locus-tag class description EBA12_00010 PF00308 Bacterial dnaA protein EBA12_00010 PF08299 Bacterial dnaA protein helix-turn-helix EBA12_00010 PF11638 DnaA N-terminal domain EBA12_00015 PF02767 DNA polymerase III beta subunit, central domain EBA12_00015 PF02768 DNA polymerase III beta subunit, C-terminal domain EBA12_00015 PF00712 DNA polymerase III beta subunit, N-terminal domain EBA12_00020 PF02463 RecF/RecN/SMC N terminal domain EBA12_00025 PF18053 DNA gyrase B subunit insert domain EBA12_00025 PF00986 DNA gyrase B subunit, carboxyl terminus EBA12_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_00025 PF00204 DNA gyrase B EBA12_00025 PF01751 Toprim domain EBA12_00035 PF01435 Peptidase family M48 EBA12_00045 PF03544 Gram-negative bacterial TonB protein C-terminal EBA12_00050 PF01618 MotA/TolQ/ExbB proton channel family EBA12_00055 PF02472 Biopolymer transport protein ExbD/TolR EBA12_00060 PF02472 Biopolymer transport protein ExbD/TolR EBA12_00065 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ EBA12_00090 PF05598 Transposase domain (DUF772) EBA12_00095 PF05598 Transposase domain (DUF772) EBA12_00095 PF01609 Transposase DDE domain EBA12_00110 PF04055 Radical SAM superfamily EBA12_00120 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) EBA12_00145 PF03572 Peptidase family S41 EBA12_00145 PF13180 PDZ domain EBA12_00150 PF01551 Peptidase family M23 EBA12_00160 PF04389 Peptidase family M28 EBA12_00170 PF00150 Cellulase (glycosyl hydrolase family 5) EBA12_00185 PF00150 Cellulase (glycosyl hydrolase family 5) EBA12_00195 PF00150 Cellulase (glycosyl hydrolase family 5) EBA12_00205 PF08240 Alcohol dehydrogenase GroES-like domain EBA12_00205 PF00107 Zinc-binding dehydrogenase EBA12_00230 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EBA12_00230 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA12_00235 PF01645 Conserved region in glutamate synthase EBA12_00235 PF01493 GXGXG motif EBA12_00235 PF04898 Glutamate synthase central domain EBA12_00235 PF00310 Glutamine amidotransferases class-II EBA12_00305 PF00270 DEAD/DEAH box helicase EBA12_00305 PF09369 Domain of unknown function (DUF1998) EBA12_00305 PF00271 Helicase conserved C-terminal domain EBA12_00310 PF03006 Haemolysin-III related EBA12_00340 PF00080 Copper/zinc superoxide dismutase (SODC) EBA12_00345 PF00158 Sigma-54 interaction domain EBA12_00345 PF00072 Response regulator receiver domain EBA12_00345 PF02954 Bacterial regulatory protein, Fis family EBA12_00350 PF00989 PAS fold EBA12_00350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_00350 PF00512 His Kinase A (phospho-acceptor) domain EBA12_00355 PF00909 Ammonium Transporter Family EBA12_00360 PF00543 Nitrogen regulatory protein P-II EBA12_00365 PF03951 Glutamine synthetase, beta-Grasp domain EBA12_00365 PF00120 Glutamine synthetase, catalytic domain EBA12_00370 PF02673 Bacitracin resistance protein BacA EBA12_00415 PF03061 Thioesterase superfamily EBA12_00420 PF13091 PLD-like domain EBA12_00435 PF01883 Iron-sulfur cluster assembly protein EBA12_00435 PF10609 NUBPL iron-transfer P-loop NTPase EBA12_00455 PF01381 Helix-turn-helix EBA12_00460 PF07804 HipA-like C-terminal domain EBA12_00460 PF13657 HipA N-terminal domain EBA12_00465 PF10017 Histidine-specific methyltransferase, SAM-dependent EBA12_00470 PF12867 DinB superfamily EBA12_00470 PF03781 Sulfatase-modifying factor enzyme 1 EBA12_00480 PF00528 Binding-protein-dependent transport system inner membrane component EBA12_00485 PF00005 ABC transporter EBA12_00485 PF00571 CBS domain EBA12_00500 PF00005 ABC transporter EBA12_00515 PF01734 Patatin-like phospholipase EBA12_00525 PF01037 Lrp/AsnC ligand binding domain EBA12_00530 PF00351 Biopterin-dependent aromatic amino acid hydroxylase EBA12_00560 PF00356 Bacterial regulatory proteins, lacI family EBA12_00595 PF00128 Alpha amylase, catalytic domain EBA12_00595 PF02806 Alpha amylase, C-terminal all-beta domain EBA12_00595 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EBA12_00600 PF16657 Maltogenic Amylase, C-terminal domain EBA12_00600 PF00128 Alpha amylase, catalytic domain EBA12_00605 PF11896 Domain of unknown function (DUF3416) EBA12_00605 PF00128 Alpha amylase, catalytic domain EBA12_00615 PF01609 Transposase DDE domain EBA12_00615 PF05598 Transposase domain (DUF772) EBA12_00625 PF00108 Thiolase, N-terminal domain EBA12_00625 PF02803 Thiolase, C-terminal domain EBA12_00665 PF00581 Rhodanese-like domain EBA12_00670 PF02556 Preprotein translocase subunit SecB EBA12_00675 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EBA12_00675 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EBA12_00685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EBA12_00685 PF00205 Thiamine pyrophosphate enzyme, central domain EBA12_00685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EBA12_00690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_00690 PF00512 His Kinase A (phospho-acceptor) domain EBA12_00695 PF00158 Sigma-54 interaction domain EBA12_00695 PF00072 Response regulator receiver domain EBA12_00695 PF02954 Bacterial regulatory protein, Fis family EBA12_00710 PF07690 Major Facilitator Superfamily EBA12_00715 PF05598 Transposase domain (DUF772) EBA12_00715 PF01609 Transposase DDE domain EBA12_00725 PF00588 SpoU rRNA Methylase family EBA12_00740 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EBA12_00740 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EBA12_00745 PF02661 Fic/DOC family EBA12_00745 PF13784 Fic/DOC family N-terminal EBA12_00750 PF00561 alpha/beta hydrolase fold EBA12_00760 PF03692 Putative zinc- or iron-chelating domain EBA12_00765 PF00501 AMP-binding enzyme EBA12_00770 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family EBA12_00785 PF07478 D-ala D-ala ligase C-terminus EBA12_00785 PF01820 D-ala D-ala ligase N-terminus EBA12_00800 PF03109 ABC1 family EBA12_00815 PF00849 RNA pseudouridylate synthase EBA12_00825 PF00472 RF-1 domain EBA12_00845 PF01432 Peptidase family M3 EBA12_00885 PF00326 Prolyl oligopeptidase family EBA12_00890 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EBA12_00890 PF00364 Biotin-requiring enzyme EBA12_00890 PF02785 Biotin carboxylase C-terminal domain EBA12_00890 PF00289 Biotin carboxylase, N-terminal domain EBA12_00900 PF01039 Carboxyl transferase domain EBA12_00905 PF02770 Acyl-CoA dehydrogenase, middle domain EBA12_00905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EBA12_00905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EBA12_00950 PF02492 CobW/HypB/UreG, nucleotide-binding domain EBA12_00950 PF07683 Cobalamin synthesis protein cobW C-terminal domain EBA12_00970 PF03969 AFG1-like ATPase EBA12_00975 PF01047 MarR family EBA12_00980 PF02566 OsmC-like protein EBA12_01000 PF03377 TAL effector repeat EBA12_01005 PF04717 Type VI secretion system, phage-baseplate injector EBA12_01005 PF16671 Actin cross-linking domain EBA12_01030 PF00248 Aldo/keto reductase family EBA12_01045 PF00107 Zinc-binding dehydrogenase EBA12_01045 PF16884 N-terminal domain of oxidoreductase EBA12_01060 PF00849 RNA pseudouridylate synthase EBA12_01075 PF00270 DEAD/DEAH box helicase EBA12_01075 PF04408 Helicase associated domain (HA2) EBA12_01075 PF00271 Helicase conserved C-terminal domain EBA12_01075 PF08482 ATP-dependent helicase C-terminal EBA12_01085 PF07308 Protein of unknown function (DUF1456) EBA12_01090 PF13454 FAD-NAD(P)-binding EBA12_01110 PF00266 Aminotransferase class-V EBA12_01115 PF01546 Peptidase family M20/M25/M40 EBA12_01115 PF07687 Peptidase dimerisation domain EBA12_01155 PF05598 Transposase domain (DUF772) EBA12_01155 PF01609 Transposase DDE domain EBA12_01200 PF01026 TatD related DNase EBA12_01220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA12_01220 PF03466 LysR substrate binding domain EBA12_01225 PF07690 Major Facilitator Superfamily EBA12_01235 PF02146 Sir2 family EBA12_01240 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EBA12_01245 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EBA12_01245 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EBA12_01265 PF00551 Formyl transferase EBA12_01270 PF00486 Transcriptional regulatory protein, C terminal EBA12_01270 PF00072 Response regulator receiver domain EBA12_01290 PF02677 Epoxyqueuosine reductase QueH EBA12_01295 PF03466 LysR substrate binding domain EBA12_01295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA12_01300 PF03358 NADPH-dependent FMN reductase EBA12_01310 PF08267 Cobalamin-independent synthase, N-terminal domain EBA12_01310 PF01717 Cobalamin-independent synthase, Catalytic domain EBA12_01315 PF03812 2-keto-3-deoxygluconate permease EBA12_01325 PF05368 NmrA-like family EBA12_01330 PF01638 HxlR-like helix-turn-helix EBA12_01365 PF05598 Transposase domain (DUF772) EBA12_01365 PF01609 Transposase DDE domain EBA12_01380 PF03377 TAL effector repeat EBA12_01385 PF04717 Type VI secretion system, phage-baseplate injector EBA12_01385 PF16671 Actin cross-linking domain EBA12_01390 PF00589 Phage integrase family EBA12_01390 PF13495 Phage integrase, N-terminal SAM-like domain EBA12_01395 PF05598 Transposase domain (DUF772) EBA12_01400 PF00920 Dehydratase family EBA12_01405 PF03692 Putative zinc- or iron-chelating domain EBA12_01410 PF00132 Bacterial transferase hexapeptide (six repeats) EBA12_01415 PF07690 Major Facilitator Superfamily EBA12_01420 PF01966 HD domain EBA12_01420 PF11871 Domain of unknown function (DUF3391) EBA12_01450 PF01494 FAD binding domain EBA12_01470 PF00111 2Fe-2S iron-sulfur cluster binding domain EBA12_01470 PF00175 Oxidoreductase NAD-binding domain EBA12_01475 PF00355 Rieske [2Fe-2S] domain EBA12_01480 PF01144 Coenzyme A transferase EBA12_01485 PF01144 Coenzyme A transferase EBA12_01490 PF00108 Thiolase, N-terminal domain EBA12_01490 PF02803 Thiolase, C-terminal domain EBA12_01495 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal EBA12_01495 PF00775 Dioxygenase EBA12_01510 PF00206 Lyase EBA12_01510 PF10397 Adenylosuccinate lyase C-terminus EBA12_01515 PF12146 Serine aminopeptidase, S33 EBA12_01520 PF02627 Carboxymuconolactone decarboxylase family EBA12_01535 PF01614 Bacterial transcriptional regulator EBA12_01535 PF09339 IclR helix-turn-helix domain EBA12_01560 PF01134 Glucose inhibited division protein A EBA12_01560 PF13932 GidA associated domain EBA12_01575 PF00291 Pyridoxal-phosphate dependent enzyme EBA12_01595 PF13649 Methyltransferase domain EBA12_01605 PF12697 Alpha/beta hydrolase family EBA12_01615 PF00155 Aminotransferase class I and II EBA12_01620 PF04055 Radical SAM superfamily EBA12_01620 PF06968 Biotin and Thiamin Synthesis associated domain EBA12_01630 PF01040 UbiA prenyltransferase family EBA12_01650 PF05819 NolX protein EBA12_01710 PF01313 Bacterial export proteins, family 3 EBA12_01715 PF00813 FliP family EBA12_01730 PF00771 FHIPEP family EBA12_01735 PF01312 FlhB HrpN YscU SpaS Family EBA12_01750 PF01514 Secretory protein of YscJ/FliF family EBA12_01765 PF18269 T3SS EscN ATPase C-terminal domain EBA12_01765 PF02874 ATP synthase alpha/beta family, beta-barrel domain EBA12_01765 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EBA12_01775 PF01311 Bacterial export proteins, family 1 EBA12_01790 PF01464 Transglycosylase SLT domain EBA12_01810 PF12794 Mechanosensitive ion channel inner membrane domain 1 EBA12_01810 PF12795 Mechanosensitive ion channel porin domain EBA12_01810 PF00924 Mechanosensitive ion channel EBA12_01820 PF01609 Transposase DDE domain EBA12_01820 PF05598 Transposase domain (DUF772) EBA12_01825 PF03109 ABC1 family EBA12_01835 PF05661 Protein of unknown function (DUF808) EBA12_01845 PF00990 Diguanylate cyclase, GGDEF domain EBA12_01845 PF00072 Response regulator receiver domain EBA12_01850 PF00534 Glycosyl transferases group 1 EBA12_01850 PF08323 Starch synthase catalytic domain EBA12_01855 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EBA12_01855 PF02806 Alpha amylase, C-terminal all-beta domain EBA12_01855 PF00128 Alpha amylase, catalytic domain EBA12_01860 PF11941 Domain of unknown function (DUF3459) EBA12_01860 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EBA12_01860 PF00128 Alpha amylase, catalytic domain EBA12_01865 PF02446 4-alpha-glucanotransferase EBA12_01870 PF00128 Alpha amylase, catalytic domain EBA12_01880 PF00128 Alpha amylase, catalytic domain EBA12_01880 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EBA12_01885 PF13460 NAD(P)H-binding EBA12_01890 PF05598 Transposase domain (DUF772) EBA12_01915 PF06903 VirK protein EBA12_01920 PF05598 Transposase domain (DUF772) EBA12_01925 PF05598 Transposase domain (DUF772) EBA12_01940 PF00270 DEAD/DEAH box helicase EBA12_01940 PF00271 Helicase conserved C-terminal domain EBA12_01950 PF01609 Transposase DDE domain EBA12_01950 PF05598 Transposase domain (DUF772) EBA12_01965 PF02817 e3 binding domain EBA12_01965 PF00364 Biotin-requiring enzyme EBA12_01965 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EBA12_01975 PF02780 Transketolase, C-terminal domain EBA12_01975 PF02779 Transketolase, pyrimidine binding domain EBA12_01980 PF00676 Dehydrogenase E1 component EBA12_01990 PF03301 Tryptophan 2,3-dioxygenase EBA12_01995 PF00854 POT family EBA12_02005 PF01047 MarR family EBA12_02010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EBA12_02015 PF04209 homogentisate 1,2-dioxygenase EBA12_02025 PF03334 Na+/H+ antiporter subunit EBA12_02030 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) EBA12_02040 PF00361 Proton-conducting membrane transporter EBA12_02045 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EBA12_02050 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EBA12_02050 PF13244 Domain of unknown function (DUF4040) EBA12_02050 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter EBA12_02050 PF00361 Proton-conducting membrane transporter EBA12_02080 PF01259 SAICAR synthetase EBA12_02085 PF05099 Tellurite resistance protein TerB EBA12_02085 PF00226 DnaJ domain EBA12_02090 PF00834 Ribulose-phosphate 3 epimerase family EBA12_02095 PF00583 Acetyltransferase (GNAT) family EBA12_02100 PF00781 Diacylglycerol kinase catalytic domain EBA12_02105 PF00425 chorismate binding enzyme EBA12_02105 PF04715 Anthranilate synthase component I, N terminal region EBA12_02120 PF00117 Glutamine amidotransferase class-I EBA12_02135 PF00591 Glycosyl transferase family, a/b domain EBA12_02135 PF02885 Glycosyl transferase family, helical bundle domain EBA12_02140 PF00218 Indole-3-glycerol phosphate synthase EBA12_02150 PF00027 Cyclic nucleotide-binding domain EBA12_02150 PF00325 Bacterial regulatory proteins, crp family EBA12_02155 PF02675 S-adenosylmethionine decarboxylase EBA12_02160 PF00893 Small Multidrug Resistance protein EBA12_02165 PF03232 Ubiquinone biosynthesis protein COQ7 EBA12_02170 PF00572 Ribosomal protein L13 EBA12_02175 PF00380 Ribosomal protein S9/S16 EBA12_02190 PF00293 NUDIX domain EBA12_02195 PF04324 BFD-like [2Fe-2S] binding domain EBA12_02200 PF00210 Ferritin-like domain EBA12_02205 PF00672 HAMP domain EBA12_02205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_02205 PF00512 His Kinase A (phospho-acceptor) domain EBA12_02205 PF01627 Hpt domain EBA12_02205 PF00072 Response regulator receiver domain EBA12_02205 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EBA12_02210 PF00563 EAL domain EBA12_02210 PF00990 Diguanylate cyclase, GGDEF domain EBA12_02210 PF03707 Bacterial signalling protein N terminal repeat EBA12_02230 PF01521 Iron-sulphur cluster biosynthesis EBA12_02240 PF09297 NADH pyrophosphatase zinc ribbon domain EBA12_02240 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain EBA12_02240 PF00293 NUDIX domain EBA12_02245 PF17113 Regulatory signalling modulator protein AmpE EBA12_02245 PF03186 CobD/Cbib protein EBA12_02265 PF07690 Major Facilitator Superfamily EBA12_02275 PF07690 Major Facilitator Superfamily EBA12_02280 PF12805 FUSC-like inner membrane protein yccS EBA12_02290 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EBA12_02290 PF02844 Phosphoribosylglycinamide synthetase, N domain EBA12_02290 PF02843 Phosphoribosylglycinamide synthetase, C domain EBA12_02295 PF02142 MGS-like domain EBA12_02295 PF01808 AICARFT/IMPCHase bienzyme EBA12_02300 PF01066 CDP-alcohol phosphatidyltransferase EBA12_02310 PF02954 Bacterial regulatory protein, Fis family EBA12_02325 PF01381 Helix-turn-helix EBA12_02365 PF02785 Biotin carboxylase C-terminal domain EBA12_02365 PF00289 Biotin carboxylase, N-terminal domain EBA12_02365 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EBA12_02375 PF00364 Biotin-requiring enzyme EBA12_02380 PF01220 Dehydroquinase class II EBA12_02390 PF02683 Cytochrome C biogenesis protein transmembrane region EBA12_02390 PF11412 Disulphide bond corrector protein DsbC EBA12_02395 PF03091 CutA1 divalent ion tolerance protein EBA12_02415 PF18074 Primosomal protein N C-terminal domain EBA12_02415 PF00270 DEAD/DEAH box helicase EBA12_02415 PF00271 Helicase conserved C-terminal domain EBA12_02415 PF18319 PriA DNA helicase Cys-rich region (CRR) domain EBA12_02415 PF17764 3′ DNA-binding domain (3′BD) EBA12_02435 PF01554 MatE EBA12_02440 PF01343 Peptidase family S49 EBA12_02465 PF01300 Telomere recombination EBA12_02470 PF01751 Toprim domain EBA12_02470 PF01131 DNA topoisomerase EBA12_02470 PF13368 Topoisomerase C-terminal repeat EBA12_02480 PF07963 Prokaryotic N-terminal methylation motif EBA12_02480 PF00114 Pilin (bacterial filament) EBA12_02485 PF04361 Protein of unknown function (DUF494) EBA12_02490 PF17782 DprA winged helix domain EBA12_02490 PF02481 DNA recombination-mediator protein A EBA12_02495 PF01476 LysM domain EBA12_02500 PF01327 Polypeptide deformylase EBA12_02505 PF00551 Formyl transferase EBA12_02505 PF02911 Formyl transferase, C-terminal domain EBA12_02510 PF01029 NusB family EBA12_02510 PF01189 16S rRNA methyltransferase RsmB/F EBA12_02525 PF00535 Glycosyl transferase family 2 EBA12_02545 PF00925 GTP cyclohydrolase II EBA12_02560 PF03279 Bacterial lipid A biosynthesis acyltransferase EBA12_02565 PF02580 D-Tyr-tRNA(Tyr) deacylase EBA12_02570 PF04546 Sigma-70, non-essential region EBA12_02570 PF04545 Sigma-70, region 4 EBA12_02570 PF04539 Sigma-70 region 3 EBA12_02570 PF04542 Sigma-70 region 2 EBA12_02570 PF00140 Sigma-70 factor, region 1.2 EBA12_02570 PF03979 Sigma-70 factor, region 1.1 EBA12_02600 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EBA12_02600 PF07498 Rho termination factor, N-terminal domain EBA12_02600 PF07497 Rho termination factor, RNA-binding domain EBA12_02605 PF00085 Thioredoxin EBA12_02610 PF00270 DEAD/DEAH box helicase EBA12_02610 PF00271 Helicase conserved C-terminal domain EBA12_02610 PF12300 ATP-dependent RNA helicase RhlB EBA12_02615 PF00005 ABC transporter EBA12_02620 PF18075 FtsX extracellular domain EBA12_02625 PF00072 Response regulator receiver domain EBA12_02630 PF03167 Uracil DNA glycosylase superfamily EBA12_02635 PF04545 Sigma-70, region 4 EBA12_02635 PF04542 Sigma-70 region 2 EBA12_02640 PF03458 UPF0126 domain EBA12_02645 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA12_02665 PF00166 Chaperonin 10 Kd subunit EBA12_02670 PF00118 TCP-1/cpn60 chaperonin family EBA12_02685 PF05598 Transposase domain (DUF772) EBA12_02685 PF01609 Transposase DDE domain EBA12_02695 PF01609 Transposase DDE domain EBA12_02695 PF05598 Transposase domain (DUF772) EBA12_02705 PF00793 DAHP synthetase I family EBA12_02720 PF08450 SMP-30/Gluconolactonase/LRE-like region EBA12_02730 PF08335 GlnD PII-uridylyltransferase EBA12_02730 PF03710 Glutamate-ammonia ligase adenylyltransferase EBA12_02735 PF02592 Putative vitamin uptake transporter EBA12_02745 PF05598 Transposase domain (DUF772) EBA12_02775 PF00881 Nitroreductase family EBA12_02780 PF04264 YceI-like domain EBA12_02805 PF17831 Pyruvate dehydrogenase E1 component middle domain EBA12_02805 PF00456 Transketolase, thiamine diphosphate binding domain EBA12_02815 PF05598 Transposase domain (DUF772) EBA12_02830 PF05598 Transposase domain (DUF772) EBA12_02835 PF04717 Type VI secretion system, phage-baseplate injector EBA12_02835 PF16671 Actin cross-linking domain EBA12_02860 PF05598 Transposase domain (DUF772) EBA12_02885 PF03377 TAL effector repeat EBA12_02895 PF00106 short chain dehydrogenase EBA12_02935 PF07759 Protein of unknown function (DUF1615) EBA12_02950 PF00892 EamA-like transporter family EBA12_02955 PF03330 Lytic transglycolase EBA12_02960 PF00041 Fibronectin type III domain EBA12_02960 PF01341 Glycosyl hydrolases family 6 EBA12_02960 PF00553 Cellulose binding domain EBA12_02970 PF00324 Amino acid permease EBA12_02980 PF01544 CorA-like Mg2+ transporter protein EBA12_03015 PF05598 Transposase domain (DUF772) EBA12_03025 PF01204 Trehalase EBA12_03060 PF00563 EAL domain EBA12_03060 PF13188 PAS domain EBA12_03060 PF03707 Bacterial signalling protein N terminal repeat EBA12_03060 PF00990 Diguanylate cyclase, GGDEF domain EBA12_03085 PF00553 Cellulose binding domain EBA12_03085 PF00150 Cellulase (glycosyl hydrolase family 5) EBA12_03090 PF01740 STAS domain EBA12_03090 PF00916 Sulfate permease family EBA12_03095 PF08448 PAS fold EBA12_03095 PF00990 Diguanylate cyclase, GGDEF domain EBA12_03115 PF13632 Glycosyl transferase family group 2 EBA12_03125 PF07694 5TMR of 5TMR-LYT EBA12_03125 PF06580 Histidine kinase EBA12_03130 PF00072 Response regulator receiver domain EBA12_03130 PF04397 LytTr DNA-binding domain EBA12_03135 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain EBA12_03135 PF03900 Porphobilinogen deaminase, C-terminal domain EBA12_03160 PF00326 Prolyl oligopeptidase family EBA12_03160 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain EBA12_03170 PF00155 Aminotransferase class I and II EBA12_03175 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain EBA12_03175 PF00326 Prolyl oligopeptidase family EBA12_03180 PF04304 Protein of unknown function (DUF454) EBA12_03190 PF01678 Diaminopimelate epimerase EBA12_03200 PF00589 Phage integrase family EBA12_03200 PF02899 Phage integrase, N-terminal SAM-like domain EBA12_03210 PF00227 Proteasome subunit