locus-tag class description EBA01_00010 PF00308 Bacterial dnaA protein EBA01_00010 PF11638 DnaA N-terminal domain EBA01_00010 PF08299 Bacterial dnaA protein helix-turn-helix EBA01_00015 PF00712 DNA polymerase III beta subunit, N-terminal domain EBA01_00015 PF02767 DNA polymerase III beta subunit, central domain EBA01_00015 PF02768 DNA polymerase III beta subunit, C-terminal domain EBA01_00020 PF02463 RecF/RecN/SMC N terminal domain EBA01_00025 PF00204 DNA gyrase B EBA01_00025 PF00986 DNA gyrase B subunit, carboxyl terminus EBA01_00025 PF18053 DNA gyrase B subunit insert domain EBA01_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_00025 PF01751 Toprim domain EBA01_00035 PF01435 Peptidase family M48 EBA01_00045 PF03544 Gram-negative bacterial TonB protein C-terminal EBA01_00050 PF01618 MotA/TolQ/ExbB proton channel family EBA01_00055 PF02472 Biopolymer transport protein ExbD/TolR EBA01_00060 PF02472 Biopolymer transport protein ExbD/TolR EBA01_00065 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ EBA01_00090 PF05598 Transposase domain (DUF772) EBA01_00095 PF05598 Transposase domain (DUF772) EBA01_00095 PF01609 Transposase DDE domain EBA01_00100 PF04055 Radical SAM superfamily EBA01_00110 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) EBA01_00135 PF03572 Peptidase family S41 EBA01_00135 PF13180 PDZ domain EBA01_00140 PF01551 Peptidase family M23 EBA01_00150 PF04389 Peptidase family M28 EBA01_00160 PF00150 Cellulase (glycosyl hydrolase family 5) EBA01_00175 PF00150 Cellulase (glycosyl hydrolase family 5) EBA01_00185 PF00150 Cellulase (glycosyl hydrolase family 5) EBA01_00195 PF00107 Zinc-binding dehydrogenase EBA01_00195 PF08240 Alcohol dehydrogenase GroES-like domain EBA01_00220 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EBA01_00220 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA01_00225 PF00310 Glutamine amidotransferases class-II EBA01_00225 PF04898 Glutamate synthase central domain EBA01_00225 PF01493 GXGXG motif EBA01_00225 PF01645 Conserved region in glutamate synthase EBA01_00295 PF00270 DEAD/DEAH box helicase EBA01_00295 PF00271 Helicase conserved C-terminal domain EBA01_00295 PF09369 Domain of unknown function (DUF1998) EBA01_00300 PF03006 Haemolysin-III related EBA01_00330 PF00080 Copper/zinc superoxide dismutase (SODC) EBA01_00335 PF02954 Bacterial regulatory protein, Fis family EBA01_00335 PF00072 Response regulator receiver domain EBA01_00335 PF00158 Sigma-54 interaction domain EBA01_00340 PF00989 PAS fold EBA01_00340 PF00512 His Kinase A (phospho-acceptor) domain EBA01_00340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_00345 PF00909 Ammonium Transporter Family EBA01_00350 PF00543 Nitrogen regulatory protein P-II EBA01_00355 PF03951 Glutamine synthetase, beta-Grasp domain EBA01_00355 PF00120 Glutamine synthetase, catalytic domain EBA01_00360 PF02673 Bacitracin resistance protein BacA EBA01_00405 PF03061 Thioesterase superfamily EBA01_00410 PF13091 PLD-like domain EBA01_00425 PF01883 Iron-sulfur cluster assembly protein EBA01_00425 PF10609 NUBPL iron-transfer P-loop NTPase EBA01_00445 PF01381 Helix-turn-helix EBA01_00450 PF07804 HipA-like C-terminal domain EBA01_00450 PF13657 HipA N-terminal domain EBA01_00455 PF10017 Histidine-specific methyltransferase, SAM-dependent EBA01_00460 PF03781 Sulfatase-modifying factor enzyme 1 EBA01_00460 PF12867 DinB superfamily EBA01_00470 PF00528 Binding-protein-dependent transport system inner membrane component EBA01_00475 PF00571 CBS domain EBA01_00475 PF00005 ABC transporter EBA01_00490 PF00005 ABC transporter EBA01_00505 PF01734 Patatin-like phospholipase EBA01_00515 PF01037 Lrp/AsnC ligand binding domain EBA01_00520 PF00351 Biopterin-dependent aromatic amino acid hydroxylase EBA01_00550 PF00356 Bacterial regulatory proteins, lacI family EBA01_00585 PF00128 Alpha amylase, catalytic domain EBA01_00585 PF02806 Alpha amylase, C-terminal all-beta domain EBA01_00585 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EBA01_00590 PF16657 Maltogenic Amylase, C-terminal domain EBA01_00590 PF00128 Alpha amylase, catalytic domain EBA01_00595 PF00128 Alpha amylase, catalytic domain EBA01_00595 PF11896 Domain of unknown function (DUF3416) EBA01_00605 PF05598 Transposase domain (DUF772) EBA01_00605 PF01609 Transposase DDE domain EBA01_00615 PF02803 Thiolase, C-terminal domain EBA01_00615 PF00108 Thiolase, N-terminal domain EBA01_00655 PF00581 Rhodanese-like domain EBA01_00660 PF02556 Preprotein translocase subunit SecB EBA01_00665 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EBA01_00665 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EBA01_00675 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EBA01_00675 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EBA01_00675 PF00205 Thiamine pyrophosphate enzyme, central domain EBA01_00680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_00680 PF00512 His Kinase A (phospho-acceptor) domain EBA01_00685 PF00072 Response regulator receiver domain EBA01_00685 PF02954 Bacterial regulatory protein, Fis family EBA01_00685 PF00158 Sigma-54 interaction domain EBA01_00700 PF07690 Major Facilitator Superfamily EBA01_00705 PF01609 Transposase DDE domain EBA01_00705 PF05598 Transposase domain (DUF772) EBA01_00715 PF00588 SpoU rRNA Methylase family EBA01_00730 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EBA01_00730 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EBA01_00735 PF02661 Fic/DOC family EBA01_00735 PF13784 Fic/DOC family N-terminal EBA01_00740 PF00561 alpha/beta hydrolase fold EBA01_00750 PF03692 Putative zinc- or iron-chelating domain EBA01_00755 PF00501 AMP-binding enzyme EBA01_00760 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family EBA01_00775 PF07478 D-ala D-ala ligase C-terminus EBA01_00775 PF01820 D-ala D-ala ligase N-terminus EBA01_00790 PF03109 ABC1 family EBA01_00805 PF00849 RNA pseudouridylate synthase EBA01_00815 PF00472 RF-1 domain EBA01_00835 PF01432 Peptidase family M3 EBA01_00875 PF00326 Prolyl oligopeptidase family EBA01_00880 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EBA01_00880 PF02785 Biotin carboxylase C-terminal domain EBA01_00880 PF00289 Biotin carboxylase, N-terminal domain EBA01_00880 PF00364 Biotin-requiring enzyme EBA01_00890 PF01039 Carboxyl transferase domain EBA01_00895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EBA01_00895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EBA01_00895 PF02770 Acyl-CoA dehydrogenase, middle domain EBA01_00940 PF02492 CobW/HypB/UreG, nucleotide-binding domain EBA01_00940 PF07683 Cobalamin synthesis protein cobW C-terminal domain EBA01_00960 PF03969 AFG1-like ATPase EBA01_00965 PF01047 MarR family EBA01_00970 PF02566 OsmC-like protein EBA01_00990 PF03377 TAL effector repeat EBA01_00995 PF16671 Actin cross-linking domain EBA01_00995 PF04717 Type VI secretion system, phage-baseplate injector EBA01_01020 PF00248 Aldo/keto reductase family EBA01_01035 PF16884 N-terminal domain of oxidoreductase EBA01_01035 PF00107 Zinc-binding dehydrogenase EBA01_01050 PF00849 RNA pseudouridylate synthase EBA01_01065 PF08482 ATP-dependent helicase C-terminal EBA01_01065 PF00271 Helicase conserved C-terminal domain EBA01_01065 PF04408 Helicase associated domain (HA2) EBA01_01065 PF00270 DEAD/DEAH box helicase EBA01_01075 PF07308 Protein of unknown function (DUF1456) EBA01_01080 PF13454 FAD-NAD(P)-binding EBA01_01100 PF00266 Aminotransferase class-V EBA01_01105 PF07687 Peptidase dimerisation domain EBA01_01105 PF01546 Peptidase family M20/M25/M40 EBA01_01145 PF01609 Transposase DDE domain EBA01_01145 PF05598 Transposase domain (DUF772) EBA01_01190 PF01026 TatD related DNase EBA01_01210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA01_01210 PF03466 LysR substrate binding domain EBA01_01215 PF07690 Major Facilitator Superfamily EBA01_01225 PF02146 Sir2 family EBA01_01230 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EBA01_01235 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EBA01_01235 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EBA01_01255 PF00551 Formyl transferase EBA01_01260 PF00486 Transcriptional regulatory protein, C terminal EBA01_01260 PF00072 Response regulator receiver domain EBA01_01280 PF02677 Epoxyqueuosine reductase QueH EBA01_01285 PF03466 LysR substrate binding domain EBA01_01285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA01_01290 PF03358 NADPH-dependent FMN reductase EBA01_01300 PF01717 Cobalamin-independent synthase, Catalytic domain EBA01_01300 PF08267 Cobalamin-independent synthase, N-terminal domain EBA01_01305 PF03812 2-keto-3-deoxygluconate permease EBA01_01315 PF05368 NmrA-like family EBA01_01320 PF01638 HxlR-like helix-turn-helix EBA01_01355 PF01609 Transposase DDE domain EBA01_01355 PF05598 Transposase domain (DUF772) EBA01_01370 PF03377 TAL effector repeat EBA01_01375 PF04717 Type VI secretion system, phage-baseplate injector EBA01_01375 PF16671 Actin cross-linking domain EBA01_01380 PF13495 Phage integrase, N-terminal SAM-like domain EBA01_01380 PF00589 Phage integrase family EBA01_01385 PF05598 Transposase domain (DUF772) EBA01_01390 PF00920 Dehydratase family EBA01_01395 PF03692 Putative zinc- or iron-chelating domain EBA01_01400 PF00132 Bacterial transferase hexapeptide (six repeats) EBA01_01405 PF07690 Major Facilitator Superfamily EBA01_01410 PF01966 HD domain EBA01_01410 PF11871 Domain of unknown function (DUF3391) EBA01_01440 PF01494 FAD binding domain EBA01_01460 PF00175 Oxidoreductase NAD-binding domain EBA01_01460 PF00111 2Fe-2S iron-sulfur cluster binding domain EBA01_01465 PF00355 Rieske [2Fe-2S] domain EBA01_01470 PF01144 Coenzyme A transferase EBA01_01480 PF00108 Thiolase, N-terminal domain EBA01_01480 PF02803 Thiolase, C-terminal domain EBA01_01485 PF00775 Dioxygenase EBA01_01485 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal EBA01_01500 PF00206 Lyase EBA01_01500 PF10397 Adenylosuccinate lyase C-terminus EBA01_01505 PF12146 Serine aminopeptidase, S33 EBA01_01510 PF02627 Carboxymuconolactone decarboxylase family EBA01_01525 PF01614 Bacterial transcriptional regulator EBA01_01525 PF09339 IclR helix-turn-helix domain EBA01_01550 PF13932 GidA associated domain EBA01_01550 PF01134 Glucose inhibited division protein A EBA01_01565 PF00291 Pyridoxal-phosphate dependent enzyme EBA01_01585 PF13649 Methyltransferase domain EBA01_01595 PF12697 Alpha/beta hydrolase family EBA01_01605 PF00155 Aminotransferase class I and II EBA01_01610 PF04055 Radical SAM superfamily EBA01_01610 PF06968 Biotin and Thiamin Synthesis associated domain EBA01_01620 PF01040 UbiA prenyltransferase family EBA01_01640 PF05819 NolX protein EBA01_01695 PF01313 Bacterial export proteins, family 3 EBA01_01700 PF00813 FliP family EBA01_01715 PF00771 FHIPEP family EBA01_01720 PF01312 FlhB HrpN YscU SpaS Family EBA01_01735 PF01514 Secretory protein of YscJ/FliF family EBA01_01750 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EBA01_01750 PF02874 ATP synthase alpha/beta family, beta-barrel domain EBA01_01750 PF18269 T3SS EscN ATPase C-terminal domain EBA01_01760 PF01311 Bacterial export proteins, family 1 EBA01_01775 PF01464 Transglycosylase SLT domain EBA01_01795 PF12795 Mechanosensitive ion channel porin domain EBA01_01795 PF00924 Mechanosensitive ion channel EBA01_01795 PF12794 Mechanosensitive ion channel inner membrane domain 1 EBA01_01805 PF05598 Transposase domain (DUF772) EBA01_01805 PF01609 Transposase DDE domain EBA01_01810 PF03109 ABC1 family EBA01_01820 PF05661 Protein of unknown function (DUF808) EBA01_01830 PF00072 Response regulator receiver domain EBA01_01830 PF00990 Diguanylate cyclase, GGDEF domain EBA01_01835 PF00534 Glycosyl transferases group 1 EBA01_01835 PF08323 Starch synthase catalytic domain EBA01_01840 PF02806 Alpha amylase, C-terminal all-beta domain EBA01_01840 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EBA01_01840 PF00128 Alpha amylase, catalytic domain EBA01_01845 PF00128 Alpha amylase, catalytic domain EBA01_01845 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EBA01_01845 PF11941 Domain of unknown function (DUF3459) EBA01_01850 PF02446 4-alpha-glucanotransferase EBA01_01855 PF00128 Alpha amylase, catalytic domain EBA01_01865 PF00128 Alpha amylase, catalytic domain EBA01_01865 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EBA01_01870 PF13460 NAD(P)H-binding EBA01_01875 PF05598 Transposase domain (DUF772) EBA01_01895 PF06903 VirK protein EBA01_01910 PF00270 DEAD/DEAH box helicase EBA01_01910 PF00271 Helicase conserved C-terminal domain EBA01_01920 PF05598 Transposase domain (DUF772) EBA01_01920 PF01609 Transposase DDE domain EBA01_01935 PF02817 e3 binding domain EBA01_01935 PF00364 Biotin-requiring enzyme EBA01_01935 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EBA01_01945 PF02780 Transketolase, C-terminal domain EBA01_01945 PF02779 Transketolase, pyrimidine binding domain EBA01_01950 PF00676 Dehydrogenase E1 component EBA01_01960 PF03301 Tryptophan 2,3-dioxygenase EBA01_01965 PF00854 POT family EBA01_01975 PF01047 MarR family EBA01_01980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EBA01_01985 PF04209 homogentisate 1,2-dioxygenase EBA01_01995 PF03334 Na+/H+ antiporter subunit EBA01_02000 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) EBA01_02010 PF00361 Proton-conducting membrane transporter EBA01_02015 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EBA01_02020 PF13244 Domain of unknown function (DUF4040) EBA01_02020 PF00361 Proton-conducting membrane transporter EBA01_02020 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter EBA01_02020 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EBA01_02055 PF05099 Tellurite resistance protein TerB EBA01_02055 PF00226 DnaJ domain EBA01_02060 PF00834 Ribulose-phosphate 3 epimerase family EBA01_02065 PF00583 Acetyltransferase (GNAT) family EBA01_02070 PF00781 Diacylglycerol kinase catalytic domain EBA01_02075 PF00425 chorismate binding enzyme EBA01_02075 PF04715 Anthranilate synthase component I, N terminal region EBA01_02090 PF00117 Glutamine amidotransferase class-I EBA01_02105 PF00591 Glycosyl transferase family, a/b domain EBA01_02105 PF02885 Glycosyl transferase family, helical bundle domain EBA01_02110 PF00218 Indole-3-glycerol phosphate synthase EBA01_02120 PF00027 Cyclic nucleotide-binding domain EBA01_02120 PF00325 Bacterial regulatory proteins, crp family EBA01_02125 PF02675 S-adenosylmethionine decarboxylase EBA01_02130 PF00893 Small Multidrug Resistance protein EBA01_02135 PF03232 Ubiquinone biosynthesis protein COQ7 EBA01_02140 PF00572 Ribosomal protein L13 EBA01_02145 PF00380 Ribosomal protein S9/S16 EBA01_02160 PF00293 NUDIX domain EBA01_02165 PF04324 BFD-like [2Fe-2S] binding domain EBA01_02170 PF00210 Ferritin-like domain EBA01_02175 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EBA01_02175 PF00672 HAMP domain EBA01_02175 PF00072 Response regulator receiver domain EBA01_02175 PF01627 Hpt domain EBA01_02175 PF00512 His Kinase A (phospho-acceptor) domain EBA01_02175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_02180 PF00563 EAL domain EBA01_02180 PF00990 Diguanylate cyclase, GGDEF domain EBA01_02180 PF03707 Bacterial signalling protein N terminal repeat EBA01_02200 PF01521 Iron-sulphur cluster biosynthesis EBA01_02210 PF00293 NUDIX domain EBA01_02210 PF09297 NADH pyrophosphatase zinc ribbon domain EBA01_02210 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain EBA01_02215 PF17113 Regulatory signalling modulator protein AmpE EBA01_02215 PF03186 CobD/Cbib protein EBA01_02235 PF07690 Major Facilitator Superfamily EBA01_02245 PF07690 Major Facilitator Superfamily EBA01_02250 PF12805 FUSC-like inner membrane protein yccS EBA01_02260 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EBA01_02260 PF02843 Phosphoribosylglycinamide synthetase, C domain EBA01_02260 PF02844 Phosphoribosylglycinamide synthetase, N domain EBA01_02270 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system EBA01_02275 PF02142 MGS-like domain EBA01_02275 PF01808 AICARFT/IMPCHase bienzyme EBA01_02280 PF01066 CDP-alcohol phosphatidyltransferase EBA01_02290 PF02954 Bacterial regulatory protein, Fis family EBA01_02305 PF01381 Helix-turn-helix EBA01_02345 PF02785 Biotin carboxylase C-terminal domain EBA01_02345 PF00289 Biotin carboxylase, N-terminal domain EBA01_02345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EBA01_02355 PF00364 Biotin-requiring enzyme EBA01_02360 PF01220 Dehydroquinase class II EBA01_02375 PF03091 CutA1 divalent ion tolerance protein EBA01_02395 PF18319 PriA DNA helicase Cys-rich region (CRR) domain EBA01_02395 PF17764 3′ DNA-binding domain (3′BD) EBA01_02395 PF00271 Helicase conserved C-terminal domain EBA01_02395 PF18074 Primosomal protein N C-terminal domain EBA01_02395 PF00270 DEAD/DEAH box helicase EBA01_02415 PF01554 MatE EBA01_02420 PF01343 Peptidase family S49 EBA01_02445 PF01300 Telomere recombination EBA01_02450 PF01751 Toprim domain EBA01_02450 PF01131 DNA topoisomerase EBA01_02450 PF13368 Topoisomerase C-terminal repeat EBA01_02465 PF04361 Protein of unknown function (DUF494) EBA01_02470 PF02481 DNA recombination-mediator protein A EBA01_02470 PF17782 DprA winged helix domain EBA01_02475 PF01476 LysM domain EBA01_02480 PF01327 Polypeptide deformylase EBA01_02485 PF00551 Formyl transferase EBA01_02485 PF02911 Formyl transferase, C-terminal domain EBA01_02490 PF01029 NusB family EBA01_02490 PF01189 16S rRNA methyltransferase RsmB/F EBA01_02505 PF00535 Glycosyl transferase family 2 EBA01_02525 PF00925 GTP cyclohydrolase II EBA01_02540 PF03279 Bacterial lipid A biosynthesis acyltransferase EBA01_02545 PF02580 D-Tyr-tRNA(Tyr) deacylase EBA01_02550 PF04546 Sigma-70, non-essential region EBA01_02550 PF03979 Sigma-70 factor, region 1.1 EBA01_02550 PF00140 Sigma-70 factor, region 1.2 EBA01_02550 PF04542 Sigma-70 region 2 EBA01_02550 PF04539 Sigma-70 region 3 EBA01_02550 PF04545 Sigma-70, region 4 EBA01_02720 PF00182 Chitinase class I EBA01_02775 PF01555 DNA methylase EBA01_02790 PF16671 Actin cross-linking domain EBA01_02790 PF04717 Type VI secretion system, phage-baseplate injector EBA01_02815 PF05598 Transposase domain (DUF772) EBA01_02845 PF07498 Rho termination factor, N-terminal domain EBA01_02845 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EBA01_02845 PF07497 Rho termination factor, RNA-binding domain EBA01_02850 PF00085 Thioredoxin EBA01_02855 PF00270 DEAD/DEAH box helicase EBA01_02855 PF12300 ATP-dependent RNA helicase RhlB EBA01_02855 PF00271 Helicase conserved C-terminal domain EBA01_02860 PF00005 ABC transporter EBA01_02865 PF18075 FtsX extracellular domain EBA01_02870 PF00072 Response regulator receiver domain EBA01_02875 PF03167 Uracil DNA glycosylase superfamily EBA01_02880 PF04542 Sigma-70 region 2 EBA01_02880 PF04545 Sigma-70, region 4 EBA01_02885 PF03458 UPF0126 domain EBA01_02890 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA01_02910 PF00166 Chaperonin 10 Kd subunit EBA01_02915 PF00118 TCP-1/cpn60 chaperonin family EBA01_02930 PF05598 Transposase domain (DUF772) EBA01_02930 PF01609 Transposase DDE domain EBA01_02945 PF00793 DAHP synthetase I family EBA01_02970 PF08335 GlnD PII-uridylyltransferase EBA01_02970 PF03710 Glutamate-ammonia ligase adenylyltransferase EBA01_02975 PF02592 Putative vitamin uptake transporter EBA01_03005 PF00881 Nitroreductase family EBA01_03010 PF04264 YceI-like domain EBA01_03035 PF00456 Transketolase, thiamine diphosphate binding domain EBA01_03035 PF17831 Pyruvate dehydrogenase E1 component middle domain EBA01_03045 PF05598 Transposase domain (DUF772) EBA01_03065 PF16671 Actin cross-linking domain EBA01_03065 PF04717 Type VI secretion system, phage-baseplate injector EBA01_03090 PF05598 Transposase domain (DUF772) EBA01_03110 PF03377 TAL effector repeat EBA01_03120 PF00106 short chain dehydrogenase EBA01_03160 PF07759 Protein of unknown function (DUF1615) EBA01_03175 PF00892 EamA-like transporter family EBA01_03180 PF03330 Lytic transglycolase EBA01_03185 PF00041 Fibronectin type III domain EBA01_03185 PF00553 Cellulose binding domain EBA01_03185 PF01341 Glycosyl hydrolases family 6 EBA01_03205 PF01544 CorA-like Mg2+ transporter protein EBA01_03235 PF05598 Transposase domain (DUF772) EBA01_03245 PF01204 Trehalase EBA01_03280 PF13188 PAS domain EBA01_03280 PF03707 Bacterial signalling protein N terminal repeat EBA01_03280 PF00990 Diguanylate cyclase, GGDEF domain EBA01_03280 PF00563 EAL domain EBA01_03305 PF00150 Cellulase (glycosyl hydrolase family 5) EBA01_03305 PF00553 Cellulose binding domain EBA01_03310 PF01740 STAS domain EBA01_03310 PF00916 Sulfate permease family EBA01_03315 PF00990 Diguanylate cyclase, GGDEF domain EBA01_03315 PF08448 PAS fold EBA01_03335 PF13632 Glycosyl transferase family group 2 EBA01_03345 PF06580 Histidine kinase EBA01_03345 PF07694 5TMR of 5TMR-LYT EBA01_03350 PF04397 LytTr DNA-binding domain EBA01_03350 PF00072 Response regulator receiver domain EBA01_03355 PF03900 Porphobilinogen deaminase, C-terminal domain EBA01_03355 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain EBA01_03380 PF00326 Prolyl oligopeptidase family EBA01_03380 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain EBA01_03390 PF00155 Aminotransferase class I and II EBA01_03395 PF00326 Prolyl oligopeptidase family EBA01_03395 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain EBA01_03400 PF04304 Protein of unknown function (DUF454) EBA01_03410 PF01678 Diaminopimelate epimerase EBA01_03420 PF00589 Phage integrase family EBA01_03420 PF02899 Phage integrase, N-terminal SAM-like domain EBA01_03430 PF00227 Proteasome subunit EBA01_03435 PF10431 C-terminal, D2-small domain, of ClpB protein EBA01_03435 PF07724 AAA domain (Cdc48 subfamily) EBA01_03435 PF00004 ATPase family associated with various cellular activities (AAA) EBA01_03445 PF13673 Acetyltransferase (GNAT) domain