BCR61_00010	SM00382	ATPases associated with a variety of cellular activities
BCR61_00010	SM00760	Bacterial dnaA protein helix-turn-helix domain
BCR61_00015	SM00480	DNA polymerase III beta subunit
BCR61_00025	SM00387	Histidine kinase-like ATPases
BCR61_00025	SM00433	TopoisomeraseII
BCR61_00040	SM00028	Tetratricopeptide repeats
BCR61_00075	SM00155	Phospholipase D. Active site motifs.
BCR61_00295	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BCR61_00320	SM00369	Leucine-rich repeats, typical (most populated) subfamily
BCR61_00430	SM00382	ATPases associated with a variety of cellular activities
BCR61_00520	SM00267	diguanylate cyclase
BCR61_00530	SM00642	Alpha-amylase domain
BCR61_00535	SM00642	Alpha-amylase domain
BCR61_00545	SM00642	Alpha-amylase domain
BCR61_00555	SM00642	Alpha-amylase domain
BCR61_00585	SM01126	BCR61_00585
BCR61_00655	SM00487	DEAD-like helicases superfamily
BCR61_00655	SM00490	helicase superfamily c-terminal domain
BCR61_00690	SM01126	BCR61_00690
BCR61_00715	SM00382	ATPases associated with a variety of cellular activities
BCR61_00745	SM00382	ATPases associated with a variety of cellular activities
BCR61_00770	SM01126	BCR61_00770
BCR61_00795	SM00487	DEAD-like helicases superfamily
BCR61_00795	SM00490	helicase superfamily c-terminal domain
BCR61_00885	SM01126	BCR61_00885
BCR61_00925	SM00354	helix_turn _helix lactose operon repressor
BCR61_00955	SM00642	Alpha-amylase domain
BCR61_00960	SM00642	Alpha-amylase domain
BCR61_00965	SM00642	Alpha-amylase domain
BCR61_00985	SM01126	BCR61_00985
BCR61_01020	SM00382	ATPases associated with a variety of cellular activities
BCR61_01030	SM00938	Nitrogen regulatory protein P-II
BCR61_01125	SM01228	BCR61_01125
BCR61_01195	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BCR61_01195	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_01235	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
BCR61_01255	SM00354	helix_turn _helix lactose operon repressor
BCR61_01270	SM00563	Phosphate acyltransferases
BCR61_01330	SM00344	helix_turn_helix ASNC type
BCR61_01375	SM00829	Enoylreductase
BCR61_01440	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BCR61_01440	SM00091	PAS domain
BCR61_01495	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
BCR61_01495	SM01232	BCR61_01495
BCR61_01505	SM01126	BCR61_01505
BCR61_01555	SM00382	ATPases associated with a variety of cellular activities
BCR61_01570	SM01126	BCR61_01570
BCR61_01655	SM00564	beta-propeller repeat
BCR61_01705	SM00091	PAS domain
BCR61_01705	SM00387	Histidine kinase-like ATPases
BCR61_01705	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_01705	SM00448	cheY-homologous receiver domain
BCR61_01725	SM00346	helix_turn_helix isocitrate lyase regulation
BCR61_01750	SM01126	BCR61_01750
BCR61_01780	SM00563	Phosphate acyltransferases
BCR61_01885	SM01126	BCR61_01885
BCR61_01930	SM00382	ATPases associated with a variety of cellular activities
BCR61_01955	SM00530	Helix-turn-helix XRE-family like proteins 
BCR61_01965	SM00382	ATPases associated with a variety of cellular activities
BCR61_01985	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
BCR61_02030	SM01004	Delta-aminolevulinic acid dehydratase
BCR61_02055	SM00477	DNA/RNA non-specific endonuclease
BCR61_02055	SM00892	DNA/RNA non-specific endonuclease
BCR61_02085	SM00491	BCR61_02085
BCR61_02095	SM01126	BCR61_02095
BCR61_02115	SM01060	BCR61_02115
BCR61_02120	SM00248	ankyrin repeats
BCR61_02150	SM00448	cheY-homologous receiver domain
BCR61_02150	SM00862	Transcriptional regulatory protein, C terminal
BCR61_02155	SM00387	Histidine kinase-like ATPases
BCR61_02155	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_02255	SM00849	Metallo-beta-lactamase superfamily
BCR61_02305	SM01060	BCR61_02305
BCR61_02355	SM00729	Elongator protein 3, MiaB family, Radical SAM
BCR61_02355	SM00876	Biotin and Thiamin Synthesis associated domain
BCR61_02375	SM00822	BCR61_02375
BCR61_02400	SM00825	Beta-ketoacyl synthase
BCR61_02410	SM00248	ankyrin repeats
BCR61_02440	SM00116	Domain in cystathionine beta-synthase and other proteins.
BCR61_02440	SM00924	MgtE intracellular N domain
BCR61_02450	SM00881	CoA binding domain
BCR61_02530	SM00998	Adenylosuccinate lyase C-terminus
BCR61_02550	SM00346	helix_turn_helix isocitrate lyase regulation
BCR61_02555	SM00090	RIO-like kinase
BCR61_02580	SM00836	DALR anticodon binding domain
BCR61_02580	SM01016	Arginyl tRNA synthetase N terminal dom
BCR61_02610	SM01259	BCR61_02610
BCR61_02630	SM00470	ParB-like nuclease domain
BCR61_02715	SM00073	Histidine Phosphotransfer domain
BCR61_02715	SM00387	Histidine kinase-like ATPases
BCR61_02715	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_02715	SM00448	cheY-homologous receiver domain
BCR61_02720	SM00052	Putative diguanylate phosphodiesterase
BCR61_02720	SM00267	diguanylate cyclase
BCR61_02720	SM00448	cheY-homologous receiver domain
BCR61_02780	SM00563	Phosphate acyltransferases
BCR61_02820	SM01209	BCR61_02820
BCR61_02820	SM01210	BCR61_02820
BCR61_02825	SM00798	AICARFT/IMPCHase bienzyme
BCR61_02825	SM00851	MGS-like domain
BCR61_02860	SM01126	BCR61_02860
BCR61_02885	SM00530	Helix-turn-helix XRE-family like proteins 
BCR61_02925	SM00878	Biotin carboxylase C-terminal domain
BCR61_02960	SM01126	BCR61_02960
BCR61_02985	SM00487	DEAD-like helicases superfamily
BCR61_02985	SM00490	helicase superfamily c-terminal domain
BCR61_03045	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BCR61_03045	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BCR61_03045	SM00493	BCR61_03045
BCR61_03070	SM00257	Lysin motif
BCR61_03235	SM01126	BCR61_03235
BCR61_03250	SM00382	ATPases associated with a variety of cellular activities
BCR61_03340	SM00382	ATPases associated with a variety of cellular activities
BCR61_03340	SM00448	cheY-homologous receiver domain
BCR61_03350	SM00448	cheY-homologous receiver domain
BCR61_03405	SM00387	Histidine kinase-like ATPases
BCR61_03410	SM00448	cheY-homologous receiver domain
BCR61_03410	SM00850	LytTr DNA-binding domain
BCR61_03475	SM00729	Elongator protein 3, MiaB family, Radical SAM
BCR61_03480	SM00986	Uracil DNA glycosylase superfamily
BCR61_03480	SM00987	UreE urease accessory protein, C-terminal domain 
BCR61_03490	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
BCR61_03510	SM00382	ATPases associated with a variety of cellular activities
BCR61_03540	SM00387	Histidine kinase-like ATPases
BCR61_03540	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_03545	SM00448	cheY-homologous receiver domain
BCR61_03545	SM00862	Transcriptional regulatory protein, C terminal
BCR61_03590	SM00344	helix_turn_helix ASNC type
BCR61_03600	SM01005	Alanine racemase, C-terminal domain
BCR61_03620	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BCR61_03620	SM00091	PAS domain
BCR61_03620	SM00387	Histidine kinase-like ATPases
BCR61_03620	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_03620	SM00448	cheY-homologous receiver domain
BCR61_03700	SM00382	ATPases associated with a variety of cellular activities
BCR61_03700	SM00930	BCR61_03700
BCR61_03725	SM00986	Uracil DNA glycosylase superfamily
BCR61_03725	SM00987	UreE urease accessory protein, C-terminal domain 
BCR61_03795	SM00382	ATPases associated with a variety of cellular activities
BCR61_03805	SM00830	Chorismate mutase type II
BCR61_03835	SM01126	BCR61_03835
BCR61_03930	SM00825	Beta-ketoacyl synthase
BCR61_03960	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BCR61_03985	SM00487	DEAD-like helicases superfamily
BCR61_03985	SM00490	helicase superfamily c-terminal domain
BCR61_04025	SM00116	Domain in cystathionine beta-synthase and other proteins.
