locus-tag class description EBA00_00010 PF11638 DnaA N-terminal domain EBA00_00010 PF08299 Bacterial dnaA protein helix-turn-helix EBA00_00010 PF00308 Bacterial dnaA protein EBA00_00015 PF02767 DNA polymerase III beta subunit, central domain EBA00_00015 PF02768 DNA polymerase III beta subunit, C-terminal domain EBA00_00015 PF00712 DNA polymerase III beta subunit, N-terminal domain EBA00_00020 PF02463 RecF/RecN/SMC N terminal domain EBA00_00025 PF00204 DNA gyrase B EBA00_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_00025 PF18053 DNA gyrase B subunit insert domain EBA00_00025 PF01751 Toprim domain EBA00_00025 PF00986 DNA gyrase B subunit, carboxyl terminus EBA00_00035 PF01435 Peptidase family M48 EBA00_00045 PF03544 Gram-negative bacterial TonB protein C-terminal EBA00_00050 PF01618 MotA/TolQ/ExbB proton channel family EBA00_00055 PF02472 Biopolymer transport protein ExbD/TolR EBA00_00060 PF02472 Biopolymer transport protein ExbD/TolR EBA00_00065 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ EBA00_00090 PF05598 Transposase domain (DUF772) EBA00_00095 PF01609 Transposase DDE domain EBA00_00095 PF05598 Transposase domain (DUF772) EBA00_00110 PF04055 Radical SAM superfamily EBA00_00120 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) EBA00_00145 PF03572 Peptidase family S41 EBA00_00145 PF13180 PDZ domain EBA00_00150 PF01551 Peptidase family M23 EBA00_00160 PF04389 Peptidase family M28 EBA00_00170 PF00150 Cellulase (glycosyl hydrolase family 5) EBA00_00185 PF00150 Cellulase (glycosyl hydrolase family 5) EBA00_00195 PF00150 Cellulase (glycosyl hydrolase family 5) EBA00_00205 PF00107 Zinc-binding dehydrogenase EBA00_00205 PF08240 Alcohol dehydrogenase GroES-like domain EBA00_00230 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EBA00_00230 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA00_00235 PF01493 GXGXG motif EBA00_00235 PF00310 Glutamine amidotransferases class-II EBA00_00235 PF04898 Glutamate synthase central domain EBA00_00235 PF01645 Conserved region in glutamate synthase EBA00_00305 PF00270 DEAD/DEAH box helicase EBA00_00305 PF09369 Domain of unknown function (DUF1998) EBA00_00305 PF00271 Helicase conserved C-terminal domain EBA00_00310 PF03006 Haemolysin-III related EBA00_00340 PF00080 Copper/zinc superoxide dismutase (SODC) EBA00_00345 PF00158 Sigma-54 interaction domain EBA00_00345 PF02954 Bacterial regulatory protein, Fis family EBA00_00345 PF00072 Response regulator receiver domain EBA00_00350 PF00989 PAS fold EBA00_00350 PF00512 His Kinase A (phospho-acceptor) domain EBA00_00350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_00355 PF00909 Ammonium Transporter Family EBA00_00360 PF00543 Nitrogen regulatory protein P-II EBA00_00365 PF00120 Glutamine synthetase, catalytic domain EBA00_00365 PF03951 Glutamine synthetase, beta-Grasp domain EBA00_00370 PF02673 Bacitracin resistance protein BacA EBA00_00415 PF03061 Thioesterase superfamily EBA00_00420 PF13091 PLD-like domain EBA00_00435 PF01883 Iron-sulfur cluster assembly protein EBA00_00435 PF10609 NUBPL iron-transfer P-loop NTPase EBA00_00455 PF01381 Helix-turn-helix EBA00_00460 PF13657 HipA N-terminal domain EBA00_00460 PF07804 HipA-like C-terminal domain EBA00_00465 PF10017 Histidine-specific methyltransferase, SAM-dependent EBA00_00470 PF12867 DinB superfamily EBA00_00470 PF03781 Sulfatase-modifying factor enzyme 1 EBA00_00480 PF00528 Binding-protein-dependent transport system inner membrane component EBA00_00485 PF00005 ABC transporter EBA00_00485 PF00571 CBS domain EBA00_00500 PF00005 ABC transporter EBA00_00515 PF01734 Patatin-like phospholipase EBA00_00525 PF01037 Lrp/AsnC ligand binding domain EBA00_00530 PF00351 Biopterin-dependent aromatic amino acid hydroxylase EBA00_00560 PF00356 Bacterial regulatory proteins, lacI family EBA00_00595 PF02806 Alpha amylase, C-terminal all-beta domain EBA00_00595 PF00128 Alpha amylase, catalytic domain EBA00_00595 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EBA00_00600 PF16657 Maltogenic Amylase, C-terminal domain EBA00_00600 PF00128 Alpha amylase, catalytic domain EBA00_00605 PF00128 Alpha amylase, catalytic domain EBA00_00605 PF11896 Domain of unknown function (DUF3416) EBA00_00615 PF05598 Transposase domain (DUF772) EBA00_00615 PF01609 Transposase DDE domain EBA00_00625 PF00108 Thiolase, N-terminal domain EBA00_00625 PF02803 Thiolase, C-terminal domain EBA00_00665 PF00581 Rhodanese-like domain EBA00_00670 PF02556 Preprotein translocase subunit SecB EBA00_00675 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EBA00_00675 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EBA00_00685 PF00205 Thiamine pyrophosphate enzyme, central domain EBA00_00685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EBA00_00685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EBA00_00690 PF00512 His Kinase A (phospho-acceptor) domain EBA00_00690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_00695 PF00158 Sigma-54 interaction domain EBA00_00695 PF00072 Response regulator receiver domain EBA00_00695 PF02954 Bacterial regulatory protein, Fis family EBA00_00710 PF07690 Major Facilitator Superfamily EBA00_00715 PF01609 Transposase DDE domain EBA00_00715 PF05598 Transposase domain (DUF772) EBA00_00725 PF00588 SpoU rRNA Methylase family EBA00_00740 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EBA00_00740 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EBA00_00745 PF02661 Fic/DOC family EBA00_00745 PF13784 Fic/DOC family N-terminal EBA00_00750 PF00561 alpha/beta hydrolase fold EBA00_00760 PF03692 Putative zinc- or iron-chelating domain EBA00_00765 PF00501 AMP-binding enzyme EBA00_00770 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family EBA00_00785 PF01820 D-ala D-ala ligase N-terminus EBA00_00785 PF07478 D-ala D-ala ligase C-terminus EBA00_00800 PF03109 ABC1 family EBA00_00815 PF00849 RNA pseudouridylate synthase EBA00_00825 PF00472 RF-1 domain EBA00_00845 PF01432 Peptidase family M3 EBA00_00885 PF00326 Prolyl oligopeptidase family EBA00_00890 PF02785 Biotin carboxylase C-terminal domain EBA00_00890 PF00289 Biotin carboxylase, N-terminal domain EBA00_00890 PF00364 Biotin-requiring enzyme EBA00_00890 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EBA00_00900 PF01039 Carboxyl transferase domain EBA00_00905 PF02770 Acyl-CoA dehydrogenase, middle domain EBA00_00905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EBA00_00905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EBA00_00950 PF07683 Cobalamin synthesis protein cobW C-terminal domain EBA00_00950 PF02492 CobW/HypB/UreG, nucleotide-binding domain EBA00_00970 PF03969 AFG1-like ATPase EBA00_00975 PF01047 MarR family EBA00_00980 PF02566 OsmC-like protein EBA00_01000 PF03377 TAL effector repeat EBA00_01005 PF16671 Actin cross-linking domain EBA00_01005 PF04717 Type VI secretion system, phage-baseplate injector EBA00_01030 PF00248 Aldo/keto reductase family EBA00_01040 PF08125 Mannitol dehydrogenase C-terminal domain EBA00_01040 PF01232 Mannitol dehydrogenase Rossmann domain EBA00_01045 PF01915 Glycosyl hydrolase family 3 C-terminal domain EBA00_01045 PF14310 Fibronectin type III-like domain EBA00_01045 PF07691 PA14 domain EBA00_01045 PF00933 Glycosyl hydrolase family 3 N terminal domain EBA00_01050 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain EBA00_01050 PF04616 Glycosyl hydrolases family 43 EBA00_01055 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EBA00_01055 PF13378 Enolase C-terminal domain-like EBA00_01065 PF07477 Glycosyl hydrolase family 67 C-terminus EBA00_01065 PF03648 Glycosyl hydrolase family 67 N-terminus EBA00_01065 PF07488 Glycosyl hydrolase family 67 middle domain EBA00_01070 PF00356 Bacterial regulatory proteins, lacI family EBA00_01090 PF01171 PP-loop family EBA00_01095 PF04381 Putative exonuclease, RdgC EBA00_01120 PF12697 Alpha/beta hydrolase family EBA00_01125 PF00762 Ferrochelatase EBA00_01135 PF02416 mttA/Hcf106 family EBA00_01140 PF02416 mttA/Hcf106 family EBA00_01145 PF00902 Sec-independent protein translocase protein (TatC) EBA00_01155 PF00117 Glutamine amidotransferase class-I EBA00_01155 PF00958 GMP synthase C terminal domain EBA00_01160 PF05598 Transposase domain (DUF772) EBA00_01170 PF00437 Type II/IV secretion system protein EBA00_01170 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EBA00_01175 PF02091 Glycyl-tRNA synthetase alpha subunit EBA00_01180 PF02092 Glycyl-tRNA synthetase beta subunit EBA00_01180 PF05746 DALR anticodon binding domain EBA00_01185 PF13181 Tetratricopeptide repeat EBA00_01190 PF07715 TonB-dependent Receptor Plug Domain EBA00_01190 PF00593 TonB dependent receptor EBA00_01195 PF01103 Surface antigen EBA00_01195 PF17243 POTRA domain TamA domain 1 EBA00_01200 PF04357 TamB, inner membrane protein subunit of TAM complex EBA00_01205 PF01609 Transposase DDE domain EBA00_01205 PF05598 Transposase domain (DUF772) EBA00_01215 PF05598 Transposase domain (DUF772) EBA00_01215 PF01609 Transposase DDE domain EBA00_01245 PF13570 PQQ-like domain EBA00_01245 PF01011 PQQ enzyme repeat EBA00_01245 PF13360 PQQ-like domain EBA00_01260 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain EBA00_01260 PF06165 Glycosyltransferase family 36 EBA00_01270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_01270 PF00512 His Kinase A (phospho-acceptor) domain EBA00_01275 PF02659 Putative manganese efflux pump EBA00_01280 PF09339 IclR helix-turn-helix domain EBA00_01280 PF01614 Bacterial transcriptional regulator EBA00_01285 PF07690 Major Facilitator Superfamily EBA00_01290 PF05336 L-rhamnose mutarotase EBA00_01295 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EBA00_01295 PF13378 Enolase C-terminal domain-like EBA00_01305 PF01557 Fumarylacetoacetate (FAA) hydrolase family EBA00_01320 PF00248 Aldo/keto reductase family EBA00_01350 PF00196 Bacterial regulatory proteins, luxR family EBA00_01350 PF00072 Response regulator receiver domain EBA00_01355 PF00501 AMP-binding enzyme EBA00_01355 PF16177 Acetyl-coenzyme A synthetase N-terminus EBA00_01355 PF13193 AMP-binding enzyme C-terminal domain EBA00_01365 PF04341 Protein of unknown function, DUF485 EBA00_01370 PF00474 Sodium:solute symporter family EBA00_01385 PF03372 Endonuclease/Exonuclease/phosphatase family EBA00_01395 PF04226 Transglycosylase associated protein EBA00_01400 PF01648 4'-phosphopantetheinyl transferase superfamily EBA00_01405 PF09423 PhoD-like phosphatase EBA00_01405 PF16655 PhoD-like phosphatase, N-terminal domain EBA00_01410 PF16655 PhoD-like phosphatase, N-terminal domain EBA00_01410 PF09423 PhoD-like phosphatase EBA00_01415 PF02527 rRNA small subunit methyltransferase G EBA00_01435 PF00830 Ribosomal L28 family EBA00_01440 PF00471 Ribosomal protein L33 EBA00_01445 PF04909 Amidohydrolase EBA00_01460 PF03737 Aldolase/RraA EBA00_01465 PF05598 Transposase domain (DUF772) EBA00_01470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA00_01475 PF13396 Phospholipase_D-nuclease N-terminal EBA00_01475 PF13091 PLD-like domain EBA00_01495 PF00580 UvrD/REP helicase N-terminal domain EBA00_01495 PF13361 UvrD-like helicase C-terminal domain EBA00_01505 PF12464 Maltose acetyltransferase EBA00_01505 PF14602 Hexapeptide repeat of succinyl-transferase EBA00_01555 PF01612 3'-5' exonuclease EBA00_01555 PF01367 5'-3' exonuclease, C-terminal SAM fold EBA00_01555 PF00476 DNA polymerase family A EBA00_01555 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EBA00_01570 PF01218 Coproporphyrinogen III oxidase EBA00_01610 PF04820 Tryptophan halogenase EBA00_01615 PF00550 Phosphopantetheine attachment site EBA00_01625 PF01553 Acyltransferase EBA00_01630 PF07977 FabA-like domain EBA00_01675 PF00535 Glycosyl transferase family 2 EBA00_01685 PF00109 Beta-ketoacyl synthase, N-terminal domain EBA00_01685 PF02801 Beta-ketoacyl synthase, C-terminal domain EBA00_01690 PF05166 YcgL domain EBA00_01705 PF00723 Glycosyl hydrolases family 15 EBA00_01710 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EBA00_01710 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EBA00_01725 PF00999 Sodium/hydrogen exchanger family EBA00_01725 PF02254 TrkA-N domain EBA00_01735 PF00571 CBS domain EBA00_01735 PF01769 Divalent cation transporter EBA00_01735 PF03448 MgtE intracellular N domain EBA00_01745 PF13607 Succinyl-CoA ligase like flavodoxin domain EBA00_01745 PF13380 CoA binding domain EBA00_01745 PF00583 Acetyltransferase (GNAT) family EBA00_01760 PF03477 ATP cone domain EBA00_01760 PF02867 Ribonucleotide reductase, barrel domain EBA00_01760 PF00317 Ribonucleotide reductase, all-alpha domain EBA00_01770 PF00268 Ribonucleotide reductase, small chain EBA00_01775 PF02463 RecF/RecN/SMC N terminal domain EBA00_01775 PF06470 SMC proteins Flexible Hinge Domain EBA00_01790 PF13406 Transglycosylase SLT domain EBA00_01825 PF08546 Ketopantoate reductase PanE/ApbA C terminal EBA00_01825 PF02558 Ketopantoate reductase PanE/ApbA EBA00_01835 PF01061 ABC-2 type transporter EBA00_01840 PF00005 ABC transporter EBA00_01845 PF01383 CpcD/allophycocyanin linker domain EBA00_01845 PF00175 Oxidoreductase NAD-binding domain EBA00_01850 PF01545 Cation efflux family EBA00_01855 PF02583 Metal-sensitive transcriptional repressor EBA00_01870 PF01381 Helix-turn-helix EBA00_01880 PF00005 ABC transporter EBA00_01910 PF13936 Helix-turn-helix domain EBA00_01910 PF00665 Integrase core domain EBA00_01920 PF02798 Glutathione S-transferase, N-terminal domain EBA00_01920 PF00043 Glutathione S-transferase, C-terminal domain EBA00_01930 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region EBA00_01930 PF00326 Prolyl oligopeptidase family EBA00_01955 PF00490 Delta-aminolevulinic acid dehydratase EBA00_01970 PF03466 LysR substrate binding domain EBA00_01970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA00_01980 PF00175 Oxidoreductase NAD-binding domain EBA00_01980 PF00258 Flavodoxin EBA00_01980 PF00667 FAD binding domain EBA00_02000 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EBA00_02000 PF01488 Shikimate / quinate 5-dehydrogenase EBA00_02000 PF08501 Shikimate dehydrogenase substrate binding domain EBA00_02015 PF06733 DEAD_2 EBA00_02015 PF13307 Helicase C-terminal domain EBA00_02030 PF13533 Biotin-lipoyl like EBA00_02035 PF05598 Transposase domain (DUF772) EBA00_02035 PF01609 Transposase DDE domain EBA00_02040 PF06628 Catalase-related immune-responsive EBA00_02040 PF00199 Catalase EBA00_02075 PF03377 TAL effector repeat EBA00_02090 PF01207 Dihydrouridine synthase (Dus) EBA00_02100 PF00486 Transcriptional regulatory protein, C terminal EBA00_02100 PF00072 Response regulator receiver domain EBA00_02105 PF00672 HAMP domain EBA00_02105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_02105 PF00512 His Kinase A (phospho-acceptor) domain EBA00_02120 PF06167 Glucose-regulated metallo-peptidase M90 EBA00_02130 PF02237 Biotin protein ligase C terminal domain EBA00_02130 PF08279 HTH domain EBA00_02130 PF03099 Biotin/lipoate A/B protein ligase family EBA00_02135 PF03309 Type III pantothenate kinase EBA00_02150 PF02223 Thymidylate kinase EBA00_02170 PF00491 Arginase family EBA00_02185 PF05532 CsbD-like EBA00_02190 PF00579 tRNA synthetases class I (W and Y) EBA00_02195 PF00753 Metallo-beta-lactamase superfamily EBA00_02220 PF00892 EamA-like transporter family EBA00_02225 PF00892 EamA-like transporter family EBA00_02245 PF00199 Catalase EBA00_02250 PF08281 Sigma-70, region 4 EBA00_02250 PF04542 Sigma-70 region 2 EBA00_02260 PF02789 Cytosol aminopeptidase family, N-terminal domain EBA00_02260 PF00883 Cytosol aminopeptidase family, catalytic domain EBA00_02270 PF01594 AI-2E family transporter EBA00_02295 PF00595 PDZ domain EBA00_02310 PF08521 Two-component sensor kinase N-terminal EBA00_02310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_02310 PF00512 His Kinase A (phospho-acceptor) domain EBA00_02320 PF08338 Domain of unknown function (DUF1731) EBA00_02320 PF01370 NAD dependent epimerase/dehydratase family EBA00_02380 PF05598 Transposase domain (DUF772) EBA00_02380 PF01609 Transposase DDE domain EBA00_02385 PF00440 Bacterial regulatory proteins, tetR family EBA00_02390 PF00970 Oxidoreductase FAD-binding domain EBA00_02390 PF00175 Oxidoreductase NAD-binding domain EBA00_02390 PF00111 2Fe-2S iron-sulfur cluster binding domain EBA00_02395 PF00487 Fatty acid desaturase EBA00_02400 PF00563 EAL domain EBA00_02400 PF12792 CSS motif domain associated with EAL EBA00_02425 PF13335 Magnesium chelatase, subunit ChlI C-terminal EBA00_02425 PF01078 Magnesium chelatase, subunit ChlI EBA00_02430 PF04380 Membrane fusogenic activity EBA00_02435 PF00543 Nitrogen regulatory protein P-II EBA00_02470 PF17284 Spermidine synthase tetramerisation domain EBA00_02475 PF17810 Arginine decarboxylase helical bundle domain EBA00_02475 PF17944 Arginine decarboxylase C-terminal helical extension EBA00_02475 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EBA00_02505 PF03377 TAL effector repeat EBA00_02515 PF00106 short chain dehydrogenase EBA00_02530 PF03485 Arginyl tRNA synthetase N terminal domain EBA00_02530 PF00750 tRNA synthetases class I (R) EBA00_02530 PF05746 DALR anticodon binding domain EBA00_02535 PF04002 RadC-like JAB domain EBA00_02540 PF04127 DNA / pantothenate metabolism flavoprotein EBA00_02540 PF02441 Flavoprotein EBA00_02545 PF00692 dUTPase EBA00_02550 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EBA00_02550 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EBA00_02550 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EBA00_02550 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EBA00_02565 PF00535 Glycosyl transferase family 2 EBA00_02570 PF01370 NAD dependent epimerase/dehydratase family EBA00_02580 PF02195 ParB-like nuclease domain EBA00_02580 PF17762 HTH domain found in ParB protein EBA00_02585 PF13614 AAA domain EBA00_02595 PF00156 Phosphoribosyl transferase domain EBA00_02600 PF03372 Endonuclease/Exonuclease/phosphatase family EBA00_02605 PF07690 Major Facilitator Superfamily EBA00_02615 PF03702 Anhydro-N-acetylmuramic acid kinase EBA00_02620 PF01551 Peptidase family M23 EBA00_02620 PF04225 Opacity-associated protein A LysM-like domain EBA00_02625 PF00579 tRNA synthetases class I (W and Y) EBA00_02665 PF05598 Transposase domain (DUF772) EBA00_02675 PF00171 Aldehyde dehydrogenase family EBA00_02675 PF14850 DNA-binding domain of Proline dehydrogenase EBA00_02675 PF18327 Proline utilization A proline dehydrogenase N-terminal domain EBA00_02675 PF01619 Proline dehydrogenase EBA00_02685 PF02790 Cytochrome C oxidase subunit II, transmembrane domain EBA00_02685 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EBA00_02690 PF00115 Cytochrome C and Quinol oxidase polypeptide I EBA00_02700 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 EBA00_02705 PF00510 Cytochrome c oxidase subunit III EBA00_02730 PF01040 UbiA prenyltransferase family EBA00_02750 PF13593 SBF-like CPA transporter family (DUF4137) EBA00_02765 PF08275 DNA primase catalytic core, N-terminal domain EBA00_02765 PF01807 CHC2 zinc finger EBA00_02765 PF10410 DnaB-helicase binding domain of primase EBA00_02765 PF08278 DNA primase DnaG DnaB-binding EBA00_02770 PF03631 Virulence factor BrkB EBA00_02790 PF09424 Yqey-like protein EBA00_02795 PF01165 Ribosomal protein S21 EBA00_02800 PF00814 Glycoprotease family EBA00_02805 PF02152 Dihydroneopterin aldolase EBA00_02810 PF01915 Glycosyl hydrolase family 3 C-terminal domain EBA00_02810 PF00933 Glycosyl hydrolase family 3 N terminal domain EBA00_02810 PF14310 Fibronectin type III-like domain EBA00_02825 PF07995 Glucose / Sorbosone dehydrogenase EBA00_02830 PF05360 yiaA/B two helix domain EBA00_02850 PF13520 Amino acid permease EBA00_02875 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EBA00_02875 PF13378 Enolase C-terminal domain-like EBA00_02885 PF01510 N-acetylmuramoyl-L-alanine amidase EBA00_02940 PF07063 Domain of unknown function (DUF1338) EBA00_02960 PF00873 AcrB/AcrD/AcrF family EBA00_02965 PF00873 AcrB/AcrD/AcrF family EBA00_02970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EBA00_02975 PF07687 Peptidase dimerisation domain EBA00_02975 PF01546 Peptidase family M20/M25/M40 EBA00_02985 PF14489 QueF-like protein EBA00_02985 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term EBA00_03005 PF03971 Monomeric isocitrate dehydrogenase EBA00_03025 PF00005 ABC transporter EBA00_03040 PF07715 TonB-dependent Receptor Plug Domain EBA00_03040 PF00593 TonB dependent receptor EBA00_03080 PF08240 Alcohol dehydrogenase GroES-like domain EBA00_03080 PF13823 Alcohol dehydrogenase GroES-associated EBA00_03080 PF00107 Zinc-binding dehydrogenase EBA00_03115 PF02322 Cytochrome bd terminal oxidase subunit II EBA00_03120 PF01654 Cytochrome bd terminal oxidase subunit I EBA00_03135 PF00158 Sigma-54 interaction domain EBA00_03135 PF00072 Response regulator receiver domain EBA00_03135 PF02954 Bacterial regulatory protein, Fis family EBA00_03150 PF01609 Transposase DDE domain EBA00_03150 PF05598 Transposase domain (DUF772) EBA00_03160 PF08448 PAS fold EBA00_03160 PF03705 CheR methyltransferase, all-alpha domain EBA00_03160 PF01739 CheR methyltransferase, SAM binding domain EBA00_03160 PF01339 CheB methylesterase EBA00_03175 PF05067 Manganese containing catalase EBA00_03180 PF05974 Domain of unknown function (DUF892) EBA00_03195 PF04397 LytTr DNA-binding domain EBA00_03195 PF00072 Response regulator receiver domain EBA00_03205 PF13520 Amino acid permease EBA00_03225 PF05649 Peptidase family M13 EBA00_03225 PF01431 Peptidase family M13 EBA00_03245 PF03358 NADPH-dependent FMN reductase EBA00_03255 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase EBA00_03265 PF03167 Uracil DNA glycosylase superfamily EBA00_03275 PF02469 Fasciclin domain EBA00_03285 PF00999 Sodium/hydrogen exchanger family EBA00_03290 PF00005 ABC transporter EBA00_03295 PF01061 ABC-2 type transporter EBA00_03310 PF00082 Subtilase family EBA00_03310 PF04151 Bacterial pre-peptidase C-terminal domain