EBA12_03215 PF10431 C-terminal, D2-small domain, of ClpB protein EBA12_03215 PF00004 ATPase family associated with various cellular activities (AAA) EBA12_03215 PF07724 AAA domain (Cdc48 subfamily) EBA12_03225 PF13673 Acetyltransferase (GNAT) domain EBA12_03240 PF01209 ubiE/COQ5 methyltransferase family EBA12_03245 PF00563 EAL domain EBA12_03245 PF03707 Bacterial signalling protein N terminal repeat EBA12_03245 PF00990 Diguanylate cyclase, GGDEF domain EBA12_03250 PF01433 Peptidase family M1 domain EBA12_03250 PF11838 ERAP1-like C-terminal domain EBA12_03265 PF00294 pfkB family carbohydrate kinase EBA12_03275 PF04085 rod shape-determining protein MreC EBA12_03285 PF00905 Penicillin binding protein transpeptidase domain EBA12_03285 PF03717 Penicillin-binding Protein dimerisation domain EBA12_03290 PF01098 Cell cycle protein EBA12_03310 PF00295 Glycosyl hydrolases family 28 EBA12_03315 PF13406 Transglycosylase SLT domain EBA12_03320 PF03330 Lytic transglycolase EBA12_03320 PF05036 Sporulation related domain EBA12_03325 PF07943 Penicillin-binding protein 5, C-terminal domain EBA12_03325 PF00768 D-alanyl-D-alanine carboxypeptidase EBA12_03340 PF04359 Protein of unknown function (DUF493) EBA12_03345 PF03099 Biotin/lipoate A/B protein ligase family EBA12_03350 PF04055 Radical SAM superfamily EBA12_03350 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family EBA12_03355 PF03572 Peptidase family S41 EBA12_03355 PF00595 PDZ domain EBA12_03355 PF11818 C-terminal domain of tail specific protease (DUF3340) EBA12_03355 PF17804 Tail specific protease N-terminal domain EBA12_03365 PF00293 NUDIX domain EBA12_03365 PF01467 Cytidylyltransferase-like EBA12_03400 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EBA12_03400 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EBA12_03405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EBA12_03405 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EBA12_03410 PF04972 BON domain EBA12_03415 PF01590 GAF domain EBA12_03415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_03415 PF08446 PAS fold EBA12_03415 PF00360 Phytochrome region EBA12_03415 PF00512 His Kinase A (phospho-acceptor) domain EBA12_03420 PF00072 Response regulator receiver domain EBA12_03425 PF00512 His Kinase A (phospho-acceptor) domain EBA12_03425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_03430 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EBA12_03455 PF05598 Transposase domain (DUF772) EBA12_03455 PF01609 Transposase DDE domain EBA12_03475 PF02836 Glycosyl hydrolases family 2, TIM barrel domain EBA12_03475 PF00703 Glycosyl hydrolases family 2 EBA12_03475 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 EBA12_03475 PF16355 Domain of unknown function (DUF4982) EBA12_03475 PF02837 Glycosyl hydrolases family 2, sugar binding domain EBA12_03495 PF07690 Major Facilitator Superfamily EBA12_03500 PF00356 Bacterial regulatory proteins, lacI family EBA12_03505 PF01380 SIS domain EBA12_03510 PF01979 Amidohydrolase family EBA12_03525 PF00535 Glycosyl transferase family 2 EBA12_03530 PF01522 Polysaccharide deacetylase EBA12_03530 PF14883 Hypothetical glycosyl hydrolase family 13 EBA12_03545 PF12627 Probable RNA and SrmB- binding site of polymerase A EBA12_03545 PF01743 Poly A polymerase head domain EBA12_03545 PF01966 HD domain EBA12_03550 PF05598 Transposase domain (DUF772) EBA12_03550 PF01609 Transposase DDE domain EBA12_03590 PF00034 Cytochrome c EBA12_03595 PF01926 50S ribosome-binding GTPase EBA12_03605 PF04107 Glutamate-cysteine ligase family 2(GCS2) EBA12_03635 PF16527 Two-component sensor protein CpxA, periplasmic domain EBA12_03635 PF00672 HAMP domain EBA12_03635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_03635 PF00512 His Kinase A (phospho-acceptor) domain EBA12_03640 PF00072 Response regulator receiver domain EBA12_03640 PF00486 Transcriptional regulatory protein, C terminal EBA12_03655 PF02583 Metal-sensitive transcriptional repressor EBA12_03660 PF00107 Zinc-binding dehydrogenase EBA12_03660 PF08240 Alcohol dehydrogenase GroES-like domain EBA12_03665 PF04828 Glutathione-dependent formaldehyde-activating enzyme EBA12_03670 PF00756 Putative esterase EBA12_03680 PF01609 Transposase DDE domain EBA12_03680 PF05598 Transposase domain (DUF772) EBA12_03695 PF12848 ABC transporter EBA12_03695 PF00005 ABC transporter EBA12_03715 PF00464 Serine hydroxymethyltransferase EBA12_03725 PF03477 ATP cone domain EBA12_03735 PF01872 RibD C-terminal domain EBA12_03735 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EBA12_03745 PF00677 Lumazine binding domain EBA12_03750 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EBA12_03750 PF00925 GTP cyclohydrolase II EBA12_03755 PF00885 6,7-dimethyl-8-ribityllumazine synthase EBA12_03760 PF01029 NusB family EBA12_03765 PF02769 AIR synthase related protein, C-terminal domain EBA12_03765 PF00586 AIR synthase related protein, N-terminal domain EBA12_03780 PF05598 Transposase domain (DUF772) EBA12_03795 PF03814 Potassium-transporting ATPase A subunit EBA12_03805 PF02669 K+-transporting ATPase, c chain EBA12_03810 PF00512 His Kinase A (phospho-acceptor) domain EBA12_03810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_03810 PF02702 Osmosensitive K+ channel His kinase sensor domain EBA12_03810 PF13492 GAF domain EBA12_03810 PF13493 Domain of unknown function (DUF4118) EBA12_03815 PF00486 Transcriptional regulatory protein, C terminal EBA12_03815 PF00072 Response regulator receiver domain EBA12_03845 PF02913 FAD linked oxidases, C-terminal domain EBA12_03845 PF01565 FAD binding domain EBA12_03855 PF02021 Uncharacterised protein family UPF0102 EBA12_03865 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EBA12_03890 PF02381 MraZ protein, putative antitoxin-like EBA12_03895 PF01795 MraW methylase family EBA12_03900 PF04999 Cell division protein FtsL EBA12_03905 PF03717 Penicillin-binding Protein dimerisation domain EBA12_03905 PF00905 Penicillin binding protein transpeptidase domain EBA12_03910 PF08245 Mur ligase middle domain EBA12_03910 PF02875 Mur ligase family, glutamate ligase domain EBA12_03910 PF01225 Mur ligase family, catalytic domain EBA12_03915 PF01225 Mur ligase family, catalytic domain EBA12_03915 PF02875 Mur ligase family, glutamate ligase domain EBA12_03915 PF08245 Mur ligase middle domain EBA12_03920 PF00953 Glycosyl transferase family 4 EBA12_03925 PF01098 Cell cycle protein EBA12_03930 PF04101 Glycosyltransferase family 28 C-terminal domain EBA12_03930 PF03033 Glycosyltransferase family 28 N-terminal domain EBA12_03935 PF01225 Mur ligase family, catalytic domain EBA12_03935 PF02875 Mur ligase family, glutamate ligase domain EBA12_03935 PF08245 Mur ligase middle domain EBA12_03940 PF07478 D-ala D-ala ligase C-terminus EBA12_03940 PF01820 D-ala D-ala ligase N-terminus EBA12_03945 PF03799 Cell division protein FtsQ EBA12_03945 PF08478 POTRA domain, FtsQ-type EBA12_03950 PF02491 SHS2 domain inserted in FTSA EBA12_03955 PF00091 Tubulin/FtsZ family, GTPase domain EBA12_03955 PF12327 FtsZ family, C-terminal domain EBA12_03960 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase EBA12_03970 PF10145 Phage-related minor tail protein EBA12_03970 PF01464 Transglycosylase SLT domain EBA12_03970 PF01551 Peptidase family M23 EBA12_03975 PF02810 SEC-C motif EBA12_03975 PF07517 SecA DEAD-like domain EBA12_03975 PF01043 SecA preprotein cross-linking domain EBA12_03975 PF07516 SecA Wing and Scaffold domain EBA12_03985 PF00293 NUDIX domain EBA12_04000 PF02219 Methylenetetrahydrofolate reductase EBA12_04015 PF08659 KR domain EBA12_04015 PF00550 Phosphopantetheine attachment site EBA12_04015 PF02801 Beta-ketoacyl synthase, C-terminal domain EBA12_04015 PF14765 Polyketide synthase dehydratase EBA12_04015 PF16197 Ketoacyl-synthetase C-terminal extension EBA12_04015 PF00107 Zinc-binding dehydrogenase EBA12_04015 PF08240 Alcohol dehydrogenase GroES-like domain EBA12_04015 PF00698 Acyl transferase domain EBA12_04015 PF00109 Beta-ketoacyl synthase, N-terminal domain EBA12_04020 PF00082 Subtilase family EBA12_04020 PF09286 Pro-kumamolisin, activation domain EBA12_04040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EBA12_04075 PF13649 Methyltransferase domain EBA12_04080 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain EBA12_04080 PF05221 S-adenosyl-L-homocysteine hydrolase EBA12_04090 PF00311 Phosphoenolpyruvate carboxylase EBA12_04105 PF00665 Integrase core domain EBA12_04105 PF13936 Helix-turn-helix domain EBA12_04125 PF00328 Histidine phosphatase superfamily (branch 2) EBA12_04130 PF02772 S-adenosylmethionine synthetase, central domain EBA12_04130 PF02773 S-adenosylmethionine synthetase, C-terminal domain EBA12_04130 PF00438 S-adenosylmethionine synthetase, N-terminal domain EBA12_04145 PF01207 Dihydrouridine synthase (Dus) EBA12_04155 PF00294 pfkB family carbohydrate kinase EBA12_04160 PF01773 Na+ dependent nucleoside transporter N-terminus EBA12_04160 PF07662 Na+ dependent nucleoside transporter C-terminus EBA12_04160 PF07670 Nucleoside recognition EBA12_04170 PF00248 Aldo/keto reductase family EBA12_04200 PF00005 ABC transporter EBA12_04210 PF02668 Taurine catabolism dioxygenase TauD, TfdA family EBA12_04220 PF00005 ABC transporter EBA12_04225 PF13472 GDSL-like Lipase/Acylhydrolase family EBA12_04230 PF00486 Transcriptional regulatory protein, C terminal EBA12_04230 PF00072 Response regulator receiver domain EBA12_04235 PF00512 His Kinase A (phospho-acceptor) domain EBA12_04235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_04235 PF08521 Two-component sensor kinase N-terminal EBA12_04250 PF01219 Prokaryotic diacylglycerol kinase EBA12_04270 PF01790 Prolipoprotein diacylglyceryl transferase EBA12_04275 PF00303 Thymidylate synthase EBA12_04285 PF00186 Dihydrofolate reductase EBA12_04290 PF00149 Calcineurin-like phosphoesterase EBA12_04295 PF04379 ApaG domain EBA12_04300 PF00398 Ribosomal RNA adenine dimethylase EBA12_04305 PF05598 Transposase domain (DUF772) EBA12_04315 PF04166 Pyridoxal phosphate biosynthetic protein PdxA EBA12_04320 PF00639 PPIC-type PPIASE domain EBA12_04320 PF09312 SurA N-terminal domain EBA12_04325 PF03968 OstA-like protein EBA12_04325 PF04453 LPS transport system D EBA12_04330 PF00850 Histone deacetylase domain EBA12_04335 PF01923 Cobalamin adenosyltransferase EBA12_04350 PF01494 FAD binding domain EBA12_04355 PF01494 FAD binding domain EBA12_04375 PF00392 Bacterial regulatory proteins, gntR family EBA12_04375 PF07729 FCD domain EBA12_04380 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase EBA12_04385 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit EBA12_04385 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase EBA12_04390 PF03466 LysR substrate binding domain EBA12_04390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA12_04395 PF13193 AMP-binding enzyme C-terminal domain EBA12_04395 PF00501 AMP-binding enzyme EBA12_04400 PF00171 Aldehyde dehydrogenase family EBA12_04405 PF00378 Enoyl-CoA hydratase/isomerase EBA12_04425 PF08450 SMP-30/Gluconolactonase/LRE-like region EBA12_04430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EBA12_04430 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EBA12_04435 PF18125 RlmM ferredoxin-like domain EBA12_04435 PF01728 FtsJ-like methyltransferase EBA12_04465 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain EBA12_04465 PF00749 tRNA synthetases class I (E and Q), catalytic domain EBA12_04475 PF00072 Response regulator receiver domain EBA12_04475 PF00196 Bacterial regulatory proteins, luxR family EBA12_04485 PF01625 Peptide methionine sulfoxide reductase EBA12_04490 PF00923 Transaldolase/Fructose-6-phosphate aldolase EBA12_04495 PF03449 Transcription elongation factor, N-terminal EBA12_04495 PF01272 Transcription elongation factor, GreA/GreB, C-term EBA12_04505 PF03466 LysR substrate binding domain EBA12_04505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA12_04510 PF13192 Thioredoxin domain EBA12_04510 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA12_04515 PF10417 C-terminal domain of 1-Cys peroxiredoxin EBA12_04515 PF00578 AhpC/TSA family EBA12_04520 PF17827 PrmC N-terminal domain EBA12_04520 PF05175 Methyltransferase small domain EBA12_04545 PF00561 alpha/beta hydrolase fold EBA12_04555 PF00293 NUDIX domain EBA12_04560 PF01612 3'-5' exonuclease EBA12_04560 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EBA12_04560 PF00476 DNA polymerase family A EBA12_04560 PF01367 5'-3' exonuclease, C-terminal SAM fold EBA12_04575 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch EBA12_04575 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EBA12_04575 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EBA12_04600 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch EBA12_04605 PF02233 NAD(P) transhydrogenase beta subunit EBA12_04630 PF01063 Amino-transferase class IV EBA12_04640 PF04073 Aminoacyl-tRNA editing domain EBA12_04650 PF17189 Glycosyl hydrolase family 30 beta sandwich domain EBA12_04650 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain EBA12_04665 PF03358 NADPH-dependent FMN reductase EBA12_04670 PF03631 Virulence factor BrkB EBA12_04675 PF08534 Redoxin EBA12_04680 PF00708 Acylphosphatase EBA12_04690 PF03976 Polyphosphate kinase 2 (PPK2) EBA12_04695 PF00994 Probable molybdopterin binding domain EBA12_04705 PF03462 PCRF domain EBA12_04705 PF00472 RF-1 domain EBA12_04710 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain EBA12_04710 PF01488 Shikimate / quinate 5-dehydrogenase EBA12_04710 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain EBA12_04720 PF03550 Outer membrane lipoprotein LolB EBA12_04725 PF00288 GHMP kinases N terminal domain EBA12_04725 PF08544 GHMP kinases C terminal EBA12_04735 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EBA12_04735 PF14572 Phosphoribosyl synthetase-associated domain EBA12_04740 PF01386 Ribosomal L25p family EBA12_04740 PF14693 Ribosomal protein TL5, C-terminal domain EBA12_04745 PF01195 Peptidyl-tRNA hydrolase EBA12_04750 PF01926 50S ribosome-binding GTPase EBA12_04750 PF06071 Protein of unknown function (DUF933) EBA12_04770 PF03144 Elongation factor Tu domain 2 EBA12_04770 PF03143 Elongation factor Tu C-terminal domain EBA12_04770 PF00009 Elongation factor Tu GTP binding domain EBA12_04780 PF00584 SecE/Sec61-gamma subunits of protein translocation complex EBA12_04785 PF02357 Transcription termination factor nusG EBA12_04785 PF00467 KOW motif EBA12_04795 PF00298 Ribosomal protein L11, RNA binding domain EBA12_04795 PF03946 Ribosomal protein L11, N-terminal domain EBA12_04800 PF00687 Ribosomal protein L1p/L10e family EBA12_04805 PF00466 Ribosomal protein L10 EBA12_04810 PF16320 Ribosomal protein L7/L12 dimerisation domain EBA12_04810 PF00542 Ribosomal protein L7/L12 C-terminal domain EBA12_04815 PF00562 RNA polymerase Rpb2, domain 6 EBA12_04815 PF04563 RNA polymerase beta subunit EBA12_04815 PF04561 RNA polymerase Rpb2, domain 2 EBA12_04815 PF04565 RNA polymerase Rpb2, domain 3 EBA12_04815 PF04560 RNA polymerase Rpb2, domain 7 EBA12_04815 PF10385 RNA polymerase beta subunit external 1 domain EBA12_04820 PF04983 RNA polymerase Rpb1, domain 3 EBA12_04820 PF05000 RNA polymerase Rpb1, domain 4 EBA12_04820 PF04998 RNA polymerase Rpb1, domain 5 EBA12_04820 PF00623 RNA polymerase Rpb1, domain 2 EBA12_04820 PF04997 RNA polymerase Rpb1, domain 1 EBA12_04825 PF00164 Ribosomal protein S12/S23 EBA12_04830 PF00177 Ribosomal protein S7p/S5e EBA12_04835 PF00679 Elongation factor G C-terminus EBA12_04835 PF14492 Elongation Factor G, domain II EBA12_04835 PF03764 Elongation factor G, domain IV EBA12_04835 PF00009 Elongation factor Tu GTP binding domain EBA12_04835 PF03144 Elongation factor Tu domain 2 EBA12_04840 PF00009 Elongation factor Tu GTP binding domain EBA12_04840 PF03143 Elongation factor Tu C-terminal domain EBA12_04840 PF03144 Elongation factor Tu domain 2 EBA12_04855 PF00338 Ribosomal protein S10p/S20e EBA12_04860 PF00297 Ribosomal protein L3 EBA12_04865 PF00573 Ribosomal protein L4/L1 family EBA12_04870 PF00276 Ribosomal protein L23 EBA12_04875 PF00181 Ribosomal Proteins L2, RNA binding domain EBA12_04875 PF03947 Ribosomal Proteins L2, C-terminal domain EBA12_04880 PF00203 Ribosomal protein S19 EBA12_04885 PF00237 Ribosomal protein L22p/L17e EBA12_04890 PF07650 KH domain EBA12_04890 PF00189 Ribosomal protein S3, C-terminal domain EBA12_04895 PF00252 Ribosomal protein L16p/L10e EBA12_04900 PF00831 Ribosomal L29 protein EBA12_04905 PF00366 Ribosomal protein S17 EBA12_04910 PF00238 Ribosomal protein L14p/L23e EBA12_04915 PF00467 KOW motif EBA12_04915 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EBA12_04920 PF00673 ribosomal L5P family C-terminus EBA12_04920 PF00281 Ribosomal protein L5 EBA12_04925 PF00253 Ribosomal protein S14p/S29e EBA12_04930 PF00410 Ribosomal protein S8 EBA12_04935 PF00347 Ribosomal protein L6 EBA12_04940 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EBA12_04945 PF00333 Ribosomal protein S5, N-terminal domain EBA12_04945 PF03719 Ribosomal protein S5, C-terminal domain EBA12_04950 PF00327 Ribosomal protein L30p/L7e EBA12_04955 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EBA12_04960 PF00344 SecY translocase EBA12_04965 PF00416 Ribosomal protein S13/S18 EBA12_04970 PF00411 Ribosomal protein S11 EBA12_04975 PF01479 S4 domain EBA12_04975 PF00163 Ribosomal protein S4/S9 N-terminal domain EBA12_04980 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EBA12_04980 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EBA12_04980 PF01000 RNA polymerase Rpb3/RpoA insert domain EBA12_04985 PF01196 Ribosomal protein L17 EBA12_04990 PF02600 Disulfide bond formation protein DsbB EBA12_05000 PF01474 Class-II DAHP synthetase family EBA12_05025 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EBA12_05030 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EBA12_05030 PF00056 lactate/malate dehydrogenase, NAD binding domain EBA12_05035 PF00043 Glutathione S-transferase, C-terminal domain EBA12_05035 PF02798 Glutathione S-transferase, N-terminal domain EBA12_05065 PF05598 Transposase domain (DUF772) EBA12_05065 PF01609 Transposase DDE domain EBA12_05085 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA12_05085 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EBA12_05090 PF08240 Alcohol dehydrogenase GroES-like domain EBA12_05090 PF00107 Zinc-binding dehydrogenase EBA12_05100 PF00691 OmpA family EBA12_05100 PF05736 OprF membrane domain EBA12_05110 PF00849 RNA pseudouridylate synthase EBA12_05120 PF00155 Aminotransferase class I and II EBA12_05130 PF00528 Binding-protein-dependent transport system inner membrane component EBA12_05135 PF00528 Binding-protein-dependent transport system inner membrane component EBA12_05140 PF12857 TOBE-like domain EBA12_05140 PF17850 CysA C-terminal regulatory domain EBA12_05140 PF00005 ABC transporter EBA12_05150 PF08240 Alcohol dehydrogenase GroES-like domain EBA12_05150 PF00107 Zinc-binding dehydrogenase EBA12_05170 PF10459 Peptidase S46 EBA12_05175 PF00300 Histidine phosphatase superfamily (branch 1) EBA12_05190 PF02875 Mur ligase family, glutamate ligase domain EBA12_05190 PF08245 Mur ligase middle domain EBA12_05205 PF00156 Phosphoribosyl transferase domain EBA12_05210 PF04305 Protein of unknown function (DUF455) EBA12_05235 PF00149 Calcineurin-like phosphoesterase EBA12_05240 PF01569 PAP2 superfamily EBA12_05245 PF00534 Glycosyl transferases group 1 EBA12_05245 PF13439 Glycosyltransferase Family 4 EBA12_05250 PF02541 Ppx/GppA phosphatase family EBA12_05255 PF13090 Polyphosphate kinase C-terminal domain 2 EBA12_05255 PF17941 Polyphosphate kinase C-terminal domain 1 EBA12_05255 PF13089 Polyphosphate kinase N-terminal domain EBA12_05255 PF02503 Polyphosphate kinase middle domain EBA12_05260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_05260 PF00989 PAS fold EBA12_05260 PF11808 Phosphate regulon sensor protein PhoR EBA12_05260 PF00512 His Kinase A (phospho-acceptor) domain EBA12_05265 PF00486 Transcriptional regulatory protein, C terminal EBA12_05265 PF00072 Response regulator receiver domain EBA12_05270 PF13181 Tetratricopeptide repeat EBA12_05270 PF01435 Peptidase family M48 EBA12_05275 PF00462 Glutaredoxin EBA12_05285 PF18324 Hypothetical protein TT1725 EBA12_05285 PF00180 Isocitrate/isopropylmalate dehydrogenase EBA12_05330 PF01609 Transposase DDE domain EBA12_05330 PF05598 Transposase domain (DUF772) EBA12_05355 PF05698 Bacterial trigger factor protein (TF) C-terminus EBA12_05355 PF05697 Bacterial trigger factor protein (TF) EBA12_05360 PF00574 Clp protease EBA12_05365 PF06689 ClpX C4-type zinc finger EBA12_05365 PF07724 AAA domain (Cdc48 subfamily) EBA12_05365 PF10431 C-terminal, D2-small domain, of ClpB protein EBA12_05370 PF00004 ATPase family associated with various cellular activities (AAA) EBA12_05370 PF05362 Lon protease (S16) C-terminal proteolytic domain EBA12_05370 PF02190 ATP-dependent protease La (LON) substrate-binding domain EBA12_05375 PF00216 Bacterial DNA-binding protein EBA12_05400 PF05257 CHAP domain EBA12_05400 PF01476 LysM domain EBA12_05405 PF00753 Metallo-beta-lactamase superfamily EBA12_05405 PF16123 Hydroxyacylglutathione hydrolase C-terminus EBA12_05415 PF00075 RNase H EBA12_05420 PF00929 Exonuclease EBA12_05430 PF05598 Transposase domain (DUF772) EBA12_05470 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EBA12_05480 PF00753 Metallo-beta-lactamase superfamily EBA12_05480 PF12706 Beta-lactamase superfamily domain EBA12_05485 PF06463 Molybdenum Cofactor Synthesis C EBA12_05485 PF04055 Radical SAM superfamily EBA12_05495 PF01967 MoaC family EBA12_05500 PF02597 ThiS family EBA12_05505 PF02391 MoaE protein EBA12_05535 PF12170 DNA polymerase III tau subunit V interacting with alpha EBA12_05535 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding EBA12_05535 PF12169 DNA polymerase III subunits gamma and tau domain III EBA12_05540 PF02575 YbaB/EbfC DNA-binding family EBA12_05545 PF13662 Toprim domain EBA12_05545 PF02132 RecR protein EBA12_05550 