BCR61_04085	SM00382	ATPases associated with a variety of cellular activities
BCR61_04095	SM00893	Electron transfer flavoprotein domain
BCR61_04100	SM00893	Electron transfer flavoprotein domain
BCR61_04135	SM00882	Coenzyme A transferase
BCR61_04140	SM00882	Coenzyme A transferase
BCR61_04175	SM00382	ATPases associated with a variety of cellular activities
BCR61_04190	SM00528	Domain in histone-like proteins of HNS family
BCR61_04375	SM01211	BCR61_04375
BCR61_04405	SM00382	ATPases associated with a variety of cellular activities
BCR61_04475	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BCR61_04475	SM00866	BCR61_04475
BCR61_04555	SM00487	DEAD-like helicases superfamily
BCR61_04605	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BCR61_04610	SM00822	BCR61_04610
BCR61_04620	SM00825	Beta-ketoacyl synthase
BCR61_04665	SM00382	ATPases associated with a variety of cellular activities
BCR61_04765	SM00271	DnaJ molecular chaperone homology domain
BCR61_04770	SM00448	cheY-homologous receiver domain
BCR61_04775	SM00244	prohibitin homologues
BCR61_04780	SM00244	prohibitin homologues
BCR61_04790	SM00788	Adenylosuccinate synthetase
BCR61_04890	SM01126	BCR61_04890
BCR61_04920	SM01329	BCR61_04920
BCR61_04925	SM00917	LeuA allosteric (dimerisation) domain
BCR61_04960	SM00862	Transcriptional regulatory protein, C terminal
BCR61_04965	SM00342	helix_turn_helix, arabinose operon control protein
BCR61_05000	SM01126	BCR61_05000
BCR61_05010	SM01126	BCR61_05010
BCR61_05040	SM00464	Found in ATP-dependent protease La (LON)
BCR61_05110	SM01126	BCR61_05110
BCR61_05150	SM01126	BCR61_05150
BCR61_05235	SM00838	Elongation factor G C-terminus
BCR61_05375	SM01126	BCR61_05375
BCR61_05450	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BCR61_05450	SM00475	5'-3' exonuclease
BCR61_05465	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
BCR61_05465	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
BCR61_05590	SM00852	Probable molybdopterin binding domain
BCR61_05595	SM00028	Tetratricopeptide repeats
BCR61_05600	SM00937	BCR61_05600
BCR61_05610	SM00028	Tetratricopeptide repeats
BCR61_05630	SM01400	BCR61_05630
BCR61_05680	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
BCR61_05680	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BCR61_05690	SM00649	Ribosomal protein L11/L12
BCR61_05715	SM00663	RNA polymerase I subunit A N-terminus
BCR61_05730	SM00838	Elongation factor G C-terminus
BCR61_05730	SM00889	Elongation factor G, domain IV
BCR61_05745	SM01403	BCR61_05745
BCR61_05765	SM01382	BCR61_05765
BCR61_05765	SM01383	BCR61_05765
BCR61_05780	SM00322	K homology RNA-binding domain
BCR61_05800	SM01374	BCR61_05800
BCR61_05805	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BCR61_05865	SM00363	S4 RNA-binding domain
BCR61_05865	SM01390	BCR61_05865
BCR61_05870	SM00662	RNA polymerases D
BCR61_05920	SM00990	BCR61_05920
BCR61_05955	SM00382	ATPases associated with a variety of cellular activities
BCR61_05990	SM00448	cheY-homologous receiver domain
BCR61_05990	SM00862	Transcriptional regulatory protein, C terminal
BCR61_05995	SM00387	Histidine kinase-like ATPases
BCR61_05995	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_06035	SM00421	helix_turn_helix, Lux Regulon
BCR61_06035	SM00448	cheY-homologous receiver domain
BCR61_06050	SM00478	endonuclease III
BCR61_06325	SM00382	ATPases associated with a variety of cellular activities
BCR61_06325	SM01086	C-terminal, D2-small domain, of ClpB protein
BCR61_06370	SM01126	BCR61_06370
BCR61_06395	SM00729	Elongator protein 3, MiaB family, Radical SAM
BCR61_06430	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BCR61_06430	SM00245	tail specific protease
BCR61_06535	SM00487	DEAD-like helicases superfamily
BCR61_06535	SM00490	helicase superfamily c-terminal domain
BCR61_06580	SM00487	DEAD-like helicases superfamily
BCR61_06590	SM00220	Serine/Threonine protein kinases, catalytic domain
BCR61_06615	SM00855	Phosphoglycerate mutase family
BCR61_06640	SM00966	SpoVT / AbrB like domain 
BCR61_06665	SM00481	DNA polymerase alpha chain like domain
BCR61_06675	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BCR61_06735	SM00091	PAS domain
BCR61_06735	SM00342	helix_turn_helix, arabinose operon control protein
BCR61_06765	SM01060	BCR61_06765
BCR61_06825	SM00506	Appr-1"-p processing enzyme
BCR61_06875	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BCR61_06875	SM00387	Histidine kinase-like ATPases
BCR61_06950	SM01126	BCR61_06950
BCR61_06970	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BCR61_06980	SM01126	BCR61_06980
BCR61_07040	SM00869	Autotransporter beta-domain
BCR61_07090	SM00528	Domain in histone-like proteins of HNS family
BCR61_07110	SM01126	BCR61_07110
BCR61_07115	SM00642	Alpha-amylase domain
BCR61_07165	SM01126	BCR61_07165
BCR61_07275	SM00316	Ribosomal protein S1-like RNA-binding domain
BCR61_07350	SM00977	TilS substrate C-terminal domain
BCR61_07355	SM00098	Alkaline phosphatase homologues
BCR61_07405	SM01126	BCR61_07405
BCR61_07420	SM01160	BCR61_07420
BCR61_07465	SM00729	Elongator protein 3, MiaB family, Radical SAM
BCR61_07500	SM00257	Lysin motif
BCR61_07535	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BCR61_07615	SM00052	Putative diguanylate phosphodiesterase
BCR61_07615	SM00267	diguanylate cyclase
BCR61_07615	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCR61_07645	SM00822	BCR61_07645
BCR61_07690	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
BCR61_07695	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BCR61_07745	SM00316	Ribosomal protein S1-like RNA-binding domain
BCR61_07745	SM00322	K homology RNA-binding domain
BCR61_07765	SM01387	BCR61_07765
BCR61_07770	SM00316	Ribosomal protein S1-like RNA-binding domain
BCR61_07770	SM00322	K homology RNA-binding domain
BCR61_07790	SM01001	AIR carboxylase
BCR61_07875	SM00487	DEAD-like helicases superfamily
BCR61_07875	SM00490	helicase superfamily c-terminal domain