EBA00_03320 PF00072 Response regulator receiver domain EBA00_03320 PF13188 PAS domain EBA00_03320 PF08448 PAS fold EBA00_03320 PF00512 His Kinase A (phospho-acceptor) domain EBA00_03320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_03325 PF00072 Response regulator receiver domain EBA00_03325 PF00486 Transcriptional regulatory protein, C terminal EBA00_03345 PF00691 OmpA family EBA00_03345 PF13677 Membrane MotB of proton-channel complex MotA/MotB EBA00_03350 PF01618 MotA/TolQ/ExbB proton channel family EBA00_03360 PF01641 SelR domain EBA00_03370 PF01037 Lrp/AsnC ligand binding domain EBA00_03375 PF01266 FAD dependent oxidoreductase EBA00_03380 PF01168 Alanine racemase, N-terminal domain EBA00_03380 PF00842 Alanine racemase, C-terminal domain EBA00_03400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_03400 PF00512 His Kinase A (phospho-acceptor) domain EBA00_03400 PF00989 PAS fold EBA00_03415 PF07995 Glucose / Sorbosone dehydrogenase EBA00_03430 PF08468 Methyltransferase small domain N-terminal EBA00_03430 PF05175 Methyltransferase small domain EBA00_03435 PF00849 RNA pseudouridylate synthase EBA00_03435 PF01479 S4 domain EBA00_03440 PF13419 Haloacid dehalogenase-like hydrolase EBA00_03470 PF04461 Protein of unknown function (DUF520) EBA00_03475 PF00892 EamA-like transporter family EBA00_03480 PF00005 ABC transporter EBA00_03480 PF09383 NIL domain EBA00_03485 PF00528 Binding-protein-dependent transport system inner membrane component EBA00_03490 PF03180 NLPA lipoprotein EBA00_03520 PF00364 Biotin-requiring enzyme EBA00_03520 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EBA00_03520 PF02817 e3 binding domain EBA00_03530 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA00_03530 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EBA00_03550 PF00119 ATP synthase A chain EBA00_03555 PF00137 ATP synthase subunit C EBA00_03560 PF00430 ATP synthase B/B' CF(0) EBA00_03565 PF00213 ATP synthase delta (OSCP) subunit EBA00_03570 PF02874 ATP synthase alpha/beta family, beta-barrel domain EBA00_03570 PF00306 ATP synthase alpha/beta chain, C terminal domain EBA00_03570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EBA00_03575 PF00231 ATP synthase EBA00_03580 PF02874 ATP synthase alpha/beta family, beta-barrel domain EBA00_03580 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EBA00_03585 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain EBA00_03590 PF01817 Chorismate mutase type II EBA00_03605 PF00132 Bacterial transferase hexapeptide (six repeats) EBA00_03605 PF12804 MobA-like NTP transferase domain EBA00_03605 PF14602 Hexapeptide repeat of succinyl-transferase EBA00_03650 PF01380 SIS domain EBA00_03675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EBA00_03680 PF05275 Copper resistance protein B precursor (CopB) EBA00_03685 PF07731 Multicopper oxidase EBA00_03685 PF07732 Multicopper oxidase EBA00_03685 PF00394 Multicopper oxidase EBA00_03700 PF01432 Peptidase family M3 EBA00_03710 PF00109 Beta-ketoacyl synthase, N-terminal domain EBA00_03710 PF02801 Beta-ketoacyl synthase, C-terminal domain EBA00_03715 PF07977 FabA-like domain EBA00_03725 PF00817 impB/mucB/samB family EBA00_03725 PF11799 impB/mucB/samB family C-terminal domain EBA00_03730 PF13419 Haloacid dehalogenase-like hydrolase EBA00_03740 PF13185 GAF domain EBA00_03755 PF01242 6-pyruvoyl tetrahydropterin synthase EBA00_03765 PF00271 Helicase conserved C-terminal domain EBA00_03765 PF00270 DEAD/DEAH box helicase EBA00_03780 PF02798 Glutathione S-transferase, N-terminal domain EBA00_03780 PF14497 Glutathione S-transferase, C-terminal domain EBA00_03785 PF00437 Type II/IV secretion system protein EBA00_03805 PF00571 CBS domain EBA00_03805 PF00291 Pyridoxal-phosphate dependent enzyme EBA00_03810 PF01053 Cys/Met metabolism PLP-dependent enzyme EBA00_03820 PF01370 NAD dependent epimerase/dehydratase family EBA00_03855 PF05598 Transposase domain (DUF772) EBA00_03865 PF00005 ABC transporter EBA00_03875 PF00766 Electron transfer flavoprotein FAD-binding domain EBA00_03875 PF01012 Electron transfer flavoprotein domain EBA00_03880 PF01012 Electron transfer flavoprotein domain EBA00_03890 PF16363 GDP-mannose 4,6 dehydratase EBA00_03895 PF00483 Nucleotidyl transferase EBA00_03900 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase EBA00_03905 PF04321 RmlD substrate binding domain EBA00_03910 PF01050 Mannose-6-phosphate isomerase EBA00_03910 PF00483 Nucleotidyl transferase EBA00_03915 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EBA00_03915 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EBA00_03915 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EBA00_03915 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EBA00_03920 PF01144 Coenzyme A transferase EBA00_03925 PF01144 Coenzyme A transferase EBA00_03930 PF14307 Glycosyltransferase WbsX EBA00_03930 PF05045 Rhamnan synthesis protein F EBA00_03960 PF02470 MlaD protein EBA00_03960 PF03886 ABC-type transport auxiliary lipoprotein component EBA00_03965 PF00005 ABC transporter EBA00_03970 PF02405 Permease MlaE EBA00_03980 PF00816 H-NS histone family EBA00_03985 PF03129 Anticodon binding domain EBA00_03985 PF04073 Aminoacyl-tRNA editing domain EBA00_03985 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EBA00_03995 PF01066 CDP-alcohol phosphatidyltransferase EBA00_04015 PF13936 Helix-turn-helix domain EBA00_04015 PF00665 Integrase core domain EBA00_04025 PF13936 Helix-turn-helix domain EBA00_04025 PF00665 Integrase core domain EBA00_04035 PF05598 Transposase domain (DUF772) EBA00_04045 PF01464 Transglycosylase SLT domain EBA00_04045 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain EBA00_04055 PF00133 tRNA synthetases class I (I, L, M and V) EBA00_04055 PF08264 Anticodon-binding domain of tRNA EBA00_04055 PF10458 Valyl tRNA synthetase tRNA binding arm EBA00_04080 PF02789 Cytosol aminopeptidase family, N-terminal domain EBA00_04080 PF00883 Cytosol aminopeptidase family, catalytic domain EBA00_04090 PF03739 Lipopolysaccharide export system permease LptF/LptG EBA00_04105 PF00589 Phage integrase family EBA00_04105 PF02899 Phage integrase, N-terminal SAM-like domain EBA00_04110 PF10411 Disulfide bond isomerase protein N-terminus EBA00_04110 PF13098 Thioredoxin-like domain EBA00_04120 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain EBA00_04120 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal EBA00_04120 PF02769 AIR synthase related protein, C-terminal domain EBA00_04130 PF05662 Coiled stalk of trimeric autotransporter adhesin EBA00_04130 PF13018 Extended Signal Peptide of Type V secretion system EBA00_04130 PF03895 YadA-like membrane anchor domain EBA00_04130 PF05658 Head domain of trimeric autotransporter adhesin EBA00_04135 PF04151 Bacterial pre-peptidase C-terminal domain EBA00_04135 PF00082 Subtilase family EBA00_04140 PF00437 Type II/IV secretion system protein EBA00_04140 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EBA00_04150 PF00482 Type II secretion system (T2SS), protein F EBA00_04155 PF08334 Type II secretion system (T2SS), protein G EBA00_04160 PF12019 Type II transport protein GspH EBA00_04165 PF07963 Prokaryotic N-terminal methylation motif EBA00_04175 PF03934 Type II secretion system (T2SS), protein K EBA00_04180 PF05137 Fimbrial assembly protein (PilN) EBA00_04185 PF10741 Type II secretion system (T2SS), protein M subtype b EBA00_04195 PF03958 Bacterial type II/III secretion system short domain EBA00_04195 PF00263 Bacterial type II and III secretion system protein EBA00_04210 PF00392 Bacterial regulatory proteins, gntR family EBA00_04210 PF07702 UTRA domain EBA00_04225 PF00593 TonB dependent receptor EBA00_04225 PF07715 TonB-dependent Receptor Plug Domain EBA00_04270 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain EBA00_04270 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family EBA00_04295 PF03960 ArsC family EBA00_04300 PF01609 Transposase DDE domain EBA00_04300 PF05598 Transposase domain (DUF772) EBA00_04305 PF01327 Polypeptide deformylase EBA00_04355 PF01979 Amidohydrolase family EBA00_04375 PF00462 Glutaredoxin EBA00_04380 PF01522 Polysaccharide deacetylase EBA00_04400 PF00155 Aminotransferase class I and II EBA00_04405 PF03193 RsgA GTPase EBA00_04420 PF00128 Alpha amylase, catalytic domain EBA00_04435 PF05598 Transposase domain (DUF772) EBA00_04440 PF00356 Bacterial regulatory proteins, lacI family EBA00_04445 PF00106 short chain dehydrogenase EBA00_04450 PF03600 Citrate transporter EBA00_04465 PF00486 Transcriptional regulatory protein, C terminal EBA00_04465 PF00072 Response regulator receiver domain EBA00_04470 PF08521 Two-component sensor kinase N-terminal EBA00_04470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_04470 PF00512 His Kinase A (phospho-acceptor) domain EBA00_04480 PF00196 Bacterial regulatory proteins, luxR family EBA00_04480 PF00072 Response regulator receiver domain EBA00_04500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA00_04500 PF03466 LysR substrate binding domain EBA00_04510 PF07690 Major Facilitator Superfamily EBA00_04515 PF00512 His Kinase A (phospho-acceptor) domain EBA00_04515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_04530 PF00375 Sodium:dicarboxylate symporter family EBA00_04535 PF00390 Malic enzyme, N-terminal domain EBA00_04535 PF03949 Malic enzyme, NAD binding domain EBA00_04535 PF01515 Phosphate acetyl/butaryl transferase EBA00_04550 PF05598 Transposase domain (DUF772) EBA00_04550 PF01609 Transposase DDE domain EBA00_04575 PF05598 Transposase domain (DUF772) EBA00_04610 PF00005 ABC transporter EBA00_04610 PF00664 ABC transporter transmembrane region EBA00_04610 PF03412 Peptidase C39 family EBA00_04615 PF13936 Helix-turn-helix domain EBA00_04615 PF00665 Integrase core domain EBA00_04625 PF05598 Transposase domain (DUF772) EBA00_04625 PF01609 Transposase DDE domain EBA00_04645 PF03279 Bacterial lipid A biosynthesis acyltransferase EBA00_04650 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) EBA00_04655 PF02321 Outer membrane efflux protein EBA00_04675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA00_04680 PF00330 Aconitase family (aconitate hydratase) EBA00_04685 PF00694 Aconitase C-terminal domain EBA00_04690 PF08241 Methyltransferase domain EBA00_04695 PF00180 Isocitrate/isopropylmalate dehydrogenase EBA00_04700 PF00682 HMGL-like EBA00_04700 PF08502 LeuA allosteric (dimerisation) domain EBA00_04705 PF00291 Pyridoxal-phosphate dependent enzyme EBA00_04715 PF00205 Thiamine pyrophosphate enzyme, central domain EBA00_04715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EBA00_04715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EBA00_04720 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain EBA00_04720 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain EBA00_04730 PF13667 ThiC-associated domain EBA00_04730 PF01964 Radical SAM ThiC family EBA00_04735 PF18500 CadC C-terminal domain 1 EBA00_04735 PF00486 Transcriptional regulatory protein, C terminal EBA00_04740 PF12833 Helix-turn-helix domain EBA00_04745 PF00593 TonB dependent receptor EBA00_04745 PF07715 TonB-dependent Receptor Plug Domain EBA00_04760 PF00719 Inorganic pyrophosphatase EBA00_04770 PF03030 Inorganic H+ pyrophosphatase EBA00_04785 PF01609 Transposase DDE domain EBA00_04785 PF05598 Transposase domain (DUF772) EBA00_04790 PF00365 Phosphofructokinase EBA00_04800 PF02875 Mur ligase family, glutamate ligase domain EBA00_04800 PF01225 Mur ligase family, catalytic domain EBA00_04800 PF08245 Mur ligase middle domain EBA00_04810 PF01062 Bestrophin, RFP-TM, chloride channel EBA00_04825 PF01569 PAP2 superfamily EBA00_04860 PF00202 Aminotransferase class-III EBA00_04900 PF00127 Copper binding proteins, plastocyanin/azurin family EBA00_04905 PF17874 MalT-like TPR region EBA00_04905 PF00196 Bacterial regulatory proteins, luxR family EBA00_04915 PF00202 Aminotransferase class-III EBA00_04930 PF02581 Thiamine monophosphate synthase EBA00_04935 PF00301 Rubredoxin EBA00_04940 PF13369 Transglutaminase-like superfamily EBA00_04950 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EBA00_04970 PF05164 Cell division protein ZapA EBA00_04980 PF03695 Uncharacterised protein family (UPF0149) EBA00_04985 PF05195 Aminopeptidase P, N-terminal domain EBA00_04985 PF00557 Metallopeptidase family M24 EBA00_05000 PF00557 Metallopeptidase family M24 EBA00_05015 PF04055 Radical SAM superfamily EBA00_05015 PF06969 HemN C-terminal domain EBA00_05020 PF01725 Ham1 family EBA00_05030 PF03725 3' exoribonuclease family, domain 2 EBA00_05030 PF01138 3' exoribonuclease family, domain 1 EBA00_05035 PF03755 YicC-like family, N-terminal region EBA00_05035 PF08340 Domain of unknown function (DUF1732) EBA00_05040 PF00625 Guanylate kinase EBA00_05050 PF01192 RNA polymerase Rpb6 EBA00_05055 PF13291 ACT domain EBA00_05055 PF04607 Region found in RelA / SpoT proteins EBA00_05055 PF02824 TGS domain EBA00_05060 PF01042 Endoribonuclease L-PSP EBA00_05065 PF17191 RecG wedge domain EBA00_05065 PF00270 DEAD/DEAH box helicase EBA00_05065 PF00271 Helicase conserved C-terminal domain EBA00_05070 PF01156 Inosine-uridine preferring nucleoside hydrolase EBA00_05075 PF01197 Ribosomal protein L31 EBA00_05080 PF00285 Citrate synthase, C-terminal domain EBA00_05095 PF05598 Transposase domain (DUF772) EBA00_05100 PF00905 Penicillin binding protein transpeptidase domain EBA00_05100 PF17092 Penicillin-binding protein OB-like domain EBA00_05100 PF00912 Transglycosylase EBA00_05125 PF07660 Secretin and TonB N terminus short domain EBA00_05125 PF03958 Bacterial type II/III secretion system short domain EBA00_05125 PF00263 Bacterial type II and III secretion system protein EBA00_05125 PF11741 AMIN domain EBA00_05135 PF07726 ATPase family associated with various cellular activities (AAA) EBA00_05135 PF17863 AAA lid domain EBA00_05155 PF00092 von Willebrand factor type A domain EBA00_05155 PF07584 Aerotolerance regulator N-terminal EBA00_05175 PF00375 Sodium:dicarboxylate symporter family EBA00_05180 PF02779 Transketolase, pyrimidine binding domain EBA00_05180 PF00456 Transketolase, thiamine diphosphate binding domain EBA00_05180 PF02780 Transketolase, C-terminal domain EBA00_05195 PF04225 Opacity-associated protein A LysM-like domain EBA00_05195 PF01551 Peptidase family M23 EBA00_05200 PF03734 L,D-transpeptidase catalytic domain EBA00_05200 PF01476 LysM domain EBA00_05225 PF00501 AMP-binding enzyme EBA00_05245 PF00486 Transcriptional regulatory protein, C terminal EBA00_05245 PF00072 Response regulator receiver domain EBA00_05250 PF00512 His Kinase A (phospho-acceptor) domain EBA00_05250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_05250 PF08521 Two-component sensor kinase N-terminal EBA00_05270 PF00005 ABC transporter EBA00_05270 PF03459 TOBE domain EBA00_05275 PF00528 Binding-protein-dependent transport system inner membrane component EBA00_05285 PF00753 Metallo-beta-lactamase superfamily EBA00_05285 PF04273 Putative phosphatase (DUF442) EBA00_05300 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EBA00_05300 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EBA00_05315 PF00162 Phosphoglycerate kinase EBA00_05325 PF00224 Pyruvate kinase, barrel domain EBA00_05325 PF02887 Pyruvate kinase, alpha/beta domain EBA00_05335 PF00274 Fructose-bisphosphate aldolase class-I EBA00_05340 PF01661 Macro domain EBA00_05350 PF00291 Pyridoxal-phosphate dependent enzyme EBA00_05355 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EBA00_05355 PF10414 Sirohaem synthase dimerisation region EBA00_05355 PF14824 Sirohaem biosynthesis protein central EBA00_05360 PF03466 LysR substrate binding domain EBA00_05360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA00_05385 PF00072 Response regulator receiver domain EBA00_05385 PF00512 His Kinase A (phospho-acceptor) domain EBA00_05385 PF01627 Hpt domain EBA00_05385 PF00672 HAMP domain EBA00_05385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_05405 PF01507 Phosphoadenosine phosphosulfate reductase family EBA00_05410 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EBA00_05410 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EBA00_05415 PF00667 FAD binding domain EBA00_05415 PF00258 Flavodoxin EBA00_05415 PF00175 Oxidoreductase NAD-binding domain EBA00_05420 PF01507 Phosphoadenosine phosphosulfate reductase family EBA00_05425 PF00009 Elongation factor Tu GTP binding domain EBA00_05430 PF00529 HlyD membrane-fusion protein of T1SS EBA00_05430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EBA00_05435 PF00873 AcrB/AcrD/AcrF family EBA00_05440 PF11838 ERAP1-like C-terminal domain EBA00_05440 PF01433 Peptidase family M1 domain EBA00_05450 PF00588 SpoU rRNA Methylase family EBA00_05450 PF08032 RNA 2'-O ribose methyltransferase substrate binding EBA00_05485 PF01741 Large-conductance mechanosensitive channel, MscL EBA00_05490 PF01557 Fumarylacetoacetate (FAA) hydrolase family EBA00_05515 PF02080 TrkA-C domain EBA00_05515 PF03600 Citrate transporter EBA00_05520 PF02390 Putative methyltransferase EBA00_05530 PF05690 Thiazole biosynthesis protein ThiG EBA00_05555 PF05598 Transposase domain (DUF772) EBA00_05555 PF01609 Transposase DDE domain EBA00_05565 PF13276 HTH-like domain EBA00_05565 PF13683 Integrase core domain EBA00_05575 PF05598 Transposase domain (DUF772) EBA00_05580 PF05598 Transposase domain (DUF772) EBA00_05580 PF01609 Transposase DDE domain EBA00_05595 PF01609 Transposase DDE domain EBA00_05595 PF05598 Transposase domain (DUF772) EBA00_05600 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EBA00_05600 PF00128 Alpha amylase, catalytic domain EBA00_05605 PF18030 RimK PreATP-grasp domain EBA00_05605 PF08443 RimK-like ATP-grasp domain EBA00_05615 PF00486 Transcriptional regulatory protein, C terminal EBA00_05615 PF00072 Response regulator receiver domain EBA00_05620 PF00672 HAMP domain EBA00_05620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_05620 PF00512 His Kinase A (phospho-acceptor) domain EBA00_05625 PF01121 Dephospho-CoA kinase EBA00_05630 PF06750 Bacterial Peptidase A24 N-terminal domain EBA00_05630 PF01478 Type IV leader peptidase family EBA00_05635 PF00482 Type II secretion system (T2SS), protein F EBA00_05640 PF07963 Prokaryotic N-terminal methylation motif EBA00_05640 PF00114 Pilin (bacterial filament) EBA00_05645 PF00884 Sulfatase EBA00_05645 PF08019 Phosphoethanolamine transferase EptA/EptB EBA00_05660 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EBA00_05660 PF00437 Type II/IV secretion system protein EBA00_05665 PF02661 Fic/DOC family EBA00_05675 PF00072 Response regulator receiver domain EBA00_05675 PF02954 Bacterial regulatory protein, Fis family EBA00_05675 PF00158 Sigma-54 interaction domain EBA00_05680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_05680 PF00512 His Kinase A (phospho-acceptor) domain EBA00_05685 PF00549 CoA-ligase EBA00_05685 PF08442 ATP-grasp domain EBA00_05690 PF00549 CoA-ligase EBA00_05690 PF02629 CoA binding domain EBA00_05705 PF02540 NAD synthase EBA00_05705 PF00795 Carbon-nitrogen hydrolase EBA00_05710 PF13525 Outer membrane lipoprotein EBA00_05715 PF00849 RNA pseudouridylate synthase EBA00_05740 PF01011 PQQ enzyme repeat EBA00_05745 PF00982 Glycosyltransferase family 20 EBA00_05750 PF00723 Glycosyl hydrolases family 15 EBA00_05755 PF02358 Trehalose-phosphatase EBA00_05765 PF00593 TonB dependent receptor EBA00_05765 PF07715 TonB-dependent Receptor Plug Domain EBA00_05795 PF04377 Arginine-tRNA-protein transferase, C terminus EBA00_05795 PF04376 Arginine-tRNA-protein transferase, N terminus EBA00_05810 PF08281 Sigma-70, region 4 EBA00_05810 PF04542 Sigma-70 region 2 EBA00_05825 PF00378 Enoyl-CoA hydratase/isomerase EBA00_05840 PF17760 UvrA interaction domain EBA00_05840 PF00005 ABC transporter EBA00_05840 PF17755 UvrA DNA-binding domain EBA00_05845 PF00829 Ribosomal prokaryotic L21 protein EBA00_05850 PF01016 Ribosomal L27 protein EBA00_05855 PF01926 50S ribosome-binding GTPase EBA00_05855 PF01018 GTP1/OBG EBA00_05860 PF01649 Ribosomal protein S20 EBA00_05865 PF03023 Lipid II flippase MurJ EBA00_05875 PF06827 Zinc finger found in FPG and IleRS EBA00_05875 PF00133 tRNA synthetases class I (I, L, M and V) EBA00_05875 PF08264 Anticodon-binding domain of tRNA EBA00_05880 PF01252 Signal peptidase (SPase) II EBA00_05885 PF02401 LytB protein EBA00_05895 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EBA00_05895 PF06481 COX Aromatic Rich Motif EBA00_05900 PF00115 Cytochrome C and Quinol oxidase polypeptide I EBA00_05905 PF00510 Cytochrome c oxidase subunit III EBA00_05910 PF03626 Prokaryotic Cytochrome C oxidase subunit IV EBA00_05920 PF04717 Type VI secretion system, phage-baseplate injector EBA00_05930 PF14220 Domain of unknown function (DUF4329) EBA00_05930 PF03527 RHS protein EBA00_05930 PF05593 RHS Repeat EBA00_05940 PF05593 RHS Repeat EBA00_05940 PF03527 RHS protein EBA00_05940 PF14220 Domain of unknown function (DUF4329) EBA00_05975 PF18073 Rubredoxin metal binding domain EBA00_05990 PF12833 Helix-turn-helix domain EBA00_06005 PF01740 STAS domain EBA00_06005 PF08678 Rsbr N terminal EBA00_06010 PF01740 STAS domain EBA00_06015 PF13581 Histidine kinase-like ATPase domain EBA00_06025 PF00512 His Kinase A (phospho-acceptor) domain EBA00_06025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_06025 PF00672 HAMP domain EBA00_06025 PF17149 Periplasmic sensor domain found in signal transduction proteins EBA00_06025 PF01627 Hpt domain EBA00_06025 PF00072 Response regulator receiver domain EBA00_06030 PF08448 PAS fold EBA00_06030 PF00512 His Kinase A (phospho-acceptor) domain EBA00_06030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_06030 PF00072 Response regulator receiver domain EBA00_06030 PF13188 PAS domain EBA00_06045 PF06964 Alpha-L-arabinofuranosidase C-terminal domain EBA00_06050 PF01263 Aldose 1-epimerase EBA00_06055 PF01578 Cytochrome C assembly protein EBA00_06065 PF02978 Signal peptide binding domain EBA00_06065 PF00448 