##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM192923v2 #!genome-build-accession NCBI_Assembly:GCA_001929235.2 #!annotation-date 05/28/2019 16:26:11 #!annotation-source NCBI ##sequence-region CP040687.1 1 5093052 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=64187 CP040687.1 Genbank region 1 5093052 . + . ID=CP040687.1:1..5093052;Dbxref=taxon:64187;Is_circular=true;Name=ANONYMOUS;collection-date=2009;country=India;gbkey=Src;genome=chromosome;mol_type=genomic DNA;nat-host=Oryza sativa;pathovar=oryzae;strain=IXO1088 CP040687.1 Genbank gene 1 1329 . + . ID=gene-IXO1088_000010;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=IXO1088_000010 CP040687.1 Protein Homology CDS 1 1329 . + 0 ID=cds-QIE14216.1;Parent=gene-IXO1088_000010;Dbxref=NCBI_GP:QIE14216.1;Name=QIE14216.1;gbkey=CDS;gene=dnaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635396.1;locus_tag=IXO1088_000010;product=chromosomal replication initiator protein DnaA;protein_id=QIE14216.1;transl_table=11 CP040687.1 Genbank gene 1607 2707 . + . ID=gene-IXO1088_000015;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=IXO1088_000015 CP040687.1 Protein Homology CDS 1607 2707 . + 0 ID=cds-QIE14217.1;Parent=gene-IXO1088_000015;Dbxref=NCBI_GP:QIE14217.1;Name=QIE14217.1;gbkey=CDS;gene=dnaN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451791.1;locus_tag=IXO1088_000015;product=DNA polymerase III subunit beta;protein_id=QIE14217.1;transl_table=11 CP040687.1 Genbank pseudogene 3206 3361 . + . ID=gene-IXO1088_000020;Name=IXO1088_000020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000020;pseudo=true CP040687.1 Protein Homology CDS 3206 3361 . + 0 ID=cds-IXO1088_000020;Parent=gene-IXO1088_000020;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258951.1;locus_tag=IXO1088_000020;product=DNA helicase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3959 5065 . + . ID=gene-IXO1088_000025;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=IXO1088_000025 CP040687.1 Protein Homology CDS 3959 5065 . + 0 ID=cds-QIE14218.1;Parent=gene-IXO1088_000025;Dbxref=NCBI_GP:QIE14218.1;Name=QIE14218.1;gbkey=CDS;gene=recF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376403.1;locus_tag=IXO1088_000025;product=DNA replication/repair protein RecF;protein_id=QIE14218.1;transl_table=11 CP040687.1 Genbank gene 5181 7625 . + . ID=gene-IXO1088_000030;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=IXO1088_000030 CP040687.1 Protein Homology CDS 5181 7625 . + 0 ID=cds-QIE14219.1;Parent=gene-IXO1088_000030;Dbxref=NCBI_GP:QIE14219.1;Name=QIE14219.1;gbkey=CDS;gene=gyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635399.1;locus_tag=IXO1088_000030;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=QIE14219.1;transl_table=11 CP040687.1 Genbank gene 7693 8529 . + . ID=gene-IXO1088_000035;Name=IXO1088_000035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000035 CP040687.1 Protein Homology CDS 7693 8529 . + 0 ID=cds-QIE14220.1;Parent=gene-IXO1088_000035;Dbxref=NCBI_GP:QIE14220.1;Name=QIE14220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364801.1;locus_tag=IXO1088_000035;product=CPBP family intramembrane metalloprotease;protein_id=QIE14220.1;transl_table=11 CP040687.1 Genbank gene 8716 9522 . + . ID=gene-IXO1088_000040;Name=IXO1088_000040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000040 CP040687.1 Protein Homology CDS 8716 9522 . + 0 ID=cds-QIE14221.1;Parent=gene-IXO1088_000040;Dbxref=NCBI_GP:QIE14221.1;Name=QIE14221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635401.1;locus_tag=IXO1088_000040;product=M48 family metallopeptidase;protein_id=QIE14221.1;transl_table=11 CP040687.1 Genbank gene 9799 10992 . + . ID=gene-IXO1088_000045;Name=IXO1088_000045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000045 CP040687.1 Protein Homology CDS 9799 10992 . + 0 ID=cds-QIE14222.1;Parent=gene-IXO1088_000045;Dbxref=NCBI_GP:QIE14222.1;Name=QIE14222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635402.1;locus_tag=IXO1088_000045;product=tetratricopeptide repeat protein;protein_id=QIE14222.1;transl_table=11 CP040687.1 Genbank gene 11146 11820 . + . ID=gene-IXO1088_000050;Name=IXO1088_000050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000050 CP040687.1 Protein Homology CDS 11146 11820 . + 0 ID=cds-QIE14223.1;Parent=gene-IXO1088_000050;Dbxref=NCBI_GP:QIE14223.1;Name=QIE14223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635403.1;locus_tag=IXO1088_000050;product=energy transducer TonB;protein_id=QIE14223.1;transl_table=11 CP040687.1 Genbank gene 11905 12666 . + . ID=gene-IXO1088_000055;Name=IXO1088_000055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000055 CP040687.1 Protein Homology CDS 11905 12666 . + 0 ID=cds-QIE14224.1;Parent=gene-IXO1088_000055;Dbxref=NCBI_GP:QIE14224.1;Name=QIE14224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635404.1;locus_tag=IXO1088_000055;product=MotA/TolQ/ExbB proton channel family protein;protein_id=QIE14224.1;transl_table=11 CP040687.1 Genbank gene 12713 13135 . + . ID=gene-IXO1088_000060;Name=IXO1088_000060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000060 CP040687.1 Protein Homology CDS 12713 13135 . + 0 ID=cds-QIE14225.1;Parent=gene-IXO1088_000060;Dbxref=NCBI_GP:QIE14225.1;Name=QIE14225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635405.1;locus_tag=IXO1088_000060;product=biopolymer transporter ExbD;protein_id=QIE14225.1;transl_table=11 CP040687.1 Genbank gene 13139 13552 . + . ID=gene-IXO1088_000065;Name=IXO1088_000065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000065 CP040687.1 Protein Homology CDS 13139 13552 . + 0 ID=cds-QIE14226.1;Parent=gene-IXO1088_000065;Dbxref=NCBI_GP:QIE14226.1;Name=QIE14226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017356925.1;locus_tag=IXO1088_000065;product=biopolymer transporter ExbD;protein_id=QIE14226.1;transl_table=11 CP040687.1 Genbank gene 13848 14615 . - . ID=gene-IXO1088_000070;Name=IXO1088_000070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000070 CP040687.1 Protein Homology CDS 13848 14615 . - 0 ID=cds-QIE14227.1;Parent=gene-IXO1088_000070;Dbxref=NCBI_GP:QIE14227.1;Name=QIE14227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364763.1;locus_tag=IXO1088_000070;product=pyridoxine 5'-phosphate synthase;protein_id=QIE14227.1;transl_table=11 CP040687.1 Genbank gene 14626 14895 . - . ID=gene-IXO1088_000075;Name=IXO1088_000075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000075 CP040687.1 Protein Homology CDS 14626 14895 . - 0 ID=cds-QIE17804.1;Parent=gene-IXO1088_000075;Dbxref=NCBI_GP:QIE17804.1;Name=QIE17804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635408.1;locus_tag=IXO1088_000075;product=hypothetical protein;protein_id=QIE17804.1;transl_table=11 CP040687.1 Genbank gene 14970 16430 . - . ID=gene-IXO1088_000080;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=IXO1088_000080 CP040687.1 Protein Homology CDS 14970 16430 . - 0 ID=cds-QIE14228.1;Parent=gene-IXO1088_000080;Dbxref=NCBI_GP:QIE14228.1;Name=QIE14228.1;gbkey=CDS;gene=cls;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635409.1;locus_tag=IXO1088_000080;product=cardiolipin synthase;protein_id=QIE14228.1;transl_table=11 CP040687.1 Genbank pseudogene 16812 17037 . + . ID=gene-IXO1088_000085;Name=IXO1088_000085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000085;pseudo=true CP040687.1 Protein Homology CDS 16812 17037 . + 0 ID=cds-IXO1088_000085;Parent=gene-IXO1088_000085;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167724.1;locus_tag=IXO1088_000085;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 17077 18087 . - . ID=gene-IXO1088_000090;Name=IXO1088_000090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000090 CP040687.1 Protein Homology CDS 17077 18087 . - 0 ID=cds-QIE14229.1;Parent=gene-IXO1088_000090;Dbxref=NCBI_GP:QIE14229.1;Name=QIE14229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635491.1;locus_tag=IXO1088_000090;product=class 1 fructose-bisphosphatase;protein_id=QIE14229.1;transl_table=11 CP040687.1 Genbank gene 18359 19561 . - . ID=gene-IXO1088_000095;Name=IXO1088_000095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000095 CP040687.1 Protein Homology CDS 18359 19561 . - 0 ID=cds-QIE14230.1;Parent=gene-IXO1088_000095;Dbxref=NCBI_GP:QIE14230.1;Name=QIE14230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302312.1;locus_tag=IXO1088_000095;product=aspartate/tyrosine/aromatic aminotransferase;protein_id=QIE14230.1;transl_table=11 CP040687.1 Genbank gene 19703 21841 . + . ID=gene-IXO1088_000100;Name=IXO1088_000100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000100 CP040687.1 Protein Homology CDS 19703 21841 . + 0 ID=cds-QIE14231.1;Parent=gene-IXO1088_000100;Dbxref=NCBI_GP:QIE14231.1;Name=QIE14231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112434.1;locus_tag=IXO1088_000100;product=TonB-dependent receptor;protein_id=QIE14231.1;transl_table=11 CP040687.1 Genbank gene 22052 22345 . + . ID=gene-IXO1088_000105;Name=IXO1088_000105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000105 CP040687.1 Protein Homology CDS 22052 22345 . + 0 ID=cds-QIE14232.1;Parent=gene-IXO1088_000105;Dbxref=NCBI_GP:QIE14232.1;Name=QIE14232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379761.1;locus_tag=IXO1088_000105;product=hypothetical protein;protein_id=QIE14232.1;transl_table=11 CP040687.1 Genbank gene 22528 23151 . + . ID=gene-IXO1088_000110;Name=IXO1088_000110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000110 CP040687.1 Protein Homology CDS 22528 23151 . + 0 ID=cds-QIE14233.1;Parent=gene-IXO1088_000110;Dbxref=NCBI_GP:QIE14233.1;Name=QIE14233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501386.1;locus_tag=IXO1088_000110;product=hypothetical protein;protein_id=QIE14233.1;transl_table=11 CP040687.1 Genbank gene 23119 24106 . - . ID=gene-IXO1088_000115;Name=IXO1088_000115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000115 CP040687.1 Protein Homology CDS 23621 24106 . - 0 ID=cds-QIE14234.1;Parent=gene-IXO1088_000115;Dbxref=NCBI_GP:QIE14234.1;Name=QIE14234.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257128.1;locus_tag=IXO1088_000115;product=IS5 family transposase;protein_id=QIE14234.1;transl_table=11 CP040687.1 Protein Homology CDS 23119 23619 . - 0 ID=cds-QIE14234.1;Parent=gene-IXO1088_000115;Dbxref=NCBI_GP:QIE14234.1;Name=QIE14234.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257128.1;locus_tag=IXO1088_000115;product=IS5 family transposase;protein_id=QIE14234.1;transl_table=11 CP040687.1 Genbank gene 24154 25320 . - . ID=gene-IXO1088_000120;Name=IXO1088_000120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000120 CP040687.1 Protein Homology CDS 24154 25320 . - 0 ID=cds-QIE14235.1;Parent=gene-IXO1088_000120;Dbxref=NCBI_GP:QIE14235.1;Name=QIE14235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573929.1;locus_tag=IXO1088_000120;product=alpha-hydroxy-acid oxidizing protein;protein_id=QIE14235.1;transl_table=11 CP040687.1 Genbank pseudogene 25467 26031 . - . ID=gene-IXO1088_000125;Name=IXO1088_000125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000125;pseudo=true CP040687.1 Protein Homology CDS 25467 26031 . - 0 ID=cds-IXO1088_000125;Parent=gene-IXO1088_000125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165246.1;locus_tag=IXO1088_000125;product=isoprenylcysteine carboxylmethyltransferase family protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 26092 26358 . + . ID=gene-IXO1088_000130;Name=IXO1088_000130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000130;pseudo=true CP040687.1 Protein Homology CDS 26092 26358 . + 0 ID=cds-IXO1088_000130;Parent=gene-IXO1088_000130;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014088940.1;locus_tag=IXO1088_000130;product=sensor histidine kinase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 26361 27227 . - . ID=gene-IXO1088_000135;Name=IXO1088_000135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000135;pseudo=true CP040687.1 Protein Homology CDS 26361 27227 . - 0 ID=cds-IXO1088_000135;Parent=gene-IXO1088_000135;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635509.1;locus_tag=IXO1088_000135;product=transcriptional regulator;pseudo=true;transl_table=11 CP040687.1 Genbank gene 27509 28726 . + . ID=gene-IXO1088_000140;Name=IXO1088_000140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000140 CP040687.1 Protein Homology CDS 27509 28726 . + 0 ID=cds-QIE14236.1;Parent=gene-IXO1088_000140;Dbxref=NCBI_GP:QIE14236.1;Name=QIE14236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443565.1;locus_tag=IXO1088_000140;product=trans-2-enoyl-CoA reductase family protein;protein_id=QIE14236.1;transl_table=11 CP040687.1 Genbank pseudogene 28902 29140 . + . ID=gene-IXO1088_000145;Name=IXO1088_000145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000145;pseudo=true CP040687.1 Protein Homology CDS 28902 29140 . + 0 ID=cds-IXO1088_000145;Parent=gene-IXO1088_000145;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301942.1;locus_tag=IXO1088_000145;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 29347 30369 . - . ID=gene-IXO1088_000150;Name=IXO1088_000150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000150 CP040687.1 Protein Homology CDS 29347 30369 . - 0 ID=cds-QIE14237.1;Parent=gene-IXO1088_000150;Dbxref=NCBI_GP:QIE14237.1;Name=QIE14237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635513.1;locus_tag=IXO1088_000150;product=sugar kinase;protein_id=QIE14237.1;transl_table=11 CP040687.1 Genbank pseudogene 30656 31009 . + . ID=gene-IXO1088_000155;Name=IXO1088_000155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000155;pseudo=true CP040687.1 Protein Homology CDS 30656 31009 . + 0 ID=cds-IXO1088_000155;Parent=gene-IXO1088_000155;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635514.1;locus_tag=IXO1088_000155;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 30950 32203 . - . ID=gene-IXO1088_000160;Name=IXO1088_000160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000160 CP040687.1 Protein Homology CDS 30950 32203 . - 0 ID=cds-QIE14238.1;Parent=gene-IXO1088_000160;Dbxref=NCBI_GP:QIE14238.1;Name=QIE14238.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13166.4;locus_tag=IXO1088_000160;product=hypothetical protein;protein_id=QIE14238.1;transl_table=11 CP040687.1 Genbank gene 32277 33075 . + . ID=gene-IXO1088_000165;Name=IXO1088_000165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000165 CP040687.1 Protein Homology CDS 32277 32548 . + 0 ID=cds-QIE14239.1;Parent=gene-IXO1088_000165;Dbxref=NCBI_GP:QIE14239.1;Name=QIE14239.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_000165;product=IS5 family transposase;protein_id=QIE14239.1;transl_table=11 CP040687.1 Protein Homology CDS 32547 33075 . + 1 ID=cds-QIE14239.1;Parent=gene-IXO1088_000165;Dbxref=NCBI_GP:QIE14239.1;Name=QIE14239.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_000165;product=IS5 family transposase;protein_id=QIE14239.1;transl_table=11 CP040687.1 Genbank gene 33062 34039 . - . ID=gene-IXO1088_000170;Name=IXO1088_000170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000170 CP040687.1 Protein Homology CDS 33062 34039 . - 0 ID=cds-QIE14240.1;Parent=gene-IXO1088_000170;Dbxref=NCBI_GP:QIE14240.1;Name=QIE14240.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13166.4;locus_tag=IXO1088_000170;product=hypothetical protein;protein_id=QIE14240.1;transl_table=11 CP040687.1 Genbank gene 34124 34318 . - . ID=gene-IXO1088_000175;Name=IXO1088_000175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000175 CP040687.1 Protein Homology CDS 34124 34318 . - 0 ID=cds-QIE14241.1;Parent=gene-IXO1088_000175;Dbxref=NCBI_GP:QIE14241.1;Name=QIE14241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154957.1;locus_tag=IXO1088_000175;product=hypothetical protein;protein_id=QIE14241.1;transl_table=11 CP040687.1 Genbank pseudogene 34511 34684 . - . ID=gene-IXO1088_000180;Name=IXO1088_000180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000180;pseudo=true CP040687.1 Protein Homology CDS 34511 34684 . - 0 ID=cds-IXO1088_000180;Parent=gene-IXO1088_000180;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=IXO1088_000180;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 34921 35583 . - . ID=gene-IXO1088_000185;Name=IXO1088_000185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000185 CP040687.1 Protein Homology CDS 34921 35583 . - 0 ID=cds-QIE14242.1;Parent=gene-IXO1088_000185;Dbxref=NCBI_GP:QIE14242.1;Name=QIE14242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159050.1;locus_tag=IXO1088_000185;product=DUF938 domain-containing protein;protein_id=QIE14242.1;transl_table=11 CP040687.1 Genbank gene 35737 36531 . - . ID=gene-IXO1088_000190;Name=IXO1088_000190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000190 CP040687.1 Protein Homology CDS 35737 36531 . - 0 ID=cds-QIE17805.1;Parent=gene-IXO1088_000190;Dbxref=NCBI_GP:QIE17805.1;Name=QIE17805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116524.1;locus_tag=IXO1088_000190;product=EcsC family protein;protein_id=QIE17805.1;transl_table=11 CP040687.1 Genbank gene 36699 37172 . + . ID=gene-IXO1088_000195;Name=IXO1088_000195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000195 CP040687.1 Protein Homology CDS 36699 37172 . + 0 ID=cds-QIE14243.1;Parent=gene-IXO1088_000195;Dbxref=NCBI_GP:QIE14243.1;Name=QIE14243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118118.1;locus_tag=IXO1088_000195;product=SRPBCC domain-containing protein;protein_id=QIE14243.1;transl_table=11 CP040687.1 Genbank pseudogene 37531 38769 . - . ID=gene-IXO1088_000200;Name=IXO1088_000200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000200;pseudo=true CP040687.1 Protein Homology CDS 37531 38769 . - 0 ID=cds-IXO1088_000200;Parent=gene-IXO1088_000200;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635478.1;locus_tag=IXO1088_000200;product=MFS transporter;pseudo=true;transl_table=11 CP040687.1 Genbank gene 39253 39334 . + . ID=gene-IXO1088_000205;Name=IXO1088_000205;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_000205 CP040687.1 cmsearch ncRNA 39253 39334 . + . ID=rna-IXO1088_000205;Parent=gene-IXO1088_000205;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_000205;product=sX9 sRNA CP040687.1 cmsearch exon 39253 39334 . + . ID=exon-IXO1088_000205-1;Parent=rna-IXO1088_000205;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_000205;product=sX9 sRNA CP040687.1 Genbank gene 39398 40360 . - . ID=gene-IXO1088_000210;Name=IXO1088_000210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000210 CP040687.1 Protein Homology CDS 39398 40360 . - 0 ID=cds-QIE14244.1;Parent=gene-IXO1088_000210;Dbxref=NCBI_GP:QIE14244.1;Name=QIE14244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1088_000210;product=IS1595-like element ISXo2 family transposase;protein_id=QIE14244.1;transl_table=11 CP040687.1 Genbank pseudogene 40498 40826 . - . ID=gene-IXO1088_000215;Name=IXO1088_000215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000215;pseudo=true CP040687.1 Protein Homology CDS 40498 40826 . - 0 ID=cds-IXO1088_000215;Parent=gene-IXO1088_000215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635477.1;locus_tag=IXO1088_000215;product=thioredoxin family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 40847 41245 . - . ID=gene-IXO1088_000220;Name=IXO1088_000220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000220 CP040687.1 Protein Homology CDS 40847 41245 . - 0 ID=cds-QIE14245.1;Parent=gene-IXO1088_000220;Dbxref=NCBI_GP:QIE14245.1;Name=QIE14245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635476.1;locus_tag=IXO1088_000220;product=host attachment protein;protein_id=QIE14245.1;transl_table=11 CP040687.1 Genbank gene 41337 42029 . - . ID=gene-IXO1088_000225;Name=IXO1088_000225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000225 CP040687.1 Protein Homology CDS 41337 42029 . - 0 ID=cds-QIE14246.1;Parent=gene-IXO1088_000225;Dbxref=NCBI_GP:QIE14246.1;Name=QIE14246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443579.1;locus_tag=IXO1088_000225;product=hypothetical protein;protein_id=QIE14246.1;transl_table=11 CP040687.1 Genbank gene 42199 42669 . - . ID=gene-IXO1088_000230;Name=IXO1088_000230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000230 CP040687.1 Protein Homology CDS 42199 42669 . - 0 ID=cds-QIE14247.1;Parent=gene-IXO1088_000230;Dbxref=NCBI_GP:QIE14247.1;Name=QIE14247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302281.1;locus_tag=IXO1088_000230;product=NUDIX domain-containing protein;protein_id=QIE14247.1;transl_table=11 CP040687.1 Genbank pseudogene 43072 44139 . + . ID=gene-IXO1088_000235;Name=IXO1088_000235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000235;pseudo=true CP040687.1 Protein Homology CDS 43072 44139 . + 0 ID=cds-IXO1088_000235;Parent=gene-IXO1088_000235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163989.1;locus_tag=IXO1088_000235;product=M4 family metallopeptidase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 44136 44447 . + . ID=gene-IXO1088_000240;Name=IXO1088_000240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000240 CP040687.1 Protein Homology CDS 44136 44447 . + 0 ID=cds-QIE14248.1;Parent=gene-IXO1088_000240;Dbxref=NCBI_GP:QIE14248.1;Name=QIE14248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635470.1;locus_tag=IXO1088_000240;product=hypothetical protein;protein_id=QIE14248.1;transl_table=11 CP040687.1 Genbank gene 44702 45649 . - . ID=gene-IXO1088_000245;Name=IXO1088_000245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000245 CP040687.1 Protein Homology CDS 44702 45649 . - 0 ID=cds-QIE14249.1;Parent=gene-IXO1088_000245;Dbxref=NCBI_GP:QIE14249.1;Name=QIE14249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407232.1;locus_tag=IXO1088_000245;product=IS30 family transposase;protein_id=QIE14249.1;transl_table=11 CP040687.1 Genbank gene 45790 46836 . - . ID=gene-IXO1088_000250;Name=IXO1088_000250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000250 CP040687.1 Protein Homology CDS 45790 46836 . - 0 ID=cds-QIE14250.1;Parent=gene-IXO1088_000250;Dbxref=NCBI_GP:QIE14250.1;Name=QIE14250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443584.1;locus_tag=IXO1088_000250;product=IS630 family transposase;protein_id=QIE14250.1;transl_table=11 CP040687.1 Genbank gene 46975 47256 . + . ID=gene-IXO1088_000255;Name=IXO1088_000255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000255 CP040687.1 Protein Homology CDS 46975 47256 . + 0 ID=cds-QIE14251.1;Parent=gene-IXO1088_000255;Dbxref=NCBI_GP:QIE14251.1;Name=QIE14251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257048.1;locus_tag=IXO1088_000255;product=hypothetical protein;protein_id=QIE14251.1;transl_table=11 CP040687.1 Genbank gene 47297 47569 . + . ID=gene-IXO1088_000260;Name=IXO1088_000260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000260 CP040687.1 Protein Homology CDS 47297 47569 . + 0 ID=cds-QIE14252.1;Parent=gene-IXO1088_000260;Dbxref=NCBI_GP:QIE14252.1;Name=QIE14252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639228.1;locus_tag=IXO1088_000260;product=hypothetical protein;protein_id=QIE14252.1;transl_table=11 CP040687.1 Genbank gene 47637 47846 . + . ID=gene-IXO1088_000265;Name=IXO1088_000265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000265 CP040687.1 Protein Homology CDS 47637 47846 . + 0 ID=cds-QIE14253.1;Parent=gene-IXO1088_000265;Dbxref=NCBI_GP:QIE14253.1;Name=QIE14253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639229.2;locus_tag=IXO1088_000265;product=hypothetical protein;protein_id=QIE14253.1;transl_table=11 CP040687.1 Genbank gene 47967 48917 . - . ID=gene-IXO1088_000270;Name=IXO1088_000270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000270 CP040687.1 Protein Homology CDS 47967 48917 . - 0 ID=cds-QIE14254.1;Parent=gene-IXO1088_000270;Dbxref=NCBI_GP:QIE14254.1;Name=QIE14254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_048909999.1;locus_tag=IXO1088_000270;product=IS5 family transposase;protein_id=QIE14254.1;transl_table=11 CP040687.1 Genbank pseudogene 48983 49423 . + . ID=gene-IXO1088_000275;Name=IXO1088_000275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000275;pseudo=true CP040687.1 Protein Homology CDS 48983 49423 . + 0 ID=cds-IXO1088_000275;Parent=gene-IXO1088_000275;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639229.2;locus_tag=IXO1088_000275;product=DUF4142 domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 49629 50516 . + . ID=gene-IXO1088_000280;Name=IXO1088_000280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000280 CP040687.1 Protein Homology CDS 49629 50516 . + 0 ID=cds-QIE14255.1;Parent=gene-IXO1088_000280;Dbxref=NCBI_GP:QIE14255.1;Name=QIE14255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112300.1;locus_tag=IXO1088_000280;product=TIGR01777 family protein;protein_id=QIE14255.1;transl_table=11 CP040687.1 Genbank pseudogene 50664 50756 . + . ID=gene-IXO1088_000285;Name=IXO1088_000285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000285;pseudo=true CP040687.1 Protein Homology CDS 50664 50756 . + 0 ID=cds-IXO1088_000285;Parent=gene-IXO1088_000285;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639233.1;locus_tag=IXO1088_000285;product=DNA-binding response regulator;pseudo=true;transl_table=11 CP040687.1 Genbank gene 50822 51139 . + . ID=gene-IXO1088_000290;Name=IXO1088_000290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000290 CP040687.1 Protein Homology CDS 50822 51139 . + 0 ID=cds-QIE14256.1;Parent=gene-IXO1088_000290;Dbxref=NCBI_GP:QIE14256.1;Name=QIE14256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257053.1;locus_tag=IXO1088_000290;product=ATP-binding protein;protein_id=QIE14256.1;transl_table=11 CP040687.1 Genbank gene 51599 52450 . - . ID=gene-IXO1088_000295;Name=IXO1088_000295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000295 CP040687.1 Protein Homology CDS 51599 52450 . - 0 ID=cds-QIE14257.1;Parent=gene-IXO1088_000295;Dbxref=NCBI_GP:QIE14257.1;Name=QIE14257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052649.1;locus_tag=IXO1088_000295;product=histidine biosynthesis protein HisIE;protein_id=QIE14257.1;transl_table=11 CP040687.1 Genbank gene 52692 54128 . + . ID=gene-IXO1088_000300;Name=IXO1088_000300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000300 CP040687.1 Protein Homology CDS 52692 54128 . + 0 ID=cds-QIE14258.1;Parent=gene-IXO1088_000300;Dbxref=NCBI_GP:QIE14258.1;Name=QIE14258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639238.1;locus_tag=IXO1088_000300;product=Do family serine endopeptidase;protein_id=QIE14258.1;transl_table=11 CP040687.1 Genbank gene 54245 54607 . + . ID=gene-IXO1088_000305;Name=IXO1088_000305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000305 CP040687.1 Protein Homology CDS 54245 54607 . + 0 ID=cds-QIE14259.1;Parent=gene-IXO1088_000305;Dbxref=NCBI_GP:QIE14259.1;Name=QIE14259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639239.1;locus_tag=IXO1088_000305;product=hypothetical protein;protein_id=QIE14259.1;transl_table=11 CP040687.1 Genbank gene 54611 55096 . + . ID=gene-IXO1088_000310;Name=IXO1088_000310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000310 CP040687.1 Protein Homology CDS 54611 55096 . + 0 ID=cds-QIE14260.1;Parent=gene-IXO1088_000310;Dbxref=NCBI_GP:QIE14260.1;Name=QIE14260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115391.1;locus_tag=IXO1088_000310;product=phage holin family protein;protein_id=QIE14260.1;transl_table=11 CP040687.1 Genbank gene 55093 55476 . + . ID=gene-IXO1088_000315;Name=IXO1088_000315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000315 CP040687.1 Protein Homology CDS 55093 55476 . + 0 ID=cds-QIE14261.1;Parent=gene-IXO1088_000315;Dbxref=NCBI_GP:QIE14261.1;Name=QIE14261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117789.1;locus_tag=IXO1088_000315;product=hypothetical protein;protein_id=QIE14261.1;transl_table=11 CP040687.1 Genbank gene 55646 55722 . + . ID=gene-IXO1088_000320;Name=IXO1088_000320;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_000320 CP040687.1 cmsearch ncRNA 55646 55722 . + . ID=rna-IXO1088_000320;Parent=gene-IXO1088_000320;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_000320;product=sX9 sRNA CP040687.1 cmsearch exon 55646 55722 . + . ID=exon-IXO1088_000320-1;Parent=rna-IXO1088_000320;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_000320;product=sX9 sRNA CP040687.1 Genbank gene 56034 57662 . - . ID=gene-IXO1088_000325;Name=IXO1088_000325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000325 CP040687.1 Protein Homology CDS 56034 57662 . - 0 ID=cds-QIE17806.1;Parent=gene-IXO1088_000325;Dbxref=NCBI_GP:QIE17806.1;Name=QIE17806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377352.1;locus_tag=IXO1088_000325;product=leucine-rich repeat domain-containing protein;protein_id=QIE17806.1;transl_table=11 CP040687.1 Genbank gene 58538 60946 . - . ID=gene-IXO1088_000330;Name=IXO1088_000330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000330 CP040687.1 Protein Homology CDS 58538 60946 . - 0 ID=cds-QIE14262.1;Parent=gene-IXO1088_000330;Dbxref=NCBI_GP:QIE14262.1;Name=QIE14262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505162.1;locus_tag=IXO1088_000330;product=serine kinase;protein_id=QIE14262.1;transl_table=11 CP040687.1 Genbank pseudogene 61531 62849 . + . ID=gene-IXO1088_000335;Name=IXO1088_000335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000335;pseudo=true CP040687.1 Protein Homology CDS 61531 62849 . + 0 ID=cds-IXO1088_000335;Parent=gene-IXO1088_000335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_000335;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 63078 63524 . + . ID=gene-IXO1088_000340;Name=IXO1088_000340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000340 CP040687.1 Protein Homology CDS 63078 63524 . + 0 ID=cds-QIE14263.1;Parent=gene-IXO1088_000340;Dbxref=NCBI_GP:QIE14263.1;Name=QIE14263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367891.1;locus_tag=IXO1088_000340;product=hypothetical protein;protein_id=QIE14263.1;transl_table=11 CP040687.1 Genbank gene 63521 65506 . + . ID=gene-IXO1088_000345;Name=IXO1088_000345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000345 CP040687.1 Protein Homology CDS 63521 65506 . + 0 ID=cds-QIE14264.1;Parent=gene-IXO1088_000345;Dbxref=NCBI_GP:QIE14264.1;Name=QIE14264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257071.1;locus_tag=IXO1088_000345;product=hypothetical protein;protein_id=QIE14264.1;transl_table=11 CP040687.1 Genbank gene 65612 65688 . - . ID=gene-IXO1088_000350;Name=IXO1088_000350;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_000350 CP040687.1 cmsearch ncRNA 65612 65688 . - . ID=rna-IXO1088_000350;Parent=gene-IXO1088_000350;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_000350;product=sX9 sRNA CP040687.1 cmsearch exon 65612 65688 . - . ID=exon-IXO1088_000350-1;Parent=rna-IXO1088_000350;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_000350;product=sX9 sRNA CP040687.1 Genbank gene 65922 66392 . - . ID=gene-IXO1088_000355;Name=IXO1088_000355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000355 CP040687.1 Protein Homology CDS 65922 66392 . - 0 ID=cds-QIE14265.1;Parent=gene-IXO1088_000355;Dbxref=NCBI_GP:QIE14265.1;Name=QIE14265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636594.1;locus_tag=IXO1088_000355;product=4-hydroxyphenylacetate 3-monooxygenase;protein_id=QIE14265.1;transl_table=11 CP040687.1 Genbank gene 66447 66728 . - . ID=gene-IXO1088_000360;Name=IXO1088_000360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000360 CP040687.1 Protein Homology CDS 66447 66728 . - 0 ID=cds-QIE14266.1;Parent=gene-IXO1088_000360;Dbxref=NCBI_GP:QIE14266.1;Name=QIE14266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156501.1;locus_tag=IXO1088_000360;product=serine kinase;protein_id=QIE14266.1;transl_table=11 CP040687.1 Genbank gene 66809 67051 . - . ID=gene-IXO1088_000365;Name=IXO1088_000365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000365 CP040687.1 Protein Homology CDS 66809 67051 . - 0 ID=cds-QIE14267.1;Parent=gene-IXO1088_000365;Dbxref=NCBI_GP:QIE14267.1;Name=QIE14267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301127.1;locus_tag=IXO1088_000365;product=serine kinase;protein_id=QIE14267.1;transl_table=11 CP040687.1 Genbank gene 67061 67999 . - . ID=gene-IXO1088_000370;Name=IXO1088_000370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000370 CP040687.1 Protein Homology CDS 67061 67999 . - 0 ID=cds-QIE14268.1;Parent=gene-IXO1088_000370;Dbxref=NCBI_GP:QIE14268.1;Name=QIE14268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965398.1;locus_tag=IXO1088_000370;product=serine kinase;protein_id=QIE14268.1;transl_table=11 CP040687.1 Genbank gene 67996 68823 . - . ID=gene-IXO1088_000375;Name=IXO1088_000375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000375 CP040687.1 Protein Homology CDS 67996 68823 . - 0 ID=cds-QIE17807.1;Parent=gene-IXO1088_000375;Dbxref=NCBI_GP:QIE17807.1;Name=QIE17807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257076.1;locus_tag=IXO1088_000375;product=4-hydroxyphenylacetate catabolism regulator HpaA;protein_id=QIE17807.1;transl_table=11 CP040687.1 Genbank gene 68820 69080 . - . ID=gene-IXO1088_000380;Name=IXO1088_000380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000380 CP040687.1 Protein Homology CDS 68820 69080 . - 0 ID=cds-QIE14269.1;Parent=gene-IXO1088_000380;Dbxref=NCBI_GP:QIE14269.1;Name=QIE14269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901415.1;locus_tag=IXO1088_000380;product=EscS/YscS/HrcS family type III secretion system export apparatus protein;protein_id=QIE14269.1;transl_table=11 CP040687.1 Genbank gene 69085 69729 . - . ID=gene-IXO1088_000385;Name=IXO1088_000385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000385 CP040687.1 Protein Homology CDS 69085 69729 . - 0 ID=cds-QIE14270.1;Parent=gene-IXO1088_000385;Dbxref=NCBI_GP:QIE14270.1;Name=QIE14270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636600.1;locus_tag=IXO1088_000385;product=EscR/YscR/HrcR family type III secretion system export apparatus protein;protein_id=QIE14270.1;transl_table=11 CP040687.1 Genbank gene 69716 70669 . - . ID=gene-IXO1088_000390;Name=IXO1088_000390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000390 CP040687.1 Protein Homology CDS 69716 70669 . - 0 ID=cds-QIE14271.1;Parent=gene-IXO1088_000390;Dbxref=NCBI_GP:QIE14271.1;Name=QIE14271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156505.1;locus_tag=IXO1088_000390;product=YscQ/HrcQ family type III secretion apparatus protein;protein_id=QIE14271.1;transl_table=11 CP040687.1 Genbank gene 70762 71403 . - . ID=gene-IXO1088_000395;Name=hpaP;gbkey=Gene;gene=hpaP;gene_biotype=protein_coding;locus_tag=IXO1088_000395 CP040687.1 Protein Homology CDS 70762 71403 . - 0 ID=cds-QIE14272.1;Parent=gene-IXO1088_000395;Dbxref=NCBI_GP:QIE14272.1;Name=QIE14272.1;gbkey=CDS;gene=hpaP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575445.1;locus_tag=IXO1088_000395;product=type III secretion protein HpaP;protein_id=QIE14272.1;transl_table=11 CP040687.1 Genbank gene 71403 73325 . - . ID=gene-IXO1088_000400;Name=IXO1088_000400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000400 CP040687.1 Protein Homology CDS 71403 73325 . - 0 ID=cds-QIE17808.1;Parent=gene-IXO1088_000400;Dbxref=NCBI_GP:QIE17808.1;Name=QIE17808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301121.1;locus_tag=IXO1088_000400;product=EscV/YscV/HrcV family type III secretion system export apparatus protein;protein_id=QIE17808.1;transl_table=11 CP040687.1 Genbank gene 73334 74413 . - . ID=gene-IXO1088_000405;Name=IXO1088_000405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000405 CP040687.1 Protein Homology CDS 73334 74413 . - 0 ID=cds-QIE14273.1;Parent=gene-IXO1088_000405;Dbxref=NCBI_GP:QIE14273.1;Name=QIE14273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636604.1;locus_tag=IXO1088_000405;product=EscU/YscU/HrcU family type III secretion system export apparatus switch protein;protein_id=QIE14273.1;transl_table=11 CP040687.1 Genbank gene 74628 75083 . + . ID=gene-IXO1088_000410;Name=IXO1088_000410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000410 CP040687.1 Protein Homology CDS 74628 75083 . + 0 ID=cds-QIE14274.1;Parent=gene-IXO1088_000410;Dbxref=NCBI_GP:QIE14274.1;Name=QIE14274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636605.1;locus_tag=IXO1088_000410;product=HrpB1 family type III secretion system apparatus protein;protein_id=QIE14274.1;transl_table=11 CP040687.1 Genbank gene 75117 75509 . + . ID=gene-IXO1088_000415;Name=IXO1088_000415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000415 CP040687.1 Protein Homology CDS 75117 75509 . + 0 ID=cds-QIE14275.1;Parent=gene-IXO1088_000415;Dbxref=NCBI_GP:QIE14275.1;Name=QIE14275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505147.1;locus_tag=IXO1088_000415;product=type III secretion protein HrpB2;protein_id=QIE14275.1;transl_table=11 CP040687.1 Genbank gene 75511 76272 . + . ID=gene-IXO1088_000420;Name=IXO1088_000420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000420 CP040687.1 Protein Homology CDS 75511 76272 . + 0 ID=cds-QIE14276.1;Parent=gene-IXO1088_000420;Dbxref=NCBI_GP:QIE14276.1;Name=QIE14276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636607.1;locus_tag=IXO1088_000420;product=EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein;protein_id=QIE14276.1;transl_table=11 CP040687.1 Genbank gene 76280 76909 . + . ID=gene-IXO1088_000425;Name=IXO1088_000425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000425 CP040687.1 Protein Homology CDS 76280 76909 . + 0 ID=cds-QIE14277.1;Parent=gene-IXO1088_000425;Dbxref=NCBI_GP:QIE14277.1;Name=QIE14277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171652.1;locus_tag=IXO1088_000425;product=type III secretion protein HrpB4;protein_id=QIE14277.1;transl_table=11 CP040687.1 Genbank gene 76894 77595 . + . ID=gene-IXO1088_000430;Name=IXO1088_000430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000430 CP040687.1 Protein Homology CDS 76894 77595 . + 0 ID=cds-QIE14278.1;Parent=gene-IXO1088_000430;Dbxref=NCBI_GP:QIE14278.1;Name=QIE14278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089143.1;locus_tag=IXO1088_000430;product=HrpE/YscL family type III secretion apparatus protein;protein_id=QIE14278.1;transl_table=11 CP040687.1 Genbank gene 77585 78913 . + . ID=gene-IXO1088_000435;Name=IXO1088_000435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000435 CP040687.1 Protein Homology CDS 77585 78913 . + 0 ID=cds-QIE14279.1;Parent=gene-IXO1088_000435;Dbxref=NCBI_GP:QIE14279.1;Name=QIE14279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636610.1;locus_tag=IXO1088_000435;product=EscN/YscN/HrcN family type III secretion system ATPase;protein_id=QIE14279.1;transl_table=11 CP040687.1 Genbank gene 78906 79415 . + . ID=gene-IXO1088_000440;Name=IXO1088_000440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000440 CP040687.1 Protein Homology CDS 78906 79415 . + 0 ID=cds-QIE14280.1;Parent=gene-IXO1088_000440;Dbxref=NCBI_GP:QIE14280.1;Name=QIE14280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050300.1;locus_tag=IXO1088_000440;product=type III secretion protein HrpB7;protein_id=QIE14280.1;transl_table=11 CP040687.1 Genbank gene 79412 80242 . + . ID=gene-IXO1088_000445;Name=IXO1088_000445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000445 CP040687.1 Protein Homology CDS 79412 80242 . + 0 ID=cds-QIE14281.1;Parent=gene-IXO1088_000445;Dbxref=NCBI_GP:QIE14281.1;Name=QIE14281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636612.1;locus_tag=IXO1088_000445;product=EscT/YscT/HrcT family type III secretion system export apparatus protein;protein_id=QIE14281.1;transl_table=11 CP040687.1 Genbank gene 80325 82142 . + . ID=gene-IXO1088_000450;Name=IXO1088_000450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000450 CP040687.1 Protein Homology CDS 80325 82142 . + 0 ID=cds-QIE14282.1;Parent=gene-IXO1088_000450;Dbxref=NCBI_GP:QIE14282.1;Name=QIE14282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636613.1;locus_tag=IXO1088_000450;product=EscC/YscC/HrcC family type III secretion system outer membrane ring protein;protein_id=QIE14282.1;transl_table=11 CP040687.1 Genbank gene 82881 83312 . - . ID=gene-IXO1088_000455;Name=IXO1088_000455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000455 CP040687.1 Protein Homology CDS 82881 83312 . - 0 ID=cds-QIE14283.1;Parent=gene-IXO1088_000455;Dbxref=NCBI_GP:QIE14283.1;Name=QIE14283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257092.1;locus_tag=IXO1088_000455;product=hypothetical protein;protein_id=QIE14283.1;transl_table=11 CP040687.1 Genbank gene 83688 84251 . + . ID=gene-IXO1088_000460;Name=IXO1088_000460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000460 CP040687.1 Protein Homology CDS 83688 84251 . + 0 ID=cds-QIE14284.1;Parent=gene-IXO1088_000460;Dbxref=NCBI_GP:QIE14284.1;Name=QIE14284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156519.1;locus_tag=IXO1088_000460;product=lytic transglycosylase domain-containing protein;protein_id=QIE14284.1;transl_table=11 CP040687.1 Genbank gene 84715 86268 . - . ID=gene-IXO1088_000465;Name=IXO1088_000465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000465 CP040687.1 Protein Homology CDS 84715 86268 . - 0 ID=cds-QIE14285.1;Parent=gene-IXO1088_000465;Dbxref=NCBI_GP:QIE14285.1;Name=QIE14285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304790.1;locus_tag=IXO1088_000465;product=hypothetical protein;protein_id=QIE14285.1;transl_table=11 CP040687.1 Genbank pseudogene 86409 86609 . - . ID=gene-IXO1088_000470;Name=IXO1088_000470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000470;pseudo=true CP040687.1 Protein Homology CDS 86409 86609 . - 0 ID=cds-IXO1088_000470;Parent=gene-IXO1088_000470;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050304.1;locus_tag=IXO1088_000470;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 87280 88338 . - . ID=gene-IXO1088_000475;Name=IXO1088_000475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000475;pseudo=true CP040687.1 Protein Homology CDS 87280 88338 . - 0 ID=cds-IXO1088_000475;Parent=gene-IXO1088_000475;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408472.1;locus_tag=IXO1088_000475;product=IS630 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 88482 88823 . - . ID=gene-IXO1088_000480;Name=IXO1088_000480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000480 CP040687.1 Protein Homology CDS 88482 88823 . - 0 ID=cds-QIE14286.1;Parent=gene-IXO1088_000480;Dbxref=NCBI_GP:QIE14286.1;Name=QIE14286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974834.1;locus_tag=IXO1088_000480;product=HPF/RaiA family ribosome-associated protein;protein_id=QIE14286.1;transl_table=11 CP040687.1 Genbank gene 89008 91566 . + . ID=gene-IXO1088_000485;Name=IXO1088_000485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000485 CP040687.1 Protein Homology CDS 89008 91566 . + 0 ID=cds-QIE17809.1;Parent=gene-IXO1088_000485;Dbxref=NCBI_GP:QIE17809.1;Name=QIE17809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156521.1;locus_tag=IXO1088_000485;product=mechanosensitive ion channel family protein;protein_id=QIE17809.1;transl_table=11 CP040687.1 Genbank gene 91585 91845 . - . ID=gene-IXO1088_000490;Name=IXO1088_000490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000490 CP040687.1 Protein Homology CDS 91585 91845 . - 0 ID=cds-QIE14287.1;Parent=gene-IXO1088_000490;Dbxref=NCBI_GP:QIE14287.1;Name=QIE14287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407204.1;locus_tag=IXO1088_000490;product=hypothetical protein;protein_id=QIE14287.1;transl_table=11 CP040687.1 Genbank gene 91905 92668 . + . ID=gene-IXO1088_000495;Name=IXO1088_000495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000495 CP040687.1 Protein Homology CDS 91905 92220 . + 0 ID=cds-QIE14288.1;Parent=gene-IXO1088_000495;Dbxref=NCBI_GP:QIE14288.1;Name=QIE14288.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_000495;product=IS5 family transposase;protein_id=QIE14288.1;transl_table=11 CP040687.1 Protein Homology CDS 92220 92668 . + 2 ID=cds-QIE14288.1;Parent=gene-IXO1088_000495;Dbxref=NCBI_GP:QIE14288.1;Name=QIE14288.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_000495;product=IS5 family transposase;protein_id=QIE14288.1;transl_table=11 CP040687.1 Genbank gene 92675 94399 . - . ID=gene-IXO1088_000500;Name=IXO1088_000500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000500 CP040687.1 Protein Homology CDS 92675 94399 . - 0 ID=cds-QIE14289.1;Parent=gene-IXO1088_000500;Dbxref=NCBI_GP:QIE14289.1;Name=QIE14289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635798.1;locus_tag=IXO1088_000500;product=AarF/ABC1/UbiB kinase family protein;protein_id=QIE14289.1;transl_table=11 CP040687.1 Genbank gene 94410 94622 . - . ID=gene-IXO1088_000505;Name=IXO1088_000505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000505 CP040687.1 Protein Homology CDS 94410 94622 . - 0 ID=cds-QIE14290.1;Parent=gene-IXO1088_000505;Dbxref=NCBI_GP:QIE14290.1;Name=QIE14290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486451.1;locus_tag=IXO1088_000505;product=hypothetical protein;protein_id=QIE14290.1;transl_table=11 CP040687.1 Genbank gene 94640 95581 . + . ID=gene-IXO1088_000510;Name=IXO1088_000510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000510 CP040687.1 Protein Homology CDS 94640 95581 . + 0 ID=cds-QIE14291.1;Parent=gene-IXO1088_000510;Dbxref=NCBI_GP:QIE14291.1;Name=QIE14291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367950.1;locus_tag=IXO1088_000510;product=DUF808 domain-containing protein;protein_id=QIE14291.1;transl_table=11 CP040687.1 Genbank gene 95774 97138 . + . ID=gene-IXO1088_000515;Name=IXO1088_000515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000515 CP040687.1 Protein Homology CDS 95774 97138 . + 0 ID=cds-QIE14292.1;Parent=gene-IXO1088_000515;Dbxref=NCBI_GP:QIE14292.1;Name=QIE14292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301290.1;locus_tag=IXO1088_000515;product=glycoside hydrolase family 10 protein;protein_id=QIE14292.1;transl_table=11 CP040687.1 Genbank gene 97135 98763 . - . ID=gene-IXO1088_000520;Name=IXO1088_000520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000520 CP040687.1 Protein Homology CDS 97135 98763 . - 0 ID=cds-QIE14293.1;Parent=gene-IXO1088_000520;Dbxref=NCBI_GP:QIE14293.1;Name=QIE14293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635801.1;locus_tag=IXO1088_000520;product=diguanylate cyclase;protein_id=QIE14293.1;transl_table=11 CP040687.1 Genbank gene 99237 100820 . + . ID=gene-IXO1088_000525;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=IXO1088_000525 CP040687.1 Protein Homology CDS 99237 100820 . + 0 ID=cds-QIE14294.1;Parent=gene-IXO1088_000525;Dbxref=NCBI_GP:QIE14294.1;Name=QIE14294.1;gbkey=CDS;gene=glgA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575489.1;locus_tag=IXO1088_000525;product=glycogen synthase GlgA;protein_id=QIE14294.1;transl_table=11 CP040687.1 Genbank gene 100817 103051 . + . ID=gene-IXO1088_000530;Name=IXO1088_000530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000530 CP040687.1 Protein Homology CDS 100817 103051 . + 0 ID=cds-QIE14295.1;Parent=gene-IXO1088_000530;Dbxref=NCBI_GP:QIE14295.1;Name=QIE14295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161584.1;locus_tag=IXO1088_000530;product=1%2C4-alpha-glucan branching enzyme;protein_id=QIE14295.1;transl_table=11 CP040687.1 Genbank gene 103054 104811 . + . ID=gene-IXO1088_000535;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=IXO1088_000535 CP040687.1 Protein Homology CDS 103054 104811 . + 0 ID=cds-QIE14296.1;Parent=gene-IXO1088_000535;Dbxref=NCBI_GP:QIE14296.1;Name=QIE14296.1;gbkey=CDS;gene=treZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635804.1;locus_tag=IXO1088_000535;product=malto-oligosyltrehalose trehalohydrolase;protein_id=QIE14296.1;transl_table=11 CP040687.1 Genbank gene 104868 106757 . + . ID=gene-IXO1088_000540;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=IXO1088_000540 CP040687.1 Protein Homology CDS 104868 106757 . + 0 ID=cds-QIE17810.1;Parent=gene-IXO1088_000540;Dbxref=NCBI_GP:QIE17810.1;Name=QIE17810.1;gbkey=CDS;gene=malQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005928394.1;locus_tag=IXO1088_000540;product=4-alpha-glucanotransferase;protein_id=QIE17810.1;transl_table=11 CP040687.1 Genbank gene 106754 109363 . + . ID=gene-IXO1088_000545;Name=treY;gbkey=Gene;gene=treY;gene_biotype=protein_coding;locus_tag=IXO1088_000545 CP040687.1 Protein Homology CDS 106754 109363 . + 0 ID=cds-QIE14297.1;Parent=gene-IXO1088_000545;Dbxref=NCBI_GP:QIE14297.1;Name=QIE14297.1;gbkey=CDS;gene=treY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505122.1;locus_tag=IXO1088_000545;product=malto-oligosyltrehalose synthase;protein_id=QIE14297.1;transl_table=11 CP040687.1 Genbank gene 109386 109571 . + . ID=gene-IXO1088_000550;Name=IXO1088_000550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000550 CP040687.1 Protein Homology CDS 109386 109571 . + 0 ID=cds-QIE14298.1;Parent=gene-IXO1088_000550;Dbxref=NCBI_GP:QIE14298.1;Name=QIE14298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158479.1;locus_tag=IXO1088_000550;product=DUF2934 domain-containing protein;protein_id=QIE14298.1;transl_table=11 CP040687.1 Genbank gene 109686 111848 . + . ID=gene-IXO1088_000555;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=IXO1088_000555 CP040687.1 Protein Homology CDS 109686 111848 . + 0 ID=cds-QIE14299.1;Parent=gene-IXO1088_000555;Dbxref=NCBI_GP:QIE14299.1;Name=QIE14299.1;gbkey=CDS;gene=glgX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635808.1;locus_tag=IXO1088_000555;product=glycogen debranching protein GlgX;protein_id=QIE14299.1;transl_table=11 CP040687.1 Genbank gene 111865 112497 . + . ID=gene-IXO1088_000560;Name=IXO1088_000560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000560 CP040687.1 Protein Homology CDS 111865 112497 . + 0 ID=cds-QIE14300.1;Parent=gene-IXO1088_000560;Dbxref=NCBI_GP:QIE14300.1;Name=QIE14300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301281.1;locus_tag=IXO1088_000560;product=NAD-dependent epimerase/dehydratase family protein;protein_id=QIE14300.1;transl_table=11 CP040687.1 Genbank gene 112661 113158 . + . ID=gene-IXO1088_000565;Name=IXO1088_000565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000565 CP040687.1 GeneMarkS-2+ CDS 112661 113158 . + 0 ID=cds-QIE14301.1;Parent=gene-IXO1088_000565;Dbxref=NCBI_GP:QIE14301.1;Name=QIE14301.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_000565;product=hypothetical protein;protein_id=QIE14301.1;transl_table=11 CP040687.1 Genbank gene 113210 113286 . + . ID=gene-IXO1088_000570;Name=IXO1088_000570;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_000570 CP040687.1 cmsearch ncRNA 113210 113286 . + . ID=rna-IXO1088_000570;Parent=gene-IXO1088_000570;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_000570;product=sX9 sRNA CP040687.1 cmsearch exon 113210 113286 . + . ID=exon-IXO1088_000570-1;Parent=rna-IXO1088_000570;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_000570;product=sX9 sRNA CP040687.1 Genbank gene 113299 114345 . - . ID=gene-IXO1088_000575;Name=IXO1088_000575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000575 CP040687.1 Protein Homology CDS 113299 114345 . - 0 ID=cds-QIE14302.1;Parent=gene-IXO1088_000575;Dbxref=NCBI_GP:QIE14302.1;Name=QIE14302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449750.1;locus_tag=IXO1088_000575;product=methylamine utilization protein;protein_id=QIE14302.1;transl_table=11 CP040687.1 Genbank gene 114463 115782 . - . ID=gene-IXO1088_000580;Name=IXO1088_000580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000580 CP040687.1 Protein Homology CDS 114463 115782 . - 0 ID=cds-QIE14303.1;Parent=gene-IXO1088_000580;Dbxref=NCBI_GP:QIE14303.1;Name=QIE14303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_000580;product=IS701 family transposase;protein_id=QIE14303.1;transl_table=11 CP040687.1 Genbank gene 115926 116204 . + . ID=gene-IXO1088_000585;Name=IXO1088_000585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000585 CP040687.1 GeneMarkS-2+ CDS 115926 116204 . + 0 ID=cds-QIE14304.1;Parent=gene-IXO1088_000585;Dbxref=NCBI_GP:QIE14304.1;Name=QIE14304.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_000585;product=hypothetical protein;protein_id=QIE14304.1;transl_table=11 CP040687.1 Genbank gene 116201 117166 . - . ID=gene-IXO1088_000590;Name=IXO1088_000590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000590 CP040687.1 Protein Homology CDS 116201 117166 . - 0 ID=cds-QIE14305.1;Parent=gene-IXO1088_000590;Dbxref=NCBI_GP:QIE14305.1;Name=QIE14305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_000590;product=IS1595-like element ISXo5 family transposase;protein_id=QIE14305.1;transl_table=11 CP040687.1 Genbank pseudogene 117264 118055 . + . ID=gene-IXO1088_000595;Name=IXO1088_000595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000595;pseudo=true CP040687.1 Protein Homology CDS 117264 118055 . + 0 ID=cds-IXO1088_000595;Parent=gene-IXO1088_000595;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407194.1;locus_tag=IXO1088_000595;product=RHS repeat protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 118255 120657 . + . ID=gene-IXO1088_000600;Name=IXO1088_000600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000600 CP040687.1 Protein Homology CDS 118255 120657 . + 0 ID=cds-QIE14306.1;Parent=gene-IXO1088_000600;Dbxref=NCBI_GP:QIE14306.1;Name=QIE14306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_000600;product=IS701 family transposase;protein_id=QIE14306.1;transl_table=11 CP040687.1 Genbank gene 120773 121231 . + . ID=gene-IXO1088_000605;Name=IXO1088_000605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000605 CP040687.1 Protein Homology CDS 120773 121231 . + 0 ID=cds-QIE17811.1;Parent=gene-IXO1088_000605;Dbxref=NCBI_GP:QIE17811.1;Name=QIE17811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011212121.1;locus_tag=IXO1088_000605;product=hypothetical protein;protein_id=QIE17811.1;transl_table=11 CP040687.1 Genbank gene 121231 121563 . + . ID=gene-IXO1088_000610;Name=IXO1088_000610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000610 CP040687.1 GeneMarkS-2+ CDS 121231 121563 . + 0 ID=cds-QIE14307.1;Parent=gene-IXO1088_000610;Dbxref=NCBI_GP:QIE14307.1;Name=QIE14307.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_000610;product=hypothetical protein;protein_id=QIE14307.1;transl_table=11 CP040687.1 Genbank gene 121580 121840 . + . ID=gene-IXO1088_000615;Name=IXO1088_000615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000615 CP040687.1 Protein Homology CDS 121580 121840 . + 0 ID=cds-QIE14308.1;Parent=gene-IXO1088_000615;Dbxref=NCBI_GP:QIE14308.1;Name=QIE14308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257122.1;locus_tag=IXO1088_000615;product=hypothetical protein;protein_id=QIE14308.1;transl_table=11 CP040687.1 Genbank gene 122791 124005 . - . ID=gene-IXO1088_000620;Name=IXO1088_000620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000620 CP040687.1 Protein Homology CDS 122791 124005 . - 0 ID=cds-QIE14309.1;Parent=gene-IXO1088_000620;Dbxref=NCBI_GP:QIE14309.1;Name=QIE14309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1088_000620;product=IS4-like element ISXo14 family transposase;protein_id=QIE14309.1;transl_table=11 CP040687.1 Genbank pseudogene 124042 124137 . + . ID=gene-IXO1088_000625;Name=IXO1088_000625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000625;pseudo=true CP040687.1 Protein Homology CDS 124042 124137 . + 0 ID=cds-IXO1088_000625;Parent=gene-IXO1088_000625;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257538.1;locus_tag=IXO1088_000625;product=alcohol dehydrogenase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 124193 124408 . - . ID=gene-IXO1088_000630;Name=IXO1088_000630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000630;pseudo=true CP040687.1 Protein Homology CDS 124193 124408 . - 0 ID=cds-IXO1088_000630;Parent=gene-IXO1088_000630;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301439.1;locus_tag=IXO1088_000630;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 124517 125926 . + . ID=gene-IXO1088_000635;Name=IXO1088_000635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000635 CP040687.1 Protein Homology CDS 124517 125926 . + 0 ID=cds-QIE14310.1;Parent=gene-IXO1088_000635;Dbxref=NCBI_GP:QIE14310.1;Name=QIE14310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901659.1;locus_tag=IXO1088_000635;product=FAD-binding protein;protein_id=QIE14310.1;transl_table=11 CP040687.1 Genbank gene 126275 126706 . + . ID=gene-IXO1088_000640;Name=IXO1088_000640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000640 CP040687.1 Protein Homology CDS 126275 126706 . + 0 ID=cds-QIE14311.1;Parent=gene-IXO1088_000640;Dbxref=NCBI_GP:QIE14311.1;Name=QIE14311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156537.1;locus_tag=IXO1088_000640;product=hypothetical protein;protein_id=QIE14311.1;transl_table=11 CP040687.1 Genbank gene 126981 127316 . + . ID=gene-IXO1088_000645;Name=IXO1088_000645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000645 CP040687.1 Protein Homology CDS 126981 127316 . + 0 ID=cds-QIE14312.1;Parent=gene-IXO1088_000645;Dbxref=NCBI_GP:QIE14312.1;Name=QIE14312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301442.1;locus_tag=IXO1088_000645;product=hypothetical protein;protein_id=QIE14312.1;transl_table=11 CP040687.1 Genbank pseudogene 127313 127534 . + . ID=gene-IXO1088_000650;Name=IXO1088_000650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000650;pseudo=true CP040687.1 Protein Homology CDS 127313 127534 . + 0 ID=cds-IXO1088_000650;Parent=gene-IXO1088_000650;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346135.1;locus_tag=IXO1088_000650;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 127756 129045 . - . ID=gene-IXO1088_000655;Name=IXO1088_000655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000655 CP040687.1 Protein Homology CDS 127756 129045 . - 0 ID=cds-QIE14313.1;Parent=gene-IXO1088_000655;Dbxref=NCBI_GP:QIE14313.1;Name=QIE14313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635819.1;locus_tag=IXO1088_000655;product=DEAD/DEAH box helicase;protein_id=QIE14313.1;transl_table=11 CP040687.1 Genbank gene 129053 129304 . - . ID=gene-IXO1088_000660;Name=IXO1088_000660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000660 CP040687.1 Protein Homology CDS 129053 129304 . - 0 ID=cds-QIE14314.1;Parent=gene-IXO1088_000660;Dbxref=NCBI_GP:QIE14314.1;Name=QIE14314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501667.1;locus_tag=IXO1088_000660;product=hypothetical protein;protein_id=QIE14314.1;transl_table=11 CP040687.1 Genbank gene 129664 130644 . + . ID=gene-IXO1088_000665;Name=IXO1088_000665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000665 CP040687.1 Protein Homology CDS 129664 130644 . + 0 ID=cds-QIE14315.1;Parent=gene-IXO1088_000665;Dbxref=NCBI_GP:QIE14315.1;Name=QIE14315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257128.1;locus_tag=IXO1088_000665;product=IS5 family transposase;protein_id=QIE14315.1;transl_table=11 CP040687.1 Genbank gene 130593 130979 . + . ID=gene-IXO1088_000670;Name=IXO1088_000670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000670 CP040687.1 Protein Homology CDS 130593 130979 . + 0 ID=cds-QIE14316.1;Parent=gene-IXO1088_000670;Dbxref=NCBI_GP:QIE14316.1;Name=QIE14316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463293.1;locus_tag=IXO1088_000670;product=hypothetical protein;protein_id=QIE14316.1;transl_table=11 CP040687.1 Genbank gene 131110 131433 . + . ID=gene-IXO1088_000675;Name=IXO1088_000675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000675 CP040687.1 Protein Homology CDS 131110 131433 . + 0 ID=cds-QIE17812.1;Parent=gene-IXO1088_000675;Dbxref=NCBI_GP:QIE17812.1;Name=QIE17812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301443.1;locus_tag=IXO1088_000675;product=hypothetical protein;protein_id=QIE17812.1;transl_table=11 CP040687.1 Genbank gene 131375 131617 . + . ID=gene-IXO1088_000680;Name=IXO1088_000680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000680 CP040687.1 Protein Homology CDS 131375 131617 . + 0 ID=cds-QIE14317.1;Parent=gene-IXO1088_000680;Dbxref=NCBI_GP:QIE14317.1;Name=QIE14317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501670.1;locus_tag=IXO1088_000680;product=hypothetical protein;protein_id=QIE14317.1;transl_table=11 CP040687.1 Genbank pseudogene 131671 131997 . - . ID=gene-IXO1088_000685;Name=IXO1088_000685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000685;pseudo=true CP040687.1 Protein Homology CDS 131671 131997 . - 0 ID=cds-IXO1088_000685;Parent=gene-IXO1088_000685;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635821.1;locus_tag=IXO1088_000685;product=2-oxo acid dehydrogenase subunit E2;pseudo=true;transl_table=11 CP040687.1 Genbank gene 131993 132958 . - . ID=gene-IXO1088_000690;Name=IXO1088_000690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000690 CP040687.1 Protein Homology CDS 131993 132958 . - 0 ID=cds-QIE14318.1;Parent=gene-IXO1088_000690;Dbxref=NCBI_GP:QIE14318.1;Name=QIE14318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_000690;product=IS1595-like element ISXo5 family transposase;protein_id=QIE14318.1;transl_table=11 CP040687.1 Genbank gene 133189 133440 . - . ID=gene-IXO1088_000695;Name=IXO1088_000695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000695 CP040687.1 Protein Homology CDS 133189 133440 . - 0 ID=cds-QIE14319.1;Parent=gene-IXO1088_000695;Dbxref=NCBI_GP:QIE14319.1;Name=QIE14319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303428.1;locus_tag=IXO1088_000695;product=type I toxin-antitoxin system SymE family toxin;protein_id=QIE14319.1;transl_table=11 CP040687.1 Genbank pseudogene 133536 133751 . + . ID=gene-IXO1088_000700;Name=IXO1088_000700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000700;pseudo=true CP040687.1 Protein Homology CDS 133536 133751 . + 0 ID=cds-IXO1088_000700;Parent=gene-IXO1088_000700;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637260.1;locus_tag=IXO1088_000700;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 133893 134294 . - . ID=gene-IXO1088_000705;Name=IXO1088_000705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000705 CP040687.1 Protein Homology CDS 133893 134294 . - 0 ID=cds-QIE14320.1;Parent=gene-IXO1088_000705;Dbxref=NCBI_GP:QIE14320.1;Name=QIE14320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257150.1;locus_tag=IXO1088_000705;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=QIE14320.1;transl_table=11 CP040687.1 Genbank gene 134318 134548 . - . ID=gene-IXO1088_000710;Name=IXO1088_000710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000710 CP040687.1 Protein Homology CDS 134318 134548 . - 0 ID=cds-QIE14321.1;Parent=gene-IXO1088_000710;Dbxref=NCBI_GP:QIE14321.1;Name=QIE14321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574056.1;locus_tag=IXO1088_000710;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=QIE14321.1;transl_table=11 CP040687.1 Genbank gene 134615 135277 . - . ID=gene-IXO1088_000715;Name=IXO1088_000715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000715 CP040687.1 Protein Homology CDS 134615 135277 . - 0 ID=cds-QIE14322.1;Parent=gene-IXO1088_000715;Dbxref=NCBI_GP:QIE14322.1;Name=QIE14322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158077.1;locus_tag=IXO1088_000715;product=hemolysin III family protein;protein_id=QIE14322.1;transl_table=11 CP040687.1 Genbank gene 135542 137950 . + . ID=gene-IXO1088_000720;Name=IXO1088_000720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000720 CP040687.1 Protein Homology CDS 135542 137950 . + 0 ID=cds-QIE17813.1;Parent=gene-IXO1088_000720;Dbxref=NCBI_GP:QIE17813.1;Name=QIE17813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635449.1;locus_tag=IXO1088_000720;product=DEAD/DEAH box helicase;protein_id=QIE17813.1;transl_table=11 CP040687.1 Genbank gene 137947 139773 . + . ID=gene-IXO1088_000725;Name=IXO1088_000725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000725 CP040687.1 Protein Homology CDS 137947 139773 . + 0 ID=cds-QIE14323.1;Parent=gene-IXO1088_000725;Dbxref=NCBI_GP:QIE14323.1;Name=QIE14323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501376.1;locus_tag=IXO1088_000725;product=exonuclease;protein_id=QIE14323.1;transl_table=11 CP040687.1 Genbank gene 140262 142406 . - . ID=gene-IXO1088_000730;Name=IXO1088_000730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000730 CP040687.1 Protein Homology CDS 140262 142406 . - 0 ID=cds-QIE14324.1;Parent=gene-IXO1088_000730;Dbxref=NCBI_GP:QIE14324.1;Name=QIE14324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501374.1;locus_tag=IXO1088_000730;product=avirulence protein;protein_id=QIE14324.1;transl_table=11 CP040687.1 Genbank gene 142597 143754 . - . ID=gene-IXO1088_000735;Name=IXO1088_000735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000735 CP040687.1 Protein Homology CDS 142597 143754 . - 0 ID=cds-QIE14325.1;Parent=gene-IXO1088_000735;Dbxref=NCBI_GP:QIE14325.1;Name=QIE14325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635446.1;locus_tag=IXO1088_000735;product=ROK family protein;protein_id=QIE14325.1;transl_table=11 CP040687.1 Genbank gene 143927 146515 . + . ID=gene-IXO1088_000740;Name=IXO1088_000740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000740 CP040687.1 Protein Homology CDS 143927 146515 . + 0 ID=cds-QIE14326.1;Parent=gene-IXO1088_000740;Dbxref=NCBI_GP:QIE14326.1;Name=QIE14326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809741.1;locus_tag=IXO1088_000740;product=TonB-dependent receptor;protein_id=QIE14326.1;transl_table=11 CP040687.1 Genbank gene 146526 147311 . + . ID=gene-IXO1088_000745;Name=IXO1088_000745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000745 CP040687.1 Protein Homology CDS 146526 147311 . + 0 ID=cds-QIE14327.1;Parent=gene-IXO1088_000745;Dbxref=NCBI_GP:QIE14327.1;Name=QIE14327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635444.1;locus_tag=IXO1088_000745;product=DUF1868 domain-containing protein;protein_id=QIE14327.1;transl_table=11 CP040687.1 Genbank gene 147625 148764 . - . ID=gene-IXO1088_000750;Name=IXO1088_000750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000750 CP040687.1 Protein Homology CDS 147625 148764 . - 0 ID=cds-QIE17814.1;Parent=gene-IXO1088_000750;Dbxref=NCBI_GP:QIE17814.1;Name=QIE17814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635443.1;locus_tag=IXO1088_000750;product=saccharopine dehydrogenase;protein_id=QIE17814.1;transl_table=11 CP040687.1 Genbank pseudogene 148861 149257 . - . ID=gene-IXO1088_000755;Name=IXO1088_000755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000755;pseudo=true CP040687.1 Protein Homology CDS 148861 149257 . - 0 ID=cds-IXO1088_000755;Parent=gene-IXO1088_000755;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017170093.1;locus_tag=IXO1088_000755;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 149373 149537 . + . ID=gene-IXO1088_000760;Name=IXO1088_000760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000760;pseudo=true CP040687.1 Protein Homology CDS 149373 149537 . + 0 ID=cds-IXO1088_000760;Parent=gene-IXO1088_000760;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572908.1;locus_tag=IXO1088_000760;product=NmrA/HSCARG family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 149915 150220 . + . ID=gene-IXO1088_000765;Name=IXO1088_000765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000765 CP040687.1 Protein Homology CDS 149915 150220 . + 0 ID=cds-QIE14328.1;Parent=gene-IXO1088_000765;Dbxref=NCBI_GP:QIE14328.1;Name=QIE14328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901594.1;locus_tag=IXO1088_000765;product=hypothetical protein;protein_id=QIE14328.1;transl_table=11 CP040687.1 Genbank gene 150438 151601 . - . ID=gene-IXO1088_000770;Name=IXO1088_000770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000770 CP040687.1 Protein Homology CDS 150438 151601 . - 0 ID=cds-QIE14329.1;Parent=gene-IXO1088_000770;Dbxref=NCBI_GP:QIE14329.1;Name=QIE14329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482131.1;locus_tag=IXO1088_000770;product=DNA topoisomerase IB;protein_id=QIE14329.1;transl_table=11 CP040687.1 Genbank gene 151748 152128 . + . ID=gene-IXO1088_000775;Name=IXO1088_000775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000775 CP040687.1 Protein Homology CDS 151748 152128 . + 0 ID=cds-QIE14330.1;Parent=gene-IXO1088_000775;Dbxref=NCBI_GP:QIE14330.1;Name=QIE14330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159672.1;locus_tag=IXO1088_000775;product=Elastase inhibitor AFLEI Flags: Precursor;protein_id=QIE14330.1;transl_table=11 CP040687.1 Genbank gene 152330 156802 . + . ID=gene-IXO1088_000780;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=IXO1088_000780 CP040687.1 Protein Homology CDS 152330 156802 . + 0 ID=cds-QIE14331.1;Parent=gene-IXO1088_000780;Dbxref=NCBI_GP:QIE14331.1;Name=QIE14331.1;gbkey=CDS;gene=gltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635427.1;locus_tag=IXO1088_000780;product=glutamate synthase large subunit;protein_id=QIE14331.1;transl_table=11 CP040687.1 Genbank gene 156997 158478 . + . ID=gene-IXO1088_000785;Name=IXO1088_000785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000785 CP040687.1 Protein Homology CDS 156997 158478 . + 0 ID=cds-QIE14332.1;Parent=gene-IXO1088_000785;Dbxref=NCBI_GP:QIE14332.1;Name=QIE14332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635426.1;locus_tag=IXO1088_000785;product=glutamate synthase small subunit;protein_id=QIE14332.1;transl_table=11 CP040687.1 Genbank pseudogene 158721 159101 . + . ID=gene-IXO1088_000790;Name=IXO1088_000790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000790;pseudo=true CP040687.1 Protein Homology CDS 158721 159101 . + 0 ID=cds-IXO1088_000790;Parent=gene-IXO1088_000790;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635523.1;locus_tag=IXO1088_000790;product=IS4 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 159132 159707 . + . ID=gene-IXO1088_000795;Name=IXO1088_000795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000795;pseudo=true CP040687.1 Protein Homology CDS 159132 159707 . + 0 ID=cds-IXO1088_000795;Parent=gene-IXO1088_000795;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503735.1;locus_tag=IXO1088_000795;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 159716 160751 . - . ID=gene-IXO1088_000800;Name=IXO1088_000800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000800;pseudo=true CP040687.1 Protein Homology CDS 159716 160751 . - 0 ID=cds-IXO1088_000800;Parent=gene-IXO1088_000800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_000800;product=IS1595 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 160841 161296 . + . ID=gene-IXO1088_000805;Name=IXO1088_000805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000805;pseudo=true CP040687.1 Protein Homology CDS 160841 161296 . + 0 ID=cds-IXO1088_000805;Parent=gene-IXO1088_000805;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407232.1;locus_tag=IXO1088_000805;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 161304 162161 . + . ID=gene-IXO1088_000810;Name=IXO1088_000810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000810;pseudo=true CP040687.1 Protein Homology CDS 161304 162161 . + 0 ID=cds-IXO1088_000810;Parent=gene-IXO1088_000810;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1088_000810;product=IS4 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 162185 162325 . - . ID=gene-IXO1088_000815;Name=IXO1088_000815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000815;pseudo=true CP040687.1 Protein Homology CDS 162185 162325 . - 0 ID=cds-IXO1088_000815;Parent=gene-IXO1088_000815;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408472.1;locus_tag=IXO1088_000815;product=IS630 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 162373 163749 . - . ID=gene-IXO1088_000820;Name=IXO1088_000820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000820 CP040687.1 Protein Homology CDS 162373 163749 . - 0 ID=cds-QIE17815.1;Parent=gene-IXO1088_000820;Dbxref=NCBI_GP:QIE17815.1;Name=QIE17815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1088_000820;product=IS5 family transposase;protein_id=QIE17815.1;transl_table=11 CP040687.1 Genbank pseudogene 164076 164749 . - . ID=gene-IXO1088_000825;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=pseudogene;locus_tag=IXO1088_000825;pseudo=true CP040687.1 Protein Homology CDS 164076 164749 . - 0 ID=cds-IXO1088_000825;Parent=gene-IXO1088_000825;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;gene=kduI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635546.1;locus_tag=IXO1088_000825;product=5-dehydro-4-deoxy-D-glucuronate isomerase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 165151 166218 . - . ID=gene-IXO1088_000830;Name=IXO1088_000830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000830 CP040687.1 Protein Homology CDS 165151 166218 . - 0 ID=cds-QIE14333.1;Parent=gene-IXO1088_000830;Dbxref=NCBI_GP:QIE14333.1;Name=QIE14333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635545.1;locus_tag=IXO1088_000830;product=LacI family DNA-binding transcriptional regulator;protein_id=QIE14333.1;transl_table=11 CP040687.1 Genbank gene 166174 166371 . + . ID=gene-IXO1088_000835;Name=IXO1088_000835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000835 CP040687.1 Protein Homology CDS 166174 166371 . + 0 ID=cds-QIE14334.1;Parent=gene-IXO1088_000835;Dbxref=NCBI_GP:QIE14334.1;Name=QIE14334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501465.1;locus_tag=IXO1088_000835;product=hypothetical protein;protein_id=QIE14334.1;transl_table=11 CP040687.1 Genbank gene 166353 166475 . - . ID=gene-IXO1088_000840;Name=IXO1088_000840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000840 CP040687.1 GeneMarkS-2+ CDS 166353 166475 . - 0 ID=cds-QIE14335.1;Parent=gene-IXO1088_000840;Dbxref=NCBI_GP:QIE14335.1;Name=QIE14335.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_000840;product=xylosidase;protein_id=QIE14335.1;transl_table=11 CP040687.1 Genbank gene 166424 166951 . - . ID=gene-IXO1088_000845;Name=IXO1088_000845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000845 CP040687.1 Protein Homology CDS 166424 166951 . - 0 ID=cds-QIE14336.1;Parent=gene-IXO1088_000845;Dbxref=NCBI_GP:QIE14336.1;Name=QIE14336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501464.1;locus_tag=IXO1088_000845;product=xylosidase;protein_id=QIE14336.1;transl_table=11 CP040687.1 Genbank pseudogene 166890 167021 . + . ID=gene-IXO1088_000850;Name=IXO1088_000850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000850;pseudo=true CP040687.1 Protein Homology CDS 166890 167021 . + 0 ID=cds-IXO1088_000850;Parent=gene-IXO1088_000850;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169647.1;locus_tag=IXO1088_000850;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 167128 167600 . - . ID=gene-IXO1088_000855;Name=IXO1088_000855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000855;pseudo=true CP040687.1 Protein Homology CDS 167128 167600 . - 0 ID=cds-IXO1088_000855;Parent=gene-IXO1088_000855;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113223.1;locus_tag=IXO1088_000855;product=metallophosphoesterase family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 167774 169957 . - . ID=gene-IXO1088_000860;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=IXO1088_000860 CP040687.1 Protein Homology CDS 167774 169957 . - 0 ID=cds-QIE14337.1;Parent=gene-IXO1088_000860;Dbxref=NCBI_GP:QIE14337.1;Name=QIE14337.1;gbkey=CDS;gene=glgB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302960.1;locus_tag=IXO1088_000860;product=1%2C4-alpha-glucan branching protein GlgB;protein_id=QIE14337.1;transl_table=11 CP040687.1 Genbank gene 169969 173319 . - . ID=gene-IXO1088_000865;Name=treS;gbkey=Gene;gene=treS;gene_biotype=protein_coding;locus_tag=IXO1088_000865 CP040687.1 Protein Homology CDS 169969 173319 . - 0 ID=cds-QIE14338.1;Parent=gene-IXO1088_000865;Dbxref=NCBI_GP:QIE14338.1;Name=QIE14338.1;gbkey=CDS;gene=treS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501461.1;locus_tag=IXO1088_000865;product=maltose alpha-D-glucosyltransferase;protein_id=QIE14338.1;transl_table=11 CP040687.1 Genbank gene 173316 176432 . - . ID=gene-IXO1088_000870;Name=IXO1088_000870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000870 CP040687.1 Protein Homology CDS 173316 176432 . - 0 ID=cds-QIE14339.1;Parent=gene-IXO1088_000870;Dbxref=NCBI_GP:QIE14339.1;Name=QIE14339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635528.2;locus_tag=IXO1088_000870;product=DUF3416 domain-containing protein;protein_id=QIE14339.1;transl_table=11 CP040687.1 Genbank pseudogene 176645 176964 . + . ID=gene-IXO1088_000875;Name=IXO1088_000875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000875;pseudo=true CP040687.1 Protein Homology CDS 176645 176964 . + 0 ID=cds-IXO1088_000875;Parent=gene-IXO1088_000875;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113225.1;locus_tag=IXO1088_000875;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 177193 178020 . - . ID=gene-IXO1088_000880;Name=IXO1088_000880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000880;pseudo=true CP040687.1 Protein Homology CDS 177193 178020 . - 0 ID=cds-IXO1088_000880;Parent=gene-IXO1088_000880;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612183.1;locus_tag=IXO1088_000880;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 178023 178145 . - . ID=gene-IXO1088_000885;Name=IXO1088_000885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000885;pseudo=true CP040687.1 Protein Homology CDS 178023 178145 . - 0 ID=cds-IXO1088_000885;Parent=gene-IXO1088_000885;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408523.1;locus_tag=IXO1088_000885;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 178109 178297 . + . ID=gene-IXO1088_000890;Name=IXO1088_000890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000890;pseudo=true CP040687.1 Protein Homology CDS 178109 178297 . + 0 ID=cds-IXO1088_000890;Parent=gene-IXO1088_000890;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557964.1;locus_tag=IXO1088_000890;product=IS256 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 178386 179186 . + . ID=gene-IXO1088_000895;Name=IXO1088_000895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000895;pseudo=true CP040687.1 Protein Homology CDS 178386 179186 . + 0 ID=cds-IXO1088_000895;Parent=gene-IXO1088_000895;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_000895;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 179306 179446 . - . ID=gene-IXO1088_000900;Name=IXO1088_000900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000900;pseudo=true CP040687.1 Protein Homology CDS 179306 179446 . - 0 ID=cds-IXO1088_000900;Parent=gene-IXO1088_000900;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409568.1;locus_tag=IXO1088_000900;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 179392 180711 . - . ID=gene-IXO1088_000905;Name=IXO1088_000905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000905 CP040687.1 Protein Homology CDS 179392 180711 . - 0 ID=cds-QIE14340.1;Parent=gene-IXO1088_000905;Dbxref=NCBI_GP:QIE14340.1;Name=QIE14340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_000905;product=IS701 family transposase;protein_id=QIE14340.1;transl_table=11 CP040687.1 Genbank gene 180911 181879 . - . ID=gene-IXO1088_000910;Name=IXO1088_000910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000910 CP040687.1 Protein Homology CDS 180911 181879 . - 0 ID=cds-QIE14341.1;Parent=gene-IXO1088_000910;Dbxref=NCBI_GP:QIE14341.1;Name=QIE14341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_000910;product=IS5-like element ISXo1 family transposase;protein_id=QIE14341.1;transl_table=11 CP040687.1 Genbank gene 182029 183348 . - . ID=gene-IXO1088_000915;Name=IXO1088_000915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000915 CP040687.1 Protein Homology CDS 182029 183348 . - 0 ID=cds-QIE14342.1;Parent=gene-IXO1088_000915;Dbxref=NCBI_GP:QIE14342.1;Name=QIE14342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_000915;product=IS701 family transposase;protein_id=QIE14342.1;transl_table=11 CP040687.1 Genbank gene 183433 183522 . + . ID=gene-IXO1088_000920;Name=IXO1088_000920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000920 CP040687.1 Protein Homology CDS 183433 183522 . + 0 ID=cds-QIE17816.1;Parent=gene-IXO1088_000920;Dbxref=NCBI_GP:QIE17816.1;Name=QIE17816.