PF01230 HIT domain EBA12_05560 PF13559 Domain of unknown function (DUF4129) EBA12_05560 PF11992 Domain of unknown function (DUF3488) EBA12_05560 PF01841 Transglutaminase-like superfamily EBA12_05570 PF07726 ATPase family associated with various cellular activities (AAA) EBA12_05570 PF17863 AAA lid domain EBA12_05585 PF02545 Maf-like protein EBA12_05590 PF02620 Large ribosomal RNA subunit accumulation protein YceD EBA12_05595 PF01783 Ribosomal L32p protein family EBA12_05600 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EBA12_05600 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EBA12_05610 PF00698 Acyl transferase domain EBA12_05620 PF00550 Phosphopantetheine attachment site EBA12_05625 PF00109 Beta-ketoacyl synthase, N-terminal domain EBA12_05625 PF02801 Beta-ketoacyl synthase, C-terminal domain EBA12_05630 PF04715 Anthranilate synthase component I, N terminal region EBA12_05630 PF00425 chorismate binding enzyme EBA12_05635 PF02618 YceG-like family EBA12_05640 PF09115 DNA polymerase III, delta subunit, C terminal EBA12_05655 PF05598 Transposase domain (DUF772) EBA12_05670 PF02954 Bacterial regulatory protein, Fis family EBA12_05670 PF06506 Propionate catabolism activator EBA12_05670 PF00158 Sigma-54 interaction domain EBA12_05680 PF00285 Citrate synthase, C-terminal domain EBA12_05690 PF00330 Aconitase family (aconitate hydratase) EBA12_05690 PF00694 Aconitase C-terminal domain EBA12_05710 PF05598 Transposase domain (DUF772) EBA12_05710 PF01609 Transposase DDE domain EBA12_05715 PF04303 PrpF protein EBA12_05720 PF07715 TonB-dependent Receptor Plug Domain EBA12_05720 PF00593 TonB dependent receptor EBA12_05770 PF01556 DnaJ C terminal domain EBA12_05770 PF00226 DnaJ domain EBA12_05775 PF00072 Response regulator receiver domain EBA12_05785 PF01145 SPFH domain / Band 7 family EBA12_05785 PF12221 Bacterial membrane protein N terminal EBA12_05790 PF01145 SPFH domain / Band 7 family EBA12_05800 PF00709 Adenylosuccinate synthetase EBA12_05805 PF01433 Peptidase family M1 domain EBA12_05805 PF11838 ERAP1-like C-terminal domain EBA12_05820 PF01420 Type I restriction modification DNA specificity domain EBA12_05825 PF02384 N-6 DNA Methylase EBA12_05835 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EBA12_05835 PF08463 EcoEI R protein C-terminal EBA12_05835 PF00271 Helicase conserved C-terminal domain EBA12_05835 PF04851 Type III restriction enzyme, res subunit EBA12_05875 PF13456 Reverse transcriptase-like EBA12_05875 PF00300 Histidine phosphatase superfamily (branch 1) EBA12_05905 PF00717 Peptidase S24-like EBA12_05905 PF01726 LexA DNA binding domain EBA12_05920 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EBA12_05920 PF07733 Bacterial DNA polymerase III alpha NTPase domain EBA12_05920 PF14579 Helix-hairpin-helix motif EBA12_05920 PF02811 PHP domain EBA12_05940 PF03169 OPT oligopeptide transporter protein EBA12_05955 PF07676 WD40-like Beta Propeller Repeat EBA12_05955 PF00326 Prolyl oligopeptidase family EBA12_05955 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region EBA12_05965 PF02311 AraC-like ligand binding domain EBA12_05965 PF12833 Helix-turn-helix domain EBA12_06010 PF00199 Catalase EBA12_06010 PF06628 Catalase-related immune-responsive EBA12_06010 PF18011 C-terminal domain found in long catalases EBA12_06040 PF02347 Glycine cleavage system P-protein EBA12_06080 PF00884 Sulfatase EBA12_06080 PF08019 Phosphoethanolamine transferase EptA/EptB EBA12_06090 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase EBA12_06095 PF00072 Response regulator receiver domain EBA12_06095 PF00486 Transcriptional regulatory protein, C terminal EBA12_06100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_06100 PF08521 Two-component sensor kinase N-terminal EBA12_06100 PF00512 His Kinase A (phospho-acceptor) domain EBA12_06110 PF03776 Septum formation topological specificity factor MinE EBA12_06115 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EBA12_06120 PF05209 Septum formation inhibitor MinC, N-terminal domain EBA12_06120 PF03775 Septum formation inhibitor MinC, C-terminal domain EBA12_06130 PF07730 Histidine kinase EBA12_06135 PF00196 Bacterial regulatory proteins, luxR family EBA12_06135 PF00072 Response regulator receiver domain EBA12_06150 PF00730 HhH-GPD superfamily base excision DNA repair protein EBA12_06175 PF02222 ATP-grasp domain EBA12_06220 PF04972 BON domain EBA12_06220 PF00691 OmpA family EBA12_06240 PF04717 Type VI secretion system, phage-baseplate injector EBA12_06250 PF00665 Integrase core domain EBA12_06250 PF13936 Helix-turn-helix domain EBA12_06260 PF05598 Transposase domain (DUF772) EBA12_06265 PF05598 Transposase domain (DUF772) EBA12_06275 PF01609 Transposase DDE domain EBA12_06275 PF05598 Transposase domain (DUF772) EBA12_06300 PF05598 Transposase domain (DUF772) EBA12_06380 PF17871 AAA lid domain EBA12_06380 PF07724 AAA domain (Cdc48 subfamily) EBA12_06380 PF00004 ATPase family associated with various cellular activities (AAA) EBA12_06380 PF10431 C-terminal, D2-small domain, of ClpB protein EBA12_06390 PF16671 Actin cross-linking domain EBA12_06390 PF04717 Type VI secretion system, phage-baseplate injector EBA12_06425 PF01208 Uroporphyrinogen decarboxylase (URO-D) EBA12_06435 PF01761 3-dehydroquinate synthase EBA12_06440 PF01202 Shikimate kinase EBA12_06445 PF01243 Pyridoxamine 5'-phosphate oxidase EBA12_06445 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region EBA12_06455 PF04012 PspA/IM30 family EBA12_06480 PF03738 Glutathionylspermidine synthase preATP-grasp EBA12_06535 PF12706 Beta-lactamase superfamily domain EBA12_06545 PF05598 Transposase domain (DUF772) EBA12_06560 PF00324 Amino acid permease EBA12_06565 PF00196 Bacterial regulatory proteins, luxR family EBA12_06570 PF00561 alpha/beta hydrolase fold EBA12_06580 PF00324 Amino acid permease EBA12_06605 PF00145 C-5 cytosine-specific DNA methylase EBA12_06610 PF01609 Transposase DDE domain EBA12_06610 PF05598 Transposase domain (DUF772) EBA12_06620 PF02322 Cytochrome bd terminal oxidase subunit II EBA12_06625 PF00756 Putative esterase EBA12_06630 PF01769 Divalent cation transporter EBA12_06630 PF00571 CBS domain EBA12_06630 PF03448 MgtE intracellular N domain EBA12_06640 PF05524 PEP-utilising enzyme, N-terminal EBA12_06640 PF02896 PEP-utilising enzyme, TIM barrel domain EBA12_06640 PF00391 PEP-utilising enzyme, mobile domain EBA12_06645 PF00381 PTS HPr component phosphorylation site EBA12_06660 PF01609 Transposase DDE domain EBA12_06660 PF05598 Transposase domain (DUF772) EBA12_06675 PF03668 P-loop ATPase protein family EBA12_06680 PF07475 HPr Serine kinase C-terminal domain EBA12_06680 PF02603 HPr Serine kinase N terminus EBA12_06685 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EBA12_06690 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EBA12_06695 PF04552 Sigma-54, DNA binding domain EBA12_06695 PF00309 Sigma-54 factor, Activator interacting domain (AID) EBA12_06695 PF04963 Sigma-54 factor, core binding domain EBA12_06700 PF00005 ABC transporter EBA12_06705 PF03968 OstA-like protein EBA12_06720 PF00571 CBS domain EBA12_06720 PF01380 SIS domain EBA12_06725 PF01722 BolA-like protein EBA12_06730 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EBA12_06755 PF00551 Formyl transferase EBA12_06770 PF02769 AIR synthase related protein, C-terminal domain EBA12_06770 PF00586 AIR synthase related protein, N-terminal domain EBA12_06780 PF01594 AI-2E family transporter EBA12_06785 PF00308 Bacterial dnaA protein EBA12_06790 PF00483 Nucleotidyl transferase EBA12_06795 PF01636 Phosphotransferase enzyme family EBA12_06805 PF01546 Peptidase family M20/M25/M40 EBA12_06805 PF07687 Peptidase dimerisation domain EBA12_06830 PF01609 Transposase DDE domain EBA12_06830 PF05598 Transposase domain (DUF772) EBA12_06840 PF00355 Rieske [2Fe-2S] domain EBA12_06850 PF00266 Aminotransferase class-V EBA12_06855 PF01458 Uncharacterized protein family (UPF0051) EBA12_06860 PF00005 ABC transporter EBA12_06865 PF01458 Uncharacterized protein family (UPF0051) EBA12_06870 PF02082 Transcriptional regulator EBA12_06920 PF14748 Pyrroline-5-carboxylate reductase dimerisation EBA12_06920 PF03807 NADP oxidoreductase coenzyme F420-dependent EBA12_06925 PF01168 Alanine racemase, N-terminal domain EBA12_06935 PF00437 Type II/IV secretion system protein EBA12_06940 PF00437 Type II/IV secretion system protein EBA12_06960 PF00117 Glutamine amidotransferase class-I EBA12_06960 PF03352 Methyladenine glycosylase EBA12_06960 PF00958 GMP synthase C terminal domain EBA12_06960 PF13302 Acetyltransferase (GNAT) domain EBA12_06960 PF13673 Acetyltransferase (GNAT) domain EBA12_06975 PF02622 Uncharacterized ACR, COG1678 EBA12_06980 PF03652 Holliday junction resolvase EBA12_06985 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EBA12_06985 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EBA12_06995 PF02566 OsmC-like protein EBA12_07005 PF02567 Phenazine biosynthesis-like protein EBA12_07015 PF00696 Amino acid kinase family EBA12_07015 PF01842 ACT domain EBA12_07030 PF08245 Mur ligase middle domain EBA12_07045 PF01609 Transposase DDE domain EBA12_07045 PF05598 Transposase domain (DUF772) EBA12_07055 PF00348 Polyprenyl synthetase EBA12_07060 PF00436 Single-strand binding protein family EBA12_07070 PF00990 Diguanylate cyclase, GGDEF domain EBA12_07070 PF01590 GAF domain EBA12_07070 PF00360 Phytochrome region EBA12_07070 PF00563 EAL domain EBA12_07075 PF00698 Acyl transferase domain EBA12_07075 PF02801 Beta-ketoacyl synthase, C-terminal domain EBA12_07075 PF08659 KR domain EBA12_07075 PF00550 Phosphopantetheine attachment site EBA12_07075 PF14765 Polyketide synthase dehydratase EBA12_07075 PF16197 Ketoacyl-synthetase C-terminal extension EBA12_07075 PF09277 Erythronolide synthase, docking EBA12_07075 PF08240 Alcohol dehydrogenase GroES-like domain EBA12_07075 PF08990 Erythronolide synthase docking EBA12_07075 PF00109 Beta-ketoacyl synthase, N-terminal domain EBA12_07115 PF04328 Selenoprotein, putative EBA12_07120 PF02554 Carbon starvation protein CstA EBA12_07120 PF13722 5TM C-terminal transporter carbon starvation CstA EBA12_07125 PF05726 Pirin C-terminal cupin domain EBA12_07125 PF02678 Pirin EBA12_07135 PF04717 Type VI secretion system, phage-baseplate injector EBA12_07175 PF05598 Transposase domain (DUF772) EBA12_07220 PF04493 Endonuclease V EBA12_07225 PF00300 Histidine phosphatase superfamily (branch 1) EBA12_07235 PF01339 CheB methylesterase EBA12_07235 PF00072 Response regulator receiver domain EBA12_07240 PF03705 CheR methyltransferase, all-alpha domain EBA12_07240 PF01739 CheR methyltransferase, SAM binding domain EBA12_07245 PF00563 EAL domain EBA12_07245 PF00990 Diguanylate cyclase, GGDEF domain EBA12_07245 PF13426 PAS domain EBA12_07250 PF01584 CheW-like domain EBA12_07255 PF00672 HAMP domain EBA12_07255 PF02203 Tar ligand binding domain homologue EBA12_07255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA12_07265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_07265 PF09078 CheY binding EBA12_07265 PF02895 Signal transducing histidine kinase, homodimeric domain EBA12_07265 PF01584 CheW-like domain EBA12_07265 PF01627 Hpt domain EBA12_07275 PF17757 UvrB interaction domain EBA12_07275 PF03461 TRCF domain EBA12_07275 PF00271 Helicase conserved C-terminal domain EBA12_07275 PF02559 CarD-like/TRCF domain EBA12_07275 PF00270 DEAD/DEAH box helicase EBA12_07285 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ EBA12_07310 PF00795 Carbon-nitrogen hydrolase EBA12_07320 PF00749 tRNA synthetases class I (E and Q), catalytic domain EBA12_07325 PF01475 Ferric uptake regulator family EBA12_07355 PF13936 Helix-turn-helix domain EBA12_07355 PF00665 Integrase core domain EBA12_07360 PF05598 Transposase domain (DUF772) EBA12_07430 PF08240 Alcohol dehydrogenase GroES-like domain EBA12_07430 PF00107 Zinc-binding dehydrogenase EBA12_07435 PF00654 Voltage gated chloride channel EBA12_07445 PF01609 Transposase DDE domain EBA12_07445 PF05598 Transposase domain (DUF772) EBA12_07450 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EBA12_07450 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EBA12_07495 PF04542 Sigma-70 region 2 EBA12_07495 PF04539 Sigma-70 region 3 EBA12_07495 PF04545 Sigma-70, region 4 EBA12_07500 PF00270 DEAD/DEAH box helicase EBA12_07500 PF00271 Helicase conserved C-terminal domain EBA12_07500 PF03880 DbpA RNA binding domain EBA12_07505 PF08448 PAS fold EBA12_07505 PF00990 Diguanylate cyclase, GGDEF domain EBA12_07505 PF00563 EAL domain EBA12_07510 PF01479 S4 domain EBA12_07510 PF00849 RNA pseudouridylate synthase EBA12_07530 PF03737 Aldolase/RraA EBA12_07535 PF00144 Beta-lactamase EBA12_07540 PF00999 Sodium/hydrogen exchanger family EBA12_07545 PF00672 HAMP domain EBA12_07545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_07545 PF00512 His Kinase A (phospho-acceptor) domain EBA12_07550 PF00072 Response regulator receiver domain EBA12_07550 PF00486 Transcriptional regulatory protein, C terminal EBA12_07555 PF02321 Outer membrane efflux protein EBA12_07570 PF00873 AcrB/AcrD/AcrF family EBA12_07580 PF00664 ABC transporter transmembrane region EBA12_07580 PF00005 ABC transporter EBA12_07605 PF05598 Transposase domain (DUF772) EBA12_07605 PF01609 Transposase DDE domain EBA12_07650 PF00085 Thioredoxin EBA12_07660 PF08264 Anticodon-binding domain of tRNA EBA12_07660 PF13603 Leucyl-tRNA synthetase, Domain 2 EBA12_07660 PF00133 tRNA synthetases class I (I, L, M and V) EBA12_07680 PF01467 Cytidylyltransferase-like EBA12_07700 PF02590 Predicted SPOUT methyltransferase EBA12_07710 PF03544 Gram-negative bacterial TonB protein C-terminal EBA12_07725 PF04402 Protein of unknown function (DUF541) EBA12_07730 PF02545 Maf-like protein EBA12_07735 PF10150 Ribonuclease E/G family EBA12_07735 PF00575 S1 RNA binding domain EBA12_07740 PF13116 Protein of unknown function EBA12_07740 PF13502 AsmA-like C-terminal region EBA12_07750 PF01523 Putative modulator of DNA gyrase EBA12_07755 PF04751 Protein of unknown function (DUF615) EBA12_07760 PF01523 Putative modulator of DNA gyrase EBA12_07775 PF14521 Lysine-specific metallo-endopeptidase EBA12_07785 PF00348 Polyprenyl synthetase EBA12_07790 PF02609 Exonuclease VII small subunit EBA12_07795 PF01171 PP-loop family EBA12_07795 PF09179 TilS substrate binding domain EBA12_07795 PF11734 TilS substrate C-terminal domain EBA12_07800 PF00245 Alkaline phosphatase EBA12_07805 PF00375 Sodium:dicarboxylate symporter family EBA12_07820 PF00877 NlpC/P60 family EBA12_07825 PF00877 NlpC/P60 family EBA12_07830 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EBA12_07835 PF04235 Protein of unknown function (DUF418) EBA12_07840 PF01266 FAD dependent oxidoreductase EBA12_07845 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA12_07845 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EBA12_07870 PF05598 Transposase domain (DUF772) EBA12_07870 PF01609 Transposase DDE domain EBA12_07880 PF00665 Integrase core domain EBA12_07880 PF13936 Helix-turn-helix domain EBA12_07910 PF00665 Integrase core domain EBA12_07910 PF13936 Helix-turn-helix domain EBA12_07915 PF01609 Transposase DDE domain EBA12_07915 PF05598 Transposase domain (DUF772) EBA12_07930 PF10609 NUBPL iron-transfer P-loop NTPase EBA12_07940 PF00692 dUTPase EBA12_07955 PF01609 Transposase DDE domain EBA12_07955 PF05598 Transposase domain (DUF772) EBA12_07970 PF01738 Dienelactone hydrolase family EBA12_07975 PF04055 Radical SAM superfamily EBA12_07975 PF00919 Uncharacterized protein family UPF0004 EBA12_07975 PF18693 TRAM domain EBA12_07985 PF05598 Transposase domain (DUF772) EBA12_07985 PF01609 Transposase DDE domain EBA12_07995 PF03449 Transcription elongation factor, N-terminal EBA12_07995 PF01272 Transcription elongation factor, GreA/GreB, C-term EBA12_08010 PF00665 Integrase core domain EBA12_08010 PF13936 Helix-turn-helix domain EBA12_08020 PF05872 Bacterial protein of unknown function (DUF853) EBA12_08040 PF02666 Phosphatidylserine decarboxylase EBA12_08045 PF02630 SCO1/SenC EBA12_08050 PF05175 Methyltransferase small domain EBA12_08055 PF01264 Chorismate synthase EBA12_08060 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EBA12_08060 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EBA12_08065 PF01118 Semialdehyde dehydrogenase, NAD binding domain EBA12_08065 PF02774 Semialdehyde dehydrogenase, dimerisation domain EBA12_08085 PF01416 tRNA pseudouridine synthase EBA12_08090 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase EBA12_08095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA12_08095 PF03466 LysR substrate binding domain EBA12_08100 PF00291 Pyridoxal-phosphate dependent enzyme EBA12_08110 PF00290 Tryptophan synthase alpha chain EBA12_08120 PF01039 Carboxyl transferase domain EBA12_08120 PF17848 Acetyl-coA carboxylase zinc finger domain EBA12_08125 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EBA12_08125 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EBA12_08125 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EBA12_08125 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EBA12_08140 PF00563 EAL domain EBA12_08140 PF03707 Bacterial signalling protein N terminal repeat EBA12_08140 PF00990 Diguanylate cyclase, GGDEF domain EBA12_08180 PF00121 Triosephosphate isomerase EBA12_08195 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 EBA12_08200 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EBA12_08205 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit EBA12_08210 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit EBA12_08220 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EBA12_08220 PF10531 SLBB domain EBA12_08220 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region EBA12_08225 PF00384 Molybdopterin oxidoreductase EBA12_08225 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal EBA12_08225 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region EBA12_08230 PF00146 NADH dehydrogenase EBA12_08235 PF12838 4Fe-4S dicluster domain EBA12_08240 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 EBA12_08245 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EBA12_08250 PF00361 Proton-conducting membrane transporter EBA12_08250 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EBA12_08255 PF00361 Proton-conducting membrane transporter EBA12_08255 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus EBA12_08260 PF00361 Proton-conducting membrane transporter EBA12_08270 PF17384 RimP C-terminal SH3 domain EBA12_08270 PF02576 RimP N-terminal domain EBA12_08275 PF00575 S1 RNA binding domain EBA12_08275 PF08529 NusA N-terminal domain EBA12_08275 PF13184 NusA-like KH domain EBA12_08280 PF11987 Translation-initiation factor 2 EBA12_08280 PF04760 Translation initiation factor IF-2, N-terminal region EBA12_08280 PF08364 Bacterial translation initiation factor IF-2 associated region EBA12_08280 PF00009 Elongation factor Tu GTP binding domain EBA12_08285 PF02033 Ribosome-binding factor A EBA12_08290 PF09157 Pseudouridine synthase II TruB, C-terminal EBA12_08290 PF16198 tRNA pseudouridylate synthase B C-terminal domain EBA12_08290 PF01509 TruB family pseudouridylate synthase (N terminal domain) EBA12_08295 PF00312 Ribosomal protein S15 EBA12_08300 PF00575 S1 RNA binding domain EBA12_08300 PF03725 3' exoribonuclease family, domain 2 EBA12_08300 PF01138 3' exoribonuclease family, domain 1 EBA12_08300 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain EBA12_08300 PF00013 KH domain EBA12_08310 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain EBA12_08310 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain EBA12_08320 PF00731 AIR carboxylase EBA12_08325 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain EBA12_08325 PF02222 ATP-grasp domain EBA12_08330 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EBA12_08330 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EBA12_08335 PF00462 Glutaredoxin EBA12_08345 PF01914 MarC family integral membrane protein EBA12_08355 PF00593 TonB dependent receptor EBA12_08360 PF01609 Transposase DDE domain EBA12_08360 PF05598 Transposase domain (DUF772) EBA12_08365 PF03641 Possible lysine decarboxylase EBA12_08365 PF11892 Domain of unknown function (DUF3412) EBA12_08365 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases EBA12_08395 PF05567 Neisseria PilC beta-propeller domain EBA12_08410 PF07963 Prokaryotic N-terminal methylation motif EBA12_08410 PF00114 Pilin (bacterial filament) EBA12_08415 PF17757 UvrB interaction domain EBA12_08415 PF12344 Ultra-violet resistance protein B EBA12_08415 PF02151 UvrB/uvrC motif EBA12_08415 PF04851 Type III restriction enzyme, res subunit EBA12_08415 PF00271 Helicase conserved C-terminal domain EBA12_08445 PF03837 RecT family EBA12_08535 PF00145 C-5 cytosine-specific DNA methylase EBA12_08550 PF01555 DNA methylase EBA12_08565 PF07102 Protein of unknown function (DUF1364) EBA12_08850 PF17391 Urocanase N-terminal domain EBA12_08850 PF17392 Urocanase C-terminal domain EBA12_08850 PF01175 Urocanase Rossmann-like domain EBA12_08860 PF00221 Aromatic amino acid lyase EBA12_08865 PF07969 Amidohydrolase family EBA12_08875 PF00392 Bacterial regulatory proteins, gntR family EBA12_08875 PF07702 UTRA domain EBA12_08900 PF01794 Ferric reductase like transmembrane component EBA12_08910 PF00174 Oxidoreductase molybdopterin binding domain EBA12_08915 PF00266 Aminotransferase class-V EBA12_08920 PF01842 ACT domain EBA12_08920 PF01817 Chorismate mutase type II EBA12_08920 PF00800 Prephenate dehydratase EBA12_08925 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EBA12_08950 PF05598 Transposase domain (DUF772) EBA12_08950 PF01609 Transposase DDE domain EBA12_08955 PF03544 Gram-negative bacterial TonB protein C-terminal EBA12_08960 PF02403 Seryl-tRNA synthetase N-terminal domain EBA12_08960 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EBA12_08970 PF02525 Flavodoxin-like fold EBA12_08975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA12_08975 PF03466 LysR substrate binding domain