BRM60_00015 SM00480 DNA polymerase III beta subunit BRM60_00030 SM00387 Histidine kinase-like ATPases BRM60_00030 SM00433 TopoisomeraseII BRM60_00045 SM00028 Tetratricopeptide repeats BRM60_00080 SM00155 Phospholipase D. Active site motifs. BRM60_00235 SM00487 DEAD-like helicases superfamily BRM60_00235 SM00490 helicase superfamily c-terminal domain BRM60_00325 SM01126 BRM60_00325 BRM60_00355 SM00642 Alpha-amylase domain BRM60_00365 SM00642 Alpha-amylase domain BRM60_00375 SM00642 Alpha-amylase domain BRM60_00380 SM00642 Alpha-amylase domain BRM60_00390 SM00267 diguanylate cyclase BRM60_00475 SM00382 ATPases associated with a variety of cellular activities BRM60_00585 SM00369 Leucine-rich repeats, typical (most populated) subfamily BRM60_00610 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRM60_00720 SM00382 ATPases associated with a variety of cellular activities BRM60_00770 SM00487 DEAD-like helicases superfamily BRM60_00770 SM00490 helicase superfamily c-terminal domain BRM60_00850 SM01126 BRM60_00850 BRM60_00885 SM00354 helix_turn _helix lactose operon repressor BRM60_00915 SM00642 Alpha-amylase domain BRM60_00920 SM00642 Alpha-amylase domain BRM60_00925 SM00642 Alpha-amylase domain BRM60_00980 SM00382 ATPases associated with a variety of cellular activities BRM60_00990 SM00938 Nitrogen regulatory protein P-II BRM60_01080 SM01228 BRM60_01080 BRM60_01150 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRM60_01150 SM00388 His Kinase A (phosphoacceptor) domain BRM60_01185 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BRM60_01205 SM00354 helix_turn _helix lactose operon repressor BRM60_01220 SM00563 Phosphate acyltransferases BRM60_01270 SM00344 helix_turn_helix ASNC type BRM60_01320 SM00829 Enoylreductase BRM60_01395 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRM60_01395 SM00091 PAS domain BRM60_01445 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BRM60_01445 SM01232 BRM60_01445 BRM60_01455 SM01126 BRM60_01455 BRM60_01495 SM00382 ATPases associated with a variety of cellular activities BRM60_01510 SM01126 BRM60_01510 BRM60_01570 SM00564 beta-propeller repeat BRM60_01605 SM00091 PAS domain BRM60_01605 SM00387 Histidine kinase-like ATPases BRM60_01605 SM00388 His Kinase A (phosphoacceptor) domain BRM60_01605 SM00448 cheY-homologous receiver domain BRM60_01615 SM00346 helix_turn_helix isocitrate lyase regulation BRM60_01640 SM01126 BRM60_01640 BRM60_01670 SM00563 Phosphate acyltransferases BRM60_01765 SM01126 BRM60_01765 BRM60_01810 SM00382 ATPases associated with a variety of cellular activities BRM60_01835 SM00530 Helix-turn-helix XRE-family like proteins BRM60_01845 SM00382 ATPases associated with a variety of cellular activities BRM60_01865 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BRM60_01915 SM01004 Delta-aminolevulinic acid dehydratase BRM60_01935 SM00477 DNA/RNA non-specific endonuclease BRM60_01935 SM00892 DNA/RNA non-specific endonuclease BRM60_01965 SM00491 BRM60_01965 BRM60_01975 SM01126 BRM60_01975 BRM60_01990 SM01060 BRM60_01990 BRM60_01995 SM00248 ankyrin repeats BRM60_02025 SM00448 cheY-homologous receiver domain BRM60_02025 SM00862 Transcriptional regulatory protein, C terminal BRM60_02030 SM00387 Histidine kinase-like ATPases BRM60_02030 SM00388 His Kinase A (phosphoacceptor) domain BRM60_02125 SM00849 Metallo-beta-lactamase superfamily BRM60_02175 SM01060 BRM60_02175 BRM60_02225 SM00729 Elongator protein 3, MiaB family, Radical SAM BRM60_02225 SM00876 Biotin and Thiamin Synthesis associated domain BRM60_02245 SM00822 BRM60_02245 BRM60_02270 SM00825 Beta-ketoacyl synthase BRM60_02280 SM00248 ankyrin repeats BRM60_02285 SM00226 Low molecular weight phosphatase family BRM60_02315 SM00116 Domain in cystathionine beta-synthase and other proteins. BRM60_02315 SM00924 MgtE intracellular N domain BRM60_02325 SM00881 CoA binding domain BRM60_02395 SM00998 Adenylosuccinate lyase C-terminus BRM60_02420 SM00090 RIO-like kinase BRM60_02445 SM00836 DALR anticodon binding domain BRM60_02445 SM01016 Arginyl tRNA synthetase N terminal dom BRM60_02475 SM01259 BRM60_02475 BRM60_02495 SM00470 ParB-like nuclease domain BRM60_02575 SM00073 Histidine Phosphotransfer domain BRM60_02575 SM00387 Histidine kinase-like ATPases BRM60_02575 SM00388 His Kinase A (phosphoacceptor) domain BRM60_02575 SM00448 cheY-homologous receiver domain BRM60_02580 SM00052 Putative diguanylate phosphodiesterase BRM60_02580 SM00267 diguanylate cyclase BRM60_02580 SM00448 cheY-homologous receiver domain BRM60_02650 SM00563 Phosphate acyltransferases BRM60_02680 SM01209 BRM60_02680 BRM60_02680 SM01210 BRM60_02680 BRM60_02695 SM00798 AICARFT/IMPCHase bienzyme BRM60_02695 SM00851 MGS-like domain BRM60_02725 SM01126 BRM60_02725 BRM60_02750 SM00530 Helix-turn-helix XRE-family like proteins BRM60_02795 SM00878 Biotin carboxylase C-terminal domain BRM60_02835 SM01126 BRM60_02835 BRM60_02865 SM00487 DEAD-like helicases superfamily BRM60_02865 SM00490 helicase superfamily c-terminal domain BRM60_02930 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BRM60_02930 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BRM60_02930 SM00493 BRM60_02930 BRM60_02955 SM00257 Lysin motif BRM60_03190 SM01126 BRM60_03190 BRM60_03205 SM00382 ATPases associated with a variety of cellular activities BRM60_03295 SM00382 ATPases associated with a variety of cellular activities BRM60_03295 SM00448 cheY-homologous receiver domain BRM60_03305 SM00448 cheY-homologous receiver domain BRM60_03325 SM00387 Histidine kinase-like ATPases BRM60_03395 SM00729 Elongator protein 3, MiaB family, Radical SAM BRM60_03400 SM00986 Uracil DNA glycosylase superfamily BRM60_03400 SM00987 UreE urease accessory protein, C-terminal domain BRM60_03410 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. BRM60_03430 SM00382 ATPases associated with a variety of cellular activities BRM60_03465 SM00387 Histidine kinase-like