locus-tag class description IXO1088_000010 PF11638 DnaA N-terminal domain IXO1088_000010 PF08299 Bacterial dnaA protein helix-turn-helix IXO1088_000010 PF00308 Bacterial dnaA protein IXO1088_000015 PF02767 DNA polymerase III beta subunit, central domain IXO1088_000015 PF02768 DNA polymerase III beta subunit, C-terminal domain IXO1088_000015 PF00712 DNA polymerase III beta subunit, N-terminal domain IXO1088_000025 PF02463 RecF/RecN/SMC N terminal domain IXO1088_000030 PF01751 Toprim domain IXO1088_000030 PF18053 DNA gyrase B subunit insert domain IXO1088_000030 PF00204 DNA gyrase B IXO1088_000030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_000030 PF00986 DNA gyrase B subunit, carboxyl terminus IXO1088_000040 PF01435 Peptidase family M48 IXO1088_000050 PF03544 Gram-negative bacterial TonB protein C-terminal IXO1088_000055 PF01618 MotA/TolQ/ExbB proton channel family IXO1088_000060 PF02472 Biopolymer transport protein ExbD/TolR IXO1088_000065 PF02472 Biopolymer transport protein ExbD/TolR IXO1088_000070 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ IXO1088_000080 PF13091 PLD-like domain IXO1088_000080 PF13396 Phospholipase_D-nuclease N-terminal IXO1088_000090 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain IXO1088_000095 PF00155 Aminotransferase class I and II IXO1088_000100 PF00593 TonB dependent receptor IXO1088_000100 PF07715 TonB-dependent Receptor Plug Domain IXO1088_000115 PF01609 Transposase DDE domain IXO1088_000115 PF05598 Transposase domain (DUF772) IXO1088_000120 PF01070 FMN-dependent dehydrogenase IXO1088_000140 PF07055 Enoyl reductase FAD binding domain IXO1088_000140 PF12241 Trans-2-enoyl-CoA reductase catalytic region IXO1088_000140 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase IXO1088_000150 PF00294 pfkB family carbohydrate kinase IXO1088_000230 PF00293 NUDIX domain IXO1088_000230 PF13344 Haloacid dehalogenase-like hydrolase IXO1088_000245 PF00665 Integrase core domain IXO1088_000245 PF13936 Helix-turn-helix domain IXO1088_000270 PF01609 Transposase DDE domain IXO1088_000270 PF05598 Transposase domain (DUF772) IXO1088_000280 PF01370 NAD dependent epimerase/dehydratase family IXO1088_000280 PF08338 Domain of unknown function (DUF1731) IXO1088_000290 PF08521 Two-component sensor kinase N-terminal IXO1088_000290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_000290 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_000300 PF00595 PDZ domain IXO1088_000330 PF05819 NolX protein IXO1088_000380 PF01313 Bacterial export proteins, family 3 IXO1088_000385 PF00813 FliP family IXO1088_000400 PF00771 FHIPEP family IXO1088_000405 PF01312 FlhB HrpN YscU SpaS Family IXO1088_000420 PF01514 Secretory protein of YscJ/FliF family IXO1088_000435 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IXO1088_000435 PF02874 ATP synthase alpha/beta family, beta-barrel domain IXO1088_000435 PF18269 T3SS EscN ATPase C-terminal domain IXO1088_000445 PF01311 Bacterial export proteins, family 1 IXO1088_000450 PF03958 Bacterial type II/III secretion system short domain IXO1088_000450 PF00263 Bacterial type II and III secretion system protein IXO1088_000460 PF01464 Transglycosylase SLT domain IXO1088_000485 PF00924 Mechanosensitive ion channel IXO1088_000485 PF12795 Mechanosensitive ion channel porin domain IXO1088_000485 PF12794 Mechanosensitive ion channel inner membrane domain 1 IXO1088_000500 PF03109 ABC1 family IXO1088_000510 PF05661 Protein of unknown function (DUF808) IXO1088_000520 PF00072 Response regulator receiver domain IXO1088_000520 PF00990 Diguanylate cyclase, GGDEF domain IXO1088_000525 PF00534 Glycosyl transferases group 1 IXO1088_000525 PF08323 Starch synthase catalytic domain IXO1088_000530 PF00128 Alpha amylase, catalytic domain IXO1088_000530 PF02806 Alpha amylase, C-terminal all-beta domain IXO1088_000530 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IXO1088_000535 PF11941 Domain of unknown function (DUF3459) IXO1088_000535 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IXO1088_000535 PF00128 Alpha amylase, catalytic domain IXO1088_000540 PF02446 4-alpha-glucanotransferase IXO1088_000545 PF00128 Alpha amylase, catalytic domain IXO1088_000555 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IXO1088_000555 PF00128 Alpha amylase, catalytic domain IXO1088_000560 PF13460 NAD(P)H-binding IXO1088_000575 PF03150 Di-haem cytochrome c peroxidase IXO1088_000640 PF06903 VirK protein IXO1088_000655 PF00270 DEAD/DEAH box helicase IXO1088_000655 PF00271 Helicase conserved C-terminal domain IXO1088_000665 PF05598 Transposase domain (DUF772) IXO1088_000665 PF01609 Transposase DDE domain IXO1088_000695 PF08845 Toxin SymE, type I toxin-antitoxin system IXO1088_000715 PF03006 Haemolysin-III related IXO1088_000720 PF00271 Helicase conserved C-terminal domain IXO1088_000720 PF09369 Domain of unknown function (DUF1998) IXO1088_000720 PF00270 DEAD/DEAH box helicase IXO1088_000780 PF04898 Glutamate synthase central domain IXO1088_000780 PF01645 Conserved region in glutamate synthase IXO1088_000780 PF01493 GXGXG motif IXO1088_000780 PF00310 Glutamine amidotransferases class-II IXO1088_000785 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IXO1088_000785 PF07992 Pyridine nucleotide-disulphide oxidoreductase IXO1088_000820 PF05598 Transposase domain (DUF772) IXO1088_000830 PF00356 Bacterial regulatory proteins, lacI family IXO1088_000860 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IXO1088_000860 PF02806 Alpha amylase, C-terminal all-beta domain IXO1088_000860 PF00128 Alpha amylase, catalytic domain IXO1088_000865 PF00128 Alpha amylase, catalytic domain IXO1088_000865 PF16657 Maltogenic Amylase, C-terminal domain IXO1088_000870 PF00128 Alpha amylase, catalytic domain IXO1088_000870 PF11896 Domain of unknown function (DUF3416) IXO1088_000910 PF01609 Transposase DDE domain IXO1088_000910 PF05598 Transposase domain (DUF772) IXO1088_000925 PF13332 Hemagglutinin repeat IXO1088_000925 PF04829 Pre-toxin domain with VENN motif IXO1088_000925 PF05860 haemagglutination activity domain IXO1088_000940 PF01078 Magnesium chelatase, subunit ChlI IXO1088_000940 PF13335 Magnesium chelatase, subunit ChlI C-terminal IXO1088_000945 PF04380 Membrane fusogenic activity IXO1088_000950 PF00543 Nitrogen regulatory protein P-II IXO1088_000990 PF17284 Spermidine synthase tetramerisation domain IXO1088_000995 PF17810 Arginine decarboxylase helical bundle domain IXO1088_000995 PF17944 Arginine decarboxylase C-terminal helical extension IXO1088_000995 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IXO1088_001005 PF04717 Type VI secretion system, phage-baseplate injector IXO1088_001005 PF16671 Actin cross-linking domain IXO1088_001030 PF13932 GidA associated domain IXO1088_001030 PF01134 Glucose inhibited division protein A IXO1088_001045 PF00291 Pyridoxal-phosphate dependent enzyme IXO1088_001065 PF13649 Methyltransferase domain IXO1088_001075 PF12697 Alpha/beta hydrolase family IXO1088_001095 PF04349 Periplasmic glucan biosynthesis protein, MdoG IXO1088_001105 PF00265 Thymidine kinase IXO1088_001110 PF13361 UvrD-like helicase C-terminal domain IXO1088_001110 PF00580 UvrD/REP helicase N-terminal domain IXO1088_001125 PF04337 Protein of unknown function, DUF480 IXO1088_001130 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) IXO1088_001135 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IXO1088_001140 PF04820 Tryptophan halogenase IXO1088_001155 PF00356 Bacterial regulatory proteins, lacI family IXO1088_001210 PF01734 Patatin-like phospholipase IXO1088_001220 PF00005 ABC transporter IXO1088_001235 PF00571 CBS domain IXO1088_001235 PF00005 ABC transporter IXO1088_001240 PF00528 Binding-protein-dependent transport system inner membrane component IXO1088_001250 PF03781 Sulfatase-modifying factor enzyme 1 IXO1088_001250 PF12867 DinB superfamily IXO1088_001255 PF10017 Histidine-specific methyltransferase, SAM-dependent IXO1088_001260 PF07804 HipA-like C-terminal domain IXO1088_001260 PF13657 HipA N-terminal domain IXO1088_001265 PF01381 Helix-turn-helix IXO1088_001285 PF10609 NUBPL iron-transfer P-loop NTPase IXO1088_001285 PF01883 Iron-sulfur cluster assembly protein IXO1088_001300 PF13091 PLD-like domain IXO1088_001305 PF03061 Thioesterase superfamily IXO1088_001345 PF02673 Bacitracin resistance protein BacA IXO1088_001350 PF03951 Glutamine synthetase, beta-Grasp domain IXO1088_001350 PF00120 Glutamine synthetase, catalytic domain IXO1088_001355 PF00543 Nitrogen regulatory protein P-II IXO1088_001360 PF00909 Ammonium Transporter Family IXO1088_001365 PF00989 PAS fold IXO1088_001365 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_001365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_001370 PF00158 Sigma-54 interaction domain IXO1088_001370 PF00072 Response regulator receiver domain IXO1088_001370 PF02954 Bacterial regulatory protein, Fis family IXO1088_001375 PF00080 Copper/zinc superoxide dismutase (SODC) IXO1088_001380 PF00080 Copper/zinc superoxide dismutase (SODC) IXO1088_001450 PF17946 RecC C-terminal domain IXO1088_001455 PF13361 UvrD-like helicase C-terminal domain IXO1088_001455 PF00580 UvrD/REP helicase N-terminal domain IXO1088_001455 PF12705 PD-(D/E)XK nuclease superfamily IXO1088_001460 PF13538 UvrD-like helicase C-terminal domain IXO1088_001465 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB IXO1088_001470 PF01381 Helix-turn-helix IXO1088_001555 PF02566 OsmC-like protein IXO1088_001560 PF01047 MarR family IXO1088_001595 PF00440 Bacterial regulatory proteins, tetR family IXO1088_001600 PF00175 Oxidoreductase NAD-binding domain IXO1088_001600 PF00111 2Fe-2S iron-sulfur cluster binding domain IXO1088_001600 PF00970 Oxidoreductase FAD-binding domain IXO1088_001605 PF00487 Fatty acid desaturase IXO1088_001610 PF12792 CSS motif domain associated with EAL IXO1088_001610 PF00563 EAL domain IXO1088_001645 PF04616 Glycosyl hydrolases family 43 IXO1088_001675 PF00331 Glycosyl hydrolase family 10 IXO1088_001675 PF03422 Carbohydrate binding module (family 6) IXO1088_001675 PF00553 Cellulose binding domain IXO1088_001680 PF02614 Glucuronate isomerase IXO1088_001700 PF01232 Mannitol dehydrogenase Rossmann domain IXO1088_001700 PF08125 Mannitol dehydrogenase C-terminal domain IXO1088_001705 PF01915 Glycosyl hydrolase family 3 C-terminal domain IXO1088_001705 PF00933 Glycosyl hydrolase family 3 N terminal domain IXO1088_001705 PF14310 Fibronectin type III-like domain IXO1088_001705 PF07691 PA14 domain IXO1088_001710 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain IXO1088_001710 PF04616 Glycosyl hydrolases family 43 IXO1088_001715 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IXO1088_001715 PF13378 Enolase C-terminal domain-like IXO1088_001725 PF07488 Glycosyl hydrolase family 67 middle domain IXO1088_001725 PF03648 Glycosyl hydrolase family 67 N-terminus IXO1088_001725 PF07477 Glycosyl hydrolase family 67 C-terminus IXO1088_001730 PF00356 Bacterial regulatory proteins, lacI family IXO1088_001745 PF01171 PP-loop family IXO1088_001750 PF04381 Putative exonuclease, RdgC IXO1088_001770 PF12697 Alpha/beta hydrolase family IXO1088_001775 PF00762 Ferrochelatase IXO1088_001785 PF02416 mttA/Hcf106 family IXO1088_001790 PF02416 mttA/Hcf106 family IXO1088_001795 PF00902 Sec-independent protein translocase protein (TatC) IXO1088_001805 PF00958 GMP synthase C terminal domain IXO1088_001805 PF00117 Glutamine amidotransferase class-I IXO1088_001830 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IXO1088_001830 PF00437 Type II/IV secretion system protein IXO1088_001835 PF02091 Glycyl-tRNA synthetase alpha subunit IXO1088_001840 PF02092 Glycyl-tRNA synthetase beta subunit IXO1088_001840 PF05746 DALR anticodon binding domain IXO1088_001845 PF13181 Tetratricopeptide repeat IXO1088_001850 PF07715 TonB-dependent Receptor Plug Domain IXO1088_001850 PF00593 TonB dependent receptor IXO1088_001865 PF03969 AFG1-like ATPase IXO1088_001885 PF02492 CobW/HypB/UreG, nucleotide-binding domain IXO1088_001885 PF07683 Cobalamin synthesis protein cobW C-terminal domain IXO1088_001940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IXO1088_001940 PF02770 Acyl-CoA dehydrogenase, middle domain IXO1088_001940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IXO1088_001945 PF01039 Carboxyl transferase domain IXO1088_001950 PF02785 Biotin carboxylase C-terminal domain IXO1088_001950 PF00289 Biotin carboxylase, N-terminal domain IXO1088_001950 PF18140 Propionyl-coenzyme A carboxylase BT domain IXO1088_001950 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IXO1088_001950 PF00364 Biotin-requiring enzyme IXO1088_001955 PF00326 Prolyl oligopeptidase family IXO1088_002005 PF13454 FAD-NAD(P)-binding IXO1088_002010 PF01014 Uricase IXO1088_002010 PF09349 OHCU decarboxylase IXO1088_002025 PF00266 Aminotransferase class-V IXO1088_002070 PF01026 TatD related DNase IXO1088_002090 PF03466 LysR substrate binding domain IXO1088_002090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO1088_002095 PF07690 Major Facilitator Superfamily IXO1088_002105 PF02146 Sir2 family IXO1088_002110 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IXO1088_002115 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IXO1088_002115 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IXO1088_002135 PF00551 Formyl transferase IXO1088_002140 PF00072 Response regulator receiver domain IXO1088_002140 PF00486 Transcriptional regulatory protein, C terminal IXO1088_002160 PF02677 Epoxyqueuosine reductase QueH IXO1088_002165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO1088_002165 PF03466 LysR substrate binding domain IXO1088_002170 PF03358 NADPH-dependent FMN reductase IXO1088_002180 PF01717 Cobalamin-independent synthase, Catalytic domain IXO1088_002180 PF08267 Cobalamin-independent synthase, N-terminal domain IXO1088_002185 PF03812 2-keto-3-deoxygluconate permease IXO1088_002195 PF05368 NmrA-like family IXO1088_002200 PF01638 HxlR-like helix-turn-helix IXO1088_002255 PF04820 Tryptophan halogenase IXO1088_002260 PF00550 Phosphopantetheine attachment site IXO1088_002270 PF01553 Acyltransferase IXO1088_002275 PF07977 FabA-like domain IXO1088_002310 PF04357 TamB, inner membrane protein subunit of TAM complex IXO1088_002315 PF01103 Surface antigen IXO1088_002315 PF17243 POTRA domain TamA domain 1 IXO1088_002330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IXO1088_002330 PF07497 Rho termination factor, RNA-binding domain IXO1088_002330 PF07498 Rho termination factor, N-terminal domain IXO1088_002335 PF00085 Thioredoxin IXO1088_002340 PF00270 DEAD/DEAH box helicase IXO1088_002340 PF00271 Helicase conserved C-terminal domain IXO1088_002340 PF12300 ATP-dependent RNA helicase RhlB IXO1088_002345 PF00005 ABC transporter IXO1088_002350 PF18075 FtsX extracellular domain IXO1088_002355 PF00072 Response regulator receiver domain IXO1088_002360 PF03167 Uracil DNA glycosylase superfamily IXO1088_002365 PF04542 Sigma-70 region 2 IXO1088_002365 PF04545 Sigma-70, region 4 IXO1088_002375 PF07992 Pyridine nucleotide-disulphide oxidoreductase IXO1088_002395 PF00166 Chaperonin 10 Kd subunit IXO1088_002400 PF00118 TCP-1/cpn60 chaperonin family IXO1088_002410 PF00593 TonB dependent receptor IXO1088_002410 PF07715 TonB-dependent Receptor Plug Domain IXO1088_002425 PF00793 DAHP synthetase I family IXO1088_002470 PF08450 SMP-30/Gluconolactonase/LRE-like region IXO1088_002480 PF08335 GlnD PII-uridylyltransferase IXO1088_002480 PF03710 Glutamate-ammonia ligase adenylyltransferase IXO1088_002485 PF02592 Putative vitamin uptake transporter IXO1088_002515 PF00881 Nitroreductase family IXO1088_002520 PF04264 YceI-like domain IXO1088_002550 PF13276 HTH-like domain IXO1088_002550 PF00665 Integrase core domain IXO1088_002550 PF13333 Integrase core domain IXO1088_002560 PF03377 TAL effector repeat IXO1088_002575 PF17831 Pyruvate dehydrogenase E1 component middle domain IXO1088_002575 PF00456 Transketolase, thiamine diphosphate binding domain IXO1088_002600 PF01612 3'-5' exonuclease IXO1088_002600 PF00476 DNA polymerase family A IXO1088_002600 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IXO1088_002600 PF01367 5'-3' exonuclease, C-terminal SAM fold IXO1088_002620 PF01218 Coproporphyrinogen III oxidase IXO1088_002630 PF05598 Transposase domain (DUF772) IXO1088_002630 PF01609 Transposase DDE domain IXO1088_002650 PF13495 Phage integrase, N-terminal SAM-like domain IXO1088_002650 PF00589 Phage integrase family IXO1088_002655 PF00920 Dehydratase family IXO1088_002660 PF03692 Putative zinc- or iron-chelating domain IXO1088_002665 PF00132 Bacterial transferase hexapeptide (six repeats) IXO1088_002670 PF07690 Major Facilitator Superfamily IXO1088_002675 PF01966 HD domain IXO1088_002675 PF11871 Domain of unknown function (DUF3391) IXO1088_002705 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family IXO1088_002710 PF00501 AMP-binding enzyme IXO1088_002715 PF03692 Putative zinc- or iron-chelating domain IXO1088_002720 PF00561 alpha/beta hydrolase fold IXO1088_002735 PF01555 DNA methylase IXO1088_002740 PF13784 Fic/DOC family N-terminal IXO1088_002740 PF02661 Fic/DOC family IXO1088_002745 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IXO1088_002745 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IXO1088_002760 PF00588 SpoU rRNA Methylase family IXO1088_002765 PF07690 Major Facilitator Superfamily IXO1088_002780 PF02954 Bacterial regulatory protein, Fis family IXO1088_002780 PF00072 Response regulator receiver domain IXO1088_002780 PF00158 Sigma-54 interaction domain IXO1088_002785 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_002785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_002800 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IXO1088_002800 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IXO1088_002805 PF02556 Preprotein translocase subunit SecB IXO1088_002810 PF00581 Rhodanese-like domain IXO1088_002840 PF07063 Domain of unknown function (DUF1338) IXO1088_002850 PF00873 AcrB/AcrD/AcrF family IXO1088_002855 PF00873 AcrB/AcrD/AcrF family IXO1088_002860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IXO1088_002865 PF01546 Peptidase family M20/M25/M40 IXO1088_002865 PF07687 Peptidase dimerisation domain IXO1088_002875 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term IXO1088_002875 PF14489 QueF-like protein IXO1088_002935 PF05598 Transposase domain (DUF772) IXO1088_002945 PF03971 Monomeric isocitrate dehydrogenase IXO1088_002970 PF00117 Glutamine amidotransferase class-I IXO1088_002980 PF02885 Glycosyl transferase family, helical bundle domain IXO1088_002980 PF00591 Glycosyl transferase family, a/b domain IXO1088_002985 PF00218 Indole-3-glycerol phosphate synthase IXO1088_002995 PF00027 Cyclic nucleotide-binding domain IXO1088_002995 PF00325 Bacterial regulatory proteins, crp family IXO1088_003000 PF02675 S-adenosylmethionine decarboxylase IXO1088_003005 PF00893 Small Multidrug Resistance protein IXO1088_003010 PF03232 Ubiquinone biosynthesis protein COQ7 IXO1088_003015 PF00572 Ribosomal protein L13 IXO1088_003020 PF00380 Ribosomal protein S9/S16 IXO1088_003035 PF00293 NUDIX domain IXO1088_003045 PF00210 Ferritin-like domain IXO1088_003060 PF01619 Proline dehydrogenase IXO1088_003060 PF18327 Proline utilization A proline dehydrogenase N-terminal domain IXO1088_003060 PF00171 Aldehyde dehydrogenase family IXO1088_003060 PF14850 DNA-binding domain of Proline dehydrogenase IXO1088_003070 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IXO1088_003070 PF02790 Cytochrome C oxidase subunit II, transmembrane domain IXO1088_003075 PF00115 Cytochrome C and Quinol oxidase polypeptide I IXO1088_003085 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 IXO1088_003090 PF00510 Cytochrome c oxidase subunit III IXO1088_003115 PF01040 UbiA prenyltransferase family IXO1088_003130 PF13593 SBF-like CPA transporter family (DUF4137) IXO1088_003155 PF05598 Transposase domain (DUF772) IXO1088_003155 PF01609 Transposase DDE domain IXO1088_003180 PF02322 Cytochrome bd terminal oxidase subunit II IXO1088_003185 PF01654 Cytochrome bd terminal oxidase subunit I IXO1088_003200 PF00072 Response regulator receiver domain IXO1088_003200 PF00158 Sigma-54 interaction domain IXO1088_003200 PF02954 Bacterial regulatory protein, Fis family IXO1088_003245 PF00672 HAMP domain IXO1088_003245 PF02743 Cache domain IXO1088_003245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_003245 PF06580 Histidine kinase IXO1088_003250 PF00072 Response regulator receiver domain IXO1088_003250 PF04397 LytTr DNA-binding domain IXO1088_003260 PF13520 Amino acid permease IXO1088_003280 PF05649 Peptidase family M13 IXO1088_003280 PF01431 Peptidase family M13 IXO1088_003295 PF00248 Aldo/keto reductase family IXO1088_003300 PF03358 NADPH-dependent FMN reductase IXO1088_003310 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IXO1088_003320 PF03167 Uracil DNA glycosylase superfamily IXO1088_003330 PF02469 Fasciclin domain IXO1088_003345 PF00999 Sodium/hydrogen exchanger family IXO1088_003350 PF00005 ABC transporter IXO1088_003355 PF01061 ABC-2 type transporter IXO1088_003370 PF00082 Subtilase family IXO1088_003370 PF04151 Bacterial pre-peptidase C-terminal domain IXO1088_003380 PF13188 PAS domain IXO1088_003380 PF08448 PAS fold IXO1088_003380 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_003380 PF00072 Response regulator receiver domain IXO1088_003380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_003385 PF00072 Response regulator receiver domain IXO1088_003385 PF00486 Transcriptional regulatory protein, C terminal IXO1088_003405 PF13677 Membrane MotB of proton-channel complex MotA/MotB IXO1088_003405 PF00691 OmpA family IXO1088_003410 PF01618 MotA/TolQ/ExbB proton channel family IXO1088_003420 PF01641 SelR domain IXO1088_003435 PF01266 FAD dependent oxidoreductase IXO1088_003440 PF01168 Alanine racemase, N-terminal domain IXO1088_003440 PF00842 Alanine racemase, C-terminal domain IXO1088_003460 PF00989 PAS fold IXO1088_003460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_003460 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_003475 PF07995 Glucose / Sorbosone dehydrogenase IXO1088_003490 PF05175 Methyltransferase small domain IXO1088_003490 PF08468 Methyltransferase small domain N-terminal IXO1088_003495 PF01479 S4 domain