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF15572.4;locus_tag=IXO1088_000920;product=hypothetical protein;protein_id=QIE17816.1;transl_table=11 CP040687.1 Genbank gene 183538 183705 . + . ID=gene-IXO1088_000925;Name=IXO1088_000925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000925 CP040687.1 Protein Homology CDS 183538 183705 . + 0 ID=cds-QIE14343.1;Parent=gene-IXO1088_000925;Dbxref=NCBI_GP:QIE14343.1;Name=QIE14343.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13332.4;locus_tag=IXO1088_000925;product=hypothetical protein;protein_id=QIE14343.1;transl_table=11 CP040687.1 Genbank gene 183788 185263 . + . ID=gene-IXO1088_000930;Name=IXO1088_000930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000930 CP040687.1 Protein Homology CDS 183788 185263 . + 0 ID=cds-QIE14344.1;Parent=gene-IXO1088_000930;Dbxref=NCBI_GP:QIE14344.1;Name=QIE14344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1088_000930;product=IS5-like element ISXoo5 family transposase;protein_id=QIE14344.1;transl_table=11 CP040687.1 Genbank pseudogene 185402 186778 . + . ID=gene-IXO1088_000935;Name=IXO1088_000935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000935;pseudo=true CP040687.1 Protein Homology CDS 185402 186778 . + 0 ID=cds-IXO1088_000935;Parent=gene-IXO1088_000935;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1088_000935;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 186872 188392 . - . ID=gene-IXO1088_000940;Name=IXO1088_000940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000940 CP040687.1 Protein Homology CDS 186872 188392 . - 0 ID=cds-QIE14345.1;Parent=gene-IXO1088_000940;Dbxref=NCBI_GP:QIE14345.1;Name=QIE14345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639214.1;locus_tag=IXO1088_000940;product=ATP-dependent protease;protein_id=QIE14345.1;transl_table=11 CP040687.1 Genbank gene 188409 188687 . - . ID=gene-IXO1088_000945;Name=IXO1088_000945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000945 CP040687.1 Protein Homology CDS 188409 188687 . - 0 ID=cds-QIE14346.1;Parent=gene-IXO1088_000945;Dbxref=NCBI_GP:QIE14346.1;Name=QIE14346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156738.1;locus_tag=IXO1088_000945;product=accessory factor UbiK family protein;protein_id=QIE14346.1;transl_table=11 CP040687.1 Genbank gene 188877 189215 . + . ID=gene-IXO1088_000950;Name=IXO1088_000950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000950 CP040687.1 Protein Homology CDS 188877 189215 . + 0 ID=cds-QIE17817.1;Parent=gene-IXO1088_000950;Dbxref=NCBI_GP:QIE17817.1;Name=QIE17817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639212.1;locus_tag=IXO1088_000950;product=P-II family nitrogen regulator;protein_id=QIE17817.1;transl_table=11 CP040687.1 Genbank pseudogene 189460 189647 . - . ID=gene-IXO1088_000955;Name=IXO1088_000955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000955;pseudo=true CP040687.1 Protein Homology CDS 189460 189647 . - 0 ID=cds-IXO1088_000955;Parent=gene-IXO1088_000955;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304964.1;locus_tag=IXO1088_000955;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 189828 191813 . + . ID=gene-IXO1088_000960;Name=IXO1088_000960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000960 CP040687.1 Protein Homology CDS 189828 191813 . + 0 ID=cds-QIE14347.1;Parent=gene-IXO1088_000960;Dbxref=NCBI_GP:QIE14347.1;Name=QIE14347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015471473.1;locus_tag=IXO1088_000960;product=beta-N-acetylglucosaminidase;protein_id=QIE14347.1;transl_table=11 CP040687.1 Genbank gene 191870 191946 . - . ID=gene-IXO1088_000965;Name=IXO1088_000965;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_000965 CP040687.1 cmsearch ncRNA 191870 191946 . - . ID=rna-IXO1088_000965;Parent=gene-IXO1088_000965;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_000965;product=sX9 sRNA CP040687.1 cmsearch exon 191870 191946 . - . ID=exon-IXO1088_000965-1;Parent=rna-IXO1088_000965;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_000965;product=sX9 sRNA CP040687.1 Genbank pseudogene 191939 192175 . - . ID=gene-IXO1088_000970;Name=IXO1088_000970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000970;pseudo=true CP040687.1 Protein Homology CDS 191939 192175 . - 0 ID=cds-IXO1088_000970;Parent=gene-IXO1088_000970;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156740.1;locus_tag=IXO1088_000970;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 192445 193407 . + . ID=gene-IXO1088_000975;Name=IXO1088_000975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000975 CP040687.1 Protein Homology CDS 192445 193407 . + 0 ID=cds-QIE14348.1;Parent=gene-IXO1088_000975;Dbxref=NCBI_GP:QIE14348.1;Name=QIE14348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1088_000975;product=IS1595-like element ISXo2 family transposase;protein_id=QIE14348.1;transl_table=11 CP040687.1 Genbank gene 193817 194629 . + . ID=gene-IXO1088_000980;Name=IXO1088_000980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000980 CP040687.1 Protein Homology CDS 193817 194629 . + 0 ID=cds-QIE17818.1;Parent=gene-IXO1088_000980;Dbxref=NCBI_GP:QIE17818.1;Name=QIE17818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914384.1;locus_tag=IXO1088_000980;product=porin family protein;protein_id=QIE17818.1;transl_table=11 CP040687.1 Genbank gene 194822 195433 . + . ID=gene-IXO1088_000985;Name=IXO1088_000985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_000985 CP040687.1 Protein Homology CDS 194822 195433 . + 0 ID=cds-QIE14349.1;Parent=gene-IXO1088_000985;Dbxref=NCBI_GP:QIE14349.1;Name=QIE14349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305069.1;locus_tag=IXO1088_000985;product=hypothetical protein;protein_id=QIE14349.1;transl_table=11 CP040687.1 Genbank gene 195850 196707 . - . ID=gene-IXO1088_000990;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=IXO1088_000990 CP040687.1 Protein Homology CDS 195850 196707 . - 0 ID=cds-QIE14350.1;Parent=gene-IXO1088_000990;Dbxref=NCBI_GP:QIE14350.1;Name=QIE14350.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639209.1;locus_tag=IXO1088_000990;product=polyamine aminopropyltransferase;protein_id=QIE14350.1;transl_table=11 CP040687.1 Genbank gene 196945 198831 . + . ID=gene-IXO1088_000995;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=IXO1088_000995 CP040687.1 Protein Homology CDS 196945 198831 . + 0 ID=cds-QIE14351.1;Parent=gene-IXO1088_000995;Dbxref=NCBI_GP:QIE14351.1;Name=QIE14351.1;gbkey=CDS;gene=speA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639208.2;locus_tag=IXO1088_000995;product=arginine decarboxylase;protein_id=QIE14351.1;transl_table=11 CP040687.1 Genbank pseudogene 199404 200758 . + . ID=gene-IXO1088_001000;Name=IXO1088_001000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001000;pseudo=true CP040687.1 Protein Homology CDS 199404 200758 . + 0 ID=cds-IXO1088_001000;Parent=gene-IXO1088_001000;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1088_001000;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 201163 203886 . + . ID=gene-IXO1088_001005;Name=IXO1088_001005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001005 CP040687.1 Protein Homology CDS 201163 203886 . + 0 ID=cds-QIE14352.1;Parent=gene-IXO1088_001005;Dbxref=NCBI_GP:QIE14352.1;Name=QIE14352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257894.1;locus_tag=IXO1088_001005;product=type VI secretion system tip protein VgrG;protein_id=QIE14352.1;transl_table=11 CP040687.1 Genbank gene 203954 206107 . + . ID=gene-IXO1088_001010;Name=IXO1088_001010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001010 CP040687.1 Protein Homology CDS 203954 206107 . + 0 ID=cds-QIE14353.1;Parent=gene-IXO1088_001010;Dbxref=NCBI_GP:QIE14353.1;Name=QIE14353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407286.1;locus_tag=IXO1088_001010;product=DUF3274 domain-containing protein;protein_id=QIE14353.1;transl_table=11 CP040687.1 Genbank gene 206104 207795 . + . ID=gene-IXO1088_001015;Name=IXO1088_001015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001015 CP040687.1 Protein Homology CDS 206104 207795 . + 0 ID=cds-QIE14354.1;Parent=gene-IXO1088_001015;Dbxref=NCBI_GP:QIE14354.1;Name=QIE14354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257195.1;locus_tag=IXO1088_001015;product=DUF2875 domain-containing protein;protein_id=QIE14354.1;transl_table=11 CP040687.1 Genbank pseudogene 207792 208050 . + . ID=gene-IXO1088_001020;Name=IXO1088_001020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001020;pseudo=true CP040687.1 Protein Homology CDS 207792 208050 . + 0 ID=cds-IXO1088_001020;Parent=gene-IXO1088_001020;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303179.1;locus_tag=IXO1088_001020;product=PAAR domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 208051 208206 . + . ID=gene-IXO1088_001025;Name=IXO1088_001025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001025;pseudo=true CP040687.1 Protein Homology CDS 208051 208206 . + 0 ID=cds-IXO1088_001025;Parent=gene-IXO1088_001025;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258951.1;locus_tag=IXO1088_001025;product=pectate lyase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 208329 210233 . - . ID=gene-IXO1088_001030;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=IXO1088_001030 CP040687.1 Protein Homology CDS 208329 210233 . - 0 ID=cds-QIE14355.1;Parent=gene-IXO1088_001030;Dbxref=NCBI_GP:QIE14355.1;Name=QIE14355.1;gbkey=CDS;gene=mnmG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635772.1;locus_tag=IXO1088_001030;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=QIE14355.1;transl_table=11 CP040687.1 Genbank gene 210494 210673 . - . ID=gene-IXO1088_001035;Name=IXO1088_001035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001035 CP040687.1 Protein Homology CDS 210494 210673 . - 0 ID=cds-QIE14356.1;Parent=gene-IXO1088_001035;Dbxref=NCBI_GP:QIE14356.1;Name=QIE14356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485698.1;locus_tag=IXO1088_001035;product=hypothetical protein;protein_id=QIE14356.1;transl_table=11 CP040687.1 Genbank gene 210807 211274 . - . ID=gene-IXO1088_001040;Name=IXO1088_001040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001040 CP040687.1 Protein Homology CDS 210807 211274 . - 0 ID=cds-QIE14357.1;Parent=gene-IXO1088_001040;Dbxref=NCBI_GP:QIE14357.1;Name=QIE14357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635773.1;locus_tag=IXO1088_001040;product=hypothetical protein;protein_id=QIE14357.1;transl_table=11 CP040687.1 Genbank gene 211432 212391 . + . ID=gene-IXO1088_001045;Name=IXO1088_001045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001045 CP040687.1 Protein Homology CDS 211432 212391 . + 0 ID=cds-QIE14358.1;Parent=gene-IXO1088_001045;Dbxref=NCBI_GP:QIE14358.1;Name=QIE14358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635774.1;locus_tag=IXO1088_001045;product=pyridoxal-phosphate dependent enzyme;protein_id=QIE14358.1;transl_table=11 CP040687.1 Genbank gene 212376 212993 . + . ID=gene-IXO1088_001050;Name=IXO1088_001050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001050 CP040687.1 Protein Homology CDS 212376 212993 . + 0 ID=cds-QIE14359.1;Parent=gene-IXO1088_001050;Dbxref=NCBI_GP:QIE14359.1;Name=QIE14359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912742.1;locus_tag=IXO1088_001050;product=YdcF family protein;protein_id=QIE14359.1;transl_table=11 CP040687.1 Genbank gene 213036 213455 . + . ID=gene-IXO1088_001055;Name=IXO1088_001055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001055 CP040687.1 Protein Homology CDS 213036 213455 . + 0 ID=cds-QIE14360.1;Parent=gene-IXO1088_001055;Dbxref=NCBI_GP:QIE14360.1;Name=QIE14360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635776.1;locus_tag=IXO1088_001055;product=isopropylmalate/homocitrate/citramalate synthase;protein_id=QIE14360.1;transl_table=11 CP040687.1 Genbank gene 213708 214613 . - . ID=gene-IXO1088_001060;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=IXO1088_001060 CP040687.1 Protein Homology CDS 213708 214613 . - 0 ID=cds-QIE14361.1;Parent=gene-IXO1088_001060;Dbxref=NCBI_GP:QIE14361.1;Name=QIE14361.1;gbkey=CDS;gene=lpxO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635777.1;locus_tag=IXO1088_001060;product=lipid A hydroxylase LpxO;protein_id=QIE14361.1;transl_table=11 CP040687.1 Genbank gene 214862 215746 . - . ID=gene-IXO1088_001065;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=IXO1088_001065 CP040687.1 Protein Homology CDS 214862 215746 . - 0 ID=cds-QIE14362.1;Parent=gene-IXO1088_001065;Dbxref=NCBI_GP:QIE14362.1;Name=QIE14362.1;gbkey=CDS;gene=bioC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635778.1;locus_tag=IXO1088_001065;product=malonyl-ACP O-methyltransferase BioC;protein_id=QIE14362.1;transl_table=11 CP040687.1 Genbank gene 215810 216592 . - . ID=gene-IXO1088_001070;Name=IXO1088_001070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001070 CP040687.1 Protein Homology CDS 215810 216592 . - 0 ID=cds-QIE14363.1;Parent=gene-IXO1088_001070;Dbxref=NCBI_GP:QIE14363.1;Name=QIE14363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509285.1;locus_tag=IXO1088_001070;product=SDR family oxidoreductase;protein_id=QIE14363.1;transl_table=11 CP040687.1 Genbank gene 216637 217398 . - . ID=gene-IXO1088_001075;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=IXO1088_001075 CP040687.1 Protein Homology CDS 216637 217398 . - 0 ID=cds-QIE14364.1;Parent=gene-IXO1088_001075;Dbxref=NCBI_GP:QIE14364.1;Name=QIE14364.1;gbkey=CDS;gene=bioH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968482.1;locus_tag=IXO1088_001075;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=QIE14364.1;transl_table=11 CP040687.1 Genbank gene 217562 217891 . - . ID=gene-IXO1088_001080;Name=IXO1088_001080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001080 CP040687.1 Protein Homology CDS 217562 217891 . - 0 ID=cds-QIE14365.1;Parent=gene-IXO1088_001080;Dbxref=NCBI_GP:QIE14365.1;Name=QIE14365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257206.1;locus_tag=IXO1088_001080;product=hypothetical protein;protein_id=QIE14365.1;transl_table=11 CP040687.1 Genbank pseudogene 217933 218133 . + . ID=gene-IXO1088_001085;Name=IXO1088_001085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001085;pseudo=true CP040687.1 Protein Homology CDS 217933 218133 . + 0 ID=cds-IXO1088_001085;Parent=gene-IXO1088_001085;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612184.1;locus_tag=IXO1088_001085;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 218210 219301 . + . ID=gene-IXO1088_001090;Name=IXO1088_001090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001090 CP040687.1 Protein Homology CDS 218210 219301 . + 0 ID=cds-QIE17819.1;Parent=gene-IXO1088_001090;Dbxref=NCBI_GP:QIE17819.1;Name=QIE17819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112451.1;locus_tag=IXO1088_001090;product=DUF4380 domain-containing protein;protein_id=QIE17819.1;transl_table=11 CP040687.1 Genbank gene 219370 220968 . + . ID=gene-IXO1088_001095;Name=IXO1088_001095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001095 CP040687.1 Protein Homology CDS 219370 220968 . + 0 ID=cds-QIE14366.1;Parent=gene-IXO1088_001095;Dbxref=NCBI_GP:QIE14366.1;Name=QIE14366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407294.1;locus_tag=IXO1088_001095;product=glucan biosynthesis protein D;protein_id=QIE14366.1;transl_table=11 CP040687.1 Genbank gene 221133 222377 . - . ID=gene-IXO1088_001100;Name=IXO1088_001100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001100 CP040687.1 Protein Homology CDS 221133 222377 . - 0 ID=cds-QIE14367.1;Parent=gene-IXO1088_001100;Dbxref=NCBI_GP:QIE14367.1;Name=QIE14367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155166.1;locus_tag=IXO1088_001100;product=GAF domain-containing sensor histidine kinase;protein_id=QIE14367.1;transl_table=11 CP040687.1 Genbank gene 222829 223458 . - . ID=gene-IXO1088_001105;Name=IXO1088_001105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001105 CP040687.1 Protein Homology CDS 222829 223458 . - 0 ID=cds-QIE14368.1;Parent=gene-IXO1088_001105;Dbxref=NCBI_GP:QIE14368.1;Name=QIE14368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639482.1;locus_tag=IXO1088_001105;product=thymidine kinase;protein_id=QIE14368.1;transl_table=11 CP040687.1 Genbank gene 223665 225641 . + . ID=gene-IXO1088_001110;Name=IXO1088_001110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001110 CP040687.1 Protein Homology CDS 223665 225641 . + 0 ID=cds-QIE14369.1;Parent=gene-IXO1088_001110;Dbxref=NCBI_GP:QIE14369.1;Name=QIE14369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639478.1;locus_tag=IXO1088_001110;product=ATP-dependent DNA helicase Rep;protein_id=QIE14369.1;transl_table=11 CP040687.1 Genbank pseudogene 225719 226020 . + . ID=gene-IXO1088_001115;Name=IXO1088_001115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001115;pseudo=true CP040687.1 Protein Homology CDS 225719 226020 . + 0 ID=cds-IXO1088_001115;Parent=gene-IXO1088_001115;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374593.1;locus_tag=IXO1088_001115;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 226141 226740 . + . ID=gene-IXO1088_001120;Name=IXO1088_001120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001120;pseudo=true CP040687.1 Protein Homology CDS 226141 226740 . + 0 ID=cds-IXO1088_001120;Parent=gene-IXO1088_001120;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509575.1;locus_tag=IXO1088_001120;product=DUF4272 domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 227028 227693 . - . ID=gene-IXO1088_001125;Name=IXO1088_001125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001125 CP040687.1 Protein Homology CDS 227028 227693 . - 0 ID=cds-QIE14370.1;Parent=gene-IXO1088_001125;Dbxref=NCBI_GP:QIE14370.1;Name=QIE14370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639475.1;locus_tag=IXO1088_001125;product=DUF480 domain-containing protein;protein_id=QIE14370.1;transl_table=11 CP040687.1 Genbank gene 227966 228976 . + . ID=gene-IXO1088_001130;Name=IXO1088_001130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001130 CP040687.1 Protein Homology CDS 227966 228976 . + 0 ID=cds-QIE14371.1;Parent=gene-IXO1088_001130;Dbxref=NCBI_GP:QIE14371.1;Name=QIE14371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300474.1;locus_tag=IXO1088_001130;product=5'-nucleotidase%2C lipoprotein e(P4) family;protein_id=QIE14371.1;transl_table=11 CP040687.1 Genbank gene 228973 229704 . + . ID=gene-IXO1088_001135;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=IXO1088_001135 CP040687.1 Protein Homology CDS 228973 229704 . + 0 ID=cds-QIE14372.1;Parent=gene-IXO1088_001135;Dbxref=NCBI_GP:QIE14372.1;Name=QIE14372.1;gbkey=CDS;gene=pyrF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505335.1;locus_tag=IXO1088_001135;product=orotidine-5'-phosphate decarboxylase;protein_id=QIE14372.1;transl_table=11 CP040687.1 Genbank gene 230058 231587 . - . ID=gene-IXO1088_001140;Name=IXO1088_001140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001140 CP040687.1 Protein Homology CDS 230058 231587 . - 0 ID=cds-QIE14373.1;Parent=gene-IXO1088_001140;Dbxref=NCBI_GP:QIE14373.1;Name=QIE14373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443718.1;locus_tag=IXO1088_001140;product=tryptophan 7-halogenase;protein_id=QIE14373.1;transl_table=11 CP040687.1 Genbank gene 231697 234729 . - . ID=gene-IXO1088_001145;Name=IXO1088_001145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001145 CP040687.1 Protein Homology CDS 231697 234729 . - 0 ID=cds-QIE14374.1;Parent=gene-IXO1088_001145;Dbxref=NCBI_GP:QIE14374.1;Name=QIE14374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639471.1;locus_tag=IXO1088_001145;product=hypothetical protein;protein_id=QIE14374.1;transl_table=11 CP040687.1 Genbank gene 235028 238066 . - . ID=gene-IXO1088_001150;Name=IXO1088_001150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001150 CP040687.1 Protein Homology CDS 235028 238066 . - 0 ID=cds-QIE14375.1;Parent=gene-IXO1088_001150;Dbxref=NCBI_GP:QIE14375.1;Name=QIE14375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639470.1;locus_tag=IXO1088_001150;product=TonB-dependent receptor;protein_id=QIE14375.1;transl_table=11 CP040687.1 Genbank gene 238231 239283 . - . ID=gene-IXO1088_001155;Name=IXO1088_001155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001155 CP040687.1 Protein Homology CDS 238231 239283 . - 0 ID=cds-QIE14376.1;Parent=gene-IXO1088_001155;Dbxref=NCBI_GP:QIE14376.1;Name=QIE14376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505331.1;locus_tag=IXO1088_001155;product=LacI family transcriptional regulator;protein_id=QIE14376.1;transl_table=11 CP040687.1 Genbank gene 239452 239697 . - . ID=gene-IXO1088_001160;Name=IXO1088_001160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001160 CP040687.1 Protein Homology CDS 239452 239697 . - 0 ID=cds-QIE14377.1;Parent=gene-IXO1088_001160;Dbxref=NCBI_GP:QIE14377.1;Name=QIE14377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374574.1;locus_tag=IXO1088_001160;product=hypothetical protein;protein_id=QIE14377.1;transl_table=11 CP040687.1 Genbank pseudogene 239696 240646 . + . ID=gene-IXO1088_001165;Name=IXO1088_001165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001165;pseudo=true CP040687.1 Protein Homology CDS 239696 240646 . + 0 ID=cds-IXO1088_001165;Parent=gene-IXO1088_001165;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116113.1;locus_tag=IXO1088_001165;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 240688 243204 . + . ID=gene-IXO1088_001170;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=pseudogene;locus_tag=IXO1088_001170;pseudo=true CP040687.1 Protein Homology CDS 240688 243204 . + 0 ID=cds-IXO1088_001170;Parent=gene-IXO1088_001170;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;gene=plsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639467.1;locus_tag=IXO1088_001170;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 243404 244384 . + . ID=gene-IXO1088_001175;Name=IXO1088_001175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001175;pseudo=true CP040687.1 Protein Homology CDS 243404 244384 . + 0 ID=cds-IXO1088_001175;Parent=gene-IXO1088_001175;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005932469.1;locus_tag=IXO1088_001175;product=zinc-binding dehydrogenase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 245023 245241 . - . ID=gene-IXO1088_001180;Name=IXO1088_001180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001180 CP040687.1 Protein Homology CDS 245023 245241 . - 0 ID=cds-QIE14378.1;Parent=gene-IXO1088_001180;Dbxref=NCBI_GP:QIE14378.1;Name=QIE14378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639465.1;locus_tag=IXO1088_001180;product=DUF465 domain-containing protein;protein_id=QIE14378.1;transl_table=11 CP040687.1 Genbank pseudogene 245379 245693 . + . ID=gene-IXO1088_001185;Name=IXO1088_001185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001185;pseudo=true CP040687.1 Protein Homology CDS 245379 245693 . + 0 ID=cds-IXO1088_001185;Parent=gene-IXO1088_001185;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573822.1;locus_tag=IXO1088_001185;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 245760 246862 . + . ID=gene-IXO1088_001190;Name=IXO1088_001190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001190 CP040687.1 Protein Homology CDS 245760 246015 . + 0 ID=cds-QIE14379.1;Parent=gene-IXO1088_001190;Dbxref=NCBI_GP:QIE14379.1;Name=QIE14379.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=IXO1088_001190;product=IS3 family transposase;protein_id=QIE14379.1;transl_table=11 CP040687.1 Protein Homology CDS 246015 246862 . + 2 ID=cds-QIE14379.1;Parent=gene-IXO1088_001190;Dbxref=NCBI_GP:QIE14379.1;Name=QIE14379.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=IXO1088_001190;product=IS3 family transposase;protein_id=QIE14379.1;transl_table=11 CP040687.1 Genbank pseudogene 247193 247833 . + . ID=gene-IXO1088_001195;Name=IXO1088_001195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001195;pseudo=true CP040687.1 Protein Homology CDS 247193 247833 . + 0 ID=cds-IXO1088_001195;Parent=gene-IXO1088_001195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379957.1;locus_tag=IXO1088_001195;product=type III secretion system effector protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 248185 249561 . + . ID=gene-IXO1088_001200;Name=IXO1088_001200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001200;pseudo=true CP040687.1 Protein Homology CDS 248185 249561 . + 0 ID=cds-IXO1088_001200;Parent=gene-IXO1088_001200;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041183487.1;locus_tag=IXO1088_001200;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 249585 250550 . - . ID=gene-IXO1088_001205;Name=IXO1088_001205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001205 CP040687.1 Protein Homology CDS 249585 250550 . - 0 ID=cds-QIE14380.1;Parent=gene-IXO1088_001205;Dbxref=NCBI_GP:QIE14380.1;Name=QIE14380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_001205;product=IS1595-like element ISXo5 family transposase;protein_id=QIE14380.1;transl_table=11 CP040687.1 Genbank gene 251229 252266 . - . ID=gene-IXO1088_001210;Name=IXO1088_001210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001210 CP040687.1 Protein Homology CDS 251229 252266 . - 0 ID=cds-QIE14381.1;Parent=gene-IXO1088_001210;Dbxref=NCBI_GP:QIE14381.1;Name=QIE14381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409779.1;locus_tag=IXO1088_001210;product=patatin-like phospholipase family protein;protein_id=QIE14381.1;transl_table=11 CP040687.1 Genbank gene 252774 253784 . - . ID=gene-IXO1088_001215;Name=IXO1088_001215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001215 CP040687.1 Protein Homology CDS 252774 253784 . - 0 ID=cds-QIE14382.1;Parent=gene-IXO1088_001215;Dbxref=NCBI_GP:QIE14382.1;Name=QIE14382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635555.2;locus_tag=IXO1088_001215;product=TIGR00266 family protein;protein_id=QIE14382.1;transl_table=11 CP040687.1 Genbank gene 253973 254818 . - . ID=gene-IXO1088_001220;Name=IXO1088_001220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001220 CP040687.1 Protein Homology CDS 253973 254818 . - 0 ID=cds-QIE14383.1;Parent=gene-IXO1088_001220;Dbxref=NCBI_GP:QIE14383.1;Name=QIE14383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159607.1;locus_tag=IXO1088_001220;product=ATP-binding cassette domain-containing protein;protein_id=QIE14383.1;transl_table=11 CP040687.1 Genbank gene 254978 256183 . + . ID=gene-IXO1088_001225;Name=IXO1088_001225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001225 CP040687.1 Protein Homology CDS 254978 256183 . + 0 ID=cds-QIE14384.1;Parent=gene-IXO1088_001225;Dbxref=NCBI_GP:QIE14384.1;Name=QIE14384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379811.1;locus_tag=IXO1088_001225;product=acyl-CoA desaturase;protein_id=QIE14384.1;transl_table=11 CP040687.1 Genbank gene 256236 256568 . + . ID=gene-IXO1088_001230;Name=IXO1088_001230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001230 CP040687.1 Protein Homology CDS 256236 256568 . + 0 ID=cds-QIE17820.1;Parent=gene-IXO1088_001230;Dbxref=NCBI_GP:QIE17820.1;Name=QIE17820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453189.1;locus_tag=IXO1088_001230;product=calcium-dependent protein kinase 21;protein_id=QIE17820.1;transl_table=11 CP040687.1 Genbank gene 256617 257354 . + . ID=gene-IXO1088_001235;Name=IXO1088_001235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001235 CP040687.1 Protein Homology CDS 256617 257354 . + 0 ID=cds-QIE14385.1;Parent=gene-IXO1088_001235;Dbxref=NCBI_GP:QIE14385.1;Name=QIE14385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635559.1;locus_tag=IXO1088_001235;product=ATP-binding cassette domain-containing protein;protein_id=QIE14385.1;transl_table=11 CP040687.1 Genbank gene 257351 258823 . + . ID=gene-IXO1088_001240;Name=IXO1088_001240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001240 CP040687.1 Protein Homology CDS 257351 258823 . + 0 ID=cds-QIE14386.1;Parent=gene-IXO1088_001240;Dbxref=NCBI_GP:QIE14386.1;Name=QIE14386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370723.1;locus_tag=IXO1088_001240;product=ABC transporter permease subunit;protein_id=QIE14386.1;transl_table=11 CP040687.1 Genbank gene 259110 260291 . - . ID=gene-IXO1088_001245;Name=IXO1088_001245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001245 CP040687.1 Protein Homology CDS 259110 260291 . - 0 ID=cds-QIE14387.1;Parent=gene-IXO1088_001245;Dbxref=NCBI_GP:QIE14387.1;Name=QIE14387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501482.1;locus_tag=IXO1088_001245;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=QIE14387.1;transl_table=11 CP040687.1 Genbank gene 260363 261646 . + . ID=gene-IXO1088_001250;Name=IXO1088_001250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001250 CP040687.1 Protein Homology CDS 260363 261646 . + 0 ID=cds-QIE14388.1;Parent=gene-IXO1088_001250;Dbxref=NCBI_GP:QIE14388.1;Name=QIE14388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050153.1;locus_tag=IXO1088_001250;product=ergothioneine biosynthesis protein EgtB;protein_id=QIE14388.1;transl_table=11 CP040687.1 Genbank gene 261643 262629 . + . ID=gene-IXO1088_001255;Name=egtD;gbkey=Gene;gene=egtD;gene_biotype=protein_coding;locus_tag=IXO1088_001255 CP040687.1 Protein Homology CDS 261643 262629 . + 0 ID=cds-QIE14389.1;Parent=gene-IXO1088_001255;Dbxref=NCBI_GP:QIE14389.1;Name=QIE14389.1;gbkey=CDS;gene=egtD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635563.1;locus_tag=IXO1088_001255;product=L-histidine N(alpha)-methyltransferase;protein_id=QIE14389.1;transl_table=11 CP040687.1 Genbank gene 262674 263951 . - . ID=gene-IXO1088_001260;Name=IXO1088_001260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001260 CP040687.1 Protein Homology CDS 262674 263951 . - 0 ID=cds-QIE14390.1;Parent=gene-IXO1088_001260;Dbxref=NCBI_GP:QIE14390.1;Name=QIE14390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501485.1;locus_tag=IXO1088_001260;product=type II toxin-antitoxin system HipA family toxin;protein_id=QIE14390.1;transl_table=11 CP040687.1 Genbank gene 263948 264568 . - . ID=gene-IXO1088_001265;Name=IXO1088_001265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001265 CP040687.1 Protein Homology CDS 263948 264568 . - 0 ID=cds-QIE14391.1;Parent=gene-IXO1088_001265;Dbxref=NCBI_GP:QIE14391.1;Name=QIE14391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260780.1;locus_tag=IXO1088_001265;product=helix-turn-helix transcriptional regulator;protein_id=QIE14391.1;transl_table=11 CP040687.1 Genbank gene 264711 268418 . - . ID=gene-IXO1088_001270;Name=IXO1088_001270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001270 CP040687.1 Protein Homology CDS 264711 268418 . - 0 ID=cds-QIE14392.1;Parent=gene-IXO1088_001270;Dbxref=NCBI_GP:QIE14392.1;Name=QIE14392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635565.2;locus_tag=IXO1088_001270;product=indolepyruvate ferredoxin oxidoreductase family protein;protein_id=QIE14392.1;transl_table=11 CP040687.1 Genbank gene 268613 268975 . + . ID=gene-IXO1088_001275;Name=IXO1088_001275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001275 CP040687.1 Protein Homology CDS 268613 268975 . + 0 ID=cds-QIE14393.1;Parent=gene-IXO1088_001275;Dbxref=NCBI_GP:QIE14393.1;Name=QIE14393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409769.1;locus_tag=IXO1088_001275;product=hypothetical protein;protein_id=QIE14393.1;transl_table=11 CP040687.1 Genbank gene 269510 270427 . + . ID=gene-IXO1088_001280;Name=IXO1088_001280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001280 CP040687.1 Protein Homology CDS 269510 270427 . + 0 ID=cds-QIE14394.1;Parent=gene-IXO1088_001280;Dbxref=NCBI_GP:QIE14394.1;Name=QIE14394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635567.1;locus_tag=IXO1088_001280;product=AEC family transporter;protein_id=QIE14394.1;transl_table=11 CP040687.1 Genbank gene 270780 271412 . + . ID=gene-IXO1088_001285;Name=IXO1088_001285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001285 CP040687.1 Protein Homology CDS 270780 271412 . + 0 ID=cds-QIE14395.1;Parent=gene-IXO1088_001285;Dbxref=NCBI_GP:QIE14395.1;Name=QIE14395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635569.1;locus_tag=IXO1088_001285;product=ParA family protein;protein_id=QIE14395.1;transl_table=11 CP040687.1 Genbank gene 271428 271904 . + . ID=gene-IXO1088_001290;Name=IXO1088_001290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001290 CP040687.1 Protein Homology CDS 271428 271904 . + 0 ID=cds-QIE14396.1;Parent=gene-IXO1088_001290;Dbxref=NCBI_GP:QIE14396.1;Name=QIE14396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635570.1;locus_tag=IXO1088_001290;product=histidine phosphatase family protein;protein_id=QIE14396.1;transl_table=11 CP040687.1 Genbank gene 271908 272480 . + . ID=gene-IXO1088_001295;Name=IXO1088_001295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001295 CP040687.1 Protein Homology CDS 271908 272480 . + 0 ID=cds-QIE14397.1;Parent=gene-IXO1088_001295;Dbxref=NCBI_GP:QIE14397.1;Name=QIE14397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635571.1;locus_tag=IXO1088_001295;product=polyisoprenoid-binding protein;protein_id=QIE14397.1;transl_table=11 CP040687.1 Genbank gene 272477 274492 . + . ID=gene-IXO1088_001300;Name=IXO1088_001300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001300 CP040687.1 Protein Homology CDS 272477 274492 . + 0 ID=cds-QIE14398.1;Parent=gene-IXO1088_001300;Dbxref=NCBI_GP:QIE14398.1;Name=QIE14398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921165.1;locus_tag=IXO1088_001300;product=phospholipase D family protein;protein_id=QIE14398.1;transl_table=11 CP040687.1 Genbank gene 274791 275219 . + . ID=gene-IXO1088_001305;Name=IXO1088_001305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001305 CP040687.1 Protein Homology CDS 274791 275219 . + 0 ID=cds-QIE17821.1;Parent=gene-IXO1088_001305;Dbxref=NCBI_GP:QIE17821.1;Name=QIE17821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157352.1;locus_tag=IXO1088_001305;product=hotdog fold thioesterase;protein_id=QIE17821.1;transl_table=11 CP040687.1 Genbank gene 275339 276142 . + . ID=gene-IXO1088_001310;Name=IXO1088_001310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001310 CP040687.1 Protein Homology CDS 275339 276142 . + 0 ID=cds-QIE14399.1;Parent=gene-IXO1088_001310;Dbxref=NCBI_GP:QIE14399.1;Name=QIE14399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635574.1;locus_tag=IXO1088_001310;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=QIE14399.1;transl_table=11 CP040687.1 Genbank gene 276202 277191 . + . ID=gene-IXO1088_001315;Name=IXO1088_001315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001315 CP040687.1 Protein Homology CDS 276202 277191 . + 0 ID=cds-QIE14400.1;Parent=gene-IXO1088_001315;Dbxref=NCBI_GP:QIE14400.1;Name=QIE14400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300655.1;locus_tag=IXO1088_001315;product=alpha/beta fold hydrolase;protein_id=QIE14400.1;transl_table=11 CP040687.1 Genbank pseudogene 277212 277476 . + . ID=gene-IXO1088_001320;Name=IXO1088_001320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001320;pseudo=true CP040687.1 Protein Homology CDS 277212 277476 . + 0 ID=cds-IXO1088_001320;Parent=gene-IXO1088_001320;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117879.1;locus_tag=IXO1088_001320;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 277605 279677 . + . ID=gene-IXO1088_001325;Name=IXO1088_001325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001325 CP040687.1 Protein Homology CDS 277605 279677 . + 0 ID=cds-QIE14401.1;Parent=gene-IXO1088_001325;Dbxref=NCBI_GP:QIE14401.1;Name=QIE14401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635576.1;locus_tag=IXO1088_001325;product=tetratricopeptide repeat protein;protein_id=QIE14401.1;transl_table=11 CP040687.1 Genbank gene 279872 280483 . + . ID=gene-IXO1088_001330;Name=IXO1088_001330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001330 CP040687.1 Protein Homology CDS 279872 280483 . + 0 ID=cds-QIE14402.1;Parent=gene-IXO1088_001330;Dbxref=NCBI_GP:QIE14402.1;Name=QIE14402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635577.1;locus_tag=IXO1088_001330;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=QIE14402.1;transl_table=11 CP040687.1 Genbank pseudogene 280567 281572 . + . ID=gene-IXO1088_001335;Name=IXO1088_001335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001335;pseudo=true CP040687.1 Protein Homology CDS 280567 281572 . + 0 ID=cds-IXO1088_001335;Parent=gene-IXO1088_001335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157348.1;locus_tag=IXO1088_001335;product=NAD(P)-dependent alcohol dehydrogenase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 281637 282443 . - . ID=gene-IXO1088_001340;Name=IXO1088_001340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001340 CP040687.1 Protein Homology CDS 281637 282443 . - 0 ID=cds-QIE14403.1;Parent=gene-IXO1088_001340;Dbxref=NCBI_GP:QIE14403.1;Name=QIE14403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370653.1;locus_tag=IXO1088_001340;product=META domain-containing protein;protein_id=QIE14403.1;transl_table=11 CP040687.1 Genbank gene 282580 283377 . - . ID=gene-IXO1088_001345;Name=IXO1088_001345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001345 CP040687.1 Protein Homology CDS 282580 283377 . - 0 ID=cds-QIE14404.1;Parent=gene-IXO1088_001345;Dbxref=NCBI_GP:QIE14404.1;Name=QIE14404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300661.1;locus_tag=IXO1088_001345;product=undecaprenyl-diphosphate phosphatase;protein_id=QIE14404.1;transl_table=11 CP040687.1 Genbank gene 283599 285008 . + . ID=gene-IXO1088_001350;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=IXO1088_001350 CP040687.1 Protein Homology CDS 283599 285008 . + 0 ID=cds-QIE14405.1;Parent=gene-IXO1088_001350;Dbxref=NCBI_GP:QIE14405.1;Name=QIE14405.1;gbkey=CDS;gene=glnA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157345.1;locus_tag=IXO1088_001350;product=type I glutamate--ammonia ligase;protein_id=QIE14405.1;transl_table=11 CP040687.1 Genbank gene 285285 285623 . + . ID=gene-IXO1088_001355;Name=IXO1088_001355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001355 CP040687.1 Protein Homology CDS 285285 285623 . + 0 ID=cds-QIE17822.1;Parent=gene-IXO1088_001355;Dbxref=NCBI_GP:QIE17822.1;Name=QIE17822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019184907.1;locus_tag=IXO1088_001355;product=P-II family nitrogen regulator;protein_id=QIE17822.1;transl_table=11 CP040687.1 Genbank gene 285613 287088 . + . ID=gene-IXO1088_001360;Name=IXO1088_001360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001360 CP040687.1 Protein Homology CDS 285613 287088 . + 0 ID=cds-QIE14406.1;Parent=gene-IXO1088_001360;Dbxref=NCBI_GP:QIE14406.1;Name=QIE14406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635582.1;locus_tag=IXO1088_001360;product=ammonium transporter;protein_id=QIE14406.1;transl_table=11 CP040687.1 Genbank gene 287359 288414 . + . ID=gene-IXO1088_001365;Name=IXO1088_001365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001365 CP040687.1 Protein Homology CDS 287359 288414 . + 0 ID=cds-QIE14407.1;Parent=gene-IXO1088_001365;Dbxref=NCBI_GP:QIE14407.1;Name=QIE14407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449208.1;locus_tag=IXO1088_001365;product=two-component sensor histidine kinase;protein_id=QIE14407.1;transl_table=11 CP040687.1 Genbank gene 288407 289834 . + . ID=gene-IXO1088_001370;Name=ntrC;gbkey=Gene;gene=ntrC;gene_biotype=protein_coding;locus_tag=IXO1088_001370 CP040687.1 Protein Homology CDS 288407 289834 . + 0 ID=cds-QIE14408.1;Parent=gene-IXO1088_001370;Dbxref=NCBI_GP:QIE14408.1;Name=QIE14408.1;gbkey=CDS;gene=ntrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635584.1;locus_tag=IXO1088_001370;product=nitrogen regulation protein NR(I);protein_id=QIE14408.1;transl_table=11 CP040687.1 Genbank gene 290456 290935 . + . ID=gene-IXO1088_001375;Name=IXO1088_001375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001375 CP040687.1 Protein Homology CDS 290456 290935 . + 0 ID=cds-QIE17823.1;Parent=gene-IXO1088_001375;Dbxref=NCBI_GP:QIE17823.1;Name=QIE17823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635585.1;locus_tag=IXO1088_001375;product=superoxide dismutase family protein;protein_id=QIE17823.1;transl_table=11 CP040687.1 Genbank gene 291006 291638 . + . ID=gene-IXO1088_001380;Name=IXO1088_001380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001380 CP040687.1 Protein Homology CDS 291006 291638 . + 0 ID=cds-QIE17824.1;Parent=gene-IXO1088_001380;Dbxref=NCBI_GP:QIE17824.1;Name=QIE17824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903406.1;locus_tag=IXO1088_001380;product=superoxide dismutase family protein;protein_id=QIE17824.1;transl_table=11 CP040687.1 Genbank pseudogene 291633 291914 . - . ID=gene-IXO1088_001385;Name=IXO1088_001385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001385;pseudo=true CP040687.1 Protein Homology CDS 291633 291914 . - 0 ID=cds-IXO1088_001385;Parent=gene-IXO1088_001385;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260659.1;locus_tag=IXO1088_001385;product=IS630 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 291921 292886 . - . ID=gene-IXO1088_001390;Name=IXO1088_001390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001390 CP040687.1 Protein Homology CDS 291921 292886 . - 0 ID=cds-QIE14409.1;Parent=gene-IXO1088_001390;Dbxref=NCBI_GP:QIE14409.1;Name=QIE14409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_001390;product=IS1595-like element ISXo5 family transposase;protein_id=QIE14409.1;transl_table=11 CP040687.1 Genbank gene 292974 293510 . - . ID=gene-IXO1088_001395;Name=IXO1088_001395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001395 CP040687.1 Protein Homology CDS 292974 293510 . - 0 ID=cds-QIE14410.1;Parent=gene-IXO1088_001395;Dbxref=NCBI_GP:QIE14410.1;Name=QIE14410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260755.1;locus_tag=IXO1088_001395;product=phage tail protein;protein_id=QIE14410.1;transl_table=11 CP040687.1 Genbank gene 293569 294096 . - . ID=gene-IXO1088_001400;Name=IXO1088_001400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001400 CP040687.1 Protein Homology CDS 293569 294096 . - 0 ID=cds-QIE14411.1;Parent=gene-IXO1088_001400;Dbxref=NCBI_GP:QIE14411.1;Name=QIE14411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010341084.1;locus_tag=IXO1088_001400;product=phage tail protein;protein_id=QIE14411.1;transl_table=11 CP040687.1 Genbank gene 294165 294710 . - . ID=gene-IXO1088_001405;Name=IXO1088_001405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001405 CP040687.1 Protein Homology CDS 294165 294710 . - 0 ID=cds-QIE14412.1;Parent=gene-IXO1088_001405;Dbxref=NCBI_GP:QIE14412.1;Name=QIE14412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409756.1;locus_tag=IXO1088_001405;product=phage tail protein;protein_id=QIE14412.1;transl_table=11 CP040687.1 Genbank pseudogene 294966 299069 . + . ID=gene-IXO1088_001410;Name=IXO1088_001410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001410;pseudo=true CP040687.1 Protein Homology CDS 294966 299069 . + 0 ID=cds-IXO1088_001410;Parent=gene-IXO1088_001410;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364927.1;locus_tag=IXO1088_001410;product=autotransporter domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 299486 301000 . - . ID=gene-IXO1088_001415;Name=IXO1088_001415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001415;pseudo=true CP040687.1 Protein Homology CDS 299486 301000 . - 0 ID=cds-IXO1088_001415;Parent=gene-IXO1088_001415;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443749.1;locus_tag=IXO1088_001415;product=ATPase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 301065 302300 . + . ID=gene-IXO1088_001420;Name=IXO1088_001420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001420 CP040687.1 Protein Homology CDS 301065 302300 . + 0 ID=cds-QIE14413.1;Parent=gene-IXO1088_001420;Dbxref=NCBI_GP:QIE14413.1;Name=QIE14413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1088_001420;product=ISL3 family transposase;protein_id=QIE14413.1;transl_table=11 CP040687.1 Genbank pseudogene 302312 302635 . - . ID=gene-IXO1088_001425;Name=IXO1088_001425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001425;pseudo=true CP040687.1 Protein Homology CDS 302312 302635 . - 0 ID=cds-IXO1088_001425;Parent=gene-IXO1088_001425;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443749.1;locus_tag=IXO1088_001425;product=ATPase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 302631 302717 . - . ID=gene-IXO1088_001430;Name=IXO1088_001430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001430;pseudo=true CP040687.1 Protein Homology CDS 302631 302717 . - 0 ID=cds-IXO1088_001430;Parent=gene-IXO1088_001430;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257538.1;locus_tag=IXO1088_001430;product=alcohol dehydrogenase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 302754 303968 . + . ID=gene-IXO1088_001435;Name=IXO1088_001435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001435 CP040687.1 Protein Homology CDS 302754 303968 . + 0 ID=cds-QIE14414.1;Parent=gene-IXO1088_001435;Dbxref=NCBI_GP:QIE14414.1;Name=QIE14414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1088_001435;product=IS4-like element ISXo14 family transposase;protein_id=QIE14414.1;transl_table=11 CP040687.1 Genbank pseudogene 303987 304820 . - . ID=gene-IXO1088_001440;Name=IXO1088_001440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001440;pseudo=true CP040687.1 Protein Homology CDS 303987 304820 . - 0 ID=cds-IXO1088_001440;Parent=gene-IXO1088_001440;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443749.1;locus_tag=IXO1088_001440;product=ATPase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 304888 305190 . - . ID=gene-IXO1088_001445;Name=IXO1088_001445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001445 CP040687.1 GeneMarkS-2+ CDS 304888 305190 . - 0 ID=cds-QIE14415.1;Parent=gene-IXO1088_001445;Dbxref=NCBI_GP:QIE14415.1;Name=QIE14415.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_001445;product=hypothetical protein;protein_id=QIE14415.1;transl_table=11 CP040687.1 Genbank gene 305226 308639 . + . ID=gene-IXO1088_001450;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=IXO1088_001450 CP040687.1 Protein Homology CDS 305226 308639 . + 0 ID=cds-QIE14416.1;Parent=gene-IXO1088_001450;Dbxref=NCBI_GP:QIE14416.1;Name=QIE14416.1;gbkey=CDS;gene=recC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017164976.1;locus_tag=IXO1088_001450;product=exodeoxyribonuclease V subunit gamma;protein_id=QIE14416.1;transl_table=11 CP040687.1 Genbank gene 308636 312709 . + . ID=gene-IXO1088_001455;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=IXO1088_001455 CP040687.1 Protein Homology CDS 308636 312709 . + 0 ID=cds-QIE14417.1;Parent=gene-IXO1088_001455;Dbxref=NCBI_GP:QIE14417.1;Name=QIE14417.1;gbkey=CDS;gene=recB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171629.1;locus_tag=IXO1088_001455;product=exodeoxyribonuclease V subunit beta;protein_id=QIE14417.1;transl_table=11 CP040687.1 Genbank gene 312897 315149 . + . ID=gene-IXO1088_001460;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=IXO1088_001460 CP040687.1 Protein Homology CDS 312897 315149 . + 0 ID=cds-QIE14418.1;Parent=gene-IXO1088_001460;Dbxref=NCBI_GP:QIE14418.1;Name=QIE14418.1;gbkey=CDS;gene=recD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639532.1;locus_tag=IXO1088_001460;product=exodeoxyribonuclease V subunit alpha;protein_id=QIE14418.1;transl_table=11 CP040687.1 Genbank gene 315244 315525 . + . ID=gene-IXO1088_001465;Name=IXO1088_001465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001465 CP040687.1 Protein Homology CDS 315244 315525 . + 0 ID=cds-QIE14419.1;Parent=gene-IXO1088_001465;Dbxref=NCBI_GP:QIE14419.1;Name=QIE14419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902142.1;locus_tag=IXO1088_001465;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=QIE14419.1;transl_table=11 CP040687.1 Genbank gene 315543 315833 . + . ID=gene-IXO1088_001470;Name=IXO1088_001470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001470 CP040687.1 Protein Homology CDS 315543 315833 . + 0 ID=cds-QIE14420.1;Parent=gene-IXO1088_001470;Dbxref=NCBI_GP:QIE14420.1;Name=QIE14420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639531.1;locus_tag=IXO1088_001470;product=HigA family addiction module antidote protein;protein_id=QIE14420.1;transl_table=11 CP040687.1 Genbank pseudogene 316124 316485 . + . ID=gene-IXO1088_001475;Name=IXO1088_001475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001475;pseudo=true CP040687.1 Protein Homology CDS 316124 316485 . + 0 ID=cds-IXO1088_001475;Parent=gene-IXO1088_001475;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302540.1;locus_tag=IXO1088_001475;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 316762 318156 . + . ID=gene-IXO1088_001480;Name=IXO1088_001480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001480 CP040687.1 Protein Homology CDS 316762 318156 . + 0 ID=cds-QIE14421.1;Parent=gene-IXO1088_001480;Dbxref=NCBI_GP:QIE14421.1;Name=QIE14421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159992.1;locus_tag=IXO1088_001480;product=type III secretion system effector protein;protein_id=QIE14421.1;transl_table=11 CP040687.1 Genbank gene 318259 318357 . - . ID=gene-IXO1088_001485;Name=IXO1088_001485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001485 CP040687.1 Protein Homology CDS 318259 318357 . - 0 ID=cds-QIE14422.1;Parent=gene-IXO1088_001485;Dbxref=NCBI_GP:QIE14422.1;Name=QIE14422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639530.1;locus_tag=IXO1088_001485;product=hypothetical protein;protein_id=QIE14422.1;transl_table=11 CP040687.1 Genbank gene 318606 318938 . - . ID=gene-IXO1088_001490;Name=IXO1088_001490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001490 CP040687.1 Protein Homology CDS 318606 318938 . - 0 ID=cds-QIE14423.1;Parent=gene-IXO1088_001490;Dbxref=NCBI_GP:QIE14423.1;Name=QIE14423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639529.1;locus_tag=IXO1088_001490;product=hypothetical protein;protein_id=QIE14423.1;transl_table=11 CP040687.1 Genbank gene 319079 319273 . - . ID=gene-IXO1088_001495;Name=IXO1088_001495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001495 CP040687.1 Protein Homology CDS 319079 319273 . - 0 ID=cds-QIE14424.1;Parent=gene-IXO1088_001495;Dbxref=NCBI_GP:QIE14424.1;Name=QIE14424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302537.1;locus_tag=IXO1088_001495;product=hypothetical protein;protein_id=QIE14424.1;transl_table=11 CP040687.1 Genbank gene 319274 319519 . + . ID=gene-IXO1088_001500;Name=IXO1088_001500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001500 CP040687.1 Protein Homology CDS 319274 319519 . + 0 ID=cds-QIE14425.1;Parent=gene-IXO1088_001500;Dbxref=NCBI_GP:QIE14425.1;Name=QIE14425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302536.1;locus_tag=IXO1088_001500;product=hypothetical protein;protein_id=QIE14425.1;transl_table=11 CP040687.1 Genbank gene 319635 320069 . + . ID=gene-IXO1088_001505;Name=IXO1088_001505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001505 CP040687.1 Protein Homology CDS 319635 320069 . + 0 ID=cds-QIE14426.1;Parent=gene-IXO1088_001505;Dbxref=NCBI_GP:QIE14426.1;Name=QIE14426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304496.1;locus_tag=IXO1088_001505;product=PAAR domain-containing protein;protein_id=QIE14426.1;transl_table=11 CP040687.1 Genbank gene 320072 320548 . + . ID=gene-IXO1088_001510;Name=IXO1088_001510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001510 CP040687.1 Protein Homology CDS 320072 320548 . + 0 ID=cds-QIE14427.1;Parent=gene-IXO1088_001510;Dbxref=NCBI_GP:QIE14427.1;Name=QIE14427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302534.1;locus_tag=IXO1088_001510;product=DUF4123 domain-containing protein;protein_id=QIE14427.1;transl_table=11 CP040687.1 Genbank gene 320541 320873 . + . ID=gene-IXO1088_001515;Name=IXO1088_001515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001515 CP040687.1 Protein Homology CDS 320541 320873 . + 0 ID=cds-QIE14428.1;Parent=gene-IXO1088_001515;Dbxref=NCBI_GP:QIE14428.1;Name=QIE14428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260740.1;locus_tag=IXO1088_001515;product=hypothetical protein;protein_id=QIE14428.1;transl_table=11 CP040687.1 Genbank gene 320972 321667 . + . ID=gene-IXO1088_001520;Name=IXO1088_001520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001520 CP040687.1 Protein Homology CDS 320972 321667 . + 0 ID=cds-QIE17825.1;Parent=gene-IXO1088_001520;Dbxref=NCBI_GP:QIE17825.1;Name=QIE17825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501329.1;locus_tag=IXO1088_001520;product=hypothetical protein;protein_id=QIE17825.1;transl_table=11 CP040687.1 Genbank gene 321664 322422 . + . ID=gene-IXO1088_001525;Name=IXO1088_001525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001525 CP040687.1 Protein Homology CDS 321664 322422 . + 0 ID=cds-QIE14429.1;Parent=gene-IXO1088_001525;Dbxref=NCBI_GP:QIE14429.1;Name=QIE14429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305439.1;locus_tag=IXO1088_001525;product=hypothetical protein;protein_id=QIE14429.1;transl_table=11 CP040687.1 Genbank gene 322631 322879 . - . ID=gene-IXO1088_001530;Name=IXO1088_001530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001530 CP040687.1 Protein Homology CDS 322631 322879 . - 0 ID=cds-QIE14430.1;Parent=gene-IXO1088_001530;Dbxref=NCBI_GP:QIE14430.1;Name=QIE14430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260739.1;locus_tag=IXO1088_001530;product=helix-turn-helix transcriptional regulator;protein_id=QIE14430.1;transl_table=11 CP040687.1 Genbank gene 323041 323307 . + . ID=gene-IXO1088_001535;Name=IXO1088_001535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001535 CP040687.1 Protein Homology CDS 323041 323307 . + 0 ID=cds-QIE17826.1;Parent=gene-IXO1088_001535;Dbxref=NCBI_GP:QIE17826.1;Name=QIE17826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005933439.1;locus_tag=IXO1088_001535;product=hypothetical protein;protein_id=QIE17826.1;transl_table=11 CP040687.1 Genbank pseudogene 323404 323481 . - . ID=gene-IXO1088_001540;Name=IXO1088_001540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001540;pseudo=true CP040687.1 Protein Homology CDS 323404 323481 . - 0 ID=cds-IXO1088_001540;Parent=gene-IXO1088_001540;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159991.1;locus_tag=IXO1088_001540;product=oxidoreductase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 323876 324972 . - . ID=gene-IXO1088_001545;Name=IXO1088_001545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001545;pseudo=true CP040687.1 Protein Homology CDS 323876 324972 . - 0 ID=cds-IXO1088_001545;Parent=gene-IXO1088_001545;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444510.1;locus_tag=IXO1088_001545;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 325124 325987 . + . ID=gene-IXO1088_001550;Name=IXO1088_001550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001550 CP040687.1 Protein Homology CDS 325124 325987 . + 0 ID=cds-QIE14431.1;Parent=gene-IXO1088_001550;Dbxref=NCBI_GP:QIE14431.1;Name=QIE14431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156935.1;locus_tag=IXO1088_001550;product=DUF2884 family protein;protein_id=QIE14431.1;transl_table=11 CP040687.1 Genbank gene 326236 326664 . - . ID=gene-IXO1088_001555;Name=IXO1088_001555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001555 CP040687.1 Protein Homology CDS 326236 326664 . - 0 ID=cds-QIE14432.1;Parent=gene-IXO1088_001555;Dbxref=NCBI_GP:QIE14432.1;Name=QIE14432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635659.1;locus_tag=IXO1088_001555;product=organic hydroperoxide resistance protein;protein_id=QIE14432.1;transl_table=11 CP040687.1 Genbank gene 326766 327224 . - . ID=gene-IXO1088_001560;Name=IXO1088_001560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001560 CP040687.1 Protein Homology CDS 326766 327224 . - 0 ID=cds-QIE14433.1;Parent=gene-IXO1088_001560;Dbxref=NCBI_GP:QIE14433.1;Name=QIE14433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968315.1;locus_tag=IXO1088_001560;product=MarR family transcriptional regulator;protein_id=QIE14433.1;transl_table=11 CP040687.1 Genbank gene 327571 327647 . + . ID=gene-IXO1088_001565;Name=IXO1088_001565;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_001565 CP040687.1 cmsearch ncRNA 327571 327647 . + . ID=rna-IXO1088_001565;Parent=gene-IXO1088_001565;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_001565;product=sX9 sRNA CP040687.1 cmsearch exon 327571 327647 . + . ID=exon-IXO1088_001565-1;Parent=rna-IXO1088_001565;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_001565;product=sX9 sRNA CP040687.1 Genbank pseudogene 327741 328700 . + . ID=gene-IXO1088_001570;Name=IXO1088_001570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001570;pseudo=true CP040687.1 Protein Homology CDS 327741 328700 . + 0 ID=cds-IXO1088_001570;Parent=gene-IXO1088_001570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052641.1;locus_tag=IXO1088_001570;product=DUF3182 family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 328691 329647 . - . ID=gene-IXO1088_001575;Name=IXO1088_001575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001575 CP040687.1 Protein Homology CDS 328691 329647 . - 0 ID=cds-QIE14434.1;Parent=gene-IXO1088_001575;Dbxref=NCBI_GP:QIE14434.1;Name=QIE14434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_082322974.1;locus_tag=IXO1088_001575;product=IS30 family transposase;protein_id=QIE14434.1;transl_table=11 CP040687.1 Genbank pseudogene 329664 329804 . - . ID=gene-IXO1088_001580;Name=IXO1088_001580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001580;pseudo=true CP040687.1 Protein Homology CDS 329664 329804 . - 0 ID=cds-IXO1088_001580;Parent=gene-IXO1088_001580;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409568.1;locus_tag=IXO1088_001580;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 329750 331069 . - . ID=gene-IXO1088_001585;Name=IXO1088_001585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001585 CP040687.1 Protein Homology CDS 329750 331069 . - 0 ID=cds-QIE14435.1;Parent=gene-IXO1088_001585;Dbxref=NCBI_GP:QIE14435.1;Name=QIE14435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_001585;product=IS701 family transposase;protein_id=QIE14435.1;transl_table=11 CP040687.1 Genbank gene 331198 331996 . + . ID=gene-IXO1088_001590;Name=IXO1088_001590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001590 CP040687.1 Protein Homology CDS 331198 331469 . + 0 ID=cds-QIE14436.1;Parent=gene-IXO1088_001590;Dbxref=NCBI_GP:QIE14436.1;Name=QIE14436.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_001590;product=IS5 family transposase;protein_id=QIE14436.1;transl_table=11 CP040687.1 Protein Homology CDS 331468 331996 . + 1 ID=cds-QIE14436.1;Parent=gene-IXO1088_001590;Dbxref=NCBI_GP:QIE14436.1;Name=QIE14436.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_001590;product=IS5 family transposase;protein_id=QIE14436.1;transl_table=11 CP040687.1 Genbank gene 332029 332709 . - . ID=gene-IXO1088_001595;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=IXO1088_001595 CP040687.1 Protein Homology CDS 332029 332709 . - 0 ID=cds-QIE14437.1;Parent=gene-IXO1088_001595;Dbxref=NCBI_GP:QIE14437.1;Name=QIE14437.1;gbkey=CDS;gene=fabR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260727.1;locus_tag=IXO1088_001595;product=HTH-type transcriptional repressor FabR;protein_id=QIE14437.1;transl_table=11 CP040687.1 Genbank gene 332784 333878 . + . ID=gene-IXO1088_001600;Name=IXO1088_001600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001600 CP040687.1 Protein Homology CDS 332784 333878 . + 0 ID=cds-QIE14438.1;Parent=gene-IXO1088_001600;Dbxref=NCBI_GP:QIE14438.1;Name=QIE14438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639219.1;locus_tag=IXO1088_001600;product=ferredoxin reductase;protein_id=QIE14438.1;transl_table=11 CP040687.1 Genbank gene 333888 335009 . + . ID=gene-IXO1088_001605;Name=IXO1088_001605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001605 CP040687.1 Protein Homology CDS 333888 335009 . + 0 ID=cds-QIE14439.1;Parent=gene-IXO1088_001605;Dbxref=NCBI_GP:QIE14439.1;Name=QIE14439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639218.1;locus_tag=IXO1088_001605;product=acyl-CoA desaturase;protein_id=QIE14439.1;transl_table=11 CP040687.1 Genbank gene 335075 336199 . - . ID=gene-IXO1088_001610;Name=IXO1088_001610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001610 CP040687.1 Protein Homology CDS 335075 336199 . - 0 ID=cds-QIE14440.1;Parent=gene-IXO1088_001610;Dbxref=NCBI_GP:QIE14440.1;Name=QIE14440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443768.1;locus_tag=IXO1088_001610;product=EAL domain-containing protein;protein_id=QIE14440.1;transl_table=11 CP040687.1 Genbank gene 336193 336956 . - . ID=gene-IXO1088_001615;Name=IXO1088_001615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001615 CP040687.1 Protein Homology CDS 336641 336956 . - 0 ID=cds-QIE14441.1;Parent=gene-IXO1088_001615;Dbxref=NCBI_GP:QIE14441.1;Name=QIE14441.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_001615;product=IS5 family transposase;protein_id=QIE14441.1;transl_table=11 CP040687.1 Protein Homology CDS 336193 336641 . - 2 ID=cds-QIE14441.1;Parent=gene-IXO1088_001615;Dbxref=NCBI_GP:QIE14441.1;Name=QIE14441.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_001615;product=IS5 family transposase;protein_id=QIE14441.1;transl_table=11 CP040687.1 Genbank pseudogene 337002 337454 . - . ID=gene-IXO1088_001620;Name=IXO1088_001620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001620;pseudo=true CP040687.1 Protein Homology CDS 337002 337454 . - 0 ID=cds-IXO1088_001620;Parent=gene-IXO1088_001620;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639217.1;locus_tag=IXO1088_001620;product=EAL domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 337876 338013 . + . ID=gene-IXO1088_001625;Name=IXO1088_001625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001625 CP040687.1 Protein Homology CDS 337876 338013 . + 0 ID=cds-QIE17827.1;Parent=gene-IXO1088_001625;Dbxref=NCBI_GP:QIE17827.1;Name=QIE17827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639216.1;locus_tag=IXO1088_001625;product=hypothetical protein;protein_id=QIE17827.1;transl_table=11 CP040687.1 Genbank pseudogene 338168 338712 . - . ID=gene-IXO1088_001630;Name=IXO1088_001630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001630;pseudo=true CP040687.1 Protein Homology CDS 338168 338712 . - 0 ID=cds-IXO1088_001630;Parent=gene-IXO1088_001630;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639215.1;locus_tag=IXO1088_001630;product=lipocalin family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 338889 339687 . - . ID=gene-IXO1088_001635;Name=IXO1088_001635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001635 CP040687.1 Protein Homology CDS 339416 339687 . - 0 ID=cds-QIE14442.1;Parent=gene-IXO1088_001635;Dbxref=NCBI_GP:QIE14442.1;Name=QIE14442.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_001635;product=IS5 family transposase;protein_id=QIE14442.1;transl_table=11 CP040687.1 Protein Homology CDS 338889 339417 . - 1 ID=cds-QIE14442.1;Parent=gene-IXO1088_001635;Dbxref=NCBI_GP:QIE14442.1;Name=QIE14442.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_001635;product=IS5 family transposase;protein_id=QIE14442.1;transl_table=11 CP040687.1 Genbank gene 339727 339803 . - . ID=gene-IXO1088_001640;Name=IXO1088_001640;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_001640 CP040687.1 cmsearch ncRNA 339727 339803 . - . ID=rna-IXO1088_001640;Parent=gene-IXO1088_001640;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_001640;product=sX9 sRNA CP040687.1 cmsearch exon 339727 339803 . - . ID=exon-IXO1088_001640-1;Parent=rna-IXO1088_001640;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_001640;product=sX9 sRNA CP040687.1 Genbank gene 340104 341138 . - . ID=gene-IXO1088_001645;Name=IXO1088_001645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001645 CP040687.1 Protein Homology CDS 340104 341138 . - 0 ID=cds-QIE14443.1;Parent=gene-IXO1088_001645;Dbxref=NCBI_GP:QIE14443.1;Name=QIE14443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639461.1;locus_tag=IXO1088_001645;product=alpha-N-arabinofuranosidase;protein_id=QIE14443.1;transl_table=11 CP040687.1 Genbank gene 341170 342657 . - . ID=gene-IXO1088_001650;Name=IXO1088_001650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001650 CP040687.1 Protein Homology CDS 341170 342657 . - 0 ID=cds-QIE14444.1;Parent=gene-IXO1088_001650;Dbxref=NCBI_GP:QIE14444.1;Name=QIE14444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155198.1;locus_tag=IXO1088_001650;product=MFS transporter;protein_id=QIE14444.1;transl_table=11 CP040687.1 Genbank gene 342756 345629 . - . ID=gene-IXO1088_001655;Name=IXO1088_001655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001655 CP040687.1 Protein Homology CDS 342756 345629 . - 0 ID=cds-QIE17828.1;Parent=gene-IXO1088_001655;Dbxref=NCBI_GP:QIE17828.1;Name=QIE17828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639459.1;locus_tag=IXO1088_001655;product=TonB-dependent receptor;protein_id=QIE17828.1;transl_table=11 CP040687.1 Genbank gene 345971 347452 . + . ID=gene-IXO1088_001660;Name=IXO1088_001660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001660 CP040687.1 Protein Homology CDS 345971 347452 . + 0 ID=cds-QIE14445.1;Parent=gene-IXO1088_001660;Dbxref=NCBI_GP:QIE14445.1;Name=QIE14445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639458.1;locus_tag=IXO1088_001660;product=MFS transporter;protein_id=QIE14445.1;transl_table=11 CP040687.1 Genbank pseudogene 347462 348452 . + . ID=gene-IXO1088_001665;Name=IXO1088_001665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001665;pseudo=true CP040687.1 Protein Homology CDS 347462 348452 . + 0 ID=cds-IXO1088_001665;Parent=gene-IXO1088_001665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485050.1;locus_tag=IXO1088_001665;product=endo-1%2C4-beta-xylanase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 348511 348841 . + . ID=gene-IXO1088_001670;Name=IXO1088_001670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001670;pseudo=true CP040687.1 Protein Homology CDS 348511 348841 . + 0 ID=cds-IXO1088_001670;Parent=gene-IXO1088_001670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485046.1;locus_tag=IXO1088_001670;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 348869 349846 . + . ID=gene-IXO1088_001675;Name=IXO1088_001675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001675 CP040687.1 Protein Homology CDS 348869 349846 . + 0 ID=cds-QIE14446.1;Parent=gene-IXO1088_001675;Dbxref=NCBI_GP:QIE14446.1;Name=QIE14446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376986.1;locus_tag=IXO1088_001675;product=endo-1%2C4-beta-xylanase;protein_id=QIE14446.1;transl_table=11 CP040687.1 Genbank gene 349887 351305 . + . ID=gene-IXO1088_001680;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=IXO1088_001680 CP040687.1 Protein Homology CDS 349887 351305 . + 0 ID=cds-QIE14447.1;Parent=gene-IXO1088_001680;Dbxref=NCBI_GP:QIE14447.1;Name=QIE14447.1;gbkey=CDS;gene=uxaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916173.1;locus_tag=IXO1088_001680;product=glucuronate isomerase;protein_id=QIE14447.1;transl_table=11 CP040687.1 Genbank gene 351532 352587 . + . ID=gene-IXO1088_001685;Name=IXO1088_001685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001685 CP040687.1 Protein Homology CDS 351532 352587 . + 0 ID=cds-QIE14448.1;Parent=gene-IXO1088_001685;Dbxref=NCBI_GP:QIE14448.1;Name=QIE14448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300493.1;locus_tag=IXO1088_001685;product=hypothetical protein;protein_id=QIE14448.1;transl_table=11 CP040687.1 Genbank pseudogene 352755 353129 . - . ID=gene-IXO1088_001690;Name=IXO1088_001690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001690;pseudo=true CP040687.1 Protein Homology CDS 352755 353129 . - 0 ID=cds-IXO1088_001690;Parent=gene-IXO1088_001690;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002801519.1;locus_tag=IXO1088_001690;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 353136 353339 . + . ID=gene-IXO1088_001695;Name=IXO1088_001695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001695;pseudo=true CP040687.1 Protein Homology CDS 353136 353339 . + 0 ID=cds-IXO1088_001695;Parent=gene-IXO1088_001695;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155220.1;locus_tag=IXO1088_001695;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 353565 355037 . - . ID=gene-IXO1088_001700;Name=IXO1088_001700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001700 CP040687.1 Protein Homology CDS 353565 355037 . - 0 ID=cds-QIE14449.1;Parent=gene-IXO1088_001700;Dbxref=NCBI_GP:QIE14449.1;Name=QIE14449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922858.1;locus_tag=IXO1088_001700;product=mannitol dehydrogenase family protein;protein_id=QIE14449.1;transl_table=11 CP040687.1 Genbank gene 355260 357974 . - . ID=gene-IXO1088_001705;Name=IXO1088_001705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001705 CP040687.1 Protein Homology CDS 355260 357974 . - 0 ID=cds-QIE14450.1;Parent=gene-IXO1088_001705;Dbxref=NCBI_GP:QIE14450.1;Name=QIE14450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443780.1;locus_tag=IXO1088_001705;product=glucan 1%2C4-alpha-glucosidase;protein_id=QIE14450.1;transl_table=11 CP040687.1 Genbank gene 357977 359677 . - . ID=gene-IXO1088_001710;Name=IXO1088_001710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001710 CP040687.1 Protein Homology CDS 357977 359677 . - 0 ID=cds-QIE14451.1;Parent=gene-IXO1088_001710;Dbxref=NCBI_GP:QIE14451.1;Name=QIE14451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260707.1;locus_tag=IXO1088_001710;product=glycoside hydrolase family 43 protein;protein_id=QIE14451.1;transl_table=11 CP040687.1 Genbank gene 359677 360936 . - . ID=gene-IXO1088_001715;Name=IXO1088_001715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001715 CP040687.1 Protein Homology CDS 359677 360936 . - 0 ID=cds-QIE14452.1;Parent=gene-IXO1088_001715;Dbxref=NCBI_GP:QIE14452.1;Name=QIE14452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639443.1;locus_tag=IXO1088_001715;product=D-galactonate dehydratase family protein;protein_id=QIE14452.1;transl_table=11 CP040687.1 Genbank gene 360948 362912 . - . ID=gene-IXO1088_001720;Name=IXO1088_001720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001720 CP040687.1 Protein Homology CDS 360948 362912 . - 0 ID=cds-QIE14453.1;Parent=gene-IXO1088_001720;Dbxref=NCBI_GP:QIE14453.1;Name=QIE14453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155225.1;locus_tag=IXO1088_001720;product=9-O-acetylesterase;protein_id=QIE14453.1;transl_table=11 CP040687.1 Genbank gene 362909 365104 . - . ID=gene-IXO1088_001725;Name=IXO1088_001725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001725 CP040687.1 Protein Homology CDS 362909 365104 . - 0 ID=cds-QIE14454.1;Parent=gene-IXO1088_001725;Dbxref=NCBI_GP:QIE14454.1;Name=QIE14454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409722.1;locus_tag=IXO1088_001725;product=alpha-glucuronidase;protein_id=QIE14454.1;transl_table=11 CP040687.1 Genbank gene 365280 366347 . + . ID=gene-IXO1088_001730;Name=IXO1088_001730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001730 CP040687.1 Protein Homology CDS 365280 366347 . + 0 ID=cds-QIE17829.1;Parent=gene-IXO1088_001730;Dbxref=NCBI_GP:QIE17829.1;Name=QIE17829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484990.1;locus_tag=IXO1088_001730;product=LacI family DNA-binding transcriptional regulator;protein_id=QIE17829.1;transl_table=11 CP040687.1 Genbank gene 366573 367910 . - . ID=gene-IXO1088_001735;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=IXO1088_001735 CP040687.1 Protein Homology CDS 366573 367910 . - 0 ID=cds-QIE14455.1;Parent=gene-IXO1088_001735;Dbxref=NCBI_GP:QIE14455.1;Name=QIE14455.1;gbkey=CDS;gene=xylA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639439.1;locus_tag=IXO1088_001735;product=xylose isomerase;protein_id=QIE14455.1;transl_table=11 CP040687.1 Genbank gene 367914 368423 . + . ID=gene-IXO1088_001740;Name=IXO1088_001740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001740 CP040687.1 Protein Homology CDS 367914 368423 . + 0 ID=cds-QIE14456.1;Parent=gene-IXO1088_001740;Dbxref=NCBI_GP:QIE14456.1;Name=QIE14456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505174.1;locus_tag=IXO1088_001740;product=hypothetical protein;protein_id=QIE14456.1;transl_table=11 CP040687.1 Genbank gene 368514 369431 . + . ID=gene-IXO1088_001745;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=IXO1088_001745 CP040687.1 Protein Homology CDS 368514 369431 . + 0 ID=cds-QIE14457.1;Parent=gene-IXO1088_001745;Dbxref=NCBI_GP:QIE14457.1;Name=QIE14457.1;gbkey=CDS;gene=ttcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374500.1;locus_tag=IXO1088_001745;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=QIE14457.1;transl_table=11 CP040687.1 Genbank gene 369495 370400 . + . ID=gene-IXO1088_001750;Name=IXO1088_001750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001750 CP040687.1 Protein Homology CDS 369495 370400 . + 0 ID=cds-QIE14458.1;Parent=gene-IXO1088_001750;Dbxref=NCBI_GP:QIE14458.1;Name=QIE14458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639437.1;locus_tag=IXO1088_001750;product=recombination-associated protein RdgC;protein_id=QIE14458.1;transl_table=11 CP040687.1 Genbank gene 371027 371812 . + . ID=gene-IXO1088_001755;Name=IXO1088_001755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001755 CP040687.1 Protein Homology CDS 371027 371812 . + 0 ID=cds-QIE14459.1;Parent=gene-IXO1088_001755;Dbxref=NCBI_GP:QIE14459.1;Name=QIE14459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374496.1;locus_tag=IXO1088_001755;product=M48 family metallopeptidase;protein_id=QIE14459.1;transl_table=11 CP040687.1 Genbank gene 371875 371950 . + . ID=gene-IXO1088_001760;Name=IXO1088_001760;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_001760 CP040687.1 cmsearch ncRNA 371875 371950 . + . ID=rna-IXO1088_001760;Parent=gene-IXO1088_001760;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_001760;product=sX9 sRNA CP040687.1 cmsearch exon 371875 371950 . + . ID=exon-IXO1088_001760-1;Parent=rna-IXO1088_001760;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_001760;product=sX9 sRNA CP040687.1 Genbank gene 372083 372541 . - . ID=gene-IXO1088_001765;Name=IXO1088_001765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001765 CP040687.1 Protein Homology CDS 372083 372541 . - 0 ID=cds-QIE14460.1;Parent=gene-IXO1088_001765;Dbxref=NCBI_GP:QIE14460.1;Name=QIE14460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409718.1;locus_tag=IXO1088_001765;product=hypothetical protein;protein_id=QIE14460.1;transl_table=11 CP040687.1 Genbank gene 372622 373377 . - . ID=gene-IXO1088_001770;Name=IXO1088_001770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001770 CP040687.1 Protein Homology CDS 372622 373377 . - 0 ID=cds-QIE14461.1;Parent=gene-IXO1088_001770;Dbxref=NCBI_GP:QIE14461.1;Name=QIE14461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409717.1;locus_tag=IXO1088_001770;product=alpha/beta hydrolase;protein_id=QIE14461.1;transl_table=11 CP040687.1 Genbank gene 373475 374440 . - . ID=gene-IXO1088_001775;Name=IXO1088_001775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001775 CP040687.1 Protein Homology CDS 373475 374440 . - 0 ID=cds-QIE14462.1;Parent=gene-IXO1088_001775;Dbxref=NCBI_GP:QIE14462.1;Name=QIE14462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639434.1;locus_tag=IXO1088_001775;product=ferrochelatase;protein_id=QIE14462.1;transl_table=11 CP040687.1 Genbank gene 374595 375497 . + . ID=gene-IXO1088_001780;Name=IXO1088_001780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001780 CP040687.1 Protein Homology CDS 374595 375497 . + 0 ID=cds-QIE14463.1;Parent=gene-IXO1088_001780;Dbxref=NCBI_GP:QIE14463.1;Name=QIE14463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115997.1;locus_tag=IXO1088_001780;product=hypothetical protein;protein_id=QIE14463.1;transl_table=11 CP040687.1 Genbank gene 375570 375797 . + . ID=gene-IXO1088_001785;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=IXO1088_001785 CP040687.1 Protein Homology CDS 375570 375797 . + 0 ID=cds-QIE14464.1;Parent=gene-IXO1088_001785;Dbxref=NCBI_GP:QIE14464.1;Name=QIE14464.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639432.1;locus_tag=IXO1088_001785;product=Sec-independent protein translocase subunit TatA;protein_id=QIE14464.1;transl_table=11 CP040687.1 Genbank gene 375813 376454 . + . ID=gene-IXO1088_001790;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=IXO1088_001790 CP040687.1 Protein Homology CDS 375813 376454 . + 0 ID=cds-QIE14465.1;Parent=gene-IXO1088_001790;Dbxref=NCBI_GP:QIE14465.1;Name=QIE14465.1;gbkey=CDS;gene=tatB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349077.1;locus_tag=IXO1088_001790;product=twin-arginine translocase subunit TatB;protein_id=QIE14465.1;transl_table=11 CP040687.1 Genbank gene 376451 377206 . + . ID=gene-IXO1088_001795;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=IXO1088_001795 CP040687.1 Protein Homology CDS 376451 377206 . + 0 ID=cds-QIE14466.1;Parent=gene-IXO1088_001795;Dbxref=NCBI_GP:QIE14466.1;Name=QIE14466.