ATPases BRM60_03465 SM00388 His Kinase A (phosphoacceptor) domain BRM60_03470 SM00448 cheY-homologous receiver domain BRM60_03470 SM00862 Transcriptional regulatory protein, C terminal BRM60_03515 SM00344 helix_turn_helix ASNC type BRM60_03525 SM01005 Alanine racemase, C-terminal domain BRM60_03545 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BRM60_03545 SM00091 PAS domain BRM60_03545 SM00387 Histidine kinase-like ATPases BRM60_03545 SM00388 His Kinase A (phosphoacceptor) domain BRM60_03545 SM00448 cheY-homologous receiver domain BRM60_03630 SM00382 ATPases associated with a variety of cellular activities BRM60_03630 SM00930 BRM60_03630 BRM60_03655 SM00986 Uracil DNA glycosylase superfamily BRM60_03655 SM00987 UreE urease accessory protein, C-terminal domain BRM60_03725 SM00382 ATPases associated with a variety of cellular activities BRM60_03735 SM00830 Chorismate mutase type II BRM60_03765 SM01126 BRM60_03765 BRM60_03865 SM00825 Beta-ketoacyl synthase BRM60_03895 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRM60_03920 SM00487 DEAD-like helicases superfamily BRM60_03920 SM00490 helicase superfamily c-terminal domain BRM60_03960 SM00116 Domain in cystathionine beta-synthase and other proteins. BRM60_04025 SM00382 ATPases associated with a variety of cellular activities BRM60_04035 SM00893 Electron transfer flavoprotein domain BRM60_04040 SM00893 Electron transfer flavoprotein domain BRM60_04075 SM00882 Coenzyme A transferase BRM60_04080 SM00882 Coenzyme A transferase BRM60_04115 SM00382 ATPases associated with a variety of cellular activities BRM60_04130 SM00528 Domain in histone-like proteins of HNS family BRM60_04195 SM00656 BRM60_04195 BRM60_04295 SM01211 BRM60_04295 BRM60_04325 SM00382 ATPases associated with a variety of cellular activities BRM60_04395 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRM60_04395 SM00866 BRM60_04395 BRM60_04480 SM00487 DEAD-like helicases superfamily BRM60_04485 SM01126 BRM60_04485 BRM60_04520 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BRM60_04525 SM00822 BRM60_04525 BRM60_04535 SM00825 Beta-ketoacyl synthase BRM60_04570 SM00382 ATPases associated with a variety of cellular activities BRM60_04675 SM00271 DnaJ molecular chaperone homology domain BRM60_04680 SM00448 cheY-homologous receiver domain BRM60_04685 SM00244 prohibitin homologues BRM60_04690 SM00244 prohibitin homologues BRM60_04700 SM00788 Adenylosuccinate synthetase BRM60_04820 SM01329 BRM60_04820 BRM60_04825 SM00917 LeuA allosteric (dimerisation) domain BRM60_04860 SM00862 Transcriptional regulatory protein, C terminal BRM60_04865 SM00342 helix_turn_helix, arabinose operon control protein BRM60_04900 SM01126 BRM60_04900 BRM60_04940 SM00464 Found in ATP-dependent protease La (LON) BRM60_04980 SM00838 Elongation factor G C-terminus BRM60_05105 SM01126 BRM60_05105 BRM60_05180 SM01126 BRM60_05180 BRM60_05185 SM01329 BRM60_05185 BRM60_05250 SM00382 ATPases associated with a variety of cellular activities BRM60_05250 SM00994 ClpX C4-type zinc finger BRM60_05250 SM01086 C-terminal, D2-small domain, of ClpB protein BRM60_05255 SM00382 ATPases associated with a variety of cellular activities BRM60_05255 SM00464 Found in ATP-dependent protease La (LON) BRM60_05260 SM00411 bacterial (prokaryotic) histone like domain BRM60_05285 SM00257 Lysin motif BRM60_05290 SM00849 Metallo-beta-lactamase superfamily BRM60_05305 SM00479 BRM60_05305 BRM60_05315 SM00331 Sigma factor PP2C-like phosphatases BRM60_05315 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BRM60_05380 SM01126 BRM60_05380 BRM60_05405 SM00849 Metallo-beta-lactamase superfamily BRM60_05410 SM00729 Elongator protein 3, MiaB family, Radical SAM BRM60_05445 SM00382 ATPases associated with a variety of cellular activities BRM60_05455 SM00493 BRM60_05455 BRM60_05470 SM00460 Transglutaminase/protease-like homologues BRM60_05480 SM00382 ATPases associated with a variety of cellular activities BRM60_05580 SM00450 Rhodanese Homology Domain BRM60_05615 SM01154 BRM60_05615 BRM60_05625 SM00642 Alpha-amylase domain BRM60_05645 SM00354 helix_turn _helix lactose operon repressor BRM60_05650 SM00822 BRM60_05650 BRM60_05670 SM00448 cheY-homologous receiver domain BRM60_05670 SM00862 Transcriptional regulatory protein, C terminal BRM60_05675 SM00387 Histidine kinase-like ATPases BRM60_05675 SM00388 His Kinase A (phosphoacceptor) domain BRM60_05685 SM00421 helix_turn_helix, Lux Regulon BRM60_05685 SM00448 cheY-homologous receiver domain BRM60_05720 SM00387 Histidine kinase-like ATPases BRM60_05720 SM00388 His Kinase A (phosphoacceptor) domain BRM60_05720 SM00448 cheY-homologous receiver domain BRM60_05740 SM00919 Malic enzyme, NAD binding domain BRM60_05740 SM01274 BRM60_05740 BRM60_05830 SM01011 Aminopeptidase P, N-terminal domain BRM60_05865 SM00729 Elongator protein 3, MiaB family, Radical SAM BRM60_05890 SM00072 Guanylate kinase homologues. BRM60_05905 SM01409 BRM60_05905 BRM60_05910 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRM60_05910 SM00954 Region found in RelA / SpoT proteins BRM60_05920 SM00487 DEAD-like helicases superfamily BRM60_05920 SM00490 helicase superfamily c-terminal domain BRM60_05975 SM00965 Secretin and TonB N terminus short domain BRM60_06015 SM00327 von Willebrand factor (vWF) type A domain BRM60_06020 SM00028 Tetratricopeptide repeats BRM60_06020 SM00327 von Willebrand factor (vWF) type A domain BRM60_06045 SM00861 Transketolase, pyrimidine binding domain BRM60_06105 SM00448 cheY-homologous receiver domain BRM60_06105 SM00862 Transcriptional regulatory protein, C terminal BRM60_06110 SM00387 Histidine kinase-like ATPases BRM60_06110 SM00388 His Kinase A (phosphoacceptor) domain BRM60_06130 SM00382 ATPases associated with a variety of cellular activities BRM60_06145 SM00849 Metallo-beta-lactamase superfamily BRM60_06175 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BRM60_06190 SM01126 BRM60_06190 