IXO1088_003495 PF00849 RNA pseudouridylate synthase IXO1088_003500 PF13419 Haloacid dehalogenase-like hydrolase IXO1088_003530 PF04461 Protein of unknown function (DUF520) IXO1088_003535 PF00892 EamA-like transporter family IXO1088_003540 PF09383 NIL domain IXO1088_003540 PF00005 ABC transporter IXO1088_003545 PF00528 Binding-protein-dependent transport system inner membrane component IXO1088_003550 PF03180 NLPA lipoprotein IXO1088_003575 PF00364 Biotin-requiring enzyme IXO1088_003575 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IXO1088_003575 PF02817 e3 binding domain IXO1088_003585 PF07992 Pyridine nucleotide-disulphide oxidoreductase IXO1088_003585 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IXO1088_003605 PF00119 ATP synthase A chain IXO1088_003610 PF00137 ATP synthase subunit C IXO1088_003615 PF00430 ATP synthase B/B' CF(0) IXO1088_003620 PF00213 ATP synthase delta (OSCP) subunit IXO1088_003625 PF02874 ATP synthase alpha/beta family, beta-barrel domain IXO1088_003625 PF00306 ATP synthase alpha/beta chain, C terminal domain IXO1088_003625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IXO1088_003630 PF00231 ATP synthase IXO1088_003635 PF02874 ATP synthase alpha/beta family, beta-barrel domain IXO1088_003635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IXO1088_003640 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IXO1088_003645 PF01817 Chorismate mutase type II IXO1088_003655 PF00132 Bacterial transferase hexapeptide (six repeats) IXO1088_003655 PF14602 Hexapeptide repeat of succinyl-transferase IXO1088_003655 PF12804 MobA-like NTP transferase domain IXO1088_003690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IXO1088_003695 PF01380 SIS domain IXO1088_003720 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IXO1088_003725 PF05275 Copper resistance protein B precursor (CopB) IXO1088_003730 PF00394 Multicopper oxidase IXO1088_003730 PF07732 Multicopper oxidase IXO1088_003730 PF07731 Multicopper oxidase IXO1088_003745 PF01432 Peptidase family M3 IXO1088_003755 PF00109 Beta-ketoacyl synthase, N-terminal domain IXO1088_003755 PF02801 Beta-ketoacyl synthase, C-terminal domain IXO1088_003760 PF07977 FabA-like domain IXO1088_003770 PF00817 impB/mucB/samB family IXO1088_003770 PF11799 impB/mucB/samB family C-terminal domain IXO1088_003775 PF13419 Haloacid dehalogenase-like hydrolase IXO1088_003785 PF13185 GAF domain IXO1088_003800 PF01242 6-pyruvoyl tetrahydropterin synthase IXO1088_003810 PF00270 DEAD/DEAH box helicase IXO1088_003810 PF00271 Helicase conserved C-terminal domain IXO1088_003825 PF02798 Glutathione S-transferase, N-terminal domain IXO1088_003825 PF14497 Glutathione S-transferase, C-terminal domain IXO1088_003830 PF00437 Type II/IV secretion system protein IXO1088_003850 PF00571 CBS domain IXO1088_003850 PF00291 Pyridoxal-phosphate dependent enzyme IXO1088_003855 PF01053 Cys/Met metabolism PLP-dependent enzyme IXO1088_003865 PF01370 NAD dependent epimerase/dehydratase family IXO1088_003905 PF00872 Transposase, Mutator family IXO1088_003915 PF00005 ABC transporter IXO1088_003925 PF00766 Electron transfer flavoprotein FAD-binding domain IXO1088_003925 PF01012 Electron transfer flavoprotein domain IXO1088_003930 PF01012 Electron transfer flavoprotein domain IXO1088_003935 PF16363 GDP-mannose 4,6 dehydratase IXO1088_003940 PF00483 Nucleotidyl transferase IXO1088_003945 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase IXO1088_003950 PF04321 RmlD substrate binding domain IXO1088_003955 PF00483 Nucleotidyl transferase IXO1088_003955 PF01050 Mannose-6-phosphate isomerase IXO1088_003960 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IXO1088_003960 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IXO1088_003960 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IXO1088_003960 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IXO1088_003965 PF01144 Coenzyme A transferase IXO1088_003970 PF01144 Coenzyme A transferase IXO1088_003975 PF05045 Rhamnan synthesis protein F IXO1088_003975 PF14307 Glycosyltransferase WbsX IXO1088_004000 PF03886 ABC-type transport auxiliary lipoprotein component IXO1088_004000 PF02470 MlaD protein IXO1088_004005 PF00005 ABC transporter IXO1088_004010 PF02405 Permease MlaE IXO1088_004020 PF00816 H-NS histone family IXO1088_004025 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IXO1088_004025 PF04073 Aminoacyl-tRNA editing domain IXO1088_004025 PF03129 Anticodon binding domain IXO1088_004035 PF01066 CDP-alcohol phosphatidyltransferase IXO1088_004070 PF01609 Transposase DDE domain IXO1088_004070 PF05598 Transposase domain (DUF772) IXO1088_004080 PF01464 Transglycosylase SLT domain IXO1088_004080 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain IXO1088_004085 PF00544 Pectate lyase IXO1088_004095 PF05598 Transposase domain (DUF772) IXO1088_004095 PF01609 Transposase DDE domain IXO1088_004125 PF00133 tRNA synthetases class I (I, L, M and V) IXO1088_004125 PF10458 Valyl tRNA synthetase tRNA binding arm IXO1088_004125 PF08264 Anticodon-binding domain of tRNA IXO1088_004140 PF02789 Cytosol aminopeptidase family, N-terminal domain IXO1088_004140 PF00883 Cytosol aminopeptidase family, catalytic domain IXO1088_004150 PF03739 Lipopolysaccharide export system permease LptF/LptG IXO1088_004165 PF02899 Phage integrase, N-terminal SAM-like domain IXO1088_004165 PF00589 Phage integrase family IXO1088_004170 PF10411 Disulfide bond isomerase protein N-terminus IXO1088_004170 PF13098 Thioredoxin-like domain IXO1088_004175 PF02769 AIR synthase related protein, C-terminal domain IXO1088_004175 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain IXO1088_004175 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal IXO1088_004185 PF05658 Head domain of trimeric autotransporter adhesin IXO1088_004185 PF05662 Coiled stalk of trimeric autotransporter adhesin IXO1088_004185 PF03895 YadA-like membrane anchor domain IXO1088_004185 PF13018 Extended Signal Peptide of Type V secretion system IXO1088_004195 PF00437 Type II/IV secretion system protein IXO1088_004195 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IXO1088_004205 PF00482 Type II secretion system (T2SS), protein F IXO1088_004210 PF08334 Type II secretion system (T2SS), protein G IXO1088_004215 PF12019 Type II transport protein GspH IXO1088_004220 PF07963 Prokaryotic N-terminal methylation motif IXO1088_004230 PF03934 Type II secretion system (T2SS), protein K IXO1088_004235 PF05137 Fimbrial assembly protein (PilN) IXO1088_004240 PF10741 Type II secretion system (T2SS), protein M subtype b IXO1088_004250 PF00263 Bacterial type II and III secretion system protein IXO1088_004250 PF03958 Bacterial type II/III secretion system short domain IXO1088_004260 PF07702 UTRA domain IXO1088_004260 PF00392 Bacterial regulatory proteins, gntR family IXO1088_004275 PF07715 TonB-dependent Receptor Plug Domain IXO1088_004275 PF00593 TonB dependent receptor IXO1088_004320 PF09827 CRISPR associated protein Cas2 IXO1088_004325 PF01867 CRISPR associated protein Cas1 IXO1088_004345 PF09704 CRISPR-associated protein (Cas_Cas5) IXO1088_004365 PF02545 Maf-like protein IXO1088_004370 PF02620 Large ribosomal RNA subunit accumulation protein YceD IXO1088_004375 PF01783 Ribosomal L32p protein family IXO1088_004380 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IXO1088_004380 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IXO1088_004390 PF00698 Acyl transferase domain IXO1088_004400 PF00550 Phosphopantetheine attachment site IXO1088_004405 PF00109 Beta-ketoacyl synthase, N-terminal domain IXO1088_004405 PF02801 Beta-ketoacyl synthase, C-terminal domain IXO1088_004410 PF04715 Anthranilate synthase component I, N terminal region IXO1088_004410 PF00425 chorismate binding enzyme IXO1088_004415 PF02618 YceG-like family IXO1088_004420 PF09115 DNA polymerase III, delta subunit, C terminal IXO1088_004450 PF06506 Propionate catabolism activator IXO1088_004450 PF00158 Sigma-54 interaction domain IXO1088_004450 PF02954 Bacterial regulatory protein, Fis family IXO1088_004460 PF00285 Citrate synthase, C-terminal domain IXO1088_004465 PF00694 Aconitase C-terminal domain IXO1088_004465 PF00330 Aconitase family (aconitate hydratase) IXO1088_004480 PF04303 PrpF protein IXO1088_004485 PF07715 TonB-dependent Receptor Plug Domain IXO1088_004485 PF00593 TonB dependent receptor IXO1088_004560 PF13936 Helix-turn-helix domain IXO1088_004560 PF00665 Integrase core domain IXO1088_004570 PF08534 Redoxin IXO1088_004580 PF00226 DnaJ domain IXO1088_004580 PF01556 DnaJ C terminal domain IXO1088_004585 PF00072 Response regulator receiver domain IXO1088_004590 PF01145 SPFH domain / Band 7 family IXO1088_004590 PF12221 Bacterial membrane protein N terminal IXO1088_004595 PF01145 SPFH domain / Band 7 family IXO1088_004605 PF00709 Adenylosuccinate synthetase IXO1088_004610 PF01433 Peptidase family M1 domain IXO1088_004610 PF11838 ERAP1-like C-terminal domain IXO1088_004660 PF03279 Bacterial lipid A biosynthesis acyltransferase IXO1088_004665 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) IXO1088_004670 PF02321 Outer membrane efflux protein IXO1088_004700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO1088_004705 PF00330 Aconitase family (aconitate hydratase) IXO1088_004710 PF00694 Aconitase C-terminal domain IXO1088_004720 PF00180 Isocitrate/isopropylmalate dehydrogenase IXO1088_004725 PF08502 LeuA allosteric (dimerisation) domain IXO1088_004725 PF00682 HMGL-like IXO1088_004730 PF00291 Pyridoxal-phosphate dependent enzyme IXO1088_004740 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IXO1088_004740 PF00205 Thiamine pyrophosphate enzyme, central domain IXO1088_004740 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IXO1088_004745 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain IXO1088_004745 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain IXO1088_004755 PF01964 Radical SAM ThiC family IXO1088_004755 PF13667 ThiC-associated domain IXO1088_004760 PF18500 CadC C-terminal domain 1 IXO1088_004760 PF00486 Transcriptional regulatory protein, C terminal IXO1088_004765 PF12833 Helix-turn-helix domain IXO1088_004770 PF00593 TonB dependent receptor IXO1088_004770 PF07715 TonB-dependent Receptor Plug Domain IXO1088_004785 PF00719 Inorganic pyrophosphatase IXO1088_004795 PF03030 Inorganic H+ pyrophosphatase IXO1088_004805 PF03030 Inorganic H+ pyrophosphatase IXO1088_004825 PF00365 Phosphofructokinase IXO1088_004835 PF02875 Mur ligase family, glutamate ligase domain IXO1088_004835 PF08245 Mur ligase middle domain IXO1088_004835 PF01225 Mur ligase family, catalytic domain IXO1088_004845 PF01062 Bestrophin, RFP-TM, chloride channel IXO1088_005000 PF02600 Disulfide bond formation protein DsbB IXO1088_005015 PF01474 Class-II DAHP synthetase family IXO1088_005040 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IXO1088_005045 PF00056 lactate/malate dehydrogenase, NAD binding domain IXO1088_005045 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IXO1088_005085 PF05598 Transposase domain (DUF772) IXO1088_005085 PF01609 Transposase DDE domain IXO1088_005110 PF03009 Glycerophosphoryl diester phosphodiesterase family IXO1088_005140 PF07992 Pyridine nucleotide-disulphide oxidoreductase IXO1088_005140 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IXO1088_005145 PF00107 Zinc-binding dehydrogenase IXO1088_005145 PF08240 Alcohol dehydrogenase GroES-like domain IXO1088_005155 PF05736 OprF membrane domain IXO1088_005155 PF00691 OmpA family IXO1088_005165 PF00849 RNA pseudouridylate synthase IXO1088_005175 PF00155 Aminotransferase class I and II IXO1088_005185 PF00528 Binding-protein-dependent transport system inner membrane component IXO1088_005190 PF00528 Binding-protein-dependent transport system inner membrane component IXO1088_005195 PF00005 ABC transporter IXO1088_005195 PF17850 CysA C-terminal regulatory domain IXO1088_005195 PF12857 TOBE-like domain IXO1088_005205 PF00107 Zinc-binding dehydrogenase IXO1088_005205 PF08240 Alcohol dehydrogenase GroES-like domain IXO1088_005225 PF10459 Peptidase S46 IXO1088_005230 PF00300 Histidine phosphatase superfamily (branch 1) IXO1088_005240 PF02875 Mur ligase family, glutamate ligase domain IXO1088_005240 PF08245 Mur ligase middle domain IXO1088_005255 PF00156 Phosphoribosyl transferase domain IXO1088_005260 PF04305 Protein of unknown function (DUF455) IXO1088_005280 PF00149 Calcineurin-like phosphoesterase IXO1088_005285 PF01569 PAP2 superfamily IXO1088_005290 PF13439 Glycosyltransferase Family 4 IXO1088_005290 PF00534 Glycosyl transferases group 1 IXO1088_005295 PF02541 Ppx/GppA phosphatase family IXO1088_005300 PF13090 Polyphosphate kinase C-terminal domain 2 IXO1088_005300 PF02503 Polyphosphate kinase middle domain IXO1088_005300 PF17941 Polyphosphate kinase C-terminal domain 1 IXO1088_005300 PF13089 Polyphosphate kinase N-terminal domain IXO1088_005305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_005305 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_005305 PF00989 PAS fold IXO1088_005305 PF11808 Phosphate regulon sensor protein PhoR IXO1088_005310 PF00486 Transcriptional regulatory protein, C terminal IXO1088_005310 PF00072 Response regulator receiver domain IXO1088_005315 PF13181 Tetratricopeptide repeat IXO1088_005315 PF01435 Peptidase family M48 IXO1088_005320 PF00462 Glutaredoxin IXO1088_005340 PF18324 Hypothetical protein TT1725 IXO1088_005340 PF00180 Isocitrate/isopropylmalate dehydrogenase IXO1088_005395 PF05697 Bacterial trigger factor protein (TF) IXO1088_005395 PF05698 Bacterial trigger factor protein (TF) C-terminus IXO1088_005400 PF00574 Clp protease IXO1088_005405 PF07724 AAA domain (Cdc48 subfamily) IXO1088_005405 PF10431 C-terminal, D2-small domain, of ClpB protein IXO1088_005405 PF06689 ClpX C4-type zinc finger IXO1088_005410 PF00004 ATPase family associated with various cellular activities (AAA) IXO1088_005410 PF05362 Lon protease (S16) C-terminal proteolytic domain IXO1088_005410 PF02190 ATP-dependent protease La (LON) substrate-binding domain IXO1088_005415 PF00216 Bacterial DNA-binding protein IXO1088_005440 PF05257 CHAP domain IXO1088_005440 PF01476 LysM domain IXO1088_005445 PF00753 Metallo-beta-lactamase superfamily IXO1088_005445 PF16123 Hydroxyacylglutathione hydrolase C-terminus IXO1088_005455 PF00075 RNase H IXO1088_005460 PF00929 Exonuclease IXO1088_005495 PF16671 Actin cross-linking domain IXO1088_005495 PF04717 Type VI secretion system, phage-baseplate injector IXO1088_005525 PF00589 Phage integrase family IXO1088_005525 PF13356 Arm DNA-binding domain IXO1088_005535 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IXO1088_005545 PF12706 Beta-lactamase superfamily domain IXO1088_005545 PF00753 Metallo-beta-lactamase superfamily IXO1088_005550 PF04055 Radical SAM superfamily IXO1088_005550 PF06463 Molybdenum Cofactor Synthesis C IXO1088_005560 PF01967 MoaC family IXO1088_005565 PF02597 ThiS family IXO1088_005570 PF02391 MoaE protein IXO1088_005585 PF12169 DNA polymerase III subunits gamma and tau domain III IXO1088_005585 PF12170 DNA polymerase III tau subunit V interacting with alpha IXO1088_005585 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding IXO1088_005590 PF02575 YbaB/EbfC DNA-binding family IXO1088_005595 PF02132 RecR protein IXO1088_005595 PF13662 Toprim domain IXO1088_005600 PF01230 HIT domain IXO1088_005610 PF13559 Domain of unknown function (DUF4129) IXO1088_005610 PF11992 Domain of unknown function (DUF3488) IXO1088_005610 PF01841 Transglutaminase-like superfamily IXO1088_005620 PF07726 ATPase family associated with various cellular activities (AAA) IXO1088_005620 PF17863 AAA lid domain IXO1088_005635 PF03960 ArsC family IXO1088_005640 PF01327 Polypeptide deformylase IXO1088_005690 PF00462 Glutaredoxin IXO1088_005695 PF01522 Polysaccharide deacetylase IXO1088_005720 PF03193 RsgA GTPase IXO1088_005735 PF00128 Alpha amylase, catalytic domain IXO1088_005755 PF00356 Bacterial regulatory proteins, lacI family IXO1088_005760 PF00106 short chain dehydrogenase IXO1088_005765 PF03600 Citrate transporter IXO1088_005780 PF00486 Transcriptional regulatory protein, C terminal IXO1088_005780 PF00072 Response regulator receiver domain IXO1088_005785 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_005785 PF08521 Two-component sensor kinase N-terminal IXO1088_005785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_005795 PF00072 Response regulator receiver domain IXO1088_005795 PF00196 Bacterial regulatory proteins, luxR family IXO1088_005815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO1088_005815 PF03466 LysR substrate binding domain IXO1088_005825 PF07690 Major Facilitator Superfamily IXO1088_005830 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_005830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_005845 PF00375 Sodium:dicarboxylate symporter family IXO1088_005850 PF01515 Phosphate acetyl/butaryl transferase IXO1088_005850 PF03949 Malic enzyme, NAD binding domain IXO1088_005850 PF00390 Malic enzyme, N-terminal domain IXO1088_005915 PF02581 Thiamine monophosphate synthase IXO1088_005920 PF00301 Rubredoxin IXO1088_005925 PF13369 Transglutaminase-like superfamily IXO1088_005935 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IXO1088_005945 PF01812 5-formyltetrahydrofolate cyclo-ligase family IXO1088_005955 PF05164 Cell division protein ZapA IXO1088_005965 PF03695 Uncharacterised protein family (UPF0149) IXO1088_005970 PF05195 Aminopeptidase P, N-terminal domain IXO1088_005970 PF00557 Metallopeptidase family M24 IXO1088_005985 PF00557 Metallopeptidase family M24 IXO1088_006000 PF06969 HemN C-terminal domain IXO1088_006000 PF04055 Radical SAM superfamily IXO1088_006005 PF01725 Ham1 family IXO1088_006010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IXO1088_006015 PF03725 3' exoribonuclease family, domain 2 IXO1088_006015 PF01138 3' exoribonuclease family, domain 1 IXO1088_006020 PF08340 Domain of unknown function (DUF1732) IXO1088_006020 PF03755 YicC-like family, N-terminal region IXO1088_006025 PF00625 Guanylate kinase IXO1088_006040 PF01192 RNA polymerase Rpb6 IXO1088_006045 PF02824 TGS domain IXO1088_006045 PF04607 Region found in RelA / SpoT proteins IXO1088_006045 PF13291 ACT domain IXO1088_006050 PF01042 Endoribonuclease L-PSP IXO1088_006055 PF17191 RecG wedge domain IXO1088_006055 PF00270 DEAD/DEAH box helicase IXO1088_006055 PF00271 Helicase conserved C-terminal domain IXO1088_006060 PF01156 Inosine-uridine preferring nucleoside hydrolase IXO1088_006065 PF01197 Ribosomal protein L31 IXO1088_006070 PF00285 Citrate synthase, C-terminal domain IXO1088_006080 PF00905 Penicillin binding protein transpeptidase domain IXO1088_006080 PF17092 Penicillin-binding protein OB-like domain IXO1088_006080 PF00912 Transglycosylase IXO1088_006105 PF11741 AMIN domain IXO1088_006105 PF00263 Bacterial type II and III secretion system protein IXO1088_006105 PF07660 Secretin and TonB N terminus short domain IXO1088_006105 PF03958 Bacterial type II/III secretion system short domain IXO1088_006120 PF07726 ATPase family associated with various cellular activities (AAA) IXO1088_006120 PF17863 AAA lid domain IXO1088_006140 PF07584 Aerotolerance regulator N-terminal IXO1088_006140 PF00092 von Willebrand factor type A domain IXO1088_006160 PF00375 Sodium:dicarboxylate symporter family IXO1088_006165 PF00456 Transketolase, thiamine diphosphate binding domain IXO1088_006165 PF02779 Transketolase, pyrimidine binding domain IXO1088_006165 PF02780 Transketolase, C-terminal domain IXO1088_006175 PF04225 Opacity-associated protein A LysM-like domain IXO1088_006175 PF01551 Peptidase family M23 IXO1088_006180 PF01476 LysM domain IXO1088_006180 PF03734 L,D-transpeptidase catalytic domain IXO1088_006205 PF00501 AMP-binding enzyme IXO1088_006225 PF00486 Transcriptional regulatory protein, C terminal IXO1088_006225 PF00072 Response regulator receiver domain IXO1088_006230 PF08521 Two-component sensor kinase N-terminal IXO1088_006230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_006230 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_006250 PF03459 TOBE domain IXO1088_006250 PF00005 ABC transporter IXO1088_006255 PF00528 Binding-protein-dependent transport system inner membrane component IXO1088_006265 PF04273 Putative phosphatase (DUF442) IXO1088_006265 PF00753 Metallo-beta-lactamase superfamily IXO1088_006300 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IXO1088_006300 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IXO1088_006320 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_006320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_006320 PF00672 HAMP domain IXO1088_006325 PF00486 Transcriptional regulatory protein, C terminal IXO1088_006325 PF00072 Response regulator receiver domain IXO1088_006340 PF08443 RimK-like ATP-grasp domain IXO1088_006340 PF18030 RimK PreATP-grasp domain IXO1088_006345 PF05598 Transposase domain (DUF772) IXO1088_006345 PF01609 Transposase DDE domain IXO1088_006380 PF00520 Ion transport protein IXO1088_006380 PF00027 Cyclic nucleotide-binding domain IXO1088_006385 PF00202 Aminotransferase class-III IXO1088_006415 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IXO1088_006415 PF00034 Cytochrome c IXO1088_006430 PF00127 Copper binding proteins, plastocyanin/azurin family IXO1088_006445 PF05598 Transposase domain (DUF772) IXO1088_006445 PF01609 Transposase DDE domain IXO1088_006450 PF00202 Aminotransferase class-III IXO1088_006465 PF13333 Integrase core domain IXO1088_006465 PF00665 Integrase core domain IXO1088_006465 PF13276 HTH-like domain IXO1088_006475 PF03377 TAL effector repeat IXO1088_006505 PF03377 TAL effector repeat IXO1088_006535 PF03377 TAL effector repeat IXO1088_006555 PF01208 Uroporphyrinogen decarboxylase (URO-D) IXO1088_006565 PF01761 3-dehydroquinate synthase IXO1088_006570 PF01202 Shikimate kinase IXO1088_006575 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IXO1088_006575 PF01243 Pyridoxamine 5'-phosphate oxidase IXO1088_006585 PF04012 PspA/IM30 family IXO1088_006610 PF03738 Glutathionylspermidine synthase preATP-grasp IXO1088_006625 PF09278 MerR, DNA binding IXO1088_006625 PF00376 MerR family regulatory protein IXO1088_006655 PF04820 Tryptophan halogenase IXO1088_006660 PF12706 Beta-lactamase superfamily domain IXO1088_006680 PF00324 Amino