SRP54-type protein, GTPase domain EBA00_06065 PF02881 SRP54-type protein, helical bundle domain EBA00_06090 PF00886 Ribosomal protein S16 EBA00_06095 PF05239 PRC-barrel domain EBA00_06095 PF01782 RimM N-terminal domain EBA00_06100 PF01746 tRNA (Guanine-1)-methyltransferase EBA00_06105 PF01245 Ribosomal protein L19 EBA00_06115 PF01554 MatE EBA00_06120 PF01479 S4 domain EBA00_06125 PF00141 Peroxidase EBA00_06135 PF01624 MutS domain I EBA00_06135 PF05188 MutS domain II EBA00_06135 PF05192 MutS domain III EBA00_06135 PF05190 MutS family domain IV EBA00_06135 PF00488 MutS domain V EBA00_06145 PF01541 GIY-YIG catalytic domain EBA00_06150 PF02861 Clp amino terminal domain, pathogenicity island component EBA00_06150 PF17871 AAA lid domain EBA00_06150 PF07724 AAA domain (Cdc48 subfamily) EBA00_06150 PF00004 ATPase family associated with various cellular activities (AAA) EBA00_06150 PF10431 C-terminal, D2-small domain, of ClpB protein EBA00_06180 PF00593 TonB dependent receptor EBA00_06180 PF07715 TonB-dependent Receptor Plug Domain EBA00_06200 PF12557 Cob(I)alamin adenosyltransferase N terminal EBA00_06200 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP EBA00_06205 PF00155 Aminotransferase class I and II EBA00_06210 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase EBA00_06215 PF02277 Phosphoribosyltransferase EBA00_06225 PF02654 Cobalamin-5-phosphate synthase EBA00_06235 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EBA00_06235 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EBA00_06245 PF07690 Major Facilitator Superfamily EBA00_06250 PF06276 Ferric iron reductase FhuF-like transporter EBA00_06250 PF04183 IucA / IucC family EBA00_06260 PF07715 TonB-dependent Receptor Plug Domain EBA00_06260 PF07660 Secretin and TonB N terminus short domain EBA00_06260 PF00593 TonB dependent receptor EBA00_06270 PF00753 Metallo-beta-lactamase superfamily EBA00_06270 PF04273 Putative phosphatase (DUF442) EBA00_06305 PF00999 Sodium/hydrogen exchanger family EBA00_06305 PF02254 TrkA-N domain EBA00_06315 PF00593 TonB dependent receptor EBA00_06315 PF07715 TonB-dependent Receptor Plug Domain EBA00_06320 PF00593 TonB dependent receptor EBA00_06320 PF07715 TonB-dependent Receptor Plug Domain EBA00_06330 PF00593 TonB dependent receptor EBA00_06330 PF07715 TonB-dependent Receptor Plug Domain EBA00_06335 PF12848 ABC transporter EBA00_06335 PF00005 ABC transporter EBA00_06345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA00_06345 PF03466 LysR substrate binding domain EBA00_06365 PF05506 Domain of unknown function (DUF756) EBA00_06365 PF04185 Phosphoesterase family EBA00_06370 PF07690 Major Facilitator Superfamily EBA00_06385 PF01336 OB-fold nucleic acid binding domain EBA00_06385 PF00152 tRNA synthetases class II (D, K and N) EBA00_06385 PF02938 GAD domain EBA00_06400 PF01709 Transcriptional regulator EBA00_06405 PF02075 Crossover junction endodeoxyribonuclease RuvC EBA00_06410 PF01330 RuvA N terminal domain EBA00_06410 PF07499 RuvA, C-terminal domain EBA00_06415 PF02705 K+ potassium transporter EBA00_06420 PF05496 Holliday junction DNA helicase RuvB P-loop domain EBA00_06420 PF17864 RuvB AAA lid domain EBA00_06420 PF05491 RuvB C-terminal winged helix domain EBA00_06425 PF03061 Thioesterase superfamily EBA00_06430 PF01618 MotA/TolQ/ExbB proton channel family EBA00_06435 PF02472 Biopolymer transport protein ExbD/TolR EBA00_06445 PF04052 TolB amino-terminal domain EBA00_06445 PF07676 WD40-like Beta Propeller Repeat EBA00_06450 PF00691 OmpA family EBA00_06460 PF04055 Radical SAM superfamily EBA00_06470 PF06508 Queuosine biosynthesis protein QueC EBA00_06510 PF01479 S4 domain EBA00_06510 PF00849 RNA pseudouridylate synthase EBA00_06525 PF01609 Transposase DDE domain EBA00_06525 PF05598 Transposase domain (DUF772) EBA00_06540 PF00570 HRDC domain EBA00_06540 PF00270 DEAD/DEAH box helicase EBA00_06540 PF16124 RecQ zinc-binding EBA00_06540 PF09382 RQC domain EBA00_06540 PF00271 Helicase conserved C-terminal domain EBA00_06555 PF00210 Ferritin-like domain EBA00_06560 PF11898 Domain of unknown function (DUF3418) EBA00_06560 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold EBA00_06560 PF00271 Helicase conserved C-terminal domain EBA00_06560 PF04408 Helicase associated domain (HA2) EBA00_06560 PF00270 DEAD/DEAH box helicase EBA00_06585 PF04055 Radical SAM superfamily EBA00_06585 PF13186 Iron-sulfur cluster-binding domain EBA00_06590 PF05402 Coenzyme PQQ synthesis protein D (PqqD) EBA00_06595 PF03070 TENA/THI-4/PQQC family EBA00_06600 PF12706 Beta-lactamase superfamily domain EBA00_06605 PF08042 PqqA family EBA00_06610 PF02824 TGS domain EBA00_06610 PF13291 ACT domain EBA00_06610 PF04607 Region found in RelA / SpoT proteins EBA00_06620 PF00535 Glycosyl transferase family 2 EBA00_06625 PF00912 Transglycosylase EBA00_06625 PF14814 Bifunctional transglycosylase second domain EBA00_06625 PF00905 Penicillin binding protein transpeptidase domain EBA00_06635 PF13307 Helicase C-terminal domain EBA00_06635 PF04851 Type III restriction enzyme, res subunit EBA00_06640 PF00814 Glycoprotease family EBA00_06645 PF03747 ADP-ribosylglycohydrolase EBA00_06655 PF02951 Prokaryotic glutathione synthetase, N-terminal domain EBA00_06655 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain EBA00_06660 PF00072 Response regulator receiver domain EBA00_06665 PF00072 Response regulator receiver domain EBA00_06670 PF01584 CheW-like domain EBA00_06675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA00_06675 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term EBA00_06680 PF01584 CheW-like domain EBA00_06680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_06680 PF01627 Hpt domain EBA00_06680 PF00072 Response regulator receiver domain EBA00_06695 PF13302 Acetyltransferase (GNAT) domain EBA00_06705 PF12034 Domain of unknown function (DUF3520) EBA00_06705 PF00092 von Willebrand factor type A domain EBA00_06705 PF12450 von Willebrand factor EBA00_06715 PF01112 Asparaginase EBA00_06720 PF03932 CutC family EBA00_06755 PF01301 Glycosyl hydrolases family 35 EBA00_06765 PF17678 Glycosyl hydrolase family 92 N-terminal domain EBA00_06765 PF07971 Glycosyl hydrolase family 92 EBA00_06790 PF03412 Peptidase C39 family EBA00_06790 PF00664 ABC transporter transmembrane region EBA00_06790 PF00005 ABC transporter EBA00_06810 PF05598 Transposase domain (DUF772) EBA00_06810 PF01609 Transposase DDE domain EBA00_06820 PF05598 Transposase domain (DUF772) EBA00_06825 PF05598 Transposase domain (DUF772) EBA00_06835 PF03412 Peptidase C39 family EBA00_06835 PF00005 ABC transporter EBA00_06835 PF00664 ABC transporter transmembrane region EBA00_06840 PF14310 Fibronectin type III-like domain EBA00_06840 PF01915 Glycosyl hydrolase family 3 C-terminal domain EBA00_06840 PF07691 PA14 domain EBA00_06840 PF00933 Glycosyl hydrolase family 3 N terminal domain EBA00_06860 PF01476 LysM domain EBA00_06860 PF00704 Glycosyl hydrolases family 18 EBA00_06875 PF02685 Glucokinase EBA00_06880 PF04452 RNA methyltransferase EBA00_06885 PF00202 Aminotransferase class-III EBA00_06890 PF00293 NUDIX domain EBA00_06895 PF00459 Inositol monophosphatase family EBA00_06900 PF03819 MazG nucleotide pyrophosphohydrolase domain EBA00_06905 PF02694 Uncharacterised BCR, YnfA/UPF0060 family EBA00_06915 PF01145 SPFH domain / Band 7 family EBA00_06915 PF16200 C-terminal region of band_7 EBA00_06925 PF01571 Aminomethyltransferase folate-binding domain EBA00_06925 PF08669 Glycine cleavage T-protein C-terminal barrel domain EBA00_06930 PF01597 Glycine cleavage H-protein EBA00_06955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EBA00_06955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EBA00_06955 PF09317 Domain of unknown function (DUF1974) EBA00_06960 PF00561 alpha/beta hydrolase fold EBA00_06965 PF00440 Bacterial regulatory proteins, tetR family EBA00_06970 PF07715 TonB-dependent Receptor Plug Domain EBA00_06970 PF00593 TonB dependent receptor EBA00_06980 PF01430 Hsp33 protein EBA00_06985 PF00912 Transglycosylase EBA00_06990 PF00535 Glycosyl transferase family 2 EBA00_06995 PF00478 IMP dehydrogenase / GMP reductase domain EBA00_06995 PF00571 CBS domain EBA00_07005 PF05598 Transposase domain (DUF772) EBA00_07015 PF03006 Haemolysin-III related EBA00_07020 PF00009 Elongation factor Tu GTP binding domain EBA00_07020 PF16658 Class II release factor RF3, C-terminal domain EBA00_07025 PF08525 Opacity-associated protein A N-terminal motif EBA00_07025 PF01551 Peptidase family M23 EBA00_07025 PF01476 LysM domain EBA00_07030 PF00561 alpha/beta hydrolase fold EBA00_07035 PF01053 Cys/Met metabolism PLP-dependent enzyme EBA00_07045 PF03315 Serine dehydratase beta chain EBA00_07045 PF03313 Serine dehydratase alpha chain EBA00_07070 PF04264 YceI-like domain EBA00_07075 PF01627 Hpt domain EBA00_07075 PF00072 Response regulator receiver domain EBA00_07075 PF17149 Periplasmic sensor domain found in signal transduction proteins EBA00_07075 PF00672 HAMP domain EBA00_07075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_07075 PF00512 His Kinase A (phospho-acceptor) domain EBA00_07080 PF00072 Response regulator receiver domain EBA00_07080 PF01627 Hpt domain EBA00_07080 PF00512 His Kinase A (phospho-acceptor) domain EBA00_07080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_07080 PF17149 Periplasmic sensor domain found in signal transduction proteins EBA00_07080 PF00672 HAMP domain EBA00_07085 PF17149 Periplasmic sensor domain found in signal transduction proteins EBA00_07085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_07085 PF01627 Hpt domain EBA00_07085 PF00072 Response regulator receiver domain EBA00_07085 PF00672 HAMP domain EBA00_07085 PF00512 His Kinase A (phospho-acceptor) domain EBA00_07095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_07095 PF00672 HAMP domain EBA00_07095 PF00512 His Kinase A (phospho-acceptor) domain EBA00_07095 PF01627 Hpt domain EBA00_07095 PF17149 Periplasmic sensor domain found in signal transduction proteins EBA00_07095 PF00072 Response regulator receiver domain EBA00_07120 PF05598 Transposase domain (DUF772) EBA00_07135 PF01381 Helix-turn-helix EBA00_07135 PF09856 Predicted transcriptional regulator (DUF2083) EBA00_07135 PF06114 IrrE N-terminal-like domain EBA00_07140 PF00171 Aldehyde dehydrogenase family EBA00_07145 PF02770 Acyl-CoA dehydrogenase, middle domain EBA00_07145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EBA00_07145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EBA00_07150 PF00378 Enoyl-CoA hydratase/isomerase EBA00_07155 PF00378 Enoyl-CoA hydratase/isomerase EBA00_07155 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EBA00_07155 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EBA00_07160 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EBA00_07160 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EBA00_07165 PF01545 Cation efflux family EBA00_07170 PF00378 Enoyl-CoA hydratase/isomerase EBA00_07170 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EBA00_07170 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EBA00_07175 PF08281 Sigma-70, region 4 EBA00_07175 PF04542 Sigma-70 region 2 EBA00_07185 PF13180 PDZ domain EBA00_07190 PF06421 GTP-binding protein LepA C-terminus EBA00_07190 PF00679 Elongation factor G C-terminus EBA00_07190 PF00009 Elongation factor Tu GTP binding domain EBA00_07190 PF03144 Elongation factor Tu domain 2 EBA00_07195 PF10502 Signal peptidase, peptidase S26 EBA00_07205 PF14622 Ribonuclease-III-like EBA00_07205 PF00035 Double-stranded RNA binding motif EBA00_07210 PF01926 50S ribosome-binding GTPase EBA00_07210 PF07650 KH domain EBA00_07215 PF02565 Recombination protein O C terminal EBA00_07215 PF11967 Recombination protein O N terminal EBA00_07225 PF05958 tRNA (Uracil-5-)-methyltransferase EBA00_07240 PF01593 Flavin containing amine oxidoreductase EBA00_07245 PF04244 Deoxyribodipyrimidine photo-lyase-related protein EBA00_07250 PF00933 Glycosyl hydrolase family 3 N terminal domain EBA00_07260 PF01048 Phosphorylase superfamily EBA00_07265 PF00313 'Cold-shock' DNA-binding domain EBA00_07285 PF08494 DEAD/H associated EBA00_07285 PF00270 DEAD/DEAH box helicase EBA00_07285 PF00271 Helicase conserved C-terminal domain EBA00_07290 PF04675 DNA ligase N terminus EBA00_07290 PF04679 ATP dependent DNA ligase C terminal region EBA00_07290 PF01068 ATP dependent DNA ligase domain EBA00_07300 PF04679 ATP dependent DNA ligase C terminal region EBA00_07300 PF04675 DNA ligase N terminus EBA00_07300 PF01068 ATP dependent DNA ligase domain EBA00_07315 PF00072 Response regulator receiver domain EBA00_07315 PF00990 Diguanylate cyclase, GGDEF domain EBA00_07330 PF02803 Thiolase, C-terminal domain EBA00_07330 PF00108 Thiolase, N-terminal domain EBA00_07335 PF03797 Autotransporter beta-domain EBA00_07335 PF12951 Passenger-associated-transport-repeat EBA00_07335 PF00082 Subtilase family EBA00_07340 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EBA00_07340 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EBA00_07350 PF01863 Protein of unknown function DUF45 EBA00_07355 PF07043 Protein of unknown function (DUF1328) EBA00_07365 PF01258 Prokaryotic dksA/traR C4-type zinc finger EBA00_07375 PF04542 Sigma-70 region 2 EBA00_07375 PF08281 Sigma-70, region 4 EBA00_07375 PF12680 SnoaL-like domain EBA00_07410 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EBA00_07420 PF03831 PhnA domain EBA00_07420 PF08274 PhnA Zinc-Ribbon EBA00_07435 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EBA00_07440 PF07690 Major Facilitator Superfamily EBA00_07480 PF03706 Lysylphosphatidylglycerol synthase TM region EBA00_07480 PF09924 Uncharacterised conserved protein (DUF2156) EBA00_07490 PF01042 Endoribonuclease L-PSP EBA00_07535 PF04545 Sigma-70, region 4 EBA00_07535 PF04542 Sigma-70 region 2 EBA00_07555 PF04060 Putative Fe-S cluster EBA00_07565 PF01588 Putative tRNA binding domain EBA00_07565 PF09334 tRNA synthetases class I (M) EBA00_07575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EBA00_07580 PF00324 Amino acid permease EBA00_07585 PF02574 Homocysteine S-methyltransferase EBA00_07600 PF02592 Putative vitamin uptake transporter EBA00_07675 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit EBA00_07680 PF07733 Bacterial DNA polymerase III alpha NTPase domain EBA00_07680 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EBA00_07680 PF14579 Helix-hairpin-helix motif EBA00_07680 PF02811 PHP domain EBA00_07680 PF01336 OB-fold nucleic acid binding domain EBA00_07685 PF01351 Ribonuclease HII EBA00_07690 PF02684 Lipid-A-disaccharide synthetase EBA00_07695 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 EBA00_07695 PF00132 Bacterial transferase hexapeptide (six repeats) EBA00_07700 PF07977 FabA-like domain EBA00_07705 PF00132 Bacterial transferase hexapeptide (six repeats) EBA00_07705 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD EBA00_07715 PF07244 Surface antigen variable number repeat EBA00_07715 PF01103 Surface antigen EBA00_07720 PF02163 Peptidase family M50 EBA00_07720 PF17820 PDZ domain EBA00_07725 PF13288 DXP reductoisomerase C-terminal domain EBA00_07725 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain EBA00_07725 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase EBA00_07735 PF01255 Putative undecaprenyl diphosphate synthase EBA00_07740 PF01765 Ribosome recycling factor EBA00_07745 PF00696 Amino acid kinase family EBA00_07755 PF00889 Elongation factor TS EBA00_07760 PF00318 Ribosomal protein S2 EBA00_07795 PF00557 Metallopeptidase family M24 EBA00_07800 PF08335 GlnD PII-uridylyltransferase EBA00_07800 PF01909 Nucleotidyltransferase domain EBA00_07800 PF01966 HD domain EBA00_07805 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal EBA00_07805 PF14602 Hexapeptide repeat of succinyl-transferase EBA00_07805 PF00132 Bacterial transferase hexapeptide (six repeats) EBA00_07815 PF03960 ArsC family EBA00_07825 PF07687 Peptidase dimerisation domain EBA00_07825 PF01546 Peptidase family M20/M25/M40 EBA00_07830 PF13537 Glutamine amidotransferase domain EBA00_07830 PF00733 Asparagine synthase EBA00_07840 PF07715 TonB-dependent Receptor Plug Domain EBA00_07840 PF00593 TonB dependent receptor EBA00_07850 PF01804 Penicillin amidase EBA00_07855 PF00210 Ferritin-like domain EBA00_07865 PF00521 DNA gyrase/topoisomerase IV, subunit A EBA00_07865 PF03989 DNA gyrase C-terminal domain, beta-propeller EBA00_07870 PF12833 Helix-turn-helix domain EBA00_07880 PF02321 Outer membrane efflux protein EBA00_07885 PF00529 HlyD membrane-fusion protein of T1SS EBA00_07885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EBA00_07890 PF07690 Major Facilitator Superfamily EBA00_07895 PF00144 Beta-lactamase EBA00_07915 PF01915 Glycosyl hydrolase family 3 C-terminal domain EBA00_07915 PF14310 Fibronectin type III-like domain EBA00_07915 PF00933 Glycosyl hydrolase family 3 N terminal domain EBA00_07950 PF12802 MarR family EBA00_07960 PF04542 Sigma-70 region 2 EBA00_07960 PF08281 Sigma-70, region 4 EBA00_07985 PF00255 Glutathione peroxidase EBA00_07990 PF00175 Oxidoreductase NAD-binding domain EBA00_07990 PF00970 Oxidoreductase FAD-binding domain EBA00_07995 PF00005 ABC transporter EBA00_08005 PF05681 Fumarate hydratase (Fumerase) EBA00_08005 PF05683 Fumarase C-terminus EBA00_08020 PF05598 Transposase domain (DUF772) EBA00_08020 PF01609 Transposase DDE domain EBA00_08040 PF05598 Transposase domain (DUF772) EBA00_08040 PF01609 Transposase DDE domain EBA00_08050 PF05598 Transposase domain (DUF772) EBA00_08055 PF00672 HAMP domain EBA00_08055 PF02203 Tar ligand binding domain homologue EBA00_08055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA00_08080 PF00313 'Cold-shock' DNA-binding domain EBA00_08095 PF00899 ThiF family EBA00_08100 PF01026 TatD related DNase EBA00_08125 PF13417 Glutathione S-transferase, N-terminal domain EBA00_08130 PF13537 Glutamine amidotransferase domain EBA00_08130 PF00733 Asparagine synthase EBA00_08135 PF03358 NADPH-dependent FMN reductase EBA00_08140 PF00772 DnaB-like helicase N terminal domain EBA00_08140 PF03796 DnaB-like helicase C terminal domain EBA00_08145 PF03441 FAD binding domain of DNA photolyase EBA00_08145 PF00875 DNA photolyase EBA00_08165 PF05736 OprF membrane domain EBA00_08165 PF00691 OmpA family EBA00_08180 PF00990 Diguanylate cyclase, GGDEF domain EBA00_08180 PF08448 PAS fold EBA00_08200 PF05598 Transposase domain (DUF772) EBA00_08210 PF00120 Glutamine synthetase, catalytic domain EBA00_08215 PF04204 Homoserine O-succinyltransferase EBA00_08220 PF01810 LysE type translocator EBA00_08225 PF07722 Peptidase C26 EBA00_08235 PF01053 Cys/Met metabolism PLP-dependent enzyme EBA00_08275 PF05598 Transposase domain (DUF772) EBA00_08280 PF01609 Transposase DDE domain EBA00_08280 PF05598 Transposase domain (DUF772) EBA00_08300 PF00082 Subtilase family EBA00_08305 PF01668 SmpB protein EBA00_08315 PF03658 RnfH family Ubiquitin EBA00_08325 PF04355 SmpA / OmlA family EBA00_08330 PF01475 Ferric uptake regulator family EBA00_08335 PF02463 RecF/RecN/SMC N terminal domain EBA00_08340 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding EBA00_08340 PF01628 HrcA protein C terminal domain EBA00_08345 PF01025 GrpE EBA00_08350 PF00012 Hsp70 protein EBA00_08355 PF00684 DnaJ central domain EBA00_08355 PF00226 DnaJ domain EBA00_08355 PF01556 DnaJ C terminal domain EBA00_08365 PF08543 Phosphomethylpyrimidine kinase EBA00_08395 PF00664 ABC transporter transmembrane region EBA00_08395 PF00005 ABC transporter EBA00_08400 PF01205 Uncharacterized protein family UPF0029 EBA00_08405 PF03641 Possible lysine decarboxylase EBA00_08410 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA00_08410 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EBA00_08415 PF00364 Biotin-requiring enzyme EBA00_08415 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EBA00_08415 PF02817 e3 binding domain EBA00_08420 PF16870 2-oxoglutarate dehydrogenase C-terminal EBA00_08420 PF00676 Dehydrogenase E1 component EBA00_08420 PF16078 2-oxoglutarate dehydrogenase N-terminus EBA00_08420 PF02779 Transketolase, pyrimidine binding domain EBA00_08430 PF08007 Cupin superfamily protein EBA00_08445 PF08328 Adenylosuccinate lyase C-terminal EBA00_08445 PF00206 Lyase EBA00_08460 PF01609 Transposase DDE domain EBA00_08460 PF05598 Transposase domain (DUF772) EBA00_08470 PF10415 Fumarase C C-terminus EBA00_08470 PF00206 Lyase EBA00_08500 PF00005 ABC transporter EBA00_08505 PF00392 Bacterial regulatory proteins, gntR family EBA00_08515 PF00255 Glutathione peroxidase EBA00_08520 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EBA00_08520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EBA00_08525 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EBA00_08525 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EBA00_08525 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EBA00_08530 PF04102 SlyX EBA00_08550 PF07690 Major Facilitator Superfamily EBA00_08555 PF00294 pfkB family carbohydrate kinase EBA00_08565 PF02310 B12 binding domain EBA00_08565 PF02607 B12 binding domain EBA00_08565 PF02574 Homocysteine S-methyltransferase EBA00_08565 PF00809 Pterin binding enzyme EBA00_08565 PF02965 Vitamin B12 dependent methionine synthase, activation domain EBA00_08570 PF00809 Pterin binding enzyme EBA00_08570 PF02574 Homocysteine S-methyltransferase EBA00_08575 PF01209 ubiE/COQ5 methyltransferase family EBA00_08580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EBA00_08580 PF02770 Acyl-CoA dehydrogenase, middle domain EBA00_08580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EBA00_08610 PF08206 Ribonuclease B OB domain EBA00_08610 PF08461 Ribonuclease R winged-helix domain EBA00_08610 PF17876 Cold shock domain EBA00_08610 PF00575 S1 RNA binding domain EBA00_08610 PF00773 RNB domain EBA00_08625 PF00588 SpoU rRNA Methylase family EBA00_08625 PF08032 RNA 2'-O ribose methyltransferase substrate binding EBA00_08635 PF00929 Exonuclease EBA00_08645 