BRM60_06195 SM00387 Histidine kinase-like ATPases BRM60_06195 SM00388 His Kinase A (phosphoacceptor) domain BRM60_06200 SM00448 cheY-homologous receiver domain BRM60_06200 SM00862 Transcriptional regulatory protein, C terminal BRM60_06455 SM00422 helix_turn_helix, mercury resistance BRM60_06480 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BRM60_06490 SM00849 Metallo-beta-lactamase superfamily BRM60_06515 SM00421 helix_turn_helix, Lux Regulon BRM60_06565 SM00924 MgtE intracellular N domain BRM60_06615 SM00382 ATPases associated with a variety of cellular activities BRM60_06635 SM00116 Domain in cystathionine beta-synthase and other proteins. BRM60_06770 SM00813 Alpha-L-arabinofuranosidase C-terminus BRM60_06790 SM00382 ATPases associated with a variety of cellular activities BRM60_06790 SM00962 SRP54-type protein, GTPase domain BRM60_06790 SM00963 SRP54-type protein, helical bundle domain BRM60_06845 SM00363 S4 RNA-binding domain BRM60_06880 SM00382 ATPases associated with a variety of cellular activities BRM60_06880 SM01086 C-terminal, D2-small domain, of ClpB protein BRM60_06965 SM00855 Phosphoglycerate mutase family BRM60_07055 SM00382 ATPases associated with a variety of cellular activities BRM60_07095 SM00862 Transcriptional regulatory protein, C terminal BRM60_07100 SM00342 helix_turn_helix, arabinose operon control protein BRM60_07140 SM01230 BRM60_07140 BRM60_07180 SM01126 BRM60_07180 BRM60_07220 SM00382 ATPases associated with a variety of cellular activities BRM60_07235 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain BRM60_07275 SM00411 bacterial (prokaryotic) histone like domain BRM60_07305 SM00382 ATPases associated with a variety of cellular activities BRM60_07350 SM00732 Likely ribonuclease with RNase H fold. BRM60_07425 SM00267 diguanylate cyclase BRM60_07440 SM01126 BRM60_07440 BRM60_07585 SM00855 Phosphoglycerate mutase family BRM60_07610 SM00448 cheY-homologous receiver domain BRM60_07615 SM00138 Methyltransferase, chemotaxis proteins BRM60_07620 SM00052 Putative diguanylate phosphodiesterase BRM60_07620 SM00448 cheY-homologous receiver domain BRM60_07625 SM00260 Two component signalling adaptor domain BRM60_07630 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRM60_07630 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRM60_07635 SM00073 Histidine Phosphotransfer domain BRM60_07635 SM00260 Two component signalling adaptor domain BRM60_07635 SM00387 Histidine kinase-like ATPases BRM60_07635 SM01231 BRM60_07635 BRM60_07645 SM00487 DEAD-like helicases superfamily BRM60_07645 SM00490 helicase superfamily c-terminal domain BRM60_07645 SM00982 BRM60_07645 BRM60_07645 SM01058 CarD-like/TRCF domain BRM60_07675 SM00387 Histidine kinase-like ATPases BRM60_07675 SM00388 His Kinase A (phosphoacceptor) domain BRM60_07685 SM00645 Papain family cysteine protease BRM60_07710 SM00645 Papain family cysteine protease BRM60_07730 SM00645 Papain family cysteine protease BRM60_07810 SM00357 Cold shock protein domain BRM60_07925 SM00829 Enoylreductase BRM60_07945 SM00342 helix_turn_helix, arabinose operon control protein BRM60_07945 SM00478 endonuclease III BRM60_07945 SM01009 AlkA N-terminal domain BRM60_07990 SM00487 DEAD-like helicases superfamily BRM60_07990 SM00490 helicase superfamily c-terminal domain BRM60_07995 SM00052 Putative diguanylate phosphodiesterase BRM60_07995 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BRM60_07995 SM00091 PAS domain BRM60_07995 SM00267 diguanylate cyclase BRM60_08000 SM00363 S4 RNA-binding domain BRM60_08040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRM60_08040 SM00387 Histidine kinase-like ATPases BRM60_08040 SM00388 His Kinase A (phosphoacceptor) domain BRM60_08045 SM00448 cheY-homologous receiver domain BRM60_08045 SM00862 Transcriptional regulatory protein, C terminal BRM60_08075 SM00382 ATPases associated with a variety of cellular activities BRM60_08205 SM00382 ATPases associated with a variety of cellular activities BRM60_08205 SM00448 cheY-homologous receiver domain BRM60_08210 SM00387 Histidine kinase-like ATPases BRM60_08210 SM00388 His Kinase A (phosphoacceptor) domain BRM60_08220 SM00881 CoA binding domain BRM60_08395 SM00904 Riboflavin kinase BRM60_08440 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRM60_08520 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BRM60_08520 SM00534 ATPase domain of DNA mismatch repair MUTS family BRM60_08545 SM00382 ATPases associated with a variety of cellular activities BRM60_08575 SM00834 Putative regulatory protein BRM60_08610 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BRM60_08620 SM00382 ATPases associated with a variety of cellular activities BRM60_08745 SM00448 cheY-homologous receiver domain BRM60_08755 SM00341 Helicase and RNase D C-terminal BRM60_08755 SM00487 DEAD-like helicases superfamily BRM60_08755 SM00490 helicase superfamily c-terminal domain BRM60_08755 SM00956 BRM60_08755 BRM60_08770 SM00382 ATPases associated with a variety of cellular activities BRM60_08770 SM00487 DEAD-like helicases superfamily BRM60_08770 SM00490 helicase superfamily c-terminal domain BRM60_08770 SM00847 Helicase associated domain (HA2) Add an annotation BRM60_08825 SM00954 Region found in RelA / SpoT proteins BRM60_08850 SM00491 BRM60_08850 BRM60_08875 SM00448 cheY-homologous receiver domain BRM60_08880 SM00448 cheY-homologous receiver domain BRM60_08885 SM00260 Two component signalling adaptor domain BRM60_08890 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRM60_08895 SM00073 Histidine Phosphotransfer domain BRM60_08895 SM00260 Two component signalling adaptor domain BRM60_08895 SM00387 Histidine kinase-like ATPases BRM60_08895 SM00448 cheY-homologous receiver domain BRM60_08895 SM01231 BRM60_08895 BRM60_08905 SM00260 Two component signalling adaptor domain BRM60_08950 SM00369 Leucine-rich repeats, typical (most populated) subfamily BRM60_09010 SM01149 