locus-tag class description EBA04_00010 PF11638 DnaA N-terminal domain EBA04_00010 PF08299 Bacterial dnaA protein helix-turn-helix EBA04_00010 PF00308 Bacterial dnaA protein EBA04_00015 PF02768 DNA polymerase III beta subunit, C-terminal domain EBA04_00015 PF02767 DNA polymerase III beta subunit, central domain EBA04_00015 PF00712 DNA polymerase III beta subunit, N-terminal domain EBA04_00020 PF02463 RecF/RecN/SMC N terminal domain EBA04_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_00025 PF00204 DNA gyrase B EBA04_00025 PF00986 DNA gyrase B subunit, carboxyl terminus EBA04_00025 PF01751 Toprim domain EBA04_00025 PF18053 DNA gyrase B subunit insert domain EBA04_00035 PF01435 Peptidase family M48 EBA04_00045 PF03544 Gram-negative bacterial TonB protein C-terminal EBA04_00050 PF01618 MotA/TolQ/ExbB proton channel family EBA04_00055 PF02472 Biopolymer transport protein ExbD/TolR EBA04_00060 PF02472 Biopolymer transport protein ExbD/TolR EBA04_00065 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ EBA04_00090 PF05598 Transposase domain (DUF772) EBA04_00095 PF01609 Transposase DDE domain EBA04_00095 PF05598 Transposase domain (DUF772) EBA04_00110 PF04055 Radical SAM superfamily EBA04_00120 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) EBA04_00145 PF13180 PDZ domain EBA04_00145 PF03572 Peptidase family S41 EBA04_00150 PF01551 Peptidase family M23 EBA04_00160 PF04389 Peptidase family M28 EBA04_00170 PF00150 Cellulase (glycosyl hydrolase family 5) EBA04_00185 PF00150 Cellulase (glycosyl hydrolase family 5) EBA04_00195 PF00150 Cellulase (glycosyl hydrolase family 5) EBA04_00205 PF00107 Zinc-binding dehydrogenase EBA04_00205 PF08240 Alcohol dehydrogenase GroES-like domain EBA04_00230 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA04_00230 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EBA04_00235 PF00310 Glutamine amidotransferases class-II EBA04_00235 PF04898 Glutamate synthase central domain EBA04_00235 PF01645 Conserved region in glutamate synthase EBA04_00235 PF01493 GXGXG motif EBA04_00305 PF00271 Helicase conserved C-terminal domain EBA04_00305 PF09369 Domain of unknown function (DUF1998) EBA04_00305 PF00270 DEAD/DEAH box helicase EBA04_00310 PF03006 Haemolysin-III related EBA04_00340 PF00080 Copper/zinc superoxide dismutase (SODC) EBA04_00345 PF02954 Bacterial regulatory protein, Fis family EBA04_00345 PF00072 Response regulator receiver domain EBA04_00345 PF00158 Sigma-54 interaction domain EBA04_00350 PF00512 His Kinase A (phospho-acceptor) domain EBA04_00350 PF00989 PAS fold EBA04_00350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_00355 PF00909 Ammonium Transporter Family EBA04_00360 PF00543 Nitrogen regulatory protein P-II EBA04_00365 PF03951 Glutamine synthetase, beta-Grasp domain EBA04_00365 PF00120 Glutamine synthetase, catalytic domain EBA04_00370 PF02673 Bacitracin resistance protein BacA EBA04_00415 PF03061 Thioesterase superfamily EBA04_00420 PF13091 PLD-like domain EBA04_00435 PF10609 NUBPL iron-transfer P-loop NTPase EBA04_00435 PF01883 Iron-sulfur cluster assembly protein EBA04_00455 PF01381 Helix-turn-helix EBA04_00460 PF07804 HipA-like C-terminal domain EBA04_00460 PF13657 HipA N-terminal domain EBA04_00465 PF10017 Histidine-specific methyltransferase, SAM-dependent EBA04_00470 PF03781 Sulfatase-modifying factor enzyme 1 EBA04_00470 PF12867 DinB superfamily EBA04_00480 PF00528 Binding-protein-dependent transport system inner membrane component EBA04_00485 PF00571 CBS domain EBA04_00485 PF00005 ABC transporter EBA04_00500 PF00005 ABC transporter EBA04_00515 PF01734 Patatin-like phospholipase EBA04_00525 PF01037 Lrp/AsnC ligand binding domain EBA04_00530 PF00351 Biopterin-dependent aromatic amino acid hydroxylase EBA04_00560 PF00356 Bacterial regulatory proteins, lacI family EBA04_00595 PF02806 Alpha amylase, C-terminal all-beta domain EBA04_00595 PF00128 Alpha amylase, catalytic domain EBA04_00595 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EBA04_00600 PF16657 Maltogenic Amylase, C-terminal domain EBA04_00600 PF00128 Alpha amylase, catalytic domain EBA04_00605 PF11896 Domain of unknown function (DUF3416) EBA04_00605 PF00128 Alpha amylase, catalytic domain EBA04_00615 PF01609 Transposase DDE domain EBA04_00615 PF05598 Transposase domain (DUF772) EBA04_00625 PF02803 Thiolase, C-terminal domain EBA04_00625 PF00108 Thiolase, N-terminal domain EBA04_00665 PF00581 Rhodanese-like domain EBA04_00670 PF02556 Preprotein translocase subunit SecB EBA04_00675 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EBA04_00675 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EBA04_00685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EBA04_00685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EBA04_00685 PF00205 Thiamine pyrophosphate enzyme, central domain EBA04_00690 PF00512 His Kinase A (phospho-acceptor) domain EBA04_00690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_00695 PF00072 Response regulator receiver domain EBA04_00695 PF02954 Bacterial regulatory protein, Fis family EBA04_00695 PF00158 Sigma-54 interaction domain EBA04_00710 PF07690 Major Facilitator Superfamily EBA04_00715 PF01609 Transposase DDE domain EBA04_00715 PF05598 Transposase domain (DUF772) EBA04_00725 PF00588 SpoU rRNA Methylase family EBA04_00740 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EBA04_00740 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EBA04_00745 PF02661 Fic/DOC family EBA04_00745 PF13784 Fic/DOC family N-terminal EBA04_00750 PF00561 alpha/beta hydrolase fold EBA04_00760 PF03692 Putative zinc- or iron-chelating domain EBA04_00765 PF00501 AMP-binding enzyme EBA04_00770 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family EBA04_00785 PF01820 D-ala D-ala ligase N-terminus EBA04_00785 PF07478 D-ala D-ala ligase C-terminus EBA04_00800 PF03109 ABC1 family EBA04_00815 PF00849 RNA pseudouridylate synthase EBA04_00825 PF00472 RF-1 domain EBA04_00845 PF01432 Peptidase family M3 EBA04_00885 PF00326 Prolyl oligopeptidase family EBA04_00890 PF00364 Biotin-requiring enzyme EBA04_00890 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EBA04_00890 PF02785 Biotin carboxylase C-terminal domain EBA04_00890 PF00289 Biotin carboxylase, N-terminal domain EBA04_00900 PF01039 Carboxyl transferase domain EBA04_00905 PF02770 Acyl-CoA dehydrogenase, middle domain EBA04_00905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EBA04_00905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EBA04_00950 PF07683 Cobalamin synthesis protein cobW C-terminal domain EBA04_00950 PF02492 CobW/HypB/UreG, nucleotide-binding domain EBA04_00970 PF03969 AFG1-like ATPase EBA04_00975 PF01047 MarR family EBA04_00980 PF02566 OsmC-like protein EBA04_01000 PF03377 TAL effector repeat EBA04_01005 PF04717 Type VI secretion system, phage-baseplate injector EBA04_01005 PF16671 Actin cross-linking domain EBA04_01030 PF00248 Aldo/keto reductase family EBA04_01045 PF00107 Zinc-binding dehydrogenase EBA04_01045 PF16884 N-terminal domain of oxidoreductase EBA04_01060 PF00849 RNA pseudouridylate synthase EBA04_01075 PF00270 DEAD/DEAH box helicase EBA04_01075 PF04408 Helicase associated domain (HA2) EBA04_01075 PF08482 ATP-dependent helicase C-terminal EBA04_01075 PF00271 Helicase conserved C-terminal domain EBA04_01085 PF07308 Protein of unknown function (DUF1456) EBA04_01090 PF13454 FAD-NAD(P)-binding EBA04_01110 PF00266 Aminotransferase class-V EBA04_01115 PF07687 Peptidase dimerisation domain EBA04_01115 PF01546 Peptidase family M20/M25/M40 EBA04_01155 PF01609 Transposase DDE domain EBA04_01155 PF05598 Transposase domain (DUF772) EBA04_01200 PF01026 TatD related DNase EBA04_01220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA04_01220 PF03466 LysR substrate binding domain EBA04_01225 PF07690 Major Facilitator Superfamily EBA04_01235 PF02146 Sir2 family EBA04_01240 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EBA04_01245 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EBA04_01245 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EBA04_01265 PF00551 Formyl transferase EBA04_01270 PF00072 Response regulator receiver domain EBA04_01270 PF00486 Transcriptional regulatory protein, C terminal EBA04_01290 PF02677 Epoxyqueuosine reductase QueH EBA04_01295 PF03466 LysR substrate binding domain EBA04_01295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA04_01300 PF03358 NADPH-dependent FMN reductase EBA04_01310 PF08267 Cobalamin-independent synthase, N-terminal domain EBA04_01310 PF01717 Cobalamin-independent synthase, Catalytic domain EBA04_01315 PF03812 2-keto-3-deoxygluconate permease EBA04_01325 PF05368 NmrA-like family EBA04_01330 PF01638 HxlR-like helix-turn-helix EBA04_01365 PF01609 Transposase DDE domain EBA04_01365 PF05598 Transposase domain (DUF772) EBA04_01380 PF03377 TAL effector repeat EBA04_01385 PF16671 Actin cross-linking domain EBA04_01385 PF04717 Type VI secretion system, phage-baseplate injector EBA04_01390 PF13495 Phage integrase, N-terminal SAM-like domain EBA04_01390 PF00589 Phage integrase family EBA04_01395 PF05598 Transposase domain (DUF772) EBA04_01400 PF00920 Dehydratase family EBA04_01405 PF03692 Putative zinc- or iron-chelating domain EBA04_01410 PF00132 Bacterial transferase hexapeptide (six repeats) EBA04_01415 PF07690 Major Facilitator Superfamily EBA04_01420 PF01966 HD domain EBA04_01420 PF11871 Domain of unknown function (DUF3391) EBA04_01450 PF01494 FAD binding domain EBA04_01470 PF00175 Oxidoreductase NAD-binding domain EBA04_01470 PF00111 2Fe-2S iron-sulfur cluster binding domain EBA04_01475 PF00355 Rieske [2Fe-2S] domain EBA04_01480 PF01144 Coenzyme A transferase EBA04_01485 PF01144 Coenzyme A transferase EBA04_01490 PF00108 Thiolase, N-terminal domain EBA04_01490 PF02803 Thiolase, C-terminal domain EBA04_01495 PF00775 Dioxygenase EBA04_01495 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal EBA04_01510 PF10397 Adenylosuccinate lyase C-terminus EBA04_01510 PF00206 Lyase EBA04_01515 PF12146 Serine aminopeptidase, S33 EBA04_01520 PF02627 Carboxymuconolactone decarboxylase family EBA04_01535 PF09339 IclR helix-turn-helix domain EBA04_01535 PF01614 Bacterial transcriptional regulator EBA04_01560 PF01134 Glucose inhibited division protein A EBA04_01560 PF13932 GidA associated domain EBA04_01575 PF00291 Pyridoxal-phosphate dependent enzyme EBA04_01595 PF13649 Methyltransferase domain EBA04_01605 PF12697 Alpha/beta hydrolase family EBA04_01615 PF00155 Aminotransferase class I and II EBA04_01620 PF06968 Biotin and Thiamin Synthesis associated domain EBA04_01620 PF04055 Radical SAM superfamily EBA04_01630 PF01040 UbiA prenyltransferase family EBA04_01650 PF05819 NolX protein EBA04_01710 PF01313 Bacterial export proteins, family 3 EBA04_01715 PF00813 FliP family EBA04_01730 PF00771 FHIPEP family EBA04_01735 PF01312 FlhB HrpN YscU SpaS Family EBA04_01750 PF01514 Secretory protein of YscJ/FliF family EBA04_01765 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EBA04_01765 PF02874 ATP synthase alpha/beta family, beta-barrel domain EBA04_01765 PF18269 T3SS EscN ATPase C-terminal domain EBA04_01775 PF01311 Bacterial export proteins, family 1 EBA04_01790 PF01464 Transglycosylase SLT domain EBA04_01810 PF00924 Mechanosensitive ion channel EBA04_01810 PF12795 Mechanosensitive ion channel porin domain EBA04_01810 PF12794 Mechanosensitive ion channel inner membrane domain 1 EBA04_01820 PF01609 Transposase DDE domain EBA04_01820 PF05598 Transposase domain (DUF772) EBA04_01825 PF03109 ABC1 family EBA04_01835 PF05661 Protein of unknown function (DUF808) EBA04_01845 PF00072 Response regulator receiver domain EBA04_01845 PF00990 Diguanylate cyclase, GGDEF domain EBA04_01850 PF00534 Glycosyl transferases group 1 EBA04_01850 PF08323 Starch synthase catalytic domain EBA04_01855 PF00128 Alpha amylase, catalytic domain EBA04_01855 PF02806 Alpha amylase, C-terminal all-beta domain EBA04_01855 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EBA04_01860 PF00128 Alpha amylase, catalytic domain EBA04_01860 PF11941 Domain of unknown function (DUF3459) EBA04_01860 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EBA04_01865 PF02446 4-alpha-glucanotransferase EBA04_01870 PF00128 Alpha amylase, catalytic domain EBA04_01880 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EBA04_01880 PF00128 Alpha amylase, catalytic domain EBA04_01885 PF13460 NAD(P)H-binding EBA04_01890 PF05598 Transposase domain (DUF772) EBA04_01915 PF06903 VirK protein EBA04_01920 PF05598 Transposase domain (DUF772) EBA04_01925 PF05598 Transposase domain (DUF772) EBA04_01940 PF00270 DEAD/DEAH box helicase EBA04_01940 PF00271 Helicase conserved C-terminal domain EBA04_01950 PF01609 Transposase DDE domain EBA04_01950 PF05598 Transposase domain (DUF772) EBA04_01965 PF02817 e3 binding domain EBA04_01965 PF00364 Biotin-requiring enzyme EBA04_01965 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EBA04_01975 PF02780 Transketolase, C-terminal domain EBA04_01975 PF02779 Transketolase, pyrimidine binding domain EBA04_01980 PF00676 Dehydrogenase E1 component EBA04_01990 PF03301 Tryptophan 2,3-dioxygenase EBA04_01995 PF00854 POT family EBA04_02005 PF01047 MarR family EBA04_02010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EBA04_02015 PF04209 homogentisate 1,2-dioxygenase EBA04_02025 PF03334 Na+/H+ antiporter subunit EBA04_02030 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) EBA04_02040 PF00361 Proton-conducting membrane transporter EBA04_02045 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EBA04_02050 PF13244 Domain of unknown function (DUF4040) EBA04_02050 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EBA04_02050 PF00361 Proton-conducting membrane transporter EBA04_02050 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter EBA04_02080 PF01259 SAICAR synthetase EBA04_02085 PF00226 DnaJ domain EBA04_02085 PF05099 Tellurite resistance protein TerB EBA04_02090 PF00834 Ribulose-phosphate 3 epimerase family EBA04_02095 PF00583 Acetyltransferase (GNAT) family EBA04_02100 PF00781 Diacylglycerol kinase catalytic domain EBA04_02105 PF00425 chorismate binding enzyme EBA04_02105 PF04715 Anthranilate synthase component I, N terminal region EBA04_02120 PF00117 Glutamine amidotransferase class-I EBA04_02135 PF02885 Glycosyl transferase family, helical bundle domain EBA04_02135 PF00591 Glycosyl transferase family, a/b domain EBA04_02140 PF00218 Indole-3-glycerol phosphate synthase EBA04_02150 PF00325 Bacterial regulatory proteins, crp family EBA04_02150 PF00027 Cyclic nucleotide-binding domain EBA04_02155 PF02675 S-adenosylmethionine decarboxylase EBA04_02160 PF00893 Small Multidrug Resistance protein EBA04_02165 PF03232 Ubiquinone biosynthesis protein COQ7 EBA04_02170 PF00572 Ribosomal protein L13 EBA04_02175 PF00380 Ribosomal protein S9/S16 EBA04_02190 PF00293 NUDIX domain EBA04_02195 PF04324 BFD-like [2Fe-2S] binding domain EBA04_02200 PF00210 Ferritin-like domain EBA04_02205 PF00072 Response regulator receiver domain EBA04_02205 PF01627 Hpt domain EBA04_02205 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EBA04_02205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_02205 PF00672 HAMP domain EBA04_02205 PF00512 His Kinase A (phospho-acceptor) domain EBA04_02210 PF00563 EAL domain EBA04_02210 PF00990 Diguanylate cyclase, GGDEF domain EBA04_02210 PF03707 Bacterial signalling protein N terminal repeat EBA04_02230 PF01521 Iron-sulphur cluster biosynthesis EBA04_02240 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain EBA04_02240 PF09297 NADH pyrophosphatase zinc ribbon domain EBA04_02240 PF00293 NUDIX domain EBA04_02245 PF03186 CobD/Cbib protein EBA04_02245 PF17113 Regulatory signalling modulator protein AmpE EBA04_02265 PF07690 Major Facilitator Superfamily EBA04_02275 PF07690 Major Facilitator Superfamily EBA04_02280 PF12805 FUSC-like inner membrane protein yccS EBA04_02290 PF02843 Phosphoribosylglycinamide synthetase, C domain EBA04_02290 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EBA04_02290 PF02844 Phosphoribosylglycinamide synthetase, N domain EBA04_02295 PF01808 AICARFT/IMPCHase bienzyme EBA04_02295 PF02142 MGS-like domain EBA04_02300 PF01066 CDP-alcohol phosphatidyltransferase EBA04_02310 PF02954 Bacterial regulatory protein, Fis family EBA04_02325 PF01381 Helix-turn-helix EBA04_02365 PF02785 Biotin carboxylase C-terminal domain EBA04_02365 PF00289 Biotin carboxylase, N-terminal domain EBA04_02365 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EBA04_02375 PF00364 Biotin-requiring enzyme EBA04_02380 PF01220 Dehydroquinase class II EBA04_02390 PF11412 Disulphide bond corrector protein DsbC EBA04_02390 PF02683 Cytochrome C biogenesis protein transmembrane region EBA04_02395 PF03091 CutA1 divalent ion tolerance protein EBA04_02415 PF00271 Helicase conserved C-terminal domain EBA04_02415 PF00270 DEAD/DEAH box helicase EBA04_02415 PF18319 PriA DNA helicase Cys-rich region (CRR) domain EBA04_02415 PF18074 Primosomal protein N C-terminal domain EBA04_02415 PF17764 3′ DNA-binding domain (3′BD) EBA04_02435 PF01554 MatE EBA04_02440 PF01343 Peptidase family S49 EBA04_02465 PF01300 Telomere recombination EBA04_02470 PF13368 Topoisomerase C-terminal repeat EBA04_02470 PF01131 DNA topoisomerase EBA04_02470 PF01751 Toprim domain EBA04_02480 PF07963 Prokaryotic N-terminal methylation motif EBA04_02480 PF00114 Pilin (bacterial filament) EBA04_02485 PF04361 Protein of unknown function (DUF494) EBA04_02490 PF02481 DNA recombination-mediator protein A EBA04_02490 PF17782 DprA winged helix domain EBA04_02495 PF01476 LysM domain EBA04_02500 PF01327 Polypeptide deformylase EBA04_02505 PF02911 Formyl transferase, C-terminal domain EBA04_02505 PF00551 Formyl transferase EBA04_02510 PF01189 16S rRNA methyltransferase RsmB/F EBA04_02510 PF01029 NusB family EBA04_02525 PF00535 Glycosyl transferase family 2 EBA04_02545 PF00925 GTP cyclohydrolase II EBA04_02560 PF03279 Bacterial lipid A biosynthesis acyltransferase EBA04_02565 PF02580 D-Tyr-tRNA(Tyr) deacylase EBA04_02570 PF04545 Sigma-70, region 4 EBA04_02570 PF00140 Sigma-70 factor, region 1.2 EBA04_02570 PF04539 Sigma-70 region 3 EBA04_02570 PF04542 Sigma-70 region 2 EBA04_02570 PF04546 Sigma-70, non-essential region EBA04_02570 PF03979 Sigma-70 factor, region 1.1 EBA04_02600 PF07498 Rho termination factor, N-terminal domain EBA04_02600 PF07497 Rho termination factor, RNA-binding domain EBA04_02600 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EBA04_02605 PF00085 Thioredoxin EBA04_02610 PF00270 DEAD/DEAH box helicase EBA04_02610 PF12300 ATP-dependent RNA helicase RhlB EBA04_02610 PF00271 Helicase conserved C-terminal domain EBA04_02615 PF00005 ABC transporter EBA04_02620 PF18075 FtsX extracellular domain EBA04_02625 PF00072 Response regulator receiver domain EBA04_02630 PF03167 Uracil DNA glycosylase superfamily EBA04_02635 PF04542 Sigma-70 region 2 EBA04_02635 PF04545 Sigma-70, region 4 EBA04_02640 PF03458 UPF0126 domain EBA04_02645 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA04_02665 PF00166 Chaperonin 10 Kd subunit EBA04_02670 PF00118 TCP-1/cpn60 chaperonin family EBA04_02685 PF05598 Transposase domain (DUF772) EBA04_02685 PF01609 Transposase DDE domain EBA04_02695 PF01609 Transposase DDE domain EBA04_02695 PF05598 Transposase domain (DUF772) EBA04_02705 PF00793 DAHP synthetase I family EBA04_02720 PF08450 SMP-30/Gluconolactonase/LRE-like region EBA04_02730 PF08335 GlnD PII-uridylyltransferase EBA04_02730 PF03710 Glutamate-ammonia ligase adenylyltransferase EBA04_02735 PF02592 Putative vitamin uptake transporter EBA04_02745 PF05598 Transposase domain (DUF772) EBA04_02775 PF00881 Nitroreductase family EBA04_02780 PF04264 YceI-like domain EBA04_02805 PF00456 Transketolase, thiamine diphosphate binding domain EBA04_02805 PF17831 Pyruvate dehydrogenase E1 component middle domain EBA04_02815 PF05598 Transposase domain (DUF772) EBA04_02830 PF05598 Transposase domain (DUF772) EBA04_02835 PF04717 Type VI secretion system, phage-baseplate injector EBA04_02835 PF16671 Actin cross-linking domain EBA04_02860 PF05598 Transposase domain (DUF772) EBA04_02885 PF03377 TAL effector repeat EBA04_02895 PF00106 short chain dehydrogenase EBA04_02935 PF07759 Protein of unknown function (DUF1615) EBA04_02950 PF00892 EamA-like transporter family EBA04_02955 PF03330 Lytic transglycolase EBA04_02960 PF00553 Cellulose binding domain EBA04_02960 PF00041 Fibronectin type III domain EBA04_02960 PF01341 Glycosyl hydrolases family 6 EBA04_02970 PF00324 Amino acid permease EBA04_02980 PF01544 CorA-like Mg2+ transporter protein EBA04_03015 PF05598 Transposase domain (DUF772) EBA04_03025 PF01204 Trehalase EBA04_03060 PF00563 EAL domain EBA04_03060 PF00990 Diguanylate cyclase, GGDEF domain EBA04_03060 PF03707 Bacterial signalling protein N terminal repeat EBA04_03060 PF13188 PAS domain EBA04_03085 PF00553 Cellulose binding domain EBA04_03085 PF00150 Cellulase (glycosyl hydrolase family 5) EBA04_03090 PF00916 Sulfate permease family EBA04_03090 PF01740 STAS domain EBA04_03095 PF08448 PAS fold EBA04_03095 PF00990 Diguanylate cyclase, GGDEF domain EBA04_03115 PF13632 Glycosyl transferase family group 2 EBA04_03125 PF06580 Histidine kinase EBA04_03125 PF07694 5TMR of 5TMR-LYT EBA04_03130 PF04397 LytTr DNA-binding domain EBA04_03130 PF00072 Response regulator receiver domain EBA04_03135 PF03900 Porphobilinogen deaminase, C-terminal domain EBA04_03135 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain EBA04_03160 PF00326 Prolyl oligopeptidase family EBA04_03160 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain EBA04_03170 PF00155 Aminotransferase class I and II EBA04_03175 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain EBA04_03175 PF00326 Prolyl oligopeptidase family EBA04_03180 PF04304 Protein of unknown function (DUF454) EBA04_03190 PF01678 Diaminopimelate epimerase EBA04_03200 PF00589 Phage integrase family EBA04_03200 PF02899 Phage integrase, N-terminal SAM-like domain EBA04_03210 PF00227 