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302261.1;locus_tag=IXO1088_001795;product=twin-arginine translocase subunit TatC;protein_id=QIE14466.1;transl_table=11 CP040687.1 Genbank gene 377358 378257 . - . ID=gene-IXO1088_001800;Name=IXO1088_001800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001800 CP040687.1 Protein Homology CDS 377358 378257 . - 0 ID=cds-QIE14467.1;Parent=gene-IXO1088_001800;Dbxref=NCBI_GP:QIE14467.1;Name=QIE14467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639429.2;locus_tag=IXO1088_001800;product=hypothetical protein;protein_id=QIE14467.1;transl_table=11 CP040687.1 Genbank gene 378317 379069 . - . ID=gene-IXO1088_001805;Name=IXO1088_001805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001805 CP040687.1 Protein Homology CDS 378317 379069 . - 0 ID=cds-QIE14468.1;Parent=gene-IXO1088_001805;Dbxref=NCBI_GP:QIE14468.1;Name=QIE14468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154683.1;locus_tag=IXO1088_001805;product=glutamine amidotransferase;protein_id=QIE14468.1;transl_table=11 CP040687.1 Genbank gene 379205 379441 . + . ID=gene-IXO1088_001810;Name=IXO1088_001810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001810 CP040687.1 Protein Homology CDS 379205 379441 . + 0 ID=cds-QIE14469.1;Parent=gene-IXO1088_001810;Dbxref=NCBI_GP:QIE14469.1;Name=QIE14469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484960.1;locus_tag=IXO1088_001810;product=hypothetical protein;protein_id=QIE14469.1;transl_table=11 CP040687.1 Genbank gene 379469 379699 . + . ID=gene-IXO1088_001815;Name=IXO1088_001815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001815 CP040687.1 Protein Homology CDS 379469 379699 . + 0 ID=cds-QIE14470.1;Parent=gene-IXO1088_001815;Dbxref=NCBI_GP:QIE14470.1;Name=QIE14470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444597.1;locus_tag=IXO1088_001815;product=hypothetical protein;protein_id=QIE14470.1;transl_table=11 CP040687.1 Genbank gene 379613 380411 . - . ID=gene-IXO1088_001820;Name=IXO1088_001820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001820 CP040687.1 Protein Homology CDS 380140 380411 . - 0 ID=cds-QIE14471.1;Parent=gene-IXO1088_001820;Dbxref=NCBI_GP:QIE14471.1;Name=QIE14471.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_001820;product=IS5 family transposase;protein_id=QIE14471.1;transl_table=11 CP040687.1 Protein Homology CDS 379613 380141 . - 1 ID=cds-QIE14471.1;Parent=gene-IXO1088_001820;Dbxref=NCBI_GP:QIE14471.1;Name=QIE14471.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_001820;product=IS5 family transposase;protein_id=QIE14471.1;transl_table=11 CP040687.1 Genbank gene 380552 389335 . + . ID=gene-IXO1088_001825;Name=IXO1088_001825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001825 CP040687.1 Protein Homology CDS 380552 389335 . + 0 ID=cds-QIE14472.1;Parent=gene-IXO1088_001825;Dbxref=NCBI_GP:QIE14472.1;Name=QIE14472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409710.1;locus_tag=IXO1088_001825;product=hypothetical protein;protein_id=QIE14472.1;transl_table=11 CP040687.1 Genbank gene 389721 391535 . - . ID=gene-IXO1088_001830;Name=IXO1088_001830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001830 CP040687.1 Protein Homology CDS 389721 391535 . - 0 ID=cds-QIE14473.1;Parent=gene-IXO1088_001830;Dbxref=NCBI_GP:QIE14473.1;Name=QIE14473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639427.1;locus_tag=IXO1088_001830;product=type II/IV secretion system protein;protein_id=QIE14473.1;transl_table=11 CP040687.1 Genbank gene 391625 392533 . + . ID=gene-IXO1088_001835;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=IXO1088_001835 CP040687.1 Protein Homology CDS 391625 392533 . + 0 ID=cds-QIE14474.1;Parent=gene-IXO1088_001835;Dbxref=NCBI_GP:QIE14474.1;Name=QIE14474.1;gbkey=CDS;gene=glyQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639426.1;locus_tag=IXO1088_001835;product=glycine--tRNA ligase subunit alpha;protein_id=QIE14474.1;transl_table=11 CP040687.1 Genbank gene 392822 395059 . + . ID=gene-IXO1088_001840;Name=IXO1088_001840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001840 CP040687.1 Protein Homology CDS 392822 395059 . + 0 ID=cds-QIE14475.1;Parent=gene-IXO1088_001840;Dbxref=NCBI_GP:QIE14475.1;Name=QIE14475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639425.1;locus_tag=IXO1088_001840;product=glycine--tRNA ligase subunit beta;protein_id=QIE14475.1;transl_table=11 CP040687.1 Genbank gene 395059 396660 . + . ID=gene-IXO1088_001845;Name=IXO1088_001845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001845 CP040687.1 Protein Homology CDS 395059 396660 . + 0 ID=cds-QIE14476.1;Parent=gene-IXO1088_001845;Dbxref=NCBI_GP:QIE14476.1;Name=QIE14476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374446.1;locus_tag=IXO1088_001845;product=sulfotransferase family protein;protein_id=QIE14476.1;transl_table=11 CP040687.1 Genbank gene 396913 399672 . - . ID=gene-IXO1088_001850;Name=IXO1088_001850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001850 CP040687.1 Protein Homology CDS 396913 399672 . - 0 ID=cds-QIE14477.1;Parent=gene-IXO1088_001850;Dbxref=NCBI_GP:QIE14477.1;Name=QIE14477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809380.1;locus_tag=IXO1088_001850;product=TonB-dependent receptor;protein_id=QIE14477.1;transl_table=11 CP040687.1 Genbank pseudogene 399849 400118 . - . ID=gene-IXO1088_001855;Name=IXO1088_001855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001855;pseudo=true CP040687.1 Protein Homology CDS 399849 400118 . - 0 ID=cds-IXO1088_001855;Parent=gene-IXO1088_001855;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611813.1;locus_tag=IXO1088_001855;product=IS4 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 400432 401052 . - . ID=gene-IXO1088_001860;Name=IXO1088_001860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001860;pseudo=true CP040687.1 Protein Homology CDS 400432 401052 . - 0 ID=cds-IXO1088_001860;Parent=gene-IXO1088_001860;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849823.1;locus_tag=IXO1088_001860;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 401173 402267 . - . ID=gene-IXO1088_001865;Name=IXO1088_001865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001865 CP040687.1 Protein Homology CDS 401173 402267 . - 0 ID=cds-QIE14478.1;Parent=gene-IXO1088_001865;Dbxref=NCBI_GP:QIE14478.1;Name=QIE14478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635656.1;locus_tag=IXO1088_001865;product=AFG1 family ATPase;protein_id=QIE14478.1;transl_table=11 CP040687.1 Genbank gene 402346 403008 . - . ID=gene-IXO1088_001870;Name=IXO1088_001870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001870 CP040687.1 Protein Homology CDS 402346 403008 . - 0 ID=cds-QIE14479.1;Parent=gene-IXO1088_001870;Dbxref=NCBI_GP:QIE14479.1;Name=QIE14479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370426.1;locus_tag=IXO1088_001870;product=alpha/beta fold hydrolase;protein_id=QIE14479.1;transl_table=11 CP040687.1 Genbank gene 403225 403950 . + . ID=gene-IXO1088_001875;Name=IXO1088_001875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001875 CP040687.1 Protein Homology CDS 403225 403950 . + 0 ID=cds-QIE14480.1;Parent=gene-IXO1088_001875;Dbxref=NCBI_GP:QIE14480.1;Name=QIE14480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260682.1;locus_tag=IXO1088_001875;product=EamA/RhaT family transporter;protein_id=QIE14480.1;transl_table=11 CP040687.1 Genbank gene 404049 405362 . + . ID=gene-IXO1088_001880;Name=IXO1088_001880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001880 CP040687.1 Protein Homology CDS 404049 405362 . + 0 ID=cds-QIE14481.1;Parent=gene-IXO1088_001880;Dbxref=NCBI_GP:QIE14481.1;Name=QIE14481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260681.1;locus_tag=IXO1088_001880;product=type III effector protein XopR;protein_id=QIE14481.1;transl_table=11 CP040687.1 Genbank gene 405477 406802 . - . ID=gene-IXO1088_001885;Name=IXO1088_001885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001885 CP040687.1 Protein Homology CDS 405477 406802 . - 0 ID=cds-QIE14482.1;Parent=gene-IXO1088_001885;Dbxref=NCBI_GP:QIE14482.1;Name=QIE14482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849151.1;locus_tag=IXO1088_001885;product=GTP-binding protein;protein_id=QIE14482.1;transl_table=11 CP040687.1 Genbank gene 406864 407250 . + . ID=gene-IXO1088_001890;Name=IXO1088_001890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001890 CP040687.1 Protein Homology CDS 406864 407250 . + 0 ID=cds-QIE14483.1;Parent=gene-IXO1088_001890;Dbxref=NCBI_GP:QIE14483.1;Name=QIE14483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117606.1;locus_tag=IXO1088_001890;product=MerC family mercury resistance protein;protein_id=QIE14483.1;transl_table=11 CP040687.1 Genbank gene 407341 409059 . - . ID=gene-IXO1088_001895;Name=IXO1088_001895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001895 CP040687.1 Protein Homology CDS 407341 409059 . - 0 ID=cds-QIE14484.1;Parent=gene-IXO1088_001895;Dbxref=NCBI_GP:QIE14484.1;Name=QIE14484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443806.1;locus_tag=IXO1088_001895;product=ExeM/NucH family extracellular endonuclease;protein_id=QIE14484.1;transl_table=11 CP040687.1 Genbank gene 409331 409849 . - . ID=gene-IXO1088_001900;Name=IXO1088_001900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001900 CP040687.1 Protein Homology CDS 409331 409849 . - 0 ID=cds-QIE14485.1;Parent=gene-IXO1088_001900;Dbxref=NCBI_GP:QIE14485.1;Name=QIE14485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635649.1;locus_tag=IXO1088_001900;product=cytochrome c5 family protein;protein_id=QIE14485.1;transl_table=11 CP040687.1 Genbank pseudogene 410141 410771 . + . ID=gene-IXO1088_001905;Name=IXO1088_001905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001905;pseudo=true CP040687.1 Protein Homology CDS 410141 410771 . + 0 ID=cds-IXO1088_001905;Parent=gene-IXO1088_001905;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450084.1;locus_tag=IXO1088_001905;product=DUF4198 domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 410968 411279 . + . ID=gene-IXO1088_001910;Name=IXO1088_001910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001910 CP040687.1 Protein Homology CDS 410968 411279 . + 0 ID=cds-QIE14486.1;Parent=gene-IXO1088_001910;Dbxref=NCBI_GP:QIE14486.1;Name=QIE14486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112733.1;locus_tag=IXO1088_001910;product=DUF3649 domain-containing protein;protein_id=QIE14486.1;transl_table=11 CP040687.1 Genbank pseudogene 411276 412907 . + . ID=gene-IXO1088_001915;Name=IXO1088_001915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001915;pseudo=true CP040687.1 Protein Homology CDS 411276 412907 . + 0 ID=cds-IXO1088_001915;Parent=gene-IXO1088_001915;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635646.1;locus_tag=IXO1088_001915;product=PepSY domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 412904 413239 . + . ID=gene-IXO1088_001920;Name=IXO1088_001920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001920 CP040687.1 Protein Homology CDS 412904 413239 . + 0 ID=cds-QIE14487.1;Parent=gene-IXO1088_001920;Dbxref=NCBI_GP:QIE14487.1;Name=QIE14487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156920.1;locus_tag=IXO1088_001920;product=DUF3325 domain-containing protein;protein_id=QIE14487.1;transl_table=11 CP040687.1 Genbank gene 413282 413470 . + . ID=gene-IXO1088_001925;Name=IXO1088_001925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001925 CP040687.1 GeneMarkS-2+ CDS 413282 413470 . + 0 ID=cds-QIE14488.1;Parent=gene-IXO1088_001925;Dbxref=NCBI_GP:QIE14488.1;Name=QIE14488.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_001925;product=hypothetical protein;protein_id=QIE14488.1;transl_table=11 CP040687.1 Genbank pseudogene 413560 413749 . - . ID=gene-IXO1088_001930;Name=IXO1088_001930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001930;pseudo=true CP040687.1 Protein Homology CDS 413560 413749 . - 0 ID=cds-IXO1088_001930;Parent=gene-IXO1088_001930;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505287.1;locus_tag=IXO1088_001930;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 413801 414421 . - . ID=gene-IXO1088_001935;Name=IXO1088_001935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001935 CP040687.1 Protein Homology CDS 413801 414421 . - 0 ID=cds-QIE14489.1;Parent=gene-IXO1088_001935;Dbxref=NCBI_GP:QIE14489.1;Name=QIE14489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505286.1;locus_tag=IXO1088_001935;product=TetR/AcrR family transcriptional regulator;protein_id=QIE14489.1;transl_table=11 CP040687.1 Genbank gene 414550 415713 . + . ID=gene-IXO1088_001940;Name=IXO1088_001940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001940 CP040687.1 Protein Homology CDS 414550 415713 . + 0 ID=cds-QIE14490.1;Parent=gene-IXO1088_001940;Dbxref=NCBI_GP:QIE14490.1;Name=QIE14490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635641.1;locus_tag=IXO1088_001940;product=isovaleryl-CoA dehydrogenase;protein_id=QIE14490.1;transl_table=11 CP040687.1 Genbank gene 415724 417334 . + . ID=gene-IXO1088_001945;Name=IXO1088_001945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001945 CP040687.1 Protein Homology CDS 415724 417334 . + 0 ID=cds-QIE14491.1;Parent=gene-IXO1088_001945;Dbxref=NCBI_GP:QIE14491.1;Name=QIE14491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635640.1;locus_tag=IXO1088_001945;product=methylcrotonoyl-CoA carboxylase;protein_id=QIE14491.1;transl_table=11 CP040687.1 Genbank gene 417577 419604 . + . ID=gene-IXO1088_001950;Name=IXO1088_001950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001950 CP040687.1 Protein Homology CDS 417577 419604 . + 0 ID=cds-QIE14492.1;Parent=gene-IXO1088_001950;Dbxref=NCBI_GP:QIE14492.1;Name=QIE14492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089033.1;locus_tag=IXO1088_001950;product=acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha;protein_id=QIE14492.1;transl_table=11 CP040687.1 Genbank gene 419704 421788 . + . ID=gene-IXO1088_001955;Name=IXO1088_001955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001955 CP040687.1 Protein Homology CDS 419704 421788 . + 0 ID=cds-QIE14493.1;Parent=gene-IXO1088_001955;Dbxref=NCBI_GP:QIE14493.1;Name=QIE14493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635638.1;locus_tag=IXO1088_001955;product=S9 family peptidase;protein_id=QIE14493.1;transl_table=11 CP040687.1 Genbank pseudogene 422075 423091 . - . ID=gene-IXO1088_001960;Name=IXO1088_001960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001960;pseudo=true CP040687.1 Protein Homology CDS 422075 423091 . - 0 ID=cds-IXO1088_001960;Parent=gene-IXO1088_001960;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229360.1;locus_tag=IXO1088_001960;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 423143 423787 . + . ID=gene-IXO1088_001965;Name=IXO1088_001965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001965;pseudo=true CP040687.1 Protein Homology CDS 423143 423787 . + 0 ID=cds-IXO1088_001965;Parent=gene-IXO1088_001965;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006226249.1;locus_tag=IXO1088_001965;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 423938 424105 . - . ID=gene-IXO1088_001970;Name=IXO1088_001970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001970;pseudo=true CP040687.1 Protein Homology CDS 423938 424105 . - 0 ID=cds-IXO1088_001970;Parent=gene-IXO1088_001970;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_001970;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 424176 425275 . + . ID=gene-IXO1088_001975;Name=IXO1088_001975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001975;pseudo=true CP040687.1 Protein Homology CDS 424176 425275 . + 0 ID=cds-IXO1088_001975;Parent=gene-IXO1088_001975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1088_001975;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 425340 425534 . - . ID=gene-IXO1088_001980;Name=IXO1088_001980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_001980 CP040687.1 Protein Homology CDS 425340 425534 . - 0 ID=cds-QIE14494.1;Parent=gene-IXO1088_001980;Dbxref=NCBI_GP:QIE14494.1;Name=QIE14494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505351.1;locus_tag=IXO1088_001980;product=hypothetical protein;protein_id=QIE14494.1;transl_table=11 CP040687.1 Genbank pseudogene 425573 425755 . - . ID=gene-IXO1088_001985;Name=IXO1088_001985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001985;pseudo=true CP040687.1 Protein Homology CDS 425573 425755 . - 0 ID=cds-IXO1088_001985;Parent=gene-IXO1088_001985;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445996.1;locus_tag=IXO1088_001985;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 425754 426311 . + . ID=gene-IXO1088_001990;Name=IXO1088_001990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001990;pseudo=true CP040687.1 Protein Homology CDS 425754 426311 . + 0 ID=cds-IXO1088_001990;Parent=gene-IXO1088_001990;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1088_001990;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 426332 426448 . - . ID=gene-IXO1088_001995;Name=IXO1088_001995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_001995;pseudo=true CP040687.1 Protein Homology CDS 426332 426448 . - 0 ID=cds-IXO1088_001995;Parent=gene-IXO1088_001995;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408472.1;locus_tag=IXO1088_001995;product=IS630 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 426574 427893 . + . ID=gene-IXO1088_002000;Name=IXO1088_002000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002000 CP040687.1 Protein Homology CDS 426574 427893 . + 0 ID=cds-QIE14495.1;Parent=gene-IXO1088_002000;Dbxref=NCBI_GP:QIE14495.1;Name=QIE14495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_002000;product=IS701 family transposase;protein_id=QIE14495.1;transl_table=11 CP040687.1 Genbank gene 427896 428753 . - . ID=gene-IXO1088_002005;Name=uraH;gbkey=Gene;gene=uraH;gene_biotype=protein_coding;locus_tag=IXO1088_002005 CP040687.1 Protein Homology CDS 427896 428753 . - 0 ID=cds-QIE14496.1;Parent=gene-IXO1088_002005;Dbxref=NCBI_GP:QIE14496.1;Name=QIE14496.1;gbkey=CDS;gene=uraH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409689.1;locus_tag=IXO1088_002005;product=hydroxyisourate hydrolase;protein_id=QIE14496.1;transl_table=11 CP040687.1 Genbank gene 428639 429217 . - . ID=gene-IXO1088_002010;Name=uraD;gbkey=Gene;gene=uraD;gene_biotype=protein_coding;locus_tag=IXO1088_002010 CP040687.1 Protein Homology CDS 428639 429217 . - 0 ID=cds-QIE17830.1;Parent=gene-IXO1088_002010;Dbxref=NCBI_GP:QIE17830.1;Name=QIE17830.1;gbkey=CDS;gene=uraD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409688.1;locus_tag=IXO1088_002010;product=2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase;protein_id=QIE17830.1;transl_table=11 CP040687.1 Genbank gene 429237 429632 . - . ID=gene-IXO1088_002015;Name=IXO1088_002015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002015 CP040687.1 Protein Homology CDS 429237 429632 . - 0 ID=cds-QIE14497.1;Parent=gene-IXO1088_002015;Dbxref=NCBI_GP:QIE14497.1;Name=QIE14497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450976.1;locus_tag=IXO1088_002015;product=DUF3225 domain-containing protein;protein_id=QIE14497.1;transl_table=11 CP040687.1 Genbank gene 429629 430519 . - . ID=gene-IXO1088_002020;Name=puuE;gbkey=Gene;gene=puuE;gene_biotype=protein_coding;locus_tag=IXO1088_002020 CP040687.1 Protein Homology CDS 429629 430519 . - 0 ID=cds-QIE14498.1;Parent=gene-IXO1088_002020;Dbxref=NCBI_GP:QIE14498.1;Name=QIE14498.1;gbkey=CDS;gene=puuE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635677.1;locus_tag=IXO1088_002020;product=allantoinase PuuE;protein_id=QIE14498.1;transl_table=11 CP040687.1 Genbank gene 430516 431772 . - . ID=gene-IXO1088_002025;Name=IXO1088_002025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002025 CP040687.1 Protein Homology CDS 430516 431772 . - 0 ID=cds-QIE14499.1;Parent=gene-IXO1088_002025;Dbxref=NCBI_GP:QIE14499.1;Name=QIE14499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635678.1;locus_tag=IXO1088_002025;product=alanine--glyoxylate aminotransferase family protein;protein_id=QIE14499.1;transl_table=11 CP040687.1 Genbank pseudogene 431762 433034 . - . ID=gene-IXO1088_002030;Name=IXO1088_002030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002030;pseudo=true CP040687.1 Protein Homology CDS 431762 433034 . - 0 ID=cds-IXO1088_002030;Parent=gene-IXO1088_002030;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572340.1;locus_tag=IXO1088_002030;product=allantoate amidohydrolase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 433133 434191 . - . ID=gene-IXO1088_002035;Name=IXO1088_002035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002035 CP040687.1 Protein Homology CDS 433133 434191 . - 0 ID=cds-QIE14500.1;Parent=gene-IXO1088_002035;Dbxref=NCBI_GP:QIE14500.1;Name=QIE14500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408472.1;locus_tag=IXO1088_002035;product=IS630 family transposase;protein_id=QIE14500.1;transl_table=11 CP040687.1 Genbank gene 434215 434640 . - . ID=gene-IXO1088_002040;Name=IXO1088_002040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002040 CP040687.1 Protein Homology CDS 434215 434640 . - 0 ID=cds-QIE14501.1;Parent=gene-IXO1088_002040;Dbxref=NCBI_GP:QIE14501.1;Name=QIE14501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260658.1;locus_tag=IXO1088_002040;product=LysR family transcriptional regulator;protein_id=QIE14501.1;transl_table=11 CP040687.1 Genbank gene 434741 435706 . + . ID=gene-IXO1088_002045;Name=IXO1088_002045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002045 CP040687.1 Protein Homology CDS 434741 435706 . + 0 ID=cds-QIE14502.1;Parent=gene-IXO1088_002045;Dbxref=NCBI_GP:QIE14502.1;Name=QIE14502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_002045;product=IS1595-like element ISXo5 family transposase;protein_id=QIE14502.1;transl_table=11 CP040687.1 Genbank gene 435798 436097 . + . ID=gene-IXO1088_002050;Name=IXO1088_002050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002050 CP040687.1 Protein Homology CDS 435798 436097 . + 0 ID=cds-QIE17831.1;Parent=gene-IXO1088_002050;Dbxref=NCBI_GP:QIE17831.1;Name=QIE17831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443822.1;locus_tag=IXO1088_002050;product=alpha/beta hydrolase;protein_id=QIE17831.1;transl_table=11 CP040687.1 Genbank gene 436209 438716 . + . ID=gene-IXO1088_002055;Name=IXO1088_002055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002055 CP040687.1 Protein Homology CDS 436209 438716 . + 0 ID=cds-QIE14503.1;Parent=gene-IXO1088_002055;Dbxref=NCBI_GP:QIE14503.1;Name=QIE14503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116881.1;locus_tag=IXO1088_002055;product=S9 family peptidase;protein_id=QIE14503.1;transl_table=11 CP040687.1 Genbank gene 438757 438835 . - . ID=gene-IXO1088_002060;Name=IXO1088_002060;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_002060 CP040687.1 cmsearch ncRNA 438757 438835 . - . ID=rna-IXO1088_002060;Parent=gene-IXO1088_002060;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_002060;product=sX9 sRNA CP040687.1 cmsearch exon 438757 438835 . - . ID=exon-IXO1088_002060-1;Parent=rna-IXO1088_002060;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_002060;product=sX9 sRNA CP040687.1 Genbank gene 438895 439353 . - . ID=gene-IXO1088_002065;Name=IXO1088_002065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002065 CP040687.1 Protein Homology CDS 438895 439353 . - 0 ID=cds-QIE14504.1;Parent=gene-IXO1088_002065;Dbxref=NCBI_GP:QIE14504.1;Name=QIE14504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968357.1;locus_tag=IXO1088_002065;product=gas vesicle protein;protein_id=QIE14504.1;transl_table=11 CP040687.1 Genbank gene 439799 440611 . + . ID=gene-IXO1088_002070;Name=IXO1088_002070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002070 CP040687.1 Protein Homology CDS 439799 440611 . + 0 ID=cds-QIE14505.1;Parent=gene-IXO1088_002070;Dbxref=NCBI_GP:QIE14505.1;Name=QIE14505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409682.1;locus_tag=IXO1088_002070;product=hydrolase TatD;protein_id=QIE14505.1;transl_table=11 CP040687.1 Genbank gene 440606 440681 . - . ID=gene-IXO1088_002075;Name=IXO1088_002075;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_002075 CP040687.1 cmsearch ncRNA 440606 440681 . - . ID=rna-IXO1088_002075;Parent=gene-IXO1088_002075;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_002075;product=sX9 sRNA CP040687.1 cmsearch exon 440606 440681 . - . ID=exon-IXO1088_002075-1;Parent=rna-IXO1088_002075;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_002075;product=sX9 sRNA CP040687.1 Genbank gene 440676 440879 . - . ID=gene-IXO1088_002080;Name=IXO1088_002080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002080 CP040687.1 Protein Homology CDS 440676 440879 . - 0 ID=cds-QIE14506.1;Parent=gene-IXO1088_002080;Dbxref=NCBI_GP:QIE14506.1;Name=QIE14506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302127.1;locus_tag=IXO1088_002080;product=hypothetical protein;protein_id=QIE14506.1;transl_table=11 CP040687.1 Genbank gene 441307 441504 . - . ID=gene-IXO1088_002085;Name=IXO1088_002085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002085 CP040687.1 Protein Homology CDS 441307 441504 . - 0 ID=cds-QIE14507.1;Parent=gene-IXO1088_002085;Dbxref=NCBI_GP:QIE14507.1;Name=QIE14507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505090.1;locus_tag=IXO1088_002085;product=hypothetical protein;protein_id=QIE14507.1;transl_table=11 CP040687.1 Genbank gene 441480 442367 . - . ID=gene-IXO1088_002090;Name=IXO1088_002090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002090 CP040687.1 Protein Homology CDS 441480 442367 . - 0 ID=cds-QIE14508.1;Parent=gene-IXO1088_002090;Dbxref=NCBI_GP:QIE14508.1;Name=QIE14508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635696.1;locus_tag=IXO1088_002090;product=LysR family transcriptional regulator;protein_id=QIE14508.1;transl_table=11 CP040687.1 Genbank gene 442383 443744 . + . ID=gene-IXO1088_002095;Name=IXO1088_002095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002095 CP040687.1 Protein Homology CDS 442383 443744 . + 0 ID=cds-QIE14509.1;Parent=gene-IXO1088_002095;Dbxref=NCBI_GP:QIE14509.1;Name=QIE14509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635697.1;locus_tag=IXO1088_002095;product=MFS transporter;protein_id=QIE14509.1;transl_table=11 CP040687.1 Genbank pseudogene 443809 444182 . - . ID=gene-IXO1088_002100;Name=IXO1088_002100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002100;pseudo=true CP040687.1 Protein Homology CDS 443809 444182 . - 0 ID=cds-IXO1088_002100;Parent=gene-IXO1088_002100;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160393.1;locus_tag=IXO1088_002100;product=MerR family transcriptional regulator;pseudo=true;transl_table=11 CP040687.1 Genbank gene 444638 445519 . + . ID=gene-IXO1088_002105;Name=IXO1088_002105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002105 CP040687.1 Protein Homology CDS 444638 445519 . + 0 ID=cds-QIE14510.1;Parent=gene-IXO1088_002105;Dbxref=NCBI_GP:QIE14510.1;Name=QIE14510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920008.1;locus_tag=IXO1088_002105;product=NAD-dependent protein deacetylase;protein_id=QIE14510.1;transl_table=11 CP040687.1 Genbank gene 445599 446696 . + . ID=gene-IXO1088_002110;Name=IXO1088_002110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002110 CP040687.1 Protein Homology CDS 445599 446696 . + 0 ID=cds-QIE14511.1;Parent=gene-IXO1088_002110;Dbxref=NCBI_GP:QIE14511.1;Name=QIE14511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635702.1;locus_tag=IXO1088_002110;product=NADH:flavin oxidoreductase/NADH oxidase;protein_id=QIE14511.1;transl_table=11 CP040687.1 Genbank gene 446734 447612 . + . ID=gene-IXO1088_002115;Name=IXO1088_002115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002115 CP040687.1 Protein Homology CDS 446734 447612 . + 0 ID=cds-QIE14512.1;Parent=gene-IXO1088_002115;Dbxref=NCBI_GP:QIE14512.1;Name=QIE14512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304345.1;locus_tag=IXO1088_002115;product=NAD(P)-dependent oxidoreductase;protein_id=QIE14512.1;transl_table=11 CP040687.1 Genbank gene 447636 447711 . - . ID=gene-IXO1088_002120;Name=IXO1088_002120;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_002120 CP040687.1 cmsearch ncRNA 447636 447711 . - . ID=rna-IXO1088_002120;Parent=gene-IXO1088_002120;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_002120;product=sX9 sRNA CP040687.1 cmsearch exon 447636 447711 . - . ID=exon-IXO1088_002120-1;Parent=rna-IXO1088_002120;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_002120;product=sX9 sRNA CP040687.1 Genbank gene 447695 447768 . + . ID=gene-IXO1088_002125;Name=IXO1088_002125;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_002125 CP040687.1 cmsearch ncRNA 447695 447768 . + . ID=rna-IXO1088_002125;Parent=gene-IXO1088_002125;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_002125;product=sX9 sRNA CP040687.1 cmsearch exon 447695 447768 . + . ID=exon-IXO1088_002125-1;Parent=rna-IXO1088_002125;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_002125;product=sX9 sRNA CP040687.1 Genbank pseudogene 447964 448353 . + . ID=gene-IXO1088_002130;Name=IXO1088_002130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002130;pseudo=true CP040687.1 Protein Homology CDS 447964 448353 . + 0 ID=cds-IXO1088_002130;Parent=gene-IXO1088_002130;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635704.1;locus_tag=IXO1088_002130;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 448557 449426 . + . ID=gene-IXO1088_002135;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=IXO1088_002135 CP040687.1 Protein Homology CDS 448557 449426 . + 0 ID=cds-QIE14513.1;Parent=gene-IXO1088_002135;Dbxref=NCBI_GP:QIE14513.1;Name=QIE14513.1;gbkey=CDS;gene=purU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635705.1;locus_tag=IXO1088_002135;product=formyltetrahydrofolate deformylase;protein_id=QIE14513.1;transl_table=11 CP040687.1 Genbank gene 449505 450212 . - . ID=gene-IXO1088_002140;Name=IXO1088_002140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002140 CP040687.1 Protein Homology CDS 449505 450212 . - 0 ID=cds-QIE14514.1;Parent=gene-IXO1088_002140;Dbxref=NCBI_GP:QIE14514.1;Name=QIE14514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160394.1;locus_tag=IXO1088_002140;product=response regulator;protein_id=QIE14514.1;transl_table=11 CP040687.1 Genbank pseudogene 450245 450876 . - . ID=gene-IXO1088_002145;Name=IXO1088_002145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002145;pseudo=true CP040687.1 Protein Homology CDS 450245 450876 . - 0 ID=cds-IXO1088_002145;Parent=gene-IXO1088_002145;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346030.1;locus_tag=IXO1088_002145;product=two-component sensor histidine kinase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 450902 451786 . - . ID=gene-IXO1088_002150;Name=IXO1088_002150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002150 CP040687.1 Protein Homology CDS 450902 451786 . - 0 ID=cds-QIE17832.1;Parent=gene-IXO1088_002150;Dbxref=NCBI_GP:QIE17832.1;Name=QIE17832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849367.1;locus_tag=IXO1088_002150;product=methylenetetrahydrofolate reductase;protein_id=QIE17832.1;transl_table=11 CP040687.1 Genbank gene 451975 452051 . + . ID=gene-IXO1088_002155;Name=IXO1088_002155;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_002155 CP040687.1 cmsearch ncRNA 451975 452051 . + . ID=rna-IXO1088_002155;Parent=gene-IXO1088_002155;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_002155;product=sX9 sRNA CP040687.1 cmsearch exon 451975 452051 . + . ID=exon-IXO1088_002155-1;Parent=rna-IXO1088_002155;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_002155;product=sX9 sRNA CP040687.1 Genbank gene 452056 452721 . - . ID=gene-IXO1088_002160;Name=IXO1088_002160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002160 CP040687.1 Protein Homology CDS 452056 452721 . - 0 ID=cds-QIE14515.1;Parent=gene-IXO1088_002160;Dbxref=NCBI_GP:QIE14515.1;Name=QIE14515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346036.1;locus_tag=IXO1088_002160;product=epoxyqueuosine reductase QueH;protein_id=QIE14515.1;transl_table=11 CP040687.1 Genbank gene 452721 453635 . - . ID=gene-IXO1088_002165;Name=IXO1088_002165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002165 CP040687.1 Protein Homology CDS 452721 453635 . - 0 ID=cds-QIE14516.1;Parent=gene-IXO1088_002165;Dbxref=NCBI_GP:QIE14516.1;Name=QIE14516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089083.1;locus_tag=IXO1088_002165;product=LysR family transcriptional regulator;protein_id=QIE14516.1;transl_table=11 CP040687.1 Genbank gene 453838 454419 . + . ID=gene-IXO1088_002170;Name=msuE;gbkey=Gene;gene=msuE;gene_biotype=protein_coding;locus_tag=IXO1088_002170 CP040687.1 Protein Homology CDS 453838 454419 . + 0 ID=cds-QIE14517.1;Parent=gene-IXO1088_002170;Dbxref=NCBI_GP:QIE14517.1;Name=QIE14517.1;gbkey=CDS;gene=msuE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635711.1;locus_tag=IXO1088_002170;product=FMN reductase;protein_id=QIE14517.1;transl_table=11 CP040687.1 Genbank gene 454562 455545 . + . ID=gene-IXO1088_002175;Name=IXO1088_002175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002175 CP040687.1 Protein Homology CDS 454562 455545 . + 0 ID=cds-QIE14518.1;Parent=gene-IXO1088_002175;Dbxref=NCBI_GP:QIE14518.1;Name=QIE14518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409672.1;locus_tag=IXO1088_002175;product=DUF1852 domain-containing protein;protein_id=QIE14518.1;transl_table=11 CP040687.1 Genbank gene 455573 456601 . + . ID=gene-IXO1088_002180;Name=IXO1088_002180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002180 CP040687.1 Protein Homology CDS 455573 456601 . + 0 ID=cds-QIE14519.1;Parent=gene-IXO1088_002180;Dbxref=NCBI_GP:QIE14519.1;Name=QIE14519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635713.1;locus_tag=IXO1088_002180;product=methionine synthase;protein_id=QIE14519.1;transl_table=11 CP040687.1 Genbank gene 456808 457764 . - . ID=gene-IXO1088_002185;Name=IXO1088_002185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002185 CP040687.1 Protein Homology CDS 456808 457764 . - 0 ID=cds-QIE14520.1;Parent=gene-IXO1088_002185;Dbxref=NCBI_GP:QIE14520.1;Name=QIE14520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260636.1;locus_tag=IXO1088_002185;product=2-keto-3-deoxygluconate permease;protein_id=QIE14520.1;transl_table=11 CP040687.1 Genbank pseudogene 457913 459365 . - . ID=gene-IXO1088_002190;Name=IXO1088_002190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002190;pseudo=true CP040687.1 Protein Homology CDS 457913 459365 . - 0 ID=cds-IXO1088_002190;Parent=gene-IXO1088_002190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635715.1;locus_tag=IXO1088_002190;product=porin;pseudo=true;transl_table=11 CP040687.1 Genbank gene 460188 461066 . - . ID=gene-IXO1088_002195;Name=IXO1088_002195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002195 CP040687.1 Protein Homology CDS 460188 461066 . - 0 ID=cds-QIE14521.1;Parent=gene-IXO1088_002195;Dbxref=NCBI_GP:QIE14521.1;Name=QIE14521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409669.1;locus_tag=IXO1088_002195;product=SDR family oxidoreductase;protein_id=QIE14521.1;transl_table=11 CP040687.1 Genbank gene 461202 461633 . + . ID=gene-IXO1088_002200;Name=IXO1088_002200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002200 CP040687.1 Protein Homology CDS 461202 461633 . + 0 ID=cds-QIE14522.1;Parent=gene-IXO1088_002200;Dbxref=NCBI_GP:QIE14522.1;Name=QIE14522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505072.1;locus_tag=IXO1088_002200;product=helix-turn-helix transcriptional regulator;protein_id=QIE14522.1;transl_table=11 CP040687.1 Genbank gene 461851 462312 . - . ID=gene-IXO1088_002205;Name=IXO1088_002205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002205 CP040687.1 Protein Homology CDS 461851 462312 . - 0 ID=cds-QIE14523.1;Parent=gene-IXO1088_002205;Dbxref=NCBI_GP:QIE14523.1;Name=QIE14523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004153220.1;locus_tag=IXO1088_002205;product=isoprenylcysteine carboxylmethyltransferase family protein;protein_id=QIE14523.1;transl_table=11 CP040687.1 Genbank gene 462390 462683 . - . ID=gene-IXO1088_002210;Name=IXO1088_002210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002210 CP040687.1 Protein Homology CDS 462390 462683 . - 0 ID=cds-QIE14524.1;Parent=gene-IXO1088_002210;Dbxref=NCBI_GP:QIE14524.1;Name=QIE14524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300601.1;locus_tag=IXO1088_002210;product=hypothetical protein;protein_id=QIE14524.1;transl_table=11 CP040687.1 Genbank gene 462727 463320 . - . ID=gene-IXO1088_002215;Name=IXO1088_002215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002215 CP040687.1 Protein Homology CDS 462727 463320 . - 0 ID=cds-QIE14525.1;Parent=gene-IXO1088_002215;Dbxref=NCBI_GP:QIE14525.1;Name=QIE14525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260633.1;locus_tag=IXO1088_002215;product=hypothetical protein;protein_id=QIE14525.1;transl_table=11 CP040687.1 Genbank gene 463317 464036 . - . ID=gene-IXO1088_002220;Name=IXO1088_002220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002220 CP040687.1 Protein Homology CDS 463317 464036 . - 0 ID=cds-QIE14526.1;Parent=gene-IXO1088_002220;Dbxref=NCBI_GP:QIE14526.1;Name=QIE14526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162653.1;locus_tag=IXO1088_002220;product=hypothetical protein;protein_id=QIE14526.1;transl_table=11 CP040687.1 Genbank gene 464321 464397 . + . ID=gene-IXO1088_002225;Name=IXO1088_002225;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_002225 CP040687.1 cmsearch ncRNA 464321 464397 . + . ID=rna-IXO1088_002225;Parent=gene-IXO1088_002225;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_002225;product=sX9 sRNA CP040687.1 cmsearch exon 464321 464397 . + . ID=exon-IXO1088_002225-1;Parent=rna-IXO1088_002225;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_002225;product=sX9 sRNA CP040687.1 Genbank gene 464481 466841 . - . ID=gene-IXO1088_002230;Name=IXO1088_002230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002230 CP040687.1 Protein Homology CDS 464481 466841 . - 0 ID=cds-QIE17833.1;Parent=gene-IXO1088_002230;Dbxref=NCBI_GP:QIE17833.1;Name=QIE17833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809629.1;locus_tag=IXO1088_002230;product=S9 family peptidase;protein_id=QIE17833.1;transl_table=11 CP040687.1 Genbank pseudogene 466886 467198 . - . ID=gene-IXO1088_002235;Name=IXO1088_002235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002235;pseudo=true CP040687.1 Protein Homology CDS 466886 467198 . - 0 ID=cds-IXO1088_002235;Parent=gene-IXO1088_002235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005926453.1;locus_tag=IXO1088_002235;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 467623 468933 . + . ID=gene-IXO1088_002240;Name=IXO1088_002240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002240 CP040687.1 Protein Homology CDS 467623 468933 . + 0 ID=cds-QIE17834.1;Parent=gene-IXO1088_002240;Dbxref=NCBI_GP:QIE17834.1;Name=QIE17834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381434.1;locus_tag=IXO1088_002240;product=acyl-CoA synthetase;protein_id=QIE17834.1;transl_table=11 CP040687.1 Genbank gene 469386 470345 . + . ID=gene-IXO1088_002245;Name=IXO1088_002245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002245 CP040687.1 Protein Homology CDS 469386 470345 . + 0 ID=cds-QIE14527.1;Parent=gene-IXO1088_002245;Dbxref=NCBI_GP:QIE14527.1;Name=QIE14527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501625.1;locus_tag=IXO1088_002245;product=5'-nucleotidase;protein_id=QIE14527.1;transl_table=11 CP040687.1 Genbank gene 470588 471481 . - . ID=gene-IXO1088_002250;Name=IXO1088_002250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002250 CP040687.1 Protein Homology CDS 470588 471481 . - 0 ID=cds-QIE17836.1;Parent=gene-IXO1088_002250;Dbxref=NCBI_GP:QIE17836.1;Name=QIE17836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639353.2;locus_tag=IXO1088_002250;product=pteridine-dependent deoxygenase;protein_id=QIE17836.1;transl_table=11 CP040687.1 Genbank gene 471592 472941 . - . ID=gene-IXO1088_002255;Name=IXO1088_002255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002255 CP040687.1 Protein Homology CDS 471592 472941 . - 0 ID=cds-QIE17835.1;Parent=gene-IXO1088_002255;Dbxref=NCBI_GP:QIE17835.1;Name=QIE17835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117708.1;locus_tag=IXO1088_002255;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=QIE17835.1;transl_table=11 CP040687.1 Genbank gene 473244 473513 . + . ID=gene-IXO1088_002260;Name=IXO1088_002260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002260 CP040687.1 Protein Homology CDS 473244 473513 . + 0 ID=cds-QIE14528.1;Parent=gene-IXO1088_002260;Dbxref=NCBI_GP:QIE14528.1;Name=QIE14528.1;Note=Involved in the biosynthetic pathways of fatty acids%2C phospholipids%2C lipopolysaccharides%2C and oligosaccharides;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300738.1;locus_tag=IXO1088_002260;product=acyl carrier protein;protein_id=QIE14528.1;transl_table=11 CP040687.1 Genbank gene 473488 474234 . + . ID=gene-IXO1088_002265;Name=IXO1088_002265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002265 CP040687.1 Protein Homology CDS 473488 474234 . + 0 ID=cds-QIE14529.1;Parent=gene-IXO1088_002265;Dbxref=NCBI_GP:QIE14529.1;Name=QIE14529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639350.1;locus_tag=IXO1088_002265;product=ketosynthase;protein_id=QIE14529.1;transl_table=11 CP040687.1 Genbank gene 474288 475037 . + . ID=gene-IXO1088_002270;Name=IXO1088_002270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002270 CP040687.1 Protein Homology CDS 474288 475037 . + 0 ID=cds-QIE17837.1;Parent=gene-IXO1088_002270;Dbxref=NCBI_GP:QIE17837.1;Name=QIE17837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639349.1;locus_tag=IXO1088_002270;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=QIE17837.1;transl_table=11 CP040687.1 Genbank gene 475049 475336 . + . ID=gene-IXO1088_002275;Name=IXO1088_002275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002275 CP040687.1 Protein Homology CDS 475049 475336 . + 0 ID=cds-QIE14530.1;Parent=gene-IXO1088_002275;Dbxref=NCBI_GP:QIE14530.1;Name=QIE14530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260624.1;locus_tag=IXO1088_002275;product=hypothetical protein;protein_id=QIE14530.1;transl_table=11 CP040687.1 Genbank gene 475333 476307 . + . ID=gene-IXO1088_002280;Name=IXO1088_002280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002280 CP040687.1 Protein Homology CDS 475333 476307 . + 0 ID=cds-QIE14531.1;Parent=gene-IXO1088_002280;Dbxref=NCBI_GP:QIE14531.1;Name=QIE14531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639347.1;locus_tag=IXO1088_002280;product=acyltransferase;protein_id=QIE14531.1;transl_table=11 CP040687.1 Genbank gene 476231 476878 . + . ID=gene-IXO1088_002285;Name=IXO1088_002285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002285 CP040687.1 Protein Homology CDS 476231 476878 . + 0 ID=cds-QIE14532.1;Parent=gene-IXO1088_002285;Dbxref=NCBI_GP:QIE14532.1;Name=QIE14532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639346.1;locus_tag=IXO1088_002285;product=fatty acyl CoA synthetase;protein_id=QIE14532.1;transl_table=11 CP040687.1 Genbank gene 477017 479386 . + . ID=gene-IXO1088_002290;Name=IXO1088_002290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002290 CP040687.1 Protein Homology CDS 477017 479386 . + 0 ID=cds-QIE14533.1;Parent=gene-IXO1088_002290;Dbxref=NCBI_GP:QIE14533.1;Name=QIE14533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005926484.1;locus_tag=IXO1088_002290;product=hypothetical protein;protein_id=QIE14533.1;transl_table=11 CP040687.1 Genbank gene 479373 479810 . + . ID=gene-IXO1088_002295;Name=IXO1088_002295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002295 CP040687.1 Protein Homology CDS 479373 479810 . + 0 ID=cds-QIE14534.1;Parent=gene-IXO1088_002295;Dbxref=NCBI_GP:QIE14534.1;Name=QIE14534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639343.1;locus_tag=IXO1088_002295;product=phosphotransferase;protein_id=QIE14534.1;transl_table=11 CP040687.1 Genbank gene 479925 480001 . + . ID=gene-IXO1088_002300;Name=IXO1088_002300;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_002300 CP040687.1 cmsearch ncRNA 479925 480001 . + . ID=rna-IXO1088_002300;Parent=gene-IXO1088_002300;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_002300;product=sX9 sRNA CP040687.1 cmsearch exon 479925 480001 . + . ID=exon-IXO1088_002300-1;Parent=rna-IXO1088_002300;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_002300;product=sX9 sRNA CP040687.1 Genbank pseudogene 480064 481096 . + . ID=gene-IXO1088_002305;Name=IXO1088_002305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002305;pseudo=true CP040687.1 Protein Homology CDS 480064 481096 . + 0 ID=cds-IXO1088_002305;Parent=gene-IXO1088_002305;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259143.1;locus_tag=IXO1088_002305;product=IS630 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 481146 485003 . - . ID=gene-IXO1088_002310;Name=IXO1088_002310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002310 CP040687.1 Protein Homology CDS 481146 485003 . - 0 ID=cds-QIE14535.1;Parent=gene-IXO1088_002310;Dbxref=NCBI_GP:QIE14535.1;Name=QIE14535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639423.2;locus_tag=IXO1088_002310;product=translocation/assembly module TamB;protein_id=QIE14535.1;transl_table=11 CP040687.1 Genbank gene 485000 486781 . - . ID=gene-IXO1088_002315;Name=IXO1088_002315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002315 CP040687.1 Protein Homology CDS 485000 486781 . - 0 ID=cds-QIE14536.1;Parent=gene-IXO1088_002315;Dbxref=NCBI_GP:QIE14536.1;Name=QIE14536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349065.1;locus_tag=IXO1088_002315;product=outer membrane protein assembly factor;protein_id=QIE14536.1;transl_table=11 CP040687.1 Genbank pseudogene 486870 487007 . + . ID=gene-IXO1088_002320;Name=IXO1088_002320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002320;pseudo=true CP040687.1 Protein Homology CDS 486870 487007 . + 0 ID=cds-IXO1088_002320;Parent=gene-IXO1088_002320;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_002320;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 487074 488173 . + . ID=gene-IXO1088_002325;Name=IXO1088_002325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002325;pseudo=true CP040687.1 Protein Homology CDS 487074 488173 . + 0 ID=cds-IXO1088_002325;Parent=gene-IXO1088_002325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1088_002325;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 488396 490285 . - . ID=gene-IXO1088_002330;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=IXO1088_002330 CP040687.1 Protein Homology CDS 488396 490285 . - 0 ID=cds-QIE14537.1;Parent=gene-IXO1088_002330;Dbxref=NCBI_GP:QIE14537.1;Name=QIE14537.1;gbkey=CDS;gene=rho;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171708.1;locus_tag=IXO1088_002330;product=transcription termination factor Rho;protein_id=QIE14537.1;transl_table=11 CP040687.1 Genbank gene 490502 490843 . - . ID=gene-IXO1088_002335;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=IXO1088_002335 CP040687.1 Protein Homology CDS 490502 490843 . - 0 ID=cds-QIE14538.1;Parent=gene-IXO1088_002335;Dbxref=NCBI_GP:QIE14538.1;Name=QIE14538.1;gbkey=CDS;gene=trxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639122.1;locus_tag=IXO1088_002335;product=thioredoxin TrxA;protein_id=QIE14538.1;transl_table=11 CP040687.1 Genbank gene 491042 492766 . + . ID=gene-IXO1088_002340;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=IXO1088_002340 CP040687.1 Protein Homology CDS 491042 492766 . + 0 ID=cds-QIE14539.1;Parent=gene-IXO1088_002340;Dbxref=NCBI_GP:QIE14539.1;Name=QIE14539.1;gbkey=CDS;gene=rhlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639121.1;locus_tag=IXO1088_002340;product=ATP-dependent RNA helicase RhlB;protein_id=QIE14539.1;transl_table=11 CP040687.1 Genbank gene 492842 493528 . + . ID=gene-IXO1088_002345;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=IXO1088_002345 CP040687.1 Protein Homology CDS 492842 493528 . + 0 ID=cds-QIE14540.1;Parent=gene-IXO1088_002345;Dbxref=NCBI_GP:QIE14540.1;Name=QIE14540.1;gbkey=CDS;gene=ftsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639120.1;locus_tag=IXO1088_002345;product=cell division ATP-binding protein FtsE;protein_id=QIE14540.1;transl_table=11 CP040687.1 Genbank gene 493525 494475 . + . ID=gene-IXO1088_002350;Name=IXO1088_002350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002350 CP040687.1 Protein Homology CDS 493525 494475 . + 0 ID=cds-QIE14541.1;Parent=gene-IXO1088_002350;Dbxref=NCBI_GP:QIE14541.1;Name=QIE14541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639119.1;locus_tag=IXO1088_002350;product=ABC transporter permease;protein_id=QIE14541.1;transl_table=11 CP040687.1 Genbank gene 494532 495326 . + . ID=gene-IXO1088_002355;Name=IXO1088_002355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002355 CP040687.1 Protein Homology CDS 494532 495326 . + 0 ID=cds-QIE17838.1;Parent=gene-IXO1088_002355;Dbxref=NCBI_GP:QIE17838.1;Name=QIE17838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639118.1;locus_tag=IXO1088_002355;product=response regulator;protein_id=QIE17838.1;transl_table=11 CP040687.1 Genbank gene 495323 496048 . + . ID=gene-IXO1088_002360;Name=IXO1088_002360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002360 CP040687.1 Protein Homology CDS 495323 496048 . + 0 ID=cds-QIE14542.1;Parent=gene-IXO1088_002360;Dbxref=NCBI_GP:QIE14542.1;Name=QIE14542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971317.1;locus_tag=IXO1088_002360;product=uracil-DNA glycosylase;protein_id=QIE14542.1;transl_table=11 CP040687.1 Genbank gene 496247 497122 . + . ID=gene-IXO1088_002365;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=IXO1088_002365 CP040687.1 Protein Homology CDS 496247 497122 . + 0 ID=cds-QIE14543.1;Parent=gene-IXO1088_002365;Dbxref=NCBI_GP:QIE14543.1;Name=QIE14543.1;gbkey=CDS;gene=rpoH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639116.1;locus_tag=IXO1088_002365;product=RNA polymerase sigma factor RpoH;protein_id=QIE14543.1;transl_table=11 CP040687.1 Genbank pseudogene 497204 497816 . - . ID=gene-IXO1088_002370;Name=IXO1088_002370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002370;pseudo=true CP040687.1 Protein Homology CDS 497204 497816 . - 0 ID=cds-IXO1088_002370;Parent=gene-IXO1088_002370;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639115.1;locus_tag=IXO1088_002370;product=trimeric intracellular cation channel family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 497866 499158 . - . ID=gene-IXO1088_002375;Name=IXO1088_002375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002375 CP040687.1 Protein Homology CDS 497866 499158 . - 0 ID=cds-QIE14544.1;Parent=gene-IXO1088_002375;Dbxref=NCBI_GP:QIE14544.1;Name=QIE14544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639114.1;locus_tag=IXO1088_002375;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=QIE14544.1;transl_table=11 CP040687.1 Genbank gene 499516 499815 . + . ID=gene-IXO1088_002380;Name=IXO1088_002380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002380 CP040687.1 Protein Homology CDS 499516 499815 . + 0 ID=cds-QIE14545.1;Parent=gene-IXO1088_002380;Dbxref=NCBI_GP:QIE14545.1;Name=QIE14545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260606.1;locus_tag=IXO1088_002380;product=hypothetical protein;protein_id=QIE14545.1;transl_table=11 CP040687.1 Genbank pseudogene 499812 500642 . + . ID=gene-IXO1088_002385;Name=IXO1088_002385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002385;pseudo=true CP040687.1 Protein Homology CDS 499812 500642 . + 0 ID=cds-IXO1088_002385;Parent=gene-IXO1088_002385;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157037.1;locus_tag=IXO1088_002385;product=NYN domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 500701 501293 . + . ID=gene-IXO1088_002390;Name=IXO1088_002390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002390;pseudo=true CP040687.1 Protein Homology CDS 500701 501293 . + 0 ID=cds-IXO1088_002390;Parent=gene-IXO1088_002390;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1088_002390;product=IS4 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 501691 501978 . + . ID=gene-IXO1088_002395;Name=IXO1088_002395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002395 CP040687.1 Protein Homology CDS 501691 501978 . + 0 ID=cds-QIE14546.1;Parent=gene-IXO1088_002395;Dbxref=NCBI_GP:QIE14546.1;Name=QIE14546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635914.1;locus_tag=IXO1088_002395;product=co-chaperone GroES;protein_id=QIE14546.1;transl_table=11 CP040687.1 Genbank gene 502115 503755 . + . ID=gene-IXO1088_002400;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=IXO1088_002400 CP040687.1 Protein Homology CDS 502115 503755 . + 0 ID=cds-QIE14547.1;Parent=gene-IXO1088_002400;Dbxref=NCBI_GP:QIE14547.1;Name=QIE14547.1;gbkey=CDS;gene=groL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635915.1;locus_tag=IXO1088_002400;product=chaperonin GroEL;protein_id=QIE14547.1;transl_table=11 CP040687.1 Genbank gene 504056 506164 . - . ID=gene-IXO1088_002405;Name=IXO1088_002405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002405 CP040687.1 Protein Homology CDS 504056 506164 . - 0 ID=cds-QIE14548.1;Parent=gene-IXO1088_002405;Dbxref=NCBI_GP:QIE14548.1;Name=QIE14548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260601.1;locus_tag=IXO1088_002405;product=type III secretion system effector protein;protein_id=QIE14548.1;transl_table=11 CP040687.1 Genbank gene 506510 507445 . + . ID=gene-IXO1088_002410;Name=IXO1088_002410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002410 CP040687.1 Protein Homology CDS 506510 507445 . + 0 ID=cds-QIE14549.1;Parent=gene-IXO1088_002410;Dbxref=NCBI_GP:QIE14549.1;Name=QIE14549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409647.1;locus_tag=IXO1088_002410;product=TonB-dependent receptor;protein_id=QIE14549.1;transl_table=11 CP040687.1 Genbank gene 507569 509167 . + . ID=gene-IXO1088_002415;Name=IXO1088_002415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002415 CP040687.1 GeneMarkS-2+ CDS 507569 509167 . + 0 ID=cds-QIE14550.1;Parent=gene-IXO1088_002415;Dbxref=NCBI_GP:QIE14550.1;Name=QIE14550.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_002415;product=TonB-dependent receptor;protein_id=QIE14550.1;transl_table=11 CP040687.1 Genbank gene 509334 509410 . - . ID=gene-IXO1088_002420;Name=IXO1088_002420;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_002420 CP040687.1 cmsearch ncRNA 509334 509410 . - . ID=rna-IXO1088_002420;Parent=gene-IXO1088_002420;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_002420;product=sX9 sRNA CP040687.1 cmsearch exon 509334 509410 . - . ID=exon-IXO1088_002420-1;Parent=rna-IXO1088_002420;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_002420;product=sX9 sRNA CP040687.1 Genbank gene 510205 511278 . + . ID=gene-IXO1088_002425;Name=IXO1088_002425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002425 CP040687.1 Protein Homology CDS 510205 511278 . + 0 ID=cds-QIE14551.1;Parent=gene-IXO1088_002425;Dbxref=NCBI_GP:QIE14551.1;Name=QIE14551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638933.1;locus_tag=IXO1088_002425;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=QIE14551.1;transl_table=11 CP040687.1 Genbank gene 511311 511520 . + . ID=gene-IXO1088_002430;Name=IXO1088_002430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002430 CP040687.1 GeneMarkS-2+ CDS 511311 511520 . + 0 ID=cds-QIE14552.1;Parent=gene-IXO1088_002430;Dbxref=NCBI_GP:QIE14552.1;Name=QIE14552.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_002430;product=hypothetical protein;protein_id=QIE14552.1;transl_table=11 CP040687.1 Genbank gene 511920 512210 . + . ID=gene-IXO1088_002435;Name=IXO1088_002435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002435 CP040687.1 GeneMarkS-2+ CDS 511920 512210 . + 0 ID=cds-QIE14553.1;Parent=gene-IXO1088_002435;Dbxref=NCBI_GP:QIE14553.1;Name=QIE14553.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_002435;product=hypothetical protein;protein_id=QIE14553.1;transl_table=11 CP040687.1 Genbank gene 512183 513247 . + . ID=gene-IXO1088_002440;Name=IXO1088_002440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002440 CP040687.1 Protein Homology CDS 512183 513247 . + 0 ID=cds-QIE14554.1;Parent=gene-IXO1088_002440;Dbxref=NCBI_GP:QIE14554.1;Name=QIE14554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260597.1;locus_tag=IXO1088_002440;product=hypothetical protein;protein_id=QIE14554.1;transl_table=11 CP040687.1 Genbank pseudogene 513248 514213 . - . ID=gene-IXO1088_002445;Name=IXO1088_002445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002445;pseudo=true CP040687.1 Protein Homology CDS 513248 514213 . - 0 ID=cds-IXO1088_002445;Parent=gene-IXO1088_002445;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_002445;product=IS1595 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 514302 515108 . + . ID=gene-IXO1088_002450;Name=IXO1088_002450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002450;pseudo=true CP040687.1 Protein Homology CDS 514302 515108 . + 0 ID=cds-IXO1088_002450;Parent=gene-IXO1088_002450;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155919.1;locus_tag=IXO1088_002450;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 515202 515783 . + . ID=gene-IXO1088_002455;Name=IXO1088_002455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002455 CP040687.1 Protein Homology CDS 515202 515783 . + 0 ID=cds-QIE17839.1;Parent=gene-IXO1088_002455;Dbxref=NCBI_GP:QIE17839.1;Name=QIE17839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409643.1;locus_tag=IXO1088_002455;product=hypothetical protein;protein_id=QIE17839.1;transl_table=11 CP040687.1 Genbank gene 515880 516071 . + . ID=gene-IXO1088_002460;Name=IXO1088_002460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002460 CP040687.1 GeneMarkS-2+ CDS 515880 516071 . + 0 ID=cds-QIE14555.1;Parent=gene-IXO1088_002460;Dbxref=NCBI_GP:QIE14555.1;Name=QIE14555.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_002460;product=hypothetical protein;protein_id=QIE14555.1;transl_table=11 CP040687.1 Genbank gene 516081 516704 . + . ID=gene-IXO1088_002465;Name=IXO1088_002465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002465 CP040687.1 Protein Homology CDS 516081 516704 . + 0 ID=cds-QIE14556.1;Parent=gene-IXO1088_002465;Dbxref=NCBI_GP:QIE14556.1;Name=QIE14556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260591.1;locus_tag=IXO1088_002465;product=hypothetical protein;protein_id=QIE14556.1;transl_table=11 CP040687.1 Genbank gene 517133 518053 . - . ID=gene-IXO1088_002470;Name=IXO1088_002470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002470 CP040687.1 Protein Homology CDS 517133 518053 . - 0 ID=cds-QIE14557.1;Parent=gene-IXO1088_002470;Dbxref=NCBI_GP:QIE14557.1;Name=QIE14557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371804.1;locus_tag=IXO1088_002470;product=SMP-30/gluconolactonase/LRE family protein;protein_id=QIE14557.1;transl_table=11 CP040687.1 Genbank gene 518053 518571 . - . ID=gene-IXO1088_002475;Name=IXO1088_002475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002475 CP040687.1 Protein Homology CDS 518053 518571 . - 0 ID=cds-QIE14558.1;Parent=gene-IXO1088_002475;Dbxref=NCBI_GP:QIE14558.1;Name=QIE14558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005929373.1;locus_tag=IXO1088_002475;product=hypothetical protein;protein_id=QIE14558.1;transl_table=11 CP040687.1 Genbank gene 518733 521558 . + . ID=gene-IXO1088_002480;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=IXO1088_002480 CP040687.1 Protein Homology CDS 518733 521558 . + 0 ID=cds-QIE14559.1;Parent=gene-IXO1088_002480;Dbxref=NCBI_GP:QIE14559.1;Name=QIE14559.1;gbkey=CDS;gene=glnE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005929375.1;locus_tag=IXO1088_002480;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=QIE14559.1;transl_table=11 CP040687.1 Genbank gene 521654 522214 . - . ID=gene-IXO1088_002485;Name=IXO1088_002485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002485 CP040687.1 Protein Homology CDS 521654 522214 . - 0 ID=cds-QIE14560.1;Parent=gene-IXO1088_002485;Dbxref=NCBI_GP:QIE14560.1;Name=QIE14560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409640.1;locus_tag=IXO1088_002485;product=VUT family protein;protein_id=QIE14560.1;transl_table=11 CP040687.1 Genbank gene 522927 523049 . + . ID=gene-IXO1088_002490;Name=IXO1088_002490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002490 CP040687.1 Protein Homology CDS 522927 523049 . + 0 ID=cds-QIE17840.1;Parent=gene-IXO1088_002490;Dbxref=NCBI_GP:QIE17840.1;Name=QIE17840.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03633.13;locus_tag=IXO1088_002490;product=hypothetical protein;protein_id=QIE17840.1;transl_table=11 CP040687.1 Genbank pseudogene 523557 525413 . + . ID=gene-IXO1088_002495;Name=IXO1088_002495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002495;pseudo=true CP040687.1 Protein Homology CDS 523557 525413 . + 0 ID=cds-IXO1088_002495;Parent=gene-IXO1088_002495;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371775.1;locus_tag=IXO1088_002495;product=peptidase S53;pseudo=true;transl_table=11 CP040687.1 Genbank gene 525522 526022 . - . ID=gene-IXO1088_002500;Name=IXO1088_002500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002500 CP040687.1 Protein Homology CDS 525522 526022 . - 0 ID=cds-QIE14561.1;Parent=gene-IXO1088_002500;Dbxref=NCBI_GP:QIE14561.1;Name=QIE14561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409636.1;locus_tag=IXO1088_002500;product=hypothetical protein;protein_id=QIE14561.1;transl_table=11 CP040687.1 Genbank pseudogene 526019 526886 . - . ID=gene-IXO1088_002505;Name=IXO1088_002505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002505;pseudo=true CP040687.1 Protein Homology CDS 526019 526886 . - 0 ID=cds-IXO1088_002505;Parent=gene-IXO1088_002505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089236.1;locus_tag=IXO1088_002505;product=DUF2145 domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 526929 527876 . - . ID=gene-IXO1088_002510;Name=IXO1088_002510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002510 CP040687.1 Protein Homology CDS 526929 527876 . - 0 ID=cds-QIE14562.1;Parent=gene-IXO1088_002510;Dbxref=NCBI_GP:QIE14562.1;Name=QIE14562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260582.1;locus_tag=IXO1088_002510;product=nucleoside-diphosphate sugar epimerase;protein_id=QIE14562.1;transl_table=11 CP040687.1 Genbank gene 528010 528600 . + . ID=gene-IXO1088_002515;Name=IXO1088_002515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002515 CP040687.1 Protein Homology CDS 528010 528600 . + 0 ID=cds-QIE14563.1;Parent=gene-IXO1088_002515;Dbxref=NCBI_GP:QIE14563.1;Name=QIE14563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914114.1;locus_tag=IXO1088_002515;product=malonic semialdehyde reductase;protein_id=QIE14563.1;transl_table=11 CP040687.1 Genbank gene 528811 529563 . + . ID=gene-IXO1088_002520;Name=IXO1088_002520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002520 CP040687.1 Protein Homology CDS 528811 529563 . + 0 ID=cds-QIE14564.1;Parent=gene-IXO1088_002520;Dbxref=NCBI_GP:QIE14564.1;Name=QIE14564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409632.1;locus_tag=IXO1088_002520;product=polyisoprenoid-binding protein;protein_id=QIE14564.1;transl_table=11 CP040687.1 Genbank pseudogene 529785 529954 . - . ID=gene-IXO1088_002525;Name=IXO1088_002525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002525;pseudo=true CP040687.1 Protein Homology CDS 529785 529954 . - 0 ID=cds-IXO1088_002525;Parent=gene-IXO1088_002525;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638964.1;locus_tag=IXO1088_002525;product=HAD family hydrolase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 530049 530468 . - . ID=gene-IXO1088_002530;Name=IXO1088_002530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002530 CP040687.1 Protein Homology CDS 530049 530468 . - 0 ID=cds-QIE14565.1;Parent=gene-IXO1088_002530;Dbxref=NCBI_GP:QIE14565.1;Name=QIE14565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483275.1;locus_tag=IXO1088_002530;product=STAS domain-containing protein;protein_id=QIE14565.1;transl_table=11 CP040687.1 Genbank gene 530465 530896 . - . ID=gene-IXO1088_002535;Name=IXO1088_002535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002535 CP040687.1 Protein Homology CDS 530465 530896 . - 0 ID=cds-QIE14566.1;Parent=gene-IXO1088_002535;Dbxref=NCBI_GP:QIE14566.1;Name=QIE14566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917392.1;locus_tag=IXO1088_002535;product=ATP-binding protein;protein_id=QIE14566.1;transl_table=11 CP040687.1 Genbank gene 530893 532899 . - . ID=gene-IXO1088_002540;Name=IXO1088_002540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002540 CP040687.1 Protein Homology CDS 530893 532899 . - 0 ID=cds-QIE14567.1;Parent=gene-IXO1088_002540;Dbxref=NCBI_GP:QIE14567.1;Name=QIE14567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260578.1;locus_tag=IXO1088_002540;product=HAMP domain-containing protein;protein_id=QIE14567.1;transl_table=11 CP040687.1 Genbank gene 533117 533464 . + . ID=gene-IXO1088_002545;Name=IXO1088_002545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002545 CP040687.1 GeneMarkS-2+ CDS 533117 533464 . + 0 ID=cds-QIE14568.1;Parent=gene-IXO1088_002545;Dbxref=NCBI_GP:QIE14568.1;Name=QIE14568.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_002545;product=hypothetical protein;protein_id=QIE14568.1;transl_table=11 CP040687.1 Genbank gene 533973 534485 . + . ID=gene-IXO1088_002550;Name=IXO1088_002550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002550 CP040687.1 Protein Homology CDS 533973 534485 . + 0 ID=cds-QIE14569.1;Parent=gene-IXO1088_002550;Dbxref=NCBI_GP:QIE14569.1;Name=QIE14569.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13276.4;locus_tag=IXO1088_002550;product=hypothetical protein;protein_id=QIE14569.1;transl_table=11 CP040687.1 Genbank pseudogene 534444 535820 . - . ID=gene-IXO1088_002555;Name=IXO1088_002555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002555;pseudo=true CP040687.1 Protein Homology CDS 534444 535820 . - 0 ID=cds-IXO1088_002555;Parent=gene-IXO1088_002555;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1088_002555;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 536174 540103 . - . ID=gene-IXO1088_002560;Name=IXO1088_002560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002560 CP040687.1 Protein Homology CDS 536174 540103 . - 0 ID=cds-QIE14570.1;Parent=gene-IXO1088_002560;Dbxref=NCBI_GP:QIE14570.1;Name=QIE14570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409626.1;locus_tag=IXO1088_002560;product=avirulence protein;protein_id=QIE14570.1;transl_table=11 CP040687.1 Genbank pseudogene 540394 541520 . + . ID=gene-IXO1088_002565;Name=IXO1088_002565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002565;pseudo=true CP040687.1 Protein Homology CDS 540394 541520 . + 0 ID=cds-IXO1088_002565;Parent=gene-IXO1088_002565;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002805826.1;locus_tag=IXO1088_002565;product=lipase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 541943 542941 . + . ID=gene-IXO1088_002570;Name=IXO1088_002570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002570;pseudo=true CP040687.1 Protein Homology CDS 541943 542941 . + 0 ID=cds-IXO1088_002570;Parent=gene-IXO1088_002570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007962641.1;locus_tag=IXO1088_002570;product=arabinogalactan endo-1%2C4-beta-galactosidase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 543425 546112 . + . ID=gene-IXO1088_002575;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=IXO1088_002575 CP040687.1 Protein Homology CDS 543425 546112 . + 0 ID=cds-QIE14571.1;Parent=gene-IXO1088_002575;Dbxref=NCBI_GP:QIE14571.1;Name=QIE14571.1;gbkey=CDS;gene=aceE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638971.1;locus_tag=IXO1088_002575;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=QIE14571.1;transl_table=11 CP040687.1 Genbank gene 546302 547207 . + . ID=gene-IXO1088_002580;Name=IXO1088_002580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002580 CP040687.1 GeneMarkS-2+ CDS 546302 547207 . + 0 ID=cds-QIE14572.1;Parent=gene-IXO1088_002580;Dbxref=NCBI_GP:QIE14572.1;Name=QIE14572.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_002580;product=hypothetical protein;protein_id=QIE14572.1;transl_table=11 CP040687.1 Genbank gene 547267 547938 . + . ID=gene-IXO1088_002585;Name=IXO1088_002585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002585 CP040687.1 GeneMarkS-2+ CDS 547267 547938 . + 0 ID=cds-QIE14573.1;Parent=gene-IXO1088_002585;Dbxref=NCBI_GP:QIE14573.1;Name=QIE14573.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_002585;product=hypothetical protein;protein_id=QIE14573.1;transl_table=11 CP040687.1 Genbank gene 548044 549146 . + . ID=gene-IXO1088_002590;Name=IXO1088_002590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002590 CP040687.1 Protein Homology CDS 548044 548299 . + 0 ID=cds-QIE14574.1;Parent=gene-IXO1088_002590;Dbxref=NCBI_GP:QIE14574.1;Name=QIE14574.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1088_002590;product=IS3 family transposase;protein_id=QIE14574.1;transl_table=11 CP040687.1 Protein Homology CDS 548299 549146 . + 2 ID=cds-QIE14574.1;Parent=gene-IXO1088_002590;Dbxref=NCBI_GP:QIE14574.1;Name=QIE14574.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1088_002590;product=IS3 family transposase;protein_id=QIE14574.1;transl_table=11 CP040687.1 Genbank gene 549504 549794 . - . ID=gene-IXO1088_002595;Name=IXO1088_002595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002595 CP040687.1 Protein Homology CDS 549504 549794 . - 0 ID=cds-QIE14575.1;Parent=gene-IXO1088_002595;Dbxref=NCBI_GP:QIE14575.1;Name=QIE14575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639360.1;locus_tag=IXO1088_002595;product=DUF2782 domain-containing protein;protein_id=QIE14575.1;transl_table=11 CP040687.1 Genbank gene 549871 552672 . + . ID=gene-IXO1088_002600;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=IXO1088_002600 CP040687.1 Protein Homology CDS 549871 552672 . + 0 ID=cds-QIE14576.1;Parent=gene-IXO1088_002600;Dbxref=NCBI_GP:QIE14576.1;Name=QIE14576.1;gbkey=CDS;gene=polA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639359.1;locus_tag=IXO1088_002600;product=DNA polymerase I;protein_id=QIE14576.1;transl_table=11 CP040687.1 Genbank gene 552752 553708 . - . ID=gene-IXO1088_002605;Name=IXO1088_002605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002605 CP040687.1 Protein Homology CDS 552752 553708 . - 0 ID=cds-QIE14577.1;Parent=gene-IXO1088_002605;Dbxref=NCBI_GP:QIE14577.1;Name=QIE14577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=IXO1088_002605;product=IS30-like element IS1112a family transposase;protein_id=QIE14577.1;transl_table=11 CP040687.1 Genbank pseudogene 554091 554309 . + . ID=gene-IXO1088_002610;Name=IXO1088_002610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002610;pseudo=true CP040687.1 Protein Homology CDS 554091 554309 . + 0 ID=cds-IXO1088_002610;Parent=gene-IXO1088_002610;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300725.1;locus_tag=IXO1088_002610;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 554294 554553 . + . ID=gene-IXO1088_002615;Name=IXO1088_002615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002615;pseudo=true CP040687.1 Protein Homology CDS 554294 554553 . + 0 ID=cds-IXO1088_002615;Parent=gene-IXO1088_002615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369677.1;locus_tag=IXO1088_002615;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 554678 555577 . - . ID=gene-IXO1088_002620;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=IXO1088_002620 CP040687.1 Protein Homology CDS 554678 555577 . - 0 ID=cds-QIE14578.1;Parent=gene-IXO1088_002620;Dbxref=NCBI_GP:QIE14578.1;Name=QIE14578.1;gbkey=CDS;gene=hemF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639358.1;locus_tag=IXO1088_002620;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=QIE14578.1;transl_table=11 CP040687.1 Genbank pseudogene 555920 556627 . + . ID=gene-IXO1088_002625;Name=IXO1088_002625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002625;pseudo=true CP040687.1 Protein Homology CDS 555920 556627 . + 0 ID=cds-IXO1088_002625;Parent=gene-IXO1088_002625;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260659.1;locus_tag=IXO1088_002625;product=IS630 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 556692 557834 . + . ID=gene-IXO1088_002630;Name=IXO1088_002630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002630 CP040687.1 Protein Homology CDS 556692 557834 . + 0 ID=cds-QIE14579.1;Parent=gene-IXO1088_002630;Dbxref=NCBI_GP:QIE14579.1;Name=QIE14579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409614.1;locus_tag=IXO1088_002630;product=IS5 family transposase;protein_id=QIE14579.1;transl_table=11 CP040687.1 Genbank gene 557866 558129 . + . ID=gene-IXO1088_002635;Name=IXO1088_002635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002635 CP040687.1 Protein Homology CDS 557866 558129 . + 0 ID=cds-QIE17841.1;Parent=gene-IXO1088_002635;Dbxref=NCBI_GP:QIE17841.1;Name=QIE17841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635732.1;locus_tag=IXO1088_002635;product=xanthomonadin biosynthesis protein;protein_id=QIE17841.1;transl_table=11 CP040687.1 Genbank pseudogene 558289 558468 . + . ID=gene-IXO1088_002640;Name=IXO1088_002640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002640;pseudo=true CP040687.1 Protein Homology CDS 558289 558468 . + 0 ID=cds-IXO1088_002640;Parent=gene-IXO1088_002640;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509321.1;locus_tag=IXO1088_002640;product=integron integrase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 558493 559869 . - . ID=gene-IXO1088_002645;Name=IXO1088_002645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002645;pseudo=true CP040687.1 Protein Homology CDS 558493 559869 . - 0 ID=cds-IXO1088_002645;Parent=gene-IXO1088_002645;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1088_002645;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 559953 560828 . + . ID=gene-IXO1088_002650;Name=IXO1088_002650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002650 CP040687.1 Protein Homology CDS 559953 560828 . + 0 ID=cds-QIE14580.1;Parent=gene-IXO1088_002650;Dbxref=NCBI_GP:QIE14580.1;Name=QIE14580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260557.1;locus_tag=IXO1088_002650;product=integron integrase;protein_id=QIE14580.1;transl_table=11 CP040687.1 Genbank gene 561059 562897 . - . ID=gene-IXO1088_002655;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=IXO1088_002655 CP040687.1 Protein Homology CDS 561059 562897 . - 0 ID=cds-QIE14581.1;Parent=gene-IXO1088_002655;Dbxref=NCBI_GP:QIE14581.1;Name=QIE14581.1;gbkey=CDS;gene=ilvD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635740.1;locus_tag=IXO1088_002655;product=dihydroxy-acid dehydratase;protein_id=QIE14581.1;transl_table=11 CP040687.1 Genbank gene 563072 563338 . + . ID=gene-IXO1088_002660;Name=IXO1088_002660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002660 CP040687.1 Protein Homology CDS 563072 563338 . + 0 ID=cds-QIE14582.1;Parent=gene-IXO1088_002660;Dbxref=NCBI_GP:QIE14582.1;Name=QIE14582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635741.1;locus_tag=IXO1088_002660;product=YkgJ family cysteine cluster protein;protein_id=QIE14582.1;transl_table=11 CP040687.1 Genbank gene 563364 563909 . - . ID=gene-IXO1088_002665;Name=IXO1088_002665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002665 CP040687.1 Protein Homology CDS 563364 563909 . - 0 ID=cds-QIE14583.1;Parent=gene-IXO1088_002665;Dbxref=NCBI_GP:QIE14583.1;Name=QIE14583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304318.1;locus_tag=IXO1088_002665;product=gamma carbonic anhydrase family protein;protein_id=QIE14583.1;transl_table=11 CP040687.1 Genbank gene 564381 565688 . + . ID=gene-IXO1088_002670;Name=IXO1088_002670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002670 CP040687.1 Protein Homology CDS 564381 565688 . + 0 ID=cds-QIE14584.1;Parent=gene-IXO1088_002670;Dbxref=NCBI_GP:QIE14584.1;Name=QIE14584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635744.1;locus_tag=IXO1088_002670;product=MFS transporter;protein_id=QIE14584.1;transl_table=11 CP040687.1 Genbank gene 565827 567086 . + . ID=gene-IXO1088_002675;Name=IXO1088_002675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002675 CP040687.1 Protein Homology CDS 565827 567086 . + 0 ID=cds-QIE14585.1;Parent=gene-IXO1088_002675;Dbxref=NCBI_GP:QIE14585.1;Name=QIE14585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172339.1;locus_tag=IXO1088_002675;product=HD-GYP domain-containing protein;protein_id=QIE14585.1;transl_table=11 CP040687.1 Genbank pseudogene 567104 567320 . - . ID=gene-IXO1088_002680;Name=IXO1088_002680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002680;pseudo=true CP040687.1 Protein Homology CDS 567104 567320 . - 0 ID=cds-IXO1088_002680;Parent=gene-IXO1088_002680;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113247.1;locus_tag=IXO1088_002680;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 567515 568048 . + . ID=gene-IXO1088_002685;Name=IXO1088_002685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002685 CP040687.1 Protein Homology CDS 567515 568048 . + 0 ID=cds-QIE14586.1;Parent=gene-IXO1088_002685;Dbxref=NCBI_GP:QIE14586.1;Name=QIE14586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912782.1;locus_tag=IXO1088_002685;product=MarR family transcriptional regulator;protein_id=QIE14586.1;transl_table=11 CP040687.1 Genbank pseudogene 568059 569435 . - . ID=gene-IXO1088_002690;Name=IXO1088_002690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002690;pseudo=true CP040687.1 Protein Homology CDS 568059 569435 . - 0 ID=cds-IXO1088_002690;Parent=gene-IXO1088_002690;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1088_002690;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 569434 569652 . + . ID=gene-IXO1088_002695;Name=IXO1088_002695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002695 CP040687.1 Protein Homology CDS 569434 569652 . + 0 ID=cds-QIE14587.1;Parent=gene-IXO1088_002695;Dbxref=NCBI_GP:QIE14587.1;Name=QIE14587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005928609.1;locus_tag=IXO1088_002695;product=hypothetical protein;protein_id=QIE14587.1;transl_table=11 CP040687.1 Genbank gene 569670 569828 . - . ID=gene-IXO1088_002700;Name=IXO1088_002700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002700 CP040687.1 Protein Homology CDS 569670 569828 . - 0 ID=cds-QIE14588.1;Parent=gene-IXO1088_002700;Dbxref=NCBI_GP:QIE14588.1;Name=QIE14588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635615.1;locus_tag=IXO1088_002700;product=DUF1328 domain-containing protein;protein_id=QIE14588.1;transl_table=11 CP040687.1 Genbank gene 569893 570903 . - . ID=gene-IXO1088_002705;Name=IXO1088_002705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002705 CP040687.1 Protein Homology CDS 569893 570903 . - 0 ID=cds-QIE14589.1;Parent=gene-IXO1088_002705;Dbxref=NCBI_GP:QIE14589.1;Name=QIE14589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572201.1;locus_tag=IXO1088_002705;product=NAD-dependent epimerase/dehydratase family protein;protein_id=QIE14589.1;transl_table=11 CP040687.1 Genbank gene 571132 572802 . - . ID=gene-IXO1088_002710;Name=IXO1088_002710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002710 CP040687.1 Protein Homology CDS 571132 572802 . - 0 ID=cds-QIE14590.1;Parent=gene-IXO1088_002710;Dbxref=NCBI_GP:QIE14590.1;Name=QIE14590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260546.1;locus_tag=IXO1088_002710;product=AMP-binding protein;protein_id=QIE14590.1;transl_table=11 CP040687.1 Genbank gene 573121 573504 . + . ID=gene-IXO1088_002715;Name=IXO1088_002715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002715 CP040687.1 Protein Homology CDS 573121 573504 . + 0 ID=cds-QIE14591.1;Parent=gene-IXO1088_002715;Dbxref=NCBI_GP:QIE14591.1;Name=QIE14591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635612.1;locus_tag=IXO1088_002715;product=YkgJ family cysteine cluster protein;protein_id=QIE14591.1;transl_table=11 CP040687.1 Genbank gene 573726 574628 . - . ID=gene-IXO1088_002720;Name=IXO1088_002720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002720 CP040687.1 Protein Homology CDS 573726 574628 . - 0 ID=cds-QIE14592.1;Parent=gene-IXO1088_002720;Dbxref=NCBI_GP:QIE14592.1;Name=QIE14592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635611.1;locus_tag=IXO1088_002720;product=alpha/beta fold hydrolase;protein_id=QIE14592.1;transl_table=11 CP040687.1 Genbank gene 574625 577126 . - . ID=gene-IXO1088_002725;Name=IXO1088_002725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002725 CP040687.1 Protein Homology CDS 574625 577126 . - 0 ID=cds-QIE14593.1;Parent=gene-IXO1088_002725;Dbxref=NCBI_GP:QIE14593.1;Name=QIE14593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635610.1;locus_tag=IXO1088_002725;product=helicase SNF2;protein_id=QIE14593.1;transl_table=11 CP040687.1 Genbank pseudogene 577128 577886 . - . ID=gene-IXO1088_002730;Name=IXO1088_002730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002730;pseudo=true CP040687.1 Protein Homology CDS 577128 577886 . - 0 ID=cds-IXO1088_002730;Parent=gene-IXO1088_002730;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635609.1;locus_tag=IXO1088_002730;product=site-specific DNA-methyltransferase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 577902 579839 . - . ID=gene-IXO1088_002735;Name=IXO1088_002735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002735 CP040687.1 Protein Homology CDS 577902 579839 . - 0 ID=cds-QIE14594.1;Parent=gene-IXO1088_002735;Dbxref=NCBI_GP:QIE14594.1;Name=QIE14594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1088_002735;product=IS1595 family transposase;protein_id=QIE14594.1;transl_table=11 CP040687.1 Genbank gene 579836 580999 . - . ID=gene-IXO1088_002740;Name=IXO1088_002740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002740 CP040687.1 Protein Homology CDS 579836 580999 . - 0 ID=cds-QIE14595.1;Parent=gene-IXO1088_002740;Dbxref=NCBI_GP:QIE14595.1;Name=QIE14595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112724.1;locus_tag=IXO1088_002740;product=Fic family protein;protein_id=QIE14595.1;transl_table=11 CP040687.1 Genbank gene 581071 582087 . - . ID=gene-IXO1088_002745;Name=IXO1088_002745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002745 CP040687.1 Protein Homology CDS 581071 582087 . - 0 ID=cds-QIE14596.1;Parent=gene-IXO1088_002745;Dbxref=NCBI_GP:QIE14596.1;Name=QIE14596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809874.1;locus_tag=IXO1088_002745;product=3-oxoacyl-ACP synthase III;protein_id=QIE14596.1;transl_table=11 CP040687.1 Genbank gene 582189 582509 . - . ID=gene-IXO1088_002750;Name=IXO1088_002750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002750 CP040687.1 Protein Homology CDS 582189 582509 . - 0 ID=cds-QIE14597.1;Parent=gene-IXO1088_002750;Dbxref=NCBI_GP:QIE14597.1;Name=QIE14597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488921.1;locus_tag=IXO1088_002750;product=DUF4156 domain-containing protein;protein_id=QIE14597.1;transl_table=11 CP040687.1 Genbank gene 582895 583356 . + . ID=gene-IXO1088_002755;Name=IXO1088_002755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002755 CP040687.1 Protein Homology CDS 582895 583356 . + 0 ID=cds-QIE14598.1;Parent=gene-IXO1088_002755;Dbxref=NCBI_GP:QIE14598.1;Name=QIE14598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912218.1;locus_tag=IXO1088_002755;product=hypothetical protein;protein_id=QIE14598.1;transl_table=11 CP040687.1 Genbank gene 583383 583859 . + . ID=gene-IXO1088_002760;Name=IXO1088_002760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002760 CP040687.1 Protein Homology CDS 583383 583859 . + 0 ID=cds-QIE14599.1;Parent=gene-IXO1088_002760;Dbxref=NCBI_GP:QIE14599.1;Name=QIE14599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635604.1;locus_tag=IXO1088_002760;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=QIE14599.1;transl_table=11 CP040687.1 Genbank gene 584201 585424 . - . ID=gene-IXO1088_002765;Name=IXO1088_002765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002765 CP040687.1 Protein Homology CDS 584201 585424 . - 0 ID=cds-QIE14600.1;Parent=gene-IXO1088_002765;Dbxref=NCBI_GP:QIE14600.1;Name=QIE14600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501531.1;locus_tag=IXO1088_002765;product=MFS transporter;protein_id=QIE14600.1;transl_table=11 CP040687.1 Genbank gene 585529 586140 . - . ID=gene-IXO1088_002770;Name=IXO1088_002770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002770 CP040687.1 Protein Homology CDS 585529 586140 . - 0 ID=cds-QIE14601.1;Parent=gene-IXO1088_002770;Dbxref=NCBI_GP:QIE14601.1;Name=QIE14601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966364.1;locus_tag=IXO1088_002770;product=hypothetical protein;protein_id=QIE14601.1;transl_table=11 CP040687.1 Genbank gene 586242 586985 . - . ID=gene-IXO1088_002775;Name=IXO1088_002775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002775 CP040687.1 Protein Homology CDS 586242 586985 . - 0 ID=cds-QIE14602.1;Parent=gene-IXO1088_002775;Dbxref=NCBI_GP:QIE14602.1;Name=QIE14602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501529.1;locus_tag=IXO1088_002775;product=hypothetical protein;protein_id=QIE14602.1;transl_table=11 CP040687.1 Genbank gene 587176 588522 . - . ID=gene-IXO1088_002780;Name=IXO1088_002780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002780 CP040687.1 Protein Homology CDS 587176 588522 . - 0 ID=cds-QIE14603.1;Parent=gene-IXO1088_002780;Dbxref=NCBI_GP:QIE14603.1;Name=QIE14603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966360.1;locus_tag=IXO1088_002780;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=QIE14603.1;transl_table=11 CP040687.1 Genbank gene 588507 589949 . - . ID=gene-IXO1088_002785;Name=IXO1088_002785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002785 CP040687.1 Protein Homology CDS 588507 589949 . - 0 ID=cds-QIE14604.1;Parent=gene-IXO1088_002785;Dbxref=NCBI_GP:QIE14604.1;Name=QIE14604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156414.1;locus_tag=IXO1088_002785;product=HAMP domain-containing histidine kinase;protein_id=QIE14604.1;transl_table=11 CP040687.1 Genbank pseudogene 589999 591725 . - . ID=gene-IXO1088_002790;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=pseudogene;locus_tag=IXO1088_002790;pseudo=true CP040687.1 Protein Homology CDS 589999 591725 . - 0 ID=cds-IXO1088_002790;Parent=gene-IXO1088_002790;Note=frameshifted;gbkey=CDS;gene=poxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635601.1;locus_tag=IXO1088_002790;product=ubiquinone-dependent pyruvate dehydrogenase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 592083 592679 . + . ID=gene-IXO1088_002795;Name=IXO1088_002795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002795 CP040687.1 Protein Homology CDS 592083 592679 . + 0 ID=cds-QIE14605.1;Parent=gene-IXO1088_002795;Dbxref=NCBI_GP:QIE14605.1;Name=QIE14605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635600.1;locus_tag=IXO1088_002795;product=Ax21 family protein;protein_id=QIE14605.1;transl_table=11 CP040687.1 Genbank gene 593002 594027 . - . ID=gene-IXO1088_002800;Name=IXO1088_002800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002800 CP040687.1 Protein Homology CDS 593002 594027 . - 0 ID=cds-QIE14606.1;Parent=gene-IXO1088_002800;Dbxref=NCBI_GP:QIE14606.1;Name=QIE14606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635599.1;locus_tag=IXO1088_002800;product=NAD(P)-dependent glycerol-3-phosphate dehydrogenase;protein_id=QIE14606.1;transl_table=11 CP040687.1 Genbank gene 594043 594558 . - . ID=gene-IXO1088_002805;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=IXO1088_002805 CP040687.1 Protein Homology CDS 594043 594558 . - 0 ID=cds-QIE14607.1;Parent=gene-IXO1088_002805;Dbxref=NCBI_GP:QIE14607.1;Name=QIE14607.