BRM60_09010 BRM60_09070 SM00382 ATPases associated with a variety of cellular activities BRM60_09075 SM00758 BRM60_09075 BRM60_09075 SM01217 BRM60_09075 BRM60_09095 SM00636 BRM60_09095 BRM60_09100 SM00812 Alpha-L-fucosidase BRM60_09150 SM00244 prohibitin homologues BRM60_09300 SM00867 YceI-like domain BRM60_09310 SM00867 YceI-like domain BRM60_09315 SM00387 Histidine kinase-like ATPases BRM60_09315 SM00388 His Kinase A (phosphoacceptor) domain BRM60_09315 SM00448 cheY-homologous receiver domain BRM60_09320 SM00387 Histidine kinase-like ATPases BRM60_09320 SM00388 His Kinase A (phosphoacceptor) domain BRM60_09320 SM00448 cheY-homologous receiver domain BRM60_09325 SM00387 Histidine kinase-like ATPases BRM60_09325 SM00388 His Kinase A (phosphoacceptor) domain BRM60_09325 SM00448 cheY-homologous receiver domain BRM60_09345 SM00812 Alpha-L-fucosidase BRM60_09370 SM00530 Helix-turn-helix XRE-family like proteins BRM60_09420 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRM60_09425 SM00838 Elongation factor G C-terminus BRM60_09440 SM00358 Double-stranded RNA binding motif BRM60_09440 SM00535 Ribonuclease III family BRM60_09455 SM00448 cheY-homologous receiver domain BRM60_09465 SM01118 BRM60_09465 BRM60_09510 SM00357 Cold shock protein domain BRM60_09530 SM00487 DEAD-like helicases superfamily BRM60_09530 SM00490 helicase superfamily c-terminal domain BRM60_09560 SM00267 diguanylate cyclase BRM60_09580 SM00869 Autotransporter beta-domain BRM60_09585 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BRM60_09980 SM00382 ATPases associated with a variety of cellular activities BRM60_10000 SM00481 DNA polymerase alpha chain like domain BRM60_10040 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRM60_10095 SM00972 Spore Coat Protein U domain BRM60_10110 SM00972 Spore Coat Protein U domain BRM60_10120 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRM60_10150 SM01172 BRM60_10150 BRM60_10155 SM00710 Parallel beta-helix repeats BRM60_10155 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses BRM60_10185 SM00434 DNA Topoisomerase IV BRM60_10195 SM00347 helix_turn_helix multiple antibiotic resistance protein BRM60_10255 SM00861 Transketolase, pyrimidine binding domain BRM60_10260 SM00507 HNH nucleases BRM60_10330 SM00271 DnaJ molecular chaperone homology domain BRM60_10380 SM00382 ATPases associated with a variety of cellular activities BRM60_10405 SM00861 Transketolase, pyrimidine binding domain BRM60_10415 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BRM60_10420 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRM60_10495 SM00382 ATPases associated with a variety of cellular activities BRM60_10500 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRM60_10520 SM00984 UDP binding domain BRM60_10540 SM00354 helix_turn _helix lactose operon repressor BRM60_10560 SM01018 B12 binding domain BRM60_10570 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BRM60_10605 SM00316 Ribosomal protein S1-like RNA-binding domain BRM60_10605 SM00357 Cold shock protein domain BRM60_10605 SM00955 BRM60_10605 BRM60_10620 SM00967 RNA 2'-O ribose methyltransferase substrate binding BRM60_10645 SM01126 BRM60_10645 BRM60_10705 SM01126 BRM60_10705 BRM60_10735 SM01126 BRM60_10735 BRM60_10910 SM01007 Class II Aldolase and Adducin N-terminal domain BRM60_10995 SM00382 ATPases associated with a variety of cellular activities BRM60_11010 SM01126 BRM60_11010 BRM60_11025 SM00363 S4 RNA-binding domain BRM60_11050 SM00354 helix_turn _helix lactose operon repressor BRM60_11130 SM00316 Ribosomal protein S1-like RNA-binding domain BRM60_11135 SM00411 bacterial (prokaryotic) histone like domain BRM60_11155 SM00822 BRM60_11155 BRM60_11185 SM00116 Domain in cystathionine beta-synthase and other proteins. BRM60_11185 SM01240 BRM60_11185 BRM60_11250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRM60_11265 SM00529 Helix-turn-helix diphteria tox regulatory element BRM60_11275 SM00479 BRM60_11275 BRM60_11375 SM00316 Ribosomal protein S1-like RNA-binding domain BRM60_11375 SM00732 Likely ribonuclease with RNase H fold. BRM60_11390 SM00448 cheY-homologous receiver domain BRM60_11395 SM00387 Histidine kinase-like ATPases BRM60_11405 SM00014 Acid phosphatase homologues BRM60_11825 SM01126 BRM60_11825 BRM60_11875 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BRM60_11875 SM00465 GIY-YIG type nucleases (URI domain) BRM60_11885 SM00226 Low molecular weight phosphatase family BRM60_11900 SM00382 ATPases associated with a variety of cellular activities BRM60_11915 SM00849 Metallo-beta-lactamase superfamily BRM60_11920 SM01126 BRM60_11920 BRM60_11935 SM00382 ATPases associated with a variety of cellular activities BRM60_11995 SM00382 ATPases associated with a variety of cellular activities BRM60_12045 SM00448 cheY-homologous receiver domain BRM60_12050 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRM60_12050 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BRM60_12050 SM00091 PAS domain BRM60_12050 SM00387 Histidine kinase-like ATPases BRM60_12050 SM00388 His Kinase A (phosphoacceptor) domain BRM60_12050 SM00448 cheY-homologous receiver domain BRM60_12090 SM00267 diguanylate cyclase BRM60_12135 SM00382 ATPases associated with a variety of cellular activities BRM60_12185 SM00347 helix_turn_helix multiple antibiotic resistance protein BRM60_12215 SM00631 BRM60_12215 BRM60_12220 SM01217 BRM60_12220 BRM60_12235 SM00052 Putative diguanylate phosphodiesterase BRM60_12235 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRM60_12235 SM00267 diguanylate cyclase BRM60_12320 SM00646 BRM60_12320 BRM60_12340 SM00869 Autotransporter beta-domain BRM60_12365 SM00387 Histidine kinase-like ATPases BRM60_12365 SM00388 His Kinase A (phosphoacceptor) domain BRM60_12370 SM00421 helix_turn_helix, Lux Regulon BRM60_12370 SM00448 cheY-homologous receiver domain BRM60_12375 SM00869 Autotransporter beta-domain BRM60_12405 