PF01895 PhoU domain EBA00_08650 PF00005 ABC transporter EBA00_08655 PF00528 Binding-protein-dependent transport system inner membrane component EBA00_08660 PF00528 Binding-protein-dependent transport system inner membrane component EBA00_08665 PF12849 PBP superfamily domain EBA00_08670 PF12849 PBP superfamily domain EBA00_08690 PF00916 Sulfate permease family EBA00_08690 PF01740 STAS domain EBA00_08695 PF00633 Helix-hairpin-helix motif EBA00_08695 PF10576 Iron-sulfur binding domain of endonuclease III EBA00_08695 PF00730 HhH-GPD superfamily base excision DNA repair protein EBA00_08705 PF00378 Enoyl-CoA hydratase/isomerase EBA00_08710 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EBA00_08710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EBA00_08715 PF00293 NUDIX domain EBA00_08720 PF00581 Rhodanese-like domain EBA00_08760 PF01170 Putative RNA methylase family UPF0020 EBA00_08760 PF10672 S-adenosylmethionine-dependent methyltransferase EBA00_08760 PF02926 THUMP domain EBA00_08775 PF01513 ATP-NAD kinase EBA00_08790 PF00248 Aldo/keto reductase family EBA00_08800 PF08411 Exonuclease C-terminal EBA00_08800 PF00929 Exonuclease EBA00_08805 PF01494 FAD binding domain EBA00_08810 PF00266 Aminotransferase class-V EBA00_08830 PF06052 3-hydroxyanthranilic acid dioxygenase EBA00_08835 PF00484 Carbonic anhydrase EBA00_08860 PF00152 tRNA synthetases class II (D, K and N) EBA00_08860 PF01336 OB-fold nucleic acid binding domain EBA00_08870 PF01521 Iron-sulphur cluster biosynthesis EBA00_08875 PF01250 Ribosomal protein S6 EBA00_08880 PF01084 Ribosomal protein S18 EBA00_08885 PF01281 Ribosomal protein L9, N-terminal domain EBA00_08885 PF03948 Ribosomal protein L9, C-terminal domain EBA00_08890 PF02463 RecF/RecN/SMC N terminal domain EBA00_08895 PF04354 ZipA, C-terminal FtsZ-binding domain EBA00_08900 PF00155 Aminotransferase class I and II EBA00_08910 PF00152 tRNA synthetases class II (D, K and N) EBA00_08925 PF01008 Initiation factor 2 subunit family EBA00_08930 PF03989 DNA gyrase C-terminal domain, beta-propeller EBA00_08930 PF00521 DNA gyrase/topoisomerase IV, subunit A EBA00_08945 PF03129 Anticodon binding domain EBA00_08945 PF02824 TGS domain EBA00_08945 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EBA00_08945 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EBA00_08950 PF00707 Translation initiation factor IF-3, C-terminal domain EBA00_08950 PF05198 Translation initiation factor IF-3, N-terminal domain EBA00_08955 PF01632 Ribosomal protein L35 EBA00_08960 PF00453 Ribosomal protein L20 EBA00_08965 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EBA00_08965 PF01409 tRNA synthetases class II core domain (F) EBA00_08970 PF03147 Ferredoxin-fold anticodon binding domain EBA00_08970 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EBA00_08970 PF03484 tRNA synthetase B5 domain EBA00_08970 PF01588 Putative tRNA binding domain EBA00_08970 PF03483 B3/4 domain EBA00_08975 PF00216 Bacterial DNA-binding protein EBA00_08980 PF13411 MerR HTH family regulatory protein EBA00_09000 PF02397 Bacterial sugar transferase EBA00_09020 PF13439 Glycosyltransferase Family 4 EBA00_09020 PF00534 Glycosyl transferases group 1 EBA00_09030 PF14667 Polysaccharide biosynthesis C-terminal domain EBA00_09045 PF03808 Glycosyl transferase WecB/TagA/CpsF family EBA00_09065 PF02779 Transketolase, pyrimidine binding domain EBA00_09065 PF02780 Transketolase, C-terminal domain EBA00_09065 PF13292 1-deoxy-D-xylulose-5-phosphate synthase EBA00_09075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EBA00_09075 PF02770 Acyl-CoA dehydrogenase, middle domain EBA00_09075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EBA00_09075 PF12806 Acetyl-CoA dehydrogenase C-terminal like EBA00_09085 PF08212 Lipocalin-like domain EBA00_09115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_09115 PF13426 PAS domain EBA00_09115 PF00072 Response regulator receiver domain EBA00_09120 PF04362 Bacterial Fe(2+) trafficking EBA00_09125 PF00633 Helix-hairpin-helix motif EBA00_09125 PF14815 NUDIX domain EBA00_09125 PF10576 Iron-sulfur binding domain of endonuclease III EBA00_09125 PF00730 HhH-GPD superfamily base excision DNA repair protein EBA00_09140 PF00448 SRP54-type protein, GTPase domain EBA00_09140 PF02881 SRP54-type protein, helical bundle domain EBA00_09150 PF05544 Proline racemase EBA00_09155 PF01266 FAD dependent oxidoreductase EBA00_09165 PF04324 BFD-like [2Fe-2S] binding domain EBA00_09165 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA00_09170 PF00701 Dihydrodipicolinate synthetase family EBA00_09175 PF00171 Aldehyde dehydrogenase family EBA00_09180 PF01321 Creatinase/Prolidase N-terminal domain EBA00_09180 PF00557 Metallopeptidase family M24 EBA00_09195 PF13520 Amino acid permease EBA00_09205 PF01609 Transposase DDE domain EBA00_09205 PF05598 Transposase domain (DUF772) EBA00_09210 PF05598 Transposase domain (DUF772) EBA00_09210 PF01609 Transposase DDE domain EBA00_09250 PF09286 Pro-kumamolisin, activation domain EBA00_09250 PF00082 Subtilase family EBA00_09265 PF07715 TonB-dependent Receptor Plug Domain EBA00_09265 PF00593 TonB dependent receptor EBA00_09270 PF07532 Bacterial Ig-like domain (group 4) EBA00_09275 PF04616 Glycosyl hydrolases family 43 EBA00_09300 PF05598 Transposase domain (DUF772) EBA00_09310 PF00183 Hsp90 protein EBA00_09310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_09320 PF01467 Cytidylyltransferase-like EBA00_09335 PF00037 4Fe-4S binding domain EBA00_09400 PF02547 Queuosine biosynthesis protein EBA00_09405 PF01702 Queuine tRNA-ribosyltransferase EBA00_09410 PF02699 Preprotein translocase subunit EBA00_09415 PF07549 SecD/SecF GG Motif EBA00_09415 PF02355 Protein export membrane protein EBA00_09415 PF13721 SecD export protein N-terminal TM region EBA00_09420 PF07549 SecD/SecF GG Motif EBA00_09420 PF02355 Protein export membrane protein EBA00_09440 PF05598 Transposase domain (DUF772) EBA00_09460 PF16671 Actin cross-linking domain EBA00_09460 PF04717 Type VI secretion system, phage-baseplate injector EBA00_09470 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EBA00_09475 PF00294 pfkB family carbohydrate kinase EBA00_09480 PF05524 PEP-utilising enzyme, N-terminal EBA00_09480 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EBA00_09480 PF00381 PTS HPr component phosphorylation site EBA00_09480 PF02896 PEP-utilising enzyme, TIM barrel domain EBA00_09480 PF00391 PEP-utilising enzyme, mobile domain EBA00_09485 PF00356 Bacterial regulatory proteins, lacI family EBA00_09500 PF00873 AcrB/AcrD/AcrF family EBA00_09505 PF00529 HlyD membrane-fusion protein of T1SS EBA00_09505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EBA00_09515 PF05088 Bacterial NAD-glutamate dehydrogenase EBA00_09525 PF01609 Transposase DDE domain EBA00_09525 PF05598 Transposase domain (DUF772) EBA00_09535 PF05598 Transposase domain (DUF772) EBA00_09575 PF01609 Transposase DDE domain EBA00_09575 PF05598 Transposase domain (DUF772) EBA00_09580 PF00072 Response regulator receiver domain EBA00_09585 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EBA00_09585 PF00512 His Kinase A (phospho-acceptor) domain EBA00_09585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_09585 PF00072 Response regulator receiver domain EBA00_09585 PF01627 Hpt domain EBA00_09585 PF00672 HAMP domain EBA00_09590 PF04286 Protein of unknown function (DUF445) EBA00_09600 PF00005 ABC transporter EBA00_09605 PF00202 Aminotransferase class-III EBA00_09615 PF07690 Major Facilitator Superfamily EBA00_09620 PF02634 FdhD/NarQ family EBA00_09625 PF00384 Molybdopterin oxidoreductase EBA00_09635 PF00083 Sugar (and other) transporter EBA00_09635 PF07690 Major Facilitator Superfamily EBA00_09640 PF00072 Response regulator receiver domain EBA00_09640 PF00990 Diguanylate cyclase, GGDEF domain EBA00_09645 PF01266 FAD dependent oxidoreductase EBA00_09650 PF00120 Glutamine synthetase, catalytic domain EBA00_09660 PF00120 Glutamine synthetase, catalytic domain EBA00_09675 PF01609 Transposase DDE domain EBA00_09675 PF05598 Transposase domain (DUF772) EBA00_09690 PF13533 Biotin-lipoyl like EBA00_09695 PF07690 Major Facilitator Superfamily EBA00_09700 PF02321 Outer membrane efflux protein EBA00_09705 PF08402 TOBE domain EBA00_09705 PF00005 ABC transporter EBA00_09715 PF00528 Binding-protein-dependent transport system inner membrane component EBA00_09720 PF00528 Binding-protein-dependent transport system inner membrane component EBA00_09725 PF00171 Aldehyde dehydrogenase family EBA00_09740 PF03471 Transporter associated domain EBA00_09740 PF00571 CBS domain EBA00_09750 PF02130 Uncharacterized protein family UPF0054 EBA00_09760 PF02562 PhoH-like protein EBA00_09765 PF01938 TRAM domain EBA00_09765 PF00919 Uncharacterized protein family UPF0004 EBA00_09765 PF04055 Radical SAM superfamily EBA00_09790 PF01464 Transglycosylase SLT domain EBA00_09800 PF00355 Rieske [2Fe-2S] domain EBA00_09800 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal EBA00_09805 PF00032 Cytochrome b(C-terminal)/b6/petD EBA00_09805 PF00033 Cytochrome b/b6/petB EBA00_09810 PF02167 Cytochrome C1 family EBA00_09815 PF02798 Glutathione S-transferase, N-terminal domain EBA00_09815 PF00043 Glutathione S-transferase, C-terminal domain EBA00_09820 PF04386 Stringent starvation protein B EBA00_09850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA00_09850 PF00672 HAMP domain EBA00_09850 PF02743 Cache domain EBA00_09855 PF01584 CheW-like domain EBA00_09890 PF00570 HRDC domain EBA00_09890 PF01612 3'-5' exonuclease EBA00_09905 PF03781 Sulfatase-modifying factor enzyme 1 EBA00_09915 PF01609 Transposase DDE domain EBA00_09915 PF05598 Transposase domain (DUF772) EBA00_09930 PF13742 OB-fold nucleic acid binding domain EBA00_09930 PF02601 Exonuclease VII, large subunit EBA00_09935 PF08331 Domain of unknown function (DUF1730) EBA00_09940 PF03853 YjeF-related protein N-terminus EBA00_09940 PF01256 Carbohydrate kinase EBA00_09945 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE EBA00_09950 PF01520 N-acetylmuramoyl-L-alanine amidase EBA00_09950 PF11741 AMIN domain EBA00_09955 PF08676 MutL C terminal dimerisation domain EBA00_09955 PF01119 DNA mismatch repair protein, C-terminal domain EBA00_09970 PF07879 PHB/PHA accumulation regulator DNA-binding domain EBA00_09970 PF05233 PHB accumulation regulatory domain EBA00_09975 PF00106 short chain dehydrogenase EBA00_09980 PF00749 tRNA synthetases class I (E and Q), catalytic domain EBA00_09985 PF01435 Peptidase family M48 EBA00_09990 PF00990 Diguanylate cyclase, GGDEF domain EBA00_09990 PF00498 FHA domain EBA00_09990 PF00563 EAL domain EBA00_10000 PF07152 YaeQ protein EBA00_10005 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 EBA00_10010 PF00313 'Cold-shock' DNA-binding domain EBA00_10015 PF02798 Glutathione S-transferase, N-terminal domain EBA00_10015 PF14497 Glutathione S-transferase, C-terminal domain EBA00_10025 PF02696 Uncharacterized ACR, YdiU/UPF0061 family EBA00_10030 PF00156 Phosphoribosyl transferase domain EBA00_10035 PF00271 Helicase conserved C-terminal domain EBA00_10035 PF03880 DbpA RNA binding domain EBA00_10035 PF00270 DEAD/DEAH box helicase EBA00_10060 PF00545 ribonuclease EBA00_10065 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EBA00_10065 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EBA00_10070 PF00459 Inositol monophosphatase family EBA00_10075 PF00588 SpoU rRNA Methylase family EBA00_10085 PF00563 EAL domain EBA00_10085 PF00990 Diguanylate cyclase, GGDEF domain EBA00_10085 PF13188 PAS domain EBA00_10085 PF03707 Bacterial signalling protein N terminal repeat EBA00_10090 PF04055 Radical SAM superfamily EBA00_10095 PF01132 Elongation factor P (EF-P) OB domain EBA00_10095 PF08207 Elongation factor P (EF-P) KOW-like domain EBA00_10095 PF09285 Elongation factor P, C-terminal EBA00_10110 PF01979 Amidohydrolase family EBA00_10120 PF13419 Haloacid dehalogenase-like hydrolase EBA00_10135 PF00295 Glycosyl hydrolases family 28 EBA00_10145 PF01095 Pectinesterase EBA00_10160 PF05985 Ethanolamine ammonia-lyase light chain (EutC) EBA00_10170 PF08460 Bacterial SH3 domain EBA00_10170 PF01551 Peptidase family M23 EBA00_10175 PF01979 Amidohydrolase family EBA00_10180 PF01809 Putative membrane protein insertion efficiency factor EBA00_10185 PF01258 Prokaryotic dksA/traR C4-type zinc finger EBA00_10200 PF02657 Fe-S metabolism associated domain EBA00_10205 PF01406 tRNA synthetases class I (C) catalytic domain EBA00_10205 PF09190 DALR domain EBA00_10215 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EBA00_10215 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EBA00_10220 PF00764 Arginosuccinate synthase EBA00_10225 PF01546 Peptidase family M20/M25/M40 EBA00_10225 PF07687 Peptidase dimerisation domain EBA00_10230 PF00696 Amino acid kinase family EBA00_10230 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase EBA00_10240 PF01118 Semialdehyde dehydrogenase, NAD binding domain EBA00_10245 PF00206 Lyase EBA00_10260 PF00696 Amino acid kinase family EBA00_10260 PF01472 PUA domain EBA00_10265 PF00171 Aldehyde dehydrogenase family EBA00_10270 PF02129 X-Pro dipeptidyl-peptidase (S15 family) EBA00_10270 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain EBA00_10300 PF01654 Cytochrome bd terminal oxidase subunit I EBA00_10310 PF00005 ABC transporter EBA00_10310 PF00664 ABC transporter transmembrane region EBA00_10315 PF00005 ABC transporter EBA00_10315 PF00664 ABC transporter transmembrane region EBA00_10325 PF00313 'Cold-shock' DNA-binding domain EBA00_10330 PF00561 alpha/beta hydrolase fold EBA00_10340 PF03918 Cytochrome C biogenesis protein EBA00_10345 PF08534 Redoxin EBA00_10350 PF01578 Cytochrome C assembly protein EBA00_10350 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal EBA00_10355 PF03100 CcmE EBA00_10365 PF01578 Cytochrome C assembly protein EBA00_10370 PF03379 CcmB protein EBA00_10375 PF00005 ABC transporter EBA00_10380 PF00155 Aminotransferase class I and II EBA00_10385 PF00795 Carbon-nitrogen hydrolase EBA00_10400 PF01479 S4 domain EBA00_10400 PF00849 RNA pseudouridylate synthase EBA00_10405 PF04079 Segregation and condensation complex subunit ScpB EBA00_10410 PF02616 Segregation and condensation protein ScpA EBA00_10415 PF03795 YCII-related domain EBA00_10425 PF00356 Bacterial regulatory proteins, lacI family EBA00_10445 PF00528 Binding-protein-dependent transport system inner membrane component EBA00_10450 PF00528 Binding-protein-dependent transport system inner membrane component EBA00_10475 PF00795 Carbon-nitrogen hydrolase EBA00_10485 PF04371 Porphyromonas-type peptidyl-arginine deiminase EBA00_10495 PF00444 Ribosomal protein L36 EBA00_10500 PF02224 Cytidylate kinase EBA00_10505 PF00575 S1 RNA binding domain EBA00_10510 PF00216 Bacterial DNA-binding protein EBA00_10520 PF18073 Rubredoxin metal binding domain EBA00_10525 PF00953 Glycosyl transferase family 4 EBA00_10530 PF02719 Polysaccharide biosynthesis protein EBA00_10535 PF00483 Nucleotidyl transferase EBA00_10550 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EBA00_10550 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EBA00_10555 PF00478 IMP dehydrogenase / GMP reductase domain EBA00_10555 PF00571 CBS domain EBA00_10560 PF00117 Glutamine amidotransferase class-I EBA00_10560 PF00958 GMP synthase C terminal domain EBA00_10560 PF02540 NAD synthase EBA00_10565 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) EBA00_10570 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EBA00_10570 PF00361 Proton-conducting membrane transporter EBA00_10570 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus EBA00_10575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA00_10575 PF03466 LysR substrate binding domain EBA00_10595 PF03601 Conserved hypothetical protein 698 EBA00_10600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA00_10600 PF03466 LysR substrate binding domain EBA00_10630 PF01566 Natural resistance-associated macrophage protein EBA00_10635 PF02742 Iron dependent repressor, metal binding and dimerisation domain EBA00_10635 PF01325 Iron dependent repressor, N-terminal DNA binding domain EBA00_10640 PF14437 MafB19-like deaminase EBA00_10645 PF00929 Exonuclease EBA00_10650 PF00924 Mechanosensitive ion channel EBA00_10650 PF05552 Conserved TM helix EBA00_10655 PF02896 PEP-utilising enzyme, TIM barrel domain EBA00_10655 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain EBA00_10655 PF00391 PEP-utilising enzyme, mobile domain EBA00_10660 PF03618 Kinase/pyrophosphorylase EBA00_10690 PF00561 alpha/beta hydrolase fold EBA00_10705 PF00355 Rieske [2Fe-2S] domain EBA00_10705 PF01266 FAD dependent oxidoreductase EBA00_10715 PF17674 HHH domain EBA00_10715 PF09371 Tex-like protein N-terminal domain EBA00_10715 PF00575 S1 RNA binding domain EBA00_10715 PF16921 Tex protein YqgF-like domain EBA00_10730 PF00512 His Kinase A (phospho-acceptor) domain EBA00_10730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_10730 PF00072 Response regulator receiver domain EBA00_10730 PF09308 LuxQ, periplasmic EBA00_10780 PF00034 Cytochrome c EBA00_10815 PF01081 KDPG and KHG aldolase EBA00_10820 PF00920 Dehydratase family EBA00_10825 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EBA00_10830 PF02685 Glucokinase EBA00_10835 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EBA00_10835 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EBA00_10840 PF17912 MalK OB fold domain EBA00_10840 PF00005 ABC transporter EBA00_10850 PF01571 Aminomethyltransferase folate-binding domain EBA00_10860 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EBA00_10865 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EBA00_10870 PF00890 FAD binding domain EBA00_10870 PF02910 Fumarate reductase flavoprotein C-term EBA00_10880 PF13085 2Fe-2S iron-sulfur cluster binding domain EBA00_10885 PF03937 Flavinator of succinate dehydrogenase EBA00_10895 PF12704 MacB-like periplasmic core domain EBA00_10895 PF02687 FtsX-like permease family EBA00_10900 PF00005 ABC transporter EBA00_10915 PF00753 Metallo-beta-lactamase superfamily EBA00_10915 PF03772 Competence protein EBA00_10920 PF01618 MotA/TolQ/ExbB proton channel family EBA00_10930 PF00005 ABC transporter EBA00_10930 PF00664 ABC transporter transmembrane region EBA00_10935 PF02606 Tetraacyldisaccharide-1-P 4'-kinase EBA00_10940 PF02348 Cytidylyltransferase EBA00_10945 PF01451 Low molecular weight phosphotyrosine protein phosphatase EBA00_10955 PF01541 GIY-YIG catalytic domain EBA00_10955 PF02151 UvrB/uvrC motif EBA00_10955 PF08459 UvrC Helix-hairpin-helix N-terminal EBA00_10960 PF01066 CDP-alcohol phosphatidyltransferase EBA00_10985 PF01648 4'-phosphopantetheinyl transferase superfamily EBA00_10985 PF17837 4'-phosphopantetheinyl transferase N-terminal domain EBA00_10995 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EBA00_10995 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EBA00_10995 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EBA00_11005 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EBA00_11020 PF00072 Response regulator receiver domain EBA00_11020 PF00196 Bacterial regulatory proteins, luxR family EBA00_11030 PF00575 S1 RNA binding domain EBA00_11030 PF10150 Ribonuclease E/G family EBA00_11030 PF12111 Polyribonucleotide phosphorylase C terminal EBA00_11035 PF00849 RNA pseudouridylate synthase EBA00_11035 PF01479 S4 domain EBA00_11040 PF11737 Protein of unknown function (DUF3300) EBA00_11055 PF01329 Pterin 4 alpha carbinolamine dehydratase EBA00_11060 PF01106 NifU-like domain EBA00_11070 PF05598 Transposase domain (DUF772) EBA00_11070 PF01609 Transposase DDE domain EBA00_11120 PF05638 Type VI secretion system effector, Hcp EBA00_11145 PF00004 ATPase family associated with various cellular activities (AAA) EBA00_11145 PF07724 AAA domain (Cdc48 subfamily) EBA00_11145 PF17871 AAA lid domain EBA00_11145 PF10431 C-terminal, D2-small domain, of ClpB protein EBA00_11155 PF05598 Transposase domain (DUF772) EBA00_11155 PF01609 Transposase DDE domain EBA00_11170 PF00665 Integrase core domain EBA00_11170 PF13936 Helix-turn-helix domain EBA00_11195 PF16671 Actin cross-linking domain EBA00_11195 PF04717 Type VI secretion system, phage-baseplate injector EBA00_11235 PF00069 Protein kinase domain EBA00_11255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA00_11255 PF03466 LysR substrate binding domain EBA00_11260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_11260 PF00512 His Kinase A (phospho-acceptor) domain EBA00_11265 PF00034 Cytochrome c EBA00_11265 PF03150 Di-haem cytochrome c peroxidase EBA00_11270 PF00072 Response regulator receiver domain EBA00_11270 PF00486 Transcriptional regulatory protein, C terminal EBA00_11320 PF00529 HlyD membrane-fusion protein of T1SS EBA00_11320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EBA00_11325 PF00873 AcrB/AcrD/AcrF family EBA00_11355 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain EBA00_11355 PF12706 Beta-lactamase superfamily domain EBA00_11360 PF03621 MbtH-like protein EBA00_11365 PF00005 ABC transporter EBA00_11365 PF00664 ABC transporter transmembrane region EBA00_11370 PF00378 Enoyl-CoA hydratase/isomerase EBA00_11375 PF00155 Aminotransferase class I and II EBA00_11380 PF00378 Enoyl-CoA hydratase/isomerase EBA00_11390 PF02797 Chalcone and stilbene synthases, C-terminal domain EBA00_11390 PF00195 Chalcone and stilbene synthases, N-terminal domain EBA00_11400 PF00975 Thioesterase domain EBA00_11400 PF00550 Phosphopantetheine attachment site EBA00_11400 PF00668 Condensation domain EBA00_11400 PF13193 AMP-binding enzyme C-terminal domain EBA00_11400 PF00501 AMP-binding enzyme EBA00_11400 PF00975 Thioesterase domain EBA00_11400 PF00550 Phosphopantetheine attachment site EBA00_11400 PF00668 Condensation domain EBA00_11400 PF13193 AMP-binding enzyme C-terminal domain EBA00_11400 PF00501 AMP-binding enzyme EBA00_11405 PF00501 AMP-binding enzyme EBA00_11405 PF13193 AMP-binding enzyme