EBA12_08990 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin EBA12_09010 PF03377 TAL effector repeat EBA12_09030 PF02203 Tar ligand binding domain homologue EBA12_09030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA12_09030 PF00672 HAMP domain EBA12_09050 PF00672 HAMP domain EBA12_09050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_09050 PF01627 Hpt domain EBA12_09050 PF00512 His Kinase A (phospho-acceptor) domain EBA12_09050 PF00072 Response regulator receiver domain EBA12_09050 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EBA12_09055 PF06745 KaiC EBA12_09060 PF13426 PAS domain EBA12_09060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_09060 PF00072 Response regulator receiver domain EBA12_09070 PF03918 Cytochrome C biogenesis protein EBA12_09075 PF08534 Redoxin EBA12_09080 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal EBA12_09080 PF01578 Cytochrome C assembly protein EBA12_09085 PF03100 CcmE EBA12_09090 PF04995 Heme exporter protein D (CcmD) EBA12_09095 PF01578 Cytochrome C assembly protein EBA12_09100 PF00082 Subtilase family EBA12_09110 PF04542 Sigma-70 region 2 EBA12_09110 PF08281 Sigma-70, region 4 EBA12_09120 PF00034 Cytochrome c EBA12_09135 PF05523 WxcM-like, C-terminal EBA12_09155 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EBA12_09160 PF01943 Polysaccharide biosynthesis protein EBA12_09165 PF00535 Glycosyl transferase family 2 EBA12_09200 PF00534 Glycosyl transferases group 1 EBA12_09200 PF13579 Glycosyl transferase 4-like domain EBA12_09215 PF06745 KaiC EBA12_09220 PF00664 ABC transporter transmembrane region EBA12_09220 PF00005 ABC transporter EBA12_09230 PF07690 Major Facilitator Superfamily EBA12_09250 PF00296 Luciferase-like monooxygenase EBA12_09265 PF00571 CBS domain EBA12_09265 PF03471 Transporter associated domain EBA12_09265 PF01595 Cyclin M transmembrane N-terminal domain EBA12_09280 PF01384 Phosphate transporter family EBA12_09300 PF00204 DNA gyrase B EBA12_09300 PF01751 Toprim domain EBA12_09300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_09300 PF00986 DNA gyrase B subunit, carboxyl terminus EBA12_09310 PF06418 CTP synthase N-terminus EBA12_09310 PF00117 Glutamine amidotransferase class-I EBA12_09315 PF00793 DAHP synthetase I family EBA12_09320 PF00113 Enolase, C-terminal TIM barrel domain EBA12_09320 PF03952 Enolase, N-terminal domain EBA12_09325 PF04977 Septum formation initiator EBA12_09330 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EBA12_09340 PF02542 YgbB family EBA12_09345 PF01142 tRNA pseudouridine synthase D (TruD) EBA12_09350 PF01713 Smr domain EBA12_09355 PF01975 Survival protein SurE EBA12_09365 PF09335 SNARE associated Golgi protein EBA12_09370 PF01476 LysM domain EBA12_09370 PF01551 Peptidase family M23 EBA12_09380 PF01985 CRS1 / YhbY (CRM) domain EBA12_09385 PF01728 FtsJ-like methyltransferase EBA12_09390 PF00004 ATPase family associated with various cellular activities (AAA) EBA12_09390 PF06480 FtsH Extracellular EBA12_09390 PF17862 AAA+ lid domain EBA12_09390 PF01434 Peptidase family M41 EBA12_09395 PF00809 Pterin binding enzyme EBA12_09405 PF17209 Hfq protein EBA12_09410 PF13167 GTP-binding GTPase N-terminal EBA12_09410 PF16360 GTP-binding GTPase Middle Region EBA12_09410 PF01926 50S ribosome-binding GTPase EBA12_09415 PF02464 Competence-damaged protein EBA12_09420 PF03109 ABC1 family EBA12_09425 PF01726 LexA DNA binding domain EBA12_09425 PF00717 Peptidase S24-like EBA12_09430 PF00154 recA bacterial DNA recombination protein EBA12_09440 PF02631 RecX family EBA12_09445 PF01411 tRNA synthetases class II (A) EBA12_09445 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EBA12_09445 PF02272 DHHA1 domain EBA12_09450 PF02599 Global regulator protein family EBA12_09505 PF02678 Pirin EBA12_09505 PF17954 Quercetinase C-terminal cupin domain EBA12_09510 PF03466 LysR substrate binding domain EBA12_09510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA12_09535 PF08543 Phosphomethylpyrimidine kinase EBA12_09535 PF02581 Thiamine monophosphate synthase EBA12_09545 PF02562 PhoH-like protein EBA12_09545 PF13638 PIN domain EBA12_09550 PF00578 AhpC/TSA family EBA12_09565 PF00701 Dihydrodipicolinate synthetase family EBA12_09575 PF11953 Domain of unknown function (DUF3470) EBA12_09575 PF00037 4Fe-4S binding domain EBA12_09580 PF05035 2-keto-3-deoxy-galactonokinase EBA12_09585 PF08450 SMP-30/Gluconolactonase/LRE-like region EBA12_09590 PF13378 Enolase C-terminal domain-like EBA12_09590 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EBA12_09595 PF01081 KDPG and KHG aldolase EBA12_09600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA12_09600 PF03466 LysR substrate binding domain EBA12_09620 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EBA12_09620 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EBA12_09630 PF00083 Sugar (and other) transporter EBA12_09650 PF01520 N-acetylmuramoyl-L-alanine amidase EBA12_09655 PF02649 Type I GTP cyclohydrolase folE2 EBA12_09665 PF01743 Poly A polymerase head domain EBA12_09665 PF12626 Polymerase A arginine-rich C-terminus EBA12_09665 PF12627 Probable RNA and SrmB- binding site of polymerase A EBA12_09670 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EBA12_09675 PF02548 Ketopantoate hydroxymethyltransferase EBA12_09680 PF02569 Pantoate-beta-alanine ligase EBA12_09685 PF02261 Aspartate decarboxylase EBA12_09690 PF00342 Phosphoglucose isomerase EBA12_09715 PF00933 Glycosyl hydrolase family 3 N terminal domain EBA12_09715 PF01915 Glycosyl hydrolase family 3 C-terminal domain EBA12_09715 PF14310 Fibronectin type III-like domain EBA12_09725 PF00474 Sodium:solute symporter family EBA12_09735 PF00563 EAL domain EBA12_09735 PF01590 GAF domain EBA12_09735 PF00990 Diguanylate cyclase, GGDEF domain EBA12_09735 PF00360 Phytochrome region EBA12_09745 PF00150 Cellulase (glycosyl hydrolase family 5) EBA12_09745 PF02013 Cellulose or protein binding domain EBA12_09755 PF00072 Response regulator receiver domain EBA12_09765 PF04551 GcpE protein EBA12_09770 PF01569 PAP2 superfamily EBA12_09780 PF07690 Major Facilitator Superfamily EBA12_09790 PF01177 Asp/Glu/Hydantoin racemase EBA12_09800 PF00892 EamA-like transporter family EBA12_09805 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EBA12_09805 PF01565 FAD binding domain EBA12_09810 PF01180 Dihydroorotate dehydrogenase EBA12_09830 PF00171 Aldehyde dehydrogenase family EBA12_09865 PF00742 Homoserine dehydrogenase EBA12_09865 PF03447 Homoserine dehydrogenase, NAD binding domain EBA12_09865 PF13840 ACT domain EBA12_09865 PF01842 ACT domain EBA12_09865 PF00696 Amino acid kinase family EBA12_09870 PF08544 GHMP kinases C terminal EBA12_09870 PF00288 GHMP kinases N terminal domain EBA12_09875 PF07519 Tannase and feruloyl esterase EBA12_09890 PF00291 Pyridoxal-phosphate dependent enzyme EBA12_09890 PF14821 Threonine synthase N terminus EBA12_09905 PF13393 Histidyl-tRNA synthetase EBA12_09905 PF03129 Anticodon binding domain EBA12_09925 PF01634 ATP phosphoribosyltransferase EBA12_09925 PF08029 HisG, C-terminal domain EBA12_09930 PF00815 Histidinol dehydrogenase EBA12_09935 PF00155 Aminotransferase class I and II EBA12_09940 PF00475 Imidazoleglycerol-phosphate dehydratase EBA12_09945 PF00117 Glutamine amidotransferase class-I EBA12_09950 PF00977 Histidine biosynthesis protein EBA12_09955 PF00977 Histidine biosynthesis protein EBA12_09960 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase EBA12_09960 PF01502 Phosphoribosyl-AMP cyclohydrolase EBA12_09985 PF03079 ARD/ARD' family EBA12_09990 PF00596 Class II Aldolase and Adducin N-terminal domain EBA12_09995 PF13520 Amino acid permease EBA12_10000 PF13520 Amino acid permease EBA12_10010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EBA12_10010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EBA12_10015 PF01565 FAD binding domain EBA12_10015 PF02913 FAD linked oxidases, C-terminal domain EBA12_10040 PF01132 Elongation factor P (EF-P) OB domain EBA12_10040 PF08207 Elongation factor P (EF-P) KOW-like domain EBA12_10040 PF09285 Elongation factor P, C-terminal EBA12_10045 PF00106 short chain dehydrogenase EBA12_10050 PF00682 HMGL-like EBA12_10060 PF00378 Enoyl-CoA hydratase/isomerase EBA12_10070 PF07670 Nucleoside recognition EBA12_10070 PF02421 Ferrous iron transport protein B EBA12_10070 PF07664 Ferrous iron transport protein B C terminus EBA12_10095 PF00155 Aminotransferase class I and II EBA12_10100 PF03473 MOSC domain EBA12_10100 PF03475 3-alpha domain EBA12_10105 PF05173 Dihydrodipicolinate reductase, C-terminus EBA12_10105 PF01113 Dihydrodipicolinate reductase, N-terminus EBA12_10110 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EBA12_10110 PF00117 Glutamine amidotransferase class-I EBA12_10120 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EBA12_10120 PF02142 MGS-like domain EBA12_10120 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EBA12_10125 PF01272 Transcription elongation factor, GreA/GreB, C-term EBA12_10125 PF03449 Transcription elongation factor, N-terminal EBA12_10135 PF17768 RecJ OB domain EBA12_10135 PF02272 DHHA1 domain EBA12_10135 PF01368 DHH family EBA12_10150 PF04397 LytTr DNA-binding domain EBA12_10150 PF00072 Response regulator receiver domain EBA12_10160 PF01336 OB-fold nucleic acid binding domain EBA12_10160 PF00152 tRNA synthetases class II (D, K and N) EBA12_10165 PF00072 Response regulator receiver domain EBA12_10175 PF00512 His Kinase A (phospho-acceptor) domain EBA12_10175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_10175 PF00072 Response regulator receiver domain EBA12_10175 PF01627 Hpt domain EBA12_10180 PF00378 Enoyl-CoA hydratase/isomerase EBA12_10185 PF00501 AMP-binding enzyme EBA12_10185 PF13193 AMP-binding enzyme C-terminal domain EBA12_10195 PF00330 Aconitase family (aconitate hydratase) EBA12_10195 PF00694 Aconitase C-terminal domain EBA12_10210 PF00330 Aconitase family (aconitate hydratase) EBA12_10210 PF11791 Aconitate B N-terminal domain EBA12_10210 PF06434 Aconitate hydratase 2 N-terminus EBA12_10215 PF00561 alpha/beta hydrolase fold EBA12_10225 PF03707 Bacterial signalling protein N terminal repeat EBA12_10225 PF00563 EAL domain EBA12_10225 PF00990 Diguanylate cyclase, GGDEF domain EBA12_10230 PF01339 CheB methylesterase EBA12_10230 PF00072 Response regulator receiver domain EBA12_10235 PF03975 CheD chemotactic sensory transduction EBA12_10240 PF03705 CheR methyltransferase, all-alpha domain EBA12_10240 PF01739 CheR methyltransferase, SAM binding domain EBA12_10245 PF00672 HAMP domain EBA12_10245 PF02203 Tar ligand binding domain homologue EBA12_10245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA12_10255 PF01584 CheW-like domain EBA12_10260 PF07238 PilZ domain EBA12_10260 PF07317 Flagellar regulator YcgR EBA12_10270 PF02203 Tar ligand binding domain homologue EBA12_10270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA12_10270 PF00672 HAMP domain EBA12_10275 PF00672 HAMP domain EBA12_10275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA12_10275 PF02203 Tar ligand binding domain homologue EBA12_10280 PF02203 Tar ligand binding domain homologue EBA12_10280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA12_10280 PF00672 HAMP domain EBA12_10295 PF02203 Tar ligand binding domain homologue EBA12_10295 PF00672 HAMP domain EBA12_10295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA12_10300 PF05598 Transposase domain (DUF772) EBA12_10305 PF02203 Tar ligand binding domain homologue EBA12_10305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA12_10305 PF00672 HAMP domain EBA12_10310 PF00672 HAMP domain EBA12_10310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA12_10310 PF02203 Tar ligand binding domain homologue EBA12_10340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA12_10340 PF00672 HAMP domain EBA12_10340 PF02203 Tar ligand binding domain homologue EBA12_10345 PF00665 Integrase core domain EBA12_10345 PF13936 Helix-turn-helix domain EBA12_10360 PF01584 CheW-like domain EBA12_10360 PF01627 Hpt domain EBA12_10360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_10360 PF09078 CheY binding EBA12_10360 PF02895 Signal transducing histidine kinase, homodimeric domain EBA12_10365 PF00072 Response regulator receiver domain EBA12_10375 PF01584 CheW-like domain EBA12_10380 PF13614 AAA domain EBA12_10385 PF00691 OmpA family EBA12_10385 PF13677 Membrane MotB of proton-channel complex MotA/MotB EBA12_10390 PF01618 MotA/TolQ/ExbB proton channel family EBA12_10410 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EBA12_10410 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EBA12_10425 PF07715 TonB-dependent Receptor Plug Domain EBA12_10425 PF00593 TonB dependent receptor EBA12_10445 PF17728 BsuBI/PstI restriction endonuclease HTH domain EBA12_10445 PF06616 BsuBI/PstI restriction endonuclease domain EBA12_10450 PF01609 Transposase DDE domain EBA12_10450 PF05598 Transposase domain (DUF772) EBA12_10495 PF05598 Transposase domain (DUF772) EBA12_10505 PF05598 Transposase domain (DUF772) EBA12_10515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_10515 PF02895 Signal transducing histidine kinase, homodimeric domain EBA12_10515 PF01627 Hpt domain EBA12_10515 PF01584 CheW-like domain EBA12_10515 PF07194 P2 response regulator binding domain EBA12_10520 PF04344 Chemotaxis phosphatase, CheZ EBA12_10525 PF00072 Response regulator receiver domain EBA12_10530 PF04539 Sigma-70 region 3 EBA12_10530 PF04545 Sigma-70, region 4 EBA12_10530 PF04542 Sigma-70 region 2 EBA12_10535 PF10609 NUBPL iron-transfer P-loop NTPase EBA12_10540 PF00448 SRP54-type protein, GTPase domain EBA12_10545 PF00771 FHIPEP family EBA12_10550 PF01312 FlhB HrpN YscU SpaS Family EBA12_10555 PF00563 EAL domain EBA12_10555 PF00990 Diguanylate cyclase, GGDEF domain EBA12_10555 PF03707 Bacterial signalling protein N terminal repeat EBA12_10560 PF00990 Diguanylate cyclase, GGDEF domain EBA12_10560 PF00563 EAL domain EBA12_10560 PF13188 PAS domain EBA12_10560 PF03707 Bacterial signalling protein N terminal repeat EBA12_10565 PF00563 EAL domain EBA12_10565 PF13188 PAS domain EBA12_10565 PF03707 Bacterial signalling protein N terminal repeat EBA12_10565 PF00990 Diguanylate cyclase, GGDEF domain EBA12_10570 PF01311 Bacterial export proteins, family 1 EBA12_10575 PF01313 Bacterial export proteins, family 3 EBA12_10580 PF00813 FliP family EBA12_10585 PF04347 Flagellar biosynthesis protein, FliO EBA12_10590 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EBA12_10595 PF02154 Flagellar motor switch protein FliM EBA12_10595 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EBA12_10615 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EBA12_10615 PF18269 T3SS EscN ATPase C-terminal domain EBA12_10625 PF14841 FliG middle domain EBA12_10625 PF14842 FliG N-terminal domain EBA12_10625 PF01706 FliG C-terminal domain EBA12_10630 PF01514 Secretory protein of YscJ/FliF family EBA12_10630 PF08345 Flagellar M-ring protein C-terminal EBA12_10635 PF02049 Flagellar hook-basal body complex protein FliE EBA12_10645 PF00534 Glycosyl transferases group 1 EBA12_10645 PF00535 Glycosyl transferase family 2 EBA12_10680 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EBA12_10680 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EBA12_10690 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EBA12_10695 PF00158 Sigma-54 interaction domain EBA12_10695 PF02954 Bacterial regulatory protein, Fis family EBA12_10695 PF00072 Response regulator receiver domain EBA12_10700 PF01339 CheB methylesterase EBA12_10700 PF00072 Response regulator receiver domain EBA12_10705 PF00309 Sigma-54 factor, Activator interacting domain (AID) EBA12_10705 PF04963 Sigma-54 factor, core binding domain EBA12_10705 PF04552 Sigma-54, DNA binding domain EBA12_10710 PF00072 Response regulator receiver domain EBA12_10710 PF00196 Bacterial regulatory proteins, luxR family EBA12_10725 PF02561 Flagellar protein FliS EBA12_10730 PF07196 Flagellin hook IN motif EBA12_10730 PF02465 Flagellar hook-associated protein 2 N-terminus EBA12_10730 PF07195 Flagellar hook-associated protein 2 C-terminus EBA12_10735 PF00700 Bacterial flagellin C-terminal helical region EBA12_10735 PF00669 Bacterial flagellin N-terminal helical region EBA12_10745 PF07196 Flagellin hook IN motif EBA12_10745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EBA12_10750 PF10135 Rod binding protein EBA12_10750 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EBA12_10755 PF02119 Flagellar P-ring protein EBA12_10760 PF02107 Flagellar L-ring protein EBA12_10765 PF00460 Flagella basal body rod protein EBA12_10765 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EBA12_10775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EBA12_10775 PF00460 Flagella basal body rod protein EBA12_10780 PF00460 Flagella basal body rod protein EBA12_10780 PF07559 Flagellar basal body protein FlaE EBA12_10780 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EBA12_10785 PF03963 Flagellar hook capping protein - N-terminal region EBA12_10790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EBA12_10790 PF00460 Flagella basal body rod protein EBA12_10800 PF00072 Response regulator receiver domain EBA12_10800 PF01584 CheW-like domain EBA12_10820 PF00512 His Kinase A (phospho-acceptor) domain EBA12_10820 PF13426 PAS domain EBA12_10820 PF00989 PAS fold EBA12_10820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_10820 PF13188 PAS domain EBA12_10825 PF00990 Diguanylate cyclase, GGDEF domain EBA12_10825 PF00563 EAL domain EBA12_10825 PF03707 Bacterial signalling protein N terminal repeat EBA12_10830 PF07730 Histidine kinase EBA12_10830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_10835 PF00563 EAL domain EBA12_10835 PF00990 Diguanylate cyclase, GGDEF domain EBA12_10835 PF03707 Bacterial signalling protein N terminal repeat EBA12_10855 PF12729 Four helix bundle sensory module for signal transduction EBA12_10855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA12_10855 PF00672 HAMP domain EBA12_10860 PF04356 Protein of unknown function (DUF489) EBA12_10870 PF00293 NUDIX domain EBA12_10875 PF02617 ATP-dependent Clp protease adaptor protein ClpS EBA12_10880 PF10431 C-terminal, D2-small domain, of ClpB protein EBA12_10880 PF17871 AAA lid domain EBA12_10880 PF07724 AAA domain (Cdc48 subfamily) EBA12_10880 PF00004 ATPase family associated with various cellular activities (AAA) EBA12_10880 PF02861 Clp amino terminal domain, pathogenicity island component EBA12_10885 PF01176 Translation initiation factor 1A / IF-1 EBA12_10890 PF03588 Leucyl/phenylalanyl-tRNA protein transferase EBA12_10905 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA12_10910 PF01580 FtsK/SpoIIIE family EBA12_10910 PF17854 FtsK alpha domain EBA12_10910 PF13491 4TM region of DNA translocase FtsK/SpoIIIE EBA12_10910 PF09397 Ftsk gamma domain EBA12_10920 PF03548 Outer membrane lipoprotein carrier protein LolA EBA12_10935 PF16193 AAA C-terminal domain EBA12_10935 PF00004 ATPase family associated with various cellular activities (AAA) EBA12_10935 PF12002 MgsA AAA+ ATPase C terminal EBA12_10945 PF02537 CrcB-like protein, Camphor Resistance (CrcB) EBA12_10955 PF00654 Voltage gated chloride channel EBA12_10960 PF02803 Thiolase, C-terminal domain EBA12_10960 PF00108 Thiolase, N-terminal domain EBA12_10965 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EBA12_10965 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EBA12_10965 PF00378 Enoyl-CoA hydratase/isomerase EBA12_10975 PF00334 Nucleoside diphosphate kinase EBA12_10980 PF04055 Radical SAM superfamily EBA12_10990 PF13464 Domain of unknown function (DUF4115) EBA12_11000 PF01011 PQQ enzyme repeat EBA12_11000 PF13360 PQQ-like domain EBA12_11005 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EBA12_11005 PF01926 50S ribosome-binding GTPase EBA12_11010 PF00994 Probable molybdopterin binding domain EBA12_11010 PF03454 MoeA C-terminal region (domain IV) EBA12_11010 PF03453 MoeA N-terminal region (domain I and II) EBA12_11020 PF00899 ThiF family EBA12_11030 PF13936 Helix-turn-helix domain EBA12_11030 PF00665 Integrase core domain EBA12_11050 PF03453 MoeA N-terminal region (domain I and II) EBA12_11050 PF03454 MoeA C-terminal region (domain IV) EBA12_11050 PF00994 Probable molybdopterin binding domain EBA12_11055 PF12804 MobA-like NTP transferase domain EBA12_11080 PF10414 Sirohaem synthase dimerisation region EBA12_11080 PF14824 Sirohaem biosynthesis protein central EBA12_11080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EBA12_11120 PF05598 Transposase domain (DUF772) EBA12_11120 PF01609 Transposase DDE domain EBA12_11145 PF00563 EAL domain EBA12_11145 PF08447 PAS fold EBA12_11145 PF08448 PAS fold EBA12_11145 PF00990 Diguanylate cyclase, GGDEF domain EBA12_11155 PF05598 Transposase domain (DUF772) EBA12_11165 PF00072 Response regulator receiver domain EBA12_11165 PF00196 Bacterial regulatory proteins, luxR family EBA12_11170 PF13426 PAS domain EBA12_11170 PF00512 His Kinase A (phospho-acceptor) domain EBA12_11170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_11170 PF00072 Response regulator receiver domain EBA12_11170 PF08448 PAS fold EBA12_11180 PF00873 AcrB/AcrD/AcrF family EBA12_11185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EBA12_11195 PF00082 Subtilase family EBA12_11195 PF03797 Autotransporter beta-domain EBA12_11205 PF04717 Type VI secretion system, phage-baseplate injector EBA12_11205 PF16671 Actin cross-linking domain EBA12_11210 PF03377 TAL effector repeat EBA12_11215 PF03377 TAL effector repeat EBA12_11220 PF03377 TAL effector repeat EBA12_11240 PF00550 Phosphopantetheine attachment site EBA12_11240 PF00975 Thioesterase domain EBA12_11240 PF00501 AMP-binding enzyme EBA12_11240 PF13193 AMP-binding enzyme C-terminal domain EBA12_11240 PF00668 Condensation domain EBA12_11245 PF13340 Putative transposase of IS4/5 family (DUF4096) EBA12_11250 PF00501 AMP-binding enzyme EBA12_11250 PF13193 AMP-binding enzyme C-terminal domain EBA12_11250 PF00668 Condensation