locus-tag class description BXU04_00010 PF00308 Bacterial dnaA protein BXU04_00010 PF08299 Bacterial dnaA protein helix-turn-helix BXU04_00010 PF11638 DnaA N-terminal domain BXU04_00015 PF00712 DNA polymerase III beta subunit, N-terminal domain BXU04_00015 PF02767 DNA polymerase III beta subunit, central domain BXU04_00015 PF02768 DNA polymerase III beta subunit, C-terminal domain BXU04_00020 PF02463 RecF/RecN/SMC N terminal domain BXU04_00025 PF00204 DNA gyrase B BXU04_00025 PF00986 DNA gyrase B subunit, carboxyl terminus BXU04_00025 PF18053 DNA gyrase B subunit insert domain BXU04_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_00025 PF01751 Toprim domain BXU04_00035 PF01435 Peptidase family M48 BXU04_00045 PF03544 Gram-negative bacterial TonB protein C-terminal BXU04_00050 PF01618 MotA/TolQ/ExbB proton channel family BXU04_00055 PF02472 Biopolymer transport protein ExbD/TolR BXU04_00060 PF02472 Biopolymer transport protein ExbD/TolR BXU04_00065 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BXU04_00075 PF13091 PLD-like domain BXU04_00075 PF13396 Phospholipase_D-nuclease N-terminal BXU04_00085 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BXU04_00090 PF00155 Aminotransferase class I and II BXU04_00095 PF07715 TonB-dependent Receptor Plug Domain BXU04_00095 PF00593 TonB dependent receptor BXU04_00110 PF01609 Transposase DDE domain BXU04_00110 PF05598 Transposase domain (DUF772) BXU04_00115 PF01070 FMN-dependent dehydrogenase BXU04_00120 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family BXU04_00140 PF12241 Trans-2-enoyl-CoA reductase catalytic region BXU04_00140 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase BXU04_00140 PF07055 Enoyl reductase FAD binding domain BXU04_00150 PF00294 pfkB family carbohydrate kinase BXU04_00165 PF05598 Transposase domain (DUF772) BXU04_00165 PF01609 Transposase DDE domain BXU04_00175 PF00005 ABC transporter BXU04_00185 PF05598 Transposase domain (DUF772) BXU04_00225 PF01609 Transposase DDE domain BXU04_00225 PF05598 Transposase domain (DUF772) BXU04_00235 PF00270 DEAD/DEAH box helicase BXU04_00235 PF00271 Helicase conserved C-terminal domain BXU04_00245 PF06903 VirK protein BXU04_00285 PF01609 Transposase DDE domain BXU04_00285 PF05598 Transposase domain (DUF772) BXU04_00335 PF03150 Di-haem cytochrome c peroxidase BXU04_00345 PF13460 NAD(P)H-binding BXU04_00350 PF00128 Alpha amylase, catalytic domain BXU04_00350 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BXU04_00360 PF00128 Alpha amylase, catalytic domain BXU04_00365 PF02446 4-alpha-glucanotransferase BXU04_00370 PF00128 Alpha amylase, catalytic domain BXU04_00370 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BXU04_00370 PF11941 Domain of unknown function (DUF3459) BXU04_00375 PF00128 Alpha amylase, catalytic domain BXU04_00375 PF02806 Alpha amylase, C-terminal all-beta domain BXU04_00375 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BXU04_00380 PF08323 Starch synthase catalytic domain BXU04_00380 PF00534 Glycosyl transferases group 1 BXU04_00385 PF00990 Diguanylate cyclase, GGDEF domain BXU04_00390 PF02638 Glycosyl hydrolase-like 10 BXU04_00395 PF05661 Protein of unknown function (DUF808) BXU04_00405 PF03109 ABC1 family BXU04_00415 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_00425 PF12794 Mechanosensitive ion channel inner membrane domain 1 BXU04_00425 PF12795 Mechanosensitive ion channel porin domain BXU04_00425 PF00924 Mechanosensitive ion channel BXU04_00445 PF01464 Transglycosylase SLT domain BXU04_00455 PF00263 Bacterial type II and III secretion system protein BXU04_00455 PF03958 Bacterial type II/III secretion system short domain BXU04_00460 PF01311 Bacterial export proteins, family 1 BXU04_00470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BXU04_00470 PF02874 ATP synthase alpha/beta family, beta-barrel domain BXU04_00470 PF18269 T3SS EscN ATPase C-terminal domain BXU04_00485 PF01514 Secretory protein of YscJ/FliF family BXU04_00500 PF01312 FlhB HrpN YscU SpaS Family BXU04_00505 PF00771 FHIPEP family BXU04_00520 PF00813 FliP family BXU04_00525 PF01313 Bacterial export proteins, family 3 BXU04_00570 PF05819 NolX protein BXU04_00600 PF00595 PDZ domain BXU04_00610 PF00512 His Kinase A (phospho-acceptor) domain BXU04_00610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_00610 PF08521 Two-component sensor kinase N-terminal BXU04_00615 PF08338 Domain of unknown function (DUF1731) BXU04_00615 PF01370 NAD dependent epimerase/dehydratase family BXU04_00625 PF05598 Transposase domain (DUF772) BXU04_00625 PF01609 Transposase DDE domain BXU04_00650 PF00665 Integrase core domain BXU04_00650 PF13936 Helix-turn-helix domain BXU04_00670 PF13344 Haloacid dehalogenase-like hydrolase BXU04_00670 PF00293 NUDIX domain BXU04_00705 PF13533 Biotin-lipoyl like BXU04_00710 PF00005 ABC transporter BXU04_00725 PF00665 Integrase core domain BXU04_00725 PF13936 Helix-turn-helix domain BXU04_00735 PF08845 Toxin SymE, type I toxin-antitoxin system BXU04_00750 PF03006 Haemolysin-III related BXU04_00755 PF00271 Helicase conserved C-terminal domain BXU04_00755 PF00270 DEAD/DEAH box helicase BXU04_00755 PF09369 Domain of unknown function (DUF1998) BXU04_00815 PF00310 Glutamine amidotransferases class-II BXU04_00815 PF01493 GXGXG motif BXU04_00815 PF04898 Glutamate synthase central domain BXU04_00815 PF01645 Conserved region in glutamate synthase BXU04_00820 PF07992 Pyridine nucleotide-disulphide oxidoreductase BXU04_00820 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BXU04_00845 PF13936 Helix-turn-helix domain BXU04_00845 PF00665 Integrase core domain BXU04_00870 PF05598 Transposase domain (DUF772) BXU04_00885 PF00356 Bacterial regulatory proteins, lacI family BXU04_00915 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BXU04_00915 PF02806 Alpha amylase, C-terminal all-beta domain BXU04_00915 PF00128 Alpha amylase, catalytic domain BXU04_00920 PF16657 Maltogenic Amylase, C-terminal domain BXU04_00920 PF00128 Alpha amylase, catalytic domain BXU04_00925 PF00128 Alpha amylase, catalytic domain BXU04_00925 PF11896 Domain of unknown function (DUF3416) BXU04_00935 PF13683 Integrase core domain BXU04_00935 PF13276 HTH-like domain BXU04_00950 PF00872 Transposase, Mutator family BXU04_00965 PF05598 Transposase domain (DUF772) BXU04_00980 PF13335 Magnesium chelatase, subunit ChlI C-terminal BXU04_00980 PF01078 Magnesium chelatase, subunit ChlI BXU04_00985 PF04380 Membrane fusogenic activity BXU04_00990 PF00543 Nitrogen regulatory protein P-II BXU04_01025 PF17284 Spermidine synthase tetramerisation domain BXU04_01030 PF17944 Arginine decarboxylase C-terminal helical extension BXU04_01030 PF17810 Arginine decarboxylase helical bundle domain BXU04_01030 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BXU04_01045 PF13296 Putative type VI secretion system Rhs element Vgr BXU04_01045 PF04717 Type VI secretion system, phage-baseplate injector BXU04_01045 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) BXU04_01100 PF13932 GidA associated domain BXU04_01100 PF01134 Glucose inhibited division protein A BXU04_01115 PF00291 Pyridoxal-phosphate dependent enzyme BXU04_01135 PF13649 Methyltransferase domain BXU04_01145 PF12697 Alpha/beta hydrolase family BXU04_01165 PF04349 Periplasmic glucan biosynthesis protein, MdoG BXU04_01175 PF00265 Thymidine kinase BXU04_01180 PF00580 UvrD/REP helicase N-terminal domain BXU04_01180 PF13361 UvrD-like helicase C-terminal domain BXU04_01195 PF04337 Protein of unknown function, DUF480 BXU04_01205 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) BXU04_01210 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BXU04_01215 PF04820 Tryptophan halogenase BXU04_01230 PF00356 Bacterial regulatory proteins, lacI family BXU04_01245 PF01553 Acyltransferase BXU04_01270 PF13276 HTH-like domain BXU04_01275 PF13276 HTH-like domain BXU04_01275 PF13683 Integrase core domain BXU04_01285 PF00657 GDSL-like Lipase/Acylhydrolase BXU04_01300 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BXU04_01305 PF01037 Lrp/AsnC ligand binding domain BXU04_01320 PF05598 Transposase domain (DUF772) BXU04_01350 PF00107 Zinc-binding dehydrogenase BXU04_01350 PF08240 Alcohol dehydrogenase GroES-like domain BXU04_01360 PF00150 Cellulase (glycosyl hydrolase family 5) BXU04_01370 PF00150 Cellulase (glycosyl hydrolase family 5) BXU04_01380 PF00150 Cellulase (glycosyl hydrolase family 5) BXU04_01390 PF02810 SEC-C motif BXU04_01405 PF05598 Transposase domain (DUF772) BXU04_01405 PF01609 Transposase DDE domain BXU04_01410 PF01263 Aldose 1-epimerase BXU04_01420 PF01126 Heme oxygenase BXU04_01425 PF01590 GAF domain BXU04_01425 PF08446 PAS fold BXU04_01425 PF13426 PAS domain BXU04_01425 PF00360 Phytochrome region BXU04_01475 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BXU04_01475 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BXU04_01475 PF06827 Zinc finger found in FPG and IleRS BXU04_01485 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_01495 PF05598 Transposase domain (DUF772) BXU04_01505 PF04333 MlaA lipoprotein BXU04_01515 PF05494 MlaC protein BXU04_01520 PF02470 MlaD protein BXU04_01525 PF02405 Permease MlaE BXU04_01530 PF00005 ABC transporter BXU04_01560 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_01605 PF13276 HTH-like domain BXU04_01605 PF13683 Integrase core domain BXU04_01630 PF01011 PQQ enzyme repeat BXU04_01630 PF13360 PQQ-like domain BXU04_01630 PF13570 PQQ-like domain BXU04_01635 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_01655 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BXU04_01655 PF06165 Glycosyltransferase family 36 BXU04_01670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_01670 PF00512 His Kinase A (phospho-acceptor) domain BXU04_01675 PF02659 Putative manganese efflux pump BXU04_01680 PF01614 Bacterial transcriptional regulator BXU04_01680 PF09339 IclR helix-turn-helix domain BXU04_01685 PF07690 Major Facilitator Superfamily BXU04_01690 PF05336 L-rhamnose mutarotase BXU04_01720 PF01432 Peptidase family M3 BXU04_01740 PF00472 RF-1 domain BXU04_01750 PF00849 RNA pseudouridylate synthase BXU04_01760 PF03109 ABC1 family BXU04_01815 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_01880 PF08546 Ketopantoate reductase PanE/ApbA C terminal BXU04_01880 PF02558 Ketopantoate reductase PanE/ApbA BXU04_01890 PF01061 ABC-2 type transporter BXU04_01895 PF00005 ABC transporter BXU04_01900 PF00175 Oxidoreductase NAD-binding domain BXU04_01900 PF01383 CpcD/allophycocyanin linker domain BXU04_01905 PF01545 Cation efflux family BXU04_01910 PF02583 Metal-sensitive transcriptional repressor BXU04_01920 PF01381 Helix-turn-helix BXU04_01930 PF00005 ABC transporter BXU04_01945 PF04820 Tryptophan halogenase BXU04_01965 PF02798 Glutathione S-transferase, N-terminal domain BXU04_01965 PF00043 Glutathione S-transferase, C-terminal domain BXU04_01970 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BXU04_01970 PF00326 Prolyl oligopeptidase family BXU04_01995 PF00490 Delta-aminolevulinic acid dehydratase BXU04_02015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU04_02015 PF03466 LysR substrate binding domain BXU04_02025 PF00667 FAD binding domain BXU04_02025 PF00258 Flavodoxin BXU04_02025 PF00175 Oxidoreductase NAD-binding domain BXU04_02040 PF01488 Shikimate / quinate 5-dehydrogenase BXU04_02040 PF08501 Shikimate dehydrogenase substrate binding domain BXU04_02040 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BXU04_02050 PF06733 DEAD_2 BXU04_02050 PF13307 Helicase C-terminal domain BXU04_02070 PF13533 Biotin-lipoyl like BXU04_02080 PF00199 Catalase BXU04_02080 PF06628 Catalase-related immune-responsive BXU04_02105 PF01207 Dihydrouridine synthase (Dus) BXU04_02115 PF00486 Transcriptional regulatory protein, C terminal BXU04_02115 PF00072 Response regulator receiver domain BXU04_02120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_02135 PF06167 Glucose-regulated metallo-peptidase M90 BXU04_02150 PF08279 HTH domain BXU04_02150 PF03099 Biotin/lipoate A/B protein ligase family BXU04_02150 PF02237 Biotin protein ligase C terminal domain BXU04_02155 PF03309 Type III pantothenate kinase BXU04_02170 PF02223 Thymidylate kinase BXU04_02195 PF00491 Arginase family BXU04_02210 PF05532 CsbD-like BXU04_02215 PF00579 tRNA synthetases class I (W and Y) BXU04_02220 PF00753 Metallo-beta-lactamase superfamily BXU04_02250 PF00892 EamA-like transporter family BXU04_02270 PF00199 Catalase BXU04_02275 PF08281 Sigma-70, region 4 BXU04_02275 PF04542 Sigma-70 region 2 BXU04_02285 PF00883 Cytosol aminopeptidase family, catalytic domain BXU04_02285 PF02789 Cytosol aminopeptidase family, N-terminal domain BXU04_02295 PF01594 AI-2E family transporter BXU04_02310 PF01040 UbiA prenyltransferase family BXU04_02320 PF04055 Radical SAM superfamily BXU04_02320 PF06968 Biotin and Thiamin Synthesis associated domain BXU04_02325 PF00155 Aminotransferase class I and II BXU04_02355 PF00535 Glycosyl transferase family 2 BXU04_02365 PF00109 Beta-ketoacyl synthase, N-terminal domain BXU04_02365 PF02801 Beta-ketoacyl synthase, C-terminal domain BXU04_02370 PF05166 YcgL domain BXU04_02385 PF00723 Glycosyl hydrolases family 15 BXU04_02390 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BXU04_02390 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BXU04_02400 PF00999 Sodium/hydrogen exchanger family BXU04_02400 PF02254 TrkA-N domain BXU04_02405 PF01769 Divalent cation transporter BXU04_02405 PF03448 MgtE intracellular N domain BXU04_02405 PF00571 CBS domain BXU04_02415 PF00583 Acetyltransferase (GNAT) family BXU04_02415 PF13380 CoA binding domain BXU04_02415 PF13607 Succinyl-CoA ligase like flavodoxin domain BXU04_02425 PF03477 ATP cone domain BXU04_02425 PF02867 Ribonucleotide reductase, barrel domain BXU04_02425 PF00317 Ribonucleotide reductase, all-alpha domain BXU04_02435 PF00268 Ribonucleotide reductase, small chain BXU04_02460 PF13276 HTH-like domain BXU04_02475 PF02803 Thiolase, C-terminal domain BXU04_02475 PF00108 Thiolase, N-terminal domain BXU04_02480 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal BXU04_02480 PF00775 Dioxygenase BXU04_02495 PF10397 Adenylosuccinate lyase C-terminus BXU04_02495 PF00206 Lyase BXU04_02500 PF12146 Serine aminopeptidase, S33 BXU04_02505 PF02627 Carboxymuconolactone decarboxylase family BXU04_02515 PF01614 Bacterial transcriptional regulator BXU04_02515 PF09339 IclR helix-turn-helix domain BXU04_02530 PF00106 short chain dehydrogenase BXU04_02545 PF05746 DALR anticodon binding domain BXU04_02545 PF00750 tRNA synthetases class I (R) BXU04_02545 PF03485 Arginyl tRNA synthetase N terminal domain BXU04_02550 PF04002 RadC-like JAB domain BXU04_02555 PF02441 Flavoprotein BXU04_02555 PF04127 DNA / pantothenate metabolism flavoprotein BXU04_02560 PF00692 dUTPase BXU04_02565 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BXU04_02565 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BXU04_02565 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BXU04_02565 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BXU04_02580 PF00535 Glycosyl transferase family 2 BXU04_02585 PF01370 NAD dependent epimerase/dehydratase family BXU04_02595 PF17762 HTH domain found in ParB protein BXU04_02595 PF02195 ParB-like nuclease domain BXU04_02600 PF13614 AAA domain BXU04_02610 PF00156 Phosphoribosyl transferase domain BXU04_02615 PF03372 Endonuclease/Exonuclease/phosphatase family BXU04_02620 PF07690 Major Facilitator Superfamily BXU04_02630 PF03702 Anhydro-N-acetylmuramic acid kinase BXU04_02635 PF01551 Peptidase family M23 BXU04_02635 PF04225 Opacity-associated protein A LysM-like domain BXU04_02640 PF00579 tRNA synthetases class I (W and Y) BXU04_02680 PF00072 Response regulator receiver domain BXU04_02680 PF01627 Hpt domain BXU04_02680 PF00512 His Kinase A (phospho-acceptor) domain BXU04_02680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_02680 PF00672 HAMP domain BXU04_02680 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BXU04_02685 PF00072 Response regulator receiver domain BXU04_02685 PF00486 Transcriptional regulatory protein, C terminal BXU04_02710 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_02720 PF01521 Iron-sulphur cluster biosynthesis BXU04_02730 PF00293 NUDIX domain BXU04_02730 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain BXU04_02730 PF09297 NADH pyrophosphatase zinc ribbon domain BXU04_02735 PF03186 CobD/Cbib protein BXU04_02735 PF17113 Regulatory signalling modulator protein AmpE BXU04_02755 PF07690 Major Facilitator Superfamily BXU04_02770 PF12805 FUSC-like inner membrane protein yccS BXU04_02780 PF02687 FtsX-like permease family BXU04_02780 PF12704 MacB-like periplasmic core domain BXU04_02780 PF00005 ABC transporter BXU04_02785 PF02844 Phosphoribosylglycinamide synthetase, N domain BXU04_02785 PF02843 Phosphoribosylglycinamide synthetase, C domain BXU04_02785 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BXU04_02795 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system BXU04_02800 PF02142 MGS-like domain BXU04_02800 PF01808 AICARFT/IMPCHase bienzyme BXU04_02810 PF12146 Serine aminopeptidase, S33 BXU04_02810 PF12147 Putative methyltransferase BXU04_02820 PF12146 Serine aminopeptidase, S33 BXU04_02820 PF12147 Putative methyltransferase BXU04_02825 PF00782 Dual specificity phosphatase, catalytic domain BXU04_02840 PF02954 Bacterial regulatory protein, Fis family BXU04_02855 PF01381 Helix-turn-helix BXU04_02895 PF02785 Biotin carboxylase C-terminal domain BXU04_02895 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BXU04_02895 PF00289 Biotin carboxylase, N-terminal domain BXU04_02905 PF00364 Biotin-requiring enzyme BXU04_02910 PF01220 Dehydroquinase class II BXU04_02920 PF02683 Cytochrome C biogenesis protein transmembrane region BXU04_02920 PF11412 Disulphide bond corrector protein DsbC BXU04_02925 PF03091 CutA1 divalent ion tolerance protein BXU04_02955 PF17764 3′ DNA-binding domain (3′BD) BXU04_02955 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BXU04_02955 PF00271 Helicase conserved C-terminal domain BXU04_02955 PF18074 Primosomal protein N C-terminal domain BXU04_02955 PF00270 DEAD/DEAH box helicase BXU04_02980 PF01554 MatE BXU04_02985 PF01343 Peptidase family S49 BXU04_03010 PF01300 Telomere recombination BXU04_03015 PF01131 DNA topoisomerase BXU04_03015 PF01751 Toprim domain BXU04_03015 PF13368 Topoisomerase C-terminal repeat BXU04_03025 PF07963 Prokaryotic N-terminal methylation motif BXU04_03025 PF00114 Pilin (bacterial filament) BXU04_03030 PF04361 Protein of unknown function (DUF494) BXU04_03035 PF02481 DNA recombination-mediator protein A BXU04_03035 PF17782 DprA winged helix domain BXU04_03040 PF01476 LysM domain BXU04_03045 PF01327 Polypeptide deformylase BXU04_03050 PF02911 Formyl transferase, C-terminal domain BXU04_03050 PF00551 Formyl transferase BXU04_03055 PF01029 NusB family BXU04_03055 PF01189 16S rRNA methyltransferase RsmB/F BXU04_03070 PF00535 Glycosyl transferase family 2 BXU04_03090 PF00925 GTP cyclohydrolase II BXU04_03105 PF03279 Bacterial lipid A biosynthesis acyltransferase BXU04_03110 PF02580 D-Tyr-tRNA(Tyr) deacylase BXU04_03115 PF04546 Sigma-70, non-essential region BXU04_03115 PF03979 Sigma-70 factor, region 1.1 BXU04_03115 PF00140 Sigma-70 factor, region 1.2 BXU04_03115 PF04542 Sigma-70 region 2 BXU04_03115 PF04539 Sigma-70 region 3 BXU04_03115 PF04545 Sigma-70, region 4 BXU04_03135 PF00589 Phage integrase family BXU04_03155 PF07996 Type IV secretion system proteins BXU04_03170 PF04610 TrbL/VirB6 plasmid conjugal transfer protein BXU04_03185 PF03852 DNA mismatch endonuclease Vsr BXU04_03190 PF00145 C-5 cytosine-specific DNA methylase BXU04_03235 PF13276 HTH-like domain BXU04_03240 PF13683 Integrase core domain BXU04_03240 PF13276 HTH-like domain BXU04_03280 PF00005 ABC transporter BXU04_03295 PF07715 TonB-dependent Receptor Plug Domain BXU04_03295 PF00593 TonB dependent receptor BXU04_03335 PF08240 Alcohol dehydrogenase GroES-like domain BXU04_03335 PF13823 Alcohol dehydrogenase GroES-associated BXU04_03335 PF00107 Zinc-binding dehydrogenase BXU04_03355 PF02322 Cytochrome bd terminal oxidase subunit II BXU04_03360 PF01654 Cytochrome bd terminal oxidase subunit I BXU04_03375 PF00158 Sigma-54 interaction domain BXU04_03375 PF00072 Response regulator receiver domain BXU04_03375 PF02954 Bacterial regulatory protein, Fis family BXU04_03390 PF01339 CheB methylesterase BXU04_03390 PF01739 CheR methyltransferase, SAM binding domain BXU04_03390 PF03705 CheR methyltransferase, all-alpha domain BXU04_03390 PF08448 PAS fold BXU04_03410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_03410 PF06580 Histidine kinase BXU04_03410 PF02743 Cache domain BXU04_03410 PF00672 HAMP domain BXU04_03425 PF13520 Amino acid permease BXU04_03445 PF01431 Peptidase family M13 BXU04_03445 PF05649 Peptidase family M13 BXU04_03460 PF00248 Aldo/keto reductase family BXU04_03465 PF03358 NADPH-dependent FMN reductase BXU04_03475 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BXU04_03485 PF03167 Uracil DNA glycosylase superfamily BXU04_03495 PF02469 Fasciclin domain BXU04_03510 PF00999 Sodium/hydrogen exchanger family BXU04_03515 PF00005 ABC transporter BXU04_03520 PF01061 ABC-2 type transporter BXU04_03540 PF04151 Bacterial pre-peptidase C-terminal domain BXU04_03540 PF00082 Subtilase family BXU04_03550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_03550 PF00512 His Kinase A (phospho-acceptor) domain BXU04_03550 PF08448 PAS fold BXU04_03550 PF13188 PAS domain BXU04_03550 PF00072 Response regulator receiver domain BXU04_03555 PF00072 Response regulator receiver domain BXU04_03555 PF00486 Transcriptional regulatory protein, C terminal BXU04_03575 PF13677 Membrane MotB of proton-channel complex MotA/MotB BXU04_03575 PF00691 OmpA family BXU04_03580 PF01618 MotA/TolQ/ExbB proton channel family BXU04_03590 PF01641 SelR domain BXU04_03600 PF01037 Lrp/AsnC ligand binding domain BXU04_03605 PF01266 FAD dependent oxidoreductase BXU04_03610 PF00842 Alanine racemase, C-terminal domain BXU04_03610 PF01168 Alanine racemase, N-terminal domain BXU04_03630 PF00989 PAS fold BXU04_03630 PF00512 His Kinase A (phospho-acceptor) domain BXU04_03630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_03645 PF07995 Glucose / Sorbosone dehydrogenase BXU04_03665 PF05175 Methyltransferase small domain BXU04_03665 PF08468 Methyltransferase small domain N-terminal BXU04_03670 PF00849 RNA pseudouridylate synthase BXU04_03670 PF01479 S4 domain BXU04_03675 PF13419 Haloacid dehalogenase-like hydrolase BXU04_03705 PF04461 Protein of unknown