acid permease IXO1088_006685 PF00196 Bacterial regulatory proteins, luxR family IXO1088_006690 PF00561 alpha/beta hydrolase fold IXO1088_006700 PF00324 Amino acid permease IXO1088_006720 PF01654 Cytochrome bd terminal oxidase subunit I IXO1088_006725 PF02322 Cytochrome bd terminal oxidase subunit II IXO1088_006730 PF00756 Putative esterase IXO1088_006735 PF00571 CBS domain IXO1088_006735 PF01769 Divalent cation transporter IXO1088_006735 PF03448 MgtE intracellular N domain IXO1088_006745 PF05524 PEP-utilising enzyme, N-terminal IXO1088_006745 PF02896 PEP-utilising enzyme, TIM barrel domain IXO1088_006745 PF00391 PEP-utilising enzyme, mobile domain IXO1088_006750 PF00381 PTS HPr component phosphorylation site IXO1088_006760 PF03668 P-loop ATPase protein family IXO1088_006765 PF02603 HPr Serine kinase N terminus IXO1088_006765 PF07475 HPr Serine kinase C-terminal domain IXO1088_006770 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IXO1088_006775 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IXO1088_006780 PF04552 Sigma-54, DNA binding domain IXO1088_006780 PF04963 Sigma-54 factor, core binding domain IXO1088_006780 PF00309 Sigma-54 factor, Activator interacting domain (AID) IXO1088_006785 PF00005 ABC transporter IXO1088_006790 PF03968 OstA-like protein IXO1088_006805 PF00571 CBS domain IXO1088_006805 PF01380 SIS domain IXO1088_006810 PF01722 BolA-like protein IXO1088_006815 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IXO1088_006835 PF00551 Formyl transferase IXO1088_006850 PF00586 AIR synthase related protein, N-terminal domain IXO1088_006850 PF02769 AIR synthase related protein, C-terminal domain IXO1088_006860 PF01594 AI-2E family transporter IXO1088_006865 PF00308 Bacterial dnaA protein IXO1088_006870 PF00483 Nucleotidyl transferase IXO1088_006875 PF01636 Phosphotransferase enzyme family IXO1088_006890 PF07687 Peptidase dimerisation domain IXO1088_006890 PF01546 Peptidase family M20/M25/M40 IXO1088_006910 PF01609 Transposase DDE domain IXO1088_006910 PF05598 Transposase domain (DUF772) IXO1088_006940 PF06964 Alpha-L-arabinofuranosidase C-terminal domain IXO1088_006945 PF01263 Aldose 1-epimerase IXO1088_006950 PF01578 Cytochrome C assembly protein IXO1088_006965 PF00448 SRP54-type protein, GTPase domain IXO1088_006965 PF02881 SRP54-type protein, helical bundle domain IXO1088_006965 PF02978 Signal peptide binding domain IXO1088_006980 PF03060 Nitronate monooxygenase IXO1088_006990 PF00886 Ribosomal protein S16 IXO1088_006995 PF05239 PRC-barrel domain IXO1088_006995 PF01782 RimM N-terminal domain IXO1088_007000 PF01746 tRNA (Guanine-1)-methyltransferase IXO1088_007005 PF01245 Ribosomal protein L19 IXO1088_007015 PF01554 MatE IXO1088_007020 PF01479 S4 domain IXO1088_007055 PF01541 GIY-YIG catalytic domain IXO1088_007060 PF07724 AAA domain (Cdc48 subfamily) IXO1088_007060 PF10431 C-terminal, D2-small domain, of ClpB protein IXO1088_007060 PF02861 Clp amino terminal domain, pathogenicity island component IXO1088_007060 PF17871 AAA lid domain IXO1088_007060 PF00004 ATPase family associated with various cellular activities (AAA) IXO1088_007100 PF07715 TonB-dependent Receptor Plug Domain IXO1088_007100 PF00593 TonB dependent receptor IXO1088_007125 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP IXO1088_007125 PF12557 Cob(I)alamin adenosyltransferase N terminal IXO1088_007135 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase IXO1088_007140 PF02277 Phosphoribosyltransferase IXO1088_007150 PF02654 Cobalamin-5-phosphate synthase IXO1088_007165 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IXO1088_007165 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IXO1088_007175 PF07690 Major Facilitator Superfamily IXO1088_007180 PF04183 IucA / IucC family IXO1088_007180 PF06276 Ferric iron reductase FhuF-like transporter IXO1088_007190 PF00593 TonB dependent receptor IXO1088_007190 PF07660 Secretin and TonB N terminus short domain IXO1088_007190 PF07715 TonB-dependent Receptor Plug Domain IXO1088_007205 PF00999 Sodium/hydrogen exchanger family IXO1088_007205 PF02254 TrkA-N domain IXO1088_007215 PF00593 TonB dependent receptor IXO1088_007215 PF07715 TonB-dependent Receptor Plug Domain IXO1088_007220 PF00593 TonB dependent receptor IXO1088_007220 PF07715 TonB-dependent Receptor Plug Domain IXO1088_007225 PF00593 TonB dependent receptor IXO1088_007225 PF07715 TonB-dependent Receptor Plug Domain IXO1088_007230 PF00005 ABC transporter IXO1088_007230 PF12848 ABC transporter IXO1088_007245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO1088_007245 PF03466 LysR substrate binding domain IXO1088_007255 PF13472 GDSL-like Lipase/Acylhydrolase family IXO1088_007255 PF07859 alpha/beta hydrolase fold IXO1088_007280 PF12833 Helix-turn-helix domain IXO1088_007285 PF00183 Hsp90 protein IXO1088_007285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_007315 PF00872 Transposase, Mutator family IXO1088_007320 PF00120 Glutamine synthetase, catalytic domain IXO1088_007325 PF04204 Homoserine O-succinyltransferase IXO1088_007330 PF01810 LysE type translocator IXO1088_007335 PF07722 Peptidase C26 IXO1088_007345 PF01053 Cys/Met metabolism PLP-dependent enzyme IXO1088_007350 PF00266 Aminotransferase class-V IXO1088_007385 PF00355 Rieske [2Fe-2S] domain IXO1088_007400 PF00266 Aminotransferase class-V IXO1088_007405 PF01458 Uncharacterized protein family (UPF0051) IXO1088_007410 PF00005 ABC transporter IXO1088_007415 PF01458 Uncharacterized protein family (UPF0051) IXO1088_007420 PF02082 Transcriptional regulator IXO1088_007440 PF01965 DJ-1/PfpI family IXO1088_007475 PF14748 Pyrroline-5-carboxylate reductase dimerisation IXO1088_007475 PF03807 NADP oxidoreductase coenzyme F420-dependent IXO1088_007480 PF01168 Alanine racemase, N-terminal domain IXO1088_007485 PF00437 Type II/IV secretion system protein IXO1088_007490 PF00437 Type II/IV secretion system protein IXO1088_007515 PF03352 Methyladenine glycosylase IXO1088_007515 PF13302 Acetyltransferase (GNAT) domain IXO1088_007515 PF13673 Acetyltransferase (GNAT) domain IXO1088_007515 PF00117 Glutamine amidotransferase class-I IXO1088_007515 PF00958 GMP synthase C terminal domain IXO1088_007525 PF02622 Uncharacterized ACR, COG1678 IXO1088_007530 PF03652 Holliday junction resolvase IXO1088_007535 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IXO1088_007535 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IXO1088_007545 PF02566 OsmC-like protein IXO1088_007555 PF02567 Phenazine biosynthesis-like protein IXO1088_007565 PF01842 ACT domain IXO1088_007565 PF00696 Amino acid kinase family IXO1088_007580 PF08245 Mur ligase middle domain IXO1088_007595 PF00348 Polyprenyl synthetase IXO1088_007600 PF00436 Single-strand binding protein family IXO1088_007660 PF04328 Selenoprotein, putative IXO1088_007665 PF02554 Carbon starvation protein CstA IXO1088_007665 PF13722 5TM C-terminal transporter carbon starvation CstA IXO1088_007670 PF02678 Pirin IXO1088_007670 PF05726 Pirin C-terminal cupin domain IXO1088_007680 PF04717 Type VI secretion system, phage-baseplate injector IXO1088_007725 PF00182 Chitinase class I IXO1088_007730 PF16671 Actin cross-linking domain IXO1088_007730 PF04717 Type VI secretion system, phage-baseplate injector IXO1088_007740 PF00872 Transposase, Mutator family IXO1088_007760 PF00182 Chitinase class I IXO1088_007800 PF16671 Actin cross-linking domain IXO1088_007800 PF04717 Type VI secretion system, phage-baseplate injector IXO1088_007855 PF00004 ATPase family associated with various cellular activities (AAA) IXO1088_007855 PF17871 AAA lid domain IXO1088_007855 PF10431 C-terminal, D2-small domain, of ClpB protein IXO1088_007855 PF07724 AAA domain (Cdc48 subfamily) IXO1088_007865 PF04717 Type VI secretion system, phage-baseplate injector IXO1088_007865 PF16671 Actin cross-linking domain IXO1088_007955 PF01420 Type I restriction modification DNA specificity domain IXO1088_007965 PF02384 N-6 DNA Methylase IXO1088_007975 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) IXO1088_007975 PF04851 Type III restriction enzyme, res subunit IXO1088_007975 PF00271 Helicase conserved C-terminal domain IXO1088_007975 PF08463 EcoEI R protein C-terminal IXO1088_007990 PF00271 Helicase conserved C-terminal domain IXO1088_007990 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) IXO1088_007990 PF08463 EcoEI R protein C-terminal IXO1088_007990 PF04851 Type III restriction enzyme, res subunit IXO1088_008005 PF12161 HsdM N-terminal domain IXO1088_008005 PF02384 N-6 DNA Methylase IXO1088_008010 PF01420 Type I restriction modification DNA specificity domain IXO1088_008060 PF13456 Reverse transcriptase-like IXO1088_008060 PF00300 Histidine phosphatase superfamily (branch 1) IXO1088_008085 PF00717 Peptidase S24-like IXO1088_008085 PF01726 LexA DNA binding domain IXO1088_008105 PF02811 PHP domain IXO1088_008105 PF14579 Helix-hairpin-helix motif IXO1088_008105 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IXO1088_008105 PF07733 Bacterial DNA polymerase III alpha NTPase domain IXO1088_008125 PF03169 OPT oligopeptide transporter protein IXO1088_008150 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region IXO1088_008150 PF07676 WD40-like Beta Propeller Repeat IXO1088_008150 PF00326 Prolyl oligopeptidase family IXO1088_008170 PF02311 AraC-like ligand binding domain IXO1088_008170 PF12833 Helix-turn-helix domain IXO1088_008200 PF00199 Catalase IXO1088_008200 PF06628 Catalase-related immune-responsive IXO1088_008200 PF18011 C-terminal domain found in long catalases IXO1088_008235 PF00162 Phosphoglycerate kinase IXO1088_008245 PF00224 Pyruvate kinase, barrel domain IXO1088_008245 PF02887 Pyruvate kinase, alpha/beta domain IXO1088_008255 PF00274 Fructose-bisphosphate aldolase class-I IXO1088_008260 PF01661 Macro domain IXO1088_008270 PF00291 Pyridoxal-phosphate dependent enzyme IXO1088_008275 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IXO1088_008275 PF10414 Sirohaem synthase dimerisation region IXO1088_008275 PF14824 Sirohaem biosynthesis protein central IXO1088_008280 PF03466 LysR substrate binding domain IXO1088_008280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO1088_008310 PF00072 Response regulator receiver domain IXO1088_008310 PF01627 Hpt domain IXO1088_008310 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_008310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_008310 PF00672 HAMP domain IXO1088_008330 PF01507 Phosphoadenosine phosphosulfate reductase family IXO1088_008335 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IXO1088_008335 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IXO1088_008340 PF00258 Flavodoxin IXO1088_008340 PF00175 Oxidoreductase NAD-binding domain IXO1088_008340 PF00667 FAD binding domain IXO1088_008345 PF01507 Phosphoadenosine phosphosulfate reductase family IXO1088_008350 PF00009 Elongation factor Tu GTP binding domain IXO1088_008360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IXO1088_008360 PF00529 HlyD membrane-fusion protein of T1SS IXO1088_008365 PF00873 AcrB/AcrD/AcrF family IXO1088_008370 PF01433 Peptidase family M1 domain IXO1088_008370 PF11838 ERAP1-like C-terminal domain IXO1088_008400 PF00588 SpoU rRNA Methylase family IXO1088_008400 PF08032 RNA 2'-O ribose methyltransferase substrate binding IXO1088_008425 PF01741 Large-conductance mechanosensitive channel, MscL IXO1088_008430 PF01557 Fumarylacetoacetate (FAA) hydrolase family IXO1088_008455 PF03600 Citrate transporter IXO1088_008455 PF02080 TrkA-C domain IXO1088_008460 PF02390 Putative methyltransferase IXO1088_008470 PF05690 Thiazole biosynthesis protein ThiG IXO1088_008485 PF00657 GDSL-like Lipase/Acylhydrolase IXO1088_008485 PF03797 Autotransporter beta-domain IXO1088_008570 PF05190 MutS family domain IV IXO1088_008570 PF00488 MutS domain V IXO1088_008570 PF05188 MutS domain II IXO1088_008570 PF05192 MutS domain III IXO1088_008570 PF01624 MutS domain I IXO1088_008595 PF18073 Rubredoxin metal binding domain IXO1088_008635 PF00152 tRNA synthetases class II (D, K and N) IXO1088_008635 PF02938 GAD domain IXO1088_008635 PF01336 OB-fold nucleic acid binding domain IXO1088_008655 PF01709 Transcriptional regulator IXO1088_008660 PF02075 Crossover junction endodeoxyribonuclease RuvC IXO1088_008665 PF07499 RuvA, C-terminal domain IXO1088_008665 PF01330 RuvA N terminal domain IXO1088_008670 PF02705 K+ potassium transporter IXO1088_008675 PF17864 RuvB AAA lid domain IXO1088_008675 PF05491 RuvB C-terminal winged helix domain IXO1088_008675 PF05496 Holliday junction DNA helicase RuvB P-loop domain IXO1088_008680 PF03061 Thioesterase superfamily IXO1088_008685 PF01618 MotA/TolQ/ExbB proton channel family IXO1088_008690 PF02472 Biopolymer transport protein ExbD/TolR IXO1088_008700 PF04052 TolB amino-terminal domain IXO1088_008700 PF07676 WD40-like Beta Propeller Repeat IXO1088_008705 PF00691 OmpA family IXO1088_008715 PF04055 Radical SAM superfamily IXO1088_008740 PF06508 Queuosine biosynthesis protein QueC IXO1088_008765 PF09382 RQC domain IXO1088_008765 PF00570 HRDC domain IXO1088_008765 PF00271 Helicase conserved C-terminal domain IXO1088_008765 PF16124 RecQ zinc-binding IXO1088_008765 PF00270 DEAD/DEAH box helicase IXO1088_008770 PF00210 Ferritin-like domain IXO1088_008775 PF04408 Helicase associated domain (HA2) IXO1088_008775 PF11898 Domain of unknown function (DUF3418) IXO1088_008775 PF00270 DEAD/DEAH box helicase IXO1088_008775 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold IXO1088_008775 PF00271 Helicase conserved C-terminal domain IXO1088_008800 PF04055 Radical SAM superfamily IXO1088_008800 PF13186 Iron-sulfur cluster-binding domain IXO1088_008805 PF05402 Coenzyme PQQ synthesis protein D (PqqD) IXO1088_008810 PF03070 TENA/THI-4/PQQC family IXO1088_008815 PF12706 Beta-lactamase superfamily domain IXO1088_008820 PF08042 PqqA family IXO1088_008825 PF02824 TGS domain IXO1088_008825 PF04607 Region found in RelA / SpoT proteins IXO1088_008825 PF13291 ACT domain IXO1088_008835 PF00535 Glycosyl transferase family 2 IXO1088_008840 PF00905 Penicillin binding protein transpeptidase domain IXO1088_008840 PF14814 Bifunctional transglycosylase second domain IXO1088_008840 PF00912 Transglycosylase IXO1088_008850 PF04851 Type III restriction enzyme, res subunit IXO1088_008850 PF13307 Helicase C-terminal domain IXO1088_008855 PF00814 Glycoprotease family IXO1088_008860 PF03747 ADP-ribosylglycohydrolase IXO1088_008870 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain IXO1088_008870 PF02951 Prokaryotic glutathione synthetase, N-terminal domain IXO1088_008875 PF00072 Response regulator receiver domain IXO1088_008880 PF00072 Response regulator receiver domain IXO1088_008885 PF01584 CheW-like domain IXO1088_008890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXO1088_008890 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term IXO1088_008895 PF00072 Response regulator receiver domain IXO1088_008895 PF02895 Signal transducing histidine kinase, homodimeric domain IXO1088_008895 PF01584 CheW-like domain IXO1088_008895 PF01627 Hpt domain IXO1088_008895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_008910 PF13302 Acetyltransferase (GNAT) domain IXO1088_008945 PF01112 Asparaginase IXO1088_008950 PF03932 CutC family IXO1088_008990 PF01301 Glycosyl hydrolases family 35 IXO1088_009000 PF17678 Glycosyl hydrolase family 92 N-terminal domain IXO1088_009000 PF07971 Glycosyl hydrolase family 92 IXO1088_009060 PF00664 ABC transporter transmembrane region IXO1088_009060 PF00005 ABC transporter IXO1088_009060 PF03412 Peptidase C39 family IXO1088_009065 PF00933 Glycosyl hydrolase family 3 N terminal domain IXO1088_009065 PF01915 Glycosyl hydrolase family 3 C-terminal domain IXO1088_009065 PF07691 PA14 domain IXO1088_009065 PF14310 Fibronectin type III-like domain IXO1088_009085 PF00704 Glycosyl hydrolases family 18 IXO1088_009085 PF01476 LysM domain IXO1088_009100 PF02685 Glucokinase IXO1088_009105 PF04452 RNA methyltransferase IXO1088_009110 PF00202 Aminotransferase class-III IXO1088_009115 PF00293 NUDIX domain IXO1088_009120 PF00459 Inositol monophosphatase family IXO1088_009125 PF03819 MazG nucleotide pyrophosphohydrolase domain IXO1088_009140 PF01145 SPFH domain / Band 7 family IXO1088_009140 PF16200 C-terminal region of band_7 IXO1088_009150 PF08669 Glycine cleavage T-protein C-terminal barrel domain IXO1088_009150 PF01571 Aminomethyltransferase folate-binding domain IXO1088_009155 PF01597 Glycine cleavage H-protein IXO1088_009190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IXO1088_009190 PF09317 Domain of unknown function (DUF1974) IXO1088_009190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IXO1088_009200 PF00440 Bacterial regulatory proteins, tetR family IXO1088_009205 PF00593 TonB dependent receptor IXO1088_009205 PF07715 TonB-dependent Receptor Plug Domain IXO1088_009215 PF01430 Hsp33 protein IXO1088_009220 PF00912 Transglycosylase IXO1088_009225 PF00535 Glycosyl transferase family 2 IXO1088_009245 PF03006 Haemolysin-III related IXO1088_009250 PF16658 Class II release factor RF3, C-terminal domain IXO1088_009250 PF00009 Elongation factor Tu GTP binding domain IXO1088_009255 PF01551 Peptidase family M23 IXO1088_009255 PF01476 LysM domain IXO1088_009255 PF08525 Opacity-associated protein A N-terminal motif IXO1088_009260 PF00561 alpha/beta hydrolase fold IXO1088_009265 PF01053 Cys/Met metabolism PLP-dependent enzyme IXO1088_009275 PF03313 Serine dehydratase alpha chain IXO1088_009275 PF03315 Serine dehydratase beta chain IXO1088_009290 PF04264 YceI-like domain IXO1088_009300 PF04264 YceI-like domain IXO1088_009305 PF17149 Periplasmic sensor domain found in signal transduction proteins IXO1088_009305 PF00072 Response regulator receiver domain IXO1088_009305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_009305 PF01627 Hpt domain IXO1088_009305 PF00672 HAMP domain IXO1088_009305 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_009310 PF17149 Periplasmic sensor domain found in signal transduction proteins IXO1088_009310 PF00672 HAMP domain IXO1088_009310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_009310 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_009310 PF00072 Response regulator receiver domain IXO1088_009310 PF01627 Hpt domain IXO1088_009315 PF01627 Hpt domain IXO1088_009315 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_009315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_009315 PF00672 HAMP domain IXO1088_009315 PF17149 Periplasmic sensor domain found in signal transduction proteins IXO1088_009315 PF00072 Response regulator receiver domain IXO1088_009360 PF09856 Predicted transcriptional regulator (DUF2083) IXO1088_009360 PF01381 Helix-turn-helix IXO1088_009360 PF06114 IrrE N-terminal-like domain IXO1088_009365 PF00171 Aldehyde dehydrogenase family IXO1088_009370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IXO1088_009370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IXO1088_009370 PF02770 Acyl-CoA dehydrogenase, middle domain IXO1088_009375 PF00378 Enoyl-CoA hydratase/isomerase IXO1088_009380 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IXO1088_009380 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IXO1088_009380 PF00378 Enoyl-CoA hydratase/isomerase IXO1088_009385 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IXO1088_009385 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IXO1088_009390 PF01545 Cation efflux family IXO1088_009395 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IXO1088_009395 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IXO1088_009395 PF00378 Enoyl-CoA hydratase/isomerase IXO1088_009400 PF04542 Sigma-70 region 2 IXO1088_009400 PF08281 Sigma-70, region 4 IXO1088_009410 PF13180 PDZ domain IXO1088_009415 PF06421 GTP-binding protein LepA C-terminus IXO1088_009415 PF00679 Elongation factor G C-terminus IXO1088_009415 PF03144 Elongation factor Tu domain 2 IXO1088_009415 PF00009 Elongation factor Tu GTP binding domain IXO1088_009420 PF10502 Signal peptidase, peptidase S26 IXO1088_009430 PF00035 Double-stranded RNA binding motif IXO1088_009430 PF14622 Ribonuclease-III-like IXO1088_009435 PF01926 50S ribosome-binding GTPase IXO1088_009435 PF07650 KH domain IXO1088_009440 PF02565 Recombination protein O C terminal IXO1088_009440 PF11967 Recombination protein O N terminal IXO1088_009450 PF05958 tRNA (Uracil-5-)-methyltransferase IXO1088_009455 PF01928 CYTH domain IXO1088_009465 PF05598 Transposase domain (DUF772) IXO1088_009470 PF01323 DSBA-like thioredoxin domain IXO1088_009475 PF01593 Flavin containing amine oxidoreductase IXO1088_009480 PF04244 Deoxyribodipyrimidine photo-lyase-related protein IXO1088_009485 PF00933 Glycosyl hydrolase family 3 N terminal domain IXO1088_009495 PF01048 Phosphorylase superfamily IXO1088_009500 PF00313 'Cold-shock' DNA-binding domain IXO1088_009520 PF00271 Helicase conserved C-terminal domain IXO1088_009520 PF08494 DEAD/H associated IXO1088_009520 PF00270 DEAD/DEAH box helicase IXO1088_009525 PF01068 ATP dependent DNA ligase domain IXO1088_009525 PF04679 ATP dependent DNA ligase C terminal region IXO1088_009525 PF04675 DNA ligase N terminus IXO1088_009535 PF04675 DNA ligase N terminus IXO1088_009535 PF01068 ATP dependent DNA ligase domain IXO1088_009535 PF04679 ATP dependent DNA ligase C terminal region IXO1088_009550 PF00990 Diguanylate cyclase, GGDEF domain IXO1088_009550 PF00072 Response regulator receiver domain IXO1088_009565 PF02803 Thiolase, C-terminal domain IXO1088_009565 PF00108 Thiolase, N-terminal domain IXO1088_009570 PF12951 Passenger-associated-transport-repeat IXO1088_009570 PF00082 Subtilase family IXO1088_009570 PF03797 Autotransporter beta-domain IXO1088_009575 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IXO1088_009575 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IXO1088_009590 PF01863 Protein of unknown function DUF45 IXO1088_009595 PF07043 Protein of unknown function (DUF1328) IXO1088_009610 PF05598 Transposase domain (DUF772) IXO1088_009610 PF01609 Transposase DDE domain IXO1088_009615 PF01258 Prokaryotic dksA/traR C4-type zinc finger IXO1088_009675 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IXO1088_009690 PF03831 PhnA domain IXO1088_009690 PF08274 PhnA Zinc-Ribbon IXO1088_009705 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IXO1088_009710 PF07690 