domain EBA12_11250 PF00550 Phosphopantetheine attachment site EBA12_11255 PF00550 Phosphopantetheine attachment site EBA12_11255 PF00668 Condensation domain EBA12_11255 PF00501 AMP-binding enzyme EBA12_11255 PF13193 AMP-binding enzyme C-terminal domain EBA12_11260 PF13193 AMP-binding enzyme C-terminal domain EBA12_11260 PF00501 AMP-binding enzyme EBA12_11260 PF00668 Condensation domain EBA12_11260 PF00550 Phosphopantetheine attachment site EBA12_11265 PF00550 Phosphopantetheine attachment site EBA12_11265 PF00501 AMP-binding enzyme EBA12_11265 PF13193 AMP-binding enzyme C-terminal domain EBA12_11265 PF00668 Condensation domain EBA12_11265 PF00975 Thioesterase domain EBA12_11270 PF00550 Phosphopantetheine attachment site EBA12_11270 PF00668 Condensation domain EBA12_11270 PF00975 Thioesterase domain EBA12_11270 PF13193 AMP-binding enzyme C-terminal domain EBA12_11270 PF00501 AMP-binding enzyme EBA12_11275 PF00501 AMP-binding enzyme EBA12_11275 PF00550 Phosphopantetheine attachment site EBA12_11275 PF13193 AMP-binding enzyme C-terminal domain EBA12_11275 PF00975 Thioesterase domain EBA12_11275 PF00550 Phosphopantetheine attachment site EBA12_11275 PF00668 Condensation domain EBA12_11275 PF00975 Thioesterase domain EBA12_11275 PF13193 AMP-binding enzyme C-terminal domain EBA12_11275 PF00501 AMP-binding enzyme EBA12_11275 PF00668 Condensation domain EBA12_11285 PF02797 Chalcone and stilbene synthases, C-terminal domain EBA12_11285 PF00195 Chalcone and stilbene synthases, N-terminal domain EBA12_11295 PF00378 Enoyl-CoA hydratase/isomerase EBA12_11300 PF00155 Aminotransferase class I and II EBA12_11305 PF00378 Enoyl-CoA hydratase/isomerase EBA12_11310 PF00664 ABC transporter transmembrane region EBA12_11310 PF00005 ABC transporter EBA12_11315 PF03621 MbtH-like protein EBA12_11320 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain EBA12_11320 PF12706 Beta-lactamase superfamily domain EBA12_11365 PF02303 Helix-destabilising protein EBA12_11375 PF17091 Inovirus G7P protein EBA12_11430 PF00873 AcrB/AcrD/AcrF family EBA12_11435 PF00529 HlyD membrane-fusion protein of T1SS EBA12_11435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EBA12_11485 PF00486 Transcriptional regulatory protein, C terminal EBA12_11485 PF00072 Response regulator receiver domain EBA12_11490 PF00034 Cytochrome c EBA12_11490 PF03150 Di-haem cytochrome c peroxidase EBA12_11495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_11495 PF00512 His Kinase A (phospho-acceptor) domain EBA12_11500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA12_11500 PF03466 LysR substrate binding domain EBA12_11520 PF00069 Protein kinase domain EBA12_11560 PF16671 Actin cross-linking domain EBA12_11560 PF04717 Type VI secretion system, phage-baseplate injector EBA12_11585 PF13936 Helix-turn-helix domain EBA12_11585 PF00665 Integrase core domain EBA12_11600 PF05598 Transposase domain (DUF772) EBA12_11600 PF01609 Transposase DDE domain EBA12_11610 PF17871 AAA lid domain EBA12_11610 PF10431 C-terminal, D2-small domain, of ClpB protein EBA12_11610 PF00004 ATPase family associated with various cellular activities (AAA) EBA12_11610 PF07724 AAA domain (Cdc48 subfamily) EBA12_11635 PF05638 Type VI secretion system effector, Hcp EBA12_11685 PF01609 Transposase DDE domain EBA12_11685 PF05598 Transposase domain (DUF772) EBA12_11695 PF01106 NifU-like domain EBA12_11700 PF01329 Pterin 4 alpha carbinolamine dehydratase EBA12_11715 PF11737 Protein of unknown function (DUF3300) EBA12_11720 PF00849 RNA pseudouridylate synthase EBA12_11720 PF01479 S4 domain EBA12_11725 PF00575 S1 RNA binding domain EBA12_11725 PF12111 Polyribonucleotide phosphorylase C terminal EBA12_11725 PF10150 Ribonuclease E/G family EBA12_11735 PF00072 Response regulator receiver domain EBA12_11735 PF00196 Bacterial regulatory proteins, luxR family EBA12_11750 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EBA12_11760 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EBA12_11760 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EBA12_11760 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EBA12_11770 PF01648 4'-phosphopantetheinyl transferase superfamily EBA12_11770 PF17837 4'-phosphopantetheinyl transferase N-terminal domain EBA12_11795 PF01066 CDP-alcohol phosphatidyltransferase EBA12_11800 PF08459 UvrC Helix-hairpin-helix N-terminal EBA12_11800 PF02151 UvrB/uvrC motif EBA12_11800 PF01541 GIY-YIG catalytic domain EBA12_11810 PF01451 Low molecular weight phosphotyrosine protein phosphatase EBA12_11815 PF02348 Cytidylyltransferase EBA12_11820 PF02606 Tetraacyldisaccharide-1-P 4'-kinase EBA12_11825 PF00005 ABC transporter EBA12_11825 PF00664 ABC transporter transmembrane region EBA12_11835 PF01618 MotA/TolQ/ExbB proton channel family EBA12_11840 PF00753 Metallo-beta-lactamase superfamily EBA12_11840 PF03772 Competence protein EBA12_11855 PF00005 ABC transporter EBA12_11860 PF12704 MacB-like periplasmic core domain EBA12_11860 PF02687 FtsX-like permease family EBA12_11870 PF03937 Flavinator of succinate dehydrogenase EBA12_11875 PF13085 2Fe-2S iron-sulfur cluster binding domain EBA12_11885 PF02910 Fumarate reductase flavoprotein C-term EBA12_11885 PF00890 FAD binding domain EBA12_11890 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EBA12_11895 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EBA12_11905 PF01571 Aminomethyltransferase folate-binding domain EBA12_11915 PF00005 ABC transporter EBA12_11915 PF17912 MalK OB fold domain EBA12_11920 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EBA12_11920 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EBA12_11925 PF02685 Glucokinase EBA12_11930 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EBA12_11935 PF00920 Dehydratase family EBA12_11940 PF01081 KDPG and KHG aldolase EBA12_11975 PF00034 Cytochrome c EBA12_12020 PF00512 His Kinase A (phospho-acceptor) domain EBA12_12020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_12020 PF00072 Response regulator receiver domain EBA12_12020 PF09308 LuxQ, periplasmic EBA12_12035 PF00575 S1 RNA binding domain EBA12_12035 PF17674 HHH domain EBA12_12035 PF16921 Tex protein YqgF-like domain EBA12_12035 PF09371 Tex-like protein N-terminal domain EBA12_12045 PF00355 Rieske [2Fe-2S] domain EBA12_12045 PF01266 FAD dependent oxidoreductase EBA12_12060 PF00561 alpha/beta hydrolase fold EBA12_12070 PF01066 CDP-alcohol phosphatidyltransferase EBA12_12090 PF03618 Kinase/pyrophosphorylase EBA12_12095 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain EBA12_12095 PF02896 PEP-utilising enzyme, TIM barrel domain EBA12_12095 PF00391 PEP-utilising enzyme, mobile domain EBA12_12100 PF05552 Conserved TM helix EBA12_12100 PF00924 Mechanosensitive ion channel EBA12_12105 PF00929 Exonuclease EBA12_12110 PF14437 MafB19-like deaminase EBA12_12115 PF02742 Iron dependent repressor, metal binding and dimerisation domain EBA12_12115 PF01325 Iron dependent repressor, N-terminal DNA binding domain EBA12_12120 PF01566 Natural resistance-associated macrophage protein EBA12_12150 PF03466 LysR substrate binding domain EBA12_12150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA12_12155 PF03601 Conserved hypothetical protein 698 EBA12_12175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA12_12175 PF03466 LysR substrate binding domain EBA12_12180 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EBA12_12180 PF00361 Proton-conducting membrane transporter EBA12_12180 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus EBA12_12185 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) EBA12_12190 PF00117 Glutamine amidotransferase class-I EBA12_12190 PF00958 GMP synthase C terminal domain EBA12_12190 PF02540 NAD synthase EBA12_12195 PF00478 IMP dehydrogenase / GMP reductase domain EBA12_12195 PF00571 CBS domain EBA12_12200 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EBA12_12200 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EBA12_12215 PF00483 Nucleotidyl transferase EBA12_12220 PF02719 Polysaccharide biosynthesis protein EBA12_12225 PF00953 Glycosyl transferase family 4 EBA12_12230 PF18073 Rubredoxin metal binding domain EBA12_12240 PF00216 Bacterial DNA-binding protein EBA12_12245 PF00575 S1 RNA binding domain EBA12_12250 PF02224 Cytidylate kinase EBA12_12255 PF00444 Ribosomal protein L36 EBA12_12265 PF04371 Porphyromonas-type peptidyl-arginine deiminase EBA12_12275 PF00795 Carbon-nitrogen hydrolase EBA12_12300 PF00528 Binding-protein-dependent transport system inner membrane component EBA12_12305 PF00528 Binding-protein-dependent transport system inner membrane component EBA12_12325 PF00356 Bacterial regulatory proteins, lacI family EBA12_12335 PF03795 YCII-related domain EBA12_12340 PF02616 Segregation and condensation protein ScpA EBA12_12345 PF04079 Segregation and condensation complex subunit ScpB EBA12_12350 PF01479 S4 domain EBA12_12350 PF00849 RNA pseudouridylate synthase EBA12_12365 PF00795 Carbon-nitrogen hydrolase EBA12_12370 PF00155 Aminotransferase class I and II EBA12_12375 PF00005 ABC transporter EBA12_12380 PF03379 CcmB protein EBA12_12385 PF01578 Cytochrome C assembly protein EBA12_12395 PF03100 CcmE EBA12_12400 PF01578 Cytochrome C assembly protein EBA12_12400 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal EBA12_12405 PF08534 Redoxin EBA12_12410 PF03918 Cytochrome C biogenesis protein EBA12_12420 PF00561 alpha/beta hydrolase fold EBA12_12425 PF00313 'Cold-shock' DNA-binding domain EBA12_12435 PF00005 ABC transporter EBA12_12435 PF00664 ABC transporter transmembrane region EBA12_12440 PF00664 ABC transporter transmembrane region EBA12_12440 PF00005 ABC transporter EBA12_12450 PF01654 Cytochrome bd terminal oxidase subunit I EBA12_12480 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain EBA12_12480 PF02129 X-Pro dipeptidyl-peptidase (S15 family) EBA12_12485 PF00171 Aldehyde dehydrogenase family EBA12_12490 PF01472 PUA domain EBA12_12490 PF00696 Amino acid kinase family EBA12_12505 PF00206 Lyase EBA12_12510 PF01118 Semialdehyde dehydrogenase, NAD binding domain EBA12_12520 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase EBA12_12520 PF00696 Amino acid kinase family EBA12_12525 PF01546 Peptidase family M20/M25/M40 EBA12_12525 PF07687 Peptidase dimerisation domain EBA12_12530 PF00764 Arginosuccinate synthase EBA12_12535 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EBA12_12535 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EBA12_12545 PF09190 DALR domain EBA12_12545 PF01406 tRNA synthetases class I (C) catalytic domain EBA12_12550 PF02657 Fe-S metabolism associated domain EBA12_12565 PF01258 Prokaryotic dksA/traR C4-type zinc finger EBA12_12570 PF01809 Putative membrane protein insertion efficiency factor EBA12_12575 PF01979 Amidohydrolase family EBA12_12580 PF08460 Bacterial SH3 domain EBA12_12580 PF01551 Peptidase family M23 EBA12_12590 PF05985 Ethanolamine ammonia-lyase light chain (EutC) EBA12_12605 PF01095 Pectinesterase EBA12_12615 PF00295 Glycosyl hydrolases family 28 EBA12_12630 PF13419 Haloacid dehalogenase-like hydrolase EBA12_12640 PF01979 Amidohydrolase family EBA12_12655 PF01132 Elongation factor P (EF-P) OB domain EBA12_12655 PF08207 Elongation factor P (EF-P) KOW-like domain EBA12_12655 PF09285 Elongation factor P, C-terminal EBA12_12660 PF04055 Radical SAM superfamily EBA12_12665 PF13188 PAS domain EBA12_12665 PF03707 Bacterial signalling protein N terminal repeat EBA12_12665 PF00990 Diguanylate cyclase, GGDEF domain EBA12_12665 PF00563 EAL domain EBA12_12675 PF00588 SpoU rRNA Methylase family EBA12_12680 PF00459 Inositol monophosphatase family EBA12_12685 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EBA12_12685 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EBA12_12690 PF00545 ribonuclease EBA12_12715 PF03880 DbpA RNA binding domain EBA12_12715 PF00271 Helicase conserved C-terminal domain EBA12_12715 PF00270 DEAD/DEAH box helicase EBA12_12720 PF00156 Phosphoribosyl transferase domain EBA12_12725 PF02696 Uncharacterized ACR, YdiU/UPF0061 family EBA12_12735 PF14497 Glutathione S-transferase, C-terminal domain EBA12_12735 PF02798 Glutathione S-transferase, N-terminal domain EBA12_12740 PF00313 'Cold-shock' DNA-binding domain EBA12_12745 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 EBA12_12750 PF07152 YaeQ protein EBA12_12760 PF00498 FHA domain EBA12_12760 PF00990 Diguanylate cyclase, GGDEF domain EBA12_12760 PF00563 EAL domain EBA12_12765 PF01435 Peptidase family M48 EBA12_12770 PF00749 tRNA synthetases class I (E and Q), catalytic domain EBA12_12775 PF00106 short chain dehydrogenase EBA12_12780 PF07879 PHB/PHA accumulation regulator DNA-binding domain EBA12_12780 PF05233 PHB accumulation regulatory domain EBA12_12795 PF01119 DNA mismatch repair protein, C-terminal domain EBA12_12795 PF08676 MutL C terminal dimerisation domain EBA12_12800 PF01520 N-acetylmuramoyl-L-alanine amidase EBA12_12800 PF11741 AMIN domain EBA12_12805 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE EBA12_12810 PF01256 Carbohydrate kinase EBA12_12810 PF03853 YjeF-related protein N-terminus EBA12_12815 PF08331 Domain of unknown function (DUF1730) EBA12_12820 PF02601 Exonuclease VII, large subunit EBA12_12820 PF13742 OB-fold nucleic acid binding domain EBA12_12835 PF01609 Transposase DDE domain EBA12_12835 PF05598 Transposase domain (DUF772) EBA12_12845 PF03781 Sulfatase-modifying factor enzyme 1 EBA12_12860 PF01612 3'-5' exonuclease EBA12_12860 PF00570 HRDC domain EBA12_12895 PF01584 CheW-like domain EBA12_12900 PF02743 Cache domain EBA12_12900 PF00672 HAMP domain EBA12_12900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA12_12930 PF04386 Stringent starvation protein B EBA12_12935 PF00043 Glutathione S-transferase, C-terminal domain EBA12_12935 PF02798 Glutathione S-transferase, N-terminal domain EBA12_12940 PF02167 Cytochrome C1 family EBA12_12945 PF00033 Cytochrome b/b6/petB EBA12_12945 PF00032 Cytochrome b(C-terminal)/b6/petD EBA12_12950 PF00355 Rieske [2Fe-2S] domain EBA12_12950 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal EBA12_12960 PF01464 Transglycosylase SLT domain EBA12_12980 PF00919 Uncharacterized protein family UPF0004 EBA12_12980 PF01938 TRAM domain EBA12_12980 PF04055 Radical SAM superfamily EBA12_12985 PF02562 PhoH-like protein EBA12_12995 PF02130 Uncharacterized protein family UPF0054 EBA12_13005 PF00571 CBS domain EBA12_13005 PF03471 Transporter associated domain EBA12_13020 PF00171 Aldehyde dehydrogenase family EBA12_13025 PF00528 Binding-protein-dependent transport system inner membrane component EBA12_13030 PF00528 Binding-protein-dependent transport system inner membrane component EBA12_13040 PF00005 ABC transporter EBA12_13040 PF08402 TOBE domain EBA12_13045 PF02321 Outer membrane efflux protein EBA12_13050 PF07690 Major Facilitator Superfamily EBA12_13055 PF13533 Biotin-lipoyl like EBA12_13070 PF01609 Transposase DDE domain EBA12_13070 PF05598 Transposase domain (DUF772) EBA12_13085 PF00120 Glutamine synthetase, catalytic domain EBA12_13095 PF00120 Glutamine synthetase, catalytic domain EBA12_13100 PF01266 FAD dependent oxidoreductase EBA12_13105 PF00072 Response regulator receiver domain EBA12_13105 PF00990 Diguanylate cyclase, GGDEF domain EBA12_13110 PF00083 Sugar (and other) transporter EBA12_13110 PF07690 Major Facilitator Superfamily EBA12_13120 PF00384 Molybdopterin oxidoreductase EBA12_13125 PF02634 FdhD/NarQ family EBA12_13130 PF07690 Major Facilitator Superfamily EBA12_13140 PF00202 Aminotransferase class-III EBA12_13145 PF00005 ABC transporter EBA12_13155 PF04286 Protein of unknown function (DUF445) EBA12_13160 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EBA12_13160 PF00072 Response regulator receiver domain EBA12_13160 PF01627 Hpt domain EBA12_13160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_13160 PF00512 His Kinase A (phospho-acceptor) domain EBA12_13160 PF00672 HAMP domain EBA12_13165 PF00072 Response regulator receiver domain EBA12_13170 PF05598 Transposase domain (DUF772) EBA12_13170 PF01609 Transposase DDE domain EBA12_13210 PF05598 Transposase domain (DUF772) EBA12_13220 PF01609 Transposase DDE domain EBA12_13220 PF05598 Transposase domain (DUF772) EBA12_13230 PF05088 Bacterial NAD-glutamate dehydrogenase EBA12_13240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EBA12_13240 PF00529 HlyD membrane-fusion protein of T1SS EBA12_13245 PF00873 AcrB/AcrD/AcrF family EBA12_13260 PF00356 Bacterial regulatory proteins, lacI family EBA12_13265 PF00381 PTS HPr component phosphorylation site EBA12_13265 PF02896 PEP-utilising enzyme, TIM barrel domain EBA12_13265 PF00391 PEP-utilising enzyme, mobile domain EBA12_13265 PF05524 PEP-utilising enzyme, N-terminal EBA12_13265 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EBA12_13270 PF00294 pfkB family carbohydrate kinase EBA12_13275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EBA12_13285 PF16671 Actin cross-linking domain EBA12_13285 PF04717 Type VI secretion system, phage-baseplate injector EBA12_13305 PF05598 Transposase domain (DUF772) EBA12_13325 PF07549 SecD/SecF GG Motif EBA12_13325 PF02355 Protein export membrane protein EBA12_13330 PF07549 SecD/SecF GG Motif EBA12_13330 PF02355 Protein export membrane protein EBA12_13330 PF13721 SecD export protein N-terminal TM region EBA12_13335 PF02699 Preprotein translocase subunit EBA12_13340 PF01702 Queuine tRNA-ribosyltransferase EBA12_13345 PF02547 Queuosine biosynthesis protein EBA12_13410 PF00037 4Fe-4S binding domain EBA12_13425 PF01467 Cytidylyltransferase-like EBA12_13435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_13435 PF00183 Hsp90 protein EBA12_13445 PF05598 Transposase domain (DUF772) EBA12_13470 PF04616 Glycosyl hydrolases family 43 EBA12_13475 PF07532 Bacterial Ig-like domain (group 4) EBA12_13480 PF00593 TonB dependent receptor EBA12_13480 PF07715 TonB-dependent Receptor Plug Domain EBA12_13495 PF09286 Pro-kumamolisin, activation domain EBA12_13495 PF00082 Subtilase family EBA12_13535 PF05598 Transposase domain (DUF772) EBA12_13535 PF01609 Transposase DDE domain EBA12_13540 PF05598 Transposase domain (DUF772) EBA12_13540 PF01609 Transposase DDE domain EBA12_13550 PF13520 Amino acid permease EBA12_13565 PF00557 Metallopeptidase family M24 EBA12_13565 PF01321 Creatinase/Prolidase N-terminal domain EBA12_13570 PF00171 Aldehyde dehydrogenase family EBA12_13575 PF00701 Dihydrodipicolinate synthetase family EBA12_13580 PF04324 BFD-like [2Fe-2S] binding domain EBA12_13580 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA12_13590 PF01266 FAD dependent oxidoreductase EBA12_13595 PF05544 Proline racemase EBA12_13605 PF02881 SRP54-type protein, helical bundle domain EBA12_13605 PF00448 SRP54-type protein, GTPase domain EBA12_13620 PF00633 Helix-hairpin-helix motif EBA12_13620 PF10576 Iron-sulfur binding domain of endonuclease III EBA12_13620 PF00730 HhH-GPD superfamily base excision DNA repair protein EBA12_13620 PF14815 NUDIX domain EBA12_13625 PF04362 Bacterial Fe(2+) trafficking EBA12_13630 PF13426 PAS domain EBA12_13630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_13630 PF00072 Response regulator receiver domain EBA12_13660 PF08212 Lipocalin-like domain EBA12_13670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EBA12_13670 PF02770 Acyl-CoA dehydrogenase, middle domain EBA12_13670 PF12806 Acetyl-CoA dehydrogenase C-terminal like EBA12_13670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EBA12_13680 PF13292 1-deoxy-D-xylulose-5-phosphate synthase EBA12_13680 PF02779 Transketolase, pyrimidine binding domain EBA12_13680 PF02780 Transketolase, C-terminal domain EBA12_13700 PF03808 Glycosyl transferase WecB/TagA/CpsF family EBA12_13715 PF14667 Polysaccharide biosynthesis C-terminal domain EBA12_13725 PF00534 Glycosyl transferases group 1 EBA12_13725 PF13439 Glycosyltransferase Family 4 EBA12_13745 PF02397 Bacterial sugar transferase EBA12_13765 PF13411 MerR HTH family regulatory protein EBA12_13770 PF00216 Bacterial DNA-binding protein EBA12_13775 PF03147 Ferredoxin-fold anticodon binding domain EBA12_13775 PF03483 B3/4 domain EBA12_13775 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EBA12_13775 PF01588 Putative tRNA binding domain EBA12_13775 PF03484 tRNA synthetase B5 domain EBA12_13780 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EBA12_13780 PF01409 tRNA synthetases class II core domain (F) EBA12_13785 PF00453 Ribosomal protein L20 EBA12_13790 PF01632 Ribosomal protein L35 EBA12_13795 PF00707 Translation initiation factor IF-3, C-terminal domain EBA12_13795 PF05198 Translation initiation factor IF-3, N-terminal domain EBA12_13800 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EBA12_13800 PF02824 TGS domain EBA12_13800 PF03129 Anticodon binding domain EBA12_13800 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EBA12_13815 PF03989 DNA gyrase C-terminal domain, beta-propeller EBA12_13815 PF00521 DNA gyrase/topoisomerase IV, subunit A EBA12_13820 PF01008 Initiation factor 2 subunit family EBA12_13835 PF00152 tRNA synthetases class II (D, K and N) EBA12_13840 PF12826 Helix-hairpin-helix motif EBA12_13840 PF03119 NAD-dependent DNA ligase C4 zinc finger domain EBA12_13840 PF03120 NAD-dependent DNA ligase OB-fold domain EBA12_13840 PF00533 BRCA1 C Terminus (BRCT) domain EBA12_13840 PF01653 NAD-dependent DNA ligase adenylation domain EBA12_13845 PF00155 Aminotransferase class I and II EBA12_13850 PF04354 ZipA, C-terminal FtsZ-binding domain EBA12_13855 PF02463 RecF/RecN/SMC N terminal domain EBA12_13860 PF03948 Ribosomal protein L9, C-terminal domain EBA12_13860 PF01281 Ribosomal protein L9, N-terminal domain EBA12_13865 PF01084 Ribosomal protein S18 EBA12_13870 PF01250 Ribosomal protein S6 EBA12_13875 PF01521 Iron-sulphur cluster biosynthesis EBA12_13885 PF00152 tRNA synthetases class II (D, K and N) EBA12_13885 PF01336 OB-fold nucleic acid binding domain EBA12_13910 PF00484 Carbonic anhydrase EBA12_13915 PF06052 3-hydroxyanthranilic acid dioxygenase EBA12_13935 PF00266 Aminotransferase