C-terminal domain EBA00_11405 PF00975 Thioesterase domain EBA00_11405 PF00668 Condensation domain EBA00_11405 PF00550 Phosphopantetheine attachment site EBA00_11410 PF00550 Phosphopantetheine attachment site EBA00_11410 PF00975 Thioesterase domain EBA00_11410 PF00501 AMP-binding enzyme EBA00_11410 PF13193 AMP-binding enzyme C-terminal domain EBA00_11410 PF00668 Condensation domain EBA00_11415 PF00550 Phosphopantetheine attachment site EBA00_11415 PF00668 Condensation domain EBA00_11415 PF13193 AMP-binding enzyme C-terminal domain EBA00_11415 PF00501 AMP-binding enzyme EBA00_11420 PF13193 AMP-binding enzyme C-terminal domain EBA00_11420 PF00550 Phosphopantetheine attachment site EBA00_11420 PF00501 AMP-binding enzyme EBA00_11420 PF00668 Condensation domain EBA00_11425 PF13193 AMP-binding enzyme C-terminal domain EBA00_11425 PF00501 AMP-binding enzyme EBA00_11425 PF00668 Condensation domain EBA00_11425 PF00550 Phosphopantetheine attachment site EBA00_11430 PF00550 Phosphopantetheine attachment site EBA00_11430 PF00668 Condensation domain EBA00_11430 PF00501 AMP-binding enzyme EBA00_11430 PF13193 AMP-binding enzyme C-terminal domain EBA00_11435 PF13340 Putative transposase of IS4/5 family (DUF4096) EBA00_11440 PF00501 AMP-binding enzyme EBA00_11440 PF00975 Thioesterase domain EBA00_11440 PF00550 Phosphopantetheine attachment site EBA00_11440 PF00668 Condensation domain EBA00_11440 PF13193 AMP-binding enzyme C-terminal domain EBA00_11460 PF03377 TAL effector repeat EBA00_11465 PF03377 TAL effector repeat EBA00_11470 PF03377 TAL effector repeat EBA00_11475 PF16671 Actin cross-linking domain EBA00_11475 PF04717 Type VI secretion system, phage-baseplate injector EBA00_11485 PF03797 Autotransporter beta-domain EBA00_11485 PF00082 Subtilase family EBA00_11495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EBA00_11500 PF00873 AcrB/AcrD/AcrF family EBA00_11510 PF13426 PAS domain EBA00_11510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_11510 PF00072 Response regulator receiver domain EBA00_11510 PF00512 His Kinase A (phospho-acceptor) domain EBA00_11510 PF08448 PAS fold EBA00_11515 PF00196 Bacterial regulatory proteins, luxR family EBA00_11515 PF00072 Response regulator receiver domain EBA00_11520 PF12951 Passenger-associated-transport-repeat EBA00_11525 PF08447 PAS fold EBA00_11525 PF00990 Diguanylate cyclase, GGDEF domain EBA00_11525 PF08448 PAS fold EBA00_11525 PF00563 EAL domain EBA00_11550 PF05598 Transposase domain (DUF772) EBA00_11550 PF01609 Transposase DDE domain EBA00_11590 PF14824 Sirohaem biosynthesis protein central EBA00_11590 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EBA00_11590 PF10414 Sirohaem synthase dimerisation region EBA00_11615 PF12804 MobA-like NTP transferase domain EBA00_11620 PF03453 MoeA N-terminal region (domain I and II) EBA00_11620 PF00994 Probable molybdopterin binding domain EBA00_11620 PF03454 MoeA C-terminal region (domain IV) EBA00_11640 PF13936 Helix-turn-helix domain EBA00_11640 PF00665 Integrase core domain EBA00_11650 PF00899 ThiF family EBA00_11655 PF05598 Transposase domain (DUF772) EBA00_11665 PF03454 MoeA C-terminal region (domain IV) EBA00_11665 PF00994 Probable molybdopterin binding domain EBA00_11665 PF03453 MoeA N-terminal region (domain I and II) EBA00_11670 PF01926 50S ribosome-binding GTPase EBA00_11670 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EBA00_11675 PF01011 PQQ enzyme repeat EBA00_11675 PF13360 PQQ-like domain EBA00_11685 PF13464 Domain of unknown function (DUF4115) EBA00_11695 PF04055 Radical SAM superfamily EBA00_11700 PF00334 Nucleoside diphosphate kinase EBA00_11710 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EBA00_11710 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EBA00_11710 PF00378 Enoyl-CoA hydratase/isomerase EBA00_11715 PF02803 Thiolase, C-terminal domain EBA00_11715 PF00108 Thiolase, N-terminal domain EBA00_11720 PF00654 Voltage gated chloride channel EBA00_11730 PF02537 CrcB-like protein, Camphor Resistance (CrcB) EBA00_11740 PF12002 MgsA AAA+ ATPase C terminal EBA00_11740 PF16193 AAA C-terminal domain EBA00_11740 PF00004 ATPase family associated with various cellular activities (AAA) EBA00_11755 PF03548 Outer membrane lipoprotein carrier protein LolA EBA00_11765 PF01580 FtsK/SpoIIIE family EBA00_11765 PF09397 Ftsk gamma domain EBA00_11765 PF13491 4TM region of DNA translocase FtsK/SpoIIIE EBA00_11765 PF17854 FtsK alpha domain EBA00_11770 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA00_11785 PF03588 Leucyl/phenylalanyl-tRNA protein transferase EBA00_11790 PF01176 Translation initiation factor 1A / IF-1 EBA00_11795 PF02861 Clp amino terminal domain, pathogenicity island component EBA00_11795 PF00004 ATPase family associated with various cellular activities (AAA) EBA00_11795 PF17871 AAA lid domain EBA00_11795 PF10431 C-terminal, D2-small domain, of ClpB protein EBA00_11795 PF07724 AAA domain (Cdc48 subfamily) EBA00_11800 PF02617 ATP-dependent Clp protease adaptor protein ClpS EBA00_11805 PF00293 NUDIX domain EBA00_11815 PF04356 Protein of unknown function (DUF489) EBA00_11820 PF12729 Four helix bundle sensory module for signal transduction EBA00_11820 PF00672 HAMP domain EBA00_11820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA00_11840 PF03707 Bacterial signalling protein N terminal repeat EBA00_11840 PF00990 Diguanylate cyclase, GGDEF domain EBA00_11840 PF00563 EAL domain EBA00_11845 PF07730 Histidine kinase EBA00_11845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_11850 PF00563 EAL domain EBA00_11850 PF00990 Diguanylate cyclase, GGDEF domain EBA00_11850 PF03707 Bacterial signalling protein N terminal repeat EBA00_11855 PF13426 PAS domain EBA00_11855 PF00989 PAS fold EBA00_11855 PF13188 PAS domain EBA00_11855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_11855 PF00512 His Kinase A (phospho-acceptor) domain EBA00_11875 PF00072 Response regulator receiver domain EBA00_11875 PF01584 CheW-like domain EBA00_11885 PF00460 Flagella basal body rod protein EBA00_11885 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EBA00_11890 PF03963 Flagellar hook capping protein - N-terminal region EBA00_11895 PF00460 Flagella basal body rod protein EBA00_11895 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EBA00_11895 PF07559 Flagellar basal body protein FlaE EBA00_11900 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EBA00_11900 PF00460 Flagella basal body rod protein EBA00_11910 PF00460 Flagella basal body rod protein EBA00_11910 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EBA00_11915 PF02107 Flagellar L-ring protein EBA00_11920 PF02119 Flagellar P-ring protein EBA00_11925 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EBA00_11925 PF10135 Rod binding protein EBA00_11930 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EBA00_11930 PF07196 Flagellin hook IN motif EBA00_11940 PF00669 Bacterial flagellin N-terminal helical region EBA00_11940 PF00700 Bacterial flagellin C-terminal helical region EBA00_11945 PF07196 Flagellin hook IN motif EBA00_11945 PF07195 Flagellar hook-associated protein 2 C-terminus EBA00_11945 PF02465 Flagellar hook-associated protein 2 N-terminus EBA00_11950 PF02561 Flagellar protein FliS EBA00_11965 PF00072 Response regulator receiver domain EBA00_11965 PF00196 Bacterial regulatory proteins, luxR family EBA00_11970 PF04552 Sigma-54, DNA binding domain EBA00_11970 PF04963 Sigma-54 factor, core binding domain EBA00_11970 PF00309 Sigma-54 factor, Activator interacting domain (AID) EBA00_11975 PF00072 Response regulator receiver domain EBA00_11975 PF01339 CheB methylesterase EBA00_11980 PF00158 Sigma-54 interaction domain EBA00_11980 PF00072 Response regulator receiver domain EBA00_11980 PF02954 Bacterial regulatory protein, Fis family EBA00_11985 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EBA00_11995 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EBA00_11995 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EBA00_12030 PF00535 Glycosyl transferase family 2 EBA00_12030 PF00534 Glycosyl transferases group 1 EBA00_12040 PF02049 Flagellar hook-basal body complex protein FliE EBA00_12045 PF08345 Flagellar M-ring protein C-terminal EBA00_12045 PF01514 Secretory protein of YscJ/FliF family EBA00_12050 PF01706 FliG C-terminal domain EBA00_12050 PF14841 FliG middle domain EBA00_12050 PF14842 FliG N-terminal domain EBA00_12060 PF18269 T3SS EscN ATPase C-terminal domain EBA00_12060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EBA00_12080 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EBA00_12080 PF02154 Flagellar motor switch protein FliM EBA00_12085 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EBA00_12090 PF04347 Flagellar biosynthesis protein, FliO EBA00_12095 PF00813 FliP family EBA00_12100 PF01313 Bacterial export proteins, family 3 EBA00_12105 PF01311 Bacterial export proteins, family 1 EBA00_12110 PF00563 EAL domain EBA00_12110 PF00990 Diguanylate cyclase, GGDEF domain EBA00_12110 PF03707 Bacterial signalling protein N terminal repeat EBA00_12110 PF13188 PAS domain EBA00_12115 PF13188 PAS domain EBA00_12115 PF00990 Diguanylate cyclase, GGDEF domain EBA00_12115 PF03707 Bacterial signalling protein N terminal repeat EBA00_12115 PF00563 EAL domain EBA00_12120 PF03707 Bacterial signalling protein N terminal repeat EBA00_12120 PF00990 Diguanylate cyclase, GGDEF domain EBA00_12120 PF00563 EAL domain EBA00_12125 PF01312 FlhB HrpN YscU SpaS Family EBA00_12130 PF00771 FHIPEP family EBA00_12135 PF00448 SRP54-type protein, GTPase domain EBA00_12140 PF10609 NUBPL iron-transfer P-loop NTPase EBA00_12145 PF04545 Sigma-70, region 4 EBA00_12145 PF04542 Sigma-70 region 2 EBA00_12145 PF04539 Sigma-70 region 3 EBA00_12150 PF00072 Response regulator receiver domain EBA00_12155 PF04344 Chemotaxis phosphatase, CheZ EBA00_12160 PF01584 CheW-like domain EBA00_12160 PF02895 Signal transducing histidine kinase, homodimeric domain EBA00_12160 PF07194 P2 response regulator binding domain EBA00_12160 PF01627 Hpt domain EBA00_12160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_12170 PF05598 Transposase domain (DUF772) EBA00_12180 PF05598 Transposase domain (DUF772) EBA00_12225 PF05598 Transposase domain (DUF772) EBA00_12225 PF01609 Transposase DDE domain EBA00_12230 PF06616 BsuBI/PstI restriction endonuclease domain EBA00_12230 PF17728 BsuBI/PstI restriction endonuclease HTH domain EBA00_12250 PF00593 TonB dependent receptor EBA00_12250 PF07715 TonB-dependent Receptor Plug Domain EBA00_12265 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EBA00_12265 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EBA00_12285 PF01618 MotA/TolQ/ExbB proton channel family EBA00_12290 PF00691 OmpA family EBA00_12290 PF13677 Membrane MotB of proton-channel complex MotA/MotB EBA00_12295 PF13614 AAA domain EBA00_12300 PF01584 CheW-like domain EBA00_12310 PF00072 Response regulator receiver domain EBA00_12315 PF01627 Hpt domain EBA00_12315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_12315 PF01584 CheW-like domain EBA00_12315 PF09078 CheY binding EBA00_12315 PF02895 Signal transducing histidine kinase, homodimeric domain EBA00_12330 PF13936 Helix-turn-helix domain EBA00_12330 PF00665 Integrase core domain EBA00_12335 PF02203 Tar ligand binding domain homologue EBA00_12335 PF00672 HAMP domain EBA00_12335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA00_12345 PF17200 Single Cache domain 2 EBA00_12345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA00_12345 PF00672 HAMP domain EBA00_12370 PF02203 Tar ligand binding domain homologue EBA00_12370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA00_12370 PF00672 HAMP domain EBA00_12375 PF02203 Tar ligand binding domain homologue EBA00_12375 PF00672 HAMP domain EBA00_12375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA00_12380 PF05598 Transposase domain (DUF772) EBA00_12385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA00_12385 PF02203 Tar ligand binding domain homologue EBA00_12385 PF00672 HAMP domain EBA00_12400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA00_12400 PF00672 HAMP domain EBA00_12400 PF02203 Tar ligand binding domain homologue EBA00_12405 PF00672 HAMP domain EBA00_12405 PF02203 Tar ligand binding domain homologue EBA00_12405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA00_12410 PF02203 Tar ligand binding domain homologue EBA00_12410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA00_12410 PF00672 HAMP domain EBA00_12420 PF07238 PilZ domain EBA00_12420 PF07317 Flagellar regulator YcgR EBA00_12425 PF01584 CheW-like domain EBA00_12435 PF00672 HAMP domain EBA00_12435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA00_12435 PF02203 Tar ligand binding domain homologue EBA00_12440 PF01739 CheR methyltransferase, SAM binding domain EBA00_12440 PF03705 CheR methyltransferase, all-alpha domain EBA00_12445 PF03975 CheD chemotactic sensory transduction EBA00_12450 PF00072 Response regulator receiver domain EBA00_12450 PF01339 CheB methylesterase EBA00_12455 PF00990 Diguanylate cyclase, GGDEF domain EBA00_12455 PF03707 Bacterial signalling protein N terminal repeat EBA00_12455 PF00563 EAL domain EBA00_12465 PF00561 alpha/beta hydrolase fold EBA00_12470 PF00330 Aconitase family (aconitate hydratase) EBA00_12470 PF06434 Aconitate hydratase 2 N-terminus EBA00_12470 PF11791 Aconitate B N-terminal domain EBA00_12485 PF00694 Aconitase C-terminal domain EBA00_12485 PF00330 Aconitase family (aconitate hydratase) EBA00_12495 PF00501 AMP-binding enzyme EBA00_12495 PF13193 AMP-binding enzyme C-terminal domain EBA00_12500 PF00378 Enoyl-CoA hydratase/isomerase EBA00_12505 PF00072 Response regulator receiver domain EBA00_12505 PF01627 Hpt domain EBA00_12505 PF00512 His Kinase A (phospho-acceptor) domain EBA00_12505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_12515 PF00072 Response regulator receiver domain EBA00_12520 PF01336 OB-fold nucleic acid binding domain EBA00_12520 PF00152 tRNA synthetases class II (D, K and N) EBA00_12530 PF00072 Response regulator receiver domain EBA00_12530 PF04397 LytTr DNA-binding domain EBA00_12545 PF02272 DHHA1 domain EBA00_12545 PF17768 RecJ OB domain EBA00_12545 PF01368 DHH family EBA00_12555 PF01272 Transcription elongation factor, GreA/GreB, C-term EBA00_12555 PF03449 Transcription elongation factor, N-terminal EBA00_12560 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EBA00_12560 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EBA00_12560 PF02142 MGS-like domain EBA00_12570 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EBA00_12570 PF00117 Glutamine amidotransferase class-I EBA00_12575 PF05173 Dihydrodipicolinate reductase, C-terminus EBA00_12575 PF01113 Dihydrodipicolinate reductase, N-terminus EBA00_12580 PF03473 MOSC domain EBA00_12580 PF03475 3-alpha domain EBA00_12585 PF00155 Aminotransferase class I and II EBA00_12605 PF07664 Ferrous iron transport protein B C terminus EBA00_12605 PF07670 Nucleoside recognition EBA00_12605 PF02421 Ferrous iron transport protein B EBA00_12615 PF00378 Enoyl-CoA hydratase/isomerase EBA00_12625 PF00682 HMGL-like EBA00_12630 PF00106 short chain dehydrogenase EBA00_12635 PF01132 Elongation factor P (EF-P) OB domain EBA00_12635 PF08207 Elongation factor P (EF-P) KOW-like domain EBA00_12635 PF09285 Elongation factor P, C-terminal EBA00_12660 PF01565 FAD binding domain EBA00_12660 PF02913 FAD linked oxidases, C-terminal domain EBA00_12665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EBA00_12665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EBA00_12675 PF13520 Amino acid permease EBA00_12680 PF13520 Amino acid permease EBA00_12685 PF00596 Class II Aldolase and Adducin N-terminal domain EBA00_12690 PF03079 ARD/ARD' family EBA00_12715 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase EBA00_12715 PF01502 Phosphoribosyl-AMP cyclohydrolase EBA00_12720 PF00977 Histidine biosynthesis protein EBA00_12725 PF00977 Histidine biosynthesis protein EBA00_12730 PF00117 Glutamine amidotransferase class-I EBA00_12735 PF00475 Imidazoleglycerol-phosphate dehydratase EBA00_12740 PF00155 Aminotransferase class I and II EBA00_12745 PF00815 Histidinol dehydrogenase EBA00_12750 PF01634 ATP phosphoribosyltransferase EBA00_12750 PF08029 HisG, C-terminal domain EBA00_12770 PF13393 Histidyl-tRNA synthetase EBA00_12770 PF03129 Anticodon binding domain EBA00_12785 PF14821 Threonine synthase N terminus EBA00_12785 PF00291 Pyridoxal-phosphate dependent enzyme EBA00_12800 PF07519 Tannase and feruloyl esterase EBA00_12805 PF08544 GHMP kinases C terminal EBA00_12805 PF00288 GHMP kinases N terminal domain EBA00_12810 PF00742 Homoserine dehydrogenase EBA00_12810 PF01842 ACT domain EBA00_12810 PF03447 Homoserine dehydrogenase, NAD binding domain EBA00_12810 PF13840 ACT domain EBA00_12810 PF00696 Amino acid kinase family EBA00_12850 PF00171 Aldehyde dehydrogenase family EBA00_12870 PF01180 Dihydroorotate dehydrogenase EBA00_12875 PF01565 FAD binding domain EBA00_12875 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EBA00_12880 PF00892 EamA-like transporter family EBA00_12890 PF01177 Asp/Glu/Hydantoin racemase EBA00_12900 PF07690 Major Facilitator Superfamily EBA00_12910 PF01569 PAP2 superfamily EBA00_12915 PF04551 GcpE protein EBA00_12925 PF00072 Response regulator receiver domain EBA00_12935 PF00150 Cellulase (glycosyl hydrolase family 5) EBA00_12935 PF02013 Cellulose or protein binding domain EBA00_12945 PF00990 Diguanylate cyclase, GGDEF domain EBA00_12945 PF00360 Phytochrome region EBA00_12945 PF01590 GAF domain EBA00_12945 PF00563 EAL domain EBA00_12955 PF00474 Sodium:solute symporter family EBA00_12965 PF14310 Fibronectin type III-like domain EBA00_12965 PF00933 Glycosyl hydrolase family 3 N terminal domain EBA00_12965 PF01915 Glycosyl hydrolase family 3 C-terminal domain EBA00_12990 PF00342 Phosphoglucose isomerase EBA00_12995 PF02261 Aspartate decarboxylase EBA00_13000 PF02569 Pantoate-beta-alanine ligase EBA00_13005 PF02548 Ketopantoate hydroxymethyltransferase EBA00_13010 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EBA00_13015 PF01743 Poly A polymerase head domain EBA00_13015 PF12626 Polymerase A arginine-rich C-terminus EBA00_13015 PF12627 Probable RNA and SrmB- binding site of polymerase A EBA00_13025 PF02649 Type I GTP cyclohydrolase folE2 EBA00_13030 PF01520 N-acetylmuramoyl-L-alanine amidase EBA00_13050 PF00083 Sugar (and other) transporter EBA00_13060 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EBA00_13060 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EBA00_13080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA00_13080 PF03466 LysR substrate binding domain EBA00_13085 PF01081 KDPG and KHG aldolase EBA00_13090 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EBA00_13090 PF13378 Enolase C-terminal domain-like EBA00_13095 PF08450 SMP-30/Gluconolactonase/LRE-like region EBA00_13100 PF05035 2-keto-3-deoxy-galactonokinase EBA00_13105 PF00037 4Fe-4S binding domain EBA00_13105 PF11953 Domain of unknown function (DUF3470) EBA00_13115 PF00701 Dihydrodipicolinate synthetase family EBA00_13130 PF00578 AhpC/TSA family EBA00_13135 PF02562 PhoH-like protein EBA00_13135 PF13638 PIN domain EBA00_13145 PF02581 Thiamine monophosphate synthase EBA00_13145 PF08543 Phosphomethylpyrimidine kinase EBA00_13170 PF03466 LysR substrate binding domain EBA00_13170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA00_13175 PF17954 Quercetinase C-terminal cupin domain EBA00_13175 PF02678 Pirin EBA00_13230 PF02599 Global regulator protein family EBA00_13235 PF01411 tRNA synthetases class II (A) EBA00_13235 PF02272 DHHA1 domain EBA00_13235 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EBA00_13240 PF02631 RecX family EBA00_13250 PF00154 recA bacterial DNA recombination protein EBA00_13260 PF03109 ABC1 family EBA00_13265 PF02464 Competence-damaged protein EBA00_13270 PF01926 50S ribosome-binding GTPase EBA00_13270 PF13167 GTP-binding GTPase N-terminal EBA00_13270 PF16360 GTP-binding GTPase Middle Region EBA00_13275 PF17209 Hfq protein EBA00_13285 PF00809 Pterin binding enzyme EBA00_13290 PF00004 ATPase family associated with various cellular activities (AAA) EBA00_13290 PF06480 FtsH Extracellular EBA00_13290 PF17862 AAA+ lid domain EBA00_13290 PF01434 Peptidase family M41 EBA00_13295 PF01728 FtsJ-like methyltransferase EBA00_13300 PF01985 CRS1 / YhbY (CRM) domain EBA00_13310 PF01476 LysM domain EBA00_13310 PF01551 Peptidase family M23 EBA00_13315 PF09335 SNARE associated Golgi protein EBA00_13325 PF01975 Survival protein SurE EBA00_13330 PF01713 Smr domain EBA00_13335 PF01142 tRNA pseudouridine synthase D (TruD) EBA00_13340 PF02542 YgbB family EBA00_13350 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EBA00_13355 PF04977 Septum formation initiator EBA00_13360 PF03952 Enolase, N-terminal domain EBA00_13360 PF00113 Enolase, C-terminal TIM barrel domain EBA00_13365 PF00793 DAHP synthetase I family EBA00_13370 PF06418 CTP synthase N-terminus EBA00_13370 PF00117 Glutamine amidotransferase class-I EBA00_13380 PF00204 DNA gyrase B EBA00_13380 PF00986 DNA gyrase B subunit, carboxyl terminus EBA00_13380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_13380 PF01751 Toprim domain EBA00_13400 PF01384 Phosphate transporter family EBA00_13415 PF01595 Cyclin M transmembrane N-terminal domain EBA00_13415 PF00571 CBS domain EBA00_13415 PF03471 Transporter associated domain EBA00_13430 PF00296 Luciferase-like monooxygenase EBA00_13450 PF07690 Major Facilitator Superfamily EBA00_13460 PF00664 ABC transporter transmembrane region EBA00_13460 PF00005 ABC transporter EBA00_13465 PF06745 KaiC EBA00_13480 PF00534 Glycosyl transferases group 1 EBA00_13480 PF13579 Glycosyl transferase 4-like domain EBA00_13515 PF00535 Glycosyl transferase family 2 EBA00_13520 PF01943 Polysaccharide biosynthesis protein EBA00_13525 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EBA00_13545 PF05523 WxcM-like, C-terminal