SM00830 Chorismate mutase type II BRM60_12430 SM00240 Forkhead associated domain BRM60_12450 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRM60_12450 SM00866 BRM60_12450 BRM60_12495 SM00434 DNA Topoisomerase IV BRM60_12520 SM00292 breast cancer carboxy-terminal domain BRM60_12520 SM00532 Ligase N family BRM60_12530 SM00771 ZipA, C-terminal domain (FtsZ-binding) BRM60_12535 SM00968 SMC proteins Flexible Hinge Domain BRM60_12590 SM00947 Carbonic anhydrase BRM60_12615 SM00479 BRM60_12615 BRM60_12650 SM00981 BRM60_12650 BRM60_12680 SM00644 BRM60_12680 BRM60_12690 SM00450 Rhodanese Homology Domain BRM60_12715 SM00478 endonuclease III BRM60_12725 SM00947 Carbonic anhydrase BRM60_12785 SM00382 ATPases associated with a variety of cellular activities BRM60_12800 SM00479 BRM60_12800 BRM60_12860 SM01323 BRM60_12860 BRM60_12875 SM00344 helix_turn_helix ASNC type BRM60_12975 SM00387 Histidine kinase-like ATPases BRM60_12990 SM00450 Rhodanese Homology Domain BRM60_13000 SM01126 BRM60_13000 BRM60_13055 SM00852 Probable molybdopterin binding domain BRM60_13060 SM00382 ATPases associated with a variety of cellular activities BRM60_13065 SM00564 beta-propeller repeat BRM60_13080 SM00028 Tetratricopeptide repeats BRM60_13090 SM00562 BRM60_13090 BRM60_13130 SM00382 ATPases associated with a variety of cellular activities BRM60_13155 SM00382 ATPases associated with a variety of cellular activities BRM60_13155 SM00843 BRM60_13155 BRM60_13180 SM00316 Ribosomal protein S1-like RNA-binding domain BRM60_13185 SM00382 ATPases associated with a variety of cellular activities BRM60_13185 SM01086 C-terminal, D2-small domain, of ClpB protein BRM60_13210 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRM60_13225 SM00052 Putative diguanylate phosphodiesterase BRM60_13225 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BRM60_13225 SM00091 PAS domain BRM60_13225 SM00267 diguanylate cyclase BRM60_13230 SM00091 PAS domain BRM60_13230 SM00387 Histidine kinase-like ATPases BRM60_13235 SM00052 Putative diguanylate phosphodiesterase BRM60_13235 SM00267 diguanylate cyclase BRM60_13235 SM00448 cheY-homologous receiver domain BRM60_13240 SM00387 Histidine kinase-like ATPases BRM60_13255 SM00858 BRM60_13255 BRM60_13260 SM00260 Two component signalling adaptor domain BRM60_13260 SM00448 cheY-homologous receiver domain BRM60_13310 SM00047 Lysozyme subfamily 2 BRM60_13350 SM00421 helix_turn_helix, Lux Regulon BRM60_13350 SM00448 cheY-homologous receiver domain BRM60_13360 SM00448 cheY-homologous receiver domain BRM60_13365 SM00382 ATPases associated with a variety of cellular activities BRM60_13385 SM00822 BRM60_13385 BRM60_13390 SM00822 BRM60_13390 BRM60_13445 SM00382 ATPases associated with a variety of cellular activities BRM60_13500 SM00267 diguanylate cyclase BRM60_13505 SM00267 diguanylate cyclase BRM60_13510 SM00052 Putative diguanylate phosphodiesterase BRM60_13510 SM00267 diguanylate cyclase BRM60_13525 SM00382 ATPases associated with a variety of cellular activities BRM60_13525 SM00962 SRP54-type protein, GTPase domain BRM60_13540 SM00448 cheY-homologous receiver domain BRM60_13550 SM00073 Histidine Phosphotransfer domain BRM60_13550 SM00260 Two component signalling adaptor domain BRM60_13550 SM00387 Histidine kinase-like ATPases BRM60_13550 SM01231 BRM60_13550 BRM60_13655 SM01126 BRM60_13655 BRM60_13675 SM00382 ATPases associated with a variety of cellular activities BRM60_13680 SM00382 ATPases associated with a variety of cellular activities BRM60_13715 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BRM60_13725 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BRM60_13745 SM00859 Semialdehyde dehydrogenase, NAD binding domain BRM60_13785 SM00840 BRM60_13785 BRM60_13800 SM00245 tail specific protease BRM60_13810 SM01234 BRM60_13810 BRM60_13915 SM00841 Elongation factor P, C-terminal BRM60_13915 SM01185 BRM60_13915 BRM60_13925 SM00052 Putative diguanylate phosphodiesterase BRM60_13925 SM00267 diguanylate cyclase BRM60_13925 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRM60_13970 SM00382 ATPases associated with a variety of cellular activities BRM60_13975 SM00382 ATPases associated with a variety of cellular activities BRM60_13975 SM00487 DEAD-like helicases superfamily BRM60_13975 SM00490 helicase superfamily c-terminal domain BRM60_14000 SM00357 Cold shock protein domain BRM60_14010 SM01322 BRM60_14010 BRM60_14020 SM00052 Putative diguanylate phosphodiesterase BRM60_14020 SM00267 diguanylate cyclase BRM60_14035 SM00822 BRM60_14035 BRM60_14060 SM00853 MutL C terminal dimerisation domain BRM60_14060 SM01340 BRM60_14060 BRM60_14065 SM00646 BRM60_14065 BRM60_14120 SM00474 3'-5' exonuclease BRM60_14140 SM00528 Domain in histone-like proteins of HNS family BRM60_14200 SM01126 BRM60_14200 BRM60_14285 SM00729 Elongator protein 3, MiaB family, Radical SAM BRM60_14310 SM00116 Domain in cystathionine beta-synthase and other proteins. BRM60_14310 SM01091 Transporter associated domain BRM60_14345 SM00382 ATPases associated with a variety of cellular activities BRM60_14375 SM01230 BRM60_14375 BRM60_14385 SM01230 BRM60_14385 BRM60_14395 SM00267 diguanylate cyclase BRM60_14395 SM00448 cheY-homologous receiver domain BRM60_14450 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BRM60_14450 SM00091 PAS domain BRM60_14450 SM00387 Histidine kinase-like ATPases BRM60_14450 SM00388 His Kinase A (phosphoacceptor) domain BRM60_14450 SM00448 cheY-homologous receiver domain BRM60_14450 SM01079 BRM60_14450 BRM60_14455 SM00448 cheY-homologous receiver domain BRM60_14455 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRM60_14495 SM01126 BRM60_14495 BRM60_14505 SM00354 helix_turn _helix lactose operon repressor BRM60_14770 SM00260 Two component signalling adaptor domain BRM60_14780 SM00448 cheY-homologous receiver domain BRM60_14785 SM00073 Histidine Phosphotransfer domain BRM60_14785 SM00260 Two component