Proteasome subunit EBA04_03215 PF10431 C-terminal, D2-small domain, of ClpB protein EBA04_03215 PF07724 AAA domain (Cdc48 subfamily) EBA04_03215 PF00004 ATPase family associated with various cellular activities (AAA) EBA04_03225 PF13673 Acetyltransferase (GNAT) domain EBA04_03240 PF01209 ubiE/COQ5 methyltransferase family EBA04_03245 PF00563 EAL domain EBA04_03245 PF00990 Diguanylate cyclase, GGDEF domain EBA04_03245 PF03707 Bacterial signalling protein N terminal repeat EBA04_03250 PF01433 Peptidase family M1 domain EBA04_03250 PF11838 ERAP1-like C-terminal domain EBA04_03265 PF00294 pfkB family carbohydrate kinase EBA04_03275 PF04085 rod shape-determining protein MreC EBA04_03285 PF03717 Penicillin-binding Protein dimerisation domain EBA04_03285 PF00905 Penicillin binding protein transpeptidase domain EBA04_03290 PF01098 Cell cycle protein EBA04_03310 PF00295 Glycosyl hydrolases family 28 EBA04_03315 PF13406 Transglycosylase SLT domain EBA04_03320 PF05036 Sporulation related domain EBA04_03320 PF03330 Lytic transglycolase EBA04_03325 PF07943 Penicillin-binding protein 5, C-terminal domain EBA04_03325 PF00768 D-alanyl-D-alanine carboxypeptidase EBA04_03340 PF04359 Protein of unknown function (DUF493) EBA04_03345 PF03099 Biotin/lipoate A/B protein ligase family EBA04_03350 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family EBA04_03350 PF04055 Radical SAM superfamily EBA04_03355 PF03572 Peptidase family S41 EBA04_03355 PF17804 Tail specific protease N-terminal domain EBA04_03355 PF11818 C-terminal domain of tail specific protease (DUF3340) EBA04_03355 PF00595 PDZ domain EBA04_03365 PF01467 Cytidylyltransferase-like EBA04_03365 PF00293 NUDIX domain EBA04_03400 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EBA04_03400 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EBA04_03405 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EBA04_03405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EBA04_03410 PF04972 BON domain EBA04_03415 PF00360 Phytochrome region EBA04_03415 PF08446 PAS fold EBA04_03415 PF00512 His Kinase A (phospho-acceptor) domain EBA04_03415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_03415 PF01590 GAF domain EBA04_03420 PF00072 Response regulator receiver domain EBA04_03425 PF00512 His Kinase A (phospho-acceptor) domain EBA04_03425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_03430 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EBA04_03455 PF05598 Transposase domain (DUF772) EBA04_03455 PF01609 Transposase DDE domain EBA04_03475 PF02836 Glycosyl hydrolases family 2, TIM barrel domain EBA04_03475 PF00703 Glycosyl hydrolases family 2 EBA04_03475 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 EBA04_03475 PF16355 Domain of unknown function (DUF4982) EBA04_03475 PF02837 Glycosyl hydrolases family 2, sugar binding domain EBA04_03495 PF07690 Major Facilitator Superfamily EBA04_03500 PF00356 Bacterial regulatory proteins, lacI family EBA04_03505 PF01380 SIS domain EBA04_03510 PF01979 Amidohydrolase family EBA04_03525 PF00535 Glycosyl transferase family 2 EBA04_03530 PF14883 Hypothetical glycosyl hydrolase family 13 EBA04_03530 PF01522 Polysaccharide deacetylase EBA04_03545 PF12627 Probable RNA and SrmB- binding site of polymerase A EBA04_03545 PF01743 Poly A polymerase head domain EBA04_03545 PF01966 HD domain EBA04_03550 PF01609 Transposase DDE domain EBA04_03550 PF05598 Transposase domain (DUF772) EBA04_03590 PF00034 Cytochrome c EBA04_03595 PF01926 50S ribosome-binding GTPase EBA04_03605 PF04107 Glutamate-cysteine ligase family 2(GCS2) EBA04_03635 PF00672 HAMP domain EBA04_03635 PF16527 Two-component sensor protein CpxA, periplasmic domain EBA04_03635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_03635 PF00512 His Kinase A (phospho-acceptor) domain EBA04_03640 PF00486 Transcriptional regulatory protein, C terminal EBA04_03640 PF00072 Response regulator receiver domain EBA04_03655 PF02583 Metal-sensitive transcriptional repressor EBA04_03660 PF00107 Zinc-binding dehydrogenase EBA04_03660 PF08240 Alcohol dehydrogenase GroES-like domain EBA04_03665 PF04828 Glutathione-dependent formaldehyde-activating enzyme EBA04_03670 PF00756 Putative esterase EBA04_03680 PF01609 Transposase DDE domain EBA04_03680 PF05598 Transposase domain (DUF772) EBA04_03695 PF12848 ABC transporter EBA04_03695 PF00005 ABC transporter EBA04_03715 PF00464 Serine hydroxymethyltransferase EBA04_03725 PF03477 ATP cone domain EBA04_03735 PF01872 RibD C-terminal domain EBA04_03735 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EBA04_03745 PF00677 Lumazine binding domain EBA04_03750 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EBA04_03750 PF00925 GTP cyclohydrolase II EBA04_03755 PF00885 6,7-dimethyl-8-ribityllumazine synthase EBA04_03760 PF01029 NusB family EBA04_03765 PF02769 AIR synthase related protein, C-terminal domain EBA04_03765 PF00586 AIR synthase related protein, N-terminal domain EBA04_03780 PF05598 Transposase domain (DUF772) EBA04_03795 PF03814 Potassium-transporting ATPase A subunit EBA04_03805 PF02669 K+-transporting ATPase, c chain EBA04_03810 PF13492 GAF domain EBA04_03810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_03810 PF13493 Domain of unknown function (DUF4118) EBA04_03810 PF00512 His Kinase A (phospho-acceptor) domain EBA04_03810 PF02702 Osmosensitive K+ channel His kinase sensor domain EBA04_03815 PF00486 Transcriptional regulatory protein, C terminal EBA04_03815 PF00072 Response regulator receiver domain EBA04_03845 PF02913 FAD linked oxidases, C-terminal domain EBA04_03845 PF01565 FAD binding domain EBA04_03855 PF02021 Uncharacterised protein family UPF0102 EBA04_03865 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EBA04_03890 PF02381 MraZ protein, putative antitoxin-like EBA04_03895 PF01795 MraW methylase family EBA04_03900 PF04999 Cell division protein FtsL EBA04_03905 PF03717 Penicillin-binding Protein dimerisation domain EBA04_03905 PF00905 Penicillin binding protein transpeptidase domain EBA04_03910 PF08245 Mur ligase middle domain EBA04_03910 PF02875 Mur ligase family, glutamate ligase domain EBA04_03910 PF01225 Mur ligase family, catalytic domain EBA04_03915 PF08245 Mur ligase middle domain EBA04_03915 PF01225 Mur ligase family, catalytic domain EBA04_03915 PF02875 Mur ligase family, glutamate ligase domain EBA04_03920 PF00953 Glycosyl transferase family 4 EBA04_03925 PF01098 Cell cycle protein EBA04_03930 PF04101 Glycosyltransferase family 28 C-terminal domain EBA04_03930 PF03033 Glycosyltransferase family 28 N-terminal domain EBA04_03935 PF02875 Mur ligase family, glutamate ligase domain EBA04_03935 PF08245 Mur ligase middle domain EBA04_03935 PF01225 Mur ligase family, catalytic domain EBA04_03940 PF01820 D-ala D-ala ligase N-terminus EBA04_03940 PF07478 D-ala D-ala ligase C-terminus EBA04_03945 PF08478 POTRA domain, FtsQ-type EBA04_03945 PF03799 Cell division protein FtsQ EBA04_03950 PF02491 SHS2 domain inserted in FTSA EBA04_03955 PF00091 Tubulin/FtsZ family, GTPase domain EBA04_03955 PF12327 FtsZ family, C-terminal domain EBA04_03960 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase EBA04_03970 PF01551 Peptidase family M23 EBA04_03970 PF01464 Transglycosylase SLT domain EBA04_03970 PF10145 Phage-related minor tail protein EBA04_03975 PF02810 SEC-C motif EBA04_03975 PF07516 SecA Wing and Scaffold domain EBA04_03975 PF01043 SecA preprotein cross-linking domain EBA04_03975 PF07517 SecA DEAD-like domain EBA04_03985 PF00293 NUDIX domain EBA04_04000 PF02219 Methylenetetrahydrofolate reductase EBA04_04015 PF00698 Acyl transferase domain EBA04_04015 PF00107 Zinc-binding dehydrogenase EBA04_04015 PF02801 Beta-ketoacyl synthase, C-terminal domain EBA04_04015 PF14765 Polyketide synthase dehydratase EBA04_04015 PF08240 Alcohol dehydrogenase GroES-like domain EBA04_04015 PF00550 Phosphopantetheine attachment site EBA04_04015 PF00109 Beta-ketoacyl synthase, N-terminal domain EBA04_04015 PF16197 Ketoacyl-synthetase C-terminal extension EBA04_04015 PF08659 KR domain EBA04_04020 PF09286 Pro-kumamolisin, activation domain EBA04_04020 PF00082 Subtilase family EBA04_04040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EBA04_04075 PF13649 Methyltransferase domain EBA04_04080 PF05221 S-adenosyl-L-homocysteine hydrolase EBA04_04080 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain EBA04_04090 PF00311 Phosphoenolpyruvate carboxylase EBA04_04105 PF13936 Helix-turn-helix domain EBA04_04105 PF00665 Integrase core domain EBA04_04125 PF00328 Histidine phosphatase superfamily (branch 2) EBA04_04130 PF00438 S-adenosylmethionine synthetase, N-terminal domain EBA04_04130 PF02772 S-adenosylmethionine synthetase, central domain EBA04_04130 PF02773 S-adenosylmethionine synthetase, C-terminal domain EBA04_04145 PF01207 Dihydrouridine synthase (Dus) EBA04_04155 PF00294 pfkB family carbohydrate kinase EBA04_04160 PF01773 Na+ dependent nucleoside transporter N-terminus EBA04_04160 PF07662 Na+ dependent nucleoside transporter C-terminus EBA04_04160 PF07670 Nucleoside recognition EBA04_04170 PF00248 Aldo/keto reductase family EBA04_04200 PF00005 ABC transporter EBA04_04210 PF02668 Taurine catabolism dioxygenase TauD, TfdA family EBA04_04220 PF00005 ABC transporter EBA04_04225 PF13472 GDSL-like Lipase/Acylhydrolase family EBA04_04230 PF00072 Response regulator receiver domain EBA04_04230 PF00486 Transcriptional regulatory protein, C terminal EBA04_04235 PF00512 His Kinase A (phospho-acceptor) domain EBA04_04235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_04235 PF08521 Two-component sensor kinase N-terminal EBA04_04250 PF01219 Prokaryotic diacylglycerol kinase EBA04_04270 PF01790 Prolipoprotein diacylglyceryl transferase EBA04_04275 PF00303 Thymidylate synthase EBA04_04285 PF00186 Dihydrofolate reductase EBA04_04290 PF00149 Calcineurin-like phosphoesterase EBA04_04295 PF04379 ApaG domain EBA04_04300 PF00398 Ribosomal RNA adenine dimethylase EBA04_04305 PF05598 Transposase domain (DUF772) EBA04_04315 PF04166 Pyridoxal phosphate biosynthetic protein PdxA EBA04_04320 PF00639 PPIC-type PPIASE domain EBA04_04320 PF09312 SurA N-terminal domain EBA04_04325 PF03968 OstA-like protein EBA04_04325 PF04453 LPS transport system D EBA04_04330 PF00850 Histone deacetylase domain EBA04_04335 PF01923 Cobalamin adenosyltransferase EBA04_04350 PF01494 FAD binding domain EBA04_04355 PF01494 FAD binding domain EBA04_04375 PF07729 FCD domain EBA04_04375 PF00392 Bacterial regulatory proteins, gntR family EBA04_04380 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase EBA04_04385 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase EBA04_04385 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit EBA04_04390 PF03466 LysR substrate binding domain EBA04_04390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA04_04395 PF00501 AMP-binding enzyme EBA04_04395 PF13193 AMP-binding enzyme C-terminal domain EBA04_04400 PF00171 Aldehyde dehydrogenase family EBA04_04405 PF00378 Enoyl-CoA hydratase/isomerase EBA04_04425 PF08450 SMP-30/Gluconolactonase/LRE-like region EBA04_04430 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EBA04_04430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EBA04_04435 PF18125 RlmM ferredoxin-like domain EBA04_04435 PF01728 FtsJ-like methyltransferase EBA04_04465 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain EBA04_04465 PF00749 tRNA synthetases class I (E and Q), catalytic domain EBA04_04475 PF00196 Bacterial regulatory proteins, luxR family EBA04_04475 PF00072 Response regulator receiver domain EBA04_04485 PF01625 Peptide methionine sulfoxide reductase EBA04_04490 PF00923 Transaldolase/Fructose-6-phosphate aldolase EBA04_04495 PF01272 Transcription elongation factor, GreA/GreB, C-term EBA04_04495 PF03449 Transcription elongation factor, N-terminal EBA04_04505 PF03466 LysR substrate binding domain EBA04_04505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA04_04510 PF13192 Thioredoxin domain EBA04_04510 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA04_04515 PF10417 C-terminal domain of 1-Cys peroxiredoxin EBA04_04515 PF00578 AhpC/TSA family EBA04_04520 PF05175 Methyltransferase small domain EBA04_04520 PF17827 PrmC N-terminal domain EBA04_04545 PF00561 alpha/beta hydrolase fold EBA04_04555 PF00293 NUDIX domain EBA04_04560 PF01367 5'-3' exonuclease, C-terminal SAM fold EBA04_04560 PF00476 DNA polymerase family A EBA04_04560 PF01612 3'-5' exonuclease EBA04_04560 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EBA04_04575 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EBA04_04575 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch EBA04_04575 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EBA04_04600 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch EBA04_04605 PF02233 NAD(P) transhydrogenase beta subunit EBA04_04630 PF01063 Amino-transferase class IV EBA04_04640 PF04073 Aminoacyl-tRNA editing domain EBA04_04650 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain EBA04_04650 PF17189 Glycosyl hydrolase family 30 beta sandwich domain EBA04_04665 PF03358 NADPH-dependent FMN reductase EBA04_04670 PF03631 Virulence factor BrkB EBA04_04675 PF08534 Redoxin EBA04_04680 PF00708 Acylphosphatase EBA04_04690 PF03976 Polyphosphate kinase 2 (PPK2) EBA04_04695 PF00994 Probable molybdopterin binding domain EBA04_04705 PF03462 PCRF domain EBA04_04705 PF00472 RF-1 domain EBA04_04710 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain EBA04_04710 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain EBA04_04710 PF01488 Shikimate / quinate 5-dehydrogenase EBA04_04720 PF03550 Outer membrane lipoprotein LolB EBA04_04725 PF00288 GHMP kinases N terminal domain EBA04_04725 PF08544 GHMP kinases C terminal EBA04_04735 PF14572 Phosphoribosyl synthetase-associated domain EBA04_04735 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EBA04_04740 PF14693 Ribosomal protein TL5, C-terminal domain EBA04_04740 PF01386 Ribosomal L25p family EBA04_04745 PF01195 Peptidyl-tRNA hydrolase EBA04_04750 PF01926 50S ribosome-binding GTPase EBA04_04750 PF06071 Protein of unknown function (DUF933) EBA04_04770 PF00009 Elongation factor Tu GTP binding domain EBA04_04770 PF03144 Elongation factor Tu domain 2 EBA04_04770 PF03143 Elongation factor Tu C-terminal domain EBA04_04780 PF00584 SecE/Sec61-gamma subunits of protein translocation complex EBA04_04785 PF00467 KOW motif EBA04_04785 PF02357 Transcription termination factor nusG EBA04_04795 PF00298 Ribosomal protein L11, RNA binding domain EBA04_04795 PF03946 Ribosomal protein L11, N-terminal domain EBA04_04800 PF00687 Ribosomal protein L1p/L10e family EBA04_04805 PF00466 Ribosomal protein L10 EBA04_04810 PF16320 Ribosomal protein L7/L12 dimerisation domain EBA04_04810 PF00542 Ribosomal protein L7/L12 C-terminal domain EBA04_04815 PF04565 RNA polymerase Rpb2, domain 3 EBA04_04815 PF00562 RNA polymerase Rpb2, domain 6 EBA04_04815 PF04563 RNA polymerase beta subunit EBA04_04815 PF04561 RNA polymerase Rpb2, domain 2 EBA04_04815 PF04560 RNA polymerase Rpb2, domain 7 EBA04_04815 PF10385 RNA polymerase beta subunit external 1 domain EBA04_04820 PF04998 RNA polymerase Rpb1, domain 5 EBA04_04820 PF05000 RNA polymerase Rpb1, domain 4 EBA04_04820 PF04983 RNA polymerase Rpb1, domain 3 EBA04_04820 PF00623 RNA polymerase Rpb1, domain 2 EBA04_04820 PF04997 RNA polymerase Rpb1, domain 1 EBA04_04825 PF00164 Ribosomal protein S12/S23 EBA04_04830 PF00177 Ribosomal protein S7p/S5e EBA04_04835 PF00679 Elongation factor G C-terminus EBA04_04835 PF14492 Elongation Factor G, domain II EBA04_04835 PF03764 Elongation factor G, domain IV EBA04_04835 PF00009 Elongation factor Tu GTP binding domain EBA04_04835 PF03144 Elongation factor Tu domain 2 EBA04_04840 PF03143 Elongation factor Tu C-terminal domain EBA04_04840 PF00009 Elongation factor Tu GTP binding domain EBA04_04840 PF03144 Elongation factor Tu domain 2 EBA04_04850 PF00338 Ribosomal protein S10p/S20e EBA04_04855 PF00297 Ribosomal protein L3 EBA04_04860 PF00573 Ribosomal protein L4/L1 family EBA04_04865 PF00276 Ribosomal protein L23 EBA04_04870 PF03947 Ribosomal Proteins L2, C-terminal domain EBA04_04870 PF00181 Ribosomal Proteins L2, RNA binding domain EBA04_04875 PF00203 Ribosomal protein S19 EBA04_04880 PF00237 Ribosomal protein L22p/L17e EBA04_04885 PF07650 KH domain EBA04_04885 PF00189 Ribosomal protein S3, C-terminal domain EBA04_04890 PF00252 Ribosomal protein L16p/L10e EBA04_04895 PF00831 Ribosomal L29 protein EBA04_04900 PF00366 Ribosomal protein S17 EBA04_04905 PF00238 Ribosomal protein L14p/L23e EBA04_04910 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EBA04_04910 PF00467 KOW motif EBA04_04915 PF00281 Ribosomal protein L5 EBA04_04915 PF00673 ribosomal L5P family C-terminus EBA04_04920 PF00253 Ribosomal protein S14p/S29e EBA04_04925 PF00410 Ribosomal protein S8 EBA04_04930 PF00347 Ribosomal protein L6 EBA04_04935 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EBA04_04940 PF00333 Ribosomal protein S5, N-terminal domain EBA04_04940 PF03719 Ribosomal protein S5, C-terminal domain EBA04_04945 PF00327 Ribosomal protein L30p/L7e EBA04_04950 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EBA04_04955 PF00344 SecY translocase EBA04_04960 PF00416 Ribosomal protein S13/S18 EBA04_04965 PF00411 Ribosomal protein S11 EBA04_04970 PF00163 Ribosomal protein S4/S9 N-terminal domain EBA04_04970 PF01479 S4 domain EBA04_04975 PF01000 RNA polymerase Rpb3/RpoA insert domain EBA04_04975 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EBA04_04975 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EBA04_04980 PF01196 Ribosomal protein L17 EBA04_04985 PF02600 Disulfide bond formation protein DsbB EBA04_04995 PF01474 Class-II DAHP synthetase family EBA04_05020 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EBA04_05025 PF00056 lactate/malate dehydrogenase, NAD binding domain EBA04_05025 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EBA04_05030 PF02798 Glutathione S-transferase, N-terminal domain EBA04_05030 PF00043 Glutathione S-transferase, C-terminal domain EBA04_05060 PF01609 Transposase DDE domain EBA04_05060 PF05598 Transposase domain (DUF772) EBA04_05080 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA04_05080 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EBA04_05085 PF08240 Alcohol dehydrogenase GroES-like domain EBA04_05085 PF00107 Zinc-binding dehydrogenase EBA04_05095 PF05736 OprF membrane domain EBA04_05095 PF00691 OmpA family EBA04_05105 PF00849 RNA pseudouridylate synthase EBA04_05115 PF00155 Aminotransferase class I and II EBA04_05125 PF00528 Binding-protein-dependent transport system inner membrane component EBA04_05130 PF00528 Binding-protein-dependent transport system inner membrane component EBA04_05135 PF17850 CysA C-terminal regulatory domain EBA04_05135 PF12857 TOBE-like domain EBA04_05135 PF00005 ABC transporter EBA04_05145 PF08240 Alcohol dehydrogenase GroES-like domain EBA04_05145 PF00107 Zinc-binding dehydrogenase EBA04_05165 PF10459 Peptidase S46 EBA04_05170 PF00300 Histidine phosphatase superfamily (branch 1) EBA04_05180 PF08245 Mur ligase middle domain EBA04_05180 PF02875 Mur ligase family, glutamate ligase domain EBA04_05195 PF00156 Phosphoribosyl transferase domain EBA04_05200 PF04305 Protein of unknown function (DUF455) EBA04_05225 PF00149 Calcineurin-like phosphoesterase EBA04_05230 PF01569 PAP2 superfamily EBA04_05235 PF13439 Glycosyltransferase Family 4 EBA04_05235 PF00534 Glycosyl transferases group 1 EBA04_05240 PF02541 Ppx/GppA phosphatase family EBA04_05245 PF13089 Polyphosphate kinase N-terminal domain EBA04_05245 PF17941 Polyphosphate kinase C-terminal domain 1 EBA04_05245 PF02503 Polyphosphate kinase middle domain EBA04_05245 PF13090 Polyphosphate kinase C-terminal domain 2 EBA04_05250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_05250 PF00512 His Kinase A (phospho-acceptor) domain EBA04_05250 PF00989 PAS fold EBA04_05250 PF11808 Phosphate regulon sensor protein PhoR EBA04_05255 PF00486 Transcriptional regulatory protein, C terminal EBA04_05255 PF00072 Response regulator receiver domain EBA04_05260 PF13181 Tetratricopeptide repeat EBA04_05260 PF01435 Peptidase family M48 EBA04_05265 PF00462 Glutaredoxin EBA04_05275 PF00180 Isocitrate/isopropylmalate dehydrogenase EBA04_05275 PF18324 Hypothetical protein TT1725 EBA04_05320 PF05598 Transposase domain (DUF772) EBA04_05320 PF01609 Transposase DDE domain EBA04_05345 PF05698 Bacterial trigger factor protein (TF) C-terminus EBA04_05345 PF05697 Bacterial trigger factor protein (TF) EBA04_05350 PF00574 Clp protease EBA04_05355 PF06689 ClpX C4-type zinc finger EBA04_05355 PF10431 C-terminal, D2-small domain, of ClpB protein EBA04_05355 PF07724 AAA domain (Cdc48 subfamily) EBA04_05360 PF05362 Lon protease (S16) C-terminal proteolytic domain EBA04_05360 PF02190 ATP-dependent protease La (LON) substrate-binding domain EBA04_05360 PF00004 ATPase family associated with various cellular activities (AAA) EBA04_05365 PF00216 Bacterial DNA-binding protein EBA04_05390 PF01476 LysM domain EBA04_05390 PF05257 CHAP domain EBA04_05395 PF00753 Metallo-beta-lactamase superfamily EBA04_05395 PF16123 Hydroxyacylglutathione hydrolase C-terminus EBA04_05405 PF00075 RNase H EBA04_05410 PF00929 Exonuclease EBA04_05420 PF05598 Transposase domain (DUF772) EBA04_05460 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EBA04_05470 PF12706 Beta-lactamase superfamily domain EBA04_05470 PF00753 Metallo-beta-lactamase superfamily EBA04_05475 PF06463 Molybdenum Cofactor Synthesis C EBA04_05475 PF04055 Radical SAM superfamily EBA04_05485 PF01967 MoaC family EBA04_05490 PF02597 ThiS family EBA04_05495 PF02391 MoaE protein EBA04_05525 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding EBA04_05525 PF12169 DNA polymerase III subunits gamma and tau domain III EBA04_05525 PF12170 DNA polymerase III tau subunit V interacting with alpha EBA04_05530 PF02575 YbaB/EbfC DNA-binding family EBA04_05535 PF13662 Toprim