function (DUF520) BXU04_03710 PF00892 EamA-like transporter family BXU04_03715 PF09383 NIL domain BXU04_03715 PF00005 ABC transporter BXU04_03720 PF00528 Binding-protein-dependent transport system inner membrane component BXU04_03725 PF03180 NLPA lipoprotein BXU04_03750 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BXU04_03750 PF00364 Biotin-requiring enzyme BXU04_03750 PF02817 e3 binding domain BXU04_03760 PF07992 Pyridine nucleotide-disulphide oxidoreductase BXU04_03760 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BXU04_03780 PF00119 ATP synthase A chain BXU04_03785 PF00137 ATP synthase subunit C BXU04_03790 PF00430 ATP synthase B/B' CF(0) BXU04_03795 PF00213 ATP synthase delta (OSCP) subunit BXU04_03800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BXU04_03800 PF00306 ATP synthase alpha/beta chain, C terminal domain BXU04_03800 PF02874 ATP synthase alpha/beta family, beta-barrel domain BXU04_03805 PF00231 ATP synthase BXU04_03810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BXU04_03810 PF02874 ATP synthase alpha/beta family, beta-barrel domain BXU04_03815 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BXU04_03820 PF01817 Chorismate mutase type II BXU04_03835 PF00132 Bacterial transferase hexapeptide (six repeats) BXU04_03835 PF12804 MobA-like NTP transferase domain BXU04_03835 PF14602 Hexapeptide repeat of succinyl-transferase BXU04_03870 PF00005 ABC transporter BXU04_03870 PF08402 TOBE domain BXU04_03875 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BXU04_03880 PF01380 SIS domain BXU04_03895 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_03915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BXU04_03920 PF05275 Copper resistance protein B precursor (CopB) BXU04_03925 PF00394 Multicopper oxidase BXU04_03925 PF07731 Multicopper oxidase BXU04_03925 PF07732 Multicopper oxidase BXU04_03940 PF01432 Peptidase family M3 BXU04_03950 PF02801 Beta-ketoacyl synthase, C-terminal domain BXU04_03950 PF00109 Beta-ketoacyl synthase, N-terminal domain BXU04_03955 PF07977 FabA-like domain BXU04_03965 PF00817 impB/mucB/samB family BXU04_03965 PF11799 impB/mucB/samB family C-terminal domain BXU04_03970 PF13419 Haloacid dehalogenase-like hydrolase BXU04_03980 PF13185 GAF domain BXU04_03995 PF01242 6-pyruvoyl tetrahydropterin synthase BXU04_04005 PF00271 Helicase conserved C-terminal domain BXU04_04005 PF00270 DEAD/DEAH box helicase BXU04_04020 PF13417 Glutathione S-transferase, N-terminal domain BXU04_04025 PF00437 Type II/IV secretion system protein BXU04_04045 PF00291 Pyridoxal-phosphate dependent enzyme BXU04_04045 PF00571 CBS domain BXU04_04050 PF01053 Cys/Met metabolism PLP-dependent enzyme BXU04_04060 PF01370 NAD dependent epimerase/dehydratase family BXU04_04090 PF00872 Transposase, Mutator family BXU04_04100 PF00005 ABC transporter BXU04_04110 PF01012 Electron transfer flavoprotein domain BXU04_04110 PF00766 Electron transfer flavoprotein FAD-binding domain BXU04_04115 PF01012 Electron transfer flavoprotein domain BXU04_04120 PF16363 GDP-mannose 4,6 dehydratase BXU04_04125 PF00483 Nucleotidyl transferase BXU04_04130 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BXU04_04135 PF04321 RmlD substrate binding domain BXU04_04140 PF01050 Mannose-6-phosphate isomerase BXU04_04140 PF00483 Nucleotidyl transferase BXU04_04145 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BXU04_04145 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BXU04_04145 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BXU04_04145 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BXU04_04150 PF01144 Coenzyme A transferase BXU04_04155 PF01144 Coenzyme A transferase BXU04_04160 PF14307 Glycosyltransferase WbsX BXU04_04160 PF05045 Rhamnan synthesis protein F BXU04_04185 PF03886 ABC-type transport auxiliary lipoprotein component BXU04_04185 PF02470 MlaD protein BXU04_04190 PF00005 ABC transporter BXU04_04195 PF02405 Permease MlaE BXU04_04205 PF00816 H-NS histone family BXU04_04210 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BXU04_04210 PF04073 Aminoacyl-tRNA editing domain BXU04_04210 PF03129 Anticodon binding domain BXU04_04220 PF01066 CDP-alcohol phosphatidyltransferase BXU04_04245 PF05598 Transposase domain (DUF772) BXU04_04245 PF01609 Transposase DDE domain BXU04_04255 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain BXU04_04255 PF01464 Transglycosylase SLT domain BXU04_04290 PF13276 HTH-like domain BXU04_04290 PF13683 Integrase core domain BXU04_04295 PF01527 Transposase BXU04_04310 PF10458 Valyl tRNA synthetase tRNA binding arm BXU04_04310 PF08264 Anticodon-binding domain of tRNA BXU04_04310 PF00133 tRNA synthetases class I (I, L, M and V) BXU04_04325 PF00883 Cytosol aminopeptidase family, catalytic domain BXU04_04325 PF02789 Cytosol aminopeptidase family, N-terminal domain BXU04_04335 PF03739 Lipopolysaccharide export system permease LptF/LptG BXU04_04350 PF02899 Phage integrase, N-terminal SAM-like domain BXU04_04350 PF00589 Phage integrase family BXU04_04355 PF10411 Disulfide bond isomerase protein N-terminus BXU04_04355 PF13098 Thioredoxin-like domain BXU04_04365 PF02769 AIR synthase related protein, C-terminal domain BXU04_04365 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BXU04_04365 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BXU04_04375 PF05658 Head domain of trimeric autotransporter adhesin BXU04_04375 PF13018 Extended Signal Peptide of Type V secretion system BXU04_04375 PF03895 YadA-like membrane anchor domain BXU04_04375 PF05662 Coiled stalk of trimeric autotransporter adhesin BXU04_04390 PF00082 Subtilase family BXU04_04390 PF04151 Bacterial pre-peptidase C-terminal domain BXU04_04395 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BXU04_04395 PF00437 Type II/IV secretion system protein BXU04_04405 PF00482 Type II secretion system (T2SS), protein F BXU04_04410 PF08334 Type II secretion system (T2SS), protein G BXU04_04415 PF12019 Type II transport protein GspH BXU04_04420 PF07963 Prokaryotic N-terminal methylation motif BXU04_04430 PF03934 Type II secretion system (T2SS), protein K BXU04_04435 PF05137 Fimbrial assembly protein (PilN) BXU04_04440 PF10741 Type II secretion system (T2SS), protein M subtype b BXU04_04450 PF03958 Bacterial type II/III secretion system short domain BXU04_04450 PF00263 Bacterial type II and III secretion system protein BXU04_04465 PF00392 Bacterial regulatory proteins, gntR family BXU04_04465 PF07702 UTRA domain BXU04_04480 PF07715 TonB-dependent Receptor Plug Domain BXU04_04480 PF00593 TonB dependent receptor BXU04_04510 PF09827 CRISPR associated protein Cas2 BXU04_04515 PF01867 CRISPR associated protein Cas1 BXU04_04535 PF09704 CRISPR-associated protein (Cas_Cas5) BXU04_04555 PF02545 Maf-like protein BXU04_04560 PF02620 Large ribosomal RNA subunit accumulation protein YceD BXU04_04565 PF01783 Ribosomal L32p protein family BXU04_04570 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BXU04_04570 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BXU04_04580 PF00698 Acyl transferase domain BXU04_04590 PF00550 Phosphopantetheine attachment site BXU04_04595 PF00109 Beta-ketoacyl synthase, N-terminal domain BXU04_04595 PF02801 Beta-ketoacyl synthase, C-terminal domain BXU04_04600 PF04715 Anthranilate synthase component I, N terminal region BXU04_04600 PF00425 chorismate binding enzyme BXU04_04605 PF02618 YceG-like family BXU04_04610 PF09115 DNA polymerase III, delta subunit, C terminal BXU04_04630 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_04645 PF00158 Sigma-54 interaction domain BXU04_04645 PF06506 Propionate catabolism activator BXU04_04645 PF02954 Bacterial regulatory protein, Fis family BXU04_04655 PF00285 Citrate synthase, C-terminal domain BXU04_04660 PF00330 Aconitase family (aconitate hydratase) BXU04_04660 PF00694 Aconitase C-terminal domain BXU04_04670 PF04303 PrpF protein BXU04_04675 PF05598 Transposase domain (DUF772) BXU04_04675 PF01609 Transposase DDE domain BXU04_04680 PF07715 TonB-dependent Receptor Plug Domain BXU04_04680 PF00593 TonB dependent receptor BXU04_04725 PF13936 Helix-turn-helix domain BXU04_04725 PF00665 Integrase core domain BXU04_04735 PF08534 Redoxin BXU04_04745 PF00226 DnaJ domain BXU04_04745 PF01556 DnaJ C terminal domain BXU04_04750 PF00072 Response regulator receiver domain BXU04_04755 PF01145 SPFH domain / Band 7 family BXU04_04755 PF12221 Bacterial membrane protein N terminal BXU04_04760 PF01145 SPFH domain / Band 7 family BXU04_04770 PF00709 Adenylosuccinate synthetase BXU04_04775 PF11838 ERAP1-like C-terminal domain BXU04_04775 PF01433 Peptidase family M1 domain BXU04_04785 PF05598 Transposase domain (DUF772) BXU04_04810 PF01609 Transposase DDE domain BXU04_04810 PF05598 Transposase domain (DUF772) BXU04_04830 PF03279 Bacterial lipid A biosynthesis acyltransferase BXU04_04835 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BXU04_04840 PF02321 Outer membrane efflux protein BXU04_04865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU04_04870 PF00330 Aconitase family (aconitate hydratase) BXU04_04875 PF00694 Aconitase C-terminal domain BXU04_04885 PF00180 Isocitrate/isopropylmalate dehydrogenase BXU04_04890 PF00682 HMGL-like BXU04_04890 PF08502 LeuA allosteric (dimerisation) domain BXU04_04895 PF00291 Pyridoxal-phosphate dependent enzyme BXU04_04905 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BXU04_04905 PF00205 Thiamine pyrophosphate enzyme, central domain BXU04_04905 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BXU04_04910 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BXU04_04910 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BXU04_04920 PF01964 Radical SAM ThiC family BXU04_04920 PF13667 ThiC-associated domain BXU04_04925 PF00486 Transcriptional regulatory protein, C terminal BXU04_04925 PF18500 CadC C-terminal domain 1 BXU04_04930 PF12833 Helix-turn-helix domain BXU04_04935 PF00593 TonB dependent receptor BXU04_04935 PF07715 TonB-dependent Receptor Plug Domain BXU04_04950 PF00719 Inorganic pyrophosphatase BXU04_04985 PF00365 Phosphofructokinase BXU04_04995 PF01225 Mur ligase family, catalytic domain BXU04_04995 PF02875 Mur ligase family, glutamate ligase domain BXU04_04995 PF08245 Mur ligase middle domain BXU04_05005 PF01062 Bestrophin, RFP-TM, chloride channel BXU04_05025 PF02798 Glutathione S-transferase, N-terminal domain BXU04_05025 PF00043 Glutathione S-transferase, C-terminal domain BXU04_05030 PF00056 lactate/malate dehydrogenase, NAD binding domain BXU04_05030 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BXU04_05035 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BXU04_05040 PF00679 Elongation factor G C-terminus BXU04_05040 PF03144 Elongation factor Tu domain 2 BXU04_05040 PF00009 Elongation factor Tu GTP binding domain BXU04_05060 PF01474 Class-II DAHP synthetase family BXU04_05070 PF02600 Disulfide bond formation protein DsbB BXU04_05080 PF01527 Transposase BXU04_05085 PF13683 Integrase core domain BXU04_05085 PF13276 HTH-like domain BXU04_05115 PF13276 HTH-like domain BXU04_05115 PF13683 Integrase core domain BXU04_05145 PF05598 Transposase domain (DUF772) BXU04_05195 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_05215 PF01609 Transposase DDE domain BXU04_05215 PF05598 Transposase domain (DUF772) BXU04_05235 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_05240 PF03009 Glycerophosphoryl diester phosphodiesterase family BXU04_05270 PF18324 Hypothetical protein TT1725 BXU04_05270 PF00180 Isocitrate/isopropylmalate dehydrogenase BXU04_05325 PF05697 Bacterial trigger factor protein (TF) BXU04_05325 PF05698 Bacterial trigger factor protein (TF) C-terminus BXU04_05330 PF00574 Clp protease BXU04_05335 PF10431 C-terminal, D2-small domain, of ClpB protein BXU04_05335 PF06689 ClpX C4-type zinc finger BXU04_05335 PF07724 AAA domain (Cdc48 subfamily) BXU04_05340 PF00004 ATPase family associated with various cellular activities (AAA) BXU04_05340 PF05362 Lon protease (S16) C-terminal proteolytic domain BXU04_05340 PF02190 ATP-dependent protease La (LON) substrate-binding domain BXU04_05345 PF00216 Bacterial DNA-binding protein BXU04_05370 PF05257 CHAP domain BXU04_05370 PF01476 LysM domain BXU04_05375 PF00753 Metallo-beta-lactamase superfamily BXU04_05375 PF16123 Hydroxyacylglutathione hydrolase C-terminus BXU04_05385 PF00075 RNase H BXU04_05390 PF00929 Exonuclease BXU04_05425 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) BXU04_05425 PF04717 Type VI secretion system, phage-baseplate injector BXU04_05425 PF13296 Putative type VI secretion system Rhs element Vgr BXU04_05470 PF00589 Phage integrase family BXU04_05470 PF13356 Arm DNA-binding domain BXU04_05480 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BXU04_05490 PF00753 Metallo-beta-lactamase superfamily BXU04_05490 PF12706 Beta-lactamase superfamily domain BXU04_05495 PF06463 Molybdenum Cofactor Synthesis C BXU04_05495 PF04055 Radical SAM superfamily BXU04_05505 PF01967 MoaC family BXU04_05510 PF02597 ThiS family BXU04_05515 PF02391 MoaE protein BXU04_05530 PF12170 DNA polymerase III tau subunit V interacting with alpha BXU04_05530 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BXU04_05530 PF12169 DNA polymerase III subunits gamma and tau domain III BXU04_05535 PF02575 YbaB/EbfC DNA-binding family BXU04_05540 PF02132 RecR protein BXU04_05540 PF13662 Toprim domain BXU04_05545 PF01230 HIT domain BXU04_05555 PF01841 Transglutaminase-like superfamily BXU04_05555 PF11992 Domain of unknown function (DUF3488) BXU04_05555 PF13559 Domain of unknown function (DUF4129) BXU04_05565 PF17863 AAA lid domain BXU04_05565 PF07726 ATPase family associated with various cellular activities (AAA) BXU04_05585 PF01327 Polypeptide deformylase BXU04_05635 PF01609 Transposase DDE domain BXU04_05635 PF05598 Transposase domain (DUF772) BXU04_05660 PF00462 Glutaredoxin BXU04_05665 PF01522 Polysaccharide deacetylase BXU04_05685 PF00155 Aminotransferase class I and II BXU04_05690 PF03193 RsgA GTPase BXU04_05705 PF00128 Alpha amylase, catalytic domain BXU04_05725 PF00356 Bacterial regulatory proteins, lacI family BXU04_05730 PF00106 short chain dehydrogenase BXU04_05735 PF03600 Citrate transporter BXU04_05745 PF00072 Response regulator receiver domain BXU04_05745 PF00486 Transcriptional regulatory protein, C terminal BXU04_05750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_05750 PF08521 Two-component sensor kinase N-terminal BXU04_05750 PF00512 His Kinase A (phospho-acceptor) domain BXU04_05760 PF00196 Bacterial regulatory proteins, luxR family BXU04_05760 PF00072 Response regulator receiver domain BXU04_05775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU04_05775 PF03466 LysR substrate binding domain BXU04_05785 PF07690 Major Facilitator Superfamily BXU04_05790 PF00512 His Kinase A (phospho-acceptor) domain BXU04_05790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_05805 PF00375 Sodium:dicarboxylate symporter family BXU04_05810 PF00390 Malic enzyme, N-terminal domain BXU04_05810 PF03949 Malic enzyme, NAD binding domain BXU04_05810 PF01515 Phosphate acetyl/butaryl transferase BXU04_05830 PF13683 Integrase core domain BXU04_05830 PF13276 HTH-like domain BXU04_05835 PF13276 HTH-like domain BXU04_05835 PF00665 Integrase core domain BXU04_05835 PF13333 Integrase core domain BXU04_05845 PF02581 Thiamine monophosphate synthase BXU04_05850 PF00301 Rubredoxin BXU04_05855 PF13369 Transglutaminase-like superfamily BXU04_05865 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BXU04_05875 PF01812 5-formyltetrahydrofolate cyclo-ligase family BXU04_05885 PF05164 Cell division protein ZapA BXU04_05895 PF03695 Uncharacterised protein family (UPF0149) BXU04_05900 PF05195 Aminopeptidase P, N-terminal domain BXU04_05900 PF00557 Metallopeptidase family M24 BXU04_05915 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_05925 PF00557 Metallopeptidase family M24 BXU04_05940 PF06969 HemN C-terminal domain BXU04_05940 PF04055 Radical SAM superfamily BXU04_05945 PF01725 Ham1 family BXU04_05955 PF01138 3' exoribonuclease family, domain 1 BXU04_05955 PF03725 3' exoribonuclease family, domain 2 BXU04_05960 PF08340 Domain of unknown function (DUF1732) BXU04_05960 PF03755 YicC-like family, N-terminal region BXU04_05965 PF00625 Guanylate kinase BXU04_05985 PF01192 RNA polymerase Rpb6 BXU04_05990 PF02824 TGS domain BXU04_05990 PF13291 ACT domain BXU04_05990 PF04607 Region found in RelA / SpoT proteins BXU04_05995 PF01042 Endoribonuclease L-PSP BXU04_06000 PF00270 DEAD/DEAH box helicase BXU04_06000 PF00271 Helicase conserved C-terminal domain BXU04_06000 PF17191 RecG wedge domain BXU04_06005 PF01156 Inosine-uridine preferring nucleoside hydrolase BXU04_06010 PF01197 Ribosomal protein L31 BXU04_06015 PF00285 Citrate synthase, C-terminal domain BXU04_06030 PF00912 Transglycosylase BXU04_06030 PF17092 Penicillin-binding protein OB-like domain BXU04_06030 PF00905 Penicillin binding protein transpeptidase domain BXU04_06035 PF11104 Type IV pilus assembly protein PilM; BXU04_06040 PF05137 Fimbrial assembly protein (PilN) BXU04_06045 PF04350 Pilus assembly protein, PilO BXU04_06050 PF04351 Pilus assembly protein, PilP BXU04_06055 PF11741 AMIN domain BXU04_06055 PF03958 Bacterial type II/III secretion system short domain BXU04_06055 PF07660 Secretin and TonB N terminus short domain BXU04_06055 PF00263 Bacterial type II and III secretion system protein BXU04_06085 PF07726 ATPase family associated with various cellular activities (AAA) BXU04_06085 PF17863 AAA lid domain BXU04_06105 PF07584 Aerotolerance regulator N-terminal BXU04_06105 PF00092 von Willebrand factor type A domain BXU04_06125 PF00375 Sodium:dicarboxylate symporter family BXU04_06130 PF00456 Transketolase, thiamine diphosphate binding domain BXU04_06130 PF02779 Transketolase, pyrimidine binding domain BXU04_06130 PF02780 Transketolase, C-terminal domain BXU04_06135 PF07715 TonB-dependent Receptor Plug Domain BXU04_06135 PF00593 TonB dependent receptor BXU04_06140 PF01551 Peptidase family M23 BXU04_06140 PF04225 Opacity-associated protein A LysM-like domain BXU04_06145 PF01476 LysM domain BXU04_06145 PF03734 L,D-transpeptidase catalytic domain BXU04_06170 PF00501 AMP-binding enzyme BXU04_06195 PF00072 Response regulator receiver domain BXU04_06195 PF00486 Transcriptional regulatory protein, C terminal BXU04_06200 PF08521 Two-component sensor kinase N-terminal BXU04_06200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_06200 PF00512 His Kinase A (phospho-acceptor) domain BXU04_06220 PF00005 ABC transporter BXU04_06220 PF03459 TOBE domain BXU04_06225 PF00528 Binding-protein-dependent transport system inner membrane component BXU04_06235 PF00753 Metallo-beta-lactamase superfamily BXU04_06235 PF04273 Putative phosphatase (DUF442) BXU04_06270 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BXU04_06270 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BXU04_06280 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_06295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_06295 PF00512 His Kinase A (phospho-acceptor) domain BXU04_06295 PF00672 HAMP domain BXU04_06300 PF00072 Response regulator receiver domain BXU04_06300 PF00486 Transcriptional regulatory protein, C terminal BXU04_06310 PF08443 RimK-like ATP-grasp domain BXU04_06310 PF18030 RimK PreATP-grasp domain BXU04_06355 PF00027 Cyclic nucleotide-binding domain BXU04_06355 PF00520 Ion transport protein BXU04_06360 PF00202 Aminotransferase class-III BXU04_06375 PF01593 Flavin containing amine oxidoreductase BXU04_06380 PF00034 Cytochrome c BXU04_06380 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BXU04_06395 PF00127 Copper binding proteins, plastocyanin/azurin family BXU04_06405 PF00202 Aminotransferase class-III BXU04_06425 PF00665 Integrase core domain BXU04_06425 PF13276 HTH-like domain BXU04_06425 PF13333 Integrase core domain BXU04_06435 PF03377 TAL effector repeat BXU04_06470 PF03377 TAL effector repeat BXU04_06485 PF03377 TAL effector repeat BXU04_06505 PF01208 Uroporphyrinogen decarboxylase (URO-D) BXU04_06515 PF01761 3-dehydroquinate synthase BXU04_06520 PF01202 Shikimate kinase BXU04_06525 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BXU04_06525 PF01243 Pyridoxamine 5'-phosphate oxidase BXU04_06535 PF04012 PspA/IM30 family BXU04_06560 PF03738 Glutathionylspermidine synthase preATP-grasp BXU04_06590 PF00376 MerR family regulatory protein BXU04_06590 PF09278 MerR, DNA binding BXU04_06620 PF04820 Tryptophan halogenase BXU04_06625 PF12706 Beta-lactamase superfamily domain BXU04_06645 PF00324 Amino acid permease BXU04_06650 PF00196 Bacterial regulatory proteins, luxR family BXU04_06655 PF00561 alpha/beta hydrolase fold BXU04_06665 PF00324 Amino acid permease BXU04_06680 PF01654 Cytochrome bd terminal oxidase subunit I BXU04_06685 PF02322 Cytochrome bd terminal oxidase subunit II BXU04_06690 PF00756 Putative esterase BXU04_06695 PF00571 CBS domain BXU04_06695 PF01769 Divalent cation transporter BXU04_06695 PF03448 MgtE intracellular N domain BXU04_06705 PF05524 PEP-utilising enzyme, N-terminal BXU04_06705 PF02896 PEP-utilising enzyme, TIM barrel domain BXU04_06705 PF00391 PEP-utilising enzyme, mobile domain BXU04_06710 PF00381 PTS HPr component phosphorylation site BXU04_06720 PF03668 P-loop ATPase protein family BXU04_06725 PF07475 HPr Serine kinase C-terminal domain BXU04_06725 PF02603 HPr Serine kinase N terminus BXU04_06730 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BXU04_06735 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BXU04_06740 PF04552 Sigma-54, DNA binding domain BXU04_06740 PF04963 Sigma-54 factor, core binding domain BXU04_06740 PF00309 Sigma-54 factor, Activator interacting domain (AID) BXU04_06745 PF00005 ABC transporter BXU04_06750 PF03968 OstA-like protein BXU04_06765 PF00571 CBS domain BXU04_06765 PF01380 SIS domain BXU04_06770 PF01722 BolA-like protein BXU04_06775 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BXU04_06800 PF00551 Formyl transferase BXU04_06815 PF00586 AIR synthase related protein, N-terminal domain BXU04_06815 PF02769 AIR synthase related protein, C-terminal domain BXU04_06825 PF01594 AI-2E family transporter BXU04_06830 PF00308 Bacterial dnaA protein BXU04_06835 PF00483 Nucleotidyl transferase BXU04_06840 PF01636 Phosphotransferase enzyme family BXU04_06855 PF01546 Peptidase family M20/M25/M40 BXU04_06855 PF07687 Peptidase dimerisation domain BXU04_06870 PF01527 Transposase BXU04_06895 PF06964 Alpha-L-arabinofuranosidase C-terminal domain BXU04_06900 PF01263 Aldose 1-epimerase BXU04_06905 PF01578 Cytochrome C assembly protein BXU04_06915 PF02881 