class-V EBA12_13940 PF01494 FAD binding domain EBA12_13945 PF00929 Exonuclease EBA12_13945 PF08411 Exonuclease C-terminal EBA12_13955 PF00248 Aldo/keto reductase family EBA12_13970 PF01513 ATP-NAD kinase EBA12_13985 PF02926 THUMP domain EBA12_13985 PF10672 S-adenosylmethionine-dependent methyltransferase EBA12_13985 PF01170 Putative RNA methylase family UPF0020 EBA12_14025 PF00581 Rhodanese-like domain EBA12_14030 PF00293 NUDIX domain EBA12_14035 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EBA12_14035 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EBA12_14040 PF00378 Enoyl-CoA hydratase/isomerase EBA12_14050 PF10576 Iron-sulfur binding domain of endonuclease III EBA12_14050 PF00633 Helix-hairpin-helix motif EBA12_14050 PF00730 HhH-GPD superfamily base excision DNA repair protein EBA12_14055 PF00916 Sulfate permease family EBA12_14055 PF01740 STAS domain EBA12_14060 PF00484 Carbonic anhydrase EBA12_14075 PF12849 PBP superfamily domain EBA12_14080 PF12849 PBP superfamily domain EBA12_14085 PF00528 Binding-protein-dependent transport system inner membrane component EBA12_14090 PF00528 Binding-protein-dependent transport system inner membrane component EBA12_14095 PF00005 ABC transporter EBA12_14100 PF01895 PhoU domain EBA12_14110 PF00929 Exonuclease EBA12_14120 PF08032 RNA 2'-O ribose methyltransferase substrate binding EBA12_14120 PF00588 SpoU rRNA Methylase family EBA12_14135 PF08206 Ribonuclease B OB domain EBA12_14135 PF00773 RNB domain EBA12_14135 PF17876 Cold shock domain EBA12_14135 PF00575 S1 RNA binding domain EBA12_14135 PF08461 Ribonuclease R winged-helix domain EBA12_14165 PF02770 Acyl-CoA dehydrogenase, middle domain EBA12_14165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EBA12_14165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EBA12_14170 PF01209 ubiE/COQ5 methyltransferase family EBA12_14175 PF02574 Homocysteine S-methyltransferase EBA12_14175 PF00809 Pterin binding enzyme EBA12_14180 PF02607 B12 binding domain EBA12_14180 PF02310 B12 binding domain EBA12_14180 PF02965 Vitamin B12 dependent methionine synthase, activation domain EBA12_14180 PF02574 Homocysteine S-methyltransferase EBA12_14180 PF00809 Pterin binding enzyme EBA12_14190 PF00294 pfkB family carbohydrate kinase EBA12_14195 PF07690 Major Facilitator Superfamily EBA12_14215 PF04102 SlyX EBA12_14220 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EBA12_14220 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EBA12_14220 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EBA12_14225 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EBA12_14225 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EBA12_14230 PF00255 Glutathione peroxidase EBA12_14240 PF00392 Bacterial regulatory proteins, gntR family EBA12_14245 PF00005 ABC transporter EBA12_14275 PF10415 Fumarase C C-terminus EBA12_14275 PF00206 Lyase EBA12_14285 PF01609 Transposase DDE domain EBA12_14285 PF05598 Transposase domain (DUF772) EBA12_14300 PF08328 Adenylosuccinate lyase C-terminal EBA12_14300 PF00206 Lyase EBA12_14315 PF08007 Cupin superfamily protein EBA12_14325 PF02779 Transketolase, pyrimidine binding domain EBA12_14325 PF16870 2-oxoglutarate dehydrogenase C-terminal EBA12_14325 PF00676 Dehydrogenase E1 component EBA12_14325 PF16078 2-oxoglutarate dehydrogenase N-terminus EBA12_14330 PF00364 Biotin-requiring enzyme EBA12_14330 PF02817 e3 binding domain EBA12_14330 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EBA12_14335 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA12_14335 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EBA12_14340 PF03641 Possible lysine decarboxylase EBA12_14345 PF01205 Uncharacterized protein family UPF0029 EBA12_14350 PF00664 ABC transporter transmembrane region EBA12_14350 PF00005 ABC transporter EBA12_14380 PF08543 Phosphomethylpyrimidine kinase EBA12_14390 PF00684 DnaJ central domain EBA12_14390 PF01556 DnaJ C terminal domain EBA12_14390 PF00226 DnaJ domain EBA12_14395 PF00012 Hsp70 protein EBA12_14400 PF01025 GrpE EBA12_14405 PF01628 HrcA protein C terminal domain EBA12_14405 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding EBA12_14410 PF02463 RecF/RecN/SMC N terminal domain EBA12_14415 PF01475 Ferric uptake regulator family EBA12_14420 PF04355 SmpA / OmlA family EBA12_14430 PF03658 RnfH family Ubiquitin EBA12_14440 PF01668 SmpB protein EBA12_14445 PF00082 Subtilase family EBA12_14465 PF01609 Transposase DDE domain EBA12_14465 PF05598 Transposase domain (DUF772) EBA12_14470 PF05598 Transposase domain (DUF772) EBA12_14510 PF01053 Cys/Met metabolism PLP-dependent enzyme EBA12_14520 PF07722 Peptidase C26 EBA12_14525 PF01810 LysE type translocator EBA12_14530 PF04204 Homoserine O-succinyltransferase EBA12_14535 PF00120 Glutamine synthetase, catalytic domain EBA12_14545 PF05598 Transposase domain (DUF772) EBA12_14565 PF00990 Diguanylate cyclase, GGDEF domain EBA12_14565 PF08448 PAS fold EBA12_14580 PF05736 OprF membrane domain EBA12_14580 PF00691 OmpA family EBA12_14600 PF03441 FAD binding domain of DNA photolyase EBA12_14600 PF00875 DNA photolyase EBA12_14605 PF00772 DnaB-like helicase N terminal domain EBA12_14605 PF03796 DnaB-like helicase C terminal domain EBA12_14610 PF03358 NADPH-dependent FMN reductase EBA12_14615 PF00733 Asparagine synthase EBA12_14615 PF13537 Glutamine amidotransferase domain EBA12_14620 PF13417 Glutathione S-transferase, N-terminal domain EBA12_14645 PF01026 TatD related DNase EBA12_14650 PF00899 ThiF family EBA12_14665 PF00313 'Cold-shock' DNA-binding domain EBA12_14690 PF00672 HAMP domain EBA12_14690 PF02203 Tar ligand binding domain homologue EBA12_14690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA12_14695 PF05598 Transposase domain (DUF772) EBA12_14705 PF01609 Transposase DDE domain EBA12_14705 PF05598 Transposase domain (DUF772) EBA12_14720 PF01609 Transposase DDE domain EBA12_14720 PF05598 Transposase domain (DUF772) EBA12_14735 PF05681 Fumarate hydratase (Fumerase) EBA12_14735 PF05683 Fumarase C-terminus EBA12_14745 PF00005 ABC transporter EBA12_14750 PF00970 Oxidoreductase FAD-binding domain EBA12_14750 PF00175 Oxidoreductase NAD-binding domain EBA12_14755 PF00255 Glutathione peroxidase EBA12_14785 PF08281 Sigma-70, region 4 EBA12_14785 PF04542 Sigma-70 region 2 EBA12_14795 PF12802 MarR family EBA12_14830 PF01915 Glycosyl hydrolase family 3 C-terminal domain EBA12_14830 PF00933 Glycosyl hydrolase family 3 N terminal domain EBA12_14830 PF14310 Fibronectin type III-like domain EBA12_14855 PF07690 Major Facilitator Superfamily EBA12_14860 PF00529 HlyD membrane-fusion protein of T1SS EBA12_14860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EBA12_14865 PF02321 Outer membrane efflux protein EBA12_14875 PF12833 Helix-turn-helix domain EBA12_14880 PF03989 DNA gyrase C-terminal domain, beta-propeller EBA12_14880 PF00521 DNA gyrase/topoisomerase IV, subunit A EBA12_14890 PF00210 Ferritin-like domain EBA12_14895 PF01804 Penicillin amidase EBA12_14905 PF00593 TonB dependent receptor EBA12_14905 PF07715 TonB-dependent Receptor Plug Domain EBA12_14915 PF00733 Asparagine synthase EBA12_14915 PF13537 Glutamine amidotransferase domain EBA12_14920 PF01546 Peptidase family M20/M25/M40 EBA12_14920 PF07687 Peptidase dimerisation domain EBA12_14930 PF03960 ArsC family EBA12_14940 PF00132 Bacterial transferase hexapeptide (six repeats) EBA12_14940 PF14602 Hexapeptide repeat of succinyl-transferase EBA12_14940 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal EBA12_14945 PF01966 HD domain EBA12_14945 PF01909 Nucleotidyltransferase domain EBA12_14945 PF08335 GlnD PII-uridylyltransferase EBA12_14950 PF00557 Metallopeptidase family M24 EBA12_14985 PF00318 Ribosomal protein S2 EBA12_14990 PF00889 Elongation factor TS EBA12_15000 PF00696 Amino acid kinase family EBA12_15005 PF01765 Ribosome recycling factor EBA12_15010 PF01255 Putative undecaprenyl diphosphate synthase EBA12_15020 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase EBA12_15020 PF13288 DXP reductoisomerase C-terminal domain EBA12_15020 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain EBA12_15025 PF02163 Peptidase family M50 EBA12_15025 PF17820 PDZ domain EBA12_15030 PF01103 Surface antigen EBA12_15030 PF07244 Surface antigen variable number repeat EBA12_15040 PF00132 Bacterial transferase hexapeptide (six repeats) EBA12_15040 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD EBA12_15045 PF07977 FabA-like domain EBA12_15050 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 EBA12_15050 PF00132 Bacterial transferase hexapeptide (six repeats) EBA12_15055 PF02684 Lipid-A-disaccharide synthetase EBA12_15060 PF01351 Ribonuclease HII EBA12_15065 PF14579 Helix-hairpin-helix motif EBA12_15065 PF07733 Bacterial DNA polymerase III alpha NTPase domain EBA12_15065 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EBA12_15065 PF02811 PHP domain EBA12_15065 PF01336 OB-fold nucleic acid binding domain EBA12_15070 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit EBA12_15145 PF02592 Putative vitamin uptake transporter EBA12_15160 PF02574 Homocysteine S-methyltransferase EBA12_15165 PF00324 Amino acid permease EBA12_15170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EBA12_15180 PF01588 Putative tRNA binding domain EBA12_15180 PF09334 tRNA synthetases class I (M) EBA12_15190 PF04060 Putative Fe-S cluster EBA12_15210 PF04542 Sigma-70 region 2 EBA12_15210 PF04545 Sigma-70, region 4 EBA12_15255 PF01042 Endoribonuclease L-PSP EBA12_15265 PF09924 Uncharacterised conserved protein (DUF2156) EBA12_15265 PF03706 Lysylphosphatidylglycerol synthase TM region EBA12_15305 PF07690 Major Facilitator Superfamily EBA12_15310 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EBA12_15325 PF08274 PhnA Zinc-Ribbon EBA12_15325 PF03831 PhnA domain EBA12_15335 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EBA12_15370 PF12680 SnoaL-like domain EBA12_15370 PF04542 Sigma-70 region 2 EBA12_15370 PF08281 Sigma-70, region 4 EBA12_15380 PF01258 Prokaryotic dksA/traR C4-type zinc finger EBA12_15390 PF07043 Protein of unknown function (DUF1328) EBA12_15395 PF01863 Protein of unknown function DUF45 EBA12_15405 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EBA12_15405 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EBA12_15410 PF03797 Autotransporter beta-domain EBA12_15410 PF12951 Passenger-associated-transport-repeat EBA12_15410 PF00082 Subtilase family EBA12_15415 PF02803 Thiolase, C-terminal domain EBA12_15415 PF00108 Thiolase, N-terminal domain EBA12_15430 PF00990 Diguanylate cyclase, GGDEF domain EBA12_15430 PF00072 Response regulator receiver domain EBA12_15445 PF04675 DNA ligase N terminus EBA12_15445 PF01068 ATP dependent DNA ligase domain EBA12_15445 PF04679 ATP dependent DNA ligase C terminal region EBA12_15455 PF01068 ATP dependent DNA ligase domain EBA12_15455 PF04675 DNA ligase N terminus EBA12_15455 PF04679 ATP dependent DNA ligase C terminal region EBA12_15460 PF00271 Helicase conserved C-terminal domain EBA12_15460 PF00270 DEAD/DEAH box helicase EBA12_15460 PF08494 DEAD/H associated EBA12_15480 PF00313 'Cold-shock' DNA-binding domain EBA12_15485 PF01048 Phosphorylase superfamily EBA12_15495 PF00933 Glycosyl hydrolase family 3 N terminal domain EBA12_15500 PF04244 Deoxyribodipyrimidine photo-lyase-related protein EBA12_15505 PF01593 Flavin containing amine oxidoreductase EBA12_15520 PF05958 tRNA (Uracil-5-)-methyltransferase EBA12_15530 PF02565 Recombination protein O C terminal EBA12_15530 PF11967 Recombination protein O N terminal EBA12_15535 PF07650 KH domain EBA12_15535 PF01926 50S ribosome-binding GTPase EBA12_15540 PF00035 Double-stranded RNA binding motif EBA12_15540 PF14622 Ribonuclease-III-like EBA12_15550 PF10502 Signal peptidase, peptidase S26 EBA12_15555 PF00679 Elongation factor G C-terminus EBA12_15555 PF06421 GTP-binding protein LepA C-terminus EBA12_15555 PF03144 Elongation factor Tu domain 2 EBA12_15555 PF00009 Elongation factor Tu GTP binding domain EBA12_15560 PF13180 PDZ domain EBA12_15570 PF08281 Sigma-70, region 4 EBA12_15570 PF04542 Sigma-70 region 2 EBA12_15575 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EBA12_15575 PF00378 Enoyl-CoA hydratase/isomerase EBA12_15575 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EBA12_15580 PF01545 Cation efflux family EBA12_15585 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EBA12_15585 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EBA12_15590 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EBA12_15590 PF00378 Enoyl-CoA hydratase/isomerase EBA12_15590 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EBA12_15595 PF00378 Enoyl-CoA hydratase/isomerase EBA12_15600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EBA12_15600 PF02770 Acyl-CoA dehydrogenase, middle domain EBA12_15600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EBA12_15605 PF00171 Aldehyde dehydrogenase family EBA12_15610 PF01381 Helix-turn-helix EBA12_15610 PF09856 Predicted transcriptional regulator (DUF2083) EBA12_15610 PF06114 IrrE N-terminal-like domain EBA12_15625 PF05598 Transposase domain (DUF772) EBA12_15650 PF01627 Hpt domain EBA12_15650 PF00512 His Kinase A (phospho-acceptor) domain EBA12_15650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_15650 PF00672 HAMP domain EBA12_15650 PF00072 Response regulator receiver domain EBA12_15650 PF17149 Periplasmic sensor domain found in signal transduction proteins EBA12_15660 PF17149 Periplasmic sensor domain found in signal transduction proteins EBA12_15660 PF00672 HAMP domain EBA12_15660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_15660 PF00512 His Kinase A (phospho-acceptor) domain EBA12_15660 PF01627 Hpt domain EBA12_15660 PF00072 Response regulator receiver domain EBA12_15665 PF01627 Hpt domain EBA12_15665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_15665 PF00672 HAMP domain EBA12_15665 PF17149 Periplasmic sensor domain found in signal transduction proteins EBA12_15665 PF00072 Response regulator receiver domain EBA12_15665 PF00512 His Kinase A (phospho-acceptor) domain EBA12_15670 PF01627 Hpt domain EBA12_15670 PF00672 HAMP domain EBA12_15670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_15670 PF00512 His Kinase A (phospho-acceptor) domain EBA12_15670 PF00072 Response regulator receiver domain EBA12_15670 PF17149 Periplasmic sensor domain found in signal transduction proteins EBA12_15675 PF04264 YceI-like domain EBA12_15700 PF03315 Serine dehydratase beta chain EBA12_15700 PF03313 Serine dehydratase alpha chain EBA12_15710 PF01053 Cys/Met metabolism PLP-dependent enzyme EBA12_15715 PF00561 alpha/beta hydrolase fold EBA12_15720 PF01551 Peptidase family M23 EBA12_15720 PF08525 Opacity-associated protein A N-terminal motif EBA12_15720 PF01476 LysM domain EBA12_15725 PF16658 Class II release factor RF3, C-terminal domain EBA12_15725 PF00009 Elongation factor Tu GTP binding domain EBA12_15730 PF03006 Haemolysin-III related EBA12_15740 PF05598 Transposase domain (DUF772) EBA12_15750 PF00571 CBS domain EBA12_15750 PF00478 IMP dehydrogenase / GMP reductase domain EBA12_15755 PF00535 Glycosyl transferase family 2 EBA12_15760 PF00912 Transglycosylase EBA12_15765 PF01430 Hsp33 protein EBA12_15775 PF07715 TonB-dependent Receptor Plug Domain EBA12_15775 PF00593 TonB dependent receptor EBA12_15780 PF00440 Bacterial regulatory proteins, tetR family EBA12_15785 PF00561 alpha/beta hydrolase fold EBA12_15790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EBA12_15790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EBA12_15790 PF09317 Domain of unknown function (DUF1974) EBA12_15820 PF01597 Glycine cleavage H-protein EBA12_15825 PF01571 Aminomethyltransferase folate-binding domain EBA12_15825 PF08669 Glycine cleavage T-protein C-terminal barrel domain EBA12_15835 PF16200 C-terminal region of band_7 EBA12_15835 PF01145 SPFH domain / Band 7 family EBA12_15845 PF02694 Uncharacterised BCR, YnfA/UPF0060 family EBA12_15850 PF03819 MazG nucleotide pyrophosphohydrolase domain EBA12_15855 PF00459 Inositol monophosphatase family EBA12_15860 PF00293 NUDIX domain EBA12_15865 PF00202 Aminotransferase class-III EBA12_15870 PF04452 RNA methyltransferase EBA12_15875 PF02685 Glucokinase EBA12_15890 PF00704 Glycosyl hydrolases family 18 EBA12_15890 PF01476 LysM domain EBA12_15910 PF01915 Glycosyl hydrolase family 3 C-terminal domain EBA12_15910 PF14310 Fibronectin type III-like domain EBA12_15910 PF00933 Glycosyl hydrolase family 3 N terminal domain EBA12_15910 PF07691 PA14 domain EBA12_15915 PF03412 Peptidase C39 family EBA12_15915 PF00005 ABC transporter EBA12_15915 PF00664 ABC transporter transmembrane region EBA12_15925 PF05598 Transposase domain (DUF772) EBA12_15935 PF13683 Integrase core domain EBA12_15935 PF13276 HTH-like domain EBA12_15945 PF13936 Helix-turn-helix domain EBA12_15945 PF00665 Integrase core domain EBA12_15960 PF01609 Transposase DDE domain EBA12_15960 PF05598 Transposase domain (DUF772) EBA12_15980 PF00005 ABC transporter EBA12_15980 PF03412 Peptidase C39 family EBA12_15980 PF00664 ABC transporter transmembrane region EBA12_15990 PF05598 Transposase domain (DUF772) EBA12_16015 PF17678 Glycosyl hydrolase family 92 N-terminal domain EBA12_16015 PF07971 Glycosyl hydrolase family 92 EBA12_16025 PF01301 Glycosyl hydrolases family 35 EBA12_16060 PF03932 CutC family EBA12_16065 PF01112 Asparaginase EBA12_16075 PF12450 von Willebrand factor EBA12_16075 PF12034 Domain of unknown function (DUF3520) EBA12_16075 PF00092 von Willebrand factor type A domain EBA12_16085 PF13302 Acetyltransferase (GNAT) domain EBA12_16100 PF00072 Response regulator receiver domain EBA12_16100 PF01584 CheW-like domain EBA12_16100 PF01627 Hpt domain EBA12_16100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_16105 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term EBA12_16105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EBA12_16110 PF01584 CheW-like domain EBA12_16115 PF00072 Response regulator receiver domain EBA12_16120 PF00072 Response regulator receiver domain EBA12_16125 PF02951 Prokaryotic glutathione synthetase, N-terminal domain EBA12_16125 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain EBA12_16135 PF03747 ADP-ribosylglycohydrolase EBA12_16140 PF00814 Glycoprotease family EBA12_16145 PF04851 Type III restriction enzyme, res subunit EBA12_16145 PF13307 Helicase C-terminal domain EBA12_16155 PF00912 Transglycosylase EBA12_16155 PF14814 Bifunctional transglycosylase second domain EBA12_16155 PF00905 Penicillin binding protein transpeptidase domain EBA12_16160 PF00535 Glycosyl transferase family 2 EBA12_16170 PF02824 TGS domain EBA12_16170 PF04607 Region found in RelA / SpoT proteins EBA12_16170 PF13291 ACT domain EBA12_16175 PF08042 PqqA family EBA12_16180 PF12706 Beta-lactamase superfamily domain EBA12_16185 PF03070 TENA/THI-4/PQQC family EBA12_16190 PF05402 Coenzyme PQQ synthesis protein D (PqqD) EBA12_16195 PF13186 Iron-sulfur cluster-binding domain EBA12_16195 PF04055 Radical SAM superfamily EBA12_16220 PF04408 Helicase associated domain (HA2) EBA12_16220 PF11898 Domain of unknown function (DUF3418) EBA12_16220 PF00271 Helicase conserved C-terminal domain EBA12_16220 PF00270 DEAD/DEAH box helicase EBA12_16220 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold EBA12_16225 PF00210 Ferritin-like domain EBA12_16240 PF00270 DEAD/DEAH box helicase EBA12_16240 PF00271 Helicase conserved C-terminal domain EBA12_16240 PF00570 HRDC domain EBA12_16240 PF16124 RecQ zinc-binding EBA12_16240 PF09382 RQC domain EBA12_16255 PF01609 Transposase DDE domain EBA12_16255 PF05598 Transposase domain (DUF772) EBA12_16270 PF01479 S4 domain EBA12_16270 PF00849 RNA pseudouridylate synthase EBA12_16310 PF06508 Queuosine biosynthesis protein QueC EBA12_16320 PF04055 Radical SAM superfamily EBA12_16330 PF00691 OmpA family EBA12_16335 PF07676 WD40-like Beta Propeller Repeat EBA12_16335 PF04052 TolB amino-terminal domain EBA12_16345 PF02472 Biopolymer transport protein ExbD/TolR EBA12_16350 PF01618 MotA/TolQ/ExbB proton channel family EBA12_16355 PF03061 Thioesterase superfamily EBA12_16360 PF17864 RuvB AAA lid domain EBA12_16360 PF05491 RuvB C-terminal winged helix domain EBA12_16360 PF05496 Holliday junction DNA helicase RuvB P-loop domain EBA12_16365 PF02705 K+ potassium transporter EBA12_16370 PF07499 RuvA, C-terminal domain EBA12_16370 PF01330 RuvA N terminal domain EBA12_16375 PF02075 Crossover junction endodeoxyribonuclease RuvC EBA12_16380 PF01709 Transcriptional regulator EBA12_16395 PF00152 tRNA synthetases class II (D, K and N) EBA12_16395 PF02938 GAD domain EBA12_16395 PF01336 OB-fold nucleic acid binding domain EBA12_16410 PF07690 Major Facilitator Superfamily EBA12_16415 PF05506 Domain of unknown function (DUF756) EBA12_16415 PF04185 Phosphoesterase family EBA12_16435 PF03466 LysR substrate binding domain EBA12_16435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA12_16445 PF00005 ABC transporter EBA12_16445 PF12848 ABC transporter EBA12_16450 PF07715 TonB-dependent Receptor Plug Domain EBA12_16450 PF00593 TonB dependent receptor EBA12_16460 PF00593 TonB dependent receptor EBA12_16460 PF07715 TonB-dependent Receptor Plug Domain EBA12_16465 PF00593 TonB dependent receptor EBA12_16465 PF07715 TonB-dependent Receptor Plug Domain EBA12_16475 PF02254 TrkA-N domain EBA12_16475 PF00999 Sodium/hydrogen exchanger family EBA12_16510 PF00753 Metallo-beta-lactamase superfamily EBA12_16510 PF04273 Putative phosphatase (DUF442) EBA12_16520 PF07715 TonB-dependent Receptor Plug Domain EBA12_16520 PF07660 Secretin and TonB N terminus short domain EBA12_16520 PF00593 TonB dependent receptor EBA12_16530 PF06276 Ferric iron reductase FhuF-like transporter EBA12_16530 PF04183 IucA / IucC family EBA12_16535 PF07690 Major Facilitator Superfamily EBA12_16545 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EBA12_16545 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EBA12_16555 PF02654 Cobalamin-5-phosphate synthase EBA12_16565 PF02277 Phosphoribosyltransferase