EBA00_13560 PF00034 Cytochrome c EBA00_13570 PF04542 Sigma-70 region 2 EBA00_13570 PF08281 Sigma-70, region 4 EBA00_13580 PF00082 Subtilase family EBA00_13585 PF01578 Cytochrome C assembly protein EBA00_13590 PF04995 Heme exporter protein D (CcmD) EBA00_13595 PF03100 CcmE EBA00_13600 PF01578 Cytochrome C assembly protein EBA00_13600 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal EBA00_13605 PF08534 Redoxin EBA00_13610 PF03918 Cytochrome C biogenesis protein EBA00_13620 PF00072 Response regulator receiver domain EBA00_13620 PF13426 PAS domain EBA00_13620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_13625 PF06745 KaiC EBA00_13630 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EBA00_13630 PF00072 Response regulator receiver domain EBA00_13630 PF01627 Hpt domain EBA00_13630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_13630 PF00672 HAMP domain EBA00_13630 PF00512 His Kinase A (phospho-acceptor) domain EBA00_13650 PF02203 Tar ligand binding domain homologue EBA00_13650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA00_13650 PF00672 HAMP domain EBA00_13670 PF03377 TAL effector repeat EBA00_13690 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin EBA00_13705 PF03466 LysR substrate binding domain EBA00_13705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA00_13710 PF02525 Flavodoxin-like fold EBA00_13720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EBA00_13720 PF02403 Seryl-tRNA synthetase N-terminal domain EBA00_13725 PF03544 Gram-negative bacterial TonB protein C-terminal EBA00_13730 PF05598 Transposase domain (DUF772) EBA00_13730 PF01609 Transposase DDE domain EBA00_13755 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EBA00_13760 PF01842 ACT domain EBA00_13760 PF00800 Prephenate dehydratase EBA00_13760 PF01817 Chorismate mutase type II EBA00_13765 PF00266 Aminotransferase class-V EBA00_13770 PF00174 Oxidoreductase molybdopterin binding domain EBA00_13780 PF01794 Ferric reductase like transmembrane component EBA00_13805 PF00392 Bacterial regulatory proteins, gntR family EBA00_13805 PF07702 UTRA domain EBA00_13815 PF07969 Amidohydrolase family EBA00_13820 PF00221 Aromatic amino acid lyase EBA00_13830 PF01175 Urocanase Rossmann-like domain EBA00_13830 PF17392 Urocanase C-terminal domain EBA00_13830 PF17391 Urocanase N-terminal domain EBA00_13860 PF04851 Type III restriction enzyme, res subunit EBA00_13860 PF02151 UvrB/uvrC motif EBA00_13860 PF00271 Helicase conserved C-terminal domain EBA00_13860 PF12344 Ultra-violet resistance protein B EBA00_13860 PF17757 UvrB interaction domain EBA00_13865 PF07963 Prokaryotic N-terminal methylation motif EBA00_13865 PF00114 Pilin (bacterial filament) EBA00_13880 PF05567 Neisseria PilC beta-propeller domain EBA00_13910 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases EBA00_13910 PF03641 Possible lysine decarboxylase EBA00_13910 PF11892 Domain of unknown function (DUF3412) EBA00_13915 PF05598 Transposase domain (DUF772) EBA00_13915 PF01609 Transposase DDE domain EBA00_13920 PF00593 TonB dependent receptor EBA00_13930 PF01914 MarC family integral membrane protein EBA00_13940 PF00462 Glutaredoxin EBA00_13945 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EBA00_13945 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EBA00_13950 PF02222 ATP-grasp domain EBA00_13950 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain EBA00_13955 PF00731 AIR carboxylase EBA00_13965 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain EBA00_13965 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain EBA00_13975 PF00575 S1 RNA binding domain EBA00_13975 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain EBA00_13975 PF01138 3' exoribonuclease family, domain 1 EBA00_13975 PF03725 3' exoribonuclease family, domain 2 EBA00_13975 PF00013 KH domain EBA00_13980 PF00312 Ribosomal protein S15 EBA00_13985 PF09157 Pseudouridine synthase II TruB, C-terminal EBA00_13985 PF16198 tRNA pseudouridylate synthase B C-terminal domain EBA00_13985 PF01509 TruB family pseudouridylate synthase (N terminal domain) EBA00_13990 PF02033 Ribosome-binding factor A EBA00_13995 PF04760 Translation initiation factor IF-2, N-terminal region EBA00_13995 PF00009 Elongation factor Tu GTP binding domain EBA00_13995 PF08364 Bacterial translation initiation factor IF-2 associated region EBA00_13995 PF11987 Translation-initiation factor 2 EBA00_14000 PF00575 S1 RNA binding domain EBA00_14000 PF08529 NusA N-terminal domain EBA00_14000 PF13184 NusA-like KH domain EBA00_14005 PF17384 RimP C-terminal SH3 domain EBA00_14005 PF02576 RimP N-terminal domain EBA00_14015 PF00361 Proton-conducting membrane transporter EBA00_14020 PF00361 Proton-conducting membrane transporter EBA00_14020 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus EBA00_14025 PF00361 Proton-conducting membrane transporter EBA00_14025 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EBA00_14030 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EBA00_14035 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 EBA00_14040 PF12838 4Fe-4S dicluster domain EBA00_14045 PF00146 NADH dehydrogenase EBA00_14050 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal EBA00_14050 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region EBA00_14050 PF00384 Molybdopterin oxidoreductase EBA00_14055 PF10531 SLBB domain EBA00_14055 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region EBA00_14055 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EBA00_14065 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit EBA00_14070 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit EBA00_14075 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EBA00_14080 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 EBA00_14095 PF00121 Triosephosphate isomerase EBA00_14135 PF00563 EAL domain EBA00_14135 PF03707 Bacterial signalling protein N terminal repeat EBA00_14135 PF00990 Diguanylate cyclase, GGDEF domain EBA00_14150 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EBA00_14150 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EBA00_14150 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EBA00_14150 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EBA00_14155 PF01039 Carboxyl transferase domain EBA00_14155 PF17848 Acetyl-coA carboxylase zinc finger domain EBA00_14165 PF00290 Tryptophan synthase alpha chain EBA00_14175 PF00291 Pyridoxal-phosphate dependent enzyme EBA00_14180 PF03466 LysR substrate binding domain EBA00_14180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA00_14185 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase EBA00_14190 PF01416 tRNA pseudouridine synthase EBA00_14210 PF01118 Semialdehyde dehydrogenase, NAD binding domain EBA00_14210 PF02774 Semialdehyde dehydrogenase, dimerisation domain EBA00_14215 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EBA00_14215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EBA00_14220 PF01264 Chorismate synthase EBA00_14225 PF05175 Methyltransferase small domain EBA00_14230 PF02630 SCO1/SenC EBA00_14235 PF02666 Phosphatidylserine decarboxylase EBA00_14255 PF05872 Bacterial protein of unknown function (DUF853) EBA00_14265 PF00665 Integrase core domain EBA00_14265 PF13936 Helix-turn-helix domain EBA00_14280 PF03449 Transcription elongation factor, N-terminal EBA00_14280 PF01272 Transcription elongation factor, GreA/GreB, C-term EBA00_14290 PF01609 Transposase DDE domain EBA00_14290 PF05598 Transposase domain (DUF772) EBA00_14300 PF00919 Uncharacterized protein family UPF0004 EBA00_14300 PF04055 Radical SAM superfamily EBA00_14300 PF18693 TRAM domain EBA00_14305 PF01738 Dienelactone hydrolase family EBA00_14320 PF05598 Transposase domain (DUF772) EBA00_14320 PF01609 Transposase DDE domain EBA00_14335 PF00692 dUTPase EBA00_14345 PF10609 NUBPL iron-transfer P-loop NTPase EBA00_14360 PF05598 Transposase domain (DUF772) EBA00_14360 PF01609 Transposase DDE domain EBA00_14365 PF05598 Transposase domain (DUF772) EBA00_14370 PF00665 Integrase core domain EBA00_14370 PF13936 Helix-turn-helix domain EBA00_14395 PF00665 Integrase core domain EBA00_14395 PF13936 Helix-turn-helix domain EBA00_14405 PF01609 Transposase DDE domain EBA00_14405 PF05598 Transposase domain (DUF772) EBA00_14430 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA00_14430 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EBA00_14435 PF01266 FAD dependent oxidoreductase EBA00_14440 PF04235 Protein of unknown function (DUF418) EBA00_14445 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EBA00_14450 PF00877 NlpC/P60 family EBA00_14455 PF00877 NlpC/P60 family EBA00_14470 PF00375 Sodium:dicarboxylate symporter family EBA00_14475 PF00245 Alkaline phosphatase EBA00_14480 PF01171 PP-loop family EBA00_14480 PF09179 TilS substrate binding domain EBA00_14480 PF11734 TilS substrate C-terminal domain EBA00_14485 PF02609 Exonuclease VII small subunit EBA00_14490 PF00348 Polyprenyl synthetase EBA00_14500 PF14521 Lysine-specific metallo-endopeptidase EBA00_14515 PF01523 Putative modulator of DNA gyrase EBA00_14520 PF04751 Protein of unknown function (DUF615) EBA00_14525 PF01523 Putative modulator of DNA gyrase EBA00_14535 PF13116 Protein of unknown function EBA00_14535 PF13502 AsmA-like C-terminal region EBA00_14540 PF10150 Ribonuclease E/G family EBA00_14540 PF00575 S1 RNA binding domain EBA00_14545 PF02545 Maf-like protein EBA00_14550 PF04402 Protein of unknown function (DUF541) EBA00_14565 PF03544 Gram-negative bacterial TonB protein C-terminal EBA00_14575 PF02590 Predicted SPOUT methyltransferase EBA00_14595 PF01467 Cytidylyltransferase-like EBA00_14615 PF08264 Anticodon-binding domain of tRNA EBA00_14615 PF13603 Leucyl-tRNA synthetase, Domain 2 EBA00_14615 PF00133 tRNA synthetases class I (I, L, M and V) EBA00_14625 PF00085 Thioredoxin EBA00_14665 PF01609 Transposase DDE domain EBA00_14665 PF05598 Transposase domain (DUF772) EBA00_14690 PF00005 ABC transporter EBA00_14690 PF00664 ABC transporter transmembrane region EBA00_14700 PF00873 AcrB/AcrD/AcrF family EBA00_14715 PF02321 Outer membrane efflux protein EBA00_14720 PF00072 Response regulator receiver domain EBA00_14720 PF00486 Transcriptional regulatory protein, C terminal EBA00_14725 PF00512 His Kinase A (phospho-acceptor) domain EBA00_14725 PF00672 HAMP domain EBA00_14725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_14730 PF00999 Sodium/hydrogen exchanger family EBA00_14735 PF00144 Beta-lactamase EBA00_14740 PF03737 Aldolase/RraA EBA00_14760 PF00849 RNA pseudouridylate synthase EBA00_14760 PF01479 S4 domain EBA00_14765 PF00990 Diguanylate cyclase, GGDEF domain EBA00_14765 PF08448 PAS fold EBA00_14765 PF00563 EAL domain EBA00_14770 PF00270 DEAD/DEAH box helicase EBA00_14770 PF03880 DbpA RNA binding domain EBA00_14770 PF00271 Helicase conserved C-terminal domain EBA00_14775 PF04542 Sigma-70 region 2 EBA00_14775 PF04539 Sigma-70 region 3 EBA00_14775 PF04545 Sigma-70, region 4 EBA00_14820 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EBA00_14820 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EBA00_14825 PF01609 Transposase DDE domain EBA00_14825 PF05598 Transposase domain (DUF772) EBA00_14835 PF00654 Voltage gated chloride channel EBA00_14840 PF00107 Zinc-binding dehydrogenase EBA00_14840 PF08240 Alcohol dehydrogenase GroES-like domain EBA00_14910 PF05598 Transposase domain (DUF772) EBA00_14915 PF13936 Helix-turn-helix domain EBA00_14915 PF00665 Integrase core domain EBA00_14945 PF01475 Ferric uptake regulator family EBA00_14950 PF00749 tRNA synthetases class I (E and Q), catalytic domain EBA00_14960 PF00795 Carbon-nitrogen hydrolase EBA00_14985 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ EBA00_14995 PF00271 Helicase conserved C-terminal domain EBA00_14995 PF17757 UvrB interaction domain EBA00_14995 PF03461 TRCF domain EBA00_14995 PF00270 DEAD/DEAH box helicase EBA00_14995 PF02559 CarD-like/TRCF domain EBA00_15005 PF02895 Signal transducing histidine kinase, homodimeric domain EBA00_15005 PF01584 CheW-like domain EBA00_15005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_15005 PF01627 Hpt domain EBA00_15005 PF09078 CheY binding EBA00_15015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA00_15015 PF02203 Tar ligand binding domain homologue EBA00_15015 PF00672 HAMP domain EBA00_15020 PF01584 CheW-like domain EBA00_15025 PF13426 PAS domain EBA00_15025 PF00990 Diguanylate cyclase, GGDEF domain EBA00_15025 PF00563 EAL domain EBA00_15030 PF01739 CheR methyltransferase, SAM binding domain EBA00_15030 PF03705 CheR methyltransferase, all-alpha domain EBA00_15035 PF00072 Response regulator receiver domain EBA00_15035 PF01339 CheB methylesterase EBA00_15045 PF00300 Histidine phosphatase superfamily (branch 1) EBA00_15050 PF04493 Endonuclease V EBA00_15095 PF05598 Transposase domain (DUF772) EBA00_15135 PF04717 Type VI secretion system, phage-baseplate injector EBA00_15145 PF05726 Pirin C-terminal cupin domain EBA00_15145 PF02678 Pirin EBA00_15150 PF02554 Carbon starvation protein CstA EBA00_15150 PF13722 5TM C-terminal transporter carbon starvation CstA EBA00_15155 PF04328 Selenoprotein, putative EBA00_15195 PF09277 Erythronolide synthase, docking EBA00_15195 PF08990 Erythronolide synthase docking EBA00_15195 PF08240 Alcohol dehydrogenase GroES-like domain EBA00_15195 PF00698 Acyl transferase domain EBA00_15195 PF16197 Ketoacyl-synthetase C-terminal extension EBA00_15195 PF00109 Beta-ketoacyl synthase, N-terminal domain EBA00_15195 PF14765 Polyketide synthase dehydratase EBA00_15195 PF08659 KR domain EBA00_15195 PF00550 Phosphopantetheine attachment site EBA00_15195 PF02801 Beta-ketoacyl synthase, C-terminal domain EBA00_15200 PF00563 EAL domain EBA00_15200 PF01590 GAF domain EBA00_15200 PF00360 Phytochrome region EBA00_15200 PF00990 Diguanylate cyclase, GGDEF domain EBA00_15205 PF00436 Single-strand binding protein family EBA00_15210 PF00348 Polyprenyl synthetase EBA00_15220 PF05598 Transposase domain (DUF772) EBA00_15220 PF01609 Transposase DDE domain EBA00_15235 PF08245 Mur ligase middle domain EBA00_15250 PF00696 Amino acid kinase family EBA00_15250 PF01842 ACT domain EBA00_15260 PF02567 Phenazine biosynthesis-like protein EBA00_15270 PF02566 OsmC-like protein EBA00_15280 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EBA00_15280 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EBA00_15285 PF03652 Holliday junction resolvase EBA00_15290 PF02622 Uncharacterized ACR, COG1678 EBA00_15305 PF13673 Acetyltransferase (GNAT) domain EBA00_15305 PF03352 Methyladenine glycosylase EBA00_15305 PF00958 GMP synthase C terminal domain EBA00_15305 PF00117 Glutamine amidotransferase class-I EBA00_15305 PF13302 Acetyltransferase (GNAT) domain EBA00_15325 PF00437 Type II/IV secretion system protein EBA00_15330 PF00437 Type II/IV secretion system protein EBA00_15340 PF01168 Alanine racemase, N-terminal domain EBA00_15345 PF03807 NADP oxidoreductase coenzyme F420-dependent EBA00_15345 PF14748 Pyrroline-5-carboxylate reductase dimerisation EBA00_15395 PF02082 Transcriptional regulator EBA00_15400 PF01458 Uncharacterized protein family (UPF0051) EBA00_15405 PF00005 ABC transporter EBA00_15410 PF01458 Uncharacterized protein family (UPF0051) EBA00_15415 PF00266 Aminotransferase class-V EBA00_15425 PF00355 Rieske [2Fe-2S] domain EBA00_15435 PF05598 Transposase domain (DUF772) EBA00_15435 PF01609 Transposase DDE domain EBA00_15460 PF07687 Peptidase dimerisation domain EBA00_15460 PF01546 Peptidase family M20/M25/M40 EBA00_15470 PF01636 Phosphotransferase enzyme family EBA00_15475 PF00483 Nucleotidyl transferase EBA00_15480 PF00308 Bacterial dnaA protein EBA00_15485 PF01594 AI-2E family transporter EBA00_15495 PF02769 AIR synthase related protein, C-terminal domain EBA00_15495 PF00586 AIR synthase related protein, N-terminal domain EBA00_15510 PF00551 Formyl transferase EBA00_15535 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EBA00_15540 PF01722 BolA-like protein EBA00_15545 PF01380 SIS domain EBA00_15545 PF00571 CBS domain EBA00_15560 PF03968 OstA-like protein EBA00_15565 PF00005 ABC transporter EBA00_15570 PF00309 Sigma-54 factor, Activator interacting domain (AID) EBA00_15570 PF04552 Sigma-54, DNA binding domain EBA00_15570 PF04963 Sigma-54 factor, core binding domain EBA00_15575 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EBA00_15580 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EBA00_15585 PF07475 HPr Serine kinase C-terminal domain EBA00_15585 PF02603 HPr Serine kinase N terminus EBA00_15590 PF03668 P-loop ATPase protein family EBA00_15605 PF01609 Transposase DDE domain EBA00_15605 PF05598 Transposase domain (DUF772) EBA00_15620 PF00381 PTS HPr component phosphorylation site EBA00_15625 PF00391 PEP-utilising enzyme, mobile domain EBA00_15625 PF02896 PEP-utilising enzyme, TIM barrel domain EBA00_15625 PF05524 PEP-utilising enzyme, N-terminal EBA00_15635 PF00571 CBS domain EBA00_15635 PF01769 Divalent cation transporter EBA00_15635 PF03448 MgtE intracellular N domain EBA00_15640 PF00756 Putative esterase EBA00_15645 PF02322 Cytochrome bd terminal oxidase subunit II EBA00_15655 PF01609 Transposase DDE domain EBA00_15655 PF05598 Transposase domain (DUF772) EBA00_15660 PF00145 C-5 cytosine-specific DNA methylase EBA00_15685 PF00324 Amino acid permease EBA00_15695 PF00561 alpha/beta hydrolase fold EBA00_15700 PF00196 Bacterial regulatory proteins, luxR family EBA00_15705 PF00324 Amino acid permease EBA00_15720 PF05598 Transposase domain (DUF772) EBA00_15730 PF12706 Beta-lactamase superfamily domain EBA00_15785 PF03738 Glutathionylspermidine synthase preATP-grasp EBA00_15810 PF04012 PspA/IM30 family EBA00_15820 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region EBA00_15820 PF01243 Pyridoxamine 5'-phosphate oxidase EBA00_15825 PF01202 Shikimate kinase EBA00_15830 PF01761 3-dehydroquinate synthase EBA00_15840 PF01208 Uroporphyrinogen decarboxylase (URO-D) EBA00_15855 PF05598 Transposase domain (DUF772) EBA00_15880 PF16671 Actin cross-linking domain EBA00_15880 PF04717 Type VI secretion system, phage-baseplate injector EBA00_15890 PF10431 C-terminal, D2-small domain, of ClpB protein EBA00_15890 PF00004 ATPase family associated with various cellular activities (AAA) EBA00_15890 PF17871 AAA lid domain EBA00_15890 PF07724 AAA domain (Cdc48 subfamily) EBA00_15970 PF05598 Transposase domain (DUF772) EBA00_15995 PF05598 Transposase domain (DUF772) EBA00_16005 PF01609 Transposase DDE domain EBA00_16005 PF05598 Transposase domain (DUF772) EBA00_16015 PF05598 Transposase domain (DUF772) EBA00_16020 PF05598 Transposase domain (DUF772) EBA00_16030 PF13936 Helix-turn-helix domain EBA00_16030 PF00665 Integrase core domain EBA00_16040 PF04717 Type VI secretion system, phage-baseplate injector EBA00_16060 PF04972 BON domain EBA00_16060 PF00691 OmpA family EBA00_16105 PF02222 ATP-grasp domain EBA00_16130 PF00730 HhH-GPD superfamily base excision DNA repair protein EBA00_16145 PF00196 Bacterial regulatory proteins, luxR family EBA00_16145 PF00072 Response regulator receiver domain EBA00_16150 PF07730 Histidine kinase EBA00_16160 PF05209 Septum formation inhibitor MinC, N-terminal domain EBA00_16160 PF03775 Septum formation inhibitor MinC, C-terminal domain EBA00_16165 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EBA00_16170 PF03776 Septum formation topological specificity factor MinE EBA00_16180 PF00512 His Kinase A (phospho-acceptor) domain EBA00_16180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_16180 PF08521 Two-component sensor kinase N-terminal EBA00_16185 PF00486 Transcriptional regulatory protein, C terminal EBA00_16185 PF00072 Response regulator receiver domain EBA00_16190 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase EBA00_16200 PF00884 Sulfatase EBA00_16200 PF08019 Phosphoethanolamine transferase EptA/EptB EBA00_16240 PF02347 Glycine cleavage system P-protein EBA00_16270 PF00199 Catalase EBA00_16270 PF06628 Catalase-related immune-responsive EBA00_16270 PF18011 C-terminal domain found in long catalases EBA00_16315 PF02311 AraC-like ligand binding domain EBA00_16315 PF12833 Helix-turn-helix domain EBA00_16325 PF07676 WD40-like Beta Propeller Repeat EBA00_16325 PF00326 Prolyl oligopeptidase family EBA00_16325 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region EBA00_16340 PF03169 OPT oligopeptide transporter protein EBA00_16360 PF14579 Helix-hairpin-helix motif EBA00_16360 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EBA00_16360 PF02811 PHP domain EBA00_16360 PF07733 Bacterial DNA polymerase III alpha NTPase domain EBA00_16375 PF00717 Peptidase S24-like EBA00_16375 PF01726 LexA DNA binding domain EBA00_16405 PF13456 Reverse transcriptase-like EBA00_16405 PF00300 Histidine phosphatase superfamily (branch 1) EBA00_16445 PF04851 Type III restriction enzyme, res subunit EBA00_16445 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EBA00_16445 PF00271 Helicase conserved C-terminal domain EBA00_16445 PF08463 EcoEI R protein C-terminal EBA00_16455 PF02384 N-6 DNA Methylase EBA00_16460 PF01420 Type I restriction modification DNA specificity domain EBA00_16475 PF11838 ERAP1-like C-terminal domain EBA00_16475 PF01433 Peptidase family M1 domain EBA00_16480 PF00709 Adenylosuccinate synthetase EBA00_16490 PF01145 SPFH domain / Band 7 family EBA00_16495 PF12221 Bacterial membrane protein N terminal EBA00_16495 PF01145 SPFH domain / Band 7 family EBA00_16505 PF00072 Response regulator receiver domain EBA00_16510 PF00226 DnaJ domain EBA00_16510 PF01556 DnaJ C terminal domain EBA00_16560 PF07715 TonB-dependent Receptor Plug Domain EBA00_16560 PF00593 TonB dependent receptor EBA00_16565 PF04303 PrpF protein EBA00_16570 PF05598 Transposase domain (DUF772) EBA00_16570 PF01609 Transposase DDE domain EBA00_16590 PF00330 Aconitase family (aconitate hydratase) EBA00_16590 PF00694 Aconitase C-terminal domain EBA00_16595 PF00285 Citrate synthase, C-terminal domain EBA00_16605 