SRP54-type protein, helical bundle domain BXU04_06915 PF00448 SRP54-type protein, GTPase domain BXU04_06915 PF02978 Signal peptide binding domain BXU04_06930 PF03060 Nitronate monooxygenase BXU04_06940 PF00886 Ribosomal protein S16 BXU04_06945 PF05239 PRC-barrel domain BXU04_06945 PF01782 RimM N-terminal domain BXU04_06950 PF01746 tRNA (Guanine-1)-methyltransferase BXU04_06955 PF01245 Ribosomal protein L19 BXU04_06965 PF01554 MatE BXU04_06970 PF01479 S4 domain BXU04_06995 PF01541 GIY-YIG catalytic domain BXU04_07000 PF00004 ATPase family associated with various cellular activities (AAA) BXU04_07000 PF10431 C-terminal, D2-small domain, of ClpB protein BXU04_07000 PF02861 Clp amino terminal domain, pathogenicity island component BXU04_07000 PF07724 AAA domain (Cdc48 subfamily) BXU04_07000 PF17871 AAA lid domain BXU04_07015 PF13276 HTH-like domain BXU04_07015 PF13683 Integrase core domain BXU04_07020 PF13276 HTH-like domain BXU04_07025 PF01527 Transposase BXU04_07040 PF07715 TonB-dependent Receptor Plug Domain BXU04_07040 PF00593 TonB dependent receptor BXU04_07065 PF12557 Cob(I)alamin adenosyltransferase N terminal BXU04_07065 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BXU04_07075 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BXU04_07080 PF02277 Phosphoribosyltransferase BXU04_07090 PF02654 Cobalamin-5-phosphate synthase BXU04_07100 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BXU04_07100 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BXU04_07105 PF04183 IucA / IucC family BXU04_07105 PF06276 Ferric iron reductase FhuF-like transporter BXU04_07115 PF06276 Ferric iron reductase FhuF-like transporter BXU04_07115 PF04183 IucA / IucC family BXU04_07125 PF07715 TonB-dependent Receptor Plug Domain BXU04_07125 PF07660 Secretin and TonB N terminus short domain BXU04_07125 PF00593 TonB dependent receptor BXU04_07140 PF13276 HTH-like domain BXU04_07140 PF13683 Integrase core domain BXU04_07145 PF02254 TrkA-N domain BXU04_07145 PF00999 Sodium/hydrogen exchanger family BXU04_07155 PF00593 TonB dependent receptor BXU04_07155 PF07715 TonB-dependent Receptor Plug Domain BXU04_07160 PF00593 TonB dependent receptor BXU04_07160 PF07715 TonB-dependent Receptor Plug Domain BXU04_07175 PF00593 TonB dependent receptor BXU04_07175 PF07715 TonB-dependent Receptor Plug Domain BXU04_07180 PF12848 ABC transporter BXU04_07180 PF00005 ABC transporter BXU04_07195 PF03466 LysR substrate binding domain BXU04_07195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU04_07205 PF13472 GDSL-like Lipase/Acylhydrolase family BXU04_07205 PF07859 alpha/beta hydrolase fold BXU04_07230 PF12833 Helix-turn-helix domain BXU04_07235 PF00183 Hsp90 protein BXU04_07235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_07250 PF13276 HTH-like domain BXU04_07265 PF00872 Transposase, Mutator family BXU04_07270 PF00120 Glutamine synthetase, catalytic domain BXU04_07275 PF04204 Homoserine O-succinyltransferase BXU04_07280 PF01810 LysE type translocator BXU04_07285 PF07722 Peptidase C26 BXU04_07295 PF01053 Cys/Met metabolism PLP-dependent enzyme BXU04_07300 PF00266 Aminotransferase class-V BXU04_07320 PF01527 Transposase BXU04_07330 PF01609 Transposase DDE domain BXU04_07330 PF05598 Transposase domain (DUF772) BXU04_07335 PF00355 Rieske [2Fe-2S] domain BXU04_07350 PF00266 Aminotransferase class-V BXU04_07355 PF01458 Uncharacterized protein family (UPF0051) BXU04_07360 PF00005 ABC transporter BXU04_07365 PF01458 Uncharacterized protein family (UPF0051) BXU04_07370 PF02082 Transcriptional regulator BXU04_07390 PF01965 DJ-1/PfpI family BXU04_07445 PF14748 Pyrroline-5-carboxylate reductase dimerisation BXU04_07445 PF03807 NADP oxidoreductase coenzyme F420-dependent BXU04_07450 PF01168 Alanine racemase, N-terminal domain BXU04_07455 PF00437 Type II/IV secretion system protein BXU04_07460 PF00437 Type II/IV secretion system protein BXU04_07480 PF13673 Acetyltransferase (GNAT) domain BXU04_07480 PF13302 Acetyltransferase (GNAT) domain BXU04_07480 PF03352 Methyladenine glycosylase BXU04_07480 PF00117 Glutamine amidotransferase class-I BXU04_07480 PF00958 GMP synthase C terminal domain BXU04_07490 PF02622 Uncharacterized ACR, COG1678 BXU04_07495 PF03652 Holliday junction resolvase BXU04_07500 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BXU04_07500 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BXU04_07510 PF02566 OsmC-like protein BXU04_07520 PF02567 Phenazine biosynthesis-like protein BXU04_07530 PF00696 Amino acid kinase family BXU04_07530 PF01842 ACT domain BXU04_07545 PF08245 Mur ligase middle domain BXU04_07560 PF00348 Polyprenyl synthetase BXU04_07565 PF00436 Single-strand binding protein family BXU04_07570 PF01590 GAF domain BXU04_07570 PF00563 EAL domain BXU04_07570 PF00990 Diguanylate cyclase, GGDEF domain BXU04_07570 PF00360 Phytochrome region BXU04_07605 PF04328 Selenoprotein, putative BXU04_07610 PF02554 Carbon starvation protein CstA BXU04_07610 PF13722 5TM C-terminal transporter carbon starvation CstA BXU04_07615 PF02678 Pirin BXU04_07615 PF05726 Pirin C-terminal cupin domain BXU04_07625 PF04717 Type VI secretion system, phage-baseplate injector BXU04_07625 PF06715 Gp5 C-terminal repeat (3 copies) BXU04_07655 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) BXU04_07655 PF04717 Type VI secretion system, phage-baseplate injector BXU04_07655 PF13296 Putative type VI secretion system Rhs element Vgr BXU04_07705 PF05726 Pirin C-terminal cupin domain BXU04_07705 PF02678 Pirin BXU04_07715 PF04493 Endonuclease V BXU04_07720 PF00300 Histidine phosphatase superfamily (branch 1) BXU04_07735 PF01431 Peptidase family M13 BXU04_07735 PF05649 Peptidase family M13 BXU04_07740 PF13091 PLD-like domain BXU04_07745 PF01339 CheB methylesterase BXU04_07745 PF00072 Response regulator receiver domain BXU04_07750 PF03705 CheR methyltransferase, all-alpha domain BXU04_07750 PF01739 CheR methyltransferase, SAM binding domain BXU04_07755 PF00563 EAL domain BXU04_07755 PF00990 Diguanylate cyclase, GGDEF domain BXU04_07755 PF13426 PAS domain BXU04_07760 PF01584 CheW-like domain BXU04_07765 PF00672 HAMP domain BXU04_07765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU04_07765 PF02203 Tar ligand binding domain homologue BXU04_07770 PF01627 Hpt domain BXU04_07770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_07770 PF02895 Signal transducing histidine kinase, homodimeric domain BXU04_07770 PF01584 CheW-like domain BXU04_07770 PF09078 CheY binding BXU04_07780 PF02559 CarD-like/TRCF domain BXU04_07780 PF00270 DEAD/DEAH box helicase BXU04_07780 PF00271 Helicase conserved C-terminal domain BXU04_07780 PF03461 TRCF domain BXU04_07780 PF17757 UvrB interaction domain BXU04_07790 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BXU04_07810 PF00512 His Kinase A (phospho-acceptor) domain BXU04_07810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_07810 PF00672 HAMP domain BXU04_07830 PF01609 Transposase DDE domain BXU04_07830 PF05598 Transposase domain (DUF772) BXU04_07855 PF01609 Transposase DDE domain BXU04_07855 PF05598 Transposase domain (DUF772) BXU04_07875 PF01609 Transposase DDE domain BXU04_07875 PF05598 Transposase domain (DUF772) BXU04_07890 PF00749 tRNA synthetases class I (E and Q), catalytic domain BXU04_07895 PF01475 Ferric uptake regulator family BXU04_07930 PF00313 'Cold-shock' DNA-binding domain BXU04_07945 PF00899 ThiF family BXU04_07950 PF01026 TatD related DNase BXU04_07965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BXU04_07965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BXU04_07965 PF02770 Acyl-CoA dehydrogenase, middle domain BXU04_07975 PF13417 Glutathione S-transferase, N-terminal domain BXU04_07980 PF13537 Glutamine amidotransferase domain BXU04_07980 PF00733 Asparagine synthase BXU04_07985 PF03358 NADPH-dependent FMN reductase BXU04_07990 PF03796 DnaB-like helicase C terminal domain BXU04_07990 PF00772 DnaB-like helicase N terminal domain BXU04_07995 PF00875 DNA photolyase BXU04_07995 PF03441 FAD binding domain of DNA photolyase BXU04_08010 PF05736 OprF membrane domain BXU04_08010 PF00691 OmpA family BXU04_08030 PF07715 TonB-dependent Receptor Plug Domain BXU04_08030 PF00593 TonB dependent receptor BXU04_08050 PF08240 Alcohol dehydrogenase GroES-like domain BXU04_08050 PF00107 Zinc-binding dehydrogenase BXU04_08055 PF00654 Voltage gated chloride channel BXU04_08065 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BXU04_08065 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BXU04_08070 PF00730 HhH-GPD superfamily base excision DNA repair protein BXU04_08070 PF02805 Metal binding domain of Ada BXU04_08070 PF12833 Helix-turn-helix domain BXU04_08070 PF06029 AlkA N-terminal domain BXU04_08120 PF03880 DbpA RNA binding domain BXU04_08120 PF00271 Helicase conserved C-terminal domain BXU04_08120 PF00270 DEAD/DEAH box helicase BXU04_08125 PF00563 EAL domain BXU04_08125 PF00990 Diguanylate cyclase, GGDEF domain BXU04_08125 PF08448 PAS fold BXU04_08130 PF00849 RNA pseudouridylate synthase BXU04_08130 PF01479 S4 domain BXU04_08150 PF03737 Aldolase/RraA BXU04_08155 PF00144 Beta-lactamase BXU04_08160 PF00999 Sodium/hydrogen exchanger family BXU04_08165 PF00512 His Kinase A (phospho-acceptor) domain BXU04_08165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_08165 PF00672 HAMP domain BXU04_08170 PF00072 Response regulator receiver domain BXU04_08170 PF00486 Transcriptional regulatory protein, C terminal BXU04_08175 PF02321 Outer membrane efflux protein BXU04_08190 PF00873 AcrB/AcrD/AcrF family BXU04_08200 PF00664 ABC transporter transmembrane region BXU04_08200 PF00005 ABC transporter BXU04_08210 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_08230 PF01609 Transposase DDE domain BXU04_08230 PF05598 Transposase domain (DUF772) BXU04_08250 PF05598 Transposase domain (DUF772) BXU04_08250 PF01609 Transposase DDE domain BXU04_08280 PF01121 Dephospho-CoA kinase BXU04_08285 PF06750 Bacterial Peptidase A24 N-terminal domain BXU04_08285 PF01478 Type IV leader peptidase family BXU04_08290 PF00482 Type II secretion system (T2SS), protein F BXU04_08295 PF07963 Prokaryotic N-terminal methylation motif BXU04_08295 PF00114 Pilin (bacterial filament) BXU04_08300 PF08019 Phosphoethanolamine transferase EptA/EptB BXU04_08300 PF00884 Sulfatase BXU04_08315 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BXU04_08315 PF00437 Type II/IV secretion system protein BXU04_08330 PF02954 Bacterial regulatory protein, Fis family BXU04_08330 PF00072 Response regulator receiver domain BXU04_08330 PF00158 Sigma-54 interaction domain BXU04_08335 PF00512 His Kinase A (phospho-acceptor) domain BXU04_08335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_08340 PF00549 CoA-ligase BXU04_08340 PF08442 ATP-grasp domain BXU04_08345 PF00549 CoA-ligase BXU04_08345 PF02629 CoA binding domain BXU04_08360 PF02540 NAD synthase BXU04_08360 PF00795 Carbon-nitrogen hydrolase BXU04_08365 PF13525 Outer membrane lipoprotein BXU04_08370 PF00849 RNA pseudouridylate synthase BXU04_08375 PF02578 Multi-copper polyphenol oxidoreductase laccase BXU04_08390 PF00982 Glycosyltransferase family 20 BXU04_08395 PF00723 Glycosyl hydrolases family 15 BXU04_08400 PF02358 Trehalose-phosphatase BXU04_08410 PF00593 TonB dependent receptor BXU04_08410 PF07715 TonB-dependent Receptor Plug Domain BXU04_08440 PF04376 Arginine-tRNA-protein transferase, N terminus BXU04_08440 PF04377 Arginine-tRNA-protein transferase, C terminus BXU04_08470 PF00378 Enoyl-CoA hydratase/isomerase BXU04_08485 PF17755 UvrA DNA-binding domain BXU04_08485 PF17760 UvrA interaction domain BXU04_08485 PF00005 ABC transporter BXU04_08490 PF00829 Ribosomal prokaryotic L21 protein BXU04_08495 PF01016 Ribosomal L27 protein BXU04_08500 PF01018 GTP1/OBG BXU04_08500 PF01926 50S ribosome-binding GTPase BXU04_08505 PF01649 Ribosomal protein S20 BXU04_08510 PF03023 Lipid II flippase MurJ BXU04_08515 PF06574 FAD synthetase BXU04_08515 PF01687 Riboflavin kinase BXU04_08520 PF06827 Zinc finger found in FPG and IleRS BXU04_08520 PF00133 tRNA synthetases class I (I, L, M and V) BXU04_08520 PF08264 Anticodon-binding domain of tRNA BXU04_08525 PF01252 Signal peptidase (SPase) II BXU04_08530 PF02401 LytB protein BXU04_08540 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BXU04_08540 PF06481 COX Aromatic Rich Motif BXU04_08545 PF00115 Cytochrome C and Quinol oxidase polypeptide I BXU04_08550 PF00510 Cytochrome c oxidase subunit III BXU04_08555 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BXU04_08565 PF04717 Type VI secretion system, phage-baseplate injector BXU04_08565 PF06715 Gp5 C-terminal repeat (3 copies) BXU04_08575 PF03527 RHS protein BXU04_08575 PF05593 RHS Repeat BXU04_08575 PF14220 Domain of unknown function (DUF4329) BXU04_08575 PF05593 RHS Repeat BXU04_08575 PF03527 RHS protein BXU04_08575 PF14220 Domain of unknown function (DUF4329) BXU04_08590 PF01527 Transposase BXU04_08595 PF13276 HTH-like domain BXU04_08595 PF13683 Integrase core domain BXU04_08610 PF01624 MutS domain I BXU04_08610 PF05188 MutS domain II BXU04_08610 PF05192 MutS domain III BXU04_08610 PF05190 MutS family domain IV BXU04_08610 PF00488 MutS domain V BXU04_08625 PF01527 Transposase BXU04_08635 PF18073 Rubredoxin metal binding domain BXU04_08645 PF01527 Transposase BXU04_08660 PF05506 Domain of unknown function (DUF756) BXU04_08660 PF04185 Phosphoesterase family BXU04_08665 PF05506 Domain of unknown function (DUF756) BXU04_08665 PF04185 Phosphoesterase family BXU04_08670 PF04185 Phosphoesterase family BXU04_08670 PF05506 Domain of unknown function (DUF756) BXU04_08690 PF00152 tRNA synthetases class II (D, K and N) BXU04_08690 PF01336 OB-fold nucleic acid binding domain BXU04_08690 PF02938 GAD domain BXU04_08705 PF01709 Transcriptional regulator BXU04_08710 PF02075 Crossover junction endodeoxyribonuclease RuvC BXU04_08715 PF01330 RuvA N terminal domain BXU04_08715 PF07499 RuvA, C-terminal domain BXU04_08720 PF02705 K+ potassium transporter BXU04_08725 PF05496 Holliday junction DNA helicase RuvB P-loop domain BXU04_08725 PF17864 RuvB AAA lid domain BXU04_08725 PF05491 RuvB C-terminal winged helix domain BXU04_08730 PF03061 Thioesterase superfamily BXU04_08735 PF01618 MotA/TolQ/ExbB proton channel family BXU04_08740 PF02472 Biopolymer transport protein ExbD/TolR BXU04_08750 PF07676 WD40-like Beta Propeller Repeat BXU04_08750 PF04052 TolB amino-terminal domain BXU04_08755 PF00691 OmpA family BXU04_08765 PF04055 Radical SAM superfamily BXU04_08770 PF00849 RNA pseudouridylate synthase BXU04_08770 PF01479 S4 domain BXU04_08815 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_08820 PF05598 Transposase domain (DUF772) BXU04_08830 PF06508 Queuosine biosynthesis protein QueC BXU04_08855 PF00270 DEAD/DEAH box helicase BXU04_08855 PF00271 Helicase conserved C-terminal domain BXU04_08855 PF00570 HRDC domain BXU04_08855 PF16124 RecQ zinc-binding BXU04_08855 PF09382 RQC domain BXU04_08860 PF00210 Ferritin-like domain BXU04_08865 PF04408 Helicase associated domain (HA2) BXU04_08865 PF00270 DEAD/DEAH box helicase BXU04_08865 PF11898 Domain of unknown function (DUF3418) BXU04_08865 PF00271 Helicase conserved C-terminal domain BXU04_08865 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BXU04_08875 PF02685 Glucokinase BXU04_08880 PF02685 Glucokinase BXU04_08890 PF02685 Glucokinase BXU04_08900 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_08915 PF04055 Radical SAM superfamily BXU04_08915 PF13186 Iron-sulfur cluster-binding domain BXU04_08920 PF05402 Coenzyme PQQ synthesis protein D (PqqD) BXU04_08925 PF03070 TENA/THI-4/PQQC family BXU04_08930 PF12706 Beta-lactamase superfamily domain BXU04_08935 PF08042 PqqA family BXU04_08940 PF13291 ACT domain BXU04_08940 PF04607 Region found in RelA / SpoT proteins BXU04_08940 PF02824 TGS domain BXU04_08950 PF00535 Glycosyl transferase family 2 BXU04_08955 PF00912 Transglycosylase BXU04_08955 PF00905 Penicillin binding protein transpeptidase domain BXU04_08955 PF14814 Bifunctional transglycosylase second domain BXU04_08965 PF13307 Helicase C-terminal domain BXU04_08965 PF04851 Type III restriction enzyme, res subunit BXU04_08970 PF00814 Glycoprotease family BXU04_08975 PF03747 ADP-ribosylglycohydrolase BXU04_08985 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BXU04_08985 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BXU04_08990 PF00072 Response regulator receiver domain BXU04_08995 PF00072 Response regulator receiver domain BXU04_09000 PF01584 CheW-like domain BXU04_09005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU04_09005 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BXU04_09010 PF00072 Response regulator receiver domain BXU04_09010 PF01627 Hpt domain BXU04_09010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_09010 PF02895 Signal transducing histidine kinase, homodimeric domain BXU04_09010 PF01584 CheW-like domain BXU04_09025 PF13302 Acetyltransferase (GNAT) domain BXU04_09050 PF01112 Asparaginase BXU04_09055 PF03932 CutC family BXU04_09105 PF01301 Glycosyl hydrolases family 35 BXU04_09115 PF07971 Glycosyl hydrolase family 92 BXU04_09115 PF17678 Glycosyl hydrolase family 92 N-terminal domain BXU04_09165 PF03412 Peptidase C39 family BXU04_09165 PF00664 ABC transporter transmembrane region BXU04_09165 PF00005 ABC transporter BXU04_09170 PF14310 Fibronectin type III-like domain BXU04_09170 PF00933 Glycosyl hydrolase family 3 N terminal domain BXU04_09170 PF01915 Glycosyl hydrolase family 3 C-terminal domain BXU04_09170 PF07691 PA14 domain BXU04_09180 PF07691 PA14 domain BXU04_09180 PF00728 Glycosyl hydrolase family 20, catalytic domain BXU04_09180 PF02838 Glycosyl hydrolase family 20, domain 2 BXU04_09190 PF00704 Glycosyl hydrolases family 18 BXU04_09190 PF01476 LysM domain BXU04_09205 PF02685 Glucokinase BXU04_09210 PF04452 RNA methyltransferase BXU04_09215 PF00202 Aminotransferase class-III BXU04_09220 PF00293 NUDIX domain BXU04_09225 PF00459 Inositol monophosphatase family BXU04_09230 PF03819 MazG nucleotide pyrophosphohydrolase domain BXU04_09245 PF01145 SPFH domain / Band 7 family BXU04_09245 PF16200 C-terminal region of band_7 BXU04_09255 PF01571 Aminomethyltransferase folate-binding domain BXU04_09255 PF08669 Glycine cleavage T-protein C-terminal barrel domain BXU04_09260 PF01597 Glycine cleavage H-protein BXU04_09295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BXU04_09295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BXU04_09295 PF09317 Domain of unknown function (DUF1974) BXU04_09300 PF00561 alpha/beta hydrolase fold BXU04_09305 PF00440 Bacterial regulatory proteins, tetR family BXU04_09310 PF07715 TonB-dependent Receptor Plug Domain BXU04_09310 PF00593 TonB dependent receptor BXU04_09320 PF01430 Hsp33 protein BXU04_09325 PF00912 Transglycosylase BXU04_09330 PF00535 Glycosyl transferase family 2 BXU04_09335 PF00478 IMP dehydrogenase / GMP reductase domain BXU04_09335 PF00571 CBS domain BXU04_09355 PF03006 Haemolysin-III related BXU04_09360 PF16658 Class II release factor RF3, C-terminal domain BXU04_09360 PF00009 Elongation factor Tu GTP binding domain BXU04_09365 PF01476 LysM domain BXU04_09365 PF08525 Opacity-associated protein A N-terminal motif BXU04_09365 PF01551 Peptidase family M23 BXU04_09370 PF00561 alpha/beta hydrolase fold BXU04_09375 PF01053 Cys/Met metabolism PLP-dependent enzyme BXU04_09385 PF03313 Serine dehydratase alpha chain BXU04_09385 PF03315 Serine dehydratase beta chain BXU04_09400 PF04264 YceI-like domain BXU04_09410 PF04264 YceI-like domain BXU04_09415 PF00672 HAMP domain BXU04_09415 PF17149 Periplasmic sensor domain found in signal transduction proteins BXU04_09415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_09415 PF01627 Hpt domain BXU04_09415 PF00072 Response regulator receiver domain BXU04_09415 PF00512 His Kinase A (phospho-acceptor) domain BXU04_09420 PF17149 Periplasmic sensor domain found in signal transduction proteins BXU04_09420 PF00672 HAMP domain BXU04_09420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_09420 PF00512 His Kinase A (phospho-acceptor) domain BXU04_09420 PF00072 Response regulator receiver domain BXU04_09420 PF01627 Hpt domain BXU04_09425 PF00672 HAMP domain BXU04_09425 PF00072 Response regulator receiver domain BXU04_09425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_09425 PF00512 His Kinase A (phospho-acceptor) domain BXU04_09425 PF17149 Periplasmic sensor domain found in signal transduction proteins BXU04_09425 PF01627 Hpt domain BXU04_09435 PF01527 Transposase BXU04_09470 PF01381 Helix-turn-helix BXU04_09470 PF06114 IrrE N-terminal-like domain BXU04_09470 PF09856 Predicted transcriptional regulator (DUF2083) BXU04_09475 PF00171 Aldehyde dehydrogenase family BXU04_09480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BXU04_09480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BXU04_09480 PF02770 Acyl-CoA dehydrogenase, middle domain BXU04_09485 PF00378 Enoyl-CoA hydratase/isomerase BXU04_09490 PF00378 Enoyl-CoA hydratase/isomerase BXU04_09490 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BXU04_09490 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BXU04_09495 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BXU04_09495 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BXU04_09500 PF01545 Cation efflux family BXU04_09505 PF00378 Enoyl-CoA hydratase/isomerase BXU04_09505 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BXU04_09505 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BXU04_09510 PF04542 Sigma-70 region 2 BXU04_09510 PF08281 Sigma-70, region 4 BXU04_09520 PF13180 PDZ domain BXU04_09525 PF06421 GTP-binding protein LepA C-terminus BXU04_09525 PF00679 Elongation factor G C-terminus BXU04_09525 PF00009 Elongation factor Tu GTP binding domain BXU04_09525 PF03144 Elongation factor Tu domain 2 BXU04_09530 PF10502 Signal peptidase, peptidase S26 BXU04_09540 PF00035 Double-stranded RNA binding motif BXU04_09540 PF14622 Ribonuclease-III-like BXU04_09545 PF07650 KH domain BXU04_09545 PF01926 50S ribosome-binding GTPase BXU04_09550 PF02565 Recombination protein O C terminal BXU04_09550 PF11967 Recombination protein O N terminal BXU04_09560 PF05958 tRNA (Uracil-5-)-methyltransferase BXU04_09565 PF01928 CYTH domain BXU04_09575 PF05598 Transposase domain (DUF772) BXU04_09580 PF01323 DSBA-like thioredoxin domain BXU04_09585 PF01593 Flavin containing amine oxidoreductase BXU04_09590 PF04244 Deoxyribodipyrimidine photo-lyase-related protein BXU04_09595 PF00933 Glycosyl hydrolase family 3 N terminal domain BXU04_09600 PF00156 Phosphoribosyl transferase domain BXU04_09605 PF01048 Phosphorylase superfamily