BCR61_07920	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BCR61_07945	SM00873	B3/4 domain
BCR61_07945	SM00874	tRNA synthetase B5 domain
BCR61_07945	SM00896	Ferredoxin-fold anticodon binding domain
BCR61_07950	SM00411	bacterial (prokaryotic) histone like domain
BCR61_07955	SM00422	helix_turn_helix, mercury resistance
BCR61_08145	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BCR61_08145	SM00091	PAS domain
BCR61_08145	SM00387	Histidine kinase-like ATPases
BCR61_08145	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_08145	SM00448	cheY-homologous receiver domain
BCR61_08155	SM00478	endonuclease III
BCR61_08170	SM00382	ATPases associated with a variety of cellular activities
BCR61_08170	SM00962	SRP54-type protein, GTPase domain
BCR61_08170	SM00963	SRP54-type protein, helical bundle domain
BCR61_08175	SM00342	helix_turn_helix, arabinose operon control protein
BCR61_08200	SM01130	BCR61_08200
BCR61_08265	SM00944	Pro-kumamolisin, activation domain
BCR61_08345	SM01126	BCR61_08345
BCR61_08360	SM00852	Probable molybdopterin binding domain
BCR61_08405	SM01126	BCR61_08405
BCR61_08415	SM01126	BCR61_08415
BCR61_08475	SM00984	UDP binding domain
BCR61_08495	SM00450	Rhodanese Homology Domain
BCR61_08500	SM00421	helix_turn_helix, Lux Regulon
BCR61_08500	SM00448	cheY-homologous receiver domain
BCR61_08520	SM00316	Ribosomal protein S1-like RNA-binding domain
BCR61_08525	SM00363	S4 RNA-binding domain
BCR61_08675	SM00382	ATPases associated with a variety of cellular activities
BCR61_08675	SM01086	C-terminal, D2-small domain, of ClpB protein
BCR61_08705	SM00240	Forkhead associated domain
BCR61_08730	SM00331	Sigma factor PP2C-like phosphatases
BCR61_08730	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BCR61_08760	SM00387	Histidine kinase-like ATPases
BCR61_08770	SM00448	cheY-homologous receiver domain
BCR61_08770	SM00862	Transcriptional regulatory protein, C terminal
BCR61_09030	SM00729	Elongator protein 3, MiaB family, Radical SAM
BCR61_09040	SM00382	ATPases associated with a variety of cellular activities
BCR61_09080	SM01091	Transporter associated domain
BCR61_09120	SM00387	Histidine kinase-like ATPases
BCR61_09120	SM00433	TopoisomeraseII
BCR61_09145	SM01192	BCR61_09145
BCR61_09145	SM01193	BCR61_09145
BCR61_09175	SM00463	Small MutS-related domain
BCR61_09195	SM00257	Lysin motif
BCR61_09205	SM01103	BCR61_09205
BCR61_09215	SM00382	ATPases associated with a variety of cellular activities
BCR61_09255	SM00382	ATPases associated with a variety of cellular activities
BCR61_09265	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BCR61_09365	SM00670	Large family of predicted nucleotide-binding domains
BCR61_09395	SM01130	BCR61_09395
BCR61_09420	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BCR61_09440	SM00758	BCR61_09440
BCR61_09480	SM00841	Elongation factor P, C-terminal
BCR61_09480	SM01185	BCR61_09480
BCR61_09485	SM00822	BCR61_09485
BCR61_09505	SM00899	BCR61_09505
BCR61_09555	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
BCR61_09565	SM00851	MGS-like domain
BCR61_09565	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BCR61_09630	SM00850	LytTr DNA-binding domain
BCR61_09645	SM00448	cheY-homologous receiver domain
BCR61_09645	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BCR61_09655	SM00073	Histidine Phosphotransfer domain
BCR61_09655	SM00387	Histidine kinase-like ATPases
BCR61_09655	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_09655	SM00448	cheY-homologous receiver domain
BCR61_09680	SM00966	SpoVT / AbrB like domain 
BCR61_09705	SM00052	Putative diguanylate phosphodiesterase
BCR61_09705	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BCR61_09705	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BCR61_09705	SM00091	PAS domain
BCR61_09705	SM00267	diguanylate cyclase
BCR61_09710	SM00448	cheY-homologous receiver domain
BCR61_09720	SM00138	Methyltransferase, chemotaxis proteins 
BCR61_09725	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BCR61_09725	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCR61_09765	SM00260	Two component signalling adaptor domain
BCR61_09785	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BCR61_09785	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCR61_09790	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BCR61_09790	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCR61_09800	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BCR61_09800	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCR61_09810	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BCR61_09810	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCR61_09815	SM01126	BCR61_09815
BCR61_09820	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BCR61_09845	SM00073	Histidine Phosphotransfer domain
BCR61_09845	SM00260	Two component signalling adaptor domain
BCR61_09845	SM00387	Histidine kinase-like ATPases
BCR61_09845	SM01231	BCR61_09845
BCR61_09850	SM00448	cheY-homologous receiver domain
BCR61_09860	SM00260	Two component signalling adaptor domain
BCR61_09970	SM01126	BCR61_09970
BCR61_10155	SM00354	helix_turn _helix lactose operon repressor
BCR61_10175	SM01126	BCR61_10175
BCR61_10215	SM00448	cheY-homologous receiver domain
BCR61_10215	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BCR61_10220	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BCR61_10220	SM00091	PAS domain
BCR61_10220	SM00387	Histidine kinase-like ATPases
BCR61_10220	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_10220	SM00448	cheY-homologous receiver domain
BCR61_10220	SM01079	BCR61_10220
BCR61_10275	SM00267	diguanylate cyclase
BCR61_10275	SM00448	cheY-homologous receiver domain
BCR61_10285	SM01230	BCR61_10285
BCR61_10295	SM01230	BCR61_10295
BCR61_10320	SM00382	ATPases associated with a variety of cellular activities
BCR61_10365	SM00116	Domain in cystathionine beta-synthase and other proteins.