EBA01_03460 PF01209 ubiE/COQ5 methyltransferase family EBA01_03465 PF03707 Bacterial signalling protein N terminal repeat EBA01_03465 PF00990 Diguanylate cyclase, GGDEF domain EBA01_03465 PF00563 EAL domain EBA01_03470 PF11838 ERAP1-like C-terminal domain EBA01_03470 PF01433 Peptidase family M1 domain EBA01_03485 PF00294 pfkB family carbohydrate kinase EBA01_03495 PF04085 rod shape-determining protein MreC EBA01_03505 PF03717 Penicillin-binding Protein dimerisation domain EBA01_03505 PF00905 Penicillin binding protein transpeptidase domain EBA01_03510 PF01098 Cell cycle protein EBA01_03530 PF00295 Glycosyl hydrolases family 28 EBA01_03535 PF13406 Transglycosylase SLT domain EBA01_03540 PF03330 Lytic transglycolase EBA01_03540 PF05036 Sporulation related domain EBA01_03545 PF07943 Penicillin-binding protein 5, C-terminal domain EBA01_03545 PF00768 D-alanyl-D-alanine carboxypeptidase EBA01_03560 PF04359 Protein of unknown function (DUF493) EBA01_03565 PF03099 Biotin/lipoate A/B protein ligase family EBA01_03570 PF04055 Radical SAM superfamily EBA01_03570 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family EBA01_03575 PF17804 Tail specific protease N-terminal domain EBA01_03575 PF03572 Peptidase family S41 EBA01_03575 PF11818 C-terminal domain of tail specific protease (DUF3340) EBA01_03575 PF00595 PDZ domain EBA01_03585 PF01467 Cytidylyltransferase-like EBA01_03585 PF00293 NUDIX domain EBA01_03620 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EBA01_03620 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EBA01_03625 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EBA01_03625 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EBA01_03630 PF04972 BON domain EBA01_03635 PF08446 PAS fold EBA01_03635 PF00512 His Kinase A (phospho-acceptor) domain EBA01_03635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_03635 PF01590 GAF domain EBA01_03635 PF00360 Phytochrome region EBA01_03640 PF00072 Response regulator receiver domain EBA01_03645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_03645 PF00512 His Kinase A (phospho-acceptor) domain EBA01_03650 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EBA01_03675 PF05598 Transposase domain (DUF772) EBA01_03675 PF01609 Transposase DDE domain EBA01_03695 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 EBA01_03695 PF02837 Glycosyl hydrolases family 2, sugar binding domain EBA01_03695 PF16355 Domain of unknown function (DUF4982) EBA01_03695 PF00703 Glycosyl hydrolases family 2 EBA01_03695 PF02836 Glycosyl hydrolases family 2, TIM barrel domain EBA01_03715 PF07690 Major Facilitator Superfamily EBA01_03720 PF00356 Bacterial regulatory proteins, lacI family EBA01_03725 PF01380 SIS domain EBA01_03730 PF01979 Amidohydrolase family EBA01_03745 PF00535 Glycosyl transferase family 2 EBA01_03750 PF14883 Hypothetical glycosyl hydrolase family 13 EBA01_03750 PF01522 Polysaccharide deacetylase EBA01_03765 PF01743 Poly A polymerase head domain EBA01_03765 PF12627 Probable RNA and SrmB- binding site of polymerase A EBA01_03765 PF01966 HD domain EBA01_03770 PF01609 Transposase DDE domain EBA01_03770 PF05598 Transposase domain (DUF772) EBA01_03810 PF00034 Cytochrome c EBA01_03815 PF01926 50S ribosome-binding GTPase EBA01_03825 PF04107 Glutamate-cysteine ligase family 2(GCS2) EBA01_03855 PF16527 Two-component sensor protein CpxA, periplasmic domain EBA01_03855 PF00672 HAMP domain EBA01_03855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_03855 PF00512 His Kinase A (phospho-acceptor) domain EBA01_03860 PF00072 Response regulator receiver domain EBA01_03860 PF00486 Transcriptional regulatory protein, C terminal EBA01_03875 PF02583 Metal-sensitive transcriptional repressor EBA01_03880 PF08240 Alcohol dehydrogenase GroES-like domain EBA01_03880 PF00107 Zinc-binding dehydrogenase EBA01_03885 PF04828 Glutathione-dependent formaldehyde-activating enzyme EBA01_03890 PF00756 Putative esterase EBA01_03900 PF01609 Transposase DDE domain EBA01_03900 PF05598 Transposase domain (DUF772) EBA01_03915 PF12848 ABC transporter EBA01_03915 PF00005 ABC transporter EBA01_03935 PF00464 Serine hydroxymethyltransferase EBA01_03945 PF03477 ATP cone domain EBA01_03955 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EBA01_03955 PF01872 RibD C-terminal domain EBA01_03965 PF00677 Lumazine binding domain EBA01_03970 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EBA01_03970 PF00925 GTP cyclohydrolase II EBA01_03975 PF00885 6,7-dimethyl-8-ribityllumazine synthase EBA01_03980 PF01029 NusB family EBA01_03985 PF02769 AIR synthase related protein, C-terminal domain EBA01_03985 PF00586 AIR synthase related protein, N-terminal domain EBA01_04010 PF03814 Potassium-transporting ATPase A subunit EBA01_04020 PF02669 K+-transporting ATPase, c chain EBA01_04025 PF02702 Osmosensitive K+ channel His kinase sensor domain EBA01_04025 PF00512 His Kinase A (phospho-acceptor) domain EBA01_04025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_04025 PF13492 GAF domain EBA01_04025 PF13493 Domain of unknown function (DUF4118) EBA01_04030 PF00486 Transcriptional regulatory protein, C terminal EBA01_04030 PF00072 Response regulator receiver domain EBA01_04060 PF01565 FAD binding domain EBA01_04060 PF02913 FAD linked oxidases, C-terminal domain EBA01_04070 PF02021 Uncharacterised protein family UPF0102 EBA01_04080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EBA01_04105 PF02381 MraZ protein, putative antitoxin-like EBA01_04110 PF01795 MraW methylase family EBA01_04115 PF04999 Cell division protein FtsL EBA01_04120 PF00905 Penicillin binding protein transpeptidase domain EBA01_04120 PF03717 Penicillin-binding Protein dimerisation domain EBA01_04125 PF01225 Mur ligase family, catalytic domain EBA01_04125 PF02875 Mur ligase family, glutamate ligase domain EBA01_04125 PF08245 Mur ligase middle domain EBA01_04130 PF08245 Mur ligase middle domain EBA01_04130 PF02875 Mur ligase family, glutamate ligase domain EBA01_04130 PF01225 Mur ligase family, catalytic domain EBA01_04135 PF00953 Glycosyl transferase family 4 EBA01_04140 PF01098 Cell cycle protein EBA01_04145 PF04101 Glycosyltransferase family 28 C-terminal domain EBA01_04145 PF03033 Glycosyltransferase family 28 N-terminal domain EBA01_04150 PF01225 Mur ligase family, catalytic domain EBA01_04150 PF02875 Mur ligase family, glutamate ligase domain EBA01_04150 PF08245 Mur ligase middle domain EBA01_04155 PF07478 D-ala D-ala ligase C-terminus EBA01_04155 PF01820 D-ala D-ala ligase N-terminus EBA01_04160 PF03799 Cell division protein FtsQ EBA01_04160 PF08478 POTRA domain, FtsQ-type EBA01_04165 PF02491 SHS2 domain inserted in FTSA EBA01_04170 PF00091 Tubulin/FtsZ family, GTPase domain EBA01_04170 PF12327 FtsZ family, C-terminal domain EBA01_04175 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase EBA01_04185 PF10145 Phage-related minor tail protein EBA01_04185 PF01551 Peptidase family M23 EBA01_04185 PF01464 Transglycosylase SLT domain EBA01_04190 PF07516 SecA Wing and Scaffold domain EBA01_04190 PF02810 SEC-C motif EBA01_04190 PF07517 SecA DEAD-like domain EBA01_04190 PF01043 SecA preprotein cross-linking domain EBA01_04200 PF00293 NUDIX domain EBA01_04215 PF02219 Methylenetetrahydrofolate reductase EBA01_04230 PF00550 Phosphopantetheine attachment site EBA01_04230 PF00698 Acyl transferase domain EBA01_04230 PF14765 Polyketide synthase dehydratase EBA01_04230 PF00107 Zinc-binding dehydrogenase EBA01_04230 PF08240 Alcohol dehydrogenase GroES-like domain EBA01_04230 PF00109 Beta-ketoacyl synthase, N-terminal domain EBA01_04230 PF02801 Beta-ketoacyl synthase, C-terminal domain EBA01_04230 PF08659 KR domain EBA01_04230 PF16197 Ketoacyl-synthetase C-terminal extension EBA01_04235 PF00082 Subtilase family EBA01_04235 PF09286 Pro-kumamolisin, activation domain EBA01_04255 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EBA01_04290 PF13649 Methyltransferase domain EBA01_04295 PF05221 S-adenosyl-L-homocysteine hydrolase EBA01_04295 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain EBA01_04305 PF00311 Phosphoenolpyruvate carboxylase EBA01_04335 PF00665 Integrase core domain EBA01_04335 PF13936 Helix-turn-helix domain EBA01_04355 PF00328 Histidine phosphatase superfamily (branch 2) EBA01_04360 PF02772 S-adenosylmethionine synthetase, central domain EBA01_04360 PF00438 S-adenosylmethionine synthetase, N-terminal domain EBA01_04360 PF02773 S-adenosylmethionine synthetase, C-terminal domain EBA01_04375 PF01207 Dihydrouridine synthase (Dus) EBA01_04385 PF00294 pfkB family carbohydrate kinase EBA01_04390 PF01773 Na+ dependent nucleoside transporter N-terminus EBA01_04390 PF07670 Nucleoside recognition EBA01_04390 PF07662 Na+ dependent nucleoside transporter C-terminus EBA01_04400 PF00248 Aldo/keto reductase family EBA01_04430 PF00005 ABC transporter EBA01_04440 PF02668 Taurine catabolism dioxygenase TauD, TfdA family EBA01_04450 PF00005 ABC transporter EBA01_04455 PF13472 GDSL-like Lipase/Acylhydrolase family EBA01_04460 PF00486 Transcriptional regulatory protein, C terminal EBA01_04460 PF00072 Response regulator receiver domain EBA01_04465 PF00512 His Kinase A (phospho-acceptor) domain EBA01_04465 PF08521 Two-component sensor kinase N-terminal EBA01_04465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_04480 PF01219 Prokaryotic diacylglycerol kinase EBA01_04500 PF01790 Prolipoprotein diacylglyceryl transferase EBA01_04505 PF00303 Thymidylate synthase EBA01_04515 PF00186 Dihydrofolate reductase EBA01_04520 PF00149 Calcineurin-like phosphoesterase EBA01_04525 PF04379 ApaG domain EBA01_04530 PF00398 Ribosomal RNA adenine dimethylase EBA01_04535 PF05598 Transposase domain (DUF772) EBA01_04545 PF04166 Pyridoxal phosphate biosynthetic protein PdxA EBA01_04550 PF09312 SurA N-terminal domain EBA01_04550 PF00639 PPIC-type PPIASE domain EBA01_04555 PF04453 LPS transport system D EBA01_04555 PF03968 OstA-like protein EBA01_04560 PF00850 Histone deacetylase domain EBA01_04565 PF01923 Cobalamin adenosyltransferase EBA01_04580 PF01494 FAD binding domain EBA01_04585 PF01494 FAD binding domain EBA01_04605 PF07729 FCD domain EBA01_04605 PF00392 Bacterial regulatory proteins, gntR family EBA01_04610 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase EBA01_04615 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase EBA01_04615 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit EBA01_04620 PF03466 LysR substrate binding domain EBA01_04620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA01_04625 PF13193 AMP-binding enzyme C-terminal domain EBA01_04625 PF00501 AMP-binding enzyme EBA01_04630 PF00171 Aldehyde dehydrogenase family EBA01_04635 PF00378 Enoyl-CoA hydratase/isomerase EBA01_04655 PF08450 SMP-30/Gluconolactonase/LRE-like region EBA01_04660 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EBA01_04660 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EBA01_04665 PF18125 RlmM ferredoxin-like domain EBA01_04665 PF01728 FtsJ-like methyltransferase EBA01_04695 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain EBA01_04695 PF00749 tRNA synthetases class I (E and Q), catalytic domain EBA01_04705 PF00072 Response regulator receiver domain EBA01_04705 PF00196 Bacterial regulatory proteins, luxR family EBA01_04715 PF01625 Peptide methionine sulfoxide reductase EBA01_04720 PF00923 Transaldolase/Fructose-6-phosphate aldolase EBA01_04725 PF01272 Transcription elongation factor, GreA/GreB, C-term EBA01_04725 PF03449 Transcription elongation factor, N-terminal EBA01_04735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA01_04735 PF03466 LysR substrate binding domain EBA01_04740 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA01_04740 PF13192 Thioredoxin domain EBA01_04745 PF00578 AhpC/TSA family EBA01_04745 PF10417 C-terminal domain of 1-Cys peroxiredoxin EBA01_04750 PF05175 Methyltransferase small domain EBA01_04750 PF17827 PrmC N-terminal domain EBA01_04775 PF00561 alpha/beta hydrolase fold EBA01_04785 PF00293 NUDIX domain EBA01_04790 PF01612 3'-5' exonuclease EBA01_04790 PF01367 5'-3' exonuclease, C-terminal SAM fold EBA01_04790 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EBA01_04790 PF00476 DNA polymerase family A EBA01_04805 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EBA01_04805 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EBA01_04805 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch EBA01_04830 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch EBA01_04835 PF02233 NAD(P) transhydrogenase beta subunit EBA01_04860 PF01063 Amino-transferase class IV EBA01_04870 PF04073 Aminoacyl-tRNA editing domain EBA01_04880 PF17189 Glycosyl hydrolase family 30 beta sandwich domain EBA01_04880 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain EBA01_04895 PF03358 NADPH-dependent FMN reductase EBA01_04900 PF03631 Virulence factor BrkB EBA01_04905 PF08534 Redoxin EBA01_04910 PF00708 Acylphosphatase EBA01_04920 PF03976 Polyphosphate kinase 2 (PPK2) EBA01_04925 PF00994 Probable molybdopterin binding domain EBA01_04935 PF00472 RF-1 domain EBA01_04935 PF03462 PCRF domain EBA01_04940 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain EBA01_04940 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain EBA01_04940 PF01488 Shikimate / quinate 5-dehydrogenase EBA01_04950 PF03550 Outer membrane lipoprotein LolB EBA01_04955 PF08544 GHMP kinases C terminal EBA01_04955 PF00288 GHMP kinases N terminal domain EBA01_04965 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EBA01_04965 PF14572 Phosphoribosyl synthetase-associated domain EBA01_04970 PF01386 Ribosomal L25p family EBA01_04970 PF14693 Ribosomal protein TL5, C-terminal domain EBA01_04975 PF01195 Peptidyl-tRNA hydrolase EBA01_04980 PF06071 Protein of unknown function (DUF933) EBA01_04980 PF01926 50S ribosome-binding GTPase EBA01_05000 PF03144 Elongation factor Tu domain 2 EBA01_05000 PF03143 Elongation factor Tu C-terminal domain EBA01_05000 PF00009 Elongation factor Tu GTP binding domain EBA01_05010 PF00584 SecE/Sec61-gamma subunits of protein translocation complex EBA01_05015 PF02357 Transcription termination factor nusG EBA01_05015 PF00467 KOW motif EBA01_05025 PF03946 Ribosomal protein L11, N-terminal domain EBA01_05025 PF00298 Ribosomal protein L11, RNA binding domain EBA01_05030 PF00687 Ribosomal protein L1p/L10e family EBA01_05035 PF00466 Ribosomal protein L10 EBA01_05040 PF16320 Ribosomal protein L7/L12 dimerisation domain EBA01_05040 PF00542 Ribosomal protein L7/L12 C-terminal domain EBA01_05045 PF04560 RNA polymerase Rpb2, domain 7 EBA01_05045 PF04565 RNA polymerase Rpb2, domain 3 EBA01_05045 PF04563 RNA polymerase beta subunit EBA01_05045 PF10385 RNA polymerase beta subunit external 1 domain EBA01_05045 PF00562 RNA polymerase Rpb2, domain 6 EBA01_05045 PF04561 RNA polymerase Rpb2, domain 2 EBA01_05050 PF04997 RNA polymerase Rpb1, domain 1 EBA01_05050 PF04998 RNA polymerase Rpb1, domain 5 EBA01_05050 PF04983 RNA polymerase Rpb1, domain 3 EBA01_05050 PF05000 RNA polymerase Rpb1, domain 4 EBA01_05050 PF00623 RNA polymerase Rpb1, domain 2 EBA01_05055 PF00164 Ribosomal protein S12/S23 EBA01_05060 PF00177 Ribosomal protein S7p/S5e EBA01_05065 PF03144 Elongation factor Tu domain 2 EBA01_05065 PF00679 Elongation factor G C-terminus EBA01_05065 PF00009 Elongation factor Tu GTP binding domain EBA01_05065 PF03764 Elongation factor G, domain IV EBA01_05065 PF14492 Elongation Factor G, domain II EBA01_05070 PF03144 Elongation factor Tu domain 2 EBA01_05070 PF00009 Elongation factor Tu GTP binding domain EBA01_05070 PF03143 Elongation factor Tu C-terminal domain EBA01_05080 PF00338 Ribosomal protein S10p/S20e EBA01_05085 PF00297 Ribosomal protein L3 EBA01_05090 PF00573 Ribosomal protein L4/L1 family EBA01_05095 PF00276 Ribosomal protein L23 EBA01_05100 PF00181 Ribosomal Proteins L2, RNA binding domain EBA01_05100 PF03947 Ribosomal Proteins L2, C-terminal domain EBA01_05105 PF00203 Ribosomal protein S19 EBA01_05110 PF00237 Ribosomal protein L22p/L17e EBA01_05115 PF07650 KH domain EBA01_05115 PF00189 Ribosomal protein S3, C-terminal domain EBA01_05120 PF00252 Ribosomal protein L16p/L10e EBA01_05125 PF00831 Ribosomal L29 protein EBA01_05130 PF00366 Ribosomal protein S17 EBA01_05135 PF00238 Ribosomal protein L14p/L23e EBA01_05140 PF00467 KOW motif EBA01_05140 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EBA01_05145 PF00673 ribosomal L5P family C-terminus EBA01_05145 PF00281 Ribosomal protein L5 EBA01_05150 PF00253 Ribosomal protein S14p/S29e EBA01_05155 PF00410 Ribosomal protein S8 EBA01_05160 PF00347 Ribosomal protein L6 EBA01_05165 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EBA01_05170 PF00333 Ribosomal protein S5, N-terminal domain EBA01_05170 PF03719 Ribosomal protein S5, C-terminal domain EBA01_05175 PF00327 Ribosomal protein L30p/L7e EBA01_05180 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EBA01_05185 PF00344 SecY translocase EBA01_05190 PF00416 Ribosomal protein S13/S18 EBA01_05195 PF00411 Ribosomal protein S11 EBA01_05200 PF00163 Ribosomal protein S4/S9 N-terminal domain EBA01_05200 PF01479 S4 domain EBA01_05205 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EBA01_05205 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EBA01_05205 PF01000 RNA polymerase Rpb3/RpoA insert domain EBA01_05210 PF01196 Ribosomal protein L17 EBA01_05215 PF02600 Disulfide bond formation protein DsbB EBA01_05225 PF01474 Class-II DAHP synthetase family EBA01_05250 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EBA01_05255 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EBA01_05255 PF00056 lactate/malate dehydrogenase, NAD binding domain EBA01_05260 PF02798 Glutathione S-transferase, N-terminal domain EBA01_05260 PF00043 Glutathione S-transferase, C-terminal domain EBA01_05290 PF01609 Transposase DDE domain EBA01_05290 PF05598 Transposase domain (DUF772) EBA01_05310 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EBA01_05310 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA01_05315 PF08240 Alcohol dehydrogenase GroES-like domain EBA01_05315 PF00107 Zinc-binding dehydrogenase EBA01_05325 PF05736 OprF membrane domain EBA01_05325 PF00691 OmpA family EBA01_05335 PF00849 RNA pseudouridylate synthase EBA01_05345 PF00155 Aminotransferase class I and II EBA01_05355 PF00528 Binding-protein-dependent transport system inner membrane component EBA01_05360 PF00528 Binding-protein-dependent transport system inner membrane component EBA01_05365 PF12857 TOBE-like domain EBA01_05365 PF17850 CysA C-terminal regulatory domain EBA01_05365 PF00005 ABC transporter EBA01_05375 PF08240 Alcohol dehydrogenase GroES-like domain EBA01_05375 PF00107 Zinc-binding dehydrogenase EBA01_05395 PF10459 Peptidase S46 EBA01_05400 PF00300 Histidine phosphatase superfamily (branch 1) EBA01_05410 PF02875 Mur ligase family, glutamate ligase domain EBA01_05410 PF08245 Mur ligase middle domain EBA01_05425 PF00156 Phosphoribosyl transferase domain EBA01_05430 PF04305 Protein of unknown function (DUF455) EBA01_05455 PF00149 Calcineurin-like phosphoesterase EBA01_05460 PF01569 PAP2 superfamily EBA01_05465 PF13439 Glycosyltransferase Family 4 EBA01_05465 PF00534 Glycosyl transferases group 1 EBA01_05470 PF02541 Ppx/GppA phosphatase family EBA01_05475 PF17941 Polyphosphate kinase C-terminal domain 1 EBA01_05475 PF13089 Polyphosphate kinase N-terminal domain EBA01_05475 PF13090 Polyphosphate kinase C-terminal domain 2 EBA01_05475 PF02503 Polyphosphate kinase middle domain EBA01_05480 PF00989 PAS fold EBA01_05480 PF11808 Phosphate regulon sensor protein PhoR EBA01_05480 PF00512 His Kinase A (phospho-acceptor) domain EBA01_05480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_05485 PF00072 Response regulator receiver domain EBA01_05485 PF00486 Transcriptional regulatory protein, C terminal EBA01_05490 PF13181 Tetratricopeptide repeat EBA01_05490 PF01435 Peptidase family M48 EBA01_05495 PF00462 Glutaredoxin EBA01_05505 PF00180 Isocitrate/isopropylmalate dehydrogenase EBA01_05505 PF18324 Hypothetical protein TT1725 EBA01_05545 PF01609 Transposase DDE domain EBA01_05545 PF05598 Transposase domain (DUF772) EBA01_05570 PF05698 Bacterial trigger factor protein (TF) C-terminus EBA01_05570 PF05697 Bacterial trigger factor protein (TF) EBA01_05575 PF00574 Clp protease EBA01_05580 PF07724 AAA domain (Cdc48 subfamily) EBA01_05580 PF10431 C-terminal, D2-small domain, of ClpB protein EBA01_05580 PF06689 ClpX C4-type zinc finger EBA01_05585 PF05362 Lon protease (S16) C-terminal proteolytic domain EBA01_05585 PF00004 ATPase family associated with various cellular activities (AAA) EBA01_05585 PF02190 ATP-dependent protease La (LON) substrate-binding domain EBA01_05590 PF00216 Bacterial DNA-binding protein EBA01_05615 PF05257 CHAP domain EBA01_05615 PF01476 LysM domain EBA01_05620 PF16123 Hydroxyacylglutathione hydrolase C-terminus EBA01_05620 PF00753 Metallo-beta-lactamase superfamily EBA01_05630 PF00075 RNase H EBA01_05635 PF00929 Exonuclease EBA01_05645 PF05598 Transposase domain (DUF772) EBA01_05685 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EBA01_05695 PF12706 Beta-lactamase superfamily domain EBA01_05695 PF00753 Metallo-beta-lactamase superfamily EBA01_05700 PF04055 Radical SAM superfamily EBA01_05700 PF06463 Molybdenum Cofactor Synthesis C EBA01_05710 PF01967 MoaC family EBA01_05715 PF02597 ThiS family EBA01_05720 PF02391 MoaE protein EBA01_05750 PF12169 DNA polymerase III subunits gamma and tau domain III EBA01_05750 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding EBA01_05750 PF12170 DNA polymerase III tau subunit V interacting with alpha EBA01_05755 PF02575 YbaB/EbfC DNA-binding family EBA01_05760 PF02132 RecR protein EBA01_05760 PF13662 Toprim domain EBA01_05765 PF01230 HIT domain EBA01_05775 PF01841 Transglutaminase-like superfamily EBA01_05775 PF11992 Domain of unknown function (DUF3488) EBA01_05775 