BXU04_09610 PF00313 'Cold-shock' DNA-binding domain BXU04_09630 PF00271 Helicase conserved C-terminal domain BXU04_09630 PF08494 DEAD/H associated BXU04_09630 PF00270 DEAD/DEAH box helicase BXU04_09635 PF04675 DNA ligase N terminus BXU04_09635 PF01068 ATP dependent DNA ligase domain BXU04_09635 PF04679 ATP dependent DNA ligase C terminal region BXU04_09645 PF01068 ATP dependent DNA ligase domain BXU04_09645 PF04679 ATP dependent DNA ligase C terminal region BXU04_09645 PF04675 DNA ligase N terminus BXU04_09660 PF00990 Diguanylate cyclase, GGDEF domain BXU04_09660 PF00072 Response regulator receiver domain BXU04_09680 PF00108 Thiolase, N-terminal domain BXU04_09680 PF02803 Thiolase, C-terminal domain BXU04_09685 PF03797 Autotransporter beta-domain BXU04_09685 PF12951 Passenger-associated-transport-repeat BXU04_09685 PF00082 Subtilase family BXU04_09690 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BXU04_09690 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BXU04_09700 PF01863 Protein of unknown function DUF45 BXU04_09705 PF07043 Protein of unknown function (DUF1328) BXU04_09715 PF01258 Prokaryotic dksA/traR C4-type zinc finger BXU04_09745 PF05598 Transposase domain (DUF772) BXU04_09745 PF01609 Transposase DDE domain BXU04_09755 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BXU04_09770 PF08274 PhnA Zinc-Ribbon BXU04_09770 PF03831 PhnA domain BXU04_09785 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BXU04_09790 PF07690 Major Facilitator Superfamily BXU04_09850 PF09924 Uncharacterised conserved protein (DUF2156) BXU04_09850 PF03706 Lysylphosphatidylglycerol synthase TM region BXU04_09860 PF01042 Endoribonuclease L-PSP BXU04_09905 PF04545 Sigma-70, region 4 BXU04_09905 PF04542 Sigma-70 region 2 BXU04_09925 PF04060 Putative Fe-S cluster BXU04_09935 PF01588 Putative tRNA binding domain BXU04_09935 PF09334 tRNA synthetases class I (M) BXU04_09955 PF00324 Amino acid permease BXU04_09960 PF02574 Homocysteine S-methyltransferase BXU04_09975 PF02592 Putative vitamin uptake transporter BXU04_09995 PF05598 Transposase domain (DUF772) BXU04_10015 PF00009 Elongation factor Tu GTP binding domain BXU04_10055 PF03653 Uncharacterised protein family (UPF0093) BXU04_10080 PF00005 ABC transporter BXU04_10080 PF13732 Domain of unknown function (DUF4162) BXU04_10085 PF07715 TonB-dependent Receptor Plug Domain BXU04_10085 PF00593 TonB dependent receptor BXU04_10100 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BXU04_10105 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BXU04_10105 PF01336 OB-fold nucleic acid binding domain BXU04_10105 PF02811 PHP domain BXU04_10105 PF14579 Helix-hairpin-helix motif BXU04_10105 PF07733 Bacterial DNA polymerase III alpha NTPase domain BXU04_10110 PF01351 Ribonuclease HII BXU04_10115 PF02684 Lipid-A-disaccharide synthetase BXU04_10120 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BXU04_10120 PF00132 Bacterial transferase hexapeptide (six repeats) BXU04_10125 PF07977 FabA-like domain BXU04_10130 PF00132 Bacterial transferase hexapeptide (six repeats) BXU04_10130 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BXU04_10140 PF07244 Surface antigen variable number repeat BXU04_10140 PF01103 Surface antigen BXU04_10145 PF17820 PDZ domain BXU04_10145 PF02163 Peptidase family M50 BXU04_10150 PF13288 DXP reductoisomerase C-terminal domain BXU04_10150 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BXU04_10150 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BXU04_10160 PF01255 Putative undecaprenyl diphosphate synthase BXU04_10165 PF01765 Ribosome recycling factor BXU04_10170 PF00696 Amino acid kinase family BXU04_10180 PF00889 Elongation factor TS BXU04_10185 PF00318 Ribosomal protein S2 BXU04_10220 PF00557 Metallopeptidase family M24 BXU04_10225 PF01909 Nucleotidyltransferase domain BXU04_10225 PF01966 HD domain BXU04_10225 PF08335 GlnD PII-uridylyltransferase BXU04_10230 PF00132 Bacterial transferase hexapeptide (six repeats) BXU04_10230 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BXU04_10230 PF14602 Hexapeptide repeat of succinyl-transferase BXU04_10240 PF03960 ArsC family BXU04_10250 PF07687 Peptidase dimerisation domain BXU04_10250 PF01546 Peptidase family M20/M25/M40 BXU04_10255 PF00733 Asparagine synthase BXU04_10255 PF13537 Glutamine amidotransferase domain BXU04_10270 PF07715 TonB-dependent Receptor Plug Domain BXU04_10270 PF00593 TonB dependent receptor BXU04_10275 PF01804 Penicillin amidase BXU04_10280 PF00210 Ferritin-like domain BXU04_10285 PF03989 DNA gyrase C-terminal domain, beta-propeller BXU04_10285 PF00521 DNA gyrase/topoisomerase IV, subunit A BXU04_10300 PF02321 Outer membrane efflux protein BXU04_10305 PF00529 HlyD membrane-fusion protein of T1SS BXU04_10305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BXU04_10310 PF07690 Major Facilitator Superfamily BXU04_10370 PF02780 Transketolase, C-terminal domain BXU04_10370 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BXU04_10370 PF02779 Transketolase, pyrimidine binding domain BXU04_10380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BXU04_10380 PF02770 Acyl-CoA dehydrogenase, middle domain BXU04_10380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BXU04_10380 PF12806 Acetyl-CoA dehydrogenase C-terminal like BXU04_10395 PF01668 SmpB protein BXU04_10400 PF03364 Polyketide cyclase / dehydrase and lipid transport BXU04_10405 PF03658 RnfH family Ubiquitin BXU04_10415 PF04355 SmpA / OmlA family BXU04_10420 PF01475 Ferric uptake regulator family BXU04_10425 PF02463 RecF/RecN/SMC N terminal domain BXU04_10430 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding BXU04_10430 PF01628 HrcA protein C terminal domain BXU04_10435 PF01025 GrpE BXU04_10440 PF00012 Hsp70 protein BXU04_10445 PF00684 DnaJ central domain BXU04_10445 PF01556 DnaJ C terminal domain BXU04_10445 PF00226 DnaJ domain BXU04_10455 PF08543 Phosphomethylpyrimidine kinase BXU04_10460 PF01817 Chorismate mutase type II BXU04_10460 PF02153 Prephenate dehydrogenase BXU04_10475 PF03466 LysR substrate binding domain BXU04_10475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU04_10490 PF00664 ABC transporter transmembrane region BXU04_10490 PF00005 ABC transporter BXU04_10495 PF01205 Uncharacterized protein family UPF0029 BXU04_10500 PF03641 Possible lysine decarboxylase BXU04_10505 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BXU04_10505 PF07992 Pyridine nucleotide-disulphide oxidoreductase BXU04_10510 PF00364 Biotin-requiring enzyme BXU04_10510 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BXU04_10510 PF02817 e3 binding domain BXU04_10515 PF16870 2-oxoglutarate dehydrogenase C-terminal BXU04_10515 PF02779 Transketolase, pyrimidine binding domain BXU04_10515 PF00676 Dehydrogenase E1 component BXU04_10515 PF16078 2-oxoglutarate dehydrogenase N-terminus BXU04_10525 PF08007 Cupin superfamily protein BXU04_10545 PF00206 Lyase BXU04_10545 PF08328 Adenylosuccinate lyase C-terminal BXU04_10555 PF00571 CBS domain BXU04_10555 PF03471 Transporter associated domain BXU04_10555 PF01595 Cyclin M transmembrane N-terminal domain BXU04_10565 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_10585 PF10415 Fumarase C C-terminus BXU04_10585 PF00206 Lyase BXU04_10615 PF00005 ABC transporter BXU04_10620 PF00392 Bacterial regulatory proteins, gntR family BXU04_10630 PF00255 Glutathione peroxidase BXU04_10635 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BXU04_10635 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BXU04_10640 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BXU04_10640 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BXU04_10640 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BXU04_10645 PF04102 SlyX BXU04_10660 PF00356 Bacterial regulatory proteins, lacI family BXU04_10665 PF07690 Major Facilitator Superfamily BXU04_10670 PF00294 pfkB family carbohydrate kinase BXU04_10680 PF02574 Homocysteine S-methyltransferase BXU04_10680 PF02965 Vitamin B12 dependent methionine synthase, activation domain BXU04_10680 PF02607 B12 binding domain BXU04_10680 PF02310 B12 binding domain BXU04_10680 PF00809 Pterin binding enzyme BXU04_10685 PF00809 Pterin binding enzyme BXU04_10685 PF02574 Homocysteine S-methyltransferase BXU04_10690 PF01209 ubiE/COQ5 methyltransferase family BXU04_10695 PF02770 Acyl-CoA dehydrogenase, middle domain BXU04_10695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BXU04_10695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BXU04_10725 PF17876 Cold shock domain BXU04_10725 PF08461 Ribonuclease R winged-helix domain BXU04_10725 PF00773 RNB domain BXU04_10725 PF00575 S1 RNA binding domain BXU04_10725 PF08206 Ribonuclease B OB domain BXU04_10750 PF00588 SpoU rRNA Methylase family BXU04_10750 PF08032 RNA 2'-O ribose methyltransferase substrate binding BXU04_10760 PF05598 Transposase domain (DUF772) BXU04_10760 PF01609 Transposase DDE domain BXU04_10780 PF00872 Transposase, Mutator family BXU04_10790 PF00313 'Cold-shock' DNA-binding domain BXU04_10795 PF00561 alpha/beta hydrolase fold BXU04_10805 PF01609 Transposase DDE domain BXU04_10805 PF05598 Transposase domain (DUF772) BXU04_10810 PF05598 Transposase domain (DUF772) BXU04_10810 PF01609 Transposase DDE domain BXU04_10880 PF05598 Transposase domain (DUF772) BXU04_10880 PF01609 Transposase DDE domain BXU04_10895 PF13276 HTH-like domain BXU04_10895 PF13683 Integrase core domain BXU04_10900 PF01527 Transposase BXU04_10910 PF03544 Gram-negative bacterial TonB protein C-terminal BXU04_10915 PF02403 Seryl-tRNA synthetase N-terminal domain BXU04_10915 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BXU04_10940 PF05598 Transposase domain (DUF772) BXU04_10940 PF01609 Transposase DDE domain BXU04_10945 PF02525 Flavodoxin-like fold BXU04_10950 PF03466 LysR substrate binding domain BXU04_10950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU04_11010 PF03377 TAL effector repeat BXU04_11045 PF00596 Class II Aldolase and Adducin N-terminal domain BXU04_11050 PF13520 Amino acid permease BXU04_11055 PF13520 Amino acid permease BXU04_11065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BXU04_11065 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BXU04_11070 PF01565 FAD binding domain BXU04_11070 PF02913 FAD linked oxidases, C-terminal domain BXU04_11095 PF03918 Cytochrome C biogenesis protein BXU04_11100 PF08534 Redoxin BXU04_11105 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BXU04_11105 PF01578 Cytochrome C assembly protein BXU04_11110 PF03100 CcmE BXU04_11120 PF01578 Cytochrome C assembly protein BXU04_11125 PF03379 CcmB protein BXU04_11130 PF00005 ABC transporter BXU04_11135 PF00155 Aminotransferase class I and II BXU04_11140 PF00795 Carbon-nitrogen hydrolase BXU04_11160 PF00849 RNA pseudouridylate synthase BXU04_11160 PF01479 S4 domain BXU04_11165 PF04079 Segregation and condensation complex subunit ScpB BXU04_11170 PF02616 Segregation and condensation protein ScpA BXU04_11175 PF03795 YCII-related domain BXU04_11185 PF00356 Bacterial regulatory proteins, lacI family BXU04_11205 PF00528 Binding-protein-dependent transport system inner membrane component BXU04_11210 PF00528 Binding-protein-dependent transport system inner membrane component BXU04_11235 PF00795 Carbon-nitrogen hydrolase BXU04_11245 PF04371 Porphyromonas-type peptidyl-arginine deiminase BXU04_11255 PF00444 Ribosomal protein L36 BXU04_11260 PF02224 Cytidylate kinase BXU04_11265 PF00575 S1 RNA binding domain BXU04_11270 PF00216 Bacterial DNA-binding protein BXU04_11280 PF18073 Rubredoxin metal binding domain BXU04_11285 PF00953 Glycosyl transferase family 4 BXU04_11290 PF02719 Polysaccharide biosynthesis protein BXU04_11295 PF00483 Nucleotidyl transferase BXU04_11315 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BXU04_11315 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BXU04_11320 PF00571 CBS domain BXU04_11320 PF00478 IMP dehydrogenase / GMP reductase domain BXU04_11325 PF00117 Glutamine amidotransferase class-I BXU04_11325 PF02540 NAD synthase BXU04_11325 PF00958 GMP synthase C terminal domain BXU04_11330 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BXU04_11335 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BXU04_11335 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus BXU04_11335 PF00361 Proton-conducting membrane transporter BXU04_11340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU04_11340 PF03466 LysR substrate binding domain BXU04_11365 PF03601 Conserved hypothetical protein 698 BXU04_11370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU04_11370 PF03466 LysR substrate binding domain BXU04_11380 PF00196 Bacterial regulatory proteins, luxR family BXU04_11380 PF00072 Response regulator receiver domain BXU04_11390 PF01566 Natural resistance-associated macrophage protein BXU04_11395 PF02742 Iron dependent repressor, metal binding and dimerisation domain BXU04_11395 PF01325 Iron dependent repressor, N-terminal DNA binding domain BXU04_11400 PF14437 MafB19-like deaminase BXU04_11405 PF00929 Exonuclease BXU04_11410 PF00924 Mechanosensitive ion channel BXU04_11410 PF05552 Conserved TM helix BXU04_11415 PF00391 PEP-utilising enzyme, mobile domain BXU04_11415 PF02896 PEP-utilising enzyme, TIM barrel domain BXU04_11415 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BXU04_11420 PF03618 Kinase/pyrophosphorylase BXU04_11455 PF01066 CDP-alcohol phosphatidyltransferase BXU04_11465 PF00561 alpha/beta hydrolase fold BXU04_11480 PF00355 Rieske [2Fe-2S] domain BXU04_11480 PF01266 FAD dependent oxidoreductase BXU04_11490 PF17674 HHH domain BXU04_11490 PF00575 S1 RNA binding domain BXU04_11490 PF09371 Tex-like protein N-terminal domain BXU04_11490 PF16921 Tex protein YqgF-like domain BXU04_11505 PF00072 Response regulator receiver domain BXU04_11515 PF04551 GcpE protein BXU04_11520 PF01569 PAP2 superfamily BXU04_11535 PF07690 Major Facilitator Superfamily BXU04_11550 PF01177 Asp/Glu/Hydantoin racemase BXU04_11560 PF00892 EamA-like transporter family BXU04_11565 PF01565 FAD binding domain BXU04_11565 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BXU04_11570 PF01180 Dihydroorotate dehydrogenase BXU04_11585 PF00171 Aldehyde dehydrogenase family BXU04_11595 PF03073 TspO/MBR family BXU04_11600 PF00696 Amino acid kinase family BXU04_11600 PF03447 Homoserine dehydrogenase, NAD binding domain BXU04_11600 PF13840 ACT domain BXU04_11600 PF00742 Homoserine dehydrogenase BXU04_11600 PF01842 ACT domain BXU04_11605 PF00288 GHMP kinases N terminal domain BXU04_11605 PF08544 GHMP kinases C terminal BXU04_11610 PF07519 Tannase and feruloyl esterase BXU04_11615 PF07519 Tannase and feruloyl esterase BXU04_11620 PF07519 Tannase and feruloyl esterase BXU04_11630 PF00291 Pyridoxal-phosphate dependent enzyme BXU04_11630 PF14821 Threonine synthase N terminus BXU04_11645 PF03129 Anticodon binding domain BXU04_11645 PF13393 Histidyl-tRNA synthetase BXU04_11670 PF08029 HisG, C-terminal domain BXU04_11670 PF01634 ATP phosphoribosyltransferase BXU04_11675 PF00815 Histidinol dehydrogenase BXU04_11680 PF00155 Aminotransferase class I and II BXU04_11685 PF00475 Imidazoleglycerol-phosphate dehydratase BXU04_11690 PF00117 Glutamine amidotransferase class-I BXU04_11695 PF00977 Histidine biosynthesis protein BXU04_11700 PF00977 Histidine biosynthesis protein BXU04_11705 PF01502 Phosphoribosyl-AMP cyclohydrolase BXU04_11705 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BXU04_11715 PF03377 TAL effector repeat BXU04_11730 PF03377 TAL effector repeat BXU04_11745 PF02810 SEC-C motif BXU04_11745 PF07517 SecA DEAD-like domain BXU04_11745 PF07516 SecA Wing and Scaffold domain BXU04_11745 PF01043 SecA preprotein cross-linking domain BXU04_11855 PF02303 Helix-destabilising protein BXU04_11890 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_11900 PF05598 Transposase domain (DUF772) BXU04_11900 PF01609 Transposase DDE domain BXU04_11920 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_11940 PF03377 TAL effector repeat BXU04_11955 PF03377 TAL effector repeat BXU04_11960 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_11980 PF03377 TAL effector repeat BXU04_12005 PF05598 Transposase domain (DUF772) BXU04_12005 PF01609 Transposase DDE domain BXU04_12020 PF00872 Transposase, Mutator family BXU04_12030 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BXU04_12050 PF01066 CDP-alcohol phosphatidyltransferase BXU04_12055 PF08459 UvrC Helix-hairpin-helix N-terminal BXU04_12055 PF02151 UvrB/uvrC motif BXU04_12055 PF01541 GIY-YIG catalytic domain BXU04_12065 PF01451 Low molecular weight phosphotyrosine protein phosphatase BXU04_12070 PF02348 Cytidylyltransferase BXU04_12075 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BXU04_12080 PF00664 ABC transporter transmembrane region BXU04_12080 PF00005 ABC transporter BXU04_12090 PF01618 MotA/TolQ/ExbB proton channel family BXU04_12095 PF03772 Competence protein BXU04_12095 PF00753 Metallo-beta-lactamase superfamily BXU04_12115 PF00005 ABC transporter BXU04_12120 PF02687 FtsX-like permease family BXU04_12120 PF12704 MacB-like periplasmic core domain BXU04_12130 PF03937 Flavinator of succinate dehydrogenase BXU04_12135 PF13085 2Fe-2S iron-sulfur cluster binding domain BXU04_12145 PF00890 FAD binding domain BXU04_12145 PF02910 Fumarate reductase flavoprotein C-term BXU04_12150 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BXU04_12155 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BXU04_12165 PF01571 Aminomethyltransferase folate-binding domain BXU04_12175 PF00005 ABC transporter BXU04_12175 PF17912 MalK OB fold domain BXU04_12180 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BXU04_12180 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BXU04_12185 PF02685 Glucokinase BXU04_12190 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BXU04_12195 PF00920 Dehydratase family BXU04_12200 PF01081 KDPG and KHG aldolase BXU04_12205 PF05598 Transposase domain (DUF772) BXU04_12235 PF00672 HAMP domain BXU04_12235 PF00512 His Kinase A (phospho-acceptor) domain BXU04_12235 PF01627 Hpt domain BXU04_12235 PF00072 Response regulator receiver domain BXU04_12235 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BXU04_12235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_12250 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_12270 PF00990 Diguanylate cyclase, GGDEF domain BXU04_12290 PF02253 Phospholipase A1 BXU04_12310 PF05681 Fumarate hydratase (Fumerase) BXU04_12310 PF05683 Fumarase C-terminus BXU04_12315 PF00005 ABC transporter BXU04_12320 PF00970 Oxidoreductase FAD-binding domain BXU04_12320 PF00175 Oxidoreductase NAD-binding domain BXU04_12325 PF00255 Glutathione peroxidase BXU04_12350 PF04542 Sigma-70 region 2 BXU04_12350 PF08281 Sigma-70, region 4 BXU04_12360 PF12802 MarR family BXU04_12395 PF14310 Fibronectin type III-like domain BXU04_12395 PF00933 Glycosyl hydrolase family 3 N terminal domain BXU04_12395 PF01915 Glycosyl hydrolase family 3 C-terminal domain BXU04_12410 PF00563 EAL domain BXU04_12410 PF01590 GAF domain BXU04_12410 PF00990 Diguanylate cyclase, GGDEF domain BXU04_12410 PF00360 Phytochrome region BXU04_12420 PF00474 Sodium:solute symporter family BXU04_12430 PF00933 Glycosyl hydrolase family 3 N terminal domain BXU04_12430 PF01915 Glycosyl hydrolase family 3 C-terminal domain BXU04_12430 PF14310 Fibronectin type III-like domain BXU04_12450 PF00342 Phosphoglucose isomerase BXU04_12455 PF02261 Aspartate decarboxylase BXU04_12460 PF02569 Pantoate-beta-alanine ligase BXU04_12465 PF02548 Ketopantoate hydroxymethyltransferase BXU04_12470 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BXU04_12475 PF01743 Poly A polymerase head domain BXU04_12475 PF12626 Polymerase A arginine-rich C-terminus BXU04_12475 PF12627 Probable RNA and SrmB- binding site of polymerase A BXU04_12485 PF02649 Type I GTP cyclohydrolase folE2 BXU04_12490 PF01520 N-acetylmuramoyl-L-alanine amidase BXU04_12510 PF13276 HTH-like domain BXU04_12515 PF05598 Transposase domain (DUF772) BXU04_12520 PF00082 Subtilase family BXU04_12520 PF03797 Autotransporter beta-domain BXU04_12530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BXU04_12535 PF00873 AcrB/AcrD/AcrF family BXU04_12540 PF02321 Outer membrane efflux protein BXU04_12545 PF13426 PAS domain BXU04_12545 PF00512 His Kinase A (phospho-acceptor) domain BXU04_12545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_12545 PF00072 Response regulator receiver domain BXU04_12545 PF08448 PAS fold BXU04_12550 PF00196 Bacterial regulatory proteins, luxR family BXU04_12550 PF00072 Response regulator receiver domain BXU04_12555 PF12951 Passenger-associated-transport-repeat BXU04_12575 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BXU04_12580 PF00800 Prephenate dehydratase BXU04_12580 PF01817 Chorismate mutase type II BXU04_12580 PF01842 ACT domain BXU04_12585 PF00266 Aminotransferase class-V BXU04_12590 PF00174 Oxidoreductase molybdopterin binding domain BXU04_12600 PF01794 Ferric reductase like transmembrane component BXU04_12625 PF07702 UTRA domain BXU04_12625 PF00392 Bacterial regulatory proteins, gntR family BXU04_12635 PF07969 Amidohydrolase family BXU04_12640 PF00221 Aromatic amino acid lyase BXU04_12650 PF01175 Urocanase Rossmann-like domain BXU04_12650 PF17392 Urocanase C-terminal domain BXU04_12650 PF17391 Urocanase N-terminal domain BXU04_12670 PF13276 HTH-like domain BXU04_12680 PF03989 DNA gyrase C-terminal domain, beta-propeller BXU04_12680 PF00521 DNA gyrase/topoisomerase IV, subunit A BXU04_12685 PF01008 Initiation factor 2 subunit family BXU04_12700 PF00152 tRNA synthetases class II (D, K and N) BXU04_12705 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BXU04_12705 PF12826 Helix-hairpin-helix motif BXU04_12705 PF01653 NAD-dependent DNA ligase adenylation domain BXU04_12705 PF03120 NAD-dependent DNA ligase OB-fold domain BXU04_12705 PF00533 BRCA1 C Terminus (BRCT) domain BXU04_12715 PF04354 ZipA, C-terminal FtsZ-binding domain BXU04_12720 PF02463 RecF/RecN/SMC N terminal domain BXU04_12725 PF03948 Ribosomal protein L9, C-terminal domain BXU04_12725 PF01281 Ribosomal protein L9, N-terminal domain BXU04_12730 PF01084 Ribosomal protein S18 BXU04_12735 PF01250 Ribosomal protein S6 BXU04_12740 PF01521 Iron-sulphur cluster biosynthesis BXU04_12745 PF01336 OB-fold nucleic acid binding domain BXU04_12745 PF00152 tRNA synthetases class II (D, K and N) BXU04_12770 PF00484 Carbonic anhydrase BXU04_12775 PF06052 3-hydroxyanthranilic acid dioxygenase BXU04_12785 PF00266 Aminotransferase class-V BXU04_12790 PF01494 FAD binding domain BXU04_12795 PF00929 Exonuclease BXU04_12795 PF08411 