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635598.1;locus_tag=IXO1088_002805;product=protein-export chaperone SecB;protein_id=QIE14607.1;transl_table=11 CP040687.1 Genbank gene 594668 595102 . - . ID=gene-IXO1088_002810;Name=IXO1088_002810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002810 CP040687.1 Protein Homology CDS 594668 595102 . - 0 ID=cds-QIE14608.1;Parent=gene-IXO1088_002810;Dbxref=NCBI_GP:QIE14608.1;Name=QIE14608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156410.1;locus_tag=IXO1088_002810;product=rhodanese-like domain-containing protein;protein_id=QIE14608.1;transl_table=11 CP040687.1 Genbank gene 595178 595600 . - . ID=gene-IXO1088_002815;Name=IXO1088_002815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002815 CP040687.1 Protein Homology CDS 595178 595600 . - 0 ID=cds-QIE14609.1;Parent=gene-IXO1088_002815;Dbxref=NCBI_GP:QIE14609.1;Name=QIE14609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635596.1;locus_tag=IXO1088_002815;product=hypothetical protein;protein_id=QIE14609.1;transl_table=11 CP040687.1 Genbank gene 595629 596099 . - . ID=gene-IXO1088_002820;Name=IXO1088_002820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002820 CP040687.1 Protein Homology CDS 595629 596099 . - 0 ID=cds-QIE14610.1;Parent=gene-IXO1088_002820;Dbxref=NCBI_GP:QIE14610.1;Name=QIE14610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156408.1;locus_tag=IXO1088_002820;product=thioesterase;protein_id=QIE14610.1;transl_table=11 CP040687.1 Genbank gene 596562 597527 . + . ID=gene-IXO1088_002825;Name=IXO1088_002825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002825 CP040687.1 Protein Homology CDS 596562 597527 . + 0 ID=cds-QIE14611.1;Parent=gene-IXO1088_002825;Dbxref=NCBI_GP:QIE14611.1;Name=QIE14611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_002825;product=IS1595-like element ISXo5 family transposase;protein_id=QIE14611.1;transl_table=11 CP040687.1 Genbank pseudogene 597532 597942 . + . ID=gene-IXO1088_002830;Name=IXO1088_002830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002830;pseudo=true CP040687.1 Protein Homology CDS 597532 597942 . + 0 ID=cds-IXO1088_002830;Parent=gene-IXO1088_002830;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_002830;product=IS5-like element ISXo3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 598052 598261 . - . ID=gene-IXO1088_002835;Name=IXO1088_002835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002835 CP040687.1 Protein Homology CDS 598052 598261 . - 0 ID=cds-QIE14612.1;Parent=gene-IXO1088_002835;Dbxref=NCBI_GP:QIE14612.1;Name=QIE14612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380028.1;locus_tag=IXO1088_002835;product=hypothetical protein;protein_id=QIE14612.1;transl_table=11 CP040687.1 Genbank gene 598271 599638 . + . ID=gene-IXO1088_002840;Name=IXO1088_002840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002840 CP040687.1 Protein Homology CDS 598271 599638 . + 0 ID=cds-QIE14613.1;Parent=gene-IXO1088_002840;Dbxref=NCBI_GP:QIE14613.1;Name=QIE14613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007973536.1;locus_tag=IXO1088_002840;product=VOC family protein;protein_id=QIE14613.1;transl_table=11 CP040687.1 Genbank pseudogene 599687 599861 . - . ID=gene-IXO1088_002845;Name=IXO1088_002845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002845;pseudo=true CP040687.1 Protein Homology CDS 599687 599861 . - 0 ID=cds-IXO1088_002845;Parent=gene-IXO1088_002845;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363736.1;locus_tag=IXO1088_002845;product=glyoxalase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 599928 603068 . - . ID=gene-IXO1088_002850;Name=IXO1088_002850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002850 CP040687.1 Protein Homology CDS 599928 603068 . - 0 ID=cds-QIE14614.1;Parent=gene-IXO1088_002850;Dbxref=NCBI_GP:QIE14614.1;Name=QIE14614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639134.1;locus_tag=IXO1088_002850;product=efflux RND transporter permease subunit;protein_id=QIE14614.1;transl_table=11 CP040687.1 Genbank gene 603202 606450 . - . ID=gene-IXO1088_002855;Name=IXO1088_002855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002855 CP040687.1 Protein Homology CDS 603202 606450 . - 0 ID=cds-QIE14615.1;Parent=gene-IXO1088_002855;Dbxref=NCBI_GP:QIE14615.1;Name=QIE14615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019238036.1;locus_tag=IXO1088_002855;product=acriflavine resistance protein B;protein_id=QIE14615.1;transl_table=11 CP040687.1 Genbank gene 606543 607787 . - . ID=gene-IXO1088_002860;Name=IXO1088_002860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002860 CP040687.1 Protein Homology CDS 606543 607787 . - 0 ID=cds-QIE14616.1;Parent=gene-IXO1088_002860;Dbxref=NCBI_GP:QIE14616.1;Name=QIE14616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849343.1;locus_tag=IXO1088_002860;product=efflux RND transporter periplasmic adaptor subunit;protein_id=QIE14616.1;transl_table=11 CP040687.1 Genbank gene 608047 609363 . + . ID=gene-IXO1088_002865;Name=IXO1088_002865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002865 CP040687.1 Protein Homology CDS 608047 609363 . + 0 ID=cds-QIE14617.1;Parent=gene-IXO1088_002865;Dbxref=NCBI_GP:QIE14617.1;Name=QIE14617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304562.1;locus_tag=IXO1088_002865;product=amidohydrolase;protein_id=QIE14617.1;transl_table=11 CP040687.1 Genbank pseudogene 609370 610029 . - . ID=gene-IXO1088_002870;Name=IXO1088_002870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002870;pseudo=true CP040687.1 Protein Homology CDS 609370 610029 . - 0 ID=cds-IXO1088_002870;Parent=gene-IXO1088_002870;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002801519.1;locus_tag=IXO1088_002870;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 610122 610937 . + . ID=gene-IXO1088_002875;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=IXO1088_002875 CP040687.1 Protein Homology CDS 610122 610937 . + 0 ID=cds-QIE14618.1;Parent=gene-IXO1088_002875;Dbxref=NCBI_GP:QIE14618.1;Name=QIE14618.1;gbkey=CDS;gene=queF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639130.1;locus_tag=IXO1088_002875;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=QIE14618.1;transl_table=11 CP040687.1 Genbank pseudogene 611041 611351 . + . ID=gene-IXO1088_002880;Name=IXO1088_002880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002880;pseudo=true CP040687.1 Protein Homology CDS 611041 611351 . + 0 ID=cds-IXO1088_002880;Parent=gene-IXO1088_002880;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005923039.1;locus_tag=IXO1088_002880;product=peptidoglycan-binding protein LysM;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 611313 611441 . - . ID=gene-IXO1088_002885;Name=IXO1088_002885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002885;pseudo=true CP040687.1 Protein Homology CDS 611313 611441 . - 0 ID=cds-IXO1088_002885;Parent=gene-IXO1088_002885;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408523.1;locus_tag=IXO1088_002885;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 611405 612589 . + . ID=gene-IXO1088_002890;Name=IXO1088_002890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002890;pseudo=true CP040687.1 Protein Homology CDS 611405 612589 . + 0 ID=cds-IXO1088_002890;Parent=gene-IXO1088_002890;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557964.1;locus_tag=IXO1088_002890;product=IS256 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 612637 612821 . + . ID=gene-IXO1088_002895;Name=IXO1088_002895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002895;pseudo=true CP040687.1 Protein Homology CDS 612637 612821 . + 0 ID=cds-IXO1088_002895;Parent=gene-IXO1088_002895;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637260.1;locus_tag=IXO1088_002895;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 612965 613771 . + . ID=gene-IXO1088_002900;Name=IXO1088_002900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002900 CP040687.1 Protein Homology CDS 612965 613771 . + 0 ID=cds-QIE14619.1;Parent=gene-IXO1088_002900;Dbxref=NCBI_GP:QIE14619.1;Name=QIE14619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002801519.1;locus_tag=IXO1088_002900;product=IS5 family transposase;protein_id=QIE14619.1;transl_table=11 CP040687.1 Genbank gene 614303 618112 . - . ID=gene-IXO1088_002905;Name=IXO1088_002905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002905 CP040687.1 Protein Homology CDS 614303 618112 . - 0 ID=cds-QIE17842.1;Parent=gene-IXO1088_002905;Dbxref=NCBI_GP:QIE17842.1;Name=QIE17842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920361.1;locus_tag=IXO1088_002905;product=RHS repeat protein;protein_id=QIE17842.1;transl_table=11 CP040687.1 Genbank pseudogene 618821 619953 . - . ID=gene-IXO1088_002910;Name=IXO1088_002910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002910;pseudo=true CP040687.1 Protein Homology CDS 618821 619953 . - 0 ID=cds-IXO1088_002910;Parent=gene-IXO1088_002910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408015.1;locus_tag=IXO1088_002910;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 620028 620195 . + . ID=gene-IXO1088_002915;Name=IXO1088_002915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002915;pseudo=true CP040687.1 Protein Homology CDS 620028 620195 . + 0 ID=cds-IXO1088_002915;Parent=gene-IXO1088_002915;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257114.1;locus_tag=IXO1088_002915;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 620184 620276 . - . ID=gene-IXO1088_002920;Name=IXO1088_002920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002920;pseudo=true CP040687.1 Protein Homology CDS 620184 620276 . - 0 ID=cds-IXO1088_002920;Parent=gene-IXO1088_002920;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257538.1;locus_tag=IXO1088_002920;product=alcohol dehydrogenase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 620313 621527 . + . ID=gene-IXO1088_002925;Name=IXO1088_002925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002925;pseudo=true CP040687.1 Protein Homology CDS 620313 621527 . + 0 ID=cds-IXO1088_002925;Parent=gene-IXO1088_002925;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1088_002925;product=IS4-like element ISXo14 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 621710 621856 . + . ID=gene-IXO1088_002930;Name=IXO1088_002930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002930;pseudo=true CP040687.1 Protein Homology CDS 621710 621856 . + 0 ID=cds-IXO1088_002930;Parent=gene-IXO1088_002930;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_002930;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 621886 623262 . - . ID=gene-IXO1088_002935;Name=IXO1088_002935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002935 CP040687.1 Protein Homology CDS 621886 623262 . - 0 ID=cds-QIE17843.1;Parent=gene-IXO1088_002935;Dbxref=NCBI_GP:QIE17843.1;Name=QIE17843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1088_002935;product=IS5 family transposase;protein_id=QIE17843.1;transl_table=11 CP040687.1 Genbank gene 623411 625123 . - . ID=gene-IXO1088_002940;Name=IXO1088_002940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002940 CP040687.1 Protein Homology CDS 623411 625123 . - 0 ID=cds-QIE14620.1;Parent=gene-IXO1088_002940;Dbxref=NCBI_GP:QIE14620.1;Name=QIE14620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300075.1;locus_tag=IXO1088_002940;product=hypothetical protein;protein_id=QIE14620.1;transl_table=11 CP040687.1 Genbank gene 625313 627544 . + . ID=gene-IXO1088_002945;Name=IXO1088_002945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002945 CP040687.1 Protein Homology CDS 625313 627544 . + 0 ID=cds-QIE14621.1;Parent=gene-IXO1088_002945;Dbxref=NCBI_GP:QIE14621.1;Name=QIE14621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639127.1;locus_tag=IXO1088_002945;product=NADP-dependent isocitrate dehydrogenase;protein_id=QIE14621.1;transl_table=11 CP040687.1 Genbank pseudogene 627618 627850 . - . ID=gene-IXO1088_002950;Name=IXO1088_002950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002950;pseudo=true CP040687.1 Protein Homology CDS 627618 627850 . - 0 ID=cds-IXO1088_002950;Parent=gene-IXO1088_002950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300073.1;locus_tag=IXO1088_002950;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 627876 628100 . + . ID=gene-IXO1088_002955;Name=IXO1088_002955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_002955;pseudo=true CP040687.1 Protein Homology CDS 627876 628100 . + 0 ID=cds-IXO1088_002955;Parent=gene-IXO1088_002955;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005414642.1;locus_tag=IXO1088_002955;product=biotin transporter BioY;pseudo=true;transl_table=11 CP040687.1 Genbank gene 628148 629250 . - . ID=gene-IXO1088_002960;Name=IXO1088_002960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002960 CP040687.1 Protein Homology CDS 628995 629250 . - 0 ID=cds-QIE14622.1;Parent=gene-IXO1088_002960;Dbxref=NCBI_GP:QIE14622.1;Name=QIE14622.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1088_002960;product=IS3 family transposase;protein_id=QIE14622.1;transl_table=11 CP040687.1 Protein Homology CDS 628148 628995 . - 2 ID=cds-QIE14622.1;Parent=gene-IXO1088_002960;Dbxref=NCBI_GP:QIE14622.1;Name=QIE14622.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1088_002960;product=IS3 family transposase;protein_id=QIE14622.1;transl_table=11 CP040687.1 Genbank gene 629299 629973 . - . ID=gene-IXO1088_002965;Name=IXO1088_002965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002965 CP040687.1 Protein Homology CDS 629299 629973 . - 0 ID=cds-QIE14623.1;Parent=gene-IXO1088_002965;Dbxref=NCBI_GP:QIE14623.1;Name=QIE14623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409582.1;locus_tag=IXO1088_002965;product=conjugal transfer protein TraG;protein_id=QIE14623.1;transl_table=11 CP040687.1 Genbank gene 630679 631260 . + . ID=gene-IXO1088_002970;Name=IXO1088_002970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002970 CP040687.1 Protein Homology CDS 630679 631260 . + 0 ID=cds-QIE14624.1;Parent=gene-IXO1088_002970;Dbxref=NCBI_GP:QIE14624.1;Name=QIE14624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802968.1;locus_tag=IXO1088_002970;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=QIE14624.1;transl_table=11 CP040687.1 Genbank gene 631413 632042 . + . ID=gene-IXO1088_002975;Name=IXO1088_002975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002975 CP040687.1 Protein Homology CDS 631413 632042 . + 0 ID=cds-QIE14625.1;Parent=gene-IXO1088_002975;Dbxref=NCBI_GP:QIE14625.1;Name=QIE14625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635862.1;locus_tag=IXO1088_002975;product=flavin reductase family protein;protein_id=QIE14625.1;transl_table=11 CP040687.1 Genbank gene 632160 633197 . + . ID=gene-IXO1088_002980;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=IXO1088_002980 CP040687.1 Protein Homology CDS 632160 633197 . + 0 ID=cds-QIE14626.1;Parent=gene-IXO1088_002980;Dbxref=NCBI_GP:QIE14626.1;Name=QIE14626.1;gbkey=CDS;gene=trpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157930.1;locus_tag=IXO1088_002980;product=anthranilate phosphoribosyltransferase;protein_id=QIE14626.1;transl_table=11 CP040687.1 Genbank gene 633334 634131 . + . ID=gene-IXO1088_002985;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=IXO1088_002985 CP040687.1 Protein Homology CDS 633334 634131 . + 0 ID=cds-QIE14627.1;Parent=gene-IXO1088_002985;Dbxref=NCBI_GP:QIE14627.1;Name=QIE14627.1;gbkey=CDS;gene=trpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635864.1;locus_tag=IXO1088_002985;product=indole-3-glycerol phosphate synthase TrpC;protein_id=QIE14627.1;transl_table=11 CP040687.1 Genbank gene 634124 634840 . + . ID=gene-IXO1088_002990;Name=IXO1088_002990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002990 CP040687.1 Protein Homology CDS 634124 634840 . + 0 ID=cds-QIE14628.1;Parent=gene-IXO1088_002990;Dbxref=NCBI_GP:QIE14628.1;Name=QIE14628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635865.1;locus_tag=IXO1088_002990;product=haloacid dehalogenase-like hydrolase;protein_id=QIE14628.1;transl_table=11 CP040687.1 Genbank gene 635161 635853 . - . ID=gene-IXO1088_002995;Name=IXO1088_002995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_002995 CP040687.1 Protein Homology CDS 635161 635853 . - 0 ID=cds-QIE14629.1;Parent=gene-IXO1088_002995;Dbxref=NCBI_GP:QIE14629.1;Name=QIE14629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635866.1;locus_tag=IXO1088_002995;product=CRP-like protein Clp;protein_id=QIE14629.1;transl_table=11 CP040687.1 Genbank gene 635991 636785 . + . ID=gene-IXO1088_003000;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=IXO1088_003000 CP040687.1 Protein Homology CDS 635991 636785 . + 0 ID=cds-QIE14630.1;Parent=gene-IXO1088_003000;Dbxref=NCBI_GP:QIE14630.1;Name=QIE14630.1;gbkey=CDS;gene=speD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635867.1;locus_tag=IXO1088_003000;product=adenosylmethionine decarboxylase;protein_id=QIE14630.1;transl_table=11 CP040687.1 Genbank gene 636945 637259 . + . ID=gene-IXO1088_003005;Name=IXO1088_003005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003005 CP040687.1 Protein Homology CDS 636945 637259 . + 0 ID=cds-QIE17844.1;Parent=gene-IXO1088_003005;Dbxref=NCBI_GP:QIE17844.1;Name=QIE17844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635868.1;locus_tag=IXO1088_003005;product=multidrug efflux SMR transporter;protein_id=QIE17844.1;transl_table=11 CP040687.1 Genbank gene 637542 638195 . - . ID=gene-IXO1088_003010;Name=IXO1088_003010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003010 CP040687.1 Protein Homology CDS 637542 638195 . - 0 ID=cds-QIE14631.1;Parent=gene-IXO1088_003010;Dbxref=NCBI_GP:QIE14631.1;Name=QIE14631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483072.1;locus_tag=IXO1088_003010;product=2-nonaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase;protein_id=QIE14631.1;transl_table=11 CP040687.1 Genbank gene 638381 638809 . + . ID=gene-IXO1088_003015;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=IXO1088_003015 CP040687.1 Protein Homology CDS 638381 638809 . + 0 ID=cds-QIE14632.1;Parent=gene-IXO1088_003015;Dbxref=NCBI_GP:QIE14632.1;Name=QIE14632.1;gbkey=CDS;gene=rplM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635870.1;locus_tag=IXO1088_003015;product=50S ribosomal protein L13;protein_id=QIE14632.1;transl_table=11 CP040687.1 Genbank gene 638813 639205 . + . ID=gene-IXO1088_003020;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=IXO1088_003020 CP040687.1 Protein Homology CDS 638813 639205 . + 0 ID=cds-QIE14633.1;Parent=gene-IXO1088_003020;Dbxref=NCBI_GP:QIE14633.1;Name=QIE14633.1;gbkey=CDS;gene=rpsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019661502.1;locus_tag=IXO1088_003020;product=30S ribosomal protein S9;protein_id=QIE14633.1;transl_table=11 CP040687.1 Genbank gene 639433 639506 . - . ID=gene-IXO1088_003025;Name=IXO1088_003025;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_003025 CP040687.1 tRNAscan-SE tRNA 639433 639506 . - . ID=rna-IXO1088_003025;Parent=gene-IXO1088_003025;anticodon=(pos:complement(639472..639474));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_003025;product=tRNA-Gln CP040687.1 tRNAscan-SE exon 639433 639506 . - . ID=exon-IXO1088_003025-1;Parent=rna-IXO1088_003025;anticodon=(pos:complement(639472..639474));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_003025;product=tRNA-Gln CP040687.1 Genbank gene 639559 639635 . - . ID=gene-IXO1088_003030;Name=IXO1088_003030;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_003030 CP040687.1 tRNAscan-SE tRNA 639559 639635 . - . ID=rna-IXO1088_003030;Parent=gene-IXO1088_003030;anticodon=(pos:complement(639599..639601));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_003030;product=tRNA-Met CP040687.1 tRNAscan-SE exon 639559 639635 . - . ID=exon-IXO1088_003030-1;Parent=rna-IXO1088_003030;anticodon=(pos:complement(639599..639601));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_003030;product=tRNA-Met CP040687.1 Genbank gene 639754 640371 . + . ID=gene-IXO1088_003035;Name=IXO1088_003035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003035 CP040687.1 Protein Homology CDS 639754 640371 . + 0 ID=cds-QIE14634.1;Parent=gene-IXO1088_003035;Dbxref=NCBI_GP:QIE14634.1;Name=QIE14634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635872.1;locus_tag=IXO1088_003035;product=RNA pyrophosphohydrolase;protein_id=QIE14634.1;transl_table=11 CP040687.1 Genbank gene 640452 640667 . + . ID=gene-IXO1088_003040;Name=IXO1088_003040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003040 CP040687.1 Protein Homology CDS 640452 640667 . + 0 ID=cds-QIE14635.1;Parent=gene-IXO1088_003040;Dbxref=NCBI_GP:QIE14635.1;Name=QIE14635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005411309.1;locus_tag=IXO1088_003040;product=bacterioferritin;protein_id=QIE14635.1;transl_table=11 CP040687.1 Genbank gene 641010 641480 . + . ID=gene-IXO1088_003045;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=IXO1088_003045 CP040687.1 Protein Homology CDS 641010 641480 . + 0 ID=cds-QIE14636.1;Parent=gene-IXO1088_003045;Dbxref=NCBI_GP:QIE14636.1;Name=QIE14636.1;gbkey=CDS;gene=bfr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635874.1;locus_tag=IXO1088_003045;product=bacterioferritin;protein_id=QIE14636.1;transl_table=11 CP040687.1 Genbank gene 641493 642458 . - . ID=gene-IXO1088_003050;Name=IXO1088_003050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003050 CP040687.1 Protein Homology CDS 641493 642458 . - 0 ID=cds-QIE14637.1;Parent=gene-IXO1088_003050;Dbxref=NCBI_GP:QIE14637.1;Name=QIE14637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_003050;product=IS1595-like element ISXo5 family transposase;protein_id=QIE14637.1;transl_table=11 CP040687.1 Genbank gene 642537 643516 . - . ID=gene-IXO1088_003055;Name=IXO1088_003055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003055 CP040687.1 Protein Homology CDS 643327 643516 . - 0 ID=cds-QIE14638.1;Parent=gene-IXO1088_003055;Dbxref=NCBI_GP:QIE14638.1;Name=QIE14638.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611071.1;locus_tag=IXO1088_003055;product=IS3 family transposase;protein_id=QIE14638.1;transl_table=11 CP040687.1 Protein Homology CDS 642537 643327 . - 2 ID=cds-QIE14638.1;Parent=gene-IXO1088_003055;Dbxref=NCBI_GP:QIE14638.1;Name=QIE14638.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611071.1;locus_tag=IXO1088_003055;product=IS3 family transposase;protein_id=QIE14638.1;transl_table=11 CP040687.1 Genbank gene 643676 646876 . - . ID=gene-IXO1088_003060;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=IXO1088_003060 CP040687.1 Protein Homology CDS 643676 646876 . - 0 ID=cds-QIE14639.1;Parent=gene-IXO1088_003060;Dbxref=NCBI_GP:QIE14639.1;Name=QIE14639.1;gbkey=CDS;gene=putA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639180.1;locus_tag=IXO1088_003060;product=bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA;protein_id=QIE14639.1;transl_table=11 CP040687.1 Genbank gene 647153 647629 . + . ID=gene-IXO1088_003065;Name=IXO1088_003065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003065 CP040687.1 Protein Homology CDS 647153 647629 . + 0 ID=cds-QIE17845.1;Parent=gene-IXO1088_003065;Dbxref=NCBI_GP:QIE17845.1;Name=QIE17845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484655.1;locus_tag=IXO1088_003065;product=DUF2244 domain-containing protein;protein_id=QIE17845.1;transl_table=11 CP040687.1 Genbank gene 647646 648599 . + . ID=gene-IXO1088_003070;Name=coxB;gbkey=Gene;gene=coxB;gene_biotype=protein_coding;locus_tag=IXO1088_003070 CP040687.1 Protein Homology CDS 647646 648599 . + 0 ID=cds-QIE14640.1;Parent=gene-IXO1088_003070;Dbxref=NCBI_GP:QIE14640.1;Name=QIE14640.1;gbkey=CDS;gene=coxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157718.1;locus_tag=IXO1088_003070;product=cytochrome c oxidase subunit II;protein_id=QIE14640.1;transl_table=11 CP040687.1 Genbank gene 648638 650242 . + . ID=gene-IXO1088_003075;Name=ctaD;gbkey=Gene;gene=ctaD;gene_biotype=protein_coding;locus_tag=IXO1088_003075 CP040687.1 Protein Homology CDS 648638 650242 . + 0 ID=cds-QIE14641.1;Parent=gene-IXO1088_003075;Dbxref=NCBI_GP:QIE14641.1;Name=QIE14641.1;gbkey=CDS;gene=ctaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639177.1;locus_tag=IXO1088_003075;product=cytochrome c oxidase subunit I;protein_id=QIE14641.1;transl_table=11 CP040687.1 Genbank gene 650223 650396 . + . ID=gene-IXO1088_003080;Name=IXO1088_003080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003080 CP040687.1 Protein Homology CDS 650223 650396 . + 0 ID=cds-QIE14642.1;Parent=gene-IXO1088_003080;Dbxref=NCBI_GP:QIE14642.1;Name=QIE14642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639176.1;locus_tag=IXO1088_003080;product=hypothetical protein;protein_id=QIE14642.1;transl_table=11 CP040687.1 Genbank gene 650393 650989 . + . ID=gene-IXO1088_003085;Name=IXO1088_003085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003085 CP040687.1 Protein Homology CDS 650393 650989 . + 0 ID=cds-QIE14643.1;Parent=gene-IXO1088_003085;Dbxref=NCBI_GP:QIE14643.1;Name=QIE14643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639175.1;locus_tag=IXO1088_003085;product=cytochrome c oxidase assembly protein;protein_id=QIE14643.1;transl_table=11 CP040687.1 Genbank gene 651028 651903 . + . ID=gene-IXO1088_003090;Name=IXO1088_003090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003090 CP040687.1 Protein Homology CDS 651028 651903 . + 0 ID=cds-QIE14644.1;Parent=gene-IXO1088_003090;Dbxref=NCBI_GP:QIE14644.1;Name=QIE14644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639174.1;locus_tag=IXO1088_003090;product=cytochrome c oxidase subunit 3;protein_id=QIE14644.1;transl_table=11 CP040687.1 Genbank gene 652003 652221 . - . ID=gene-IXO1088_003095;Name=IXO1088_003095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003095 CP040687.1 Protein Homology CDS 652003 652221 . - 0 ID=cds-QIE14645.1;Parent=gene-IXO1088_003095;Dbxref=NCBI_GP:QIE14645.1;Name=QIE14645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639173.1;locus_tag=IXO1088_003095;product=twin transmembrane helix small protein;protein_id=QIE14645.1;transl_table=11 CP040687.1 Genbank gene 652282 653001 . + . ID=gene-IXO1088_003100;Name=IXO1088_003100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003100 CP040687.1 Protein Homology CDS 652282 653001 . + 0 ID=cds-QIE14646.1;Parent=gene-IXO1088_003100;Dbxref=NCBI_GP:QIE14646.1;Name=QIE14646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902807.1;locus_tag=IXO1088_003100;product=SURF1 family protein;protein_id=QIE14646.1;transl_table=11 CP040687.1 Genbank gene 653029 653604 . + . ID=gene-IXO1088_003105;Name=IXO1088_003105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003105 CP040687.1 Protein Homology CDS 653029 653604 . + 0 ID=cds-QIE14647.1;Parent=gene-IXO1088_003105;Dbxref=NCBI_GP:QIE14647.1;Name=QIE14647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639171.1;locus_tag=IXO1088_003105;product=hypothetical protein;protein_id=QIE14647.1;transl_table=11 CP040687.1 Genbank gene 653615 654778 . + . ID=gene-IXO1088_003110;Name=IXO1088_003110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003110 CP040687.1 Protein Homology CDS 653615 654778 . + 0 ID=cds-QIE14648.1;Parent=gene-IXO1088_003110;Dbxref=NCBI_GP:QIE14648.1;Name=QIE14648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639170.1;locus_tag=IXO1088_003110;product=heme A synthase;protein_id=QIE14648.1;transl_table=11 CP040687.1 Genbank gene 654781 655677 . + . ID=gene-IXO1088_003115;Name=IXO1088_003115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003115 CP040687.1 Protein Homology CDS 654781 655677 . + 0 ID=cds-QIE14649.1;Parent=gene-IXO1088_003115;Dbxref=NCBI_GP:QIE14649.1;Name=QIE14649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966545.1;locus_tag=IXO1088_003115;product=protoheme IX farnesyltransferase;protein_id=QIE14649.1;transl_table=11 CP040687.1 Genbank gene 655869 655945 . + . ID=gene-IXO1088_003120;Name=IXO1088_003120;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_003120 CP040687.1 cmsearch ncRNA 655869 655945 . + . ID=rna-IXO1088_003120;Parent=gene-IXO1088_003120;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_003120;product=sX9 sRNA CP040687.1 cmsearch exon 655869 655945 . + . ID=exon-IXO1088_003120-1;Parent=rna-IXO1088_003120;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_003120;product=sX9 sRNA CP040687.1 Genbank gene 656066 657646 . - . ID=gene-IXO1088_003125;Name=IXO1088_003125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003125 CP040687.1 Protein Homology CDS 656066 657646 . - 0 ID=cds-QIE14650.1;Parent=gene-IXO1088_003125;Dbxref=NCBI_GP:QIE14650.1;Name=QIE14650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174430.1;locus_tag=IXO1088_003125;product=DUF255 domain-containing protein;protein_id=QIE14650.1;transl_table=11 CP040687.1 Genbank gene 657830 658876 . - . ID=gene-IXO1088_003130;Name=IXO1088_003130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003130 CP040687.1 Protein Homology CDS 657830 658876 . - 0 ID=cds-QIE14651.1;Parent=gene-IXO1088_003130;Dbxref=NCBI_GP:QIE14651.1;Name=QIE14651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301736.1;locus_tag=IXO1088_003130;product=bile acid:sodium symporter;protein_id=QIE14651.1;transl_table=11 CP040687.1 Genbank gene 659101 659367 . + . ID=gene-IXO1088_003135;Name=IXO1088_003135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003135 CP040687.1 GeneMarkS-2+ CDS 659101 659367 . + 0 ID=cds-QIE14652.1;Parent=gene-IXO1088_003135;Dbxref=NCBI_GP:QIE14652.1;Name=QIE14652.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_003135;product=hypothetical protein;protein_id=QIE14652.1;transl_table=11 CP040687.1 Genbank pseudogene 659539 659706 . + . ID=gene-IXO1088_003140;Name=IXO1088_003140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_003140;pseudo=true CP040687.1 Protein Homology CDS 659539 659706 . + 0 ID=cds-IXO1088_003140;Parent=gene-IXO1088_003140;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257114.1;locus_tag=IXO1088_003140;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 659824 661038 . + . ID=gene-IXO1088_003145;Name=IXO1088_003145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003145 CP040687.1 Protein Homology CDS 659824 661038 . + 0 ID=cds-QIE14653.1;Parent=gene-IXO1088_003145;Dbxref=NCBI_GP:QIE14653.1;Name=QIE14653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1088_003145;product=IS4 family transposase;protein_id=QIE14653.1;transl_table=11 CP040687.1 Genbank pseudogene 661058 662281 . + . ID=gene-IXO1088_003150;Name=IXO1088_003150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_003150;pseudo=true CP040687.1 Protein Homology CDS 661058 662281 . + 0 ID=cds-IXO1088_003150;Parent=gene-IXO1088_003150;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_003150;product=IS701-like element ISXo15 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 662431 663399 . + . ID=gene-IXO1088_003155;Name=IXO1088_003155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003155 CP040687.1 Protein Homology CDS 662431 663399 . + 0 ID=cds-QIE14654.1;Parent=gene-IXO1088_003155;Dbxref=NCBI_GP:QIE14654.1;Name=QIE14654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_003155;product=IS5-like element ISXo1 family transposase;protein_id=QIE14654.1;transl_table=11 CP040687.1 Genbank pseudogene 663542 663649 . - . ID=gene-IXO1088_003160;Name=IXO1088_003160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_003160;pseudo=true CP040687.1 Protein Homology CDS 663542 663649 . - 0 ID=cds-IXO1088_003160;Parent=gene-IXO1088_003160;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445108.1;locus_tag=IXO1088_003160;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 663670 665058 . - . ID=gene-IXO1088_003165;Name=IXO1088_003165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003165 CP040687.1 Protein Homology CDS 663670 665058 . - 0 ID=cds-QIE14655.1;Parent=gene-IXO1088_003165;Dbxref=NCBI_GP:QIE14655.1;Name=QIE14655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408780.1;locus_tag=IXO1088_003165;product=IS701 family transposase;protein_id=QIE14655.1;transl_table=11 CP040687.1 Genbank pseudogene 665134 665604 . + . ID=gene-IXO1088_003170;Name=IXO1088_003170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_003170;pseudo=true CP040687.1 Protein Homology CDS 665134 665604 . + 0 ID=cds-IXO1088_003170;Parent=gene-IXO1088_003170;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407232.1;locus_tag=IXO1088_003170;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 665849 666025 . + . ID=gene-IXO1088_003175;Name=IXO1088_003175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_003175;pseudo=true CP040687.1 Protein Homology CDS 665849 666025 . + 0 ID=cds-IXO1088_003175;Parent=gene-IXO1088_003175;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639039.1;locus_tag=IXO1088_003175;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 666138 667154 . - . ID=gene-IXO1088_003180;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=IXO1088_003180 CP040687.1 Protein Homology CDS 666138 667154 . - 0 ID=cds-QIE14656.1;Parent=gene-IXO1088_003180;Dbxref=NCBI_GP:QIE14656.1;Name=QIE14656.1;gbkey=CDS;gene=cydB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639038.1;locus_tag=IXO1088_003180;product=cytochrome d ubiquinol oxidase subunit II;protein_id=QIE14656.1;transl_table=11 CP040687.1 Genbank gene 667145 668545 . - . ID=gene-IXO1088_003185;Name=IXO1088_003185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003185 CP040687.1 Protein Homology CDS 667145 668545 . - 0 ID=cds-QIE14657.1;Parent=gene-IXO1088_003185;Dbxref=NCBI_GP:QIE14657.1;Name=QIE14657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257542.1;locus_tag=IXO1088_003185;product=cytochrome ubiquinol oxidase subunit I;protein_id=QIE14657.1;transl_table=11 CP040687.1 Genbank pseudogene 668856 669136 . - . ID=gene-IXO1088_003190;Name=IXO1088_003190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_003190;pseudo=true CP040687.1 Protein Homology CDS 668856 669136 . - 0 ID=cds-IXO1088_003190;Parent=gene-IXO1088_003190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157410.1;locus_tag=IXO1088_003190;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 669335 669637 . + . ID=gene-IXO1088_003195;Name=IXO1088_003195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_003195;pseudo=true CP040687.1 Protein Homology CDS 669335 669637 . + 0 ID=cds-IXO1088_003195;Parent=gene-IXO1088_003195;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972939.1;locus_tag=IXO1088_003195;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 669670 670950 . + . ID=gene-IXO1088_003200;Name=IXO1088_003200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003200 CP040687.1 Protein Homology CDS 669670 670950 . + 0 ID=cds-QIE14658.1;Parent=gene-IXO1088_003200;Dbxref=NCBI_GP:QIE14658.1;Name=QIE14658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117241.1;locus_tag=IXO1088_003200;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=QIE14658.1;transl_table=11 CP040687.1 Genbank gene 670950 671216 . + . ID=gene-IXO1088_003205;Name=IXO1088_003205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003205 CP040687.1 Protein Homology CDS 670950 671216 . + 0 ID=cds-QIE14659.1;Parent=gene-IXO1088_003205;Dbxref=NCBI_GP:QIE14659.1;Name=QIE14659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257545.1;locus_tag=IXO1088_003205;product=hypothetical protein;protein_id=QIE14659.1;transl_table=11 CP040687.1 Genbank gene 671185 671565 . - . ID=gene-IXO1088_003210;Name=IXO1088_003210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003210 CP040687.1 Protein Homology CDS 671185 671565 . - 0 ID=cds-QIE14660.1;Parent=gene-IXO1088_003210;Dbxref=NCBI_GP:QIE14660.1;Name=QIE14660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157413.1;locus_tag=IXO1088_003210;product=response regulator;protein_id=QIE14660.1;transl_table=11 CP040687.1 Genbank pseudogene 671791 673718 . + . ID=gene-IXO1088_003215;Name=IXO1088_003215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_003215;pseudo=true CP040687.1 Protein Homology CDS 671791 673718 . + 0 ID=cds-IXO1088_003215;Parent=gene-IXO1088_003215;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114624.1;locus_tag=IXO1088_003215;product=methyltransferase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 673805 674907 . + . ID=gene-IXO1088_003220;Name=IXO1088_003220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_003220;pseudo=true CP040687.1 Protein Homology CDS 673805 674907 . + 0 ID=cds-IXO1088_003220;Parent=gene-IXO1088_003220;Note=programmed frameshift%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=IXO1088_003220;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 675040 676359 . - . ID=gene-IXO1088_003225;Name=IXO1088_003225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003225 CP040687.1 Protein Homology CDS 675040 676359 . - 0 ID=cds-QIE14661.1;Parent=gene-IXO1088_003225;Dbxref=NCBI_GP:QIE14661.1;Name=QIE14661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_003225;product=IS701-like element ISXo15 family transposase;protein_id=QIE14661.1;transl_table=11 CP040687.1 Genbank gene 676883 677077 . + . ID=gene-IXO1088_003230;Name=IXO1088_003230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003230 CP040687.1 Protein Homology CDS 676883 677077 . + 0 ID=cds-QIE17846.1;Parent=gene-IXO1088_003230;Dbxref=NCBI_GP:QIE17846.1;Name=QIE17846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365412.1;locus_tag=IXO1088_003230;product=hypothetical protein;protein_id=QIE17846.1;transl_table=11 CP040687.1 Genbank gene 677099 677353 . - . ID=gene-IXO1088_003235;Name=IXO1088_003235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003235 CP040687.1 Protein Homology CDS 677099 677353 . - 0 ID=cds-QIE17847.1;Parent=gene-IXO1088_003235;Dbxref=NCBI_GP:QIE17847.1;Name=QIE17847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301251.1;locus_tag=IXO1088_003235;product=hypothetical protein;protein_id=QIE17847.1;transl_table=11 CP040687.1 Genbank pseudogene 677386 678600 . - . ID=gene-IXO1088_003240;Name=IXO1088_003240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_003240;pseudo=true CP040687.1 Protein Homology CDS 677386 678600 . - 0 ID=cds-IXO1088_003240;Parent=gene-IXO1088_003240;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301250.1;locus_tag=IXO1088_003240;product=FAD-dependent oxidoreductase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 679418 680206 . + . ID=gene-IXO1088_003245;Name=IXO1088_003245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003245 CP040687.1 Protein Homology CDS 679418 680206 . + 0 ID=cds-QIE17848.1;Parent=gene-IXO1088_003245;Dbxref=NCBI_GP:QIE17848.1;Name=QIE17848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052470.1;locus_tag=IXO1088_003245;product=sensor histidine kinase;protein_id=QIE17848.1;transl_table=11 CP040687.1 Genbank gene 680203 680988 . + . ID=gene-IXO1088_003250;Name=IXO1088_003250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003250 CP040687.1 Protein Homology CDS 680203 680988 . + 0 ID=cds-QIE14662.1;Parent=gene-IXO1088_003250;Dbxref=NCBI_GP:QIE14662.1;Name=QIE14662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639022.1;locus_tag=IXO1088_003250;product=response regulator transcription factor;protein_id=QIE14662.1;transl_table=11 CP040687.1 Genbank pseudogene 681162 681523 . + . ID=gene-IXO1088_003255;Name=IXO1088_003255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_003255;pseudo=true CP040687.1 Protein Homology CDS 681162 681523 . + 0 ID=cds-IXO1088_003255;Parent=gene-IXO1088_003255;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850033.1;locus_tag=IXO1088_003255;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 681689 683284 . + . ID=gene-IXO1088_003260;Name=IXO1088_003260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003260 CP040687.1 Protein Homology CDS 681689 683284 . + 0 ID=cds-QIE14663.1;Parent=gene-IXO1088_003260;Dbxref=NCBI_GP:QIE14663.1;Name=QIE14663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639020.1;locus_tag=IXO1088_003260;product=APC family permease;protein_id=QIE14663.1;transl_table=11 CP040687.1 Genbank gene 683422 683498 . + . ID=gene-IXO1088_003265;Name=IXO1088_003265;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_003265 CP040687.1 cmsearch ncRNA 683422 683498 . + . ID=rna-IXO1088_003265;Parent=gene-IXO1088_003265;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_003265;product=sX9 sRNA CP040687.1 cmsearch exon 683422 683498 . + . ID=exon-IXO1088_003265-1;Parent=rna-IXO1088_003265;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_003265;product=sX9 sRNA CP040687.1 Genbank gene 683616 684302 . - . ID=gene-IXO1088_003270;Name=IXO1088_003270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003270 CP040687.1 Protein Homology CDS 683616 684302 . - 0 ID=cds-QIE17849.1;Parent=gene-IXO1088_003270;Dbxref=NCBI_GP:QIE17849.1;Name=QIE17849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172792.1;locus_tag=IXO1088_003270;product=hypothetical protein;protein_id=QIE17849.1;transl_table=11 CP040687.1 Genbank gene 684832 685689 . + . ID=gene-IXO1088_003275;Name=IXO1088_003275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003275 CP040687.1 Protein Homology CDS 684832 685689 . + 0 ID=cds-QIE14664.1;Parent=gene-IXO1088_003275;Dbxref=NCBI_GP:QIE14664.1;Name=QIE14664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407537.1;locus_tag=IXO1088_003275;product=DUF2236 domain-containing protein;protein_id=QIE14664.1;transl_table=11 CP040687.1 Genbank gene 686028 688097 . - . ID=gene-IXO1088_003280;Name=IXO1088_003280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003280 CP040687.1 Protein Homology CDS 686028 688097 . - 0 ID=cds-QIE14665.1;Parent=gene-IXO1088_003280;Dbxref=NCBI_GP:QIE14665.1;Name=QIE14665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116832.1;locus_tag=IXO1088_003280;product=M13 family metallopeptidase;protein_id=QIE14665.1;transl_table=11 CP040687.1 Genbank gene 688248 688943 . - . ID=gene-IXO1088_003285;Name=IXO1088_003285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003285 CP040687.1 Protein Homology CDS 688248 688943 . - 0 ID=cds-QIE14666.1;Parent=gene-IXO1088_003285;Dbxref=NCBI_GP:QIE14666.1;Name=QIE14666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639016.1;locus_tag=IXO1088_003285;product=glycosyltransferase;protein_id=QIE14666.1;transl_table=11 CP040687.1 Genbank gene 688972 689160 . + . ID=gene-IXO1088_003290;Name=IXO1088_003290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003290 CP040687.1 Protein Homology CDS 688972 689160 . + 0 ID=cds-QIE14667.1;Parent=gene-IXO1088_003290;Dbxref=NCBI_GP:QIE14667.1;Name=QIE14667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504758.1;locus_tag=IXO1088_003290;product=hypothetical protein;protein_id=QIE14667.1;transl_table=11 CP040687.1 Genbank gene 689184 690179 . - . ID=gene-IXO1088_003295;Name=IXO1088_003295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003295 CP040687.1 Protein Homology CDS 689184 690179 . - 0 ID=cds-QIE14668.1;Parent=gene-IXO1088_003295;Dbxref=NCBI_GP:QIE14668.1;Name=QIE14668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639015.1;locus_tag=IXO1088_003295;product=aldo/keto reductase;protein_id=QIE14668.1;transl_table=11 CP040687.1 Genbank gene 690319 690888 . - . ID=gene-IXO1088_003300;Name=IXO1088_003300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003300 CP040687.1 Protein Homology CDS 690319 690888 . - 0 ID=cds-QIE14669.1;Parent=gene-IXO1088_003300;Dbxref=NCBI_GP:QIE14669.1;Name=QIE14669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009588901.1;locus_tag=IXO1088_003300;product=flavodoxin family protein;protein_id=QIE14669.1;transl_table=11 CP040687.1 Genbank gene 691004 691282 . + . ID=gene-IXO1088_003305;Name=IXO1088_003305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003305 CP040687.1 Protein Homology CDS 691004 691282 . + 0 ID=cds-QIE14670.1;Parent=gene-IXO1088_003305;Dbxref=NCBI_GP:QIE14670.1;Name=QIE14670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407541.1;locus_tag=IXO1088_003305;product=DoxX family membrane protein;protein_id=QIE14670.1;transl_table=11 CP040687.1 Genbank gene 691380 692198 . + . ID=gene-IXO1088_003310;Name=IXO1088_003310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003310 CP040687.1 Protein Homology CDS 691380 692198 . + 0 ID=cds-QIE14671.1;Parent=gene-IXO1088_003310;Dbxref=NCBI_GP:QIE14671.1;Name=QIE14671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639012.1;locus_tag=IXO1088_003310;product=dioxygenase;protein_id=QIE14671.1;transl_table=11 CP040687.1 Genbank gene 692396 693640 . + . ID=gene-IXO1088_003315;Name=IXO1088_003315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003315 CP040687.1 Protein Homology CDS 692396 693640 . + 0 ID=cds-QIE14672.1;Parent=gene-IXO1088_003315;Dbxref=NCBI_GP:QIE14672.1;Name=QIE14672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639011.1;locus_tag=IXO1088_003315;product=putative DNA modification/repair radical SAM protein;protein_id=QIE14672.1;transl_table=11 CP040687.1 Genbank gene 693647 695095 . + . ID=gene-IXO1088_003320;Name=IXO1088_003320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003320 CP040687.1 Protein Homology CDS 693647 695095 . + 0 ID=cds-QIE14673.1;Parent=gene-IXO1088_003320;Dbxref=NCBI_GP:QIE14673.1;Name=QIE14673.1;Note=This protein belongs to the uracil DNA glycosylase superfamily%2C members of which act in excision repair of DNA. However%2C it belongs more specifically to UdgX branch%2C whose founding member was found to bind uracil in DNA (where it does not belong)%2C without cleaving it%2C appears to promote DNA repair by a pathway involving RecA%2C rather than base excision.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365450.1;locus_tag=IXO1088_003320;product=UdgX family uracil-DNA binding protein;protein_id=QIE14673.1;transl_table=11 CP040687.1 Genbank gene 695327 695403 . + . ID=gene-IXO1088_003325;Name=IXO1088_003325;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_003325 CP040687.1 cmsearch ncRNA 695327 695403 . + . ID=rna-IXO1088_003325;Parent=gene-IXO1088_003325;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_003325;product=sX9 sRNA CP040687.1 cmsearch exon 695327 695403 . + . ID=exon-IXO1088_003325-1;Parent=rna-IXO1088_003325;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_003325;product=sX9 sRNA CP040687.1 Genbank gene 695735 696187 . - . ID=gene-IXO1088_003330;Name=IXO1088_003330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003330 CP040687.1 Protein Homology CDS 695735 696187 . - 0 ID=cds-QIE17850.1;Parent=gene-IXO1088_003330;Dbxref=NCBI_GP:QIE17850.1;Name=QIE17850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639009.1;locus_tag=IXO1088_003330;product=fasciclin domain-containing protein;protein_id=QIE17850.1;transl_table=11 CP040687.1 Genbank gene 696897 697325 . + . ID=gene-IXO1088_003335;Name=IXO1088_003335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003335 CP040687.1 Protein Homology CDS 696897 697325 . + 0 ID=cds-QIE17851.1;Parent=gene-IXO1088_003335;Dbxref=NCBI_GP:QIE17851.1;Name=QIE17851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304093.1;locus_tag=IXO1088_003335;product=hypothetical protein;protein_id=QIE17851.1;transl_table=11 CP040687.1 Genbank gene 697375 697569 . + . ID=gene-IXO1088_003340;Name=IXO1088_003340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003340 CP040687.1 GeneMarkS-2+ CDS 697375 697569 . + 0 ID=cds-QIE14674.1;Parent=gene-IXO1088_003340;Dbxref=NCBI_GP:QIE14674.1;Name=QIE14674.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_003340;product=hypothetical protein;protein_id=QIE14674.1;transl_table=11 CP040687.1 Genbank gene 697800 699437 . + . ID=gene-IXO1088_003345;Name=IXO1088_003345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003345 CP040687.1 Protein Homology CDS 697800 699437 . + 0 ID=cds-QIE14675.1;Parent=gene-IXO1088_003345;Dbxref=NCBI_GP:QIE14675.1;Name=QIE14675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639007.2;locus_tag=IXO1088_003345;product=Na+/H+ antiporter;protein_id=QIE14675.1;transl_table=11 CP040687.1 Genbank gene 699684 700628 . + . ID=gene-IXO1088_003350;Name=IXO1088_003350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003350 CP040687.1 Protein Homology CDS 699684 700628 . + 0 ID=cds-QIE14676.1;Parent=gene-IXO1088_003350;Dbxref=NCBI_GP:QIE14676.1;Name=QIE14676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639006.1;locus_tag=IXO1088_003350;product=ABC transporter ATP-binding protein;protein_id=QIE14676.1;transl_table=11 CP040687.1 Genbank gene 700625 701386 . + . ID=gene-IXO1088_003355;Name=IXO1088_003355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003355 CP040687.1 Protein Homology CDS 700625 701386 . + 0 ID=cds-QIE17852.1;Parent=gene-IXO1088_003355;Dbxref=NCBI_GP:QIE17852.1;Name=QIE17852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639005.1;locus_tag=IXO1088_003355;product=sugar ABC transporter permease;protein_id=QIE17852.1;transl_table=11 CP040687.1 Genbank gene 701800 702066 . - . ID=gene-IXO1088_003360;Name=IXO1088_003360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003360 CP040687.1 Protein Homology CDS 701800 702066 . - 0 ID=cds-QIE14677.1;Parent=gene-IXO1088_003360;Dbxref=NCBI_GP:QIE14677.1;Name=QIE14677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639004.1;locus_tag=IXO1088_003360;product=DUF3297 family protein;protein_id=QIE14677.1;transl_table=11 CP040687.1 Genbank gene 702232 702768 . + . ID=gene-IXO1088_003365;Name=IXO1088_003365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003365 CP040687.1 Protein Homology CDS 702232 702768 . + 0 ID=cds-QIE14678.1;Parent=gene-IXO1088_003365;Dbxref=NCBI_GP:QIE14678.1;Name=QIE14678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009588791.1;locus_tag=IXO1088_003365;product=hypothetical protein;protein_id=QIE14678.1;transl_table=11 CP040687.1 Genbank gene 702887 704794 . - . ID=gene-IXO1088_003370;Name=IXO1088_003370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003370 CP040687.1 Protein Homology CDS 702887 704794 . - 0 ID=cds-QIE14679.1;Parent=gene-IXO1088_003370;Dbxref=NCBI_GP:QIE14679.1;Name=QIE14679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114556.1;locus_tag=IXO1088_003370;product=protease;protein_id=QIE14679.1;transl_table=11 CP040687.1 Genbank gene 704841 707810 . - . ID=gene-IXO1088_003375;Name=IXO1088_003375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003375 CP040687.1 Protein Homology CDS 704841 707810 . - 0 ID=cds-QIE14680.1;Parent=gene-IXO1088_003375;Dbxref=NCBI_GP:QIE14680.1;Name=QIE14680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113609.1;locus_tag=IXO1088_003375;product=adhesin;protein_id=QIE14680.1;transl_table=11 CP040687.1 Genbank gene 708016 709389 . + . ID=gene-IXO1088_003380;Name=IXO1088_003380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003380 CP040687.1 Protein Homology CDS 708016 709389 . + 0 ID=cds-QIE17853.1;Parent=gene-IXO1088_003380;Dbxref=NCBI_GP:QIE17853.1;Name=QIE17853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117894.1;locus_tag=IXO1088_003380;product=two-component sensor histidine kinase;protein_id=QIE17853.1;transl_table=11 CP040687.1 Genbank gene 709371 710099 . - . ID=gene-IXO1088_003385;Name=IXO1088_003385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003385 CP040687.1 Protein Homology CDS 709371 710099 . - 0 ID=cds-QIE14681.1;Parent=gene-IXO1088_003385;Dbxref=NCBI_GP:QIE14681.1;Name=QIE14681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302989.1;locus_tag=IXO1088_003385;product=response regulator transcription factor;protein_id=QIE14681.1;transl_table=11 CP040687.1 Genbank gene 710275 710559 . - . ID=gene-IXO1088_003390;Name=IXO1088_003390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003390 CP040687.1 Protein Homology CDS 710275 710559 . - 0 ID=cds-QIE14682.1;Parent=gene-IXO1088_003390;Dbxref=NCBI_GP:QIE14682.1;Name=QIE14682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504739.1;locus_tag=IXO1088_003390;product=DUF4031 domain-containing protein;protein_id=QIE14682.1;transl_table=11 CP040687.1 Genbank gene 710568 711134 . - . ID=gene-IXO1088_003395;Name=IXO1088_003395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003395 CP040687.1 Protein Homology CDS 710568 711134 . - 0 ID=cds-QIE14683.1;Parent=gene-IXO1088_003395;Dbxref=NCBI_GP:QIE14683.1;Name=QIE14683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372152.1;locus_tag=IXO1088_003395;product=hypothetical protein;protein_id=QIE14683.1;transl_table=11 CP040687.1 Genbank gene 711326 711403 . + . ID=gene-IXO1088_003400;Name=IXO1088_003400;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_003400 CP040687.1 cmsearch ncRNA 711326 711403 . + . ID=rna-IXO1088_003400;Parent=gene-IXO1088_003400;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_003400;product=sX9 sRNA CP040687.1 cmsearch exon 711326 711403 . + . ID=exon-IXO1088_003400-1;Parent=rna-IXO1088_003400;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_003400;product=sX9 sRNA CP040687.1 Genbank gene 711521 712654 . - . ID=gene-IXO1088_003405;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=IXO1088_003405 CP040687.1 Protein Homology CDS 711521 712654 . - 0 ID=cds-QIE14684.1;Parent=gene-IXO1088_003405;Dbxref=NCBI_GP:QIE14684.1;Name=QIE14684.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372148.1;locus_tag=IXO1088_003405;product=flagellar motor protein MotB;protein_id=QIE14684.1;transl_table=11 CP040687.1 Genbank gene 712665 713519 . - . ID=gene-IXO1088_003410;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=IXO1088_003410 CP040687.1 Protein Homology CDS 712665 713519 . - 0 ID=cds-QIE14685.1;Parent=gene-IXO1088_003410;Dbxref=NCBI_GP:QIE14685.1;Name=QIE14685.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303316.1;locus_tag=IXO1088_003410;product=flagellar motor stator protein MotA;protein_id=QIE14685.1;transl_table=11 CP040687.1 Genbank gene 713617 714108 . - . ID=gene-IXO1088_003415;Name=IXO1088_003415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003415 CP040687.1 Protein Homology CDS 713617 714108 . - 0 ID=cds-QIE14686.1;Parent=gene-IXO1088_003415;Dbxref=NCBI_GP:QIE14686.1;Name=QIE14686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157444.1;locus_tag=IXO1088_003415;product=hypothetical protein;protein_id=QIE14686.1;transl_table=11 CP040687.1 Genbank gene 714414 714878 . - . ID=gene-IXO1088_003420;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=IXO1088_003420 CP040687.1 Protein Homology CDS 714414 714878 . - 0 ID=cds-QIE14687.1;Parent=gene-IXO1088_003420;Dbxref=NCBI_GP:QIE14687.1;Name=QIE14687.1;gbkey=CDS;gene=msrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638997.1;locus_tag=IXO1088_003420;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=QIE14687.1;transl_table=11 CP040687.1 Genbank gene 715159 715584 . + . ID=gene-IXO1088_003425;Name=IXO1088_003425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003425 CP040687.1 Protein Homology CDS 715159 715584 . + 0 ID=cds-QIE14688.1;Parent=gene-IXO1088_003425;Dbxref=NCBI_GP:QIE14688.1;Name=QIE14688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157446.1;locus_tag=IXO1088_003425;product=hypothetical protein;protein_id=QIE14688.1;transl_table=11 CP040687.1 Genbank pseudogene 715636 716114 . - . ID=gene-IXO1088_003430;Name=IXO1088_003430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_003430;pseudo=true CP040687.1 Protein Homology CDS 715636 716114 . - 0 ID=cds-IXO1088_003430;Parent=gene-IXO1088_003430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017908762.1;locus_tag=IXO1088_003430;product=AsnC family transcriptional regulator;pseudo=true;transl_table=11 CP040687.1 Genbank gene 716263 717552 . + . ID=gene-IXO1088_003435;Name=IXO1088_003435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003435 CP040687.1 Protein Homology CDS 716263 717552 . + 0 ID=cds-QIE14689.1;Parent=gene-IXO1088_003435;Dbxref=NCBI_GP:QIE14689.1;Name=QIE14689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638994.1;locus_tag=IXO1088_003435;product=D-amino acid dehydrogenase;protein_id=QIE14689.1;transl_table=11 CP040687.1 Genbank gene 717552 718652 . + . ID=gene-IXO1088_003440;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=IXO1088_003440 CP040687.1 Protein Homology CDS 717552 718652 . + 0 ID=cds-QIE14690.1;Parent=gene-IXO1088_003440;Dbxref=NCBI_GP:QIE14690.1;Name=QIE14690.1;gbkey=CDS;gene=alr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504732.1;locus_tag=IXO1088_003440;product=alanine racemase;protein_id=QIE14690.1;transl_table=11 CP040687.1 Genbank gene 719055 719666 . - . ID=gene-IXO1088_003445;Name=IXO1088_003445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003445 CP040687.1 Protein Homology CDS 719055 719666 . - 0 ID=cds-QIE14691.1;Parent=gene-IXO1088_003445;Dbxref=NCBI_GP:QIE14691.1;Name=QIE14691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638992.1;locus_tag=IXO1088_003445;product=DUF3016 domain-containing protein;protein_id=QIE14691.1;transl_table=11 CP040687.1 Genbank gene 719824 720321 . + . ID=gene-IXO1088_003450;Name=IXO1088_003450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003450 CP040687.1 Protein Homology CDS 719824 720321 . + 0 ID=cds-QIE14692.1;Parent=gene-IXO1088_003450;Dbxref=NCBI_GP:QIE14692.1;Name=QIE14692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638991.1;locus_tag=IXO1088_003450;product=hypothetical protein;protein_id=QIE14692.1;transl_table=11 CP040687.1 Genbank gene 720308 720616 . + . ID=gene-IXO1088_003455;Name=IXO1088_003455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003455 CP040687.1 Protein Homology CDS 720308 720616 . + 0 ID=cds-QIE14693.1;Parent=gene-IXO1088_003455;Dbxref=NCBI_GP:QIE14693.1;Name=QIE14693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407559.1;locus_tag=IXO1088_003455;product=hypothetical protein;protein_id=QIE14693.1;transl_table=11 CP040687.1 Genbank gene 720703 722739 . + . ID=gene-IXO1088_003460;Name=IXO1088_003460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003460 CP040687.1 Protein Homology CDS 720703 722739 . + 0 ID=cds-QIE14694.1;Parent=gene-IXO1088_003460;Dbxref=NCBI_GP:QIE14694.1;Name=QIE14694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157452.1;locus_tag=IXO1088_003460;product=PAS domain S-box protein;protein_id=QIE14694.1;transl_table=11 CP040687.1 Genbank gene 723020 723094 . + . ID=gene-IXO1088_003465;Name=IXO1088_003465;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_003465 CP040687.1 cmsearch ncRNA 723020 723094 . + . ID=rna-IXO1088_003465;Parent=gene-IXO1088_003465;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_003465;product=sX9 sRNA CP040687.1 cmsearch exon 723020 723094 . + . ID=exon-IXO1088_003465-1;Parent=rna-IXO1088_003465;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_003465;product=sX9 sRNA CP040687.1 Genbank gene 723224 723532 . + . ID=gene-IXO1088_003470;Name=IXO1088_003470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003470 CP040687.1 Protein Homology CDS 723224 723532 . + 0 ID=cds-QIE14695.1;Parent=gene-IXO1088_003470;Dbxref=NCBI_GP:QIE14695.1;Name=QIE14695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638988.1;locus_tag=IXO1088_003470;product=DUF3247 family protein;protein_id=QIE14695.1;transl_table=11 CP040687.1 Genbank gene 723621 724958 . + . ID=gene-IXO1088_003475;Name=IXO1088_003475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003475 CP040687.1 Protein Homology CDS 723621 724958 . + 0 ID=cds-QIE14696.1;Parent=gene-IXO1088_003475;Dbxref=NCBI_GP:QIE14696.1;Name=QIE14696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638987.1;locus_tag=IXO1088_003475;product=sorbosone dehydrogenase family protein;protein_id=QIE14696.1;transl_table=11 CP040687.1 Genbank gene 724963 725039 . - . ID=gene-IXO1088_003480;Name=IXO1088_003480;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_003480 CP040687.1 cmsearch ncRNA 724963 725039 . - . ID=rna-IXO1088_003480;Parent=gene-IXO1088_003480;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_003480;product=sX9 sRNA CP040687.1 cmsearch exon 724963 725039 . - . ID=exon-IXO1088_003480-1;Parent=rna-IXO1088_003480;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_003480;product=sX9 sRNA CP040687.1 Genbank gene 725519 725806 . - . ID=gene-IXO1088_003485;Name=IXO1088_003485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003485 CP040687.1 Protein Homology CDS 725519 725806 . - 0 ID=cds-QIE14697.1;Parent=gene-IXO1088_003485;Dbxref=NCBI_GP:QIE14697.1;Name=QIE14697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407564.1;locus_tag=IXO1088_003485;product=hypothetical protein;protein_id=QIE14697.1;transl_table=11 CP040687.1 Genbank gene 725952 727019 . + . ID=gene-IXO1088_003490;Name=IXO1088_003490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003490 CP040687.1 Protein Homology CDS 725952 727019 . + 0 ID=cds-QIE14698.1;Parent=gene-IXO1088_003490;Dbxref=NCBI_GP:QIE14698.1;Name=QIE14698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638985.1;locus_tag=IXO1088_003490;product=methyltransferase;protein_id=QIE14698.1;transl_table=11 CP040687.1 Genbank gene 727016 727729 . + . ID=gene-IXO1088_003495;Name=IXO1088_003495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003495 CP040687.1 Protein Homology CDS 727016 727729 . + 0 ID=cds-QIE14699.1;Parent=gene-IXO1088_003495;Dbxref=NCBI_GP:QIE14699.1;Name=QIE14699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638984.1;locus_tag=IXO1088_003495;product=rRNA pseudouridine synthase;protein_id=QIE14699.1;transl_table=11 CP040687.1 Genbank gene 727726 728406 . + . ID=gene-IXO1088_003500;Name=IXO1088_003500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003500 CP040687.1 Protein Homology CDS 727726 728406 . + 0 ID=cds-QIE14700.1;Parent=gene-IXO1088_003500;Dbxref=NCBI_GP:QIE14700.1;Name=QIE14700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304342.1;locus_tag=IXO1088_003500;product=HAD family phosphatase;protein_id=QIE14700.1;transl_table=11 CP040687.1 Genbank gene 728542 729348 . - . ID=gene-IXO1088_003505;Name=IXO1088_003505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003505 CP040687.1 Protein Homology CDS 728542 729348 . - 0 ID=cds-QIE14701.1;Parent=gene-IXO1088_003505;Dbxref=NCBI_GP:QIE14701.1;Name=QIE14701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017164768.1;locus_tag=IXO1088_003505;product=SDR family oxidoreductase;protein_id=QIE14701.1;transl_table=11 CP040687.1 Genbank gene 729770 730330 . - . ID=gene-IXO1088_003510;Name=IXO1088_003510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003510 CP040687.1 Protein Homology CDS 729770 730330 . - 0 ID=cds-QIE14702.1;Parent=gene-IXO1088_003510;Dbxref=NCBI_GP:QIE14702.1;Name=QIE14702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638979.1;locus_tag=IXO1088_003510;product=DUF1415 domain-containing protein;protein_id=QIE14702.1;transl_table=11 CP040687.1 Genbank gene 730489 731352 . - . ID=gene-IXO1088_003515;Name=IXO1088_003515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003515 CP040687.1 Protein Homology CDS 730489 731352 . - 0 ID=cds-QIE14703.1;Parent=gene-IXO1088_003515;Dbxref=NCBI_GP:QIE14703.1;Name=QIE14703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372078.1;locus_tag=IXO1088_003515;product=lysophospholipase;protein_id=QIE14703.1;transl_table=11 CP040687.1 Genbank pseudogene 731339 732476 . - . ID=gene-IXO1088_003520;Name=IXO1088_003520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_003520;pseudo=true CP040687.1 Protein Homology CDS 731339 732476 . - 0 ID=cds-IXO1088_003520;Parent=gene-IXO1088_003520;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005926812.1;locus_tag=IXO1088_003520;product=response regulator;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 732472 732930 . - . ID=gene-IXO1088_003525;Name=IXO1088_003525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_003525;pseudo=true CP040687.1 Protein Homology CDS 732472 732930 . - 0 ID=cds-IXO1088_003525;Parent=gene-IXO1088_003525;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377660.1;locus_tag=IXO1088_003525;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 733076 733561 . - . ID=gene-IXO1088_003530;Name=IXO1088_003530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003530 CP040687.1 Protein Homology CDS 733076 733561 . - 0 ID=cds-QIE14704.1;Parent=gene-IXO1088_003530;Dbxref=NCBI_GP:QIE14704.1;Name=QIE14704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638978.1;locus_tag=IXO1088_003530;product=YajQ family cyclic di-GMP-binding protein;protein_id=QIE14704.1;transl_table=11 CP040687.1 Genbank gene 733669 734565 . + . ID=gene-IXO1088_003535;Name=IXO1088_003535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003535 CP040687.1 Protein Homology CDS 733669 734565 . + 0 ID=cds-QIE14705.1;Parent=gene-IXO1088_003535;Dbxref=NCBI_GP:QIE14705.1;Name=QIE14705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348672.1;locus_tag=IXO1088_003535;product=DMT family transporter;protein_id=QIE14705.1;transl_table=11 CP040687.1 Genbank gene 734684 735691 . + . ID=gene-IXO1088_003540;Name=IXO1088_003540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003540 CP040687.1 Protein Homology CDS 734684 735691 . + 0 ID=cds-QIE17854.1;Parent=gene-IXO1088_003540;Dbxref=NCBI_GP:QIE17854.1;Name=QIE17854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638976.1;locus_tag=IXO1088_003540;product=methionine ABC transporter ATP-binding protein;protein_id=QIE17854.1;transl_table=11 CP040687.1 Genbank gene 735688 736383 . + . ID=gene-IXO1088_003545;Name=IXO1088_003545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003545 CP040687.1 Protein Homology CDS 735688 736383 . + 0 ID=cds-QIE14706.1;Parent=gene-IXO1088_003545;Dbxref=NCBI_GP:QIE14706.1;Name=QIE14706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638975.1;locus_tag=IXO1088_003545;product=ABC transporter permease;protein_id=QIE14706.1;transl_table=11 CP040687.1 Genbank gene 736478 737278 . + . ID=gene-IXO1088_003550;Name=IXO1088_003550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003550 CP040687.1 Protein Homology CDS 736478 737278 . + 0 ID=cds-QIE14707.1;Parent=gene-IXO1088_003550;Dbxref=NCBI_GP:QIE14707.1;Name=QIE14707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638974.1;locus_tag=IXO1088_003550;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=QIE14707.1;transl_table=11 CP040687.1 Genbank gene 737655 738212 . + . ID=gene-IXO1088_003555;Name=IXO1088_003555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003555 CP040687.1 Protein Homology CDS 737655 738212 . + 0 ID=cds-QIE14708.1;Parent=gene-IXO1088_003555;Dbxref=NCBI_GP:QIE14708.1;Name=QIE14708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635928.1;locus_tag=IXO1088_003555;product=DUF1453 family protein;protein_id=QIE14708.1;transl_table=11 CP040687.1 Genbank gene 738497 739183 . - . ID=gene-IXO1088_003560;Name=IXO1088_003560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003560 CP040687.1 Protein Homology CDS 738497 739183 . - 0 ID=cds-QIE14709.1;Parent=gene-IXO1088_003560;Dbxref=NCBI_GP:QIE14709.1;Name=QIE14709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635931.1;locus_tag=IXO1088_003560;product=OmpW family protein;protein_id=QIE14709.1;transl_table=11 CP040687.1 Genbank gene 739325 739885 . + . ID=gene-IXO1088_003565;Name=IXO1088_003565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003565 CP040687.1 Protein Homology CDS 739325 739885 . + 0 ID=cds-QIE14710.1;Parent=gene-IXO1088_003565;Dbxref=NCBI_GP:QIE14710.1;Name=QIE14710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257611.1;locus_tag=IXO1088_003565;product=DNA-deoxyinosine glycosylase;protein_id=QIE14710.1;transl_table=11 CP040687.1 Genbank gene 740067 740825 . + . ID=gene-IXO1088_003570;Name=IXO1088_003570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003570 CP040687.1 Protein Homology CDS 740067 740825 . + 0 ID=cds-QIE14711.1;Parent=gene-IXO1088_003570;Dbxref=NCBI_GP:QIE14711.1;Name=QIE14711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007962078.1;locus_tag=IXO1088_003570;product=DUF2884 family protein;protein_id=QIE14711.1;transl_table=11 CP040687.1 Genbank gene 740955 742751 . + . ID=gene-IXO1088_003575;Name=IXO1088_003575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003575 CP040687.1 Protein Homology CDS 740955 742751 . + 0 ID=cds-QIE14712.1;Parent=gene-IXO1088_003575;Dbxref=NCBI_GP:QIE14712.1;Name=QIE14712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974307.1;locus_tag=IXO1088_003575;product=dihydrolipoyllysine-residue acetyltransferase;protein_id=QIE14712.1;transl_table=11 CP040687.1 Genbank gene 742748 743395 . + . ID=gene-IXO1088_003580;Name=IXO1088_003580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003580 CP040687.1 Protein Homology CDS 742748 743395 . + 0 ID=cds-QIE14713.1;Parent=gene-IXO1088_003580;Dbxref=NCBI_GP:QIE14713.1;Name=QIE14713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635935.1;locus_tag=IXO1088_003580;product=hypothetical protein;protein_id=QIE14713.1;transl_table=11 CP040687.1 Genbank gene 743412 745235 . + . ID=gene-IXO1088_003585;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=IXO1088_003585 CP040687.1 Protein Homology CDS 743412 745235 . + 0 ID=cds-QIE14714.1;Parent=gene-IXO1088_003585;Dbxref=NCBI_GP:QIE14714.1;Name=QIE14714.1;gbkey=CDS;gene=lpdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635936.1;locus_tag=IXO1088_003585;product=dihydrolipoyl dehydrogenase;protein_id=QIE14714.1;transl_table=11 CP040687.1 Genbank gene 745297 745587 . + . ID=gene-IXO1088_003590;Name=IXO1088_003590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003590 CP040687.1 Protein Homology CDS 745297 745587 . + 0 ID=cds-QIE14715.1;Parent=gene-IXO1088_003590;Dbxref=NCBI_GP:QIE14715.1;Name=QIE14715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017910286.1;locus_tag=IXO1088_003590;product=hypothetical protein;protein_id=QIE14715.1;transl_table=11 CP040687.1 Genbank gene 745726 746430 . - . ID=gene-IXO1088_003595;Name=IXO1088_003595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003595 CP040687.1 Protein Homology CDS 745726 746430 . - 0 ID=cds-QIE17855.1;Parent=gene-IXO1088_003595;Dbxref=NCBI_GP:QIE17855.1;Name=QIE17855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635938.1;locus_tag=IXO1088_003595;product=hypothetical protein;protein_id=QIE17855.1;transl_table=11 CP040687.1 Genbank gene 747071 747436 . + . ID=gene-IXO1088_003600;Name=IXO1088_003600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003600 CP040687.1 Protein Homology CDS 747071 747436 . + 0 ID=cds-QIE14716.1;Parent=gene-IXO1088_003600;Dbxref=NCBI_GP:QIE14716.1;Name=QIE14716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635939.1;locus_tag=IXO1088_003600;product=hypothetical protein;protein_id=QIE14716.1;transl_table=11 CP040687.1 Genbank gene 747462 748262 . + . ID=gene-IXO1088_003605;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=IXO1088_003605 CP040687.1 Protein Homology CDS 747462 748262 . + 0 ID=cds-QIE14717.1;Parent=gene-IXO1088_003605;Dbxref=NCBI_GP:QIE14717.1;Name=QIE14717.1;gbkey=CDS;gene=atpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635940.1;locus_tag=IXO1088_003605;product=F0F1 ATP synthase subunit A;protein_id=QIE14717.1;transl_table=11 CP040687.1 Genbank gene 748335 748637 . + . ID=gene-IXO1088_003610;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=IXO1088_003610 CP040687.1 Protein Homology CDS 748335 748637 . + 0 ID=cds-QIE14718.1;Parent=gene-IXO1088_003610;Dbxref=NCBI_GP:QIE14718.1;Name=QIE14718.1;gbkey=CDS;gene=atpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635941.1;locus_tag=IXO1088_003610;product=F0F1 ATP synthase subunit C;protein_id=QIE14718.1;transl_table=11 CP040687.1 Genbank gene 748752 749222 . + . ID=gene-IXO1088_003615;Name=IXO1088_003615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003615 CP040687.1 Protein Homology CDS 748752 749222 . + 0 ID=cds-QIE14719.1;Parent=gene-IXO1088_003615;Dbxref=NCBI_GP:QIE14719.1;Name=QIE14719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635942.1;locus_tag=IXO1088_003615;product=F0F1 ATP synthase subunit B;protein_id=QIE14719.1;transl_table=11 CP040687.1 Genbank gene 749226 749753 . + . ID=gene-IXO1088_003620;Name=IXO1088_003620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003620 CP040687.1 Protein Homology CDS 749226 749753 . + 0 ID=cds-QIE14720.1;Parent=gene-IXO1088_003620;Dbxref=NCBI_GP:QIE14720.1;Name=QIE14720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635943.1;locus_tag=IXO1088_003620;product=F0F1 ATP synthase subunit delta;protein_id=QIE14720.1;transl_table=11 CP040687.1 Genbank gene 749801 751348 . + . ID=gene-IXO1088_003625;Name=IXO1088_003625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003625 CP040687.1 Protein Homology CDS 749801 751348 . + 0 ID=cds-QIE14721.1;Parent=gene-IXO1088_003625;Dbxref=NCBI_GP:QIE14721.1;Name=QIE14721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014161761.1;locus_tag=IXO1088_003625;product=F0F1 ATP synthase subunit alpha;protein_id=QIE14721.1;transl_table=11 CP040687.1 Genbank gene 751542 752405 . + . ID=gene-IXO1088_003630;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=IXO1088_003630 CP040687.1 Protein Homology CDS 751542 752405 . + 0 ID=cds-QIE14722.1;Parent=gene-IXO1088_003630;Dbxref=NCBI_GP:QIE14722.1;Name=QIE14722.1;gbkey=CDS;gene=atpG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371995.1;locus_tag=IXO1088_003630;product=F0F1 ATP synthase subunit gamma;protein_id=QIE14722.1;transl_table=11 CP040687.1 Genbank gene 752550 753956 . + . ID=gene-IXO1088_003635;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=IXO1088_003635 CP040687.1 Protein Homology CDS 752550 753956 . + 0 ID=cds-QIE14723.1;Parent=gene-IXO1088_003635;Dbxref=NCBI_GP:QIE14723.1;Name=QIE14723.1;gbkey=CDS;gene=atpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635946.1;locus_tag=IXO1088_003635;product=F0F1 ATP synthase subunit beta;protein_id=QIE14723.1;transl_table=11 CP040687.1 Genbank gene 754100 754522 . + . ID=gene-IXO1088_003640;Name=IXO1088_003640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003640 CP040687.1 Protein Homology CDS 754100 754522 . + 0 ID=cds-QIE14724.1;Parent=gene-IXO1088_003640;Dbxref=NCBI_GP:QIE14724.1;Name=QIE14724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635947.1;locus_tag=IXO1088_003640;product=F0F1 ATP synthase subunit epsilon;protein_id=QIE14724.1;transl_table=11 CP040687.1 Genbank gene 754754 755323 . + . ID=gene-IXO1088_003645;Name=IXO1088_003645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003645 CP040687.1 Protein Homology CDS 754754 755323 . + 0 ID=cds-QIE14725.1;Parent=gene-IXO1088_003645;Dbxref=NCBI_GP:QIE14725.1;Name=QIE14725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371987.1;locus_tag=IXO1088_003645;product=chorismate mutase;protein_id=QIE14725.1;transl_table=11 CP040687.1 Genbank gene 755846 756229 . - . ID=gene-IXO1088_003650;Name=IXO1088_003650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003650 CP040687.1 Protein Homology CDS 755846 756229 . - 0 ID=cds-QIE14726.1;Parent=gene-IXO1088_003650;Dbxref=NCBI_GP:QIE14726.1;Name=QIE14726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484015.1;locus_tag=IXO1088_003650;product=GtrA family protein;protein_id=QIE14726.1;transl_table=11 CP040687.1 Genbank gene 756374 757738 . + . ID=gene-IXO1088_003655;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=IXO1088_003655 CP040687.1 Protein Homology CDS 756374 757738 . + 0 ID=cds-QIE14727.1;Parent=gene-IXO1088_003655;Dbxref=NCBI_GP:QIE14727.1;Name=QIE14727.1;gbkey=CDS;gene=glmU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635950.1;locus_tag=IXO1088_003655;product=UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase;protein_id=QIE14727.1;transl_table=11 CP040687.1 Genbank pseudogene 758066 758224 . - . ID=gene-IXO1088_003660;Name=IXO1088_003660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_003660;pseudo=true CP040687.1 Protein Homology CDS 758066 758224 . - 0 ID=cds-IXO1088_003660;Parent=gene-IXO1088_003660;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005926625.1;locus_tag=IXO1088_003660;product=ATP-binding protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 758273 758446 . + . ID=gene-IXO1088_003665;Name=IXO1088_003665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_003665;pseudo=true CP040687.1 Protein Homology CDS 758273 758446 . + 0 ID=cds-IXO1088_003665;Parent=gene-IXO1088_003665;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_003665;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 758464 759429 . - . ID=gene-IXO1088_003670;Name=IXO1088_003670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003670 CP040687.1 Protein Homology CDS 758464 759429 . - 0 ID=cds-QIE14728.1;Parent=gene-IXO1088_003670;Dbxref=NCBI_GP:QIE14728.1;Name=QIE14728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_003670;product=IS1595-like element ISXo5 family transposase;protein_id=QIE14728.1;transl_table=11 CP040687.1 Genbank pseudogene 759513 760102 . + . ID=gene-IXO1088_003675;Name=IXO1088_003675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_003675;pseudo=true CP040687.1 Protein Homology CDS 759513 760102 . + 0 ID=cds-IXO1088_003675;Parent=gene-IXO1088_003675;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_003675;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 760416 761651 . + . ID=gene-IXO1088_003680;Name=IXO1088_003680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003680 CP040687.1 Protein Homology CDS 760416 761651 . + 0 ID=cds-QIE14729.1;Parent=gene-IXO1088_003680;Dbxref=NCBI_GP:QIE14729.1;Name=QIE14729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1088_003680;product=ISL3-like element ISXoo13 family transposase;protein_id=QIE14729.1;transl_table=11 CP040687.1 Genbank pseudogene 761659 761808 . - . ID=gene-IXO1088_003685;Name=IXO1088_003685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_003685;pseudo=true CP040687.1 Protein Homology CDS 761659 761808 . - 0 ID=cds-IXO1088_003685;Parent=gene-IXO1088_003685;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635959.1;locus_tag=IXO1088_003685;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 761857 763128 . - . ID=gene-IXO1088_003690;Name=IXO1088_003690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003690 CP040687.1 Protein Homology CDS 761857 763128 . - 0 ID=cds-QIE17856.1;Parent=gene-IXO1088_003690;Dbxref=NCBI_GP:QIE17856.1;Name=QIE17856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635960.1;locus_tag=IXO1088_003690;product=efflux RND transporter periplasmic adaptor subunit;protein_id=QIE17856.1;transl_table=11 CP040687.1 Genbank gene 763336 765165 . + . ID=gene-IXO1088_003695;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=IXO1088_003695 CP040687.1 Protein Homology CDS 763336 765165 . + 0 ID=cds-QIE14730.1;Parent=gene-IXO1088_003695;Dbxref=NCBI_GP:QIE14730.1;Name=QIE14730.1;gbkey=CDS;gene=glmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635961.1;locus_tag=IXO1088_003695;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=QIE14730.1;transl_table=11 CP040687.1 Genbank gene 765547 766020 . + . ID=gene-IXO1088_003700;Name=IXO1088_003700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003700 CP040687.1 Protein Homology CDS 765547 766020 . + 0 ID=cds-QIE14731.1;Parent=gene-IXO1088_003700;Dbxref=NCBI_GP:QIE14731.1;Name=QIE14731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506523.1;locus_tag=IXO1088_003700;product=hypothetical protein;protein_id=QIE14731.1;transl_table=11 CP040687.1 Genbank gene 766252 766827 . + . ID=gene-IXO1088_003705;Name=IXO1088_003705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003705 CP040687.1 Protein Homology CDS 766252 766827 . + 0 ID=cds-QIE14732.1;Parent=gene-IXO1088_003705;Dbxref=NCBI_GP:QIE14732.1;Name=QIE14732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446126.1;locus_tag=IXO1088_003705;product=hypothetical protein;protein_id=QIE14732.1;transl_table=11 CP040687.1 Genbank gene 766860 767623 . + . ID=gene-IXO1088_003710;Name=IXO1088_003710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003710 CP040687.1 Protein Homology CDS 766860 767175 . + 0 ID=cds-QIE14733.1;Parent=gene-IXO1088_003710;Dbxref=NCBI_GP:QIE14733.1;Name=QIE14733.