Major Facilitator Superfamily IXO1088_009755 PF09924 Uncharacterised conserved protein (DUF2156) IXO1088_009755 PF03706 Lysylphosphatidylglycerol synthase TM region IXO1088_009765 PF01042 Endoribonuclease L-PSP IXO1088_009810 PF04545 Sigma-70, region 4 IXO1088_009810 PF04542 Sigma-70 region 2 IXO1088_009830 PF04060 Putative Fe-S cluster IXO1088_009840 PF01588 Putative tRNA binding domain IXO1088_009840 PF09334 tRNA synthetases class I (M) IXO1088_009860 PF00324 Amino acid permease IXO1088_009865 PF02574 Homocysteine S-methyltransferase IXO1088_009880 PF02592 Putative vitamin uptake transporter IXO1088_009895 PF05598 Transposase domain (DUF772) IXO1088_009920 PF00009 Elongation factor Tu GTP binding domain IXO1088_009990 PF00005 ABC transporter IXO1088_009995 PF00593 TonB dependent receptor IXO1088_009995 PF07715 TonB-dependent Receptor Plug Domain IXO1088_010005 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IXO1088_010010 PF14579 Helix-hairpin-helix motif IXO1088_010010 PF07733 Bacterial DNA polymerase III alpha NTPase domain IXO1088_010010 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IXO1088_010010 PF02811 PHP domain IXO1088_010010 PF01336 OB-fold nucleic acid binding domain IXO1088_010015 PF01351 Ribonuclease HII IXO1088_010020 PF02684 Lipid-A-disaccharide synthetase IXO1088_010025 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 IXO1088_010025 PF00132 Bacterial transferase hexapeptide (six repeats) IXO1088_010030 PF07977 FabA-like domain IXO1088_010035 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD IXO1088_010035 PF00132 Bacterial transferase hexapeptide (six repeats) IXO1088_010050 PF01103 Surface antigen IXO1088_010050 PF07244 Surface antigen variable number repeat IXO1088_010055 PF17820 PDZ domain IXO1088_010055 PF02163 Peptidase family M50 IXO1088_010060 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IXO1088_010060 PF13288 DXP reductoisomerase C-terminal domain IXO1088_010060 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain IXO1088_010070 PF01255 Putative undecaprenyl diphosphate synthase IXO1088_010075 PF01765 Ribosome recycling factor IXO1088_010080 PF00696 Amino acid kinase family IXO1088_010090 PF00889 Elongation factor TS IXO1088_010095 PF00318 Ribosomal protein S2 IXO1088_010130 PF00557 Metallopeptidase family M24 IXO1088_010135 PF01966 HD domain IXO1088_010135 PF01909 Nucleotidyltransferase domain IXO1088_010135 PF08335 GlnD PII-uridylyltransferase IXO1088_010140 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal IXO1088_010140 PF14602 Hexapeptide repeat of succinyl-transferase IXO1088_010140 PF00132 Bacterial transferase hexapeptide (six repeats) IXO1088_010150 PF03960 ArsC family IXO1088_010160 PF07687 Peptidase dimerisation domain IXO1088_010160 PF01546 Peptidase family M20/M25/M40 IXO1088_010165 PF00733 Asparagine synthase IXO1088_010165 PF13537 Glutamine amidotransferase domain IXO1088_010175 PF07715 TonB-dependent Receptor Plug Domain IXO1088_010175 PF00593 TonB dependent receptor IXO1088_010190 PF01804 Penicillin amidase IXO1088_010195 PF00210 Ferritin-like domain IXO1088_010205 PF00521 DNA gyrase/topoisomerase IV, subunit A IXO1088_010205 PF03989 DNA gyrase C-terminal domain, beta-propeller IXO1088_010210 PF12833 Helix-turn-helix domain IXO1088_010220 PF02321 Outer membrane efflux protein IXO1088_010225 PF00529 HlyD membrane-fusion protein of T1SS IXO1088_010225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IXO1088_010230 PF07690 Major Facilitator Superfamily IXO1088_010275 PF02780 Transketolase, C-terminal domain IXO1088_010275 PF02779 Transketolase, pyrimidine binding domain IXO1088_010275 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IXO1088_010285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IXO1088_010285 PF12806 Acetyl-CoA dehydrogenase C-terminal like IXO1088_010285 PF02770 Acyl-CoA dehydrogenase, middle domain IXO1088_010285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IXO1088_010300 PF01668 SmpB protein IXO1088_010305 PF03364 Polyketide cyclase / dehydrase and lipid transport IXO1088_010310 PF03658 RnfH family Ubiquitin IXO1088_010320 PF04355 SmpA / OmlA family IXO1088_010325 PF01475 Ferric uptake regulator family IXO1088_010330 PF02463 RecF/RecN/SMC N terminal domain IXO1088_010335 PF01628 HrcA protein C terminal domain IXO1088_010335 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding IXO1088_010340 PF01025 GrpE IXO1088_010345 PF00012 Hsp70 protein IXO1088_010350 PF00226 DnaJ domain IXO1088_010350 PF01556 DnaJ C terminal domain IXO1088_010350 PF00684 DnaJ central domain IXO1088_010360 PF08543 Phosphomethylpyrimidine kinase IXO1088_010380 PF03466 LysR substrate binding domain IXO1088_010380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO1088_010395 PF00664 ABC transporter transmembrane region IXO1088_010395 PF00005 ABC transporter IXO1088_010400 PF01205 Uncharacterized protein family UPF0029 IXO1088_010405 PF03641 Possible lysine decarboxylase IXO1088_010410 PF07992 Pyridine nucleotide-disulphide oxidoreductase IXO1088_010410 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IXO1088_010415 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IXO1088_010415 PF00364 Biotin-requiring enzyme IXO1088_010415 PF02817 e3 binding domain IXO1088_010420 PF16078 2-oxoglutarate dehydrogenase N-terminus IXO1088_010420 PF16870 2-oxoglutarate dehydrogenase C-terminal IXO1088_010420 PF02779 Transketolase, pyrimidine binding domain IXO1088_010420 PF00676 Dehydrogenase E1 component IXO1088_010430 PF08007 Cupin superfamily protein IXO1088_010450 PF08328 Adenylosuccinate lyase C-terminal IXO1088_010450 PF00206 Lyase IXO1088_010480 PF00206 Lyase IXO1088_010480 PF10415 Fumarase C C-terminus IXO1088_010510 PF00005 ABC transporter IXO1088_010515 PF00392 Bacterial regulatory proteins, gntR family IXO1088_010525 PF00255 Glutathione peroxidase IXO1088_010530 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IXO1088_010530 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IXO1088_010535 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IXO1088_010535 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IXO1088_010535 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IXO1088_010540 PF04102 SlyX IXO1088_010560 PF07690 Major Facilitator Superfamily IXO1088_010565 PF00294 pfkB family carbohydrate kinase IXO1088_010580 PF02607 B12 binding domain IXO1088_010580 PF02965 Vitamin B12 dependent methionine synthase, activation domain IXO1088_010580 PF00809 Pterin binding enzyme IXO1088_010580 PF02574 Homocysteine S-methyltransferase IXO1088_010580 PF02310 B12 binding domain IXO1088_010585 PF00809 Pterin binding enzyme IXO1088_010585 PF02574 Homocysteine S-methyltransferase IXO1088_010590 PF01209 ubiE/COQ5 methyltransferase family IXO1088_010595 PF02770 Acyl-CoA dehydrogenase, middle domain IXO1088_010595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IXO1088_010595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IXO1088_010625 PF00575 S1 RNA binding domain IXO1088_010625 PF08461 Ribonuclease R winged-helix domain IXO1088_010625 PF08206 Ribonuclease B OB domain IXO1088_010625 PF17876 Cold shock domain IXO1088_010625 PF00773 RNB domain IXO1088_010640 PF00588 SpoU rRNA Methylase family IXO1088_010640 PF08032 RNA 2'-O ribose methyltransferase substrate binding IXO1088_010655 PF05598 Transposase domain (DUF772) IXO1088_010655 PF01609 Transposase DDE domain IXO1088_010685 PF00313 'Cold-shock' DNA-binding domain IXO1088_010690 PF00561 alpha/beta hydrolase fold IXO1088_010745 PF03544 Gram-negative bacterial TonB protein C-terminal IXO1088_010750 PF02403 Seryl-tRNA synthetase N-terminal domain IXO1088_010750 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IXO1088_010770 PF01609 Transposase DDE domain IXO1088_010770 PF05598 Transposase domain (DUF772) IXO1088_010775 PF02525 Flavodoxin-like fold IXO1088_010780 PF03466 LysR substrate binding domain IXO1088_010780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO1088_010800 PF03377 TAL effector repeat IXO1088_010815 PF03377 TAL effector repeat IXO1088_010835 PF03377 TAL effector repeat IXO1088_010850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_010850 PF00183 Hsp90 protein IXO1088_010860 PF01467 Cytidylyltransferase-like IXO1088_010875 PF00037 4Fe-4S binding domain IXO1088_010960 PF04717 Type VI secretion system, phage-baseplate injector IXO1088_010960 PF16671 Actin cross-linking domain IXO1088_010980 PF04717 Type VI secretion system, phage-baseplate injector IXO1088_010980 PF16671 Actin cross-linking domain IXO1088_011005 PF01609 Transposase DDE domain IXO1088_011005 PF05598 Transposase domain (DUF772) IXO1088_011040 PF02547 Queuosine biosynthesis protein IXO1088_011045 PF01702 Queuine tRNA-ribosyltransferase IXO1088_011050 PF02699 Preprotein translocase subunit IXO1088_011055 PF02355 Protein export membrane protein IXO1088_011055 PF13721 SecD export protein N-terminal TM region IXO1088_011055 PF07549 SecD/SecF GG Motif IXO1088_011060 PF07549 SecD/SecF GG Motif IXO1088_011060 PF02355 Protein export membrane protein IXO1088_011065 PF00589 Phage integrase family IXO1088_011065 PF13495 Phage integrase, N-terminal SAM-like domain IXO1088_011090 PF00872 Transposase, Mutator family IXO1088_011105 PF00929 Exonuclease IXO1088_011115 PF01895 PhoU domain IXO1088_011120 PF00005 ABC transporter IXO1088_011125 PF00528 Binding-protein-dependent transport system inner membrane component IXO1088_011130 PF00528 Binding-protein-dependent transport system inner membrane component IXO1088_011135 PF12849 PBP superfamily domain IXO1088_011140 PF12849 PBP superfamily domain IXO1088_011160 PF00484 Carbonic anhydrase IXO1088_011170 PF00633 Helix-hairpin-helix motif IXO1088_011170 PF10576 Iron-sulfur binding domain of endonuclease III IXO1088_011170 PF00730 HhH-GPD superfamily base excision DNA repair protein IXO1088_011180 PF00378 Enoyl-CoA hydratase/isomerase IXO1088_011185 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IXO1088_011185 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IXO1088_011190 PF00293 NUDIX domain IXO1088_011195 PF00581 Rhodanese-like domain IXO1088_011235 PF01170 Putative RNA methylase family UPF0020 IXO1088_011235 PF10672 S-adenosylmethionine-dependent methyltransferase IXO1088_011235 PF02926 THUMP domain IXO1088_011245 PF01513 ATP-NAD kinase IXO1088_011260 PF00248 Aldo/keto reductase family IXO1088_011270 PF00929 Exonuclease IXO1088_011270 PF08411 Exonuclease C-terminal IXO1088_011275 PF01494 FAD binding domain IXO1088_011280 PF00266 Aminotransferase class-V IXO1088_011295 PF06052 3-hydroxyanthranilic acid dioxygenase IXO1088_011300 PF00484 Carbonic anhydrase IXO1088_011325 PF00152 tRNA synthetases class II (D, K and N) IXO1088_011325 PF01336 OB-fold nucleic acid binding domain IXO1088_011335 PF01521 Iron-sulphur cluster biosynthesis IXO1088_011340 PF01250 Ribosomal protein S6 IXO1088_011345 PF01084 Ribosomal protein S18 IXO1088_011350 PF01281 Ribosomal protein L9, N-terminal domain IXO1088_011350 PF03948 Ribosomal protein L9, C-terminal domain IXO1088_011355 PF02463 RecF/RecN/SMC N terminal domain IXO1088_011360 PF04354 ZipA, C-terminal FtsZ-binding domain IXO1088_011370 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IXO1088_011370 PF03120 NAD-dependent DNA ligase OB-fold domain IXO1088_011370 PF12826 Helix-hairpin-helix motif IXO1088_011370 PF00533 BRCA1 C Terminus (BRCT) domain IXO1088_011370 PF01653 NAD-dependent DNA ligase adenylation domain IXO1088_011375 PF00152 tRNA synthetases class II (D, K and N) IXO1088_011390 PF01008 Initiation factor 2 subunit family IXO1088_011395 PF03989 DNA gyrase C-terminal domain, beta-propeller IXO1088_011395 PF00521 DNA gyrase/topoisomerase IV, subunit A IXO1088_011415 PF17391 Urocanase N-terminal domain IXO1088_011415 PF17392 Urocanase C-terminal domain IXO1088_011415 PF01175 Urocanase Rossmann-like domain IXO1088_011425 PF00221 Aromatic amino acid lyase IXO1088_011430 PF07969 Amidohydrolase family IXO1088_011440 PF07702 UTRA domain IXO1088_011440 PF00392 Bacterial regulatory proteins, gntR family IXO1088_011465 PF01794 Ferric reductase like transmembrane component IXO1088_011475 PF00174 Oxidoreductase molybdopterin binding domain IXO1088_011480 PF00266 Aminotransferase class-V IXO1088_011485 PF00800 Prephenate dehydratase IXO1088_011485 PF01817 Chorismate mutase type II IXO1088_011485 PF01842 ACT domain IXO1088_011490 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IXO1088_011515 PF12951 Passenger-associated-transport-repeat IXO1088_011520 PF00196 Bacterial regulatory proteins, luxR family IXO1088_011520 PF00072 Response regulator receiver domain IXO1088_011525 PF13426 PAS domain IXO1088_011525 PF00072 Response regulator receiver domain IXO1088_011525 PF08448 PAS fold IXO1088_011525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_011525 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_011530 PF02321 Outer membrane efflux protein IXO1088_011535 PF00873 AcrB/AcrD/AcrF family IXO1088_011540 PF13533 Biotin-lipoyl like IXO1088_011550 PF00082 Subtilase family IXO1088_011550 PF03797 Autotransporter beta-domain IXO1088_011555 PF05598 Transposase domain (DUF772) IXO1088_011575 PF01520 N-acetylmuramoyl-L-alanine amidase IXO1088_011580 PF02649 Type I GTP cyclohydrolase folE2 IXO1088_011590 PF01743 Poly A polymerase head domain IXO1088_011590 PF12627 Probable RNA and SrmB- binding site of polymerase A IXO1088_011590 PF12626 Polymerase A arginine-rich C-terminus IXO1088_011595 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IXO1088_011600 PF02548 Ketopantoate hydroxymethyltransferase IXO1088_011605 PF02569 Pantoate-beta-alanine ligase IXO1088_011610 PF02261 Aspartate decarboxylase IXO1088_011615 PF00342 Phosphoglucose isomerase IXO1088_011640 PF14310 Fibronectin type III-like domain IXO1088_011640 PF00933 Glycosyl hydrolase family 3 N terminal domain IXO1088_011640 PF01915 Glycosyl hydrolase family 3 C-terminal domain IXO1088_011650 PF00474 Sodium:solute symporter family IXO1088_011660 PF00563 EAL domain IXO1088_011660 PF01590 GAF domain IXO1088_011660 PF00990 Diguanylate cyclase, GGDEF domain IXO1088_011660 PF00360 Phytochrome region IXO1088_011675 PF14310 Fibronectin type III-like domain IXO1088_011675 PF01915 Glycosyl hydrolase family 3 C-terminal domain IXO1088_011675 PF00933 Glycosyl hydrolase family 3 N terminal domain IXO1088_011710 PF12802 MarR family IXO1088_011720 PF04542 Sigma-70 region 2 IXO1088_011720 PF08281 Sigma-70, region 4 IXO1088_011750 PF00255 Glutathione peroxidase IXO1088_011755 PF00175 Oxidoreductase NAD-binding domain IXO1088_011755 PF00970 Oxidoreductase FAD-binding domain IXO1088_011760 PF00005 ABC transporter IXO1088_011765 PF05681 Fumarate hydratase (Fumerase) IXO1088_011765 PF05683 Fumarase C-terminus IXO1088_011810 PF00990 Diguanylate cyclase, GGDEF domain IXO1088_011810 PF08448 PAS fold IXO1088_011855 PF01434 Peptidase family M41 IXO1088_011855 PF06480 FtsH Extracellular IXO1088_011855 PF17862 AAA+ lid domain IXO1088_011855 PF00004 ATPase family associated with various cellular activities (AAA) IXO1088_011860 PF01609 Transposase DDE domain IXO1088_011860 PF05598 Transposase domain (DUF772) IXO1088_011870 PF05598 Transposase domain (DUF772) IXO1088_011870 PF01609 Transposase DDE domain IXO1088_011900 PF13175 AAA ATPase domain IXO1088_011915 PF01451 Low molecular weight phosphotyrosine protein phosphatase IXO1088_011920 PF03960 ArsC family IXO1088_011925 PF03358 NADPH-dependent FMN reductase IXO1088_011930 PF02040 Arsenical pump membrane protein IXO1088_011935 PF00581 Rhodanese-like domain IXO1088_011945 PF13700 Domain of unknown function (DUF4158) IXO1088_011945 PF01526 Tn3 transposase DDE domain IXO1088_011955 PF00672 HAMP domain IXO1088_011955 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IXO1088_011955 PF01627 Hpt domain IXO1088_011955 PF00072 Response regulator receiver domain IXO1088_011955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_011955 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_011990 PF01081 KDPG and KHG aldolase IXO1088_011995 PF00920 Dehydratase family IXO1088_012000 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase IXO1088_012005 PF02685 Glucokinase IXO1088_012010 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain IXO1088_012010 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain IXO1088_012015 PF00005 ABC transporter IXO1088_012015 PF17912 MalK OB fold domain IXO1088_012025 PF01571 Aminomethyltransferase folate-binding domain IXO1088_012035 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IXO1088_012040 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IXO1088_012045 PF02910 Fumarate reductase flavoprotein C-term IXO1088_012045 PF00890 FAD binding domain IXO1088_012055 PF13085 2Fe-2S iron-sulfur cluster binding domain IXO1088_012060 PF03937 Flavinator of succinate dehydrogenase IXO1088_012070 PF12704 MacB-like periplasmic core domain IXO1088_012070 PF02687 FtsX-like permease family IXO1088_012075 PF00005 ABC transporter IXO1088_012090 PF03772 Competence protein IXO1088_012090 PF00753 Metallo-beta-lactamase superfamily IXO1088_012095 PF01618 MotA/TolQ/ExbB proton channel family IXO1088_012105 PF00664 ABC transporter transmembrane region IXO1088_012105 PF00005 ABC transporter IXO1088_012110 PF02606 Tetraacyldisaccharide-1-P 4'-kinase IXO1088_012115 PF02348 Cytidylyltransferase IXO1088_012120 PF01451 Low molecular weight phosphotyrosine protein phosphatase IXO1088_012130 PF01541 GIY-YIG catalytic domain IXO1088_012130 PF02151 UvrB/uvrC motif IXO1088_012130 PF08459 UvrC Helix-hairpin-helix N-terminal IXO1088_012135 PF01066 CDP-alcohol phosphatidyltransferase IXO1088_012155 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IXO1088_012180 PF13333 Integrase core domain IXO1088_012180 PF00665 Integrase core domain IXO1088_012180 PF13276 HTH-like domain IXO1088_012210 PF03377 TAL effector repeat IXO1088_012220 PF07517 SecA DEAD-like domain IXO1088_012220 PF01043 SecA preprotein cross-linking domain IXO1088_012220 PF02810 SEC-C motif IXO1088_012220 PF07516 SecA Wing and Scaffold domain IXO1088_012360 PF03377 TAL effector repeat IXO1088_012375 PF03377 TAL effector repeat IXO1088_012385 PF01502 Phosphoribosyl-AMP cyclohydrolase IXO1088_012385 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase IXO1088_012390 PF00977 Histidine biosynthesis protein IXO1088_012395 PF00977 Histidine biosynthesis protein IXO1088_012400 PF00117 Glutamine amidotransferase class-I IXO1088_012405 PF00475 Imidazoleglycerol-phosphate dehydratase IXO1088_012410 PF00155 Aminotransferase class I and II IXO1088_012415 PF00815 Histidinol dehydrogenase IXO1088_012420 PF01634 ATP phosphoribosyltransferase IXO1088_012420 PF08029 HisG, C-terminal domain IXO1088_012450 PF03129 Anticodon binding domain IXO1088_012450 PF13393 Histidyl-tRNA synthetase IXO1088_012470 PF00291 Pyridoxal-phosphate dependent enzyme IXO1088_012470 PF14821 Threonine synthase N terminus IXO1088_012485 PF00288 GHMP kinases N terminal domain IXO1088_012485 PF08544 GHMP kinases C terminal IXO1088_012490 PF03447 Homoserine dehydrogenase, NAD binding domain IXO1088_012490 PF00742 Homoserine dehydrogenase IXO1088_012490 PF13840 ACT domain IXO1088_012490 PF01842 ACT domain IXO1088_012490 PF00696 Amino acid kinase family IXO1088_012505 PF00171 Aldehyde dehydrogenase family IXO1088_012525 PF01180 Dihydroorotate dehydrogenase IXO1088_012530 PF01565 FAD binding domain IXO1088_012530 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IXO1088_012535 PF00892 EamA-like transporter family IXO1088_012545 PF01177 Asp/Glu/Hydantoin racemase IXO1088_012565 PF07690 Major Facilitator Superfamily IXO1088_012575 PF01569 PAP2 superfamily IXO1088_012580 PF04551 GcpE protein IXO1088_012590 PF00072 Response regulator receiver domain IXO1088_012605 PF16921 Tex protein YqgF-like domain IXO1088_012605 PF17674 HHH domain IXO1088_012605 PF00575 S1 RNA binding domain IXO1088_012605 PF09371 Tex-like protein N-terminal domain IXO1088_012615 PF00355 Rieske [2Fe-2S] domain IXO1088_012615 PF01266 FAD dependent oxidoreductase IXO1088_012630 PF00561 alpha/beta hydrolase fold IXO1088_012640 PF01066 CDP-alcohol phosphatidyltransferase IXO1088_012660 PF03618 Kinase/pyrophosphorylase IXO1088_012665 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain IXO1088_012665 PF02896 PEP-utilising enzyme, TIM barrel domain IXO1088_012665 PF00391 PEP-utilising enzyme, mobile domain IXO1088_012670 PF05552 Conserved TM helix IXO1088_012670 PF00924 Mechanosensitive ion channel IXO1088_012675 PF00929 Exonuclease IXO1088_012680 PF14437 MafB19-like deaminase IXO1088_012685 PF02742 Iron dependent repressor, metal binding and dimerisation domain IXO1088_012685 PF01325 Iron dependent repressor, N-terminal DNA binding domain IXO1088_012690 PF01566 Natural resistance-associated macrophage protein IXO1088_012700 PF00072 Response regulator receiver domain IXO1088_012700 PF00196 Bacterial regulatory proteins, luxR family IXO1088_012715 PF03601 Conserved hypothetical protein 698 IXO1088_012740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO1088_012740 PF03466 LysR substrate binding domain IXO1088_012745 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IXO1088_012745 PF00361 Proton-conducting membrane transporter IXO1088_012745 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus IXO1088_012750 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) IXO1088_012755 PF02540 NAD synthase IXO1088_012755 PF00958 GMP synthase C terminal domain IXO1088_012755 PF00117 Glutamine amidotransferase class-I IXO1088_012760 PF00478 IMP dehydrogenase / GMP reductase domain IXO1088_012760 PF00571 CBS domain IXO1088_012765 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IXO1088_012765 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IXO1088_012785 PF00483 Nucleotidyl transferase IXO1088_012790 PF02719 Polysaccharide biosynthesis protein IXO1088_012795 PF00953 Glycosyl transferase family 4 IXO1088_012800 PF18073 Rubredoxin metal binding domain IXO1088_012810 PF00216 Bacterial DNA-binding protein IXO1088_012815 PF00575 S1 RNA binding domain IXO1088_012820 PF02224 Cytidylate kinase IXO1088_012825 PF00444 Ribosomal protein L36 IXO1088_012835 PF04371 Porphyromonas-type peptidyl-arginine deiminase IXO1088_012845 PF00795 Carbon-nitrogen hydrolase IXO1088_012870 