PF00158 Sigma-54 interaction domain EBA00_16605 PF06506 Propionate catabolism activator EBA00_16605 PF02954 Bacterial regulatory protein, Fis family EBA00_16620 PF05598 Transposase domain (DUF772) EBA00_16635 PF09115 DNA polymerase III, delta subunit, C terminal EBA00_16640 PF02618 YceG-like family EBA00_16645 PF00425 chorismate binding enzyme EBA00_16645 PF04715 Anthranilate synthase component I, N terminal region EBA00_16650 PF00109 Beta-ketoacyl synthase, N-terminal domain EBA00_16650 PF02801 Beta-ketoacyl synthase, C-terminal domain EBA00_16655 PF00550 Phosphopantetheine attachment site EBA00_16665 PF00698 Acyl transferase domain EBA00_16675 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EBA00_16675 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EBA00_16680 PF01783 Ribosomal L32p protein family EBA00_16685 PF02620 Large ribosomal RNA subunit accumulation protein YceD EBA00_16690 PF02545 Maf-like protein EBA00_16705 PF17863 AAA lid domain EBA00_16705 PF07726 ATPase family associated with various cellular activities (AAA) EBA00_16715 PF13559 Domain of unknown function (DUF4129) EBA00_16715 PF01841 Transglutaminase-like superfamily EBA00_16715 PF11992 Domain of unknown function (DUF3488) EBA00_16725 PF01230 HIT domain EBA00_16730 PF13662 Toprim domain EBA00_16730 PF02132 RecR protein EBA00_16735 PF02575 YbaB/EbfC DNA-binding family EBA00_16740 PF12170 DNA polymerase III tau subunit V interacting with alpha EBA00_16740 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding EBA00_16740 PF12169 DNA polymerase III subunits gamma and tau domain III EBA00_16770 PF02391 MoaE protein EBA00_16775 PF02597 ThiS family EBA00_16780 PF01967 MoaC family EBA00_16790 PF04055 Radical SAM superfamily EBA00_16790 PF06463 Molybdenum Cofactor Synthesis C EBA00_16795 PF12706 Beta-lactamase superfamily domain EBA00_16795 PF00753 Metallo-beta-lactamase superfamily EBA00_16805 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EBA00_16845 PF05598 Transposase domain (DUF772) EBA00_16855 PF00929 Exonuclease EBA00_16860 PF00075 RNase H EBA00_16870 PF00753 Metallo-beta-lactamase superfamily EBA00_16870 PF16123 Hydroxyacylglutathione hydrolase C-terminus EBA00_16875 PF01476 LysM domain EBA00_16875 PF05257 CHAP domain EBA00_16900 PF00216 Bacterial DNA-binding protein EBA00_16905 PF00004 ATPase family associated with various cellular activities (AAA) EBA00_16905 PF05362 Lon protease (S16) C-terminal proteolytic domain EBA00_16905 PF02190 ATP-dependent protease La (LON) substrate-binding domain EBA00_16910 PF06689 ClpX C4-type zinc finger EBA00_16910 PF10431 C-terminal, D2-small domain, of ClpB protein EBA00_16910 PF07724 AAA domain (Cdc48 subfamily) EBA00_16915 PF00574 Clp protease EBA00_16920 PF05698 Bacterial trigger factor protein (TF) C-terminus EBA00_16920 PF05697 Bacterial trigger factor protein (TF) EBA00_16945 PF05598 Transposase domain (DUF772) EBA00_16945 PF01609 Transposase DDE domain EBA00_16985 PF18324 Hypothetical protein TT1725 EBA00_16985 PF00180 Isocitrate/isopropylmalate dehydrogenase EBA00_16995 PF00462 Glutaredoxin EBA00_17000 PF13181 Tetratricopeptide repeat EBA00_17000 PF01435 Peptidase family M48 EBA00_17005 PF00072 Response regulator receiver domain EBA00_17005 PF00486 Transcriptional regulatory protein, C terminal EBA00_17010 PF00989 PAS fold EBA00_17010 PF11808 Phosphate regulon sensor protein PhoR EBA00_17010 PF00512 His Kinase A (phospho-acceptor) domain EBA00_17010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_17015 PF13089 Polyphosphate kinase N-terminal domain EBA00_17015 PF02503 Polyphosphate kinase middle domain EBA00_17015 PF13090 Polyphosphate kinase C-terminal domain 2 EBA00_17015 PF17941 Polyphosphate kinase C-terminal domain 1 EBA00_17020 PF02541 Ppx/GppA phosphatase family EBA00_17025 PF13439 Glycosyltransferase Family 4 EBA00_17025 PF00534 Glycosyl transferases group 1 EBA00_17030 PF01569 PAP2 superfamily EBA00_17035 PF00149 Calcineurin-like phosphoesterase EBA00_17060 PF04305 Protein of unknown function (DUF455) EBA00_17065 PF00156 Phosphoribosyl transferase domain EBA00_17080 PF08245 Mur ligase middle domain EBA00_17080 PF02875 Mur ligase family, glutamate ligase domain EBA00_17095 PF00300 Histidine phosphatase superfamily (branch 1) EBA00_17100 PF10459 Peptidase S46 EBA00_17120 PF08240 Alcohol dehydrogenase GroES-like domain EBA00_17120 PF00107 Zinc-binding dehydrogenase EBA00_17130 PF17850 CysA C-terminal regulatory domain EBA00_17130 PF00005 ABC transporter EBA00_17130 PF12857 TOBE-like domain EBA00_17135 PF00528 Binding-protein-dependent transport system inner membrane component EBA00_17140 PF00528 Binding-protein-dependent transport system inner membrane component EBA00_17150 PF00155 Aminotransferase class I and II EBA00_17160 PF00849 RNA pseudouridylate synthase EBA00_17170 PF00691 OmpA family EBA00_17170 PF05736 OprF membrane domain EBA00_17180 PF00107 Zinc-binding dehydrogenase EBA00_17180 PF08240 Alcohol dehydrogenase GroES-like domain EBA00_17185 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA00_17185 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EBA00_17205 PF05598 Transposase domain (DUF772) EBA00_17205 PF01609 Transposase DDE domain EBA00_17235 PF00043 Glutathione S-transferase, C-terminal domain EBA00_17235 PF02798 Glutathione S-transferase, N-terminal domain EBA00_17240 PF00056 lactate/malate dehydrogenase, NAD binding domain EBA00_17240 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EBA00_17245 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EBA00_17270 PF01474 Class-II DAHP synthetase family EBA00_17280 PF02600 Disulfide bond formation protein DsbB EBA00_17285 PF01196 Ribosomal protein L17 EBA00_17290 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EBA00_17290 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EBA00_17290 PF01000 RNA polymerase Rpb3/RpoA insert domain EBA00_17295 PF00163 Ribosomal protein S4/S9 N-terminal domain EBA00_17295 PF01479 S4 domain EBA00_17300 PF00411 Ribosomal protein S11 EBA00_17305 PF00416 Ribosomal protein S13/S18 EBA00_17310 PF00344 SecY translocase EBA00_17315 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EBA00_17320 PF00327 Ribosomal protein L30p/L7e EBA00_17325 PF00333 Ribosomal protein S5, N-terminal domain EBA00_17325 PF03719 Ribosomal protein S5, C-terminal domain EBA00_17330 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EBA00_17335 PF00347 Ribosomal protein L6 EBA00_17340 PF00410 Ribosomal protein S8 EBA00_17345 PF00253 Ribosomal protein S14p/S29e EBA00_17350 PF00673 ribosomal L5P family C-terminus EBA00_17350 PF00281 Ribosomal protein L5 EBA00_17355 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EBA00_17355 PF00467 KOW motif EBA00_17360 PF00238 Ribosomal protein L14p/L23e EBA00_17365 PF00366 Ribosomal protein S17 EBA00_17370 PF00831 Ribosomal L29 protein EBA00_17375 PF00252 Ribosomal protein L16p/L10e EBA00_17380 PF07650 KH domain EBA00_17380 PF00189 Ribosomal protein S3, C-terminal domain EBA00_17385 PF00237 Ribosomal protein L22p/L17e EBA00_17390 PF00203 Ribosomal protein S19 EBA00_17395 PF03947 Ribosomal Proteins L2, C-terminal domain EBA00_17395 PF00181 Ribosomal Proteins L2, RNA binding domain EBA00_17400 PF00276 Ribosomal protein L23 EBA00_17405 PF00573 Ribosomal protein L4/L1 family EBA00_17410 PF00297 Ribosomal protein L3 EBA00_17415 PF00338 Ribosomal protein S10p/S20e EBA00_17430 PF03144 Elongation factor Tu domain 2 EBA00_17430 PF00009 Elongation factor Tu GTP binding domain EBA00_17430 PF03143 Elongation factor Tu C-terminal domain EBA00_17435 PF00009 Elongation factor Tu GTP binding domain EBA00_17435 PF00679 Elongation factor G C-terminus EBA00_17435 PF14492 Elongation Factor G, domain II EBA00_17435 PF03764 Elongation factor G, domain IV EBA00_17435 PF03144 Elongation factor Tu domain 2 EBA00_17440 PF00177 Ribosomal protein S7p/S5e EBA00_17445 PF00164 Ribosomal protein S12/S23 EBA00_17450 PF04997 RNA polymerase Rpb1, domain 1 EBA00_17450 PF00623 RNA polymerase Rpb1, domain 2 EBA00_17450 PF04983 RNA polymerase Rpb1, domain 3 EBA00_17450 PF05000 RNA polymerase Rpb1, domain 4 EBA00_17450 PF04998 RNA polymerase Rpb1, domain 5 EBA00_17455 PF04561 RNA polymerase Rpb2, domain 2 EBA00_17455 PF10385 RNA polymerase beta subunit external 1 domain EBA00_17455 PF00562 RNA polymerase Rpb2, domain 6 EBA00_17455 PF04560 RNA polymerase Rpb2, domain 7 EBA00_17455 PF04563 RNA polymerase beta subunit EBA00_17455 PF04565 RNA polymerase Rpb2, domain 3 EBA00_17460 PF16320 Ribosomal protein L7/L12 dimerisation domain EBA00_17460 PF00542 Ribosomal protein L7/L12 C-terminal domain EBA00_17465 PF00466 Ribosomal protein L10 EBA00_17470 PF00687 Ribosomal protein L1p/L10e family EBA00_17475 PF00298 Ribosomal protein L11, RNA binding domain EBA00_17475 PF03946 Ribosomal protein L11, N-terminal domain EBA00_17485 PF00467 KOW motif EBA00_17485 PF02357 Transcription termination factor nusG EBA00_17490 PF00584 SecE/Sec61-gamma subunits of protein translocation complex EBA00_17500 PF00009 Elongation factor Tu GTP binding domain EBA00_17500 PF03144 Elongation factor Tu domain 2 EBA00_17500 PF03143 Elongation factor Tu C-terminal domain EBA00_17520 PF01926 50S ribosome-binding GTPase EBA00_17520 PF06071 Protein of unknown function (DUF933) EBA00_17525 PF01195 Peptidyl-tRNA hydrolase EBA00_17530 PF01386 Ribosomal L25p family EBA00_17530 PF14693 Ribosomal protein TL5, C-terminal domain EBA00_17535 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EBA00_17535 PF14572 Phosphoribosyl synthetase-associated domain EBA00_17545 PF00288 GHMP kinases N terminal domain EBA00_17545 PF08544 GHMP kinases C terminal EBA00_17550 PF03550 Outer membrane lipoprotein LolB EBA00_17560 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain EBA00_17560 PF01488 Shikimate / quinate 5-dehydrogenase EBA00_17560 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain EBA00_17565 PF00472 RF-1 domain EBA00_17565 PF03462 PCRF domain EBA00_17575 PF00994 Probable molybdopterin binding domain EBA00_17580 PF03976 Polyphosphate kinase 2 (PPK2) EBA00_17590 PF00708 Acylphosphatase EBA00_17595 PF08534 Redoxin EBA00_17600 PF03631 Virulence factor BrkB EBA00_17605 PF03358 NADPH-dependent FMN reductase EBA00_17620 PF17189 Glycosyl hydrolase family 30 beta sandwich domain EBA00_17620 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain EBA00_17630 PF04073 Aminoacyl-tRNA editing domain EBA00_17640 PF01063 Amino-transferase class IV EBA00_17665 PF02233 NAD(P) transhydrogenase beta subunit EBA00_17670 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch EBA00_17695 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch EBA00_17695 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EBA00_17695 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EBA00_17710 PF01612 3'-5' exonuclease EBA00_17710 PF01367 5'-3' exonuclease, C-terminal SAM fold EBA00_17710 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EBA00_17710 PF00476 DNA polymerase family A EBA00_17715 PF00293 NUDIX domain EBA00_17725 PF00561 alpha/beta hydrolase fold EBA00_17750 PF05175 Methyltransferase small domain EBA00_17750 PF17827 PrmC N-terminal domain EBA00_17755 PF00578 AhpC/TSA family EBA00_17755 PF10417 C-terminal domain of 1-Cys peroxiredoxin EBA00_17760 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA00_17760 PF13192 Thioredoxin domain EBA00_17765 PF03466 LysR substrate binding domain EBA00_17765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA00_17775 PF01272 Transcription elongation factor, GreA/GreB, C-term EBA00_17775 PF03449 Transcription elongation factor, N-terminal EBA00_17780 PF00923 Transaldolase/Fructose-6-phosphate aldolase EBA00_17785 PF01625 Peptide methionine sulfoxide reductase EBA00_17795 PF00196 Bacterial regulatory proteins, luxR family EBA00_17795 PF00072 Response regulator receiver domain EBA00_17805 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain EBA00_17805 PF00749 tRNA synthetases class I (E and Q), catalytic domain EBA00_17840 PF01728 FtsJ-like methyltransferase EBA00_17840 PF18125 RlmM ferredoxin-like domain EBA00_17845 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EBA00_17845 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EBA00_17850 PF08450 SMP-30/Gluconolactonase/LRE-like region EBA00_17870 PF00378 Enoyl-CoA hydratase/isomerase EBA00_17875 PF00171 Aldehyde dehydrogenase family EBA00_17880 PF13193 AMP-binding enzyme C-terminal domain EBA00_17880 PF00501 AMP-binding enzyme EBA00_17885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA00_17885 PF03466 LysR substrate binding domain EBA00_17890 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase EBA00_17890 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit EBA00_17895 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase EBA00_17900 PF00392 Bacterial regulatory proteins, gntR family EBA00_17900 PF07729 FCD domain EBA00_17920 PF01494 FAD binding domain EBA00_17925 PF01494 FAD binding domain EBA00_17940 PF01923 Cobalamin adenosyltransferase EBA00_17945 PF00850 Histone deacetylase domain EBA00_17950 PF04453 LPS transport system D EBA00_17950 PF03968 OstA-like protein EBA00_17955 PF00639 PPIC-type PPIASE domain EBA00_17955 PF09312 SurA N-terminal domain EBA00_17960 PF04166 Pyridoxal phosphate biosynthetic protein PdxA EBA00_17970 PF05598 Transposase domain (DUF772) EBA00_17975 PF00398 Ribosomal RNA adenine dimethylase EBA00_17980 PF04379 ApaG domain EBA00_17985 PF00149 Calcineurin-like phosphoesterase EBA00_17990 PF00186 Dihydrofolate reductase EBA00_18000 PF00303 Thymidylate synthase EBA00_18005 PF01790 Prolipoprotein diacylglyceryl transferase EBA00_18025 PF01219 Prokaryotic diacylglycerol kinase EBA00_18040 PF08521 Two-component sensor kinase N-terminal EBA00_18040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_18040 PF00512 His Kinase A (phospho-acceptor) domain EBA00_18045 PF00486 Transcriptional regulatory protein, C terminal EBA00_18045 PF00072 Response regulator receiver domain EBA00_18050 PF13472 GDSL-like Lipase/Acylhydrolase family EBA00_18055 PF00005 ABC transporter EBA00_18065 PF02668 Taurine catabolism dioxygenase TauD, TfdA family EBA00_18075 PF00005 ABC transporter EBA00_18105 PF00248 Aldo/keto reductase family EBA00_18115 PF01773 Na+ dependent nucleoside transporter N-terminus EBA00_18115 PF07662 Na+ dependent nucleoside transporter C-terminus EBA00_18115 PF07670 Nucleoside recognition EBA00_18120 PF00294 pfkB family carbohydrate kinase EBA00_18130 PF01207 Dihydrouridine synthase (Dus) EBA00_18145 PF02772 S-adenosylmethionine synthetase, central domain EBA00_18145 PF00438 S-adenosylmethionine synthetase, N-terminal domain EBA00_18145 PF02773 S-adenosylmethionine synthetase, C-terminal domain EBA00_18150 PF00328 Histidine phosphatase superfamily (branch 2) EBA00_18170 PF00665 Integrase core domain EBA00_18170 PF13936 Helix-turn-helix domain EBA00_18185 PF00311 Phosphoenolpyruvate carboxylase EBA00_18195 PF05221 S-adenosyl-L-homocysteine hydrolase EBA00_18195 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain EBA00_18200 PF13649 Methyltransferase domain EBA00_18235 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EBA00_18255 PF00082 Subtilase family EBA00_18255 PF09286 Pro-kumamolisin, activation domain EBA00_18260 PF02801 Beta-ketoacyl synthase, C-terminal domain EBA00_18260 PF08240 Alcohol dehydrogenase GroES-like domain EBA00_18260 PF16197 Ketoacyl-synthetase C-terminal extension EBA00_18260 PF00109 Beta-ketoacyl synthase, N-terminal domain EBA00_18260 PF14765 Polyketide synthase dehydratase EBA00_18260 PF08659 KR domain EBA00_18260 PF00698 Acyl transferase domain EBA00_18260 PF00107 Zinc-binding dehydrogenase EBA00_18260 PF00550 Phosphopantetheine attachment site EBA00_18275 PF02219 Methylenetetrahydrofolate reductase EBA00_18290 PF00293 NUDIX domain EBA00_18300 PF07516 SecA Wing and Scaffold domain EBA00_18300 PF01043 SecA preprotein cross-linking domain EBA00_18300 PF02810 SEC-C motif EBA00_18300 PF07517 SecA DEAD-like domain EBA00_18305 PF01464 Transglycosylase SLT domain EBA00_18305 PF10145 Phage-related minor tail protein EBA00_18305 PF01551 Peptidase family M23 EBA00_18315 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase EBA00_18320 PF00091 Tubulin/FtsZ family, GTPase domain EBA00_18320 PF12327 FtsZ family, C-terminal domain EBA00_18325 PF02491 SHS2 domain inserted in FTSA EBA00_18330 PF08478 POTRA domain, FtsQ-type EBA00_18330 PF03799 Cell division protein FtsQ EBA00_18335 PF07478 D-ala D-ala ligase C-terminus EBA00_18335 PF01820 D-ala D-ala ligase N-terminus EBA00_18340 PF02875 Mur ligase family, glutamate ligase domain EBA00_18340 PF01225 Mur ligase family, catalytic domain EBA00_18340 PF08245 Mur ligase middle domain EBA00_18345 PF03033 Glycosyltransferase family 28 N-terminal domain EBA00_18345 PF04101 Glycosyltransferase family 28 C-terminal domain EBA00_18350 PF01098 Cell cycle protein EBA00_18355 PF00953 Glycosyl transferase family 4 EBA00_18360 PF08245 Mur ligase middle domain EBA00_18360 PF01225 Mur ligase family, catalytic domain EBA00_18360 PF02875 Mur ligase family, glutamate ligase domain EBA00_18365 PF02875 Mur ligase family, glutamate ligase domain EBA00_18365 PF08245 Mur ligase middle domain EBA00_18365 PF01225 Mur ligase family, catalytic domain EBA00_18370 PF00905 Penicillin binding protein transpeptidase domain EBA00_18370 PF03717 Penicillin-binding Protein dimerisation domain EBA00_18375 PF04999 Cell division protein FtsL EBA00_18380 PF01795 MraW methylase family EBA00_18385 PF02381 MraZ protein, putative antitoxin-like EBA00_18410 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EBA00_18420 PF02021 Uncharacterised protein family UPF0102 EBA00_18430 PF01565 FAD binding domain EBA00_18430 PF02913 FAD linked oxidases, C-terminal domain EBA00_18460 PF00486 Transcriptional regulatory protein, C terminal EBA00_18460 PF00072 Response regulator receiver domain EBA00_18465 PF02702 Osmosensitive K+ channel His kinase sensor domain EBA00_18465 PF13492 GAF domain EBA00_18465 PF13493 Domain of unknown function (DUF4118) EBA00_18465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_18465 PF00512 His Kinase A (phospho-acceptor) domain EBA00_18470 PF02669 K+-transporting ATPase, c chain EBA00_18480 PF03814 Potassium-transporting ATPase A subunit EBA00_18505 PF02769 AIR synthase related protein, C-terminal domain EBA00_18505 PF00586 AIR synthase related protein, N-terminal domain EBA00_18510 PF01029 NusB family EBA00_18515 PF00885 6,7-dimethyl-8-ribityllumazine synthase EBA00_18520 PF00925 GTP cyclohydrolase II EBA00_18520 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EBA00_18525 PF00677 Lumazine binding domain EBA00_18535 PF01872 RibD C-terminal domain EBA00_18535 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EBA00_18545 PF03477 ATP cone domain EBA00_18555 PF00464 Serine hydroxymethyltransferase EBA00_18575 PF12848 ABC transporter EBA00_18575 PF00005 ABC transporter EBA00_18590 PF05598 Transposase domain (DUF772) EBA00_18590 PF01609 Transposase DDE domain EBA00_18600 PF00756 Putative esterase EBA00_18605 PF04828 Glutathione-dependent formaldehyde-activating enzyme EBA00_18610 PF00107 Zinc-binding dehydrogenase EBA00_18610 PF08240 Alcohol dehydrogenase GroES-like domain EBA00_18615 PF02583 Metal-sensitive transcriptional repressor EBA00_18630 PF00486 Transcriptional regulatory protein, C terminal EBA00_18630 PF00072 Response regulator receiver domain EBA00_18635 PF16527 Two-component sensor protein CpxA, periplasmic domain EBA00_18635 PF00672 HAMP domain EBA00_18635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_18635 PF00512 His Kinase A (phospho-acceptor) domain EBA00_18665 PF04107 Glutamate-cysteine ligase family 2(GCS2) EBA00_18675 PF01926 50S ribosome-binding GTPase EBA00_18680 PF00034 Cytochrome c EBA00_18720 PF01609 Transposase DDE domain EBA00_18720 PF05598 Transposase domain (DUF772) EBA00_18725 PF01966 HD domain EBA00_18725 PF01743 Poly A polymerase head domain EBA00_18725 PF12627 Probable RNA and SrmB- binding site of polymerase A EBA00_18740 PF14883 Hypothetical glycosyl hydrolase family 13 EBA00_18740 PF01522 Polysaccharide deacetylase EBA00_18745 PF00535 Glycosyl transferase family 2 EBA00_18760 PF01979 Amidohydrolase family EBA00_18765 PF01380 SIS domain EBA00_18770 PF00356 Bacterial regulatory proteins, lacI family EBA00_18775 PF07690 Major Facilitator Superfamily EBA00_18795 PF02837 Glycosyl hydrolases family 2, sugar binding domain EBA00_18795 PF02836 Glycosyl hydrolases family 2, TIM barrel domain EBA00_18795 PF16355 Domain of unknown function (DUF4982) EBA00_18795 PF00703 Glycosyl hydrolases family 2 EBA00_18795 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 EBA00_18840 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EBA00_18845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_18845 PF00512 His Kinase A (phospho-acceptor) domain EBA00_18850 PF00072 Response regulator receiver domain EBA00_18855 PF01590 GAF domain EBA00_18855 PF00512 His Kinase A (phospho-acceptor) domain EBA00_18855 PF00360 Phytochrome region EBA00_18855 PF08446 PAS fold EBA00_18855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_18860 PF04972 BON domain EBA00_18865 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EBA00_18865 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EBA00_18870 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EBA00_18870 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EBA00_18905 PF01467 Cytidylyltransferase-like EBA00_18905 PF00293 NUDIX domain EBA00_18915 PF17804 Tail specific protease N-terminal domain EBA00_18915 PF03572 Peptidase family S41 EBA00_18915 PF00595 PDZ domain EBA00_18915 PF11818 C-terminal domain of tail specific protease (DUF3340) EBA00_18920 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family EBA00_18920 PF04055 Radical SAM superfamily EBA00_18925 PF03099 Biotin/lipoate A/B protein ligase family EBA00_18930 PF04359 