Exonuclease C-terminal BXU04_12805 PF00248 Aldo/keto reductase family BXU04_12820 PF01513 ATP-NAD kinase BXU04_12830 PF10672 S-adenosylmethionine-dependent methyltransferase BXU04_12830 PF02926 THUMP domain BXU04_12830 PF01170 Putative RNA methylase family UPF0020 BXU04_12870 PF00581 Rhodanese-like domain BXU04_12875 PF00293 NUDIX domain BXU04_12880 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BXU04_12880 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BXU04_12885 PF00378 Enoyl-CoA hydratase/isomerase BXU04_12895 PF00730 HhH-GPD superfamily base excision DNA repair protein BXU04_12895 PF00633 Helix-hairpin-helix motif BXU04_12895 PF10576 Iron-sulfur binding domain of endonuclease III BXU04_12905 PF00484 Carbonic anhydrase BXU04_12910 PF05598 Transposase domain (DUF772) BXU04_12910 PF01609 Transposase DDE domain BXU04_12925 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_12940 PF12849 PBP superfamily domain BXU04_12945 PF12849 PBP superfamily domain BXU04_12950 PF00528 Binding-protein-dependent transport system inner membrane component BXU04_12955 PF00528 Binding-protein-dependent transport system inner membrane component BXU04_12960 PF00005 ABC transporter BXU04_12965 PF01895 PhoU domain BXU04_12975 PF00929 Exonuclease BXU04_12990 PF00872 Transposase, Mutator family BXU04_13015 PF13495 Phage integrase, N-terminal SAM-like domain BXU04_13015 PF00589 Phage integrase family BXU04_13020 PF07549 SecD/SecF GG Motif BXU04_13020 PF02355 Protein export membrane protein BXU04_13025 PF07549 SecD/SecF GG Motif BXU04_13025 PF02355 Protein export membrane protein BXU04_13025 PF13721 SecD export protein N-terminal TM region BXU04_13030 PF02699 Preprotein translocase subunit BXU04_13035 PF01702 Queuine tRNA-ribosyltransferase BXU04_13040 PF02547 Queuosine biosynthesis protein BXU04_13075 PF05598 Transposase domain (DUF772) BXU04_13110 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_13130 PF00037 4Fe-4S binding domain BXU04_13145 PF01467 Cytidylyltransferase-like BXU04_13155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_13155 PF00183 Hsp90 protein BXU04_13170 PF00899 ThiF family BXU04_13205 PF00665 Integrase core domain BXU04_13205 PF13936 Helix-turn-helix domain BXU04_13210 PF01609 Transposase DDE domain BXU04_13210 PF05598 Transposase domain (DUF772) BXU04_13250 PF03454 MoeA C-terminal region (domain IV) BXU04_13250 PF00994 Probable molybdopterin binding domain BXU04_13250 PF03453 MoeA N-terminal region (domain I and II) BXU04_13255 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BXU04_13255 PF01926 50S ribosome-binding GTPase BXU04_13260 PF01011 PQQ enzyme repeat BXU04_13260 PF13360 PQQ-like domain BXU04_13270 PF13464 Domain of unknown function (DUF4115) BXU04_13280 PF04055 Radical SAM superfamily BXU04_13285 PF00334 Nucleoside diphosphate kinase BXU04_13295 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BXU04_13295 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BXU04_13295 PF00378 Enoyl-CoA hydratase/isomerase BXU04_13300 PF02803 Thiolase, C-terminal domain BXU04_13300 PF00108 Thiolase, N-terminal domain BXU04_13305 PF00654 Voltage gated chloride channel BXU04_13315 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BXU04_13325 PF16193 AAA C-terminal domain BXU04_13325 PF12002 MgsA AAA+ ATPase C terminal BXU04_13325 PF00004 ATPase family associated with various cellular activities (AAA) BXU04_13340 PF03548 Outer membrane lipoprotein carrier protein LolA BXU04_13350 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BXU04_13350 PF17854 FtsK alpha domain BXU04_13350 PF09397 Ftsk gamma domain BXU04_13350 PF01580 FtsK/SpoIIIE family BXU04_13355 PF07992 Pyridine nucleotide-disulphide oxidoreductase BXU04_13375 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BXU04_13380 PF01176 Translation initiation factor 1A / IF-1 BXU04_13385 PF07724 AAA domain (Cdc48 subfamily) BXU04_13385 PF17871 AAA lid domain BXU04_13385 PF02861 Clp amino terminal domain, pathogenicity island component BXU04_13385 PF10431 C-terminal, D2-small domain, of ClpB protein BXU04_13385 PF00004 ATPase family associated with various cellular activities (AAA) BXU04_13390 PF02617 ATP-dependent Clp protease adaptor protein ClpS BXU04_13395 PF00293 NUDIX domain BXU04_13405 PF04356 Protein of unknown function (DUF489) BXU04_13410 PF00672 HAMP domain BXU04_13410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU04_13410 PF12729 Four helix bundle sensory module for signal transduction BXU04_13425 PF08448 PAS fold BXU04_13425 PF08447 PAS fold BXU04_13425 PF00990 Diguanylate cyclase, GGDEF domain BXU04_13425 PF00563 EAL domain BXU04_13430 PF07730 Histidine kinase BXU04_13430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_13435 PF03707 Bacterial signalling protein N terminal repeat BXU04_13435 PF00990 Diguanylate cyclase, GGDEF domain BXU04_13435 PF00563 EAL domain BXU04_13440 PF13426 PAS domain BXU04_13440 PF00989 PAS fold BXU04_13440 PF13188 PAS domain BXU04_13440 PF00512 His Kinase A (phospho-acceptor) domain BXU04_13440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_13460 PF00072 Response regulator receiver domain BXU04_13460 PF01584 CheW-like domain BXU04_13470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BXU04_13470 PF00460 Flagella basal body rod protein BXU04_13475 PF03963 Flagellar hook capping protein - N-terminal region BXU04_13480 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BXU04_13480 PF00460 Flagella basal body rod protein BXU04_13480 PF07559 Flagellar basal body protein FlaE BXU04_13485 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BXU04_13485 PF00460 Flagella basal body rod protein BXU04_13490 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BXU04_13490 PF00460 Flagella basal body rod protein BXU04_13495 PF02107 Flagellar L-ring protein BXU04_13500 PF02119 Flagellar P-ring protein BXU04_13505 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BXU04_13505 PF10135 Rod binding protein BXU04_13510 PF07196 Flagellin hook IN motif BXU04_13510 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BXU04_13520 PF00700 Bacterial flagellin C-terminal helical region BXU04_13520 PF00669 Bacterial flagellin N-terminal helical region BXU04_13525 PF07195 Flagellar hook-associated protein 2 C-terminus BXU04_13525 PF02465 Flagellar hook-associated protein 2 N-terminus BXU04_13525 PF07196 Flagellin hook IN motif BXU04_13530 PF02561 Flagellar protein FliS BXU04_13545 PF00196 Bacterial regulatory proteins, luxR family BXU04_13545 PF00072 Response regulator receiver domain BXU04_13550 PF04552 Sigma-54, DNA binding domain BXU04_13550 PF04963 Sigma-54 factor, core binding domain BXU04_13550 PF00309 Sigma-54 factor, Activator interacting domain (AID) BXU04_13555 PF01339 CheB methylesterase BXU04_13555 PF00072 Response regulator receiver domain BXU04_13560 PF00158 Sigma-54 interaction domain BXU04_13560 PF02954 Bacterial regulatory protein, Fis family BXU04_13560 PF06490 Flagellar regulatory protein FleQ BXU04_13565 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BXU04_13575 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BXU04_13575 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BXU04_13610 PF00535 Glycosyl transferase family 2 BXU04_13610 PF00534 Glycosyl transferases group 1 BXU04_13625 PF02049 Flagellar hook-basal body complex protein FliE BXU04_13630 PF08345 Flagellar M-ring protein C-terminal BXU04_13630 PF01514 Secretory protein of YscJ/FliF family BXU04_13635 PF14841 FliG middle domain BXU04_13635 PF14842 FliG N-terminal domain BXU04_13635 PF01706 FliG C-terminal domain BXU04_13645 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BXU04_13645 PF18269 T3SS EscN ATPase C-terminal domain BXU04_13665 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BXU04_13665 PF02154 Flagellar motor switch protein FliM BXU04_13670 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BXU04_13675 PF04347 Flagellar biosynthesis protein, FliO BXU04_13680 PF00813 FliP family BXU04_13690 PF01313 Bacterial export proteins, family 3 BXU04_13695 PF01311 Bacterial export proteins, family 1 BXU04_13700 PF00990 Diguanylate cyclase, GGDEF domain BXU04_13705 PF00990 Diguanylate cyclase, GGDEF domain BXU04_13710 PF00563 EAL domain BXU04_13710 PF03707 Bacterial signalling protein N terminal repeat BXU04_13710 PF00990 Diguanylate cyclase, GGDEF domain BXU04_13715 PF01312 FlhB HrpN YscU SpaS Family BXU04_13720 PF00771 FHIPEP family BXU04_13730 PF00448 SRP54-type protein, GTPase domain BXU04_13735 PF10609 NUBPL iron-transfer P-loop NTPase BXU04_13740 PF04545 Sigma-70, region 4 BXU04_13740 PF04539 Sigma-70 region 3 BXU04_13740 PF04542 Sigma-70 region 2 BXU04_13745 PF00072 Response regulator receiver domain BXU04_13750 PF04344 Chemotaxis phosphatase, CheZ BXU04_13755 PF01627 Hpt domain BXU04_13755 PF00072 Response regulator receiver domain BXU04_13755 PF01584 CheW-like domain BXU04_13755 PF02895 Signal transducing histidine kinase, homodimeric domain BXU04_13755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_13785 PF05598 Transposase domain (DUF772) BXU04_13785 PF01609 Transposase DDE domain BXU04_13795 PF03527 RHS protein BXU04_13795 PF05593 RHS Repeat BXU04_13805 PF05598 Transposase domain (DUF772) BXU04_13805 PF01609 Transposase DDE domain BXU04_13815 PF05598 Transposase domain (DUF772) BXU04_13815 PF01609 Transposase DDE domain BXU04_13850 PF00034 Cytochrome c BXU04_13910 PF05598 Transposase domain (DUF772) BXU04_13910 PF01609 Transposase DDE domain BXU04_13920 PF00005 ABC transporter BXU04_13920 PF00664 ABC transporter transmembrane region BXU04_13925 PF00664 ABC transporter transmembrane region BXU04_13925 PF00005 ABC transporter BXU04_13930 PF01654 Cytochrome bd terminal oxidase subunit I BXU04_13935 PF01654 Cytochrome bd terminal oxidase subunit I BXU04_13940 PF02322 Cytochrome bd terminal oxidase subunit II BXU04_13960 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BXU04_13960 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BXU04_13965 PF00171 Aldehyde dehydrogenase family BXU04_13970 PF01472 PUA domain BXU04_13970 PF00696 Amino acid kinase family BXU04_13985 PF00206 Lyase BXU04_13990 PF01118 Semialdehyde dehydrogenase, NAD binding domain BXU04_14000 PF00696 Amino acid kinase family BXU04_14000 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase BXU04_14005 PF07687 Peptidase dimerisation domain BXU04_14005 PF01546 Peptidase family M20/M25/M40 BXU04_14015 PF00764 Arginosuccinate synthase BXU04_14020 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BXU04_14020 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BXU04_14030 PF01406 tRNA synthetases class I (C) catalytic domain BXU04_14030 PF09190 DALR domain BXU04_14035 PF02657 Fe-S metabolism associated domain BXU04_14050 PF01258 Prokaryotic dksA/traR C4-type zinc finger BXU04_14055 PF01809 Putative membrane protein insertion efficiency factor BXU04_14060 PF01979 Amidohydrolase family BXU04_14065 PF01551 Peptidase family M23 BXU04_14065 PF08460 Bacterial SH3 domain BXU04_14075 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_14100 PF01609 Transposase DDE domain BXU04_14100 PF05598 Transposase domain (DUF772) BXU04_14110 PF01095 Pectinesterase BXU04_14125 PF00295 Glycosyl hydrolases family 28 BXU04_14135 PF13419 Haloacid dehalogenase-like hydrolase BXU04_14145 PF01979 Amidohydrolase family BXU04_14155 PF01132 Elongation factor P (EF-P) OB domain BXU04_14155 PF09285 Elongation factor P, C-terminal BXU04_14155 PF08207 Elongation factor P (EF-P) KOW-like domain BXU04_14160 PF04055 Radical SAM superfamily BXU04_14165 PF00563 EAL domain BXU04_14165 PF03707 Bacterial signalling protein N terminal repeat BXU04_14165 PF13188 PAS domain BXU04_14165 PF00990 Diguanylate cyclase, GGDEF domain BXU04_14175 PF00588 SpoU rRNA Methylase family BXU04_14180 PF00459 Inositol monophosphatase family BXU04_14185 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BXU04_14185 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BXU04_14190 PF00545 ribonuclease BXU04_14210 PF16326 ABC transporter C-terminal domain BXU04_14210 PF12848 ABC transporter BXU04_14210 PF00005 ABC transporter BXU04_14215 PF03880 DbpA RNA binding domain BXU04_14215 PF00270 DEAD/DEAH box helicase BXU04_14215 PF00271 Helicase conserved C-terminal domain BXU04_14220 PF00156 Phosphoribosyl transferase domain BXU04_14225 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BXU04_14235 PF02798 Glutathione S-transferase, N-terminal domain BXU04_14235 PF14497 Glutathione S-transferase, C-terminal domain BXU04_14240 PF00313 'Cold-shock' DNA-binding domain BXU04_14245 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BXU04_14250 PF07152 YaeQ protein BXU04_14260 PF00563 EAL domain BXU04_14260 PF00990 Diguanylate cyclase, GGDEF domain BXU04_14260 PF00072 Response regulator receiver domain BXU04_14265 PF01435 Peptidase family M48 BXU04_14270 PF00749 tRNA synthetases class I (E and Q), catalytic domain BXU04_14275 PF00106 short chain dehydrogenase BXU04_14280 PF05233 PHB accumulation regulatory domain BXU04_14280 PF07879 PHB/PHA accumulation regulator DNA-binding domain BXU04_14300 PF08676 MutL C terminal dimerisation domain BXU04_14300 PF01119 DNA mismatch repair protein, C-terminal domain BXU04_14305 PF11741 AMIN domain BXU04_14305 PF01520 N-acetylmuramoyl-L-alanine amidase BXU04_14310 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BXU04_14315 PF01256 Carbohydrate kinase BXU04_14315 PF03853 YjeF-related protein N-terminus BXU04_14320 PF08331 Domain of unknown function (DUF1730) BXU04_14330 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_14335 PF02601 Exonuclease VII, large subunit BXU04_14335 PF13742 OB-fold nucleic acid binding domain BXU04_14355 PF03781 Sulfatase-modifying factor enzyme 1 BXU04_14370 PF00570 HRDC domain BXU04_14370 PF01612 3'-5' exonuclease BXU04_14375 PF01068 ATP dependent DNA ligase domain BXU04_14375 PF13298 DNA polymerase Ligase (LigD) BXU04_14375 PF01068 ATP dependent DNA ligase domain BXU04_14375 PF04679 ATP dependent DNA ligase C terminal region BXU04_14375 PF04679 ATP dependent DNA ligase C terminal region BXU04_14375 PF13298 DNA polymerase Ligase (LigD) BXU04_14425 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BXU04_14425 PF14850 DNA-binding domain of Proline dehydrogenase BXU04_14425 PF00171 Aldehyde dehydrogenase family BXU04_14425 PF01619 Proline dehydrogenase BXU04_14435 PF00872 Transposase, Mutator family BXU04_14475 PF04386 Stringent starvation protein B BXU04_14480 PF02798 Glutathione S-transferase, N-terminal domain BXU04_14480 PF00043 Glutathione S-transferase, C-terminal domain BXU04_14485 PF02167 Cytochrome C1 family BXU04_14490 PF00032 Cytochrome b(C-terminal)/b6/petD BXU04_14490 PF00033 Cytochrome b/b6/petB BXU04_14495 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BXU04_14495 PF00355 Rieske [2Fe-2S] domain BXU04_14500 PF01464 Transglycosylase SLT domain BXU04_14520 PF00919 Uncharacterized protein family UPF0004 BXU04_14520 PF01938 TRAM domain BXU04_14520 PF04055 Radical SAM superfamily BXU04_14525 PF02562 PhoH-like protein BXU04_14535 PF02130 Uncharacterized protein family UPF0054 BXU04_14545 PF00571 CBS domain BXU04_14545 PF03471 Transporter associated domain BXU04_14560 PF00171 Aldehyde dehydrogenase family BXU04_14570 PF00528 Binding-protein-dependent transport system inner membrane component BXU04_14575 PF00528 Binding-protein-dependent transport system inner membrane component BXU04_14580 PF00005 ABC transporter BXU04_14580 PF08402 TOBE domain BXU04_14585 PF02321 Outer membrane efflux protein BXU04_14590 PF07690 Major Facilitator Superfamily BXU04_14595 PF13533 Biotin-lipoyl like BXU04_14605 PF00120 Glutamine synthetase, catalytic domain BXU04_14615 PF00120 Glutamine synthetase, catalytic domain BXU04_14620 PF01266 FAD dependent oxidoreductase BXU04_14625 PF00072 Response regulator receiver domain BXU04_14625 PF00990 Diguanylate cyclase, GGDEF domain BXU04_14630 PF07690 Major Facilitator Superfamily BXU04_14630 PF00083 Sugar (and other) transporter BXU04_14640 PF00384 Molybdopterin oxidoreductase BXU04_14645 PF02634 FdhD/NarQ family BXU04_14650 PF07690 Major Facilitator Superfamily BXU04_14660 PF00202 Aminotransferase class-III BXU04_14665 PF00005 ABC transporter BXU04_14675 PF04286 Protein of unknown function (DUF445) BXU04_14680 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BXU04_14680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_14680 PF01627 Hpt domain BXU04_14680 PF00672 HAMP domain BXU04_14680 PF00512 His Kinase A (phospho-acceptor) domain BXU04_14680 PF00072 Response regulator receiver domain BXU04_14685 PF00072 Response regulator receiver domain BXU04_14690 PF05598 Transposase domain (DUF772) BXU04_14690 PF01609 Transposase DDE domain BXU04_14700 PF05088 Bacterial NAD-glutamate dehydrogenase BXU04_14710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BXU04_14710 PF00529 HlyD membrane-fusion protein of T1SS BXU04_14715 PF00873 AcrB/AcrD/AcrF family BXU04_14720 PF13006 Insertion element 4 transposase N-terminal BXU04_14720 PF01609 Transposase DDE domain BXU04_14730 PF01609 Transposase DDE domain BXU04_14730 PF13006 Insertion element 4 transposase N-terminal BXU04_14735 PF00356 Bacterial regulatory proteins, lacI family BXU04_14740 PF05524 PEP-utilising enzyme, N-terminal BXU04_14740 PF00391 PEP-utilising enzyme, mobile domain BXU04_14740 PF00381 PTS HPr component phosphorylation site BXU04_14740 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BXU04_14740 PF02896 PEP-utilising enzyme, TIM barrel domain BXU04_14745 PF00294 pfkB family carbohydrate kinase BXU04_14750 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BXU04_14765 PF01609 Transposase DDE domain BXU04_14765 PF05598 Transposase domain (DUF772) BXU04_14830 PF03377 TAL effector repeat BXU04_14835 PF04717 Type VI secretion system, phage-baseplate injector BXU04_14845 PF00665 Integrase core domain BXU04_14845 PF13276 HTH-like domain BXU04_14845 PF13333 Integrase core domain BXU04_14855 PF04717 Type VI secretion system, phage-baseplate injector BXU04_14900 PF07715 TonB-dependent Receptor Plug Domain BXU04_14900 PF00593 TonB dependent receptor BXU04_14910 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BXU04_14910 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BXU04_14930 PF01618 MotA/TolQ/ExbB proton channel family BXU04_14935 PF00691 OmpA family BXU04_14935 PF13677 Membrane MotB of proton-channel complex MotA/MotB BXU04_14940 PF13614 AAA domain BXU04_14945 PF01584 CheW-like domain BXU04_14955 PF00072 Response regulator receiver domain BXU04_14960 PF01627 Hpt domain BXU04_14960 PF01584 CheW-like domain BXU04_14960 PF09078 CheY binding BXU04_14960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_14960 PF02895 Signal transducing histidine kinase, homodimeric domain BXU04_14975 PF00672 HAMP domain BXU04_14975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU04_14975 PF02203 Tar ligand binding domain homologue BXU04_14985 PF02203 Tar ligand binding domain homologue BXU04_14985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU04_14985 PF00672 HAMP domain BXU04_14995 PF02203 Tar ligand binding domain homologue BXU04_14995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU04_14995 PF00672 HAMP domain BXU04_15005 PF00672 HAMP domain BXU04_15005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU04_15005 PF02203 Tar ligand binding domain homologue BXU04_15015 PF02203 Tar ligand binding domain homologue BXU04_15015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU04_15015 PF00672 HAMP domain BXU04_15020 PF02203 Tar ligand binding domain homologue BXU04_15020 PF00672 HAMP domain BXU04_15020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU04_15035 PF07317 Flagellar regulator YcgR BXU04_15035 PF07238 PilZ domain BXU04_15040 PF01584 CheW-like domain BXU04_15065 PF00672 HAMP domain BXU04_15065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU04_15065 PF02203 Tar ligand binding domain homologue BXU04_15070 PF01739 CheR methyltransferase, SAM binding domain BXU04_15070 PF03705 CheR methyltransferase, all-alpha domain BXU04_15075 PF03975 CheD chemotactic sensory transduction BXU04_15080 PF01339 CheB methylesterase BXU04_15080 PF00072 Response regulator receiver domain BXU04_15085 PF00990 Diguanylate cyclase, GGDEF domain BXU04_15085 PF00563 EAL domain BXU04_15085 PF03707 Bacterial signalling protein N terminal repeat BXU04_15095 PF00561 alpha/beta hydrolase fold BXU04_15100 PF00330 Aconitase family (aconitate hydratase) BXU04_15100 PF06434 Aconitate hydratase 2 N-terminus BXU04_15100 PF11791 Aconitate B N-terminal domain BXU04_15115 PF00330 Aconitase family (aconitate hydratase) BXU04_15115 PF00694 Aconitase C-terminal domain BXU04_15125 PF13193 AMP-binding enzyme C-terminal domain BXU04_15125 PF00501 AMP-binding enzyme BXU04_15130 PF00378 Enoyl-CoA hydratase/isomerase BXU04_15135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_15135 PF00512 His Kinase A (phospho-acceptor) domain BXU04_15135 PF01627 Hpt domain BXU04_15135 PF00072 Response regulator receiver domain BXU04_15145 PF00072 Response regulator receiver domain BXU04_15150 PF00152 tRNA synthetases class II (D, K and N) BXU04_15150 PF01336 OB-fold nucleic acid binding domain BXU04_15175 PF01610 Transposase BXU04_15175 PF13542 Helix-turn-helix domain of transposase family ISL3 BXU04_15175 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BXU04_15205 PF02272 DHHA1 domain BXU04_15205 PF17768 RecJ OB domain BXU04_15205 PF01368 DHH family BXU04_15215 PF01272 Transcription elongation factor, GreA/GreB, C-term BXU04_15215 PF03449 Transcription elongation factor, N-terminal BXU04_15220 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BXU04_15220 PF02142 MGS-like domain BXU04_15220 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BXU04_15230 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BXU04_15230 PF00117 Glutamine amidotransferase class-I BXU04_15235 PF05173 Dihydrodipicolinate reductase, C-terminus BXU04_15235 PF01113 Dihydrodipicolinate reductase, N-terminus BXU04_15245 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_15250 PF03475 3-alpha domain BXU04_15250 PF03473 MOSC domain BXU04_15255 PF00155 Aminotransferase class I and II BXU04_15275 PF07664 Ferrous iron transport protein B C terminus BXU04_15275 PF02421 Ferrous iron transport protein B BXU04_15275 PF07670 Nucleoside recognition BXU04_15285 PF00378 Enoyl-CoA hydratase/isomerase BXU04_15295 PF00682 HMGL-like BXU04_15300 PF00106 short chain dehydrogenase BXU04_15305 PF09285 Elongation factor P, C-terminal BXU04_15305 PF01132 Elongation