PF13559 Domain of unknown function (DUF4129) EBA01_05785 PF07726 ATPase family associated with various cellular activities (AAA) EBA01_05785 PF17863 AAA lid domain EBA01_05800 PF02545 Maf-like protein EBA01_05805 PF02620 Large ribosomal RNA subunit accumulation protein YceD EBA01_05810 PF01783 Ribosomal L32p protein family EBA01_05815 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EBA01_05815 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EBA01_05825 PF00698 Acyl transferase domain EBA01_05835 PF00550 Phosphopantetheine attachment site EBA01_05840 PF02801 Beta-ketoacyl synthase, C-terminal domain EBA01_05840 PF00109 Beta-ketoacyl synthase, N-terminal domain EBA01_05845 PF04715 Anthranilate synthase component I, N terminal region EBA01_05845 PF00425 chorismate binding enzyme EBA01_05850 PF02618 YceG-like family EBA01_05855 PF09115 DNA polymerase III, delta subunit, C terminal EBA01_05880 PF00158 Sigma-54 interaction domain EBA01_05880 PF06506 Propionate catabolism activator EBA01_05880 PF02954 Bacterial regulatory protein, Fis family EBA01_05890 PF00285 Citrate synthase, C-terminal domain EBA01_05895 PF00694 Aconitase C-terminal domain EBA01_05895 PF00330 Aconitase family (aconitate hydratase) EBA01_05915 PF04303 PrpF protein EBA01_05920 PF00593 TonB dependent receptor EBA01_05920 PF07715 TonB-dependent Receptor Plug Domain EBA01_05970 PF01556 DnaJ C terminal domain EBA01_05970 PF00226 DnaJ domain EBA01_05975 PF00072 Response regulator receiver domain EBA01_05985 PF01145 SPFH domain / Band 7 family EBA01_05985 PF12221 Bacterial membrane protein N terminal EBA01_05990 PF01145 SPFH domain / Band 7 family EBA01_06000 PF00709 Adenylosuccinate synthetase EBA01_06005 PF01433 Peptidase family M1 domain EBA01_06005 PF11838 ERAP1-like C-terminal domain EBA01_06020 PF01420 Type I restriction modification DNA specificity domain EBA01_06030 PF01420 Type I restriction modification DNA specificity domain EBA01_06035 PF02384 N-6 DNA Methylase EBA01_06045 PF04851 Type III restriction enzyme, res subunit EBA01_06045 PF08463 EcoEI R protein C-terminal EBA01_06045 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EBA01_06045 PF00271 Helicase conserved C-terminal domain EBA01_06085 PF13456 Reverse transcriptase-like EBA01_06085 PF00300 Histidine phosphatase superfamily (branch 1) EBA01_06115 PF01726 LexA DNA binding domain EBA01_06115 PF00717 Peptidase S24-like EBA01_06130 PF02811 PHP domain EBA01_06130 PF07733 Bacterial DNA polymerase III alpha NTPase domain EBA01_06130 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EBA01_06130 PF14579 Helix-hairpin-helix motif EBA01_06150 PF03169 OPT oligopeptide transporter protein EBA01_06165 PF07676 WD40-like Beta Propeller Repeat EBA01_06165 PF00326 Prolyl oligopeptidase family EBA01_06165 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region EBA01_06175 PF12833 Helix-turn-helix domain EBA01_06175 PF02311 AraC-like ligand binding domain EBA01_06220 PF00199 Catalase EBA01_06220 PF06628 Catalase-related immune-responsive EBA01_06220 PF18011 C-terminal domain found in long catalases EBA01_06250 PF02347 Glycine cleavage system P-protein EBA01_06270 PF00005 ABC transporter EBA01_06270 PF03412 Peptidase C39 family EBA01_06270 PF00664 ABC transporter transmembrane region EBA01_06290 PF08019 Phosphoethanolamine transferase EptA/EptB EBA01_06290 PF00884 Sulfatase EBA01_06300 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase EBA01_06305 PF00072 Response regulator receiver domain EBA01_06305 PF00486 Transcriptional regulatory protein, C terminal EBA01_06310 PF00512 His Kinase A (phospho-acceptor) domain EBA01_06310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_06310 PF08521 Two-component sensor kinase N-terminal EBA01_06320 PF03776 Septum formation topological specificity factor MinE EBA01_06325 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EBA01_06330 PF05209 Septum formation inhibitor MinC, N-terminal domain EBA01_06330 PF03775 Septum formation inhibitor MinC, C-terminal domain EBA01_06340 PF07730 Histidine kinase EBA01_06345 PF00072 Response regulator receiver domain EBA01_06345 PF00196 Bacterial regulatory proteins, luxR family EBA01_06360 PF00730 HhH-GPD superfamily base excision DNA repair protein EBA01_06385 PF02222 ATP-grasp domain EBA01_06430 PF00691 OmpA family EBA01_06430 PF04972 BON domain EBA01_06445 PF04717 Type VI secretion system, phage-baseplate injector EBA01_06455 PF00665 Integrase core domain EBA01_06455 PF13936 Helix-turn-helix domain EBA01_06465 PF05598 Transposase domain (DUF772) EBA01_06470 PF05598 Transposase domain (DUF772) EBA01_06480 PF05598 Transposase domain (DUF772) EBA01_06480 PF01609 Transposase DDE domain EBA01_06550 PF17871 AAA lid domain EBA01_06550 PF07724 AAA domain (Cdc48 subfamily) EBA01_06550 PF00004 ATPase family associated with various cellular activities (AAA) EBA01_06550 PF10431 C-terminal, D2-small domain, of ClpB protein EBA01_06560 PF04717 Type VI secretion system, phage-baseplate injector EBA01_06560 PF16671 Actin cross-linking domain EBA01_06585 PF01208 Uroporphyrinogen decarboxylase (URO-D) EBA01_06595 PF01761 3-dehydroquinate synthase EBA01_06600 PF01202 Shikimate kinase EBA01_06605 PF01243 Pyridoxamine 5'-phosphate oxidase EBA01_06605 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region EBA01_06615 PF04012 PspA/IM30 family EBA01_06640 PF03738 Glutathionylspermidine synthase preATP-grasp EBA01_06695 PF12706 Beta-lactamase superfamily domain EBA01_06705 PF05598 Transposase domain (DUF772) EBA01_06720 PF00324 Amino acid permease EBA01_06725 PF00196 Bacterial regulatory proteins, luxR family EBA01_06730 PF00561 alpha/beta hydrolase fold EBA01_06740 PF00324 Amino acid permease EBA01_06765 PF00145 C-5 cytosine-specific DNA methylase EBA01_06770 PF05598 Transposase domain (DUF772) EBA01_06770 PF01609 Transposase DDE domain EBA01_06780 PF02322 Cytochrome bd terminal oxidase subunit II EBA01_06785 PF00756 Putative esterase EBA01_06790 PF00571 CBS domain EBA01_06790 PF01769 Divalent cation transporter EBA01_06790 PF03448 MgtE intracellular N domain EBA01_06800 PF05524 PEP-utilising enzyme, N-terminal EBA01_06800 PF02896 PEP-utilising enzyme, TIM barrel domain EBA01_06800 PF00391 PEP-utilising enzyme, mobile domain EBA01_06805 PF00381 PTS HPr component phosphorylation site EBA01_06820 PF05598 Transposase domain (DUF772) EBA01_06820 PF01609 Transposase DDE domain EBA01_06835 PF03668 P-loop ATPase protein family EBA01_06840 PF07475 HPr Serine kinase C-terminal domain EBA01_06840 PF02603 HPr Serine kinase N terminus EBA01_06845 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EBA01_06850 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EBA01_06855 PF00309 Sigma-54 factor, Activator interacting domain (AID) EBA01_06855 PF04552 Sigma-54, DNA binding domain EBA01_06855 PF04963 Sigma-54 factor, core binding domain EBA01_06860 PF00005 ABC transporter EBA01_06865 PF03968 OstA-like protein EBA01_06880 PF01380 SIS domain EBA01_06880 PF00571 CBS domain EBA01_06885 PF01722 BolA-like protein EBA01_06890 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EBA01_06915 PF00551 Formyl transferase EBA01_06930 PF00586 AIR synthase related protein, N-terminal domain EBA01_06930 PF02769 AIR synthase related protein, C-terminal domain EBA01_06940 PF01594 AI-2E family transporter EBA01_06945 PF00308 Bacterial dnaA protein EBA01_06950 PF00483 Nucleotidyl transferase EBA01_06955 PF01636 Phosphotransferase enzyme family EBA01_06965 PF07687 Peptidase dimerisation domain EBA01_06965 PF01546 Peptidase family M20/M25/M40 EBA01_06995 PF01609 Transposase DDE domain EBA01_06995 PF05598 Transposase domain (DUF772) EBA01_07005 PF00355 Rieske [2Fe-2S] domain EBA01_07020 PF13936 Helix-turn-helix domain EBA01_07020 PF00665 Integrase core domain EBA01_07030 PF00266 Aminotransferase class-V EBA01_07035 PF01458 Uncharacterized protein family (UPF0051) EBA01_07040 PF00005 ABC transporter EBA01_07045 PF01458 Uncharacterized protein family (UPF0051) EBA01_07050 PF02082 Transcriptional regulator EBA01_07100 PF03807 NADP oxidoreductase coenzyme F420-dependent EBA01_07100 PF14748 Pyrroline-5-carboxylate reductase dimerisation EBA01_07105 PF01168 Alanine racemase, N-terminal domain EBA01_07115 PF00437 Type II/IV secretion system protein EBA01_07120 PF00437 Type II/IV secretion system protein EBA01_07140 PF00958 GMP synthase C terminal domain EBA01_07140 PF03352 Methyladenine glycosylase EBA01_07140 PF13673 Acetyltransferase (GNAT) domain EBA01_07140 PF00117 Glutamine amidotransferase class-I EBA01_07140 PF13302 Acetyltransferase (GNAT) domain EBA01_07155 PF02622 Uncharacterized ACR, COG1678 EBA01_07160 PF03652 Holliday junction resolvase EBA01_07165 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EBA01_07165 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EBA01_07175 PF02566 OsmC-like protein EBA01_07185 PF02567 Phenazine biosynthesis-like protein EBA01_07195 PF00696 Amino acid kinase family EBA01_07195 PF01842 ACT domain EBA01_07210 PF08245 Mur ligase middle domain EBA01_07225 PF01609 Transposase DDE domain EBA01_07225 PF05598 Transposase domain (DUF772) EBA01_07235 PF00348 Polyprenyl synthetase EBA01_07240 PF00436 Single-strand binding protein family EBA01_07245 PF00360 Phytochrome region EBA01_07245 PF01590 GAF domain EBA01_07245 PF00990 Diguanylate cyclase, GGDEF domain EBA01_07245 PF00563 EAL domain EBA01_07250 PF08990 Erythronolide synthase docking EBA01_07250 PF00109 Beta-ketoacyl synthase, N-terminal domain EBA01_07250 PF02801 Beta-ketoacyl synthase, C-terminal domain EBA01_07250 PF08659 KR domain EBA01_07250 PF00550 Phosphopantetheine attachment site EBA01_07250 PF14765 Polyketide synthase dehydratase EBA01_07250 PF08240 Alcohol dehydrogenase GroES-like domain EBA01_07250 PF00698 Acyl transferase domain EBA01_07250 PF16197 Ketoacyl-synthetase C-terminal extension EBA01_07250 PF09277 Erythronolide synthase, docking EBA01_07290 PF04328 Selenoprotein, putative EBA01_07295 PF02554 Carbon starvation protein CstA EBA01_07295 PF13722 5TM C-terminal transporter carbon starvation CstA EBA01_07300 PF02678 Pirin EBA01_07300 PF05726 Pirin C-terminal cupin domain EBA01_07310 PF04717 Type VI secretion system, phage-baseplate injector EBA01_07350 PF05598 Transposase domain (DUF772) EBA01_07370 PF05598 Transposase domain (DUF772) EBA01_07405 PF04493 Endonuclease V EBA01_07410 PF00300 Histidine phosphatase superfamily (branch 1) EBA01_07420 PF00072 Response regulator receiver domain EBA01_07420 PF01339 CheB methylesterase EBA01_07425 PF03705 CheR methyltransferase, all-alpha domain EBA01_07425 PF01739 CheR methyltransferase, SAM binding domain EBA01_07430 PF13426 PAS domain EBA01_07430 PF00990 Diguanylate cyclase, GGDEF domain EBA01_07430 PF00563 EAL domain EBA01_07435 PF01584 CheW-like domain EBA01_07440 PF00672 HAMP domain EBA01_07440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA01_07440 PF02203 Tar ligand binding domain homologue EBA01_07450 PF02895 Signal transducing histidine kinase, homodimeric domain EBA01_07450 PF09078 CheY binding EBA01_07450 PF01584 CheW-like domain EBA01_07450 PF01627 Hpt domain EBA01_07450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_07460 PF02559 CarD-like/TRCF domain EBA01_07460 PF00271 Helicase conserved C-terminal domain EBA01_07460 PF00270 DEAD/DEAH box helicase EBA01_07460 PF03461 TRCF domain EBA01_07460 PF17757 UvrB interaction domain EBA01_07470 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ EBA01_07495 PF00795 Carbon-nitrogen hydrolase EBA01_07505 PF00749 tRNA synthetases class I (E and Q), catalytic domain EBA01_07510 PF01475 Ferric uptake regulator family EBA01_07540 PF13936 Helix-turn-helix domain EBA01_07540 PF00665 Integrase core domain EBA01_07545 PF05598 Transposase domain (DUF772) EBA01_07615 PF00107 Zinc-binding dehydrogenase EBA01_07615 PF08240 Alcohol dehydrogenase GroES-like domain EBA01_07620 PF00654 Voltage gated chloride channel EBA01_07630 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EBA01_07630 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EBA01_07675 PF04545 Sigma-70, region 4 EBA01_07675 PF04539 Sigma-70 region 3 EBA01_07675 PF04542 Sigma-70 region 2 EBA01_07680 PF00270 DEAD/DEAH box helicase EBA01_07680 PF03880 DbpA RNA binding domain EBA01_07680 PF00271 Helicase conserved C-terminal domain EBA01_07685 PF00563 EAL domain EBA01_07685 PF00990 Diguanylate cyclase, GGDEF domain EBA01_07685 PF08448 PAS fold EBA01_07690 PF00849 RNA pseudouridylate synthase EBA01_07690 PF01479 S4 domain EBA01_07710 PF03737 Aldolase/RraA EBA01_07715 PF00144 Beta-lactamase EBA01_07720 PF00999 Sodium/hydrogen exchanger family EBA01_07725 PF00512 His Kinase A (phospho-acceptor) domain EBA01_07725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_07725 PF00672 HAMP domain EBA01_07730 PF00486 Transcriptional regulatory protein, C terminal EBA01_07730 PF00072 Response regulator receiver domain EBA01_07735 PF02321 Outer membrane efflux protein EBA01_07750 PF00873 AcrB/AcrD/AcrF family EBA01_07760 PF00005 ABC transporter EBA01_07760 PF00664 ABC transporter transmembrane region EBA01_07825 PF00085 Thioredoxin EBA01_07835 PF13603 Leucyl-tRNA synthetase, Domain 2 EBA01_07835 PF00133 tRNA synthetases class I (I, L, M and V) EBA01_07835 PF08264 Anticodon-binding domain of tRNA EBA01_07855 PF01467 Cytidylyltransferase-like EBA01_07875 PF02590 Predicted SPOUT methyltransferase EBA01_07885 PF03544 Gram-negative bacterial TonB protein C-terminal EBA01_07905 PF02545 Maf-like protein EBA01_07910 PF10150 Ribonuclease E/G family EBA01_07910 PF00575 S1 RNA binding domain EBA01_07915 PF13502 AsmA-like C-terminal region EBA01_07915 PF13116 Protein of unknown function EBA01_07925 PF01523 Putative modulator of DNA gyrase EBA01_07930 PF04751 Protein of unknown function (DUF615) EBA01_07935 PF01523 Putative modulator of DNA gyrase EBA01_07950 PF14521 Lysine-specific metallo-endopeptidase EBA01_07960 PF00348 Polyprenyl synthetase EBA01_07965 PF02609 Exonuclease VII small subunit EBA01_07970 PF11734 TilS substrate C-terminal domain EBA01_07970 PF01171 PP-loop family EBA01_07970 PF09179 TilS substrate binding domain EBA01_07975 PF00245 Alkaline phosphatase EBA01_07980 PF00375 Sodium:dicarboxylate symporter family EBA01_07995 PF00877 NlpC/P60 family EBA01_08000 PF00877 NlpC/P60 family EBA01_08005 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EBA01_08010 PF04235 Protein of unknown function (DUF418) EBA01_08015 PF01266 FAD dependent oxidoreductase EBA01_08020 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA01_08020 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EBA01_08045 PF01609 Transposase DDE domain EBA01_08045 PF05598 Transposase domain (DUF772) EBA01_08055 PF00665 Integrase core domain EBA01_08055 PF13936 Helix-turn-helix domain EBA01_08070 PF05598 Transposase domain (DUF772) EBA01_08085 PF00665 Integrase core domain EBA01_08085 PF13936 Helix-turn-helix domain EBA01_08090 PF01609 Transposase DDE domain EBA01_08090 PF05598 Transposase domain (DUF772) EBA01_08105 PF10609 NUBPL iron-transfer P-loop NTPase EBA01_08115 PF00692 dUTPase EBA01_08130 PF05598 Transposase domain (DUF772) EBA01_08130 PF01609 Transposase DDE domain EBA01_08145 PF01738 Dienelactone hydrolase family EBA01_08150 PF18693 TRAM domain EBA01_08150 PF00919 Uncharacterized protein family UPF0004 EBA01_08150 PF04055 Radical SAM superfamily EBA01_08160 PF01609 Transposase DDE domain EBA01_08160 PF05598 Transposase domain (DUF772) EBA01_08170 PF01272 Transcription elongation factor, GreA/GreB, C-term EBA01_08170 PF03449 Transcription elongation factor, N-terminal EBA01_08190 PF05872 Bacterial protein of unknown function (DUF853) EBA01_08210 PF02666 Phosphatidylserine decarboxylase EBA01_08215 PF02630 SCO1/SenC EBA01_08220 PF05175 Methyltransferase small domain EBA01_08225 PF01264 Chorismate synthase EBA01_08230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EBA01_08230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EBA01_08235 PF02774 Semialdehyde dehydrogenase, dimerisation domain EBA01_08235 PF01118 Semialdehyde dehydrogenase, NAD binding domain EBA01_08255 PF01416 tRNA pseudouridine synthase EBA01_08260 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase EBA01_08265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA01_08265 PF03466 LysR substrate binding domain EBA01_08270 PF00291 Pyridoxal-phosphate dependent enzyme EBA01_08280 PF00290 Tryptophan synthase alpha chain EBA01_08285 PF01039 Carboxyl transferase domain EBA01_08285 PF17848 Acetyl-coA carboxylase zinc finger domain EBA01_08290 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EBA01_08290 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EBA01_08290 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EBA01_08290 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EBA01_08305 PF00563 EAL domain EBA01_08305 PF00990 Diguanylate cyclase, GGDEF domain EBA01_08305 PF03707 Bacterial signalling protein N terminal repeat EBA01_08335 PF05598 Transposase domain (DUF772) EBA01_08350 PF00121 Triosephosphate isomerase EBA01_08365 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 EBA01_08370 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EBA01_08375 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit EBA01_08380 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit EBA01_08390 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EBA01_08390 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region EBA01_08390 PF10531 SLBB domain EBA01_08395 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal EBA01_08395 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region EBA01_08395 PF00384 Molybdopterin oxidoreductase EBA01_08400 PF00146 NADH dehydrogenase EBA01_08405 PF12838 4Fe-4S dicluster domain EBA01_08410 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 EBA01_08415 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EBA01_08420 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EBA01_08420 PF00361 Proton-conducting membrane transporter EBA01_08425 PF00361 Proton-conducting membrane transporter EBA01_08425 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus EBA01_08430 PF00361 Proton-conducting membrane transporter EBA01_08440 PF02576 RimP N-terminal domain EBA01_08440 PF17384 RimP C-terminal SH3 domain EBA01_08445 PF00575 S1 RNA binding domain EBA01_08445 PF08529 NusA N-terminal domain EBA01_08445 PF13184 NusA-like KH domain EBA01_08450 PF04760 Translation initiation factor IF-2, N-terminal region EBA01_08450 PF08364 Bacterial translation initiation factor IF-2 associated region EBA01_08450 PF11987 Translation-initiation factor 2 EBA01_08450 PF00009 Elongation factor Tu GTP binding domain EBA01_08455 PF02033 Ribosome-binding factor A EBA01_08460 PF16198 tRNA pseudouridylate synthase B C-terminal domain EBA01_08460 PF09157 Pseudouridine synthase II TruB, C-terminal EBA01_08460 PF01509 TruB family pseudouridylate synthase (N terminal domain) EBA01_08465 PF00312 Ribosomal protein S15 EBA01_08470 PF03725 3' exoribonuclease family, domain 2 EBA01_08470 PF00575 S1 RNA binding domain EBA01_08470 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain EBA01_08470 PF00013 KH domain EBA01_08470 PF01138 3' exoribonuclease family, domain 1 EBA01_08480 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain EBA01_08480 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain EBA01_08490 PF00731 AIR carboxylase EBA01_08495 PF02222 ATP-grasp domain EBA01_08495 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain EBA01_08500 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EBA01_08500 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EBA01_08505 PF00462 Glutaredoxin EBA01_08515 PF01914 MarC family integral membrane protein EBA01_08525 PF00593 TonB dependent receptor EBA01_08530 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases EBA01_08530 PF11892 Domain of unknown function (DUF3412) EBA01_08530 PF03641 Possible lysine decarboxylase EBA01_08535 PF07963 Prokaryotic N-terminal methylation motif EBA01_08535 PF12019 Type II transport protein GspH EBA01_08560 PF05567 Neisseria PilC beta-propeller domain EBA01_08575 PF07963 Prokaryotic N-terminal methylation motif EBA01_08575 PF00114 Pilin (bacterial filament) EBA01_08580 PF17757 UvrB interaction domain EBA01_08580 PF02151 UvrB/uvrC motif EBA01_08580 PF12344 Ultra-violet resistance protein B EBA01_08580 PF04851 Type III restriction enzyme, res subunit EBA01_08580 PF00271 Helicase conserved C-terminal domain EBA01_08610 PF01175 Urocanase Rossmann-like domain EBA01_08610 PF17391 Urocanase N-terminal domain EBA01_08610 PF17392 Urocanase C-terminal domain EBA01_08620 PF00221 Aromatic amino acid lyase EBA01_08625 PF07969 Amidohydrolase family EBA01_08635 PF00392 Bacterial regulatory proteins, gntR family EBA01_08635 PF07702 UTRA domain EBA01_08660 PF01794 Ferric reductase like transmembrane component EBA01_08670 PF00174 Oxidoreductase molybdopterin binding domain EBA01_08675 PF00266 Aminotransferase class-V EBA01_08680 PF01817 Chorismate mutase type II EBA01_08680 PF01842 ACT domain EBA01_08680 PF00800 Prephenate dehydratase EBA01_08685 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EBA01_08710 PF05598 Transposase domain (DUF772) EBA01_08710 PF01609 Transposase DDE domain EBA01_08715 PF03544 Gram-negative bacterial TonB protein C-terminal EBA01_08720 PF02403 Seryl-tRNA synthetase N-terminal domain EBA01_08720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EBA01_08730 PF02525 Flavodoxin-like fold EBA01_08735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA01_08735 PF03466 LysR substrate binding domain EBA01_08750 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin EBA01_08775 PF03377 TAL effector repeat EBA01_08795 PF02203 Tar ligand binding domain homologue EBA01_08795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA01_08795 