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_003710;product=IS5 family transposase;protein_id=QIE14733.1;transl_table=11 CP040687.1 Protein Homology CDS 767175 767623 . + 2 ID=cds-QIE14733.1;Parent=gene-IXO1088_003710;Dbxref=NCBI_GP:QIE14733.1;Name=QIE14733.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_003710;product=IS5 family transposase;protein_id=QIE14733.1;transl_table=11 CP040687.1 Genbank gene 767747 767823 . + . ID=gene-IXO1088_003715;Name=IXO1088_003715;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_003715 CP040687.1 cmsearch ncRNA 767747 767823 . + . ID=rna-IXO1088_003715;Parent=gene-IXO1088_003715;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_003715;product=sX9 sRNA CP040687.1 cmsearch exon 767747 767823 . + . ID=exon-IXO1088_003715-1;Parent=rna-IXO1088_003715;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_003715;product=sX9 sRNA CP040687.1 Genbank gene 767874 768398 . - . ID=gene-IXO1088_003720;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=IXO1088_003720 CP040687.1 Protein Homology CDS 767874 768398 . - 0 ID=cds-QIE14734.1;Parent=gene-IXO1088_003720;Dbxref=NCBI_GP:QIE14734.1;Name=QIE14734.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635967.1;locus_tag=IXO1088_003720;product=lactoylglutathione lyase;protein_id=QIE14734.1;transl_table=11 CP040687.1 Genbank gene 768555 769661 . - . ID=gene-IXO1088_003725;Name=IXO1088_003725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003725 CP040687.1 Protein Homology CDS 768555 769661 . - 0 ID=cds-QIE14735.1;Parent=gene-IXO1088_003725;Dbxref=NCBI_GP:QIE14735.1;Name=QIE14735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371942.1;locus_tag=IXO1088_003725;product=copper resistance protein B;protein_id=QIE14735.1;transl_table=11 CP040687.1 Genbank gene 769658 771487 . - . ID=gene-IXO1088_003730;Name=IXO1088_003730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003730 CP040687.1 Protein Homology CDS 769658 771487 . - 0 ID=cds-QIE14736.1;Parent=gene-IXO1088_003730;Dbxref=NCBI_GP:QIE14736.1;Name=QIE14736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091111.1;locus_tag=IXO1088_003730;product=copper resistance system multicopper oxidase;protein_id=QIE14736.1;transl_table=11 CP040687.1 Genbank gene 771574 771990 . - . ID=gene-IXO1088_003735;Name=IXO1088_003735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003735 CP040687.1 Protein Homology CDS 771574 771990 . - 0 ID=cds-QIE14737.1;Parent=gene-IXO1088_003735;Dbxref=NCBI_GP:QIE14737.1;Name=QIE14737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377717.1;locus_tag=IXO1088_003735;product=CopL family metal-binding regulatory protein;protein_id=QIE14737.1;transl_table=11 CP040687.1 Genbank gene 772126 773229 . + . ID=gene-IXO1088_003740;Name=IXO1088_003740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003740 CP040687.1 Protein Homology CDS 772126 773229 . + 0 ID=cds-QIE14738.1;Parent=gene-IXO1088_003740;Dbxref=NCBI_GP:QIE14738.1;Name=QIE14738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635971.1;locus_tag=IXO1088_003740;product=PLP-dependent cysteine synthase family protein;protein_id=QIE14738.1;transl_table=11 CP040687.1 Genbank gene 773273 775297 . + . ID=gene-IXO1088_003745;Name=IXO1088_003745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003745 CP040687.1 Protein Homology CDS 773273 775297 . + 0 ID=cds-QIE14739.1;Parent=gene-IXO1088_003745;Dbxref=NCBI_GP:QIE14739.1;Name=QIE14739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635972.1;locus_tag=IXO1088_003745;product=M3 family metallopeptidase;protein_id=QIE14739.1;transl_table=11 CP040687.1 Genbank gene 775471 776292 . + . ID=gene-IXO1088_003750;Name=IXO1088_003750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003750 CP040687.1 Protein Homology CDS 775471 776292 . + 0 ID=cds-QIE14740.1;Parent=gene-IXO1088_003750;Dbxref=NCBI_GP:QIE14740.1;Name=QIE14740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504674.1;locus_tag=IXO1088_003750;product=hypothetical protein;protein_id=QIE14740.1;transl_table=11 CP040687.1 Genbank gene 776406 777614 . - . ID=gene-IXO1088_003755;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=IXO1088_003755 CP040687.1 Protein Homology CDS 776406 777614 . - 0 ID=cds-QIE14741.1;Parent=gene-IXO1088_003755;Dbxref=NCBI_GP:QIE14741.1;Name=QIE14741.1;gbkey=CDS;gene=fabB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635973.1;locus_tag=IXO1088_003755;product=beta-ketoacyl-ACP synthase I;protein_id=QIE14741.1;transl_table=11 CP040687.1 Genbank gene 777614 778129 . - . ID=gene-IXO1088_003760;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=IXO1088_003760 CP040687.1 Protein Homology CDS 777614 778129 . - 0 ID=cds-QIE14742.1;Parent=gene-IXO1088_003760;Dbxref=NCBI_GP:QIE14742.1;Name=QIE14742.1;gbkey=CDS;gene=fabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635974.1;locus_tag=IXO1088_003760;product=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA;protein_id=QIE14742.1;transl_table=11 CP040687.1 Genbank gene 778128 778475 . + . ID=gene-IXO1088_003765;Name=IXO1088_003765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003765 CP040687.1 Protein Homology CDS 778128 778475 . + 0 ID=cds-QIE14743.1;Parent=gene-IXO1088_003765;Dbxref=NCBI_GP:QIE14743.1;Name=QIE14743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371922.1;locus_tag=IXO1088_003765;product=hypothetical protein;protein_id=QIE14743.1;transl_table=11 CP040687.1 Genbank gene 778475 779554 . + . ID=gene-IXO1088_003770;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=IXO1088_003770 CP040687.1 Protein Homology CDS 778475 779554 . + 0 ID=cds-QIE14744.1;Parent=gene-IXO1088_003770;Dbxref=NCBI_GP:QIE14744.1;Name=QIE14744.1;gbkey=CDS;gene=dinB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371921.1;locus_tag=IXO1088_003770;product=DNA polymerase IV;protein_id=QIE14744.1;transl_table=11 CP040687.1 Genbank gene 779696 780346 . + . ID=gene-IXO1088_003775;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=IXO1088_003775 CP040687.1 Protein Homology CDS 779696 780346 . + 0 ID=cds-QIE14745.1;Parent=gene-IXO1088_003775;Dbxref=NCBI_GP:QIE14745.1;Name=QIE14745.1;Note=PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (PF00702).;gbkey=CDS;gene=gph;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407595.1;locus_tag=IXO1088_003775;product=phosphoglycolate phosphatase;protein_id=QIE14745.1;transl_table=11 CP040687.1 Genbank gene 780658 781056 . - . ID=gene-IXO1088_003780;Name=IXO1088_003780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003780 CP040687.1 Protein Homology CDS 780658 781056 . - 0 ID=cds-QIE14746.1;Parent=gene-IXO1088_003780;Dbxref=NCBI_GP:QIE14746.1;Name=QIE14746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301376.1;locus_tag=IXO1088_003780;product=TfoX/Sxy family protein;protein_id=QIE14746.1;transl_table=11 CP040687.1 Genbank gene 781053 781535 . - . ID=gene-IXO1088_003785;Name=IXO1088_003785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003785 CP040687.1 Protein Homology CDS 781053 781535 . - 0 ID=cds-QIE14747.1;Parent=gene-IXO1088_003785;Dbxref=NCBI_GP:QIE14747.1;Name=QIE14747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407596.1;locus_tag=IXO1088_003785;product=GAF domain-containing protein;protein_id=QIE14747.1;transl_table=11 CP040687.1 Genbank gene 781860 782534 . + . ID=gene-IXO1088_003790;Name=IXO1088_003790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003790 CP040687.1 Protein Homology CDS 781860 782534 . + 0 ID=cds-QIE14748.1;Parent=gene-IXO1088_003790;Dbxref=NCBI_GP:QIE14748.1;Name=QIE14748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635979.1;locus_tag=IXO1088_003790;product=ATP-dependent dethiobiotin synthetase BioD;protein_id=QIE14748.1;transl_table=11 CP040687.1 Genbank gene 782649 782984 . - . ID=gene-IXO1088_003795;Name=IXO1088_003795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003795 CP040687.1 Protein Homology CDS 782649 782984 . - 0 ID=cds-QIE17857.1;Parent=gene-IXO1088_003795;Dbxref=NCBI_GP:QIE17857.1;Name=QIE17857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635980.1;locus_tag=IXO1088_003795;product=hypothetical protein;protein_id=QIE17857.1;transl_table=11 CP040687.1 Genbank gene 783177 783530 . - . ID=gene-IXO1088_003800;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=IXO1088_003800 CP040687.1 Protein Homology CDS 783177 783530 . - 0 ID=cds-QIE14749.1;Parent=gene-IXO1088_003800;Dbxref=NCBI_GP:QIE14749.1;Name=QIE14749.1;gbkey=CDS;gene=queD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635981.1;locus_tag=IXO1088_003800;product=6-carboxytetrahydropterin synthase QueD;protein_id=QIE14749.1;transl_table=11 CP040687.1 Genbank gene 783492 783671 . + . ID=gene-IXO1088_003805;Name=IXO1088_003805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003805 CP040687.1 Protein Homology CDS 783492 783671 . + 0 ID=cds-QIE14750.1;Parent=gene-IXO1088_003805;Dbxref=NCBI_GP:QIE14750.1;Name=QIE14750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504666.1;locus_tag=IXO1088_003805;product=GTP-binding protein;protein_id=QIE14750.1;transl_table=11 CP040687.1 Genbank gene 783943 785325 . - . ID=gene-IXO1088_003810;Name=IXO1088_003810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003810 CP040687.1 Protein Homology CDS 783943 785325 . - 0 ID=cds-QIE14751.1;Parent=gene-IXO1088_003810;Dbxref=NCBI_GP:QIE14751.1;Name=QIE14751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446112.1;locus_tag=IXO1088_003810;product=DEAD/DEAH box helicase;protein_id=QIE14751.1;transl_table=11 CP040687.1 Genbank gene 785418 785543 . + . ID=gene-IXO1088_003815;Name=IXO1088_003815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003815 CP040687.1 Protein Homology CDS 785418 785543 . + 0 ID=cds-QIE14752.1;Parent=gene-IXO1088_003815;Dbxref=NCBI_GP:QIE14752.1;Name=QIE14752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301777.1;locus_tag=IXO1088_003815;product=fumarylacetoacetate hydrolase;protein_id=QIE14752.1;transl_table=11 CP040687.1 Genbank gene 785705 786694 . + . ID=gene-IXO1088_003820;Name=IXO1088_003820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003820 CP040687.1 Protein Homology CDS 785705 786694 . + 0 ID=cds-QIE14753.1;Parent=gene-IXO1088_003820;Dbxref=NCBI_GP:QIE14753.1;Name=QIE14753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635983.1;locus_tag=IXO1088_003820;product=FAA hydrolase family protein;protein_id=QIE14753.1;transl_table=11 CP040687.1 Genbank gene 786738 787400 . + . ID=gene-IXO1088_003825;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=IXO1088_003825 CP040687.1 Protein Homology CDS 786738 787400 . + 0 ID=cds-QIE14754.1;Parent=gene-IXO1088_003825;Dbxref=NCBI_GP:QIE14754.1;Name=QIE14754.1;gbkey=CDS;gene=maiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635984.1;locus_tag=IXO1088_003825;product=maleylacetoacetate isomerase;protein_id=QIE14754.1;transl_table=11 CP040687.1 Genbank gene 787739 788878 . - . ID=gene-IXO1088_003830;Name=IXO1088_003830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003830 CP040687.1 Protein Homology CDS 787739 788878 . - 0 ID=cds-QIE14755.1;Parent=gene-IXO1088_003830;Dbxref=NCBI_GP:QIE14755.1;Name=QIE14755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635985.1;locus_tag=IXO1088_003830;product=PilT/PilU family type 4a pilus ATPase;protein_id=QIE14755.1;transl_table=11 CP040687.1 Genbank gene 788971 789354 . + . ID=gene-IXO1088_003835;Name=IXO1088_003835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003835 CP040687.1 Protein Homology CDS 788971 789354 . + 0 ID=cds-QIE14756.1;Parent=gene-IXO1088_003835;Dbxref=NCBI_GP:QIE14756.1;Name=QIE14756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635986.1;locus_tag=IXO1088_003835;product=DUF4398 domain-containing protein;protein_id=QIE14756.1;transl_table=11 CP040687.1 Genbank gene 789351 790241 . + . ID=gene-IXO1088_003840;Name=IXO1088_003840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003840 CP040687.1 Protein Homology CDS 789351 790241 . + 0 ID=cds-QIE14757.1;Parent=gene-IXO1088_003840;Dbxref=NCBI_GP:QIE14757.1;Name=QIE14757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635987.1;locus_tag=IXO1088_003840;product=hypothetical protein;protein_id=QIE14757.1;transl_table=11 CP040687.1 Genbank gene 790583 790801 . + . ID=gene-IXO1088_003845;Name=IXO1088_003845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003845 CP040687.1 Protein Homology CDS 790583 790801 . + 0 ID=cds-QIE14758.1;Parent=gene-IXO1088_003845;Dbxref=NCBI_GP:QIE14758.1;Name=QIE14758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237985.1;locus_tag=IXO1088_003845;product=DUF465 domain-containing protein;protein_id=QIE14758.1;transl_table=11 CP040687.1 Genbank gene 791043 792413 . + . ID=gene-IXO1088_003850;Name=IXO1088_003850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003850 CP040687.1 Protein Homology CDS 791043 792413 . + 0 ID=cds-QIE14759.1;Parent=gene-IXO1088_003850;Dbxref=NCBI_GP:QIE14759.1;Name=QIE14759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157251.1;locus_tag=IXO1088_003850;product=pyridoxal-phosphate dependent enzyme;protein_id=QIE14759.1;transl_table=11 CP040687.1 Genbank gene 792504 793697 . + . ID=gene-IXO1088_003855;Name=IXO1088_003855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003855 CP040687.1 Protein Homology CDS 792504 793697 . + 0 ID=cds-QIE14760.1;Parent=gene-IXO1088_003855;Dbxref=NCBI_GP:QIE14760.1;Name=QIE14760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301785.1;locus_tag=IXO1088_003855;product=cystathionine gamma-synthase;protein_id=QIE14760.1;transl_table=11 CP040687.1 Genbank gene 793744 794544 . + . ID=gene-IXO1088_003860;Name=IXO1088_003860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003860 CP040687.1 Protein Homology CDS 793744 794544 . + 0 ID=cds-QIE14761.1;Parent=gene-IXO1088_003860;Dbxref=NCBI_GP:QIE14761.1;Name=QIE14761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446105.1;locus_tag=IXO1088_003860;product=FkbM family methyltransferase;protein_id=QIE14761.1;transl_table=11 CP040687.1 Genbank gene 794579 795655 . + . ID=gene-IXO1088_003865;Name=IXO1088_003865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003865 CP040687.1 Protein Homology CDS 794579 795655 . + 0 ID=cds-QIE14762.1;Parent=gene-IXO1088_003865;Dbxref=NCBI_GP:QIE14762.1;Name=QIE14762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407605.1;locus_tag=IXO1088_003865;product=NAD-dependent epimerase/dehydratase family protein;protein_id=QIE14762.1;transl_table=11 CP040687.1 Genbank gene 796687 797613 . + . ID=gene-IXO1088_003870;Name=IXO1088_003870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003870 CP040687.1 Protein Homology CDS 796687 797613 . + 0 ID=cds-QIE17858.1;Parent=gene-IXO1088_003870;Dbxref=NCBI_GP:QIE17858.1;Name=QIE17858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301789.1;locus_tag=IXO1088_003870;product=glycosyltransferase family 4 protein;protein_id=QIE17858.1;transl_table=11 CP040687.1 Genbank gene 797634 797924 . + . ID=gene-IXO1088_003875;Name=IXO1088_003875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003875 CP040687.1 Protein Homology CDS 797634 797924 . + 0 ID=cds-QIE14763.1;Parent=gene-IXO1088_003875;Dbxref=NCBI_GP:QIE14763.1;Name=QIE14763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008216416.1;locus_tag=IXO1088_003875;product=hypothetical protein;protein_id=QIE14763.1;transl_table=11 CP040687.1 Genbank gene 797915 799078 . + . ID=gene-IXO1088_003880;Name=IXO1088_003880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003880 CP040687.1 Protein Homology CDS 797915 799078 . + 0 ID=cds-QIE14764.1;Parent=gene-IXO1088_003880;Dbxref=NCBI_GP:QIE14764.1;Name=QIE14764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257668.1;locus_tag=IXO1088_003880;product=glycosyltransferase family 2 protein;protein_id=QIE14764.1;transl_table=11 CP040687.1 Genbank gene 799084 800136 . + . ID=gene-IXO1088_003885;Name=IXO1088_003885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003885 CP040687.1 Protein Homology CDS 799084 800136 . + 0 ID=cds-QIE14765.1;Parent=gene-IXO1088_003885;Dbxref=NCBI_GP:QIE14765.1;Name=QIE14765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257669.1;locus_tag=IXO1088_003885;product=acyltransferase;protein_id=QIE14765.1;transl_table=11 CP040687.1 Genbank gene 800164 801120 . - . ID=gene-IXO1088_003890;Name=IXO1088_003890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003890 CP040687.1 Protein Homology CDS 800164 801120 . - 0 ID=cds-QIE14766.1;Parent=gene-IXO1088_003890;Dbxref=NCBI_GP:QIE14766.1;Name=QIE14766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=IXO1088_003890;product=IS30-like element IS1112a family transposase;protein_id=QIE14766.1;transl_table=11 CP040687.1 Genbank gene 801282 802601 . + . ID=gene-IXO1088_003895;Name=IXO1088_003895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003895 CP040687.1 Protein Homology CDS 801282 802601 . + 0 ID=cds-QIE14767.1;Parent=gene-IXO1088_003895;Dbxref=NCBI_GP:QIE14767.1;Name=QIE14767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_003895;product=IS701 family transposase;protein_id=QIE14767.1;transl_table=11 CP040687.1 Genbank pseudogene 802828 802953 . - . ID=gene-IXO1088_003900;Name=IXO1088_003900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_003900;pseudo=true CP040687.1 Protein Homology CDS 802828 802953 . - 0 ID=cds-IXO1088_003900;Parent=gene-IXO1088_003900;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408523.1;locus_tag=IXO1088_003900;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 802917 804101 . + . ID=gene-IXO1088_003905;Name=IXO1088_003905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003905 CP040687.1 Protein Homology CDS 802917 804101 . + 0 ID=cds-QIE14768.1;Parent=gene-IXO1088_003905;Dbxref=NCBI_GP:QIE14768.1;Name=QIE14768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557964.1;locus_tag=IXO1088_003905;product=IS256 family transposase;protein_id=QIE14768.1;transl_table=11 CP040687.1 Genbank pseudogene 804219 804521 . + . ID=gene-IXO1088_003910;Name=IXO1088_003910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_003910;pseudo=true CP040687.1 Protein Homology CDS 804219 804521 . + 0 ID=cds-IXO1088_003910;Parent=gene-IXO1088_003910;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347842.1;locus_tag=IXO1088_003910;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 804631 805944 . - . ID=gene-IXO1088_003915;Name=IXO1088_003915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003915 CP040687.1 Protein Homology CDS 804631 805944 . - 0 ID=cds-QIE14769.1;Parent=gene-IXO1088_003915;Dbxref=NCBI_GP:QIE14769.1;Name=QIE14769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407610.1;locus_tag=IXO1088_003915;product=ABC transporter ATP-binding protein;protein_id=QIE14769.1;transl_table=11 CP040687.1 Genbank gene 805934 806752 . - . ID=gene-IXO1088_003920;Name=IXO1088_003920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003920 CP040687.1 Protein Homology CDS 805934 806752 . - 0 ID=cds-QIE14770.1;Parent=gene-IXO1088_003920;Dbxref=NCBI_GP:QIE14770.1;Name=QIE14770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446100.1;locus_tag=IXO1088_003920;product=ABC transporter permease;protein_id=QIE14770.1;transl_table=11 CP040687.1 Genbank gene 806975 807916 . - . ID=gene-IXO1088_003925;Name=IXO1088_003925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003925 CP040687.1 Protein Homology CDS 806975 807916 . - 0 ID=cds-QIE14771.1;Parent=gene-IXO1088_003925;Dbxref=NCBI_GP:QIE14771.1;Name=QIE14771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257674.1;locus_tag=IXO1088_003925;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=QIE14771.1;transl_table=11 CP040687.1 Genbank gene 807916 808662 . - . ID=gene-IXO1088_003930;Name=IXO1088_003930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003930 CP040687.1 Protein Homology CDS 807916 808662 . - 0 ID=cds-QIE14772.1;Parent=gene-IXO1088_003930;Dbxref=NCBI_GP:QIE14772.1;Name=QIE14772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019182580.1;locus_tag=IXO1088_003930;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=QIE14772.1;transl_table=11 CP040687.1 Genbank gene 808888 809943 . + . ID=gene-IXO1088_003935;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=IXO1088_003935 CP040687.1 Protein Homology CDS 808888 809943 . + 0 ID=cds-QIE14773.1;Parent=gene-IXO1088_003935;Dbxref=NCBI_GP:QIE14773.1;Name=QIE14773.1;gbkey=CDS;gene=rfbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449666.1;locus_tag=IXO1088_003935;product=dTDP-glucose 4%2C6-dehydratase;protein_id=QIE14773.1;transl_table=11 CP040687.1 Genbank gene 809999 810886 . + . ID=gene-IXO1088_003940;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=IXO1088_003940 CP040687.1 Protein Homology CDS 809999 810886 . + 0 ID=cds-QIE14774.1;Parent=gene-IXO1088_003940;Dbxref=NCBI_GP:QIE14774.1;Name=QIE14774.1;gbkey=CDS;gene=rfbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903936.1;locus_tag=IXO1088_003940;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=QIE14774.1;transl_table=11 CP040687.1 Genbank gene 810883 811440 . + . ID=gene-IXO1088_003945;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=IXO1088_003945 CP040687.1 Protein Homology CDS 810883 811440 . + 0 ID=cds-QIE14775.1;Parent=gene-IXO1088_003945;Dbxref=NCBI_GP:QIE14775.1;Name=QIE14775.1;gbkey=CDS;gene=rfbC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636015.1;locus_tag=IXO1088_003945;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=QIE14775.1;transl_table=11 CP040687.1 Genbank gene 811437 812345 . + . ID=gene-IXO1088_003950;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=IXO1088_003950 CP040687.1 Protein Homology CDS 811437 812345 . + 0 ID=cds-QIE14776.1;Parent=gene-IXO1088_003950;Dbxref=NCBI_GP:QIE14776.1;Name=QIE14776.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636016.1;locus_tag=IXO1088_003950;product=dTDP-4-dehydrorhamnose reductase;protein_id=QIE14776.1;transl_table=11 CP040687.1 Genbank gene 812462 813865 . - . ID=gene-IXO1088_003955;Name=IXO1088_003955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003955 CP040687.1 Protein Homology CDS 812462 813865 . - 0 ID=cds-QIE14777.1;Parent=gene-IXO1088_003955;Dbxref=NCBI_GP:QIE14777.1;Name=QIE14777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850199.1;locus_tag=IXO1088_003955;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=QIE14777.1;transl_table=11 CP040687.1 Genbank gene 813912 815258 . - . ID=gene-IXO1088_003960;Name=IXO1088_003960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003960 CP040687.1 Protein Homology CDS 813912 815258 . - 0 ID=cds-QIE14778.1;Parent=gene-IXO1088_003960;Dbxref=NCBI_GP:QIE14778.1;Name=QIE14778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303601.1;locus_tag=IXO1088_003960;product=phosphomannomutase/phosphoglucomutase;protein_id=QIE14778.1;transl_table=11 CP040687.1 Genbank gene 815392 816123 . + . ID=gene-IXO1088_003965;Name=IXO1088_003965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003965 CP040687.1 Protein Homology CDS 815392 816123 . + 0 ID=cds-QIE14779.1;Parent=gene-IXO1088_003965;Dbxref=NCBI_GP:QIE14779.1;Name=QIE14779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002813977.1;locus_tag=IXO1088_003965;product=CoA transferase subunit A;protein_id=QIE14779.1;transl_table=11 CP040687.1 Genbank gene 816123 816752 . + . ID=gene-IXO1088_003970;Name=IXO1088_003970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003970 CP040687.1 Protein Homology CDS 816123 816752 . + 0 ID=cds-QIE14780.1;Parent=gene-IXO1088_003970;Dbxref=NCBI_GP:QIE14780.1;Name=QIE14780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158247.1;locus_tag=IXO1088_003970;product=CoA transferase subunit B;protein_id=QIE14780.1;transl_table=11 CP040687.1 Genbank gene 816810 818897 . - . ID=gene-IXO1088_003975;Name=IXO1088_003975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003975 CP040687.1 Protein Homology CDS 816810 818897 . - 0 ID=cds-QIE14781.1;Parent=gene-IXO1088_003975;Dbxref=NCBI_GP:QIE14781.1;Name=QIE14781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158246.1;locus_tag=IXO1088_003975;product=hypothetical protein;protein_id=QIE14781.1;transl_table=11 CP040687.1 Genbank gene 818894 820543 . - . ID=gene-IXO1088_003980;Name=IXO1088_003980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003980 CP040687.1 Protein Homology CDS 818894 820543 . - 0 ID=cds-QIE14782.1;Parent=gene-IXO1088_003980;Dbxref=NCBI_GP:QIE14782.1;Name=QIE14782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636022.1;locus_tag=IXO1088_003980;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=QIE14782.1;transl_table=11 CP040687.1 Genbank gene 820659 821267 . + . ID=gene-IXO1088_003985;Name=IXO1088_003985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003985 CP040687.1 Protein Homology CDS 820659 821267 . + 0 ID=cds-QIE14783.1;Parent=gene-IXO1088_003985;Dbxref=NCBI_GP:QIE14783.1;Name=QIE14783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257686.1;locus_tag=IXO1088_003985;product=alpha-ketoglutarate-dependent dioxygenase AlkB;protein_id=QIE14783.1;transl_table=11 CP040687.1 Genbank gene 821661 821891 . + . ID=gene-IXO1088_003990;Name=IXO1088_003990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003990 CP040687.1 Protein Homology CDS 821661 821891 . + 0 ID=cds-QIE14784.1;Parent=gene-IXO1088_003990;Dbxref=NCBI_GP:QIE14784.1;Name=QIE14784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118760.1;locus_tag=IXO1088_003990;product=hypothetical protein;protein_id=QIE14784.1;transl_table=11 CP040687.1 Genbank gene 821818 822462 . - . ID=gene-IXO1088_003995;Name=IXO1088_003995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_003995 CP040687.1 Protein Homology CDS 821818 822462 . - 0 ID=cds-QIE14785.1;Parent=gene-IXO1088_003995;Dbxref=NCBI_GP:QIE14785.1;Name=QIE14785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636024.1;locus_tag=IXO1088_003995;product=ABC transporter;protein_id=QIE14785.1;transl_table=11 CP040687.1 Genbank gene 822459 823385 . - . ID=gene-IXO1088_004000;Name=IXO1088_004000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004000 CP040687.1 Protein Homology CDS 822459 823385 . - 0 ID=cds-QIE14786.1;Parent=gene-IXO1088_004000;Dbxref=NCBI_GP:QIE14786.1;Name=QIE14786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636025.1;locus_tag=IXO1088_004000;product=MCE family protein;protein_id=QIE14786.1;transl_table=11 CP040687.1 Genbank gene 823388 824230 . - . ID=gene-IXO1088_004005;Name=IXO1088_004005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004005 CP040687.1 Protein Homology CDS 823388 824230 . - 0 ID=cds-QIE14787.1;Parent=gene-IXO1088_004005;Dbxref=NCBI_GP:QIE14787.1;Name=QIE14787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007969506.1;locus_tag=IXO1088_004005;product=ABC transporter ATP-binding protein;protein_id=QIE14787.1;transl_table=11 CP040687.1 Genbank gene 824316 825428 . - . ID=gene-IXO1088_004010;Name=IXO1088_004010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004010 CP040687.1 Protein Homology CDS 824316 825428 . - 0 ID=cds-QIE14788.1;Parent=gene-IXO1088_004010;Dbxref=NCBI_GP:QIE14788.1;Name=QIE14788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636027.1;locus_tag=IXO1088_004010;product=ABC transporter permease;protein_id=QIE14788.1;transl_table=11 CP040687.1 Genbank gene 825598 826857 . + . ID=gene-IXO1088_004015;Name=IXO1088_004015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004015 CP040687.1 Protein Homology CDS 825598 826857 . + 0 ID=cds-QIE14789.1;Parent=gene-IXO1088_004015;Dbxref=NCBI_GP:QIE14789.1;Name=QIE14789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636028.1;locus_tag=IXO1088_004015;product=threonine/serine exporter;protein_id=QIE14789.1;transl_table=11 CP040687.1 Genbank gene 826919 827380 . - . ID=gene-IXO1088_004020;Name=IXO1088_004020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004020 CP040687.1 Protein Homology CDS 826919 827380 . - 0 ID=cds-QIE14790.1;Parent=gene-IXO1088_004020;Dbxref=NCBI_GP:QIE14790.1;Name=QIE14790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407621.1;locus_tag=IXO1088_004020;product=DNA-binding protein;protein_id=QIE14790.1;transl_table=11 CP040687.1 Genbank gene 827523 829217 . - . ID=gene-IXO1088_004025;Name=IXO1088_004025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004025 CP040687.1 Protein Homology CDS 827523 829217 . - 0 ID=cds-QIE14791.1;Parent=gene-IXO1088_004025;Dbxref=NCBI_GP:QIE14791.1;Name=QIE14791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902894.1;locus_tag=IXO1088_004025;product=proline--tRNA ligase;protein_id=QIE14791.1;transl_table=11 CP040687.1 Genbank gene 829329 829733 . - . ID=gene-IXO1088_004030;Name=IXO1088_004030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004030 CP040687.1 Protein Homology CDS 829329 829733 . - 0 ID=cds-QIE14792.1;Parent=gene-IXO1088_004030;Dbxref=NCBI_GP:QIE14792.1;Name=QIE14792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446090.1;locus_tag=IXO1088_004030;product=DUF4124 domain-containing protein;protein_id=QIE14792.1;transl_table=11 CP040687.1 Genbank gene 829865 830638 . + . ID=gene-IXO1088_004035;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=IXO1088_004035 CP040687.1 Protein Homology CDS 829865 830638 . + 0 ID=cds-QIE14793.1;Parent=gene-IXO1088_004035;Dbxref=NCBI_GP:QIE14793.1;Name=QIE14793.1;gbkey=CDS;gene=pssA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636033.1;locus_tag=IXO1088_004035;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=QIE14793.1;transl_table=11 CP040687.1 Genbank gene 830649 831116 . + . ID=gene-IXO1088_004040;Name=IXO1088_004040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004040 CP040687.1 Protein Homology CDS 830649 831116 . + 0 ID=cds-QIE14794.1;Parent=gene-IXO1088_004040;Dbxref=NCBI_GP:QIE14794.1;Name=QIE14794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052362.1;locus_tag=IXO1088_004040;product=alanine acetyltransferase;protein_id=QIE14794.1;transl_table=11 CP040687.1 Genbank gene 831122 831595 . + . ID=gene-IXO1088_004045;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=IXO1088_004045 CP040687.1 Protein Homology CDS 831122 831595 . + 0 ID=cds-QIE17859.1;Parent=gene-IXO1088_004045;Dbxref=NCBI_GP:QIE17859.1;Name=QIE17859.1;gbkey=CDS;gene=rimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636035.2;locus_tag=IXO1088_004045;product=ribosomal-protein-alanine N-acetyltransferase;protein_id=QIE17859.1;transl_table=11 CP040687.1 Genbank pseudogene 832091 832258 . + . ID=gene-IXO1088_004050;Name=IXO1088_004050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004050;pseudo=true CP040687.1 Protein Homology CDS 832091 832258 . + 0 ID=cds-IXO1088_004050;Parent=gene-IXO1088_004050;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257114.1;locus_tag=IXO1088_004050;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 832256 832339 . - . ID=gene-IXO1088_004055;Name=IXO1088_004055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004055;pseudo=true CP040687.1 Protein Homology CDS 832256 832339 . - 0 ID=cds-IXO1088_004055;Parent=gene-IXO1088_004055;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257538.1;locus_tag=IXO1088_004055;product=alcohol dehydrogenase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 832376 833590 . + . ID=gene-IXO1088_004060;Name=IXO1088_004060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004060 CP040687.1 Protein Homology CDS 832376 833590 . + 0 ID=cds-QIE14795.1;Parent=gene-IXO1088_004060;Dbxref=NCBI_GP:QIE14795.1;Name=QIE14795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1088_004060;product=IS4-like element ISXo14 family transposase;protein_id=QIE14795.1;transl_table=11 CP040687.1 Genbank pseudogene 833610 834833 . + . ID=gene-IXO1088_004065;Name=IXO1088_004065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004065;pseudo=true CP040687.1 Protein Homology CDS 833610 834833 . + 0 ID=cds-IXO1088_004065;Parent=gene-IXO1088_004065;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_004065;product=IS701-like element ISXo15 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 835046 836014 . - . ID=gene-IXO1088_004070;Name=IXO1088_004070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004070 CP040687.1 Protein Homology CDS 835046 836014 . - 0 ID=cds-QIE14796.1;Parent=gene-IXO1088_004070;Dbxref=NCBI_GP:QIE14796.1;Name=QIE14796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_004070;product=IS5-like element ISXo1 family transposase;protein_id=QIE14796.1;transl_table=11 CP040687.1 Genbank gene 836164 837483 . - . ID=gene-IXO1088_004075;Name=IXO1088_004075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004075 CP040687.1 Protein Homology CDS 836164 837483 . - 0 ID=cds-QIE14797.1;Parent=gene-IXO1088_004075;Dbxref=NCBI_GP:QIE14797.1;Name=QIE14797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_004075;product=IS701 family transposase;protein_id=QIE14797.1;transl_table=11 CP040687.1 Genbank gene 837716 839761 . + . ID=gene-IXO1088_004080;Name=IXO1088_004080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004080 CP040687.1 Protein Homology CDS 837716 839761 . + 0 ID=cds-QIE17860.1;Parent=gene-IXO1088_004080;Dbxref=NCBI_GP:QIE17860.1;Name=QIE17860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638752.1;locus_tag=IXO1088_004080;product=lytic murein transglycosylase;protein_id=QIE17860.1;transl_table=11 CP040687.1 Genbank gene 840028 841068 . - . ID=gene-IXO1088_004085;Name=IXO1088_004085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004085 CP040687.1 Protein Homology CDS 840028 841068 . - 0 ID=cds-QIE14798.1;Parent=gene-IXO1088_004085;Dbxref=NCBI_GP:QIE14798.1;Name=QIE14798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257702.1;locus_tag=IXO1088_004085;product=pectate lyase;protein_id=QIE14798.1;transl_table=11 CP040687.1 Genbank gene 841388 842707 . - . ID=gene-IXO1088_004090;Name=IXO1088_004090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004090 CP040687.1 Protein Homology CDS 841388 842707 . - 0 ID=cds-QIE14799.1;Parent=gene-IXO1088_004090;Dbxref=NCBI_GP:QIE14799.1;Name=QIE14799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_004090;product=IS701 family transposase;protein_id=QIE14799.1;transl_table=11 CP040687.1 Genbank gene 842844 843812 . + . ID=gene-IXO1088_004095;Name=IXO1088_004095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004095 CP040687.1 Protein Homology CDS 842844 843812 . + 0 ID=cds-QIE14800.1;Parent=gene-IXO1088_004095;Dbxref=NCBI_GP:QIE14800.1;Name=QIE14800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_004095;product=IS5-like element ISXo1 family transposase;protein_id=QIE14800.1;transl_table=11 CP040687.1 Genbank gene 844025 845344 . - . ID=gene-IXO1088_004100;Name=IXO1088_004100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004100 CP040687.1 Protein Homology CDS 844025 845344 . - 0 ID=cds-QIE14801.1;Parent=gene-IXO1088_004100;Dbxref=NCBI_GP:QIE14801.1;Name=QIE14801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_004100;product=IS701 family transposase;protein_id=QIE14801.1;transl_table=11 CP040687.1 Genbank gene 845395 845712 . - . ID=gene-IXO1088_004105;Name=IXO1088_004105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004105 CP040687.1 Protein Homology CDS 845395 845712 . - 0 ID=cds-QIE14802.1;Parent=gene-IXO1088_004105;Dbxref=NCBI_GP:QIE14802.1;Name=QIE14802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257706.1;locus_tag=IXO1088_004105;product=class I SAM-dependent methyltransferase;protein_id=QIE14802.1;transl_table=11 CP040687.1 Genbank gene 845895 846997 . - . ID=gene-IXO1088_004110;Name=IXO1088_004110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004110 CP040687.1 Protein Homology CDS 846742 846997 . - 0 ID=cds-QIE14803.1;Parent=gene-IXO1088_004110;Dbxref=NCBI_GP:QIE14803.1;Name=QIE14803.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1088_004110;product=IS3 family transposase;protein_id=QIE14803.1;transl_table=11 CP040687.1 Protein Homology CDS 845895 846742 . - 2 ID=cds-QIE14803.1;Parent=gene-IXO1088_004110;Dbxref=NCBI_GP:QIE14803.1;Name=QIE14803.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1088_004110;product=IS3 family transposase;protein_id=QIE14803.1;transl_table=11 CP040687.1 Genbank pseudogene 847056 847382 . - . ID=gene-IXO1088_004115;Name=IXO1088_004115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004115;pseudo=true CP040687.1 Protein Homology CDS 847056 847382 . - 0 ID=cds-IXO1088_004115;Parent=gene-IXO1088_004115;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1088_004115;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 847624 847926 . - . ID=gene-IXO1088_004120;Name=IXO1088_004120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004120 CP040687.1 Protein Homology CDS 847624 847926 . - 0 ID=cds-QIE14804.1;Parent=gene-IXO1088_004120;Dbxref=NCBI_GP:QIE14804.1;Name=QIE14804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407632.1;locus_tag=IXO1088_004120;product=hypothetical protein;protein_id=QIE14804.1;transl_table=11 CP040687.1 Genbank gene 847934 850876 . - . ID=gene-IXO1088_004125;Name=IXO1088_004125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004125 CP040687.1 Protein Homology CDS 847934 850876 . - 0 ID=cds-QIE14805.1;Parent=gene-IXO1088_004125;Dbxref=NCBI_GP:QIE14805.1;Name=QIE14805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811998.1;locus_tag=IXO1088_004125;product=valine--tRNA ligase;protein_id=QIE14805.1;transl_table=11 CP040687.1 Genbank gene 851084 851509 . - . ID=gene-IXO1088_004130;Name=IXO1088_004130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004130 CP040687.1 Protein Homology CDS 851084 851509 . - 0 ID=cds-QIE14806.1;Parent=gene-IXO1088_004130;Dbxref=NCBI_GP:QIE14806.1;Name=QIE14806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636040.1;locus_tag=IXO1088_004130;product=DNA polymerase III subunit chi;protein_id=QIE14806.1;transl_table=11 CP040687.1 Genbank gene 851550 851855 . - . ID=gene-IXO1088_004135;Name=IXO1088_004135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004135 CP040687.1 Protein Homology CDS 851550 851855 . - 0 ID=cds-QIE14807.1;Parent=gene-IXO1088_004135;Dbxref=NCBI_GP:QIE14807.1;Name=QIE14807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257712.1;locus_tag=IXO1088_004135;product=hypothetical protein;protein_id=QIE14807.1;transl_table=11 CP040687.1 Genbank gene 851855 853327 . - . ID=gene-IXO1088_004140;Name=IXO1088_004140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004140 CP040687.1 Protein Homology CDS 851855 853327 . - 0 ID=cds-QIE14808.1;Parent=gene-IXO1088_004140;Dbxref=NCBI_GP:QIE14808.1;Name=QIE14808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257713.1;locus_tag=IXO1088_004140;product=leucyl aminopeptidase;protein_id=QIE14808.1;transl_table=11 CP040687.1 Genbank gene 853435 854517 . + . ID=gene-IXO1088_004145;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=IXO1088_004145 CP040687.1 Protein Homology CDS 853435 854517 . + 0 ID=cds-QIE14809.1;Parent=gene-IXO1088_004145;Dbxref=NCBI_GP:QIE14809.1;Name=QIE14809.1;gbkey=CDS;gene=lptF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636042.1;locus_tag=IXO1088_004145;product=LPS export ABC transporter permease LptF;protein_id=QIE14809.1;transl_table=11 CP040687.1 Genbank gene 854514 855620 . + . ID=gene-IXO1088_004150;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=IXO1088_004150 CP040687.1 Protein Homology CDS 854514 855620 . + 0 ID=cds-QIE14810.1;Parent=gene-IXO1088_004150;Dbxref=NCBI_GP:QIE14810.1;Name=QIE14810.1;gbkey=CDS;gene=lptG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636043.1;locus_tag=IXO1088_004150;product=LPS export ABC transporter permease LptG;protein_id=QIE14810.1;transl_table=11 CP040687.1 Genbank pseudogene 855625 855924 . + . ID=gene-IXO1088_004155;Name=IXO1088_004155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004155;pseudo=true CP040687.1 Protein Homology CDS 855625 855924 . + 0 ID=cds-IXO1088_004155;Parent=gene-IXO1088_004155;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091062.1;locus_tag=IXO1088_004155;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 856035 856502 . - . ID=gene-IXO1088_004160;Name=IXO1088_004160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004160 CP040687.1 Protein Homology CDS 856035 856502 . - 0 ID=cds-QIE14811.1;Parent=gene-IXO1088_004160;Dbxref=NCBI_GP:QIE14811.1;Name=QIE14811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257716.1;locus_tag=IXO1088_004160;product=RDD family protein;protein_id=QIE14811.1;transl_table=11 CP040687.1 Genbank gene 856929 857900 . + . ID=gene-IXO1088_004165;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=IXO1088_004165 CP040687.1 Protein Homology CDS 856929 857900 . + 0 ID=cds-QIE14812.1;Parent=gene-IXO1088_004165;Dbxref=NCBI_GP:QIE14812.1;Name=QIE14812.1;gbkey=CDS;gene=xerD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636046.1;locus_tag=IXO1088_004165;product=site-specific tyrosine recombinase XerD;protein_id=QIE14812.1;transl_table=11 CP040687.1 Genbank gene 858352 859149 . + . ID=gene-IXO1088_004170;Name=IXO1088_004170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004170 CP040687.1 Protein Homology CDS 858352 859149 . + 0 ID=cds-QIE14813.1;Parent=gene-IXO1088_004170;Dbxref=NCBI_GP:QIE14813.1;Name=QIE14813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636047.1;locus_tag=IXO1088_004170;product=DsbC family protein;protein_id=QIE14813.1;transl_table=11 CP040687.1 Genbank gene 859548 863600 . + . ID=gene-IXO1088_004175;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=IXO1088_004175 CP040687.1 Protein Homology CDS 859548 863600 . + 0 ID=cds-QIE14814.1;Parent=gene-IXO1088_004175;Dbxref=NCBI_GP:QIE14814.1;Name=QIE14814.1;gbkey=CDS;gene=purL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636048.1;locus_tag=IXO1088_004175;product=phosphoribosylformylglycinamidine synthase;protein_id=QIE14814.1;transl_table=11 CP040687.1 Genbank gene 863858 864121 . + . ID=gene-IXO1088_004180;Name=IXO1088_004180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004180 CP040687.1 Protein Homology CDS 863858 864121 . + 0 ID=cds-QIE14815.1;Parent=gene-IXO1088_004180;Dbxref=NCBI_GP:QIE14815.1;Name=QIE14815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302435.1;locus_tag=IXO1088_004180;product=hypothetical protein;protein_id=QIE14815.1;transl_table=11 CP040687.1 Genbank gene 864578 868375 . + . ID=gene-IXO1088_004185;Name=IXO1088_004185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004185 CP040687.1 Protein Homology CDS 864578 868375 . + 0 ID=cds-QIE14816.1;Parent=gene-IXO1088_004185;Dbxref=NCBI_GP:QIE14816.1;Name=QIE14816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636050.1;locus_tag=IXO1088_004185;product=hypothetical protein;protein_id=QIE14816.1;transl_table=11 CP040687.1 Genbank pseudogene 868596 870478 . + . ID=gene-IXO1088_004190;Name=IXO1088_004190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004190;pseudo=true CP040687.1 Protein Homology CDS 868596 870478 . + 0 ID=cds-IXO1088_004190;Parent=gene-IXO1088_004190;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636051.1;locus_tag=IXO1088_004190;product=protease;pseudo=true;transl_table=11 CP040687.1 Genbank gene 870596 872335 . + . ID=gene-IXO1088_004195;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=IXO1088_004195 CP040687.1 Protein Homology CDS 870596 872335 . + 0 ID=cds-QIE14817.1;Parent=gene-IXO1088_004195;Dbxref=NCBI_GP:QIE14817.1;Name=QIE14817.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636052.1;locus_tag=IXO1088_004195;product=type II secretion system protein GspE;protein_id=QIE14817.1;transl_table=11 CP040687.1 Genbank gene 872332 872511 . + . ID=gene-IXO1088_004200;Name=IXO1088_004200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004200 CP040687.1 Protein Homology CDS 872332 872511 . + 0 ID=cds-QIE14818.1;Parent=gene-IXO1088_004200;Dbxref=NCBI_GP:QIE14818.1;Name=QIE14818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302117.1;locus_tag=IXO1088_004200;product=hypothetical protein;protein_id=QIE14818.1;transl_table=11 CP040687.1 Genbank gene 872511 873728 . + . ID=gene-IXO1088_004205;Name=IXO1088_004205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004205 CP040687.1 Protein Homology CDS 872511 873728 . + 0 ID=cds-QIE14819.1;Parent=gene-IXO1088_004205;Dbxref=NCBI_GP:QIE14819.1;Name=QIE14819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636053.1;locus_tag=IXO1088_004205;product=type II secretion system F family protein;protein_id=QIE14819.1;transl_table=11 CP040687.1 Genbank gene 873996 874427 . + . ID=gene-IXO1088_004210;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=IXO1088_004210 CP040687.1 Protein Homology CDS 873996 874427 . + 0 ID=cds-QIE14820.1;Parent=gene-IXO1088_004210;Dbxref=NCBI_GP:QIE14820.1;Name=QIE14820.1;gbkey=CDS;gene=gspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636054.1;locus_tag=IXO1088_004210;product=type II secretion system protein GspG;protein_id=QIE14820.1;transl_table=11 CP040687.1 Genbank gene 874437 874946 . + . ID=gene-IXO1088_004215;Name=gspH;gbkey=Gene;gene=gspH;gene_biotype=protein_coding;locus_tag=IXO1088_004215 CP040687.1 Protein Homology CDS 874437 874946 . + 0 ID=cds-QIE14821.1;Parent=gene-IXO1088_004215;Dbxref=NCBI_GP:QIE14821.1;Name=QIE14821.1;gbkey=CDS;gene=gspH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636055.1;locus_tag=IXO1088_004215;product=type II secretion system protein GspH;protein_id=QIE14821.1;transl_table=11 CP040687.1 Genbank gene 874943 875359 . + . ID=gene-IXO1088_004220;Name=IXO1088_004220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004220 CP040687.1 Protein Homology CDS 874943 875359 . + 0 ID=cds-QIE14822.1;Parent=gene-IXO1088_004220;Dbxref=NCBI_GP:QIE14822.1;Name=QIE14822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257725.1;locus_tag=IXO1088_004220;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=QIE14822.1;transl_table=11 CP040687.1 Genbank gene 875356 875991 . + . ID=gene-IXO1088_004225;Name=IXO1088_004225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004225 CP040687.1 Protein Homology CDS 875356 875991 . + 0 ID=cds-QIE14823.1;Parent=gene-IXO1088_004225;Dbxref=NCBI_GP:QIE14823.1;Name=QIE14823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446065.1;locus_tag=IXO1088_004225;product=type II secretion system protein J;protein_id=QIE14823.1;transl_table=11 CP040687.1 Genbank gene 875988 876839 . + . ID=gene-IXO1088_004230;Name=IXO1088_004230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004230 CP040687.1 Protein Homology CDS 875988 876839 . + 0 ID=cds-QIE14824.1;Parent=gene-IXO1088_004230;Dbxref=NCBI_GP:QIE14824.1;Name=QIE14824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636058.1;locus_tag=IXO1088_004230;product=general secretion pathway protein GspK;protein_id=QIE14824.1;transl_table=11 CP040687.1 Genbank gene 876836 877957 . + . ID=gene-IXO1088_004235;Name=IXO1088_004235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004235 CP040687.1 Protein Homology CDS 876836 877957 . + 0 ID=cds-QIE14825.1;Parent=gene-IXO1088_004235;Dbxref=NCBI_GP:QIE14825.1;Name=QIE14825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636059.1;locus_tag=IXO1088_004235;product=PilN domain-containing protein;protein_id=QIE14825.1;transl_table=11 CP040687.1 Genbank gene 877941 878594 . + . ID=gene-IXO1088_004240;Name=IXO1088_004240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004240 CP040687.1 Protein Homology CDS 877941 878594 . + 0 ID=cds-QIE14826.1;Parent=gene-IXO1088_004240;Dbxref=NCBI_GP:QIE14826.1;Name=QIE14826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636060.1;locus_tag=IXO1088_004240;product=general secretion pathway protein GspM;protein_id=QIE14826.1;transl_table=11 CP040687.1 Genbank gene 878584 879387 . + . ID=gene-IXO1088_004245;Name=IXO1088_004245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004245 CP040687.1 Protein Homology CDS 878584 879387 . + 0 ID=cds-QIE14827.1;Parent=gene-IXO1088_004245;Dbxref=NCBI_GP:QIE14827.1;Name=QIE14827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035909.1;locus_tag=IXO1088_004245;product=general secretion pathway protein GspN;protein_id=QIE14827.1;transl_table=11 CP040687.1 Genbank gene 879384 881696 . + . ID=gene-IXO1088_004250;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=IXO1088_004250 CP040687.1 Protein Homology CDS 879384 881696 . + 0 ID=cds-QIE14828.1;Parent=gene-IXO1088_004250;Dbxref=NCBI_GP:QIE14828.1;Name=QIE14828.1;gbkey=CDS;gene=gspD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367762.1;locus_tag=IXO1088_004250;product=type II secretion system protein GspD;protein_id=QIE14828.1;transl_table=11 CP040687.1 Genbank gene 881693 882532 . + . ID=gene-IXO1088_004255;Name=IXO1088_004255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004255 CP040687.1 Protein Homology CDS 881693 882532 . + 0 ID=cds-QIE14829.1;Parent=gene-IXO1088_004255;Dbxref=NCBI_GP:QIE14829.1;Name=QIE14829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010378108.1;locus_tag=IXO1088_004255;product=glycosyltransferase;protein_id=QIE14829.1;transl_table=11 CP040687.1 Genbank gene 882949 883677 . - . ID=gene-IXO1088_004260;Name=IXO1088_004260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004260 CP040687.1 Protein Homology CDS 882949 883677 . - 0 ID=cds-QIE14830.1;Parent=gene-IXO1088_004260;Dbxref=NCBI_GP:QIE14830.1;Name=QIE14830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636064.1;locus_tag=IXO1088_004260;product=UTRA domain-containing protein;protein_id=QIE14830.1;transl_table=11 CP040687.1 Genbank gene 883783 884358 . - . ID=gene-IXO1088_004265;Name=IXO1088_004265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004265 CP040687.1 Protein Homology CDS 883783 884358 . - 0 ID=cds-QIE14831.1;Parent=gene-IXO1088_004265;Dbxref=NCBI_GP:QIE14831.1;Name=QIE14831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636065.1;locus_tag=IXO1088_004265;product=nicotinamide mononucleotide transporter;protein_id=QIE14831.1;transl_table=11 CP040687.1 Genbank gene 884473 884544 . + . ID=gene-IXO1088_004270;Name=IXO1088_004270;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_004270 CP040687.1 cmsearch ncRNA 884473 884544 . + . ID=rna-IXO1088_004270;Parent=gene-IXO1088_004270;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_004270;product=sX9 sRNA CP040687.1 cmsearch exon 884473 884544 . + . ID=exon-IXO1088_004270-1;Parent=rna-IXO1088_004270;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_004270;product=sX9 sRNA CP040687.1 Genbank gene 884734 886896 . - . ID=gene-IXO1088_004275;Name=IXO1088_004275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004275 CP040687.1 Protein Homology CDS 884734 886896 . - 0 ID=cds-QIE14832.1;Parent=gene-IXO1088_004275;Dbxref=NCBI_GP:QIE14832.1;Name=QIE14832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004429142.1;locus_tag=IXO1088_004275;product=TonB-dependent siderophore receptor;protein_id=QIE14832.1;transl_table=11 CP040687.1 Genbank gene 886932 888089 . - . ID=gene-IXO1088_004280;Name=IXO1088_004280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004280 CP040687.1 Protein Homology CDS 886932 888089 . - 0 ID=cds-QIE14833.1;Parent=gene-IXO1088_004280;Dbxref=NCBI_GP:QIE14833.1;Name=QIE14833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300523.1;locus_tag=IXO1088_004280;product=aminoglycoside phosphotransferase family protein;protein_id=QIE14833.1;transl_table=11 CP040687.1 Genbank pseudogene 888385 888692 . + . ID=gene-IXO1088_004285;Name=IXO1088_004285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004285;pseudo=true CP040687.1 Protein Homology CDS 888385 888692 . + 0 ID=cds-IXO1088_004285;Parent=gene-IXO1088_004285;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920724.1;locus_tag=IXO1088_004285;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 888700 889539 . + . ID=gene-IXO1088_004290;Name=IXO1088_004290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004290 CP040687.1 Protein Homology CDS 888700 889539 . + 0 ID=cds-QIE14834.1;Parent=gene-IXO1088_004290;Dbxref=NCBI_GP:QIE14834.1;Name=QIE14834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636068.1;locus_tag=IXO1088_004290;product=glycosyltransferase family 2 protein;protein_id=QIE14834.1;transl_table=11 CP040687.1 Genbank pseudogene 889581 890363 . + . ID=gene-IXO1088_004295;Name=IXO1088_004295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004295;pseudo=true CP040687.1 Protein Homology CDS 889581 890363 . + 0 ID=cds-IXO1088_004295;Parent=gene-IXO1088_004295;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408472.1;locus_tag=IXO1088_004295;product=IS630 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 890370 890477 . - . ID=gene-IXO1088_004300;Name=IXO1088_004300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004300;pseudo=true CP040687.1 Protein Homology CDS 890370 890477 . - 0 ID=cds-IXO1088_004300;Parent=gene-IXO1088_004300;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501289.1;locus_tag=IXO1088_004300;product=IS1595 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 890468 890575 . - . ID=gene-IXO1088_004305;Name=IXO1088_004305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004305;pseudo=true CP040687.1 Protein Homology CDS 890468 890575 . - 0 ID=cds-IXO1088_004305;Parent=gene-IXO1088_004305;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445011.1;locus_tag=IXO1088_004305;product=IS1595 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 890597 890894 . + . ID=gene-IXO1088_004310;Name=IXO1088_004310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004310;pseudo=true CP040687.1 Protein Homology CDS 890597 890894 . + 0 ID=cds-IXO1088_004310;Parent=gene-IXO1088_004310;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011238416.1;locus_tag=IXO1088_004310;product=IS630 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank direct_repeat 890913 892129 . + . ID=id-CP040687.1:890913..892129;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=890913..890943;rpt_unit_seq=gtttcaatccacgcgcccgtgaggacgcgac CP040687.1 Genbank gene 892238 893194 . + . ID=gene-IXO1088_004315;Name=IXO1088_004315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004315 CP040687.1 Protein Homology CDS 892238 893194 . + 0 ID=cds-QIE14835.1;Parent=gene-IXO1088_004315;Dbxref=NCBI_GP:QIE14835.1;Name=QIE14835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_082322974.1;locus_tag=IXO1088_004315;product=IS30 family transposase;protein_id=QIE14835.1;transl_table=11 CP040687.1 Genbank direct_repeat 893222 899162 . + . ID=id-CP040687.1:893222..899162;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=893222..893252;rpt_unit_seq=gtttcaatccacgcgcccgtgaggacgcgac CP040687.1 Genbank gene 899350 899640 . - . ID=gene-IXO1088_004320;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=IXO1088_004320 CP040687.1 Protein Homology CDS 899350 899640 . - 0 ID=cds-QIE14836.1;Parent=gene-IXO1088_004320;Dbxref=NCBI_GP:QIE14836.1;Name=QIE14836.1;gbkey=CDS;gene=cas2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003465411.1;locus_tag=IXO1088_004320;product=CRISPR-associated endonuclease Cas2;protein_id=QIE14836.1;transl_table=11 CP040687.1 Genbank gene 899655 900689 . - . ID=gene-IXO1088_004325;Name=cas1c;gbkey=Gene;gene=cas1c;gene_biotype=protein_coding;locus_tag=IXO1088_004325 CP040687.1 Protein Homology CDS 899655 900689 . - 0 ID=cds-QIE14837.1;Parent=gene-IXO1088_004325;Dbxref=NCBI_GP:QIE14837.1;Name=QIE14837.1;gbkey=CDS;gene=cas1c;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927095.1;locus_tag=IXO1088_004325;product=type I-C CRISPR-associated endonuclease Cas1;protein_id=QIE14837.1;transl_table=11 CP040687.1 Genbank gene 900692 901324 . - . ID=gene-IXO1088_004330;Name=cas4;gbkey=Gene;gene=cas4;gene_biotype=protein_coding;locus_tag=IXO1088_004330 CP040687.1 Protein Homology CDS 900692 901324 . - 0 ID=cds-QIE14838.1;Parent=gene-IXO1088_004330;Dbxref=NCBI_GP:QIE14838.1;Name=QIE14838.1;gbkey=CDS;gene=cas4;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927098.1;locus_tag=IXO1088_004330;product=CRISPR-associated protein Cas4;protein_id=QIE14838.1;transl_table=11 CP040687.1 Genbank gene 901344 902210 . - . ID=gene-IXO1088_004335;Name=cas7c;gbkey=Gene;gene=cas7c;gene_biotype=protein_coding;locus_tag=IXO1088_004335 CP040687.1 Protein Homology CDS 901344 902210 . - 0 ID=cds-QIE14839.1;Parent=gene-IXO1088_004335;Dbxref=NCBI_GP:QIE14839.1;Name=QIE14839.1;gbkey=CDS;gene=cas7c;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372412.1;locus_tag=IXO1088_004335;product=type I-C CRISPR-associated protein Cas7/Csd2;protein_id=QIE14839.1;transl_table=11 CP040687.1 Genbank gene 902207 904051 . - . ID=gene-IXO1088_004340;Name=cas8c;gbkey=Gene;gene=cas8c;gene_biotype=protein_coding;locus_tag=IXO1088_004340 CP040687.1 Protein Homology CDS 902207 904051 . - 0 ID=cds-QIE14840.1;Parent=gene-IXO1088_004340;Dbxref=NCBI_GP:QIE14840.1;Name=QIE14840.1;gbkey=CDS;gene=cas8c;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017119023.1;locus_tag=IXO1088_004340;product=type I-C CRISPR-associated protein Cas8c/Csd1;protein_id=QIE14840.1;transl_table=11 CP040687.1 Genbank gene 904048 904722 . - . ID=gene-IXO1088_004345;Name=cas5c;gbkey=Gene;gene=cas5c;gene_biotype=protein_coding;locus_tag=IXO1088_004345 CP040687.1 Protein Homology CDS 904048 904722 . - 0 ID=cds-QIE14841.1;Parent=gene-IXO1088_004345;Dbxref=NCBI_GP:QIE14841.1;Name=QIE14841.1;gbkey=CDS;gene=cas5c;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003465423.1;locus_tag=IXO1088_004345;product=type I-C CRISPR-associated protein Cas5;protein_id=QIE14841.1;transl_table=11 CP040687.1 Genbank gene 904850 907141 . - . ID=gene-IXO1088_004350;Name=IXO1088_004350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004350 CP040687.1 Protein Homology CDS 904850 907141 . - 0 ID=cds-QIE14842.1;Parent=gene-IXO1088_004350;Dbxref=NCBI_GP:QIE14842.1;Name=QIE14842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257747.1;locus_tag=IXO1088_004350;product=CRISPR-associated helicase/endonuclease Cas3;protein_id=QIE14842.1;transl_table=11 CP040687.1 Genbank gene 907253 908218 . + . ID=gene-IXO1088_004355;Name=IXO1088_004355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004355 CP040687.1 Protein Homology CDS 907253 908218 . + 0 ID=cds-QIE14843.1;Parent=gene-IXO1088_004355;Dbxref=NCBI_GP:QIE14843.1;Name=QIE14843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_004355;product=IS1595-like element ISXo5 family transposase;protein_id=QIE14843.1;transl_table=11 CP040687.1 Genbank pseudogene 908226 908504 . + . ID=gene-IXO1088_004360;Name=IXO1088_004360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004360;pseudo=true CP040687.1 Protein Homology CDS 908226 908504 . + 0 ID=cds-IXO1088_004360;Parent=gene-IXO1088_004360;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571611.1;locus_tag=IXO1088_004360;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 908609 909184 . - . ID=gene-IXO1088_004365;Name=IXO1088_004365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004365 CP040687.1 Protein Homology CDS 908609 909184 . - 0 ID=cds-QIE14844.1;Parent=gene-IXO1088_004365;Dbxref=NCBI_GP:QIE14844.1;Name=QIE14844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159643.1;locus_tag=IXO1088_004365;product=septum formation inhibitor Maf;protein_id=QIE14844.1;transl_table=11 CP040687.1 Genbank gene 909297 909806 . + . ID=gene-IXO1088_004370;Name=IXO1088_004370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004370 CP040687.1 Protein Homology CDS 909297 909806 . + 0 ID=cds-QIE17861.1;Parent=gene-IXO1088_004370;Dbxref=NCBI_GP:QIE17861.1;Name=QIE17861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636390.1;locus_tag=IXO1088_004370;product=DUF177 domain-containing protein;protein_id=QIE17861.1;transl_table=11 CP040687.1 Genbank gene 909905 910099 . + . ID=gene-IXO1088_004375;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=IXO1088_004375 CP040687.1 Protein Homology CDS 909905 910099 . + 0 ID=cds-QIE14845.1;Parent=gene-IXO1088_004375;Dbxref=NCBI_GP:QIE14845.1;Name=QIE14845.1;gbkey=CDS;gene=rpmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636391.1;locus_tag=IXO1088_004375;product=50S ribosomal protein L32;protein_id=QIE14845.1;transl_table=11 CP040687.1 Genbank gene 910189 911166 . + . ID=gene-IXO1088_004380;Name=IXO1088_004380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004380 CP040687.1 Protein Homology CDS 910189 911166 . + 0 ID=cds-QIE14846.1;Parent=gene-IXO1088_004380;Dbxref=NCBI_GP:QIE14846.1;Name=QIE14846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636392.1;locus_tag=IXO1088_004380;product=ketoacyl-ACP synthase III;protein_id=QIE14846.1;transl_table=11 CP040687.1 Genbank gene 911396 911836 . + . ID=gene-IXO1088_004385;Name=IXO1088_004385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004385 CP040687.1 Protein Homology CDS 911396 911836 . + 0 ID=cds-QIE14847.1;Parent=gene-IXO1088_004385;Dbxref=NCBI_GP:QIE14847.1;Name=QIE14847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007969006.1;locus_tag=IXO1088_004385;product=MEKHLA domain-containing protein;protein_id=QIE14847.1;transl_table=11 CP040687.1 Genbank gene 912114 913058 . + . ID=gene-IXO1088_004390;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=IXO1088_004390 CP040687.1 Protein Homology CDS 912114 913058 . + 0 ID=cds-QIE14848.1;Parent=gene-IXO1088_004390;Dbxref=NCBI_GP:QIE14848.1;Name=QIE14848.1;gbkey=CDS;gene=fabD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636393.1;locus_tag=IXO1088_004390;product=ACP S-malonyltransferase;protein_id=QIE14848.1;transl_table=11 CP040687.1 Genbank gene 913141 913884 . + . ID=gene-IXO1088_004395;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=IXO1088_004395 CP040687.1 Protein Homology CDS 913141 913884 . + 0 ID=cds-QIE14849.1;Parent=gene-IXO1088_004395;Dbxref=NCBI_GP:QIE14849.1;Name=QIE14849.1;gbkey=CDS;gene=fabG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814323.1;locus_tag=IXO1088_004395;product=3-oxoacyl-ACP reductase FabG;protein_id=QIE14849.1;transl_table=11 CP040687.1 Genbank gene 914089 914328 . + . ID=gene-IXO1088_004400;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=IXO1088_004400 CP040687.1 Protein Homology CDS 914089 914328 . + 0 ID=cds-QIE14850.1;Parent=gene-IXO1088_004400;Dbxref=NCBI_GP:QIE14850.1;Name=QIE14850.1;gbkey=CDS;gene=acpP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013535667.1;locus_tag=IXO1088_004400;product=acyl carrier protein;protein_id=QIE14850.1;transl_table=11 CP040687.1 Genbank gene 914470 915705 . + . ID=gene-IXO1088_004405;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=IXO1088_004405 CP040687.1 Protein Homology CDS 914470 915705 . + 0 ID=cds-QIE14851.1;Parent=gene-IXO1088_004405;Dbxref=NCBI_GP:QIE14851.1;Name=QIE14851.1;gbkey=CDS;gene=fabF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636396.1;locus_tag=IXO1088_004405;product=beta-ketoacyl-ACP synthase II;protein_id=QIE14851.1;transl_table=11 CP040687.1 Genbank gene 915876 917231 . + . ID=gene-IXO1088_004410;Name=IXO1088_004410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004410 CP040687.1 Protein Homology CDS 915876 917231 . + 0 ID=cds-QIE14852.1;Parent=gene-IXO1088_004410;Dbxref=NCBI_GP:QIE14852.1;Name=QIE14852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112158.1;locus_tag=IXO1088_004410;product=aminodeoxychorismate synthase component I;protein_id=QIE14852.1;transl_table=11 CP040687.1 Genbank gene 917292 918365 . + . ID=gene-IXO1088_004415;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=IXO1088_004415 CP040687.1 Protein Homology CDS 917292 918365 . + 0 ID=cds-QIE14853.1;Parent=gene-IXO1088_004415;Dbxref=NCBI_GP:QIE14853.1;Name=QIE14853.1;gbkey=CDS;gene=mltG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304129.1;locus_tag=IXO1088_004415;product=endolytic transglycosylase MltG;protein_id=QIE14853.1;transl_table=11 CP040687.1 Genbank gene 918362 919321 . + . ID=gene-IXO1088_004420;Name=IXO1088_004420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004420 CP040687.1 Protein Homology CDS 918362 919321 . + 0 ID=cds-QIE14854.1;Parent=gene-IXO1088_004420;Dbxref=NCBI_GP:QIE14854.1;Name=QIE14854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636399.1;locus_tag=IXO1088_004420;product=DNA polymerase III subunit delta';protein_id=QIE14854.1;transl_table=11 CP040687.1 Genbank gene 919318 919671 . + . ID=gene-IXO1088_004425;Name=IXO1088_004425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004425 CP040687.1 Protein Homology CDS 919318 919671 . + 0 ID=cds-QIE14855.1;Parent=gene-IXO1088_004425;Dbxref=NCBI_GP:QIE14855.1;Name=QIE14855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636400.1;locus_tag=IXO1088_004425;product=pilus assembly protein PilZ;protein_id=QIE14855.1;transl_table=11 CP040687.1 Genbank gene 919947 920021 . + . ID=gene-IXO1088_004430;Name=IXO1088_004430;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_004430 CP040687.1 tRNAscan-SE tRNA 919947 920021 . + . ID=rna-IXO1088_004430;Parent=gene-IXO1088_004430;anticodon=(pos:919979..919981);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_004430;product=tRNA-Val CP040687.1 tRNAscan-SE exon 919947 920021 . + . ID=exon-IXO1088_004430-1;Parent=rna-IXO1088_004430;anticodon=(pos:919979..919981);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_004430;product=tRNA-Val CP040687.1 Genbank gene 920361 921002 . + . ID=gene-IXO1088_004435;Name=IXO1088_004435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004435 CP040687.1 GeneMarkS-2+ CDS 920361 921002 . + 0 ID=cds-QIE14856.1;Parent=gene-IXO1088_004435;Dbxref=NCBI_GP:QIE14856.1;Name=QIE14856.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_004435;product=hypothetical protein;protein_id=QIE14856.1;transl_table=11 CP040687.1 Genbank gene 921248 921433 . + . ID=gene-IXO1088_004440;Name=IXO1088_004440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004440 CP040687.1 Protein Homology CDS 921248 921433 . + 0 ID=cds-QIE14857.1;Parent=gene-IXO1088_004440;Dbxref=NCBI_GP:QIE14857.1;Name=QIE14857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502263.1;locus_tag=IXO1088_004440;product=hypothetical protein;protein_id=QIE14857.1;transl_table=11 CP040687.1 Genbank gene 921516 921842 . + . ID=gene-IXO1088_004445;Name=IXO1088_004445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004445 CP040687.1 Protein Homology CDS 921516 921842 . + 0 ID=cds-QIE14858.1;Parent=gene-IXO1088_004445;Dbxref=NCBI_GP:QIE14858.1;Name=QIE14858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089549.1;locus_tag=IXO1088_004445;product=hypothetical protein;protein_id=QIE14858.1;transl_table=11 CP040687.1 Genbank gene 922079 923677 . - . ID=gene-IXO1088_004450;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=IXO1088_004450 CP040687.1 Protein Homology CDS 922079 923677 . - 0 ID=cds-QIE17862.1;Parent=gene-IXO1088_004450;Dbxref=NCBI_GP:QIE17862.1;Name=QIE17862.