domain EBA04_05535 PF02132 RecR protein EBA04_05540 PF01230 HIT domain EBA04_05550 PF11992 Domain of unknown function (DUF3488) EBA04_05550 PF13559 Domain of unknown function (DUF4129) EBA04_05550 PF01841 Transglutaminase-like superfamily EBA04_05560 PF17863 AAA lid domain EBA04_05560 PF07726 ATPase family associated with various cellular activities (AAA) EBA04_05575 PF02545 Maf-like protein EBA04_05580 PF02620 Large ribosomal RNA subunit accumulation protein YceD EBA04_05585 PF01783 Ribosomal L32p protein family EBA04_05590 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EBA04_05590 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EBA04_05600 PF00698 Acyl transferase domain EBA04_05610 PF00550 Phosphopantetheine attachment site EBA04_05615 PF02801 Beta-ketoacyl synthase, C-terminal domain EBA04_05615 PF00109 Beta-ketoacyl synthase, N-terminal domain EBA04_05620 PF04715 Anthranilate synthase component I, N terminal region EBA04_05620 PF00425 chorismate binding enzyme EBA04_05625 PF02618 YceG-like family EBA04_05630 PF09115 DNA polymerase III, delta subunit, C terminal EBA04_05645 PF05598 Transposase domain (DUF772) EBA04_05660 PF00158 Sigma-54 interaction domain EBA04_05660 PF06506 Propionate catabolism activator EBA04_05660 PF02954 Bacterial regulatory protein, Fis family EBA04_05670 PF00285 Citrate synthase, C-terminal domain EBA04_05680 PF00330 Aconitase family (aconitate hydratase) EBA04_05680 PF00694 Aconitase C-terminal domain EBA04_05700 PF05598 Transposase domain (DUF772) EBA04_05700 PF01609 Transposase DDE domain EBA04_05705 PF04303 PrpF protein EBA04_05710 PF07715 TonB-dependent Receptor Plug Domain EBA04_05710 PF00593 TonB dependent receptor EBA04_05760 PF00226 DnaJ domain EBA04_05760 PF01556 DnaJ C terminal domain EBA04_05765 PF00072 Response regulator receiver domain EBA04_05775 PF01145 SPFH domain / Band 7 family EBA04_05775 PF12221 Bacterial membrane protein N terminal EBA04_05780 PF01145 SPFH domain / Band 7 family EBA04_05790 PF00709 Adenylosuccinate synthetase EBA04_05795 PF11838 ERAP1-like C-terminal domain EBA04_05795 PF01433 Peptidase family M1 domain EBA04_05810 PF01420 Type I restriction modification DNA specificity domain EBA04_05815 PF02384 N-6 DNA Methylase EBA04_05825 PF08463 EcoEI R protein C-terminal EBA04_05825 PF04851 Type III restriction enzyme, res subunit EBA04_05825 PF00271 Helicase conserved C-terminal domain EBA04_05825 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EBA04_05865 PF13456 Reverse transcriptase-like EBA04_05865 PF00300 Histidine phosphatase superfamily (branch 1) EBA04_05895 PF00717 Peptidase S24-like EBA04_05895 PF01726 LexA DNA binding domain EBA04_05910 PF02811 PHP domain EBA04_05910 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EBA04_05910 PF07733 Bacterial DNA polymerase III alpha NTPase domain EBA04_05910 PF14579 Helix-hairpin-helix motif EBA04_05930 PF03169 OPT oligopeptide transporter protein EBA04_05945 PF00326 Prolyl oligopeptidase family EBA04_05945 PF07676 WD40-like Beta Propeller Repeat EBA04_05945 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region EBA04_05955 PF12833 Helix-turn-helix domain EBA04_05955 PF02311 AraC-like ligand binding domain EBA04_06000 PF00199 Catalase EBA04_06000 PF18011 C-terminal domain found in long catalases EBA04_06000 PF06628 Catalase-related immune-responsive EBA04_06030 PF02347 Glycine cleavage system P-protein EBA04_06070 PF08019 Phosphoethanolamine transferase EptA/EptB EBA04_06070 PF00884 Sulfatase EBA04_06080 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase EBA04_06085 PF00072 Response regulator receiver domain EBA04_06085 PF00486 Transcriptional regulatory protein, C terminal EBA04_06090 PF00512 His Kinase A (phospho-acceptor) domain EBA04_06090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_06090 PF08521 Two-component sensor kinase N-terminal EBA04_06100 PF03776 Septum formation topological specificity factor MinE EBA04_06105 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EBA04_06110 PF05209 Septum formation inhibitor MinC, N-terminal domain EBA04_06110 PF03775 Septum formation inhibitor MinC, C-terminal domain EBA04_06120 PF07730 Histidine kinase EBA04_06125 PF00072 Response regulator receiver domain EBA04_06125 PF00196 Bacterial regulatory proteins, luxR family EBA04_06140 PF00730 HhH-GPD superfamily base excision DNA repair protein EBA04_06165 PF02222 ATP-grasp domain EBA04_06210 PF04972 BON domain EBA04_06210 PF00691 OmpA family EBA04_06230 PF04717 Type VI secretion system, phage-baseplate injector EBA04_06240 PF00665 Integrase core domain EBA04_06240 PF13936 Helix-turn-helix domain EBA04_06250 PF05598 Transposase domain (DUF772) EBA04_06255 PF05598 Transposase domain (DUF772) EBA04_06265 PF05598 Transposase domain (DUF772) EBA04_06265 PF01609 Transposase DDE domain EBA04_06290 PF05598 Transposase domain (DUF772) EBA04_06370 PF00004 ATPase family associated with various cellular activities (AAA) EBA04_06370 PF17871 AAA lid domain EBA04_06370 PF07724 AAA domain (Cdc48 subfamily) EBA04_06370 PF10431 C-terminal, D2-small domain, of ClpB protein EBA04_06380 PF04717 Type VI secretion system, phage-baseplate injector EBA04_06380 PF16671 Actin cross-linking domain EBA04_06415 PF01208 Uroporphyrinogen decarboxylase (URO-D) EBA04_06425 PF01761 3-dehydroquinate synthase EBA04_06430 PF01202 Shikimate kinase EBA04_06435 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region EBA04_06435 PF01243 Pyridoxamine 5'-phosphate oxidase EBA04_06445 PF04012 PspA/IM30 family EBA04_06470 PF03738 Glutathionylspermidine synthase preATP-grasp EBA04_06525 PF12706 Beta-lactamase superfamily domain EBA04_06535 PF05598 Transposase domain (DUF772) EBA04_06550 PF00324 Amino acid permease EBA04_06555 PF00196 Bacterial regulatory proteins, luxR family EBA04_06560 PF00561 alpha/beta hydrolase fold EBA04_06570 PF00324 Amino acid permease EBA04_06595 PF00145 C-5 cytosine-specific DNA methylase EBA04_06600 PF05598 Transposase domain (DUF772) EBA04_06600 PF01609 Transposase DDE domain EBA04_06610 PF02322 Cytochrome bd terminal oxidase subunit II EBA04_06615 PF00756 Putative esterase EBA04_06620 PF00571 CBS domain EBA04_06620 PF01769 Divalent cation transporter EBA04_06620 PF03448 MgtE intracellular N domain EBA04_06630 PF05524 PEP-utilising enzyme, N-terminal EBA04_06630 PF02896 PEP-utilising enzyme, TIM barrel domain EBA04_06630 PF00391 PEP-utilising enzyme, mobile domain EBA04_06635 PF00381 PTS HPr component phosphorylation site EBA04_06650 PF05598 Transposase domain (DUF772) EBA04_06650 PF01609 Transposase DDE domain EBA04_06665 PF03668 P-loop ATPase protein family EBA04_06670 PF07475 HPr Serine kinase C-terminal domain EBA04_06670 PF02603 HPr Serine kinase N terminus EBA04_06675 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EBA04_06680 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EBA04_06685 PF04552 Sigma-54, DNA binding domain EBA04_06685 PF00309 Sigma-54 factor, Activator interacting domain (AID) EBA04_06685 PF04963 Sigma-54 factor, core binding domain EBA04_06690 PF00005 ABC transporter EBA04_06695 PF03968 OstA-like protein EBA04_06710 PF01380 SIS domain EBA04_06710 PF00571 CBS domain EBA04_06715 PF01722 BolA-like protein EBA04_06720 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EBA04_06745 PF00551 Formyl transferase EBA04_06760 PF02769 AIR synthase related protein, C-terminal domain EBA04_06760 PF00586 AIR synthase related protein, N-terminal domain EBA04_06770 PF01594 AI-2E family transporter EBA04_06775 PF00308 Bacterial dnaA protein EBA04_06780 PF00483 Nucleotidyl transferase EBA04_06785 PF01636 Phosphotransferase enzyme family EBA04_06795 PF01546 Peptidase family M20/M25/M40 EBA04_06795 PF07687 Peptidase dimerisation domain EBA04_06820 PF05598 Transposase domain (DUF772) EBA04_06820 PF01609 Transposase DDE domain EBA04_06830 PF00355 Rieske [2Fe-2S] domain EBA04_06840 PF00266 Aminotransferase class-V EBA04_06845 PF01458 Uncharacterized protein family (UPF0051) EBA04_06850 PF00005 ABC transporter EBA04_06855 PF01458 Uncharacterized protein family (UPF0051) EBA04_06860 PF02082 Transcriptional regulator EBA04_06910 PF03807 NADP oxidoreductase coenzyme F420-dependent EBA04_06910 PF14748 Pyrroline-5-carboxylate reductase dimerisation EBA04_06915 PF01168 Alanine racemase, N-terminal domain EBA04_06925 PF00437 Type II/IV secretion system protein EBA04_06930 PF00437 Type II/IV secretion system protein EBA04_06950 PF00117 Glutamine amidotransferase class-I EBA04_06950 PF13673 Acetyltransferase (GNAT) domain EBA04_06950 PF13302 Acetyltransferase (GNAT) domain EBA04_06950 PF00958 GMP synthase C terminal domain EBA04_06950 PF03352 Methyladenine glycosylase EBA04_06965 PF02622 Uncharacterized ACR, COG1678 EBA04_06970 PF03652 Holliday junction resolvase EBA04_06975 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EBA04_06975 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EBA04_06985 PF02566 OsmC-like protein EBA04_06995 PF02567 Phenazine biosynthesis-like protein EBA04_07005 PF00696 Amino acid kinase family EBA04_07005 PF01842 ACT domain EBA04_07020 PF08245 Mur ligase middle domain EBA04_07035 PF05598 Transposase domain (DUF772) EBA04_07035 PF01609 Transposase DDE domain EBA04_07045 PF00348 Polyprenyl synthetase EBA04_07050 PF00436 Single-strand binding protein family EBA04_07060 PF01590 GAF domain EBA04_07060 PF00360 Phytochrome region EBA04_07060 PF00990 Diguanylate cyclase, GGDEF domain EBA04_07060 PF00563 EAL domain EBA04_07065 PF09277 Erythronolide synthase, docking EBA04_07065 PF08990 Erythronolide synthase docking EBA04_07065 PF16197 Ketoacyl-synthetase C-terminal extension EBA04_07065 PF08240 Alcohol dehydrogenase GroES-like domain EBA04_07065 PF00109 Beta-ketoacyl synthase, N-terminal domain EBA04_07065 PF00550 Phosphopantetheine attachment site EBA04_07065 PF02801 Beta-ketoacyl synthase, C-terminal domain EBA04_07065 PF00698 Acyl transferase domain EBA04_07065 PF08659 KR domain EBA04_07065 PF14765 Polyketide synthase dehydratase EBA04_07105 PF04328 Selenoprotein, putative EBA04_07110 PF13722 5TM C-terminal transporter carbon starvation CstA EBA04_07110 PF02554 Carbon starvation protein CstA EBA04_07115 PF02678 Pirin EBA04_07115 PF05726 Pirin C-terminal cupin domain EBA04_07125 PF04717 Type VI secretion system, phage-baseplate injector EBA04_07165 PF05598 Transposase domain (DUF772) EBA04_07210 PF04493 Endonuclease V EBA04_07215 PF00300 Histidine phosphatase superfamily (branch 1) EBA04_07225 PF01339 CheB methylesterase EBA04_07225 PF00072 Response regulator receiver domain EBA04_07230 PF03705 CheR methyltransferase, all-alpha domain EBA04_07230 PF01739 CheR methyltransferase, SAM binding domain EBA04_07235 PF13426 PAS domain EBA04_07235 PF00563 EAL domain EBA04_07235 PF00990 Diguanylate cyclase, GGDEF domain EBA04_07240 PF01584 CheW-like domain EBA04_07245 PF02203 Tar ligand binding domain homologue EBA04_07245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA04_07245 PF00672 HAMP domain EBA04_07255 PF02895 Signal transducing histidine kinase, homodimeric domain EBA04_07255 PF01627 Hpt domain EBA04_07255 PF01584 CheW-like domain EBA04_07255 PF09078 CheY binding EBA04_07255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_07265 PF17757 UvrB interaction domain EBA04_07265 PF03461 TRCF domain EBA04_07265 PF00271 Helicase conserved C-terminal domain EBA04_07265 PF00270 DEAD/DEAH box helicase EBA04_07265 PF02559 CarD-like/TRCF domain EBA04_07275 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ EBA04_07300 PF00795 Carbon-nitrogen hydrolase EBA04_07310 PF00749 tRNA synthetases class I (E and Q), catalytic domain EBA04_07315 PF01475 Ferric uptake regulator family EBA04_07345 PF13936 Helix-turn-helix domain EBA04_07345 PF00665 Integrase core domain EBA04_07350 PF05598 Transposase domain (DUF772) EBA04_07420 PF00107 Zinc-binding dehydrogenase EBA04_07420 PF08240 Alcohol dehydrogenase GroES-like domain EBA04_07425 PF00654 Voltage gated chloride channel EBA04_07435 PF01609 Transposase DDE domain EBA04_07435 PF05598 Transposase domain (DUF772) EBA04_07440 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EBA04_07440 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EBA04_07490 PF04539 Sigma-70 region 3 EBA04_07490 PF04542 Sigma-70 region 2 EBA04_07490 PF04545 Sigma-70, region 4 EBA04_07495 PF00271 Helicase conserved C-terminal domain EBA04_07495 PF03880 DbpA RNA binding domain EBA04_07495 PF00270 DEAD/DEAH box helicase EBA04_07500 PF00990 Diguanylate cyclase, GGDEF domain EBA04_07500 PF08448 PAS fold EBA04_07500 PF00563 EAL domain EBA04_07505 PF01479 S4 domain EBA04_07505 PF00849 RNA pseudouridylate synthase EBA04_07525 PF03737 Aldolase/RraA EBA04_07530 PF00144 Beta-lactamase EBA04_07535 PF00999 Sodium/hydrogen exchanger family EBA04_07540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_07540 PF00512 His Kinase A (phospho-acceptor) domain EBA04_07540 PF00672 HAMP domain EBA04_07545 PF00486 Transcriptional regulatory protein, C terminal EBA04_07545 PF00072 Response regulator receiver domain EBA04_07550 PF02321 Outer membrane efflux protein EBA04_07565 PF00873 AcrB/AcrD/AcrF family EBA04_07575 PF00005 ABC transporter EBA04_07575 PF00664 ABC transporter transmembrane region EBA04_07600 PF05598 Transposase domain (DUF772) EBA04_07600 PF01609 Transposase DDE domain EBA04_07645 PF00085 Thioredoxin EBA04_07655 PF08264 Anticodon-binding domain of tRNA EBA04_07655 PF13603 Leucyl-tRNA synthetase, Domain 2 EBA04_07655 PF00133 tRNA synthetases class I (I, L, M and V) EBA04_07675 PF01467 Cytidylyltransferase-like EBA04_07695 PF02590 Predicted SPOUT methyltransferase EBA04_07705 PF03544 Gram-negative bacterial TonB protein C-terminal EBA04_07720 PF04402 Protein of unknown function (DUF541) EBA04_07725 PF02545 Maf-like protein EBA04_07730 PF10150 Ribonuclease E/G family EBA04_07730 PF00575 S1 RNA binding domain EBA04_07735 PF13116 Protein of unknown function EBA04_07735 PF13502 AsmA-like C-terminal region EBA04_07745 PF01523 Putative modulator of DNA gyrase EBA04_07750 PF04751 Protein of unknown function (DUF615) EBA04_07755 PF01523 Putative modulator of DNA gyrase EBA04_07770 PF14521 Lysine-specific metallo-endopeptidase EBA04_07780 PF00348 Polyprenyl synthetase EBA04_07785 PF02609 Exonuclease VII small subunit EBA04_07790 PF01171 PP-loop family EBA04_07790 PF11734 TilS substrate C-terminal domain EBA04_07790 PF09179 TilS substrate binding domain EBA04_07795 PF00245 Alkaline phosphatase EBA04_07800 PF00375 Sodium:dicarboxylate symporter family EBA04_07815 PF00877 NlpC/P60 family EBA04_07820 PF00877 NlpC/P60 family EBA04_07825 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EBA04_07830 PF04235 Protein of unknown function (DUF418) EBA04_07835 PF01266 FAD dependent oxidoreductase EBA04_07840 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA04_07840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EBA04_07865 PF01609 Transposase DDE domain EBA04_07865 PF05598 Transposase domain (DUF772) EBA04_07875 PF00665 Integrase core domain EBA04_07875 PF13936 Helix-turn-helix domain EBA04_07905 PF00665 Integrase core domain EBA04_07905 PF13936 Helix-turn-helix domain EBA04_07910 PF01609 Transposase DDE domain EBA04_07910 PF05598 Transposase domain (DUF772) EBA04_07925 PF10609 NUBPL iron-transfer P-loop NTPase EBA04_07935 PF00692 dUTPase EBA04_07950 PF05598 Transposase domain (DUF772) EBA04_07950 PF01609 Transposase DDE domain EBA04_07965 PF01738 Dienelactone hydrolase family EBA04_07970 PF00919 Uncharacterized protein family UPF0004 EBA04_07970 PF04055 Radical SAM superfamily EBA04_07970 PF18693 TRAM domain EBA04_07980 PF01609 Transposase DDE domain EBA04_07980 PF05598 Transposase domain (DUF772) EBA04_07990 PF03449 Transcription elongation factor, N-terminal EBA04_07990 PF01272 Transcription elongation factor, GreA/GreB, C-term EBA04_08005 PF13936 Helix-turn-helix domain EBA04_08005 PF00665 Integrase core domain EBA04_08015 PF05872 Bacterial protein of unknown function (DUF853) EBA04_08035 PF02666 Phosphatidylserine decarboxylase EBA04_08040 PF02630 SCO1/SenC EBA04_08045 PF05175 Methyltransferase small domain EBA04_08050 PF01264 Chorismate synthase EBA04_08055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EBA04_08055 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EBA04_08060 PF02774 Semialdehyde dehydrogenase, dimerisation domain EBA04_08060 PF01118 Semialdehyde dehydrogenase, NAD binding domain EBA04_08080 PF01416 tRNA pseudouridine synthase EBA04_08085 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase EBA04_08090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA04_08090 PF03466 LysR substrate binding domain EBA04_08095 PF00291 Pyridoxal-phosphate dependent enzyme EBA04_08105 PF00290 Tryptophan synthase alpha chain EBA04_08115 PF01039 Carboxyl transferase domain EBA04_08115 PF17848 Acetyl-coA carboxylase zinc finger domain EBA04_08120 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EBA04_08120 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EBA04_08120 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EBA04_08120 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EBA04_08135 PF00990 Diguanylate cyclase, GGDEF domain EBA04_08135 PF03707 Bacterial signalling protein N terminal repeat EBA04_08135 PF00563 EAL domain EBA04_08175 PF00121 Triosephosphate isomerase EBA04_08190 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 EBA04_08195 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EBA04_08200 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit EBA04_08205 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit EBA04_08215 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region EBA04_08215 PF10531 SLBB domain EBA04_08215 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EBA04_08220 PF00384 Molybdopterin oxidoreductase EBA04_08220 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal EBA04_08220 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region EBA04_08225 PF00146 NADH dehydrogenase EBA04_08230 PF12838 4Fe-4S dicluster domain EBA04_08235 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 EBA04_08240 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EBA04_08245 PF00361 Proton-conducting membrane transporter EBA04_08245 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EBA04_08250 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus EBA04_08250 PF00361 Proton-conducting membrane transporter EBA04_08255 PF00361 Proton-conducting membrane transporter EBA04_08265 PF17384 RimP C-terminal SH3 domain EBA04_08265 PF02576 RimP N-terminal domain EBA04_08270 PF13184 NusA-like KH domain EBA04_08270 PF08529 NusA N-terminal domain EBA04_08270 PF00575 S1 RNA binding domain EBA04_08275 PF04760 Translation initiation factor IF-2, N-terminal region EBA04_08275 PF08364 Bacterial translation initiation factor IF-2 associated region EBA04_08275 PF11987 Translation-initiation factor 2 EBA04_08275 PF00009 Elongation factor Tu GTP binding domain EBA04_08280 PF02033 Ribosome-binding factor A EBA04_08285 PF09157 Pseudouridine synthase II TruB, C-terminal EBA04_08285 PF16198 tRNA pseudouridylate synthase B C-terminal domain EBA04_08285 PF01509 TruB family pseudouridylate synthase (N terminal domain) EBA04_08290 PF00312 Ribosomal protein S15 EBA04_08295 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain EBA04_08295 PF00575 S1 RNA binding domain EBA04_08295 PF03725 3' exoribonuclease family, domain 2 EBA04_08295 PF01138 3' exoribonuclease family, domain 1 EBA04_08295 PF00013 KH domain EBA04_08305 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain EBA04_08305 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain EBA04_08315 PF00731 AIR carboxylase EBA04_08320 PF02222 ATP-grasp domain EBA04_08320 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain EBA04_08325 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EBA04_08325 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EBA04_08330 PF00462 Glutaredoxin EBA04_08340 PF01914 MarC family integral membrane protein EBA04_08350 PF00593 TonB dependent receptor EBA04_08355 PF01609 Transposase DDE domain EBA04_08355 PF05598 Transposase domain (DUF772) EBA04_08360 PF03641 Possible lysine decarboxylase EBA04_08360 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases EBA04_08360 PF11892 Domain of unknown function (DUF3412) EBA04_08390 PF05567 Neisseria PilC beta-propeller domain EBA04_08405 PF00114 Pilin (bacterial filament) EBA04_08405 PF07963 Prokaryotic N-terminal methylation motif EBA04_08410 PF02151 UvrB/uvrC motif EBA04_08410 PF17757 UvrB interaction domain EBA04_08410 PF12344 Ultra-violet resistance protein B EBA04_08410 PF04851 Type III restriction enzyme, res subunit EBA04_08410 PF00271 Helicase conserved C-terminal domain EBA04_08440 PF03837 RecT family EBA04_08530 PF00145 C-5 cytosine-specific DNA methylase EBA04_08545 PF01555 DNA methylase EBA04_08560 PF07102 Protein of unknown function (DUF1364) EBA04_08740 PF03837 RecT family EBA04_08905 PF17391 Urocanase N-terminal domain EBA04_08905 PF01175 Urocanase Rossmann-like domain EBA04_08905 PF17392 Urocanase C-terminal domain EBA04_08915 PF00221 Aromatic amino acid lyase EBA04_08920 PF07969 Amidohydrolase family EBA04_08930 PF00392 Bacterial regulatory proteins, gntR family EBA04_08930 PF07702 UTRA domain EBA04_08955 PF01794 Ferric reductase like transmembrane component EBA04_08965 PF00174 Oxidoreductase molybdopterin binding domain EBA04_08970 PF00266 Aminotransferase class-V EBA04_08975 PF01842 ACT domain EBA04_08975 PF00800 Prephenate dehydratase EBA04_08975 PF01817 Chorismate mutase type II EBA04_08980 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EBA04_09005 PF05598 Transposase domain (DUF772) EBA04_09005 PF01609 Transposase DDE domain EBA04_09010 PF03544 Gram-negative bacterial TonB protein C-terminal EBA04_09015 PF02403 Seryl-tRNA synthetase N-terminal domain EBA04_09015 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EBA04_09025 PF02525 Flavodoxin-like fold