signalling adaptor domain BRM60_14785 SM00387 Histidine kinase-like ATPases BRM60_14785 SM01231 BRM60_14785 BRM60_14805 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRM60_14820 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRM60_14825 SM01126 BRM60_14825 BRM60_14830 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRM60_14830 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRM60_14840 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRM60_14840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRM60_14845 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRM60_14845 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRM60_14850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRM60_14850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRM60_14855 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRM60_14855 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRM60_14875 SM00260 Two component signalling adaptor domain BRM60_14900 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRM60_14900 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRM60_14905 SM00138 Methyltransferase, chemotaxis proteins BRM60_14915 SM00448 cheY-homologous receiver domain BRM60_14920 SM00052 Putative diguanylate phosphodiesterase BRM60_14920 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRM60_14920 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BRM60_14920 SM00091 PAS domain BRM60_14920 SM00267 diguanylate cyclase BRM60_14950 SM00966 SpoVT / AbrB like domain BRM60_14975 SM00073 Histidine Phosphotransfer domain BRM60_14975 SM00387 Histidine kinase-like ATPases BRM60_14975 SM00388 His Kinase A (phosphoacceptor) domain BRM60_14975 SM00448 cheY-homologous receiver domain BRM60_14985 SM00448 cheY-homologous receiver domain BRM60_14985 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRM60_15000 SM00850 LytTr DNA-binding domain BRM60_15060 SM00851 MGS-like domain BRM60_15060 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BRM60_15070 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BRM60_15115 SM00899 BRM60_15115 BRM60_15135 SM00822 BRM60_15135 BRM60_15140 SM00841 Elongation factor P, C-terminal BRM60_15140 SM01185 BRM60_15140 BRM60_15180 SM00758 BRM60_15180 BRM60_15200 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BRM60_15225 SM01130 BRM60_15225 BRM60_15245 SM00670 Large family of predicted nucleotide-binding domains BRM60_15345 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BRM60_15360 SM00382 ATPases associated with a variety of cellular activities BRM60_15400 SM00382 ATPases associated with a variety of cellular activities BRM60_15410 SM01103 BRM60_15410 BRM60_15420 SM00257 Lysin motif BRM60_15440 SM00463 Small MutS-related domain BRM60_15470 SM01192 BRM60_15470 BRM60_15470 SM01193 BRM60_15470 BRM60_15495 SM00387 Histidine kinase-like ATPases BRM60_15495 SM00433 TopoisomeraseII BRM60_15530 SM01091 Transporter associated domain BRM60_15575 SM00382 ATPases associated with a variety of cellular activities BRM60_15585 SM00729 Elongator protein 3, MiaB family, Radical SAM BRM60_15855 SM00448 cheY-homologous receiver domain BRM60_15855 SM00862 Transcriptional regulatory protein, C terminal BRM60_15865 SM00387 Histidine kinase-like ATPases BRM60_15900 SM00331 Sigma factor PP2C-like phosphatases BRM60_15900 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BRM60_15925 SM00240 Forkhead associated domain BRM60_15955 SM00382 ATPases associated with a variety of cellular activities BRM60_15955 SM01086 C-terminal, D2-small domain, of ClpB protein BRM60_16105 SM00363 S4 RNA-binding domain BRM60_16110 SM00316 Ribosomal protein S1-like RNA-binding domain BRM60_16125 SM00421 helix_turn_helix, Lux Regulon BRM60_16125 SM00448 cheY-homologous receiver domain BRM60_16130 SM00450 Rhodanese Homology Domain BRM60_16155 SM00984 UDP binding domain BRM60_16210 SM01126 BRM60_16210 BRM60_16220 SM01126 BRM60_16220 BRM60_16265 SM00852 Probable molybdopterin binding domain BRM60_16280 SM01126 BRM60_16280 BRM60_16380 SM00944 Pro-kumamolisin, activation domain BRM60_16445 SM01130 BRM60_16445 BRM60_16470 SM00342 helix_turn_helix, arabinose operon control protein BRM60_16475 SM00382 ATPases associated with a variety of cellular activities BRM60_16475 SM00962 SRP54-type protein, GTPase domain BRM60_16475 SM00963 SRP54-type protein, helical bundle domain BRM60_16490 SM00478 endonuclease III BRM60_16500 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BRM60_16500 SM00091 PAS domain BRM60_16500 SM00387 Histidine kinase-like ATPases BRM60_16500 SM00388 His Kinase A (phosphoacceptor) domain BRM60_16500 SM00448 cheY-homologous receiver domain BRM60_16685 SM00422 helix_turn_helix, mercury resistance BRM60_16690 SM00411 bacterial (prokaryotic) histone like domain BRM60_16695 SM00873 B3/4 domain BRM60_16695 SM00874 tRNA synthetase B5 domain BRM60_16695 SM00896 Ferredoxin-fold anticodon binding domain BRM60_16720 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BRM60_16745 SM00487 DEAD-like helicases superfamily BRM60_16745 SM00490 helicase superfamily c-terminal domain BRM60_16830 SM01001 AIR carboxylase BRM60_16850 SM00316 Ribosomal protein S1-like RNA-binding domain BRM60_16850 SM00322 K homology RNA-binding domain BRM60_16855 SM01387 BRM60_16855 BRM60_16875 SM00316 Ribosomal protein S1-like RNA-binding domain BRM60_16875 SM00322 K homology RNA-binding domain BRM60_16925 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BRM60_16930 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BRM60_16975 SM00822 BRM60_16975 BRM60_17005 SM00052 Putative diguanylate phosphodiesterase BRM60_17005 SM00267 diguanylate cyclase BRM60_17005 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRM60_17075 SM00859 Semialdehyde dehydrogenase, NAD binding domain BRM60_17110 SM00257 Lysin motif BRM60_17150 SM00729 Elongator protein 3, MiaB family, Radical SAM BRM60_17200 SM01160 BRM60_17200 