PF00672 HAMP domain EBA01_08815 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EBA01_08815 PF00072 Response regulator receiver domain EBA01_08815 PF01627 Hpt domain EBA01_08815 PF00512 His Kinase A (phospho-acceptor) domain EBA01_08815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_08815 PF00672 HAMP domain EBA01_08820 PF06745 KaiC EBA01_08825 PF00072 Response regulator receiver domain EBA01_08825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_08825 PF13426 PAS domain EBA01_08835 PF03918 Cytochrome C biogenesis protein EBA01_08840 PF08534 Redoxin EBA01_08845 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal EBA01_08845 PF01578 Cytochrome C assembly protein EBA01_08850 PF03100 CcmE EBA01_08855 PF04995 Heme exporter protein D (CcmD) EBA01_08860 PF01578 Cytochrome C assembly protein EBA01_08865 PF00082 Subtilase family EBA01_08875 PF08281 Sigma-70, region 4 EBA01_08875 PF04542 Sigma-70 region 2 EBA01_08885 PF00034 Cytochrome c EBA01_08900 PF05523 WxcM-like, C-terminal EBA01_08920 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EBA01_08925 PF01943 Polysaccharide biosynthesis protein EBA01_08930 PF00535 Glycosyl transferase family 2 EBA01_08965 PF13579 Glycosyl transferase 4-like domain EBA01_08965 PF00534 Glycosyl transferases group 1 EBA01_08980 PF06745 KaiC EBA01_08985 PF00005 ABC transporter EBA01_08985 PF00664 ABC transporter transmembrane region EBA01_08995 PF00083 Sugar (and other) transporter EBA01_09015 PF00296 Luciferase-like monooxygenase EBA01_09030 PF01595 Cyclin M transmembrane N-terminal domain EBA01_09030 PF03471 Transporter associated domain EBA01_09030 PF00571 CBS domain EBA01_09045 PF01384 Phosphate transporter family EBA01_09065 PF00986 DNA gyrase B subunit, carboxyl terminus EBA01_09065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_09065 PF00204 DNA gyrase B EBA01_09065 PF01751 Toprim domain EBA01_09075 PF06418 CTP synthase N-terminus EBA01_09075 PF00117 Glutamine amidotransferase class-I EBA01_09080 PF00793 DAHP synthetase I family EBA01_09085 PF00113 Enolase, C-terminal TIM barrel domain EBA01_09085 PF03952 Enolase, N-terminal domain EBA01_09090 PF04977 Septum formation initiator EBA01_09095 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EBA01_09105 PF02542 YgbB family EBA01_09110 PF01142 tRNA pseudouridine synthase D (TruD) EBA01_09115 PF01713 Smr domain EBA01_09120 PF01975 Survival protein SurE EBA01_09130 PF09335 SNARE associated Golgi protein EBA01_09135 PF01476 LysM domain EBA01_09135 PF01551 Peptidase family M23 EBA01_09145 PF01985 CRS1 / YhbY (CRM) domain EBA01_09150 PF01728 FtsJ-like methyltransferase EBA01_09155 PF01434 Peptidase family M41 EBA01_09155 PF06480 FtsH Extracellular EBA01_09155 PF17862 AAA+ lid domain EBA01_09155 PF00004 ATPase family associated with various cellular activities (AAA) EBA01_09160 PF00809 Pterin binding enzyme EBA01_09170 PF17209 Hfq protein EBA01_09175 PF16360 GTP-binding GTPase Middle Region EBA01_09175 PF13167 GTP-binding GTPase N-terminal EBA01_09175 PF01926 50S ribosome-binding GTPase EBA01_09180 PF02464 Competence-damaged protein EBA01_09185 PF03109 ABC1 family EBA01_09190 PF01726 LexA DNA binding domain EBA01_09190 PF00717 Peptidase S24-like EBA01_09195 PF00154 recA bacterial DNA recombination protein EBA01_09205 PF02631 RecX family EBA01_09210 PF02272 DHHA1 domain EBA01_09210 PF01411 tRNA synthetases class II (A) EBA01_09210 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EBA01_09215 PF02599 Global regulator protein family EBA01_09270 PF02678 Pirin EBA01_09270 PF17954 Quercetinase C-terminal cupin domain EBA01_09275 PF03466 LysR substrate binding domain EBA01_09275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA01_09300 PF08543 Phosphomethylpyrimidine kinase EBA01_09300 PF02581 Thiamine monophosphate synthase EBA01_09310 PF13638 PIN domain EBA01_09310 PF02562 PhoH-like protein EBA01_09315 PF00578 AhpC/TSA family EBA01_09330 PF00701 Dihydrodipicolinate synthetase family EBA01_09340 PF11953 Domain of unknown function (DUF3470) EBA01_09340 PF00037 4Fe-4S binding domain EBA01_09345 PF05035 2-keto-3-deoxy-galactonokinase EBA01_09350 PF08450 SMP-30/Gluconolactonase/LRE-like region EBA01_09355 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EBA01_09355 PF13378 Enolase C-terminal domain-like EBA01_09360 PF01081 KDPG and KHG aldolase EBA01_09365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA01_09365 PF03466 LysR substrate binding domain EBA01_09385 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EBA01_09385 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EBA01_09395 PF00083 Sugar (and other) transporter EBA01_09415 PF01520 N-acetylmuramoyl-L-alanine amidase EBA01_09420 PF02649 Type I GTP cyclohydrolase folE2 EBA01_09430 PF12627 Probable RNA and SrmB- binding site of polymerase A EBA01_09430 PF01743 Poly A polymerase head domain EBA01_09430 PF12626 Polymerase A arginine-rich C-terminus EBA01_09435 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EBA01_09440 PF02548 Ketopantoate hydroxymethyltransferase EBA01_09445 PF02569 Pantoate-beta-alanine ligase EBA01_09450 PF02261 Aspartate decarboxylase EBA01_09455 PF00342 Phosphoglucose isomerase EBA01_09480 PF01915 Glycosyl hydrolase family 3 C-terminal domain EBA01_09480 PF00933 Glycosyl hydrolase family 3 N terminal domain EBA01_09480 PF14310 Fibronectin type III-like domain EBA01_09490 PF00474 Sodium:solute symporter family EBA01_09500 PF00360 Phytochrome region EBA01_09500 PF00990 Diguanylate cyclase, GGDEF domain EBA01_09500 PF01590 GAF domain EBA01_09500 PF00563 EAL domain EBA01_09510 PF02013 Cellulose or protein binding domain EBA01_09510 PF00150 Cellulase (glycosyl hydrolase family 5) EBA01_09520 PF00072 Response regulator receiver domain EBA01_09530 PF04551 GcpE protein EBA01_09535 PF01569 PAP2 superfamily EBA01_09545 PF07690 Major Facilitator Superfamily EBA01_09555 PF01177 Asp/Glu/Hydantoin racemase EBA01_09565 PF00892 EamA-like transporter family EBA01_09570 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EBA01_09570 PF01565 FAD binding domain EBA01_09575 PF01180 Dihydroorotate dehydrogenase EBA01_09595 PF00171 Aldehyde dehydrogenase family EBA01_09630 PF00742 Homoserine dehydrogenase EBA01_09630 PF00696 Amino acid kinase family EBA01_09630 PF03447 Homoserine dehydrogenase, NAD binding domain EBA01_09630 PF13840 ACT domain EBA01_09630 PF01842 ACT domain EBA01_09635 PF00288 GHMP kinases N terminal domain EBA01_09635 PF08544 GHMP kinases C terminal EBA01_09640 PF07519 Tannase and feruloyl esterase EBA01_09655 PF14821 Threonine synthase N terminus EBA01_09655 PF00291 Pyridoxal-phosphate dependent enzyme EBA01_09670 PF03129 Anticodon binding domain EBA01_09670 PF13393 Histidyl-tRNA synthetase EBA01_09695 PF08029 HisG, C-terminal domain EBA01_09695 PF01634 ATP phosphoribosyltransferase EBA01_09700 PF00815 Histidinol dehydrogenase EBA01_09705 PF00155 Aminotransferase class I and II EBA01_09710 PF00475 Imidazoleglycerol-phosphate dehydratase EBA01_09715 PF00117 Glutamine amidotransferase class-I EBA01_09720 PF00977 Histidine biosynthesis protein EBA01_09725 PF00977 Histidine biosynthesis protein EBA01_09730 PF01502 Phosphoribosyl-AMP cyclohydrolase EBA01_09730 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase EBA01_09755 PF03079 ARD/ARD' family EBA01_09760 PF00596 Class II Aldolase and Adducin N-terminal domain EBA01_09765 PF13520 Amino acid permease EBA01_09770 PF13520 Amino acid permease EBA01_09780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EBA01_09780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EBA01_09785 PF02913 FAD linked oxidases, C-terminal domain EBA01_09785 PF01565 FAD binding domain EBA01_09810 PF08207 Elongation factor P (EF-P) KOW-like domain EBA01_09810 PF01132 Elongation factor P (EF-P) OB domain EBA01_09810 PF09285 Elongation factor P, C-terminal EBA01_09815 PF00106 short chain dehydrogenase EBA01_09820 PF00682 HMGL-like EBA01_09830 PF00378 Enoyl-CoA hydratase/isomerase EBA01_09840 PF07670 Nucleoside recognition EBA01_09840 PF07664 Ferrous iron transport protein B C terminus EBA01_09840 PF02421 Ferrous iron transport protein B EBA01_09860 PF00155 Aminotransferase class I and II EBA01_09865 PF03475 3-alpha domain EBA01_09865 PF03473 MOSC domain EBA01_09870 PF05173 Dihydrodipicolinate reductase, C-terminus EBA01_09870 PF01113 Dihydrodipicolinate reductase, N-terminus EBA01_09875 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EBA01_09875 PF00117 Glutamine amidotransferase class-I EBA01_09885 PF02142 MGS-like domain EBA01_09885 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EBA01_09885 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EBA01_09890 PF01272 Transcription elongation factor, GreA/GreB, C-term EBA01_09890 PF03449 Transcription elongation factor, N-terminal EBA01_09900 PF02272 DHHA1 domain EBA01_09900 PF01368 DHH family EBA01_09900 PF17768 RecJ OB domain EBA01_09915 PF00072 Response regulator receiver domain EBA01_09915 PF04397 LytTr DNA-binding domain EBA01_09925 PF01336 OB-fold nucleic acid binding domain EBA01_09925 PF00152 tRNA synthetases class II (D, K and N) EBA01_09930 PF00072 Response regulator receiver domain EBA01_09940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_09940 PF00512 His Kinase A (phospho-acceptor) domain EBA01_09940 PF01627 Hpt domain EBA01_09940 PF00072 Response regulator receiver domain EBA01_09945 PF00378 Enoyl-CoA hydratase/isomerase EBA01_09950 PF00501 AMP-binding enzyme EBA01_09950 PF13193 AMP-binding enzyme C-terminal domain EBA01_09960 PF00330 Aconitase family (aconitate hydratase) EBA01_09960 PF00694 Aconitase C-terminal domain EBA01_09975 PF06434 Aconitate hydratase 2 N-terminus EBA01_09975 PF11791 Aconitate B N-terminal domain EBA01_09975 PF00330 Aconitase family (aconitate hydratase) EBA01_09980 PF00561 alpha/beta hydrolase fold EBA01_09990 PF00563 EAL domain EBA01_09990 PF00990 Diguanylate cyclase, GGDEF domain EBA01_09990 PF03707 Bacterial signalling protein N terminal repeat EBA01_09995 PF00072 Response regulator receiver domain EBA01_09995 PF01339 CheB methylesterase EBA01_10000 PF03975 CheD chemotactic sensory transduction EBA01_10005 PF03705 CheR methyltransferase, all-alpha domain EBA01_10005 PF01739 CheR methyltransferase, SAM binding domain EBA01_10010 PF02203 Tar ligand binding domain homologue EBA01_10010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA01_10010 PF00672 HAMP domain EBA01_10020 PF01584 CheW-like domain EBA01_10025 PF07317 Flagellar regulator YcgR EBA01_10025 PF07238 PilZ domain EBA01_10035 PF02203 Tar ligand binding domain homologue EBA01_10035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA01_10035 PF00672 HAMP domain EBA01_10040 PF00672 HAMP domain EBA01_10040 PF02203 Tar ligand binding domain homologue EBA01_10040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA01_10045 PF02203 Tar ligand binding domain homologue EBA01_10045 PF00672 HAMP domain EBA01_10045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA01_10060 PF00672 HAMP domain EBA01_10060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA01_10060 PF02203 Tar ligand binding domain homologue EBA01_10065 PF05598 Transposase domain (DUF772) EBA01_10070 PF00672 HAMP domain EBA01_10070 PF02203 Tar ligand binding domain homologue EBA01_10070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA01_10075 PF00672 HAMP domain EBA01_10075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA01_10075 PF02203 Tar ligand binding domain homologue EBA01_10105 PF00672 HAMP domain EBA01_10105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA01_10105 PF02203 Tar ligand binding domain homologue EBA01_10110 PF13936 Helix-turn-helix domain EBA01_10110 PF00665 Integrase core domain EBA01_10125 PF09078 CheY binding EBA01_10125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_10125 PF01584 CheW-like domain EBA01_10125 PF02895 Signal transducing histidine kinase, homodimeric domain EBA01_10125 PF01627 Hpt domain EBA01_10130 PF00072 Response regulator receiver domain EBA01_10140 PF01584 CheW-like domain EBA01_10145 PF13614 AAA domain EBA01_10150 PF00691 OmpA family EBA01_10150 PF13677 Membrane MotB of proton-channel complex MotA/MotB EBA01_10155 PF01618 MotA/TolQ/ExbB proton channel family EBA01_10175 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EBA01_10175 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EBA01_10190 PF00593 TonB dependent receptor EBA01_10190 PF07715 TonB-dependent Receptor Plug Domain EBA01_10210 PF17728 BsuBI/PstI restriction endonuclease HTH domain EBA01_10210 PF06616 BsuBI/PstI restriction endonuclease domain EBA01_10215 PF01609 Transposase DDE domain EBA01_10215 PF05598 Transposase domain (DUF772) EBA01_10260 PF05598 Transposase domain (DUF772) EBA01_10270 PF05598 Transposase domain (DUF772) EBA01_10280 PF02895 Signal transducing histidine kinase, homodimeric domain EBA01_10280 PF01584 CheW-like domain EBA01_10280 PF01627 Hpt domain EBA01_10280 PF07194 P2 response regulator binding domain EBA01_10280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_10285 PF04344 Chemotaxis phosphatase, CheZ EBA01_10290 PF00072 Response regulator receiver domain EBA01_10295 PF04539 Sigma-70 region 3 EBA01_10295 PF04545 Sigma-70, region 4 EBA01_10295 PF04542 Sigma-70 region 2 EBA01_10300 PF10609 NUBPL iron-transfer P-loop NTPase EBA01_10305 PF00448 SRP54-type protein, GTPase domain EBA01_10310 PF00771 FHIPEP family EBA01_10315 PF01312 FlhB HrpN YscU SpaS Family EBA01_10320 PF00990 Diguanylate cyclase, GGDEF domain EBA01_10320 PF03707 Bacterial signalling protein N terminal repeat EBA01_10320 PF00563 EAL domain EBA01_10325 PF00990 Diguanylate cyclase, GGDEF domain EBA01_10325 PF13188 PAS domain EBA01_10325 PF03707 Bacterial signalling protein N terminal repeat EBA01_10325 PF00563 EAL domain EBA01_10330 PF00563 EAL domain EBA01_10330 PF13188 PAS domain EBA01_10330 PF03707 Bacterial signalling protein N terminal repeat EBA01_10330 PF00990 Diguanylate cyclase, GGDEF domain EBA01_10335 PF01311 Bacterial export proteins, family 1 EBA01_10340 PF01313 Bacterial export proteins, family 3 EBA01_10345 PF00813 FliP family EBA01_10350 PF04347 Flagellar biosynthesis protein, FliO EBA01_10355 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EBA01_10360 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EBA01_10360 PF02154 Flagellar motor switch protein FliM EBA01_10380 PF18269 T3SS EscN ATPase C-terminal domain EBA01_10380 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EBA01_10390 PF14842 FliG N-terminal domain EBA01_10390 PF14841 FliG middle domain EBA01_10390 PF01706 FliG C-terminal domain EBA01_10395 PF08345 Flagellar M-ring protein C-terminal EBA01_10395 PF01514 Secretory protein of YscJ/FliF family EBA01_10400 PF02049 Flagellar hook-basal body complex protein FliE EBA01_10410 PF00535 Glycosyl transferase family 2 EBA01_10410 PF00534 Glycosyl transferases group 1 EBA01_10445 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EBA01_10445 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EBA01_10455 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EBA01_10460 PF00158 Sigma-54 interaction domain EBA01_10460 PF02954 Bacterial regulatory protein, Fis family EBA01_10460 PF00072 Response regulator receiver domain EBA01_10465 PF01339 CheB methylesterase EBA01_10465 PF00072 Response regulator receiver domain EBA01_10470 PF04963 Sigma-54 factor, core binding domain EBA01_10470 PF00309 Sigma-54 factor, Activator interacting domain (AID) EBA01_10470 PF04552 Sigma-54, DNA binding domain EBA01_10475 PF00196 Bacterial regulatory proteins, luxR family EBA01_10475 PF00072 Response regulator receiver domain EBA01_10490 PF02561 Flagellar protein FliS EBA01_10495 PF02465 Flagellar hook-associated protein 2 N-terminus EBA01_10495 PF07195 Flagellar hook-associated protein 2 C-terminus EBA01_10495 PF07196 Flagellin hook IN motif EBA01_10500 PF00669 Bacterial flagellin N-terminal helical region EBA01_10500 PF00700 Bacterial flagellin C-terminal helical region EBA01_10510 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EBA01_10510 PF07196 Flagellin hook IN motif EBA01_10515 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EBA01_10515 PF10135 Rod binding protein EBA01_10520 PF02119 Flagellar P-ring protein EBA01_10525 PF02107 Flagellar L-ring protein EBA01_10530 PF00460 Flagella basal body rod protein EBA01_10530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EBA01_10540 PF00460 Flagella basal body rod protein EBA01_10540 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EBA01_10545 PF00460 Flagella basal body rod protein EBA01_10545 PF07559 Flagellar basal body protein FlaE EBA01_10545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EBA01_10550 PF03963 Flagellar hook capping protein - N-terminal region EBA01_10555 PF00460 Flagella basal body rod protein EBA01_10555 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EBA01_10565 PF00072 Response regulator receiver domain EBA01_10565 PF01584 CheW-like domain EBA01_10585 PF13426 PAS domain EBA01_10585 PF00512 His Kinase A (phospho-acceptor) domain EBA01_10585 PF13188 PAS domain EBA01_10585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_10585 PF00989 PAS fold EBA01_10590 PF00563 EAL domain EBA01_10590 PF03707 Bacterial signalling protein N terminal repeat EBA01_10590 PF00990 Diguanylate cyclase, GGDEF domain EBA01_10595 PF07730 Histidine kinase EBA01_10595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_10600 PF03707 Bacterial signalling protein N terminal repeat EBA01_10600 PF00563 EAL domain EBA01_10600 PF00990 Diguanylate cyclase, GGDEF domain EBA01_10620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA01_10620 PF00672 HAMP domain EBA01_10620 PF12729 Four helix bundle sensory module for signal transduction EBA01_10625 PF04356 Protein of unknown function (DUF489) EBA01_10635 PF00293 NUDIX domain EBA01_10640 PF02617 ATP-dependent Clp protease adaptor protein ClpS EBA01_10645 PF00004 ATPase family associated with various cellular activities (AAA) EBA01_10645 PF02861 Clp amino terminal domain, pathogenicity island component EBA01_10645 PF10431 C-terminal, D2-small domain, of ClpB protein EBA01_10645 PF07724 AAA domain (Cdc48 subfamily) EBA01_10645 PF17871 AAA lid domain EBA01_10650 PF01176 Translation initiation factor 1A / IF-1 EBA01_10655 PF03588 Leucyl/phenylalanyl-tRNA protein transferase EBA01_10670 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA01_10675 PF01580 FtsK/SpoIIIE family EBA01_10675 PF09397 Ftsk gamma domain EBA01_10675 PF17854 FtsK alpha domain EBA01_10675 PF13491 4TM region of DNA translocase FtsK/SpoIIIE EBA01_10685 PF03548 Outer membrane lipoprotein carrier protein LolA EBA01_10700 PF00004 ATPase family associated with various cellular activities (AAA) EBA01_10700 PF12002 MgsA AAA+ ATPase C terminal EBA01_10700 PF16193 AAA C-terminal domain EBA01_10710 PF02537 CrcB-like protein, Camphor Resistance (CrcB) EBA01_10720 PF00654 Voltage gated chloride channel EBA01_10725 PF02803 Thiolase, C-terminal domain EBA01_10725 PF00108 Thiolase, N-terminal domain EBA01_10730 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EBA01_10730 PF00378 Enoyl-CoA hydratase/isomerase EBA01_10730 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EBA01_10740 PF00334 Nucleoside diphosphate kinase EBA01_10745 PF04055 Radical SAM superfamily EBA01_10755 PF13464 Domain of unknown function (DUF4115) EBA01_10765 PF13360 PQQ-like domain EBA01_10765 PF01011 PQQ enzyme repeat EBA01_10770 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EBA01_10770 PF01926 50S ribosome-binding GTPase EBA01_10775 PF00994 Probable molybdopterin binding domain EBA01_10775 PF03454 MoeA C-terminal region (domain IV) EBA01_10775 PF03453 MoeA N-terminal region (domain I and II) EBA01_10785 PF00899 ThiF family EBA01_10795 PF00665 Integrase core domain EBA01_10795 PF13936 Helix-turn-helix domain EBA01_10805 PF05598 Transposase domain (DUF772) EBA01_10805 PF01609 Transposase DDE domain EBA01_10825 PF03454 MoeA C-terminal region (domain IV) EBA01_10825 PF03453 MoeA N-terminal region (domain I and II) EBA01_10825 PF00994 Probable molybdopterin binding domain EBA01_10830 PF12804 MobA-like NTP transferase domain EBA01_10855 PF14824 Sirohaem biosynthesis protein central EBA01_10855 PF10414 Sirohaem synthase dimerisation region EBA01_10855 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EBA01_10895 PF05598 Transposase domain (DUF772) EBA01_10895 PF01609 Transposase DDE domain EBA01_10920 PF00990 Diguanylate cyclase, GGDEF domain EBA01_10920 PF08447 PAS fold EBA01_10920 PF08448 PAS fold EBA01_10920 PF00563 EAL domain EBA01_10925 PF12951 Passenger-associated-transport-repeat EBA01_10930 PF00196 Bacterial regulatory proteins, luxR family EBA01_10930 PF00072 Response regulator receiver domain EBA01_10935 PF13426 PAS domain EBA01_10935 PF00072 Response regulator receiver domain EBA01_10935 PF00512 His Kinase A (phospho-acceptor) domain EBA01_10935 PF08448 PAS fold EBA01_10935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_10945 PF00873 AcrB/AcrD/AcrF family EBA01_10950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EBA01_10960 PF03797 Autotransporter beta-domain EBA01_10960 PF00082 Subtilase family EBA01_10980 PF04717 Type VI secretion system, phage-baseplate injector EBA01_10980 PF16671 Actin cross-linking domain EBA01_10985 PF03377 TAL effector repeat EBA01_10990 PF03377 TAL effector repeat EBA01_10995 PF03377 TAL effector repeat EBA01_11015 PF00550 Phosphopantetheine attachment site EBA01_11015 PF00668 Condensation domain EBA01_11015 PF00975 Thioesterase domain EBA01_11015 PF13193 AMP-binding enzyme C-terminal domain EBA01_11015 PF00501 AMP-binding enzyme EBA01_11020 PF13340 Putative transposase of IS4/5 family (DUF4096) EBA01_11025 PF00501 AMP-binding enzyme EBA01_11025 PF13193 AMP-binding enzyme C-terminal domain