol dehydrogenase GroES-like domain C0L90_21695 PF00107 Zinc-binding dehydrogenase C0L90_21695 PF16197 Ketoacyl-synthetase C-terminal extension C0L90_21695 PF00109 Beta-ketoacyl synthase, N-terminal domain C0L90_21695 PF02801 Beta-ketoacyl synthase, C-terminal domain C0L90_21695 PF08659 KR domain C0L90_21695 PF00550 Phosphopantetheine attachment site C0L90_21695 PF14765 Polyketide synthase dehydratase C0L90_21700 PF01553 Acyltransferase C0L90_21715 PF00356 Bacterial regulatory proteins, lacI family C0L90_21730 PF04820 Tryptophan halogenase C0L90_21735 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C0L90_21740 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) C0L90_21745 PF04337 Protein of unknown function, DUF480 C0L90_21760 PF00580 UvrD/REP helicase N-terminal domain C0L90_21760 PF13361 UvrD-like helicase C-terminal domain C0L90_21765 PF00265 Thymidine kinase C0L90_21775 PF04349 Periplasmic glucan biosynthesis protein, MdoG C0L90_21785 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C0L90_21785 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C0L90_21785 PF06827 Zinc finger found in FPG and IleRS C0L90_21790 PF05598 Transposase domain (DUF772) C0L90_21825 PF00360 Phytochrome region C0L90_21825 PF01590 GAF domain C0L90_21825 PF08446 PAS fold C0L90_21825 PF13426 PAS domain C0L90_21830 PF01126 Heme oxygenase C0L90_21835 PF07690 Major Facilitator Superfamily C0L90_21840 PF01263 Aldose 1-epimerase C0L90_21850 PF02810 SEC-C motif C0L90_21855 PF01925 Sulfite exporter TauE/SafE C0L90_21860 PF05598 Transposase domain (DUF772) C0L90_21890 PF02463 RecF/RecN/SMC N terminal domain C0L90_21895 PF01227 GTP cyclohydrolase I C0L90_21925 PF13936 Helix-turn-helix domain C0L90_21925 PF00665 Integrase core domain C0L90_21935 PF00083 Sugar (and other) transporter C0L90_21940 PF05598 Transposase domain (DUF772) C0L90_21950 PF13091 PLD-like domain C0L90_21950 PF13396 Phospholipase_D-nuclease N-terminal C0L90_21995 PF00085 Thioredoxin C0L90_22010 PF00293 NUDIX domain C0L90_22010 PF13344 Haloacid dehalogenase-like hydrolase C0L90_22045 PF05532 CsbD-like C0L90_22070 PF00294 pfkB family carbohydrate kinase C0L90_22080 PF07055 Enoyl reductase FAD binding domain C0L90_22080 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase C0L90_22080 PF12241 Trans-2-enoyl-CoA reductase catalytic region C0L90_22100 PF01070 FMN-dependent dehydrogenase C0L90_22115 PF05598 Transposase domain (DUF772) C0L90_22125 PF00593 TonB dependent receptor C0L90_22125 PF07715 TonB-dependent Receptor Plug Domain C0L90_22130 PF00155 Aminotransferase class I and II C0L90_22135 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain C0L90_22155 PF05598 Transposase domain (DUF772) C0L90_22165 PF01609 Transposase DDE domain C0L90_22165 PF05598 Transposase domain (DUF772) C0L90_22185 PF00005 ABC transporter C0L90_22185 PF00664 ABC transporter transmembrane region C0L90_22185 PF03412 Peptidase C39 family C0L90_22190 PF05598 Transposase domain (DUF772) C0L90_22215 PF00849 RNA pseudouridylate synthase C0L90_22230 PF01131 DNA topoisomerase C0L90_22230 PF01751 Toprim domain C0L90_22230 PF01396 Topoisomerase DNA binding C4 zinc finger C0L90_22245 PF05598 Transposase domain (DUF772) C0L90_22245 PF01609 Transposase DDE domain C0L90_22265 PF01609 Transposase DDE domain C0L90_22265 PF05598 Transposase domain (DUF772) C0L90_22290 PF05598 Transposase domain (DUF772) C0L90_22290 PF01609 Transposase DDE domain C0L90_22360 PF13538 UvrD-like helicase C-terminal domain C0L90_22365 PF13361 UvrD-like helicase C-terminal domain C0L90_22365 PF00580 UvrD/REP helicase N-terminal domain C0L90_22365 PF12705 PD-(D/E)XK nuclease superfamily C0L90_22370 PF17946 RecC C-terminal domain C0L90_22375 PF00005 ABC transporter C0L90_22385 PF01609 Transposase DDE domain C0L90_22385 PF05598 Transposase domain (DUF772) C0L90_22390 PF05598 Transposase domain (DUF772) C0L90_22390 PF01609 Transposase DDE domain C0L90_22400 PF00005 ABC transporter C0L90_22420 PF00005 ABC transporter C0L90_22425 PF02405 Permease MlaE C0L90_22430 PF02470 MlaD protein C0L90_22435 PF05494 MlaC protein C0L90_22445 PF04333 MlaA lipoprotein C0L90_22470 PF00255 Glutathione peroxidase C0L90_22480 PF02646 RmuC family C0L90_22485 PF05598 Transposase domain (DUF772) C0L90_22485 PF01609 Transposase DDE domain C0L90_22505 PF07905 Purine catabolism regulatory protein-like family C0L90_22505 PF13556 PucR C-terminal helix-turn-helix domain C0L90_22510 PF02595 Glycerate kinase family C0L90_22515 PF07690 Major Facilitator Superfamily C0L90_22530 PF17785 PUA-like domain C0L90_22530 PF10672 S-adenosylmethionine-dependent methyltransferase C0L90_22540 PF03741 Integral membrane protein TerC family C0L90_22550 PF01694 Rhomboid family C0L90_22555 PF03009 Glycerophosphoryl diester phosphodiesterase family C0L90_22565 PF01569 PAP2 superfamily C0L90_22570 PF10396 GTP-binding protein TrmE N-terminus C0L90_22570 PF12631 MnmE helical domain C0L90_22570 PF01926 50S ribosome-binding GTPase C0L90_22575 PF01522 Polysaccharide deacetylase C0L90_22580 PF02096 60Kd inner membrane protein C0L90_22580 PF14849 YidC periplasmic domain C0L90_22585 PF00825 Ribonuclease P C0L90_22590 PF00468 Ribosomal protein L34