BRM60_17215 SM01126 BRM60_17215 BRM60_17265 SM00098 Alkaline phosphatase homologues BRM60_17270 SM00977 TilS substrate C-terminal domain BRM60_17330 SM00316 Ribosomal protein S1-like RNA-binding domain BRM60_17430 SM01126 BRM60_17430 BRM60_17485 SM01126 BRM60_17485 BRM60_17495 SM00642 Alpha-amylase domain BRM60_17540 SM00528 Domain in histone-like proteins of HNS family BRM60_17585 SM00869 Autotransporter beta-domain BRM60_17670 SM00967 RNA 2'-O ribose methyltransferase substrate binding BRM60_17690 SM01126 BRM60_17690 BRM60_17760 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRM60_17760 SM00387 Histidine kinase-like ATPases BRM60_17805 SM00506 Appr-1"-p processing enzyme BRM60_17860 SM01060 BRM60_17860 BRM60_17905 SM00091 PAS domain BRM60_17905 SM00342 helix_turn_helix, arabinose operon control protein BRM60_17975 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRM60_17985 SM00481 DNA polymerase alpha chain like domain BRM60_18010 SM00966 SpoVT / AbrB like domain BRM60_18035 SM00855 Phosphoglycerate mutase family BRM60_18060 SM00220 Serine/Threonine protein kinases, catalytic domain BRM60_18070 SM00487 DEAD-like helicases superfamily BRM60_18115 SM00487 DEAD-like helicases superfamily BRM60_18115 SM00490 helicase superfamily c-terminal domain BRM60_18225 SM00382 ATPases associated with a variety of cellular activities BRM60_18225 SM01086 C-terminal, D2-small domain, of ClpB protein BRM60_18555 SM00478 endonuclease III BRM60_18570 SM00421 helix_turn_helix, Lux Regulon BRM60_18570 SM00448 cheY-homologous receiver domain BRM60_18610 SM00387 Histidine kinase-like ATPases BRM60_18610 SM00388 His Kinase A (phosphoacceptor) domain BRM60_18615 SM00448 cheY-homologous receiver domain BRM60_18615 SM00862 Transcriptional regulatory protein, C terminal BRM60_18650 SM00382 ATPases associated with a variety of cellular activities BRM60_18685 SM00990 BRM60_18685 BRM60_18730 SM00662 RNA polymerases D BRM60_18735 SM00363 S4 RNA-binding domain BRM60_18735 SM01390 BRM60_18735 BRM60_18795 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BRM60_18800 SM01374 BRM60_18800 BRM60_18820 SM00322 K homology RNA-binding domain BRM60_18835 SM01382 BRM60_18835 BRM60_18835 SM01383 BRM60_18835 BRM60_18855 SM01403 BRM60_18855 BRM60_18870 SM00838 Elongation factor G C-terminus BRM60_18870 SM00889 Elongation factor G, domain IV BRM60_18885 SM00663 RNA polymerase I subunit A N-terminus BRM60_18910 SM00649 Ribosomal protein L11/L12 BRM60_18920 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BRM60_18920 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BRM60_18970 SM01400 BRM60_18970 BRM60_18990 SM00028 Tetratricopeptide repeats BRM60_19000 SM00937 BRM60_19000 BRM60_19005 SM00028 Tetratricopeptide repeats BRM60_19010 SM00852 Probable molybdopterin binding domain BRM60_19130 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BRM60_19130 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BRM60_19145 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BRM60_19145 SM00475 5'-3' exonuclease BRM60_19235 SM01126 BRM60_19235 BRM60_19305 SM00448 cheY-homologous receiver domain BRM60_19305 SM00862 Transcriptional regulatory protein, C terminal BRM60_19310 SM00387 Histidine kinase-like ATPases BRM60_19310 SM00388 His Kinase A (phosphoacceptor) domain BRM60_19330 SM00014 Acid phosphatase homologues BRM60_19385 SM00855 Phosphoglycerate mutase family BRM60_19420 SM00829 Enoylreductase BRM60_19430 SM00382 ATPases associated with a variety of cellular activities BRM60_19480 SM00829 Enoylreductase BRM60_19530 SM00387 Histidine kinase-like ATPases BRM60_19530 SM00448 cheY-homologous receiver domain BRM60_19535 SM00448 cheY-homologous receiver domain BRM60_19635 SM00347 helix_turn_helix multiple antibiotic resistance protein BRM60_19680 SM01126 BRM60_19680 BRM60_19740 SM00650 Ribosomal RNA adenine dimethylases BRM60_19805 SM00387 Histidine kinase-like ATPases BRM60_19805 SM00388 His Kinase A (phosphoacceptor) domain BRM60_19810 SM00448 cheY-homologous receiver domain BRM60_19810 SM00862 Transcriptional regulatory protein, C terminal BRM60_19820 SM00382 ATPases associated with a variety of cellular activities BRM60_19840 SM00382 ATPases associated with a variety of cellular activities BRM60_19985 SM00996 S-adenosyl-L-homocysteine hydrolase BRM60_19985 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BRM60_20045 SM00829 Enoylreductase BRM60_20090 SM00957 SecA DEAD-like domain BRM60_20090 SM00958 SecA preprotein cross-linking domain BRM60_20110 SM00864 Tubulin/FtsZ family, GTPase domain BRM60_20110 SM00865 Tubulin/FtsZ family, C-terminal domain BRM60_20115 SM00842 Cell division protein FtsA BRM60_20220 SM00448 cheY-homologous receiver domain BRM60_20220 SM00862 Transcriptional regulatory protein, C terminal BRM60_20225 SM00387 Histidine kinase-like ATPases BRM60_20225 SM00388 His Kinase A (phosphoacceptor) domain BRM60_20335 SM00382 ATPases associated with a variety of cellular activities BRM60_20365 SM00829 Enoylreductase BRM60_20380 SM00448 cheY-homologous receiver domain BRM60_20380 SM00862 Transcriptional regulatory protein, C terminal BRM60_20385 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRM60_20385 SM00387 Histidine kinase-like ATPases BRM60_20385 SM00388 His Kinase A (phosphoacceptor) domain BRM60_20420 SM00387 Histidine kinase-like ATPases BRM60_20420 SM00388 His Kinase A (phosphoacceptor) domain BRM60_20540 SM01126 BRM60_20540 BRM60_20625 SM00354 helix_turn _helix lactose operon repressor BRM60_20635 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRM60_20635 SM00866 BRM60_20635 BRM60_20695 SM00387 Histidine kinase-like ATPases BRM60_20695 SM00388 His Kinase A (phosphoacceptor) domain BRM60_20695 SM00448 cheY-homologous receiver domain BRM60_20700 SM00448 cheY-homologous receiver domain BRM60_20705 SM00387 Histidine kinase-like ATPases BRM60_20705 SM00388 His Kinase A (phosphoacceptor) domain BRM60_20710 