Protein of unknown function (DUF493) EBA00_18945 PF07943 Penicillin-binding protein 5, C-terminal domain EBA00_18945 PF00768 D-alanyl-D-alanine carboxypeptidase EBA00_18950 PF05036 Sporulation related domain EBA00_18950 PF03330 Lytic transglycolase EBA00_18955 PF13406 Transglycosylase SLT domain EBA00_18960 PF00295 Glycosyl hydrolases family 28 EBA00_18980 PF01098 Cell cycle protein EBA00_18985 PF00905 Penicillin binding protein transpeptidase domain EBA00_18985 PF03717 Penicillin-binding Protein dimerisation domain EBA00_18995 PF04085 rod shape-determining protein MreC EBA00_19005 PF00294 pfkB family carbohydrate kinase EBA00_19020 PF01433 Peptidase family M1 domain EBA00_19020 PF11838 ERAP1-like C-terminal domain EBA00_19025 PF03707 Bacterial signalling protein N terminal repeat EBA00_19025 PF00990 Diguanylate cyclase, GGDEF domain EBA00_19025 PF00563 EAL domain EBA00_19030 PF01209 ubiE/COQ5 methyltransferase family EBA00_19045 PF13673 Acetyltransferase (GNAT) domain EBA00_19055 PF00004 ATPase family associated with various cellular activities (AAA) EBA00_19055 PF07724 AAA domain (Cdc48 subfamily) EBA00_19055 PF10431 C-terminal, D2-small domain, of ClpB protein EBA00_19060 PF00227 Proteasome subunit EBA00_19070 PF00589 Phage integrase family EBA00_19070 PF02899 Phage integrase, N-terminal SAM-like domain EBA00_19080 PF01678 Diaminopimelate epimerase EBA00_19090 PF04304 Protein of unknown function (DUF454) EBA00_19095 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain EBA00_19095 PF00326 Prolyl oligopeptidase family EBA00_19100 PF00155 Aminotransferase class I and II EBA00_19110 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain EBA00_19110 PF00326 Prolyl oligopeptidase family EBA00_19135 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain EBA00_19135 PF03900 Porphobilinogen deaminase, C-terminal domain EBA00_19140 PF04397 LytTr DNA-binding domain EBA00_19140 PF00072 Response regulator receiver domain EBA00_19145 PF06580 Histidine kinase EBA00_19145 PF07694 5TMR of 5TMR-LYT EBA00_19155 PF13632 Glycosyl transferase family group 2 EBA00_19175 PF08448 PAS fold EBA00_19175 PF00990 Diguanylate cyclase, GGDEF domain EBA00_19180 PF00916 Sulfate permease family EBA00_19180 PF01740 STAS domain EBA00_19185 PF00553 Cellulose binding domain EBA00_19185 PF00150 Cellulase (glycosyl hydrolase family 5) EBA00_19215 PF13188 PAS domain EBA00_19215 PF03707 Bacterial signalling protein N terminal repeat EBA00_19215 PF00990 Diguanylate cyclase, GGDEF domain EBA00_19215 PF00563 EAL domain EBA00_19250 PF01204 Trehalase EBA00_19260 PF05598 Transposase domain (DUF772) EBA00_19295 PF01544 CorA-like Mg2+ transporter protein EBA00_19305 PF00324 Amino acid permease EBA00_19315 PF00553 Cellulose binding domain EBA00_19315 PF01341 Glycosyl hydrolases family 6 EBA00_19315 PF00041 Fibronectin type III domain EBA00_19320 PF03330 Lytic transglycolase EBA00_19325 PF00892 EamA-like transporter family EBA00_19340 PF07759 Protein of unknown function (DUF1615) EBA00_19380 PF00106 short chain dehydrogenase EBA00_19390 PF03377 TAL effector repeat EBA00_19425 PF16671 Actin cross-linking domain EBA00_19425 PF04717 Type VI secretion system, phage-baseplate injector EBA00_19430 PF05598 Transposase domain (DUF772) EBA00_19445 PF05598 Transposase domain (DUF772) EBA00_19455 PF00456 Transketolase, thiamine diphosphate binding domain EBA00_19455 PF17831 Pyruvate dehydrogenase E1 component middle domain EBA00_19480 PF04264 YceI-like domain EBA00_19485 PF00881 Nitroreductase family EBA00_19515 PF05598 Transposase domain (DUF772) EBA00_19525 PF02592 Putative vitamin uptake transporter EBA00_19530 PF08335 GlnD PII-uridylyltransferase EBA00_19530 PF03710 Glutamate-ammonia ligase adenylyltransferase EBA00_19540 PF08450 SMP-30/Gluconolactonase/LRE-like region EBA00_19555 PF00793 DAHP synthetase I family EBA00_19565 PF05598 Transposase domain (DUF772) EBA00_19565 PF01609 Transposase DDE domain EBA00_19575 PF01609 Transposase DDE domain EBA00_19575 PF05598 Transposase domain (DUF772) EBA00_19590 PF00118 TCP-1/cpn60 chaperonin family EBA00_19595 PF00166 Chaperonin 10 Kd subunit EBA00_19615 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA00_19620 PF03458 UPF0126 domain EBA00_19625 PF04545 Sigma-70, region 4 EBA00_19625 PF04542 Sigma-70 region 2 EBA00_19630 PF03167 Uracil DNA glycosylase superfamily EBA00_19635 PF00072 Response regulator receiver domain EBA00_19640 PF18075 FtsX extracellular domain EBA00_19645 PF00005 ABC transporter EBA00_19650 PF00271 Helicase conserved C-terminal domain EBA00_19650 PF00270 DEAD/DEAH box helicase EBA00_19650 PF12300 ATP-dependent RNA helicase RhlB EBA00_19655 PF00085 Thioredoxin EBA00_19660 PF07497 Rho termination factor, RNA-binding domain EBA00_19660 PF07498 Rho termination factor, N-terminal domain EBA00_19660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EBA00_19690 PF03979 Sigma-70 factor, region 1.1 EBA00_19690 PF00140 Sigma-70 factor, region 1.2 EBA00_19690 PF04542 Sigma-70 region 2 EBA00_19690 PF04546 Sigma-70, non-essential region EBA00_19690 PF04539 Sigma-70 region 3 EBA00_19690 PF04545 Sigma-70, region 4 EBA00_19695 PF02580 D-Tyr-tRNA(Tyr) deacylase EBA00_19700 PF03279 Bacterial lipid A biosynthesis acyltransferase EBA00_19715 PF00925 GTP cyclohydrolase II EBA00_19735 PF00535 Glycosyl transferase family 2 EBA00_19750 PF01189 16S rRNA methyltransferase RsmB/F EBA00_19750 PF01029 NusB family EBA00_19755 PF02911 Formyl transferase, C-terminal domain EBA00_19755 PF00551 Formyl transferase EBA00_19760 PF01327 Polypeptide deformylase EBA00_19765 PF01476 LysM domain EBA00_19770 PF02481 DNA recombination-mediator protein A EBA00_19770 PF17782 DprA winged helix domain EBA00_19775 PF04361 Protein of unknown function (DUF494) EBA00_19780 PF07963 Prokaryotic N-terminal methylation motif EBA00_19780 PF00114 Pilin (bacterial filament) EBA00_19790 PF01131 DNA topoisomerase EBA00_19790 PF01751 Toprim domain EBA00_19790 PF13368 Topoisomerase C-terminal repeat EBA00_19795 PF01300 Telomere recombination EBA00_19820 PF01343 Peptidase family S49 EBA00_19825 PF01554 MatE EBA00_19845 PF18319 PriA DNA helicase Cys-rich region (CRR) domain EBA00_19845 PF18074 Primosomal protein N C-terminal domain EBA00_19845 PF17764 3′ DNA-binding domain (3′BD) EBA00_19845 PF00270 DEAD/DEAH box helicase EBA00_19845 PF00271 Helicase conserved C-terminal domain EBA00_19865 PF03091 CutA1 divalent ion tolerance protein EBA00_19870 PF11412 Disulphide bond corrector protein DsbC EBA00_19870 PF02683 Cytochrome C biogenesis protein transmembrane region EBA00_19880 PF01220 Dehydroquinase class II EBA00_19885 PF00364 Biotin-requiring enzyme EBA00_19895 PF00289 Biotin carboxylase, N-terminal domain EBA00_19895 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EBA00_19895 PF02785 Biotin carboxylase C-terminal domain EBA00_19935 PF01381 Helix-turn-helix EBA00_19950 PF02954 Bacterial regulatory protein, Fis family EBA00_19960 PF01066 CDP-alcohol phosphatidyltransferase EBA00_19965 PF01808 AICARFT/IMPCHase bienzyme EBA00_19965 PF02142 MGS-like domain EBA00_19970 PF02843 Phosphoribosylglycinamide synthetase, C domain EBA00_19970 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EBA00_19970 PF02844 Phosphoribosylglycinamide synthetase, N domain EBA00_19980 PF12805 FUSC-like inner membrane protein yccS EBA00_19985 PF07690 Major Facilitator Superfamily EBA00_19995 PF07690 Major Facilitator Superfamily EBA00_20015 PF03186 CobD/Cbib protein EBA00_20015 PF17113 Regulatory signalling modulator protein AmpE EBA00_20020 PF09297 NADH pyrophosphatase zinc ribbon domain EBA00_20020 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain EBA00_20020 PF00293 NUDIX domain EBA00_20030 PF01521 Iron-sulphur cluster biosynthesis EBA00_20050 PF00563 EAL domain EBA00_20050 PF00990 Diguanylate cyclase, GGDEF domain EBA00_20050 PF03707 Bacterial signalling protein N terminal repeat EBA00_20055 PF00072 Response regulator receiver domain EBA00_20055 PF01627 Hpt domain EBA00_20055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA00_20055 PF00672 HAMP domain EBA00_20055 PF00512 His Kinase A (phospho-acceptor) domain EBA00_20055 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EBA00_20060 PF00210 Ferritin-like domain EBA00_20065 PF04324 BFD-like [2Fe-2S] binding domain EBA00_20070 PF00293 NUDIX domain EBA00_20085 PF00380 Ribosomal protein S9/S16 EBA00_20090 PF00572 Ribosomal protein L13 EBA00_20095 PF03232 Ubiquinone biosynthesis protein COQ7 EBA00_20100 PF00893 Small Multidrug Resistance protein EBA00_20105 PF02675 S-adenosylmethionine decarboxylase EBA00_20110 PF00027 Cyclic nucleotide-binding domain EBA00_20110 PF00325 Bacterial regulatory proteins, crp family EBA00_20120 PF00218 Indole-3-glycerol phosphate synthase EBA00_20125 PF00591 Glycosyl transferase family, a/b domain EBA00_20125 PF02885 Glycosyl transferase family, helical bundle domain EBA00_20140 PF00117 Glutamine amidotransferase class-I EBA00_20155 PF04715 Anthranilate synthase component I, N terminal region EBA00_20155 PF00425 chorismate binding enzyme EBA00_20160 PF00781 Diacylglycerol kinase catalytic domain EBA00_20165 PF00583 Acetyltransferase (GNAT) family EBA00_20170 PF00834 Ribulose-phosphate 3 epimerase family EBA00_20175 PF00226 DnaJ domain EBA00_20175 PF05099 Tellurite resistance protein TerB EBA00_20180 PF01259 SAICAR synthetase EBA00_20210 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter EBA00_20210 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EBA00_20210 PF13244 Domain of unknown function (DUF4040) EBA00_20210 PF00361 Proton-conducting membrane transporter EBA00_20215 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EBA00_20220 PF00361 Proton-conducting membrane transporter EBA00_20230 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) EBA00_20235 PF03334 Na+/H+ antiporter subunit EBA00_20245 PF04209 homogentisate 1,2-dioxygenase EBA00_20250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EBA00_20255 PF01047 MarR family EBA00_20265 PF00854 POT family EBA00_20270 PF03301 Tryptophan 2,3-dioxygenase EBA00_20280 PF00676 Dehydrogenase E1 component EBA00_20285 PF02779 Transketolase, pyrimidine binding domain EBA00_20285 PF02780 Transketolase, C-terminal domain EBA00_20295 PF02817 e3 binding domain EBA00_20295 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EBA00_20295 PF00364 Biotin-requiring enzyme EBA00_20310 PF05598 Transposase domain (DUF772) EBA00_20310 PF01609 Transposase DDE domain EBA00_20320 PF00271 Helicase conserved C-terminal domain EBA00_20320 PF00270 DEAD/DEAH box helicase EBA00_20335 PF05598 Transposase domain (DUF772) EBA00_20340 PF05598 Transposase domain (DUF772) EBA00_20345 PF06903 VirK protein EBA00_20370 PF05598 Transposase domain (DUF772) EBA00_20375 PF13460 NAD(P)H-binding EBA00_20380 PF00128 Alpha amylase, catalytic domain EBA00_20380 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EBA00_20390 PF00128 Alpha amylase, catalytic domain EBA00_20395 PF02446 4-alpha-glucanotransferase EBA00_20400 PF11941 Domain of unknown function (DUF3459) EBA00_20400 PF00128 Alpha amylase, catalytic domain EBA00_20400 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EBA00_20405 PF00128 Alpha amylase, catalytic domain EBA00_20405 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EBA00_20405 PF02806 Alpha amylase, C-terminal all-beta domain EBA00_20410 PF00534 Glycosyl transferases group 1 EBA00_20410 PF08323 Starch synthase catalytic domain EBA00_20415 PF00990 Diguanylate cyclase, GGDEF domain EBA00_20415 PF00072 Response regulator receiver domain EBA00_20425 PF05661 Protein of unknown function (DUF808) EBA00_20435 PF03109 ABC1 family EBA00_20440 PF05598 Transposase domain (DUF772) EBA00_20440 PF01609 Transposase DDE domain EBA00_20450 PF12794 Mechanosensitive ion channel inner membrane domain 1 EBA00_20450 PF00924 Mechanosensitive ion channel EBA00_20450 PF12795 Mechanosensitive ion channel porin domain EBA00_20470 PF01464 Transglycosylase SLT domain EBA00_20485 PF01311 Bacterial export proteins, family 1 EBA00_20495 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EBA00_20495 PF02874 ATP synthase alpha/beta family, beta-barrel domain EBA00_20495 PF18269 T3SS EscN ATPase C-terminal domain EBA00_20510 PF01514 Secretory protein of YscJ/FliF family EBA00_20525 PF01312 FlhB HrpN YscU SpaS Family EBA00_20530 PF00771 FHIPEP family EBA00_20545 PF00813 FliP family EBA00_20550 PF01313 Bacterial export proteins, family 3 EBA00_20610 PF05819 NolX protein EBA00_20630 PF01040 UbiA prenyltransferase family EBA00_20640 PF06968 Biotin and Thiamin Synthesis associated domain EBA00_20640 PF04055 Radical SAM superfamily EBA00_20645 PF00155 Aminotransferase class I and II EBA00_20655 PF12697 Alpha/beta hydrolase family EBA00_20665 PF13649 Methyltransferase domain EBA00_20685 PF00291 Pyridoxal-phosphate dependent enzyme EBA00_20700 PF01134 Glucose inhibited division protein A EBA00_20700 PF13932 GidA associated domain EBA00_20725 PF01614 Bacterial transcriptional regulator EBA00_20725 PF09339 IclR helix-turn-helix domain EBA00_20740 PF02627 Carboxymuconolactone decarboxylase family EBA00_20745 PF12146 Serine aminopeptidase, S33 EBA00_20750 PF00206 Lyase EBA00_20750 PF10397 Adenylosuccinate lyase C-terminus EBA00_20765 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal EBA00_20765 PF00775 Dioxygenase EBA00_20770 PF02803 Thiolase, C-terminal domain EBA00_20770 PF00108 Thiolase, N-terminal domain EBA00_20775 PF01144 Coenzyme A transferase EBA00_20780 PF01144 Coenzyme A transferase EBA00_20785 PF00355 Rieske [2Fe-2S] domain EBA00_20790 PF00111 2Fe-2S iron-sulfur cluster binding domain EBA00_20790 PF00175 Oxidoreductase NAD-binding domain EBA00_20810 PF01494 FAD binding domain EBA00_20840 PF11871 Domain of unknown function (DUF3391) EBA00_20840 PF01966 HD domain EBA00_20845 PF07690 Major Facilitator Superfamily EBA00_20850 PF00132 Bacterial transferase hexapeptide (six repeats) EBA00_20855 PF03692 Putative zinc- or iron-chelating domain EBA00_20860 PF00920 Dehydratase family EBA00_20865 PF05598 Transposase domain (DUF772) EBA00_20870 PF00589 Phage integrase family EBA00_20870 PF13495 Phage integrase, N-terminal SAM-like domain EBA00_20875 PF16671 Actin cross-linking domain EBA00_20875 PF04717 Type VI secretion system, phage-baseplate injector EBA00_20880 PF03377 TAL effector repeat EBA00_20895 PF01609 Transposase DDE domain EBA00_20895 PF05598 Transposase domain (DUF772) EBA00_20925 PF01638 HxlR-like helix-turn-helix EBA00_20930 PF05368 NmrA-like family EBA00_20940 PF03812 2-keto-3-deoxygluconate permease EBA00_20945 PF01717 Cobalamin-independent synthase, Catalytic domain EBA00_20945 PF08267 Cobalamin-independent synthase, N-terminal domain EBA00_20955 PF03358 NADPH-dependent FMN reductase EBA00_20960 PF03466 LysR substrate binding domain EBA00_20960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA00_20965 PF02677 Epoxyqueuosine reductase QueH EBA00_20985 PF00072 Response regulator receiver domain EBA00_20985 PF00486 Transcriptional regulatory protein, C terminal EBA00_20990 PF00551 Formyl transferase EBA00_21010 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EBA00_21010 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EBA00_21015 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EBA00_21020 PF02146 Sir2 family EBA00_21030 PF07690 Major Facilitator Superfamily EBA00_21035 PF03466 LysR substrate binding domain EBA00_21035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA00_21055 PF01026 TatD related DNase EBA00_21100 PF01609 Transposase DDE domain EBA00_21100 PF05598 Transposase domain (DUF772) EBA00_21140 PF01546 Peptidase family M20/M25/M40 EBA00_21140 PF07687 Peptidase dimerisation domain EBA00_21145 PF00266 Aminotransferase class-V EBA00_21165 PF13454 FAD-NAD(P)-binding EBA00_21170 PF07308 Protein of unknown function (DUF1456) EBA00_21180 PF00271 Helicase conserved C-terminal domain EBA00_21180 PF04408 Helicase associated domain (HA2) EBA00_21180 PF00270 DEAD/DEAH box helicase EBA00_21180 PF08482 ATP-dependent helicase C-terminal EBA00_21195 PF00849 RNA pseudouridylate synthase EBA00_21210 PF16884 N-terminal domain of oxidoreductase EBA00_21210 PF00107 Zinc-binding dehydrogenase EBA00_21225 PF05598 Transposase domain (DUF772) EBA00_21250 PF00665 Integrase core domain EBA00_21250 PF13936 Helix-turn-helix domain EBA00_21270 PF02614 Glucuronate isomerase EBA00_21275 PF00331 Glycosyl hydrolase family 10 EBA00_21275 PF00553 Cellulose binding domain EBA00_21275 PF03422 Carbohydrate binding module (family 6) EBA00_21305 PF04616 Glycosyl hydrolases family 43 EBA00_21315 PF01609 Transposase DDE domain EBA00_21315 PF05598 Transposase domain (DUF772) EBA00_21345 PF08240 Alcohol dehydrogenase GroES-like domain EBA00_21345 PF14765 Polyketide synthase dehydratase EBA00_21345 PF00550 Phosphopantetheine attachment site EBA00_21345 PF00109 Beta-ketoacyl synthase, N-terminal domain EBA00_21345 PF02801 Beta-ketoacyl synthase, C-terminal domain EBA00_21345 PF00698 Acyl transferase domain EBA00_21345 PF16197 Ketoacyl-synthetase C-terminal extension EBA00_21345 PF08659 KR domain EBA00_21345 PF00107 Zinc-binding dehydrogenase EBA00_21350 PF01553 Acyltransferase EBA00_21365 PF00356 Bacterial regulatory proteins, lacI family EBA00_21380 PF04820 Tryptophan halogenase EBA00_21385 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EBA00_21390 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) EBA00_21395 PF04337 Protein of unknown function, DUF480 EBA00_21410 PF00580 UvrD/REP helicase N-terminal domain EBA00_21410 PF13361 UvrD-like helicase C-terminal domain EBA00_21415 PF00265 Thymidine kinase EBA00_21425 PF04349 Periplasmic glucan biosynthesis protein, MdoG EBA00_21435 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EBA00_21435 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EBA00_21435 PF06827 Zinc finger found in FPG and IleRS EBA00_21440 PF05598 Transposase domain (DUF772) EBA00_21475 PF00360 Phytochrome region EBA00_21475 PF13426 PAS domain EBA00_21475 PF08446 PAS fold EBA00_21475 PF01590 GAF domain EBA00_21480 PF01126 Heme oxygenase EBA00_21485 PF07690 Major Facilitator Superfamily EBA00_21490 PF01263 Aldose 1-epimerase EBA00_21500 PF02810 SEC-C motif EBA00_21505 PF01925 Sulfite exporter TauE/SafE EBA00_21510 PF05598 Transposase domain (DUF772) EBA00_21540 PF02463 RecF/RecN/SMC N terminal domain EBA00_21545 PF01227 GTP cyclohydrolase I EBA00_21575 PF00665 Integrase core domain EBA00_21575 PF13936 Helix-turn-helix domain EBA00_21585 PF00083 Sugar (and other) transporter EBA00_21590 PF05598 Transposase domain (DUF772) EBA00_21600 PF13091 PLD-like domain EBA00_21600 PF13396 Phospholipase_D-nuclease N-terminal EBA00_21645 PF00085 Thioredoxin EBA00_21660 PF13344 Haloacid dehalogenase-like hydrolase EBA00_21660 PF00293 NUDIX domain EBA00_21695 PF05532 CsbD-like EBA00_21715 PF00294 pfkB family carbohydrate kinase EBA00_21725 PF12241 Trans-2-enoyl-CoA reductase catalytic region EBA00_21725 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase EBA00_21725 PF07055 Enoyl reductase FAD binding domain EBA00_21745 PF01070 FMN-dependent dehydrogenase EBA00_21760 PF05598 Transposase domain (DUF772) EBA00_21770 PF07715 TonB-dependent Receptor Plug Domain EBA00_21770 PF00593 TonB dependent receptor EBA00_21775 PF00155 Aminotransferase class I and II EBA00_21780 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain EBA00_21800 PF05598 Transposase domain (DUF772) EBA00_21810 PF01609 Transposase DDE domain EBA00_21810 PF05598 Transposase domain (DUF772) EBA00_21840 PF03412 Peptidase C39 family EBA00_21840 PF00664 ABC transporter transmembrane region EBA00_21840 PF00005 ABC transporter EBA00_21845 PF05598 Transposase domain (DUF772) EBA00_21870 PF00849 RNA pseudouridylate synthase EBA00_21885 PF01131 DNA topoisomerase EBA00_21885 PF01396 Topoisomerase DNA binding C4 zinc finger EBA00_21885 PF01751 Toprim domain EBA00_21900 PF05598 Transposase domain (DUF772) EBA00_21900 PF01609 Transposase DDE domain EBA00_21920 PF05598 Transposase domain (DUF772) EBA00_21920 PF01609 Transposase DDE domain EBA00_21945 PF01609 Transposase DDE domain EBA00_21945 PF05598 Transposase domain (DUF772) EBA00_22015 PF13538 UvrD-like helicase C-terminal domain EBA00_22020 PF13361 UvrD-like helicase C-terminal domain EBA00_22020 PF12705 PD-(D/E)XK nuclease superfamily EBA00_22020 PF00580 UvrD/REP helicase N-terminal domain EBA00_22025 PF17946 RecC C-terminal domain EBA00_22030 PF00005 ABC transporter EBA00_22040 PF05598 Transposase domain (DUF772) EBA00_22050 PF05598 Transposase domain (DUF772) EBA00_22050 PF01609 Transposase DDE domain EBA00_22055 PF05598 Transposase domain (DUF772) EBA00_22055 PF01609 Transposase DDE domain EBA00_22065 PF00005 ABC transporter EBA00_22085 PF00005 ABC transporter EBA00_22090 PF02405 Permease MlaE EBA00_22095 PF02470 MlaD protein EBA00_22100 PF05494 MlaC protein EBA00_22110 PF04333 MlaA lipoprotein EBA00_22120 PF05598 Transposase domain (DUF772) EBA00_22125 PF00255 Glutathione peroxidase EBA00_22135 PF02646 RmuC family EBA00_22160 PF13556 PucR C-terminal helix-turn-helix domain EBA00_22160 PF07905 Purine catabolism regulatory protein-like family EBA00_22165 PF02595 Glycerate kinase family EBA00_22170 PF07690 Major Facilitator Superfamily EBA00_22185 PF17785 PUA-like domain EBA00_22185 PF10672 S-adenosylmethionine-dependent methyltransferase EBA00_22195 PF03741 Integral membrane protein TerC family EBA00_22200 PF01694 Rhomboid family EBA00_22205 PF03009 Glycerophosphoryl diester phosphodiesterase family EBA00_22215 PF01569 PAP2 superfamily EBA00_22220 PF12631 MnmE helical domain EBA00_22220 PF10396 GTP-binding protein TrmE N-terminus EBA00_22220 PF01926 50S ribosome-binding GTPase EBA00_22225 PF01522 Polysaccharide deacetylase EBA00_22230 PF02096 60Kd inner membrane protein EBA00_22230 PF14849 YidC periplasmic domain EBA00_22235 PF00825 Ribonuclease P EBA00_22240 PF00468 Ribosomal protein L34