EBA01_11025 PF00668 Condensation domain EBA01_11025 PF00550 Phosphopantetheine attachment site EBA01_11030 PF00550 Phosphopantetheine attachment site EBA01_11030 PF00668 Condensation domain EBA01_11030 PF13193 AMP-binding enzyme C-terminal domain EBA01_11030 PF00501 AMP-binding enzyme EBA01_11035 PF00550 Phosphopantetheine attachment site EBA01_11035 PF00668 Condensation domain EBA01_11035 PF13193 AMP-binding enzyme C-terminal domain EBA01_11035 PF00501 AMP-binding enzyme EBA01_11040 PF00550 Phosphopantetheine attachment site EBA01_11040 PF13193 AMP-binding enzyme C-terminal domain EBA01_11040 PF00668 Condensation domain EBA01_11040 PF00975 Thioesterase domain EBA01_11040 PF00501 AMP-binding enzyme EBA01_11045 PF00550 Phosphopantetheine attachment site EBA01_11045 PF00668 Condensation domain EBA01_11045 PF00501 AMP-binding enzyme EBA01_11045 PF13193 AMP-binding enzyme C-terminal domain EBA01_11045 PF00975 Thioesterase domain EBA01_11050 PF00501 AMP-binding enzyme EBA01_11050 PF00975 Thioesterase domain EBA01_11050 PF00550 Phosphopantetheine attachment site EBA01_11050 PF00975 Thioesterase domain EBA01_11050 PF00501 AMP-binding enzyme EBA01_11050 PF00668 Condensation domain EBA01_11050 PF13193 AMP-binding enzyme C-terminal domain EBA01_11050 PF13193 AMP-binding enzyme C-terminal domain EBA01_11050 PF00550 Phosphopantetheine attachment site EBA01_11050 PF00668 Condensation domain EBA01_11060 PF00195 Chalcone and stilbene synthases, N-terminal domain EBA01_11060 PF02797 Chalcone and stilbene synthases, C-terminal domain EBA01_11070 PF00378 Enoyl-CoA hydratase/isomerase EBA01_11075 PF00155 Aminotransferase class I and II EBA01_11080 PF00378 Enoyl-CoA hydratase/isomerase EBA01_11085 PF00005 ABC transporter EBA01_11085 PF00664 ABC transporter transmembrane region EBA01_11090 PF03621 MbtH-like protein EBA01_11095 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain EBA01_11095 PF12706 Beta-lactamase superfamily domain EBA01_11110 PF01609 Transposase DDE domain EBA01_11110 PF05598 Transposase domain (DUF772) EBA01_11125 PF00873 AcrB/AcrD/AcrF family EBA01_11130 PF00529 HlyD membrane-fusion protein of T1SS EBA01_11130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EBA01_11180 PF00486 Transcriptional regulatory protein, C terminal EBA01_11180 PF00072 Response regulator receiver domain EBA01_11185 PF00034 Cytochrome c EBA01_11185 PF03150 Di-haem cytochrome c peroxidase EBA01_11190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_11190 PF00512 His Kinase A (phospho-acceptor) domain EBA01_11195 PF03466 LysR substrate binding domain EBA01_11195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA01_11215 PF00069 Protein kinase domain EBA01_11215 PF03793 PASTA domain EBA01_11255 PF04717 Type VI secretion system, phage-baseplate injector EBA01_11255 PF16671 Actin cross-linking domain EBA01_11275 PF05598 Transposase domain (DUF772) EBA01_11285 PF05598 Transposase domain (DUF772) EBA01_11285 PF01609 Transposase DDE domain EBA01_11295 PF07724 AAA domain (Cdc48 subfamily) EBA01_11295 PF10431 C-terminal, D2-small domain, of ClpB protein EBA01_11295 PF17871 AAA lid domain EBA01_11295 PF00004 ATPase family associated with various cellular activities (AAA) EBA01_11320 PF05638 Type VI secretion system effector, Hcp EBA01_11370 PF01609 Transposase DDE domain EBA01_11370 PF05598 Transposase domain (DUF772) EBA01_11380 PF01106 NifU-like domain EBA01_11385 PF01329 Pterin 4 alpha carbinolamine dehydratase EBA01_11400 PF11737 Protein of unknown function (DUF3300) EBA01_11405 PF01479 S4 domain EBA01_11405 PF00849 RNA pseudouridylate synthase EBA01_11410 PF12111 Polyribonucleotide phosphorylase C terminal EBA01_11410 PF10150 Ribonuclease E/G family EBA01_11410 PF00575 S1 RNA binding domain EBA01_11420 PF00196 Bacterial regulatory proteins, luxR family EBA01_11420 PF00072 Response regulator receiver domain EBA01_11435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EBA01_11445 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EBA01_11445 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EBA01_11445 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EBA01_11455 PF17837 4'-phosphopantetheinyl transferase N-terminal domain EBA01_11455 PF01648 4'-phosphopantetheinyl transferase superfamily EBA01_11480 PF01066 CDP-alcohol phosphatidyltransferase EBA01_11485 PF08459 UvrC Helix-hairpin-helix N-terminal EBA01_11485 PF01541 GIY-YIG catalytic domain EBA01_11485 PF02151 UvrB/uvrC motif EBA01_11495 PF01451 Low molecular weight phosphotyrosine protein phosphatase EBA01_11500 PF02348 Cytidylyltransferase EBA01_11505 PF02606 Tetraacyldisaccharide-1-P 4'-kinase EBA01_11510 PF00005 ABC transporter EBA01_11510 PF00664 ABC transporter transmembrane region EBA01_11520 PF01618 MotA/TolQ/ExbB proton channel family EBA01_11525 PF03772 Competence protein EBA01_11525 PF00753 Metallo-beta-lactamase superfamily EBA01_11540 PF00005 ABC transporter EBA01_11545 PF02687 FtsX-like permease family EBA01_11545 PF12704 MacB-like periplasmic core domain EBA01_11555 PF03937 Flavinator of succinate dehydrogenase EBA01_11560 PF13085 2Fe-2S iron-sulfur cluster binding domain EBA01_11570 PF00890 FAD binding domain EBA01_11570 PF02910 Fumarate reductase flavoprotein C-term EBA01_11575 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EBA01_11580 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EBA01_11590 PF01571 Aminomethyltransferase folate-binding domain EBA01_11600 PF00005 ABC transporter EBA01_11600 PF17912 MalK OB fold domain EBA01_11605 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EBA01_11605 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EBA01_11610 PF02685 Glucokinase EBA01_11615 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EBA01_11620 PF00920 Dehydratase family EBA01_11625 PF01081 KDPG and KHG aldolase EBA01_11660 PF00034 Cytochrome c EBA01_11705 PF00072 Response regulator receiver domain EBA01_11705 PF00512 His Kinase A (phospho-acceptor) domain EBA01_11705 PF09308 LuxQ, periplasmic EBA01_11705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_11720 PF00575 S1 RNA binding domain EBA01_11720 PF09371 Tex-like protein N-terminal domain EBA01_11720 PF17674 HHH domain EBA01_11720 PF16921 Tex protein YqgF-like domain EBA01_11730 PF00355 Rieske [2Fe-2S] domain EBA01_11730 PF01266 FAD dependent oxidoreductase EBA01_11745 PF00561 alpha/beta hydrolase fold EBA01_11755 PF01066 CDP-alcohol phosphatidyltransferase EBA01_11775 PF03618 Kinase/pyrophosphorylase EBA01_11780 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain EBA01_11780 PF00391 PEP-utilising enzyme, mobile domain EBA01_11780 PF02896 PEP-utilising enzyme, TIM barrel domain EBA01_11785 PF05552 Conserved TM helix EBA01_11785 PF00924 Mechanosensitive ion channel EBA01_11790 PF00929 Exonuclease EBA01_11795 PF14437 MafB19-like deaminase EBA01_11800 PF01325 Iron dependent repressor, N-terminal DNA binding domain EBA01_11800 PF02742 Iron dependent repressor, metal binding and dimerisation domain EBA01_11805 PF01566 Natural resistance-associated macrophage protein EBA01_11835 PF03466 LysR substrate binding domain EBA01_11835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA01_11840 PF03601 Conserved hypothetical protein 698 EBA01_11860 PF03466 LysR substrate binding domain EBA01_11860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA01_11865 PF00361 Proton-conducting membrane transporter EBA01_11865 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EBA01_11865 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus EBA01_11870 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) EBA01_11875 PF02540 NAD synthase EBA01_11875 PF00958 GMP synthase C terminal domain EBA01_11875 PF00117 Glutamine amidotransferase class-I EBA01_11880 PF00571 CBS domain EBA01_11880 PF00478 IMP dehydrogenase / GMP reductase domain EBA01_11885 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EBA01_11885 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EBA01_11900 PF00483 Nucleotidyl transferase EBA01_11905 PF02719 Polysaccharide biosynthesis protein EBA01_11910 PF00953 Glycosyl transferase family 4 EBA01_11915 PF18073 Rubredoxin metal binding domain EBA01_11925 PF00216 Bacterial DNA-binding protein EBA01_11930 PF00575 S1 RNA binding domain EBA01_11935 PF02224 Cytidylate kinase EBA01_11940 PF00444 Ribosomal protein L36 EBA01_11950 PF04371 Porphyromonas-type peptidyl-arginine deiminase EBA01_11960 PF00795 Carbon-nitrogen hydrolase EBA01_11985 PF00528 Binding-protein-dependent transport system inner membrane component EBA01_11990 PF00528 Binding-protein-dependent transport system inner membrane component EBA01_12010 PF00356 Bacterial regulatory proteins, lacI family EBA01_12020 PF03795 YCII-related domain EBA01_12025 PF02616 Segregation and condensation protein ScpA EBA01_12030 PF04079 Segregation and condensation complex subunit ScpB EBA01_12035 PF00849 RNA pseudouridylate synthase EBA01_12035 PF01479 S4 domain EBA01_12050 PF00795 Carbon-nitrogen hydrolase EBA01_12055 PF00155 Aminotransferase class I and II EBA01_12060 PF00005 ABC transporter EBA01_12065 PF03379 CcmB protein EBA01_12070 PF01578 Cytochrome C assembly protein EBA01_12080 PF03100 CcmE EBA01_12085 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal EBA01_12085 PF01578 Cytochrome C assembly protein EBA01_12090 PF08534 Redoxin EBA01_12095 PF03918 Cytochrome C biogenesis protein EBA01_12105 PF00561 alpha/beta hydrolase fold EBA01_12110 PF00313 'Cold-shock' DNA-binding domain EBA01_12120 PF00005 ABC transporter EBA01_12120 PF00664 ABC transporter transmembrane region EBA01_12125 PF00664 ABC transporter transmembrane region EBA01_12125 PF00005 ABC transporter EBA01_12135 PF01654 Cytochrome bd terminal oxidase subunit I EBA01_12165 PF02129 X-Pro dipeptidyl-peptidase (S15 family) EBA01_12165 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain EBA01_12170 PF00171 Aldehyde dehydrogenase family EBA01_12175 PF01472 PUA domain EBA01_12175 PF00696 Amino acid kinase family EBA01_12190 PF00206 Lyase EBA01_12195 PF01118 Semialdehyde dehydrogenase, NAD binding domain EBA01_12205 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase EBA01_12205 PF00696 Amino acid kinase family EBA01_12210 PF07687 Peptidase dimerisation domain EBA01_12210 PF01546 Peptidase family M20/M25/M40 EBA01_12215 PF00764 Arginosuccinate synthase EBA01_12220 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EBA01_12220 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EBA01_12230 PF09190 DALR domain EBA01_12230 PF01406 tRNA synthetases class I (C) catalytic domain EBA01_12235 PF02657 Fe-S metabolism associated domain EBA01_12255 PF01809 Putative membrane protein insertion efficiency factor EBA01_12260 PF01979 Amidohydrolase family EBA01_12265 PF08460 Bacterial SH3 domain EBA01_12265 PF01551 Peptidase family M23 EBA01_12275 PF05985 Ethanolamine ammonia-lyase light chain (EutC) EBA01_12290 PF01095 Pectinesterase EBA01_12295 PF00665 Integrase core domain EBA01_12295 PF13936 Helix-turn-helix domain EBA01_12300 PF00295 Glycosyl hydrolases family 28 EBA01_12315 PF13419 Haloacid dehalogenase-like hydrolase EBA01_12325 PF01979 Amidohydrolase family EBA01_12340 PF09285 Elongation factor P, C-terminal EBA01_12340 PF08207 Elongation factor P (EF-P) KOW-like domain EBA01_12340 PF01132 Elongation factor P (EF-P) OB domain EBA01_12345 PF04055 Radical SAM superfamily EBA01_12350 PF03707 Bacterial signalling protein N terminal repeat EBA01_12350 PF00990 Diguanylate cyclase, GGDEF domain EBA01_12350 PF00563 EAL domain EBA01_12350 PF13188 PAS domain EBA01_12360 PF00588 SpoU rRNA Methylase family EBA01_12365 PF00459 Inositol monophosphatase family EBA01_12370 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EBA01_12370 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EBA01_12375 PF00545 ribonuclease EBA01_12400 PF00271 Helicase conserved C-terminal domain EBA01_12400 PF00270 DEAD/DEAH box helicase EBA01_12400 PF03880 DbpA RNA binding domain EBA01_12405 PF00156 Phosphoribosyl transferase domain EBA01_12410 PF02696 Uncharacterized ACR, YdiU/UPF0061 family EBA01_12420 PF02798 Glutathione S-transferase, N-terminal domain EBA01_12420 PF14497 Glutathione S-transferase, C-terminal domain EBA01_12425 PF00313 'Cold-shock' DNA-binding domain EBA01_12430 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 EBA01_12435 PF07152 YaeQ protein EBA01_12445 PF00498 FHA domain EBA01_12445 PF00563 EAL domain EBA01_12445 PF00990 Diguanylate cyclase, GGDEF domain EBA01_12450 PF01435 Peptidase family M48 EBA01_12455 PF00749 tRNA synthetases class I (E and Q), catalytic domain EBA01_12460 PF00106 short chain dehydrogenase EBA01_12465 PF07879 PHB/PHA accumulation regulator DNA-binding domain EBA01_12465 PF05233 PHB accumulation regulatory domain EBA01_12480 PF01119 DNA mismatch repair protein, C-terminal domain EBA01_12480 PF08676 MutL C terminal dimerisation domain EBA01_12485 PF01520 N-acetylmuramoyl-L-alanine amidase EBA01_12485 PF11741 AMIN domain EBA01_12490 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE EBA01_12495 PF01256 Carbohydrate kinase EBA01_12495 PF03853 YjeF-related protein N-terminus EBA01_12500 PF08331 Domain of unknown function (DUF1730) EBA01_12505 PF13742 OB-fold nucleic acid binding domain EBA01_12505 PF02601 Exonuclease VII, large subunit EBA01_12520 PF05598 Transposase domain (DUF772) EBA01_12520 PF01609 Transposase DDE domain EBA01_12530 PF03781 Sulfatase-modifying factor enzyme 1 EBA01_12545 PF01612 3'-5' exonuclease EBA01_12545 PF00570 HRDC domain EBA01_12580 PF01584 CheW-like domain EBA01_12585 PF00672 HAMP domain EBA01_12585 PF02743 Cache domain EBA01_12585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA01_12615 PF04386 Stringent starvation protein B EBA01_12620 PF00043 Glutathione S-transferase, C-terminal domain EBA01_12620 PF02798 Glutathione S-transferase, N-terminal domain EBA01_12625 PF02167 Cytochrome C1 family EBA01_12630 PF00032 Cytochrome b(C-terminal)/b6/petD EBA01_12630 PF00033 Cytochrome b/b6/petB EBA01_12635 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal EBA01_12635 PF00355 Rieske [2Fe-2S] domain EBA01_12645 PF01464 Transglycosylase SLT domain EBA01_12665 PF04055 Radical SAM superfamily EBA01_12665 PF01938 TRAM domain EBA01_12665 PF00919 Uncharacterized protein family UPF0004 EBA01_12670 PF02562 PhoH-like protein EBA01_12680 PF02130 Uncharacterized protein family UPF0054 EBA01_12690 PF00571 CBS domain EBA01_12690 PF03471 Transporter associated domain EBA01_12705 PF00171 Aldehyde dehydrogenase family EBA01_12710 PF00528 Binding-protein-dependent transport system inner membrane component EBA01_12715 PF00528 Binding-protein-dependent transport system inner membrane component EBA01_12725 PF00005 ABC transporter EBA01_12725 PF08402 TOBE domain EBA01_12730 PF02321 Outer membrane efflux protein EBA01_12735 PF07690 Major Facilitator Superfamily EBA01_12740 PF13533 Biotin-lipoyl like EBA01_12755 PF05598 Transposase domain (DUF772) EBA01_12755 PF01609 Transposase DDE domain EBA01_12770 PF00120 Glutamine synthetase, catalytic domain EBA01_12780 PF00120 Glutamine synthetase, catalytic domain EBA01_12785 PF01266 FAD dependent oxidoreductase EBA01_12790 PF00072 Response regulator receiver domain EBA01_12790 PF00990 Diguanylate cyclase, GGDEF domain EBA01_12795 PF00083 Sugar (and other) transporter EBA01_12795 PF07690 Major Facilitator Superfamily EBA01_12805 PF00384 Molybdopterin oxidoreductase EBA01_12810 PF02634 FdhD/NarQ family EBA01_12815 PF07690 Major Facilitator Superfamily EBA01_12825 PF00202 Aminotransferase class-III EBA01_12830 PF00005 ABC transporter EBA01_12840 PF04286 Protein of unknown function (DUF445) EBA01_12845 PF00672 HAMP domain EBA01_12845 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EBA01_12845 PF00512 His Kinase A (phospho-acceptor) domain EBA01_12845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_12845 PF01627 Hpt domain EBA01_12845 PF00072 Response regulator receiver domain EBA01_12855 PF05598 Transposase domain (DUF772) EBA01_12855 PF01609 Transposase DDE domain EBA01_12860 PF05088 Bacterial NAD-glutamate dehydrogenase EBA01_12870 PF00529 HlyD membrane-fusion protein of T1SS EBA01_12870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EBA01_12875 PF00873 AcrB/AcrD/AcrF family EBA01_12890 PF00356 Bacterial regulatory proteins, lacI family EBA01_12895 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EBA01_12895 PF05524 PEP-utilising enzyme, N-terminal EBA01_12895 PF00381 PTS HPr component phosphorylation site EBA01_12895 PF02896 PEP-utilising enzyme, TIM barrel domain EBA01_12895 PF00391 PEP-utilising enzyme, mobile domain EBA01_12900 PF00294 pfkB family carbohydrate kinase EBA01_12905 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EBA01_12915 PF16671 Actin cross-linking domain EBA01_12915 PF04717 Type VI secretion system, phage-baseplate injector EBA01_12930 PF00665 Integrase core domain EBA01_12930 PF13936 Helix-turn-helix domain EBA01_12945 PF05598 Transposase domain (DUF772) EBA01_12950 PF05598 Transposase domain (DUF772) EBA01_12970 PF07549 SecD/SecF GG Motif EBA01_12970 PF02355 Protein export membrane protein EBA01_12975 PF02355 Protein export membrane protein EBA01_12975 PF13721 SecD export protein N-terminal TM region EBA01_12975 PF07549 SecD/SecF GG Motif EBA01_12980 PF02699 Preprotein translocase subunit EBA01_12985 PF01702 Queuine tRNA-ribosyltransferase EBA01_12990 PF02547 Queuosine biosynthesis protein EBA01_13055 PF00037 4Fe-4S binding domain EBA01_13070 PF01467 Cytidylyltransferase-like EBA01_13080 PF00183 Hsp90 protein EBA01_13080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_13090 PF05598 Transposase domain (DUF772) EBA01_13115 PF04616 Glycosyl hydrolases family 43 EBA01_13120 PF07532 Bacterial Ig-like domain (group 4) EBA01_13125 PF07715 TonB-dependent Receptor Plug Domain EBA01_13125 PF00593 TonB dependent receptor EBA01_13140 PF09286 Pro-kumamolisin, activation domain EBA01_13140 PF00082 Subtilase family EBA01_13175 PF13520 Amino acid permease EBA01_13190 PF01321 Creatinase/Prolidase N-terminal domain EBA01_13190 PF00557 Metallopeptidase family M24 EBA01_13195 PF00171 Aldehyde dehydrogenase family EBA01_13200 PF00701 Dihydrodipicolinate synthetase family EBA01_13205 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA01_13205 PF04324 BFD-like [2Fe-2S] binding domain EBA01_13215 PF01266 FAD dependent oxidoreductase EBA01_13220 PF05544 Proline racemase EBA01_13230 PF02881 SRP54-type protein, helical bundle domain EBA01_13230 PF00448 SRP54-type protein, GTPase domain EBA01_13245 PF00633 Helix-hairpin-helix motif EBA01_13245 PF00730 HhH-GPD superfamily base excision DNA repair protein EBA01_13245 PF14815 NUDIX domain EBA01_13245 PF10576 Iron-sulfur binding domain of endonuclease III EBA01_13250 PF04362 Bacterial Fe(2+) trafficking EBA01_13255 PF00072 Response regulator receiver domain EBA01_13255 PF13426 PAS domain EBA01_13255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_13285 PF08212 Lipocalin-like domain EBA01_13295 PF12806 Acetyl-CoA dehydrogenase C-terminal like EBA01_13295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EBA01_13295 PF02770 Acyl-CoA dehydrogenase, middle domain EBA01_13295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EBA01_13305 PF13292 1-deoxy-D-xylulose-5-phosphate synthase EBA01_13305 PF02780 Transketolase, C-terminal domain EBA01_13305 PF02779 Transketolase, pyrimidine binding domain EBA01_13325 PF03808 Glycosyl transferase WecB/TagA/CpsF family EBA01_13340 PF14667 Polysaccharide biosynthesis C-terminal domain EBA01_13350 PF00534 Glycosyl transferases group 1 EBA01_13350 PF13439 Glycosyltransferase Family 4 EBA01_13370 PF02397 Bacterial sugar transferase EBA01_13390 PF13411 MerR HTH family regulatory protein EBA01_13395 PF00216 Bacterial DNA-binding protein EBA01_13400 PF03483 B3/4 domain EBA01_13400 PF03484 tRNA synthetase B5 domain EBA01_13400 PF03147 Ferredoxin-fold anticodon binding domain EBA01_13400 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EBA01_13400 PF01588 Putative tRNA binding domain EBA01_13405 PF01409 tRNA synthetases class II core domain (F) EBA01_13405 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EBA01_13410 PF00453 Ribosomal protein L20 EBA01_13415 PF01632 Ribosomal protein L35 EBA01_13420 PF05198 Translation initiation factor IF-3, N-terminal domain EBA01_13420 PF00707 Translation initiation factor IF-3, C-terminal domain EBA01_13425 PF03129 Anticodon binding domain EBA01_13425 PF02824 TGS domain EBA01_13425 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EBA01_13425 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EBA01_13440 PF03989 DNA gyrase C-terminal domain, beta-propeller EBA01_13440 PF00521 DNA gyrase/topoisomerase IV, subunit A EBA01_13445 PF01008 Initiation factor 2 subunit family EBA01_13460 PF00152 tRNA synthetases class II (D, K and N) EBA01_13465 PF01653 NAD-dependent DNA ligase adenylation domain EBA01_13465 PF00533 BRCA1 C Terminus (BRCT) domain EBA01_13465 PF03119 NAD-dependent DNA ligase C4 zinc finger domain EBA01_13465 PF12826 Helix-hairpin-helix motif EBA01_13465 PF03120 NAD-dependent DNA ligase OB-fold domain EBA01_13470 PF00155 Aminotransferase class I and II EBA01_13475 PF04354 ZipA, C-terminal FtsZ-binding domain EBA01_13480 PF02463 RecF/RecN/SMC N terminal domain EBA01_13485 PF01281 Ribosomal protein L9, N-terminal domain EBA01_13485 PF03948 Ribosomal protein L9, C-terminal domain EBA01_13490 PF01084 Ribosomal protein S18 EBA01_13495 PF01250 Ribosomal protein S6 EBA01_13500 PF01521 Iron-sulphur cluster biosynthesis EBA01_13510 PF00152 tRNA synthetases class II (D, K and N) EBA01_13510 PF01336 OB-fold nucleic acid binding domain EBA01_13535 PF00484 Carbonic anhydrase EBA01_13540 PF06052 3-hydroxyanthranilic acid dioxygenase EBA01_13560 PF00266 Aminotransferase class-V EBA01_13565 PF01494 FAD binding