SM00749 bacterial OsmY and nodulation domain BRM60_20720 SM01350 BRM60_20720 BRM60_20775 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRM60_20775 SM00245 tail specific protease BRM60_20790 SM00729 Elongator protein 3, MiaB family, Radical SAM BRM60_20815 SM00936 Penicillin-binding protein 5, C-terminal domain BRM60_20855 SM00257 Lysin motif BRM60_20895 SM00268 Actin BRM60_20945 SM00267 diguanylate cyclase BRM60_20950 SM01263 BRM60_20950 BRM60_20965 SM00382 ATPases associated with a variety of cellular activities BRM60_20965 SM01086 C-terminal, D2-small domain, of ClpB protein BRM60_21055 SM00448 cheY-homologous receiver domain BRM60_21055 SM00850 LytTr DNA-binding domain BRM60_21110 SM00637 BRM60_21110 BRM60_21125 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRM60_21125 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BRM60_21125 SM00091 PAS domain BRM60_21125 SM00267 diguanylate cyclase BRM60_21135 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRM60_21205 SM00060 Fibronectin type 3 domain BRM60_21300 SM00046 Diacylglycerol kinase catalytic domain (presumed) BRM60_21315 SM00271 DnaJ molecular chaperone homology domain BRM60_21405 SM00347 helix_turn_helix multiple antibiotic resistance protein BRM60_21440 SM01126 BRM60_21440 BRM60_21560 SM00644 BRM60_21560 BRM60_21570 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BRM60_21590 SM01126 BRM60_21590 BRM60_21665 SM01126 BRM60_21665 BRM60_21685 SM01217 BRM60_21685 BRM60_21690 SM00905 Dihydroneopterin aldolase BRM60_21725 SM00400 zinc finger BRM60_21725 SM00493 BRM60_21725 BRM60_21725 SM00766 DNA primase DnaG DnaB-binding BRM60_21825 SM01126 BRM60_21825 BRM60_21880 SM00100 Cyclic nucleotide-monophosphate binding domain BRM60_21880 SM00419 helix_turn_helix, cAMP Regulatory protein BRM60_21900 SM00903 Flavin reductase like domain BRM60_22060 SM01150 BRM60_22060 BRM60_22075 SM01126 BRM60_22075 BRM60_22090 SM00450 Rhodanese Homology Domain BRM60_22115 SM00387 Histidine kinase-like ATPases BRM60_22115 SM00388 His Kinase A (phosphoacceptor) domain BRM60_22120 SM00382 ATPases associated with a variety of cellular activities BRM60_22120 SM00448 cheY-homologous receiver domain BRM60_22205 SM00347 helix_turn_helix multiple antibiotic resistance protein BRM60_22215 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRM60_22310 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BRM60_22310 SM00474 3'-5' exonuclease BRM60_22310 SM00475 5'-3' exonuclease BRM60_22310 SM00482 DNA polymerase A domain BRM60_22375 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRM60_22375 SM00331 Sigma factor PP2C-like phosphatases BRM60_22395 SM00867 YceI-like domain BRM60_22465 SM01126 BRM60_22465 BRM60_22515 SM00883 Chaperonin 10 Kd subunit BRM60_22550 SM00986 Uracil DNA glycosylase superfamily BRM60_22550 SM00987 UreE urease accessory protein, C-terminal domain BRM60_22555 SM00448 cheY-homologous receiver domain BRM60_22565 SM00382 ATPases associated with a variety of cellular activities BRM60_22570 SM00487 DEAD-like helicases superfamily BRM60_22570 SM00490 helicase superfamily c-terminal domain BRM60_22580 SM00357 Cold shock protein domain BRM60_22580 SM00382 ATPases associated with a variety of cellular activities BRM60_22580 SM00959 Rho termination factor, N-terminal domain BRM60_22640 SM00563 Phosphate acyltransferases BRM60_22775 SM00448 cheY-homologous receiver domain BRM60_22775 SM00862 Transcriptional regulatory protein, C terminal BRM60_22870 SM01126 BRM60_22870 BRM60_22965 SM00878 Biotin carboxylase C-terminal domain BRM60_23030 SM00833 Cobalamin synthesis protein cobW C-terminal domain BRM60_23075 SM00836 DALR anticodon binding domain BRM60_23085 SM00382 ATPases associated with a variety of cellular activities BRM60_23190 SM00354 helix_turn _helix lactose operon repressor BRM60_23205 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BRM60_23215 SM00758 BRM60_23215 BRM60_23215 SM01217 BRM60_23215 BRM60_23245 SM00633 Glycosyl hydrolase family 10 BRM60_23300 SM01126 BRM60_23300 BRM60_23315 SM00052 Putative diguanylate phosphodiesterase BRM60_23365 SM00347 helix_turn_helix multiple antibiotic resistance protein BRM60_23405 SM00530 Helix-turn-helix XRE-family like proteins BRM60_23475 SM00530 Helix-turn-helix XRE-family like proteins BRM60_23525 SM01126 BRM60_23525 BRM60_23545 SM00382 ATPases associated with a variety of cellular activities BRM60_23545 SM00448 cheY-homologous receiver domain BRM60_23550 SM00387 Histidine kinase-like ATPases BRM60_23550 SM00388 His Kinase A (phosphoacceptor) domain BRM60_23560 SM00938 Nitrogen regulatory protein P-II BRM60_23565 SM01230 BRM60_23565 BRM60_23590 SM00028 Tetratricopeptide repeats BRM60_23605 SM00563 Phosphate acyltransferases BRM60_23615 SM00155 Phospholipase D. Active site motifs. BRM60_23620 SM00867 YceI-like domain BRM60_23625 SM00855 Phosphoglycerate mutase family BRM60_23650 SM00530 Helix-turn-helix XRE-family like proteins BRM60_23680 SM00382 ATPases associated with a variety of cellular activities BRM60_23695 SM00382 ATPases associated with a variety of cellular activities BRM60_23750 SM00829 Enoylreductase BRM60_23780 SM00487 DEAD-like helicases superfamily BRM60_23780 SM00490 helicase superfamily c-terminal domain BRM60_23780 SM00847 Helicase associated domain (HA2) Add an annotation BRM60_23790 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BRM60_23850 SM00421 helix_turn_helix, Lux Regulon BRM60_23850 SM00448 cheY-homologous receiver domain BRM60_23980 SM00155 Phospholipase D. Active site motifs. BRM60_24010 SM01126 BRM60_24010 BRM60_24055 SM00729 Elongator protein 3, MiaB family, Radical SAM BRM60_24090 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRM60_24090 SM00245 tail specific protease BRM60_24165 SM00347 helix_turn_helix multiple antibiotic resistance protein BRM60_24335 SM00014 Acid phosphatase homologues BRM60_24345 SM00028 Tetratricopeptide repeats