EBA04_09030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA04_09030 PF03466 LysR substrate binding domain EBA04_09045 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin EBA04_09065 PF03377 TAL effector repeat EBA04_09085 PF02203 Tar ligand binding domain homologue EBA04_09085 PF00672 HAMP domain EBA04_09085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA04_09105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_09105 PF00072 Response regulator receiver domain EBA04_09105 PF00672 HAMP domain EBA04_09105 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EBA04_09105 PF00512 His Kinase A (phospho-acceptor) domain EBA04_09105 PF01627 Hpt domain EBA04_09110 PF06745 KaiC EBA04_09115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_09115 PF00072 Response regulator receiver domain EBA04_09115 PF13426 PAS domain EBA04_09125 PF03918 Cytochrome C biogenesis protein EBA04_09130 PF08534 Redoxin EBA04_09135 PF01578 Cytochrome C assembly protein EBA04_09135 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal EBA04_09140 PF03100 CcmE EBA04_09145 PF04995 Heme exporter protein D (CcmD) EBA04_09150 PF01578 Cytochrome C assembly protein EBA04_09155 PF00082 Subtilase family EBA04_09165 PF04542 Sigma-70 region 2 EBA04_09165 PF08281 Sigma-70, region 4 EBA04_09175 PF00034 Cytochrome c EBA04_09190 PF05523 WxcM-like, C-terminal EBA04_09210 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EBA04_09215 PF01943 Polysaccharide biosynthesis protein EBA04_09220 PF00535 Glycosyl transferase family 2 EBA04_09255 PF00534 Glycosyl transferases group 1 EBA04_09255 PF13579 Glycosyl transferase 4-like domain EBA04_09270 PF06745 KaiC EBA04_09275 PF00664 ABC transporter transmembrane region EBA04_09275 PF00005 ABC transporter EBA04_09285 PF07690 Major Facilitator Superfamily EBA04_09305 PF00296 Luciferase-like monooxygenase EBA04_09320 PF01595 Cyclin M transmembrane N-terminal domain EBA04_09320 PF03471 Transporter associated domain EBA04_09320 PF00571 CBS domain EBA04_09335 PF01384 Phosphate transporter family EBA04_09355 PF01751 Toprim domain EBA04_09355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_09355 PF00986 DNA gyrase B subunit, carboxyl terminus EBA04_09355 PF00204 DNA gyrase B EBA04_09365 PF00117 Glutamine amidotransferase class-I EBA04_09365 PF06418 CTP synthase N-terminus EBA04_09370 PF00793 DAHP synthetase I family EBA04_09375 PF03952 Enolase, N-terminal domain EBA04_09375 PF00113 Enolase, C-terminal TIM barrel domain EBA04_09380 PF04977 Septum formation initiator EBA04_09385 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EBA04_09395 PF02542 YgbB family EBA04_09400 PF01142 tRNA pseudouridine synthase D (TruD) EBA04_09405 PF01713 Smr domain EBA04_09410 PF01975 Survival protein SurE EBA04_09420 PF09335 SNARE associated Golgi protein EBA04_09425 PF01551 Peptidase family M23 EBA04_09425 PF01476 LysM domain EBA04_09435 PF01985 CRS1 / YhbY (CRM) domain EBA04_09440 PF01728 FtsJ-like methyltransferase EBA04_09445 PF06480 FtsH Extracellular EBA04_09445 PF00004 ATPase family associated with various cellular activities (AAA) EBA04_09445 PF17862 AAA+ lid domain EBA04_09445 PF01434 Peptidase family M41 EBA04_09450 PF00809 Pterin binding enzyme EBA04_09460 PF17209 Hfq protein EBA04_09465 PF16360 GTP-binding GTPase Middle Region EBA04_09465 PF01926 50S ribosome-binding GTPase EBA04_09465 PF13167 GTP-binding GTPase N-terminal EBA04_09470 PF02464 Competence-damaged protein EBA04_09475 PF03109 ABC1 family EBA04_09480 PF00717 Peptidase S24-like EBA04_09480 PF01726 LexA DNA binding domain EBA04_09485 PF00154 recA bacterial DNA recombination protein EBA04_09495 PF02631 RecX family EBA04_09500 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EBA04_09500 PF01411 tRNA synthetases class II (A) EBA04_09500 PF02272 DHHA1 domain EBA04_09505 PF02599 Global regulator protein family EBA04_09560 PF02678 Pirin EBA04_09560 PF17954 Quercetinase C-terminal cupin domain EBA04_09565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA04_09565 PF03466 LysR substrate binding domain EBA04_09590 PF08543 Phosphomethylpyrimidine kinase EBA04_09590 PF02581 Thiamine monophosphate synthase EBA04_09600 PF13638 PIN domain EBA04_09600 PF02562 PhoH-like protein EBA04_09605 PF00578 AhpC/TSA family EBA04_09620 PF00701 Dihydrodipicolinate synthetase family EBA04_09630 PF11953 Domain of unknown function (DUF3470) EBA04_09630 PF00037 4Fe-4S binding domain EBA04_09635 PF05035 2-keto-3-deoxy-galactonokinase EBA04_09640 PF08450 SMP-30/Gluconolactonase/LRE-like region EBA04_09645 PF13378 Enolase C-terminal domain-like EBA04_09645 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EBA04_09650 PF01081 KDPG and KHG aldolase EBA04_09655 PF03466 LysR substrate binding domain EBA04_09655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA04_09675 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EBA04_09675 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EBA04_09685 PF00083 Sugar (and other) transporter EBA04_09705 PF01520 N-acetylmuramoyl-L-alanine amidase EBA04_09710 PF02649 Type I GTP cyclohydrolase folE2 EBA04_09720 PF12627 Probable RNA and SrmB- binding site of polymerase A EBA04_09720 PF12626 Polymerase A arginine-rich C-terminus EBA04_09720 PF01743 Poly A polymerase head domain EBA04_09725 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EBA04_09730 PF02548 Ketopantoate hydroxymethyltransferase EBA04_09735 PF02569 Pantoate-beta-alanine ligase EBA04_09740 PF02261 Aspartate decarboxylase EBA04_09745 PF00342 Phosphoglucose isomerase EBA04_09770 PF14310 Fibronectin type III-like domain EBA04_09770 PF01915 Glycosyl hydrolase family 3 C-terminal domain EBA04_09770 PF00933 Glycosyl hydrolase family 3 N terminal domain EBA04_09780 PF00474 Sodium:solute symporter family EBA04_09790 PF01590 GAF domain EBA04_09790 PF00360 Phytochrome region EBA04_09790 PF00563 EAL domain EBA04_09790 PF00990 Diguanylate cyclase, GGDEF domain EBA04_09800 PF00150 Cellulase (glycosyl hydrolase family 5) EBA04_09800 PF02013 Cellulose or protein binding domain EBA04_09810 PF00072 Response regulator receiver domain EBA04_09820 PF04551 GcpE protein EBA04_09825 PF01569 PAP2 superfamily EBA04_09835 PF07690 Major Facilitator Superfamily EBA04_09845 PF01177 Asp/Glu/Hydantoin racemase EBA04_09855 PF00892 EamA-like transporter family EBA04_09860 PF01565 FAD binding domain EBA04_09860 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EBA04_09865 PF01180 Dihydroorotate dehydrogenase EBA04_09885 PF00171 Aldehyde dehydrogenase family EBA04_09920 PF00742 Homoserine dehydrogenase EBA04_09920 PF01842 ACT domain EBA04_09920 PF13840 ACT domain EBA04_09920 PF00696 Amino acid kinase family EBA04_09920 PF03447 Homoserine dehydrogenase, NAD binding domain EBA04_09925 PF00288 GHMP kinases N terminal domain EBA04_09925 PF08544 GHMP kinases C terminal EBA04_09930 PF07519 Tannase and feruloyl esterase EBA04_09945 PF14821 Threonine synthase N terminus EBA04_09945 PF00291 Pyridoxal-phosphate dependent enzyme EBA04_09960 PF03129 Anticodon binding domain EBA04_09960 PF13393 Histidyl-tRNA synthetase EBA04_09980 PF01634 ATP phosphoribosyltransferase EBA04_09980 PF08029 HisG, C-terminal domain EBA04_09985 PF00815 Histidinol dehydrogenase EBA04_09990 PF00155 Aminotransferase class I and II EBA04_09995 PF00475 Imidazoleglycerol-phosphate dehydratase EBA04_10000 PF00117 Glutamine amidotransferase class-I EBA04_10005 PF00977 Histidine biosynthesis protein EBA04_10010 PF00977 Histidine biosynthesis protein EBA04_10015 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase EBA04_10015 PF01502 Phosphoribosyl-AMP cyclohydrolase EBA04_10040 PF03079 ARD/ARD' family EBA04_10045 PF00596 Class II Aldolase and Adducin N-terminal domain EBA04_10050 PF13520 Amino acid permease EBA04_10055 PF13520 Amino acid permease EBA04_10065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EBA04_10065 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EBA04_10070 PF01565 FAD binding domain EBA04_10070 PF02913 FAD linked oxidases, C-terminal domain EBA04_10095 PF08207 Elongation factor P (EF-P) KOW-like domain EBA04_10095 PF01132 Elongation factor P (EF-P) OB domain EBA04_10095 PF09285 Elongation factor P, C-terminal EBA04_10100 PF00106 short chain dehydrogenase EBA04_10105 PF00682 HMGL-like EBA04_10115 PF00378 Enoyl-CoA hydratase/isomerase EBA04_10125 PF07670 Nucleoside recognition EBA04_10125 PF07664 Ferrous iron transport protein B C terminus EBA04_10125 PF02421 Ferrous iron transport protein B EBA04_10150 PF00155 Aminotransferase class I and II EBA04_10155 PF03473 MOSC domain EBA04_10155 PF03475 3-alpha domain EBA04_10160 PF01113 Dihydrodipicolinate reductase, N-terminus EBA04_10160 PF05173 Dihydrodipicolinate reductase, C-terminus EBA04_10165 PF00117 Glutamine amidotransferase class-I EBA04_10165 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EBA04_10175 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EBA04_10175 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EBA04_10175 PF02142 MGS-like domain EBA04_10180 PF01272 Transcription elongation factor, GreA/GreB, C-term EBA04_10180 PF03449 Transcription elongation factor, N-terminal EBA04_10190 PF02272 DHHA1 domain EBA04_10190 PF01368 DHH family EBA04_10190 PF17768 RecJ OB domain EBA04_10205 PF00072 Response regulator receiver domain EBA04_10205 PF04397 LytTr DNA-binding domain EBA04_10215 PF01336 OB-fold nucleic acid binding domain EBA04_10215 PF00152 tRNA synthetases class II (D, K and N) EBA04_10220 PF00072 Response regulator receiver domain EBA04_10230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_10230 PF01627 Hpt domain EBA04_10230 PF00072 Response regulator receiver domain EBA04_10230 PF00512 His Kinase A (phospho-acceptor) domain EBA04_10235 PF00378 Enoyl-CoA hydratase/isomerase EBA04_10240 PF13193 AMP-binding enzyme C-terminal domain EBA04_10240 PF00501 AMP-binding enzyme EBA04_10250 PF00330 Aconitase family (aconitate hydratase) EBA04_10250 PF00694 Aconitase C-terminal domain EBA04_10265 PF11791 Aconitate B N-terminal domain EBA04_10265 PF06434 Aconitate hydratase 2 N-terminus EBA04_10265 PF00330 Aconitase family (aconitate hydratase) EBA04_10270 PF00561 alpha/beta hydrolase fold EBA04_10280 PF03707 Bacterial signalling protein N terminal repeat EBA04_10280 PF00990 Diguanylate cyclase, GGDEF domain EBA04_10280 PF00563 EAL domain EBA04_10285 PF00072 Response regulator receiver domain EBA04_10285 PF01339 CheB methylesterase EBA04_10290 PF03975 CheD chemotactic sensory transduction EBA04_10295 PF03705 CheR methyltransferase, all-alpha domain EBA04_10295 PF01739 CheR methyltransferase, SAM binding domain EBA04_10300 PF00672 HAMP domain EBA04_10300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA04_10300 PF02203 Tar ligand binding domain homologue EBA04_10310 PF01584 CheW-like domain EBA04_10315 PF07317 Flagellar regulator YcgR EBA04_10315 PF07238 PilZ domain EBA04_10325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA04_10325 PF00672 HAMP domain EBA04_10325 PF02203 Tar ligand binding domain homologue EBA04_10330 PF00672 HAMP domain EBA04_10330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA04_10330 PF02203 Tar ligand binding domain homologue EBA04_10335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA04_10335 PF00672 HAMP domain EBA04_10335 PF02203 Tar ligand binding domain homologue EBA04_10350 PF02203 Tar ligand binding domain homologue EBA04_10350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA04_10350 PF00672 HAMP domain EBA04_10355 PF05598 Transposase domain (DUF772) EBA04_10360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA04_10360 PF00672 HAMP domain EBA04_10360 PF02203 Tar ligand binding domain homologue EBA04_10365 PF02203 Tar ligand binding domain homologue EBA04_10365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA04_10365 PF00672 HAMP domain EBA04_10395 PF00672 HAMP domain EBA04_10395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA04_10395 PF02203 Tar ligand binding domain homologue EBA04_10400 PF13936 Helix-turn-helix domain EBA04_10400 PF00665 Integrase core domain EBA04_10415 PF01627 Hpt domain EBA04_10415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_10415 PF02895 Signal transducing histidine kinase, homodimeric domain EBA04_10415 PF09078 CheY binding EBA04_10415 PF01584 CheW-like domain EBA04_10420 PF00072 Response regulator receiver domain EBA04_10430 PF01584 CheW-like domain EBA04_10435 PF13614 AAA domain EBA04_10440 PF13677 Membrane MotB of proton-channel complex MotA/MotB EBA04_10440 PF00691 OmpA family EBA04_10445 PF01618 MotA/TolQ/ExbB proton channel family EBA04_10465 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EBA04_10465 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EBA04_10480 PF00593 TonB dependent receptor EBA04_10480 PF07715 TonB-dependent Receptor Plug Domain EBA04_10500 PF17728 BsuBI/PstI restriction endonuclease HTH domain EBA04_10500 PF06616 BsuBI/PstI restriction endonuclease domain EBA04_10505 PF01609 Transposase DDE domain EBA04_10505 PF05598 Transposase domain (DUF772) EBA04_10550 PF05598 Transposase domain (DUF772) EBA04_10560 PF05598 Transposase domain (DUF772) EBA04_10570 PF07194 P2 response regulator binding domain EBA04_10570 PF01627 Hpt domain EBA04_10570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_10570 PF01584 CheW-like domain EBA04_10570 PF02895 Signal transducing histidine kinase, homodimeric domain EBA04_10575 PF04344 Chemotaxis phosphatase, CheZ EBA04_10580 PF00072 Response regulator receiver domain EBA04_10585 PF04542 Sigma-70 region 2 EBA04_10585 PF04539 Sigma-70 region 3 EBA04_10585 PF04545 Sigma-70, region 4 EBA04_10590 PF10609 NUBPL iron-transfer P-loop NTPase EBA04_10595 PF00448 SRP54-type protein, GTPase domain EBA04_10600 PF00771 FHIPEP family EBA04_10605 PF01312 FlhB HrpN YscU SpaS Family EBA04_10610 PF00563 EAL domain EBA04_10610 PF00990 Diguanylate cyclase, GGDEF domain EBA04_10610 PF03707 Bacterial signalling protein N terminal repeat EBA04_10615 PF03707 Bacterial signalling protein N terminal repeat EBA04_10615 PF13188 PAS domain EBA04_10615 PF00990 Diguanylate cyclase, GGDEF domain EBA04_10615 PF00563 EAL domain EBA04_10620 PF00563 EAL domain EBA04_10620 PF00990 Diguanylate cyclase, GGDEF domain EBA04_10620 PF03707 Bacterial signalling protein N terminal repeat EBA04_10620 PF13188 PAS domain EBA04_10625 PF01311 Bacterial export proteins, family 1 EBA04_10630 PF01313 Bacterial export proteins, family 3 EBA04_10635 PF00813 FliP family EBA04_10640 PF04347 Flagellar biosynthesis protein, FliO EBA04_10645 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EBA04_10650 PF02154 Flagellar motor switch protein FliM EBA04_10650 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EBA04_10670 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EBA04_10670 PF18269 T3SS EscN ATPase C-terminal domain EBA04_10680 PF01706 FliG C-terminal domain EBA04_10680 PF14841 FliG middle domain EBA04_10680 PF14842 FliG N-terminal domain EBA04_10685 PF01514 Secretory protein of YscJ/FliF family EBA04_10685 PF08345 Flagellar M-ring protein C-terminal EBA04_10690 PF02049 Flagellar hook-basal body complex protein FliE EBA04_10700 PF00535 Glycosyl transferase family 2 EBA04_10700 PF00534 Glycosyl transferases group 1 EBA04_10735 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EBA04_10735 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EBA04_10745 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EBA04_10750 PF00072 Response regulator receiver domain EBA04_10750 PF00158 Sigma-54 interaction domain EBA04_10750 PF02954 Bacterial regulatory protein, Fis family EBA04_10755 PF01339 CheB methylesterase EBA04_10755 PF00072 Response regulator receiver domain EBA04_10760 PF04963 Sigma-54 factor, core binding domain EBA04_10760 PF00309 Sigma-54 factor, Activator interacting domain (AID) EBA04_10760 PF04552 Sigma-54, DNA binding domain EBA04_10765 PF00196 Bacterial regulatory proteins, luxR family EBA04_10765 PF00072 Response regulator receiver domain EBA04_10780 PF02561 Flagellar protein FliS EBA04_10785 PF07195 Flagellar hook-associated protein 2 C-terminus EBA04_10785 PF02465 Flagellar hook-associated protein 2 N-terminus EBA04_10785 PF07196 Flagellin hook IN motif EBA04_10790 PF00700 Bacterial flagellin C-terminal helical region EBA04_10790 PF00669 Bacterial flagellin N-terminal helical region EBA04_10800 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EBA04_10800 PF07196 Flagellin hook IN motif EBA04_10805 PF10135 Rod binding protein EBA04_10805 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EBA04_10810 PF02119 Flagellar P-ring protein EBA04_10815 PF02107 Flagellar L-ring protein EBA04_10820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EBA04_10820 PF00460 Flagella basal body rod protein EBA04_10830 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EBA04_10830 PF00460 Flagella basal body rod protein EBA04_10835 PF00460 Flagella basal body rod protein EBA04_10835 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EBA04_10835 PF07559 Flagellar basal body protein FlaE EBA04_10840 PF03963 Flagellar hook capping protein - N-terminal region EBA04_10845 PF00460 Flagella basal body rod protein EBA04_10845 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EBA04_10855 PF01584 CheW-like domain EBA04_10855 PF00072 Response regulator receiver domain EBA04_10875 PF13188 PAS domain EBA04_10875 PF00989 PAS fold EBA04_10875 PF00512 His Kinase A (phospho-acceptor) domain EBA04_10875 PF13426 PAS domain EBA04_10875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_10880 PF00990 Diguanylate cyclase, GGDEF domain EBA04_10880 PF03707 Bacterial signalling protein N terminal repeat EBA04_10880 PF00563 EAL domain EBA04_10885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_10885 PF07730 Histidine kinase EBA04_10890 PF03707 Bacterial signalling protein N terminal repeat EBA04_10890 PF00990 Diguanylate cyclase, GGDEF domain EBA04_10890 PF00563 EAL domain EBA04_10910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA04_10910 PF12729 Four helix bundle sensory module for signal transduction EBA04_10910 PF00672 HAMP domain EBA04_10915 PF04356 Protein of unknown function (DUF489) EBA04_10925 PF00293 NUDIX domain EBA04_10930 PF02617 ATP-dependent Clp protease adaptor protein ClpS EBA04_10935 PF00004 ATPase family associated with various cellular activities (AAA) EBA04_10935 PF02861 Clp amino terminal domain, pathogenicity island component EBA04_10935 PF07724 AAA domain (Cdc48 subfamily) EBA04_10935 PF10431 C-terminal, D2-small domain, of ClpB protein EBA04_10935 PF17871 AAA lid domain EBA04_10940 PF01176 Translation initiation factor 1A / IF-1 EBA04_10945 PF03588 Leucyl/phenylalanyl-tRNA protein transferase EBA04_10960 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA04_10965 PF09397 Ftsk gamma domain EBA04_10965 PF01580 FtsK/SpoIIIE family EBA04_10965 PF13491 4TM region of DNA translocase FtsK/SpoIIIE EBA04_10965 PF17854 FtsK alpha domain EBA04_10975 PF03548 Outer membrane lipoprotein carrier protein LolA EBA04_10990 PF12002 MgsA AAA+ ATPase C terminal EBA04_10990 PF16193 AAA C-terminal domain EBA04_10990 PF00004 ATPase family associated with various cellular activities (AAA) EBA04_11000 PF02537 CrcB-like protein, Camphor Resistance (CrcB) EBA04_11010 PF00654 Voltage gated chloride channel EBA04_11015 PF02803 Thiolase, C-terminal domain EBA04_11015 PF00108 Thiolase, N-terminal domain EBA04_11020 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EBA04_11020 PF00378 Enoyl-CoA hydratase/isomerase EBA04_11020 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EBA04_11030 PF00334 Nucleoside diphosphate kinase EBA04_11035 PF04055 Radical SAM superfamily EBA04_11045 PF13464 Domain of unknown function (DUF4115) EBA04_11055 PF01011 PQQ enzyme repeat EBA04_11055 PF13360 PQQ-like domain EBA04_11060 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EBA04_11060 PF01926 50S ribosome-binding GTPase EBA04_11065 PF03453 MoeA N-terminal region (domain I and II) EBA04_11065 PF03454 MoeA C-terminal region (domain IV) EBA04_11065 PF00994 Probable molybdopterin binding domain EBA04_11075 PF00899 ThiF family EBA04_11085 PF13936 Helix-turn-helix domain EBA04_11085 PF00665 Integrase core domain EBA04_11105 PF03453 MoeA N-terminal region (domain I and II) EBA04_11105 PF03454 MoeA C-terminal region (domain IV) EBA04_11105 PF00994 Probable molybdopterin binding domain EBA04_11110 PF12804 MobA-like NTP transferase domain EBA04_11135 PF10414 Sirohaem synthase dimerisation region EBA04_11135 PF14824 Sirohaem biosynthesis protein central EBA04_11135 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EBA04_11175 PF05598 Transposase domain (DUF772) EBA04_11175 PF01609 Transposase DDE domain EBA04_11200 PF08447 PAS fold EBA04_11200 PF00990 Diguanylate cyclase, GGDEF domain EBA04_11200 PF08448 PAS fold EBA04_11200 PF00563 EAL domain EBA04_11210 PF05598 Transposase domain (DUF772) EBA04_11220 PF00196 Bacterial regulatory proteins, luxR family EBA04_11220 PF00072 Response regulator receiver domain EBA04_11225 PF00072 Response regulator receiver domain EBA04_11225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_11225 PF08448 PAS fold EBA04_11225 PF00512 His Kinase A (phospho-acceptor) domain EBA04_11225 PF13426 PAS domain EBA04_11235 PF00873 AcrB/AcrD/AcrF family EBA04_11240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EBA04_11250 PF03797 Autotransporter beta-domain EBA04_11250 PF00082 Subtilase family EBA04_11260 PF04717 Type VI secretion system, phage-baseplate injector EBA04_11260 PF16671 Actin cross-linking domain EBA04_11265 PF03377 TAL effector repeat EBA04_11270 PF03377 TAL effector repeat EBA04_11275 PF03377 TAL effector repeat EBA04_11295 PF00975 Thioesterase domain EBA04_11295 PF00550 Phosphopantetheine attachment site EBA04_11295 PF00668 Condensation domain EBA04_11295 PF13193 AMP-binding enzyme C-terminal domain EBA04_11295 PF00501 AMP-binding enzyme EBA04_11300 PF13340 Putative transposase of IS4/5 