PF00528 Binding-protein-dependent transport system inner membrane component IXO1088_012875 PF00528 Binding-protein-dependent transport system inner membrane component IXO1088_012915 PF03795 YCII-related domain IXO1088_012920 PF02616 Segregation and condensation protein ScpA IXO1088_012925 PF04079 Segregation and condensation complex subunit ScpB IXO1088_012930 PF01479 S4 domain IXO1088_012930 PF00849 RNA pseudouridylate synthase IXO1088_012950 PF00795 Carbon-nitrogen hydrolase IXO1088_012955 PF00155 Aminotransferase class I and II IXO1088_012960 PF00005 ABC transporter IXO1088_012965 PF03379 CcmB protein IXO1088_012970 PF01578 Cytochrome C assembly protein IXO1088_012980 PF03100 CcmE IXO1088_012985 PF01578 Cytochrome C assembly protein IXO1088_012985 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IXO1088_012990 PF08534 Redoxin IXO1088_012995 PF03918 Cytochrome C biogenesis protein IXO1088_013020 PF01565 FAD binding domain IXO1088_013020 PF02913 FAD linked oxidases, C-terminal domain IXO1088_013025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IXO1088_013025 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IXO1088_013035 PF13520 Amino acid permease IXO1088_013040 PF13520 Amino acid permease IXO1088_013045 PF00596 Class II Aldolase and Adducin N-terminal domain IXO1088_013050 PF03079 ARD/ARD' family IXO1088_013080 PF01609 Transposase DDE domain IXO1088_013080 PF05598 Transposase domain (DUF772) IXO1088_013095 PF00899 ThiF family IXO1088_013110 PF05598 Transposase domain (DUF772) IXO1088_013165 PF03454 MoeA C-terminal region (domain IV) IXO1088_013165 PF00994 Probable molybdopterin binding domain IXO1088_013165 PF03453 MoeA N-terminal region (domain I and II) IXO1088_013170 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IXO1088_013170 PF01926 50S ribosome-binding GTPase IXO1088_013175 PF13360 PQQ-like domain IXO1088_013175 PF01011 PQQ enzyme repeat IXO1088_013185 PF13464 Domain of unknown function (DUF4115) IXO1088_013195 PF04055 Radical SAM superfamily IXO1088_013200 PF00334 Nucleoside diphosphate kinase IXO1088_013210 PF00378 Enoyl-CoA hydratase/isomerase IXO1088_013210 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IXO1088_013210 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IXO1088_013215 PF02803 Thiolase, C-terminal domain IXO1088_013215 PF00108 Thiolase, N-terminal domain IXO1088_013225 PF00654 Voltage gated chloride channel IXO1088_013235 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IXO1088_013245 PF00004 ATPase family associated with various cellular activities (AAA) IXO1088_013245 PF12002 MgsA AAA+ ATPase C terminal IXO1088_013245 PF16193 AAA C-terminal domain IXO1088_013260 PF03548 Outer membrane lipoprotein carrier protein LolA IXO1088_013270 PF01580 FtsK/SpoIIIE family IXO1088_013270 PF09397 Ftsk gamma domain IXO1088_013270 PF17854 FtsK alpha domain IXO1088_013270 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IXO1088_013275 PF07992 Pyridine nucleotide-disulphide oxidoreductase IXO1088_013290 PF03588 Leucyl/phenylalanyl-tRNA protein transferase IXO1088_013295 PF01176 Translation initiation factor 1A / IF-1 IXO1088_013300 PF17871 AAA lid domain IXO1088_013300 PF00004 ATPase family associated with various cellular activities (AAA) IXO1088_013300 PF07724 AAA domain (Cdc48 subfamily) IXO1088_013300 PF02861 Clp amino terminal domain, pathogenicity island component IXO1088_013300 PF10431 C-terminal, D2-small domain, of ClpB protein IXO1088_013305 PF02617 ATP-dependent Clp protease adaptor protein ClpS IXO1088_013310 PF00293 NUDIX domain IXO1088_013320 PF04356 Protein of unknown function (DUF489) IXO1088_013325 PF12729 Four helix bundle sensory module for signal transduction IXO1088_013325 PF00672 HAMP domain IXO1088_013325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXO1088_013340 PF00990 Diguanylate cyclase, GGDEF domain IXO1088_013340 PF08447 PAS fold IXO1088_013340 PF08448 PAS fold IXO1088_013340 PF00563 EAL domain IXO1088_013345 PF07730 Histidine kinase IXO1088_013345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_013350 PF00990 Diguanylate cyclase, GGDEF domain IXO1088_013350 PF00563 EAL domain IXO1088_013350 PF03707 Bacterial signalling protein N terminal repeat IXO1088_013355 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_013355 PF13426 PAS domain IXO1088_013355 PF13188 PAS domain IXO1088_013355 PF00989 PAS fold IXO1088_013355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_013375 PF01584 CheW-like domain IXO1088_013375 PF00072 Response regulator receiver domain IXO1088_013385 PF00460 Flagella basal body rod protein IXO1088_013385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IXO1088_013390 PF03963 Flagellar hook capping protein - N-terminal region IXO1088_013395 PF07559 Flagellar basal body protein FlaE IXO1088_013395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IXO1088_013395 PF00460 Flagella basal body rod protein IXO1088_013400 PF00460 Flagella basal body rod protein IXO1088_013400 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IXO1088_013410 PF00460 Flagella basal body rod protein IXO1088_013410 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IXO1088_013415 PF02107 Flagellar L-ring protein IXO1088_013420 PF02119 Flagellar P-ring protein IXO1088_013425 PF10135 Rod binding protein IXO1088_013425 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase IXO1088_013430 PF07196 Flagellin hook IN motif IXO1088_013430 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IXO1088_013440 PF00669 Bacterial flagellin N-terminal helical region IXO1088_013440 PF00700 Bacterial flagellin C-terminal helical region IXO1088_013445 PF02465 Flagellar hook-associated protein 2 N-terminus IXO1088_013445 PF07196 Flagellin hook IN motif IXO1088_013445 PF07195 Flagellar hook-associated protein 2 C-terminus IXO1088_013450 PF02561 Flagellar protein FliS IXO1088_013465 PF00196 Bacterial regulatory proteins, luxR family IXO1088_013465 PF00072 Response regulator receiver domain IXO1088_013470 PF00309 Sigma-54 factor, Activator interacting domain (AID) IXO1088_013470 PF04963 Sigma-54 factor, core binding domain IXO1088_013470 PF04552 Sigma-54, DNA binding domain IXO1088_013475 PF00072 Response regulator receiver domain IXO1088_013475 PF01339 CheB methylesterase IXO1088_013480 PF00158 Sigma-54 interaction domain IXO1088_013480 PF02954 Bacterial regulatory protein, Fis family IXO1088_013480 PF06490 Flagellar regulatory protein FleQ IXO1088_013485 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IXO1088_013495 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IXO1088_013495 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IXO1088_013530 PF00535 Glycosyl transferase family 2 IXO1088_013530 PF00534 Glycosyl transferases group 1 IXO1088_013540 PF02049 Flagellar hook-basal body complex protein FliE IXO1088_013545 PF01514 Secretory protein of YscJ/FliF family IXO1088_013545 PF08345 Flagellar M-ring protein C-terminal IXO1088_013550 PF14842 FliG N-terminal domain IXO1088_013550 PF14841 FliG middle domain IXO1088_013550 PF01706 FliG C-terminal domain IXO1088_013560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IXO1088_013560 PF18269 T3SS EscN ATPase C-terminal domain IXO1088_013580 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IXO1088_013580 PF02154 Flagellar motor switch protein FliM IXO1088_013585 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IXO1088_013590 PF04347 Flagellar biosynthesis protein, FliO IXO1088_013595 PF00813 FliP family IXO1088_013605 PF01313 Bacterial export proteins, family 3 IXO1088_013610 PF01311 Bacterial export proteins, family 1 IXO1088_013615 PF00563 EAL domain IXO1088_013615 PF13188 PAS domain IXO1088_013615 PF03707 Bacterial signalling protein N terminal repeat IXO1088_013615 PF00990 Diguanylate cyclase, GGDEF domain IXO1088_013620 PF03707 Bacterial signalling protein N terminal repeat IXO1088_013620 PF00563 EAL domain IXO1088_013620 PF00990 Diguanylate cyclase, GGDEF domain IXO1088_013620 PF13188 PAS domain IXO1088_013625 PF00563 EAL domain IXO1088_013625 PF00990 Diguanylate cyclase, GGDEF domain IXO1088_013625 PF03707 Bacterial signalling protein N terminal repeat IXO1088_013630 PF01312 FlhB HrpN YscU SpaS Family IXO1088_013635 PF00771 FHIPEP family IXO1088_013640 PF00448 SRP54-type protein, GTPase domain IXO1088_013645 PF10609 NUBPL iron-transfer P-loop NTPase IXO1088_013650 PF04539 Sigma-70 region 3 IXO1088_013650 PF04545 Sigma-70, region 4 IXO1088_013650 PF04542 Sigma-70 region 2 IXO1088_013655 PF00072 Response regulator receiver domain IXO1088_013660 PF04344 Chemotaxis phosphatase, CheZ IXO1088_013665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_013665 PF02895 Signal transducing histidine kinase, homodimeric domain IXO1088_013665 PF01627 Hpt domain IXO1088_013665 PF00072 Response regulator receiver domain IXO1088_013665 PF01584 CheW-like domain IXO1088_013705 PF03527 RHS protein IXO1088_013705 PF05593 RHS Repeat IXO1088_013760 PF00034 Cytochrome c IXO1088_013805 PF00005 ABC transporter IXO1088_013805 PF00664 ABC transporter transmembrane region IXO1088_013810 PF00664 ABC transporter transmembrane region IXO1088_013810 PF00005 ABC transporter IXO1088_013815 PF01654 Cytochrome bd terminal oxidase subunit I IXO1088_013820 PF01654 Cytochrome bd terminal oxidase subunit I IXO1088_013845 PF02129 X-Pro dipeptidyl-peptidase (S15 family) IXO1088_013845 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain IXO1088_013850 PF00171 Aldehyde dehydrogenase family IXO1088_013855 PF01472 PUA domain IXO1088_013855 PF00696 Amino acid kinase family IXO1088_013870 PF00206 Lyase IXO1088_013875 PF01118 Semialdehyde dehydrogenase, NAD binding domain IXO1088_013885 PF00696 Amino acid kinase family IXO1088_013885 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase IXO1088_013890 PF07687 Peptidase dimerisation domain IXO1088_013890 PF01546 Peptidase family M20/M25/M40 IXO1088_013900 PF00764 Arginosuccinate synthase IXO1088_013905 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IXO1088_013905 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IXO1088_013915 PF01406 tRNA synthetases class I (C) catalytic domain IXO1088_013915 PF09190 DALR domain IXO1088_013920 PF02657 Fe-S metabolism associated domain IXO1088_013935 PF01258 Prokaryotic dksA/traR C4-type zinc finger IXO1088_013940 PF01809 Putative membrane protein insertion efficiency factor IXO1088_013945 PF01979 Amidohydrolase family IXO1088_013950 PF01551 Peptidase family M23 IXO1088_013950 PF08460 Bacterial SH3 domain IXO1088_013980 PF05598 Transposase domain (DUF772) IXO1088_013980 PF01609 Transposase DDE domain IXO1088_014000 PF01095 Pectinesterase IXO1088_014010 PF00295 Glycosyl hydrolases family 28 IXO1088_014020 PF13419 Haloacid dehalogenase-like hydrolase IXO1088_014030 PF01979 Amidohydrolase family IXO1088_014040 PF01132 Elongation factor P (EF-P) OB domain IXO1088_014040 PF08207 Elongation factor P (EF-P) KOW-like domain IXO1088_014040 PF09285 Elongation factor P, C-terminal IXO1088_014045 PF04055 Radical SAM superfamily IXO1088_014050 PF13188 PAS domain IXO1088_014050 PF00990 Diguanylate cyclase, GGDEF domain IXO1088_014050 PF00563 EAL domain IXO1088_014050 PF03707 Bacterial signalling protein N terminal repeat IXO1088_014060 PF00588 SpoU rRNA Methylase family IXO1088_014065 PF00459 Inositol monophosphatase family IXO1088_014070 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IXO1088_014070 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IXO1088_014075 PF00545 ribonuclease IXO1088_014100 PF03880 DbpA RNA binding domain IXO1088_014100 PF00270 DEAD/DEAH box helicase IXO1088_014100 PF00271 Helicase conserved C-terminal domain IXO1088_014105 PF00156 Phosphoribosyl transferase domain IXO1088_014110 PF02696 Uncharacterized ACR, YdiU/UPF0061 family IXO1088_014120 PF02798 Glutathione S-transferase, N-terminal domain IXO1088_014120 PF14497 Glutathione S-transferase, C-terminal domain IXO1088_014125 PF00313 'Cold-shock' DNA-binding domain IXO1088_014130 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 IXO1088_014135 PF07152 YaeQ protein IXO1088_014145 PF00990 Diguanylate cyclase, GGDEF domain IXO1088_014145 PF00072 Response regulator receiver domain IXO1088_014145 PF00563 EAL domain IXO1088_014150 PF01435 Peptidase family M48 IXO1088_014155 PF00749 tRNA synthetases class I (E and Q), catalytic domain IXO1088_014160 PF00106 short chain dehydrogenase IXO1088_014165 PF05233 PHB accumulation regulatory domain IXO1088_014165 PF07879 PHB/PHA accumulation regulator DNA-binding domain IXO1088_014185 PF08676 MutL C terminal dimerisation domain IXO1088_014185 PF01119 DNA mismatch repair protein, C-terminal domain IXO1088_014190 PF11741 AMIN domain IXO1088_014190 PF01520 N-acetylmuramoyl-L-alanine amidase IXO1088_014195 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE IXO1088_014200 PF01256 Carbohydrate kinase IXO1088_014200 PF03853 YjeF-related protein N-terminus IXO1088_014205 PF08331 Domain of unknown function (DUF1730) IXO1088_014210 PF02601 Exonuclease VII, large subunit IXO1088_014210 PF13742 OB-fold nucleic acid binding domain IXO1088_014225 PF03781 Sulfatase-modifying factor enzyme 1 IXO1088_014240 PF00570 HRDC domain IXO1088_014240 PF01612 3'-5' exonuclease IXO1088_014245 PF04679 ATP dependent DNA ligase C terminal region IXO1088_014245 PF01068 ATP dependent DNA ligase domain IXO1088_014245 PF13298 DNA polymerase Ligase (LigD) IXO1088_014245 PF13298 DNA polymerase Ligase (LigD) IXO1088_014245 PF04679 ATP dependent DNA ligase C terminal region IXO1088_014245 PF01068 ATP dependent DNA ligase domain IXO1088_014295 PF14850 DNA-binding domain of Proline dehydrogenase IXO1088_014295 PF01619 Proline dehydrogenase IXO1088_014295 PF00171 Aldehyde dehydrogenase family IXO1088_014295 PF18327 Proline utilization A proline dehydrogenase N-terminal domain IXO1088_014315 PF00872 Transposase, Mutator family IXO1088_014360 PF04386 Stringent starvation protein B IXO1088_014365 PF00043 Glutathione S-transferase, C-terminal domain IXO1088_014365 PF02798 Glutathione S-transferase, N-terminal domain IXO1088_014370 PF02167 Cytochrome C1 family IXO1088_014375 PF00033 Cytochrome b/b6/petB IXO1088_014375 PF00032 Cytochrome b(C-terminal)/b6/petD IXO1088_014380 PF00355 Rieske [2Fe-2S] domain IXO1088_014380 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal IXO1088_014390 PF01464 Transglycosylase SLT domain IXO1088_014410 PF01938 TRAM domain IXO1088_014410 PF00919 Uncharacterized protein family UPF0004 IXO1088_014410 PF04055 Radical SAM superfamily IXO1088_014415 PF02562 PhoH-like protein IXO1088_014425 PF02130 Uncharacterized protein family UPF0054 IXO1088_014435 PF00571 CBS domain IXO1088_014435 PF03471 Transporter associated domain IXO1088_014450 PF00171 Aldehyde dehydrogenase family IXO1088_014460 PF00528 Binding-protein-dependent transport system inner membrane component IXO1088_014470 PF08402 TOBE domain IXO1088_014470 PF00005 ABC transporter IXO1088_014475 PF02321 Outer membrane efflux protein IXO1088_014480 PF07690 Major Facilitator Superfamily IXO1088_014485 PF13533 Biotin-lipoyl like IXO1088_014505 PF00120 Glutamine synthetase, catalytic domain IXO1088_014515 PF00120 Glutamine synthetase, catalytic domain IXO1088_014520 PF01266 FAD dependent oxidoreductase IXO1088_014525 PF00990 Diguanylate cyclase, GGDEF domain IXO1088_014525 PF00072 Response regulator receiver domain IXO1088_014530 PF00083 Sugar (and other) transporter IXO1088_014530 PF07690 Major Facilitator Superfamily IXO1088_014540 PF00384 Molybdopterin oxidoreductase IXO1088_014545 PF02634 FdhD/NarQ family IXO1088_014550 PF07690 Major Facilitator Superfamily IXO1088_014560 PF00202 Aminotransferase class-III IXO1088_014565 PF00005 ABC transporter IXO1088_014575 PF04286 Protein of unknown function (DUF445) IXO1088_014580 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IXO1088_014580 PF00672 HAMP domain IXO1088_014580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_014580 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_014580 PF01627 Hpt domain IXO1088_014580 PF00072 Response regulator receiver domain IXO1088_014585 PF00072 Response regulator receiver domain IXO1088_014590 PF01609 Transposase DDE domain IXO1088_014590 PF05598 Transposase domain (DUF772) IXO1088_014600 PF05088 Bacterial NAD-glutamate dehydrogenase IXO1088_014610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IXO1088_014610 PF00529 HlyD membrane-fusion protein of T1SS IXO1088_014615 PF00873 AcrB/AcrD/AcrF family IXO1088_014635 PF00356 Bacterial regulatory proteins, lacI family IXO1088_014640 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IXO1088_014640 PF00391 PEP-utilising enzyme, mobile domain IXO1088_014640 PF05524 PEP-utilising enzyme, N-terminal IXO1088_014640 PF02896 PEP-utilising enzyme, TIM barrel domain IXO1088_014640 PF00381 PTS HPr component phosphorylation site IXO1088_014645 PF00294 pfkB family carbohydrate kinase IXO1088_014650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IXO1088_014665 PF01609 Transposase DDE domain IXO1088_014665 PF05598 Transposase domain (DUF772) IXO1088_014685 PF05598 Transposase domain (DUF772) IXO1088_014685 PF01609 Transposase DDE domain IXO1088_014745 PF03377 TAL effector repeat IXO1088_014750 PF04717 Type VI secretion system, phage-baseplate injector IXO1088_014750 PF16671 Actin cross-linking domain IXO1088_014795 PF01609 Transposase DDE domain IXO1088_014795 PF05598 Transposase domain (DUF772) IXO1088_014825 PF01555 DNA methylase IXO1088_014850 PF00593 TonB dependent receptor IXO1088_014850 PF07715 TonB-dependent Receptor Plug Domain IXO1088_014860 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IXO1088_014860 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IXO1088_014870 PF07715 TonB-dependent Receptor Plug Domain IXO1088_014870 PF00593 TonB dependent receptor IXO1088_014880 PF01618 MotA/TolQ/ExbB proton channel family IXO1088_014885 PF13677 Membrane MotB of proton-channel complex MotA/MotB IXO1088_014885 PF00691 OmpA family IXO1088_014890 PF13614 AAA domain IXO1088_014895 PF01584 CheW-like domain IXO1088_014905 PF00072 Response regulator receiver domain IXO1088_014910 PF01584 CheW-like domain IXO1088_014910 PF02895 Signal transducing histidine kinase, homodimeric domain IXO1088_014910 PF09078 CheY binding IXO1088_014910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_014910 PF01627 Hpt domain IXO1088_014935 PF02203 Tar ligand binding domain homologue IXO1088_014935 PF00672 HAMP domain IXO1088_014935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXO1088_014950 PF02203 Tar ligand binding domain homologue IXO1088_014950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXO1088_014950 PF00672 HAMP domain IXO1088_014960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXO1088_014960 PF02203 Tar ligand binding domain homologue IXO1088_014960 PF00672 HAMP domain IXO1088_014970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXO1088_014970 PF02203 Tar ligand binding domain homologue IXO1088_014970 PF00672 HAMP domain IXO1088_014975 PF00672 HAMP domain IXO1088_014975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXO1088_014975 PF02203 Tar ligand binding domain homologue IXO1088_014980 PF00672 HAMP domain IXO1088_014980 PF02203 Tar ligand binding domain homologue IXO1088_014980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXO1088_014985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXO1088_014985 PF02203 Tar ligand binding domain homologue IXO1088_014985 PF00672 HAMP domain IXO1088_015000 PF07238 PilZ domain IXO1088_015000 PF07317 Flagellar regulator YcgR IXO1088_015005 PF01584 CheW-like domain IXO1088_015035 PF03705 CheR methyltransferase, all-alpha domain IXO1088_015035 PF01739 CheR methyltransferase, SAM binding domain IXO1088_015040 PF03975 CheD chemotactic sensory transduction IXO1088_015045 PF00072 Response regulator receiver domain IXO1088_015045 PF01339 CheB methylesterase IXO1088_015050 PF00563 EAL domain IXO1088_015050 PF00990 Diguanylate cyclase, GGDEF domain IXO1088_015050 PF03707 Bacterial signalling protein N terminal repeat IXO1088_015065 PF00561 alpha/beta hydrolase fold IXO1088_015070 PF11791 Aconitate B N-terminal domain IXO1088_015070 PF06434 Aconitate hydratase 2 N-terminus IXO1088_015070 PF00330 Aconitase family (aconitate hydratase) IXO1088_015085 PF00330 Aconitase family (aconitate hydratase) IXO1088_015085 PF00694 Aconitase C-terminal domain IXO1088_015095 PF13193 AMP-binding enzyme C-terminal domain IXO1088_015095 PF00501 AMP-binding enzyme IXO1088_015100 PF00378 Enoyl-CoA hydratase/isomerase IXO1088_015105 PF00072 Response regulator receiver domain IXO1088_015105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_015105 PF01627 Hpt domain IXO1088_015105 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_015115 PF00072 Response regulator receiver domain IXO1088_015120 PF01336 OB-fold nucleic acid binding domain IXO1088_015120 PF00152 tRNA synthetases class II (D, K and N) IXO1088_015145 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 IXO1088_015145 PF13542 Helix-turn-helix domain of transposase family ISL3 IXO1088_015145 PF01610 Transposase IXO1088_015180 PF01368 DHH family IXO1088_015180 PF02272 DHHA1 domain IXO1088_015180 PF17768 RecJ OB domain IXO1088_015190 PF01272 Transcription elongation factor, GreA/GreB, C-term IXO1088_015190 PF03449 Transcription elongation factor, N-terminal IXO1088_015195 PF02142 MGS-like domain IXO1088_015195 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IXO1088_015195 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IXO1088_015205 PF00117 Glutamine amidotransferase class-I IXO1088_015205 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IXO1088_015210 PF01113 Dihydrodipicolinate reductase, N-terminus IXO1088_015210 PF05173 Dihydrodipicolinate reductase, C-terminus IXO1088_015220 PF03473 MOSC domain IXO1088_015220 PF03475 3-alpha domain IXO1088_015225 PF00155 Aminotransferase class I and II IXO1088_015245 PF07664 Ferrous iron transport protein B C terminus IXO1088_015245 PF02421 Ferrous iron transport protein B IXO1088_015245 PF07670 Nucleoside recognition IXO1088_015255 PF00378 Enoyl-CoA hydratase/isomerase IXO1088_015265 PF00682 HMGL-like IXO1088_015270 PF00106 short chain dehydrogenase IXO1088_015275 PF09285 Elongation factor P, C-terminal IXO1088_015275 