BCR61_10365	SM01091	Transporter associated domain
BCR61_10390	SM00729	Elongator protein 3, MiaB family, Radical SAM
BCR61_10465	SM01126	BCR61_10465
BCR61_10515	SM00528	Domain in histone-like proteins of HNS family
BCR61_10535	SM00474	3'-5' exonuclease
BCR61_10595	SM00646	BCR61_10595
BCR61_10600	SM00853	MutL C terminal dimerisation domain
BCR61_10600	SM01340	BCR61_10600
BCR61_10625	SM00822	BCR61_10625
BCR61_10640	SM00052	Putative diguanylate phosphodiesterase
BCR61_10640	SM00267	diguanylate cyclase
BCR61_10650	SM01322	BCR61_10650
BCR61_10660	SM00357	Cold shock protein domain
BCR61_10685	SM00382	ATPases associated with a variety of cellular activities
BCR61_10685	SM00487	DEAD-like helicases superfamily
BCR61_10685	SM00490	helicase superfamily c-terminal domain
BCR61_10690	SM00382	ATPases associated with a variety of cellular activities
BCR61_10735	SM00052	Putative diguanylate phosphodiesterase
BCR61_10735	SM00267	diguanylate cyclase
BCR61_10735	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCR61_10745	SM00841	Elongation factor P, C-terminal
BCR61_10745	SM01185	BCR61_10745
BCR61_10820	SM01234	BCR61_10820
BCR61_10830	SM00245	tail specific protease
BCR61_10845	SM00840	BCR61_10845
BCR61_10885	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BCR61_10905	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
BCR61_10915	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
BCR61_10960	SM00382	ATPases associated with a variety of cellular activities
BCR61_10965	SM00382	ATPases associated with a variety of cellular activities
BCR61_10985	SM01126	BCR61_10985
BCR61_11180	SM00073	Histidine Phosphotransfer domain
BCR61_11180	SM00260	Two component signalling adaptor domain
BCR61_11180	SM00387	Histidine kinase-like ATPases
BCR61_11180	SM01231	BCR61_11180
BCR61_11190	SM00448	cheY-homologous receiver domain
BCR61_11205	SM00382	ATPases associated with a variety of cellular activities
BCR61_11205	SM00962	SRP54-type protein, GTPase domain
BCR61_11225	SM00052	Putative diguanylate phosphodiesterase
BCR61_11225	SM00267	diguanylate cyclase
BCR61_11230	SM00267	diguanylate cyclase
BCR61_11235	SM00267	diguanylate cyclase
BCR61_11290	SM00382	ATPases associated with a variety of cellular activities
BCR61_11350	SM00822	BCR61_11350
BCR61_11355	SM00822	BCR61_11355
BCR61_11375	SM00382	ATPases associated with a variety of cellular activities
BCR61_11380	SM00448	cheY-homologous receiver domain
BCR61_11390	SM00421	helix_turn_helix, Lux Regulon
BCR61_11390	SM00448	cheY-homologous receiver domain
BCR61_11430	SM00047	Lysozyme subfamily 2
BCR61_11475	SM00260	Two component signalling adaptor domain
BCR61_11475	SM00448	cheY-homologous receiver domain
BCR61_11480	SM00858	BCR61_11480
BCR61_11495	SM00387	Histidine kinase-like ATPases
BCR61_11500	SM00052	Putative diguanylate phosphodiesterase
BCR61_11500	SM00267	diguanylate cyclase
BCR61_11500	SM00448	cheY-homologous receiver domain
BCR61_11505	SM00091	PAS domain
BCR61_11505	SM00387	Histidine kinase-like ATPases
BCR61_11510	SM00052	Putative diguanylate phosphodiesterase
BCR61_11510	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BCR61_11510	SM00091	PAS domain
BCR61_11510	SM00267	diguanylate cyclase
BCR61_11525	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BCR61_11550	SM00382	ATPases associated with a variety of cellular activities
BCR61_11550	SM01086	C-terminal, D2-small domain, of ClpB protein
BCR61_11555	SM00316	Ribosomal protein S1-like RNA-binding domain
BCR61_11585	SM00382	ATPases associated with a variety of cellular activities
BCR61_11585	SM00843	BCR61_11585
BCR61_11610	SM00382	ATPases associated with a variety of cellular activities
BCR61_11650	SM00562	BCR61_11650
BCR61_11660	SM00028	Tetratricopeptide repeats
BCR61_11675	SM00564	beta-propeller repeat
BCR61_11680	SM00382	ATPases associated with a variety of cellular activities
BCR61_11685	SM00852	Probable molybdopterin binding domain
BCR61_11755	SM01126	BCR61_11755
BCR61_11765	SM00450	Rhodanese Homology Domain
BCR61_11815	SM00387	Histidine kinase-like ATPases
BCR61_11950	SM00344	helix_turn_helix ASNC type
BCR61_11965	SM01323	BCR61_11965
BCR61_12015	SM00479	BCR61_12015
BCR61_12030	SM00382	ATPases associated with a variety of cellular activities
BCR61_12080	SM00947	Carbonic anhydrase
BCR61_12090	SM00478	endonuclease III
BCR61_12115	SM00450	Rhodanese Homology Domain
BCR61_12125	SM00644	BCR61_12125
BCR61_12155	SM00981	BCR61_12155
BCR61_12190	SM00479	BCR61_12190
BCR61_12215	SM00947	Carbonic anhydrase
BCR61_12265	SM00968	SMC proteins Flexible Hinge Domain
BCR61_12270	SM00771	ZipA, C-terminal domain (FtsZ-binding)
BCR61_12280	SM00292	breast cancer carboxy-terminal domain
BCR61_12280	SM00532	Ligase N family
BCR61_12315	SM00434	DNA Topoisomerase IV
BCR61_12370	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BCR61_12370	SM00866	BCR61_12370
BCR61_12390	SM00240	Forkhead associated domain
BCR61_12415	SM00830	Chorismate mutase type II
BCR61_12445	SM00869	Autotransporter beta-domain
BCR61_12450	SM00421	helix_turn_helix, Lux Regulon
BCR61_12450	SM00448	cheY-homologous receiver domain
BCR61_12455	SM00387	Histidine kinase-like ATPases
BCR61_12455	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_12480	SM00869	Autotransporter beta-domain
BCR61_12510	SM00646	BCR61_12510
BCR61_12590	SM00052	Putative diguanylate phosphodiesterase