EBA12_16570 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase EBA12_16575 PF00155 Aminotransferase class I and II EBA12_16580 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP EBA12_16580 PF12557 Cob(I)alamin adenosyltransferase N terminal EBA12_16600 PF00593 TonB dependent receptor EBA12_16600 PF07715 TonB-dependent Receptor Plug Domain EBA12_16635 PF10431 C-terminal, D2-small domain, of ClpB protein EBA12_16635 PF17871 AAA lid domain EBA12_16635 PF07724 AAA domain (Cdc48 subfamily) EBA12_16635 PF02861 Clp amino terminal domain, pathogenicity island component EBA12_16635 PF00004 ATPase family associated with various cellular activities (AAA) EBA12_16640 PF01541 GIY-YIG catalytic domain EBA12_16650 PF01624 MutS domain I EBA12_16650 PF05192 MutS domain III EBA12_16650 PF05190 MutS family domain IV EBA12_16650 PF00488 MutS domain V EBA12_16650 PF05188 MutS domain II EBA12_16660 PF00141 Peroxidase EBA12_16665 PF01479 S4 domain EBA12_16670 PF01554 MatE EBA12_16680 PF01245 Ribosomal protein L19 EBA12_16685 PF01746 tRNA (Guanine-1)-methyltransferase EBA12_16690 PF05239 PRC-barrel domain EBA12_16690 PF01782 RimM N-terminal domain EBA12_16695 PF00886 Ribosomal protein S16 EBA12_16720 PF02881 SRP54-type protein, helical bundle domain EBA12_16720 PF00448 SRP54-type protein, GTPase domain EBA12_16720 PF02978 Signal peptide binding domain EBA12_16730 PF01578 Cytochrome C assembly protein EBA12_16735 PF01263 Aldose 1-epimerase EBA12_16740 PF06964 Alpha-L-arabinofuranosidase C-terminal domain EBA12_16755 PF13188 PAS domain EBA12_16755 PF00072 Response regulator receiver domain EBA12_16755 PF00512 His Kinase A (phospho-acceptor) domain EBA12_16755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_16755 PF08448 PAS fold EBA12_16760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_16760 PF00072 Response regulator receiver domain EBA12_16760 PF17149 Periplasmic sensor domain found in signal transduction proteins EBA12_16760 PF00672 HAMP domain EBA12_16760 PF01627 Hpt domain EBA12_16760 PF00512 His Kinase A (phospho-acceptor) domain EBA12_16770 PF13581 Histidine kinase-like ATPase domain EBA12_16775 PF01740 STAS domain EBA12_16780 PF08678 Rsbr N terminal EBA12_16780 PF01740 STAS domain EBA12_16790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_16790 PF00183 Hsp90 protein EBA12_16795 PF12833 Helix-turn-helix domain EBA12_16810 PF18073 Rubredoxin metal binding domain EBA12_16845 PF14220 Domain of unknown function (DUF4329) EBA12_16845 PF05593 RHS Repeat EBA12_16845 PF03527 RHS protein EBA12_16855 PF05593 RHS Repeat EBA12_16855 PF14220 Domain of unknown function (DUF4329) EBA12_16855 PF03527 RHS protein EBA12_16865 PF04717 Type VI secretion system, phage-baseplate injector EBA12_16875 PF03626 Prokaryotic Cytochrome C oxidase subunit IV EBA12_16880 PF00510 Cytochrome c oxidase subunit III EBA12_16885 PF00115 Cytochrome C and Quinol oxidase polypeptide I EBA12_16890 PF06481 COX Aromatic Rich Motif EBA12_16890 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EBA12_16900 PF02401 LytB protein EBA12_16905 PF01252 Signal peptidase (SPase) II EBA12_16910 PF06827 Zinc finger found in FPG and IleRS EBA12_16910 PF08264 Anticodon-binding domain of tRNA EBA12_16910 PF00133 tRNA synthetases class I (I, L, M and V) EBA12_16920 PF03023 Lipid II flippase MurJ EBA12_16925 PF01649 Ribosomal protein S20 EBA12_16930 PF01926 50S ribosome-binding GTPase EBA12_16930 PF01018 GTP1/OBG EBA12_16935 PF01016 Ribosomal L27 protein EBA12_16940 PF00829 Ribosomal prokaryotic L21 protein EBA12_16945 PF17760 UvrA interaction domain EBA12_16945 PF17755 UvrA DNA-binding domain EBA12_16945 PF00005 ABC transporter EBA12_16960 PF00378 Enoyl-CoA hydratase/isomerase EBA12_16975 PF08281 Sigma-70, region 4 EBA12_16975 PF04542 Sigma-70 region 2 EBA12_16990 PF04377 Arginine-tRNA-protein transferase, C terminus EBA12_16990 PF04376 Arginine-tRNA-protein transferase, N terminus EBA12_17020 PF00593 TonB dependent receptor EBA12_17020 PF07715 TonB-dependent Receptor Plug Domain EBA12_17030 PF02358 Trehalose-phosphatase EBA12_17035 PF00723 Glycosyl hydrolases family 15 EBA12_17040 PF00982 Glycosyltransferase family 20 EBA12_17045 PF01011 PQQ enzyme repeat EBA12_17070 PF00849 RNA pseudouridylate synthase EBA12_17075 PF13525 Outer membrane lipoprotein EBA12_17080 PF02540 NAD synthase EBA12_17080 PF00795 Carbon-nitrogen hydrolase EBA12_17095 PF02629 CoA binding domain EBA12_17095 PF00549 CoA-ligase EBA12_17100 PF08442 ATP-grasp domain EBA12_17100 PF00549 CoA-ligase EBA12_17105 PF00512 His Kinase A (phospho-acceptor) domain EBA12_17105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_17110 PF00158 Sigma-54 interaction domain EBA12_17110 PF02954 Bacterial regulatory protein, Fis family EBA12_17110 PF00072 Response regulator receiver domain EBA12_17120 PF02661 Fic/DOC family EBA12_17125 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EBA12_17125 PF00437 Type II/IV secretion system protein EBA12_17140 PF00884 Sulfatase EBA12_17140 PF08019 Phosphoethanolamine transferase EptA/EptB EBA12_17145 PF07963 Prokaryotic N-terminal methylation motif EBA12_17145 PF00114 Pilin (bacterial filament) EBA12_17150 PF00482 Type II secretion system (T2SS), protein F EBA12_17155 PF06750 Bacterial Peptidase A24 N-terminal domain EBA12_17155 PF01478 Type IV leader peptidase family EBA12_17160 PF01121 Dephospho-CoA kinase EBA12_17165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_17165 PF00672 HAMP domain EBA12_17165 PF00512 His Kinase A (phospho-acceptor) domain EBA12_17170 PF00486 Transcriptional regulatory protein, C terminal EBA12_17170 PF00072 Response regulator receiver domain EBA12_17180 PF18030 RimK PreATP-grasp domain EBA12_17180 PF08443 RimK-like ATP-grasp domain EBA12_17185 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EBA12_17185 PF00128 Alpha amylase, catalytic domain EBA12_17190 PF05598 Transposase domain (DUF772) EBA12_17190 PF01609 Transposase DDE domain EBA12_17205 PF01609 Transposase DDE domain EBA12_17205 PF05598 Transposase domain (DUF772) EBA12_17210 PF05598 Transposase domain (DUF772) EBA12_17220 PF13683 Integrase core domain EBA12_17220 PF13276 HTH-like domain EBA12_17230 PF01609 Transposase DDE domain EBA12_17230 PF05598 Transposase domain (DUF772) EBA12_17255 PF05690 Thiazole biosynthesis protein ThiG EBA12_17265 PF02390 Putative methyltransferase EBA12_17270 PF03600 Citrate transporter EBA12_17270 PF02080 TrkA-C domain EBA12_17295 PF01557 Fumarylacetoacetate (FAA) hydrolase family EBA12_17300 PF01741 Large-conductance mechanosensitive channel, MscL EBA12_17335 PF08032 RNA 2'-O ribose methyltransferase substrate binding EBA12_17335 PF00588 SpoU rRNA Methylase family EBA12_17350 PF01433 Peptidase family M1 domain EBA12_17350 PF11838 ERAP1-like C-terminal domain EBA12_17355 PF00873 AcrB/AcrD/AcrF family EBA12_17360 PF00529 HlyD membrane-fusion protein of T1SS EBA12_17360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EBA12_17365 PF00009 Elongation factor Tu GTP binding domain EBA12_17370 PF01507 Phosphoadenosine phosphosulfate reductase family EBA12_17375 PF00258 Flavodoxin EBA12_17375 PF00175 Oxidoreductase NAD-binding domain EBA12_17375 PF00667 FAD binding domain EBA12_17380 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EBA12_17380 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EBA12_17385 PF01507 Phosphoadenosine phosphosulfate reductase family EBA12_17405 PF00512 His Kinase A (phospho-acceptor) domain EBA12_17405 PF00072 Response regulator receiver domain EBA12_17405 PF01627 Hpt domain EBA12_17405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_17405 PF00672 HAMP domain EBA12_17430 PF03466 LysR substrate binding domain EBA12_17430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA12_17435 PF10414 Sirohaem synthase dimerisation region EBA12_17435 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EBA12_17435 PF14824 Sirohaem biosynthesis protein central EBA12_17440 PF00291 Pyridoxal-phosphate dependent enzyme EBA12_17450 PF01661 Macro domain EBA12_17455 PF00274 Fructose-bisphosphate aldolase class-I EBA12_17465 PF00224 Pyruvate kinase, barrel domain EBA12_17465 PF02887 Pyruvate kinase, alpha/beta domain EBA12_17475 PF00162 Phosphoglycerate kinase EBA12_17490 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EBA12_17490 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EBA12_17505 PF04273 Putative phosphatase (DUF442) EBA12_17505 PF00753 Metallo-beta-lactamase superfamily EBA12_17515 PF00528 Binding-protein-dependent transport system inner membrane component EBA12_17520 PF03459 TOBE domain EBA12_17520 PF00005 ABC transporter EBA12_17540 PF00512 His Kinase A (phospho-acceptor) domain EBA12_17540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_17540 PF08521 Two-component sensor kinase N-terminal EBA12_17545 PF00486 Transcriptional regulatory protein, C terminal EBA12_17545 PF00072 Response regulator receiver domain EBA12_17565 PF00501 AMP-binding enzyme EBA12_17595 PF01476 LysM domain EBA12_17595 PF03734 L,D-transpeptidase catalytic domain EBA12_17600 PF04225 Opacity-associated protein A LysM-like domain EBA12_17600 PF01551 Peptidase family M23 EBA12_17615 PF02779 Transketolase, pyrimidine binding domain EBA12_17615 PF00456 Transketolase, thiamine diphosphate binding domain EBA12_17615 PF02780 Transketolase, C-terminal domain EBA12_17620 PF00375 Sodium:dicarboxylate symporter family EBA12_17640 PF00092 von Willebrand factor type A domain EBA12_17640 PF07584 Aerotolerance regulator N-terminal EBA12_17660 PF07726 ATPase family associated with various cellular activities (AAA) EBA12_17660 PF17863 AAA lid domain EBA12_17670 PF11741 AMIN domain EBA12_17670 PF00263 Bacterial type II and III secretion system protein EBA12_17670 PF07660 Secretin and TonB N terminus short domain EBA12_17670 PF03958 Bacterial type II/III secretion system short domain EBA12_17695 PF00905 Penicillin binding protein transpeptidase domain EBA12_17695 PF00912 Transglycosylase EBA12_17695 PF17092 Penicillin-binding protein OB-like domain EBA12_17700 PF05598 Transposase domain (DUF772) EBA12_17715 PF00285 Citrate synthase, C-terminal domain EBA12_17720 PF01197 Ribosomal protein L31 EBA12_17725 PF01156 Inosine-uridine preferring nucleoside hydrolase EBA12_17730 PF00270 DEAD/DEAH box helicase EBA12_17730 PF17191 RecG wedge domain EBA12_17730 PF00271 Helicase conserved C-terminal domain EBA12_17735 PF01042 Endoribonuclease L-PSP EBA12_17740 PF02824 TGS domain EBA12_17740 PF13291 ACT domain EBA12_17740 PF04607 Region found in RelA / SpoT proteins EBA12_17745 PF01192 RNA polymerase Rpb6 EBA12_17755 PF00625 Guanylate kinase EBA12_17760 PF08340 Domain of unknown function (DUF1732) EBA12_17760 PF03755 YicC-like family, N-terminal region EBA12_17765 PF03725 3' exoribonuclease family, domain 2 EBA12_17765 PF01138 3' exoribonuclease family, domain 1 EBA12_17775 PF01725 Ham1 family EBA12_17780 PF04055 Radical SAM superfamily EBA12_17780 PF06969 HemN C-terminal domain EBA12_17795 PF00557 Metallopeptidase family M24 EBA12_17810 PF05195 Aminopeptidase P, N-terminal domain EBA12_17810 PF00557 Metallopeptidase family M24 EBA12_17815 PF03695 Uncharacterised protein family (UPF0149) EBA12_17825 PF05164 Cell division protein ZapA EBA12_17845 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EBA12_17855 PF13369 Transglutaminase-like superfamily EBA12_17860 PF00301 Rubredoxin EBA12_17865 PF02581 Thiamine monophosphate synthase EBA12_17875 PF00202 Aminotransferase class-III EBA12_17885 PF17874 MalT-like TPR region EBA12_17885 PF00196 Bacterial regulatory proteins, luxR family EBA12_17890 PF00127 Copper binding proteins, plastocyanin/azurin family EBA12_17930 PF00202 Aminotransferase class-III EBA12_17955 PF01569 PAP2 superfamily EBA12_17970 PF01062 Bestrophin, RFP-TM, chloride channel EBA12_17980 PF08245 Mur ligase middle domain EBA12_17980 PF02875 Mur ligase family, glutamate ligase domain EBA12_17980 PF01225 Mur ligase family, catalytic domain EBA12_17990 PF00365 Phosphofructokinase EBA12_17995 PF01609 Transposase DDE domain EBA12_17995 PF05598 Transposase domain (DUF772) EBA12_18010 PF03030 Inorganic H+ pyrophosphatase EBA12_18020 PF00719 Inorganic pyrophosphatase EBA12_18035 PF00593 TonB dependent receptor EBA12_18035 PF07715 TonB-dependent Receptor Plug Domain EBA12_18040 PF12833 Helix-turn-helix domain EBA12_18045 PF00486 Transcriptional regulatory protein, C terminal EBA12_18045 PF18500 CadC C-terminal domain 1 EBA12_18050 PF01964 Radical SAM ThiC family EBA12_18050 PF13667 ThiC-associated domain EBA12_18060 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain EBA12_18060 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain EBA12_18065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EBA12_18065 PF00205 Thiamine pyrophosphate enzyme, central domain EBA12_18065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EBA12_18075 PF00291 Pyridoxal-phosphate dependent enzyme EBA12_18080 PF08502 LeuA allosteric (dimerisation) domain EBA12_18080 PF00682 HMGL-like EBA12_18085 PF00180 Isocitrate/isopropylmalate dehydrogenase EBA12_18090 PF08241 Methyltransferase domain EBA12_18095 PF00694 Aconitase C-terminal domain EBA12_18100 PF00330 Aconitase family (aconitate hydratase) EBA12_18105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA12_18125 PF02321 Outer membrane efflux protein EBA12_18130 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) EBA12_18135 PF03279 Bacterial lipid A biosynthesis acyltransferase EBA12_18155 PF01609 Transposase DDE domain EBA12_18155 PF05598 Transposase domain (DUF772) EBA12_18165 PF00665 Integrase core domain EBA12_18165 PF13936 Helix-turn-helix domain EBA12_18170 PF00005 ABC transporter EBA12_18170 PF03412 Peptidase C39 family EBA12_18170 PF00664 ABC transporter transmembrane region EBA12_18205 PF05598 Transposase domain (DUF772) EBA12_18230 PF01609 Transposase DDE domain EBA12_18230 PF05598 Transposase domain (DUF772) EBA12_18245 PF00390 Malic enzyme, N-terminal domain EBA12_18245 PF01515 Phosphate acetyl/butaryl transferase EBA12_18245 PF03949 Malic enzyme, NAD binding domain EBA12_18250 PF00375 Sodium:dicarboxylate symporter family EBA12_18265 PF00512 His Kinase A (phospho-acceptor) domain EBA12_18265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_18270 PF07690 Major Facilitator Superfamily EBA12_18280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA12_18280 PF03466 LysR substrate binding domain EBA12_18300 PF00196 Bacterial regulatory proteins, luxR family EBA12_18300 PF00072 Response regulator receiver domain EBA12_18310 PF00512 His Kinase A (phospho-acceptor) domain EBA12_18310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_18310 PF08521 Two-component sensor kinase N-terminal EBA12_18315 PF00072 Response regulator receiver domain EBA12_18315 PF00486 Transcriptional regulatory protein, C terminal EBA12_18330 PF03600 Citrate transporter EBA12_18335 PF00106 short chain dehydrogenase EBA12_18345 PF00356 Bacterial regulatory proteins, lacI family EBA12_18350 PF05598 Transposase domain (DUF772) EBA12_18365 PF00128 Alpha amylase, catalytic domain EBA12_18380 PF03193 RsgA GTPase EBA12_18385 PF00155 Aminotransferase class I and II EBA12_18405 PF01522 Polysaccharide deacetylase EBA12_18410 PF00462 Glutaredoxin EBA12_18430 PF01979 Amidohydrolase family EBA12_18480 PF01327 Polypeptide deformylase EBA12_18485 PF05598 Transposase domain (DUF772) EBA12_18485 PF01609 Transposase DDE domain EBA12_18490 PF03960 ArsC family EBA12_18520 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain EBA12_18520 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family EBA12_18565 PF07715 TonB-dependent Receptor Plug Domain EBA12_18565 PF00593 TonB dependent receptor EBA12_18580 PF07702 UTRA domain EBA12_18580 PF00392 Bacterial regulatory proteins, gntR family EBA12_18595 PF00263 Bacterial type II and III secretion system protein EBA12_18595 PF03958 Bacterial type II/III secretion system short domain EBA12_18605 PF10741 Type II secretion system (T2SS), protein M subtype b EBA12_18610 PF05137 Fimbrial assembly protein (PilN) EBA12_18615 PF03934 Type II secretion system (T2SS), protein K EBA12_18625 PF07963 Prokaryotic N-terminal methylation motif EBA12_18630 PF12019 Type II transport protein GspH EBA12_18635 PF08334 Type II secretion system (T2SS), protein G EBA12_18640 PF00482 Type II secretion system (T2SS), protein F EBA12_18650 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EBA12_18650 PF00437 Type II/IV secretion system protein EBA12_18655 PF00082 Subtilase family EBA12_18655 PF04151 Bacterial pre-peptidase C-terminal domain EBA12_18660 PF03895 YadA-like membrane anchor domain EBA12_18660 PF05662 Coiled stalk of trimeric autotransporter adhesin EBA12_18660 PF05658 Head domain of trimeric autotransporter adhesin EBA12_18660 PF13018 Extended Signal Peptide of Type V secretion system EBA12_18670 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain EBA12_18670 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal EBA12_18670 PF02769 AIR synthase related protein, C-terminal domain EBA12_18680 PF10411 Disulfide bond isomerase protein N-terminus EBA12_18680 PF13098 Thioredoxin-like domain EBA12_18685 PF00589 Phage integrase family EBA12_18685 PF02899 Phage integrase, N-terminal SAM-like domain EBA12_18700 PF03739 Lipopolysaccharide export system permease LptF/LptG EBA12_18710 PF02789 Cytosol aminopeptidase family, N-terminal domain EBA12_18710 PF00883 Cytosol aminopeptidase family, catalytic domain EBA12_18735 PF10458 Valyl tRNA synthetase tRNA binding arm EBA12_18735 PF00133 tRNA synthetases class I (I, L, M and V) EBA12_18735 PF08264 Anticodon-binding domain of tRNA EBA12_18745 PF01464 Transglycosylase SLT domain EBA12_18745 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain EBA12_18755 PF05598 Transposase domain (DUF772) EBA12_18765 PF00665 Integrase core domain EBA12_18765 PF13936 Helix-turn-helix domain EBA12_18775 PF00665 Integrase core domain EBA12_18775 PF13936 Helix-turn-helix domain EBA12_18800 PF01066 CDP-alcohol phosphatidyltransferase EBA12_18810 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EBA12_18810 PF04073 Aminoacyl-tRNA editing domain EBA12_18810 PF03129 Anticodon binding domain EBA12_18815 PF00816 H-NS histone family EBA12_18825 PF02405 Permease MlaE EBA12_18830 PF00005 ABC transporter EBA12_18835 PF02470 MlaD protein EBA12_18835 PF03886 ABC-type transport auxiliary lipoprotein component EBA12_18865 PF14307 Glycosyltransferase WbsX EBA12_18865 PF05045 Rhamnan synthesis protein F EBA12_18870 PF01144 Coenzyme A transferase EBA12_18875 PF01144 Coenzyme A transferase EBA12_18880 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EBA12_18880 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EBA12_18880 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EBA12_18880 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EBA12_18885 PF00483 Nucleotidyl transferase EBA12_18885 PF01050 Mannose-6-phosphate isomerase EBA12_18890 PF04321 RmlD substrate binding domain EBA12_18895 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase EBA12_18900 PF00483 Nucleotidyl transferase EBA12_18905 PF16363 GDP-mannose 4,6 dehydratase EBA12_18915 PF01012 Electron transfer flavoprotein domain EBA12_18920 PF01012 Electron transfer flavoprotein domain EBA12_18920 PF00766 Electron transfer flavoprotein FAD-binding domain EBA12_18930 PF00005 ABC transporter EBA12_18940 PF05598 Transposase domain (DUF772) EBA12_18975 PF01370 NAD dependent epimerase/dehydratase family EBA12_18985 PF01053 Cys/Met metabolism PLP-dependent enzyme EBA12_18990 PF00571 CBS domain EBA12_18990 PF00291 Pyridoxal-phosphate dependent enzyme EBA12_19010 PF00437 Type II/IV secretion system protein EBA12_19015 PF14497 Glutathione S-transferase, C-terminal domain EBA12_19015 PF02798 Glutathione S-transferase, N-terminal domain EBA12_19030 PF00270 DEAD/DEAH box helicase EBA12_19030 PF00271 Helicase conserved C-terminal domain EBA12_19040 PF01242 6-pyruvoyl tetrahydropterin synthase EBA12_19055 PF13185 GAF domain EBA12_19065 PF13419 Haloacid dehalogenase-like hydrolase EBA12_19070 PF00817 impB/mucB/samB family EBA12_19070 PF11799 impB/mucB/samB family C-terminal domain EBA12_19080 PF07977 FabA-like domain EBA12_19085 PF02801 Beta-ketoacyl synthase, C-terminal domain EBA12_19085 PF00109 Beta-ketoacyl synthase, N-terminal domain EBA12_19095 PF01432 Peptidase family M3 EBA12_19110 PF07732 Multicopper oxidase EBA12_19110 PF07731 Multicopper oxidase EBA12_19110 PF00394 Multicopper oxidase EBA12_19115 PF05275 Copper resistance protein B precursor (CopB) EBA12_19120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EBA12_19145 PF01380 SIS domain EBA12_19190 PF14602 Hexapeptide repeat of succinyl-transferase EBA12_19190 PF12804 MobA-like NTP transferase domain EBA12_19190 PF00132 Bacterial transferase hexapeptide (six repeats) EBA12_19205 PF01817 Chorismate mutase type II EBA12_19210 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain EBA12_19215 PF02874 ATP synthase alpha/beta family, beta-barrel domain EBA12_19215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EBA12_19220 PF00231 ATP synthase EBA12_19225 PF00306 ATP synthase alpha/beta chain, C terminal domain EBA12_19225 PF02874 ATP synthase alpha/beta family, beta-barrel domain EBA12_19225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EBA12_19230 PF00213 ATP synthase delta (OSCP) subunit EBA12_19235 PF00430 ATP synthase B/B' CF(0) EBA12_19240 PF00137 ATP synthase subunit C EBA12_19245 PF00119 ATP synthase A chain EBA12_19265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EBA12_19265 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBA12_19275 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EBA12_19275 PF00364 Biotin-requiring enzyme EBA12_19275 PF02817 e3 binding domain EBA12_19305 PF03180 NLPA lipoprotein EBA12_19310 PF00528 Binding-protein-dependent transport system inner membrane component EBA12_19315 PF09383 NIL domain EBA12_19315 PF00005 ABC transporter