PF08207 Elongation factor P (EF-P) KOW-like domain IXO1088_015275 PF01132 Elongation factor P (EF-P) OB domain IXO1088_015295 PF00083 Sugar (and other) transporter IXO1088_015305 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IXO1088_015305 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IXO1088_015315 PF01055 Glycosyl hydrolases family 31 IXO1088_015315 PF17137 Domain of unknown function (DUF5110) IXO1088_015315 PF16338 Domain of unknown function (DUF4968) IXO1088_015325 PF03466 LysR substrate binding domain IXO1088_015325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO1088_015330 PF01081 KDPG and KHG aldolase IXO1088_015335 PF13378 Enolase C-terminal domain-like IXO1088_015335 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IXO1088_015340 PF08450 SMP-30/Gluconolactonase/LRE-like region IXO1088_015345 PF05035 2-keto-3-deoxy-galactonokinase IXO1088_015350 PF00037 4Fe-4S binding domain IXO1088_015350 PF11953 Domain of unknown function (DUF3470) IXO1088_015360 PF00701 Dihydrodipicolinate synthetase family IXO1088_015375 PF00578 AhpC/TSA family IXO1088_015380 PF02562 PhoH-like protein IXO1088_015380 PF13638 PIN domain IXO1088_015390 PF08543 Phosphomethylpyrimidine kinase IXO1088_015420 PF03466 LysR substrate binding domain IXO1088_015420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO1088_015425 PF17954 Quercetinase C-terminal cupin domain IXO1088_015425 PF02678 Pirin IXO1088_015455 PF03796 DnaB-like helicase C terminal domain IXO1088_015455 PF00772 DnaB-like helicase N terminal domain IXO1088_015475 PF02599 Global regulator protein family IXO1088_015480 PF02272 DHHA1 domain IXO1088_015480 PF01411 tRNA synthetases class II (A) IXO1088_015480 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IXO1088_015485 PF02631 RecX family IXO1088_015490 PF00154 recA bacterial DNA recombination protein IXO1088_015495 PF00717 Peptidase S24-like IXO1088_015495 PF01726 LexA DNA binding domain IXO1088_015500 PF03109 ABC1 family IXO1088_015505 PF02464 Competence-damaged protein IXO1088_015510 PF01926 50S ribosome-binding GTPase IXO1088_015510 PF13167 GTP-binding GTPase N-terminal IXO1088_015510 PF16360 GTP-binding GTPase Middle Region IXO1088_015515 PF17209 Hfq protein IXO1088_015525 PF00809 Pterin binding enzyme IXO1088_015530 PF00004 ATPase family associated with various cellular activities (AAA) IXO1088_015530 PF01434 Peptidase family M41 IXO1088_015530 PF06480 FtsH Extracellular IXO1088_015530 PF17862 AAA+ lid domain IXO1088_015535 PF01728 FtsJ-like methyltransferase IXO1088_015540 PF01985 CRS1 / YhbY (CRM) domain IXO1088_015550 PF01551 Peptidase family M23 IXO1088_015550 PF01476 LysM domain IXO1088_015555 PF09335 SNARE associated Golgi protein IXO1088_015565 PF01975 Survival protein SurE IXO1088_015570 PF01713 Smr domain IXO1088_015575 PF01142 tRNA pseudouridine synthase D (TruD) IXO1088_015580 PF02542 YgbB family IXO1088_015590 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IXO1088_015595 PF04977 Septum formation initiator IXO1088_015600 PF03952 Enolase, N-terminal domain IXO1088_015600 PF00113 Enolase, C-terminal TIM barrel domain IXO1088_015610 PF00793 DAHP synthetase I family IXO1088_015615 PF06418 CTP synthase N-terminus IXO1088_015615 PF00117 Glutamine amidotransferase class-I IXO1088_015625 PF01751 Toprim domain IXO1088_015625 PF00986 DNA gyrase B subunit, carboxyl terminus IXO1088_015625 PF00204 DNA gyrase B IXO1088_015625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_015640 PF02698 DUF218 domain IXO1088_015645 PF01384 Phosphate transporter family IXO1088_015660 PF03471 Transporter associated domain IXO1088_015660 PF01595 Cyclin M transmembrane N-terminal domain IXO1088_015660 PF00571 CBS domain IXO1088_015675 PF00296 Luciferase-like monooxygenase IXO1088_015695 PF07690 Major Facilitator Superfamily IXO1088_015705 PF00664 ABC transporter transmembrane region IXO1088_015705 PF00005 ABC transporter IXO1088_015710 PF00005 ABC transporter IXO1088_015725 PF13579 Glycosyl transferase 4-like domain IXO1088_015725 PF00534 Glycosyl transferases group 1 IXO1088_015745 PF08241 Methyltransferase domain IXO1088_015760 PF00535 Glycosyl transferase family 2 IXO1088_015765 PF01943 Polysaccharide biosynthesis protein IXO1088_015770 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IXO1088_015790 PF05523 WxcM-like, C-terminal IXO1088_015805 PF00034 Cytochrome c IXO1088_015815 PF04542 Sigma-70 region 2 IXO1088_015815 PF08281 Sigma-70, region 4 IXO1088_015825 PF00082 Subtilase family IXO1088_015830 PF01578 Cytochrome C assembly protein IXO1088_015835 PF04995 Heme exporter protein D (CcmD) IXO1088_015840 PF03100 CcmE IXO1088_015845 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IXO1088_015845 PF01578 Cytochrome C assembly protein IXO1088_015850 PF08534 Redoxin IXO1088_015855 PF03918 Cytochrome C biogenesis protein IXO1088_015865 PF03377 TAL effector repeat IXO1088_015880 PF03377 TAL effector repeat IXO1088_015895 PF03377 TAL effector repeat IXO1088_015910 PF03377 TAL effector repeat IXO1088_015930 PF00873 AcrB/AcrD/AcrF family IXO1088_015935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IXO1088_015935 PF00529 HlyD membrane-fusion protein of T1SS IXO1088_015980 PF00072 Response regulator receiver domain IXO1088_015980 PF00486 Transcriptional regulatory protein, C terminal IXO1088_015985 PF00034 Cytochrome c IXO1088_015985 PF03150 Di-haem cytochrome c peroxidase IXO1088_015990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_015990 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_015995 PF03466 LysR substrate binding domain IXO1088_015995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO1088_016015 PF00069 Protein kinase domain IXO1088_016055 PF16671 Actin cross-linking domain IXO1088_016055 PF04717 Type VI secretion system, phage-baseplate injector IXO1088_016080 PF17871 AAA lid domain IXO1088_016080 PF07724 AAA domain (Cdc48 subfamily) IXO1088_016080 PF00004 ATPase family associated with various cellular activities (AAA) IXO1088_016080 PF10431 C-terminal, D2-small domain, of ClpB protein IXO1088_016105 PF05638 Type VI secretion system effector, Hcp IXO1088_016135 PF01609 Transposase DDE domain IXO1088_016135 PF05598 Transposase domain (DUF772) IXO1088_016165 PF05598 Transposase domain (DUF772) IXO1088_016165 PF01609 Transposase DDE domain IXO1088_016170 PF05598 Transposase domain (DUF772) IXO1088_016170 PF01609 Transposase DDE domain IXO1088_016195 PF01106 NifU-like domain IXO1088_016200 PF01329 Pterin 4 alpha carbinolamine dehydratase IXO1088_016210 PF02535 ZIP Zinc transporter IXO1088_016215 PF02535 ZIP Zinc transporter IXO1088_016220 PF11737 Protein of unknown function (DUF3300) IXO1088_016225 PF00849 RNA pseudouridylate synthase IXO1088_016225 PF01479 S4 domain IXO1088_016230 PF12111 Polyribonucleotide phosphorylase C terminal IXO1088_016230 PF10150 Ribonuclease E/G family IXO1088_016230 PF00575 S1 RNA binding domain IXO1088_016245 PF00072 Response regulator receiver domain IXO1088_016245 PF00196 Bacterial regulatory proteins, luxR family IXO1088_016260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IXO1088_016270 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IXO1088_016270 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IXO1088_016270 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IXO1088_016280 PF01648 4'-phosphopantetheinyl transferase superfamily IXO1088_016280 PF17837 4'-phosphopantetheinyl transferase N-terminal domain IXO1088_016305 PF01609 Transposase DDE domain IXO1088_016305 PF05598 Transposase domain (DUF772) IXO1088_016335 PF10414 Sirohaem synthase dimerisation region IXO1088_016335 PF14824 Sirohaem biosynthesis protein central IXO1088_016335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IXO1088_016360 PF12804 MobA-like NTP transferase domain IXO1088_016365 PF00994 Probable molybdopterin binding domain IXO1088_016365 PF03454 MoeA C-terminal region (domain IV) IXO1088_016365 PF03453 MoeA N-terminal region (domain I and II) IXO1088_016385 PF05598 Transposase domain (DUF772) IXO1088_016385 PF01609 Transposase DDE domain IXO1088_016435 PF04616 Glycosyl hydrolases family 43 IXO1088_016440 PF07532 Bacterial Ig-like domain (group 4) IXO1088_016445 PF07715 TonB-dependent Receptor Plug Domain IXO1088_016445 PF00593 TonB dependent receptor IXO1088_016455 PF09286 Pro-kumamolisin, activation domain IXO1088_016455 PF00082 Subtilase family IXO1088_016495 PF13520 Amino acid permease IXO1088_016510 PF00557 Metallopeptidase family M24 IXO1088_016510 PF01321 Creatinase/Prolidase N-terminal domain IXO1088_016515 PF00171 Aldehyde dehydrogenase family IXO1088_016520 PF00701 Dihydrodipicolinate synthetase family IXO1088_016525 PF04324 BFD-like [2Fe-2S] binding domain IXO1088_016525 PF07992 Pyridine nucleotide-disulphide oxidoreductase IXO1088_016535 PF01266 FAD dependent oxidoreductase IXO1088_016540 PF05544 Proline racemase IXO1088_016550 PF00448 SRP54-type protein, GTPase domain IXO1088_016550 PF02881 SRP54-type protein, helical bundle domain IXO1088_016565 PF00633 Helix-hairpin-helix motif IXO1088_016565 PF00730 HhH-GPD superfamily base excision DNA repair protein IXO1088_016565 PF14815 NUDIX domain IXO1088_016570 PF04362 Bacterial Fe(2+) trafficking IXO1088_016575 PF00072 Response regulator receiver domain IXO1088_016575 PF13426 PAS domain IXO1088_016575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_016585 PF05598 Transposase domain (DUF772) IXO1088_016670 PF08212 Lipocalin-like domain IXO1088_016700 PF03808 Glycosyl transferase WecB/TagA/CpsF family IXO1088_016715 PF14667 Polysaccharide biosynthesis C-terminal domain IXO1088_016725 PF00534 Glycosyl transferases group 1 IXO1088_016725 PF13439 Glycosyltransferase Family 4 IXO1088_016745 PF02397 Bacterial sugar transferase IXO1088_016765 PF13411 MerR HTH family regulatory protein IXO1088_016770 PF00216 Bacterial DNA-binding protein IXO1088_016775 PF01588 Putative tRNA binding domain IXO1088_016775 PF03147 Ferredoxin-fold anticodon binding domain IXO1088_016775 PF03484 tRNA synthetase B5 domain IXO1088_016775 PF03483 B3/4 domain IXO1088_016775 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IXO1088_016780 PF01409 tRNA synthetases class II core domain (F) IXO1088_016780 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IXO1088_016785 PF00453 Ribosomal protein L20 IXO1088_016790 PF01632 Ribosomal protein L35 IXO1088_016795 PF00707 Translation initiation factor IF-3, C-terminal domain IXO1088_016795 PF05198 Translation initiation factor IF-3, N-terminal domain IXO1088_016800 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IXO1088_016800 PF03129 Anticodon binding domain IXO1088_016800 PF02824 TGS domain IXO1088_016800 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IXO1088_016835 PF00271 Helicase conserved C-terminal domain IXO1088_016835 PF04851 Type III restriction enzyme, res subunit IXO1088_016835 PF17757 UvrB interaction domain IXO1088_016835 PF12344 Ultra-violet resistance protein B IXO1088_016835 PF02151 UvrB/uvrC motif IXO1088_016840 PF07963 Prokaryotic N-terminal methylation motif IXO1088_016840 PF00114 Pilin (bacterial filament) IXO1088_016895 PF01555 DNA methylase IXO1088_016950 PF00182 Chitinase class I IXO1088_016970 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IXO1088_017135 PF00114 Pilin (bacterial filament) IXO1088_017135 PF07963 Prokaryotic N-terminal methylation motif IXO1088_017140 PF05567 Neisseria PilC beta-propeller domain IXO1088_017160 PF07963 Prokaryotic N-terminal methylation motif IXO1088_017160 PF12019 Type II transport protein GspH IXO1088_017165 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases IXO1088_017165 PF11892 Domain of unknown function (DUF3412) IXO1088_017165 PF03641 Possible lysine decarboxylase IXO1088_017170 PF00593 TonB dependent receptor IXO1088_017180 PF01914 MarC family integral membrane protein IXO1088_017190 PF00462 Glutaredoxin IXO1088_017195 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IXO1088_017195 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IXO1088_017200 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain IXO1088_017200 PF02222 ATP-grasp domain IXO1088_017205 PF00731 AIR carboxylase IXO1088_017215 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain IXO1088_017215 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain IXO1088_017225 PF00575 S1 RNA binding domain IXO1088_017225 PF00013 KH domain IXO1088_017225 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IXO1088_017225 PF03725 3' exoribonuclease family, domain 2 IXO1088_017225 PF01138 3' exoribonuclease family, domain 1 IXO1088_017230 PF00312 Ribosomal protein S15 IXO1088_017235 PF16198 tRNA pseudouridylate synthase B C-terminal domain IXO1088_017235 PF01509 TruB family pseudouridylate synthase (N terminal domain) IXO1088_017235 PF09157 Pseudouridine synthase II TruB, C-terminal IXO1088_017240 PF02033 Ribosome-binding factor A IXO1088_017245 PF04760 Translation initiation factor IF-2, N-terminal region IXO1088_017245 PF00009 Elongation factor Tu GTP binding domain IXO1088_017245 PF11987 Translation-initiation factor 2 IXO1088_017245 PF08364 Bacterial translation initiation factor IF-2 associated region IXO1088_017250 PF08529 NusA N-terminal domain IXO1088_017250 PF00575 S1 RNA binding domain IXO1088_017250 PF13184 NusA-like KH domain IXO1088_017255 PF17384 RimP C-terminal SH3 domain IXO1088_017255 PF02576 RimP N-terminal domain IXO1088_017265 PF00361 Proton-conducting membrane transporter IXO1088_017270 PF00361 Proton-conducting membrane transporter IXO1088_017270 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus IXO1088_017275 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IXO1088_017275 PF00361 Proton-conducting membrane transporter IXO1088_017280 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IXO1088_017285 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 IXO1088_017290 PF12838 4Fe-4S dicluster domain IXO1088_017295 PF00146 NADH dehydrogenase IXO1088_017300 PF00384 Molybdopterin oxidoreductase IXO1088_017300 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IXO1088_017300 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal IXO1088_017305 PF10531 SLBB domain IXO1088_017305 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region IXO1088_017305 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IXO1088_017315 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit IXO1088_017320 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit IXO1088_017325 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IXO1088_017330 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 IXO1088_017345 PF00121 Triosephosphate isomerase IXO1088_017385 PF03707 Bacterial signalling protein N terminal repeat IXO1088_017385 PF00990 Diguanylate cyclase, GGDEF domain IXO1088_017385 PF00563 EAL domain IXO1088_017400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IXO1088_017400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IXO1088_017400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IXO1088_017400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IXO1088_017405 PF01039 Carboxyl transferase domain IXO1088_017405 PF17848 Acetyl-coA carboxylase zinc finger domain IXO1088_017415 PF00290 Tryptophan synthase alpha chain IXO1088_017425 PF00291 Pyridoxal-phosphate dependent enzyme IXO1088_017430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO1088_017430 PF03466 LysR substrate binding domain IXO1088_017435 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase IXO1088_017440 PF01416 tRNA pseudouridine synthase IXO1088_017460 PF02774 Semialdehyde dehydrogenase, dimerisation domain IXO1088_017460 PF01118 Semialdehyde dehydrogenase, NAD binding domain IXO1088_017465 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IXO1088_017465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IXO1088_017470 PF01264 Chorismate synthase IXO1088_017475 PF05175 Methyltransferase small domain IXO1088_017480 PF02630 SCO1/SenC IXO1088_017485 PF02666 Phosphatidylserine decarboxylase IXO1088_017530 PF01272 Transcription elongation factor, GreA/GreB, C-term IXO1088_017530 PF03449 Transcription elongation factor, N-terminal IXO1088_017535 PF00919 Uncharacterized protein family UPF0004 IXO1088_017535 PF18693 TRAM domain IXO1088_017535 PF04055 Radical SAM superfamily IXO1088_017555 PF05598 Transposase domain (DUF772) IXO1088_017555 PF01609 Transposase DDE domain IXO1088_017715 PF00182 Chitinase class I IXO1088_017770 PF01555 DNA methylase IXO1088_017810 PF01609 Transposase DDE domain IXO1088_017810 PF05598 Transposase domain (DUF772) IXO1088_017820 PF01738 Dienelactone hydrolase family IXO1088_017840 PF00692 dUTPase IXO1088_017845 PF10609 NUBPL iron-transfer P-loop NTPase IXO1088_017890 PF01266 FAD dependent oxidoreductase IXO1088_017895 PF04235 Protein of unknown function (DUF418) IXO1088_017900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IXO1088_017905 PF00877 NlpC/P60 family IXO1088_017910 PF00877 NlpC/P60 family IXO1088_017930 PF00375 Sodium:dicarboxylate symporter family IXO1088_017935 PF00245 Alkaline phosphatase IXO1088_017940 PF11734 TilS substrate C-terminal domain IXO1088_017940 PF09179 TilS substrate binding domain IXO1088_017940 PF01171 PP-loop family IXO1088_017945 PF02609 Exonuclease VII small subunit IXO1088_017950 PF00348 Polyprenyl synthetase IXO1088_017975 PF01523 Putative modulator of DNA gyrase IXO1088_017980 PF04751 Protein of unknown function (DUF615) IXO1088_017985 PF01523 Putative modulator of DNA gyrase IXO1088_017995 PF13502 AsmA-like C-terminal region IXO1088_017995 PF13116 Protein of unknown function IXO1088_018000 PF00575 S1 RNA binding domain IXO1088_018000 PF10150 Ribonuclease E/G family IXO1088_018005 PF02545 Maf-like protein IXO1088_018010 PF04402 Protein of unknown function (DUF541) IXO1088_018015 PF01609 Transposase DDE domain IXO1088_018015 PF05598 Transposase domain (DUF772) IXO1088_018045 PF02590 Predicted SPOUT methyltransferase IXO1088_018070 PF01467 Cytidylyltransferase-like IXO1088_018090 PF08264 Anticodon-binding domain of tRNA IXO1088_018090 PF00133 tRNA synthetases class I (I, L, M and V) IXO1088_018090 PF13603 Leucyl-tRNA synthetase, Domain 2 IXO1088_018100 PF00085 Thioredoxin IXO1088_018165 PF05598 Transposase domain (DUF772) IXO1088_018165 PF01609 Transposase DDE domain IXO1088_018190 PF00128 Alpha amylase, catalytic domain IXO1088_018190 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IXO1088_018195 PF05598 Transposase domain (DUF772) IXO1088_018195 PF01609 Transposase DDE domain IXO1088_018230 PF04717 Type VI secretion system, phage-baseplate injector IXO1088_018240 PF03626 Prokaryotic Cytochrome C oxidase subunit IV IXO1088_018245 PF00510 Cytochrome c oxidase subunit III IXO1088_018250 PF00115 Cytochrome C and Quinol oxidase polypeptide I IXO1088_018255 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IXO1088_018255 PF06481 COX Aromatic Rich Motif IXO1088_018265 PF02401 LytB protein IXO1088_018270 PF01252 Signal peptidase (SPase) II IXO1088_018275 PF00133 tRNA synthetases class I (I, L, M and V) IXO1088_018275 PF06827 Zinc finger found in FPG and IleRS IXO1088_018275 PF08264 Anticodon-binding domain of tRNA IXO1088_018280 PF06574 FAD synthetase IXO1088_018280 PF01687 Riboflavin kinase IXO1088_018285 PF03023 Lipid II flippase MurJ IXO1088_018290 PF01649 Ribosomal protein S20 IXO1088_018295 PF01926 50S ribosome-binding GTPase IXO1088_018295 PF01018 GTP1/OBG IXO1088_018300 PF01016 Ribosomal L27 protein IXO1088_018305 PF00829 Ribosomal prokaryotic L21 protein IXO1088_018310 PF00005 ABC transporter IXO1088_018310 PF17760 UvrA interaction domain IXO1088_018310 PF17755 UvrA DNA-binding domain IXO1088_018325 PF00378 Enoyl-CoA hydratase/isomerase IXO1088_018340 PF04542 Sigma-70 region 2 IXO1088_018340 PF08281 Sigma-70, region 4 IXO1088_018355 PF04377 Arginine-tRNA-protein transferase, C terminus IXO1088_018355 PF04376 Arginine-tRNA-protein transferase, N terminus IXO1088_018385 PF07715 TonB-dependent Receptor Plug Domain IXO1088_018385 PF00593 TonB dependent receptor IXO1088_018395 PF02358 Trehalose-phosphatase IXO1088_018400 PF00723 Glycosyl hydrolases family 15 IXO1088_018405 PF00982 Glycosyltransferase family 20 IXO1088_018425 PF00849 RNA pseudouridylate synthase IXO1088_018430 PF13525 Outer membrane lipoprotein IXO1088_018435 PF00795 Carbon-nitrogen hydrolase IXO1088_018435 PF02540 NAD synthase IXO1088_018445 PF00549 CoA-ligase IXO1088_018445 PF02629 CoA binding domain IXO1088_018450 PF00549 CoA-ligase IXO1088_018450 PF08442 ATP-grasp domain IXO1088_018455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_018455 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_018460 PF00072 Response regulator receiver domain IXO1088_018460 PF00158 Sigma-54 interaction domain IXO1088_018460 PF02954 Bacterial regulatory protein, Fis family IXO1088_018475 PF00437 Type II/IV secretion system protein IXO1088_018475 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IXO1088_018480 PF17284 Spermidine synthase tetramerisation domain IXO1088_018490 PF08019 Phosphoethanolamine transferase EptA/EptB IXO1088_018490 PF00884 Sulfatase IXO1088_018495 PF00114 Pilin (bacterial filament) IXO1088_018495 PF07963 Prokaryotic N-terminal methylation motif IXO1088_018500 PF00482 Type II secretion system (T2SS), protein F IXO1088_018505 PF06750 Bacterial Peptidase A24 N-terminal domain IXO1088_018505 PF01478 Type IV leader peptidase family IXO1088_018510 PF01121 Dephospho-CoA kinase IXO1088_018545 PF03527 RHS protein IXO1088_018560 PF01609 Transposase DDE domain IXO1088_018560 PF05598 Transposase domain (DUF772) IXO1088_018575 PF05598 Transposase domain (DUF772) IXO1088_018575 PF01609 Transposase DDE domain IXO1088_018610 PF00005 ABC transporter IXO1088_018610 PF00664 ABC transporter transmembrane region IXO1088_018620 PF00873 AcrB/AcrD/AcrF family IXO1088_018635 PF02321 Outer membrane efflux protein IXO1088_018640 PF00072 Response regulator receiver domain IXO1088_018640 PF00486 Transcriptional regulatory protein, C terminal IXO1088_018645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_018645 PF00672 HAMP domain IXO1088_018645 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_018650 PF00999 Sodium/hydrogen exchanger family IXO1088_018655 PF00144 Beta-lactamase IXO1088_018660 PF03737 Aldolase/RraA IXO1088_018680 