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502265.1;locus_tag=IXO1088_004450;product=propionate catabolism operon regulatory protein PrpR;protein_id=QIE17862.1;transl_table=11 CP040687.1 Genbank gene 923823 924719 . + . ID=gene-IXO1088_004455;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=IXO1088_004455 CP040687.1 Protein Homology CDS 923823 924719 . + 0 ID=cds-QIE14859.1;Parent=gene-IXO1088_004455;Dbxref=NCBI_GP:QIE14859.1;Name=QIE14859.1;gbkey=CDS;gene=prpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257763.1;locus_tag=IXO1088_004455;product=methylisocitrate lyase;protein_id=QIE14859.1;transl_table=11 CP040687.1 Genbank gene 924795 925949 . + . ID=gene-IXO1088_004460;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=IXO1088_004460 CP040687.1 Protein Homology CDS 924795 925949 . + 0 ID=cds-QIE14860.1;Parent=gene-IXO1088_004460;Dbxref=NCBI_GP:QIE14860.1;Name=QIE14860.1;gbkey=CDS;gene=prpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502267.1;locus_tag=IXO1088_004460;product=2-methylcitrate synthase;protein_id=QIE14860.1;transl_table=11 CP040687.1 Genbank gene 926130 928721 . + . ID=gene-IXO1088_004465;Name=acnD;gbkey=Gene;gene=acnD;gene_biotype=protein_coding;locus_tag=IXO1088_004465 CP040687.1 Protein Homology CDS 926130 928721 . + 0 ID=cds-QIE14861.1;Parent=gene-IXO1088_004465;Dbxref=NCBI_GP:QIE14861.1;Name=QIE14861.1;gbkey=CDS;gene=acnD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849833.1;locus_tag=IXO1088_004465;product=Fe/S-dependent 2-methylisocitrate dehydratase AcnD;protein_id=QIE14861.1;transl_table=11 CP040687.1 Genbank gene 929044 929181 . + . ID=gene-IXO1088_004470;Name=IXO1088_004470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004470 CP040687.1 Protein Homology CDS 929044 929181 . + 0 ID=cds-QIE14862.1;Parent=gene-IXO1088_004470;Dbxref=NCBI_GP:QIE14862.1;Name=QIE14862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502270.1;locus_tag=IXO1088_004470;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=QIE14862.1;transl_table=11 CP040687.1 Genbank gene 929265 929462 . - . ID=gene-IXO1088_004475;Name=IXO1088_004475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004475 CP040687.1 Protein Homology CDS 929265 929462 . - 0 ID=cds-QIE17863.1;Parent=gene-IXO1088_004475;Dbxref=NCBI_GP:QIE17863.1;Name=QIE17863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502271.1;locus_tag=IXO1088_004475;product=hypothetical protein;protein_id=QIE17863.1;transl_table=11 CP040687.1 Genbank gene 929454 930653 . + . ID=gene-IXO1088_004480;Name=prpF;gbkey=Gene;gene=prpF;gene_biotype=protein_coding;locus_tag=IXO1088_004480 CP040687.1 Protein Homology CDS 929454 930653 . + 0 ID=cds-QIE14863.1;Parent=gene-IXO1088_004480;Dbxref=NCBI_GP:QIE14863.1;Name=QIE14863.1;gbkey=CDS;gene=prpF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379007.1;locus_tag=IXO1088_004480;product=2-methylaconitate cis-trans isomerase PrpF;protein_id=QIE14863.1;transl_table=11 CP040687.1 Genbank gene 931153 933369 . + . ID=gene-IXO1088_004485;Name=IXO1088_004485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004485 CP040687.1 Protein Homology CDS 931153 933369 . + 0 ID=cds-QIE14864.1;Parent=gene-IXO1088_004485;Dbxref=NCBI_GP:QIE14864.1;Name=QIE14864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636412.1;locus_tag=IXO1088_004485;product=TonB-dependent receptor;protein_id=QIE14864.1;transl_table=11 CP040687.1 Genbank gene 933448 934446 . + . ID=gene-IXO1088_004490;Name=IXO1088_004490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004490 CP040687.1 Protein Homology CDS 933448 934446 . + 0 ID=cds-QIE14865.1;Parent=gene-IXO1088_004490;Dbxref=NCBI_GP:QIE14865.1;Name=QIE14865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089556.1;locus_tag=IXO1088_004490;product=nucleoside hydrolase;protein_id=QIE14865.1;transl_table=11 CP040687.1 Genbank gene 934556 934738 . - . ID=gene-IXO1088_004495;Name=IXO1088_004495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004495 CP040687.1 Protein Homology CDS 934556 934738 . - 0 ID=cds-QIE14866.1;Parent=gene-IXO1088_004495;Dbxref=NCBI_GP:QIE14866.1;Name=QIE14866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158623.1;locus_tag=IXO1088_004495;product=hypothetical protein;protein_id=QIE14866.1;transl_table=11 CP040687.1 Genbank pseudogene 935041 935507 . + . ID=gene-IXO1088_004500;Name=IXO1088_004500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004500;pseudo=true CP040687.1 Protein Homology CDS 935041 935507 . + 0 ID=cds-IXO1088_004500;Parent=gene-IXO1088_004500;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913955.1;locus_tag=IXO1088_004500;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 935718 938705 . + . ID=gene-IXO1088_004505;Name=IXO1088_004505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004505 CP040687.1 Protein Homology CDS 935718 938705 . + 0 ID=cds-QIE14867.1;Parent=gene-IXO1088_004505;Dbxref=NCBI_GP:QIE14867.1;Name=QIE14867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636416.2;locus_tag=IXO1088_004505;product=TonB-dependent receptor;protein_id=QIE14867.1;transl_table=11 CP040687.1 Genbank gene 938880 939827 . + . ID=gene-IXO1088_004510;Name=IXO1088_004510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004510 CP040687.1 Protein Homology CDS 938880 939827 . + 0 ID=cds-QIE14868.1;Parent=gene-IXO1088_004510;Dbxref=NCBI_GP:QIE14868.1;Name=QIE14868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016944837.1;locus_tag=IXO1088_004510;product=glycerophosphodiester phosphodiesterase family protein;protein_id=QIE14868.1;transl_table=11 CP040687.1 Genbank gene 940153 940437 . + . ID=gene-IXO1088_004515;Name=IXO1088_004515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004515 CP040687.1 Protein Homology CDS 940153 940437 . + 0 ID=cds-QIE14869.1;Parent=gene-IXO1088_004515;Dbxref=NCBI_GP:QIE14869.1;Name=QIE14869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303025.1;locus_tag=IXO1088_004515;product=hypothetical protein;protein_id=QIE14869.1;transl_table=11 CP040687.1 Genbank gene 940326 940862 . + . ID=gene-IXO1088_004520;Name=IXO1088_004520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004520 CP040687.1 Protein Homology CDS 940326 940862 . + 0 ID=cds-QIE14870.1;Parent=gene-IXO1088_004520;Dbxref=NCBI_GP:QIE14870.1;Name=QIE14870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407676.1;locus_tag=IXO1088_004520;product=hypothetical protein;protein_id=QIE14870.1;transl_table=11 CP040687.1 Genbank pseudogene 940870 941040 . + . ID=gene-IXO1088_004525;Name=IXO1088_004525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004525;pseudo=true CP040687.1 Protein Homology CDS 940870 941040 . + 0 ID=cds-IXO1088_004525;Parent=gene-IXO1088_004525;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257114.1;locus_tag=IXO1088_004525;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 941108 942343 . + . ID=gene-IXO1088_004530;Name=IXO1088_004530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004530 CP040687.1 Protein Homology CDS 941108 942343 . + 0 ID=cds-QIE14871.1;Parent=gene-IXO1088_004530;Dbxref=NCBI_GP:QIE14871.1;Name=QIE14871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1088_004530;product=ISL3 family transposase;protein_id=QIE14871.1;transl_table=11 CP040687.1 Genbank pseudogene 942364 942999 . + . ID=gene-IXO1088_004535;Name=IXO1088_004535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004535;pseudo=true CP040687.1 Protein Homology CDS 942364 942999 . + 0 ID=cds-IXO1088_004535;Parent=gene-IXO1088_004535;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_004535;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 943041 943839 . + . ID=gene-IXO1088_004540;Name=IXO1088_004540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004540 CP040687.1 Protein Homology CDS 943041 943312 . + 0 ID=cds-QIE14872.1;Parent=gene-IXO1088_004540;Dbxref=NCBI_GP:QIE14872.1;Name=QIE14872.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_004540;product=IS5 family transposase;protein_id=QIE14872.1;transl_table=11 CP040687.1 Protein Homology CDS 943311 943839 . + 1 ID=cds-QIE14872.1;Parent=gene-IXO1088_004540;Dbxref=NCBI_GP:QIE14872.1;Name=QIE14872.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_004540;product=IS5 family transposase;protein_id=QIE14872.1;transl_table=11 CP040687.1 Genbank pseudogene 943849 944424 . + . ID=gene-IXO1088_004545;Name=IXO1088_004545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004545;pseudo=true CP040687.1 Protein Homology CDS 943849 944424 . + 0 ID=cds-IXO1088_004545;Parent=gene-IXO1088_004545;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_004545;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 944370 944510 . + . ID=gene-IXO1088_004550;Name=IXO1088_004550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004550;pseudo=true CP040687.1 Protein Homology CDS 944370 944510 . + 0 ID=cds-IXO1088_004550;Parent=gene-IXO1088_004550;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409568.1;locus_tag=IXO1088_004550;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 944574 944650 . + . ID=gene-IXO1088_004555;Name=IXO1088_004555;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_004555 CP040687.1 cmsearch ncRNA 944574 944650 . + . ID=rna-IXO1088_004555;Parent=gene-IXO1088_004555;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_004555;product=sX9 sRNA CP040687.1 cmsearch exon 944574 944650 . + . ID=exon-IXO1088_004555-1;Parent=rna-IXO1088_004555;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_004555;product=sX9 sRNA CP040687.1 Genbank gene 944769 945731 . + . ID=gene-IXO1088_004560;Name=IXO1088_004560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004560 CP040687.1 Protein Homology CDS 944769 945731 . + 0 ID=cds-QIE14873.1;Parent=gene-IXO1088_004560;Dbxref=NCBI_GP:QIE14873.1;Name=QIE14873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407678.1;locus_tag=IXO1088_004560;product=IS30 family transposase;protein_id=QIE14873.1;transl_table=11 CP040687.1 Genbank gene 945871 946431 . - . ID=gene-IXO1088_004565;Name=IXO1088_004565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004565 CP040687.1 Protein Homology CDS 945871 946431 . - 0 ID=cds-QIE14874.1;Parent=gene-IXO1088_004565;Dbxref=NCBI_GP:QIE14874.1;Name=QIE14874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005996162.1;locus_tag=IXO1088_004565;product=bacterioferritin;protein_id=QIE14874.1;transl_table=11 CP040687.1 Genbank gene 946474 946956 . - . ID=gene-IXO1088_004570;Name=IXO1088_004570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004570 CP040687.1 Protein Homology CDS 946474 946956 . - 0 ID=cds-QIE14875.1;Parent=gene-IXO1088_004570;Dbxref=NCBI_GP:QIE14875.1;Name=QIE14875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636421.1;locus_tag=IXO1088_004570;product=peroxiredoxin;protein_id=QIE14875.1;transl_table=11 CP040687.1 Genbank gene 947119 947595 . + . ID=gene-IXO1088_004575;Name=IXO1088_004575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004575 CP040687.1 Protein Homology CDS 947119 947595 . + 0 ID=cds-QIE14876.1;Parent=gene-IXO1088_004575;Dbxref=NCBI_GP:QIE14876.1;Name=QIE14876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636422.1;locus_tag=IXO1088_004575;product=Hsp20/alpha crystallin family protein;protein_id=QIE14876.1;transl_table=11 CP040687.1 Genbank gene 948006 948905 . + . ID=gene-IXO1088_004580;Name=IXO1088_004580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004580 CP040687.1 Protein Homology CDS 948006 948905 . + 0 ID=cds-QIE14877.1;Parent=gene-IXO1088_004580;Dbxref=NCBI_GP:QIE14877.1;Name=QIE14877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257781.1;locus_tag=IXO1088_004580;product=J domain-containing protein;protein_id=QIE14877.1;transl_table=11 CP040687.1 Genbank gene 949145 949531 . + . ID=gene-IXO1088_004585;Name=IXO1088_004585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004585 CP040687.1 Protein Homology CDS 949145 949531 . + 0 ID=cds-QIE14878.1;Parent=gene-IXO1088_004585;Dbxref=NCBI_GP:QIE14878.1;Name=QIE14878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636424.1;locus_tag=IXO1088_004585;product=response regulator;protein_id=QIE14878.1;transl_table=11 CP040687.1 Genbank gene 950161 951288 . + . ID=gene-IXO1088_004590;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=IXO1088_004590 CP040687.1 Protein Homology CDS 950161 951288 . + 0 ID=cds-QIE14879.1;Parent=gene-IXO1088_004590;Dbxref=NCBI_GP:QIE14879.1;Name=QIE14879.1;gbkey=CDS;gene=hflK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636425.1;locus_tag=IXO1088_004590;product=FtsH protease activity modulator HflK;protein_id=QIE14879.1;transl_table=11 CP040687.1 Genbank gene 951288 952151 . + . ID=gene-IXO1088_004595;Name=IXO1088_004595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004595 CP040687.1 Protein Homology CDS 951288 952151 . + 0 ID=cds-QIE14880.1;Parent=gene-IXO1088_004595;Dbxref=NCBI_GP:QIE14880.1;Name=QIE14880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636426.1;locus_tag=IXO1088_004595;product=protease modulator HflC;protein_id=QIE14880.1;transl_table=11 CP040687.1 Genbank gene 952446 952631 . + . ID=gene-IXO1088_004600;Name=IXO1088_004600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004600 CP040687.1 Protein Homology CDS 952446 952631 . + 0 ID=cds-QIE14881.1;Parent=gene-IXO1088_004600;Dbxref=NCBI_GP:QIE14881.1;Name=QIE14881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257785.1;locus_tag=IXO1088_004600;product=DUF2065 family protein;protein_id=QIE14881.1;transl_table=11 CP040687.1 Genbank gene 952969 954261 . + . ID=gene-IXO1088_004605;Name=IXO1088_004605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004605 CP040687.1 Protein Homology CDS 952969 954261 . + 0 ID=cds-QIE14882.1;Parent=gene-IXO1088_004605;Dbxref=NCBI_GP:QIE14882.1;Name=QIE14882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903917.1;locus_tag=IXO1088_004605;product=adenylosuccinate synthase;protein_id=QIE14882.1;transl_table=11 CP040687.1 Genbank gene 954587 957259 . + . ID=gene-IXO1088_004610;Name=IXO1088_004610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004610 CP040687.1 Protein Homology CDS 954587 957259 . + 0 ID=cds-QIE14883.1;Parent=gene-IXO1088_004610;Dbxref=NCBI_GP:QIE14883.1;Name=QIE14883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368450.1;locus_tag=IXO1088_004610;product=M1 family metallopeptidase;protein_id=QIE14883.1;transl_table=11 CP040687.1 Genbank gene 957453 958235 . - . ID=gene-IXO1088_004615;Name=IXO1088_004615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004615 CP040687.1 Protein Homology CDS 957453 958235 . - 0 ID=cds-QIE14884.1;Parent=gene-IXO1088_004615;Dbxref=NCBI_GP:QIE14884.1;Name=QIE14884.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08845.8;locus_tag=IXO1088_004615;product=IS1595 family transposase;protein_id=QIE14884.1;transl_table=11 CP040687.1 Genbank pseudogene 958346 959722 . - . ID=gene-IXO1088_004620;Name=IXO1088_004620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004620;pseudo=true CP040687.1 Protein Homology CDS 958346 959722 . - 0 ID=cds-IXO1088_004620;Parent=gene-IXO1088_004620;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1088_004620;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 959966 960601 . + . ID=gene-IXO1088_004625;Name=IXO1088_004625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004625 CP040687.1 Protein Homology CDS 959966 960601 . + 0 ID=cds-QIE14885.1;Parent=gene-IXO1088_004625;Dbxref=NCBI_GP:QIE14885.1;Name=QIE14885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303840.1;locus_tag=IXO1088_004625;product=helix-turn-helix transcriptional regulator;protein_id=QIE14885.1;transl_table=11 CP040687.1 Genbank pseudogene 960601 961035 . + . ID=gene-IXO1088_004630;Name=IXO1088_004630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004630;pseudo=true CP040687.1 Protein Homology CDS 960601 961035 . + 0 ID=cds-IXO1088_004630;Parent=gene-IXO1088_004630;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005996136.1;locus_tag=IXO1088_004630;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 961056 961208 . + . ID=gene-IXO1088_004635;Name=IXO1088_004635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004635;pseudo=true CP040687.1 Protein Homology CDS 961056 961208 . + 0 ID=cds-IXO1088_004635;Parent=gene-IXO1088_004635;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258951.1;locus_tag=IXO1088_004635;product=pectate lyase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 961228 961761 . + . ID=gene-IXO1088_004640;Name=IXO1088_004640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004640 CP040687.1 Protein Homology CDS 961228 961761 . + 0 ID=cds-QIE14886.1;Parent=gene-IXO1088_004640;Dbxref=NCBI_GP:QIE14886.1;Name=QIE14886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365472.1;locus_tag=IXO1088_004640;product=hypothetical protein;protein_id=QIE14886.1;transl_table=11 CP040687.1 Genbank gene 961887 962084 . + . ID=gene-IXO1088_004645;Name=IXO1088_004645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004645 CP040687.1 Protein Homology CDS 961887 962084 . + 0 ID=cds-QIE14887.1;Parent=gene-IXO1088_004645;Dbxref=NCBI_GP:QIE14887.1;Name=QIE14887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638687.1;locus_tag=IXO1088_004645;product=zinc-finger domain-containing protein;protein_id=QIE14887.1;transl_table=11 CP040687.1 Genbank gene 962094 963206 . + . ID=gene-IXO1088_004650;Name=IXO1088_004650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004650 CP040687.1 Protein Homology CDS 962094 963206 . + 0 ID=cds-QIE14888.1;Parent=gene-IXO1088_004650;Dbxref=NCBI_GP:QIE14888.1;Name=QIE14888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638686.1;locus_tag=IXO1088_004650;product=glycosyltransferase family 4 protein;protein_id=QIE14888.1;transl_table=11 CP040687.1 Genbank gene 963187 964521 . + . ID=gene-IXO1088_004655;Name=IXO1088_004655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004655 CP040687.1 Protein Homology CDS 963187 964521 . + 0 ID=cds-QIE14889.1;Parent=gene-IXO1088_004655;Dbxref=NCBI_GP:QIE14889.1;Name=QIE14889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172504.1;locus_tag=IXO1088_004655;product=O-antigen ligase family protein;protein_id=QIE14889.1;transl_table=11 CP040687.1 Genbank gene 964755 965675 . - . ID=gene-IXO1088_004660;Name=IXO1088_004660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004660 CP040687.1 Protein Homology CDS 964755 965675 . - 0 ID=cds-QIE14890.1;Parent=gene-IXO1088_004660;Dbxref=NCBI_GP:QIE14890.1;Name=QIE14890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638684.1;locus_tag=IXO1088_004660;product=LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase;protein_id=QIE14890.1;transl_table=11 CP040687.1 Genbank gene 965752 967068 . + . ID=gene-IXO1088_004665;Name=IXO1088_004665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004665 CP040687.1 Protein Homology CDS 965752 967068 . + 0 ID=cds-QIE14891.1;Parent=gene-IXO1088_004665;Dbxref=NCBI_GP:QIE14891.1;Name=QIE14891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638683.1;locus_tag=IXO1088_004665;product=3-deoxy-D-manno-octulosonic acid transferase;protein_id=QIE14891.1;transl_table=11 CP040687.1 Genbank gene 967341 968720 . - . ID=gene-IXO1088_004670;Name=IXO1088_004670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004670 CP040687.1 Protein Homology CDS 967341 968720 . - 0 ID=cds-QIE14892.1;Parent=gene-IXO1088_004670;Dbxref=NCBI_GP:QIE14892.1;Name=QIE14892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638682.1;locus_tag=IXO1088_004670;product=TolC family outer membrane protein;protein_id=QIE14892.1;transl_table=11 CP040687.1 Genbank gene 968741 969397 . - . ID=gene-IXO1088_004675;Name=IXO1088_004675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004675 CP040687.1 Protein Homology CDS 968741 969397 . - 0 ID=cds-QIE14893.1;Parent=gene-IXO1088_004675;Dbxref=NCBI_GP:QIE14893.1;Name=QIE14893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638681.1;locus_tag=IXO1088_004675;product=protein-L-isoaspartate O-methyltransferase;protein_id=QIE14893.1;transl_table=11 CP040687.1 Genbank gene 969526 970179 . - . ID=gene-IXO1088_004680;Name=IXO1088_004680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004680 CP040687.1 Protein Homology CDS 969526 970179 . - 0 ID=cds-QIE14894.1;Parent=gene-IXO1088_004680;Dbxref=NCBI_GP:QIE14894.1;Name=QIE14894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638680.1;locus_tag=IXO1088_004680;product=TetR/AcrR family transcriptional regulator;protein_id=QIE14894.1;transl_table=11 CP040687.1 Genbank gene 970449 970910 . + . ID=gene-IXO1088_004685;Name=IXO1088_004685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004685 CP040687.1 Protein Homology CDS 970449 970910 . + 0 ID=cds-QIE14895.1;Parent=gene-IXO1088_004685;Dbxref=NCBI_GP:QIE14895.1;Name=QIE14895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407687.1;locus_tag=IXO1088_004685;product=hypothetical protein;protein_id=QIE14895.1;transl_table=11 CP040687.1 Genbank gene 971079 972044 . - . ID=gene-IXO1088_004690;Name=IXO1088_004690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004690 CP040687.1 Protein Homology CDS 971079 972044 . - 0 ID=cds-QIE14896.1;Parent=gene-IXO1088_004690;Dbxref=NCBI_GP:QIE14896.1;Name=QIE14896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_004690;product=IS1595 family transposase;protein_id=QIE14896.1;transl_table=11 CP040687.1 Genbank pseudogene 972134 972791 . + . ID=gene-IXO1088_004695;Name=IXO1088_004695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004695;pseudo=true CP040687.1 Protein Homology CDS 972134 972791 . + 0 ID=cds-IXO1088_004695;Parent=gene-IXO1088_004695;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967738.1;locus_tag=IXO1088_004695;product=GGDEF domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 973036 973920 . - . ID=gene-IXO1088_004700;Name=IXO1088_004700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004700 CP040687.1 Protein Homology CDS 973036 973920 . - 0 ID=cds-QIE14897.1;Parent=gene-IXO1088_004700;Dbxref=NCBI_GP:QIE14897.1;Name=QIE14897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849465.1;locus_tag=IXO1088_004700;product=LysR family transcriptional regulator;protein_id=QIE14897.1;transl_table=11 CP040687.1 Genbank gene 974041 975489 . + . ID=gene-IXO1088_004705;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=IXO1088_004705 CP040687.1 Protein Homology CDS 974041 975489 . + 0 ID=cds-QIE14898.1;Parent=gene-IXO1088_004705;Dbxref=NCBI_GP:QIE14898.1;Name=QIE14898.1;gbkey=CDS;gene=leuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091005.1;locus_tag=IXO1088_004705;product=3-isopropylmalate dehydratase large subunit;protein_id=QIE14898.1;transl_table=11 CP040687.1 Genbank gene 975557 976204 . + . ID=gene-IXO1088_004710;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=IXO1088_004710 CP040687.1 Protein Homology CDS 975557 976204 . + 0 ID=cds-QIE14899.1;Parent=gene-IXO1088_004710;Dbxref=NCBI_GP:QIE14899.1;Name=QIE14899.1;gbkey=CDS;gene=leuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638676.1;locus_tag=IXO1088_004710;product=3-isopropylmalate dehydratase small subunit;protein_id=QIE14899.1;transl_table=11 CP040687.1 Genbank pseudogene 976237 976984 . + . ID=gene-IXO1088_004715;Name=IXO1088_004715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004715;pseudo=true CP040687.1 Protein Homology CDS 976237 976984 . + 0 ID=cds-IXO1088_004715;Parent=gene-IXO1088_004715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638675.1;locus_tag=IXO1088_004715;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 977021 978094 . + . ID=gene-IXO1088_004720;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=IXO1088_004720 CP040687.1 Protein Homology CDS 977021 978094 . + 0 ID=cds-QIE14900.1;Parent=gene-IXO1088_004720;Dbxref=NCBI_GP:QIE14900.1;Name=QIE14900.1;gbkey=CDS;gene=leuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638674.1;locus_tag=IXO1088_004720;product=3-isopropylmalate dehydrogenase;protein_id=QIE14900.1;transl_table=11 CP040687.1 Genbank gene 978425 979987 . - . ID=gene-IXO1088_004725;Name=IXO1088_004725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004725 CP040687.1 Protein Homology CDS 978425 979987 . - 0 ID=cds-QIE14901.1;Parent=gene-IXO1088_004725;Dbxref=NCBI_GP:QIE14901.1;Name=QIE14901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638673.1;locus_tag=IXO1088_004725;product=2-isopropylmalate synthase;protein_id=QIE14901.1;transl_table=11 CP040687.1 Genbank gene 979984 981108 . - . ID=gene-IXO1088_004730;Name=IXO1088_004730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004730 CP040687.1 Protein Homology CDS 979984 981108 . - 0 ID=cds-QIE14902.1;Parent=gene-IXO1088_004730;Dbxref=NCBI_GP:QIE14902.1;Name=QIE14902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638672.1;locus_tag=IXO1088_004730;product=threonine dehydratase;protein_id=QIE14902.1;transl_table=11 CP040687.1 Genbank gene 981184 981441 . - . ID=gene-IXO1088_004735;Name=IXO1088_004735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004735 CP040687.1 Protein Homology CDS 981184 981441 . - 0 ID=cds-QIE14903.1;Parent=gene-IXO1088_004735;Dbxref=NCBI_GP:QIE14903.1;Name=QIE14903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638671.1;locus_tag=IXO1088_004735;product=acetolactate synthase;protein_id=QIE14903.1;transl_table=11 CP040687.1 Genbank gene 981425 983146 . - . ID=gene-IXO1088_004740;Name=IXO1088_004740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004740 CP040687.1 Protein Homology CDS 981425 983146 . - 0 ID=cds-QIE14904.1;Parent=gene-IXO1088_004740;Dbxref=NCBI_GP:QIE14904.1;Name=QIE14904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638670.1;locus_tag=IXO1088_004740;product=acetolactate synthase 2 catalytic subunit;protein_id=QIE14904.1;transl_table=11 CP040687.1 Genbank gene 983190 984191 . - . ID=gene-IXO1088_004745;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=IXO1088_004745 CP040687.1 Protein Homology CDS 983190 984191 . - 0 ID=cds-QIE14905.1;Parent=gene-IXO1088_004745;Dbxref=NCBI_GP:QIE14905.1;Name=QIE14905.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638669.1;locus_tag=IXO1088_004745;product=ketol-acid reductoisomerase;protein_id=QIE14905.1;transl_table=11 CP040687.1 Genbank gene 984886 984962 . + . ID=gene-IXO1088_004750;Name=IXO1088_004750;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_004750 CP040687.1 cmsearch ncRNA 984886 984962 . + . ID=rna-IXO1088_004750;Parent=gene-IXO1088_004750;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_004750;product=sX9 sRNA CP040687.1 cmsearch exon 984886 984962 . + . ID=exon-IXO1088_004750-1;Parent=rna-IXO1088_004750;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_004750;product=sX9 sRNA CP040687.1 cmsearch riboswitch 985279 985376 . + . ID=id-CP040687.1:985279..985376;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP040687.1 Genbank gene 985468 987345 . + . ID=gene-IXO1088_004755;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=IXO1088_004755 CP040687.1 Protein Homology CDS 985468 987345 . + 0 ID=cds-QIE14906.1;Parent=gene-IXO1088_004755;Dbxref=NCBI_GP:QIE14906.1;Name=QIE14906.1;gbkey=CDS;gene=thiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407693.1;locus_tag=IXO1088_004755;product=phosphomethylpyrimidine synthase ThiC;protein_id=QIE14906.1;transl_table=11 CP040687.1 Genbank gene 987771 990122 . + . ID=gene-IXO1088_004760;Name=IXO1088_004760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004760 CP040687.1 Protein Homology CDS 987771 990122 . + 0 ID=cds-QIE14907.1;Parent=gene-IXO1088_004760;Dbxref=NCBI_GP:QIE14907.1;Name=QIE14907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364401.1;locus_tag=IXO1088_004760;product=biopolymer transporter Tol;protein_id=QIE14907.1;transl_table=11 CP040687.1 Genbank gene 990233 991126 . + . ID=gene-IXO1088_004765;Name=IXO1088_004765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004765 CP040687.1 Protein Homology CDS 990233 991126 . + 0 ID=cds-QIE14908.1;Parent=gene-IXO1088_004765;Dbxref=NCBI_GP:QIE14908.1;Name=QIE14908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638663.1;locus_tag=IXO1088_004765;product=helix-turn-helix domain-containing protein;protein_id=QIE14908.1;transl_table=11 CP040687.1 Genbank gene 991172 994141 . + . ID=gene-IXO1088_004770;Name=IXO1088_004770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004770 CP040687.1 Protein Homology CDS 991172 994141 . + 0 ID=cds-QIE14909.1;Parent=gene-IXO1088_004770;Dbxref=NCBI_GP:QIE14909.1;Name=QIE14909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638662.1;locus_tag=IXO1088_004770;product=TonB-dependent receptor;protein_id=QIE14909.1;transl_table=11 CP040687.1 Genbank gene 994239 994315 . - . ID=gene-IXO1088_004775;Name=IXO1088_004775;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_004775 CP040687.1 cmsearch ncRNA 994239 994315 . - . ID=rna-IXO1088_004775;Parent=gene-IXO1088_004775;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_004775;product=sX9 sRNA CP040687.1 cmsearch exon 994239 994315 . - . ID=exon-IXO1088_004775-1;Parent=rna-IXO1088_004775;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_004775;product=sX9 sRNA CP040687.1 Genbank gene 994756 995871 . - . ID=gene-IXO1088_004780;Name=IXO1088_004780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004780 CP040687.1 Protein Homology CDS 994756 995871 . - 0 ID=cds-QIE14910.1;Parent=gene-IXO1088_004780;Dbxref=NCBI_GP:QIE14910.1;Name=QIE14910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638661.1;locus_tag=IXO1088_004780;product=HDOD domain-containing protein;protein_id=QIE14910.1;transl_table=11 CP040687.1 Genbank gene 996018 996554 . - . ID=gene-IXO1088_004785;Name=IXO1088_004785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004785 CP040687.1 Protein Homology CDS 996018 996554 . - 0 ID=cds-QIE14911.1;Parent=gene-IXO1088_004785;Dbxref=NCBI_GP:QIE14911.1;Name=QIE14911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638660.1;locus_tag=IXO1088_004785;product=inorganic diphosphatase;protein_id=QIE14911.1;transl_table=11 CP040687.1 Genbank gene 996751 997233 . + . ID=gene-IXO1088_004790;Name=IXO1088_004790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004790 CP040687.1 Protein Homology CDS 996751 997233 . + 0 ID=cds-QIE17864.1;Parent=gene-IXO1088_004790;Dbxref=NCBI_GP:QIE17864.1;Name=QIE17864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638659.1;locus_tag=IXO1088_004790;product=hypothetical protein;protein_id=QIE17864.1;transl_table=11 CP040687.1 Genbank gene 997526 999430 . - . ID=gene-IXO1088_004795;Name=IXO1088_004795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004795 CP040687.1 Protein Homology CDS 997526 999430 . - 0 ID=cds-QIE14912.1;Parent=gene-IXO1088_004795;Dbxref=NCBI_GP:QIE14912.1;Name=QIE14912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017462578.1;locus_tag=IXO1088_004795;product=sodium-translocating pyrophosphatase;protein_id=QIE14912.1;transl_table=11 CP040687.1 Genbank gene 999481 1000437 . + . ID=gene-IXO1088_004800;Name=IXO1088_004800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004800 CP040687.1 Protein Homology CDS 999481 1000437 . + 0 ID=cds-QIE14913.1;Parent=gene-IXO1088_004800;Dbxref=NCBI_GP:QIE14913.1;Name=QIE14913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_004800;product=IS1595 family transposase;protein_id=QIE14913.1;transl_table=11 CP040687.1 Genbank gene 1000434 1000607 . - . ID=gene-IXO1088_004805;Name=IXO1088_004805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004805 CP040687.1 Protein Homology CDS 1000434 1000607 . - 0 ID=cds-QIE17865.1;Parent=gene-IXO1088_004805;Dbxref=NCBI_GP:QIE17865.1;Name=QIE17865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019918556.1;locus_tag=IXO1088_004805;product=hypothetical protein;protein_id=QIE17865.1;transl_table=11 CP040687.1 Genbank gene 1000892 1001383 . + . ID=gene-IXO1088_004810;Name=IXO1088_004810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004810 CP040687.1 Protein Homology CDS 1000892 1001383 . + 0 ID=cds-QIE17866.1;Parent=gene-IXO1088_004810;Dbxref=NCBI_GP:QIE17866.1;Name=QIE17866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364416.1;locus_tag=IXO1088_004810;product=hypothetical protein;protein_id=QIE17866.1;transl_table=11 CP040687.1 Genbank pseudogene 1001527 1002492 . - . ID=gene-IXO1088_004815;Name=IXO1088_004815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004815;pseudo=true CP040687.1 Protein Homology CDS 1001527 1002492 . - 0 ID=cds-IXO1088_004815;Parent=gene-IXO1088_004815;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_004815;product=IS1595 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1002581 1002772 . - . ID=gene-IXO1088_004820;Name=IXO1088_004820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004820;pseudo=true CP040687.1 Protein Homology CDS 1002581 1002772 . - 0 ID=cds-IXO1088_004820;Parent=gene-IXO1088_004820;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_004820;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1003063 1004319 . - . ID=gene-IXO1088_004825;Name=IXO1088_004825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004825 CP040687.1 Protein Homology CDS 1003063 1004319 . - 0 ID=cds-QIE14914.1;Parent=gene-IXO1088_004825;Dbxref=NCBI_GP:QIE14914.1;Name=QIE14914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638638.1;locus_tag=IXO1088_004825;product=6-phosphofructokinase;protein_id=QIE14914.1;transl_table=11 CP040687.1 Genbank gene 1004479 1005042 . + . ID=gene-IXO1088_004830;Name=IXO1088_004830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004830 CP040687.1 Protein Homology CDS 1004479 1005042 . + 0 ID=cds-QIE14915.1;Parent=gene-IXO1088_004830;Dbxref=NCBI_GP:QIE14915.1;Name=QIE14915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638637.1;locus_tag=IXO1088_004830;product=adenylate kinase;protein_id=QIE14915.1;transl_table=11 CP040687.1 Genbank gene 1005409 1006767 . + . ID=gene-IXO1088_004835;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=IXO1088_004835 CP040687.1 Protein Homology CDS 1005409 1006767 . + 0 ID=cds-QIE14916.1;Parent=gene-IXO1088_004835;Dbxref=NCBI_GP:QIE14916.1;Name=QIE14916.1;gbkey=CDS;gene=mpl;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638636.1;locus_tag=IXO1088_004835;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=QIE14916.1;transl_table=11 CP040687.1 Genbank gene 1006767 1007363 . + . ID=gene-IXO1088_004840;Name=IXO1088_004840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004840 CP040687.1 Protein Homology CDS 1006767 1007363 . + 0 ID=cds-QIE14917.1;Parent=gene-IXO1088_004840;Dbxref=NCBI_GP:QIE14917.1;Name=QIE14917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305271.1;locus_tag=IXO1088_004840;product=ATP-dependent protease;protein_id=QIE14917.1;transl_table=11 CP040687.1 Genbank gene 1007510 1008394 . + . ID=gene-IXO1088_004845;Name=IXO1088_004845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004845 CP040687.1 Protein Homology CDS 1007510 1008394 . + 0 ID=cds-QIE14918.1;Parent=gene-IXO1088_004845;Dbxref=NCBI_GP:QIE14918.1;Name=QIE14918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638634.1;locus_tag=IXO1088_004845;product=hypothetical protein;protein_id=QIE14918.1;transl_table=11 CP040687.1 Genbank pseudogene 1008696 1008836 . - . ID=gene-IXO1088_004850;Name=IXO1088_004850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004850;pseudo=true CP040687.1 Protein Homology CDS 1008696 1008836 . - 0 ID=cds-IXO1088_004850;Parent=gene-IXO1088_004850;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409568.1;locus_tag=IXO1088_004850;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1008782 1009357 . - . ID=gene-IXO1088_004855;Name=IXO1088_004855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004855;pseudo=true CP040687.1 Protein Homology CDS 1008782 1009357 . - 0 ID=cds-IXO1088_004855;Parent=gene-IXO1088_004855;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_004855;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1009367 1010165 . - . ID=gene-IXO1088_004860;Name=IXO1088_004860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004860 CP040687.1 Protein Homology CDS 1009894 1010165 . - 0 ID=cds-QIE14919.1;Parent=gene-IXO1088_004860;Dbxref=NCBI_GP:QIE14919.1;Name=QIE14919.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_004860;product=IS5 family transposase;protein_id=QIE14919.1;transl_table=11 CP040687.1 Protein Homology CDS 1009367 1009895 . - 1 ID=cds-QIE14919.1;Parent=gene-IXO1088_004860;Dbxref=NCBI_GP:QIE14919.1;Name=QIE14919.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_004860;product=IS5 family transposase;protein_id=QIE14919.1;transl_table=11 CP040687.1 Genbank pseudogene 1010212 1011435 . + . ID=gene-IXO1088_004865;Name=IXO1088_004865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004865;pseudo=true CP040687.1 Protein Homology CDS 1010212 1011435 . + 0 ID=cds-IXO1088_004865;Parent=gene-IXO1088_004865;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_004865;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1011603 1012366 . - . ID=gene-IXO1088_004870;Name=IXO1088_004870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004870 CP040687.1 Protein Homology CDS 1012051 1012366 . - 0 ID=cds-QIE14920.1;Parent=gene-IXO1088_004870;Dbxref=NCBI_GP:QIE14920.1;Name=QIE14920.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_004870;product=IS5 family transposase;protein_id=QIE14920.1;transl_table=11 CP040687.1 Protein Homology CDS 1011603 1012051 . - 2 ID=cds-QIE14920.1;Parent=gene-IXO1088_004870;Dbxref=NCBI_GP:QIE14920.1;Name=QIE14920.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_004870;product=IS5 family transposase;protein_id=QIE14920.1;transl_table=11 CP040687.1 Genbank gene 1012377 1013558 . - . ID=gene-IXO1088_004875;Name=IXO1088_004875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004875 CP040687.1 Protein Homology CDS 1012377 1013558 . - 0 ID=cds-QIE14921.1;Parent=gene-IXO1088_004875;Dbxref=NCBI_GP:QIE14921.1;Name=QIE14921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611813.1;locus_tag=IXO1088_004875;product=IS4 family transposase;protein_id=QIE14921.1;transl_table=11 CP040687.1 Genbank gene 1013625 1014388 . + . ID=gene-IXO1088_004880;Name=IXO1088_004880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004880 CP040687.1 Protein Homology CDS 1013625 1013940 . + 0 ID=cds-QIE14922.1;Parent=gene-IXO1088_004880;Dbxref=NCBI_GP:QIE14922.1;Name=QIE14922.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_004880;product=IS5 family transposase;protein_id=QIE14922.1;transl_table=11 CP040687.1 Protein Homology CDS 1013940 1014388 . + 2 ID=cds-QIE14922.1;Parent=gene-IXO1088_004880;Dbxref=NCBI_GP:QIE14922.1;Name=QIE14922.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_004880;product=IS5 family transposase;protein_id=QIE14922.1;transl_table=11 CP040687.1 Genbank gene 1014456 1016033 . - . ID=gene-IXO1088_004885;Name=IXO1088_004885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004885 CP040687.1 Protein Homology CDS 1014456 1016033 . - 0 ID=cds-QIE14923.1;Parent=gene-IXO1088_004885;Dbxref=NCBI_GP:QIE14923.1;Name=QIE14923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574603.1;locus_tag=IXO1088_004885;product=hypothetical protein;protein_id=QIE14923.1;transl_table=11 CP040687.1 Genbank gene 1016335 1017300 . - . ID=gene-IXO1088_004890;Name=IXO1088_004890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004890 CP040687.1 Protein Homology CDS 1016335 1017300 . - 0 ID=cds-QIE14924.1;Parent=gene-IXO1088_004890;Dbxref=NCBI_GP:QIE14924.1;Name=QIE14924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_004890;product=IS1595-like element ISXo5 family transposase;protein_id=QIE14924.1;transl_table=11 CP040687.1 Genbank gene 1017389 1018152 . - . ID=gene-IXO1088_004895;Name=IXO1088_004895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004895 CP040687.1 Protein Homology CDS 1017837 1018152 . - 0 ID=cds-QIE14925.1;Parent=gene-IXO1088_004895;Dbxref=NCBI_GP:QIE14925.1;Name=QIE14925.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_004895;product=IS5 family transposase;protein_id=QIE14925.1;transl_table=11 CP040687.1 Protein Homology CDS 1017389 1017837 . - 2 ID=cds-QIE14925.1;Parent=gene-IXO1088_004895;Dbxref=NCBI_GP:QIE14925.1;Name=QIE14925.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_004895;product=IS5 family transposase;protein_id=QIE14925.1;transl_table=11 CP040687.1 Genbank pseudogene 1018308 1019075 . + . ID=gene-IXO1088_004900;Name=IXO1088_004900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004900;pseudo=true CP040687.1 Protein Homology CDS 1018308 1019075 . + 0 ID=cds-IXO1088_004900;Parent=gene-IXO1088_004900;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349161.1;locus_tag=IXO1088_004900;product=pseudouridylate synthase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1019149 1020468 . + . ID=gene-IXO1088_004905;Name=IXO1088_004905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004905 CP040687.1 Protein Homology CDS 1019149 1020468 . + 0 ID=cds-QIE14926.1;Parent=gene-IXO1088_004905;Dbxref=NCBI_GP:QIE14926.1;Name=QIE14926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_004905;product=IS701 family transposase;protein_id=QIE14926.1;transl_table=11 CP040687.1 Genbank pseudogene 1020414 1020554 . + . ID=gene-IXO1088_004910;Name=IXO1088_004910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004910;pseudo=true CP040687.1 Protein Homology CDS 1020414 1020554 . + 0 ID=cds-IXO1088_004910;Parent=gene-IXO1088_004910;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409568.1;locus_tag=IXO1088_004910;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1020564 1021362 . - . ID=gene-IXO1088_004915;Name=IXO1088_004915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004915 CP040687.1 Protein Homology CDS 1021091 1021362 . - 0 ID=cds-QIE14927.1;Parent=gene-IXO1088_004915;Dbxref=NCBI_GP:QIE14927.1;Name=QIE14927.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_004915;product=IS5 family transposase;protein_id=QIE14927.1;transl_table=11 CP040687.1 Protein Homology CDS 1020564 1021092 . - 1 ID=cds-QIE14927.1;Parent=gene-IXO1088_004915;Dbxref=NCBI_GP:QIE14927.1;Name=QIE14927.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_004915;product=IS5 family transposase;protein_id=QIE14927.1;transl_table=11 CP040687.1 Genbank pseudogene 1021411 1021533 . + . ID=gene-IXO1088_004920;Name=IXO1088_004920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004920;pseudo=true CP040687.1 Protein Homology CDS 1021411 1021533 . + 0 ID=cds-IXO1088_004920;Parent=gene-IXO1088_004920;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005997018.1;locus_tag=IXO1088_004920;product=pseudouridylate synthase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1021550 1022473 . - . ID=gene-IXO1088_004925;Name=IXO1088_004925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004925 CP040687.1 Protein Homology CDS 1021550 1022473 . - 0 ID=cds-QIE17867.1;Parent=gene-IXO1088_004925;Dbxref=NCBI_GP:QIE17867.1;Name=QIE17867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_082322974.1;locus_tag=IXO1088_004925;product=IS30 family transposase;protein_id=QIE17867.1;transl_table=11 CP040687.1 Genbank pseudogene 1022498 1023063 . + . ID=gene-IXO1088_004930;Name=IXO1088_004930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004930;pseudo=true CP040687.1 Protein Homology CDS 1022498 1023063 . + 0 ID=cds-IXO1088_004930;Parent=gene-IXO1088_004930;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1088_004930;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1023218 1024537 . + . ID=gene-IXO1088_004935;Name=IXO1088_004935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004935 CP040687.1 Protein Homology CDS 1023218 1024537 . + 0 ID=cds-QIE14928.1;Parent=gene-IXO1088_004935;Dbxref=NCBI_GP:QIE14928.1;Name=QIE14928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_004935;product=IS701 family transposase;protein_id=QIE14928.1;transl_table=11 CP040687.1 Genbank pseudogene 1024647 1025720 . + . ID=gene-IXO1088_004940;Name=IXO1088_004940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004940;pseudo=true CP040687.1 Protein Homology CDS 1024647 1025720 . + 0 ID=cds-IXO1088_004940;Parent=gene-IXO1088_004940;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1088_004940;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1025729 1026745 . - . ID=gene-IXO1088_004945;Name=IXO1088_004945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004945;pseudo=true CP040687.1 Protein Homology CDS 1025729 1026745 . - 0 ID=cds-IXO1088_004945;Parent=gene-IXO1088_004945;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557986.1;locus_tag=IXO1088_004945;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1026827 1027792 . + . ID=gene-IXO1088_004950;Name=IXO1088_004950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004950;pseudo=true CP040687.1 Protein Homology CDS 1026827 1027792 . + 0 ID=cds-IXO1088_004950;Parent=gene-IXO1088_004950;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_004950;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1027862 1028167 . + . ID=gene-IXO1088_004955;Name=IXO1088_004955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004955;pseudo=true CP040687.1 Protein Homology CDS 1027862 1028167 . + 0 ID=cds-IXO1088_004955;Parent=gene-IXO1088_004955;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=IXO1088_004955;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1028189 1028740 . + . ID=gene-IXO1088_004960;Name=IXO1088_004960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004960;pseudo=true CP040687.1 Protein Homology CDS 1028189 1028740 . + 0 ID=cds-IXO1088_004960;Parent=gene-IXO1088_004960;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612183.1;locus_tag=IXO1088_004960;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1028934 1029146 . + . ID=gene-IXO1088_004965;Name=IXO1088_004965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004965;pseudo=true CP040687.1 Protein Homology CDS 1028934 1029146 . + 0 ID=cds-IXO1088_004965;Parent=gene-IXO1088_004965;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408039.1;locus_tag=IXO1088_004965;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1029225 1030115 . + . ID=gene-IXO1088_004970;Name=IXO1088_004970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004970 CP040687.1 Protein Homology CDS 1029225 1030115 . + 0 ID=cds-QIE17868.1;Parent=gene-IXO1088_004970;Dbxref=NCBI_GP:QIE17868.1;Name=QIE17868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013094599.1;locus_tag=IXO1088_004970;product=trypsin-like serine protease;protein_id=QIE17868.1;transl_table=11 CP040687.1 Genbank pseudogene 1030142 1030714 . - . ID=gene-IXO1088_004975;Name=IXO1088_004975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004975;pseudo=true CP040687.1 Protein Homology CDS 1030142 1030714 . - 0 ID=cds-IXO1088_004975;Parent=gene-IXO1088_004975;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347842.1;locus_tag=IXO1088_004975;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1030729 1031964 . - . ID=gene-IXO1088_004980;Name=IXO1088_004980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_004980 CP040687.1 Protein Homology CDS 1030729 1031964 . - 0 ID=cds-QIE14929.1;Parent=gene-IXO1088_004980;Dbxref=NCBI_GP:QIE14929.1;Name=QIE14929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1088_004980;product=ISL3-like element ISXoo13 family transposase;protein_id=QIE14929.1;transl_table=11 CP040687.1 Genbank pseudogene 1032026 1032460 . - . ID=gene-IXO1088_004985;Name=IXO1088_004985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004985;pseudo=true CP040687.1 Protein Homology CDS 1032026 1032460 . - 0 ID=cds-IXO1088_004985;Parent=gene-IXO1088_004985;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611270.1;locus_tag=IXO1088_004985;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1032479 1033582 . - . ID=gene-IXO1088_004990;Name=IXO1088_004990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004990;pseudo=true CP040687.1 Protein Homology CDS 1032479 1033582 . - 0 ID=cds-IXO1088_004990;Parent=gene-IXO1088_004990;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1088_004990;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1033652 1034035 . - . ID=gene-IXO1088_004995;Name=IXO1088_004995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_004995;pseudo=true CP040687.1 Protein Homology CDS 1033652 1034035 . - 0 ID=cds-IXO1088_004995;Parent=gene-IXO1088_004995;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041183487.1;locus_tag=IXO1088_004995;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1034288 1034806 . + . ID=gene-IXO1088_005000;Name=IXO1088_005000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005000 CP040687.1 Protein Homology CDS 1034288 1034806 . + 0 ID=cds-QIE14930.1;Parent=gene-IXO1088_005000;Dbxref=NCBI_GP:QIE14930.1;Name=QIE14930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993394.1;locus_tag=IXO1088_005000;product=disulfide bond formation protein B;protein_id=QIE14930.1;transl_table=11 CP040687.1 Genbank gene 1035335 1037458 . - . ID=gene-IXO1088_005005;Name=IXO1088_005005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005005 CP040687.1 Protein Homology CDS 1035335 1037458 . - 0 ID=cds-QIE14931.1;Parent=gene-IXO1088_005005;Dbxref=NCBI_GP:QIE14931.1;Name=QIE14931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089489.1;locus_tag=IXO1088_005005;product=TonB-dependent receptor;protein_id=QIE14931.1;transl_table=11 CP040687.1 Genbank gene 1037598 1037792 . - . ID=gene-IXO1088_005010;Name=IXO1088_005010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005010 CP040687.1 Protein Homology CDS 1037598 1037792 . - 0 ID=cds-QIE14932.1;Parent=gene-IXO1088_005010;Dbxref=NCBI_GP:QIE14932.1;Name=QIE14932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300719.1;locus_tag=IXO1088_005010;product=hypothetical protein;protein_id=QIE14932.1;transl_table=11 CP040687.1 Genbank gene 1037706 1039088 . + . ID=gene-IXO1088_005015;Name=IXO1088_005015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005015 CP040687.1 Protein Homology CDS 1037706 1039088 . + 0 ID=cds-QIE14933.1;Parent=gene-IXO1088_005015;Dbxref=NCBI_GP:QIE14933.1;Name=QIE14933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156224.1;locus_tag=IXO1088_005015;product=3-deoxy-7-phosphoheptulonate synthase class II;protein_id=QIE14933.1;transl_table=11 CP040687.1 Genbank gene 1039189 1040316 . + . ID=gene-IXO1088_005020;Name=IXO1088_005020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005020 CP040687.1 Protein Homology CDS 1039189 1040316 . + 0 ID=cds-QIE14934.1;Parent=gene-IXO1088_005020;Dbxref=NCBI_GP:QIE14934.1;Name=QIE14934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636309.1;locus_tag=IXO1088_005020;product=mechanosensitive ion channel;protein_id=QIE14934.1;transl_table=11 CP040687.1 Genbank pseudogene 1040467 1041016 . - . ID=gene-IXO1088_005025;Name=IXO1088_005025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005025;pseudo=true CP040687.1 Protein Homology CDS 1040467 1041016 . - 0 ID=cds-IXO1088_005025;Parent=gene-IXO1088_005025;Note=catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia%3B frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050643.1;locus_tag=IXO1088_005025;product=amidase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1041239 1041709 . - . ID=gene-IXO1088_005030;Name=IXO1088_005030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005030 CP040687.1 Protein Homology CDS 1041239 1041709 . - 0 ID=cds-QIE14935.1;Parent=gene-IXO1088_005030;Dbxref=NCBI_GP:QIE14935.1;Name=QIE14935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636311.1;locus_tag=IXO1088_005030;product=DUF2127 domain-containing protein;protein_id=QIE14935.1;transl_table=11 CP040687.1 Genbank gene 1041728 1043557 . - . ID=gene-IXO1088_005035;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=IXO1088_005035 CP040687.1 Protein Homology CDS 1041728 1043557 . - 0 ID=cds-QIE14936.1;Parent=gene-IXO1088_005035;Dbxref=NCBI_GP:QIE14936.1;Name=QIE14936.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636312.2;locus_tag=IXO1088_005035;product=translational GTPase TypA;protein_id=QIE14936.1;transl_table=11 CP040687.1 Genbank gene 1043801 1044295 . + . ID=gene-IXO1088_005040;Name=IXO1088_005040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005040 CP040687.1 Protein Homology CDS 1043801 1044295 . + 0 ID=cds-QIE14937.1;Parent=gene-IXO1088_005040;Dbxref=NCBI_GP:QIE14937.1;Name=QIE14937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636313.1;locus_tag=IXO1088_005040;product=peptidylprolyl isomerase;protein_id=QIE14937.1;transl_table=11 CP040687.1 Genbank gene 1044411 1045397 . + . ID=gene-IXO1088_005045;Name=IXO1088_005045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005045 CP040687.1 Protein Homology CDS 1044411 1045397 . + 0 ID=cds-QIE14938.1;Parent=gene-IXO1088_005045;Dbxref=NCBI_GP:QIE14938.1;Name=QIE14938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439107.1;locus_tag=IXO1088_005045;product=malate dehydrogenase;protein_id=QIE14938.1;transl_table=11 CP040687.1 Genbank pseudogene 1045481 1046096 . - . ID=gene-IXO1088_005050;Name=IXO1088_005050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005050;pseudo=true CP040687.1 Protein Homology CDS 1045481 1046096 . - 0 ID=cds-IXO1088_005050;Parent=gene-IXO1088_005050;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486641.1;locus_tag=IXO1088_005050;product=glutathione S-transferase family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1046338 1047136 . + . ID=gene-IXO1088_005055;Name=IXO1088_005055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005055 CP040687.1 Protein Homology CDS 1046338 1046609 . + 0 ID=cds-QIE14939.1;Parent=gene-IXO1088_005055;Dbxref=NCBI_GP:QIE14939.1;Name=QIE14939.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_005055;product=IS5 family transposase;protein_id=QIE14939.1;transl_table=11 CP040687.1 Protein Homology CDS 1046608 1047136 . + 1 ID=cds-QIE14939.1;Parent=gene-IXO1088_005055;Dbxref=NCBI_GP:QIE14939.1;Name=QIE14939.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_005055;product=IS5 family transposase;protein_id=QIE14939.1;transl_table=11 CP040687.1 Genbank pseudogene 1047161 1047283 . - . ID=gene-IXO1088_005060;Name=IXO1088_005060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005060;pseudo=true CP040687.1 Protein Homology CDS 1047161 1047283 . - 0 ID=cds-IXO1088_005060;Parent=gene-IXO1088_005060;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445108.1;locus_tag=IXO1088_005060;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1047286 1048221 . - . ID=gene-IXO1088_005065;Name=IXO1088_005065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005065;pseudo=true CP040687.1 Protein Homology CDS 1047286 1048221 . - 0 ID=cds-IXO1088_005065;Parent=gene-IXO1088_005065;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_005065;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1048241 1049455 . - . ID=gene-IXO1088_005070;Name=IXO1088_005070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005070 CP040687.1 Protein Homology CDS 1048241 1049455 . - 0 ID=cds-QIE14940.1;Parent=gene-IXO1088_005070;Dbxref=NCBI_GP:QIE14940.1;Name=QIE14940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1088_005070;product=IS4-like element ISXo14 family transposase;protein_id=QIE14940.1;transl_table=11 CP040687.1 Genbank pseudogene 1049492 1049584 . + . ID=gene-IXO1088_005075;Name=IXO1088_005075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005075;pseudo=true CP040687.1 Protein Homology CDS 1049492 1049584 . + 0 ID=cds-IXO1088_005075;Parent=gene-IXO1088_005075;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257538.1;locus_tag=IXO1088_005075;product=alcohol dehydrogenase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1049573 1049740 . - . ID=gene-IXO1088_005080;Name=IXO1088_005080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005080;pseudo=true CP040687.1 Protein Homology CDS 1049573 1049740 . - 0 ID=cds-IXO1088_005080;Parent=gene-IXO1088_005080;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257114.1;locus_tag=IXO1088_005080;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1049877 1050845 . - . ID=gene-IXO1088_005085;Name=IXO1088_005085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005085 CP040687.1 Protein Homology CDS 1049877 1050845 . - 0 ID=cds-QIE14941.1;Parent=gene-IXO1088_005085;Dbxref=NCBI_GP:QIE14941.1;Name=QIE14941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_005085;product=IS5-like element ISXo1 family transposase;protein_id=QIE14941.1;transl_table=11 CP040687.1 Genbank gene 1050848 1051129 . + . ID=gene-IXO1088_005090;Name=IXO1088_005090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005090 CP040687.1 Protein Homology CDS 1050848 1051129 . + 0 ID=cds-QIE14942.1;Parent=gene-IXO1088_005090;Dbxref=NCBI_GP:QIE14942.1;Name=QIE14942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259716.1;locus_tag=IXO1088_005090;product=hypothetical protein;protein_id=QIE14942.1;transl_table=11 CP040687.1 Genbank gene 1051106 1051567 . - . ID=gene-IXO1088_005095;Name=IXO1088_005095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005095 CP040687.1 Protein Homology CDS 1051106 1051567 . - 0 ID=cds-QIE14943.1;Parent=gene-IXO1088_005095;Dbxref=NCBI_GP:QIE14943.1;Name=QIE14943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003470606.1;locus_tag=IXO1088_005095;product=cell wall hydrolase;protein_id=QIE14943.1;transl_table=11 CP040687.1 Genbank gene 1052116 1052358 . - . ID=gene-IXO1088_005100;Name=IXO1088_005100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005100 CP040687.1 Protein Homology CDS 1052116 1052358 . - 0 ID=cds-QIE14944.1;Parent=gene-IXO1088_005100;Dbxref=NCBI_GP:QIE14944.1;Name=QIE14944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445975.1;locus_tag=IXO1088_005100;product=glycerophosphodiester phosphodiesterase;protein_id=QIE14944.1;transl_table=11 CP040687.1 Genbank gene 1052352 1053115 . - . ID=gene-IXO1088_005105;Name=IXO1088_005105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005105 CP040687.1 Protein Homology CDS 1052800 1053115 . - 0 ID=cds-QIE14945.1;Parent=gene-IXO1088_005105;Dbxref=NCBI_GP:QIE14945.1;Name=QIE14945.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_005105;product=IS5 family transposase;protein_id=QIE14945.1;transl_table=11 CP040687.1 Protein Homology CDS 1052352 1052800 . - 2 ID=cds-QIE14945.1;Parent=gene-IXO1088_005105;Dbxref=NCBI_GP:QIE14945.1;Name=QIE14945.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_005105;product=IS5 family transposase;protein_id=QIE14945.1;transl_table=11 CP040687.1 Genbank gene 1053148 1053876 . - . ID=gene-IXO1088_005110;Name=IXO1088_005110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005110 CP040687.1 Protein Homology CDS 1053148 1053876 . - 0 ID=cds-QIE17869.1;Parent=gene-IXO1088_005110;Dbxref=NCBI_GP:QIE17869.1;Name=QIE17869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407722.1;locus_tag=IXO1088_005110;product=glycerophosphodiester phosphodiesterase family protein;protein_id=QIE17869.1;transl_table=11 CP040687.1 Genbank pseudogene 1053873 1054567 . - . ID=gene-IXO1088_005115;Name=IXO1088_005115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005115;pseudo=true CP040687.1 Protein Homology CDS 1053873 1054567 . - 0 ID=cds-IXO1088_005115;Parent=gene-IXO1088_005115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502182.1;locus_tag=IXO1088_005115;product=TonB-dependent receptor;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1055109 1055750 . - . ID=gene-IXO1088_005120;Name=IXO1088_005120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005120 CP040687.1 Protein Homology CDS 1055109 1055750 . - 0 ID=cds-QIE14946.1;Parent=gene-IXO1088_005120;Dbxref=NCBI_GP:QIE14946.1;Name=QIE14946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300708.1;locus_tag=IXO1088_005120;product=hypothetical protein;protein_id=QIE14946.1;transl_table=11 CP040687.1 Genbank pseudogene 1055790 1056319 . - . ID=gene-IXO1088_005125;Name=IXO1088_005125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005125;pseudo=true CP040687.1 Protein Homology CDS 1055790 1056319 . - 0 ID=cds-IXO1088_005125;Parent=gene-IXO1088_005125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300707.1;locus_tag=IXO1088_005125;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1056370 1057472 . - . ID=gene-IXO1088_005130;Name=IXO1088_005130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005130;pseudo=true CP040687.1 Protein Homology CDS 1056370 1057472 . - 0 ID=cds-IXO1088_005130;Parent=gene-IXO1088_005130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1088_005130;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1057521 1058891 . - . ID=gene-IXO1088_005135;Name=IXO1088_005135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005135 CP040687.1 Protein Homology CDS 1057521 1058891 . - 0 ID=cds-QIE14947.1;Parent=gene-IXO1088_005135;Dbxref=NCBI_GP:QIE14947.1;Name=QIE14947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260131.1;locus_tag=IXO1088_005135;product=MFS transporter;protein_id=QIE14947.1;transl_table=11 CP040687.1 Genbank gene 1058990 1061029 . - . ID=gene-IXO1088_005140;Name=IXO1088_005140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005140 CP040687.1 Protein Homology CDS 1058990 1061029 . - 0 ID=cds-QIE14948.1;Parent=gene-IXO1088_005140;Dbxref=NCBI_GP:QIE14948.1;Name=QIE14948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636319.1;locus_tag=IXO1088_005140;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=QIE14948.1;transl_table=11 CP040687.1 Genbank gene 1061237 1062259 . - . ID=gene-IXO1088_005145;Name=IXO1088_005145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005145 CP040687.1 Protein Homology CDS 1061237 1062259 . - 0 ID=cds-QIE14949.1;Parent=gene-IXO1088_005145;Dbxref=NCBI_GP:QIE14949.1;Name=QIE14949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636320.1;locus_tag=IXO1088_005145;product=zinc-binding alcohol dehydrogenase family protein;protein_id=QIE14949.1;transl_table=11 CP040687.1 Genbank gene 1062233 1062427 . + . ID=gene-IXO1088_005150;Name=IXO1088_005150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005150 CP040687.1 Protein Homology CDS 1062233 1062427 . + 0 ID=cds-QIE14950.1;Parent=gene-IXO1088_005150;Dbxref=NCBI_GP:QIE14950.1;Name=QIE14950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571650.1;locus_tag=IXO1088_005150;product=hypothetical protein;protein_id=QIE14950.1;transl_table=11 CP040687.1 Genbank gene 1062675 1063772 . + . ID=gene-IXO1088_005155;Name=IXO1088_005155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005155 CP040687.1 Protein Homology CDS 1062675 1063772 . + 0 ID=cds-QIE14951.1;Parent=gene-IXO1088_005155;Dbxref=NCBI_GP:QIE14951.1;Name=QIE14951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636321.1;locus_tag=IXO1088_005155;product=hypothetical protein;protein_id=QIE14951.1;transl_table=11 CP040687.1 Genbank gene 1063965 1064474 . + . ID=gene-IXO1088_005160;Name=IXO1088_005160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005160 CP040687.1 Protein Homology CDS 1063965 1064474 . + 0 ID=cds-QIE14952.1;Parent=gene-IXO1088_005160;Dbxref=NCBI_GP:QIE14952.1;Name=QIE14952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636322.1;locus_tag=IXO1088_005160;product=hypothetical protein;protein_id=QIE14952.1;transl_table=11 CP040687.1 Genbank gene 1064494 1065354 . + . ID=gene-IXO1088_005165;Name=IXO1088_005165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005165 CP040687.1 Protein Homology CDS 1064494 1065354 . + 0 ID=cds-QIE14953.1;Parent=gene-IXO1088_005165;Dbxref=NCBI_GP:QIE14953.1;Name=QIE14953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636323.1;locus_tag=IXO1088_005165;product=rRNA pseudouridine synthase;protein_id=QIE14953.1;transl_table=11 CP040687.1 Genbank pseudogene 1065305 1065697 . - . ID=gene-IXO1088_005170;Name=IXO1088_005170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005170;pseudo=true CP040687.1 Protein Homology CDS 1065305 1065697 . - 0 ID=cds-IXO1088_005170;Parent=gene-IXO1088_005170;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156233.1;locus_tag=IXO1088_005170;product=HNH endonuclease;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1065700 1066908 . - . ID=gene-IXO1088_005175;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=IXO1088_005175 CP040687.1 Protein Homology CDS 1065700 1066908 . - 0 ID=cds-QIE14954.1;Parent=gene-IXO1088_005175;Dbxref=NCBI_GP:QIE14954.1;Name=QIE14954.1;gbkey=CDS;gene=kbl;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260125.1;locus_tag=IXO1088_005175;product=glycine C-acetyltransferase;protein_id=QIE14954.1;transl_table=11 CP040687.1 Genbank gene 1066999 1068096 . + . ID=gene-IXO1088_005180;Name=IXO1088_005180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005180 CP040687.1 Protein Homology CDS 1066999 1068096 . + 0 ID=cds-QIE14955.1;Parent=gene-IXO1088_005180;Dbxref=NCBI_GP:QIE14955.1;Name=QIE14955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089499.1;locus_tag=IXO1088_005180;product=sulfate ABC transporter substrate-binding protein;protein_id=QIE14955.1;transl_table=11 CP040687.1 Genbank gene 1068100 1068960 . + . ID=gene-IXO1088_005185;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=IXO1088_005185 CP040687.1 Protein Homology CDS 1068100 1068960 . + 0 ID=cds-QIE14956.1;Parent=gene-IXO1088_005185;Dbxref=NCBI_GP:QIE14956.1;Name=QIE14956.1;gbkey=CDS;gene=cysT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636327.1;locus_tag=IXO1088_005185;product=sulfate ABC transporter permease subunit CysT;protein_id=QIE14956.1;transl_table=11 CP040687.1 Genbank gene 1068957 1069910 . + . ID=gene-IXO1088_005190;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=IXO1088_005190 CP040687.1 Protein Homology CDS 1068957 1069910 . + 0 ID=cds-QIE14957.1;Parent=gene-IXO1088_005190;Dbxref=NCBI_GP:QIE14957.1;Name=QIE14957.1;gbkey=CDS;gene=cysW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636328.1;locus_tag=IXO1088_005190;product=sulfate ABC transporter permease subunit CysW;protein_id=QIE14957.1;transl_table=11 CP040687.1 Genbank gene 1069918 1070952 . + . ID=gene-IXO1088_005195;Name=IXO1088_005195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005195 CP040687.1 Protein Homology CDS 1069918 1070952 . + 0 ID=cds-QIE14958.1;Parent=gene-IXO1088_005195;Dbxref=NCBI_GP:QIE14958.1;Name=QIE14958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305108.1;locus_tag=IXO1088_005195;product=sulfate/molybdate ABC transporter ATP-binding protein;protein_id=QIE14958.1;transl_table=11 CP040687.1 Genbank gene 1071306 1072019 . + . ID=gene-IXO1088_005200;Name=IXO1088_005200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005200 CP040687.1 Protein Homology CDS 1071306 1072019 . + 0 ID=cds-QIE14959.1;Parent=gene-IXO1088_005200;Dbxref=NCBI_GP:QIE14959.1;Name=QIE14959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368589.1;locus_tag=IXO1088_005200;product=hypothetical protein;protein_id=QIE14959.1;transl_table=11 CP040687.1 Genbank gene 1072089 1073111 . - . ID=gene-IXO1088_005205;Name=IXO1088_005205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005205 CP040687.1 Protein Homology CDS 1072089 1073111 . - 0 ID=cds-QIE17870.1;Parent=gene-IXO1088_005205;Dbxref=NCBI_GP:QIE17870.1;Name=QIE17870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636331.1;locus_tag=IXO1088_005205;product=L-threonine 3-dehydrogenase;protein_id=QIE17870.1;transl_table=11 CP040687.1 Genbank pseudogene 1073268 1073586 . - . ID=gene-IXO1088_005210;Name=IXO1088_005210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005210;pseudo=true CP040687.1 Protein Homology CDS 1073268 1073586 . - 0 ID=cds-IXO1088_005210;Parent=gene-IXO1088_005210;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915875.1;locus_tag=IXO1088_005210;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1073626 1075959 . - . ID=gene-IXO1088_005215;Name=IXO1088_005215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005215 CP040687.1 Protein Homology CDS 1073626 1075959 . - 0 ID=cds-QIE14960.1;Parent=gene-IXO1088_005215;Dbxref=NCBI_GP:QIE14960.1;Name=QIE14960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571636.1;locus_tag=IXO1088_005215;product=TonB-dependent receptor;protein_id=QIE14960.1;transl_table=11 CP040687.1 Genbank pseudogene 1075958 1078004 . + . ID=gene-IXO1088_005220;Name=IXO1088_005220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005220;pseudo=true CP040687.1 Protein Homology CDS 1075958 1078004 . + 0 ID=cds-IXO1088_005220;Parent=gene-IXO1088_005220;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017914878.1;locus_tag=IXO1088_005220;product=phospholipase C%2C phosphocholine-specific;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1078171 1080321 . + . ID=gene-IXO1088_005225;Name=IXO1088_005225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005225 CP040687.1 Protein Homology CDS 1078171 1080321 . + 0 ID=cds-QIE14961.1;Parent=gene-IXO1088_005225;Dbxref=NCBI_GP:QIE14961.1;Name=QIE14961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409302.1;locus_tag=IXO1088_005225;product=S46 family peptidase;protein_id=QIE14961.1;transl_table=11 CP040687.1 Genbank gene 1080413 1081057 . + . ID=gene-IXO1088_005230;Name=IXO1088_005230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005230 CP040687.1 Protein Homology CDS 1080413 1081057 . + 0 ID=cds-QIE14962.1;Parent=gene-IXO1088_005230;Dbxref=NCBI_GP:QIE14962.1;Name=QIE14962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017910762.1;locus_tag=IXO1088_005230;product=histidine phosphatase family protein;protein_id=QIE14962.1;transl_table=11 CP040687.1 Genbank gene 1081770 1081846 . - . ID=gene-IXO1088_005235;Name=IXO1088_005235;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_005235 CP040687.1 cmsearch ncRNA 1081770 1081846 . - . ID=rna-IXO1088_005235;Parent=gene-IXO1088_005235;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_005235;product=sX9 sRNA CP040687.1 cmsearch exon 1081770 1081846 . - . ID=exon-IXO1088_005235-1;Parent=rna-IXO1088_005235;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_005235;product=sX9 sRNA CP040687.1 Genbank gene 1082029 1083327 . + . ID=gene-IXO1088_005240;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=IXO1088_005240 CP040687.1 Protein Homology CDS 1082029 1083327 . + 0 ID=cds-QIE14963.1;Parent=gene-IXO1088_005240;Dbxref=NCBI_GP:QIE14963.1;Name=QIE14963.1;gbkey=CDS;gene=folC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409300.1;locus_tag=IXO1088_005240;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=QIE14963.1;transl_table=11 CP040687.1 Genbank gene 1083395 1084477 . + . ID=gene-IXO1088_005245;Name=IXO1088_005245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005245 CP040687.1 Protein Homology CDS 1083395 1084477 . + 0 ID=cds-QIE14964.1;Parent=gene-IXO1088_005245;Dbxref=NCBI_GP:QIE14964.1;Name=QIE14964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301876.1;locus_tag=IXO1088_005245;product=sporulation protein;protein_id=QIE14964.1;transl_table=11 CP040687.1 Genbank gene 1084692 1085438 . + . ID=gene-IXO1088_005250;Name=IXO1088_005250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005250 CP040687.1 Protein Homology CDS 1084692 1085438 . + 0 ID=cds-QIE14965.1;Parent=gene-IXO1088_005250;Dbxref=NCBI_GP:QIE14965.1;Name=QIE14965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636338.1;locus_tag=IXO1088_005250;product=CvpA family protein;protein_id=QIE14965.1;transl_table=11 CP040687.1 Genbank gene 1085469 1086935 . + . ID=gene-IXO1088_005255;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=IXO1088_005255 CP040687.1 Protein Homology CDS 1085469 1086935 . + 0 ID=cds-QIE14966.1;Parent=gene-IXO1088_005255;Dbxref=NCBI_GP:QIE14966.1;Name=QIE14966.1;gbkey=CDS;gene=purF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636339.1;locus_tag=IXO1088_005255;product=amidophosphoribosyltransferase;protein_id=QIE14966.1;transl_table=11 CP040687.1 Genbank gene 1087074 1087898 . + . ID=gene-IXO1088_005260;Name=IXO1088_005260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005260 CP040687.1 Protein Homology CDS 1087074 1087898 . + 0 ID=cds-QIE14967.1;Parent=gene-IXO1088_005260;Dbxref=NCBI_GP:QIE14967.1;Name=QIE14967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115654.1;locus_tag=IXO1088_005260;product=ferritin-like domain-containing protein;protein_id=QIE14967.1;transl_table=11 CP040687.1 Genbank gene 1087933 1088010 . - . ID=gene-IXO1088_005265;Name=IXO1088_005265;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_005265 CP040687.1 cmsearch ncRNA 1087933 1088010 . - . ID=rna-IXO1088_005265;Parent=gene-IXO1088_005265;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_005265;product=sX9 sRNA CP040687.1 cmsearch exon 1087933 1088010 . - . ID=exon-IXO1088_005265-1;Parent=rna-IXO1088_005265;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_005265;product=sX9 sRNA CP040687.1 Genbank pseudogene 1088610 1088735 . + . ID=gene-IXO1088_005270;Name=IXO1088_005270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005270;pseudo=true CP040687.1 Protein Homology CDS 1088610 1088735 . + 0 ID=cds-IXO1088_005270;Parent=gene-IXO1088_005270;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636341.1;locus_tag=IXO1088_005270;product=peptidyl-Asp metalloendopeptidase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1089002 1089421 . + . ID=gene-IXO1088_005275;Name=IXO1088_005275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005275 CP040687.1 Protein Homology CDS 1089002 1089421 . + 0 ID=cds-QIE17871.1;Parent=gene-IXO1088_005275;Dbxref=NCBI_GP:QIE17871.1;Name=QIE17871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368563.1;locus_tag=IXO1088_005275;product=hypothetical protein;protein_id=QIE17871.1;transl_table=11 CP040687.1 Genbank gene 1089601 1090344 . - . ID=gene-IXO1088_005280;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=IXO1088_005280 CP040687.1 Protein Homology CDS 1089601 1090344 . - 0 ID=cds-QIE14968.1;Parent=gene-IXO1088_005280;Dbxref=NCBI_GP:QIE14968.1;Name=QIE14968.1;gbkey=CDS;gene=lpxH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636343.1;locus_tag=IXO1088_005280;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=QIE14968.1;transl_table=11 CP040687.1 Genbank gene 1090992 1091534 . - . ID=gene-IXO1088_005285;Name=IXO1088_005285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005285 CP040687.1 Protein Homology CDS 1090992 1091534 . - 0 ID=cds-QIE14969.1;Parent=gene-IXO1088_005285;Dbxref=NCBI_GP:QIE14969.1;Name=QIE14969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409295.1;locus_tag=IXO1088_005285;product=phosphatase PAP2 family protein;protein_id=QIE14969.1;transl_table=11 CP040687.1 Genbank gene 1091515 1092651 . - . ID=gene-IXO1088_005290;Name=IXO1088_005290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005290 CP040687.1 Protein Homology CDS 1091515 1092651 . - 0 ID=cds-QIE14970.1;Parent=gene-IXO1088_005290;Dbxref=NCBI_GP:QIE14970.1;Name=QIE14970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636345.1;locus_tag=IXO1088_005290;product=glycosyltransferase family 1 protein;protein_id=QIE14970.1;transl_table=11 CP040687.1 Genbank gene 1092856 1094382 . - . ID=gene-IXO1088_005295;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=IXO1088_005295 CP040687.1 Protein Homology CDS 1092856 1094382 . - 0 ID=cds-QIE14971.1;Parent=gene-IXO1088_005295;Dbxref=NCBI_GP:QIE14971.1;Name=QIE14971.1;gbkey=CDS;gene=ppx;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636346.1;locus_tag=IXO1088_005295;product=exopolyphosphatase;protein_id=QIE14971.1;transl_table=11 CP040687.1 Genbank gene 1094554 1096656 . - . ID=gene-IXO1088_005300;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=IXO1088_005300 CP040687.1 Protein Homology CDS 1094554 1096656 . - 0 ID=cds-QIE14972.1;Parent=gene-IXO1088_005300;Dbxref=NCBI_GP:QIE14972.1;Name=QIE14972.1;gbkey=CDS;gene=ppk1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483747.1;locus_tag=IXO1088_005300;product=polyphosphate kinase 1;protein_id=QIE14972.1;transl_table=11 CP040687.1 Genbank gene 1096772 1098115 . - . ID=gene-IXO1088_005305;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=IXO1088_005305 CP040687.1 Protein Homology CDS 1096772 1098115 . - 0 ID=cds-QIE14973.1;Parent=gene-IXO1088_005305;Dbxref=NCBI_GP:QIE14973.1;Name=QIE14973.1;gbkey=CDS;gene=phoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636348.1;locus_tag=IXO1088_005305;product=phosphate regulon sensor histidine kinase PhoR;protein_id=QIE14973.1;transl_table=11 CP040687.1 Genbank gene 1098173 1098862 . - . ID=gene-IXO1088_005310;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=IXO1088_005310 CP040687.1 Protein Homology CDS 1098173 1098862 . - 0 ID=cds-QIE14974.1;Parent=gene-IXO1088_005310;Dbxref=NCBI_GP:QIE14974.1;Name=QIE14974.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636349.1;locus_tag=IXO1088_005310;product=phosphate regulon transcriptional regulatory protein PhoB;protein_id=QIE14974.1;transl_table=11 CP040687.1 Genbank gene 1099043 1100689 . - . ID=gene-IXO1088_005315;Name=IXO1088_005315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005315 CP040687.1 Protein Homology CDS 1099043 1100689 . - 0 ID=cds-QIE14975.1;Parent=gene-IXO1088_005315;Dbxref=NCBI_GP:QIE14975.1;Name=QIE14975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636350.1;locus_tag=IXO1088_005315;product=M48 family metallopeptidase;protein_id=QIE14975.1;transl_table=11 CP040687.1 Genbank gene 1100839 1101147 . + . ID=gene-IXO1088_005320;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=IXO1088_005320 CP040687.1 Protein Homology CDS 1100839 1101147 . + 0 ID=cds-QIE14976.1;Parent=gene-IXO1088_005320;Dbxref=NCBI_GP:QIE14976.1;Name=QIE14976.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927845.1;locus_tag=IXO1088_005320;product=glutaredoxin 3;protein_id=QIE14976.1;transl_table=11 CP040687.1 Genbank gene 1101144 1101539 . + . ID=gene-IXO1088_005325;Name=IXO1088_005325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005325 CP040687.1 Protein Homology CDS 1101144 1101539 . + 0 ID=cds-QIE14977.1;Parent=gene-IXO1088_005325;Dbxref=NCBI_GP:QIE14977.1;Name=QIE14977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483760.1;locus_tag=IXO1088_005325;product=carboxymuconolactone decarboxylase family protein;protein_id=QIE14977.1;transl_table=11 CP040687.1 Genbank gene 1101690 1102443 . + . ID=gene-IXO1088_005330;Name=IXO1088_005330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005330 CP040687.1 Protein Homology CDS 1101690 1101961 . + 0 ID=cds-QIE14978.1;Parent=gene-IXO1088_005330;Dbxref=NCBI_GP:QIE14978.1;Name=QIE14978.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_005330;product=IS5 family transposase;protein_id=QIE14978.1;transl_table=11 CP040687.1 Protein Homology CDS 1101960 1102443 . + 1 ID=cds-QIE14978.1;Parent=gene-IXO1088_005330;Dbxref=NCBI_GP:QIE14978.1;Name=QIE14978.