factor P (EF-P) OB domain BXU04_15305 PF08207 Elongation factor P (EF-P) KOW-like domain BXU04_15325 PF00083 Sugar (and other) transporter BXU04_15335 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BXU04_15335 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BXU04_15345 PF16338 Domain of unknown function (DUF4968) BXU04_15345 PF17137 Domain of unknown function (DUF5110) BXU04_15345 PF01055 Glycosyl hydrolases family 31 BXU04_15355 PF03466 LysR substrate binding domain BXU04_15355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU04_15360 PF01081 KDPG and KHG aldolase BXU04_15365 PF13378 Enolase C-terminal domain-like BXU04_15365 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BXU04_15370 PF08450 SMP-30/Gluconolactonase/LRE-like region BXU04_15375 PF05035 2-keto-3-deoxy-galactonokinase BXU04_15380 PF11953 Domain of unknown function (DUF3470) BXU04_15380 PF00037 4Fe-4S binding domain BXU04_15390 PF00701 Dihydrodipicolinate synthetase family BXU04_15405 PF00578 AhpC/TSA family BXU04_15410 PF02562 PhoH-like protein BXU04_15410 PF13638 PIN domain BXU04_15420 PF08543 Phosphomethylpyrimidine kinase BXU04_15450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU04_15450 PF03466 LysR substrate binding domain BXU04_15455 PF17954 Quercetinase C-terminal cupin domain BXU04_15455 PF02678 Pirin BXU04_15480 PF00772 DnaB-like helicase N terminal domain BXU04_15480 PF03796 DnaB-like helicase C terminal domain BXU04_15500 PF02599 Global regulator protein family BXU04_15505 PF02272 DHHA1 domain BXU04_15505 PF01411 tRNA synthetases class II (A) BXU04_15505 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BXU04_15510 PF02631 RecX family BXU04_15515 PF00154 recA bacterial DNA recombination protein BXU04_15520 PF01726 LexA DNA binding domain BXU04_15520 PF00717 Peptidase S24-like BXU04_15525 PF03109 ABC1 family BXU04_15530 PF02464 Competence-damaged protein BXU04_15535 PF13167 GTP-binding GTPase N-terminal BXU04_15535 PF16360 GTP-binding GTPase Middle Region BXU04_15535 PF01926 50S ribosome-binding GTPase BXU04_15540 PF17209 Hfq protein BXU04_15550 PF00809 Pterin binding enzyme BXU04_15555 PF01434 Peptidase family M41 BXU04_15555 PF06480 FtsH Extracellular BXU04_15555 PF17862 AAA+ lid domain BXU04_15555 PF00004 ATPase family associated with various cellular activities (AAA) BXU04_15560 PF01728 FtsJ-like methyltransferase BXU04_15565 PF01985 CRS1 / YhbY (CRM) domain BXU04_15575 PF01476 LysM domain BXU04_15575 PF01551 Peptidase family M23 BXU04_15580 PF09335 SNARE associated Golgi protein BXU04_15590 PF01975 Survival protein SurE BXU04_15595 PF01713 Smr domain BXU04_15600 PF01142 tRNA pseudouridine synthase D (TruD) BXU04_15605 PF02542 YgbB family BXU04_15615 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BXU04_15620 PF04977 Septum formation initiator BXU04_15625 PF00113 Enolase, C-terminal TIM barrel domain BXU04_15625 PF03952 Enolase, N-terminal domain BXU04_15635 PF00793 DAHP synthetase I family BXU04_15640 PF06418 CTP synthase N-terminus BXU04_15640 PF00117 Glutamine amidotransferase class-I BXU04_15650 PF01751 Toprim domain BXU04_15650 PF00986 DNA gyrase B subunit, carboxyl terminus BXU04_15650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_15650 PF00204 DNA gyrase B BXU04_15670 PF02698 DUF218 domain BXU04_15675 PF01384 Phosphate transporter family BXU04_15690 PF01595 Cyclin M transmembrane N-terminal domain BXU04_15690 PF00571 CBS domain BXU04_15690 PF03471 Transporter associated domain BXU04_15705 PF00296 Luciferase-like monooxygenase BXU04_15720 PF07690 Major Facilitator Superfamily BXU04_15730 PF00005 ABC transporter BXU04_15730 PF00664 ABC transporter transmembrane region BXU04_15735 PF00005 ABC transporter BXU04_15755 PF13579 Glycosyl transferase 4-like domain BXU04_15755 PF00534 Glycosyl transferases group 1 BXU04_15775 PF08241 Methyltransferase domain BXU04_15790 PF00535 Glycosyl transferase family 2 BXU04_15795 PF01943 Polysaccharide biosynthesis protein BXU04_15800 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BXU04_15820 PF05523 WxcM-like, C-terminal BXU04_15835 PF00034 Cytochrome c BXU04_15845 PF08281 Sigma-70, region 4 BXU04_15845 PF04542 Sigma-70 region 2 BXU04_15855 PF00082 Subtilase family BXU04_15860 PF01578 Cytochrome C assembly protein BXU04_15865 PF04995 Heme exporter protein D (CcmD) BXU04_15870 PF03100 CcmE BXU04_15875 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BXU04_15875 PF01578 Cytochrome C assembly protein BXU04_15880 PF08534 Redoxin BXU04_15885 PF03918 Cytochrome C biogenesis protein BXU04_15895 PF03377 TAL effector repeat BXU04_15915 PF03377 TAL effector repeat BXU04_15940 PF00873 AcrB/AcrD/AcrF family BXU04_15950 PF00873 AcrB/AcrD/AcrF family BXU04_15955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BXU04_15955 PF00529 HlyD membrane-fusion protein of T1SS BXU04_15990 PF13276 HTH-like domain BXU04_16005 PF00072 Response regulator receiver domain BXU04_16005 PF00486 Transcriptional regulatory protein, C terminal BXU04_16010 PF03150 Di-haem cytochrome c peroxidase BXU04_16010 PF00034 Cytochrome c BXU04_16015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_16015 PF00512 His Kinase A (phospho-acceptor) domain BXU04_16020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU04_16020 PF03466 LysR substrate binding domain BXU04_16025 PF06812 ImpA, N-terminal, type VI secretion system BXU04_16055 PF00069 Protein kinase domain BXU04_16070 PF14331 ImcF-related N-terminal domain BXU04_16070 PF06744 Type VI secretion protein IcmF C-terminal BXU04_16070 PF06761 Intracellular multiplication and human macrophage-killing BXU04_16080 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE BXU04_16095 PF06715 Gp5 C-terminal repeat (3 copies) BXU04_16095 PF04717 Type VI secretion system, phage-baseplate injector BXU04_16105 PF01609 Transposase DDE domain BXU04_16105 PF05598 Transposase domain (DUF772) BXU04_16115 PF10431 C-terminal, D2-small domain, of ClpB protein BXU04_16115 PF17871 AAA lid domain BXU04_16115 PF07724 AAA domain (Cdc48 subfamily) BXU04_16115 PF00004 ATPase family associated with various cellular activities (AAA) BXU04_16125 PF05947 Type VI secretion system, TssF BXU04_16130 PF04965 Gene 25-like lysozyme BXU04_16135 PF07024 ImpE protein BXU04_16140 PF05638 Type VI secretion system effector, Hcp BXU04_16145 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath BXU04_16150 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 BXU04_16160 PF05598 Transposase domain (DUF772) BXU04_16160 PF01609 Transposase DDE domain BXU04_16175 PF01609 Transposase DDE domain BXU04_16175 PF05598 Transposase domain (DUF772) BXU04_16220 PF01106 NifU-like domain BXU04_16225 PF01329 Pterin 4 alpha carbinolamine dehydratase BXU04_16235 PF02535 ZIP Zinc transporter BXU04_16240 PF02535 ZIP Zinc transporter BXU04_16250 PF01479 S4 domain BXU04_16250 PF00849 RNA pseudouridylate synthase BXU04_16255 PF00575 S1 RNA binding domain BXU04_16255 PF10150 Ribonuclease E/G family BXU04_16255 PF12111 Polyribonucleotide phosphorylase C terminal BXU04_16270 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_16275 PF00072 Response regulator receiver domain BXU04_16275 PF00196 Bacterial regulatory proteins, luxR family BXU04_16280 PF17773 UPF0176 acylphosphatase like domain BXU04_16280 PF00581 Rhodanese-like domain BXU04_16285 PF05598 Transposase domain (DUF772) BXU04_16285 PF01609 Transposase DDE domain BXU04_16295 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BXU04_16305 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BXU04_16305 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BXU04_16305 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BXU04_16315 PF17837 4'-phosphopantetheinyl transferase N-terminal domain BXU04_16315 PF01648 4'-phosphopantetheinyl transferase superfamily BXU04_16340 PF05598 Transposase domain (DUF772) BXU04_16340 PF01609 Transposase DDE domain BXU04_16345 PF05598 Transposase domain (DUF772) BXU04_16345 PF01609 Transposase DDE domain BXU04_16380 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BXU04_16380 PF10414 Sirohaem synthase dimerisation region BXU04_16380 PF14824 Sirohaem biosynthesis protein central BXU04_16405 PF12804 MobA-like NTP transferase domain BXU04_16410 PF03453 MoeA N-terminal region (domain I and II) BXU04_16410 PF03454 MoeA C-terminal region (domain IV) BXU04_16410 PF00994 Probable molybdopterin binding domain BXU04_16495 PF04616 Glycosyl hydrolases family 43 BXU04_16500 PF07532 Bacterial Ig-like domain (group 4) BXU04_16505 PF00593 TonB dependent receptor BXU04_16505 PF07715 TonB-dependent Receptor Plug Domain BXU04_16515 PF09286 Pro-kumamolisin, activation domain BXU04_16515 PF00082 Subtilase family BXU04_16560 PF13520 Amino acid permease BXU04_16575 PF00557 Metallopeptidase family M24 BXU04_16575 PF01321 Creatinase/Prolidase N-terminal domain BXU04_16580 PF00171 Aldehyde dehydrogenase family BXU04_16585 PF00701 Dihydrodipicolinate synthetase family BXU04_16590 PF04324 BFD-like [2Fe-2S] binding domain BXU04_16590 PF07992 Pyridine nucleotide-disulphide oxidoreductase BXU04_16600 PF01266 FAD dependent oxidoreductase BXU04_16605 PF05544 Proline racemase BXU04_16615 PF00448 SRP54-type protein, GTPase domain BXU04_16615 PF02881 SRP54-type protein, helical bundle domain BXU04_16630 PF00633 Helix-hairpin-helix motif BXU04_16630 PF00730 HhH-GPD superfamily base excision DNA repair protein BXU04_16630 PF14815 NUDIX domain BXU04_16635 PF04362 Bacterial Fe(2+) trafficking BXU04_16640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_16640 PF00072 Response regulator receiver domain BXU04_16640 PF13426 PAS domain BXU04_16655 PF05598 Transposase domain (DUF772) BXU04_16735 PF08212 Lipocalin-like domain BXU04_16770 PF03808 Glycosyl transferase WecB/TagA/CpsF family BXU04_16785 PF14667 Polysaccharide biosynthesis C-terminal domain BXU04_16795 PF13439 Glycosyltransferase Family 4 BXU04_16795 PF00534 Glycosyl transferases group 1 BXU04_16815 PF02397 Bacterial sugar transferase BXU04_16835 PF13411 MerR HTH family regulatory protein BXU04_16840 PF00216 Bacterial DNA-binding protein BXU04_16845 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BXU04_16845 PF03483 B3/4 domain BXU04_16845 PF03484 tRNA synthetase B5 domain BXU04_16845 PF03147 Ferredoxin-fold anticodon binding domain BXU04_16845 PF01588 Putative tRNA binding domain BXU04_16850 PF01409 tRNA synthetases class II core domain (F) BXU04_16850 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BXU04_16855 PF00453 Ribosomal protein L20 BXU04_16860 PF01632 Ribosomal protein L35 BXU04_16865 PF00707 Translation initiation factor IF-3, C-terminal domain BXU04_16865 PF05198 Translation initiation factor IF-3, N-terminal domain BXU04_16870 PF03129 Anticodon binding domain BXU04_16870 PF02824 TGS domain BXU04_16870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BXU04_16870 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BXU04_16885 PF01527 Transposase BXU04_16910 PF02151 UvrB/uvrC motif BXU04_16910 PF04851 Type III restriction enzyme, res subunit BXU04_16910 PF00271 Helicase conserved C-terminal domain BXU04_16910 PF17757 UvrB interaction domain BXU04_16910 PF12344 Ultra-violet resistance protein B BXU04_16915 PF00114 Pilin (bacterial filament) BXU04_16915 PF07963 Prokaryotic N-terminal methylation motif BXU04_16925 PF07963 Prokaryotic N-terminal methylation motif BXU04_16925 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor BXU04_16930 PF05567 Neisseria PilC beta-propeller domain BXU04_16950 PF07963 Prokaryotic N-terminal methylation motif BXU04_16950 PF12019 Type II transport protein GspH BXU04_16955 PF03641 Possible lysine decarboxylase BXU04_16955 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases BXU04_16955 PF11892 Domain of unknown function (DUF3412) BXU04_16960 PF00593 TonB dependent receptor BXU04_16970 PF01914 MarC family integral membrane protein BXU04_16980 PF00462 Glutaredoxin BXU04_16985 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BXU04_16985 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BXU04_16990 PF02222 ATP-grasp domain BXU04_16990 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BXU04_16995 PF00731 AIR carboxylase BXU04_17005 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BXU04_17005 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BXU04_17015 PF00013 KH domain BXU04_17015 PF00575 S1 RNA binding domain BXU04_17015 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BXU04_17015 PF03725 3' exoribonuclease family, domain 2 BXU04_17015 PF01138 3' exoribonuclease family, domain 1 BXU04_17020 PF00312 Ribosomal protein S15 BXU04_17025 PF01509 TruB family pseudouridylate synthase (N terminal domain) BXU04_17025 PF09157 Pseudouridine synthase II TruB, C-terminal BXU04_17025 PF16198 tRNA pseudouridylate synthase B C-terminal domain BXU04_17030 PF02033 Ribosome-binding factor A BXU04_17035 PF11987 Translation-initiation factor 2 BXU04_17035 PF08364 Bacterial translation initiation factor IF-2 associated region BXU04_17035 PF04760 Translation initiation factor IF-2, N-terminal region BXU04_17035 PF00009 Elongation factor Tu GTP binding domain BXU04_17040 PF13184 NusA-like KH domain BXU04_17040 PF08529 NusA N-terminal domain BXU04_17040 PF00575 S1 RNA binding domain BXU04_17045 PF02576 RimP N-terminal domain BXU04_17045 PF17384 RimP C-terminal SH3 domain BXU04_17055 PF00361 Proton-conducting membrane transporter BXU04_17060 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus BXU04_17060 PF00361 Proton-conducting membrane transporter BXU04_17065 PF00361 Proton-conducting membrane transporter BXU04_17065 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BXU04_17070 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BXU04_17075 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BXU04_17080 PF12838 4Fe-4S dicluster domain BXU04_17085 PF00146 NADH dehydrogenase BXU04_17090 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BXU04_17090 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal BXU04_17090 PF00384 Molybdopterin oxidoreductase BXU04_17095 PF10531 SLBB domain BXU04_17095 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BXU04_17095 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BXU04_17105 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BXU04_17110 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BXU04_17115 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BXU04_17120 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BXU04_17135 PF00121 Triosephosphate isomerase BXU04_17160 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_17170 PF00563 EAL domain BXU04_17170 PF00990 Diguanylate cyclase, GGDEF domain BXU04_17170 PF03707 Bacterial signalling protein N terminal repeat BXU04_17185 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BXU04_17185 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BXU04_17185 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BXU04_17185 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BXU04_17190 PF17848 Acetyl-coA carboxylase zinc finger domain BXU04_17190 PF01039 Carboxyl transferase domain BXU04_17195 PF00290 Tryptophan synthase alpha chain BXU04_17205 PF00291 Pyridoxal-phosphate dependent enzyme BXU04_17210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU04_17210 PF03466 LysR substrate binding domain BXU04_17215 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BXU04_17220 PF01416 tRNA pseudouridine synthase BXU04_17245 PF02774 Semialdehyde dehydrogenase, dimerisation domain BXU04_17245 PF01118 Semialdehyde dehydrogenase, NAD binding domain BXU04_17250 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BXU04_17250 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BXU04_17255 PF01264 Chorismate synthase BXU04_17260 PF05175 Methyltransferase small domain BXU04_17265 PF02630 SCO1/SenC BXU04_17270 PF02666 Phosphatidylserine decarboxylase BXU04_17290 PF05872 Bacterial protein of unknown function (DUF853) BXU04_17300 PF05598 Transposase domain (DUF772) BXU04_17300 PF01609 Transposase DDE domain BXU04_17315 PF03449 Transcription elongation factor, N-terminal BXU04_17315 PF01272 Transcription elongation factor, GreA/GreB, C-term BXU04_17320 PF00919 Uncharacterized protein family UPF0004 BXU04_17320 PF04055 Radical SAM superfamily BXU04_17320 PF18693 TRAM domain BXU04_17325 PF01738 Dienelactone hydrolase family BXU04_17340 PF00692 dUTPase BXU04_17345 PF10609 NUBPL iron-transfer P-loop NTPase BXU04_17375 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BXU04_17375 PF07992 Pyridine nucleotide-disulphide oxidoreductase BXU04_17390 PF01266 FAD dependent oxidoreductase BXU04_17395 PF04235 Protein of unknown function (DUF418) BXU04_17400 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BXU04_17405 PF00877 NlpC/P60 family BXU04_17410 PF00877 NlpC/P60 family BXU04_17430 PF00245 Alkaline phosphatase BXU04_17435 PF11734 TilS substrate C-terminal domain BXU04_17435 PF09179 TilS substrate binding domain BXU04_17435 PF01171 PP-loop family BXU04_17440 PF02609 Exonuclease VII small subunit BXU04_17445 PF00348 Polyprenyl synthetase BXU04_17470 PF01523 Putative modulator of DNA gyrase BXU04_17475 PF04751 Protein of unknown function (DUF615) BXU04_17480 PF01523 Putative modulator of DNA gyrase BXU04_17490 PF13502 AsmA-like C-terminal region BXU04_17490 PF13116 Protein of unknown function BXU04_17495 PF00575 S1 RNA binding domain BXU04_17495 PF10150 Ribonuclease E/G family BXU04_17500 PF02545 Maf-like protein BXU04_17505 PF04402 Protein of unknown function (DUF541) BXU04_17530 PF02590 Predicted SPOUT methyltransferase BXU04_17555 PF01467 Cytidylyltransferase-like BXU04_17575 PF13603 Leucyl-tRNA synthetase, Domain 2 BXU04_17575 PF08264 Anticodon-binding domain of tRNA BXU04_17575 PF00133 tRNA synthetases class I (I, L, M and V) BXU04_17585 PF00085 Thioredoxin BXU04_17600 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_17660 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_17670 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BXU04_17670 PF00128 Alpha amylase, catalytic domain BXU04_17675 PF05598 Transposase domain (DUF772) BXU04_17675 PF01609 Transposase DDE domain BXU04_17680 PF05598 Transposase domain (DUF772) BXU04_17680 PF01609 Transposase DDE domain BXU04_17700 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_17705 PF00665 Integrase core domain BXU04_17705 PF13936 Helix-turn-helix domain BXU04_17775 PF00657 GDSL-like Lipase/Acylhydrolase BXU04_17775 PF03797 Autotransporter beta-domain BXU04_17785 PF05690 Thiazole biosynthesis protein ThiG BXU04_17790 PF02390 Putative methyltransferase BXU04_17795 PF03600 Citrate transporter BXU04_17795 PF02080 TrkA-C domain BXU04_17820 PF01557 Fumarylacetoacetate (FAA) hydrolase family BXU04_17825 PF01741 Large-conductance mechanosensitive channel, MscL BXU04_17840 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_17855 PF00588 SpoU rRNA Methylase family BXU04_17855 PF08032 RNA 2'-O ribose methyltransferase substrate binding BXU04_17885 PF11838 ERAP1-like C-terminal domain BXU04_17885 PF01433 Peptidase family M1 domain BXU04_17890 PF00873 AcrB/AcrD/AcrF family BXU04_17895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BXU04_17895 PF00529 HlyD membrane-fusion protein of T1SS BXU04_17900 PF00009 Elongation factor Tu GTP binding domain BXU04_17905 PF01507 Phosphoadenosine phosphosulfate reductase family BXU04_17910 PF00667 FAD binding domain BXU04_17910 PF00258 Flavodoxin BXU04_17910 PF00175 Oxidoreductase NAD-binding domain BXU04_17915 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BXU04_17915 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BXU04_17920 PF01507 Phosphoadenosine phosphosulfate reductase family BXU04_17965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU04_17965 PF03466 LysR substrate binding domain BXU04_17970 PF14824 Sirohaem biosynthesis protein central BXU04_17970 PF10414 Sirohaem synthase dimerisation region BXU04_17970 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BXU04_17975 PF00291 Pyridoxal-phosphate dependent enzyme BXU04_17990 PF01661 Macro domain BXU04_17995 PF00274 Fructose-bisphosphate aldolase class-I BXU04_18005 PF00224 Pyruvate kinase, barrel domain BXU04_18005 PF02887 Pyruvate kinase, alpha/beta domain BXU04_18010 PF13419 Haloacid dehalogenase-like hydrolase BXU04_18015 PF00162 Phosphoglycerate kinase BXU04_18050 PF18011 C-terminal domain found in long catalases BXU04_18050 PF06628 Catalase-related immune-responsive BXU04_18050 PF00199 Catalase BXU04_18075 PF01609 Transposase DDE domain BXU04_18075 PF05598 Transposase domain (DUF772) BXU04_18095 PF02311 AraC-like ligand binding domain BXU04_18095 PF12833 Helix-turn-helix domain BXU04_18110 PF05598 Transposase domain (DUF772) BXU04_18125 PF00326 Prolyl oligopeptidase family BXU04_18125 PF07676 WD40-like Beta Propeller Repeat BXU04_18125 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BXU04_18150 PF05598 Transposase domain (DUF772) BXU04_18150 PF01609 Transposase DDE domain BXU04_18155 PF03169 OPT oligopeptide transporter protein BXU04_18175 PF14579 Helix-hairpin-helix motif BXU04_18175 PF02811 PHP domain BXU04_18175 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BXU04_18175 PF07733 Bacterial DNA polymerase III alpha NTPase domain BXU04_18195 PF01726 LexA DNA binding domain BXU04_18195 PF00717 Peptidase S24-like BXU04_18225 PF13456 Reverse transcriptase-like BXU04_18225 PF00300 Histidine phosphatase superfamily (branch 1) BXU04_18260 PF11867 Domain of unknown function (DUF3387) BXU04_18260 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BXU04_18260 PF18766 SWI2/SNF2 ATPase BXU04_18275 PF01909 Nucleotidyltransferase domain BXU04_18280 PF08780 Nucleotidyltransferase substrate binding protein like BXU04_18285 PF02384 N-6 DNA Methylase BXU04_18305 PF04851 Type III restriction enzyme, res subunit BXU04_18305 PF00271 Helicase conserved C-terminal domain BXU04_18305 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BXU04_18305 PF08463 EcoEI R protein C-terminal BXU04_18315 PF02384 N-6 DNA Methylase BXU04_18320 PF01420 Type I restriction modification DNA specificity domain BXU04_18345 PF06715 Gp5 C-terminal repeat (3 copies) BXU04_18345 PF04717 Type VI secretion system, phage-baseplate injector BXU04_18385 PF06715 Gp5 C-terminal repeat (3 copies) BXU04_18385 PF04717 Type VI secretion system, phage-baseplate injector BXU04_18395 PF17871 AAA lid domain BXU04_18395 PF10431 C-terminal, D2-small domain, of ClpB protein BXU04_18395 PF07724 AAA domain (Cdc48 subfamily) BXU04_18395 PF00004 ATPase family associated with various cellular activities (AAA) BXU04_18405 