domain EBA01_13570 PF00929 Exonuclease EBA01_13570 PF08411 Exonuclease C-terminal EBA01_13580 PF00248 Aldo/keto reductase family EBA01_13595 PF01513 ATP-NAD kinase EBA01_13610 PF01170 Putative RNA methylase family UPF0020 EBA01_13610 PF02926 THUMP domain EBA01_13610 PF10672 S-adenosylmethionine-dependent methyltransferase EBA01_13650 PF00581 Rhodanese-like domain EBA01_13655 PF00293 NUDIX domain EBA01_13660 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EBA01_13660 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EBA01_13665 PF00378 Enoyl-CoA hydratase/isomerase EBA01_13675 PF10576 Iron-sulfur binding domain of endonuclease III EBA01_13675 PF00633 Helix-hairpin-helix motif EBA01_13675 PF00730 HhH-GPD superfamily base excision DNA repair protein EBA01_13680 PF00916 Sulfate permease family EBA01_13680 PF01740 STAS domain EBA01_13685 PF00484 Carbonic anhydrase EBA01_13700 PF12849 PBP superfamily domain EBA01_13705 PF12849 PBP superfamily domain EBA01_13710 PF00528 Binding-protein-dependent transport system inner membrane component EBA01_13715 PF00528 Binding-protein-dependent transport system inner membrane component EBA01_13720 PF00005 ABC transporter EBA01_13725 PF01895 PhoU domain EBA01_13735 PF00929 Exonuclease EBA01_13745 PF08032 RNA 2'-O ribose methyltransferase substrate binding EBA01_13745 PF00588 SpoU rRNA Methylase family EBA01_13760 PF17876 Cold shock domain EBA01_13760 PF08461 Ribonuclease R winged-helix domain EBA01_13760 PF08206 Ribonuclease B OB domain EBA01_13760 PF00773 RNB domain EBA01_13760 PF00575 S1 RNA binding domain EBA01_13790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EBA01_13790 PF02770 Acyl-CoA dehydrogenase, middle domain EBA01_13790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EBA01_13795 PF01209 ubiE/COQ5 methyltransferase family EBA01_13800 PF00809 Pterin binding enzyme EBA01_13800 PF02574 Homocysteine S-methyltransferase EBA01_13805 PF02965 Vitamin B12 dependent methionine synthase, activation domain EBA01_13805 PF00809 Pterin binding enzyme EBA01_13805 PF02574 Homocysteine S-methyltransferase EBA01_13805 PF02607 B12 binding domain EBA01_13805 PF02310 B12 binding domain EBA01_13815 PF00294 pfkB family carbohydrate kinase EBA01_13820 PF07690 Major Facilitator Superfamily EBA01_13840 PF04102 SlyX EBA01_13845 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EBA01_13845 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EBA01_13845 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EBA01_13850 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EBA01_13850 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EBA01_13855 PF00255 Glutathione peroxidase EBA01_13865 PF00392 Bacterial regulatory proteins, gntR family EBA01_13870 PF00005 ABC transporter EBA01_13900 PF00206 Lyase EBA01_13900 PF10415 Fumarase C C-terminus EBA01_13910 PF05598 Transposase domain (DUF772) EBA01_13910 PF01609 Transposase DDE domain EBA01_13925 PF00206 Lyase EBA01_13925 PF08328 Adenylosuccinate lyase C-terminal EBA01_13940 PF08007 Cupin superfamily protein EBA01_13950 PF02779 Transketolase, pyrimidine binding domain EBA01_13950 PF00676 Dehydrogenase E1 component EBA01_13950 PF16078 2-oxoglutarate dehydrogenase N-terminus EBA01_13950 PF16870 2-oxoglutarate dehydrogenase C-terminal EBA01_13955 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EBA01_13955 PF02817 e3 binding domain EBA01_13955 PF00364 Biotin-requiring enzyme EBA01_13960 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA01_13960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EBA01_13965 PF03641 Possible lysine decarboxylase EBA01_13970 PF01205 Uncharacterized protein family UPF0029 EBA01_13975 PF00005 ABC transporter EBA01_13975 PF00664 ABC transporter transmembrane region EBA01_14005 PF08543 Phosphomethylpyrimidine kinase EBA01_14015 PF00226 DnaJ domain EBA01_14015 PF00684 DnaJ central domain EBA01_14015 PF01556 DnaJ C terminal domain EBA01_14020 PF00012 Hsp70 protein EBA01_14025 PF01025 GrpE EBA01_14030 PF01628 HrcA protein C terminal domain EBA01_14030 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding EBA01_14035 PF02463 RecF/RecN/SMC N terminal domain EBA01_14040 PF01475 Ferric uptake regulator family EBA01_14045 PF04355 SmpA / OmlA family EBA01_14055 PF03658 RnfH family Ubiquitin EBA01_14065 PF01668 SmpB protein EBA01_14070 PF00082 Subtilase family EBA01_14090 PF05598 Transposase domain (DUF772) EBA01_14090 PF01609 Transposase DDE domain EBA01_14095 PF05598 Transposase domain (DUF772) EBA01_14135 PF01053 Cys/Met metabolism PLP-dependent enzyme EBA01_14145 PF07722 Peptidase C26 EBA01_14150 PF01810 LysE type translocator EBA01_14155 PF04204 Homoserine O-succinyltransferase EBA01_14160 PF00120 Glutamine synthetase, catalytic domain EBA01_14170 PF05598 Transposase domain (DUF772) EBA01_14175 PF05598 Transposase domain (DUF772) EBA01_14205 PF08448 PAS fold EBA01_14205 PF00990 Diguanylate cyclase, GGDEF domain EBA01_14220 PF05736 OprF membrane domain EBA01_14220 PF00691 OmpA family EBA01_14240 PF00875 DNA photolyase EBA01_14240 PF03441 FAD binding domain of DNA photolyase EBA01_14245 PF03796 DnaB-like helicase C terminal domain EBA01_14245 PF00772 DnaB-like helicase N terminal domain EBA01_14250 PF03358 NADPH-dependent FMN reductase EBA01_14255 PF13537 Glutamine amidotransferase domain EBA01_14255 PF00733 Asparagine synthase EBA01_14260 PF13417 Glutathione S-transferase, N-terminal domain EBA01_14285 PF01026 TatD related DNase EBA01_14290 PF00899 ThiF family EBA01_14305 PF00313 'Cold-shock' DNA-binding domain EBA01_14330 PF00672 HAMP domain EBA01_14330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA01_14330 PF02203 Tar ligand binding domain homologue EBA01_14335 PF05598 Transposase domain (DUF772) EBA01_14345 PF01609 Transposase DDE domain EBA01_14345 PF05598 Transposase domain (DUF772) EBA01_14360 PF01609 Transposase DDE domain EBA01_14360 PF05598 Transposase domain (DUF772) EBA01_14375 PF05683 Fumarase C-terminus EBA01_14375 PF05681 Fumarate hydratase (Fumerase) EBA01_14385 PF00005 ABC transporter EBA01_14390 PF00970 Oxidoreductase FAD-binding domain EBA01_14390 PF00175 Oxidoreductase NAD-binding domain EBA01_14395 PF00255 Glutathione peroxidase EBA01_14425 PF08281 Sigma-70, region 4 EBA01_14425 PF04542 Sigma-70 region 2 EBA01_14435 PF12802 MarR family EBA01_14470 PF14310 Fibronectin type III-like domain EBA01_14470 PF00933 Glycosyl hydrolase family 3 N terminal domain EBA01_14470 PF01915 Glycosyl hydrolase family 3 C-terminal domain EBA01_14495 PF07690 Major Facilitator Superfamily EBA01_14500 PF00529 HlyD membrane-fusion protein of T1SS EBA01_14500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EBA01_14505 PF02321 Outer membrane efflux protein EBA01_14515 PF12833 Helix-turn-helix domain EBA01_14520 PF00521 DNA gyrase/topoisomerase IV, subunit A EBA01_14520 PF03989 DNA gyrase C-terminal domain, beta-propeller EBA01_14530 PF00210 Ferritin-like domain EBA01_14535 PF01804 Penicillin amidase EBA01_14545 PF07715 TonB-dependent Receptor Plug Domain EBA01_14545 PF00593 TonB dependent receptor EBA01_14555 PF00733 Asparagine synthase EBA01_14555 PF13537 Glutamine amidotransferase domain EBA01_14560 PF01546 Peptidase family M20/M25/M40 EBA01_14560 PF07687 Peptidase dimerisation domain EBA01_14570 PF03960 ArsC family EBA01_14580 PF00132 Bacterial transferase hexapeptide (six repeats) EBA01_14580 PF14602 Hexapeptide repeat of succinyl-transferase EBA01_14580 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal EBA01_14585 PF08335 GlnD PII-uridylyltransferase EBA01_14585 PF01909 Nucleotidyltransferase domain EBA01_14585 PF01966 HD domain EBA01_14590 PF00557 Metallopeptidase family M24 EBA01_14625 PF00318 Ribosomal protein S2 EBA01_14630 PF00889 Elongation factor TS EBA01_14640 PF00696 Amino acid kinase family EBA01_14645 PF01765 Ribosome recycling factor EBA01_14650 PF01255 Putative undecaprenyl diphosphate synthase EBA01_14660 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase EBA01_14660 PF13288 DXP reductoisomerase C-terminal domain EBA01_14660 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain EBA01_14665 PF17820 PDZ domain EBA01_14665 PF02163 Peptidase family M50 EBA01_14670 PF01103 Surface antigen EBA01_14670 PF07244 Surface antigen variable number repeat EBA01_14680 PF00132 Bacterial transferase hexapeptide (six repeats) EBA01_14680 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD EBA01_14685 PF07977 FabA-like domain EBA01_14690 PF00132 Bacterial transferase hexapeptide (six repeats) EBA01_14690 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 EBA01_14695 PF02684 Lipid-A-disaccharide synthetase EBA01_14700 PF01351 Ribonuclease HII EBA01_14705 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EBA01_14705 PF01336 OB-fold nucleic acid binding domain EBA01_14705 PF02811 PHP domain EBA01_14705 PF14579 Helix-hairpin-helix motif EBA01_14705 PF07733 Bacterial DNA polymerase III alpha NTPase domain EBA01_14710 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit EBA01_14785 PF02592 Putative vitamin uptake transporter EBA01_14800 PF02574 Homocysteine S-methyltransferase EBA01_14805 PF00324 Amino acid permease EBA01_14810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EBA01_14820 PF09334 tRNA synthetases class I (M) EBA01_14820 PF01588 Putative tRNA binding domain EBA01_14830 PF04060 Putative Fe-S cluster EBA01_14850 PF04542 Sigma-70 region 2 EBA01_14850 PF04545 Sigma-70, region 4 EBA01_14895 PF01042 Endoribonuclease L-PSP EBA01_14905 PF09924 Uncharacterised conserved protein (DUF2156) EBA01_14905 PF03706 Lysylphosphatidylglycerol synthase TM region EBA01_14945 PF07690 Major Facilitator Superfamily EBA01_14950 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EBA01_14965 PF08274 PhnA Zinc-Ribbon EBA01_14965 PF03831 PhnA domain EBA01_14975 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EBA01_15010 PF12680 SnoaL-like domain EBA01_15010 PF08281 Sigma-70, region 4 EBA01_15010 PF04542 Sigma-70 region 2 EBA01_15020 PF01258 Prokaryotic dksA/traR C4-type zinc finger EBA01_15030 PF07043 Protein of unknown function (DUF1328) EBA01_15035 PF01863 Protein of unknown function DUF45 EBA01_15045 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EBA01_15045 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EBA01_15050 PF03797 Autotransporter beta-domain EBA01_15050 PF00082 Subtilase family EBA01_15050 PF12951 Passenger-associated-transport-repeat EBA01_15055 PF00108 Thiolase, N-terminal domain EBA01_15055 PF02803 Thiolase, C-terminal domain EBA01_15070 PF00990 Diguanylate cyclase, GGDEF domain EBA01_15070 PF00072 Response regulator receiver domain EBA01_15085 PF04679 ATP dependent DNA ligase C terminal region EBA01_15085 PF01068 ATP dependent DNA ligase domain EBA01_15085 PF04675 DNA ligase N terminus EBA01_15095 PF04675 DNA ligase N terminus EBA01_15095 PF01068 ATP dependent DNA ligase domain EBA01_15095 PF04679 ATP dependent DNA ligase C terminal region EBA01_15100 PF00271 Helicase conserved C-terminal domain EBA01_15100 PF00270 DEAD/DEAH box helicase EBA01_15100 PF08494 DEAD/H associated EBA01_15120 PF00313 'Cold-shock' DNA-binding domain EBA01_15125 PF01048 Phosphorylase superfamily EBA01_15135 PF00933 Glycosyl hydrolase family 3 N terminal domain EBA01_15140 PF04244 Deoxyribodipyrimidine photo-lyase-related protein EBA01_15145 PF01593 Flavin containing amine oxidoreductase EBA01_15160 PF05958 tRNA (Uracil-5-)-methyltransferase EBA01_15170 PF11967 Recombination protein O N terminal EBA01_15170 PF02565 Recombination protein O C terminal EBA01_15175 PF01926 50S ribosome-binding GTPase EBA01_15175 PF07650 KH domain EBA01_15180 PF00035 Double-stranded RNA binding motif EBA01_15180 PF14622 Ribonuclease-III-like EBA01_15190 PF10502 Signal peptidase, peptidase S26 EBA01_15195 PF06421 GTP-binding protein LepA C-terminus EBA01_15195 PF00009 Elongation factor Tu GTP binding domain EBA01_15195 PF03144 Elongation factor Tu domain 2 EBA01_15195 PF00679 Elongation factor G C-terminus EBA01_15200 PF13180 PDZ domain EBA01_15210 PF04542 Sigma-70 region 2 EBA01_15210 PF08281 Sigma-70, region 4 EBA01_15215 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EBA01_15215 PF00378 Enoyl-CoA hydratase/isomerase EBA01_15215 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EBA01_15220 PF01545 Cation efflux family EBA01_15225 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EBA01_15225 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EBA01_15230 PF00378 Enoyl-CoA hydratase/isomerase EBA01_15230 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EBA01_15230 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EBA01_15235 PF00378 Enoyl-CoA hydratase/isomerase EBA01_15240 PF02770 Acyl-CoA dehydrogenase, middle domain EBA01_15240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EBA01_15240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EBA01_15245 PF00171 Aldehyde dehydrogenase family EBA01_15250 PF01381 Helix-turn-helix EBA01_15250 PF09856 Predicted transcriptional regulator (DUF2083) EBA01_15250 PF06114 IrrE N-terminal-like domain EBA01_15265 PF05598 Transposase domain (DUF772) EBA01_15290 PF00072 Response regulator receiver domain EBA01_15290 PF01627 Hpt domain EBA01_15290 PF00512 His Kinase A (phospho-acceptor) domain EBA01_15290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_15290 PF00672 HAMP domain EBA01_15290 PF17149 Periplasmic sensor domain found in signal transduction proteins EBA01_15300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_15300 PF00072 Response regulator receiver domain EBA01_15300 PF00672 HAMP domain EBA01_15300 PF17149 Periplasmic sensor domain found in signal transduction proteins EBA01_15300 PF00512 His Kinase A (phospho-acceptor) domain EBA01_15300 PF01627 Hpt domain EBA01_15305 PF00512 His Kinase A (phospho-acceptor) domain EBA01_15305 PF00072 Response regulator receiver domain EBA01_15305 PF01627 Hpt domain EBA01_15305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_15305 PF00672 HAMP domain EBA01_15305 PF17149 Periplasmic sensor domain found in signal transduction proteins EBA01_15310 PF00512 His Kinase A (phospho-acceptor) domain EBA01_15310 PF01627 Hpt domain EBA01_15310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_15310 PF00672 HAMP domain EBA01_15310 PF17149 Periplasmic sensor domain found in signal transduction proteins EBA01_15310 PF00072 Response regulator receiver domain EBA01_15315 PF04264 YceI-like domain EBA01_15340 PF03315 Serine dehydratase beta chain EBA01_15340 PF03313 Serine dehydratase alpha chain EBA01_15350 PF01053 Cys/Met metabolism PLP-dependent enzyme EBA01_15355 PF00561 alpha/beta hydrolase fold EBA01_15360 PF08525 Opacity-associated protein A N-terminal motif EBA01_15360 PF01551 Peptidase family M23 EBA01_15360 PF01476 LysM domain EBA01_15365 PF16658 Class II release factor RF3, C-terminal domain EBA01_15365 PF00009 Elongation factor Tu GTP binding domain EBA01_15370 PF03006 Haemolysin-III related EBA01_15380 PF05598 Transposase domain (DUF772) EBA01_15390 PF00571 CBS domain EBA01_15390 PF00478 IMP dehydrogenase / GMP reductase domain EBA01_15395 PF00535 Glycosyl transferase family 2 EBA01_15400 PF00912 Transglycosylase EBA01_15405 PF01430 Hsp33 protein EBA01_15415 PF07715 TonB-dependent Receptor Plug Domain EBA01_15415 PF00593 TonB dependent receptor EBA01_15420 PF00440 Bacterial regulatory proteins, tetR family EBA01_15425 PF00561 alpha/beta hydrolase fold EBA01_15430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EBA01_15430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EBA01_15430 PF09317 Domain of unknown function (DUF1974) EBA01_15460 PF01597 Glycine cleavage H-protein EBA01_15465 PF01571 Aminomethyltransferase folate-binding domain EBA01_15465 PF08669 Glycine cleavage T-protein C-terminal barrel domain EBA01_15475 PF16200 C-terminal region of band_7 EBA01_15475 PF01145 SPFH domain / Band 7 family EBA01_15485 PF02694 Uncharacterised BCR, YnfA/UPF0060 family EBA01_15490 PF03819 MazG nucleotide pyrophosphohydrolase domain EBA01_15495 PF00459 Inositol monophosphatase family EBA01_15500 PF00293 NUDIX domain EBA01_15505 PF00202 Aminotransferase class-III EBA01_15510 PF04452 RNA methyltransferase EBA01_15515 PF02685 Glucokinase EBA01_15530 PF01476 LysM domain EBA01_15530 PF00704 Glycosyl hydrolases family 18 EBA01_15550 PF07691 PA14 domain EBA01_15550 PF14310 Fibronectin type III-like domain EBA01_15550 PF00933 Glycosyl hydrolase family 3 N terminal domain EBA01_15550 PF01915 Glycosyl hydrolase family 3 C-terminal domain EBA01_15555 PF00005 ABC transporter EBA01_15555 PF00664 ABC transporter transmembrane region EBA01_15555 PF03412 Peptidase C39 family EBA01_15565 PF05598 Transposase domain (DUF772) EBA01_15585 PF17678 Glycosyl hydrolase family 92 N-terminal domain EBA01_15585 PF07971 Glycosyl hydrolase family 92 EBA01_15595 PF01301 Glycosyl hydrolases family 35 EBA01_15630 PF03932 CutC family EBA01_15635 PF01112 Asparaginase EBA01_15645 PF12034 Domain of unknown function (DUF3520) EBA01_15645 PF00092 von Willebrand factor type A domain EBA01_15645 PF12450 von Willebrand factor EBA01_15655 PF13302 Acetyltransferase (GNAT) domain EBA01_15670 PF01584 CheW-like domain EBA01_15670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_15670 PF01627 Hpt domain EBA01_15670 PF00072 Response regulator receiver domain EBA01_15675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA01_15675 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term EBA01_15680 PF01584 CheW-like domain EBA01_15685 PF00072 Response regulator receiver domain EBA01_15690 PF00072 Response regulator receiver domain EBA01_15695 PF02951 Prokaryotic glutathione synthetase, N-terminal domain EBA01_15695 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain EBA01_15705 PF03747 ADP-ribosylglycohydrolase EBA01_15710 PF00814 Glycoprotease family EBA01_15715 PF04851 Type III restriction enzyme, res subunit EBA01_15715 PF13307 Helicase C-terminal domain EBA01_15725 PF00912 Transglycosylase EBA01_15725 PF00905 Penicillin binding protein transpeptidase domain EBA01_15725 PF14814 Bifunctional transglycosylase second domain EBA01_15730 PF00535 Glycosyl transferase family 2 EBA01_15740 PF04607 Region found in RelA / SpoT proteins EBA01_15740 PF13291 ACT domain EBA01_15740 PF02824 TGS domain EBA01_15745 PF08042 PqqA family EBA01_15750 PF12706 Beta-lactamase superfamily domain EBA01_15760 PF05402 Coenzyme PQQ synthesis protein D (PqqD) EBA01_15765 PF13186 Iron-sulfur cluster-binding domain EBA01_15765 PF04055 Radical SAM superfamily EBA01_15790 PF00270 DEAD/DEAH box helicase EBA01_15790 PF11898 Domain of unknown function (DUF3418) EBA01_15790 PF04408 Helicase associated domain (HA2) EBA01_15790 PF00271 Helicase conserved C-terminal domain EBA01_15790 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold EBA01_15795 PF00210 Ferritin-like domain EBA01_15810 PF16124 RecQ zinc-binding EBA01_15810 PF00270 DEAD/DEAH box helicase EBA01_15810 PF00271 Helicase conserved C-terminal domain EBA01_15810 PF09382 RQC domain EBA01_15810 PF00570 HRDC domain EBA01_15825 PF05598 Transposase domain (DUF772) EBA01_15825 PF01609 Transposase DDE domain EBA01_15840 PF01479 S4 domain EBA01_15840 PF00849 RNA pseudouridylate synthase EBA01_15875 PF05598 Transposase domain (DUF772) EBA01_15890 PF06508 Queuosine biosynthesis protein QueC EBA01_15900 PF04055 Radical SAM superfamily EBA01_15910 PF00691 OmpA family EBA01_15915 PF04052 TolB amino-terminal domain EBA01_15915 PF07676 WD40-like Beta Propeller Repeat EBA01_15925 PF02472 Biopolymer transport protein ExbD/TolR EBA01_15930 PF01618 MotA/TolQ/ExbB proton channel family EBA01_15935 PF03061 Thioesterase superfamily EBA01_15940 PF17864 RuvB AAA lid domain EBA01_15940 PF05491 RuvB C-terminal winged helix domain EBA01_15940 PF05496 Holliday junction DNA helicase RuvB P-loop domain EBA01_15945 PF02705 K+ potassium transporter EBA01_15950 PF01330 RuvA N terminal domain EBA01_15950 PF07499 RuvA, C-terminal domain EBA01_15955 PF02075 Crossover junction endodeoxyribonuclease RuvC EBA01_15960 PF01709 Transcriptional regulator EBA01_15975 PF02938 GAD domain EBA01_15975 PF00152 tRNA synthetases class II (D, K and N) EBA01_15975 PF01336 OB-fold nucleic acid binding domain EBA01_15990 PF07690 Major Facilitator Superfamily EBA01_15995 PF05506 Domain of unknown function (DUF756) EBA01_15995 PF04185 Phosphoesterase family EBA01_16015 PF03466 LysR substrate binding domain EBA01_16015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA01_16025 PF12848 ABC transporter EBA01_16025 PF00005 ABC transporter EBA01_16030 PF07715 TonB-dependent Receptor Plug Domain EBA01_16030 PF00593 TonB dependent receptor EBA01_16040 PF00593 TonB dependent receptor EBA01_16040 PF07715 TonB-dependent Receptor Plug Domain EBA01_16045 PF07715 TonB-dependent Receptor Plug Domain EBA01_16045 PF00593 TonB dependent receptor EBA01_16055 PF00999 Sodium/hydrogen exchanger family EBA01_16055 PF02254 TrkA-N domain EBA01_16090 PF04273 Putative phosphatase (DUF442) EBA01_16090 PF00753 Metallo-beta-lactamase superfamily EBA01_16100 PF07660 Secretin and TonB N terminus short domain EBA01_16100 PF00593 TonB dependent receptor EBA01_16100 PF07715 TonB-dependent Receptor Plug Domain EBA01_16110 PF04183 IucA / IucC family EBA01_16110 PF06276 Ferric iron reductase FhuF-like transporter EBA01_16115 PF07690 Major Facilitator Superfamily EBA01_16125 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EBA01_16125 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EBA01_16135 PF02654 Cobalamin-5-phosphate synthase EBA01_16145 PF02277 Phosphoribosyltransferase EBA01_16150 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase EBA01_16155 PF00155 Aminotransferase class I and II EBA01_16160 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP EBA01_16160 PF12557 Cob(I)alamin adenosyltransferase N terminal EBA01_16180 PF07715 