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_005330;product=IS5 family transposase;protein_id=QIE14978.1;transl_table=11 CP040687.1 Genbank gene 1102444 1103409 . - . ID=gene-IXO1088_005335;Name=IXO1088_005335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005335 CP040687.1 Protein Homology CDS 1102444 1103409 . - 0 ID=cds-QIE14979.1;Parent=gene-IXO1088_005335;Dbxref=NCBI_GP:QIE14979.1;Name=QIE14979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_005335;product=IS1595-like element ISXo5 family transposase;protein_id=QIE14979.1;transl_table=11 CP040687.1 Genbank gene 1103673 1104680 . + . ID=gene-IXO1088_005340;Name=IXO1088_005340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005340 CP040687.1 Protein Homology CDS 1103673 1104680 . + 0 ID=cds-QIE14980.1;Parent=gene-IXO1088_005340;Dbxref=NCBI_GP:QIE14980.1;Name=QIE14980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852046.1;locus_tag=IXO1088_005340;product=isocitrate dehydrogenase;protein_id=QIE14980.1;transl_table=11 CP040687.1 Genbank gene 1104824 1105585 . - . ID=gene-IXO1088_005345;Name=IXO1088_005345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005345 CP040687.1 Protein Homology CDS 1104824 1105585 . - 0 ID=cds-QIE14981.1;Parent=gene-IXO1088_005345;Dbxref=NCBI_GP:QIE14981.1;Name=QIE14981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636354.1;locus_tag=IXO1088_005345;product=Bax inhibitor-1/YccA family protein;protein_id=QIE14981.1;transl_table=11 CP040687.1 Genbank gene 1105737 1105813 . + . ID=gene-IXO1088_005350;Name=IXO1088_005350;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_005350 CP040687.1 tRNAscan-SE tRNA 1105737 1105813 . + . ID=rna-IXO1088_005350;Parent=gene-IXO1088_005350;anticodon=(pos:1105771..1105773);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_005350;product=tRNA-Pro CP040687.1 tRNAscan-SE exon 1105737 1105813 . + . ID=exon-IXO1088_005350-1;Parent=rna-IXO1088_005350;anticodon=(pos:1105771..1105773);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_005350;product=tRNA-Pro CP040687.1 Genbank gene 1105856 1105932 . + . ID=gene-IXO1088_005355;Name=IXO1088_005355;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_005355 CP040687.1 tRNAscan-SE tRNA 1105856 1105932 . + . ID=rna-IXO1088_005355;Parent=gene-IXO1088_005355;anticodon=(pos:1105890..1105892);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_005355;product=tRNA-Arg CP040687.1 tRNAscan-SE exon 1105856 1105932 . + . ID=exon-IXO1088_005355-1;Parent=rna-IXO1088_005355;anticodon=(pos:1105890..1105892);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_005355;product=tRNA-Arg CP040687.1 Genbank gene 1105965 1106041 . + . ID=gene-IXO1088_005360;Name=IXO1088_005360;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_005360 CP040687.1 tRNAscan-SE tRNA 1105965 1106041 . + . ID=rna-IXO1088_005360;Parent=gene-IXO1088_005360;anticodon=(pos:1105999..1106001);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_005360;product=tRNA-His CP040687.1 tRNAscan-SE exon 1105965 1106041 . + . ID=exon-IXO1088_005360-1;Parent=rna-IXO1088_005360;anticodon=(pos:1105999..1106001);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_005360;product=tRNA-His CP040687.1 Genbank gene 1106135 1106210 . + . ID=gene-IXO1088_005365;Name=IXO1088_005365;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_005365 CP040687.1 tRNAscan-SE tRNA 1106135 1106210 . + . ID=rna-IXO1088_005365;Parent=gene-IXO1088_005365;anticodon=(pos:1106168..1106170);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_005365;product=tRNA-Lys CP040687.1 tRNAscan-SE exon 1106135 1106210 . + . ID=exon-IXO1088_005365-1;Parent=rna-IXO1088_005365;anticodon=(pos:1106168..1106170);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_005365;product=tRNA-Lys CP040687.1 Genbank pseudogene 1106366 1106488 . - . ID=gene-IXO1088_005370;Name=IXO1088_005370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005370;pseudo=true CP040687.1 Protein Homology CDS 1106366 1106488 . - 0 ID=cds-IXO1088_005370;Parent=gene-IXO1088_005370;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166331.1;locus_tag=IXO1088_005370;product=carboxypeptidase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1106457 1107560 . + . ID=gene-IXO1088_005375;Name=IXO1088_005375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005375;pseudo=true CP040687.1 Protein Homology CDS 1106457 1107560 . + 0 ID=cds-IXO1088_005375;Parent=gene-IXO1088_005375;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558183.1;locus_tag=IXO1088_005375;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1107588 1107913 . + . ID=gene-IXO1088_005380;Name=IXO1088_005380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005380;pseudo=true CP040687.1 Protein Homology CDS 1107588 1107913 . + 0 ID=cds-IXO1088_005380;Parent=gene-IXO1088_005380;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011488762.1;locus_tag=IXO1088_005380;product=AAA family ATPase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1108011 1108292 . + . ID=gene-IXO1088_005385;Name=IXO1088_005385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005385;pseudo=true CP040687.1 Protein Homology CDS 1108011 1108292 . + 0 ID=cds-IXO1088_005385;Parent=gene-IXO1088_005385;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=IXO1088_005385;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1108616 1108700 . + . ID=gene-IXO1088_005390;Name=IXO1088_005390;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_005390 CP040687.1 tRNAscan-SE tRNA 1108616 1108700 . + . ID=rna-IXO1088_005390;Parent=gene-IXO1088_005390;anticodon=(pos:1108650..1108652);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_005390;product=tRNA-Leu CP040687.1 tRNAscan-SE exon 1108616 1108700 . + . ID=exon-IXO1088_005390-1;Parent=rna-IXO1088_005390;anticodon=(pos:1108650..1108652);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_005390;product=tRNA-Leu CP040687.1 Genbank gene 1108903 1110195 . + . ID=gene-IXO1088_005395;Name=IXO1088_005395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005395 CP040687.1 Protein Homology CDS 1108903 1110195 . + 0 ID=cds-QIE17872.1;Parent=gene-IXO1088_005395;Dbxref=NCBI_GP:QIE17872.1;Name=QIE17872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636355.1;locus_tag=IXO1088_005395;product=trigger factor;protein_id=QIE17872.1;transl_table=11 CP040687.1 Genbank gene 1110288 1110914 . + . ID=gene-IXO1088_005400;Name=IXO1088_005400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005400 CP040687.1 Protein Homology CDS 1110288 1110914 . + 0 ID=cds-QIE14982.1;Parent=gene-IXO1088_005400;Dbxref=NCBI_GP:QIE14982.1;Name=QIE14982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636356.1;locus_tag=IXO1088_005400;product=ATP-dependent Clp protease proteolytic subunit;protein_id=QIE14982.1;transl_table=11 CP040687.1 Genbank gene 1111039 1112325 . + . ID=gene-IXO1088_005405;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=IXO1088_005405 CP040687.1 Protein Homology CDS 1111039 1112325 . + 0 ID=cds-QIE14983.1;Parent=gene-IXO1088_005405;Dbxref=NCBI_GP:QIE14983.1;Name=QIE14983.1;gbkey=CDS;gene=clpX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636357.1;locus_tag=IXO1088_005405;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=QIE14983.1;transl_table=11 CP040687.1 Genbank gene 1112469 1114940 . + . ID=gene-IXO1088_005410;Name=IXO1088_005410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005410 CP040687.1 Protein Homology CDS 1112469 1114940 . + 0 ID=cds-QIE14984.1;Parent=gene-IXO1088_005410;Dbxref=NCBI_GP:QIE14984.1;Name=QIE14984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636358.1;locus_tag=IXO1088_005410;product=endopeptidase La;protein_id=QIE14984.1;transl_table=11 CP040687.1 Genbank gene 1115154 1115426 . + . ID=gene-IXO1088_005415;Name=IXO1088_005415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005415 CP040687.1 Protein Homology CDS 1115154 1115426 . + 0 ID=cds-QIE14985.1;Parent=gene-IXO1088_005415;Dbxref=NCBI_GP:QIE14985.1;Name=QIE14985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636359.1;locus_tag=IXO1088_005415;product=HU family DNA-binding protein;protein_id=QIE14985.1;transl_table=11 CP040687.1 Genbank gene 1115438 1115512 . + . ID=gene-IXO1088_005420;Name=IXO1088_005420;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_005420 CP040687.1 tRNAscan-SE tRNA 1115438 1115512 . + . ID=rna-IXO1088_005420;Parent=gene-IXO1088_005420;anticodon=(pos:1115470..1115472);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_005420;product=tRNA-Val CP040687.1 tRNAscan-SE exon 1115438 1115512 . + . ID=exon-IXO1088_005420-1;Parent=rna-IXO1088_005420;anticodon=(pos:1115470..1115472);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_005420;product=tRNA-Val CP040687.1 Genbank gene 1115541 1115617 . + . ID=gene-IXO1088_005425;Name=IXO1088_005425;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_005425 CP040687.1 tRNAscan-SE tRNA 1115541 1115617 . + . ID=rna-IXO1088_005425;Parent=gene-IXO1088_005425;anticodon=(pos:1115575..1115577);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_005425;product=tRNA-Asp CP040687.1 tRNAscan-SE exon 1115541 1115617 . + . ID=exon-IXO1088_005425-1;Parent=rna-IXO1088_005425;anticodon=(pos:1115575..1115577);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_005425;product=tRNA-Asp CP040687.1 Genbank gene 1115712 1115788 . + . ID=gene-IXO1088_005430;Name=IXO1088_005430;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_005430 CP040687.1 tRNAscan-SE tRNA 1115712 1115788 . + . ID=rna-IXO1088_005430;Parent=gene-IXO1088_005430;anticodon=(pos:1115746..1115748);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_005430;product=tRNA-Asp CP040687.1 tRNAscan-SE exon 1115712 1115788 . + . ID=exon-IXO1088_005430-1;Parent=rna-IXO1088_005430;anticodon=(pos:1115746..1115748);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_005430;product=tRNA-Asp CP040687.1 Genbank gene 1116258 1118228 . + . ID=gene-IXO1088_005435;Name=IXO1088_005435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005435 CP040687.1 Protein Homology CDS 1116258 1118228 . + 0 ID=cds-QIE14986.1;Parent=gene-IXO1088_005435;Dbxref=NCBI_GP:QIE14986.1;Name=QIE14986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636360.1;locus_tag=IXO1088_005435;product=peptidylprolyl isomerase;protein_id=QIE14986.1;transl_table=11 CP040687.1 Genbank gene 1118941 1120119 . - . ID=gene-IXO1088_005440;Name=IXO1088_005440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005440 CP040687.1 Protein Homology CDS 1118941 1120119 . - 0 ID=cds-QIE14987.1;Parent=gene-IXO1088_005440;Dbxref=NCBI_GP:QIE14987.1;Name=QIE14987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112895.1;locus_tag=IXO1088_005440;product=LysM peptidoglycan-binding domain-containing protein;protein_id=QIE14987.1;transl_table=11 CP040687.1 Genbank gene 1120116 1120883 . - . ID=gene-IXO1088_005445;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=IXO1088_005445 CP040687.1 Protein Homology CDS 1120116 1120883 . - 0 ID=cds-QIE14988.1;Parent=gene-IXO1088_005445;Dbxref=NCBI_GP:QIE14988.1;Name=QIE14988.1;gbkey=CDS;gene=gloB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257886.1;locus_tag=IXO1088_005445;product=hydroxyacylglutathione hydrolase;protein_id=QIE14988.1;transl_table=11 CP040687.1 Genbank gene 1120896 1121552 . + . ID=gene-IXO1088_005450;Name=IXO1088_005450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005450 CP040687.1 Protein Homology CDS 1120896 1121552 . + 0 ID=cds-QIE14989.1;Parent=gene-IXO1088_005450;Dbxref=NCBI_GP:QIE14989.1;Name=QIE14989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636364.1;locus_tag=IXO1088_005450;product=hypothetical protein;protein_id=QIE14989.1;transl_table=11 CP040687.1 Genbank gene 1121580 1122032 . + . ID=gene-IXO1088_005455;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=IXO1088_005455 CP040687.1 Protein Homology CDS 1121580 1122032 . + 0 ID=cds-QIE14990.1;Parent=gene-IXO1088_005455;Dbxref=NCBI_GP:QIE14990.1;Name=QIE14990.1;gbkey=CDS;gene=rnhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636365.1;locus_tag=IXO1088_005455;product=ribonuclease HI;protein_id=QIE14990.1;transl_table=11 CP040687.1 Genbank gene 1122041 1122775 . + . ID=gene-IXO1088_005460;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=IXO1088_005460 CP040687.1 Protein Homology CDS 1122041 1122775 . + 0 ID=cds-QIE14991.1;Parent=gene-IXO1088_005460;Dbxref=NCBI_GP:QIE14991.1;Name=QIE14991.1;gbkey=CDS;gene=dnaQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158127.1;locus_tag=IXO1088_005460;product=DNA polymerase III subunit epsilon;protein_id=QIE14991.1;transl_table=11 CP040687.1 Genbank gene 1122835 1122906 . + . ID=gene-IXO1088_005465;Name=IXO1088_005465;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_005465 CP040687.1 cmsearch ncRNA 1122835 1122906 . + . ID=rna-IXO1088_005465;Parent=gene-IXO1088_005465;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_005465;product=sX9 sRNA CP040687.1 cmsearch exon 1122835 1122906 . + . ID=exon-IXO1088_005465-1;Parent=rna-IXO1088_005465;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_005465;product=sX9 sRNA CP040687.1 Genbank gene 1123211 1123915 . - . ID=gene-IXO1088_005470;Name=IXO1088_005470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005470 CP040687.1 Protein Homology CDS 1123211 1123915 . - 0 ID=cds-QIE14992.1;Parent=gene-IXO1088_005470;Dbxref=NCBI_GP:QIE14992.1;Name=QIE14992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636367.1;locus_tag=IXO1088_005470;product=serine/threonine-protein phosphatase;protein_id=QIE14992.1;transl_table=11 CP040687.1 Genbank gene 1124112 1124202 . + . ID=gene-IXO1088_005475;Name=IXO1088_005475;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_005475 CP040687.1 tRNAscan-SE tRNA 1124112 1124202 . + . ID=rna-IXO1088_005475;Parent=gene-IXO1088_005475;anticodon=(pos:1124146..1124148);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_005475;product=tRNA-Ser CP040687.1 tRNAscan-SE exon 1124112 1124202 . + . ID=exon-IXO1088_005475-1;Parent=rna-IXO1088_005475;anticodon=(pos:1124146..1124148);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_005475;product=tRNA-Ser CP040687.1 Genbank gene 1124742 1125371 . - . ID=gene-IXO1088_005480;Name=IXO1088_005480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005480 CP040687.1 GeneMarkS-2+ CDS 1124742 1125371 . - 0 ID=cds-QIE14993.1;Parent=gene-IXO1088_005480;Dbxref=NCBI_GP:QIE14993.1;Name=QIE14993.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_005480;product=hypothetical protein;protein_id=QIE14993.1;transl_table=11 CP040687.1 Genbank pseudogene 1125866 1126165 . + . ID=gene-IXO1088_005485;Name=IXO1088_005485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005485;pseudo=true CP040687.1 Protein Homology CDS 1125866 1126165 . + 0 ID=cds-IXO1088_005485;Parent=gene-IXO1088_005485;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303606.1;locus_tag=IXO1088_005485;product=DNA adenine methylase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1126264 1126464 . + . ID=gene-IXO1088_005490;Name=IXO1088_005490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005490 CP040687.1 Protein Homology CDS 1126264 1126464 . + 0 ID=cds-QIE14994.1;Parent=gene-IXO1088_005490;Dbxref=NCBI_GP:QIE14994.1;Name=QIE14994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301197.1;locus_tag=IXO1088_005490;product=hypothetical protein;protein_id=QIE14994.1;transl_table=11 CP040687.1 Genbank gene 1126860 1129583 . + . ID=gene-IXO1088_005495;Name=tssI;gbkey=Gene;gene=tssI;gene_biotype=protein_coding;locus_tag=IXO1088_005495 CP040687.1 Protein Homology CDS 1126860 1129583 . + 0 ID=cds-QIE14995.1;Parent=gene-IXO1088_005495;Dbxref=NCBI_GP:QIE14995.1;Name=QIE14995.1;gbkey=CDS;gene=tssI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257894.1;locus_tag=IXO1088_005495;product=type VI secretion system tip protein VgrG;protein_id=QIE14995.1;transl_table=11 CP040687.1 Genbank gene 1129651 1131801 . + . ID=gene-IXO1088_005500;Name=IXO1088_005500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005500 CP040687.1 Protein Homology CDS 1129651 1131801 . + 0 ID=cds-QIE14996.1;Parent=gene-IXO1088_005500;Dbxref=NCBI_GP:QIE14996.1;Name=QIE14996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407734.1;locus_tag=IXO1088_005500;product=DUF3274 domain-containing protein;protein_id=QIE14996.1;transl_table=11 CP040687.1 Genbank gene 1131798 1133495 . + . ID=gene-IXO1088_005505;Name=IXO1088_005505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005505 CP040687.1 Protein Homology CDS 1131798 1133495 . + 0 ID=cds-QIE14997.1;Parent=gene-IXO1088_005505;Dbxref=NCBI_GP:QIE14997.1;Name=QIE14997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257197.1;locus_tag=IXO1088_005505;product=DUF2875 domain-containing protein;protein_id=QIE14997.1;transl_table=11 CP040687.1 Genbank pseudogene 1133492 1133753 . + . ID=gene-IXO1088_005510;Name=IXO1088_005510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005510;pseudo=true CP040687.1 Protein Homology CDS 1133492 1133753 . + 0 ID=cds-IXO1088_005510;Parent=gene-IXO1088_005510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303179.1;locus_tag=IXO1088_005510;product=PAAR domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1133815 1134372 . + . ID=gene-IXO1088_005515;Name=IXO1088_005515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005515 CP040687.1 Protein Homology CDS 1133815 1134372 . + 0 ID=cds-QIE14998.1;Parent=gene-IXO1088_005515;Dbxref=NCBI_GP:QIE14998.1;Name=QIE14998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445918.1;locus_tag=IXO1088_005515;product=hypothetical protein;protein_id=QIE14998.1;transl_table=11 CP040687.1 Genbank gene 1134455 1135420 . + . ID=gene-IXO1088_005520;Name=IXO1088_005520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005520 CP040687.1 Protein Homology CDS 1134455 1135420 . + 0 ID=cds-QIE14999.1;Parent=gene-IXO1088_005520;Dbxref=NCBI_GP:QIE14999.1;Name=QIE14999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_005520;product=IS1595 family transposase;protein_id=QIE14999.1;transl_table=11 CP040687.1 Genbank gene 1135519 1136205 . - . ID=gene-IXO1088_005525;Name=IXO1088_005525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005525 CP040687.1 Protein Homology CDS 1135519 1136205 . - 0 ID=cds-QIE17873.1;Parent=gene-IXO1088_005525;Dbxref=NCBI_GP:QIE17873.1;Name=QIE17873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407739.1;locus_tag=IXO1088_005525;product=site-specific integrase;protein_id=QIE17873.1;transl_table=11 CP040687.1 Genbank gene 1136316 1136720 . + . ID=gene-IXO1088_005530;Name=IXO1088_005530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005530 CP040687.1 Protein Homology CDS 1136316 1136720 . + 0 ID=cds-QIE15000.1;Parent=gene-IXO1088_005530;Dbxref=NCBI_GP:QIE15000.1;Name=QIE15000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636368.1;locus_tag=IXO1088_005530;product=hypothetical protein;protein_id=QIE15000.1;transl_table=11 CP040687.1 Genbank gene 1136931 1137980 . - . ID=gene-IXO1088_005535;Name=IXO1088_005535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005535 CP040687.1 Protein Homology CDS 1136931 1137980 . - 0 ID=cds-QIE15001.1;Parent=gene-IXO1088_005535;Dbxref=NCBI_GP:QIE15001.1;Name=QIE15001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050699.1;locus_tag=IXO1088_005535;product=glycosyltransferase family 9 protein;protein_id=QIE15001.1;transl_table=11 CP040687.1 Genbank gene 1138001 1138750 . + . ID=gene-IXO1088_005540;Name=IXO1088_005540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005540 CP040687.1 Protein Homology CDS 1138001 1138750 . + 0 ID=cds-QIE15002.1;Parent=gene-IXO1088_005540;Dbxref=NCBI_GP:QIE15002.1;Name=QIE15002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636370.1;locus_tag=IXO1088_005540;product=3-deoxy-D-manno-octulosonic acid kinase;protein_id=QIE15002.1;transl_table=11 CP040687.1 Genbank gene 1138750 1139499 . + . ID=gene-IXO1088_005545;Name=IXO1088_005545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005545 CP040687.1 Protein Homology CDS 1138750 1139499 . + 0 ID=cds-QIE15003.1;Parent=gene-IXO1088_005545;Dbxref=NCBI_GP:QIE15003.1;Name=QIE15003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158132.1;locus_tag=IXO1088_005545;product=MBL fold metallo-hydrolase;protein_id=QIE15003.1;transl_table=11 CP040687.1 Genbank gene 1139499 1140530 . + . ID=gene-IXO1088_005550;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=IXO1088_005550 CP040687.1 Protein Homology CDS 1139499 1140530 . + 0 ID=cds-QIE15004.1;Parent=gene-IXO1088_005550;Dbxref=NCBI_GP:QIE15004.1;Name=QIE15004.1;gbkey=CDS;gene=moaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814367.1;locus_tag=IXO1088_005550;product=GTP 3'%2C8-cyclase MoaA;protein_id=QIE15004.1;transl_table=11 CP040687.1 Genbank gene 1140548 1140907 . + . ID=gene-IXO1088_005555;Name=IXO1088_005555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005555 CP040687.1 Protein Homology CDS 1140548 1140907 . + 0 ID=cds-QIE15005.1;Parent=gene-IXO1088_005555;Dbxref=NCBI_GP:QIE15005.1;Name=QIE15005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257907.1;locus_tag=IXO1088_005555;product=nuclear transport factor 2 family protein;protein_id=QIE15005.1;transl_table=11 CP040687.1 Genbank gene 1140932 1141429 . + . ID=gene-IXO1088_005560;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=IXO1088_005560 CP040687.1 Protein Homology CDS 1140932 1141429 . + 0 ID=cds-QIE15006.1;Parent=gene-IXO1088_005560;Dbxref=NCBI_GP:QIE15006.1;Name=QIE15006.1;gbkey=CDS;gene=moaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636374.1;locus_tag=IXO1088_005560;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=QIE15006.1;transl_table=11 CP040687.1 Genbank gene 1141426 1141671 . + . ID=gene-IXO1088_005565;Name=IXO1088_005565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005565 CP040687.1 Protein Homology CDS 1141426 1141671 . + 0 ID=cds-QIE15007.1;Parent=gene-IXO1088_005565;Dbxref=NCBI_GP:QIE15007.1;Name=QIE15007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636375.1;locus_tag=IXO1088_005565;product=MoaD/ThiS family protein;protein_id=QIE15007.1;transl_table=11 CP040687.1 Genbank gene 1141668 1142114 . + . ID=gene-IXO1088_005570;Name=IXO1088_005570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005570 CP040687.1 Protein Homology CDS 1141668 1142114 . + 0 ID=cds-QIE15008.1;Parent=gene-IXO1088_005570;Dbxref=NCBI_GP:QIE15008.1;Name=QIE15008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158137.1;locus_tag=IXO1088_005570;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=QIE15008.1;transl_table=11 CP040687.1 Genbank gene 1142276 1142372 . - . ID=gene-IXO1088_005575;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=IXO1088_005575 CP040687.1 cmsearch SRP_RNA 1142276 1142372 . - . ID=rna-IXO1088_005575;Parent=gene-IXO1088_005575;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_005575;product=signal recognition particle sRNA small type CP040687.1 cmsearch exon 1142276 1142372 . - . ID=exon-IXO1088_005575-1;Parent=rna-IXO1088_005575;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_005575;product=signal recognition particle sRNA small type CP040687.1 Genbank gene 1142448 1142540 . - . ID=gene-IXO1088_005580;Name=IXO1088_005580;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_005580 CP040687.1 tRNAscan-SE tRNA 1142448 1142540 . - . ID=rna-IXO1088_005580;Parent=gene-IXO1088_005580;anticodon=(pos:complement(1142504..1142506));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_005580;product=tRNA-Ser CP040687.1 tRNAscan-SE exon 1142448 1142540 . - . ID=exon-IXO1088_005580-1;Parent=rna-IXO1088_005580;anticodon=(pos:complement(1142504..1142506));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_005580;product=tRNA-Ser CP040687.1 Genbank gene 1142676 1144772 . + . ID=gene-IXO1088_005585;Name=IXO1088_005585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005585 CP040687.1 Protein Homology CDS 1142676 1144772 . + 0 ID=cds-QIE15009.1;Parent=gene-IXO1088_005585;Dbxref=NCBI_GP:QIE15009.1;Name=QIE15009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155800.1;locus_tag=IXO1088_005585;product=DNA polymerase III subunit gamma/tau;protein_id=QIE15009.1;transl_table=11 CP040687.1 Genbank gene 1144779 1145099 . + . ID=gene-IXO1088_005590;Name=IXO1088_005590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005590 CP040687.1 Protein Homology CDS 1144779 1145099 . + 0 ID=cds-QIE15010.1;Parent=gene-IXO1088_005590;Dbxref=NCBI_GP:QIE15010.1;Name=QIE15010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346622.1;locus_tag=IXO1088_005590;product=YbaB/EbfC family nucleoid-associated protein;protein_id=QIE15010.1;transl_table=11 CP040687.1 Genbank gene 1145197 1145790 . + . ID=gene-IXO1088_005595;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=IXO1088_005595 CP040687.1 Protein Homology CDS 1145197 1145790 . + 0 ID=cds-QIE15011.1;Parent=gene-IXO1088_005595;Dbxref=NCBI_GP:QIE15011.1;Name=QIE15011.1;gbkey=CDS;gene=recR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636379.1;locus_tag=IXO1088_005595;product=recombination protein RecR;protein_id=QIE15011.1;transl_table=11 CP040687.1 Genbank gene 1145892 1146242 . + . ID=gene-IXO1088_005600;Name=IXO1088_005600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005600 CP040687.1 Protein Homology CDS 1145892 1146242 . + 0 ID=cds-QIE15012.1;Parent=gene-IXO1088_005600;Dbxref=NCBI_GP:QIE15012.1;Name=QIE15012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636380.1;locus_tag=IXO1088_005600;product=histidine triad nucleotide-binding protein;protein_id=QIE15012.1;transl_table=11 CP040687.1 Genbank gene 1146362 1146895 . - . ID=gene-IXO1088_005605;Name=IXO1088_005605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005605 CP040687.1 Protein Homology CDS 1146362 1146895 . - 0 ID=cds-QIE15013.1;Parent=gene-IXO1088_005605;Dbxref=NCBI_GP:QIE15013.1;Name=QIE15013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636381.1;locus_tag=IXO1088_005605;product=Slp/YeaY family lipoprotein;protein_id=QIE15013.1;transl_table=11 CP040687.1 Genbank gene 1146892 1148844 . - . ID=gene-IXO1088_005610;Name=IXO1088_005610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005610 CP040687.1 Protein Homology CDS 1146892 1148844 . - 0 ID=cds-QIE15014.1;Parent=gene-IXO1088_005610;Dbxref=NCBI_GP:QIE15014.1;Name=QIE15014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636382.1;locus_tag=IXO1088_005610;product=DUF3488 domain-containing protein;protein_id=QIE15014.1;transl_table=11 CP040687.1 Genbank gene 1148837 1149793 . - . ID=gene-IXO1088_005615;Name=IXO1088_005615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005615 CP040687.1 Protein Homology CDS 1148837 1149793 . - 0 ID=cds-QIE15015.1;Parent=gene-IXO1088_005615;Dbxref=NCBI_GP:QIE15015.1;Name=QIE15015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636383.1;locus_tag=IXO1088_005615;product=DUF58 domain-containing protein;protein_id=QIE15015.1;transl_table=11 CP040687.1 Genbank gene 1149799 1150752 . - . ID=gene-IXO1088_005620;Name=IXO1088_005620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005620 CP040687.1 Protein Homology CDS 1149799 1150752 . - 0 ID=cds-QIE15016.1;Parent=gene-IXO1088_005620;Dbxref=NCBI_GP:QIE15016.1;Name=QIE15016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636384.1;locus_tag=IXO1088_005620;product=MoxR family ATPase;protein_id=QIE15016.1;transl_table=11 CP040687.1 Genbank gene 1150791 1152659 . + . ID=gene-IXO1088_005625;Name=IXO1088_005625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005625 CP040687.1 Protein Homology CDS 1150791 1152659 . + 0 ID=cds-QIE15017.1;Parent=gene-IXO1088_005625;Dbxref=NCBI_GP:QIE15017.1;Name=QIE15017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303142.1;locus_tag=IXO1088_005625;product=glycosyltransferase family 39 protein;protein_id=QIE15017.1;transl_table=11 CP040687.1 Genbank pseudogene 1152810 1153412 . + . ID=gene-IXO1088_005630;Name=IXO1088_005630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005630;pseudo=true CP040687.1 Protein Homology CDS 1152810 1153412 . + 0 ID=cds-IXO1088_005630;Parent=gene-IXO1088_005630;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118007.1;locus_tag=IXO1088_005630;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1153431 1153853 . + . ID=gene-IXO1088_005635;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=IXO1088_005635 CP040687.1 Protein Homology CDS 1153431 1153853 . + 0 ID=cds-QIE17874.1;Parent=gene-IXO1088_005635;Dbxref=NCBI_GP:QIE17874.1;Name=QIE17874.1;gbkey=CDS;gene=arsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504567.1;locus_tag=IXO1088_005635;product=arsenate reductase (glutaredoxin);protein_id=QIE17874.1;transl_table=11 CP040687.1 Genbank gene 1154175 1154690 . + . ID=gene-IXO1088_005640;Name=IXO1088_005640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005640 CP040687.1 Protein Homology CDS 1154175 1154690 . + 0 ID=cds-QIE15018.1;Parent=gene-IXO1088_005640;Dbxref=NCBI_GP:QIE15018.1;Name=QIE15018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636079.1;locus_tag=IXO1088_005640;product=peptide deformylase;protein_id=QIE15018.1;transl_table=11 CP040687.1 Genbank gene 1154789 1154865 . + . ID=gene-IXO1088_005645;Name=IXO1088_005645;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_005645 CP040687.1 cmsearch ncRNA 1154789 1154865 . + . ID=rna-IXO1088_005645;Parent=gene-IXO1088_005645;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_005645;product=sX9 sRNA CP040687.1 cmsearch exon 1154789 1154865 . + . ID=exon-IXO1088_005645-1;Parent=rna-IXO1088_005645;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_005645;product=sX9 sRNA CP040687.1 Genbank pseudogene 1155207 1156020 . + . ID=gene-IXO1088_005650;Name=IXO1088_005650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005650;pseudo=true CP040687.1 Protein Homology CDS 1155207 1156020 . + 0 ID=cds-IXO1088_005650;Parent=gene-IXO1088_005650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171825.1;locus_tag=IXO1088_005650;product=cellulase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1156117 1156237 . + . ID=gene-IXO1088_005655;Name=IXO1088_005655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005655;pseudo=true CP040687.1 Protein Homology CDS 1156117 1156237 . + 0 ID=cds-IXO1088_005655;Parent=gene-IXO1088_005655;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112261.1;locus_tag=IXO1088_005655;product=cellulase S;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1156438 1157184 . + . ID=gene-IXO1088_005660;Name=IXO1088_005660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005660 CP040687.1 Protein Homology CDS 1156438 1157184 . + 0 ID=cds-QIE17875.1;Parent=gene-IXO1088_005660;Dbxref=NCBI_GP:QIE17875.1;Name=QIE17875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365555.1;locus_tag=IXO1088_005660;product=cellulase;protein_id=QIE17875.1;transl_table=11 CP040687.1 Genbank gene 1157578 1157654 . - . ID=gene-IXO1088_005665;Name=IXO1088_005665;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_005665 CP040687.1 cmsearch ncRNA 1157578 1157654 . - . ID=rna-IXO1088_005665;Parent=gene-IXO1088_005665;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_005665;product=sX9 sRNA CP040687.1 cmsearch exon 1157578 1157654 . - . ID=exon-IXO1088_005665-1;Parent=rna-IXO1088_005665;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_005665;product=sX9 sRNA CP040687.1 Genbank gene 1157801 1159402 . - . ID=gene-IXO1088_005670;Name=IXO1088_005670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005670 CP040687.1 Protein Homology CDS 1157801 1159402 . - 0 ID=cds-QIE15019.1;Parent=gene-IXO1088_005670;Dbxref=NCBI_GP:QIE15019.1;Name=QIE15019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850148.1;locus_tag=IXO1088_005670;product=rhamnogalacturonase B;protein_id=QIE15019.1;transl_table=11 CP040687.1 Genbank pseudogene 1159763 1160089 . - . ID=gene-IXO1088_005675;Name=IXO1088_005675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005675;pseudo=true CP040687.1 Protein Homology CDS 1159763 1160089 . - 0 ID=cds-IXO1088_005675;Parent=gene-IXO1088_005675;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091038.1;locus_tag=IXO1088_005675;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1160391 1161626 . + . ID=gene-IXO1088_005680;Name=IXO1088_005680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005680 CP040687.1 Protein Homology CDS 1160391 1161626 . + 0 ID=cds-QIE15020.1;Parent=gene-IXO1088_005680;Dbxref=NCBI_GP:QIE15020.1;Name=QIE15020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1088_005680;product=ISL3-like element ISXoo13 family transposase;protein_id=QIE15020.1;transl_table=11 CP040687.1 Genbank pseudogene 1161661 1162176 . + . ID=gene-IXO1088_005685;Name=IXO1088_005685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005685;pseudo=true CP040687.1 Protein Homology CDS 1161661 1162176 . + 0 ID=cds-IXO1088_005685;Parent=gene-IXO1088_005685;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_005685;product=IS5-like element ISXo3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1162495 1163421 . - . ID=gene-IXO1088_005690;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=IXO1088_005690 CP040687.1 Protein Homology CDS 1162495 1163421 . - 0 ID=cds-QIE15021.1;Parent=gene-IXO1088_005690;Dbxref=NCBI_GP:QIE15021.1;Name=QIE15021.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638714.2;locus_tag=IXO1088_005690;product=Grx4 family monothiol glutaredoxin;protein_id=QIE15021.1;transl_table=11 CP040687.1 Genbank gene 1163482 1164264 . + . ID=gene-IXO1088_005695;Name=IXO1088_005695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005695 CP040687.1 Protein Homology CDS 1163482 1164264 . + 0 ID=cds-QIE15022.1;Parent=gene-IXO1088_005695;Dbxref=NCBI_GP:QIE15022.1;Name=QIE15022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638713.1;locus_tag=IXO1088_005695;product=polysaccharide deacetylase family protein;protein_id=QIE15022.1;transl_table=11 CP040687.1 Genbank gene 1164269 1164345 . - . ID=gene-IXO1088_005700;Name=IXO1088_005700;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_005700 CP040687.1 cmsearch ncRNA 1164269 1164345 . - . ID=rna-IXO1088_005700;Parent=gene-IXO1088_005700;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_005700;product=sX9 sRNA CP040687.1 cmsearch exon 1164269 1164345 . - . ID=exon-IXO1088_005700-1;Parent=rna-IXO1088_005700;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_005700;product=sX9 sRNA CP040687.1 Genbank gene 1164566 1165237 . - . ID=gene-IXO1088_005705;Name=IXO1088_005705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005705 CP040687.1 Protein Homology CDS 1164566 1165237 . - 0 ID=cds-QIE17876.1;Parent=gene-IXO1088_005705;Dbxref=NCBI_GP:QIE17876.1;Name=QIE17876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638712.1;locus_tag=IXO1088_005705;product=methyltransferase;protein_id=QIE17876.1;transl_table=11 CP040687.1 Genbank gene 1165560 1166198 . - . ID=gene-IXO1088_005710;Name=IXO1088_005710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005710 CP040687.1 Protein Homology CDS 1165560 1166198 . - 0 ID=cds-QIE15023.1;Parent=gene-IXO1088_005710;Dbxref=NCBI_GP:QIE15023.1;Name=QIE15023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171955.1;locus_tag=IXO1088_005710;product=SGNH/GDSL hydrolase family protein;protein_id=QIE15023.1;transl_table=11 CP040687.1 Genbank gene 1166198 1167469 . - . ID=gene-IXO1088_005715;Name=IXO1088_005715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005715 CP040687.1 Protein Homology CDS 1166198 1167469 . - 0 ID=cds-QIE15024.1;Parent=gene-IXO1088_005715;Dbxref=NCBI_GP:QIE15024.1;Name=QIE15024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638710.1;locus_tag=IXO1088_005715;product=pyridoxal phosphate-dependent aminotransferase;protein_id=QIE15024.1;transl_table=11 CP040687.1 Genbank gene 1167623 1168714 . + . ID=gene-IXO1088_005720;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=IXO1088_005720 CP040687.1 Protein Homology CDS 1167623 1168714 . + 0 ID=cds-QIE15025.1;Parent=gene-IXO1088_005720;Dbxref=NCBI_GP:QIE15025.1;Name=QIE15025.1;gbkey=CDS;gene=rsgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638708.1;locus_tag=IXO1088_005720;product=ribosome small subunit-dependent GTPase A;protein_id=QIE15025.1;transl_table=11 CP040687.1 Genbank gene 1168714 1169976 . + . ID=gene-IXO1088_005725;Name=IXO1088_005725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005725 CP040687.1 Protein Homology CDS 1168714 1169976 . + 0 ID=cds-QIE15026.1;Parent=gene-IXO1088_005725;Dbxref=NCBI_GP:QIE15026.1;Name=QIE15026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638707.1;locus_tag=IXO1088_005725;product=flavohemoglobin expression-modulating QEGLA motif protein;protein_id=QIE15026.1;transl_table=11 CP040687.1 Genbank gene 1170129 1170809 . + . ID=gene-IXO1088_005730;Name=IXO1088_005730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005730 CP040687.1 Protein Homology CDS 1170129 1170809 . + 0 ID=cds-QIE17877.1;Parent=gene-IXO1088_005730;Dbxref=NCBI_GP:QIE17877.1;Name=QIE17877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638706.1;locus_tag=IXO1088_005730;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=QIE17877.1;transl_table=11 CP040687.1 Genbank gene 1170976 1172892 . - . ID=gene-IXO1088_005735;Name=IXO1088_005735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005735 CP040687.1 Protein Homology CDS 1170976 1172892 . - 0 ID=cds-QIE15027.1;Parent=gene-IXO1088_005735;Dbxref=NCBI_GP:QIE15027.1;Name=QIE15027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365510.1;locus_tag=IXO1088_005735;product=amylosucrase;protein_id=QIE15027.1;transl_table=11 CP040687.1 Genbank gene 1172927 1175371 . - . ID=gene-IXO1088_005740;Name=IXO1088_005740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005740 CP040687.1 Protein Homology CDS 1172927 1175371 . - 0 ID=cds-QIE15028.1;Parent=gene-IXO1088_005740;Dbxref=NCBI_GP:QIE15028.1;Name=QIE15028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174521.1;locus_tag=IXO1088_005740;product=TonB-dependent receptor;protein_id=QIE15028.1;transl_table=11 CP040687.1 Genbank gene 1175641 1176972 . + . ID=gene-IXO1088_005745;Name=IXO1088_005745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005745 CP040687.1 Protein Homology CDS 1175641 1176972 . + 0 ID=cds-QIE15029.1;Parent=gene-IXO1088_005745;Dbxref=NCBI_GP:QIE15029.1;Name=QIE15029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407764.1;locus_tag=IXO1088_005745;product=SLC45 family MFS transporter;protein_id=QIE15029.1;transl_table=11 CP040687.1 Genbank gene 1177020 1177084 . + . ID=gene-IXO1088_005750;Name=IXO1088_005750;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_005750 CP040687.1 cmsearch ncRNA 1177020 1177084 . + . ID=rna-IXO1088_005750;Parent=gene-IXO1088_005750;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_005750;product=sX9 sRNA CP040687.1 cmsearch exon 1177020 1177084 . + . ID=exon-IXO1088_005750-1;Parent=rna-IXO1088_005750;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_005750;product=sX9 sRNA CP040687.1 Genbank gene 1177255 1178286 . - . ID=gene-IXO1088_005755;Name=IXO1088_005755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005755 CP040687.1 Protein Homology CDS 1177255 1178286 . - 0 ID=cds-QIE15030.1;Parent=gene-IXO1088_005755;Dbxref=NCBI_GP:QIE15030.1;Name=QIE15030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638702.1;locus_tag=IXO1088_005755;product=LacI family transcriptional regulator;protein_id=QIE15030.1;transl_table=11 CP040687.1 Genbank gene 1178527 1179267 . - . ID=gene-IXO1088_005760;Name=phbB;gbkey=Gene;gene=phbB;gene_biotype=protein_coding;locus_tag=IXO1088_005760 CP040687.1 Protein Homology CDS 1178527 1179267 . - 0 ID=cds-QIE15031.1;Parent=gene-IXO1088_005760;Dbxref=NCBI_GP:QIE15031.1;Name=QIE15031.1;gbkey=CDS;gene=phbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638701.1;locus_tag=IXO1088_005760;product=acetoacetyl-CoA reductase;protein_id=QIE15031.1;transl_table=11 CP040687.1 Genbank gene 1179379 1180707 . - . ID=gene-IXO1088_005765;Name=IXO1088_005765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005765 CP040687.1 Protein Homology CDS 1179379 1180707 . - 0 ID=cds-QIE15032.1;Parent=gene-IXO1088_005765;Dbxref=NCBI_GP:QIE15032.1;Name=QIE15032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638700.1;locus_tag=IXO1088_005765;product=TRAP transporter large permease subunit;protein_id=QIE15032.1;transl_table=11 CP040687.1 Genbank pseudogene 1180701 1180935 . - . ID=gene-IXO1088_005770;Name=IXO1088_005770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005770;pseudo=true CP040687.1 Protein Homology CDS 1180701 1180935 . - 0 ID=cds-IXO1088_005770;Parent=gene-IXO1088_005770;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483416.1;locus_tag=IXO1088_005770;product=magnesium transporter;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1180935 1182128 . - . ID=gene-IXO1088_005775;Name=IXO1088_005775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005775 CP040687.1 Protein Homology CDS 1180935 1182128 . - 0 ID=cds-QIE15033.1;Parent=gene-IXO1088_005775;Dbxref=NCBI_GP:QIE15033.1;Name=QIE15033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638699.1;locus_tag=IXO1088_005775;product=porin;protein_id=QIE15033.1;transl_table=11 CP040687.1 Genbank gene 1182384 1183085 . + . ID=gene-IXO1088_005780;Name=IXO1088_005780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005780 CP040687.1 Protein Homology CDS 1182384 1183085 . + 0 ID=cds-QIE15034.1;Parent=gene-IXO1088_005780;Dbxref=NCBI_GP:QIE15034.1;Name=QIE15034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163399.1;locus_tag=IXO1088_005780;product=response regulator;protein_id=QIE15034.1;transl_table=11 CP040687.1 Genbank gene 1183078 1184463 . + . ID=gene-IXO1088_005785;Name=IXO1088_005785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005785 CP040687.1 Protein Homology CDS 1183078 1184463 . + 0 ID=cds-QIE15035.1;Parent=gene-IXO1088_005785;Dbxref=NCBI_GP:QIE15035.1;Name=QIE15035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005932775.1;locus_tag=IXO1088_005785;product=HAMP domain-containing protein;protein_id=QIE15035.1;transl_table=11 CP040687.1 Genbank gene 1184463 1185512 . + . ID=gene-IXO1088_005790;Name=IXO1088_005790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005790 CP040687.1 Protein Homology CDS 1184463 1185512 . + 0 ID=cds-QIE17878.1;Parent=gene-IXO1088_005790;Dbxref=NCBI_GP:QIE17878.1;Name=QIE17878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638696.2;locus_tag=IXO1088_005790;product=ABC transporter substrate-binding protein;protein_id=QIE17878.1;transl_table=11 CP040687.1 Genbank gene 1185552 1186190 . + . ID=gene-IXO1088_005795;Name=IXO1088_005795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005795 CP040687.1 Protein Homology CDS 1185552 1186190 . + 0 ID=cds-QIE15036.1;Parent=gene-IXO1088_005795;Dbxref=NCBI_GP:QIE15036.1;Name=QIE15036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638695.1;locus_tag=IXO1088_005795;product=response regulator transcription factor;protein_id=QIE15036.1;transl_table=11 CP040687.1 Genbank gene 1186391 1187245 . - . ID=gene-IXO1088_005800;Name=IXO1088_005800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005800 CP040687.1 Protein Homology CDS 1186391 1187245 . - 0 ID=cds-QIE15037.1;Parent=gene-IXO1088_005800;Dbxref=NCBI_GP:QIE15037.1;Name=QIE15037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257951.1;locus_tag=IXO1088_005800;product=nuclear transport factor 2 family protein;protein_id=QIE15037.1;transl_table=11 CP040687.1 Genbank gene 1187242 1187889 . - . ID=gene-IXO1088_005805;Name=IXO1088_005805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005805 CP040687.1 Protein Homology CDS 1187242 1187889 . - 0 ID=cds-QIE17879.1;Parent=gene-IXO1088_005805;Dbxref=NCBI_GP:QIE17879.1;Name=QIE17879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407771.1;locus_tag=IXO1088_005805;product=aldo/keto reductase;protein_id=QIE17879.1;transl_table=11 CP040687.1 Genbank pseudogene 1187986 1188176 . + . ID=gene-IXO1088_005810;Name=IXO1088_005810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005810;pseudo=true CP040687.1 Protein Homology CDS 1187986 1188176 . + 0 ID=cds-IXO1088_005810;Parent=gene-IXO1088_005810;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483397.1;locus_tag=IXO1088_005810;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1188189 1189091 . + . ID=gene-IXO1088_005815;Name=IXO1088_005815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005815 CP040687.1 Protein Homology CDS 1188189 1189091 . + 0 ID=cds-QIE15038.1;Parent=gene-IXO1088_005815;Dbxref=NCBI_GP:QIE15038.1;Name=QIE15038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159489.1;locus_tag=IXO1088_005815;product=LysR family transcriptional regulator;protein_id=QIE15038.1;transl_table=11 CP040687.1 Genbank gene 1189083 1189862 . - . ID=gene-IXO1088_005820;Name=IXO1088_005820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005820 CP040687.1 Protein Homology CDS 1189083 1189862 . - 0 ID=cds-QIE15039.1;Parent=gene-IXO1088_005820;Dbxref=NCBI_GP:QIE15039.1;Name=QIE15039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376702.1;locus_tag=IXO1088_005820;product=ABC transporter substrate-binding protein;protein_id=QIE15039.1;transl_table=11 CP040687.1 Genbank gene 1189859 1191208 . - . ID=gene-IXO1088_005825;Name=IXO1088_005825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005825 CP040687.1 Protein Homology CDS 1189859 1191208 . - 0 ID=cds-QIE15040.1;Parent=gene-IXO1088_005825;Dbxref=NCBI_GP:QIE15040.1;Name=QIE15040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157488.1;locus_tag=IXO1088_005825;product=MFS transporter;protein_id=QIE15040.1;transl_table=11 CP040687.1 Genbank gene 1191524 1194169 . - . ID=gene-IXO1088_005830;Name=IXO1088_005830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005830 CP040687.1 Protein Homology CDS 1191524 1194169 . - 0 ID=cds-QIE15041.1;Parent=gene-IXO1088_005830;Dbxref=NCBI_GP:QIE15041.1;Name=QIE15041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638694.1;locus_tag=IXO1088_005830;product=response regulator;protein_id=QIE15041.1;transl_table=11 CP040687.1 Genbank gene 1194277 1194352 . + . ID=gene-IXO1088_005835;Name=IXO1088_005835;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_005835 CP040687.1 cmsearch ncRNA 1194277 1194352 . + . ID=rna-IXO1088_005835;Parent=gene-IXO1088_005835;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_005835;product=sX9 sRNA CP040687.1 cmsearch exon 1194277 1194352 . + . ID=exon-IXO1088_005835-1;Parent=rna-IXO1088_005835;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_005835;product=sX9 sRNA CP040687.1 Genbank gene 1194491 1195663 . - . ID=gene-IXO1088_005840;Name=IXO1088_005840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005840 CP040687.1 Protein Homology CDS 1194491 1195663 . - 0 ID=cds-QIE15042.1;Parent=gene-IXO1088_005840;Dbxref=NCBI_GP:QIE15042.1;Name=QIE15042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638693.1;locus_tag=IXO1088_005840;product=porin;protein_id=QIE15042.1;transl_table=11 CP040687.1 Genbank gene 1195954 1197327 . + . ID=gene-IXO1088_005845;Name=IXO1088_005845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005845 CP040687.1 Protein Homology CDS 1195954 1197327 . + 0 ID=cds-QIE15043.1;Parent=gene-IXO1088_005845;Dbxref=NCBI_GP:QIE15043.1;Name=QIE15043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638692.1;locus_tag=IXO1088_005845;product=dicarboxylate/amino acid:cation symporter;protein_id=QIE15043.1;transl_table=11 CP040687.1 Genbank gene 1197525 1199834 . + . ID=gene-IXO1088_005850;Name=IXO1088_005850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005850 CP040687.1 Protein Homology CDS 1197525 1199834 . + 0 ID=cds-QIE15044.1;Parent=gene-IXO1088_005850;Dbxref=NCBI_GP:QIE15044.1;Name=QIE15044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157485.1;locus_tag=IXO1088_005850;product=NADP-dependent malic enzyme;protein_id=QIE15044.1;transl_table=11 CP040687.1 Genbank gene 1200010 1200174 . - . ID=gene-IXO1088_005855;Name=IXO1088_005855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005855 CP040687.1 Protein Homology CDS 1200010 1200174 . - 0 ID=cds-QIE15045.1;Parent=gene-IXO1088_005855;Dbxref=NCBI_GP:QIE15045.1;Name=QIE15045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304944.1;locus_tag=IXO1088_005855;product=alpha-mannosidase;protein_id=QIE15045.1;transl_table=11 CP040687.1 Genbank pseudogene 1200265 1201481 . - . ID=gene-IXO1088_005860;Name=IXO1088_005860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005860;pseudo=true CP040687.1 Protein Homology CDS 1200265 1201481 . - 0 ID=cds-IXO1088_005860;Parent=gene-IXO1088_005860;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1088_005860;product=ISL3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1201606 1201821 . - . ID=gene-IXO1088_005865;Name=IXO1088_005865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005865;pseudo=true CP040687.1 Protein Homology CDS 1201606 1201821 . - 0 ID=cds-IXO1088_005865;Parent=gene-IXO1088_005865;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1088_005865;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1201840 1203315 . - . ID=gene-IXO1088_005870;Name=IXO1088_005870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005870 CP040687.1 Protein Homology CDS 1201840 1203315 . - 0 ID=cds-QIE15046.1;Parent=gene-IXO1088_005870;Dbxref=NCBI_GP:QIE15046.1;Name=QIE15046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1088_005870;product=IS5-like element ISXoo5 family transposase;protein_id=QIE15046.1;transl_table=11 CP040687.1 Genbank pseudogene 1203518 1204573 . - . ID=gene-IXO1088_005875;Name=IXO1088_005875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005875;pseudo=true CP040687.1 Protein Homology CDS 1203518 1204573 . - 0 ID=cds-IXO1088_005875;Parent=gene-IXO1088_005875;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301700.1;locus_tag=IXO1088_005875;product=tape measure protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1204788 1205306 . - . ID=gene-IXO1088_005880;Name=IXO1088_005880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005880 CP040687.1 GeneMarkS-2+ CDS 1204788 1205306 . - 0 ID=cds-QIE15047.1;Parent=gene-IXO1088_005880;Dbxref=NCBI_GP:QIE15047.1;Name=QIE15047.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_005880;product=hypothetical protein;protein_id=QIE15047.1;transl_table=11 CP040687.1 Genbank gene 1205321 1206388 . - . ID=gene-IXO1088_005885;Name=IXO1088_005885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005885 CP040687.1 GeneMarkS-2+ CDS 1205321 1206388 . - 0 ID=cds-QIE15048.1;Parent=gene-IXO1088_005885;Dbxref=NCBI_GP:QIE15048.1;Name=QIE15048.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_005885;product=hypothetical protein;protein_id=QIE15048.1;transl_table=11 CP040687.1 Genbank gene 1206391 1207284 . - . ID=gene-IXO1088_005890;Name=IXO1088_005890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005890 CP040687.1 GeneMarkS-2+ CDS 1206391 1207284 . - 0 ID=cds-QIE15049.1;Parent=gene-IXO1088_005890;Dbxref=NCBI_GP:QIE15049.1;Name=QIE15049.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_005890;product=radical SAM protein;protein_id=QIE15049.1;transl_table=11 CP040687.1 Genbank pseudogene 1207502 1207696 . - . ID=gene-IXO1088_005895;Name=IXO1088_005895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005895;pseudo=true CP040687.1 Protein Homology CDS 1207502 1207696 . - 0 ID=cds-IXO1088_005895;Parent=gene-IXO1088_005895;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300773.1;locus_tag=IXO1088_005895;product=site-specific integrase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1208022 1209399 . + . ID=gene-IXO1088_005900;Name=IXO1088_005900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005900;pseudo=true CP040687.1 Protein Homology CDS 1208022 1209399 . + 0 ID=cds-IXO1088_005900;Parent=gene-IXO1088_005900;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=IXO1088_005900;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1209433 1210664 . - . ID=gene-IXO1088_005905;Name=IXO1088_005905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005905;pseudo=true CP040687.1 Protein Homology CDS 1209433 1210664 . - 0 ID=cds-IXO1088_005905;Parent=gene-IXO1088_005905;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611570.1;locus_tag=IXO1088_005905;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1210667 1210915 . - . ID=gene-IXO1088_005910;Name=IXO1088_005910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005910;pseudo=true CP040687.1 Protein Homology CDS 1210667 1210915 . - 0 ID=cds-IXO1088_005910;Parent=gene-IXO1088_005910;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611322.1;locus_tag=IXO1088_005910;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1211006 1211629 . - . ID=gene-IXO1088_005915;Name=IXO1088_005915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005915 CP040687.1 Protein Homology CDS 1211006 1211629 . - 0 ID=cds-QIE15050.1;Parent=gene-IXO1088_005915;Dbxref=NCBI_GP:QIE15050.1;Name=QIE15050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112972.1;locus_tag=IXO1088_005915;product=thiamine phosphate synthase;protein_id=QIE15050.1;transl_table=11 CP040687.1 Genbank gene 1211653 1211892 . + . ID=gene-IXO1088_005920;Name=IXO1088_005920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005920 CP040687.1 Protein Homology CDS 1211653 1211892 . + 0 ID=cds-QIE15051.1;Parent=gene-IXO1088_005920;Dbxref=NCBI_GP:QIE15051.1;Name=QIE15051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112973.1;locus_tag=IXO1088_005920;product=rubredoxin;protein_id=QIE15051.1;transl_table=11 CP040687.1 Genbank gene 1211942 1212823 . - . ID=gene-IXO1088_005925;Name=IXO1088_005925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005925 CP040687.1 Protein Homology CDS 1211942 1212823 . - 0 ID=cds-QIE15052.1;Parent=gene-IXO1088_005925;Dbxref=NCBI_GP:QIE15052.1;Name=QIE15052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638613.1;locus_tag=IXO1088_005925;product=tetratricopeptide repeat protein;protein_id=QIE15052.1;transl_table=11 CP040687.1 Genbank gene 1212973 1213422 . - . ID=gene-IXO1088_005930;Name=IXO1088_005930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005930 CP040687.1 Protein Homology CDS 1212973 1213422 . - 0 ID=cds-QIE15053.1;Parent=gene-IXO1088_005930;Dbxref=NCBI_GP:QIE15053.1;Name=QIE15053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967674.1;locus_tag=IXO1088_005930;product=DUF192 domain-containing protein;protein_id=QIE15053.1;transl_table=11 CP040687.1 Genbank gene 1213573 1214220 . - . ID=gene-IXO1088_005935;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=IXO1088_005935 CP040687.1 Protein Homology CDS 1213573 1214220 . - 0 ID=cds-QIE15054.1;Parent=gene-IXO1088_005935;Dbxref=NCBI_GP:QIE15054.1;Name=QIE15054.1;gbkey=CDS;gene=rpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638611.1;locus_tag=IXO1088_005935;product=ribose-5-phosphate isomerase RpiA;protein_id=QIE15054.1;transl_table=11 CP040687.1 Genbank gene 1214312 1214782 . - . ID=gene-IXO1088_005940;Name=IXO1088_005940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005940 CP040687.1 Protein Homology CDS 1214312 1214782 . - 0 ID=cds-QIE15055.1;Parent=gene-IXO1088_005940;Dbxref=NCBI_GP:QIE15055.1;Name=QIE15055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812469.1;locus_tag=IXO1088_005940;product=EVE domain-containing protein;protein_id=QIE15055.1;transl_table=11 CP040687.1 Genbank gene 1214779 1215369 . - . ID=gene-IXO1088_005945;Name=IXO1088_005945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005945 CP040687.1 Protein Homology CDS 1214779 1215369 . - 0 ID=cds-QIE15056.1;Parent=gene-IXO1088_005945;Dbxref=NCBI_GP:QIE15056.1;Name=QIE15056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090970.1;locus_tag=IXO1088_005945;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=QIE15056.1;transl_table=11 CP040687.1 Genbank gene 1215699 1215882 . - . ID=gene-IXO1088_005950;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=IXO1088_005950 CP040687.1 cmsearch ncRNA 1215699 1215882 . - . ID=rna-IXO1088_005950;Parent=gene-IXO1088_005950;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_005950;product=6S RNA CP040687.1 cmsearch exon 1215699 1215882 . - . ID=exon-IXO1088_005950-1;Parent=rna-IXO1088_005950;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_005950;product=6S RNA CP040687.1 Genbank gene 1215978 1216277 . - . ID=gene-IXO1088_005955;Name=IXO1088_005955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005955 CP040687.1 Protein Homology CDS 1215978 1216277 . - 0 ID=cds-QIE15057.1;Parent=gene-IXO1088_005955;Dbxref=NCBI_GP:QIE15057.1;Name=QIE15057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300828.1;locus_tag=IXO1088_005955;product=cell division protein ZapA;protein_id=QIE15057.1;transl_table=11 CP040687.1 Genbank gene 1216274 1216495 . - . ID=gene-IXO1088_005960;Name=IXO1088_005960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005960 CP040687.1 Protein Homology CDS 1216274 1216495 . - 0 ID=cds-QIE17880.1;Parent=gene-IXO1088_005960;Dbxref=NCBI_GP:QIE17880.1;Name=QIE17880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638607.1;locus_tag=IXO1088_005960;product=TIGR02449 family protein;protein_id=QIE17880.1;transl_table=11 CP040687.1 Genbank gene 1216731 1217273 . + . ID=gene-IXO1088_005965;Name=IXO1088_005965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005965 CP040687.1 Protein Homology CDS 1216731 1217273 . + 0 ID=cds-QIE15058.1;Parent=gene-IXO1088_005965;Dbxref=NCBI_GP:QIE15058.1;Name=QIE15058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638606.1;locus_tag=IXO1088_005965;product=YecA family protein;protein_id=QIE15058.1;transl_table=11 CP040687.1 Genbank gene 1217284 1218624 . + . ID=gene-IXO1088_005970;Name=IXO1088_005970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005970 CP040687.1 Protein Homology CDS 1217284 1218624 . + 0 ID=cds-QIE15059.1;Parent=gene-IXO1088_005970;Dbxref=NCBI_GP:QIE15059.1;Name=QIE15059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364488.1;locus_tag=IXO1088_005970;product=M24 family metallopeptidase;protein_id=QIE15059.1;transl_table=11 CP040687.1 Genbank pseudogene 1218809 1219210 . - . ID=gene-IXO1088_005975;Name=IXO1088_005975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_005975;pseudo=true CP040687.1 Protein Homology CDS 1218809 1219210 . - 0 ID=cds-IXO1088_005975;Parent=gene-IXO1088_005975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508836.1;locus_tag=IXO1088_005975;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1219377 1219453 . + . ID=gene-IXO1088_005980;Name=IXO1088_005980;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_005980 CP040687.1 cmsearch ncRNA 1219377 1219453 . + . ID=rna-IXO1088_005980;Parent=gene-IXO1088_005980;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_005980;product=sX9 sRNA CP040687.1 cmsearch exon 1219377 1219453 . + . ID=exon-IXO1088_005980-1;Parent=rna-IXO1088_005980;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_005980;product=sX9 sRNA CP040687.1 Genbank gene 1219512 1220837 . - . ID=gene-IXO1088_005985;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=IXO1088_005985 CP040687.1 Protein Homology CDS 1219512 1220837 . - 0 ID=cds-QIE15060.1;Parent=gene-IXO1088_005985;Dbxref=NCBI_GP:QIE15060.1;Name=QIE15060.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005926900.1;locus_tag=IXO1088_005985;product=Xaa-Pro dipeptidase;protein_id=QIE15060.1;transl_table=11 CP040687.1 Genbank gene 1221036 1221383 . - . ID=gene-IXO1088_005990;Name=IXO1088_005990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005990 CP040687.1 Protein Homology CDS 1221036 1221383 . - 0 ID=cds-QIE15061.1;Parent=gene-IXO1088_005990;Dbxref=NCBI_GP:QIE15061.1;Name=QIE15061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156859.1;locus_tag=IXO1088_005990;product=PilZ domain-containing protein;protein_id=QIE15061.1;transl_table=11 CP040687.1 Genbank gene 1221380 1223788 . - . ID=gene-IXO1088_005995;Name=IXO1088_005995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_005995 CP040687.1 Protein Homology CDS 1221380 1223788 . - 0 ID=cds-QIE15062.1;Parent=gene-IXO1088_005995;Dbxref=NCBI_GP:QIE15062.1;Name=QIE15062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407789.1;locus_tag=IXO1088_005995;product=DUF1631 domain-containing protein;protein_id=QIE15062.1;transl_table=11 CP040687.1 Genbank gene 1223967 1225124 . - . ID=gene-IXO1088_006000;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=IXO1088_006000 CP040687.1 Protein Homology CDS 1223967 1225124 . - 0 ID=cds-QIE15063.1;Parent=gene-IXO1088_006000;Dbxref=NCBI_GP:QIE15063.1;Name=QIE15063.1;gbkey=CDS;gene=hemW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504451.1;locus_tag=IXO1088_006000;product=radical SAM family heme chaperone HemW;protein_id=QIE15063.1;transl_table=11 CP040687.1 Genbank gene 1225140 1225763 . - . ID=gene-IXO1088_006005;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=IXO1088_006005 CP040687.1 Protein Homology CDS 1225140 1225763 . - 0 ID=cds-QIE15064.1;Parent=gene-IXO1088_006005;Dbxref=NCBI_GP:QIE15064.1;Name=QIE15064.1;gbkey=CDS;gene=rdgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638599.1;locus_tag=IXO1088_006005;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;protein_id=QIE15064.1;transl_table=11 CP040687.1 Genbank gene 1225736 1226131 . - . ID=gene-IXO1088_006010;Name=IXO1088_006010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006010 CP040687.1 Protein Homology CDS 1225736 1226131 . - 0 ID=cds-QIE15065.1;Parent=gene-IXO1088_006010;Dbxref=NCBI_GP:QIE15065.1;Name=QIE15065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638598.1;locus_tag=IXO1088_006010;product=glyoxalase;protein_id=QIE15065.1;transl_table=11 CP040687.1 Genbank gene 1226128 1226853 . - . ID=gene-IXO1088_006015;Name=IXO1088_006015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006015 CP040687.1 Protein Homology CDS 1226128 1226853 . - 0 ID=cds-QIE15066.1;Parent=gene-IXO1088_006015;Dbxref=NCBI_GP:QIE15066.1;Name=QIE15066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638597.1;locus_tag=IXO1088_006015;product=ribonuclease PH;protein_id=QIE15066.1;transl_table=11 CP040687.1 Genbank gene 1226963 1227823 . + . ID=gene-IXO1088_006020;Name=IXO1088_006020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006020 CP040687.1 Protein Homology CDS 1226963 1227823 . + 0 ID=cds-QIE15067.1;Parent=gene-IXO1088_006020;Dbxref=NCBI_GP:QIE15067.1;Name=QIE15067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638596.1;locus_tag=IXO1088_006020;product=YicC family protein;protein_id=QIE15067.1;transl_table=11 CP040687.1 Genbank gene 1227940 1228551 . + . ID=gene-IXO1088_006025;Name=IXO1088_006025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006025 CP040687.1 Protein Homology CDS 1227940 1228551 . + 0 ID=cds-QIE15068.1;Parent=gene-IXO1088_006025;Dbxref=NCBI_GP:QIE15068.1;Name=QIE15068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638595.1;locus_tag=IXO1088_006025;product=guanylate kinase;protein_id=QIE15068.1;transl_table=11 CP040687.1 Genbank gene 1228609 1228684 . + . ID=gene-IXO1088_006030;Name=IXO1088_006030;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_006030 CP040687.1 cmsearch ncRNA 1228609 1228684 . + . ID=rna-IXO1088_006030;Parent=gene-IXO1088_006030;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_006030;product=sX9 sRNA CP040687.1 cmsearch exon 1228609 1228684 . + . ID=exon-IXO1088_006030-1;Parent=rna-IXO1088_006030;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_006030;product=sX9 sRNA CP040687.1 Genbank gene 1228732 1229530 . + . ID=gene-IXO1088_006035;Name=IXO1088_006035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006035 CP040687.1 Protein Homology CDS 1228732 1229003 . + 0 ID=cds-QIE15069.1;Parent=gene-IXO1088_006035;Dbxref=NCBI_GP:QIE15069.1;Name=QIE15069.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_006035;product=IS5 family transposase;protein_id=QIE15069.1;transl_table=11 CP040687.1 Protein Homology CDS 1229002 1229530 . + 1 ID=cds-QIE15069.1;Parent=gene-IXO1088_006035;Dbxref=NCBI_GP:QIE15069.1;Name=QIE15069.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_006035;product=IS5 family transposase;protein_id=QIE15069.1;transl_table=11 CP040687.1 Genbank gene 1229678 1229977 . + . ID=gene-IXO1088_006040;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=IXO1088_006040 CP040687.1 Protein Homology CDS 1229678 1229977 . + 0 ID=cds-QIE15070.1;Parent=gene-IXO1088_006040;Dbxref=NCBI_GP:QIE15070.1;Name=QIE15070.1;gbkey=CDS;gene=rpoZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812428.1;locus_tag=IXO1088_006040;product=DNA-directed RNA polymerase subunit omega;protein_id=QIE15070.1;transl_table=11 CP040687.1 Genbank gene 1230106 1232277 . + . ID=gene-IXO1088_006045;Name=IXO1088_006045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006045 CP040687.1 Protein Homology CDS 1230106 1232277 . + 0 ID=cds-QIE15071.1;Parent=gene-IXO1088_006045;Dbxref=NCBI_GP:QIE15071.1;Name=QIE15071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638593.1;locus_tag=IXO1088_006045;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=QIE15071.1;transl_table=11 CP040687.1 Genbank gene 1232357 1232737 . + . ID=gene-IXO1088_006050;Name=IXO1088_006050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006050 CP040687.1 Protein Homology CDS 1232357 1232737 . + 0 ID=cds-QIE15072.1;Parent=gene-IXO1088_006050;Dbxref=NCBI_GP:QIE15072.1;Name=QIE15072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638585.1;locus_tag=IXO1088_006050;product=RidA family protein;protein_id=QIE15072.1;transl_table=11 CP040687.1 Genbank gene 1232758 1234911 . + . ID=gene-IXO1088_006055;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=IXO1088_006055 CP040687.1 Protein Homology CDS 1232758 1234911 . + 0 ID=cds-QIE15073.1;Parent=gene-IXO1088_006055;Dbxref=NCBI_GP:QIE15073.1;Name=QIE15073.1;gbkey=CDS;gene=recG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638584.1;locus_tag=IXO1088_006055;product=ATP-dependent DNA helicase RecG;protein_id=QIE15073.1;transl_table=11 CP040687.1 Genbank gene 1235037 1235975 . + . ID=gene-IXO1088_006060;Name=IXO1088_006060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006060 CP040687.1 Protein Homology CDS 1235037 1235975 . + 0 ID=cds-QIE15074.1;Parent=gene-IXO1088_006060;Dbxref=NCBI_GP:QIE15074.1;Name=QIE15074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169423.1;locus_tag=IXO1088_006060;product=nucleoside hydrolase;protein_id=QIE15074.1;transl_table=11 CP040687.1 Genbank gene 1236047 1236289 . + . ID=gene-IXO1088_006065;Name=IXO1088_006065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006065 CP040687.1 Protein Homology CDS 1236047 1236289 . + 0 ID=cds-QIE15075.1;Parent=gene-IXO1088_006065;Dbxref=NCBI_GP:QIE15075.1;Name=QIE15075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638582.1;locus_tag=IXO1088_006065;product=type B 50S ribosomal protein L31;protein_id=QIE15075.1;transl_table=11 CP040687.1 Genbank gene 1236503 1237792 . + . ID=gene-IXO1088_006070;Name=IXO1088_006070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006070 CP040687.1 Protein Homology CDS 1236503 1237792 . + 0 ID=cds-QIE15076.1;Parent=gene-IXO1088_006070;Dbxref=NCBI_GP:QIE15076.1;Name=QIE15076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638581.1;locus_tag=IXO1088_006070;product=citrate synthase;protein_id=QIE15076.1;transl_table=11 CP040687.1 Genbank gene 1238167 1238817 . - . ID=gene-IXO1088_006075;Name=IXO1088_006075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006075 CP040687.1 Protein Homology CDS 1238167 1238817 . - 0 ID=cds-QIE15077.1;Parent=gene-IXO1088_006075;Dbxref=NCBI_GP:QIE15077.1;Name=QIE15077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407794.1;locus_tag=IXO1088_006075;product=hypothetical protein;protein_id=QIE15077.1;transl_table=11 CP040687.1 Genbank gene 1239127 1241649 . - . ID=gene-IXO1088_006080;Name=IXO1088_006080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006080 CP040687.1 Protein Homology CDS 1239127 1241649 . - 0 ID=cds-QIE15078.1;Parent=gene-IXO1088_006080;Dbxref=NCBI_GP:QIE15078.1;Name=QIE15078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638579.1;locus_tag=IXO1088_006080;product=penicillin-binding protein 1A;protein_id=QIE15078.1;transl_table=11 CP040687.1 Genbank gene 1241772 1242830 . + . ID=gene-IXO1088_006085;Name=IXO1088_006085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006085 CP040687.1 Protein Homology CDS 1241772 1242830 . + 0 ID=cds-QIE15079.1;Parent=gene-IXO1088_006085;Dbxref=NCBI_GP:QIE15079.1;Name=QIE15079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812410.1;locus_tag=IXO1088_006085;product=pilus assembly protein PilM;protein_id=QIE15079.1;transl_table=11 CP040687.1 Genbank gene 1242830 1243588 . + . ID=gene-IXO1088_006090;Name=IXO1088_006090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006090 CP040687.1 Protein Homology CDS 1242830 1243588 . + 0 ID=cds-QIE15080.1;Parent=gene-IXO1088_006090;Dbxref=NCBI_GP:QIE15080.1;Name=QIE15080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638577.1;locus_tag=IXO1088_006090;product=PilN domain-containing protein;protein_id=QIE15080.1;transl_table=11 CP040687.1 Genbank gene 1243585 1244250 . + . ID=gene-IXO1088_006095;Name=IXO1088_006095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006095 CP040687.1 Protein Homology CDS 1243585 1244250 . + 0 ID=cds-QIE15081.1;Parent=gene-IXO1088_006095;Dbxref=NCBI_GP:QIE15081.1;Name=QIE15081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638576.1;locus_tag=IXO1088_006095;product=fimbrial protein;protein_id=QIE15081.1;transl_table=11 CP040687.1 Genbank gene 1244247 1244780 . + . ID=gene-IXO1088_006100;Name=IXO1088_006100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006100 CP040687.1 Protein Homology CDS 1244247 1244780 . + 0 ID=cds-QIE15082.1;Parent=gene-IXO1088_006100;Dbxref=NCBI_GP:QIE15082.1;Name=QIE15082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638575.1;locus_tag=IXO1088_006100;product=pilus assembly protein PilP;protein_id=QIE15082.1;transl_table=11 CP040687.1 Genbank gene 1244800 1246749 . + . ID=gene-IXO1088_006105;Name=IXO1088_006105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006105 CP040687.1 Protein Homology CDS 1244800 1246749 . + 0 ID=cds-QIE15083.1;Parent=gene-IXO1088_006105;Dbxref=NCBI_GP:QIE15083.1;Name=QIE15083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638574.1;locus_tag=IXO1088_006105;product=type IV pilus secretin PilQ family protein;protein_id=QIE15083.1;transl_table=11 CP040687.1 Genbank gene 1246895 1247929 . - . ID=gene-IXO1088_006110;Name=IXO1088_006110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006110 CP040687.1 Protein Homology CDS 1246895 1247929 . - 0 ID=cds-QIE15084.1;Parent=gene-IXO1088_006110;Dbxref=NCBI_GP:QIE15084.1;Name=QIE15084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407799.1;locus_tag=IXO1088_006110;product=IS630 family transposase;protein_id=QIE15084.1;transl_table=11 CP040687.1 Genbank pseudogene 1247955 1248230 . - . ID=gene-IXO1088_006115;Name=IXO1088_006115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_006115;pseudo=true CP040687.1 Protein Homology CDS 1247955 1248230 . - 0 ID=cds-IXO1088_006115;Parent=gene-IXO1088_006115;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_006115;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1248552 1249571 . + . ID=gene-IXO1088_006120;Name=IXO1088_006120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006120 CP040687.1 Protein Homology CDS 1248552 1249571 . + 0 ID=cds-QIE15085.1;Parent=gene-IXO1088_006120;Dbxref=NCBI_GP:QIE15085.1;Name=QIE15085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638573.1;locus_tag=IXO1088_006120;product=MoxR family ATPase;protein_id=QIE15085.1;transl_table=11 CP040687.1 Genbank gene 1249592 1250554 . + . ID=gene-IXO1088_006125;Name=IXO1088_006125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006125 CP040687.1 Protein Homology CDS 1249592 1250554 . + 0 ID=cds-QIE15086.1;Parent=gene-IXO1088_006125;Dbxref=NCBI_GP:QIE15086.1;Name=QIE15086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161784.1;locus_tag=IXO1088_006125;product=DUF58 domain-containing protein;protein_id=QIE15086.1;transl_table=11 CP040687.1 Genbank gene 1250557 1251018 . + . ID=gene-IXO1088_006130;Name=IXO1088_006130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006130 CP040687.1 Protein Homology CDS 1250557 1251018 . + 0 ID=cds-QIE15087.1;Parent=gene-IXO1088_006130;Dbxref=NCBI_GP:QIE15087.1;Name=QIE15087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486191.1;locus_tag=IXO1088_006130;product=DUF4381 domain-containing protein;protein_id=QIE15087.1;transl_table=11 CP040687.1 Genbank gene 1251015 1252022 . + . ID=gene-IXO1088_006135;Name=IXO1088_006135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006135 CP040687.1 Protein Homology CDS 1251015 1252022 . + 0 ID=cds-QIE15088.1;Parent=gene-IXO1088_006135;Dbxref=NCBI_GP:QIE15088.1;Name=QIE15088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638570.1;locus_tag=IXO1088_006135;product=VWA domain-containing protein;protein_id=QIE15088.1;transl_table=11 CP040687.1 Genbank gene 1252019 1253836 . + . ID=gene-IXO1088_006140;Name=IXO1088_006140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006140 CP040687.1 Protein Homology CDS 1252019 1253836 . + 0 ID=cds-QIE15089.1;Parent=gene-IXO1088_006140;Dbxref=NCBI_GP:QIE15089.1;Name=QIE15089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575858.1;locus_tag=IXO1088_006140;product=VWA domain-containing protein;protein_id=QIE15089.1;transl_table=11 CP040687.1 Genbank gene 1253833 1255590 . + . ID=gene-IXO1088_006145;Name=IXO1088_006145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006145 CP040687.1 Protein Homology CDS 1253833 1255590 . + 0 ID=cds-QIE15090.1;Parent=gene-IXO1088_006145;Dbxref=NCBI_GP:QIE15090.1;Name=QIE15090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407804.1;locus_tag=IXO1088_006145;product=protein BatD;protein_id=QIE15090.1;transl_table=11 CP040687.1 Genbank gene 1255642 1255718 . + . ID=gene-IXO1088_006150;Name=IXO1088_006150;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_006150 CP040687.1 cmsearch ncRNA 1255642 1255718 . + . ID=rna-IXO1088_006150;Parent=gene-IXO1088_006150;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_006150;product=sX9 sRNA CP040687.1 cmsearch exon 1255642 1255718 . + . ID=exon-IXO1088_006150-1;Parent=rna-IXO1088_006150;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_006150;product=sX9 sRNA CP040687.1 Genbank gene 1255886 1256203 . + . ID=gene-IXO1088_006155;Name=IXO1088_006155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006155 CP040687.1 Protein Homology CDS 1255886 1256203 . + 0 ID=cds-QIE15091.1;Parent=gene-IXO1088_006155;Dbxref=NCBI_GP:QIE15091.1;Name=QIE15091.