PF05947 Type VI secretion system, TssF BXU04_18420 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath BXU04_18425 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 BXU04_18450 PF13296 Putative type VI secretion system Rhs element Vgr BXU04_18450 PF04717 Type VI secretion system, phage-baseplate injector BXU04_18450 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) BXU04_18460 PF04717 Type VI secretion system, phage-baseplate injector BXU04_18460 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) BXU04_18460 PF13296 Putative type VI secretion system Rhs element Vgr BXU04_18465 PF00182 Chitinase class I BXU04_18470 PF13296 Putative type VI secretion system Rhs element Vgr BXU04_18470 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) BXU04_18470 PF04717 Type VI secretion system, phage-baseplate injector BXU04_18530 PF04717 Type VI secretion system, phage-baseplate injector BXU04_18530 PF13296 Putative type VI secretion system Rhs element Vgr BXU04_18530 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) BXU04_18555 PF04717 Type VI secretion system, phage-baseplate injector BXU04_18565 PF01609 Transposase DDE domain BXU04_18565 PF05598 Transposase domain (DUF772) BXU04_18575 PF03781 Sulfatase-modifying factor enzyme 1 BXU04_18585 PF04717 Type VI secretion system, phage-baseplate injector BXU04_18585 PF06715 Gp5 C-terminal repeat (3 copies) BXU04_18600 PF04972 BON domain BXU04_18600 PF00691 OmpA family BXU04_18610 PF06761 Intracellular multiplication and human macrophage-killing BXU04_18610 PF14331 ImcF-related N-terminal domain BXU04_18610 PF06744 Type VI secretion protein IcmF C-terminal BXU04_18635 PF01527 Transposase BXU04_18640 PF02222 ATP-grasp domain BXU04_18665 PF00730 HhH-GPD superfamily base excision DNA repair protein BXU04_18690 PF00072 Response regulator receiver domain BXU04_18690 PF00196 Bacterial regulatory proteins, luxR family BXU04_18695 PF07730 Histidine kinase BXU04_18710 PF03775 Septum formation inhibitor MinC, C-terminal domain BXU04_18710 PF05209 Septum formation inhibitor MinC, N-terminal domain BXU04_18715 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BXU04_18720 PF03776 Septum formation topological specificity factor MinE BXU04_18730 PF08521 Two-component sensor kinase N-terminal BXU04_18730 PF00512 His Kinase A (phospho-acceptor) domain BXU04_18730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_18735 PF00486 Transcriptional regulatory protein, C terminal BXU04_18735 PF00072 Response regulator receiver domain BXU04_18740 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase BXU04_18750 PF08019 Phosphoethanolamine transferase EptA/EptB BXU04_18750 PF00884 Sulfatase BXU04_18770 PF00664 ABC transporter transmembrane region BXU04_18770 PF00005 ABC transporter BXU04_18770 PF03412 Peptidase C39 family BXU04_18790 PF02347 Glycine cleavage system P-protein BXU04_18825 PF01527 Transposase BXU04_18835 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_18850 PF01196 Ribosomal protein L17 BXU04_18855 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BXU04_18855 PF01000 RNA polymerase Rpb3/RpoA insert domain BXU04_18855 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BXU04_18860 PF00163 Ribosomal protein S4/S9 N-terminal domain BXU04_18860 PF01479 S4 domain BXU04_18865 PF00411 Ribosomal protein S11 BXU04_18870 PF00416 Ribosomal protein S13/S18 BXU04_18875 PF00344 SecY translocase BXU04_18880 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BXU04_18885 PF00327 Ribosomal protein L30p/L7e BXU04_18890 PF00333 Ribosomal protein S5, N-terminal domain BXU04_18890 PF03719 Ribosomal protein S5, C-terminal domain BXU04_18895 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BXU04_18900 PF00347 Ribosomal protein L6 BXU04_18905 PF00410 Ribosomal protein S8 BXU04_18910 PF00253 Ribosomal protein S14p/S29e BXU04_18915 PF00281 Ribosomal protein L5 BXU04_18915 PF00673 ribosomal L5P family C-terminus BXU04_18920 PF00467 KOW motif BXU04_18920 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BXU04_18925 PF00238 Ribosomal protein L14p/L23e BXU04_18930 PF00366 Ribosomal protein S17 BXU04_18935 PF00831 Ribosomal L29 protein BXU04_18940 PF00252 Ribosomal protein L16p/L10e BXU04_18945 PF07650 KH domain BXU04_18945 PF00189 Ribosomal protein S3, C-terminal domain BXU04_18950 PF00237 Ribosomal protein L22p/L17e BXU04_18955 PF00203 Ribosomal protein S19 BXU04_18960 PF03947 Ribosomal Proteins L2, C-terminal domain BXU04_18960 PF00181 Ribosomal Proteins L2, RNA binding domain BXU04_18965 PF00276 Ribosomal protein L23 BXU04_18970 PF00573 Ribosomal protein L4/L1 family BXU04_18975 PF00297 Ribosomal protein L3 BXU04_18980 PF00338 Ribosomal protein S10p/S20e BXU04_18990 PF03143 Elongation factor Tu C-terminal domain BXU04_18990 PF00009 Elongation factor Tu GTP binding domain BXU04_18990 PF03144 Elongation factor Tu domain 2 BXU04_18995 PF03144 Elongation factor Tu domain 2 BXU04_18995 PF00009 Elongation factor Tu GTP binding domain BXU04_18995 PF03764 Elongation factor G, domain IV BXU04_18995 PF14492 Elongation Factor G, domain II BXU04_18995 PF00679 Elongation factor G C-terminus BXU04_19000 PF00177 Ribosomal protein S7p/S5e BXU04_19005 PF00164 Ribosomal protein S12/S23 BXU04_19010 PF05000 RNA polymerase Rpb1, domain 4 BXU04_19010 PF04998 RNA polymerase Rpb1, domain 5 BXU04_19010 PF04997 RNA polymerase Rpb1, domain 1 BXU04_19010 PF04983 RNA polymerase Rpb1, domain 3 BXU04_19010 PF00623 RNA polymerase Rpb1, domain 2 BXU04_19015 PF04563 RNA polymerase beta subunit BXU04_19015 PF04561 RNA polymerase Rpb2, domain 2 BXU04_19015 PF04565 RNA polymerase Rpb2, domain 3 BXU04_19015 PF10385 RNA polymerase beta subunit external 1 domain BXU04_19015 PF00562 RNA polymerase Rpb2, domain 6 BXU04_19015 PF04560 RNA polymerase Rpb2, domain 7 BXU04_19020 PF00542 Ribosomal protein L7/L12 C-terminal domain BXU04_19020 PF16320 Ribosomal protein L7/L12 dimerisation domain BXU04_19025 PF00466 Ribosomal protein L10 BXU04_19030 PF00687 Ribosomal protein L1p/L10e family BXU04_19035 PF00298 Ribosomal protein L11, RNA binding domain BXU04_19035 PF03946 Ribosomal protein L11, N-terminal domain BXU04_19045 PF00467 KOW motif BXU04_19045 PF02357 Transcription termination factor nusG BXU04_19050 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BXU04_19060 PF03143 Elongation factor Tu C-terminal domain BXU04_19060 PF03144 Elongation factor Tu domain 2 BXU04_19060 PF00009 Elongation factor Tu GTP binding domain BXU04_19080 PF01926 50S ribosome-binding GTPase BXU04_19080 PF06071 Protein of unknown function (DUF933) BXU04_19085 PF01195 Peptidyl-tRNA hydrolase BXU04_19090 PF01386 Ribosomal L25p family BXU04_19090 PF14693 Ribosomal protein TL5, C-terminal domain BXU04_19095 PF14572 Phosphoribosyl synthetase-associated domain BXU04_19095 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BXU04_19105 PF00288 GHMP kinases N terminal domain BXU04_19105 PF08544 GHMP kinases C terminal BXU04_19110 PF03550 Outer membrane lipoprotein LolB BXU04_19120 PF01488 Shikimate / quinate 5-dehydrogenase BXU04_19120 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BXU04_19120 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BXU04_19125 PF03462 PCRF domain BXU04_19125 PF00472 RF-1 domain BXU04_19135 PF00994 Probable molybdopterin binding domain BXU04_19140 PF03976 Polyphosphate kinase 2 (PPK2) BXU04_19150 PF00708 Acylphosphatase BXU04_19155 PF08534 Redoxin BXU04_19160 PF03631 Virulence factor BrkB BXU04_19165 PF03358 NADPH-dependent FMN reductase BXU04_19180 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain BXU04_19180 PF17189 Glycosyl hydrolase family 30 beta sandwich domain BXU04_19190 PF04073 Aminoacyl-tRNA editing domain BXU04_19200 PF01063 Amino-transferase class IV BXU04_19230 PF02233 NAD(P) transhydrogenase beta subunit BXU04_19235 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BXU04_19255 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BXU04_19255 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BXU04_19255 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BXU04_19270 PF01367 5'-3' exonuclease, C-terminal SAM fold BXU04_19270 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BXU04_19270 PF00476 DNA polymerase family A BXU04_19270 PF01612 3'-5' exonuclease BXU04_19275 PF00293 NUDIX domain BXU04_19285 PF00561 alpha/beta hydrolase fold BXU04_19315 PF17827 PrmC N-terminal domain BXU04_19315 PF05175 Methyltransferase small domain BXU04_19320 PF00578 AhpC/TSA family BXU04_19320 PF10417 C-terminal domain of 1-Cys peroxiredoxin BXU04_19325 PF07992 Pyridine nucleotide-disulphide oxidoreductase BXU04_19325 PF13192 Thioredoxin domain BXU04_19330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU04_19330 PF03466 LysR substrate binding domain BXU04_19335 PF01272 Transcription elongation factor, GreA/GreB, C-term BXU04_19335 PF03449 Transcription elongation factor, N-terminal BXU04_19340 PF00923 Transaldolase/Fructose-6-phosphate aldolase BXU04_19370 PF01625 Peptide methionine sulfoxide reductase BXU04_19405 PF00462 Glutaredoxin BXU04_19410 PF13181 Tetratricopeptide repeat BXU04_19410 PF01435 Peptidase family M48 BXU04_19415 PF00072 Response regulator receiver domain BXU04_19415 PF00486 Transcriptional regulatory protein, C terminal BXU04_19420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_19420 PF00512 His Kinase A (phospho-acceptor) domain BXU04_19420 PF00989 PAS fold BXU04_19420 PF11808 Phosphate regulon sensor protein PhoR BXU04_19425 PF02503 Polyphosphate kinase middle domain BXU04_19425 PF17941 Polyphosphate kinase C-terminal domain 1 BXU04_19425 PF13089 Polyphosphate kinase N-terminal domain BXU04_19425 PF13090 Polyphosphate kinase C-terminal domain 2 BXU04_19430 PF02541 Ppx/GppA phosphatase family BXU04_19435 PF13439 Glycosyltransferase Family 4 BXU04_19435 PF00534 Glycosyl transferases group 1 BXU04_19440 PF01569 PAP2 superfamily BXU04_19445 PF00149 Calcineurin-like phosphoesterase BXU04_19465 PF04305 Protein of unknown function (DUF455) BXU04_19470 PF00156 Phosphoribosyl transferase domain BXU04_19485 PF08245 Mur ligase middle domain BXU04_19485 PF02875 Mur ligase family, glutamate ligase domain BXU04_19495 PF00300 Histidine phosphatase superfamily (branch 1) BXU04_19500 PF10459 Peptidase S46 BXU04_19520 PF00107 Zinc-binding dehydrogenase BXU04_19520 PF08240 Alcohol dehydrogenase GroES-like domain BXU04_19530 PF00005 ABC transporter BXU04_19530 PF17850 CysA C-terminal regulatory domain BXU04_19530 PF12857 TOBE-like domain BXU04_19535 PF00528 Binding-protein-dependent transport system inner membrane component BXU04_19540 PF00528 Binding-protein-dependent transport system inner membrane component BXU04_19550 PF00155 Aminotransferase class I and II BXU04_19560 PF00849 RNA pseudouridylate synthase BXU04_19570 PF05736 OprF membrane domain BXU04_19570 PF00691 OmpA family BXU04_19580 PF00107 Zinc-binding dehydrogenase BXU04_19580 PF08240 Alcohol dehydrogenase GroES-like domain BXU04_19585 PF07992 Pyridine nucleotide-disulphide oxidoreductase BXU04_19585 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BXU04_19600 PF13276 HTH-like domain BXU04_19640 PF00072 Response regulator receiver domain BXU04_19640 PF00672 HAMP domain BXU04_19640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_19640 PF00512 His Kinase A (phospho-acceptor) domain BXU04_19640 PF17149 Periplasmic sensor domain found in signal transduction proteins BXU04_19640 PF01627 Hpt domain BXU04_19645 PF00072 Response regulator receiver domain BXU04_19645 PF00990 Diguanylate cyclase, GGDEF domain BXU04_19665 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BXU04_19665 PF00749 tRNA synthetases class I (E and Q), catalytic domain BXU04_19675 PF00665 Integrase core domain BXU04_19675 PF13936 Helix-turn-helix domain BXU04_19685 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_19730 PF01728 FtsJ-like methyltransferase BXU04_19730 PF18125 RlmM ferredoxin-like domain BXU04_19735 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BXU04_19735 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BXU04_19740 PF08450 SMP-30/Gluconolactonase/LRE-like region BXU04_19760 PF00378 Enoyl-CoA hydratase/isomerase BXU04_19765 PF00171 Aldehyde dehydrogenase family BXU04_19770 PF13193 AMP-binding enzyme C-terminal domain BXU04_19770 PF00501 AMP-binding enzyme BXU04_19775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU04_19775 PF03466 LysR substrate binding domain BXU04_19785 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BXU04_19815 PF01494 FAD binding domain BXU04_19820 PF01494 FAD binding domain BXU04_19830 PF01923 Cobalamin adenosyltransferase BXU04_19835 PF00850 Histone deacetylase domain BXU04_19840 PF03968 OstA-like protein BXU04_19840 PF04453 LPS transport system D BXU04_19845 PF00639 PPIC-type PPIASE domain BXU04_19845 PF09312 SurA N-terminal domain BXU04_19850 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BXU04_19860 PF00398 Ribosomal RNA adenine dimethylase BXU04_19865 PF04379 ApaG domain BXU04_19870 PF00149 Calcineurin-like phosphoesterase BXU04_19875 PF00186 Dihydrofolate reductase BXU04_19885 PF00303 Thymidylate synthase BXU04_19890 PF01790 Prolipoprotein diacylglyceryl transferase BXU04_19910 PF01219 Prokaryotic diacylglycerol kinase BXU04_19925 PF08521 Two-component sensor kinase N-terminal BXU04_19925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_19925 PF00512 His Kinase A (phospho-acceptor) domain BXU04_19930 PF00072 Response regulator receiver domain BXU04_19930 PF00486 Transcriptional regulatory protein, C terminal BXU04_19935 PF13472 GDSL-like Lipase/Acylhydrolase family BXU04_19940 PF00005 ABC transporter BXU04_19950 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BXU04_20000 PF00248 Aldo/keto reductase family BXU04_20010 PF07670 Nucleoside recognition BXU04_20010 PF07662 Na+ dependent nucleoside transporter C-terminus BXU04_20010 PF01773 Na+ dependent nucleoside transporter N-terminus BXU04_20015 PF00294 pfkB family carbohydrate kinase BXU04_20030 PF01207 Dihydrouridine synthase (Dus) BXU04_20045 PF02773 S-adenosylmethionine synthetase, C-terminal domain BXU04_20045 PF02772 S-adenosylmethionine synthetase, central domain BXU04_20045 PF00438 S-adenosylmethionine synthetase, N-terminal domain BXU04_20055 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_20060 PF00328 Histidine phosphatase superfamily (branch 2) BXU04_20080 PF00311 Phosphoenolpyruvate carboxylase BXU04_20090 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BXU04_20090 PF05221 S-adenosyl-L-homocysteine hydrolase BXU04_20095 PF13649 Methyltransferase domain BXU04_20130 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BXU04_20145 PF09286 Pro-kumamolisin, activation domain BXU04_20145 PF00082 Subtilase family BXU04_20150 PF00698 Acyl transferase domain BXU04_20150 PF08240 Alcohol dehydrogenase GroES-like domain BXU04_20150 PF16197 Ketoacyl-synthetase C-terminal extension BXU04_20150 PF00109 Beta-ketoacyl synthase, N-terminal domain BXU04_20150 PF02801 Beta-ketoacyl synthase, C-terminal domain BXU04_20150 PF08659 KR domain BXU04_20150 PF00550 Phosphopantetheine attachment site BXU04_20150 PF14765 Polyketide synthase dehydratase BXU04_20150 PF00107 Zinc-binding dehydrogenase BXU04_20165 PF02219 Methylenetetrahydrofolate reductase BXU04_20180 PF00293 NUDIX domain BXU04_20190 PF07517 SecA DEAD-like domain BXU04_20190 PF01043 SecA preprotein cross-linking domain BXU04_20190 PF07516 SecA Wing and Scaffold domain BXU04_20190 PF02810 SEC-C motif BXU04_20195 PF01476 LysM domain BXU04_20195 PF01551 Peptidase family M23 BXU04_20205 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BXU04_20210 PF12327 FtsZ family, C-terminal domain BXU04_20210 PF00091 Tubulin/FtsZ family, GTPase domain BXU04_20215 PF02491 SHS2 domain inserted in FTSA BXU04_20220 PF03799 Cell division protein FtsQ BXU04_20220 PF08478 POTRA domain, FtsQ-type BXU04_20225 PF01820 D-ala D-ala ligase N-terminus BXU04_20225 PF07478 D-ala D-ala ligase C-terminus BXU04_20230 PF01225 Mur ligase family, catalytic domain BXU04_20230 PF02875 Mur ligase family, glutamate ligase domain BXU04_20230 PF08245 Mur ligase middle domain BXU04_20235 PF04101 Glycosyltransferase family 28 C-terminal domain BXU04_20235 PF03033 Glycosyltransferase family 28 N-terminal domain BXU04_20240 PF01098 Cell cycle protein BXU04_20245 PF00953 Glycosyl transferase family 4 BXU04_20250 PF01225 Mur ligase family, catalytic domain BXU04_20250 PF02875 Mur ligase family, glutamate ligase domain BXU04_20250 PF08245 Mur ligase middle domain BXU04_20255 PF01225 Mur ligase family, catalytic domain BXU04_20255 PF02875 Mur ligase family, glutamate ligase domain BXU04_20255 PF08245 Mur ligase middle domain BXU04_20260 PF00905 Penicillin binding protein transpeptidase domain BXU04_20260 PF03717 Penicillin-binding Protein dimerisation domain BXU04_20265 PF04999 Cell division protein FtsL BXU04_20270 PF01795 MraW methylase family BXU04_20275 PF02381 MraZ protein, putative antitoxin-like BXU04_20295 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BXU04_20305 PF02021 Uncharacterised protein family UPF0102 BXU04_20310 PF04307 LexA-binding, inner membrane-associated putative hydrolase BXU04_20315 PF01565 FAD binding domain BXU04_20315 PF02913 FAD linked oxidases, C-terminal domain BXU04_20320 PF00486 Transcriptional regulatory protein, C terminal BXU04_20320 PF00072 Response regulator receiver domain BXU04_20325 PF02702 Osmosensitive K+ channel His kinase sensor domain BXU04_20325 PF13493 Domain of unknown function (DUF4118) BXU04_20325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_20325 PF00512 His Kinase A (phospho-acceptor) domain BXU04_20325 PF13492 GAF domain BXU04_20330 PF02669 K+-transporting ATPase, c chain BXU04_20340 PF03814 Potassium-transporting ATPase A subunit BXU04_20365 PF02769 AIR synthase related protein, C-terminal domain BXU04_20365 PF00586 AIR synthase related protein, N-terminal domain BXU04_20370 PF01029 NusB family BXU04_20375 PF00885 6,7-dimethyl-8-ribityllumazine synthase BXU04_20380 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BXU04_20380 PF00925 GTP cyclohydrolase II BXU04_20385 PF00677 Lumazine binding domain BXU04_20395 PF01872 RibD C-terminal domain BXU04_20395 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BXU04_20405 PF03477 ATP cone domain BXU04_20415 PF00464 Serine hydroxymethyltransferase BXU04_20435 PF12848 ABC transporter BXU04_20435 PF00005 ABC transporter BXU04_20455 PF00756 Putative esterase BXU04_20465 PF08240 Alcohol dehydrogenase GroES-like domain BXU04_20465 PF00107 Zinc-binding dehydrogenase BXU04_20470 PF02583 Metal-sensitive transcriptional repressor BXU04_20480 PF00072 Response regulator receiver domain BXU04_20480 PF00486 Transcriptional regulatory protein, C terminal BXU04_20485 PF00672 HAMP domain BXU04_20485 PF00512 His Kinase A (phospho-acceptor) domain BXU04_20485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_20485 PF16527 Two-component sensor protein CpxA, periplasmic domain BXU04_20525 PF00672 HAMP domain BXU04_20525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_20525 PF00512 His Kinase A (phospho-acceptor) domain BXU04_20530 PF04107 Glutamate-cysteine ligase family 2(GCS2) BXU04_20550 PF01926 50S ribosome-binding GTPase BXU04_20555 PF00034 Cytochrome c BXU04_20580 PF13276 HTH-like domain BXU04_20580 PF13683 Integrase core domain BXU04_20595 PF05598 Transposase domain (DUF772) BXU04_20595 PF01609 Transposase DDE domain BXU04_20600 PF00291 Pyridoxal-phosphate dependent enzyme BXU04_20600 PF13291 ACT domain BXU04_20605 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_20615 PF05598 Transposase domain (DUF772) BXU04_20615 PF01609 Transposase DDE domain BXU04_20625 PF01527 Transposase BXU04_20655 PF01743 Poly A polymerase head domain BXU04_20655 PF01966 HD domain BXU04_20655 PF12627 Probable RNA and SrmB- binding site of polymerase A BXU04_20670 PF05598 Transposase domain (DUF772) BXU04_20670 PF01609 Transposase DDE domain BXU04_20680 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_20720 PF14883 Hypothetical glycosyl hydrolase family 13 BXU04_20720 PF01522 Polysaccharide deacetylase BXU04_20725 PF00535 Glycosyl transferase family 2 BXU04_20735 PF01979 Amidohydrolase family BXU04_20740 PF01380 SIS domain BXU04_20745 PF00356 Bacterial regulatory proteins, lacI family BXU04_20750 PF07690 Major Facilitator Superfamily BXU04_20755 PF00392 Bacterial regulatory proteins, gntR family BXU04_20755 PF07702 UTRA domain BXU04_20770 PF00703 Glycosyl hydrolases family 2 BXU04_20770 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BXU04_20770 PF02837 Glycosyl hydrolases family 2, sugar binding domain BXU04_20770 PF16355 Domain of unknown function (DUF4982) BXU04_20770 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 BXU04_20815 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BXU04_20820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_20820 PF00512 His Kinase A (phospho-acceptor) domain BXU04_20825 PF00072 Response regulator receiver domain BXU04_20830 PF01590 GAF domain BXU04_20830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_20830 PF00512 His Kinase A (phospho-acceptor) domain BXU04_20830 PF08446 PAS fold BXU04_20830 PF00360 Phytochrome region BXU04_20835 PF04972 BON domain BXU04_20840 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BXU04_20840 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BXU04_20845 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BXU04_20845 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BXU04_20880 PF01467 Cytidylyltransferase-like BXU04_20880 PF00293 NUDIX domain BXU04_20890 PF11818 C-terminal domain of tail specific protease (DUF3340) BXU04_20890 PF00595 PDZ domain BXU04_20890 PF03572 Peptidase family S41 BXU04_20890 PF17804 Tail specific protease N-terminal domain BXU04_20895 PF04055 Radical SAM superfamily BXU04_20895 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BXU04_20900 PF03099 Biotin/lipoate A/B protein ligase family BXU04_20905 PF04359 Protein of unknown function (DUF493) BXU04_20915 PF07943 Penicillin-binding protein 5, C-terminal domain BXU04_20915 PF00768 D-alanyl-D-alanine carboxypeptidase BXU04_20925 PF05036 Sporulation related domain BXU04_20925 PF03330 Lytic transglycolase BXU04_20930 PF13406 Transglycosylase SLT domain BXU04_20960 PF05257 CHAP domain BXU04_20960 PF01476 LysM domain BXU04_20975 PF01098 Cell cycle protein BXU04_20980 PF00905 Penicillin binding protein transpeptidase domain BXU04_20980 PF03717 Penicillin-binding Protein dimerisation domain BXU04_20990 PF04085 rod shape-determining protein