family (DUF4096) EBA04_11305 PF13193 AMP-binding enzyme C-terminal domain EBA04_11305 PF00550 Phosphopantetheine attachment site EBA04_11305 PF00668 Condensation domain EBA04_11305 PF00501 AMP-binding enzyme EBA04_11310 PF00501 AMP-binding enzyme EBA04_11310 PF13193 AMP-binding enzyme C-terminal domain EBA04_11310 PF00668 Condensation domain EBA04_11310 PF00550 Phosphopantetheine attachment site EBA04_11315 PF00668 Condensation domain EBA04_11315 PF00550 Phosphopantetheine attachment site EBA04_11315 PF00501 AMP-binding enzyme EBA04_11315 PF13193 AMP-binding enzyme C-terminal domain EBA04_11320 PF00501 AMP-binding enzyme EBA04_11320 PF00975 Thioesterase domain EBA04_11320 PF00668 Condensation domain EBA04_11320 PF00550 Phosphopantetheine attachment site EBA04_11320 PF13193 AMP-binding enzyme C-terminal domain EBA04_11325 PF00501 AMP-binding enzyme EBA04_11325 PF13193 AMP-binding enzyme C-terminal domain EBA04_11325 PF00668 Condensation domain EBA04_11325 PF00550 Phosphopantetheine attachment site EBA04_11325 PF00975 Thioesterase domain EBA04_11330 PF00975 Thioesterase domain EBA04_11330 PF00668 Condensation domain EBA04_11330 PF13193 AMP-binding enzyme C-terminal domain EBA04_11330 PF00501 AMP-binding enzyme EBA04_11330 PF00975 Thioesterase domain EBA04_11330 PF13193 AMP-binding enzyme C-terminal domain EBA04_11330 PF00668 Condensation domain EBA04_11330 PF00501 AMP-binding enzyme EBA04_11330 PF00550 Phosphopantetheine attachment site EBA04_11330 PF00550 Phosphopantetheine attachment site EBA04_11340 PF00195 Chalcone and stilbene synthases, N-terminal domain EBA04_11340 PF02797 Chalcone and stilbene synthases, C-terminal domain EBA04_11350 PF00378 Enoyl-CoA hydratase/isomerase EBA04_11355 PF00155 Aminotransferase class I and II EBA04_11360 PF00378 Enoyl-CoA hydratase/isomerase EBA04_11365 PF00664 ABC transporter transmembrane region EBA04_11365 PF00005 ABC transporter EBA04_11370 PF03621 MbtH-like protein EBA04_11375 PF12706 Beta-lactamase superfamily domain EBA04_11375 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain EBA04_11420 PF02303 Helix-destabilising protein EBA04_11430 PF17091 Inovirus G7P protein EBA04_11485 PF00873 AcrB/AcrD/AcrF family EBA04_11490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EBA04_11490 PF00529 HlyD membrane-fusion protein of T1SS EBA04_11545 PF00486 Transcriptional regulatory protein, C terminal EBA04_11545 PF00072 Response regulator receiver domain EBA04_11550 PF03150 Di-haem cytochrome c peroxidase EBA04_11550 PF00034 Cytochrome c EBA04_11555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_11555 PF00512 His Kinase A (phospho-acceptor) domain EBA04_11560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA04_11560 PF03466 LysR substrate binding domain EBA04_11580 PF00069 Protein kinase domain EBA04_11620 PF16671 Actin cross-linking domain EBA04_11620 PF04717 Type VI secretion system, phage-baseplate injector EBA04_11645 PF00665 Integrase core domain EBA04_11645 PF13936 Helix-turn-helix domain EBA04_11660 PF01609 Transposase DDE domain EBA04_11660 PF05598 Transposase domain (DUF772) EBA04_11670 PF17871 AAA lid domain EBA04_11670 PF07724 AAA domain (Cdc48 subfamily) EBA04_11670 PF00004 ATPase family associated with various cellular activities (AAA) EBA04_11670 PF10431 C-terminal, D2-small domain, of ClpB protein EBA04_11695 PF05638 Type VI secretion system effector, Hcp EBA04_11745 PF01609 Transposase DDE domain EBA04_11745 PF05598 Transposase domain (DUF772) EBA04_11755 PF01106 NifU-like domain EBA04_11760 PF01329 Pterin 4 alpha carbinolamine dehydratase EBA04_11775 PF11737 Protein of unknown function (DUF3300) EBA04_11780 PF00849 RNA pseudouridylate synthase EBA04_11780 PF01479 S4 domain EBA04_11785 PF12111 Polyribonucleotide phosphorylase C terminal EBA04_11785 PF10150 Ribonuclease E/G family EBA04_11785 PF00575 S1 RNA binding domain EBA04_11795 PF00196 Bacterial regulatory proteins, luxR family EBA04_11795 PF00072 Response regulator receiver domain EBA04_11810 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EBA04_11820 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EBA04_11820 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EBA04_11820 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EBA04_11830 PF01648 4'-phosphopantetheinyl transferase superfamily EBA04_11830 PF17837 4'-phosphopantetheinyl transferase N-terminal domain EBA04_11855 PF01066 CDP-alcohol phosphatidyltransferase EBA04_11860 PF01541 GIY-YIG catalytic domain EBA04_11860 PF08459 UvrC Helix-hairpin-helix N-terminal EBA04_11860 PF02151 UvrB/uvrC motif EBA04_11870 PF01451 Low molecular weight phosphotyrosine protein phosphatase EBA04_11875 PF02348 Cytidylyltransferase EBA04_11880 PF02606 Tetraacyldisaccharide-1-P 4'-kinase EBA04_11885 PF00664 ABC transporter transmembrane region EBA04_11885 PF00005 ABC transporter EBA04_11890 PF02472 Biopolymer transport protein ExbD/TolR EBA04_11895 PF01618 MotA/TolQ/ExbB proton channel family EBA04_11900 PF03772 Competence protein EBA04_11900 PF00753 Metallo-beta-lactamase superfamily EBA04_11915 PF00005 ABC transporter EBA04_11920 PF12704 MacB-like periplasmic core domain EBA04_11920 PF02687 FtsX-like permease family EBA04_11930 PF03937 Flavinator of succinate dehydrogenase EBA04_11935 PF13085 2Fe-2S iron-sulfur cluster binding domain EBA04_11945 PF00890 FAD binding domain EBA04_11945 PF02910 Fumarate reductase flavoprotein C-term EBA04_11950 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EBA04_11955 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EBA04_11965 PF01571 Aminomethyltransferase folate-binding domain EBA04_11975 PF00005 ABC transporter EBA04_11975 PF17912 MalK OB fold domain EBA04_11980 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EBA04_11980 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EBA04_11985 PF02685 Glucokinase EBA04_11990 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EBA04_11995 PF00920 Dehydratase family EBA04_12000 PF01081 KDPG and KHG aldolase EBA04_12035 PF00034 Cytochrome c EBA04_12080 PF00512 His Kinase A (phospho-acceptor) domain EBA04_12080 PF00072 Response regulator receiver domain EBA04_12080 PF09308 LuxQ, periplasmic EBA04_12080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_12095 PF00575 S1 RNA binding domain EBA04_12095 PF16921 Tex protein YqgF-like domain EBA04_12095 PF09371 Tex-like protein N-terminal domain EBA04_12095 PF17674 HHH domain EBA04_12105 PF00355 Rieske [2Fe-2S] domain EBA04_12105 PF01266 FAD dependent oxidoreductase EBA04_12120 PF00561 alpha/beta hydrolase fold EBA04_12130 PF01066 CDP-alcohol phosphatidyltransferase EBA04_12150 PF03618 Kinase/pyrophosphorylase EBA04_12155 PF00391 PEP-utilising enzyme, mobile domain EBA04_12155 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain EBA04_12155 PF02896 PEP-utilising enzyme, TIM barrel domain EBA04_12160 PF00924 Mechanosensitive ion channel EBA04_12160 PF05552 Conserved TM helix EBA04_12165 PF00929 Exonuclease EBA04_12170 PF14437 MafB19-like deaminase EBA04_12175 PF01325 Iron dependent repressor, N-terminal DNA binding domain EBA04_12175 PF02742 Iron dependent repressor, metal binding and dimerisation domain EBA04_12180 PF01566 Natural resistance-associated macrophage protein EBA04_12210 PF03466 LysR substrate binding domain EBA04_12210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA04_12215 PF03601 Conserved hypothetical protein 698 EBA04_12235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA04_12235 PF03466 LysR substrate binding domain EBA04_12240 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EBA04_12240 PF00361 Proton-conducting membrane transporter EBA04_12240 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus EBA04_12245 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) EBA04_12250 PF00958 GMP synthase C terminal domain EBA04_12250 PF00117 Glutamine amidotransferase class-I EBA04_12250 PF02540 NAD synthase EBA04_12255 PF00571 CBS domain EBA04_12255 PF00478 IMP dehydrogenase / GMP reductase domain EBA04_12260 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EBA04_12260 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EBA04_12275 PF00483 Nucleotidyl transferase EBA04_12280 PF02719 Polysaccharide biosynthesis protein EBA04_12285 PF00953 Glycosyl transferase family 4 EBA04_12290 PF18073 Rubredoxin metal binding domain EBA04_12300 PF00216 Bacterial DNA-binding protein EBA04_12305 PF00575 S1 RNA binding domain EBA04_12310 PF02224 Cytidylate kinase EBA04_12315 PF00444 Ribosomal protein L36 EBA04_12325 PF04371 Porphyromonas-type peptidyl-arginine deiminase EBA04_12335 PF00795 Carbon-nitrogen hydrolase EBA04_12360 PF00528 Binding-protein-dependent transport system inner membrane component EBA04_12365 PF00528 Binding-protein-dependent transport system inner membrane component EBA04_12385 PF00356 Bacterial regulatory proteins, lacI family EBA04_12395 PF03795 YCII-related domain EBA04_12400 PF02616 Segregation and condensation protein ScpA EBA04_12405 PF04079 Segregation and condensation complex subunit ScpB EBA04_12410 PF01479 S4 domain EBA04_12410 PF00849 RNA pseudouridylate synthase EBA04_12425 PF00795 Carbon-nitrogen hydrolase EBA04_12430 PF00155 Aminotransferase class I and II EBA04_12435 PF00005 ABC transporter EBA04_12440 PF03379 CcmB protein EBA04_12445 PF01578 Cytochrome C assembly protein EBA04_12455 PF03100 CcmE EBA04_12460 PF01578 Cytochrome C assembly protein EBA04_12460 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal EBA04_12465 PF08534 Redoxin EBA04_12470 PF03918 Cytochrome C biogenesis protein EBA04_12480 PF00561 alpha/beta hydrolase fold EBA04_12485 PF00313 'Cold-shock' DNA-binding domain EBA04_12495 PF00005 ABC transporter EBA04_12495 PF00664 ABC transporter transmembrane region EBA04_12500 PF00005 ABC transporter EBA04_12500 PF00664 ABC transporter transmembrane region EBA04_12510 PF01654 Cytochrome bd terminal oxidase subunit I EBA04_12540 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain EBA04_12540 PF02129 X-Pro dipeptidyl-peptidase (S15 family) EBA04_12545 PF00171 Aldehyde dehydrogenase family EBA04_12550 PF00696 Amino acid kinase family EBA04_12550 PF01472 PUA domain EBA04_12565 PF00206 Lyase EBA04_12570 PF01118 Semialdehyde dehydrogenase, NAD binding domain EBA04_12580 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase EBA04_12580 PF00696 Amino acid kinase family EBA04_12585 PF07687 Peptidase dimerisation domain EBA04_12585 PF01546 Peptidase family M20/M25/M40 EBA04_12590 PF00764 Arginosuccinate synthase EBA04_12595 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EBA04_12595 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EBA04_12605 PF01406 tRNA synthetases class I (C) catalytic domain EBA04_12605 PF09190 DALR domain EBA04_12610 PF02657 Fe-S metabolism associated domain EBA04_12625 PF01258 Prokaryotic dksA/traR C4-type zinc finger EBA04_12630 PF01809 Putative membrane protein insertion efficiency factor EBA04_12635 PF01979 Amidohydrolase family EBA04_12640 PF08460 Bacterial SH3 domain EBA04_12640 PF01551 Peptidase family M23 EBA04_12650 PF05985 Ethanolamine ammonia-lyase light chain (EutC) EBA04_12665 PF01095 Pectinesterase EBA04_12675 PF00295 Glycosyl hydrolases family 28 EBA04_12690 PF13419 Haloacid dehalogenase-like hydrolase EBA04_12700 PF01979 Amidohydrolase family EBA04_12715 PF01132 Elongation factor P (EF-P) OB domain EBA04_12715 PF08207 Elongation factor P (EF-P) KOW-like domain EBA04_12715 PF09285 Elongation factor P, C-terminal EBA04_12720 PF04055 Radical SAM superfamily EBA04_12725 PF13188 PAS domain EBA04_12725 PF03707 Bacterial signalling protein N terminal repeat EBA04_12725 PF00990 Diguanylate cyclase, GGDEF domain EBA04_12725 PF00563 EAL domain EBA04_12735 PF00588 SpoU rRNA Methylase family EBA04_12740 PF00459 Inositol monophosphatase family EBA04_12745 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EBA04_12745 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EBA04_12750 PF00545 ribonuclease EBA04_12775 PF00271 Helicase conserved C-terminal domain EBA04_12775 PF03880 DbpA RNA binding domain EBA04_12775 PF00270 DEAD/DEAH box helicase EBA04_12780 PF00156 Phosphoribosyl transferase domain EBA04_12785 PF02696 Uncharacterized ACR, YdiU/UPF0061 family EBA04_12795 PF02798 Glutathione S-transferase, N-terminal domain EBA04_12795 PF14497 Glutathione S-transferase, C-terminal domain EBA04_12800 PF00313 'Cold-shock' DNA-binding domain EBA04_12805 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 EBA04_12810 PF07152 YaeQ protein EBA04_12820 PF00990 Diguanylate cyclase, GGDEF domain EBA04_12820 PF00498 FHA domain EBA04_12820 PF00563 EAL domain EBA04_12825 PF01435 Peptidase family M48 EBA04_12830 PF00749 tRNA synthetases class I (E and Q), catalytic domain EBA04_12835 PF00106 short chain dehydrogenase EBA04_12840 PF07879 PHB/PHA accumulation regulator DNA-binding domain EBA04_12840 PF05233 PHB accumulation regulatory domain EBA04_12855 PF01119 DNA mismatch repair protein, C-terminal domain EBA04_12855 PF08676 MutL C terminal dimerisation domain EBA04_12860 PF11741 AMIN domain EBA04_12860 PF01520 N-acetylmuramoyl-L-alanine amidase EBA04_12865 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE EBA04_12870 PF01256 Carbohydrate kinase EBA04_12870 PF03853 YjeF-related protein N-terminus EBA04_12875 PF08331 Domain of unknown function (DUF1730) EBA04_12880 PF13742 OB-fold nucleic acid binding domain EBA04_12880 PF02601 Exonuclease VII, large subunit EBA04_12895 PF05598 Transposase domain (DUF772) EBA04_12895 PF01609 Transposase DDE domain EBA04_12905 PF03781 Sulfatase-modifying factor enzyme 1 EBA04_12920 PF00570 HRDC domain EBA04_12920 PF01612 3'-5' exonuclease EBA04_12955 PF01584 CheW-like domain EBA04_12960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA04_12960 PF02743 Cache domain EBA04_12960 PF00672 HAMP domain EBA04_12990 PF04386 Stringent starvation protein B EBA04_12995 PF02798 Glutathione S-transferase, N-terminal domain EBA04_12995 PF00043 Glutathione S-transferase, C-terminal domain EBA04_13000 PF02167 Cytochrome C1 family EBA04_13005 PF00033 Cytochrome b/b6/petB EBA04_13005 PF00032 Cytochrome b(C-terminal)/b6/petD EBA04_13010 PF00355 Rieske [2Fe-2S] domain EBA04_13010 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal EBA04_13020 PF01464 Transglycosylase SLT domain EBA04_13040 PF04055 Radical SAM superfamily EBA04_13040 PF01938 TRAM domain EBA04_13040 PF00919 Uncharacterized protein family UPF0004 EBA04_13045 PF02562 PhoH-like protein EBA04_13055 PF02130 Uncharacterized protein family UPF0054 EBA04_13065 PF03471 Transporter associated domain EBA04_13065 PF00571 CBS domain EBA04_13080 PF00171 Aldehyde dehydrogenase family EBA04_13085 PF00528 Binding-protein-dependent transport system inner membrane component EBA04_13090 PF00528 Binding-protein-dependent transport system inner membrane component EBA04_13100 PF00005 ABC transporter EBA04_13100 PF08402 TOBE domain EBA04_13105 PF02321 Outer membrane efflux protein EBA04_13110 PF07690 Major Facilitator Superfamily EBA04_13115 PF13533 Biotin-lipoyl like EBA04_13130 PF05598 Transposase domain (DUF772) EBA04_13130 PF01609 Transposase DDE domain EBA04_13145 PF00120 Glutamine synthetase, catalytic domain EBA04_13155 PF00120 Glutamine synthetase, catalytic domain EBA04_13160 PF01266 FAD dependent oxidoreductase EBA04_13165 PF00072 Response regulator receiver domain EBA04_13165 PF00990 Diguanylate cyclase, GGDEF domain EBA04_13170 PF00083 Sugar (and other) transporter EBA04_13170 PF07690 Major Facilitator Superfamily EBA04_13180 PF00384 Molybdopterin oxidoreductase EBA04_13185 PF02634 FdhD/NarQ family EBA04_13190 PF07690 Major Facilitator Superfamily EBA04_13200 PF00202 Aminotransferase class-III EBA04_13205 PF00005 ABC transporter EBA04_13215 PF04286 Protein of unknown function (DUF445) EBA04_13225 PF00072 Response regulator receiver domain EBA04_13230 PF05598 Transposase domain (DUF772) EBA04_13230 PF01609 Transposase DDE domain EBA04_13270 PF05598 Transposase domain (DUF772) EBA04_13280 PF05598 Transposase domain (DUF772) EBA04_13280 PF01609 Transposase DDE domain EBA04_13290 PF05088 Bacterial NAD-glutamate dehydrogenase EBA04_13300 PF00529 HlyD membrane-fusion protein of T1SS EBA04_13300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EBA04_13305 PF00873 AcrB/AcrD/AcrF family EBA04_13320 PF00356 Bacterial regulatory proteins, lacI family EBA04_13325 PF00391 PEP-utilising enzyme, mobile domain EBA04_13325 PF00381 PTS HPr component phosphorylation site EBA04_13325 PF05524 PEP-utilising enzyme, N-terminal EBA04_13325 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EBA04_13325 PF02896 PEP-utilising enzyme, TIM barrel domain EBA04_13330 PF00294 pfkB family carbohydrate kinase EBA04_13335 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EBA04_13345 PF16671 Actin cross-linking domain EBA04_13345 PF04717 Type VI secretion system, phage-baseplate injector EBA04_13365 PF05598 Transposase domain (DUF772) EBA04_13385 PF07549 SecD/SecF GG Motif EBA04_13385 PF02355 Protein export membrane protein EBA04_13390 PF07549 SecD/SecF GG Motif EBA04_13390 PF13721 SecD export protein N-terminal TM region EBA04_13390 PF02355 Protein export membrane protein EBA04_13395 PF02699 Preprotein translocase subunit EBA04_13400 PF01702 Queuine tRNA-ribosyltransferase EBA04_13405 PF02547 Queuosine biosynthesis protein EBA04_13470 PF00037 4Fe-4S binding domain EBA04_13485 PF01467 Cytidylyltransferase-like EBA04_13495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_13495 PF00183 Hsp90 protein EBA04_13505 PF05598 Transposase domain (DUF772) EBA04_13530 PF04616 Glycosyl hydrolases family 43 EBA04_13535 PF07532 Bacterial Ig-like domain (group 4) EBA04_13540 PF07715 TonB-dependent Receptor Plug Domain EBA04_13540 PF00593 TonB dependent receptor EBA04_13555 PF00082 Subtilase family EBA04_13555 PF09286 Pro-kumamolisin, activation domain EBA04_13595 PF05598 Transposase domain (DUF772) EBA04_13595 PF01609 Transposase DDE domain EBA04_13600 PF01609 Transposase DDE domain EBA04_13600 PF05598 Transposase domain (DUF772) EBA04_13610 PF13520 Amino acid permease EBA04_13625 PF00557 Metallopeptidase family M24 EBA04_13625 PF01321 Creatinase/Prolidase N-terminal domain EBA04_13630 PF00171 Aldehyde dehydrogenase family EBA04_13635 PF00701 Dihydrodipicolinate synthetase family EBA04_13640 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA04_13640 PF04324 BFD-like [2Fe-2S] binding domain EBA04_13650 PF01266 FAD dependent oxidoreductase EBA04_13655 PF05544 Proline racemase EBA04_13665 PF00448 SRP54-type protein, GTPase domain EBA04_13665 PF02881 SRP54-type protein, helical bundle domain EBA04_13680 PF00730 HhH-GPD superfamily base excision DNA repair protein EBA04_13680 PF14815 NUDIX domain EBA04_13680 PF10576 Iron-sulfur binding domain of endonuclease III EBA04_13680 PF00633 Helix-hairpin-helix motif EBA04_13685 PF04362 Bacterial Fe(2+) trafficking EBA04_13690 PF00072 Response regulator receiver domain EBA04_13690 PF13426 PAS domain EBA04_13690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_13720 PF08212 Lipocalin-like domain EBA04_13730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EBA04_13730 PF12806 Acetyl-CoA dehydrogenase C-terminal like EBA04_13730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EBA04_13730 PF02770 Acyl-CoA dehydrogenase, middle domain EBA04_13740 PF13292 1-deoxy-D-xylulose-5-phosphate synthase EBA04_13740 PF02779 Transketolase, pyrimidine binding domain EBA04_13740 PF02780 Transketolase, C-terminal domain EBA04_13760 PF03808 Glycosyl transferase WecB/TagA/CpsF family EBA04_13775 PF14667 Polysaccharide biosynthesis C-terminal domain EBA04_13785 PF00534 Glycosyl transferases group 1 EBA04_13785 PF13439 Glycosyltransferase Family 4 EBA04_13805 PF02397 Bacterial sugar transferase EBA04_13825 PF13411 MerR HTH family regulatory protein EBA04_13830 PF00216 Bacterial DNA-binding protein EBA04_13835 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EBA04_13835 PF01588 Putative tRNA binding domain EBA04_13835 PF03147 Ferredoxin-fold anticodon binding domain EBA04_13835 PF03483 B3/4 domain EBA04_13835 PF03484 tRNA synthetase B5 domain EBA04_13840 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EBA04_13840 PF01409 tRNA synthetases class II core domain (F) EBA04_13845 PF00453 Ribosomal protein L20 EBA04_13850 PF01632 Ribosomal protein L35 EBA04_13855 PF00707 Translation initiation factor IF-3, C-terminal domain EBA04_13855 PF05198 Translation initiation factor IF-3, N-terminal domain EBA04_13860 PF03129 Anticodon binding domain EBA04_13860 PF02824 TGS domain EBA04_13860 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EBA04_13860 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EBA04_13875 PF03989 DNA gyrase C-terminal domain, beta-propeller EBA04_13875 PF00521 DNA gyrase/topoisomerase IV, subunit A EBA04_13880 PF01008 Initiation factor 2 subunit family EBA04_13895 PF00152 tRNA synthetases class II (D, K and N) EBA04_13900 PF12826 Helix-hairpin-helix motif EBA04_13900 PF03119 NAD-dependent DNA ligase C4 zinc finger domain EBA04_13900 PF03120 NAD-dependent DNA ligase OB-fold domain EBA04_13900 PF01653 NAD-dependent DNA ligase adenylation domain EBA04_13900 PF00533 BRCA1 C Terminus (BRCT) domain EBA04_13905 PF00155 Aminotransferase class I and II EBA04_13910 PF04354 ZipA, C-terminal FtsZ-binding domain EBA04_13915 PF02463 RecF/RecN/SMC N terminal domain EBA04_13920 PF01281 Ribosomal protein L9, N-terminal domain EBA04_13920 PF03948 Ribosomal protein L9, C-terminal domain EBA04_13925 PF01084 Ribosomal protein S18 EBA04_13930 PF01250 Ribosomal protein S6 EBA04_13935 PF01521 Iron-sulphur cluster biosynthesis EBA04_13945 PF00152 tRNA synthetases class II (D, K and N) EBA04_13945 PF01336 OB-fold nucleic acid binding domain EBA04_13970 PF00484 Carbonic anhydrase EBA04_13975 PF06052 3-hydroxyanthranilic acid dioxygenase EBA04_13995 PF00266 Aminotransferase class-V EBA04_14000 PF01494 FAD binding domain EBA04_14005 PF00929 Exonuclease