PF01479 S4 domain IXO1088_018680 PF00849 RNA pseudouridylate synthase IXO1088_018685 PF08448 PAS fold IXO1088_018685 PF00990 Diguanylate cyclase, GGDEF domain IXO1088_018685 PF00563 EAL domain IXO1088_018690 PF03880 DbpA RNA binding domain IXO1088_018690 PF00270 DEAD/DEAH box helicase IXO1088_018690 PF00271 Helicase conserved C-terminal domain IXO1088_018750 PF12833 Helix-turn-helix domain IXO1088_018750 PF00730 HhH-GPD superfamily base excision DNA repair protein IXO1088_018750 PF06029 AlkA N-terminal domain IXO1088_018750 PF02805 Metal binding domain of Ada IXO1088_018755 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IXO1088_018755 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IXO1088_018765 PF00654 Voltage gated chloride channel IXO1088_018770 PF08240 Alcohol dehydrogenase GroES-like domain IXO1088_018770 PF00107 Zinc-binding dehydrogenase IXO1088_018815 PF05736 OprF membrane domain IXO1088_018815 PF00691 OmpA family IXO1088_018830 PF03441 FAD binding domain of DNA photolyase IXO1088_018830 PF00875 DNA photolyase IXO1088_018835 PF00772 DnaB-like helicase N terminal domain IXO1088_018835 PF03796 DnaB-like helicase C terminal domain IXO1088_018840 PF03358 NADPH-dependent FMN reductase IXO1088_018845 PF00733 Asparagine synthase IXO1088_018845 PF13537 Glutamine amidotransferase domain IXO1088_018850 PF13417 Glutathione S-transferase, N-terminal domain IXO1088_018885 PF01026 TatD related DNase IXO1088_018890 PF00899 ThiF family IXO1088_018905 PF00313 'Cold-shock' DNA-binding domain IXO1088_018950 PF01475 Ferric uptake regulator family IXO1088_018955 PF00749 tRNA synthetases class I (E and Q), catalytic domain IXO1088_018965 PF00795 Carbon-nitrogen hydrolase IXO1088_018980 PF01609 Transposase DDE domain IXO1088_018980 PF05598 Transposase domain (DUF772) IXO1088_019030 PF00672 HAMP domain IXO1088_019030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_019030 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_019050 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ IXO1088_019060 PF17757 UvrB interaction domain IXO1088_019060 PF03461 TRCF domain IXO1088_019060 PF00270 DEAD/DEAH box helicase IXO1088_019060 PF02559 CarD-like/TRCF domain IXO1088_019060 PF00271 Helicase conserved C-terminal domain IXO1088_019075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_019075 PF02895 Signal transducing histidine kinase, homodimeric domain IXO1088_019075 PF09078 CheY binding IXO1088_019075 PF01627 Hpt domain IXO1088_019075 PF01584 CheW-like domain IXO1088_019085 PF02203 Tar ligand binding domain homologue IXO1088_019085 PF00672 HAMP domain IXO1088_019085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXO1088_019090 PF01584 CheW-like domain IXO1088_019095 PF00563 EAL domain IXO1088_019095 PF00990 Diguanylate cyclase, GGDEF domain IXO1088_019095 PF13426 PAS domain IXO1088_019100 PF01739 CheR methyltransferase, SAM binding domain IXO1088_019100 PF03705 CheR methyltransferase, all-alpha domain IXO1088_019105 PF01339 CheB methylesterase IXO1088_019105 PF00072 Response regulator receiver domain IXO1088_019115 PF05649 Peptidase family M13 IXO1088_019115 PF01431 Peptidase family M13 IXO1088_019130 PF00300 Histidine phosphatase superfamily (branch 1) IXO1088_019135 PF04493 Endonuclease V IXO1088_019145 PF05726 Pirin C-terminal cupin domain IXO1088_019145 PF02678 Pirin IXO1088_019185 PF04717 Type VI secretion system, phage-baseplate injector IXO1088_019205 PF04717 Type VI secretion system, phage-baseplate injector IXO1088_019210 PF03781 Sulfatase-modifying factor enzyme 1 IXO1088_019260 PF04717 Type VI secretion system, phage-baseplate injector IXO1088_019275 PF00691 OmpA family IXO1088_019275 PF04972 BON domain IXO1088_019315 PF02222 ATP-grasp domain IXO1088_019340 PF00730 HhH-GPD superfamily base excision DNA repair protein IXO1088_019355 PF00072 Response regulator receiver domain IXO1088_019355 PF00196 Bacterial regulatory proteins, luxR family IXO1088_019360 PF07730 Histidine kinase IXO1088_019375 PF03775 Septum formation inhibitor MinC, C-terminal domain IXO1088_019375 PF05209 Septum formation inhibitor MinC, N-terminal domain IXO1088_019380 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IXO1088_019385 PF03776 Septum formation topological specificity factor MinE IXO1088_019395 PF08521 Two-component sensor kinase N-terminal IXO1088_019395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_019395 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_019400 PF00072 Response regulator receiver domain IXO1088_019400 PF00486 Transcriptional regulatory protein, C terminal IXO1088_019405 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase IXO1088_019415 PF08019 Phosphoethanolamine transferase EptA/EptB IXO1088_019415 PF00884 Sulfatase IXO1088_019435 PF03412 Peptidase C39 family IXO1088_019435 PF00664 ABC transporter transmembrane region IXO1088_019435 PF00005 ABC transporter IXO1088_019455 PF02347 Glycine cleavage system P-protein IXO1088_019510 PF01196 Ribosomal protein L17 IXO1088_019515 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IXO1088_019515 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IXO1088_019515 PF01000 RNA polymerase Rpb3/RpoA insert domain IXO1088_019520 PF00163 Ribosomal protein S4/S9 N-terminal domain IXO1088_019520 PF01479 S4 domain IXO1088_019525 PF00411 Ribosomal protein S11 IXO1088_019530 PF00416 Ribosomal protein S13/S18 IXO1088_019535 PF00344 SecY translocase IXO1088_019540 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IXO1088_019545 PF00327 Ribosomal protein L30p/L7e IXO1088_019550 PF00333 Ribosomal protein S5, N-terminal domain IXO1088_019550 PF03719 Ribosomal protein S5, C-terminal domain IXO1088_019555 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IXO1088_019560 PF00347 Ribosomal protein L6 IXO1088_019565 PF00410 Ribosomal protein S8 IXO1088_019570 PF00253 Ribosomal protein S14p/S29e IXO1088_019575 PF00281 Ribosomal protein L5 IXO1088_019575 PF00673 ribosomal L5P family C-terminus IXO1088_019580 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IXO1088_019580 PF00467 KOW motif IXO1088_019585 PF00238 Ribosomal protein L14p/L23e IXO1088_019590 PF00366 Ribosomal protein S17 IXO1088_019595 PF00831 Ribosomal L29 protein IXO1088_019600 PF00252 Ribosomal protein L16p/L10e IXO1088_019605 PF07650 KH domain IXO1088_019605 PF00189 Ribosomal protein S3, C-terminal domain IXO1088_019610 PF00237 Ribosomal protein L22p/L17e IXO1088_019615 PF00203 Ribosomal protein S19 IXO1088_019620 PF03947 Ribosomal Proteins L2, C-terminal domain IXO1088_019620 PF00181 Ribosomal Proteins L2, RNA binding domain IXO1088_019625 PF00276 Ribosomal protein L23 IXO1088_019630 PF00573 Ribosomal protein L4/L1 family IXO1088_019635 PF00297 Ribosomal protein L3 IXO1088_019640 PF00338 Ribosomal protein S10p/S20e IXO1088_019650 PF03144 Elongation factor Tu domain 2 IXO1088_019650 PF03143 Elongation factor Tu C-terminal domain IXO1088_019650 PF00009 Elongation factor Tu GTP binding domain IXO1088_019655 PF00679 Elongation factor G C-terminus IXO1088_019655 PF00009 Elongation factor Tu GTP binding domain IXO1088_019655 PF14492 Elongation Factor G, domain II IXO1088_019655 PF03764 Elongation factor G, domain IV IXO1088_019655 PF03144 Elongation factor Tu domain 2 IXO1088_019660 PF00177 Ribosomal protein S7p/S5e IXO1088_019665 PF00164 Ribosomal protein S12/S23 IXO1088_019670 PF05000 RNA polymerase Rpb1, domain 4 IXO1088_019670 PF04997 RNA polymerase Rpb1, domain 1 IXO1088_019670 PF00623 RNA polymerase Rpb1, domain 2 IXO1088_019670 PF04983 RNA polymerase Rpb1, domain 3 IXO1088_019670 PF04998 RNA polymerase Rpb1, domain 5 IXO1088_019675 PF04560 RNA polymerase Rpb2, domain 7 IXO1088_019675 PF10385 RNA polymerase beta subunit external 1 domain IXO1088_019675 PF04561 RNA polymerase Rpb2, domain 2 IXO1088_019675 PF00562 RNA polymerase Rpb2, domain 6 IXO1088_019675 PF04565 RNA polymerase Rpb2, domain 3 IXO1088_019675 PF04563 RNA polymerase beta subunit IXO1088_019680 PF16320 Ribosomal protein L7/L12 dimerisation domain IXO1088_019680 PF00542 Ribosomal protein L7/L12 C-terminal domain IXO1088_019685 PF00466 Ribosomal protein L10 IXO1088_019690 PF00687 Ribosomal protein L1p/L10e family IXO1088_019695 PF00298 Ribosomal protein L11, RNA binding domain IXO1088_019695 PF03946 Ribosomal protein L11, N-terminal domain IXO1088_019705 PF00467 KOW motif IXO1088_019705 PF02357 Transcription termination factor nusG IXO1088_019710 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IXO1088_019720 PF00009 Elongation factor Tu GTP binding domain IXO1088_019720 PF03144 Elongation factor Tu domain 2 IXO1088_019720 PF03143 Elongation factor Tu C-terminal domain IXO1088_019740 PF06071 Protein of unknown function (DUF933) IXO1088_019740 PF01926 50S ribosome-binding GTPase IXO1088_019745 PF01195 Peptidyl-tRNA hydrolase IXO1088_019750 PF14693 Ribosomal protein TL5, C-terminal domain IXO1088_019750 PF01386 Ribosomal L25p family IXO1088_019755 PF14572 Phosphoribosyl synthetase-associated domain IXO1088_019755 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IXO1088_019765 PF08544 GHMP kinases C terminal IXO1088_019765 PF00288 GHMP kinases N terminal domain IXO1088_019770 PF03550 Outer membrane lipoprotein LolB IXO1088_019780 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain IXO1088_019780 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain IXO1088_019780 PF01488 Shikimate / quinate 5-dehydrogenase IXO1088_019785 PF03462 PCRF domain IXO1088_019785 PF00472 RF-1 domain IXO1088_019795 PF00994 Probable molybdopterin binding domain IXO1088_019800 PF03976 Polyphosphate kinase 2 (PPK2) IXO1088_019810 PF00708 Acylphosphatase IXO1088_019815 PF08534 Redoxin IXO1088_019820 PF03631 Virulence factor BrkB IXO1088_019825 PF03358 NADPH-dependent FMN reductase IXO1088_019840 PF17189 Glycosyl hydrolase family 30 beta sandwich domain IXO1088_019840 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain IXO1088_019850 PF04073 Aminoacyl-tRNA editing domain IXO1088_019855 PF00082 Subtilase family IXO1088_019855 PF04151 Bacterial pre-peptidase C-terminal domain IXO1088_019870 PF01063 Amino-transferase class IV IXO1088_019900 PF02233 NAD(P) transhydrogenase beta subunit IXO1088_019905 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch IXO1088_019925 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IXO1088_019925 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IXO1088_019925 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch IXO1088_019940 PF00476 DNA polymerase family A IXO1088_019940 PF01612 3'-5' exonuclease IXO1088_019940 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IXO1088_019940 PF01367 5'-3' exonuclease, C-terminal SAM fold IXO1088_019945 PF00293 NUDIX domain IXO1088_019955 PF00561 alpha/beta hydrolase fold IXO1088_019980 PF17827 PrmC N-terminal domain IXO1088_019980 PF05175 Methyltransferase small domain IXO1088_019985 PF10417 C-terminal domain of 1-Cys peroxiredoxin IXO1088_019985 PF00578 AhpC/TSA family IXO1088_019990 PF13192 Thioredoxin domain IXO1088_019990 PF07992 Pyridine nucleotide-disulphide oxidoreductase IXO1088_019995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO1088_019995 PF03466 LysR substrate binding domain IXO1088_020005 PF03449 Transcription elongation factor, N-terminal IXO1088_020005 PF01272 Transcription elongation factor, GreA/GreB, C-term IXO1088_020010 PF00923 Transaldolase/Fructose-6-phosphate aldolase IXO1088_020040 PF01625 Peptide methionine sulfoxide reductase IXO1088_020060 PF00072 Response regulator receiver domain IXO1088_020060 PF00196 Bacterial regulatory proteins, luxR family IXO1088_020085 PF00072 Response regulator receiver domain IXO1088_020085 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_020085 PF01627 Hpt domain IXO1088_020085 PF17149 Periplasmic sensor domain found in signal transduction proteins IXO1088_020085 PF00672 HAMP domain IXO1088_020085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_020090 PF00990 Diguanylate cyclase, GGDEF domain IXO1088_020090 PF00072 Response regulator receiver domain IXO1088_020110 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain IXO1088_020110 PF00749 tRNA synthetases class I (E and Q), catalytic domain IXO1088_020165 PF18125 RlmM ferredoxin-like domain IXO1088_020165 PF01728 FtsJ-like methyltransferase IXO1088_020170 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IXO1088_020170 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IXO1088_020175 PF08450 SMP-30/Gluconolactonase/LRE-like region IXO1088_020195 PF00378 Enoyl-CoA hydratase/isomerase IXO1088_020200 PF00171 Aldehyde dehydrogenase family IXO1088_020205 PF00501 AMP-binding enzyme IXO1088_020205 PF13193 AMP-binding enzyme C-terminal domain IXO1088_020210 PF03466 LysR substrate binding domain IXO1088_020210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO1088_020220 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IXO1088_020250 PF01494 FAD binding domain IXO1088_020255 PF01494 FAD binding domain IXO1088_020265 PF01923 Cobalamin adenosyltransferase IXO1088_020270 PF00850 Histone deacetylase domain IXO1088_020275 PF03968 OstA-like protein IXO1088_020275 PF04453 LPS transport system D IXO1088_020280 PF00639 PPIC-type PPIASE domain IXO1088_020280 PF09312 SurA N-terminal domain IXO1088_020285 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IXO1088_020295 PF00398 Ribosomal RNA adenine dimethylase IXO1088_020300 PF04379 ApaG domain IXO1088_020305 PF00149 Calcineurin-like phosphoesterase IXO1088_020310 PF00186 Dihydrofolate reductase IXO1088_020325 PF00303 Thymidylate synthase IXO1088_020330 PF01790 Prolipoprotein diacylglyceryl transferase IXO1088_020350 PF01219 Prokaryotic diacylglycerol kinase IXO1088_020375 PF08521 Two-component sensor kinase N-terminal IXO1088_020375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_020375 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_020380 PF00486 Transcriptional regulatory protein, C terminal IXO1088_020380 PF00072 Response regulator receiver domain IXO1088_020385 PF13472 GDSL-like Lipase/Acylhydrolase family IXO1088_020390 PF00005 ABC transporter IXO1088_020400 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IXO1088_020450 PF00248 Aldo/keto reductase family IXO1088_020460 PF07670 Nucleoside recognition IXO1088_020460 PF07662 Na+ dependent nucleoside transporter C-terminus IXO1088_020460 PF01773 Na+ dependent nucleoside transporter N-terminus IXO1088_020465 PF00294 pfkB family carbohydrate kinase IXO1088_020480 PF01207 Dihydrouridine synthase (Dus) IXO1088_020495 PF02773 S-adenosylmethionine synthetase, C-terminal domain IXO1088_020495 PF02772 S-adenosylmethionine synthetase, central domain IXO1088_020495 PF00438 S-adenosylmethionine synthetase, N-terminal domain IXO1088_020500 PF00328 Histidine phosphatase superfamily (branch 2) IXO1088_020525 PF00311 Phosphoenolpyruvate carboxylase IXO1088_020535 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IXO1088_020535 PF05221 S-adenosyl-L-homocysteine hydrolase IXO1088_020540 PF13649 Methyltransferase domain IXO1088_020575 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IXO1088_020590 PF00082 Subtilase family IXO1088_020590 PF09286 Pro-kumamolisin, activation domain IXO1088_020595 PF14765 Polyketide synthase dehydratase IXO1088_020595 PF08240 Alcohol dehydrogenase GroES-like domain IXO1088_020595 PF00550 Phosphopantetheine attachment site IXO1088_020595 PF08659 KR domain IXO1088_020595 PF00109 Beta-ketoacyl synthase, N-terminal domain IXO1088_020595 PF16197 Ketoacyl-synthetase C-terminal extension IXO1088_020595 PF00107 Zinc-binding dehydrogenase IXO1088_020595 PF00698 Acyl transferase domain IXO1088_020595 PF02801 Beta-ketoacyl synthase, C-terminal domain IXO1088_020610 PF02219 Methylenetetrahydrofolate reductase IXO1088_020625 PF00293 NUDIX domain IXO1088_020635 PF02810 SEC-C motif IXO1088_020635 PF07517 SecA DEAD-like domain IXO1088_020635 PF07516 SecA Wing and Scaffold domain IXO1088_020635 PF01043 SecA preprotein cross-linking domain IXO1088_020640 PF01476 LysM domain IXO1088_020640 PF01551 Peptidase family M23 IXO1088_020650 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase IXO1088_020655 PF00091 Tubulin/FtsZ family, GTPase domain IXO1088_020655 PF12327 FtsZ family, C-terminal domain IXO1088_020660 PF02491 SHS2 domain inserted in FTSA IXO1088_020665 PF08478 POTRA domain, FtsQ-type IXO1088_020665 PF03799 Cell division protein FtsQ IXO1088_020670 PF01820 D-ala D-ala ligase N-terminus IXO1088_020670 PF07478 D-ala D-ala ligase C-terminus IXO1088_020675 PF02875 Mur ligase family, glutamate ligase domain IXO1088_020675 PF08245 Mur ligase middle domain IXO1088_020675 PF01225 Mur ligase family, catalytic domain IXO1088_020680 PF03033 Glycosyltransferase family 28 N-terminal domain IXO1088_020680 PF04101 Glycosyltransferase family 28 C-terminal domain IXO1088_020685 PF01098 Cell cycle protein IXO1088_020690 PF00953 Glycosyl transferase family 4 IXO1088_020695 PF01225 Mur ligase family, catalytic domain IXO1088_020695 PF08245 Mur ligase middle domain IXO1088_020695 PF02875 Mur ligase family, glutamate ligase domain IXO1088_020700 PF02875 Mur ligase family, glutamate ligase domain IXO1088_020700 PF01225 Mur ligase family, catalytic domain IXO1088_020700 PF08245 Mur ligase middle domain IXO1088_020705 PF03717 Penicillin-binding Protein dimerisation domain IXO1088_020705 PF00905 Penicillin binding protein transpeptidase domain IXO1088_020710 PF04999 Cell division protein FtsL IXO1088_020715 PF01795 MraW methylase family IXO1088_020720 PF02381 MraZ protein, putative antitoxin-like IXO1088_020740 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IXO1088_020750 PF02021 Uncharacterised protein family UPF0102 IXO1088_020755 PF04307 LexA-binding, inner membrane-associated putative hydrolase IXO1088_020760 PF02913 FAD linked oxidases, C-terminal domain IXO1088_020760 PF01565 FAD binding domain IXO1088_020765 PF00486 Transcriptional regulatory protein, C terminal IXO1088_020765 PF00072 Response regulator receiver domain IXO1088_020770 PF13493 Domain of unknown function (DUF4118) IXO1088_020770 PF02702 Osmosensitive K+ channel His kinase sensor domain IXO1088_020770 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_020770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_020770 PF13492 GAF domain IXO1088_020775 PF02669 K+-transporting ATPase, c chain IXO1088_020785 PF03814 Potassium-transporting ATPase A subunit IXO1088_020810 PF00586 AIR synthase related protein, N-terminal domain IXO1088_020810 PF02769 AIR synthase related protein, C-terminal domain IXO1088_020815 PF01029 NusB family IXO1088_020820 PF00885 6,7-dimethyl-8-ribityllumazine synthase IXO1088_020825 PF00925 GTP cyclohydrolase II IXO1088_020825 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IXO1088_020830 PF00677 Lumazine binding domain IXO1088_020840 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IXO1088_020840 PF01872 RibD C-terminal domain IXO1088_020850 PF03477 ATP cone domain IXO1088_020860 PF00464 Serine hydroxymethyltransferase IXO1088_020880 PF12848 ABC transporter IXO1088_020880 PF00005 ABC transporter IXO1088_020900 PF00756 Putative esterase IXO1088_020910 PF08240 Alcohol dehydrogenase GroES-like domain IXO1088_020910 PF00107 Zinc-binding dehydrogenase IXO1088_020915 PF02583 Metal-sensitive transcriptional repressor IXO1088_020930 PF00486 Transcriptional regulatory protein, C terminal IXO1088_020930 PF00072 Response regulator receiver domain IXO1088_020935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_020935 PF16527 Two-component sensor protein CpxA, periplasmic domain IXO1088_020935 PF00672 HAMP domain IXO1088_020935 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_020970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_020970 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_020970 PF00672 HAMP domain IXO1088_020975 PF04107 Glutamate-cysteine ligase family 2(GCS2) IXO1088_020985 PF01926 50S ribosome-binding GTPase IXO1088_020990 PF00034 Cytochrome c IXO1088_021020 PF01527 Transposase IXO1088_021050 PF01743 Poly A polymerase head domain IXO1088_021050 PF12627 Probable RNA and SrmB- binding site of polymerase A IXO1088_021050 PF01966 HD domain IXO1088_021120 PF01522 Polysaccharide deacetylase IXO1088_021120 PF14883 Hypothetical glycosyl hydrolase family 13 IXO1088_021125 PF00535 Glycosyl transferase family 2 IXO1088_021135 PF01979 Amidohydrolase family IXO1088_021140 PF01380 SIS domain IXO1088_021145 PF00356 Bacterial regulatory proteins, lacI family IXO1088_021150 PF07690 Major Facilitator Superfamily IXO1088_021155 PF07702 UTRA domain IXO1088_021155 PF00392 Bacterial regulatory proteins, gntR family IXO1088_021170 PF02836 Glycosyl hydrolases family 2, TIM barrel domain IXO1088_021170 PF16355 Domain of unknown function (DUF4982) IXO1088_021170 PF00703 Glycosyl hydrolases family 2 IXO1088_021170 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 IXO1088_021170 PF02837 Glycosyl hydrolases family 2, sugar binding domain IXO1088_021220 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IXO1088_021225 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_021225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_021230 PF00072 Response regulator receiver domain IXO1088_021235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_021235 PF08446 PAS fold IXO1088_021235 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_021235 PF01590 GAF domain IXO1088_021235 PF00360 Phytochrome region IXO1088_021240 PF04972 BON domain IXO1088_021245 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IXO1088_021245 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IXO1088_021250 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IXO1088_021250 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain IXO1088_021285 PF01467 Cytidylyltransferase-like IXO1088_021285 PF00293 NUDIX domain IXO1088_021295 PF17804 Tail specific protease N-terminal domain IXO1088_021295 PF03572 Peptidase family S41 IXO1088_021295 PF00595 PDZ domain IXO1088_021295 PF11818 C-terminal domain of tail specific protease (DUF3340) IXO1088_021300 PF04055 Radical SAM superfamily IXO1088_021300 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family IXO1088_021305 PF03099 Biotin/lipoate A/B protein ligase family IXO1088_021310 PF04359 Protein of unknown function (DUF493) IXO1088_021325 PF00768 D-alanyl-D-alanine carboxypeptidase IXO1088_021325 PF07943 Penicillin-binding protein 5, C-terminal domain IXO1088_021330 PF05036 Sporulation related domain IXO1088_021330 PF03330 Lytic transglycolase IXO1088_021335 PF13406 Transglycosylase SLT domain IXO1088_021355 PF01098 Cell cycle protein IXO1088_021360 PF00905 Penicillin binding protein transpeptidase domain IXO1088_021360 PF03717 Penicillin-binding Protein dimerisation domain IXO1088_021370 PF04085 rod shape-determining protein MreC IXO1088_021380 PF00294 pfkB family carbohydrate kinase IXO1088_021400 PF13673 Acetyltransferase (GNAT) domain IXO1088_021410 PF13533 Biotin-lipoyl like IXO1088_021420 PF01209 ubiE/COQ5 methyltransferase family IXO1088_021425 PF17152 Periplasmic sensor domain IXO1088_021425 PF00990 Diguanylate cyclase, GGDEF domain IXO1088_021430 PF11838 ERAP1-like C-terminal domain IXO1088_021430 PF01433 Peptidase family M1 domain IXO1088_021445 PF10431 C-terminal, D2-small domain, of ClpB protein IXO1088_021445 PF07724 AAA domain (Cdc48 subfamily) IXO1088_021445 PF00004 ATPase family associated with various cellular activities (AAA) IXO1088_021450 PF00227 Proteasome subunit IXO1088_021460 PF00589 Phage integrase family IXO1088_021460 PF02899 Phage integrase, N-terminal SAM-like domain IXO1088_021470 PF01678 Diaminopimelate epimerase IXO1088_021485 PF00326 Prolyl oligopeptidase family IXO1088_021485 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain IXO1088_021490 PF00155 Aminotransferase class I and II IXO1088_021505 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain IXO1088_021505 PF00326 Prolyl oligopeptidase family IXO1088_021530 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain IXO1088_021530 PF03900 Porphobilinogen deaminase, C-terminal domain IXO1088_021535 PF00072 Response regulator receiver domain IXO1088_021535 PF04397 LytTr DNA-binding domain IXO1088_021540 PF06580 Histidine kinase IXO1088_021540 PF07694 5TMR of 5TMR-LYT IXO1088_021550 PF13632 Glycosyl transferase family group 2 IXO1088_021595 PF00916 Sulfate permease family IXO1088_021595 PF01740 STAS domain IXO1088_021600 PF00150 Cellulase (glycosyl hydrolase family 5) IXO1088_021600 PF00553 Cellulose binding domain IXO1088_021610 PF02203 Tar ligand binding domain homologue IXO1088_021610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXO1088_021610 PF00672 HAMP domain IXO1088_021620 PF03707 Bacterial signalling protein N terminal repeat IXO1088_021620 PF00990 Diguanylate cyclase, GGDEF domain IXO1088_021620 PF00563 EAL domain IXO1088_021660 PF01204 Trehalase IXO1088_021670 PF05598 Transposase domain (DUF772) IXO1088_021670 PF01609 Transposase DDE domain IXO1088_021690 PF01544 CorA-like Mg2+ transporter protein IXO1088_021700 PF00324 Amino acid permease IXO1088_021710 PF00553 Cellulose binding domain IXO1088_021710 PF00041 Fibronectin type III domain IXO1088_021710 PF01341 Glycosyl hydrolases family 6 IXO1088_021715 PF03330 Lytic transglycolase IXO1088_021720 PF00892 EamA-like transporter family IXO1088_021740 PF07759 Protein of unknown function (DUF1615) IXO1088_021780 PF00106 short chain dehydrogenase IXO1088_021800 PF00425 chorismate binding enzyme IXO1088_021800 PF04715 Anthranilate synthase component I, N terminal region IXO1088_021805 PF00781 Diacylglycerol kinase catalytic domain IXO1088_021810 PF00583 Acetyltransferase (GNAT) family IXO1088_021815 PF00834 Ribulose-phosphate 3 epimerase family IXO1088_021820 PF05099 Tellurite resistance protein TerB IXO1088_021820 PF00226 DnaJ domain IXO1088_021825 PF01259 SAICAR synthetase IXO1088_021865 PF13244 Domain of unknown function (DUF4040) IXO1088_021865 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter IXO1088_021865 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IXO1088_021865 PF00361 Proton-conducting membrane transporter IXO1088_021870 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IXO1088_021875 PF00361 Proton-conducting membrane transporter IXO1088_021885 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) IXO1088_021890 PF03334 Na+/H+ antiporter subunit IXO1088_021910 PF05598 Transposase domain (DUF772) IXO1088_021910 PF01609 Transposase DDE domain IXO1088_021915 PF04209 homogentisate 1,2-dioxygenase IXO1088_021920 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IXO1088_021925 PF01047 MarR family IXO1088_021935 PF00854 POT family IXO1088_021940 PF03301 Tryptophan 2,3-dioxygenase IXO1088_021950 PF00676 Dehydrogenase E1 component IXO1088_021985 PF00108 Thiolase, N-terminal domain IXO1088_021985 PF02803 Thiolase, C-terminal domain IXO1088_022060 PF01427 D-ala-D-ala dipeptidase IXO1088_022065 PF01510 N-acetylmuramoyl-L-alanine amidase IXO1088_022075 PF13378 Enolase C-terminal domain-like IXO1088_022075 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IXO1088_022105 PF13520 Amino acid permease IXO1088_022130 PF05360 yiaA/B two helix domain IXO1088_022135 PF07995 Glucose / Sorbosone dehydrogenase IXO1088_022190 PF01915 Glycosyl hydrolase family 3 C-terminal domain IXO1088_022190 PF14310 Fibronectin type III-like domain IXO1088_022190 PF00933 Glycosyl hydrolase family 3 N terminal domain IXO1088_022195 PF02152 Dihydroneopterin aldolase IXO1088_022200 PF00814 Glycoprotease family IXO1088_022205 PF01165 Ribosomal protein S21 IXO1088_022210 PF09424 Yqey-like protein IXO1088_022230 PF03631 Virulence factor BrkB IXO1088_022235 PF10410 DnaB-helicase binding domain of primase IXO1088_022235 PF08278 DNA primase DnaG DnaB-binding IXO1088_022235 PF08275 DNA primase catalytic core, N-terminal domain IXO1088_022235 PF01807 CHC2 zinc finger IXO1088_022280 PF01609 Transposase DDE domain IXO1088_022280 PF05598 Transposase domain (DUF772) IXO1088_022285 PF07715 TonB-dependent Receptor Plug Domain IXO1088_022285 PF00593 TonB dependent receptor IXO1088_022300 PF00005 ABC transporter IXO1088_022335 PF00145 C-5 cytosine-specific DNA methylase IXO1088_022340 PF03852 DNA mismatch endonuclease Vsr IXO1088_022370 PF04610 TrbL/VirB6 plasmid conjugal transfer protein IXO1088_022385 PF07996 Type IV secretion system proteins IXO1088_022410 PF00589 Phage integrase family IXO1088_022430 PF00140 Sigma-70 factor, region 1.2 IXO1088_022430 PF04545 Sigma-70, region 4 IXO1088_022430 PF03979 Sigma-70 factor, region 1.1 IXO1088_022430 PF04546 Sigma-70, non-essential region IXO1088_022430 PF04539 Sigma-70 region 3 IXO1088_022430 PF04542 Sigma-70 region 2 IXO1088_022435 PF02580 D-Tyr-tRNA(Tyr) deacylase IXO1088_022440 PF03279 Bacterial lipid A biosynthesis acyltransferase IXO1088_022455 PF00925 GTP cyclohydrolase II IXO1088_022475 PF00535 Glycosyl transferase family 2 IXO1088_022490 PF01189 16S rRNA methyltransferase RsmB/F IXO1088_022490 PF01029 NusB family IXO1088_022495 PF00551 Formyl transferase IXO1088_022495 PF02911 Formyl transferase, C-terminal domain IXO1088_022500 PF01327 Polypeptide deformylase IXO1088_022505 PF01476 LysM domain IXO1088_022510 PF02481 DNA recombination-mediator protein A IXO1088_022510 PF17782 DprA winged helix domain IXO1088_022515 PF04361 Protein of unknown function (DUF494) IXO1088_022520 PF00114 Pilin (bacterial filament) IXO1088_022520 PF07963 Prokaryotic N-terminal methylation motif IXO1088_022530 PF01751 Toprim domain IXO1088_022530 PF13368 Topoisomerase C-terminal repeat IXO1088_022530 PF01131 DNA topoisomerase IXO1088_022535 PF01300 Telomere recombination IXO1088_022560 PF01343 Peptidase family S49 IXO1088_022565 PF01554 MatE IXO1088_022590 PF00270 DEAD/DEAH box helicase IXO1088_022590 PF17764 3′ DNA-binding domain (3′BD) IXO1088_022590 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IXO1088_022590 PF00271 Helicase conserved C-terminal domain IXO1088_022590 PF18074 Primosomal protein N C-terminal domain IXO1088_022625 PF03091 CutA1 divalent ion tolerance protein IXO1088_022630 PF02683 Cytochrome C biogenesis protein transmembrane region IXO1088_022630 PF11412 Disulphide bond corrector protein DsbC IXO1088_022645 PF01220 Dehydroquinase class II IXO1088_022650 PF00364 Biotin-requiring enzyme IXO1088_022660 PF02785 Biotin carboxylase C-terminal domain IXO1088_022660 PF00289 Biotin carboxylase, N-terminal domain IXO1088_022660 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IXO1088_022705 PF01381 Helix-turn-helix IXO1088_022720 PF02954 Bacterial regulatory protein, Fis family IXO1088_022775 PF08845 Toxin SymE, type I toxin-antitoxin system IXO1088_022790 PF05594 Haemagluttinin repeat IXO1088_022790 PF04829 Pre-toxin domain with VENN motif IXO1088_022790 PF13332 Hemagglutinin repeat IXO1088_022820 PF08845 Toxin SymE, type I toxin-antitoxin system IXO1088_022830 PF04829 Pre-toxin domain with VENN motif IXO1088_022830 PF05860 haemagglutination activity domain IXO1088_022830 PF13332 Hemagglutinin repeat IXO1088_022830 PF13018 Extended Signal Peptide of Type V secretion system IXO1088_022835 PF08479 POTRA domain, ShlB-type IXO1088_022835 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB IXO1088_022835 PF17287 POTRA domain IXO1088_022850 PF00818 Ice nucleation protein repeat IXO1088_022865 PF12147 Putative methyltransferase IXO1088_022865 PF12146 Serine aminopeptidase, S33 IXO1088_022875 PF12147 Putative methyltransferase IXO1088_022875 PF12146 Serine aminopeptidase, S33 IXO1088_022885 PF01808 AICARFT/IMPCHase bienzyme IXO1088_022885 PF02142 MGS-like domain IXO1088_022890 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system IXO1088_022900 PF02844 Phosphoribosylglycinamide synthetase, N domain IXO1088_022900 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IXO1088_022900 PF02843 Phosphoribosylglycinamide synthetase, C domain IXO1088_022920 PF12805 FUSC-like inner membrane protein yccS IXO1088_022935 PF07690 Major Facilitator Superfamily IXO1088_022960 PF03186 CobD/Cbib protein IXO1088_022960 PF17113 Regulatory signalling modulator protein AmpE IXO1088_022965 PF00293 NUDIX domain IXO1088_022965 PF09297 NADH pyrophosphatase zinc ribbon domain IXO1088_022965 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain IXO1088_022975 PF01521 Iron-sulphur cluster biosynthesis IXO1088_022995 PF00072 Response regulator receiver domain IXO1088_022995 PF00486 Transcriptional regulatory protein, C terminal IXO1088_023000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_023000 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_023000 PF00672 HAMP domain IXO1088_023000 PF01627 Hpt domain IXO1088_023000 PF00072 Response regulator receiver domain IXO1088_023000 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IXO1088_023040 PF00579 tRNA synthetases class I (W and Y) IXO1088_023045 PF04225 Opacity-associated protein A LysM-like domain IXO1088_023045 PF01551 Peptidase family M23 IXO1088_023055 PF03702 Anhydro-N-acetylmuramic acid kinase IXO1088_023065 PF07690 Major Facilitator Superfamily IXO1088_023070 PF03372 Endonuclease/Exonuclease/phosphatase family IXO1088_023075 PF00156 Phosphoribosyl transferase domain IXO1088_023085 PF13614 AAA domain IXO1088_023090 PF02195 ParB-like nuclease domain IXO1088_023090 PF17762 HTH domain found in ParB protein IXO1088_023100 PF01370 NAD dependent epimerase/dehydratase family IXO1088_023105 PF00535 Glycosyl transferase family 2 IXO1088_023120 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IXO1088_023120 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IXO1088_023120 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IXO1088_023120 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IXO1088_023125 PF00692 dUTPase IXO1088_023130 PF04127 DNA / pantothenate metabolism flavoprotein IXO1088_023130 PF02441 Flavoprotein IXO1088_023135 PF04002 RadC-like JAB domain IXO1088_023140 PF03485 Arginyl tRNA synthetase N terminal domain IXO1088_023140 PF05746 DALR anticodon binding domain IXO1088_023140 PF00750 tRNA synthetases class I (R) IXO1088_023155 PF00106 short chain dehydrogenase IXO1088_023180 PF02627 Carboxymuconolactone decarboxylase family IXO1088_023185 PF12146 Serine aminopeptidase, S33 IXO1088_023190 PF10397 Adenylosuccinate lyase C-terminus IXO1088_023190 PF00206 Lyase IXO1088_023205 PF00775 Dioxygenase IXO1088_023205 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal IXO1088_023210 PF02803 Thiolase, C-terminal domain IXO1088_023210 PF00108 Thiolase, N-terminal domain IXO1088_023245 PF00268 Ribonucleotide reductase, small chain IXO1088_023255 PF02867 Ribonucleotide reductase, barrel domain IXO1088_023255 PF03477 ATP cone domain IXO1088_023255 PF00317 Ribonucleotide reductase, all-alpha domain IXO1088_023270 PF00583 Acetyltransferase (GNAT) family IXO1088_023270 PF13607 Succinyl-CoA ligase like flavodoxin domain IXO1088_023270 PF13380 CoA binding domain IXO1088_023280 PF01769 Divalent cation transporter IXO1088_023280 PF03448 MgtE intracellular N domain IXO1088_023280 PF00571 CBS domain IXO1088_023285 PF00999 Sodium/hydrogen exchanger family IXO1088_023285 PF02254 TrkA-N domain IXO1088_023295 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain IXO1088_023295 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain IXO1088_023315 PF05166 YcgL domain IXO1088_023320 PF02801 Beta-ketoacyl synthase, C-terminal domain IXO1088_023320 PF00109 Beta-ketoacyl synthase, N-terminal domain IXO1088_023330 PF00535 Glycosyl transferase family 2 IXO1088_023360 PF00155 Aminotransferase class I and II IXO1088_023365 PF04055 Radical SAM superfamily IXO1088_023365 PF06968 Biotin and Thiamin Synthesis associated domain IXO1088_023375 PF01040 UbiA prenyltransferase family IXO1088_023390 PF00589 Phage integrase family IXO1088_023390 PF13356 Arm DNA-binding domain IXO1088_023450 PF00004 ATPase family associated with various cellular activities (AAA) IXO1088_023470 PF01594 AI-2E family transporter IXO1088_023480 PF02789 Cytosol aminopeptidase family, N-terminal domain IXO1088_023480 PF00883 Cytosol aminopeptidase family, catalytic domain IXO1088_023490 PF04542 Sigma-70 region 2 IXO1088_023490 PF08281 Sigma-70, region 4 IXO1088_023495 PF00199 Catalase IXO1088_023515 PF00892 EamA-like transporter family IXO1088_023550 PF00753 Metallo-beta-lactamase superfamily IXO1088_023555 PF00579 tRNA synthetases class I (W and Y) IXO1088_023560 PF05532 CsbD-like IXO1088_023575 PF00491 Arginase family IXO1088_023600 PF02223 Thymidylate kinase IXO1088_023615 PF03309 Type III pantothenate kinase IXO1088_023620 PF08279 HTH domain IXO1088_023620 PF03099 Biotin/lipoate A/B protein ligase family IXO1088_023620 PF02237 Biotin protein ligase C terminal domain IXO1088_023645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_023645 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_023645 PF00672 HAMP domain IXO1088_023650 PF00072 Response regulator receiver domain IXO1088_023650 PF00486 Transcriptional regulatory protein, C terminal IXO1088_023660 PF01207 Dihydrouridine synthase (Dus) IXO1088_023685 PF00199 Catalase IXO1088_023685 PF06628 Catalase-related immune-responsive IXO1088_023690 PF13533 Biotin-lipoyl like IXO1088_023710 PF06733 DEAD_2 IXO1088_023710 PF13307 Helicase C-terminal domain IXO1088_023720 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IXO1088_023720 PF01488 Shikimate / quinate 5-dehydrogenase IXO1088_023720 PF08501 Shikimate dehydrogenase substrate binding domain IXO1088_023735 PF00258 Flavodoxin IXO1088_023735 PF00667 FAD binding domain IXO1088_023735 PF00175 Oxidoreductase NAD-binding domain IXO1088_023745 PF03466 LysR substrate binding domain IXO1088_023745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO1088_023760 PF00490 Delta-aminolevulinic acid dehydratase IXO1088_023785 PF00326 Prolyl oligopeptidase family IXO1088_023785 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region IXO1088_023795 PF00043 Glutathione S-transferase, C-terminal domain IXO1088_023795 PF02798 Glutathione S-transferase, N-terminal domain IXO1088_023815 PF04820 Tryptophan halogenase IXO1088_023830 PF00005 ABC transporter IXO1088_023840 PF01381 Helix-turn-helix IXO1088_023850 PF02583 Metal-sensitive transcriptional repressor IXO1088_023855 PF01545 Cation efflux family IXO1088_023860 PF00111 2Fe-2S iron-sulfur cluster binding domain IXO1088_023860 PF00970 Oxidoreductase FAD-binding domain IXO1088_023860 PF00175 Oxidoreductase NAD-binding domain IXO1088_023865 PF00005 ABC transporter IXO1088_023870 PF01061 ABC-2 type transporter IXO1088_023970 PF07478 D-ala D-ala ligase C-terminus IXO1088_023970 PF01820 D-ala D-ala ligase N-terminus IXO1088_023985 PF03109 ABC1 family IXO1088_023995 PF00849 RNA pseudouridylate synthase IXO1088_024005 PF00472 RF-1 domain IXO1088_024025 PF01432 Peptidase family M3 IXO1088_024055 PF05336 L-rhamnose mutarotase IXO1088_024060 PF07690 Major Facilitator Superfamily IXO1088_024065 PF09339 IclR helix-turn-helix domain IXO1088_024065 PF01614 Bacterial transcriptional regulator IXO1088_024075 PF02659 Putative manganese efflux pump IXO1088_024080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO1088_024080 PF00512 His Kinase A (phospho-acceptor) domain IXO1088_024090 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain IXO1088_024090 PF06165 Glycosyltransferase family 36 IXO1088_024110 PF13570 PQQ-like domain IXO1088_024110 PF01011 PQQ enzyme repeat IXO1088_024110 PF13360 PQQ-like domain IXO1088_024150 PF01609 Transposase DDE domain IXO1088_024150 PF05598 Transposase domain (DUF772) IXO1088_024215 PF00005 ABC transporter IXO1088_024220 PF02405 Permease MlaE IXO1088_024225 PF02470 MlaD protein IXO1088_024230 PF05494 MlaC protein IXO1088_024240 PF04333 MlaA lipoprotein IXO1088_024270 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IXO1088_024270 PF06827 Zinc finger found in FPG and IleRS IXO1088_024270 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IXO1088_024325 PF13426 PAS domain IXO1088_024325 PF01590 GAF domain IXO1088_024325 PF00360 Phytochrome region IXO1088_024325 PF08446 PAS fold IXO1088_024330 PF01126 Heme oxygenase IXO1088_024335 PF07690 Major Facilitator Superfamily IXO1088_024340 PF01263 Aldose 1-epimerase IXO1088_024355 PF02810 SEC-C motif IXO1088_024365 PF00150 Cellulase (glycosyl hydrolase family 5) IXO1088_024375 PF00150 Cellulase (glycosyl hydrolase family 5) IXO1088_024385 PF00150 Cellulase (glycosyl hydrolase family 5) IXO1088_024395 PF08240 Alcohol dehydrogenase GroES-like domain IXO1088_024395 PF00107 Zinc-binding dehydrogenase IXO1088_024445 PF01037 Lrp/AsnC ligand binding domain IXO1088_024450 PF00351 Biopterin-dependent aromatic amino acid hydroxylase IXO1088_024465 PF00657 GDSL-like Lipase/Acylhydrolase IXO1088_024490 PF00248 Aldo/keto reductase family IXO1088_024495 PF00107 Zinc-binding dehydrogenase IXO1088_024495 PF16884 N-terminal domain of oxidoreductase IXO1088_024500 PF00248 Aldo/keto reductase family IXO1088_024510 PF00849 RNA pseudouridylate synthase IXO1088_024525 PF00270 DEAD/DEAH box helicase IXO1088_024525 PF00271 Helicase conserved C-terminal domain IXO1088_024525 PF04408 Helicase associated domain (HA2) IXO1088_024525 PF08482 ATP-dependent helicase C-terminal IXO1088_024530 PF07308 Protein of unknown function (DUF1456) IXO1088_024535 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IXO1088_024535 PF13378 Enolase C-terminal domain-like IXO1088_024545 PF01557 Fumarylacetoacetate (FAA) hydrolase family IXO1088_024560 PF00248 Aldo/keto reductase family IXO1088_024570 PF04616 Glycosyl hydrolases family 43 IXO1088_024570 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain IXO1088_024590 PF00072 Response regulator receiver domain IXO1088_024590 PF00196 Bacterial regulatory proteins, luxR family IXO1088_024595 PF16177 Acetyl-coenzyme A synthetase N-terminus IXO1088_024595 PF13193 AMP-binding enzyme C-terminal domain IXO1088_024595 PF00501 AMP-binding enzyme IXO1088_024610 PF04341 Protein of unknown function, DUF485 IXO1088_024615 PF00474 Sodium:solute symporter family IXO1088_024630 PF03372 Endonuclease/Exonuclease/phosphatase family IXO1088_024640 PF04226 Transglycosylase associated protein IXO1088_024645 PF01648 4'-phosphopantetheinyl transferase superfamily IXO1088_024650 PF16655 PhoD-like phosphatase, N-terminal domain IXO1088_024650 PF09423 PhoD-like phosphatase IXO1088_024655 PF09423 PhoD-like phosphatase IXO1088_024655 PF16655 PhoD-like phosphatase, N-terminal domain IXO1088_024660 PF02527 rRNA small subunit methyltransferase G IXO1088_024675 PF00830 Ribosomal L28 family IXO1088_024680 PF00471 Ribosomal protein L33 IXO1088_024685 PF04909 Amidohydrolase IXO1088_024705 PF03737 Aldolase/RraA IXO1088_024710 PF03466 LysR substrate binding domain IXO1088_024710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO1088_024715 PF13091 PLD-like domain IXO1088_024715 PF13396 Phospholipase_D-nuclease N-terminal IXO1088_024735 PF00580 UvrD/REP helicase N-terminal domain IXO1088_024735 PF13361 UvrD-like helicase C-terminal domain IXO1088_024750 PF13520 Amino acid permease IXO1088_024765 PF02646 RmuC family IXO1088_024775 PF00255 Glutathione peroxidase IXO1088_024795 PF04055 Radical SAM superfamily IXO1088_024805 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) IXO1088_024820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IXO1088_024820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IXO1088_024830 PF03572 Peptidase family S41 IXO1088_024830 PF13180 PDZ domain IXO1088_024835 PF01551 Peptidase family M23 IXO1088_024845 PF04389 Peptidase family M28 IXO1088_024895 PF02463 RecF/RecN/SMC N terminal domain IXO1088_024900 PF01227 GTP cyclohydrolase I IXO1088_024920 PF02321 Outer membrane efflux protein IXO1088_024930 PF00083 Sugar (and other) transporter IXO1088_025015 PF13614 AAA domain IXO1088_025050 PF02595 Glycerate kinase family IXO1088_025055 PF07690 Major Facilitator Superfamily IXO1088_025070 PF10672 S-adenosylmethionine-dependent methyltransferase IXO1088_025070 PF17785 PUA-like domain IXO1088_025080 PF03741 Integral membrane protein TerC family IXO1088_025085 PF01694 Rhomboid family IXO1088_025090 PF03009 Glycerophosphoryl diester phosphodiesterase family IXO1088_025100 PF01569 PAP2 superfamily IXO1088_025105 PF12631 MnmE helical domain IXO1088_025105 PF01926 50S ribosome-binding GTPase IXO1088_025105 PF10396 GTP-binding protein TrmE N-terminus IXO1088_025110 PF01522 Polysaccharide deacetylase IXO1088_025115 PF14849 YidC periplasmic domain IXO1088_025115 PF02096 60Kd inner membrane protein IXO1088_025120 PF00825 Ribonuclease P IXO1088_025125 PF00468 Ribosomal protein L34