MreC BXU04_21000 PF00294 pfkB family carbohydrate kinase BXU04_21020 PF13673 Acetyltransferase (GNAT) domain BXU04_21030 PF13533 Biotin-lipoyl like BXU04_21040 PF01209 ubiE/COQ5 methyltransferase family BXU04_21045 PF00990 Diguanylate cyclase, GGDEF domain BXU04_21045 PF08448 PAS fold BXU04_21050 PF01433 Peptidase family M1 domain BXU04_21050 PF11838 ERAP1-like C-terminal domain BXU04_21065 PF00004 ATPase family associated with various cellular activities (AAA) BXU04_21065 PF07724 AAA domain (Cdc48 subfamily) BXU04_21065 PF10431 C-terminal, D2-small domain, of ClpB protein BXU04_21070 PF00227 Proteasome subunit BXU04_21080 PF00589 Phage integrase family BXU04_21080 PF02899 Phage integrase, N-terminal SAM-like domain BXU04_21090 PF01678 Diaminopimelate epimerase BXU04_21105 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BXU04_21105 PF00326 Prolyl oligopeptidase family BXU04_21110 PF00155 Aminotransferase class I and II BXU04_21125 PF00326 Prolyl oligopeptidase family BXU04_21125 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BXU04_21155 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BXU04_21155 PF03900 Porphobilinogen deaminase, C-terminal domain BXU04_21160 PF04397 LytTr DNA-binding domain BXU04_21160 PF00072 Response regulator receiver domain BXU04_21165 PF07694 5TMR of 5TMR-LYT BXU04_21165 PF06580 Histidine kinase BXU04_21175 PF13632 Glycosyl transferase family group 2 BXU04_21205 PF01740 STAS domain BXU04_21205 PF00916 Sulfate permease family BXU04_21210 PF00553 Cellulose binding domain BXU04_21210 PF00150 Cellulase (glycosyl hydrolase family 5) BXU04_21225 PF00563 EAL domain BXU04_21225 PF00990 Diguanylate cyclase, GGDEF domain BXU04_21225 PF03707 Bacterial signalling protein N terminal repeat BXU04_21250 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_21270 PF01204 Trehalase BXU04_21290 PF01544 CorA-like Mg2+ transporter protein BXU04_21300 PF00324 Amino acid permease BXU04_21310 PF00553 Cellulose binding domain BXU04_21310 PF00041 Fibronectin type III domain BXU04_21310 PF01341 Glycosyl hydrolases family 6 BXU04_21315 PF03330 Lytic transglycolase BXU04_21320 PF00892 EamA-like transporter family BXU04_21340 PF07759 Protein of unknown function (DUF1615) BXU04_21380 PF00106 short chain dehydrogenase BXU04_21405 PF04715 Anthranilate synthase component I, N terminal region BXU04_21405 PF00425 chorismate binding enzyme BXU04_21410 PF00781 Diacylglycerol kinase catalytic domain BXU04_21415 PF00583 Acetyltransferase (GNAT) family BXU04_21420 PF00834 Ribulose-phosphate 3 epimerase family BXU04_21425 PF00226 DnaJ domain BXU04_21425 PF05099 Tellurite resistance protein TerB BXU04_21430 PF01259 SAICAR synthetase BXU04_21445 PF01447 Thermolysin metallopeptidase, catalytic domain BXU04_21445 PF02868 Thermolysin metallopeptidase, alpha-helical domain BXU04_21445 PF07504 Fungalysin/Thermolysin Propeptide Motif BXU04_21445 PF01483 Proprotein convertase P-domain BXU04_21450 PF07504 Fungalysin/Thermolysin Propeptide Motif BXU04_21450 PF01483 Proprotein convertase P-domain BXU04_21450 PF01447 Thermolysin metallopeptidase, catalytic domain BXU04_21450 PF02868 Thermolysin metallopeptidase, alpha-helical domain BXU04_21455 PF07504 Fungalysin/Thermolysin Propeptide Motif BXU04_21455 PF03413 Peptidase propeptide and YPEB domain BXU04_21455 PF01447 Thermolysin metallopeptidase, catalytic domain BXU04_21455 PF02868 Thermolysin metallopeptidase, alpha-helical domain BXU04_21470 PF13244 Domain of unknown function (DUF4040) BXU04_21470 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BXU04_21470 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BXU04_21470 PF00361 Proton-conducting membrane transporter BXU04_21475 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BXU04_21480 PF00361 Proton-conducting membrane transporter BXU04_21490 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BXU04_21495 PF03334 Na+/H+ antiporter subunit BXU04_21500 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_21515 PF05598 Transposase domain (DUF772) BXU04_21515 PF01609 Transposase DDE domain BXU04_21525 PF04209 homogentisate 1,2-dioxygenase BXU04_21530 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BXU04_21535 PF01047 MarR family BXU04_21545 PF00854 POT family BXU04_21550 PF03301 Tryptophan 2,3-dioxygenase BXU04_21560 PF00676 Dehydrogenase E1 component BXU04_21590 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_21600 PF00108 Thiolase, N-terminal domain BXU04_21600 PF02803 Thiolase, C-terminal domain BXU04_21655 PF05598 Transposase domain (DUF772) BXU04_21655 PF01609 Transposase DDE domain BXU04_21685 PF01427 D-ala-D-ala dipeptidase BXU04_21690 PF01510 N-acetylmuramoyl-L-alanine amidase BXU04_21700 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BXU04_21700 PF13378 Enolase C-terminal domain-like BXU04_21745 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_21755 PF13520 Amino acid permease BXU04_21770 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_21790 PF05360 yiaA/B two helix domain BXU04_21795 PF05598 Transposase domain (DUF772) BXU04_21795 PF01609 Transposase DDE domain BXU04_21800 PF07995 Glucose / Sorbosone dehydrogenase BXU04_21830 PF13936 Helix-turn-helix domain BXU04_21830 PF00665 Integrase core domain BXU04_21835 PF00933 Glycosyl hydrolase family 3 N terminal domain BXU04_21835 PF01915 Glycosyl hydrolase family 3 C-terminal domain BXU04_21835 PF14310 Fibronectin type III-like domain BXU04_21840 PF02152 Dihydroneopterin aldolase BXU04_21845 PF00814 Glycoprotease family BXU04_21850 PF01165 Ribosomal protein S21 BXU04_21855 PF09424 Yqey-like protein BXU04_21865 PF03631 Virulence factor BrkB BXU04_21870 PF01807 CHC2 zinc finger BXU04_21870 PF08275 DNA primase catalytic core, N-terminal domain BXU04_21870 PF08278 DNA primase DnaG DnaB-binding BXU04_21870 PF10410 DnaB-helicase binding domain of primase BXU04_21885 PF13593 SBF-like CPA transporter family (DUF4137) BXU04_21900 PF01040 UbiA prenyltransferase family BXU04_21925 PF00510 Cytochrome c oxidase subunit III BXU04_21930 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 BXU04_21935 PF00115 Cytochrome C and Quinol oxidase polypeptide I BXU04_21940 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BXU04_21940 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BXU04_21950 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BXU04_21950 PF14850 DNA-binding domain of Proline dehydrogenase BXU04_21950 PF01619 Proline dehydrogenase BXU04_21950 PF00171 Aldehyde dehydrogenase family BXU04_21970 PF00210 Ferritin-like domain BXU04_21980 PF00293 NUDIX domain BXU04_21995 PF00380 Ribosomal protein S9/S16 BXU04_22000 PF00572 Ribosomal protein L13 BXU04_22005 PF03232 Ubiquinone biosynthesis protein COQ7 BXU04_22010 PF00893 Small Multidrug Resistance protein BXU04_22015 PF02675 S-adenosylmethionine decarboxylase BXU04_22020 PF00027 Cyclic nucleotide-binding domain BXU04_22020 PF00325 Bacterial regulatory proteins, crp family BXU04_22030 PF00218 Indole-3-glycerol phosphate synthase BXU04_22035 PF02885 Glycosyl transferase family, helical bundle domain BXU04_22035 PF00591 Glycosyl transferase family, a/b domain BXU04_22050 PF00117 Glutamine amidotransferase class-I BXU04_22065 PF13683 Integrase core domain BXU04_22065 PF13276 HTH-like domain BXU04_22080 PF03971 Monomeric isocitrate dehydrogenase BXU04_22090 PF05598 Transposase domain (DUF772) BXU04_22145 PF01609 Transposase DDE domain BXU04_22145 PF05598 Transposase domain (DUF772) BXU04_22155 PF00872 Transposase, Mutator family BXU04_22165 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BXU04_22165 PF14489 QueF-like protein BXU04_22175 PF01546 Peptidase family M20/M25/M40 BXU04_22175 PF07687 Peptidase dimerisation domain BXU04_22180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BXU04_22185 PF00873 AcrB/AcrD/AcrF family BXU04_22190 PF00873 AcrB/AcrD/AcrF family BXU04_22200 PF07063 Domain of unknown function (DUF1338) BXU04_22240 PF00581 Rhodanese-like domain BXU04_22245 PF02556 Preprotein translocase subunit SecB BXU04_22250 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BXU04_22250 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BXU04_22260 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BXU04_22260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BXU04_22260 PF00205 Thiamine pyrophosphate enzyme, central domain BXU04_22265 PF00512 His Kinase A (phospho-acceptor) domain BXU04_22265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_22270 PF02954 Bacterial regulatory protein, Fis family BXU04_22270 PF00072 Response regulator receiver domain BXU04_22270 PF00158 Sigma-54 interaction domain BXU04_22285 PF07690 Major Facilitator Superfamily BXU04_22290 PF00588 SpoU rRNA Methylase family BXU04_22305 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BXU04_22305 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BXU04_22310 PF02661 Fic/DOC family BXU04_22310 PF13784 Fic/DOC family N-terminal BXU04_22315 PF01555 DNA methylase BXU04_22325 PF00561 alpha/beta hydrolase fold BXU04_22330 PF03692 Putative zinc- or iron-chelating domain BXU04_22335 PF00501 AMP-binding enzyme BXU04_22340 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BXU04_22355 PF05598 Transposase domain (DUF772) BXU04_22365 PF11871 Domain of unknown function (DUF3391) BXU04_22365 PF01966 HD domain BXU04_22370 PF07690 Major Facilitator Superfamily BXU04_22400 PF00132 Bacterial transferase hexapeptide (six repeats) BXU04_22405 PF03692 Putative zinc- or iron-chelating domain BXU04_22410 PF00920 Dehydratase family BXU04_22415 PF00589 Phage integrase family BXU04_22415 PF13495 Phage integrase, N-terminal SAM-like domain BXU04_22420 PF05598 Transposase domain (DUF772) BXU04_22440 PF01609 Transposase DDE domain BXU04_22440 PF05598 Transposase domain (DUF772) BXU04_22450 PF01218 Coproporphyrinogen III oxidase BXU04_22465 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BXU04_22465 PF00476 DNA polymerase family A BXU04_22465 PF01612 3'-5' exonuclease BXU04_22465 PF01367 5'-3' exonuclease, C-terminal SAM fold BXU04_22495 PF01966 HD domain BXU04_22495 PF13286 Phosphohydrolase-associated domain BXU04_22500 PF17831 Pyruvate dehydrogenase E1 component middle domain BXU04_22500 PF00456 Transketolase, thiamine diphosphate binding domain BXU04_22520 PF05598 Transposase domain (DUF772) BXU04_22535 PF01527 Transposase BXU04_22565 PF04264 YceI-like domain BXU04_22570 PF00881 Nitroreductase family BXU04_22600 PF02592 Putative vitamin uptake transporter BXU04_22605 PF03710 Glutamate-ammonia ligase adenylyltransferase BXU04_22605 PF08335 GlnD PII-uridylyltransferase BXU04_22615 PF08450 SMP-30/Gluconolactonase/LRE-like region BXU04_22660 PF00793 DAHP synthetase I family BXU04_22675 PF00593 TonB dependent receptor BXU04_22675 PF07715 TonB-dependent Receptor Plug Domain BXU04_22685 PF00118 TCP-1/cpn60 chaperonin family BXU04_22690 PF00166 Chaperonin 10 Kd subunit BXU04_22710 PF07992 Pyridine nucleotide-disulphide oxidoreductase BXU04_22720 PF04542 Sigma-70 region 2 BXU04_22720 PF04545 Sigma-70, region 4 BXU04_22725 PF03167 Uracil DNA glycosylase superfamily BXU04_22730 PF01339 CheB methylesterase BXU04_22730 PF00072 Response regulator receiver domain BXU04_22735 PF18075 FtsX extracellular domain BXU04_22740 PF00005 ABC transporter BXU04_22745 PF00271 Helicase conserved C-terminal domain BXU04_22745 PF12300 ATP-dependent RNA helicase RhlB BXU04_22745 PF00270 DEAD/DEAH box helicase BXU04_22750 PF00085 Thioredoxin BXU04_22755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BXU04_22755 PF07498 Rho termination factor, N-terminal domain BXU04_22755 PF07497 Rho termination factor, RNA-binding domain BXU04_22760 PF13276 HTH-like domain BXU04_22760 PF13683 Integrase core domain BXU04_22765 PF13276 HTH-like domain BXU04_22770 PF01527 Transposase BXU04_22780 PF01103 Surface antigen BXU04_22780 PF17243 POTRA domain TamA domain 1 BXU04_22785 PF04357 TamB, inner membrane protein subunit of TAM complex BXU04_22825 PF07977 FabA-like domain BXU04_22830 PF01553 Acyltransferase BXU04_22840 PF00550 Phosphopantetheine attachment site BXU04_22845 PF04820 Tryptophan halogenase BXU04_22900 PF01638 HxlR-like helix-turn-helix BXU04_22905 PF05368 NmrA-like family BXU04_22920 PF03812 2-keto-3-deoxygluconate permease BXU04_22925 PF08267 Cobalamin-independent synthase, N-terminal domain BXU04_22925 PF01717 Cobalamin-independent synthase, Catalytic domain BXU04_22935 PF03358 NADPH-dependent FMN reductase BXU04_22940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU04_22940 PF03466 LysR substrate binding domain BXU04_22945 PF02677 Epoxyqueuosine reductase QueH BXU04_22960 PF00512 His Kinase A (phospho-acceptor) domain BXU04_22960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_22960 PF00672 HAMP domain BXU04_22965 PF00512 His Kinase A (phospho-acceptor) domain BXU04_22965 PF00672 HAMP domain BXU04_22965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_22970 PF00072 Response regulator receiver domain BXU04_22970 PF00486 Transcriptional regulatory protein, C terminal BXU04_22975 PF00551 Formyl transferase BXU04_22995 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BXU04_22995 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BXU04_23000 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BXU04_23005 PF02146 Sir2 family BXU04_23015 PF07690 Major Facilitator Superfamily BXU04_23020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU04_23020 PF03466 LysR substrate binding domain BXU04_23040 PF01026 TatD related DNase BXU04_23075 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_23095 PF00266 Aminotransferase class-V BXU04_23110 PF01014 Uricase BXU04_23110 PF09349 OHCU decarboxylase BXU04_23135 PF13683 Integrase core domain BXU04_23135 PF13276 HTH-like domain BXU04_23140 PF13276 HTH-like domain BXU04_23165 PF00326 Prolyl oligopeptidase family BXU04_23170 PF02785 Biotin carboxylase C-terminal domain BXU04_23170 PF00289 Biotin carboxylase, N-terminal domain BXU04_23170 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BXU04_23170 PF00364 Biotin-requiring enzyme BXU04_23170 PF18140 Propionyl-coenzyme A carboxylase BT domain BXU04_23175 PF01039 Carboxyl transferase domain BXU04_23180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BXU04_23180 PF02770 Acyl-CoA dehydrogenase, middle domain BXU04_23180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BXU04_23235 PF07683 Cobalamin synthesis protein cobW C-terminal domain BXU04_23235 PF02492 CobW/HypB/UreG, nucleotide-binding domain BXU04_23255 PF03969 AFG1-like ATPase BXU04_23270 PF00593 TonB dependent receptor BXU04_23270 PF07715 TonB-dependent Receptor Plug Domain BXU04_23275 PF13181 Tetratricopeptide repeat BXU04_23280 PF05746 DALR anticodon binding domain BXU04_23280 PF02092 Glycyl-tRNA synthetase beta subunit BXU04_23285 PF02091 Glycyl-tRNA synthetase alpha subunit BXU04_23290 PF00437 Type II/IV secretion system protein BXU04_23290 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BXU04_23315 PF00958 GMP synthase C terminal domain BXU04_23315 PF00117 Glutamine amidotransferase class-I BXU04_23325 PF00902 Sec-independent protein translocase protein (TatC) BXU04_23330 PF02416 mttA/Hcf106 family BXU04_23335 PF02416 mttA/Hcf106 family BXU04_23345 PF00762 Ferrochelatase BXU04_23375 PF04381 Putative exonuclease, RdgC BXU04_23380 PF01171 PP-loop family BXU04_23395 PF00356 Bacterial regulatory proteins, lacI family BXU04_23400 PF03648 Glycosyl hydrolase family 67 N-terminus BXU04_23400 PF07488 Glycosyl hydrolase family 67 middle domain BXU04_23400 PF07477 Glycosyl hydrolase family 67 C-terminus BXU04_23410 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BXU04_23410 PF13378 Enolase C-terminal domain-like BXU04_23415 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BXU04_23415 PF04616 Glycosyl hydrolases family 43 BXU04_23420 PF01915 Glycosyl hydrolase family 3 C-terminal domain BXU04_23420 PF07691 PA14 domain BXU04_23420 PF14310 Fibronectin type III-like domain BXU04_23420 PF00933 Glycosyl hydrolase family 3 N terminal domain BXU04_23425 PF08125 Mannitol dehydrogenase C-terminal domain BXU04_23425 PF01232 Mannitol dehydrogenase Rossmann domain BXU04_23445 PF02614 Glucuronate isomerase BXU04_23450 PF00331 Glycosyl hydrolase family 10 BXU04_23450 PF03422 Carbohydrate binding module (family 6) BXU04_23450 PF00553 Cellulose binding domain BXU04_23480 PF04616 Glycosyl hydrolases family 43 BXU04_23515 PF13340 Putative transposase of IS4/5 family (DUF4096) BXU04_23525 PF00563 EAL domain BXU04_23525 PF12792 CSS motif domain associated with EAL BXU04_23530 PF00487 Fatty acid desaturase BXU04_23535 PF00111 2Fe-2S iron-sulfur cluster binding domain BXU04_23535 PF00970 Oxidoreductase FAD-binding domain BXU04_23535 PF00175 Oxidoreductase NAD-binding domain BXU04_23540 PF00440 Bacterial regulatory proteins, tetR family BXU04_23575 PF01047 MarR family BXU04_23580 PF02566 OsmC-like protein BXU04_23675 PF01381 Helix-turn-helix BXU04_23680 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB BXU04_23685 PF13538 UvrD-like helicase C-terminal domain BXU04_23690 PF12705 PD-(D/E)XK nuclease superfamily BXU04_23690 PF13361 UvrD-like helicase C-terminal domain BXU04_23690 PF00580 UvrD/REP helicase N-terminal domain BXU04_23695 PF17946 RecC C-terminal domain BXU04_23735 PF00080 Copper/zinc superoxide dismutase (SODC) BXU04_23740 PF00080 Copper/zinc superoxide dismutase (SODC) BXU04_23745 PF00158 Sigma-54 interaction domain BXU04_23745 PF00072 Response regulator receiver domain BXU04_23745 PF02954 Bacterial regulatory protein, Fis family BXU04_23750 PF00989 PAS fold BXU04_23750 PF00512 His Kinase A (phospho-acceptor) domain BXU04_23750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU04_23755 PF00909 Ammonium Transporter Family BXU04_23760 PF00543 Nitrogen regulatory protein P-II BXU04_23765 PF00120 Glutamine synthetase, catalytic domain BXU04_23765 PF03951 Glutamine synthetase, beta-Grasp domain BXU04_23770 PF02673 Bacitracin resistance protein BacA BXU04_23810 PF03061 Thioesterase superfamily BXU04_23815 PF13091 PLD-like domain BXU04_23830 PF01883 Iron-sulfur cluster assembly protein BXU04_23830 PF10609 NUBPL iron-transfer P-loop NTPase BXU04_23850 PF01381 Helix-turn-helix BXU04_23855 PF13657 HipA N-terminal domain BXU04_23855 PF07804 HipA-like C-terminal domain BXU04_23860 PF10017 Histidine-specific methyltransferase, SAM-dependent BXU04_23865 PF12867 DinB superfamily BXU04_23865 PF03781 Sulfatase-modifying factor enzyme 1 BXU04_23875 PF00528 Binding-protein-dependent transport system inner membrane component BXU04_23880 PF00571 CBS domain BXU04_23880 PF00005 ABC transporter BXU04_23895 PF00005 ABC transporter BXU04_23905 PF01734 Patatin-like phospholipase BXU04_23920 PF05598 Transposase domain (DUF772) BXU04_23920 PF01609 Transposase DDE domain BXU04_23925 PF13683 Integrase core domain BXU04_23925 PF13276 HTH-like domain BXU04_23930 PF01527 Transposase BXU04_23945 PF00248 Aldo/keto reductase family BXU04_23950 PF00107 Zinc-binding dehydrogenase BXU04_23950 PF16884 N-terminal domain of oxidoreductase BXU04_23955 PF00248 Aldo/keto reductase family BXU04_23965 PF00849 RNA pseudouridylate synthase BXU04_23980 PF00270 DEAD/DEAH box helicase BXU04_23980 PF04408 Helicase associated domain (HA2) BXU04_23980 PF00271 Helicase conserved C-terminal domain BXU04_23980 PF08482 ATP-dependent helicase C-terminal BXU04_23985 PF07308 Protein of unknown function (DUF1456) BXU04_23990 PF13378 Enolase C-terminal domain-like BXU04_23990 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BXU04_24000 PF01557 Fumarylacetoacetate (FAA) hydrolase family BXU04_24015 PF00248 Aldo/keto reductase family BXU04_24025 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BXU04_24025 PF04616 Glycosyl hydrolases family 43 BXU04_24050 PF00196 Bacterial regulatory proteins, luxR family BXU04_24050 PF00072 Response regulator receiver domain BXU04_24055 PF00501 AMP-binding enzyme BXU04_24055 PF13193 AMP-binding enzyme C-terminal domain BXU04_24055 PF16177 Acetyl-coenzyme A synthetase N-terminus BXU04_24070 PF04341 Protein of unknown function, DUF485 BXU04_24075 PF00474 Sodium:solute symporter family BXU04_24090 PF03372 Endonuclease/Exonuclease/phosphatase family BXU04_24100 PF04226 Transglycosylase associated protein BXU04_24105 PF01648 4'-phosphopantetheinyl transferase superfamily BXU04_24110 PF09423 PhoD-like phosphatase BXU04_24110 PF16655 PhoD-like phosphatase, N-terminal domain BXU04_24115 PF09423 PhoD-like phosphatase BXU04_24115 PF16655 PhoD-like phosphatase, N-terminal domain BXU04_24120 PF02527 rRNA small subunit methyltransferase G BXU04_24135 PF00830 Ribosomal L28 family BXU04_24140 PF00471 Ribosomal protein L33 BXU04_24145 PF04909 Amidohydrolase BXU04_24155 PF04909 Amidohydrolase BXU04_24165 PF04303 PrpF protein BXU04_24170 PF03737 Aldolase/RraA BXU04_24175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU04_24175 PF03466 LysR substrate binding domain BXU04_24180 PF13396 Phospholipase_D-nuclease N-terminal BXU04_24180 PF13091 PLD-like domain BXU04_24195 PF13361 UvrD-like helicase C-terminal domain BXU04_24195 PF00580 UvrD/REP helicase N-terminal domain BXU04_24210 PF13520 Amino acid permease BXU04_24220 PF02646 RmuC family BXU04_24230 PF00255 Glutathione peroxidase BXU04_24250 PF04055 Radical SAM superfamily BXU04_24260 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BXU04_24275 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BXU04_24275 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BXU04_24285 PF13180 PDZ domain BXU04_24285 PF03572 Peptidase family S41 BXU04_24290 PF01551 Peptidase family M23 BXU04_24300 PF04389 Peptidase family M28 BXU04_24315 PF05598 Transposase domain (DUF772) BXU04_24350 PF02463 RecF/RecN/SMC N terminal domain BXU04_24355 PF01227 GTP cyclohydrolase I BXU04_24380 PF00083 Sugar (and other) transporter BXU04_24475 PF02595 Glycerate kinase family BXU04_24480 PF07690 Major Facilitator Superfamily BXU04_24495 PF10672 S-adenosylmethionine-dependent methyltransferase BXU04_24495 PF17785 PUA-like domain BXU04_24505 PF03741 Integral membrane protein TerC family BXU04_24510 PF01694 Rhomboid family BXU04_24515 PF03009 Glycerophosphoryl diester phosphodiesterase family BXU04_24525 PF01569 PAP2 superfamily BXU04_24530 PF01926 50S ribosome-binding GTPase BXU04_24530 PF12631 MnmE helical domain BXU04_24530 PF10396 GTP-binding protein TrmE N-terminus BXU04_24535 PF01522 Polysaccharide deacetylase BXU04_24540 PF02096 60Kd inner membrane protein BXU04_24540 PF14849 YidC periplasmic domain BXU04_24545 PF00825 Ribonuclease P BXU04_24550 PF00468 Ribosomal protein L34