BCR61_12590	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BCR61_12590	SM00267	diguanylate cyclase
BCR61_12605	SM01217	BCR61_12605
BCR61_12610	SM00631	BCR61_12610
BCR61_12640	SM00347	helix_turn_helix multiple antibiotic resistance protein
BCR61_12685	SM00382	ATPases associated with a variety of cellular activities
BCR61_12745	SM00267	diguanylate cyclase
BCR61_12785	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BCR61_12785	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BCR61_12785	SM00091	PAS domain
BCR61_12785	SM00387	Histidine kinase-like ATPases
BCR61_12785	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_12785	SM00448	cheY-homologous receiver domain
BCR61_12790	SM00448	cheY-homologous receiver domain
BCR61_12850	SM00382	ATPases associated with a variety of cellular activities
BCR61_12910	SM00382	ATPases associated with a variety of cellular activities
BCR61_12925	SM01126	BCR61_12925
BCR61_12930	SM00849	Metallo-beta-lactamase superfamily
BCR61_12945	SM00382	ATPases associated with a variety of cellular activities
BCR61_12960	SM00226	Low molecular weight phosphatase family
BCR61_12970	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BCR61_12970	SM00465	GIY-YIG type nucleases (URI domain)
BCR61_13015	SM01126	BCR61_13015
BCR61_13500	SM00014	Acid phosphatase homologues
BCR61_13510	SM00387	Histidine kinase-like ATPases
BCR61_13515	SM00448	cheY-homologous receiver domain
BCR61_13530	SM00316	Ribosomal protein S1-like RNA-binding domain
BCR61_13530	SM00732	Likely ribonuclease with RNase H fold.
BCR61_13600	SM00479	BCR61_13600
BCR61_13610	SM00529	Helix-turn-helix diphteria tox regulatory element
BCR61_13690	SM00116	Domain in cystathionine beta-synthase and other proteins.
BCR61_13690	SM01240	BCR61_13690
BCR61_13720	SM00822	BCR61_13720
BCR61_13740	SM00411	bacterial (prokaryotic) histone like domain
BCR61_13745	SM00316	Ribosomal protein S1-like RNA-binding domain
BCR61_13850	SM00363	S4 RNA-binding domain
BCR61_13865	SM01126	BCR61_13865
BCR61_13880	SM00382	ATPases associated with a variety of cellular activities
BCR61_13965	SM01007	Class II Aldolase and Adducin N-terminal domain
BCR61_14140	SM01126	BCR61_14140
BCR61_14170	SM01126	BCR61_14170
BCR61_14205	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BCR61_14230	SM00316	Ribosomal protein S1-like RNA-binding domain
BCR61_14230	SM00357	Cold shock protein domain
BCR61_14230	SM00955	BCR61_14230
BCR61_14265	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BCR61_14275	SM01018	B12 binding domain
BCR61_14300	SM00354	helix_turn _helix lactose operon repressor
BCR61_14320	SM00984	UDP binding domain
BCR61_14340	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BCR61_14345	SM00382	ATPases associated with a variety of cellular activities
BCR61_14405	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BCR61_14410	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
BCR61_14420	SM00861	Transketolase, pyrimidine binding domain
BCR61_14445	SM00382	ATPases associated with a variety of cellular activities
BCR61_14490	SM00271	DnaJ molecular chaperone homology domain
BCR61_14560	SM00507	HNH nucleases
BCR61_14565	SM00861	Transketolase, pyrimidine binding domain
BCR61_14585	SM01126	BCR61_14585
BCR61_14645	SM00347	helix_turn_helix multiple antibiotic resistance protein
BCR61_14650	SM00342	helix_turn_helix, arabinose operon control protein
BCR61_14655	SM00434	DNA Topoisomerase IV
BCR61_14690	SM00710	Parallel beta-helix repeats
BCR61_14690	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
BCR61_14695	SM01172	BCR61_14695
BCR61_14730	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BCR61_14740	SM00972	Spore Coat Protein U domain
BCR61_14755	SM00972	Spore Coat Protein U domain
BCR61_14810	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BCR61_14850	SM00481	DNA polymerase alpha chain like domain
BCR61_14870	SM00382	ATPases associated with a variety of cellular activities
BCR61_15250	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BCR61_15255	SM00869	Autotransporter beta-domain
BCR61_15280	SM00267	diguanylate cyclase
BCR61_15310	SM00487	DEAD-like helicases superfamily
BCR61_15310	SM00490	helicase superfamily c-terminal domain
BCR61_15330	SM00357	Cold shock protein domain
BCR61_15405	SM01118	BCR61_15405
BCR61_15415	SM00448	cheY-homologous receiver domain
BCR61_15430	SM00358	Double-stranded RNA binding motif
BCR61_15430	SM00535	Ribonuclease III family
BCR61_15445	SM00838	Elongation factor G C-terminus
BCR61_15450	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BCR61_15500	SM00530	Helix-turn-helix XRE-family like proteins 
BCR61_15530	SM00812	Alpha-L-fucosidase
BCR61_15560	SM00387	Histidine kinase-like ATPases
BCR61_15560	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_15560	SM00448	cheY-homologous receiver domain
BCR61_15565	SM00387	Histidine kinase-like ATPases
BCR61_15565	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_15565	SM00448	cheY-homologous receiver domain
BCR61_15570	SM00387	Histidine kinase-like ATPases
BCR61_15570	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_15570	SM00448	cheY-homologous receiver domain
BCR61_15575	SM00867	YceI-like domain 
BCR61_15585	SM00867	YceI-like domain 
BCR61_15650	SM00116	Domain in cystathionine beta-synthase and other proteins.