EBA12_19320 PF00892 EamA-like transporter family EBA12_19325 PF04461 Protein of unknown function (DUF520) EBA12_19355 PF13419 Haloacid dehalogenase-like hydrolase EBA12_19360 PF00849 RNA pseudouridylate synthase EBA12_19360 PF01479 S4 domain EBA12_19365 PF05175 Methyltransferase small domain EBA12_19365 PF08468 Methyltransferase small domain N-terminal EBA12_19380 PF07995 Glucose / Sorbosone dehydrogenase EBA12_19395 PF00512 His Kinase A (phospho-acceptor) domain EBA12_19395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_19395 PF00989 PAS fold EBA12_19415 PF01168 Alanine racemase, N-terminal domain EBA12_19415 PF00842 Alanine racemase, C-terminal domain EBA12_19420 PF01266 FAD dependent oxidoreductase EBA12_19425 PF01037 Lrp/AsnC ligand binding domain EBA12_19435 PF01641 SelR domain EBA12_19445 PF01618 MotA/TolQ/ExbB proton channel family EBA12_19450 PF00691 OmpA family EBA12_19450 PF13677 Membrane MotB of proton-channel complex MotA/MotB EBA12_19470 PF00072 Response regulator receiver domain EBA12_19470 PF00486 Transcriptional regulatory protein, C terminal EBA12_19475 PF13188 PAS domain EBA12_19475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_19475 PF08448 PAS fold EBA12_19475 PF00072 Response regulator receiver domain EBA12_19475 PF00512 His Kinase A (phospho-acceptor) domain EBA12_19485 PF04151 Bacterial pre-peptidase C-terminal domain EBA12_19485 PF00082 Subtilase family EBA12_19500 PF01061 ABC-2 type transporter EBA12_19505 PF00005 ABC transporter EBA12_19510 PF00999 Sodium/hydrogen exchanger family EBA12_19520 PF02469 Fasciclin domain EBA12_19530 PF03167 Uracil DNA glycosylase superfamily EBA12_19540 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase EBA12_19550 PF03358 NADPH-dependent FMN reductase EBA12_19570 PF05649 Peptidase family M13 EBA12_19570 PF01431 Peptidase family M13 EBA12_19590 PF13520 Amino acid permease EBA12_19600 PF00072 Response regulator receiver domain EBA12_19600 PF04397 LytTr DNA-binding domain EBA12_19615 PF05974 Domain of unknown function (DUF892) EBA12_19620 PF05067 Manganese containing catalase EBA12_19635 PF03705 CheR methyltransferase, all-alpha domain EBA12_19635 PF01739 CheR methyltransferase, SAM binding domain EBA12_19635 PF01339 CheB methylesterase EBA12_19635 PF08448 PAS fold EBA12_19645 PF01609 Transposase DDE domain EBA12_19645 PF05598 Transposase domain (DUF772) EBA12_19660 PF02954 Bacterial regulatory protein, Fis family EBA12_19660 PF00158 Sigma-54 interaction domain EBA12_19660 PF00072 Response regulator receiver domain EBA12_19675 PF01654 Cytochrome bd terminal oxidase subunit I EBA12_19680 PF02322 Cytochrome bd terminal oxidase subunit II EBA12_19715 PF08240 Alcohol dehydrogenase GroES-like domain EBA12_19715 PF13823 Alcohol dehydrogenase GroES-associated EBA12_19715 PF00107 Zinc-binding dehydrogenase EBA12_19755 PF00593 TonB dependent receptor EBA12_19755 PF07715 TonB-dependent Receptor Plug Domain EBA12_19770 PF00005 ABC transporter EBA12_19790 PF03971 Monomeric isocitrate dehydrogenase EBA12_19810 PF14489 QueF-like protein EBA12_19810 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term EBA12_19820 PF01546 Peptidase family M20/M25/M40 EBA12_19820 PF07687 Peptidase dimerisation domain EBA12_19825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EBA12_19830 PF00873 AcrB/AcrD/AcrF family EBA12_19835 PF00873 AcrB/AcrD/AcrF family EBA12_19855 PF07063 Domain of unknown function (DUF1338) EBA12_19905 PF01510 N-acetylmuramoyl-L-alanine amidase EBA12_19915 PF13378 Enolase C-terminal domain-like EBA12_19915 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EBA12_19940 PF13520 Amino acid permease EBA12_19960 PF05360 yiaA/B two helix domain EBA12_19965 PF07995 Glucose / Sorbosone dehydrogenase EBA12_19980 PF01915 Glycosyl hydrolase family 3 C-terminal domain EBA12_19980 PF00933 Glycosyl hydrolase family 3 N terminal domain EBA12_19980 PF14310 Fibronectin type III-like domain EBA12_19985 PF02152 Dihydroneopterin aldolase EBA12_19990 PF00814 Glycoprotease family EBA12_19995 PF01165 Ribosomal protein S21 EBA12_20000 PF09424 Yqey-like protein EBA12_20020 PF03631 Virulence factor BrkB EBA12_20025 PF08275 DNA primase catalytic core, N-terminal domain EBA12_20025 PF01807 CHC2 zinc finger EBA12_20025 PF08278 DNA primase DnaG DnaB-binding EBA12_20025 PF10410 DnaB-helicase binding domain of primase EBA12_20035 PF13593 SBF-like CPA transporter family (DUF4137) EBA12_20055 PF01040 UbiA prenyltransferase family EBA12_20080 PF00510 Cytochrome c oxidase subunit III EBA12_20085 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 EBA12_20095 PF00115 Cytochrome C and Quinol oxidase polypeptide I EBA12_20100 PF02790 Cytochrome C oxidase subunit II, transmembrane domain EBA12_20100 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EBA12_20110 PF18327 Proline utilization A proline dehydrogenase N-terminal domain EBA12_20110 PF00171 Aldehyde dehydrogenase family EBA12_20110 PF01619 Proline dehydrogenase EBA12_20110 PF14850 DNA-binding domain of Proline dehydrogenase EBA12_20120 PF05598 Transposase domain (DUF772) EBA12_20160 PF00579 tRNA synthetases class I (W and Y) EBA12_20165 PF01551 Peptidase family M23 EBA12_20165 PF04225 Opacity-associated protein A LysM-like domain EBA12_20170 PF03702 Anhydro-N-acetylmuramic acid kinase EBA12_20180 PF07690 Major Facilitator Superfamily EBA12_20185 PF03372 Endonuclease/Exonuclease/phosphatase family EBA12_20190 PF00156 Phosphoribosyl transferase domain EBA12_20200 PF13614 AAA domain EBA12_20205 PF02195 ParB-like nuclease domain EBA12_20205 PF17762 HTH domain found in ParB protein EBA12_20215 PF01370 NAD dependent epimerase/dehydratase family EBA12_20220 PF00535 Glycosyl transferase family 2 EBA12_20235 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EBA12_20235 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EBA12_20235 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EBA12_20235 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EBA12_20240 PF00692 dUTPase EBA12_20245 PF04127 DNA / pantothenate metabolism flavoprotein EBA12_20245 PF02441 Flavoprotein EBA12_20250 PF04002 RadC-like JAB domain EBA12_20255 PF05746 DALR anticodon binding domain EBA12_20255 PF00750 tRNA synthetases class I (R) EBA12_20255 PF03485 Arginyl tRNA synthetase N terminal domain EBA12_20270 PF00106 short chain dehydrogenase EBA12_20280 PF03377 TAL effector repeat EBA12_20310 PF17810 Arginine decarboxylase helical bundle domain EBA12_20310 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EBA12_20310 PF17944 Arginine decarboxylase C-terminal helical extension EBA12_20315 PF17284 Spermidine synthase tetramerisation domain EBA12_20350 PF00543 Nitrogen regulatory protein P-II EBA12_20355 PF04380 Membrane fusogenic activity EBA12_20360 PF01078 Magnesium chelatase, subunit ChlI EBA12_20360 PF13335 Magnesium chelatase, subunit ChlI C-terminal EBA12_20385 PF12792 CSS motif domain associated with EAL EBA12_20385 PF00563 EAL domain EBA12_20390 PF00487 Fatty acid desaturase EBA12_20395 PF00175 Oxidoreductase NAD-binding domain EBA12_20395 PF00970 Oxidoreductase FAD-binding domain EBA12_20395 PF00111 2Fe-2S iron-sulfur cluster binding domain EBA12_20400 PF00440 Bacterial regulatory proteins, tetR family EBA12_20405 PF01609 Transposase DDE domain EBA12_20405 PF05598 Transposase domain (DUF772) EBA12_20465 PF08338 Domain of unknown function (DUF1731) EBA12_20465 PF01370 NAD dependent epimerase/dehydratase family EBA12_20475 PF00512 His Kinase A (phospho-acceptor) domain EBA12_20475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_20475 PF08521 Two-component sensor kinase N-terminal EBA12_20490 PF00595 PDZ domain EBA12_20515 PF01594 AI-2E family transporter EBA12_20525 PF02789 Cytosol aminopeptidase family, N-terminal domain EBA12_20525 PF00883 Cytosol aminopeptidase family, catalytic domain EBA12_20535 PF08281 Sigma-70, region 4 EBA12_20535 PF04542 Sigma-70 region 2 EBA12_20540 PF00199 Catalase EBA12_20560 PF00892 EamA-like transporter family EBA12_20565 PF00892 EamA-like transporter family EBA12_20590 PF00753 Metallo-beta-lactamase superfamily EBA12_20595 PF00579 tRNA synthetases class I (W and Y) EBA12_20600 PF05532 CsbD-like EBA12_20615 PF00491 Arginase family EBA12_20635 PF02223 Thymidylate kinase EBA12_20650 PF03309 Type III pantothenate kinase EBA12_20655 PF08279 HTH domain EBA12_20655 PF03099 Biotin/lipoate A/B protein ligase family EBA12_20655 PF02237 Biotin protein ligase C terminal domain EBA12_20665 PF06167 Glucose-regulated metallo-peptidase M90 EBA12_20680 PF00672 HAMP domain EBA12_20680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_20680 PF00512 His Kinase A (phospho-acceptor) domain EBA12_20685 PF00072 Response regulator receiver domain EBA12_20685 PF00486 Transcriptional regulatory protein, C terminal EBA12_20695 PF01207 Dihydrouridine synthase (Dus) EBA12_20710 PF03377 TAL effector repeat EBA12_20745 PF06628 Catalase-related immune-responsive EBA12_20745 PF00199 Catalase EBA12_20750 PF05598 Transposase domain (DUF772) EBA12_20750 PF01609 Transposase DDE domain EBA12_20755 PF13533 Biotin-lipoyl like EBA12_20770 PF13307 Helicase C-terminal domain EBA12_20770 PF06733 DEAD_2 EBA12_20785 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EBA12_20785 PF08501 Shikimate dehydrogenase substrate binding domain EBA12_20785 PF01488 Shikimate / quinate 5-dehydrogenase EBA12_20805 PF00258 Flavodoxin EBA12_20805 PF00667 FAD binding domain EBA12_20805 PF00175 Oxidoreductase NAD-binding domain EBA12_20815 PF03466 LysR substrate binding domain EBA12_20815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA12_20830 PF00490 Delta-aminolevulinic acid dehydratase EBA12_20855 PF00326 Prolyl oligopeptidase family EBA12_20855 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region EBA12_20865 PF00043 Glutathione S-transferase, C-terminal domain EBA12_20865 PF02798 Glutathione S-transferase, N-terminal domain EBA12_20875 PF13936 Helix-turn-helix domain EBA12_20875 PF00665 Integrase core domain EBA12_20905 PF00005 ABC transporter EBA12_20915 PF01381 Helix-turn-helix EBA12_20930 PF02583 Metal-sensitive transcriptional repressor EBA12_20935 PF01545 Cation efflux family EBA12_20940 PF00175 Oxidoreductase NAD-binding domain EBA12_20940 PF01383 CpcD/allophycocyanin linker domain EBA12_20945 PF00005 ABC transporter EBA12_20950 PF01061 ABC-2 type transporter EBA12_20960 PF02558 Ketopantoate reductase PanE/ApbA EBA12_20960 PF08546 Ketopantoate reductase PanE/ApbA C terminal EBA12_20995 PF13406 Transglycosylase SLT domain EBA12_21010 PF06470 SMC proteins Flexible Hinge Domain EBA12_21010 PF02463 RecF/RecN/SMC N terminal domain EBA12_21015 PF00268 Ribonucleotide reductase, small chain EBA12_21025 PF03477 ATP cone domain EBA12_21025 PF00317 Ribonucleotide reductase, all-alpha domain EBA12_21025 PF02867 Ribonucleotide reductase, barrel domain EBA12_21040 PF00583 Acetyltransferase (GNAT) family EBA12_21040 PF13380 CoA binding domain EBA12_21040 PF13607 Succinyl-CoA ligase like flavodoxin domain EBA12_21050 PF00571 CBS domain EBA12_21050 PF01769 Divalent cation transporter EBA12_21050 PF03448 MgtE intracellular N domain EBA12_21060 PF02254 TrkA-N domain EBA12_21060 PF00999 Sodium/hydrogen exchanger family EBA12_21075 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EBA12_21075 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EBA12_21080 PF00723 Glycosyl hydrolases family 15 EBA12_21095 PF05166 YcgL domain EBA12_21100 PF00109 Beta-ketoacyl synthase, N-terminal domain EBA12_21100 PF02801 Beta-ketoacyl synthase, C-terminal domain EBA12_21110 PF00535 Glycosyl transferase family 2 EBA12_21150 PF07977 FabA-like domain EBA12_21155 PF01553 Acyltransferase EBA12_21165 PF00550 Phosphopantetheine attachment site EBA12_21170 PF04820 Tryptophan halogenase EBA12_21210 PF01218 Coproporphyrinogen III oxidase EBA12_21230 PF01367 5'-3' exonuclease, C-terminal SAM fold EBA12_21230 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EBA12_21230 PF00476 DNA polymerase family A EBA12_21230 PF01612 3'-5' exonuclease EBA12_21280 PF14602 Hexapeptide repeat of succinyl-transferase EBA12_21280 PF12464 Maltose acetyltransferase EBA12_21295 PF00580 UvrD/REP helicase N-terminal domain EBA12_21295 PF13361 UvrD-like helicase C-terminal domain EBA12_21315 PF13396 Phospholipase_D-nuclease N-terminal EBA12_21315 PF13091 PLD-like domain EBA12_21320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBA12_21325 PF05598 Transposase domain (DUF772) EBA12_21330 PF03737 Aldolase/RraA EBA12_21345 PF04909 Amidohydrolase EBA12_21350 PF00471 Ribosomal protein L33 EBA12_21355 PF00830 Ribosomal L28 family EBA12_21375 PF02527 rRNA small subunit methyltransferase G EBA12_21380 PF16655 PhoD-like phosphatase, N-terminal domain EBA12_21380 PF09423 PhoD-like phosphatase EBA12_21385 PF09423 PhoD-like phosphatase EBA12_21385 PF16655 PhoD-like phosphatase, N-terminal domain EBA12_21390 PF01648 4'-phosphopantetheinyl transferase superfamily EBA12_21395 PF04226 Transglycosylase associated protein EBA12_21405 PF03372 Endonuclease/Exonuclease/phosphatase family EBA12_21420 PF00474 Sodium:solute symporter family EBA12_21425 PF04341 Protein of unknown function, DUF485 EBA12_21435 PF16177 Acetyl-coenzyme A synthetase N-terminus EBA12_21435 PF00501 AMP-binding enzyme EBA12_21435 PF13193 AMP-binding enzyme C-terminal domain EBA12_21440 PF00072 Response regulator receiver domain EBA12_21440 PF00196 Bacterial regulatory proteins, luxR family EBA12_21470 PF00248 Aldo/keto reductase family EBA12_21485 PF01557 Fumarylacetoacetate (FAA) hydrolase family EBA12_21495 PF13378 Enolase C-terminal domain-like EBA12_21495 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EBA12_21500 PF05336 L-rhamnose mutarotase EBA12_21505 PF07690 Major Facilitator Superfamily EBA12_21510 PF09339 IclR helix-turn-helix domain EBA12_21510 PF01614 Bacterial transcriptional regulator EBA12_21515 PF02659 Putative manganese efflux pump EBA12_21520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBA12_21520 PF00512 His Kinase A (phospho-acceptor) domain EBA12_21530 PF06165 Glycosyltransferase family 36 EBA12_21530 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain EBA12_21545 PF01011 PQQ enzyme repeat EBA12_21545 PF13360 PQQ-like domain EBA12_21545 PF13570 PQQ-like domain EBA12_21575 PF05598 Transposase domain (DUF772) EBA12_21575 PF01609 Transposase DDE domain EBA12_21585 PF01609 Transposase DDE domain EBA12_21585 PF05598 Transposase domain (DUF772) EBA12_21590 PF04357 TamB, inner membrane protein subunit of TAM complex EBA12_21595 PF01103 Surface antigen EBA12_21595 PF17243 POTRA domain TamA domain 1 EBA12_21600 PF00593 TonB dependent receptor EBA12_21600 PF07715 TonB-dependent Receptor Plug Domain EBA12_21605 PF13181 Tetratricopeptide repeat EBA12_21610 PF05746 DALR anticodon binding domain EBA12_21610 PF02092 Glycyl-tRNA synthetase beta subunit EBA12_21615 PF02091 Glycyl-tRNA synthetase alpha subunit EBA12_21620 PF00437 Type II/IV secretion system protein EBA12_21620 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EBA12_21630 PF00958 GMP synthase C terminal domain EBA12_21630 PF00117 Glutamine amidotransferase class-I EBA12_21640 PF00902 Sec-independent protein translocase protein (TatC) EBA12_21645 PF02416 mttA/Hcf106 family EBA12_21650 PF02416 mttA/Hcf106 family EBA12_21660 PF00762 Ferrochelatase EBA12_21665 PF12697 Alpha/beta hydrolase family EBA12_21690 PF04381 Putative exonuclease, RdgC EBA12_21695 PF01171 PP-loop family EBA12_21715 PF00356 Bacterial regulatory proteins, lacI family EBA12_21720 PF07477 Glycosyl hydrolase family 67 C-terminus EBA12_21720 PF03648 Glycosyl hydrolase family 67 N-terminus EBA12_21720 PF07488 Glycosyl hydrolase family 67 middle domain EBA12_21730 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EBA12_21730 PF13378 Enolase C-terminal domain-like EBA12_21735 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain EBA12_21735 PF04616 Glycosyl hydrolases family 43 EBA12_21740 PF14310 Fibronectin type III-like domain EBA12_21740 PF00933 Glycosyl hydrolase family 3 N terminal domain EBA12_21740 PF07691 PA14 domain EBA12_21740 PF01915 Glycosyl hydrolase family 3 C-terminal domain EBA12_21745 PF01232 Mannitol dehydrogenase Rossmann domain EBA12_21745 PF08125 Mannitol dehydrogenase C-terminal domain EBA12_21755 PF05598 Transposase domain (DUF772) EBA12_21780 PF13936 Helix-turn-helix domain EBA12_21780 PF00665 Integrase core domain EBA12_21800 PF02614 Glucuronate isomerase EBA12_21805 PF00331 Glycosyl hydrolase family 10 EBA12_21805 PF00553 Cellulose binding domain EBA12_21805 PF03422 Carbohydrate binding module (family 6) EBA12_21835 PF04616 Glycosyl hydrolases family 43 EBA12_21845 PF01609 Transposase DDE domain EBA12_21845 PF05598 Transposase domain (DUF772) EBA12_21875 PF02801 Beta-ketoacyl synthase, C-terminal domain EBA12_21875 PF00550 Phosphopantetheine attachment site EBA12_21875 PF08240 Alcohol dehydrogenase GroES-like domain EBA12_21875 PF00698 Acyl transferase domain EBA12_21875 PF08659 KR domain EBA12_21875 PF00109 Beta-ketoacyl synthase, N-terminal domain EBA12_21875 PF14765 Polyketide synthase dehydratase EBA12_21875 PF00107 Zinc-binding dehydrogenase EBA12_21875 PF16197 Ketoacyl-synthetase C-terminal extension EBA12_21880 PF01553 Acyltransferase EBA12_21895 PF00356 Bacterial regulatory proteins, lacI family EBA12_21910 PF04820 Tryptophan halogenase EBA12_21915 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EBA12_21920 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) EBA12_21925 PF04337 Protein of unknown function, DUF480 EBA12_21940 PF13361 UvrD-like helicase C-terminal domain EBA12_21940 PF00580 UvrD/REP helicase N-terminal domain EBA12_21945 PF00265 Thymidine kinase EBA12_21955 PF04349 Periplasmic glucan biosynthesis protein, MdoG EBA12_21965 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EBA12_21965 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EBA12_21965 PF06827 Zinc finger found in FPG and IleRS EBA12_21970 PF05598 Transposase domain (DUF772) EBA12_22005 PF13426 PAS domain EBA12_22005 PF08446 PAS fold EBA12_22005 PF01590 GAF domain EBA12_22005 PF00360 Phytochrome region EBA12_22010 PF01126 Heme oxygenase EBA12_22015 PF07690 Major Facilitator Superfamily EBA12_22020 PF01263 Aldose 1-epimerase EBA12_22030 PF02810 SEC-C motif EBA12_22035 PF01925 Sulfite exporter TauE/SafE EBA12_22040 PF05598 Transposase domain (DUF772) EBA12_22070 PF02463 RecF/RecN/SMC N terminal domain EBA12_22075 PF01227 GTP cyclohydrolase I EBA12_22105 PF00665 Integrase core domain EBA12_22105 PF13936 Helix-turn-helix domain EBA12_22115 PF00083 Sugar (and other) transporter EBA12_22120 PF05598 Transposase domain (DUF772) EBA12_22130 PF13396 Phospholipase_D-nuclease N-terminal EBA12_22130 PF13091 PLD-like domain EBA12_22175 PF00085 Thioredoxin EBA12_22190 PF00293 NUDIX domain EBA12_22190 PF13344 Haloacid dehalogenase-like hydrolase EBA12_22225 PF05532 CsbD-like EBA12_22250 PF00294 pfkB family carbohydrate kinase EBA12_22260 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase EBA12_22260 PF12241 Trans-2-enoyl-CoA reductase catalytic region EBA12_22260 PF07055 Enoyl reductase FAD binding domain EBA12_22280 PF01070 FMN-dependent dehydrogenase EBA12_22295 PF05598 Transposase domain (DUF772) EBA12_22305 PF00593 TonB dependent receptor EBA12_22305 PF07715 TonB-dependent Receptor Plug Domain EBA12_22310 PF00155 Aminotransferase class I and II EBA12_22315 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain EBA12_22335 PF05598 Transposase domain (DUF772) EBA12_22345 PF05598 Transposase domain (DUF772) EBA12_22345 PF01609 Transposase DDE domain EBA12_22365 PF00664 ABC transporter transmembrane region EBA12_22365 PF03412 Peptidase C39 family EBA12_22365 PF00005 ABC transporter EBA12_22370 PF05598 Transposase domain (DUF772) EBA12_22395 PF00849 RNA pseudouridylate synthase EBA12_22410 PF01751 Toprim domain EBA12_22410 PF01131 DNA topoisomerase EBA12_22410 PF01396 Topoisomerase DNA binding C4 zinc finger EBA12_22430 PF01609 Transposase DDE domain EBA12_22430 PF05598 Transposase domain (DUF772) EBA12_22450 PF05598 Transposase domain (DUF772) EBA12_22450 PF01609 Transposase DDE domain EBA12_22475 PF05598 Transposase domain (DUF772) EBA12_22475 PF01609 Transposase DDE domain EBA12_22545 PF13538 UvrD-like helicase C-terminal domain EBA12_22550 PF12705 PD-(D/E)XK nuclease superfamily EBA12_22550 PF00580 UvrD/REP helicase N-terminal domain EBA12_22550 PF13361 UvrD-like helicase C-terminal domain EBA12_22555 PF17946 RecC C-terminal domain EBA12_22560 PF00005 ABC transporter EBA12_22570 PF01609 Transposase DDE domain EBA12_22570 PF05598 Transposase domain (DUF772) EBA12_22575 PF05598 Transposase domain (DUF772) EBA12_22575 PF01609 Transposase DDE domain EBA12_22585 PF00005 ABC transporter EBA12_22605 PF00005 ABC transporter EBA12_22610 PF02405 Permease MlaE EBA12_22615 PF02470 MlaD protein EBA12_22620 PF05494 MlaC protein EBA12_22630 PF04333 MlaA lipoprotein EBA12_22655 PF00255 Glutathione peroxidase EBA12_22665 PF02646 RmuC family EBA12_22670 PF05598 Transposase domain (DUF772) EBA12_22670 PF01609 Transposase DDE domain EBA12_22690 PF07905 Purine catabolism regulatory protein-like family EBA12_22690 PF13556 PucR C-terminal helix-turn-helix domain EBA12_22695 PF02595 Glycerate kinase family EBA12_22700 PF07690 Major Facilitator Superfamily EBA12_22715 PF10672 S-adenosylmethionine-dependent methyltransferase EBA12_22715 PF17785 PUA-like domain EBA12_22725 PF03741 Integral membrane protein TerC family EBA12_22735 PF01694 Rhomboid family EBA12_22740 PF03009 Glycerophosphoryl diester phosphodiesterase family EBA12_22750 PF01569 PAP2 superfamily EBA12_22755 PF01926 50S ribosome-binding GTPase EBA12_22755 PF12631 MnmE helical domain EBA12_22755 PF10396 GTP-binding protein TrmE N-terminus EBA12_22760 PF01522 Polysaccharide deacetylase EBA12_22765 PF02096 60Kd inner membrane protein EBA12_22765 PF14849 YidC periplasmic domain EBA12_22770 PF00825 Ribonuclease P EBA12_22775 PF00468 Ribosomal protein L34