EBA04_14005 PF08411 Exonuclease C-terminal EBA04_14015 PF00248 Aldo/keto reductase family EBA04_14030 PF01513 ATP-NAD kinase EBA04_14045 PF10672 S-adenosylmethionine-dependent methyltransferase EBA04_14045 PF01170 Putative RNA methylase family UPF0020 EBA04_14045 PF02926 THUMP domain EBA04_14085 PF00581 Rhodanese-like domain EBA04_14090 PF00293 NUDIX domain EBA04_14095 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EBA04_14095 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EBA04_14100 PF00378 Enoyl-CoA hydratase/isomerase EBA04_14110 PF00730 HhH-GPD superfamily base excision DNA repair protein EBA04_14110 PF00633 Helix-hairpin-helix motif EBA04_14110 PF10576 Iron-sulfur binding domain of endonuclease III EBA04_14115 PF01740 STAS domain EBA04_14115 PF00916 Sulfate permease family EBA04_14120 PF00484 Carbonic anhydrase EBA04_14135 PF12849 PBP superfamily domain EBA04_14140 PF12849 PBP superfamily domain EBA04_14145 PF00528 Binding-protein-dependent transport system inner membrane component EBA04_14150 PF00528 Binding-protein-dependent transport system inner membrane component EBA04_14155 PF00005 ABC transporter EBA04_14160 PF01895 PhoU domain EBA04_14170 PF00929 Exonuclease EBA04_14180 PF08032 RNA 2'-O ribose methyltransferase substrate binding EBA04_14180 PF00588 SpoU rRNA Methylase family EBA04_14195 PF00773 RNB domain EBA04_14195 PF00575 S1 RNA binding domain EBA04_14195 PF08461 Ribonuclease R winged-helix domain EBA04_14195 PF17876 Cold shock domain EBA04_14195 PF08206 Ribonuclease B OB domain EBA04_14225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EBA04_14225 PF02770 Acyl-CoA dehydrogenase, middle domain EBA04_14225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EBA04_14230 PF01209 ubiE/COQ5 methyltransferase family EBA04_14235 PF02574 Homocysteine S-methyltransferase EBA04_14235 PF00809 Pterin binding enzyme EBA04_14240 PF02607 B12 binding domain EBA04_14240 PF02965 Vitamin B12 dependent methionine synthase, activation domain EBA04_14240 PF00809 Pterin binding enzyme EBA04_14240 PF02574 Homocysteine S-methyltransferase EBA04_14240 PF02310 B12 binding domain EBA04_14250 PF00294 pfkB family carbohydrate kinase EBA04_14255 PF07690 Major Facilitator Superfamily EBA04_14275 PF04102 SlyX EBA04_14280 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EBA04_14280 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EBA04_14280 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EBA04_14285 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EBA04_14285 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EBA04_14290 PF00255 Glutathione peroxidase EBA04_14300 PF00392 Bacterial regulatory proteins, gntR family EBA04_14305 PF00005 ABC transporter EBA04_14335 PF00206 Lyase EBA04_14335 PF10415 Fumarase C C-terminus EBA04_14345 PF05598 Transposase domain (DUF772) EBA04_14345 PF01609 Transposase DDE domain EBA04_14360 PF08328 Adenylosuccinate lyase C-terminal EBA04_14360 PF00206 Lyase EBA04_14375 PF08007 Cupin superfamily protein EBA04_14385 PF02779 Transketolase, pyrimidine binding domain EBA04_14385 PF16870 2-oxoglutarate dehydrogenase C-terminal EBA04_14385 PF00676 Dehydrogenase E1 component EBA04_14385 PF16078 2-oxoglutarate dehydrogenase N-terminus EBA04_14390 PF00364 Biotin-requiring enzyme EBA04_14390 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EBA04_14390 PF02817 e3 binding domain EBA04_14395 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EBA04_14395 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA04_14400 PF03641 Possible lysine decarboxylase EBA04_14405 PF01205 Uncharacterized protein family UPF0029 EBA04_14410 PF00664 ABC transporter transmembrane region EBA04_14410 PF00005 ABC transporter EBA04_14440 PF08543 Phosphomethylpyrimidine kinase EBA04_14450 PF00684 DnaJ central domain EBA04_14450 PF01556 DnaJ C terminal domain EBA04_14450 PF00226 DnaJ domain EBA04_14455 PF00012 Hsp70 protein EBA04_14460 PF01025 GrpE EBA04_14465 PF01628 HrcA protein C terminal domain EBA04_14465 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding EBA04_14470 PF02463 RecF/RecN/SMC N terminal domain EBA04_14475 PF01475 Ferric uptake regulator family EBA04_14480 PF04355 SmpA / OmlA family EBA04_14490 PF03658 RnfH family Ubiquitin EBA04_14500 PF01668 SmpB protein EBA04_14505 PF00082 Subtilase family EBA04_14525 PF01609 Transposase DDE domain EBA04_14525 PF05598 Transposase domain (DUF772) EBA04_14530 PF05598 Transposase domain (DUF772) EBA04_14570 PF01053 Cys/Met metabolism PLP-dependent enzyme EBA04_14580 PF07722 Peptidase C26 EBA04_14585 PF01810 LysE type translocator EBA04_14590 PF04204 Homoserine O-succinyltransferase EBA04_14595 PF00120 Glutamine synthetase, catalytic domain EBA04_14605 PF05598 Transposase domain (DUF772) EBA04_14625 PF08448 PAS fold EBA04_14625 PF00990 Diguanylate cyclase, GGDEF domain EBA04_14640 PF00691 OmpA family EBA04_14640 PF05736 OprF membrane domain EBA04_14660 PF03441 FAD binding domain of DNA photolyase EBA04_14660 PF00875 DNA photolyase EBA04_14665 PF00772 DnaB-like helicase N terminal domain EBA04_14665 PF03796 DnaB-like helicase C terminal domain EBA04_14670 PF03358 NADPH-dependent FMN reductase EBA04_14675 PF13537 Glutamine amidotransferase domain EBA04_14675 PF00733 Asparagine synthase EBA04_14680 PF13417 Glutathione S-transferase, N-terminal domain EBA04_14705 PF01026 TatD related DNase EBA04_14710 PF00899 ThiF family EBA04_14725 PF00313 'Cold-shock' DNA-binding domain EBA04_14750 PF02203 Tar ligand binding domain homologue EBA04_14750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA04_14750 PF00672 HAMP domain EBA04_14755 PF05598 Transposase domain (DUF772) EBA04_14765 PF05598 Transposase domain (DUF772) EBA04_14765 PF01609 Transposase DDE domain EBA04_14780 PF05598 Transposase domain (DUF772) EBA04_14780 PF01609 Transposase DDE domain EBA04_14795 PF05681 Fumarate hydratase (Fumerase) EBA04_14795 PF05683 Fumarase C-terminus EBA04_14805 PF00005 ABC transporter EBA04_14810 PF00970 Oxidoreductase FAD-binding domain EBA04_14810 PF00175 Oxidoreductase NAD-binding domain EBA04_14815 PF00255 Glutathione peroxidase EBA04_14845 PF04542 Sigma-70 region 2 EBA04_14845 PF08281 Sigma-70, region 4 EBA04_14855 PF12802 MarR family EBA04_14890 PF14310 Fibronectin type III-like domain EBA04_14890 PF00933 Glycosyl hydrolase family 3 N terminal domain EBA04_14890 PF01915 Glycosyl hydrolase family 3 C-terminal domain EBA04_14915 PF07690 Major Facilitator Superfamily EBA04_14920 PF00529 HlyD membrane-fusion protein of T1SS EBA04_14920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EBA04_14925 PF02321 Outer membrane efflux protein EBA04_14935 PF12833 Helix-turn-helix domain EBA04_14940 PF00521 DNA gyrase/topoisomerase IV, subunit A EBA04_14940 PF03989 DNA gyrase C-terminal domain, beta-propeller EBA04_14950 PF00210 Ferritin-like domain EBA04_14955 PF01804 Penicillin amidase EBA04_14965 PF00593 TonB dependent receptor EBA04_14965 PF07715 TonB-dependent Receptor Plug Domain EBA04_14975 PF13537 Glutamine amidotransferase domain EBA04_14975 PF00733 Asparagine synthase EBA04_14980 PF01546 Peptidase family M20/M25/M40 EBA04_14980 PF07687 Peptidase dimerisation domain EBA04_14990 PF03960 ArsC family EBA04_15000 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal EBA04_15000 PF14602 Hexapeptide repeat of succinyl-transferase EBA04_15000 PF00132 Bacterial transferase hexapeptide (six repeats) EBA04_15005 PF01909 Nucleotidyltransferase domain EBA04_15005 PF08335 GlnD PII-uridylyltransferase EBA04_15005 PF01966 HD domain EBA04_15010 PF00557 Metallopeptidase family M24 EBA04_15045 PF00318 Ribosomal protein S2 EBA04_15050 PF00889 Elongation factor TS EBA04_15060 PF00696 Amino acid kinase family EBA04_15065 PF01765 Ribosome recycling factor EBA04_15070 PF01255 Putative undecaprenyl diphosphate synthase EBA04_15080 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain EBA04_15080 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase EBA04_15080 PF13288 DXP reductoisomerase C-terminal domain EBA04_15085 PF17820 PDZ domain EBA04_15085 PF02163 Peptidase family M50 EBA04_15090 PF07244 Surface antigen variable number repeat EBA04_15090 PF01103 Surface antigen EBA04_15100 PF00132 Bacterial transferase hexapeptide (six repeats) EBA04_15100 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD EBA04_15105 PF07977 FabA-like domain EBA04_15110 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 EBA04_15110 PF00132 Bacterial transferase hexapeptide (six repeats) EBA04_15115 PF02684 Lipid-A-disaccharide synthetase EBA04_15120 PF01351 Ribonuclease HII EBA04_15125 PF01336 OB-fold nucleic acid binding domain EBA04_15125 PF02811 PHP domain EBA04_15125 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EBA04_15125 PF07733 Bacterial DNA polymerase III alpha NTPase domain EBA04_15125 PF14579 Helix-hairpin-helix motif EBA04_15130 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit EBA04_15205 PF02592 Putative vitamin uptake transporter EBA04_15220 PF02574 Homocysteine S-methyltransferase EBA04_15225 PF00324 Amino acid permease EBA04_15230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EBA04_15240 PF01588 Putative tRNA binding domain EBA04_15240 PF09334 tRNA synthetases class I (M) EBA04_15250 PF04060 Putative Fe-S cluster EBA04_15270 PF04545 Sigma-70, region 4 EBA04_15270 PF04542 Sigma-70 region 2 EBA04_15315 PF01042 Endoribonuclease L-PSP EBA04_15325 PF03706 Lysylphosphatidylglycerol synthase TM region EBA04_15325 PF09924 Uncharacterised conserved protein (DUF2156) EBA04_15365 PF07690 Major Facilitator Superfamily EBA04_15370 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EBA04_15385 PF08274 PhnA Zinc-Ribbon EBA04_15385 PF03831 PhnA domain EBA04_15395 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EBA04_15430 PF08281 Sigma-70, region 4 EBA04_15430 PF04542 Sigma-70 region 2 EBA04_15430 PF12680 SnoaL-like domain EBA04_15440 PF01258 Prokaryotic dksA/traR C4-type zinc finger EBA04_15450 PF07043 Protein of unknown function (DUF1328) EBA04_15455 PF01863 Protein of unknown function DUF45 EBA04_15465 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EBA04_15465 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EBA04_15470 PF03797 Autotransporter beta-domain EBA04_15470 PF12951 Passenger-associated-transport-repeat EBA04_15470 PF00082 Subtilase family EBA04_15475 PF00108 Thiolase, N-terminal domain EBA04_15475 PF02803 Thiolase, C-terminal domain EBA04_15490 PF00072 Response regulator receiver domain EBA04_15490 PF00990 Diguanylate cyclase, GGDEF domain EBA04_15505 PF01068 ATP dependent DNA ligase domain EBA04_15505 PF04679 ATP dependent DNA ligase C terminal region EBA04_15505 PF04675 DNA ligase N terminus EBA04_15515 PF04675 DNA ligase N terminus EBA04_15515 PF04679 ATP dependent DNA ligase C terminal region EBA04_15515 PF01068 ATP dependent DNA ligase domain EBA04_15520 PF00271 Helicase conserved C-terminal domain EBA04_15520 PF08494 DEAD/H associated EBA04_15520 PF00270 DEAD/DEAH box helicase EBA04_15540 PF00313 'Cold-shock' DNA-binding domain EBA04_15545 PF01048 Phosphorylase superfamily EBA04_15555 PF00933 Glycosyl hydrolase family 3 N terminal domain EBA04_15560 PF04244 Deoxyribodipyrimidine photo-lyase-related protein EBA04_15565 PF01593 Flavin containing amine oxidoreductase EBA04_15580 PF05958 tRNA (Uracil-5-)-methyltransferase EBA04_15590 PF02565 Recombination protein O C terminal EBA04_15590 PF11967 Recombination protein O N terminal EBA04_15595 PF01926 50S ribosome-binding GTPase EBA04_15595 PF07650 KH domain EBA04_15600 PF00035 Double-stranded RNA binding motif EBA04_15600 PF14622 Ribonuclease-III-like EBA04_15610 PF10502 Signal peptidase, peptidase S26 EBA04_15615 PF00679 Elongation factor G C-terminus EBA04_15615 PF06421 GTP-binding protein LepA C-terminus EBA04_15615 PF03144 Elongation factor Tu domain 2 EBA04_15615 PF00009 Elongation factor Tu GTP binding domain EBA04_15620 PF13180 PDZ domain EBA04_15630 PF04542 Sigma-70 region 2 EBA04_15630 PF08281 Sigma-70, region 4 EBA04_15635 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EBA04_15635 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EBA04_15635 PF00378 Enoyl-CoA hydratase/isomerase EBA04_15640 PF01545 Cation efflux family EBA04_15645 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EBA04_15645 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EBA04_15650 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EBA04_15650 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EBA04_15650 PF00378 Enoyl-CoA hydratase/isomerase EBA04_15655 PF00378 Enoyl-CoA hydratase/isomerase EBA04_15660 PF02770 Acyl-CoA dehydrogenase, middle domain EBA04_15660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EBA04_15660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EBA04_15665 PF00171 Aldehyde dehydrogenase family EBA04_15670 PF01381 Helix-turn-helix EBA04_15670 PF06114 IrrE N-terminal-like domain EBA04_15670 PF09856 Predicted transcriptional regulator (DUF2083) EBA04_15685 PF05598 Transposase domain (DUF772) EBA04_15710 PF00672 HAMP domain EBA04_15710 PF01627 Hpt domain EBA04_15710 PF00512 His Kinase A (phospho-acceptor) domain EBA04_15710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_15710 PF17149 Periplasmic sensor domain found in signal transduction proteins EBA04_15710 PF00072 Response regulator receiver domain EBA04_15720 PF17149 Periplasmic sensor domain found in signal transduction proteins EBA04_15720 PF00672 HAMP domain EBA04_15720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_15720 PF00512 His Kinase A (phospho-acceptor) domain EBA04_15720 PF01627 Hpt domain EBA04_15720 PF00072 Response regulator receiver domain EBA04_15725 PF17149 Periplasmic sensor domain found in signal transduction proteins EBA04_15725 PF00672 HAMP domain EBA04_15725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_15725 PF00512 His Kinase A (phospho-acceptor) domain EBA04_15725 PF01627 Hpt domain EBA04_15725 PF00072 Response regulator receiver domain EBA04_15730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_15730 PF00672 HAMP domain EBA04_15730 PF17149 Periplasmic sensor domain found in signal transduction proteins EBA04_15730 PF00072 Response regulator receiver domain EBA04_15730 PF01627 Hpt domain EBA04_15730 PF00512 His Kinase A (phospho-acceptor) domain EBA04_15735 PF04264 YceI-like domain EBA04_15760 PF03313 Serine dehydratase alpha chain EBA04_15760 PF03315 Serine dehydratase beta chain EBA04_15770 PF01053 Cys/Met metabolism PLP-dependent enzyme EBA04_15775 PF00561 alpha/beta hydrolase fold EBA04_15780 PF01476 LysM domain EBA04_15780 PF01551 Peptidase family M23 EBA04_15780 PF08525 Opacity-associated protein A N-terminal motif EBA04_15785 PF00009 Elongation factor Tu GTP binding domain EBA04_15785 PF16658 Class II release factor RF3, C-terminal domain EBA04_15790 PF03006 Haemolysin-III related EBA04_15800 PF05598 Transposase domain (DUF772) EBA04_15810 PF00571 CBS domain EBA04_15810 PF00478 IMP dehydrogenase / GMP reductase domain EBA04_15815 PF00535 Glycosyl transferase family 2 EBA04_15820 PF00912 Transglycosylase EBA04_15825 PF01430 Hsp33 protein EBA04_15835 PF00593 TonB dependent receptor EBA04_15835 PF07715 TonB-dependent Receptor Plug Domain EBA04_15840 PF00440 Bacterial regulatory proteins, tetR family EBA04_15845 PF00561 alpha/beta hydrolase fold EBA04_15850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EBA04_15850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EBA04_15850 PF09317 Domain of unknown function (DUF1974) EBA04_15880 PF01597 Glycine cleavage H-protein EBA04_15885 PF01571 Aminomethyltransferase folate-binding domain EBA04_15885 PF08669 Glycine cleavage T-protein C-terminal barrel domain EBA04_15895 PF16200 C-terminal region of band_7 EBA04_15895 PF01145 SPFH domain / Band 7 family EBA04_15905 PF02694 Uncharacterised BCR, YnfA/UPF0060 family EBA04_15910 PF03819 MazG nucleotide pyrophosphohydrolase domain EBA04_15915 PF00459 Inositol monophosphatase family EBA04_15920 PF00293 NUDIX domain EBA04_15925 PF00202 Aminotransferase class-III EBA04_15930 PF04452 RNA methyltransferase EBA04_15935 PF02685 Glucokinase EBA04_15950 PF01476 LysM domain EBA04_15950 PF00704 Glycosyl hydrolases family 18 EBA04_15970 PF07691 PA14 domain EBA04_15970 PF14310 Fibronectin type III-like domain EBA04_15970 PF00933 Glycosyl hydrolase family 3 N terminal domain EBA04_15970 PF01915 Glycosyl hydrolase family 3 C-terminal domain EBA04_15975 PF03412 Peptidase C39 family EBA04_15975 PF00005 ABC transporter EBA04_15975 PF00664 ABC transporter transmembrane region EBA04_15985 PF05598 Transposase domain (DUF772) EBA04_15995 PF13683 Integrase core domain EBA04_15995 PF13276 HTH-like domain EBA04_16005 PF13936 Helix-turn-helix domain EBA04_16005 PF00665 Integrase core domain EBA04_16020 PF05598 Transposase domain (DUF772) EBA04_16020 PF01609 Transposase DDE domain EBA04_16040 PF03412 Peptidase C39 family EBA04_16040 PF00005 ABC transporter EBA04_16040 PF00664 ABC transporter transmembrane region EBA04_16050 PF05598 Transposase domain (DUF772) EBA04_16075 PF17678 Glycosyl hydrolase family 92 N-terminal domain EBA04_16075 PF07971 Glycosyl hydrolase family 92 EBA04_16085 PF01301 Glycosyl hydrolases family 35 EBA04_16120 PF03932 CutC family EBA04_16125 PF01112 Asparaginase EBA04_16135 PF12450 von Willebrand factor EBA04_16135 PF00092 von Willebrand factor type A domain EBA04_16135 PF12034 Domain of unknown function (DUF3520) EBA04_16145 PF13302 Acetyltransferase (GNAT) domain EBA04_16160 PF00072 Response regulator receiver domain EBA04_16160 PF01627 Hpt domain EBA04_16160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_16160 PF01584 CheW-like domain EBA04_16165 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term EBA04_16165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA04_16170 PF01584 CheW-like domain EBA04_16175 PF00072 Response regulator receiver domain EBA04_16180 PF00072 Response regulator receiver domain EBA04_16185 PF02951 Prokaryotic glutathione synthetase, N-terminal domain EBA04_16185 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain EBA04_16195 PF03747 ADP-ribosylglycohydrolase EBA04_16200 PF00814 Glycoprotease family EBA04_16205 PF13307 Helicase C-terminal domain EBA04_16205 PF04851 Type III restriction enzyme, res subunit EBA04_16215 PF00905 Penicillin binding protein transpeptidase domain EBA04_16215 PF00912 Transglycosylase EBA04_16215 PF14814 Bifunctional transglycosylase second domain EBA04_16220 PF00535 Glycosyl transferase family 2 EBA04_16230 PF13291 ACT domain EBA04_16230 PF04607 Region found in RelA / SpoT proteins EBA04_16230 PF02824 TGS domain EBA04_16235 PF08042 PqqA family EBA04_16240 PF12706 Beta-lactamase superfamily domain EBA04_16245 PF03070 TENA/THI-4/PQQC family EBA04_16250 PF05402 Coenzyme PQQ synthesis protein D (PqqD) EBA04_16255 PF13186 Iron-sulfur cluster-binding domain EBA04_16255 PF04055 Radical SAM superfamily EBA04_16280 PF11898 Domain of unknown function (DUF3418) EBA04_16280 PF00270 DEAD/DEAH box helicase EBA04_16280 PF04408 Helicase associated domain (HA2) EBA04_16280 PF00271 Helicase conserved C-terminal domain EBA04_16280 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold EBA04_16285 PF00210 Ferritin-like domain EBA04_16300 PF00570 HRDC domain EBA04_16300 PF09382 RQC domain EBA04_16300 PF00270 DEAD/DEAH box helicase EBA04_16300 PF16124 RecQ zinc-binding EBA04_16300 PF00271 Helicase conserved C-terminal domain EBA04_16315 PF01609 Transposase DDE domain EBA04_16315 PF05598 Transposase domain (DUF772) EBA04_16330 PF01479 S4 domain EBA04_16330 PF00849 RNA pseudouridylate synthase EBA04_16370 PF06508 Queuosine biosynthesis protein QueC EBA04_16380 PF04055 Radical SAM superfamily EBA04_16390 PF00691 OmpA family EBA04_16395 PF04052 TolB amino-terminal domain EBA04_16395 PF07676 WD40-like Beta Propeller Repeat EBA04_16405 PF02472 Biopolymer transport protein ExbD/TolR EBA04_16410 PF01618 MotA/TolQ/ExbB proton channel family EBA04_16415 PF03061 Thioesterase superfamily EBA04_16420 PF05491 RuvB C-terminal winged helix domain EBA04_16420 PF05496 Holliday junction DNA helicase RuvB P-loop domain EBA04_16420 PF17864 RuvB AAA lid domain EBA04_16425 PF02705 K+ potassium transporter EBA04_16430 PF07499 RuvA, C-terminal domain EBA04_16430 PF01330 RuvA N terminal domain EBA04_16435 PF02075 Crossover junction endodeoxyribonuclease RuvC EBA04_16440 PF01709 Transcriptional regulator EBA04_16455 PF00152 tRNA synthetases class II (D, K and N) EBA04_16455 PF01336 OB-fold nucleic acid binding domain EBA04_16455 PF02938 GAD domain EBA04_16470 PF07690 Major Facilitator Superfamily EBA04_16475 PF05506 Domain of unknown function (DUF756) EBA04_16475 PF04185 Phosphoesterase family EBA04_16495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA04_16495 PF03466 LysR substrate binding domain EBA04_16505 PF00005 ABC transporter EBA04_16505 PF12848 ABC transporter EBA04_16510 PF07715 TonB-dependent Receptor Plug Domain EBA04_16510 PF00593 TonB dependent receptor EBA04_16520 PF00593 TonB dependent receptor EBA04_16520 PF07715 TonB-dependent Receptor Plug Domain EBA04_16525 PF07715 TonB-dependent Receptor Plug Domain EBA04_16525 PF00593 TonB dependent receptor EBA04_16535 PF00999 Sodium/hydrogen exchanger family EBA04_16535 PF02254 TrkA-N domain EBA04_16570 PF00753 Metallo-beta-lactamase superfamily EBA04_16570 PF04273 Putative phosphatase (DUF442) EBA04_16580 PF07660 Secretin and TonB N terminus short domain EBA04_16580 PF07715 TonB-dependent Receptor Plug Domain EBA04_16580 PF00593 TonB dependent receptor EBA04_16590 PF04183 IucA / IucC family EBA04_16590 PF06276 Ferric iron reductase FhuF-like transporter EBA04_16595 PF07690 Major Facilitator Superfamily EBA04_16605 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EBA04_16605 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EBA04_16615 PF02654 Cobalamin-5-phosphate synthase EBA04_16625 PF02277 Phosphoribosyltransferase EBA04_16630 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase EBA04_16635 PF00155 Aminotransferase class I and II EBA04_16640 PF12557 Cob(I)alamin adenosyltransferase N terminal EBA04_16640 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP EBA04_16660 PF00593 TonB dependent receptor EBA04_16660 PF07715 TonB-dependent Receptor Plug Domain EBA04_16695 PF07724 AAA domain (Cdc48 subfamily) EBA04_16695 PF17871 AAA lid domain EBA04_16695 PF02861 Clp amino terminal domain, pathogenicity island component EBA04_16695 PF00004 ATPase family associated with various cellular activities (AAA) EBA04_16695 PF10431 C-terminal, D2-small domain, of ClpB protein EBA04_16700 PF01541 GIY-YIG catalytic domain EBA04_16710 PF05188 MutS domain II EBA04_16710 PF05192 MutS domain III EBA04_16710 PF05190 MutS family domain IV EBA04_16710 PF01624 MutS domain I EBA04_16710 PF00488 MutS domain V EBA04_16720 PF00141 Peroxidase EBA04_16725 PF01479 S4 domain EBA04_16730 PF01554 MatE EBA04_16740 PF01245 Ribosomal protein L19 EBA04_16745 PF01746 tRNA (Guanine-1)-methyltransferase EBA04_16750 PF05239 PRC-barrel domain EBA04_16750 PF01782 RimM N-terminal domain EBA04_16755 PF00886 Ribosomal protein S16 EBA04_16780 PF00448 SRP54-type protein, GTPase domain EBA04_16780 PF02978 Signal peptide binding domain EBA04_16780 PF02881 SRP54-type protein, helical bundle domain EBA04_16790 PF01578 Cytochrome C assembly protein EBA04_16795 PF01263 Aldose 1-epimerase EBA04_16800 PF06964 Alpha-L-arabinofuranosidase C-terminal domain EBA04_16815 PF08448 PAS fold EBA04_16815 PF00072 Response regulator receiver domain EBA04_16815 PF13188 PAS domain EBA04_16815 PF00512 His Kinase A (phospho-acceptor) domain EBA04_16815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_16820 PF17149 Periplasmic sensor domain found in signal transduction proteins EBA04_16820 PF00672 HAMP domain EBA04_16820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_16820 PF00512 His Kinase A (phospho-acceptor) domain EBA04_16820 PF01627 Hpt domain EBA04_16820 PF00072 Response regulator receiver domain EBA04_16830 PF13581 Histidine kinase-like ATPase domain EBA04_16835 PF01740 STAS domain EBA04_16840 PF08678 Rsbr N terminal EBA04_16840 PF01740 STAS domain EBA04_16850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_16850 PF00183 Hsp90 protein EBA04_16855 PF12833 Helix-turn-helix domain EBA04_16875 PF18073 Rubredoxin metal binding domain EBA04_16910 PF05593 RHS Repeat EBA04_16910 PF03527 RHS protein EBA04_16910 PF14220 Domain of unknown function (DUF4329) EBA04_16920 PF05593 RHS Repeat EBA04_16920 PF03527 RHS protein EBA04_16920 PF14220 Domain of unknown function (DUF4329) EBA04_16930 PF04717 Type VI secretion system, phage-baseplate injector EBA04_16940 PF03626 Prokaryotic Cytochrome C oxidase subunit IV EBA04_16945 PF00510 Cytochrome c oxidase subunit III EBA04_16950 PF00115 Cytochrome C and Quinol oxidase polypeptide I EBA04_16955 PF06481 COX Aromatic Rich Motif EBA04_16955 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EBA04_16965 PF02401 LytB protein EBA04_16970 PF01252 Signal peptidase (SPase) II EBA04_16975 PF08264 Anticodon-binding domain of tRNA EBA04_16975 PF00133 tRNA synthetases class I (I, L, M and V) EBA04_16975 PF06827 Zinc finger found in FPG and IleRS EBA04_16985 PF03023 Lipid II flippase MurJ EBA04_16990 PF01649 Ribosomal protein S20 EBA04_16995 PF01018 GTP1/OBG EBA04_16995 PF01926 50S ribosome-binding GTPase EBA04_17000 PF01016 Ribosomal L27 protein EBA04_17005 PF00829 Ribosomal prokaryotic L21 protein EBA04_17010 PF00005 ABC transporter EBA04_17010 PF17755 UvrA DNA-binding domain EBA04_17010 PF17760 UvrA interaction domain EBA04_17025 PF00378 Enoyl-CoA hydratase/isomerase EBA04_17040 PF08281 Sigma-70, region 4 EBA04_17040 PF04542 Sigma-70 region 2 EBA04_17055 PF04376 Arginine-tRNA-protein transferase, N terminus EBA04_17055 PF04377 Arginine-tRNA-protein transferase, C terminus EBA04_17085 PF07715 TonB-dependent Receptor Plug Domain EBA04_17085 PF00593 TonB dependent receptor EBA04_17095 PF02358 Trehalose-phosphatase EBA04_17100 PF00723 Glycosyl hydrolases family 15 EBA04_17105 PF00982 Glycosyltransferase family 20 EBA04_17110 PF01011 PQQ enzyme repeat EBA04_17135 PF00849 RNA pseudouridylate synthase EBA04_17140 PF13525 Outer membrane lipoprotein EBA04_17145 PF02540 NAD synthase EBA04_17145 PF00795 Carbon-nitrogen hydrolase EBA04_17160 PF02629 CoA binding domain EBA04_17160 PF00549 CoA-ligase EBA04_17165 PF00549 CoA-ligase EBA04_17165 PF08442 ATP-grasp domain EBA04_17170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_17170 PF00512 His Kinase A (phospho-acceptor) domain EBA04_17175 PF02954 Bacterial regulatory protein, Fis family EBA04_17175 PF00158 Sigma-54 interaction domain EBA04_17175 PF00072 Response regulator receiver domain EBA04_17185 PF02661 Fic/DOC family EBA04_17190 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EBA04_17190 PF00437 Type II/IV secretion system protein EBA04_17205 PF00884 Sulfatase EBA04_17205 PF08019 Phosphoethanolamine transferase EptA/EptB EBA04_17210 PF07963 Prokaryotic N-terminal methylation motif EBA04_17210 PF00114 Pilin (bacterial filament) EBA04_17215 PF00482 Type II secretion system (T2SS), protein F EBA04_17220 PF01478 Type IV leader peptidase family EBA04_17220 PF06750 Bacterial Peptidase A24 N-terminal domain EBA04_17225 PF01121 Dephospho-CoA kinase EBA04_17230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_17230 PF00672 HAMP domain EBA04_17230 PF00512 His Kinase A (phospho-acceptor) domain EBA04_17235 PF00072 Response regulator receiver domain EBA04_17235 PF00486 Transcriptional regulatory protein, C terminal EBA04_17245 PF08443 RimK-like ATP-grasp domain EBA04_17245 PF18030 RimK PreATP-grasp domain EBA04_17250 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EBA04_17250 PF00128 Alpha amylase, catalytic domain EBA04_17255 PF01609 Transposase DDE domain EBA04_17255 PF05598 Transposase domain (DUF772) EBA04_17270 PF05598 Transposase domain (DUF772) EBA04_17270 PF01609 Transposase DDE domain EBA04_17275 PF05598 Transposase domain (DUF772) EBA04_17285 PF13683 Integrase core domain EBA04_17285 PF13276 HTH-like domain EBA04_17295 PF01609 Transposase DDE domain EBA04_17295 PF05598 Transposase domain (DUF772) EBA04_17320 PF05690 Thiazole biosynthesis protein ThiG EBA04_17330 PF02390 Putative methyltransferase EBA04_17335 PF03600 Citrate transporter EBA04_17335 PF02080 TrkA-C domain EBA04_17360 PF01557 Fumarylacetoacetate (FAA) hydrolase family EBA04_17365 PF01741 Large-conductance mechanosensitive channel, MscL EBA04_17400 PF00588 SpoU rRNA Methylase family EBA04_17400 PF08032 RNA 2'-O ribose methyltransferase substrate binding EBA04_17410 PF11838 ERAP1-like C-terminal domain EBA04_17410 PF01433 Peptidase family M1 domain EBA04_17415 PF00873 AcrB/AcrD/AcrF family EBA04_17420 PF00529 HlyD membrane-fusion protein of T1SS EBA04_17420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EBA04_17425 PF00009 Elongation factor Tu GTP binding domain EBA04_17430 PF01507 Phosphoadenosine phosphosulfate reductase family EBA04_17435 PF00667 FAD binding domain EBA04_17435 PF00175 Oxidoreductase NAD-binding domain EBA04_17435 PF00258 Flavodoxin EBA04_17440 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EBA04_17440 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EBA04_17445 PF01507 Phosphoadenosine phosphosulfate reductase family EBA04_17465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_17465 PF00512 His Kinase A (phospho-acceptor) domain EBA04_17465 PF01627 Hpt domain EBA04_17465 PF00072 Response regulator receiver domain EBA04_17465 PF00672 HAMP domain EBA04_17485 PF03466 LysR substrate binding domain EBA04_17485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA04_17490 PF10414 Sirohaem synthase dimerisation region EBA04_17490 PF14824 Sirohaem biosynthesis protein central EBA04_17490 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EBA04_17495 PF00291 Pyridoxal-phosphate dependent enzyme EBA04_17505 PF01661 Macro domain EBA04_17510 PF00274 Fructose-bisphosphate aldolase class-I EBA04_17520 PF00224 Pyruvate kinase, barrel domain EBA04_17520 PF02887 Pyruvate kinase, alpha/beta domain EBA04_17530 PF00162 Phosphoglycerate kinase EBA04_17545 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EBA04_17545 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EBA04_17560 PF00753 Metallo-beta-lactamase superfamily EBA04_17560 PF04273 Putative phosphatase (DUF442) EBA04_17570 PF00528 Binding-protein-dependent transport system inner membrane component EBA04_17575 PF00005 ABC transporter EBA04_17575 PF03459 TOBE domain EBA04_17595 PF08521 Two-component sensor kinase N-terminal EBA04_17595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_17595 PF00512 His Kinase A (phospho-acceptor) domain EBA04_17600 PF00486 Transcriptional regulatory protein, C terminal EBA04_17600 PF00072 Response regulator receiver domain EBA04_17620 PF00501 AMP-binding enzyme EBA04_17645 PF01476 LysM domain EBA04_17645 PF03734 L,D-transpeptidase catalytic domain EBA04_17650 PF01551 Peptidase family M23 EBA04_17650 PF04225 Opacity-associated protein A LysM-like domain EBA04_17665 PF00456 Transketolase, thiamine diphosphate binding domain EBA04_17665 PF02780 Transketolase, C-terminal domain EBA04_17665 PF02779 Transketolase, pyrimidine binding domain EBA04_17670 PF00375 Sodium:dicarboxylate symporter family EBA04_17690 PF00092 von Willebrand factor type A domain EBA04_17690 PF07584 Aerotolerance regulator N-terminal EBA04_17710 PF17863 AAA lid domain EBA04_17710 PF07726 ATPase family associated with various cellular activities (AAA) EBA04_17720 PF11741 AMIN domain EBA04_17720 PF03958 Bacterial type II/III secretion system short domain EBA04_17720 PF07660 Secretin and TonB N terminus short domain EBA04_17720 PF00263 Bacterial type II and III secretion system protein EBA04_17745 PF17092 Penicillin-binding protein OB-like domain EBA04_17745 PF00905 Penicillin binding protein transpeptidase domain EBA04_17745 PF00912 Transglycosylase EBA04_17750 PF05598 Transposase domain (DUF772) EBA04_17765 PF00285 Citrate synthase, C-terminal domain EBA04_17770 PF01197 Ribosomal protein L31 EBA04_17775 PF01156 Inosine-uridine preferring nucleoside hydrolase EBA04_17780 PF00271 Helicase conserved C-terminal domain EBA04_17780 PF17191 RecG wedge domain EBA04_17780 PF00270 DEAD/DEAH box helicase EBA04_17785 PF01042 Endoribonuclease L-PSP EBA04_17790 PF04607 Region found in RelA / SpoT proteins EBA04_17790 PF02824 TGS domain EBA04_17790 PF13291 ACT domain EBA04_17795 PF01192 RNA polymerase Rpb6 EBA04_17805 PF00625 Guanylate kinase EBA04_17810 PF03755 YicC-like family, N-terminal region EBA04_17810 PF08340 Domain of unknown function (DUF1732) EBA04_17815 PF01138 3' exoribonuclease family, domain 1 EBA04_17815 PF03725 3' exoribonuclease family, domain 2 EBA04_17825 PF01725 Ham1 family EBA04_17830 PF06969 HemN C-terminal domain EBA04_17830 PF04055 Radical SAM superfamily EBA04_17845 PF00557 Metallopeptidase family M24 EBA04_17860 PF05195 Aminopeptidase P, N-terminal domain EBA04_17860 PF00557 Metallopeptidase family M24 EBA04_17865 PF03695 Uncharacterised protein family (UPF0149) EBA04_17875 PF05164 Cell division protein ZapA EBA04_17895 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EBA04_17905 PF13369 Transglutaminase-like superfamily EBA04_17910 PF00301 Rubredoxin EBA04_17915 PF02581 Thiamine monophosphate synthase EBA04_17925 PF00202 Aminotransferase class-III EBA04_17935 PF00196 Bacterial regulatory proteins, luxR family EBA04_17935 PF17874 MalT-like TPR region EBA04_17940 PF00127 Copper binding proteins, plastocyanin/azurin family EBA04_17980 PF00202 Aminotransferase class-III EBA04_18005 PF01569 PAP2 superfamily EBA04_18020 PF01062 Bestrophin, RFP-TM, chloride channel EBA04_18030 PF02875 Mur ligase family, glutamate ligase domain EBA04_18030 PF01225 Mur ligase family, catalytic domain EBA04_18030 PF08245 Mur ligase middle domain EBA04_18040 PF00365 Phosphofructokinase EBA04_18045 PF01609 Transposase DDE domain EBA04_18045 PF05598 Transposase domain (DUF772) EBA04_18060 PF03030 Inorganic H+ pyrophosphatase EBA04_18070 PF00719 Inorganic pyrophosphatase EBA04_18085 PF07715 TonB-dependent Receptor Plug Domain EBA04_18085 PF00593 TonB dependent receptor EBA04_18090 PF12833 Helix-turn-helix domain EBA04_18095 PF18500 CadC C-terminal domain 1 EBA04_18095 PF00486 Transcriptional regulatory protein, C terminal EBA04_18100 PF01964 Radical SAM ThiC family EBA04_18100 PF13667 ThiC-associated domain EBA04_18110 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain EBA04_18110 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain EBA04_18115 PF00205 Thiamine pyrophosphate enzyme, central domain EBA04_18115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EBA04_18115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EBA04_18125 PF00291 Pyridoxal-phosphate dependent enzyme EBA04_18130 PF00682 HMGL-like EBA04_18130 PF08502 LeuA allosteric (dimerisation) domain EBA04_18135 PF00180 Isocitrate/isopropylmalate dehydrogenase EBA04_18140 PF08241 Methyltransferase domain EBA04_18145 PF00694 Aconitase C-terminal domain EBA04_18150 PF00330 Aconitase family (aconitate hydratase) EBA04_18155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA04_18175 PF02321 Outer membrane efflux protein EBA04_18180 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) EBA04_18185 PF03279 Bacterial lipid A biosynthesis acyltransferase EBA04_18205 PF05598 Transposase domain (DUF772) EBA04_18205 PF01609 Transposase DDE domain EBA04_18215 PF13936 Helix-turn-helix domain EBA04_18215 PF00665 Integrase core domain EBA04_18220 PF00664 ABC transporter transmembrane region EBA04_18220 PF00005 ABC transporter EBA04_18220 PF03412 Peptidase C39 family EBA04_18255 PF05598 Transposase domain (DUF772) EBA04_18280 PF05598 Transposase domain (DUF772) EBA04_18280 PF01609 Transposase DDE domain EBA04_18295 PF01515 Phosphate acetyl/butaryl transferase EBA04_18295 PF03949 Malic enzyme, NAD binding domain EBA04_18295 PF00390 Malic enzyme, N-terminal domain EBA04_18300 PF00375 Sodium:dicarboxylate symporter family EBA04_18315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_18315 PF00512 His Kinase A (phospho-acceptor) domain EBA04_18320 PF07690 Major Facilitator Superfamily EBA04_18330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA04_18330 PF03466 LysR substrate binding domain EBA04_18350 PF00072 Response regulator receiver domain EBA04_18350 PF00196 Bacterial regulatory proteins, luxR family EBA04_18360 PF00512 His Kinase A (phospho-acceptor) domain EBA04_18360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_18360 PF08521 Two-component sensor kinase N-terminal EBA04_18365 PF00072 Response regulator receiver domain EBA04_18365 PF00486 Transcriptional regulatory protein, C terminal EBA04_18380 PF03600 Citrate transporter EBA04_18385 PF00106 short chain dehydrogenase EBA04_18395 PF00356 Bacterial regulatory proteins, lacI family EBA04_18400 PF05598 Transposase domain (DUF772) EBA04_18415 PF00128 Alpha amylase, catalytic domain EBA04_18430 PF03193 RsgA GTPase EBA04_18435 PF00155 Aminotransferase class I and II EBA04_18455 PF01522 Polysaccharide deacetylase EBA04_18460 PF00462 Glutaredoxin EBA04_18480 PF01979 Amidohydrolase family EBA04_18530 PF01327 Polypeptide deformylase EBA04_18535 PF01609 Transposase DDE domain EBA04_18535 PF05598 Transposase domain (DUF772) EBA04_18540 PF03960 ArsC family EBA04_18570 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family EBA04_18570 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain EBA04_18615 PF07715 TonB-dependent Receptor Plug Domain EBA04_18615 PF00593 TonB dependent receptor EBA04_18630 PF07702 UTRA domain EBA04_18630 PF00392 Bacterial regulatory proteins, gntR family EBA04_18645 PF03958 Bacterial type II/III secretion system short domain EBA04_18645 PF00263 Bacterial type II and III secretion system protein EBA04_18655 PF10741 Type II secretion system (T2SS), protein M subtype b EBA04_18660 PF05137 Fimbrial assembly protein (PilN) EBA04_18665 PF03934 Type II secretion system (T2SS), protein K EBA04_18675 PF07963 Prokaryotic N-terminal methylation motif EBA04_18680 PF12019 Type II transport protein GspH EBA04_18685 PF08334 Type II secretion system (T2SS), protein G EBA04_18690 PF00482 Type II secretion system (T2SS), protein F EBA04_18700 PF00437 Type II/IV secretion system protein EBA04_18700 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EBA04_18705 PF00082 Subtilase family EBA04_18705 PF04151 Bacterial pre-peptidase C-terminal domain EBA04_18710 PF03895 YadA-like membrane anchor domain EBA04_18710 PF13018 Extended Signal Peptide of Type V secretion system EBA04_18710 PF05662 Coiled stalk of trimeric autotransporter adhesin EBA04_18710 PF05658 Head domain of trimeric autotransporter adhesin EBA04_18720 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal EBA04_18720 PF02769 AIR synthase related protein, C-terminal domain EBA04_18720 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain EBA04_18730 PF13098 Thioredoxin-like domain EBA04_18730 PF10411 Disulfide bond isomerase protein N-terminus EBA04_18735 PF02899 Phage integrase, N-terminal SAM-like domain EBA04_18735 PF00589 Phage integrase family EBA04_18750 PF03739 Lipopolysaccharide export system permease LptF/LptG EBA04_18760 PF00883 Cytosol aminopeptidase family, catalytic domain EBA04_18760 PF02789 Cytosol aminopeptidase family, N-terminal domain EBA04_18785 PF08264 Anticodon-binding domain of tRNA EBA04_18785 PF00133 tRNA synthetases class I (I, L, M and V) EBA04_18785 PF10458 Valyl tRNA synthetase tRNA binding arm EBA04_18795 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain EBA04_18795 PF01464 Transglycosylase SLT domain EBA04_18805 PF05598 Transposase domain (DUF772) EBA04_18815 PF13936 Helix-turn-helix domain EBA04_18815 PF00665 Integrase core domain EBA04_18825 PF13936 Helix-turn-helix domain EBA04_18825 PF00665 Integrase core domain EBA04_18850 PF01066 CDP-alcohol phosphatidyltransferase EBA04_18860 PF03129 Anticodon binding domain EBA04_18860 PF04073 Aminoacyl-tRNA editing domain EBA04_18860 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EBA04_18865 PF00816 H-NS histone family EBA04_18875 PF02405 Permease MlaE EBA04_18880 PF00005 ABC transporter EBA04_18885 PF03886 ABC-type transport auxiliary lipoprotein component EBA04_18885 PF02470 MlaD protein EBA04_18915 PF14307 Glycosyltransferase WbsX EBA04_18915 PF05045 Rhamnan synthesis protein F EBA04_18920 PF01144 Coenzyme A transferase EBA04_18925 PF01144 Coenzyme A transferase EBA04_18930 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EBA04_18930 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EBA04_18930 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EBA04_18930 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EBA04_18935 PF00483 Nucleotidyl transferase EBA04_18935 PF01050 Mannose-6-phosphate isomerase EBA04_18940 PF04321 RmlD substrate binding domain EBA04_18945 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase EBA04_18950 PF00483 Nucleotidyl transferase EBA04_18955 PF16363 GDP-mannose 4,6 dehydratase EBA04_18965 PF01012 Electron transfer flavoprotein domain EBA04_18970 PF01012 Electron transfer flavoprotein domain EBA04_18970 PF00766 Electron transfer flavoprotein FAD-binding domain EBA04_18980 PF00005 ABC transporter EBA04_18990 PF05598 Transposase domain (DUF772) EBA04_19025 PF01370 NAD dependent epimerase/dehydratase family EBA04_19035 PF01053 Cys/Met metabolism PLP-dependent enzyme EBA04_19040 PF00571 CBS domain EBA04_19040 PF00291 Pyridoxal-phosphate dependent enzyme EBA04_19060 PF00437 Type II/IV secretion system protein EBA04_19065 PF02798 Glutathione S-transferase, N-terminal domain EBA04_19065 PF14497 Glutathione S-transferase, C-terminal domain EBA04_19080 PF00271 Helicase conserved C-terminal domain EBA04_19080 PF00270 DEAD/DEAH box helicase EBA04_19090 PF01242 6-pyruvoyl tetrahydropterin synthase EBA04_19105 PF13185 GAF domain EBA04_19115 PF13419 Haloacid dehalogenase-like hydrolase EBA04_19120 PF00817 impB/mucB/samB family EBA04_19120 PF11799 impB/mucB/samB family C-terminal domain EBA04_19130 PF07977 FabA-like domain EBA04_19135 PF00109 Beta-ketoacyl synthase, N-terminal domain EBA04_19135 PF02801 Beta-ketoacyl synthase, C-terminal domain EBA04_19145 PF01432 Peptidase family M3 EBA04_19160 PF00394 Multicopper oxidase EBA04_19160 PF07731 Multicopper oxidase EBA04_19160 PF07732 Multicopper oxidase EBA04_19165 PF05275 Copper resistance protein B precursor (CopB) EBA04_19170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EBA04_19195 PF01380 SIS domain EBA04_19240 PF14602 Hexapeptide repeat of succinyl-transferase EBA04_19240 PF12804 MobA-like NTP transferase domain EBA04_19240 PF00132 Bacterial transferase hexapeptide (six repeats) EBA04_19255 PF01817 Chorismate mutase type II EBA04_19260 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain EBA04_19265 PF02874 ATP synthase alpha/beta family, beta-barrel domain EBA04_19265 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EBA04_19270 PF00231 ATP synthase EBA04_19275 PF02874 ATP synthase alpha/beta family, beta-barrel domain EBA04_19275 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EBA04_19275 PF00306 ATP synthase alpha/beta chain, C terminal domain EBA04_19280 PF00213 ATP synthase delta (OSCP) subunit EBA04_19285 PF00430 ATP synthase B/B' CF(0) EBA04_19290 PF00137 ATP synthase subunit C EBA04_19295 PF00119 ATP synthase A chain EBA04_19315 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EBA04_19315 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA04_19325 PF02817 e3 binding domain EBA04_19325 PF00364 Biotin-requiring enzyme EBA04_19325 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EBA04_19355 PF03180 NLPA lipoprotein EBA04_19360 PF00528 Binding-protein-dependent transport system inner membrane component EBA04_19365 PF09383 NIL domain EBA04_19365 PF00005 ABC transporter EBA04_19370 PF00892 