BCR61_15740	SM00244	prohibitin homologues
BCR61_15790	SM00812	Alpha-L-fucosidase
BCR61_15795	SM00636	BCR61_15795
BCR61_15815	SM00758	BCR61_15815
BCR61_15815	SM01217	BCR61_15815
BCR61_15820	SM00382	ATPases associated with a variety of cellular activities
BCR61_15845	SM01149	BCR61_15845
BCR61_15895	SM00369	Leucine-rich repeats, typical (most populated) subfamily
BCR61_15950	SM00260	Two component signalling adaptor domain
BCR61_15960	SM00073	Histidine Phosphotransfer domain
BCR61_15960	SM00260	Two component signalling adaptor domain
BCR61_15960	SM00387	Histidine kinase-like ATPases
BCR61_15960	SM00448	cheY-homologous receiver domain
BCR61_15960	SM01231	BCR61_15960
BCR61_15965	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BCR61_15970	SM00260	Two component signalling adaptor domain
BCR61_15975	SM00448	cheY-homologous receiver domain
BCR61_15980	SM00448	cheY-homologous receiver domain
BCR61_16005	SM00491	BCR61_16005
BCR61_16030	SM00954	Region found in RelA / SpoT proteins
BCR61_16095	SM00382	ATPases associated with a variety of cellular activities
BCR61_16095	SM00487	DEAD-like helicases superfamily
BCR61_16095	SM00490	helicase superfamily c-terminal domain
BCR61_16095	SM00847	Helicase associated domain (HA2)  Add an annotation
BCR61_16105	SM00341	Helicase and RNase D C-terminal
BCR61_16105	SM00487	DEAD-like helicases superfamily
BCR61_16105	SM00490	helicase superfamily c-terminal domain
BCR61_16105	SM00956	BCR61_16105
BCR61_16115	SM00448	cheY-homologous receiver domain
BCR61_16235	SM00382	ATPases associated with a variety of cellular activities
BCR61_16245	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BCR61_16280	SM00834	Putative regulatory protein
BCR61_16325	SM00382	ATPases associated with a variety of cellular activities
BCR61_16445	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BCR61_16490	SM00904	Riboflavin kinase
BCR61_16660	SM00881	CoA binding domain
BCR61_16670	SM00387	Histidine kinase-like ATPases
BCR61_16670	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_16675	SM00382	ATPases associated with a variety of cellular activities
BCR61_16675	SM00448	cheY-homologous receiver domain
BCR61_16790	SM00382	ATPases associated with a variety of cellular activities
BCR61_16820	SM00448	cheY-homologous receiver domain
BCR61_16820	SM00862	Transcriptional regulatory protein, C terminal
BCR61_16825	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCR61_16825	SM00387	Histidine kinase-like ATPases
BCR61_16825	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_16860	SM00363	S4 RNA-binding domain
BCR61_16865	SM00052	Putative diguanylate phosphodiesterase
BCR61_16865	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BCR61_16865	SM00091	PAS domain
BCR61_16865	SM00267	diguanylate cyclase
BCR61_16870	SM00487	DEAD-like helicases superfamily
BCR61_16870	SM00490	helicase superfamily c-terminal domain
BCR61_16920	SM00342	helix_turn_helix, arabinose operon control protein
BCR61_16920	SM00478	endonuclease III
BCR61_16920	SM01009	AlkA N-terminal domain
BCR61_16940	SM00829	Enoylreductase
BCR61_17060	SM00357	Cold shock protein domain
BCR61_17130	SM00645	Papain family cysteine protease
BCR61_17150	SM00645	Papain family cysteine protease
BCR61_17170	SM00645	Papain family cysteine protease
BCR61_17180	SM00387	Histidine kinase-like ATPases
BCR61_17180	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_17215	SM00487	DEAD-like helicases superfamily
BCR61_17215	SM00490	helicase superfamily c-terminal domain
BCR61_17215	SM00982	BCR61_17215
BCR61_17215	SM01058	CarD-like/TRCF domain
BCR61_17225	SM00073	Histidine Phosphotransfer domain
BCR61_17225	SM00260	Two component signalling adaptor domain
BCR61_17225	SM00387	Histidine kinase-like ATPases
BCR61_17225	SM01231	BCR61_17225
BCR61_17235	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BCR61_17235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCR61_17240	SM00260	Two component signalling adaptor domain
BCR61_17245	SM00052	Putative diguanylate phosphodiesterase
BCR61_17245	SM00448	cheY-homologous receiver domain
BCR61_17250	SM00138	Methyltransferase, chemotaxis proteins 
BCR61_17255	SM00448	cheY-homologous receiver domain
BCR61_17260	SM00155	Phospholipase D. Active site motifs.
BCR61_17290	SM00855	Phosphoglycerate mutase family
BCR61_17330	SM01126	BCR61_17330
BCR61_17410	SM01126	BCR61_17410
BCR61_17435	SM00267	diguanylate cyclase
BCR61_17515	SM00732	Likely ribonuclease with RNase H fold.
BCR61_17555	SM00382	ATPases associated with a variety of cellular activities
BCR61_17580	SM00411	bacterial (prokaryotic) histone like domain
BCR61_17620	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
BCR61_17635	SM00382	ATPases associated with a variety of cellular activities
BCR61_17715	SM01230	BCR61_17715
BCR61_17755	SM00342	helix_turn_helix, arabinose operon control protein
BCR61_17760	SM00862	Transcriptional regulatory protein, C terminal
BCR61_17805	SM00382	ATPases associated with a variety of cellular activities
BCR61_17905	SM00855	Phosphoglycerate mutase family
BCR61_17995	SM00382	ATPases associated with a variety of cellular activities
BCR61_17995	SM01086	C-terminal, D2-small domain, of ClpB protein
BCR61_18040	SM00363	S4 RNA-binding domain
BCR61_18095	SM00382	ATPases associated with a variety of cellular activities
BCR61_18095	SM00962	SRP54-type protein, GTPase domain
BCR61_18095	SM00963	SRP54-type protein, helical bundle domain
BCR61_18120	SM00813	Alpha-L-arabinofuranosidase C-terminus
BCR61_18265	SM00116	Domain in cystathionine beta-synthase and other proteins.
BCR61_18285	SM00382	ATPases associated with a variety of cellular activities
BCR61_18335	SM00924	MgtE intracellular N domain
BCR61_18380	SM00421	helix_turn_helix, Lux Regulon
BCR61_18405	SM00849	Metallo-beta-lactamase superfamily
BCR61_18415	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
BCR61_18440	SM00422	helix_turn_helix, mercury resistance
BCR61_18730	SM00448	cheY-homologous receiver domain
BCR61_18730	SM00862	Transcriptional regulatory protein, C terminal
BCR61_18735	SM00387	Histidine kinase-like ATPases
BCR61_18735	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_18740	SM01126	BCR61_18740
BCR61_18760	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BCR61_18795	SM00849	Metallo-beta-lactamase superfamily
BCR61_18810	SM00382	ATPases associated with a variety of cellular activities
BCR61_18830	SM00387	Histidine kinase-like ATPases
BCR61_18830	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_18835	SM00448	cheY-homologous receiver domain
BCR61_18835	SM00862	Transcriptional regulatory protein, C terminal
BCR61_18895	SM00861	Transketolase, pyrimidine binding domain
BCR61_18920	SM00028	Tetratricopeptide repeats
BCR61_18920	SM00327	von Willebrand factor (vWF) type A domain
BCR61_18925	SM00327	von Willebrand factor (vWF) type A domain
BCR61_18940	SM00382	ATPases associated with a variety of cellular activities
BCR61_18960	SM00965	Secretin and TonB N terminus short domain
BCR61_19010	SM00487	DEAD-like helicases superfamily
BCR61_19010	SM00490	helicase superfamily c-terminal domain
BCR61_19020	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BCR61_19020	SM00954	Region found in RelA / SpoT proteins
BCR61_19025	SM01409	BCR61_19025
BCR61_19045	SM00072	Guanylate kinase homologues.