TonB-dependent Receptor Plug Domain EBA01_16180 PF00593 TonB dependent receptor EBA01_16210 PF17871 AAA lid domain EBA01_16210 PF10431 C-terminal, D2-small domain, of ClpB protein EBA01_16210 PF00004 ATPase family associated with various cellular activities (AAA) EBA01_16210 PF07724 AAA domain (Cdc48 subfamily) EBA01_16210 PF02861 Clp amino terminal domain, pathogenicity island component EBA01_16215 PF01541 GIY-YIG catalytic domain EBA01_16225 PF05188 MutS domain II EBA01_16225 PF05190 MutS family domain IV EBA01_16225 PF01624 MutS domain I EBA01_16225 PF00488 MutS domain V EBA01_16225 PF05192 MutS domain III EBA01_16235 PF00141 Peroxidase EBA01_16240 PF01479 S4 domain EBA01_16245 PF01554 MatE EBA01_16255 PF01245 Ribosomal protein L19 EBA01_16260 PF01746 tRNA (Guanine-1)-methyltransferase EBA01_16265 PF05239 PRC-barrel domain EBA01_16265 PF01782 RimM N-terminal domain EBA01_16270 PF00886 Ribosomal protein S16 EBA01_16295 PF02978 Signal peptide binding domain EBA01_16295 PF00448 SRP54-type protein, GTPase domain EBA01_16295 PF02881 SRP54-type protein, helical bundle domain EBA01_16300 PF01578 Cytochrome C assembly protein EBA01_16305 PF01263 Aldose 1-epimerase EBA01_16310 PF06964 Alpha-L-arabinofuranosidase C-terminal domain EBA01_16325 PF08448 PAS fold EBA01_16325 PF13188 PAS domain EBA01_16325 PF00512 His Kinase A (phospho-acceptor) domain EBA01_16325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_16325 PF00072 Response regulator receiver domain EBA01_16330 PF00672 HAMP domain EBA01_16330 PF01627 Hpt domain EBA01_16330 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EBA01_16330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_16330 PF00072 Response regulator receiver domain EBA01_16330 PF00512 His Kinase A (phospho-acceptor) domain EBA01_16340 PF13581 Histidine kinase-like ATPase domain EBA01_16345 PF01740 STAS domain EBA01_16350 PF08678 Rsbr N terminal EBA01_16350 PF01740 STAS domain EBA01_16360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_16360 PF00183 Hsp90 protein EBA01_16365 PF12833 Helix-turn-helix domain EBA01_16385 PF18073 Rubredoxin metal binding domain EBA01_16405 PF14220 Domain of unknown function (DUF4329) EBA01_16405 PF05593 RHS Repeat EBA01_16405 PF03527 RHS protein EBA01_16415 PF04717 Type VI secretion system, phage-baseplate injector EBA01_16425 PF03626 Prokaryotic Cytochrome C oxidase subunit IV EBA01_16430 PF00510 Cytochrome c oxidase subunit III EBA01_16435 PF00115 Cytochrome C and Quinol oxidase polypeptide I EBA01_16440 PF06481 COX Aromatic Rich Motif EBA01_16440 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EBA01_16450 PF02401 LytB protein EBA01_16455 PF01252 Signal peptidase (SPase) II EBA01_16460 PF08264 Anticodon-binding domain of tRNA EBA01_16460 PF06827 Zinc finger found in FPG and IleRS EBA01_16460 PF00133 tRNA synthetases class I (I, L, M and V) EBA01_16470 PF03023 Lipid II flippase MurJ EBA01_16475 PF01649 Ribosomal protein S20 EBA01_16480 PF01018 GTP1/OBG EBA01_16480 PF01926 50S ribosome-binding GTPase EBA01_16485 PF01016 Ribosomal L27 protein EBA01_16490 PF00829 Ribosomal prokaryotic L21 protein EBA01_16495 PF17760 UvrA interaction domain EBA01_16495 PF00005 ABC transporter EBA01_16495 PF17755 UvrA DNA-binding domain EBA01_16510 PF00378 Enoyl-CoA hydratase/isomerase EBA01_16525 PF08281 Sigma-70, region 4 EBA01_16525 PF04542 Sigma-70 region 2 EBA01_16540 PF04376 Arginine-tRNA-protein transferase, N terminus EBA01_16540 PF04377 Arginine-tRNA-protein transferase, C terminus EBA01_16570 PF07715 TonB-dependent Receptor Plug Domain EBA01_16570 PF00593 TonB dependent receptor EBA01_16580 PF02358 Trehalose-phosphatase EBA01_16585 PF00723 Glycosyl hydrolases family 15 EBA01_16590 PF00982 Glycosyltransferase family 20 EBA01_16595 PF01011 PQQ enzyme repeat EBA01_16625 PF00849 RNA pseudouridylate synthase EBA01_16630 PF13525 Outer membrane lipoprotein EBA01_16635 PF02540 NAD synthase EBA01_16635 PF00795 Carbon-nitrogen hydrolase EBA01_16650 PF00549 CoA-ligase EBA01_16650 PF02629 CoA binding domain EBA01_16655 PF00549 CoA-ligase EBA01_16655 PF08442 ATP-grasp domain EBA01_16660 PF00512 His Kinase A (phospho-acceptor) domain EBA01_16660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_16665 PF00072 Response regulator receiver domain EBA01_16665 PF02954 Bacterial regulatory protein, Fis family EBA01_16665 PF00158 Sigma-54 interaction domain EBA01_16675 PF02661 Fic/DOC family EBA01_16680 PF00437 Type II/IV secretion system protein EBA01_16680 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EBA01_16695 PF08019 Phosphoethanolamine transferase EptA/EptB EBA01_16695 PF00884 Sulfatase EBA01_16700 PF00114 Pilin (bacterial filament) EBA01_16700 PF07963 Prokaryotic N-terminal methylation motif EBA01_16705 PF00482 Type II secretion system (T2SS), protein F EBA01_16710 PF06750 Bacterial Peptidase A24 N-terminal domain EBA01_16710 PF01478 Type IV leader peptidase family EBA01_16715 PF01121 Dephospho-CoA kinase EBA01_16720 PF00672 HAMP domain EBA01_16720 PF00512 His Kinase A (phospho-acceptor) domain EBA01_16720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_16725 PF00072 Response regulator receiver domain EBA01_16725 PF00486 Transcriptional regulatory protein, C terminal EBA01_16735 PF18030 RimK PreATP-grasp domain EBA01_16735 PF08443 RimK-like ATP-grasp domain EBA01_16740 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EBA01_16740 PF00128 Alpha amylase, catalytic domain EBA01_16745 PF01609 Transposase DDE domain EBA01_16745 PF05598 Transposase domain (DUF772) EBA01_16760 PF05598 Transposase domain (DUF772) EBA01_16760 PF01609 Transposase DDE domain EBA01_16765 PF05598 Transposase domain (DUF772) EBA01_16790 PF05598 Transposase domain (DUF772) EBA01_16790 PF01609 Transposase DDE domain EBA01_16815 PF05690 Thiazole biosynthesis protein ThiG EBA01_16825 PF02390 Putative methyltransferase EBA01_16830 PF03600 Citrate transporter EBA01_16830 PF02080 TrkA-C domain EBA01_16855 PF01557 Fumarylacetoacetate (FAA) hydrolase family EBA01_16860 PF01741 Large-conductance mechanosensitive channel, MscL EBA01_16895 PF00588 SpoU rRNA Methylase family EBA01_16895 PF08032 RNA 2'-O ribose methyltransferase substrate binding EBA01_16905 PF11838 ERAP1-like C-terminal domain EBA01_16905 PF01433 Peptidase family M1 domain EBA01_16910 PF00873 AcrB/AcrD/AcrF family EBA01_16915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EBA01_16915 PF00529 HlyD membrane-fusion protein of T1SS EBA01_16920 PF00009 Elongation factor Tu GTP binding domain EBA01_16925 PF01507 Phosphoadenosine phosphosulfate reductase family EBA01_16930 PF00175 Oxidoreductase NAD-binding domain EBA01_16930 PF00258 Flavodoxin EBA01_16930 PF00667 FAD binding domain EBA01_16935 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EBA01_16935 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EBA01_16940 PF01507 Phosphoadenosine phosphosulfate reductase family EBA01_16960 PF00512 His Kinase A (phospho-acceptor) domain EBA01_16960 PF01627 Hpt domain EBA01_16960 PF00672 HAMP domain EBA01_16960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_16960 PF00072 Response regulator receiver domain EBA01_16985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA01_16985 PF03466 LysR substrate binding domain EBA01_16990 PF14824 Sirohaem biosynthesis protein central EBA01_16990 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EBA01_16990 PF10414 Sirohaem synthase dimerisation region EBA01_16995 PF00291 Pyridoxal-phosphate dependent enzyme EBA01_17005 PF01661 Macro domain EBA01_17010 PF00274 Fructose-bisphosphate aldolase class-I EBA01_17020 PF00224 Pyruvate kinase, barrel domain EBA01_17020 PF02887 Pyruvate kinase, alpha/beta domain EBA01_17030 PF00162 Phosphoglycerate kinase EBA01_17045 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EBA01_17045 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EBA01_17060 PF04273 Putative phosphatase (DUF442) EBA01_17060 PF00753 Metallo-beta-lactamase superfamily EBA01_17070 PF00528 Binding-protein-dependent transport system inner membrane component EBA01_17075 PF00005 ABC transporter EBA01_17075 PF03459 TOBE domain EBA01_17095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_17095 PF08521 Two-component sensor kinase N-terminal EBA01_17095 PF00512 His Kinase A (phospho-acceptor) domain EBA01_17100 PF00486 Transcriptional regulatory protein, C terminal EBA01_17100 PF00072 Response regulator receiver domain EBA01_17120 PF00501 AMP-binding enzyme EBA01_17145 PF01476 LysM domain EBA01_17145 PF03734 L,D-transpeptidase catalytic domain EBA01_17150 PF01551 Peptidase family M23 EBA01_17150 PF04225 Opacity-associated protein A LysM-like domain EBA01_17165 PF02780 Transketolase, C-terminal domain EBA01_17165 PF00456 Transketolase, thiamine diphosphate binding domain EBA01_17165 PF02779 Transketolase, pyrimidine binding domain EBA01_17170 PF00375 Sodium:dicarboxylate symporter family EBA01_17190 PF00092 von Willebrand factor type A domain EBA01_17190 PF07584 Aerotolerance regulator N-terminal EBA01_17210 PF17863 AAA lid domain EBA01_17210 PF07726 ATPase family associated with various cellular activities (AAA) EBA01_17220 PF07660 Secretin and TonB N terminus short domain EBA01_17220 PF00263 Bacterial type II and III secretion system protein EBA01_17220 PF11741 AMIN domain EBA01_17220 PF03958 Bacterial type II/III secretion system short domain EBA01_17245 PF17092 Penicillin-binding protein OB-like domain EBA01_17245 PF00905 Penicillin binding protein transpeptidase domain EBA01_17245 PF00912 Transglycosylase EBA01_17250 PF05598 Transposase domain (DUF772) EBA01_17265 PF00285 Citrate synthase, C-terminal domain EBA01_17270 PF01197 Ribosomal protein L31 EBA01_17275 PF01156 Inosine-uridine preferring nucleoside hydrolase EBA01_17280 PF00271 Helicase conserved C-terminal domain EBA01_17280 PF00270 DEAD/DEAH box helicase EBA01_17280 PF17191 RecG wedge domain EBA01_17285 PF01042 Endoribonuclease L-PSP EBA01_17290 PF02824 TGS domain EBA01_17290 PF04607 Region found in RelA / SpoT proteins EBA01_17290 PF13291 ACT domain EBA01_17295 PF01192 RNA polymerase Rpb6 EBA01_17305 PF00625 Guanylate kinase EBA01_17310 PF03755 YicC-like family, N-terminal region EBA01_17310 PF08340 Domain of unknown function (DUF1732) EBA01_17315 PF01138 3' exoribonuclease family, domain 1 EBA01_17315 PF03725 3' exoribonuclease family, domain 2 EBA01_17325 PF01725 Ham1 family EBA01_17330 PF06969 HemN C-terminal domain EBA01_17330 PF04055 Radical SAM superfamily EBA01_17345 PF00557 Metallopeptidase family M24 EBA01_17360 PF05195 Aminopeptidase P, N-terminal domain EBA01_17360 PF00557 Metallopeptidase family M24 EBA01_17365 PF03695 Uncharacterised protein family (UPF0149) EBA01_17375 PF05164 Cell division protein ZapA EBA01_17385 PF01812 5-formyltetrahydrofolate cyclo-ligase family EBA01_17395 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EBA01_17405 PF13369 Transglutaminase-like superfamily EBA01_17410 PF00301 Rubredoxin EBA01_17415 PF02581 Thiamine monophosphate synthase EBA01_17425 PF00202 Aminotransferase class-III EBA01_17435 PF00196 Bacterial regulatory proteins, luxR family EBA01_17435 PF17874 MalT-like TPR region EBA01_17440 PF00127 Copper binding proteins, plastocyanin/azurin family EBA01_17480 PF00202 Aminotransferase class-III EBA01_17505 PF01569 PAP2 superfamily EBA01_17520 PF01062 Bestrophin, RFP-TM, chloride channel EBA01_17530 PF02875 Mur ligase family, glutamate ligase domain EBA01_17530 PF08245 Mur ligase middle domain EBA01_17530 PF01225 Mur ligase family, catalytic domain EBA01_17540 PF00365 Phosphofructokinase EBA01_17545 PF05598 Transposase domain (DUF772) EBA01_17545 PF01609 Transposase DDE domain EBA01_17570 PF00719 Inorganic pyrophosphatase EBA01_17585 PF00593 TonB dependent receptor EBA01_17585 PF07715 TonB-dependent Receptor Plug Domain EBA01_17590 PF12833 Helix-turn-helix domain EBA01_17595 PF00486 Transcriptional regulatory protein, C terminal EBA01_17595 PF18500 CadC C-terminal domain 1 EBA01_17600 PF01964 Radical SAM ThiC family EBA01_17600 PF13667 ThiC-associated domain EBA01_17610 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain EBA01_17610 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain EBA01_17615 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EBA01_17615 PF00205 Thiamine pyrophosphate enzyme, central domain EBA01_17615 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EBA01_17625 PF00291 Pyridoxal-phosphate dependent enzyme EBA01_17630 PF08502 LeuA allosteric (dimerisation) domain EBA01_17630 PF00682 HMGL-like EBA01_17635 PF00180 Isocitrate/isopropylmalate dehydrogenase EBA01_17640 PF08241 Methyltransferase domain EBA01_17645 PF00694 Aconitase C-terminal domain EBA01_17650 PF00330 Aconitase family (aconitate hydratase) EBA01_17655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA01_17675 PF02321 Outer membrane efflux protein EBA01_17680 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) EBA01_17685 PF03279 Bacterial lipid A biosynthesis acyltransferase EBA01_17705 PF03412 Peptidase C39 family EBA01_17705 PF00664 ABC transporter transmembrane region EBA01_17705 PF00005 ABC transporter EBA01_17715 PF13936 Helix-turn-helix domain EBA01_17715 PF00665 Integrase core domain EBA01_17720 PF00664 ABC transporter transmembrane region EBA01_17720 PF00005 ABC transporter EBA01_17720 PF03412 Peptidase C39 family EBA01_17755 PF00390 Malic enzyme, N-terminal domain EBA01_17755 PF03949 Malic enzyme, NAD binding domain EBA01_17755 PF01515 Phosphate acetyl/butaryl transferase EBA01_17760 PF00375 Sodium:dicarboxylate symporter family EBA01_17775 PF00512 His Kinase A (phospho-acceptor) domain EBA01_17775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_17780 PF07690 Major Facilitator Superfamily EBA01_17790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA01_17790 PF03466 LysR substrate binding domain EBA01_17810 PF00072 Response regulator receiver domain EBA01_17810 PF00196 Bacterial regulatory proteins, luxR family EBA01_17820 PF08521 Two-component sensor kinase N-terminal EBA01_17820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_17820 PF00512 His Kinase A (phospho-acceptor) domain EBA01_17825 PF00486 Transcriptional regulatory protein, C terminal EBA01_17825 PF00072 Response regulator receiver domain EBA01_17840 PF03600 Citrate transporter EBA01_17845 PF00106 short chain dehydrogenase EBA01_17855 PF00356 Bacterial regulatory proteins, lacI family EBA01_17870 PF00128 Alpha amylase, catalytic domain EBA01_17885 PF03193 RsgA GTPase EBA01_17890 PF00155 Aminotransferase class I and II EBA01_17910 PF01522 Polysaccharide deacetylase EBA01_17915 PF00462 Glutaredoxin EBA01_17935 PF01979 Amidohydrolase family EBA01_17985 PF01327 Polypeptide deformylase EBA01_17990 PF05598 Transposase domain (DUF772) EBA01_17990 PF01609 Transposase DDE domain EBA01_17995 PF03960 ArsC family EBA01_18020 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family EBA01_18020 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain EBA01_18065 PF07715 TonB-dependent Receptor Plug Domain EBA01_18065 PF00593 TonB dependent receptor EBA01_18080 PF00392 Bacterial regulatory proteins, gntR family EBA01_18080 PF07702 UTRA domain EBA01_18095 PF00263 Bacterial type II and III secretion system protein EBA01_18095 PF03958 Bacterial type II/III secretion system short domain EBA01_18105 PF10741 Type II secretion system (T2SS), protein M subtype b EBA01_18110 PF05137 Fimbrial assembly protein (PilN) EBA01_18115 PF03934 Type II secretion system (T2SS), protein K EBA01_18125 PF07963 Prokaryotic N-terminal methylation motif EBA01_18130 PF12019 Type II transport protein GspH EBA01_18135 PF08334 Type II secretion system (T2SS), protein G EBA01_18140 PF00482 Type II secretion system (T2SS), protein F EBA01_18150 PF00437 Type II/IV secretion system protein EBA01_18150 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EBA01_18155 PF04151 Bacterial pre-peptidase C-terminal domain EBA01_18155 PF00082 Subtilase family EBA01_18160 PF03895 YadA-like membrane anchor domain EBA01_18160 PF05658 Head domain of trimeric autotransporter adhesin EBA01_18160 PF05662 Coiled stalk of trimeric autotransporter adhesin EBA01_18160 PF13018 Extended Signal Peptide of Type V secretion system EBA01_18170 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain EBA01_18170 PF02769 AIR synthase related protein, C-terminal domain EBA01_18170 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal EBA01_18180 PF10411 Disulfide bond isomerase protein N-terminus EBA01_18180 PF13098 Thioredoxin-like domain EBA01_18185 PF02899 Phage integrase, N-terminal SAM-like domain EBA01_18185 PF00589 Phage integrase family EBA01_18200 PF03739 Lipopolysaccharide export system permease LptF/LptG EBA01_18210 PF02789 Cytosol aminopeptidase family, N-terminal domain EBA01_18210 PF00883 Cytosol aminopeptidase family, catalytic domain EBA01_18235 PF08264 Anticodon-binding domain of tRNA EBA01_18235 PF10458 Valyl tRNA synthetase tRNA binding arm EBA01_18235 PF00133 tRNA synthetases class I (I, L, M and V) EBA01_18245 PF01464 Transglycosylase SLT domain EBA01_18245 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain EBA01_18275 PF13936 Helix-turn-helix domain EBA01_18275 PF00665 Integrase core domain EBA01_18285 PF13936 Helix-turn-helix domain EBA01_18285 PF00665 Integrase core domain EBA01_18310 PF01066 CDP-alcohol phosphatidyltransferase EBA01_18320 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EBA01_18320 PF04073 Aminoacyl-tRNA editing domain EBA01_18320 PF03129 Anticodon binding domain EBA01_18325 PF00816 H-NS histone family EBA01_18335 PF02405 Permease MlaE EBA01_18340 PF00005 ABC transporter EBA01_18345 PF03886 ABC-type transport auxiliary lipoprotein component EBA01_18345 PF02470 MlaD protein EBA01_18375 PF14307 Glycosyltransferase WbsX EBA01_18375 PF05045 Rhamnan synthesis protein F EBA01_18380 PF01144 Coenzyme A transferase EBA01_18385 PF01144 Coenzyme A transferase EBA01_18390 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EBA01_18390 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EBA01_18390 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EBA01_18390 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EBA01_18395 PF01050 Mannose-6-phosphate isomerase EBA01_18395 PF00483 Nucleotidyl transferase EBA01_18400 PF04321 RmlD substrate binding domain EBA01_18405 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase EBA01_18410 PF00483 Nucleotidyl transferase EBA01_18415 PF16363 GDP-mannose 4,6 dehydratase EBA01_18425 PF01012 Electron transfer flavoprotein domain EBA01_18430 PF01012 Electron transfer flavoprotein domain EBA01_18430 PF00766 Electron transfer flavoprotein FAD-binding domain EBA01_18440 PF00005 ABC transporter EBA01_18445 PF05598 Transposase domain (DUF772) EBA01_18475 PF01370 NAD dependent epimerase/dehydratase family EBA01_18485 PF01053 Cys/Met metabolism PLP-dependent enzyme EBA01_18490 PF00291 Pyridoxal-phosphate dependent enzyme EBA01_18490 PF00571 CBS domain EBA01_18510 PF00437 Type II/IV secretion system protein EBA01_18515 PF14497 Glutathione S-transferase, C-terminal domain EBA01_18515 PF02798 Glutathione S-transferase, N-terminal domain EBA01_18530 PF00270 DEAD/DEAH box helicase EBA01_18530 PF00271 Helicase conserved C-terminal domain EBA01_18540 PF01242 6-pyruvoyl tetrahydropterin synthase EBA01_18555 PF13185 GAF domain EBA01_18565 PF01609 Transposase DDE domain EBA01_18565 PF05598 Transposase domain (DUF772) EBA01_18570 PF13419 Haloacid dehalogenase-like hydrolase EBA01_18575 PF00817 impB/mucB/samB family EBA01_18575 PF11799 impB/mucB/samB family C-terminal domain EBA01_18585 PF07977 FabA-like domain EBA01_18590 PF02801 Beta-ketoacyl synthase, C-terminal domain EBA01_18590 PF00109 Beta-ketoacyl synthase, N-terminal domain EBA01_18600 PF01432 Peptidase family M3 EBA01_18615 PF07732 Multicopper oxidase EBA01_18615 PF07731 Multicopper oxidase EBA01_18615 PF00394 Multicopper oxidase EBA01_18620 PF05275 Copper resistance protein B precursor (CopB) EBA01_18625 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EBA01_18650 PF01380 SIS domain EBA01_18690 PF14602 Hexapeptide repeat of succinyl-transferase EBA01_18690 PF12804 MobA-like NTP transferase domain EBA01_18690 PF00132 Bacterial transferase hexapeptide (six repeats) EBA01_18705 PF01817 Chorismate mutase type II EBA01_18710 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain EBA01_18715 PF02874 ATP synthase alpha/beta family, beta-barrel domain EBA01_18715 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EBA01_18720 PF00231 ATP synthase EBA01_18725 PF02874 ATP synthase alpha/beta family, beta-barrel domain EBA01_18725 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EBA01_18725 PF00306 ATP synthase alpha/beta chain, C terminal domain EBA01_18730 PF00213 ATP synthase delta (OSCP) subunit EBA01_18735 PF00430 ATP synthase B/B' CF(0) EBA01_18740 PF00137 ATP synthase subunit C EBA01_18745 PF00119 ATP synthase A chain EBA01_18765 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EBA01_18765 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA01_18775 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EBA01_18775 PF02817 e3 binding domain EBA01_18775 PF00364 Biotin-requiring enzyme EBA01_18805 PF03180 NLPA lipoprotein EBA01_18810 PF00528 Binding-protein-dependent transport system inner membrane component EBA01_18815 PF00005 ABC transporter EBA01_18815 PF09383 NIL domain EBA01_18820 PF00892 EamA-like transporter family EBA01_18825 PF04461 Protein of unknown function (DUF520) EBA01_18855 PF13419 Haloacid dehalogenase-like hydrolase EBA01_18860 PF00849 RNA pseudouridylate synthase EBA01_18860 PF01479 S4 domain EBA01_18865 PF05175 Methyltransferase small domain EBA01_18865 PF08468 Methyltransferase small domain N-terminal EBA01_18880 PF07995 Glucose / Sorbosone dehydrogenase