EamA-like transporter family EBA04_19375 PF04461 Protein of unknown function (DUF520) EBA04_19405 PF13419 Haloacid dehalogenase-like hydrolase EBA04_19410 PF01479 S4 domain EBA04_19410 PF00849 RNA pseudouridylate synthase EBA04_19415 PF08468 Methyltransferase small domain N-terminal EBA04_19415 PF05175 Methyltransferase small domain EBA04_19430 PF07995 Glucose / Sorbosone dehydrogenase EBA04_19445 PF00512 His Kinase A (phospho-acceptor) domain EBA04_19445 PF00989 PAS fold EBA04_19445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_19465 PF01168 Alanine racemase, N-terminal domain EBA04_19465 PF00842 Alanine racemase, C-terminal domain EBA04_19470 PF01266 FAD dependent oxidoreductase EBA04_19475 PF01037 Lrp/AsnC ligand binding domain EBA04_19485 PF01641 SelR domain EBA04_19495 PF01618 MotA/TolQ/ExbB proton channel family EBA04_19500 PF00691 OmpA family EBA04_19500 PF13677 Membrane MotB of proton-channel complex MotA/MotB EBA04_19520 PF00486 Transcriptional regulatory protein, C terminal EBA04_19520 PF00072 Response regulator receiver domain EBA04_19525 PF13188 PAS domain EBA04_19525 PF00072 Response regulator receiver domain EBA04_19525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_19525 PF08448 PAS fold EBA04_19525 PF00512 His Kinase A (phospho-acceptor) domain EBA04_19535 PF04151 Bacterial pre-peptidase C-terminal domain EBA04_19535 PF00082 Subtilase family EBA04_19550 PF01061 ABC-2 type transporter EBA04_19555 PF00005 ABC transporter EBA04_19560 PF00999 Sodium/hydrogen exchanger family EBA04_19570 PF02469 Fasciclin domain EBA04_19580 PF03167 Uracil DNA glycosylase superfamily EBA04_19590 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase EBA04_19600 PF03358 NADPH-dependent FMN reductase EBA04_19620 PF01431 Peptidase family M13 EBA04_19620 PF05649 Peptidase family M13 EBA04_19640 PF13520 Amino acid permease EBA04_19650 PF00072 Response regulator receiver domain EBA04_19650 PF04397 LytTr DNA-binding domain EBA04_19665 PF05974 Domain of unknown function (DUF892) EBA04_19670 PF05067 Manganese containing catalase EBA04_19685 PF01739 CheR methyltransferase, SAM binding domain EBA04_19685 PF08448 PAS fold EBA04_19685 PF03705 CheR methyltransferase, all-alpha domain EBA04_19685 PF01339 CheB methylesterase EBA04_19695 PF01609 Transposase DDE domain EBA04_19695 PF05598 Transposase domain (DUF772) EBA04_19710 PF00158 Sigma-54 interaction domain EBA04_19710 PF00072 Response regulator receiver domain EBA04_19710 PF02954 Bacterial regulatory protein, Fis family EBA04_19725 PF01654 Cytochrome bd terminal oxidase subunit I EBA04_19730 PF02322 Cytochrome bd terminal oxidase subunit II EBA04_19765 PF00107 Zinc-binding dehydrogenase EBA04_19765 PF08240 Alcohol dehydrogenase GroES-like domain EBA04_19765 PF13823 Alcohol dehydrogenase GroES-associated EBA04_19805 PF07715 TonB-dependent Receptor Plug Domain EBA04_19805 PF00593 TonB dependent receptor EBA04_19820 PF00005 ABC transporter EBA04_19840 PF03971 Monomeric isocitrate dehydrogenase EBA04_19860 PF14489 QueF-like protein EBA04_19860 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term EBA04_19870 PF07687 Peptidase dimerisation domain EBA04_19870 PF01546 Peptidase family M20/M25/M40 EBA04_19875 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EBA04_19880 PF00873 AcrB/AcrD/AcrF family EBA04_19885 PF00873 AcrB/AcrD/AcrF family EBA04_19905 PF07063 Domain of unknown function (DUF1338) EBA04_19955 PF01510 N-acetylmuramoyl-L-alanine amidase EBA04_19965 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EBA04_19965 PF13378 Enolase C-terminal domain-like EBA04_19990 PF13520 Amino acid permease EBA04_20010 PF05360 yiaA/B two helix domain EBA04_20015 PF07995 Glucose / Sorbosone dehydrogenase EBA04_20030 PF14310 Fibronectin type III-like domain EBA04_20030 PF00933 Glycosyl hydrolase family 3 N terminal domain EBA04_20030 PF01915 Glycosyl hydrolase family 3 C-terminal domain EBA04_20035 PF02152 Dihydroneopterin aldolase EBA04_20040 PF00814 Glycoprotease family EBA04_20045 PF01165 Ribosomal protein S21 EBA04_20050 PF09424 Yqey-like protein EBA04_20070 PF03631 Virulence factor BrkB EBA04_20075 PF08278 DNA primase DnaG DnaB-binding EBA04_20075 PF10410 DnaB-helicase binding domain of primase EBA04_20075 PF01807 CHC2 zinc finger EBA04_20075 PF08275 DNA primase catalytic core, N-terminal domain EBA04_20085 PF13593 SBF-like CPA transporter family (DUF4137) EBA04_20105 PF01040 UbiA prenyltransferase family EBA04_20130 PF00510 Cytochrome c oxidase subunit III EBA04_20135 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 EBA04_20145 PF00115 Cytochrome C and Quinol oxidase polypeptide I EBA04_20150 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EBA04_20150 PF02790 Cytochrome C oxidase subunit II, transmembrane domain EBA04_20160 PF18327 Proline utilization A proline dehydrogenase N-terminal domain EBA04_20160 PF14850 DNA-binding domain of Proline dehydrogenase EBA04_20160 PF01619 Proline dehydrogenase EBA04_20160 PF00171 Aldehyde dehydrogenase family EBA04_20170 PF05598 Transposase domain (DUF772) EBA04_20210 PF00579 tRNA synthetases class I (W and Y) EBA04_20215 PF04225 Opacity-associated protein A LysM-like domain EBA04_20215 PF01551 Peptidase family M23 EBA04_20220 PF03702 Anhydro-N-acetylmuramic acid kinase EBA04_20230 PF07690 Major Facilitator Superfamily EBA04_20235 PF03372 Endonuclease/Exonuclease/phosphatase family EBA04_20240 PF00156 Phosphoribosyl transferase domain EBA04_20250 PF13614 AAA domain EBA04_20255 PF02195 ParB-like nuclease domain EBA04_20255 PF17762 HTH domain found in ParB protein EBA04_20265 PF01370 NAD dependent epimerase/dehydratase family EBA04_20270 PF00535 Glycosyl transferase family 2 EBA04_20285 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EBA04_20285 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EBA04_20285 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EBA04_20285 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EBA04_20290 PF00692 dUTPase EBA04_20295 PF02441 Flavoprotein EBA04_20295 PF04127 DNA / pantothenate metabolism flavoprotein EBA04_20300 PF04002 RadC-like JAB domain EBA04_20305 PF00750 tRNA synthetases class I (R) EBA04_20305 PF03485 Arginyl tRNA synthetase N terminal domain EBA04_20305 PF05746 DALR anticodon binding domain EBA04_20320 PF00106 short chain dehydrogenase EBA04_20330 PF03377 TAL effector repeat EBA04_20360 PF17810 Arginine decarboxylase helical bundle domain EBA04_20360 PF17944 Arginine decarboxylase C-terminal helical extension EBA04_20360 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EBA04_20365 PF17284 Spermidine synthase tetramerisation domain EBA04_20400 PF00543 Nitrogen regulatory protein P-II EBA04_20405 PF04380 Membrane fusogenic activity EBA04_20410 PF13335 Magnesium chelatase, subunit ChlI C-terminal EBA04_20410 PF01078 Magnesium chelatase, subunit ChlI EBA04_20435 PF00563 EAL domain EBA04_20435 PF12792 CSS motif domain associated with EAL EBA04_20440 PF00487 Fatty acid desaturase EBA04_20445 PF00970 Oxidoreductase FAD-binding domain EBA04_20445 PF00111 2Fe-2S iron-sulfur cluster binding domain EBA04_20445 PF00175 Oxidoreductase NAD-binding domain EBA04_20450 PF00440 Bacterial regulatory proteins, tetR family EBA04_20455 PF01609 Transposase DDE domain EBA04_20455 PF05598 Transposase domain (DUF772) EBA04_20515 PF01370 NAD dependent epimerase/dehydratase family EBA04_20515 PF08338 Domain of unknown function (DUF1731) EBA04_20525 PF00512 His Kinase A (phospho-acceptor) domain EBA04_20525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_20525 PF08521 Two-component sensor kinase N-terminal EBA04_20540 PF00595 PDZ domain EBA04_20565 PF01594 AI-2E family transporter EBA04_20575 PF02789 Cytosol aminopeptidase family, N-terminal domain EBA04_20575 PF00883 Cytosol aminopeptidase family, catalytic domain EBA04_20585 PF04542 Sigma-70 region 2 EBA04_20585 PF08281 Sigma-70, region 4 EBA04_20590 PF00199 Catalase EBA04_20610 PF00892 EamA-like transporter family EBA04_20615 PF00892 EamA-like transporter family EBA04_20640 PF00753 Metallo-beta-lactamase superfamily EBA04_20645 PF00579 tRNA synthetases class I (W and Y) EBA04_20650 PF05532 CsbD-like EBA04_20665 PF00491 Arginase family EBA04_20685 PF02223 Thymidylate kinase EBA04_20700 PF03309 Type III pantothenate kinase EBA04_20705 PF08279 HTH domain EBA04_20705 PF02237 Biotin protein ligase C terminal domain EBA04_20705 PF03099 Biotin/lipoate A/B protein ligase family EBA04_20715 PF06167 Glucose-regulated metallo-peptidase M90 EBA04_20730 PF00512 His Kinase A (phospho-acceptor) domain EBA04_20730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_20730 PF00672 HAMP domain EBA04_20735 PF00072 Response regulator receiver domain EBA04_20735 PF00486 Transcriptional regulatory protein, C terminal EBA04_20745 PF01207 Dihydrouridine synthase (Dus) EBA04_20760 PF03377 TAL effector repeat EBA04_20795 PF00199 Catalase EBA04_20795 PF06628 Catalase-related immune-responsive EBA04_20800 PF05598 Transposase domain (DUF772) EBA04_20800 PF01609 Transposase DDE domain EBA04_20805 PF13533 Biotin-lipoyl like EBA04_20820 PF13307 Helicase C-terminal domain EBA04_20820 PF06733 DEAD_2 EBA04_20835 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EBA04_20835 PF01488 Shikimate / quinate 5-dehydrogenase EBA04_20835 PF08501 Shikimate dehydrogenase substrate binding domain EBA04_20855 PF00258 Flavodoxin EBA04_20855 PF00175 Oxidoreductase NAD-binding domain EBA04_20855 PF00667 FAD binding domain EBA04_20865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA04_20865 PF03466 LysR substrate binding domain EBA04_20880 PF00490 Delta-aminolevulinic acid dehydratase EBA04_20905 PF00326 Prolyl oligopeptidase family EBA04_20905 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region EBA04_20915 PF02798 Glutathione S-transferase, N-terminal domain EBA04_20915 PF00043 Glutathione S-transferase, C-terminal domain EBA04_20925 PF13936 Helix-turn-helix domain EBA04_20925 PF00665 Integrase core domain EBA04_20955 PF00005 ABC transporter EBA04_20965 PF01381 Helix-turn-helix EBA04_20980 PF02583 Metal-sensitive transcriptional repressor EBA04_20985 PF01545 Cation efflux family EBA04_20990 PF01383 CpcD/allophycocyanin linker domain EBA04_20990 PF00175 Oxidoreductase NAD-binding domain EBA04_20995 PF00005 ABC transporter EBA04_21000 PF01061 ABC-2 type transporter EBA04_21010 PF08546 Ketopantoate reductase PanE/ApbA C terminal EBA04_21010 PF02558 Ketopantoate reductase PanE/ApbA EBA04_21045 PF13406 Transglycosylase SLT domain EBA04_21060 PF02463 RecF/RecN/SMC N terminal domain EBA04_21060 PF06470 SMC proteins Flexible Hinge Domain EBA04_21065 PF00268 Ribonucleotide reductase, small chain EBA04_21075 PF00317 Ribonucleotide reductase, all-alpha domain EBA04_21075 PF02867 Ribonucleotide reductase, barrel domain EBA04_21075 PF03477 ATP cone domain EBA04_21090 PF13607 Succinyl-CoA ligase like flavodoxin domain EBA04_21090 PF00583 Acetyltransferase (GNAT) family EBA04_21090 PF13380 CoA binding domain EBA04_21100 PF00571 CBS domain EBA04_21100 PF01769 Divalent cation transporter EBA04_21100 PF03448 MgtE intracellular N domain EBA04_21110 PF02254 TrkA-N domain EBA04_21110 PF00999 Sodium/hydrogen exchanger family EBA04_21125 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EBA04_21125 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EBA04_21130 PF00723 Glycosyl hydrolases family 15 EBA04_21145 PF05166 YcgL domain EBA04_21150 PF02801 Beta-ketoacyl synthase, C-terminal domain EBA04_21150 PF00109 Beta-ketoacyl synthase, N-terminal domain EBA04_21160 PF00535 Glycosyl transferase family 2 EBA04_21200 PF07977 FabA-like domain EBA04_21205 PF01553 Acyltransferase EBA04_21215 PF00550 Phosphopantetheine attachment site EBA04_21220 PF04820 Tryptophan halogenase EBA04_21260 PF01218 Coproporphyrinogen III oxidase EBA04_21275 PF01612 3'-5' exonuclease EBA04_21275 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EBA04_21275 PF01367 5'-3' exonuclease, C-terminal SAM fold EBA04_21275 PF00476 DNA polymerase family A EBA04_21325 PF12464 Maltose acetyltransferase EBA04_21325 PF14602 Hexapeptide repeat of succinyl-transferase EBA04_21335 PF00580 UvrD/REP helicase N-terminal domain EBA04_21335 PF13361 UvrD-like helicase C-terminal domain EBA04_21355 PF13396 Phospholipase_D-nuclease N-terminal EBA04_21355 PF13091 PLD-like domain EBA04_21360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA04_21365 PF05598 Transposase domain (DUF772) EBA04_21370 PF03737 Aldolase/RraA EBA04_21385 PF04909 Amidohydrolase EBA04_21390 PF00471 Ribosomal protein L33 EBA04_21395 PF00830 Ribosomal L28 family EBA04_21415 PF02527 rRNA small subunit methyltransferase G EBA04_21420 PF09423 PhoD-like phosphatase EBA04_21420 PF16655 PhoD-like phosphatase, N-terminal domain EBA04_21425 PF16655 PhoD-like phosphatase, N-terminal domain EBA04_21425 PF09423 PhoD-like phosphatase EBA04_21430 PF01648 4'-phosphopantetheinyl transferase superfamily EBA04_21435 PF04226 Transglycosylase associated protein EBA04_21445 PF03372 Endonuclease/Exonuclease/phosphatase family EBA04_21460 PF00474 Sodium:solute symporter family EBA04_21465 PF04341 Protein of unknown function, DUF485 EBA04_21475 PF13193 AMP-binding enzyme C-terminal domain EBA04_21475 PF00501 AMP-binding enzyme EBA04_21475 PF16177 Acetyl-coenzyme A synthetase N-terminus EBA04_21480 PF00196 Bacterial regulatory proteins, luxR family EBA04_21480 PF00072 Response regulator receiver domain EBA04_21510 PF00248 Aldo/keto reductase family EBA04_21525 PF01557 Fumarylacetoacetate (FAA) hydrolase family EBA04_21535 PF13378 Enolase C-terminal domain-like EBA04_21535 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EBA04_21540 PF05336 L-rhamnose mutarotase EBA04_21545 PF07690 Major Facilitator Superfamily EBA04_21550 PF01614 Bacterial transcriptional regulator EBA04_21550 PF09339 IclR helix-turn-helix domain EBA04_21555 PF02659 Putative manganese efflux pump EBA04_21560 PF00512 His Kinase A (phospho-acceptor) domain EBA04_21560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA04_21570 PF06165 Glycosyltransferase family 36 EBA04_21570 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain EBA04_21585 PF13570 PQQ-like domain EBA04_21585 PF01011 PQQ enzyme repeat EBA04_21585 PF13360 PQQ-like domain EBA04_21615 PF05598 Transposase domain (DUF772) EBA04_21615 PF01609 Transposase DDE domain EBA04_21625 PF05598 Transposase domain (DUF772) EBA04_21625 PF01609 Transposase DDE domain EBA04_21630 PF04357 TamB, inner membrane protein subunit of TAM complex EBA04_21635 PF01103 Surface antigen EBA04_21635 PF17243 POTRA domain TamA domain 1 EBA04_21640 PF00593 TonB dependent receptor EBA04_21640 PF07715 TonB-dependent Receptor Plug Domain EBA04_21645 PF13181 Tetratricopeptide repeat EBA04_21650 PF02092 Glycyl-tRNA synthetase beta subunit EBA04_21650 PF05746 DALR anticodon binding domain EBA04_21655 PF02091 Glycyl-tRNA synthetase alpha subunit EBA04_21660 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EBA04_21660 PF00437 Type II/IV secretion system protein EBA04_21670 PF00117 Glutamine amidotransferase class-I EBA04_21670 PF00958 GMP synthase C terminal domain EBA04_21680 PF00902 Sec-independent protein translocase protein (TatC) EBA04_21685 PF02416 mttA/Hcf106 family EBA04_21690 PF02416 mttA/Hcf106 family EBA04_21700 PF00762 Ferrochelatase EBA04_21705 PF12697 Alpha/beta hydrolase family EBA04_21730 PF04381 Putative exonuclease, RdgC EBA04_21735 PF01171 PP-loop family EBA04_21755 PF00356 Bacterial regulatory proteins, lacI family EBA04_21760 PF07488 Glycosyl hydrolase family 67 middle domain EBA04_21760 PF07477 Glycosyl hydrolase family 67 C-terminus EBA04_21760 PF03648 Glycosyl hydrolase family 67 N-terminus EBA04_21770 PF13378 Enolase C-terminal domain-like EBA04_21770 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EBA04_21775 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain EBA04_21775 PF04616 Glycosyl hydrolases family 43 EBA04_21780 PF14310 Fibronectin type III-like domain EBA04_21780 PF01915 Glycosyl hydrolase family 3 C-terminal domain EBA04_21780 PF00933 Glycosyl hydrolase family 3 N terminal domain EBA04_21780 PF07691 PA14 domain EBA04_21785 PF01232 Mannitol dehydrogenase Rossmann domain EBA04_21785 PF08125 Mannitol dehydrogenase C-terminal domain EBA04_21795 PF05598 Transposase domain (DUF772) EBA04_21820 PF00665 Integrase core domain EBA04_21820 PF13936 Helix-turn-helix domain EBA04_21840 PF02614 Glucuronate isomerase EBA04_21845 PF00331 Glycosyl hydrolase family 10 EBA04_21845 PF00553 Cellulose binding domain EBA04_21845 PF03422 Carbohydrate binding module (family 6) EBA04_21875 PF04616 Glycosyl hydrolases family 43 EBA04_21885 PF05598 Transposase domain (DUF772) EBA04_21885 PF01609 Transposase DDE domain EBA04_21915 PF14765 Polyketide synthase dehydratase EBA04_21915 PF00109 Beta-ketoacyl synthase, N-terminal domain EBA04_21915 PF16197 Ketoacyl-synthetase C-terminal extension EBA04_21915 PF08659 KR domain EBA04_21915 PF02801 Beta-ketoacyl synthase, C-terminal domain EBA04_21915 PF00698 Acyl transferase domain EBA04_21915 PF08240 Alcohol dehydrogenase GroES-like domain EBA04_21915 PF00550 Phosphopantetheine attachment site EBA04_21915 PF00107 Zinc-binding dehydrogenase EBA04_21920 PF01553 Acyltransferase EBA04_21935 PF00356 Bacterial regulatory proteins, lacI family EBA04_21950 PF04820 Tryptophan halogenase EBA04_21955 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EBA04_21960 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) EBA04_21965 PF04337 Protein of unknown function, DUF480 EBA04_21980 PF13361 UvrD-like helicase C-terminal domain EBA04_21980 PF00580 UvrD/REP helicase N-terminal domain EBA04_21985 PF00265 Thymidine kinase EBA04_21995 PF04349 Periplasmic glucan biosynthesis protein, MdoG EBA04_22005 PF06827 Zinc finger found in FPG and IleRS EBA04_22005 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EBA04_22005 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EBA04_22010 PF05598 Transposase domain (DUF772) EBA04_22045 PF01590 GAF domain EBA04_22045 PF13426 PAS domain EBA04_22045 PF00360 Phytochrome region EBA04_22045 PF08446 PAS fold EBA04_22050 PF01126 Heme oxygenase EBA04_22055 PF07690 Major Facilitator Superfamily EBA04_22060 PF01263 Aldose 1-epimerase EBA04_22070 PF02810 SEC-C motif EBA04_22075 PF01925 Sulfite exporter TauE/SafE EBA04_22080 PF05598 Transposase domain (DUF772) EBA04_22110 PF02463 RecF/RecN/SMC N terminal domain EBA04_22115 PF01227 GTP cyclohydrolase I EBA04_22145 PF13936 Helix-turn-helix domain EBA04_22145 PF00665 Integrase core domain EBA04_22155 PF00083 Sugar (and other) transporter EBA04_22160 PF05598 Transposase domain (DUF772) EBA04_22170 PF13091 PLD-like domain EBA04_22170 PF13396 Phospholipase_D-nuclease N-terminal EBA04_22215 PF00085 Thioredoxin EBA04_22230 PF13344 Haloacid dehalogenase-like hydrolase EBA04_22230 PF00293 NUDIX domain EBA04_22265 PF05532 CsbD-like EBA04_22285 PF00294 pfkB family carbohydrate kinase EBA04_22295 PF07055 Enoyl reductase FAD binding domain EBA04_22295 PF12241 Trans-2-enoyl-CoA reductase catalytic region EBA04_22295 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase EBA04_22315 PF01070 FMN-dependent dehydrogenase EBA04_22330 PF05598 Transposase domain (DUF772) EBA04_22340 PF00593 TonB dependent receptor EBA04_22340 PF07715 TonB-dependent Receptor Plug Domain EBA04_22345 PF00155 Aminotransferase class I and II EBA04_22350 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain EBA04_22370 PF05598 Transposase domain (DUF772) EBA04_22380 PF01609 Transposase DDE domain EBA04_22380 PF05598 Transposase domain (DUF772) EBA04_22400 PF03412 Peptidase C39 family EBA04_22400 PF00005 ABC transporter EBA04_22400 PF00664 ABC transporter transmembrane region EBA04_22405 PF05598 Transposase domain (DUF772) EBA04_22430 PF00849 RNA pseudouridylate synthase EBA04_22445 PF01131 DNA topoisomerase EBA04_22445 PF01751 Toprim domain EBA04_22445 PF01396 Topoisomerase DNA binding C4 zinc finger EBA04_22465 PF01609 Transposase DDE domain EBA04_22465 PF05598 Transposase domain (DUF772) EBA04_22485 PF05598 Transposase domain (DUF772) EBA04_22485 PF01609 Transposase DDE domain EBA04_22510 PF05598 Transposase domain (DUF772) EBA04_22510 PF01609 Transposase DDE domain EBA04_22580 PF13538 UvrD-like helicase C-terminal domain EBA04_22585 PF00580 UvrD/REP helicase N-terminal domain EBA04_22585 PF13361 UvrD-like helicase C-terminal domain EBA04_22585 PF12705 PD-(D/E)XK nuclease superfamily EBA04_22590 PF17946 RecC C-terminal domain EBA04_22595 PF00005 ABC transporter EBA04_22605 PF01609 Transposase DDE domain EBA04_22605 PF05598 Transposase domain (DUF772) EBA04_22610 PF05598 Transposase domain (DUF772) EBA04_22610 PF01609 Transposase DDE domain EBA04_22620 PF00005 ABC transporter EBA04_22640 PF00005 ABC transporter EBA04_22645 PF02405 Permease MlaE EBA04_22650 PF02470 MlaD protein EBA04_22655 PF05494 MlaC protein EBA04_22665 PF04333 MlaA lipoprotein EBA04_22690 PF00255 Glutathione peroxidase EBA04_22700 PF02646 RmuC family EBA04_22705 PF05598 Transposase domain (DUF772) EBA04_22705 PF01609 Transposase DDE domain EBA04_22725 PF13556 PucR C-terminal helix-turn-helix domain EBA04_22725 PF07905 Purine catabolism regulatory protein-like family EBA04_22730 PF02595 Glycerate kinase family EBA04_22735 PF07690 Major Facilitator Superfamily EBA04_22750 PF17785 PUA-like domain EBA04_22750 PF10672 S-adenosylmethionine-dependent methyltransferase EBA04_22760 PF03741 Integral membrane protein TerC family EBA04_22770 PF01694 Rhomboid family EBA04_22775 PF03009 Glycerophosphoryl diester phosphodiesterase family EBA04_22785 PF01569 PAP2 superfamily EBA04_22790 PF01926 50S ribosome-binding GTPase EBA04_22790 PF12631 MnmE helical domain EBA04_22790 PF10396 GTP-binding protein TrmE N-terminus EBA04_22795 PF01522 Polysaccharide deacetylase EBA04_22800 PF02096 60Kd inner membrane protein EBA04_22800 PF14849 YidC periplasmic domain EBA04_22805 PF00825 Ribonuclease P EBA04_22810 PF00468 Ribosomal protein L34