BCR61_19070	SM00729	Elongator protein 3, MiaB family, Radical SAM
BCR61_19100	SM01011	Aminopeptidase P, N-terminal domain
BCR61_19230	SM00919	Malic enzyme, NAD binding domain
BCR61_19230	SM01274	BCR61_19230
BCR61_19250	SM00387	Histidine kinase-like ATPases
BCR61_19250	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_19250	SM00448	cheY-homologous receiver domain
BCR61_19280	SM00421	helix_turn_helix, Lux Regulon
BCR61_19280	SM00448	cheY-homologous receiver domain
BCR61_19290	SM00387	Histidine kinase-like ATPases
BCR61_19290	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_19295	SM00448	cheY-homologous receiver domain
BCR61_19295	SM00862	Transcriptional regulatory protein, C terminal
BCR61_19310	SM00822	BCR61_19310
BCR61_19315	SM00354	helix_turn _helix lactose operon repressor
BCR61_19335	SM00642	Alpha-amylase domain
BCR61_19345	SM01154	BCR61_19345
BCR61_19380	SM00450	Rhodanese Homology Domain
BCR61_19485	SM00382	ATPases associated with a variety of cellular activities
BCR61_19495	SM00460	Transglutaminase/protease-like homologues
BCR61_19510	SM00493	BCR61_19510
BCR61_19520	SM00382	ATPases associated with a variety of cellular activities
BCR61_19555	SM00729	Elongator protein 3, MiaB family, Radical SAM
BCR61_19560	SM00849	Metallo-beta-lactamase superfamily
BCR61_19585	SM01126	BCR61_19585
BCR61_19635	SM00331	Sigma factor PP2C-like phosphatases
BCR61_19635	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BCR61_19645	SM00479	BCR61_19645
BCR61_19660	SM00849	Metallo-beta-lactamase superfamily
BCR61_19665	SM00257	Lysin motif
BCR61_19690	SM00411	bacterial (prokaryotic) histone like domain
BCR61_19695	SM00382	ATPases associated with a variety of cellular activities
BCR61_19695	SM00464	Found in ATP-dependent protease La (LON)
BCR61_19700	SM00382	ATPases associated with a variety of cellular activities
BCR61_19700	SM00994	ClpX C4-type zinc finger
BCR61_19700	SM01086	C-terminal, D2-small domain, of ClpB protein
BCR61_19775	SM01329	BCR61_19775
BCR61_19780	SM01126	BCR61_19780
BCR61_19810	SM00448	cheY-homologous receiver domain
BCR61_19810	SM00862	Transcriptional regulatory protein, C terminal
BCR61_19815	SM00387	Histidine kinase-like ATPases
BCR61_19815	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_19835	SM00014	Acid phosphatase homologues
BCR61_19890	SM00855	Phosphoglycerate mutase family
BCR61_19915	SM00829	Enoylreductase
BCR61_19925	SM00382	ATPases associated with a variety of cellular activities
BCR61_19975	SM00829	Enoylreductase
BCR61_20035	SM00387	Histidine kinase-like ATPases
BCR61_20035	SM00448	cheY-homologous receiver domain
BCR61_20040	SM00448	cheY-homologous receiver domain
BCR61_20095	SM01126	BCR61_20095
BCR61_20145	SM00347	helix_turn_helix multiple antibiotic resistance protein
BCR61_20190	SM01126	BCR61_20190
BCR61_20250	SM00650	Ribosomal RNA adenine dimethylases
BCR61_20325	SM00387	Histidine kinase-like ATPases
BCR61_20325	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_20330	SM00448	cheY-homologous receiver domain
BCR61_20330	SM00862	Transcriptional regulatory protein, C terminal
BCR61_20340	SM00382	ATPases associated with a variety of cellular activities
BCR61_20515	SM00996	S-adenosyl-L-homocysteine hydrolase
BCR61_20515	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
BCR61_20575	SM00829	Enoylreductase
BCR61_20615	SM00957	SecA DEAD-like domain
BCR61_20615	SM00958	SecA preprotein cross-linking domain
BCR61_20635	SM00864	Tubulin/FtsZ family, GTPase domain
BCR61_20635	SM00865	Tubulin/FtsZ family, C-terminal domain
BCR61_20640	SM00842	Cell division protein FtsA
BCR61_20745	SM00448	cheY-homologous receiver domain
BCR61_20745	SM00862	Transcriptional regulatory protein, C terminal
BCR61_20750	SM00387	Histidine kinase-like ATPases
BCR61_20750	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_20860	SM00382	ATPases associated with a variety of cellular activities
BCR61_20890	SM00829	Enoylreductase
BCR61_20910	SM00448	cheY-homologous receiver domain
BCR61_20910	SM00862	Transcriptional regulatory protein, C terminal
BCR61_20915	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCR61_20915	SM00387	Histidine kinase-like ATPases
BCR61_20915	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_20960	SM00387	Histidine kinase-like ATPases
BCR61_20960	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_21025	SM01126	BCR61_21025
BCR61_21110	SM01126	BCR61_21110
BCR61_21155	SM00354	helix_turn _helix lactose operon repressor
BCR61_21165	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BCR61_21165	SM00866	BCR61_21165
BCR61_21235	SM00387	Histidine kinase-like ATPases
BCR61_21235	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_21235	SM00448	cheY-homologous receiver domain
BCR61_21240	SM00448	cheY-homologous receiver domain
BCR61_21245	SM00387	Histidine kinase-like ATPases
BCR61_21245	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_21250	SM00749	bacterial OsmY and nodulation domain
BCR61_21260	SM01350	BCR61_21260
BCR61_21305	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BCR61_21305	SM00245	tail specific protease
BCR61_21310	SM00729	Elongator protein 3, MiaB family, Radical SAM
BCR61_21330	SM00936	Penicillin-binding protein 5, C-terminal domain 
BCR61_21430	SM00268	Actin
BCR61_21490	SM00267	diguanylate cyclase
BCR61_21495	SM01263	BCR61_21495
BCR61_21510	SM00382	ATPases associated with a variety of cellular activities
BCR61_21510	SM01086	C-terminal, D2-small domain, of ClpB protein
BCR61_21625	SM00448	cheY-homologous receiver domain
BCR61_21625	SM00850	LytTr DNA-binding domain
BCR61_21685	SM00637	BCR61_21685
BCR61_21700	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BCR61_21700	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BCR61_21700	SM00091	PAS domain