EBA01_18895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_18895 PF00512 His Kinase A (phospho-acceptor) domain EBA01_18895 PF00989 PAS fold EBA01_18915 PF01168 Alanine racemase, N-terminal domain EBA01_18915 PF00842 Alanine racemase, C-terminal domain EBA01_18920 PF01266 FAD dependent oxidoreductase EBA01_18925 PF01037 Lrp/AsnC ligand binding domain EBA01_18935 PF01641 SelR domain EBA01_18945 PF01618 MotA/TolQ/ExbB proton channel family EBA01_18950 PF13677 Membrane MotB of proton-channel complex MotA/MotB EBA01_18950 PF00691 OmpA family EBA01_18970 PF00486 Transcriptional regulatory protein, C terminal EBA01_18970 PF00072 Response regulator receiver domain EBA01_18975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_18975 PF00512 His Kinase A (phospho-acceptor) domain EBA01_18975 PF13188 PAS domain EBA01_18975 PF00072 Response regulator receiver domain EBA01_18975 PF08448 PAS fold EBA01_18985 PF04151 Bacterial pre-peptidase C-terminal domain EBA01_18985 PF00082 Subtilase family EBA01_19000 PF01061 ABC-2 type transporter EBA01_19005 PF00005 ABC transporter EBA01_19010 PF00999 Sodium/hydrogen exchanger family EBA01_19020 PF02469 Fasciclin domain EBA01_19030 PF03167 Uracil DNA glycosylase superfamily EBA01_19040 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase EBA01_19050 PF03358 NADPH-dependent FMN reductase EBA01_19055 PF00248 Aldo/keto reductase family EBA01_19090 PF13520 Amino acid permease EBA01_19100 PF04397 LytTr DNA-binding domain EBA01_19100 PF00072 Response regulator receiver domain EBA01_19115 PF05974 Domain of unknown function (DUF892) EBA01_19120 PF05067 Manganese containing catalase EBA01_19135 PF08448 PAS fold EBA01_19135 PF01339 CheB methylesterase EBA01_19135 PF01739 CheR methyltransferase, SAM binding domain EBA01_19135 PF03705 CheR methyltransferase, all-alpha domain EBA01_19145 PF01609 Transposase DDE domain EBA01_19145 PF05598 Transposase domain (DUF772) EBA01_19160 PF02954 Bacterial regulatory protein, Fis family EBA01_19160 PF00158 Sigma-54 interaction domain EBA01_19160 PF00072 Response regulator receiver domain EBA01_19175 PF01654 Cytochrome bd terminal oxidase subunit I EBA01_19180 PF02322 Cytochrome bd terminal oxidase subunit II EBA01_19215 PF08240 Alcohol dehydrogenase GroES-like domain EBA01_19215 PF13823 Alcohol dehydrogenase GroES-associated EBA01_19215 PF00107 Zinc-binding dehydrogenase EBA01_19255 PF00593 TonB dependent receptor EBA01_19255 PF07715 TonB-dependent Receptor Plug Domain EBA01_19270 PF00005 ABC transporter EBA01_19290 PF03971 Monomeric isocitrate dehydrogenase EBA01_19310 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term EBA01_19310 PF14489 QueF-like protein EBA01_19320 PF01546 Peptidase family M20/M25/M40 EBA01_19320 PF07687 Peptidase dimerisation domain EBA01_19325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EBA01_19330 PF00873 AcrB/AcrD/AcrF family EBA01_19335 PF00873 AcrB/AcrD/AcrF family EBA01_19355 PF07063 Domain of unknown function (DUF1338) EBA01_19405 PF01510 N-acetylmuramoyl-L-alanine amidase EBA01_19415 PF13378 Enolase C-terminal domain-like EBA01_19415 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EBA01_19440 PF13520 Amino acid permease EBA01_19460 PF05360 yiaA/B two helix domain EBA01_19465 PF07995 Glucose / Sorbosone dehydrogenase EBA01_19480 PF00933 Glycosyl hydrolase family 3 N terminal domain EBA01_19480 PF14310 Fibronectin type III-like domain EBA01_19480 PF01915 Glycosyl hydrolase family 3 C-terminal domain EBA01_19485 PF02152 Dihydroneopterin aldolase EBA01_19490 PF00814 Glycoprotease family EBA01_19495 PF01165 Ribosomal protein S21 EBA01_19505 PF09424 Yqey-like protein EBA01_19525 PF03631 Virulence factor BrkB EBA01_19530 PF08275 DNA primase catalytic core, N-terminal domain EBA01_19530 PF08278 DNA primase DnaG DnaB-binding EBA01_19530 PF01807 CHC2 zinc finger EBA01_19530 PF10410 DnaB-helicase binding domain of primase EBA01_19550 PF13593 SBF-like CPA transporter family (DUF4137) EBA01_19570 PF01040 UbiA prenyltransferase family EBA01_19595 PF00510 Cytochrome c oxidase subunit III EBA01_19600 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 EBA01_19610 PF00115 Cytochrome C and Quinol oxidase polypeptide I EBA01_19615 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EBA01_19615 PF02790 Cytochrome C oxidase subunit II, transmembrane domain EBA01_19625 PF14850 DNA-binding domain of Proline dehydrogenase EBA01_19625 PF01619 Proline dehydrogenase EBA01_19625 PF00171 Aldehyde dehydrogenase family EBA01_19625 PF18327 Proline utilization A proline dehydrogenase N-terminal domain EBA01_19675 PF00579 tRNA synthetases class I (W and Y) EBA01_19680 PF04225 Opacity-associated protein A LysM-like domain EBA01_19680 PF01551 Peptidase family M23 EBA01_19685 PF03702 Anhydro-N-acetylmuramic acid kinase EBA01_19695 PF07690 Major Facilitator Superfamily EBA01_19700 PF03372 Endonuclease/Exonuclease/phosphatase family EBA01_19735 PF16671 Actin cross-linking domain EBA01_19735 PF04717 Type VI secretion system, phage-baseplate injector EBA01_19830 PF00574 Clp protease EBA01_19835 PF04860 Phage portal protein EBA01_19840 PF03354 Phage Terminase EBA01_19900 PF00772 DnaB-like helicase N terminal domain EBA01_19900 PF03796 DnaB-like helicase C terminal domain EBA01_19945 PF14659 Phage integrase, N-terminal SAM-like domain EBA01_19945 PF00589 Phage integrase family EBA01_19945 PF13356 Arm DNA-binding domain EBA01_19950 PF00156 Phosphoribosyl transferase domain EBA01_19960 PF13614 AAA domain EBA01_19965 PF02195 ParB-like nuclease domain EBA01_19965 PF17762 HTH domain found in ParB protein EBA01_19975 PF01370 NAD dependent epimerase/dehydratase family EBA01_19980 PF00535 Glycosyl transferase family 2 EBA01_19995 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EBA01_19995 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EBA01_19995 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EBA01_19995 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EBA01_20000 PF00692 dUTPase EBA01_20005 PF02441 Flavoprotein EBA01_20005 PF04127 DNA / pantothenate metabolism flavoprotein EBA01_20010 PF04002 RadC-like JAB domain EBA01_20015 PF05746 DALR anticodon binding domain EBA01_20015 PF03485 Arginyl tRNA synthetase N terminal domain EBA01_20015 PF00750 tRNA synthetases class I (R) EBA01_20030 PF00106 short chain dehydrogenase EBA01_20040 PF03377 TAL effector repeat EBA01_20070 PF17944 Arginine decarboxylase C-terminal helical extension EBA01_20070 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EBA01_20070 PF17810 Arginine decarboxylase helical bundle domain EBA01_20075 PF17284 Spermidine synthase tetramerisation domain EBA01_20110 PF00543 Nitrogen regulatory protein P-II EBA01_20115 PF04380 Membrane fusogenic activity EBA01_20120 PF01078 Magnesium chelatase, subunit ChlI EBA01_20120 PF13335 Magnesium chelatase, subunit ChlI C-terminal EBA01_20145 PF00563 EAL domain EBA01_20145 PF12792 CSS motif domain associated with EAL EBA01_20150 PF00487 Fatty acid desaturase EBA01_20155 PF00970 Oxidoreductase FAD-binding domain EBA01_20155 PF00111 2Fe-2S iron-sulfur cluster binding domain EBA01_20155 PF00175 Oxidoreductase NAD-binding domain EBA01_20160 PF00440 Bacterial regulatory proteins, tetR family EBA01_20165 PF05598 Transposase domain (DUF772) EBA01_20165 PF01609 Transposase DDE domain EBA01_20220 PF08338 Domain of unknown function (DUF1731) EBA01_20220 PF01370 NAD dependent epimerase/dehydratase family EBA01_20230 PF00512 His Kinase A (phospho-acceptor) domain EBA01_20230 PF08521 Two-component sensor kinase N-terminal EBA01_20230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_20245 PF00595 PDZ domain EBA01_20270 PF01594 AI-2E family transporter EBA01_20280 PF00883 Cytosol aminopeptidase family, catalytic domain EBA01_20280 PF02789 Cytosol aminopeptidase family, N-terminal domain EBA01_20290 PF08281 Sigma-70, region 4 EBA01_20290 PF04542 Sigma-70 region 2 EBA01_20295 PF00199 Catalase EBA01_20315 PF00892 EamA-like transporter family EBA01_20320 PF00892 EamA-like transporter family EBA01_20345 PF00753 Metallo-beta-lactamase superfamily EBA01_20350 PF00579 tRNA synthetases class I (W and Y) EBA01_20355 PF05532 CsbD-like EBA01_20370 PF00491 Arginase family EBA01_20390 PF02223 Thymidylate kinase EBA01_20405 PF03309 Type III pantothenate kinase EBA01_20410 PF08279 HTH domain EBA01_20410 PF03099 Biotin/lipoate A/B protein ligase family EBA01_20410 PF02237 Biotin protein ligase C terminal domain EBA01_20420 PF06167 Glucose-regulated metallo-peptidase M90 EBA01_20435 PF00512 His Kinase A (phospho-acceptor) domain EBA01_20435 PF00672 HAMP domain EBA01_20435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_20440 PF00486 Transcriptional regulatory protein, C terminal EBA01_20440 PF00072 Response regulator receiver domain EBA01_20450 PF01207 Dihydrouridine synthase (Dus) EBA01_20465 PF03377 TAL effector repeat EBA01_20500 PF00199 Catalase EBA01_20500 PF06628 Catalase-related immune-responsive EBA01_20505 PF01609 Transposase DDE domain EBA01_20505 PF05598 Transposase domain (DUF772) EBA01_20510 PF13533 Biotin-lipoyl like EBA01_20525 PF13307 Helicase C-terminal domain EBA01_20525 PF06733 DEAD_2 EBA01_20540 PF01488 Shikimate / quinate 5-dehydrogenase EBA01_20540 PF08501 Shikimate dehydrogenase substrate binding domain EBA01_20540 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EBA01_20560 PF00175 Oxidoreductase NAD-binding domain EBA01_20560 PF00258 Flavodoxin EBA01_20560 PF00667 FAD binding domain EBA01_20570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA01_20570 PF03466 LysR substrate binding domain EBA01_20585 PF00490 Delta-aminolevulinic acid dehydratase EBA01_20610 PF00326 Prolyl oligopeptidase family EBA01_20610 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region EBA01_20630 PF13936 Helix-turn-helix domain EBA01_20630 PF00665 Integrase core domain EBA01_20635 PF05598 Transposase domain (DUF772) EBA01_20665 PF00005 ABC transporter EBA01_20675 PF01381 Helix-turn-helix EBA01_20690 PF02583 Metal-sensitive transcriptional repressor EBA01_20695 PF01545 Cation efflux family EBA01_20700 PF00175 Oxidoreductase NAD-binding domain EBA01_20700 PF01383 CpcD/allophycocyanin linker domain EBA01_20705 PF00005 ABC transporter EBA01_20710 PF01061 ABC-2 type transporter EBA01_20720 PF02558 Ketopantoate reductase PanE/ApbA EBA01_20720 PF08546 Ketopantoate reductase PanE/ApbA C terminal EBA01_20745 PF05598 Transposase domain (DUF772) EBA01_20775 PF13406 Transglycosylase SLT domain EBA01_20795 PF00268 Ribonucleotide reductase, small chain EBA01_20805 PF03477 ATP cone domain EBA01_20805 PF02867 Ribonucleotide reductase, barrel domain EBA01_20805 PF00317 Ribonucleotide reductase, all-alpha domain EBA01_20820 PF13380 CoA binding domain EBA01_20820 PF00583 Acetyltransferase (GNAT) family EBA01_20820 PF13607 Succinyl-CoA ligase like flavodoxin domain EBA01_20830 PF00571 CBS domain EBA01_20830 PF03448 MgtE intracellular N domain EBA01_20830 PF01769 Divalent cation transporter EBA01_20840 PF00999 Sodium/hydrogen exchanger family EBA01_20840 PF02254 TrkA-N domain EBA01_20855 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EBA01_20855 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EBA01_20860 PF00723 Glycosyl hydrolases family 15 EBA01_20875 PF05166 YcgL domain EBA01_20880 PF00109 Beta-ketoacyl synthase, N-terminal domain EBA01_20880 PF02801 Beta-ketoacyl synthase, C-terminal domain EBA01_20890 PF00535 Glycosyl transferase family 2 EBA01_20900 PF05598 Transposase domain (DUF772) EBA01_20935 PF07977 FabA-like domain EBA01_20940 PF01553 Acyltransferase EBA01_20950 PF00550 Phosphopantetheine attachment site EBA01_20955 PF04820 Tryptophan halogenase EBA01_20995 PF01218 Coproporphyrinogen III oxidase EBA01_21010 PF00476 DNA polymerase family A EBA01_21010 PF01367 5'-3' exonuclease, C-terminal SAM fold EBA01_21010 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EBA01_21010 PF01612 3'-5' exonuclease EBA01_21060 PF12464 Maltose acetyltransferase EBA01_21060 PF14602 Hexapeptide repeat of succinyl-transferase EBA01_21070 PF00580 UvrD/REP helicase N-terminal domain EBA01_21070 PF13361 UvrD-like helicase C-terminal domain EBA01_21090 PF13396 Phospholipase_D-nuclease N-terminal EBA01_21090 PF13091 PLD-like domain EBA01_21095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA01_21100 PF05598 Transposase domain (DUF772) EBA01_21105 PF03737 Aldolase/RraA EBA01_21120 PF04909 Amidohydrolase EBA01_21125 PF00471 Ribosomal protein L33 EBA01_21130 PF00830 Ribosomal L28 family EBA01_21150 PF02527 rRNA small subunit methyltransferase G EBA01_21155 PF09423 PhoD-like phosphatase EBA01_21155 PF16655 PhoD-like phosphatase, N-terminal domain EBA01_21165 PF01648 4'-phosphopantetheinyl transferase superfamily EBA01_21170 PF04226 Transglycosylase associated protein EBA01_21180 PF03372 Endonuclease/Exonuclease/phosphatase family EBA01_21195 PF00474 Sodium:solute symporter family EBA01_21200 PF04341 Protein of unknown function, DUF485 EBA01_21210 PF16177 Acetyl-coenzyme A synthetase N-terminus EBA01_21210 PF00501 AMP-binding enzyme EBA01_21210 PF13193 AMP-binding enzyme C-terminal domain EBA01_21215 PF00072 Response regulator receiver domain EBA01_21215 PF00196 Bacterial regulatory proteins, luxR family EBA01_21245 PF00248 Aldo/keto reductase family EBA01_21260 PF01557 Fumarylacetoacetate (FAA) hydrolase family EBA01_21270 PF13378 Enolase C-terminal domain-like EBA01_21270 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EBA01_21280 PF01609 Transposase DDE domain EBA01_21280 PF05598 Transposase domain (DUF772) EBA01_21285 PF05336 L-rhamnose mutarotase EBA01_21290 PF07690 Major Facilitator Superfamily EBA01_21295 PF09339 IclR helix-turn-helix domain EBA01_21295 PF01614 Bacterial transcriptional regulator EBA01_21300 PF02659 Putative manganese efflux pump EBA01_21305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA01_21305 PF00512 His Kinase A (phospho-acceptor) domain EBA01_21315 PF06165 Glycosyltransferase family 36 EBA01_21315 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain EBA01_21330 PF13360 PQQ-like domain EBA01_21330 PF01011 PQQ enzyme repeat EBA01_21330 PF13570 PQQ-like domain EBA01_21365 PF05598 Transposase domain (DUF772) EBA01_21365 PF01609 Transposase DDE domain EBA01_21375 PF05598 Transposase domain (DUF772) EBA01_21375 PF01609 Transposase DDE domain EBA01_21380 PF04357 TamB, inner membrane protein subunit of TAM complex EBA01_21385 PF17243 POTRA domain TamA domain 1 EBA01_21385 PF01103 Surface antigen EBA01_21390 PF07715 TonB-dependent Receptor Plug Domain EBA01_21390 PF00593 TonB dependent receptor EBA01_21395 PF13181 Tetratricopeptide repeat EBA01_21400 PF05746 DALR anticodon binding domain EBA01_21400 PF02092 Glycyl-tRNA synthetase beta subunit EBA01_21405 PF02091 Glycyl-tRNA synthetase alpha subunit EBA01_21410 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EBA01_21410 PF00437 Type II/IV secretion system protein EBA01_21420 PF00958 GMP synthase C terminal domain EBA01_21420 PF00117 Glutamine amidotransferase class-I EBA01_21430 PF00902 Sec-independent protein translocase protein (TatC) EBA01_21435 PF02416 mttA/Hcf106 family EBA01_21440 PF02416 mttA/Hcf106 family EBA01_21450 PF00762 Ferrochelatase EBA01_21455 PF12697 Alpha/beta hydrolase family EBA01_21480 PF04381 Putative exonuclease, RdgC EBA01_21485 PF01171 PP-loop family EBA01_21505 PF00356 Bacterial regulatory proteins, lacI family EBA01_21510 PF03648 Glycosyl hydrolase family 67 N-terminus EBA01_21510 PF07488 Glycosyl hydrolase family 67 middle domain EBA01_21510 PF07477 Glycosyl hydrolase family 67 C-terminus EBA01_21520 PF13378 Enolase C-terminal domain-like EBA01_21520 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EBA01_21525 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain EBA01_21525 PF04616 Glycosyl hydrolases family 43 EBA01_21540 PF08125 Mannitol dehydrogenase C-terminal domain EBA01_21540 PF01232 Mannitol dehydrogenase Rossmann domain EBA01_21550 PF05598 Transposase domain (DUF772) EBA01_21575 PF00665 Integrase core domain EBA01_21575 PF13936 Helix-turn-helix domain EBA01_21580 PF05598 Transposase domain (DUF772) EBA01_21600 PF02614 Glucuronate isomerase EBA01_21605 PF00553 Cellulose binding domain EBA01_21605 PF03422 Carbohydrate binding module (family 6) EBA01_21605 PF00331 Glycosyl hydrolase family 10 EBA01_21635 PF04616 Glycosyl hydrolases family 43 EBA01_21645 PF01609 Transposase DDE domain EBA01_21645 PF05598 Transposase domain (DUF772) EBA01_21675 PF08240 Alcohol dehydrogenase GroES-like domain EBA01_21675 PF00109 Beta-ketoacyl synthase, N-terminal domain EBA01_21675 PF00698 Acyl transferase domain EBA01_21675 PF16197 Ketoacyl-synthetase C-terminal extension EBA01_21675 PF02801 Beta-ketoacyl synthase, C-terminal domain EBA01_21675 PF08659 KR domain EBA01_21675 PF00107 Zinc-binding dehydrogenase EBA01_21675 PF14765 Polyketide synthase dehydratase EBA01_21675 PF00550 Phosphopantetheine attachment site EBA01_21680 PF01553 Acyltransferase EBA01_21695 PF00356 Bacterial regulatory proteins, lacI family EBA01_21710 PF05598 Transposase domain (DUF772) EBA01_21720 PF04820 Tryptophan halogenase EBA01_21725 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EBA01_21730 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) EBA01_21735 PF04337 Protein of unknown function, DUF480 EBA01_21750 PF00580 UvrD/REP helicase N-terminal domain EBA01_21750 PF13361 UvrD-like helicase C-terminal domain EBA01_21755 PF00265 Thymidine kinase EBA01_21765 PF04349 Periplasmic glucan biosynthesis protein, MdoG EBA01_21775 PF06827 Zinc finger found in FPG and IleRS EBA01_21775 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EBA01_21775 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EBA01_21780 PF05598 Transposase domain (DUF772) EBA01_21815 PF01590 GAF domain EBA01_21815 PF13426 PAS domain EBA01_21815 PF08446 PAS fold EBA01_21815 PF00360 Phytochrome region EBA01_21820 PF01126 Heme oxygenase EBA01_21825 PF07690 Major Facilitator Superfamily EBA01_21830 PF01263 Aldose 1-epimerase EBA01_21840 PF02810 SEC-C motif EBA01_21845 PF01925 Sulfite exporter TauE/SafE EBA01_21850 PF05598 Transposase domain (DUF772) EBA01_21880 PF02463 RecF/RecN/SMC N terminal domain EBA01_21885 PF01227 GTP cyclohydrolase I EBA01_21915 PF13936 Helix-turn-helix domain EBA01_21915 PF00665 Integrase core domain EBA01_21925 PF00083 Sugar (and other) transporter EBA01_21930 PF05598 Transposase domain (DUF772) EBA01_21940 PF13091 PLD-like domain EBA01_21940 PF13396 Phospholipase_D-nuclease N-terminal EBA01_21985 PF00085 Thioredoxin EBA01_22000 PF00293 NUDIX domain EBA01_22000 PF13344 Haloacid dehalogenase-like hydrolase EBA01_22020 PF05598 Transposase domain (DUF772) EBA01_22045 PF05532 CsbD-like EBA01_22075 PF00294 pfkB family carbohydrate kinase EBA01_22085 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase EBA01_22085 PF12241 Trans-2-enoyl-CoA reductase catalytic region EBA01_22085 PF07055 Enoyl reductase FAD binding domain EBA01_22105 PF01070 FMN-dependent dehydrogenase EBA01_22120 PF05598 Transposase domain (DUF772) EBA01_22130 PF07715 TonB-dependent Receptor Plug Domain EBA01_22130 PF00593 TonB dependent receptor EBA01_22135 PF00155 Aminotransferase class I and II EBA01_22140 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain EBA01_22160 PF05598 Transposase domain (DUF772) EBA01_22165 PF05598 Transposase domain (DUF772) EBA01_22175 PF01609 Transposase DDE domain EBA01_22175 PF05598 Transposase domain (DUF772) EBA01_22195 PF03412 Peptidase C39 family EBA01_22195 PF00005 ABC transporter EBA01_22195 PF00664 ABC transporter transmembrane region EBA01_22200 PF05598 Transposase domain (DUF772) EBA01_22205 PF05598 Transposase domain (DUF772) EBA01_22230 PF00849 RNA pseudouridylate synthase EBA01_22245 PF01396 Topoisomerase DNA binding C4 zinc finger EBA01_22245 PF01751 Toprim domain EBA01_22245 PF01131 DNA topoisomerase EBA01_22280 PF05598 Transposase domain (DUF772) EBA01_22280 PF01609 Transposase DDE domain EBA01_22300 PF13936 Helix-turn-helix domain EBA01_22300 PF00665 Integrase core domain EBA01_22360 PF13538 UvrD-like helicase C-terminal domain EBA01_22365 PF00580 UvrD/REP helicase N-terminal domain EBA01_22365 PF12705 PD-(D/E)XK nuclease superfamily EBA01_22365 PF13361 UvrD-like helicase C-terminal domain EBA01_22370 PF17946 RecC C-terminal domain EBA01_22375 PF00005 ABC transporter EBA01_22385 PF01609 Transposase DDE domain EBA01_22385 PF05598 Transposase domain (DUF772) EBA01_22390 PF05598 Transposase domain (DUF772) EBA01_22390 PF01609 Transposase DDE domain EBA01_22400 PF00005 ABC transporter EBA01_22420 PF00005 ABC transporter EBA01_22425 PF02405 Permease MlaE EBA01_22430 PF02470 MlaD protein EBA01_22435 PF05494 MlaC protein EBA01_22445 PF04333 MlaA lipoprotein EBA01_22455 PF05598 Transposase domain (DUF772) EBA01_22460 PF00255 Glutathione peroxidase EBA01_22470 PF02646 RmuC family EBA01_22475 PF05598 Transposase domain (DUF772) EBA01_22475 PF01609 Transposase DDE domain EBA01_22495 PF13556 PucR C-terminal helix-turn-helix domain EBA01_22495 PF07905 Purine catabolism regulatory protein-like family EBA01_22500 PF02595 Glycerate kinase family EBA01_22505 PF07690 Major Facilitator Superfamily EBA01_22520 PF10672 S-adenosylmethionine-dependent methyltransferase EBA01_22520 PF17785 PUA-like domain EBA01_22530 PF03741 Integral membrane protein TerC family EBA01_22535 PF01694 Rhomboid family EBA01_22540 PF03009 Glycerophosphoryl diester phosphodiesterase family EBA01_22550 PF01569 PAP2 superfamily EBA01_22555 PF10396 GTP-binding protein TrmE N-terminus EBA01_22555 PF01926 50S ribosome-binding GTPase EBA01_22555 PF12631 MnmE helical domain EBA01_22560 PF01522 Polysaccharide deacetylase EBA01_22565 PF14849 YidC periplasmic domain EBA01_22565 PF02096 60Kd inner membrane protein EBA01_22570 PF00825 Ribonuclease P EBA01_22575 PF00468 Ribosomal protein L34