BCR61_21700	SM00267	diguanylate cyclase
BCR61_21710	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BCR61_21785	SM00060	Fibronectin type 3 domain
BCR61_21885	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BCR61_21900	SM00271	DnaJ molecular chaperone homology domain
BCR61_22000	SM00347	helix_turn_helix multiple antibiotic resistance protein
BCR61_22035	SM01126	BCR61_22035
BCR61_22145	SM00644	BCR61_22145
BCR61_22155	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BCR61_22175	SM01126	BCR61_22175
BCR61_22250	SM01126	BCR61_22250
BCR61_22270	SM01217	BCR61_22270
BCR61_22275	SM00905	Dihydroneopterin aldolase
BCR61_22305	SM00400	zinc finger
BCR61_22305	SM00493	BCR61_22305
BCR61_22305	SM00766	DNA primase DnaG DnaB-binding
BCR61_22405	SM01126	BCR61_22405
BCR61_22460	SM00100	Cyclic nucleotide-monophosphate binding domain
BCR61_22460	SM00419	helix_turn_helix, cAMP Regulatory protein
BCR61_22480	SM00903	Flavin reductase like domain
BCR61_22620	SM01150	BCR61_22620
BCR61_22635	SM01126	BCR61_22635
BCR61_22645	SM01126	BCR61_22645
BCR61_22665	SM00450	Rhodanese Homology Domain
BCR61_22695	SM00387	Histidine kinase-like ATPases
BCR61_22695	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_22700	SM00382	ATPases associated with a variety of cellular activities
BCR61_22700	SM00448	cheY-homologous receiver domain
BCR61_22790	SM00347	helix_turn_helix multiple antibiotic resistance protein
BCR61_22795	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BCR61_22810	SM01126	BCR61_22810
BCR61_22890	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BCR61_22890	SM00474	3'-5' exonuclease
BCR61_22890	SM00475	5'-3' exonuclease
BCR61_22890	SM00482	DNA polymerase A domain
BCR61_22925	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BCR61_22980	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BCR61_22980	SM00331	Sigma factor PP2C-like phosphatases
BCR61_23000	SM00867	YceI-like domain 
BCR61_23075	SM01126	BCR61_23075
BCR61_23120	SM00883	Chaperonin 10 Kd subunit
BCR61_23155	SM00986	Uracil DNA glycosylase superfamily
BCR61_23155	SM00987	UreE urease accessory protein, C-terminal domain 
BCR61_23160	SM00448	cheY-homologous receiver domain
BCR61_23170	SM00382	ATPases associated with a variety of cellular activities
BCR61_23175	SM00487	DEAD-like helicases superfamily
BCR61_23175	SM00490	helicase superfamily c-terminal domain
BCR61_23185	SM00357	Cold shock protein domain
BCR61_23185	SM00382	ATPases associated with a variety of cellular activities
BCR61_23185	SM00959	Rho termination factor, N-terminal domain
BCR61_23255	SM00563	Phosphate acyltransferases
BCR61_23385	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_23390	SM00387	Histidine kinase-like ATPases
BCR61_23395	SM00448	cheY-homologous receiver domain
BCR61_23395	SM00862	Transcriptional regulatory protein, C terminal
BCR61_23490	SM01126	BCR61_23490
BCR61_23595	SM00878	Biotin carboxylase C-terminal domain
BCR61_23660	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BCR61_23685	SM00382	ATPases associated with a variety of cellular activities
BCR61_23705	SM00836	DALR anticodon binding domain
BCR61_23715	SM00382	ATPases associated with a variety of cellular activities
BCR61_23815	SM00354	helix_turn _helix lactose operon repressor
BCR61_23830	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BCR61_23840	SM00758	BCR61_23840
BCR61_23840	SM01217	BCR61_23840
BCR61_23870	SM00633	Glycosyl hydrolase family 10
BCR61_23945	SM00052	Putative diguanylate phosphodiesterase
BCR61_23990	SM00347	helix_turn_helix multiple antibiotic resistance protein
BCR61_24020	SM00530	Helix-turn-helix XRE-family like proteins 
BCR61_24075	SM00530	Helix-turn-helix XRE-family like proteins 
BCR61_24105	SM00237	Domains in Na-Ca exchangers and integrin-beta4
BCR61_24105	SM00736	Dystroglycan-type cadherin-like domains.
BCR61_24105	SM00869	Autotransporter beta-domain
BCR61_24125	SM01126	BCR61_24125
BCR61_24145	SM00382	ATPases associated with a variety of cellular activities
BCR61_24145	SM00448	cheY-homologous receiver domain
BCR61_24150	SM00387	Histidine kinase-like ATPases
BCR61_24150	SM00388	His Kinase A (phosphoacceptor) domain
BCR61_24160	SM00938	Nitrogen regulatory protein P-II
BCR61_24165	SM01230	BCR61_24165
BCR61_24190	SM00028	Tetratricopeptide repeats
BCR61_24205	SM00563	Phosphate acyltransferases
BCR61_24215	SM00155	Phospholipase D. Active site motifs.
BCR61_24220	SM00867	YceI-like domain 
BCR61_24225	SM00855	Phosphoglycerate mutase family
BCR61_24250	SM00530	Helix-turn-helix XRE-family like proteins 
BCR61_24280	SM00382	ATPases associated with a variety of cellular activities
BCR61_24295	SM00382	ATPases associated with a variety of cellular activities
BCR61_24310	SM01126	BCR61_24310
BCR61_24350	SM00829	Enoylreductase
BCR61_24380	SM00487	DEAD-like helicases superfamily
BCR61_24380	SM00490	helicase superfamily c-terminal domain
BCR61_24380	SM00847	Helicase associated domain (HA2)  Add an annotation
BCR61_24390	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BCR61_24450	SM00421	helix_turn_helix, Lux Regulon
BCR61_24450	SM00448	cheY-homologous receiver domain
BCR61_24575	SM00155	Phospholipase D. Active site motifs.
BCR61_24600	SM01126	BCR61_24600
BCR61_24655	SM00729	Elongator protein 3, MiaB family, Radical SAM
BCR61_24690	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BCR61_24690	SM00245	tail specific protease
BCR61_24765	SM00347	helix_turn_helix multiple antibiotic resistance protein
BCR61_24875	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
BCR61_24910	SM00014	Acid phosphatase homologues
BCR61_24920	SM00028	Tetratricopeptide repeats
BCR61_25095	SM00857	Resolvase, N terminal domain