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12395.6;locus_tag=IXO1088_006155;product=hypothetical protein;protein_id=QIE15091.1;transl_table=11 CP040687.1 Genbank gene 1256401 1257681 . + . ID=gene-IXO1088_006160;Name=IXO1088_006160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006160 CP040687.1 Protein Homology CDS 1256401 1257681 . + 0 ID=cds-QIE15092.1;Parent=gene-IXO1088_006160;Dbxref=NCBI_GP:QIE15092.1;Name=QIE15092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850146.1;locus_tag=IXO1088_006160;product=dicarboxylate/amino acid:cation symporter;protein_id=QIE15092.1;transl_table=11 CP040687.1 Genbank gene 1257908 1259908 . + . ID=gene-IXO1088_006165;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=IXO1088_006165 CP040687.1 Protein Homology CDS 1257908 1259908 . + 0 ID=cds-QIE15093.1;Parent=gene-IXO1088_006165;Dbxref=NCBI_GP:QIE15093.1;Name=QIE15093.1;gbkey=CDS;gene=tkt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638566.1;locus_tag=IXO1088_006165;product=transketolase;protein_id=QIE15093.1;transl_table=11 CP040687.1 Genbank pseudogene 1260120 1260491 . + . ID=gene-IXO1088_006170;Name=IXO1088_006170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_006170;pseudo=true CP040687.1 Protein Homology CDS 1260120 1260491 . + 0 ID=cds-IXO1088_006170;Parent=gene-IXO1088_006170;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364571.1;locus_tag=IXO1088_006170;product=outer membrane receptor protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1260727 1261443 . - . ID=gene-IXO1088_006175;Name=IXO1088_006175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006175 CP040687.1 Protein Homology CDS 1260727 1261443 . - 0 ID=cds-QIE15094.1;Parent=gene-IXO1088_006175;Dbxref=NCBI_GP:QIE15094.1;Name=QIE15094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156889.1;locus_tag=IXO1088_006175;product=M23 family metallopeptidase;protein_id=QIE15094.1;transl_table=11 CP040687.1 Genbank gene 1261446 1262438 . - . ID=gene-IXO1088_006180;Name=IXO1088_006180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006180 CP040687.1 Protein Homology CDS 1261446 1262438 . - 0 ID=cds-QIE17881.1;Parent=gene-IXO1088_006180;Dbxref=NCBI_GP:QIE17881.1;Name=QIE17881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052228.1;locus_tag=IXO1088_006180;product=murein L%2CD-transpeptidase;protein_id=QIE17881.1;transl_table=11 CP040687.1 Genbank gene 1262758 1265472 . - . ID=gene-IXO1088_006185;Name=IXO1088_006185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006185 CP040687.1 Protein Homology CDS 1262758 1265472 . - 0 ID=cds-QIE15095.1;Parent=gene-IXO1088_006185;Dbxref=NCBI_GP:QIE15095.1;Name=QIE15095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377055.1;locus_tag=IXO1088_006185;product=TonB-dependent receptor;protein_id=QIE15095.1;transl_table=11 CP040687.1 Genbank gene 1265602 1266777 . - . ID=gene-IXO1088_006190;Name=IXO1088_006190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006190 CP040687.1 Protein Homology CDS 1265602 1266777 . - 0 ID=cds-QIE15096.1;Parent=gene-IXO1088_006190;Dbxref=NCBI_GP:QIE15096.1;Name=QIE15096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638554.1;locus_tag=IXO1088_006190;product=hypothetical protein;protein_id=QIE15096.1;transl_table=11 CP040687.1 Genbank pseudogene 1266912 1268870 . - . ID=gene-IXO1088_006195;Name=IXO1088_006195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_006195;pseudo=true CP040687.1 Protein Homology CDS 1266912 1268870 . - 0 ID=cds-IXO1088_006195;Parent=gene-IXO1088_006195;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504414.1;locus_tag=IXO1088_006195;product=acetyl-CoA hydrolase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1269046 1269693 . + . ID=gene-IXO1088_006200;Name=IXO1088_006200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006200 CP040687.1 Protein Homology CDS 1269046 1269693 . + 0 ID=cds-QIE17882.1;Parent=gene-IXO1088_006200;Dbxref=NCBI_GP:QIE17882.1;Name=QIE17882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156894.1;locus_tag=IXO1088_006200;product=thermostable hemolysin;protein_id=QIE17882.1;transl_table=11 CP040687.1 Genbank gene 1269690 1271189 . + . ID=gene-IXO1088_006205;Name=IXO1088_006205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006205 CP040687.1 Protein Homology CDS 1269690 1271189 . + 0 ID=cds-QIE15097.1;Parent=gene-IXO1088_006205;Dbxref=NCBI_GP:QIE15097.1;Name=QIE15097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156895.1;locus_tag=IXO1088_006205;product=long-chain fatty acid--CoA ligase;protein_id=QIE15097.1;transl_table=11 CP040687.1 Genbank gene 1271186 1271860 . + . ID=gene-IXO1088_006210;Name=IXO1088_006210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006210 CP040687.1 Protein Homology CDS 1271186 1271860 . + 0 ID=cds-QIE15098.1;Parent=gene-IXO1088_006210;Dbxref=NCBI_GP:QIE15098.1;Name=QIE15098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407814.1;locus_tag=IXO1088_006210;product=iron-containing redox enzyme family protein;protein_id=QIE15098.1;transl_table=11 CP040687.1 Genbank gene 1271860 1272699 . + . ID=gene-IXO1088_006215;Name=IXO1088_006215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006215 CP040687.1 Protein Homology CDS 1271860 1272699 . + 0 ID=cds-QIE15099.1;Parent=gene-IXO1088_006215;Dbxref=NCBI_GP:QIE15099.1;Name=QIE15099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160090.1;locus_tag=IXO1088_006215;product=SDR family oxidoreductase;protein_id=QIE15099.1;transl_table=11 CP040687.1 Genbank pseudogene 1272680 1273336 . + . ID=gene-IXO1088_006220;Name=IXO1088_006220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_006220;pseudo=true CP040687.1 Protein Homology CDS 1272680 1273336 . + 0 ID=cds-IXO1088_006220;Parent=gene-IXO1088_006220;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156898.1;locus_tag=IXO1088_006220;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1273366 1274064 . + . ID=gene-IXO1088_006225;Name=IXO1088_006225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006225 CP040687.1 Protein Homology CDS 1273366 1274064 . + 0 ID=cds-QIE15100.1;Parent=gene-IXO1088_006225;Dbxref=NCBI_GP:QIE15100.1;Name=QIE15100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407818.1;locus_tag=IXO1088_006225;product=response regulator transcription factor;protein_id=QIE15100.1;transl_table=11 CP040687.1 Genbank gene 1274082 1275443 . + . ID=gene-IXO1088_006230;Name=IXO1088_006230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006230 CP040687.1 Protein Homology CDS 1274082 1275443 . + 0 ID=cds-QIE17883.1;Parent=gene-IXO1088_006230;Dbxref=NCBI_GP:QIE17883.1;Name=QIE17883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162717.1;locus_tag=IXO1088_006230;product=two-component sensor histidine kinase;protein_id=QIE17883.1;transl_table=11 CP040687.1 Genbank gene 1275543 1275908 . + . ID=gene-IXO1088_006235;Name=IXO1088_006235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006235 CP040687.1 Protein Homology CDS 1275543 1275908 . + 0 ID=cds-QIE15101.1;Parent=gene-IXO1088_006235;Dbxref=NCBI_GP:QIE15101.1;Name=QIE15101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156901.1;locus_tag=IXO1088_006235;product=BlaI/MecI/CopY family transcriptional regulator;protein_id=QIE15101.1;transl_table=11 CP040687.1 Genbank gene 1275898 1277220 . + . ID=gene-IXO1088_006240;Name=IXO1088_006240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006240 CP040687.1 Protein Homology CDS 1275898 1277220 . + 0 ID=cds-QIE15102.1;Parent=gene-IXO1088_006240;Dbxref=NCBI_GP:QIE15102.1;Name=QIE15102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090943.1;locus_tag=IXO1088_006240;product=TonB family protein;protein_id=QIE15102.1;transl_table=11 CP040687.1 Genbank gene 1277217 1277801 . + . ID=gene-IXO1088_006245;Name=IXO1088_006245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006245 CP040687.1 Protein Homology CDS 1277217 1277801 . + 0 ID=cds-QIE15103.1;Parent=gene-IXO1088_006245;Dbxref=NCBI_GP:QIE15103.1;Name=QIE15103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156903.1;locus_tag=IXO1088_006245;product=hypothetical protein;protein_id=QIE15103.1;transl_table=11 CP040687.1 Genbank gene 1278144 1278758 . - . ID=gene-IXO1088_006250;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=IXO1088_006250 CP040687.1 Protein Homology CDS 1278144 1278758 . - 0 ID=cds-QIE15104.1;Parent=gene-IXO1088_006250;Dbxref=NCBI_GP:QIE15104.1;Name=QIE15104.1;gbkey=CDS;gene=modC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638548.1;locus_tag=IXO1088_006250;product=molybdenum ABC transporter ATP-binding protein;protein_id=QIE15104.1;transl_table=11 CP040687.1 Genbank gene 1278758 1279450 . - . ID=gene-IXO1088_006255;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=IXO1088_006255 CP040687.1 Protein Homology CDS 1278758 1279450 . - 0 ID=cds-QIE15105.1;Parent=gene-IXO1088_006255;Dbxref=NCBI_GP:QIE15105.1;Name=QIE15105.1;gbkey=CDS;gene=modB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052221.1;locus_tag=IXO1088_006255;product=molybdate ABC transporter permease subunit;protein_id=QIE15105.1;transl_table=11 CP040687.1 Genbank gene 1279461 1280237 . - . ID=gene-IXO1088_006260;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=IXO1088_006260 CP040687.1 Protein Homology CDS 1279461 1280237 . - 0 ID=cds-QIE15106.1;Parent=gene-IXO1088_006260;Dbxref=NCBI_GP:QIE15106.1;Name=QIE15106.1;gbkey=CDS;gene=modA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638546.1;locus_tag=IXO1088_006260;product=molybdate ABC transporter substrate-binding protein;protein_id=QIE15106.1;transl_table=11 CP040687.1 Genbank gene 1280308 1281138 . - . ID=gene-IXO1088_006265;Name=IXO1088_006265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006265 CP040687.1 Protein Homology CDS 1280308 1281138 . - 0 ID=cds-QIE15107.1;Parent=gene-IXO1088_006265;Dbxref=NCBI_GP:QIE15107.1;Name=QIE15107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364600.1;locus_tag=IXO1088_006265;product=MBL fold metallo-hydrolase;protein_id=QIE15107.1;transl_table=11 CP040687.1 Genbank gene 1281152 1281925 . - . ID=gene-IXO1088_006270;Name=IXO1088_006270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006270 CP040687.1 Protein Homology CDS 1281152 1281925 . - 0 ID=cds-QIE17884.1;Parent=gene-IXO1088_006270;Dbxref=NCBI_GP:QIE17884.1;Name=QIE17884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005933032.1;locus_tag=IXO1088_006270;product=S1/P1 nuclease;protein_id=QIE17884.1;transl_table=11 CP040687.1 Genbank pseudogene 1282274 1283307 . + . ID=gene-IXO1088_006275;Name=IXO1088_006275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_006275;pseudo=true CP040687.1 Protein Homology CDS 1282274 1283307 . + 0 ID=cds-IXO1088_006275;Parent=gene-IXO1088_006275;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_006275;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1283330 1284364 . - . ID=gene-IXO1088_006280;Name=IXO1088_006280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006280 CP040687.1 Protein Homology CDS 1283330 1284364 . - 0 ID=cds-QIE17885.1;Parent=gene-IXO1088_006280;Dbxref=NCBI_GP:QIE17885.1;Name=QIE17885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611268.1;locus_tag=IXO1088_006280;product=IS630 family transposase;protein_id=QIE17885.1;transl_table=11 CP040687.1 Genbank pseudogene 1284422 1284708 . + . ID=gene-IXO1088_006285;Name=IXO1088_006285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_006285;pseudo=true CP040687.1 Protein Homology CDS 1284422 1284708 . + 0 ID=cds-IXO1088_006285;Parent=gene-IXO1088_006285;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_006285;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1284792 1285384 . - . ID=gene-IXO1088_006290;Name=IXO1088_006290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_006290;pseudo=true CP040687.1 Protein Homology CDS 1284792 1285384 . - 0 ID=cds-IXO1088_006290;Parent=gene-IXO1088_006290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638541.1;locus_tag=IXO1088_006290;product=OmpW family protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1285503 1286090 . - . ID=gene-IXO1088_006295;Name=IXO1088_006295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_006295;pseudo=true CP040687.1 Protein Homology CDS 1285503 1286090 . - 0 ID=cds-IXO1088_006295;Parent=gene-IXO1088_006295;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638540.1;locus_tag=IXO1088_006295;product=OmpW family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1286912 1287913 . + . ID=gene-IXO1088_006300;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=IXO1088_006300 CP040687.1 Protein Homology CDS 1286912 1287913 . + 0 ID=cds-QIE15108.1;Parent=gene-IXO1088_006300;Dbxref=NCBI_GP:QIE15108.1;Name=QIE15108.1;gbkey=CDS;gene=gap;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638538.1;locus_tag=IXO1088_006300;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=QIE15108.1;transl_table=11 CP040687.1 Genbank pseudogene 1288001 1288261 . - . ID=gene-IXO1088_006305;Name=IXO1088_006305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_006305;pseudo=true CP040687.1 Protein Homology CDS 1288001 1288261 . - 0 ID=cds-IXO1088_006305;Parent=gene-IXO1088_006305;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003469506.1;locus_tag=IXO1088_006305;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1288301 1289064 . + . ID=gene-IXO1088_006310;Name=IXO1088_006310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006310 CP040687.1 Protein Homology CDS 1288301 1288616 . + 0 ID=cds-QIE15109.1;Parent=gene-IXO1088_006310;Dbxref=NCBI_GP:QIE15109.1;Name=QIE15109.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_006310;product=IS5 family transposase;protein_id=QIE15109.1;transl_table=11 CP040687.1 Protein Homology CDS 1288616 1289064 . + 2 ID=cds-QIE15109.1;Parent=gene-IXO1088_006310;Dbxref=NCBI_GP:QIE15109.1;Name=QIE15109.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_006310;product=IS5 family transposase;protein_id=QIE15109.1;transl_table=11 CP040687.1 Genbank gene 1289153 1290118 . + . ID=gene-IXO1088_006315;Name=IXO1088_006315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006315 CP040687.1 Protein Homology CDS 1289153 1290118 . + 0 ID=cds-QIE15110.1;Parent=gene-IXO1088_006315;Dbxref=NCBI_GP:QIE15110.1;Name=QIE15110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_006315;product=IS1595 family transposase;protein_id=QIE15110.1;transl_table=11 CP040687.1 Genbank gene 1290228 1291547 . - . ID=gene-IXO1088_006320;Name=IXO1088_006320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006320 CP040687.1 Protein Homology CDS 1290228 1291547 . - 0 ID=cds-QIE17886.1;Parent=gene-IXO1088_006320;Dbxref=NCBI_GP:QIE17886.1;Name=QIE17886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237347.1;locus_tag=IXO1088_006320;product=HAMP domain-containing histidine kinase;protein_id=QIE17886.1;transl_table=11 CP040687.1 Genbank gene 1292010 1292687 . - . ID=gene-IXO1088_006325;Name=IXO1088_006325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006325 CP040687.1 Protein Homology CDS 1292010 1292687 . - 0 ID=cds-QIE15111.1;Parent=gene-IXO1088_006325;Dbxref=NCBI_GP:QIE15111.1;Name=QIE15111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638454.1;locus_tag=IXO1088_006325;product=response regulator transcription factor;protein_id=QIE15111.1;transl_table=11 CP040687.1 Genbank gene 1292767 1293156 . - . ID=gene-IXO1088_006330;Name=IXO1088_006330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006330 CP040687.1 Protein Homology CDS 1292767 1293156 . - 0 ID=cds-QIE15112.1;Parent=gene-IXO1088_006330;Dbxref=NCBI_GP:QIE15112.1;Name=QIE15112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116874.1;locus_tag=IXO1088_006330;product=hypothetical protein;protein_id=QIE15112.1;transl_table=11 CP040687.1 Genbank gene 1293381 1294179 . - . ID=gene-IXO1088_006335;Name=IXO1088_006335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006335 CP040687.1 Protein Homology CDS 1293908 1294179 . - 0 ID=cds-QIE15113.1;Parent=gene-IXO1088_006335;Dbxref=NCBI_GP:QIE15113.1;Name=QIE15113.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_006335;product=IS5 family transposase;protein_id=QIE15113.1;transl_table=11 CP040687.1 Protein Homology CDS 1293381 1293909 . - 1 ID=cds-QIE15113.1;Parent=gene-IXO1088_006335;Dbxref=NCBI_GP:QIE15113.1;Name=QIE15113.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_006335;product=IS5 family transposase;protein_id=QIE15113.1;transl_table=11 CP040687.1 Genbank gene 1294222 1295109 . - . ID=gene-IXO1088_006340;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=IXO1088_006340 CP040687.1 Protein Homology CDS 1294222 1295109 . - 0 ID=cds-QIE17887.1;Parent=gene-IXO1088_006340;Dbxref=NCBI_GP:QIE17887.1;Name=QIE17887.1;gbkey=CDS;gene=rimK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407835.1;locus_tag=IXO1088_006340;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=QIE17887.1;transl_table=11 CP040687.1 Genbank gene 1295543 1296523 . - . ID=gene-IXO1088_006345;Name=IXO1088_006345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006345 CP040687.1 Protein Homology CDS 1295543 1296523 . - 0 ID=cds-QIE17888.1;Parent=gene-IXO1088_006345;Dbxref=NCBI_GP:QIE17888.1;Name=QIE17888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=IXO1088_006345;product=IS5 family transposase;protein_id=QIE17888.1;transl_table=11 CP040687.1 Genbank gene 1296698 1298785 . - . ID=gene-IXO1088_006350;Name=IXO1088_006350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006350 CP040687.1 Protein Homology CDS 1296698 1298785 . - 0 ID=cds-QIE15114.1;Parent=gene-IXO1088_006350;Dbxref=NCBI_GP:QIE15114.1;Name=QIE15114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407838.1;locus_tag=IXO1088_006350;product=phosphatase PAP2 family protein;protein_id=QIE15114.1;transl_table=11 CP040687.1 Genbank gene 1298937 1299596 . + . ID=gene-IXO1088_006355;Name=IXO1088_006355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006355 CP040687.1 Protein Homology CDS 1298937 1299596 . + 0 ID=cds-QIE15115.1;Parent=gene-IXO1088_006355;Dbxref=NCBI_GP:QIE15115.1;Name=QIE15115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303234.1;locus_tag=IXO1088_006355;product=serine/threonine protein kinase;protein_id=QIE15115.1;transl_table=11 CP040687.1 Genbank gene 1299677 1300475 . + . ID=gene-IXO1088_006360;Name=IXO1088_006360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006360 CP040687.1 Protein Homology CDS 1299677 1299948 . + 0 ID=cds-QIE15116.1;Parent=gene-IXO1088_006360;Dbxref=NCBI_GP:QIE15116.1;Name=QIE15116.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_006360;product=IS5 family transposase;protein_id=QIE15116.1;transl_table=11 CP040687.1 Protein Homology CDS 1299947 1300475 . + 1 ID=cds-QIE15116.1;Parent=gene-IXO1088_006360;Dbxref=NCBI_GP:QIE15116.1;Name=QIE15116.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_006360;product=IS5 family transposase;protein_id=QIE15116.1;transl_table=11 CP040687.1 Genbank gene 1300497 1300676 . + . ID=gene-IXO1088_006365;Name=IXO1088_006365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006365 CP040687.1 Protein Homology CDS 1300497 1300676 . + 0 ID=cds-QIE15117.1;Parent=gene-IXO1088_006365;Dbxref=NCBI_GP:QIE15117.1;Name=QIE15117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301580.1;locus_tag=IXO1088_006365;product=hypothetical protein;protein_id=QIE15117.1;transl_table=11 CP040687.1 Genbank gene 1300695 1301099 . + . ID=gene-IXO1088_006370;Name=IXO1088_006370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006370 CP040687.1 Protein Homology CDS 1300695 1301099 . + 0 ID=cds-QIE15118.1;Parent=gene-IXO1088_006370;Dbxref=NCBI_GP:QIE15118.1;Name=QIE15118.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12889.5;locus_tag=IXO1088_006370;product=DUF3829 domain-containing protein;protein_id=QIE15118.1;transl_table=11 CP040687.1 Genbank gene 1301133 1301492 . + . ID=gene-IXO1088_006375;Name=IXO1088_006375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006375 CP040687.1 Protein Homology CDS 1301133 1301492 . + 0 ID=cds-QIE15119.1;Parent=gene-IXO1088_006375;Dbxref=NCBI_GP:QIE15119.1;Name=QIE15119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258046.1;locus_tag=IXO1088_006375;product=DUF3829 domain-containing protein;protein_id=QIE15119.1;transl_table=11 CP040687.1 Genbank gene 1301736 1302608 . - . ID=gene-IXO1088_006380;Name=IXO1088_006380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006380 CP040687.1 Protein Homology CDS 1301736 1302608 . - 0 ID=cds-QIE15120.1;Parent=gene-IXO1088_006380;Dbxref=NCBI_GP:QIE15120.1;Name=QIE15120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911973.1;locus_tag=IXO1088_006380;product=ion transporter;protein_id=QIE15120.1;transl_table=11 CP040687.1 Genbank gene 1302681 1303907 . + . ID=gene-IXO1088_006385;Name=IXO1088_006385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006385 CP040687.1 Protein Homology CDS 1302681 1303907 . + 0 ID=cds-QIE15121.1;Parent=gene-IXO1088_006385;Dbxref=NCBI_GP:QIE15121.1;Name=QIE15121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258048.1;locus_tag=IXO1088_006385;product=acetylornithine transaminase;protein_id=QIE15121.1;transl_table=11 CP040687.1 Genbank gene 1304154 1304771 . - . ID=gene-IXO1088_006390;Name=IXO1088_006390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006390 CP040687.1 Protein Homology CDS 1304154 1304771 . - 0 ID=cds-QIE15122.1;Parent=gene-IXO1088_006390;Dbxref=NCBI_GP:QIE15122.1;Name=QIE15122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008577886.1;locus_tag=IXO1088_006390;product=hydrolase;protein_id=QIE15122.1;transl_table=11 CP040687.1 Genbank pseudogene 1305314 1306238 . + . ID=gene-IXO1088_006395;Name=IXO1088_006395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_006395;pseudo=true CP040687.1 Protein Homology CDS 1305314 1306238 . + 0 ID=cds-IXO1088_006395;Parent=gene-IXO1088_006395;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638625.1;locus_tag=IXO1088_006395;product=TonB-dependent receptor;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1306332 1306778 . + . ID=gene-IXO1088_006400;Name=IXO1088_006400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_006400;pseudo=true CP040687.1 Protein Homology CDS 1306332 1306778 . + 0 ID=cds-IXO1088_006400;Parent=gene-IXO1088_006400;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638624.1;locus_tag=IXO1088_006400;product=FAD-binding protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1306767 1307723 . - . ID=gene-IXO1088_006405;Name=IXO1088_006405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006405 CP040687.1 Protein Homology CDS 1306767 1307723 . - 0 ID=cds-QIE15123.1;Parent=gene-IXO1088_006405;Dbxref=NCBI_GP:QIE15123.1;Name=QIE15123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1088_006405;product=IS30-like element IS1112b family transposase;protein_id=QIE15123.1;transl_table=11 CP040687.1 Genbank pseudogene 1307816 1308973 . + . ID=gene-IXO1088_006410;Name=IXO1088_006410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_006410;pseudo=true CP040687.1 Protein Homology CDS 1307816 1308973 . + 0 ID=cds-IXO1088_006410;Parent=gene-IXO1088_006410;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638624.1;locus_tag=IXO1088_006410;product=flavin monoamine oxidase family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1308970 1309395 . + . ID=gene-IXO1088_006415;Name=IXO1088_006415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006415 CP040687.1 Protein Homology CDS 1308970 1309395 . + 0 ID=cds-QIE15124.1;Parent=gene-IXO1088_006415;Dbxref=NCBI_GP:QIE15124.1;Name=QIE15124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638623.1;locus_tag=IXO1088_006415;product=cytochrome c;protein_id=QIE15124.1;transl_table=11 CP040687.1 Genbank gene 1309420 1309923 . + . ID=gene-IXO1088_006420;Name=IXO1088_006420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006420 CP040687.1 Protein Homology CDS 1309420 1309923 . + 0 ID=cds-QIE15125.1;Parent=gene-IXO1088_006420;Dbxref=NCBI_GP:QIE15125.1;Name=QIE15125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348483.1;locus_tag=IXO1088_006420;product=hypothetical protein;protein_id=QIE15125.1;transl_table=11 CP040687.1 Genbank pseudogene 1309954 1311154 . + . ID=gene-IXO1088_006425;Name=IXO1088_006425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_006425;pseudo=true CP040687.1 Protein Homology CDS 1309954 1311154 . + 0 ID=cds-IXO1088_006425;Parent=gene-IXO1088_006425;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638621.1;locus_tag=IXO1088_006425;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1311366 1311815 . + . ID=gene-IXO1088_006430;Name=azu;gbkey=Gene;gene=azu;gene_biotype=protein_coding;locus_tag=IXO1088_006430 CP040687.1 Protein Homology CDS 1311366 1311815 . + 0 ID=cds-QIE15126.1;Parent=gene-IXO1088_006430;Dbxref=NCBI_GP:QIE15126.1;Name=QIE15126.1;gbkey=CDS;gene=azu;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638620.1;locus_tag=IXO1088_006430;product=azurin;protein_id=QIE15126.1;transl_table=11 CP040687.1 Genbank pseudogene 1311894 1314678 . - . ID=gene-IXO1088_006435;Name=IXO1088_006435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_006435;pseudo=true CP040687.1 Protein Homology CDS 1311894 1314678 . - 0 ID=cds-IXO1088_006435;Parent=gene-IXO1088_006435;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851072.1;locus_tag=IXO1088_006435;product=tetratricopeptide repeat protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1314697 1314933 . - . ID=gene-IXO1088_006440;Name=IXO1088_006440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006440 CP040687.1 Protein Homology CDS 1314697 1314933 . - 0 ID=cds-QIE15127.1;Parent=gene-IXO1088_006440;Dbxref=NCBI_GP:QIE15127.1;Name=QIE15127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504468.1;locus_tag=IXO1088_006440;product=hypothetical protein;protein_id=QIE15127.1;transl_table=11 CP040687.1 Genbank gene 1315069 1316037 . - . ID=gene-IXO1088_006445;Name=IXO1088_006445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006445 CP040687.1 Protein Homology CDS 1315069 1316037 . - 0 ID=cds-QIE15128.1;Parent=gene-IXO1088_006445;Dbxref=NCBI_GP:QIE15128.1;Name=QIE15128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_006445;product=IS5-like element ISXo1 family transposase;protein_id=QIE15128.1;transl_table=11 CP040687.1 Genbank gene 1316366 1317655 . - . ID=gene-IXO1088_006450;Name=IXO1088_006450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006450 CP040687.1 Protein Homology CDS 1316366 1317655 . - 0 ID=cds-QIE15129.1;Parent=gene-IXO1088_006450;Dbxref=NCBI_GP:QIE15129.1;Name=QIE15129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638618.1;locus_tag=IXO1088_006450;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=QIE15129.1;transl_table=11 CP040687.1 Genbank pseudogene 1317941 1319765 . + . ID=gene-IXO1088_006455;Name=IXO1088_006455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_006455;pseudo=true CP040687.1 Protein Homology CDS 1317941 1319765 . + 0 ID=cds-IXO1088_006455;Parent=gene-IXO1088_006455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638617.1;locus_tag=IXO1088_006455;product=TonB-dependent receptor;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1321617 1322486 . - . ID=gene-IXO1088_006460;Name=IXO1088_006460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006460 CP040687.1 Protein Homology CDS 1321617 1322486 . - 0 ID=cds-QIE15130.1;Parent=gene-IXO1088_006460;Dbxref=NCBI_GP:QIE15130.1;Name=QIE15130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258055.1;locus_tag=IXO1088_006460;product=IS30 family transposase;protein_id=QIE15130.1;transl_table=11 CP040687.1 Genbank gene 1322508 1323179 . - . ID=gene-IXO1088_006465;Name=IXO1088_006465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006465 CP040687.1 Protein Homology CDS 1322508 1323179 . - 0 ID=cds-QIE15131.1;Parent=gene-IXO1088_006465;Dbxref=NCBI_GP:QIE15131.1;Name=QIE15131.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=IXO1088_006465;product=IS3 family transposase;protein_id=QIE15131.1;transl_table=11 CP040687.1 Genbank gene 1323176 1323397 . - . ID=gene-IXO1088_006470;Name=IXO1088_006470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006470 CP040687.1 Protein Homology CDS 1323176 1323397 . - 0 ID=cds-QIE15132.1;Parent=gene-IXO1088_006470;Dbxref=NCBI_GP:QIE15132.1;Name=QIE15132.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01527.18;locus_tag=IXO1088_006470;product=IS3 family transposase;protein_id=QIE15132.1;transl_table=11 CP040687.1 Genbank gene 1323571 1327698 . - . ID=gene-IXO1088_006475;Name=IXO1088_006475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006475 CP040687.1 Protein Homology CDS 1323571 1327698 . - 0 ID=cds-QIE15133.1;Parent=gene-IXO1088_006475;Dbxref=NCBI_GP:QIE15133.1;Name=QIE15133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408411.1;locus_tag=IXO1088_006475;product=avirulence protein;protein_id=QIE15133.1;transl_table=11 CP040687.1 Genbank gene 1327922 1328221 . - . ID=gene-IXO1088_006480;Name=IXO1088_006480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006480 CP040687.1 Protein Homology CDS 1327922 1328221 . - 0 ID=cds-QIE15134.1;Parent=gene-IXO1088_006480;Dbxref=NCBI_GP:QIE15134.1;Name=QIE15134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408930.1;locus_tag=IXO1088_006480;product=hypothetical protein;protein_id=QIE15134.1;transl_table=11 CP040687.1 Genbank gene 1328225 1328419 . - . ID=gene-IXO1088_006485;Name=IXO1088_006485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006485 CP040687.1 Protein Homology CDS 1328225 1328419 . - 0 ID=cds-QIE15135.1;Parent=gene-IXO1088_006485;Dbxref=NCBI_GP:QIE15135.1;Name=QIE15135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444931.1;locus_tag=IXO1088_006485;product=hypothetical protein;protein_id=QIE15135.1;transl_table=11 CP040687.1 Genbank pseudogene 1328688 1331690 . - . ID=gene-IXO1088_006490;Name=IXO1088_006490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_006490;pseudo=true CP040687.1 Protein Homology CDS 1328688 1331690 . - 0 ID=cds-IXO1088_006490;Parent=gene-IXO1088_006490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407855.1;locus_tag=IXO1088_006490;product=avirulence protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1331914 1332213 . - . ID=gene-IXO1088_006495;Name=IXO1088_006495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006495 CP040687.1 Protein Homology CDS 1331914 1332213 . - 0 ID=cds-QIE15136.1;Parent=gene-IXO1088_006495;Dbxref=NCBI_GP:QIE15136.1;Name=QIE15136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408930.1;locus_tag=IXO1088_006495;product=hypothetical protein;protein_id=QIE15136.1;transl_table=11 CP040687.1 Genbank gene 1332217 1332411 . - . ID=gene-IXO1088_006500;Name=IXO1088_006500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006500 CP040687.1 Protein Homology CDS 1332217 1332411 . - 0 ID=cds-QIE15137.1;Parent=gene-IXO1088_006500;Dbxref=NCBI_GP:QIE15137.1;Name=QIE15137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444931.1;locus_tag=IXO1088_006500;product=hypothetical protein;protein_id=QIE15137.1;transl_table=11 CP040687.1 Genbank gene 1332680 1336174 . - . ID=gene-IXO1088_006505;Name=IXO1088_006505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006505 CP040687.1 Protein Homology CDS 1332680 1336174 . - 0 ID=cds-QIE17889.1;Parent=gene-IXO1088_006505;Dbxref=NCBI_GP:QIE17889.1;Name=QIE17889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258958.1;locus_tag=IXO1088_006505;product=Avirulence protein AvrBs3;protein_id=QIE17889.1;transl_table=11 CP040687.1 Genbank gene 1336315 1336614 . - . ID=gene-IXO1088_006510;Name=IXO1088_006510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006510 CP040687.1 Protein Homology CDS 1336315 1336614 . - 0 ID=cds-QIE15138.1;Parent=gene-IXO1088_006510;Dbxref=NCBI_GP:QIE15138.1;Name=QIE15138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408930.1;locus_tag=IXO1088_006510;product=hypothetical protein;protein_id=QIE15138.1;transl_table=11 CP040687.1 Genbank gene 1336618 1336812 . - . ID=gene-IXO1088_006515;Name=IXO1088_006515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006515 CP040687.1 Protein Homology CDS 1336618 1336812 . - 0 ID=cds-QIE15139.1;Parent=gene-IXO1088_006515;Dbxref=NCBI_GP:QIE15139.1;Name=QIE15139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444931.1;locus_tag=IXO1088_006515;product=hypothetical protein;protein_id=QIE15139.1;transl_table=11 CP040687.1 Genbank pseudogene 1337080 1341524 . - . ID=gene-IXO1088_006520;Name=IXO1088_006520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_006520;pseudo=true CP040687.1 Protein Homology CDS 1337080 1341524 . - 0 ID=cds-IXO1088_006520;Parent=gene-IXO1088_006520;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445810.1;locus_tag=IXO1088_006520;product=avirulence protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1341748 1342047 . - . ID=gene-IXO1088_006525;Name=IXO1088_006525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006525 CP040687.1 Protein Homology CDS 1341748 1342047 . - 0 ID=cds-QIE15140.1;Parent=gene-IXO1088_006525;Dbxref=NCBI_GP:QIE15140.1;Name=QIE15140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408930.1;locus_tag=IXO1088_006525;product=hypothetical protein;protein_id=QIE15140.1;transl_table=11 CP040687.1 Genbank gene 1342051 1342245 . - . ID=gene-IXO1088_006530;Name=IXO1088_006530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006530 CP040687.1 Protein Homology CDS 1342051 1342245 . - 0 ID=cds-QIE15141.1;Parent=gene-IXO1088_006530;Dbxref=NCBI_GP:QIE15141.1;Name=QIE15141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444931.1;locus_tag=IXO1088_006530;product=hypothetical protein;protein_id=QIE15141.1;transl_table=11 CP040687.1 Genbank gene 1342514 1346227 . - . ID=gene-IXO1088_006535;Name=IXO1088_006535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006535 CP040687.1 Protein Homology CDS 1342514 1346227 . - 0 ID=cds-QIE15142.1;Parent=gene-IXO1088_006535;Dbxref=NCBI_GP:QIE15142.1;Name=QIE15142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407860.1;locus_tag=IXO1088_006535;product=avirulence protein;protein_id=QIE15142.1;transl_table=11 CP040687.1 Genbank pseudogene 1346359 1347009 . + . ID=gene-IXO1088_006540;Name=IXO1088_006540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_006540;pseudo=true CP040687.1 Protein Homology CDS 1346359 1347009 . + 0 ID=cds-IXO1088_006540;Parent=gene-IXO1088_006540;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407232.1;locus_tag=IXO1088_006540;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1347018 1347344 . + . ID=gene-IXO1088_006545;Name=IXO1088_006545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_006545;pseudo=true CP040687.1 Protein Homology CDS 1347018 1347344 . + 0 ID=cds-IXO1088_006545;Parent=gene-IXO1088_006545;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409196.1;locus_tag=IXO1088_006545;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1347367 1347681 . + . ID=gene-IXO1088_006550;Name=IXO1088_006550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_006550;pseudo=true CP040687.1 Protein Homology CDS 1347367 1347681 . + 0 ID=cds-IXO1088_006550;Parent=gene-IXO1088_006550;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259933.1;locus_tag=IXO1088_006550;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1347699 1348763 . - . ID=gene-IXO1088_006555;Name=IXO1088_006555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006555 CP040687.1 Protein Homology CDS 1347699 1348763 . - 0 ID=cds-QIE15143.1;Parent=gene-IXO1088_006555;Dbxref=NCBI_GP:QIE15143.1;Name=QIE15143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638192.1;locus_tag=IXO1088_006555;product=uroporphyrinogen decarboxylase;protein_id=QIE15143.1;transl_table=11 CP040687.1 Genbank gene 1348778 1349029 . - . ID=gene-IXO1088_006560;Name=IXO1088_006560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006560 CP040687.1 Protein Homology CDS 1348778 1349029 . - 0 ID=cds-QIE15144.1;Parent=gene-IXO1088_006560;Dbxref=NCBI_GP:QIE15144.1;Name=QIE15144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407864.1;locus_tag=IXO1088_006560;product=hypothetical protein;protein_id=QIE15144.1;transl_table=11 CP040687.1 Genbank gene 1349331 1350443 . - . ID=gene-IXO1088_006565;Name=IXO1088_006565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006565 CP040687.1 Protein Homology CDS 1349331 1350443 . - 0 ID=cds-QIE15145.1;Parent=gene-IXO1088_006565;Dbxref=NCBI_GP:QIE15145.1;Name=QIE15145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090724.1;locus_tag=IXO1088_006565;product=3-dehydroquinate synthase;protein_id=QIE15145.1;transl_table=11 CP040687.1 Genbank gene 1350440 1350982 . - . ID=gene-IXO1088_006570;Name=IXO1088_006570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006570 CP040687.1 Protein Homology CDS 1350440 1350982 . - 0 ID=cds-QIE15146.1;Parent=gene-IXO1088_006570;Dbxref=NCBI_GP:QIE15146.1;Name=QIE15146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638189.1;locus_tag=IXO1088_006570;product=shikimate kinase;protein_id=QIE15146.1;transl_table=11 CP040687.1 Genbank gene 1351149 1351748 . + . ID=gene-IXO1088_006575;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=IXO1088_006575 CP040687.1 Protein Homology CDS 1351149 1351748 . + 0 ID=cds-QIE15147.1;Parent=gene-IXO1088_006575;Dbxref=NCBI_GP:QIE15147.1;Name=QIE15147.1;gbkey=CDS;gene=pdxH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638188.1;locus_tag=IXO1088_006575;product=pyridoxamine 5'-phosphate oxidase;protein_id=QIE15147.1;transl_table=11 CP040687.1 Genbank gene 1351929 1352345 . + . ID=gene-IXO1088_006580;Name=IXO1088_006580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006580 CP040687.1 Protein Homology CDS 1351929 1352345 . + 0 ID=cds-QIE15148.1;Parent=gene-IXO1088_006580;Dbxref=NCBI_GP:QIE15148.1;Name=QIE15148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489526.1;locus_tag=IXO1088_006580;product=DUF2170 family protein;protein_id=QIE15148.1;transl_table=11 CP040687.1 Genbank gene 1352358 1353131 . + . ID=gene-IXO1088_006585;Name=IXO1088_006585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006585 CP040687.1 Protein Homology CDS 1352358 1353131 . + 0 ID=cds-QIE15149.1;Parent=gene-IXO1088_006585;Dbxref=NCBI_GP:QIE15149.1;Name=QIE15149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638186.1;locus_tag=IXO1088_006585;product=PspA/IM30 family protein;protein_id=QIE15149.1;transl_table=11 CP040687.1 Genbank gene 1353157 1354239 . + . ID=gene-IXO1088_006590;Name=IXO1088_006590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006590 CP040687.1 Protein Homology CDS 1353157 1354239 . + 0 ID=cds-QIE15150.1;Parent=gene-IXO1088_006590;Dbxref=NCBI_GP:QIE15150.1;Name=QIE15150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971371.1;locus_tag=IXO1088_006590;product=potassium channel protein;protein_id=QIE15150.1;transl_table=11 CP040687.1 Genbank gene 1354242 1354913 . + . ID=gene-IXO1088_006595;Name=IXO1088_006595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006595 CP040687.1 Protein Homology CDS 1354242 1354913 . + 0 ID=cds-QIE15151.1;Parent=gene-IXO1088_006595;Dbxref=NCBI_GP:QIE15151.1;Name=QIE15151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638184.1;locus_tag=IXO1088_006595;product=DUF2491 family protein;protein_id=QIE15151.1;transl_table=11 CP040687.1 Genbank gene 1354951 1355355 . + . ID=gene-IXO1088_006600;Name=IXO1088_006600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006600 CP040687.1 Protein Homology CDS 1354951 1355355 . + 0 ID=cds-QIE15152.1;Parent=gene-IXO1088_006600;Dbxref=NCBI_GP:QIE15152.1;Name=QIE15152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638183.1;locus_tag=IXO1088_006600;product=DUF350 domain-containing protein;protein_id=QIE15152.1;transl_table=11 CP040687.1 Genbank gene 1355368 1355940 . + . ID=gene-IXO1088_006605;Name=IXO1088_006605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006605 CP040687.1 Protein Homology CDS 1355368 1355940 . + 0 ID=cds-QIE15153.1;Parent=gene-IXO1088_006605;Dbxref=NCBI_GP:QIE15153.1;Name=QIE15153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407870.1;locus_tag=IXO1088_006605;product=DUF1190 domain-containing protein;protein_id=QIE15153.1;transl_table=11 CP040687.1 Genbank gene 1355942 1357108 . + . ID=gene-IXO1088_006610;Name=IXO1088_006610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006610 CP040687.1 Protein Homology CDS 1355942 1357108 . + 0 ID=cds-QIE15154.1;Parent=gene-IXO1088_006610;Dbxref=NCBI_GP:QIE15154.1;Name=QIE15154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638181.1;locus_tag=IXO1088_006610;product=glutathionylspermidine synthase family protein;protein_id=QIE15154.1;transl_table=11 CP040687.1 Genbank pseudogene 1357238 1357455 . + . ID=gene-IXO1088_006615;Name=IXO1088_006615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_006615;pseudo=true CP040687.1 Protein Homology CDS 1357238 1357455 . + 0 ID=cds-IXO1088_006615;Parent=gene-IXO1088_006615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463454.1;locus_tag=IXO1088_006615;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1357575 1358987 . - . ID=gene-IXO1088_006620;Name=IXO1088_006620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_006620;pseudo=true CP040687.1 Protein Homology CDS 1357575 1358987 . - 0 ID=cds-IXO1088_006620;Parent=gene-IXO1088_006620;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162332.1;locus_tag=IXO1088_006620;product=MFS transporter;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1359088 1359534 . + . ID=gene-IXO1088_006625;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=IXO1088_006625 CP040687.1 Protein Homology CDS 1359088 1359534 . + 0 ID=cds-QIE15155.1;Parent=gene-IXO1088_006625;Dbxref=NCBI_GP:QIE15155.1;Name=QIE15155.1;gbkey=CDS;gene=soxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965644.1;locus_tag=IXO1088_006625;product=redox-sensitive transcriptional activator SoxR;protein_id=QIE15155.1;transl_table=11 CP040687.1 Genbank gene 1359754 1361760 . + . ID=gene-IXO1088_006630;Name=IXO1088_006630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006630 CP040687.1 Protein Homology CDS 1359754 1361760 . + 0 ID=cds-QIE15156.1;Parent=gene-IXO1088_006630;Dbxref=NCBI_GP:QIE15156.1;Name=QIE15156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851403.1;locus_tag=IXO1088_006630;product=M1 family metallopeptidase;protein_id=QIE15156.1;transl_table=11 CP040687.1 Genbank gene 1362819 1365965 . + . ID=gene-IXO1088_006635;Name=IXO1088_006635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006635 CP040687.1 Protein Homology CDS 1362819 1365965 . + 0 ID=cds-QIE17890.1;Parent=gene-IXO1088_006635;Dbxref=NCBI_GP:QIE17890.1;Name=QIE17890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638176.1;locus_tag=IXO1088_006635;product=TonB-dependent receptor;protein_id=QIE17890.1;transl_table=11 CP040687.1 Genbank gene 1365985 1366221 . - . ID=gene-IXO1088_006640;Name=IXO1088_006640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006640 CP040687.1 Protein Homology CDS 1365985 1366221 . - 0 ID=cds-QIE15157.1;Parent=gene-IXO1088_006640;Dbxref=NCBI_GP:QIE15157.1;Name=QIE15157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502464.1;locus_tag=IXO1088_006640;product=transcriptional regulator;protein_id=QIE15157.1;transl_table=11 CP040687.1 Genbank gene 1366297 1367049 . + . ID=gene-IXO1088_006645;Name=IXO1088_006645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006645 CP040687.1 Protein Homology CDS 1366297 1367049 . + 0 ID=cds-QIE17891.1;Parent=gene-IXO1088_006645;Dbxref=NCBI_GP:QIE17891.1;Name=QIE17891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051964.1;locus_tag=IXO1088_006645;product=SapC family protein;protein_id=QIE17891.1;transl_table=11 CP040687.1 Genbank gene 1367060 1368106 . + . ID=gene-IXO1088_006650;Name=IXO1088_006650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006650 CP040687.1 Protein Homology CDS 1367060 1368106 . + 0 ID=cds-QIE15158.1;Parent=gene-IXO1088_006650;Dbxref=NCBI_GP:QIE15158.1;Name=QIE15158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445799.1;locus_tag=IXO1088_006650;product=cupin-like domain-containing protein;protein_id=QIE15158.1;transl_table=11 CP040687.1 Genbank gene 1368147 1369664 . + . ID=gene-IXO1088_006655;Name=IXO1088_006655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006655 CP040687.1 Protein Homology CDS 1368147 1369664 . + 0 ID=cds-QIE15159.1;Parent=gene-IXO1088_006655;Dbxref=NCBI_GP:QIE15159.1;Name=QIE15159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017173993.1;locus_tag=IXO1088_006655;product=tryptophan 7-halogenase;protein_id=QIE15159.1;transl_table=11 CP040687.1 Genbank gene 1369702 1370706 . - . ID=gene-IXO1088_006660;Name=IXO1088_006660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006660 CP040687.1 Protein Homology CDS 1369702 1370706 . - 0 ID=cds-QIE15160.1;Parent=gene-IXO1088_006660;Dbxref=NCBI_GP:QIE15160.1;Name=QIE15160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116322.1;locus_tag=IXO1088_006660;product=MBL fold metallo-hydrolase;protein_id=QIE15160.1;transl_table=11 CP040687.1 Genbank gene 1370851 1371249 . - . ID=gene-IXO1088_006665;Name=IXO1088_006665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006665 CP040687.1 Protein Homology CDS 1370851 1371249 . - 0 ID=cds-QIE17892.1;Parent=gene-IXO1088_006665;Dbxref=NCBI_GP:QIE17892.1;Name=QIE17892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165040.1;locus_tag=IXO1088_006665;product=hypothetical protein;protein_id=QIE17892.1;transl_table=11 CP040687.1 Genbank gene 1371380 1371565 . + . ID=gene-IXO1088_006670;Name=IXO1088_006670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006670 CP040687.1 Protein Homology CDS 1371380 1371565 . + 0 ID=cds-QIE17893.1;Parent=gene-IXO1088_006670;Dbxref=NCBI_GP:QIE17893.1;Name=QIE17893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407878.1;locus_tag=IXO1088_006670;product=hypothetical protein;protein_id=QIE17893.1;transl_table=11 CP040687.1 Genbank gene 1371812 1373209 . - . ID=gene-IXO1088_006675;Name=IXO1088_006675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006675 CP040687.1 Protein Homology CDS 1371812 1373209 . - 0 ID=cds-QIE15161.1;Parent=gene-IXO1088_006675;Dbxref=NCBI_GP:QIE15161.1;Name=QIE15161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489555.1;locus_tag=IXO1088_006675;product=trypsin-like peptidase domain-containing protein;protein_id=QIE15161.1;transl_table=11 CP040687.1 Genbank gene 1373649 1375031 . - . ID=gene-IXO1088_006680;Name=IXO1088_006680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006680 CP040687.1 Protein Homology CDS 1373649 1375031 . - 0 ID=cds-QIE15162.1;Parent=gene-IXO1088_006680;Dbxref=NCBI_GP:QIE15162.1;Name=QIE15162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157822.1;locus_tag=IXO1088_006680;product=APC family permease;protein_id=QIE15162.1;transl_table=11 CP040687.1 Genbank gene 1375224 1375988 . + . ID=gene-IXO1088_006685;Name=IXO1088_006685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006685 CP040687.1 Protein Homology CDS 1375224 1375988 . + 0 ID=cds-QIE15163.1;Parent=gene-IXO1088_006685;Dbxref=NCBI_GP:QIE15163.1;Name=QIE15163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964311.1;locus_tag=IXO1088_006685;product=LuxR family transcriptional regulator;protein_id=QIE15163.1;transl_table=11 CP040687.1 Genbank gene 1376302 1377243 . + . ID=gene-IXO1088_006690;Name=IXO1088_006690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006690 CP040687.1 Protein Homology CDS 1376302 1377243 . + 0 ID=cds-QIE15164.1;Parent=gene-IXO1088_006690;Dbxref=NCBI_GP:QIE15164.1;Name=QIE15164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638165.1;locus_tag=IXO1088_006690;product=alpha/beta fold hydrolase;protein_id=QIE15164.1;transl_table=11 CP040687.1 Genbank gene 1377828 1377903 . + . ID=gene-IXO1088_006695;Name=IXO1088_006695;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_006695 CP040687.1 cmsearch ncRNA 1377828 1377903 . + . ID=rna-IXO1088_006695;Parent=gene-IXO1088_006695;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_006695;product=sX9 sRNA CP040687.1 cmsearch exon 1377828 1377903 . + . ID=exon-IXO1088_006695-1;Parent=rna-IXO1088_006695;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_006695;product=sX9 sRNA CP040687.1 Genbank gene 1377999 1379387 . + . ID=gene-IXO1088_006700;Name=IXO1088_006700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006700 CP040687.1 Protein Homology CDS 1377999 1379387 . + 0 ID=cds-QIE15165.1;Parent=gene-IXO1088_006700;Dbxref=NCBI_GP:QIE15165.1;Name=QIE15165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003491164.1;locus_tag=IXO1088_006700;product=amino acid permease;protein_id=QIE15165.1;transl_table=11 CP040687.1 Genbank pseudogene 1379669 1379794 . + . ID=gene-IXO1088_006705;Name=IXO1088_006705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_006705;pseudo=true CP040687.1 Protein Homology CDS 1379669 1379794 . + 0 ID=cds-IXO1088_006705;Parent=gene-IXO1088_006705;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158987.1;locus_tag=IXO1088_006705;product=peptidase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1379809 1381044 . - . ID=gene-IXO1088_006710;Name=IXO1088_006710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006710 CP040687.1 Protein Homology CDS 1379809 1381044 . - 0 ID=cds-QIE15166.1;Parent=gene-IXO1088_006710;Dbxref=NCBI_GP:QIE15166.1;Name=QIE15166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1088_006710;product=ISL3 family transposase;protein_id=QIE15166.1;transl_table=11 CP040687.1 Genbank gene 1381061 1381327 . + . ID=gene-IXO1088_006715;Name=IXO1088_006715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006715 CP040687.1 Protein Homology CDS 1381061 1381327 . + 0 ID=cds-QIE15167.1;Parent=gene-IXO1088_006715;Dbxref=NCBI_GP:QIE15167.1;Name=QIE15167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158987.1;locus_tag=IXO1088_006715;product=hypothetical protein;protein_id=QIE15167.1;transl_table=11 CP040687.1 Genbank gene 1381431 1382831 . + . ID=gene-IXO1088_006720;Name=IXO1088_006720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006720 CP040687.1 Protein Homology CDS 1381431 1382831 . + 0 ID=cds-QIE15168.1;Parent=gene-IXO1088_006720;Dbxref=NCBI_GP:QIE15168.1;Name=QIE15168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638161.1;locus_tag=IXO1088_006720;product=cytochrome ubiquinol oxidase subunit I;protein_id=QIE15168.1;transl_table=11 CP040687.1 Genbank gene 1382831 1383847 . + . ID=gene-IXO1088_006725;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=IXO1088_006725 CP040687.1 Protein Homology CDS 1382831 1383847 . + 0 ID=cds-QIE17894.1;Parent=gene-IXO1088_006725;Dbxref=NCBI_GP:QIE17894.1;Name=QIE17894.1;gbkey=CDS;gene=cydB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638160.1;locus_tag=IXO1088_006725;product=cytochrome d ubiquinol oxidase subunit II;protein_id=QIE17894.1;transl_table=11 CP040687.1 Genbank gene 1383908 1384702 . - . ID=gene-IXO1088_006730;Name=IXO1088_006730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006730 CP040687.1 Protein Homology CDS 1383908 1384702 . - 0 ID=cds-QIE17895.1;Parent=gene-IXO1088_006730;Dbxref=NCBI_GP:QIE17895.1;Name=QIE17895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638159.1;locus_tag=IXO1088_006730;product=phospholipase;protein_id=QIE17895.1;transl_table=11 CP040687.1 Genbank gene 1384856 1386217 . - . ID=gene-IXO1088_006735;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=IXO1088_006735 CP040687.1 Protein Homology CDS 1384856 1386217 . - 0 ID=cds-QIE15169.1;Parent=gene-IXO1088_006735;Dbxref=NCBI_GP:QIE15169.1;Name=QIE15169.1;gbkey=CDS;gene=mgtE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502484.1;locus_tag=IXO1088_006735;product=magnesium transporter;protein_id=QIE15169.1;transl_table=11 CP040687.1 Genbank gene 1386280 1386504 . - . ID=gene-IXO1088_006740;Name=IXO1088_006740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006740 CP040687.1 Protein Homology CDS 1386280 1386504 . - 0 ID=cds-QIE15170.1;Parent=gene-IXO1088_006740;Dbxref=NCBI_GP:QIE15170.1;Name=QIE15170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302427.1;locus_tag=IXO1088_006740;product=hypothetical protein;protein_id=QIE15170.1;transl_table=11 CP040687.1 Genbank gene 1386505 1388235 . - . ID=gene-IXO1088_006745;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=IXO1088_006745 CP040687.1 Protein Homology CDS 1386505 1388235 . - 0 ID=cds-QIE15171.1;Parent=gene-IXO1088_006745;Dbxref=NCBI_GP:QIE15171.1;Name=QIE15171.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802148.1;locus_tag=IXO1088_006745;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=QIE15171.1;transl_table=11 CP040687.1 Genbank gene 1388294 1388563 . - . ID=gene-IXO1088_006750;Name=IXO1088_006750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006750 CP040687.1 Protein Homology CDS 1388294 1388563 . - 0 ID=cds-QIE15172.1;Parent=gene-IXO1088_006750;Dbxref=NCBI_GP:QIE15172.1;Name=QIE15172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638156.1;locus_tag=IXO1088_006750;product=HPr family phosphocarrier protein;protein_id=QIE15172.1;transl_table=11 CP040687.1 Genbank gene 1388556 1388948 . - . ID=gene-IXO1088_006755;Name=IXO1088_006755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006755 CP040687.1 Protein Homology CDS 1388556 1388948 . - 0 ID=cds-QIE15173.1;Parent=gene-IXO1088_006755;Dbxref=NCBI_GP:QIE15173.1;Name=QIE15173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154797.1;locus_tag=IXO1088_006755;product=PTS fructose IIA subunit family protein;protein_id=QIE15173.1;transl_table=11 CP040687.1 Genbank gene 1389476 1390324 . - . ID=gene-IXO1088_006760;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=IXO1088_006760 CP040687.1 Protein Homology CDS 1389476 1390324 . - 0 ID=cds-QIE17896.1;Parent=gene-IXO1088_006760;Dbxref=NCBI_GP:QIE17896.1;Name=QIE17896.1;gbkey=CDS;gene=rapZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638154.1;locus_tag=IXO1088_006760;product=RNase adapter RapZ;protein_id=QIE17896.1;transl_table=11 CP040687.1 Genbank gene 1390345 1391295 . - . ID=gene-IXO1088_006765;Name=IXO1088_006765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006765 CP040687.1 Protein Homology CDS 1390345 1391295 . - 0 ID=cds-QIE15174.1;Parent=gene-IXO1088_006765;Dbxref=NCBI_GP:QIE15174.1;Name=QIE15174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638153.1;locus_tag=IXO1088_006765;product=HPr kinase/phosphorylase;protein_id=QIE15174.1;transl_table=11 CP040687.1 Genbank gene 1391292 1391750 . - . ID=gene-IXO1088_006770;Name=IXO1088_006770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006770 CP040687.1 Protein Homology CDS 1391292 1391750 . - 0 ID=cds-QIE15175.1;Parent=gene-IXO1088_006770;Dbxref=NCBI_GP:QIE15175.1;Name=QIE15175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638152.1;locus_tag=IXO1088_006770;product=PTS sugar transporter subunit IIA;protein_id=QIE15175.1;transl_table=11 CP040687.1 Genbank gene 1391772 1392089 . - . ID=gene-IXO1088_006775;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=IXO1088_006775 CP040687.1 Protein Homology CDS 1391772 1392089 . - 0 ID=cds-QIE15176.1;Parent=gene-IXO1088_006775;Dbxref=NCBI_GP:QIE15176.1;Name=QIE15176.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638151.1;locus_tag=IXO1088_006775;product=ribosome-associated translation inhibitor RaiA;protein_id=QIE15176.1;transl_table=11 CP040687.1 Genbank gene 1392177 1393616 . - . ID=gene-IXO1088_006780;Name=IXO1088_006780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006780 CP040687.1 Protein Homology CDS 1392177 1393616 . - 0 ID=cds-QIE15177.1;Parent=gene-IXO1088_006780;Dbxref=NCBI_GP:QIE15177.1;Name=QIE15177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638150.1;locus_tag=IXO1088_006780;product=RNA polymerase factor sigma-54;protein_id=QIE15177.1;transl_table=11 CP040687.1 Genbank gene 1393657 1394376 . - . ID=gene-IXO1088_006785;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=IXO1088_006785 CP040687.1 Protein Homology CDS 1393657 1394376 . - 0 ID=cds-QIE15178.1;Parent=gene-IXO1088_006785;Dbxref=NCBI_GP:QIE15178.1;Name=QIE15178.1;gbkey=CDS;gene=lptB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638149.1;locus_tag=IXO1088_006785;product=LPS export ABC transporter ATP-binding protein;protein_id=QIE15178.1;transl_table=11 CP040687.1 Genbank gene 1394376 1394924 . - . ID=gene-IXO1088_006790;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=IXO1088_006790 CP040687.1 Protein Homology CDS 1394376 1394924 . - 0 ID=cds-QIE15179.1;Parent=gene-IXO1088_006790;Dbxref=NCBI_GP:QIE15179.1;Name=QIE15179.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638148.1;locus_tag=IXO1088_006790;product=lipopolysaccharide transport periplasmic protein LptA;protein_id=QIE15179.1;transl_table=11 CP040687.1 Genbank gene 1394902 1395477 . - . ID=gene-IXO1088_006795;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=IXO1088_006795 CP040687.1 Protein Homology CDS 1394902 1395477 . - 0 ID=cds-QIE15180.1;Parent=gene-IXO1088_006795;Dbxref=NCBI_GP:QIE15180.1;Name=QIE15180.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638147.1;locus_tag=IXO1088_006795;product=LPS export ABC transporter periplasmic protein LptC;protein_id=QIE15180.1;transl_table=11 CP040687.1 Genbank gene 1395474 1396022 . - . ID=gene-IXO1088_006800;Name=IXO1088_006800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006800 CP040687.1 Protein Homology CDS 1395474 1396022 . - 0 ID=cds-QIE15181.1;Parent=gene-IXO1088_006800;Dbxref=NCBI_GP:QIE15181.1;Name=QIE15181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638146.1;locus_tag=IXO1088_006800;product=phenylphosphate carboxylase subunit delta;protein_id=QIE15181.1;transl_table=11 CP040687.1 Genbank gene 1396071 1397072 . - . ID=gene-IXO1088_006805;Name=IXO1088_006805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006805 CP040687.1 Protein Homology CDS 1396071 1397072 . - 0 ID=cds-QIE15182.1;Parent=gene-IXO1088_006805;Dbxref=NCBI_GP:QIE15182.1;Name=QIE15182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638145.1;locus_tag=IXO1088_006805;product=KpsF/GutQ family sugar-phosphate isomerase;protein_id=QIE15182.1;transl_table=11 CP040687.1 Genbank gene 1397127 1397354 . + . ID=gene-IXO1088_006810;Name=IXO1088_006810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006810 CP040687.1 Protein Homology CDS 1397127 1397354 . + 0 ID=cds-QIE15183.1;Parent=gene-IXO1088_006810;Dbxref=NCBI_GP:QIE15183.1;Name=QIE15183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016905061.1;locus_tag=IXO1088_006810;product=BolA/IbaG family iron-sulfur metabolism protein;protein_id=QIE15183.1;transl_table=11 CP040687.1 Genbank gene 1397593 1398867 . + . ID=gene-IXO1088_006815;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=IXO1088_006815 CP040687.1 Protein Homology CDS 1397593 1398867 . + 0 ID=cds-QIE15184.1;Parent=gene-IXO1088_006815;Dbxref=NCBI_GP:QIE15184.1;Name=QIE15184.1;gbkey=CDS;gene=murA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638143.1;locus_tag=IXO1088_006815;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=QIE15184.1;transl_table=11 CP040687.1 Genbank gene 1398864 1399187 . + . ID=gene-IXO1088_006820;Name=IXO1088_006820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006820 CP040687.1 Protein Homology CDS 1398864 1399187 . + 0 ID=cds-QIE15185.1;Parent=gene-IXO1088_006820;Dbxref=NCBI_GP:QIE15185.1;Name=QIE15185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638142.1;locus_tag=IXO1088_006820;product=EF-hand domain-containing protein;protein_id=QIE15185.1;transl_table=11 CP040687.1 Genbank gene 1400276 1400959 . - . ID=gene-IXO1088_006825;Name=IXO1088_006825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006825 CP040687.1 Protein Homology CDS 1400276 1400959 . - 0 ID=cds-QIE15186.1;Parent=gene-IXO1088_006825;Dbxref=NCBI_GP:QIE15186.1;Name=QIE15186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638141.2;locus_tag=IXO1088_006825;product=DUF3108 domain-containing protein;protein_id=QIE15186.1;transl_table=11 CP040687.1 Genbank gene 1400963 1401790 . - . ID=gene-IXO1088_006830;Name=IXO1088_006830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006830 CP040687.1 Protein Homology CDS 1400963 1401790 . - 0 ID=cds-QIE15187.1;Parent=gene-IXO1088_006830;Dbxref=NCBI_GP:QIE15187.1;Name=QIE15187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638140.2;locus_tag=IXO1088_006830;product=DUF3108 domain-containing protein;protein_id=QIE15187.1;transl_table=11 CP040687.1 Genbank gene 1401856 1402524 . - . ID=gene-IXO1088_006835;Name=IXO1088_006835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006835 CP040687.1 Protein Homology CDS 1401856 1402524 . - 0 ID=cds-QIE15188.1;Parent=gene-IXO1088_006835;Dbxref=NCBI_GP:QIE15188.1;Name=QIE15188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258114.1;locus_tag=IXO1088_006835;product=phosphoribosylglycinamide formyltransferase;protein_id=QIE15188.1;transl_table=11 CP040687.1 Genbank gene 1402511 1403128 . - . ID=gene-IXO1088_006840;Name=IXO1088_006840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006840 CP040687.1 Protein Homology CDS 1402511 1403128 . - 0 ID=cds-QIE15189.1;Parent=gene-IXO1088_006840;Dbxref=NCBI_GP:QIE15189.1;Name=QIE15189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157703.1;locus_tag=IXO1088_006840;product=DUF2238 domain-containing protein;protein_id=QIE15189.1;transl_table=11 CP040687.1 Genbank gene 1403151 1403612 . - . ID=gene-IXO1088_006845;Name=IXO1088_006845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006845 CP040687.1 Protein Homology CDS 1403151 1403612 . - 0 ID=cds-QIE15190.1;Parent=gene-IXO1088_006845;Dbxref=NCBI_GP:QIE15190.1;Name=QIE15190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258116.1;locus_tag=IXO1088_006845;product=hypothetical protein;protein_id=QIE15190.1;transl_table=11 CP040687.1 Genbank gene 1403626 1404684 . - . ID=gene-IXO1088_006850;Name=IXO1088_006850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006850 CP040687.1 Protein Homology CDS 1403626 1404684 . - 0 ID=cds-QIE15191.1;Parent=gene-IXO1088_006850;Dbxref=NCBI_GP:QIE15191.1;Name=QIE15191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638137.2;locus_tag=IXO1088_006850;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=QIE15191.1;transl_table=11 CP040687.1 Genbank gene 1404731 1405894 . + . ID=gene-IXO1088_006855;Name=IXO1088_006855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006855 CP040687.1 Protein Homology CDS 1404731 1405894 . + 0 ID=cds-QIE15192.1;Parent=gene-IXO1088_006855;Dbxref=NCBI_GP:QIE15192.1;Name=QIE15192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638136.1;locus_tag=IXO1088_006855;product=DUF2066 domain-containing protein;protein_id=QIE15192.1;transl_table=11 CP040687.1 Genbank gene 1405891 1407057 . + . ID=gene-IXO1088_006860;Name=IXO1088_006860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006860 CP040687.1 Protein Homology CDS 1405891 1407057 . + 0 ID=cds-QIE15193.1;Parent=gene-IXO1088_006860;Dbxref=NCBI_GP:QIE15193.1;Name=QIE15193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157699.1;locus_tag=IXO1088_006860;product=AI-2E family transporter;protein_id=QIE15193.1;transl_table=11 CP040687.1 Genbank gene 1407054 1407755 . + . ID=gene-IXO1088_006865;Name=IXO1088_006865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006865 CP040687.1 Protein Homology CDS 1407054 1407755 . + 0 ID=cds-QIE15194.1;Parent=gene-IXO1088_006865;Dbxref=NCBI_GP:QIE15194.1;Name=QIE15194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369247.1;locus_tag=IXO1088_006865;product=DnaA regulatory inactivator Hda;protein_id=QIE15194.1;transl_table=11 CP040687.1 Genbank gene 1407922 1408632 . - . ID=gene-IXO1088_006870;Name=IXO1088_006870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006870 CP040687.1 Protein Homology CDS 1407922 1408632 . - 0 ID=cds-QIE15195.1;Parent=gene-IXO1088_006870;Dbxref=NCBI_GP:QIE15195.1;Name=QIE15195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369254.1;locus_tag=IXO1088_006870;product=nucleotidyltransferase family protein;protein_id=QIE15195.1;transl_table=11 CP040687.1 Genbank gene 1408629 1409648 . - . ID=gene-IXO1088_006875;Name=IXO1088_006875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006875 CP040687.1 Protein Homology CDS 1408629 1409648 . - 0 ID=cds-QIE15196.1;Parent=gene-IXO1088_006875;Dbxref=NCBI_GP:QIE15196.1;Name=QIE15196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116339.1;locus_tag=IXO1088_006875;product=aminoglycoside phosphotransferase;protein_id=QIE15196.1;transl_table=11 CP040687.1 Genbank gene 1409706 1409978 . - . ID=gene-IXO1088_006880;Name=IXO1088_006880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006880 CP040687.1 Protein Homology CDS 1409706 1409978 . - 0 ID=cds-QIE15197.1;Parent=gene-IXO1088_006880;Dbxref=NCBI_GP:QIE15197.1;Name=QIE15197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638131.1;locus_tag=IXO1088_006880;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=QIE15197.1;transl_table=11 CP040687.1 Genbank gene 1410203 1411261 . + . ID=gene-IXO1088_006885;Name=IXO1088_006885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006885 CP040687.1 Protein Homology CDS 1410203 1411261 . + 0 ID=cds-QIE15198.1;Parent=gene-IXO1088_006885;Dbxref=NCBI_GP:QIE15198.1;Name=QIE15198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408472.1;locus_tag=IXO1088_006885;product=IS630 family transposase;protein_id=QIE15198.1;transl_table=11 CP040687.1 Genbank gene 1411581 1413074 . - . ID=gene-IXO1088_006890;Name=IXO1088_006890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006890 CP040687.1 Protein Homology CDS 1411581 1413074 . - 0 ID=cds-QIE15199.1;Parent=gene-IXO1088_006890;Dbxref=NCBI_GP:QIE15199.1;Name=QIE15199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638130.1;locus_tag=IXO1088_006890;product=M20/M25/M40 family metallo-hydrolase;protein_id=QIE15199.1;transl_table=11 CP040687.1 Genbank gene 1413274 1413606 . + . ID=gene-IXO1088_006895;Name=IXO1088_006895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006895 CP040687.1 Protein Homology CDS 1413274 1413606 . + 0 ID=cds-QIE15200.1;Parent=gene-IXO1088_006895;Dbxref=NCBI_GP:QIE15200.1;Name=QIE15200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638129.1;locus_tag=IXO1088_006895;product=helix-hairpin-helix domain-containing protein;protein_id=QIE15200.1;transl_table=11 CP040687.1 Genbank pseudogene 1413938 1415164 . - . ID=gene-IXO1088_006900;Name=IXO1088_006900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_006900;pseudo=true CP040687.1 Protein Homology CDS 1413938 1415164 . - 0 ID=cds-IXO1088_006900;Parent=gene-IXO1088_006900;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611570.1;locus_tag=IXO1088_006900;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1415309 1415734 . + . ID=gene-IXO1088_006905;Name=IXO1088_006905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006905 CP040687.1 Protein Homology CDS 1415309 1415734 . + 0 ID=cds-QIE15201.1;Parent=gene-IXO1088_006905;Dbxref=NCBI_GP:QIE15201.1;Name=QIE15201.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF05962.9;locus_tag=IXO1088_006905;product=HutD family protein;protein_id=QIE15201.1;transl_table=11 CP040687.1 Genbank gene 1415829 1416797 . - . ID=gene-IXO1088_006910;Name=IXO1088_006910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006910 CP040687.1 Protein Homology CDS 1415829 1416797 . - 0 ID=cds-QIE15202.1;Parent=gene-IXO1088_006910;Dbxref=NCBI_GP:QIE15202.1;Name=QIE15202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_006910;product=IS5-like element ISXo1 family transposase;protein_id=QIE15202.1;transl_table=11 CP040687.1 Genbank pseudogene 1417027 1417386 . + . ID=gene-IXO1088_006915;Name=IXO1088_006915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_006915;pseudo=true CP040687.1 Protein Homology CDS 1417027 1417386 . + 0 ID=cds-IXO1088_006915;Parent=gene-IXO1088_006915;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157692.1;locus_tag=IXO1088_006915;product=HutD family protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1417469 1417909 . - . ID=gene-IXO1088_006920;Name=IXO1088_006920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_006920;pseudo=true CP040687.1 Protein Homology CDS 1417469 1417909 . - 0 ID=cds-IXO1088_006920;Parent=gene-IXO1088_006920;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1088_006920;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1418076 1419041 . + . ID=gene-IXO1088_006925;Name=IXO1088_006925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_006925;pseudo=true CP040687.1 Protein Homology CDS 1418076 1419041 . + 0 ID=cds-IXO1088_006925;Parent=gene-IXO1088_006925;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_006925;product=IS1595 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1419090 1419161 . - . ID=gene-IXO1088_006930;Name=IXO1088_006930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_006930;pseudo=true CP040687.1 Protein Homology CDS 1419090 1419161 . - 0 ID=cds-IXO1088_006930;Parent=gene-IXO1088_006930;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304251.1;locus_tag=IXO1088_006930;product=glycoside hydrolase family 16 protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1419202 1419351 . + . ID=gene-IXO1088_006935;Name=IXO1088_006935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_006935;pseudo=true CP040687.1 Protein Homology CDS 1419202 1419351 . + 0 ID=cds-IXO1088_006935;Parent=gene-IXO1088_006935;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_006935;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1419539 1421122 . - . ID=gene-IXO1088_006940;Name=IXO1088_006940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006940 CP040687.1 Protein Homology CDS 1419539 1421122 . - 0 ID=cds-QIE15203.1;Parent=gene-IXO1088_006940;Dbxref=NCBI_GP:QIE15203.1;Name=QIE15203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304880.1;locus_tag=IXO1088_006940;product=alpha-N-arabinofuranosidase;protein_id=QIE15203.1;transl_table=11 CP040687.1 Genbank gene 1421370 1422419 . + . ID=gene-IXO1088_006945;Name=IXO1088_006945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006945 CP040687.1 Protein Homology CDS 1421370 1422419 . + 0 ID=cds-QIE15204.1;Parent=gene-IXO1088_006945;Dbxref=NCBI_GP:QIE15204.1;Name=QIE15204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302956.1;locus_tag=IXO1088_006945;product=galactose mutarotase;protein_id=QIE15204.1;transl_table=11 CP040687.1 Genbank gene 1422707 1423498 . - . ID=gene-IXO1088_006950;Name=IXO1088_006950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006950 CP040687.1 Protein Homology CDS 1422707 1423498 . - 0 ID=cds-QIE15205.1;Parent=gene-IXO1088_006950;Dbxref=NCBI_GP:QIE15205.1;Name=QIE15205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636567.1;locus_tag=IXO1088_006950;product=inner membrane protein YpjD;protein_id=QIE15205.1;transl_table=11 CP040687.1 Genbank gene 1423527 1423736 . + . ID=gene-IXO1088_006955;Name=IXO1088_006955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006955 CP040687.1 Protein Homology CDS 1423527 1423736 . + 0 ID=cds-QIE17897.1;Parent=gene-IXO1088_006955;Dbxref=NCBI_GP:QIE17897.1;Name=QIE17897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017309145.1;locus_tag=IXO1088_006955;product=hypothetical protein;protein_id=QIE17897.1;transl_table=11 CP040687.1 Genbank gene 1423784 1424749 . + . ID=gene-IXO1088_006960;Name=IXO1088_006960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006960 CP040687.1 Protein Homology CDS 1423784 1424749 . + 0 ID=cds-QIE15206.1;Parent=gene-IXO1088_006960;Dbxref=NCBI_GP:QIE15206.1;Name=QIE15206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_006960;product=IS1595-like element ISXo5 family transposase;protein_id=QIE15206.1;transl_table=11 CP040687.1 Genbank gene 1425051 1426427 . + . ID=gene-IXO1088_006965;Name=IXO1088_006965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006965 CP040687.1 Protein Homology CDS 1425051 1426427 . + 0 ID=cds-QIE15207.1;Parent=gene-IXO1088_006965;Dbxref=NCBI_GP:QIE15207.1;Name=QIE15207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636568.1;locus_tag=IXO1088_006965;product=signal recognition particle protein;protein_id=QIE15207.1;transl_table=11 CP040687.1 Genbank pseudogene 1426453 1427739 . + . ID=gene-IXO1088_006970;Name=IXO1088_006970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_006970;pseudo=true CP040687.1 Protein Homology CDS 1426453 1427739 . + 0 ID=cds-IXO1088_006970;Parent=gene-IXO1088_006970;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636569.1;locus_tag=IXO1088_006970;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1427800 1427875 . + . ID=gene-IXO1088_006975;Name=IXO1088_006975;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_006975 CP040687.1 cmsearch ncRNA 1427800 1427875 . + . ID=rna-IXO1088_006975;Parent=gene-IXO1088_006975;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_006975;product=sX9 sRNA CP040687.1 cmsearch exon 1427800 1427875 . + . ID=exon-IXO1088_006975-1;Parent=rna-IXO1088_006975;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_006975;product=sX9 sRNA CP040687.1 Genbank gene 1428000 1429070 . + . ID=gene-IXO1088_006980;Name=IXO1088_006980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006980 CP040687.1 Protein Homology CDS 1428000 1429070 . + 0 ID=cds-QIE15208.1;Parent=gene-IXO1088_006980;Dbxref=NCBI_GP:QIE15208.1;Name=QIE15208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484227.1;locus_tag=IXO1088_006980;product=nitronate monooxygenase;protein_id=QIE15208.1;transl_table=11 CP040687.1 Genbank gene 1429061 1429858 . + . ID=gene-IXO1088_006985;Name=IXO1088_006985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_006985 CP040687.1 Protein Homology CDS 1429061 1429858 . + 0 ID=cds-QIE15209.1;Parent=gene-IXO1088_006985;Dbxref=NCBI_GP:QIE15209.1;Name=QIE15209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636572.1;locus_tag=IXO1088_006985;product=hypothetical protein;protein_id=QIE15209.1;transl_table=11 CP040687.1 Genbank gene 1429968 1430225 . + . ID=gene-IXO1088_006990;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=IXO1088_006990 CP040687.1 Protein Homology CDS 1429968 1430225 . + 0 ID=cds-QIE15210.1;Parent=gene-IXO1088_006990;Dbxref=NCBI_GP:QIE15210.1;Name=QIE15210.1;gbkey=CDS;gene=rpsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636573.1;locus_tag=IXO1088_006990;product=30S ribosomal protein S16;protein_id=QIE15210.1;transl_table=11 CP040687.1 Genbank gene 1430269 1430781 . + . ID=gene-IXO1088_006995;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=IXO1088_006995 CP040687.1 Protein Homology CDS 1430269 1430781 . + 0 ID=cds-QIE15211.1;Parent=gene-IXO1088_006995;Dbxref=NCBI_GP:QIE15211.1;Name=QIE15211.1;gbkey=CDS;gene=rimM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636574.1;locus_tag=IXO1088_006995;product=ribosome maturation factor RimM;protein_id=QIE15211.1;transl_table=11 CP040687.1 Genbank gene 1430854 1431633 . + . ID=gene-IXO1088_007000;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=IXO1088_007000 CP040687.1 Protein Homology CDS 1430854 1431633 . + 0 ID=cds-QIE15212.1;Parent=gene-IXO1088_007000;Dbxref=NCBI_GP:QIE15212.1;Name=QIE15212.1;gbkey=CDS;gene=trmD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407910.1;locus_tag=IXO1088_007000;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=QIE15212.1;transl_table=11 CP040687.1 Genbank gene 1431757 1432164 . + . ID=gene-IXO1088_007005;Name=IXO1088_007005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007005 CP040687.1 Protein Homology CDS 1431757 1432164 . + 0 ID=cds-QIE15213.1;Parent=gene-IXO1088_007005;Dbxref=NCBI_GP:QIE15213.1;Name=QIE15213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003470862.1;locus_tag=IXO1088_007005;product=50S ribosomal protein L19;protein_id=QIE15213.1;transl_table=11 CP040687.1 Genbank gene 1432556 1432632 . - . ID=gene-IXO1088_007010;Name=IXO1088_007010;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_007010 CP040687.1 cmsearch ncRNA 1432556 1432632 . - . ID=rna-IXO1088_007010;Parent=gene-IXO1088_007010;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_007010;product=sX9 sRNA CP040687.1 cmsearch exon 1432556 1432632 . - . ID=exon-IXO1088_007010-1;Parent=rna-IXO1088_007010;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_007010;product=sX9 sRNA CP040687.1 Genbank gene 1432790 1434280 . - . ID=gene-IXO1088_007015;Name=IXO1088_007015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007015 CP040687.1 Protein Homology CDS 1432790 1434280 . - 0 ID=cds-QIE15214.1;Parent=gene-IXO1088_007015;Dbxref=NCBI_GP:QIE15214.1;Name=QIE15214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571123.1;locus_tag=IXO1088_007015;product=MATE family efflux transporter;protein_id=QIE15214.1;transl_table=11 CP040687.1 Genbank gene 1434621 1435028 . + . ID=gene-IXO1088_007020;Name=IXO1088_007020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007020 CP040687.1 Protein Homology CDS 1434621 1435028 . + 0 ID=cds-QIE15215.1;Parent=gene-IXO1088_007020;Dbxref=NCBI_GP:QIE15215.1;Name=QIE15215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504229.1;locus_tag=IXO1088_007020;product=RNA-binding S4 domain-containing protein;protein_id=QIE15215.1;transl_table=11 CP040687.1 Genbank pseudogene 1435163 1435330 . + . ID=gene-IXO1088_007025;Name=IXO1088_007025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007025;pseudo=true CP040687.1 Protein Homology CDS 1435163 1435330 . + 0 ID=cds-IXO1088_007025;Parent=gene-IXO1088_007025;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257114.1;locus_tag=IXO1088_007025;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1435319 1435411 . - . ID=gene-IXO1088_007030;Name=IXO1088_007030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007030;pseudo=true CP040687.1 Protein Homology CDS 1435319 1435411 . - 0 ID=cds-IXO1088_007030;Parent=gene-IXO1088_007030;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257538.1;locus_tag=IXO1088_007030;product=alcohol dehydrogenase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1435448 1436662 . + . ID=gene-IXO1088_007035;Name=IXO1088_007035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007035 CP040687.1 Protein Homology CDS 1435448 1436662 . + 0 ID=cds-QIE15216.1;Parent=gene-IXO1088_007035;Dbxref=NCBI_GP:QIE15216.1;Name=QIE15216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1088_007035;product=IS4-like element ISXo14 family transposase;protein_id=QIE15216.1;transl_table=11 CP040687.1 Genbank pseudogene 1436682 1437921 . + . ID=gene-IXO1088_007040;Name=IXO1088_007040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007040;pseudo=true CP040687.1 Protein Homology CDS 1436682 1437921 . + 0 ID=cds-IXO1088_007040;Parent=gene-IXO1088_007040;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_007040;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1437882 1438022 . + . ID=gene-IXO1088_007045;Name=IXO1088_007045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007045;pseudo=true CP040687.1 Protein Homology CDS 1437882 1438022 . + 0 ID=cds-IXO1088_007045;Parent=gene-IXO1088_007045;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502976.1;locus_tag=IXO1088_007045;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1437988 1438263 . - . ID=gene-IXO1088_007050;Name=IXO1088_007050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007050 CP040687.1 Protein Homology CDS 1437988 1438263 . - 0 ID=cds-QIE15217.1;Parent=gene-IXO1088_007050;Dbxref=NCBI_GP:QIE15217.1;Name=QIE15217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445759.1;locus_tag=IXO1088_007050;product=glutathione transferase;protein_id=QIE15217.1;transl_table=11 CP040687.1 Genbank gene 1438293 1438598 . - . ID=gene-IXO1088_007055;Name=IXO1088_007055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007055 CP040687.1 Protein Homology CDS 1438293 1438598 . - 0 ID=cds-QIE15218.1;Parent=gene-IXO1088_007055;Dbxref=NCBI_GP:QIE15218.1;Name=QIE15218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258151.1;locus_tag=IXO1088_007055;product=GIY-YIG nuclease family protein;protein_id=QIE15218.1;transl_table=11 CP040687.1 Genbank gene 1439044 1441629 . + . ID=gene-IXO1088_007060;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=IXO1088_007060 CP040687.1 Protein Homology CDS 1439044 1441629 . + 0 ID=cds-QIE15219.1;Parent=gene-IXO1088_007060;Dbxref=NCBI_GP:QIE15219.1;Name=QIE15219.1;gbkey=CDS;gene=clpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002807758.1;locus_tag=IXO1088_007060;product=ATP-dependent chaperone ClpB;protein_id=QIE15219.1;transl_table=11 CP040687.1 Genbank gene 1441754 1442665 . + . ID=gene-IXO1088_007065;Name=IXO1088_007065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007065 CP040687.1 Protein Homology CDS 1441754 1442665 . + 0 ID=cds-QIE17898.1;Parent=gene-IXO1088_007065;Dbxref=NCBI_GP:QIE17898.1;Name=QIE17898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407917.1;locus_tag=IXO1088_007065;product=hypothetical protein;protein_id=QIE17898.1;transl_table=11 CP040687.1 Genbank gene 1442696 1442845 . + . ID=gene-IXO1088_007070;Name=IXO1088_007070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007070 CP040687.1 Protein Homology CDS 1442696 1442845 . + 0 ID=cds-QIE15220.1;Parent=gene-IXO1088_007070;Dbxref=NCBI_GP:QIE15220.1;Name=QIE15220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013519428.1;locus_tag=IXO1088_007070;product=hypothetical protein;protein_id=QIE15220.1;transl_table=11 CP040687.1 Genbank gene 1442940 1444041 . - . ID=gene-IXO1088_007075;Name=IXO1088_007075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007075 CP040687.1 Protein Homology CDS 1443791 1444041 . - 0 ID=cds-QIE15221.1;Parent=gene-IXO1088_007075;Dbxref=NCBI_GP:QIE15221.1;Name=QIE15221.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1088_007075;product=IS3 family transposase;protein_id=QIE15221.1;transl_table=11 CP040687.1 Protein Homology CDS 1442940 1443792 . - 1 ID=cds-QIE15221.1;Parent=gene-IXO1088_007075;Dbxref=NCBI_GP:QIE15221.1;Name=QIE15221.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1088_007075;product=IS3 family transposase;protein_id=QIE15221.1;transl_table=11 CP040687.1 Genbank pseudogene 1444010 1444123 . + . ID=gene-IXO1088_007080;Name=IXO1088_007080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007080;pseudo=true CP040687.1 Protein Homology CDS 1444010 1444123 . + 0 ID=cds-IXO1088_007080;Parent=gene-IXO1088_007080;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166331.1;locus_tag=IXO1088_007080;product=carboxypeptidase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1444105 1444890 . + . ID=gene-IXO1088_007085;Name=IXO1088_007085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007085;pseudo=true CP040687.1 Protein Homology CDS 1444105 1444890 . + 0 ID=cds-IXO1088_007085;Parent=gene-IXO1088_007085;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1088_007085;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1444901 1445251 . + . ID=gene-IXO1088_007090;Name=IXO1088_007090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007090;pseudo=true CP040687.1 Protein Homology CDS 1444901 1445251 . + 0 ID=cds-IXO1088_007090;Parent=gene-IXO1088_007090;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503409.1;locus_tag=IXO1088_007090;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1445252 1445392 . + . ID=gene-IXO1088_007095;Name=IXO1088_007095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007095;pseudo=true CP040687.1 Protein Homology CDS 1445252 1445392 . + 0 ID=cds-IXO1088_007095;Parent=gene-IXO1088_007095;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=IXO1088_007095;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 cmsearch riboswitch 1445559 1445784 . + . ID=id-CP040687.1:1445559..1445784;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP040687.1 Genbank gene 1445901 1447778 . + . ID=gene-IXO1088_007100;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=IXO1088_007100 CP040687.1 Protein Homology CDS 1445901 1447778 . + 0 ID=cds-QIE15222.1;Parent=gene-IXO1088_007100;Dbxref=NCBI_GP:QIE15222.1;Name=QIE15222.1;gbkey=CDS;gene=btuB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504220.1;locus_tag=IXO1088_007100;product=TonB-dependent vitamin B12 receptor;protein_id=QIE15222.1;transl_table=11 CP040687.1 Genbank gene 1447840 1447914 . + . ID=gene-IXO1088_007105;Name=IXO1088_007105;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_007105 CP040687.1 cmsearch ncRNA 1447840 1447914 . + . ID=rna-IXO1088_007105;Parent=gene-IXO1088_007105;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_007105;product=sX9 sRNA CP040687.1 cmsearch exon 1447840 1447914 . + . ID=exon-IXO1088_007105-1;Parent=rna-IXO1088_007105;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_007105;product=sX9 sRNA CP040687.1 Genbank pseudogene 1448005 1449324 . - . ID=gene-IXO1088_007110;Name=IXO1088_007110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007110;pseudo=true CP040687.1 Protein Homology CDS 1448005 1449324 . - 0 ID=cds-IXO1088_007110;Parent=gene-IXO1088_007110;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_007110;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1449551 1450144 . + . ID=gene-IXO1088_007115;Name=IXO1088_007115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007115 CP040687.1 Protein Homology CDS 1449551 1450144 . + 0 ID=cds-QIE15223.1;Parent=gene-IXO1088_007115;Dbxref=NCBI_GP:QIE15223.1;Name=QIE15223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304846.1;locus_tag=IXO1088_007115;product=hypothetical protein;protein_id=QIE15223.1;transl_table=11 CP040687.1 Genbank gene 1450144 1450743 . + . ID=gene-IXO1088_007120;Name=IXO1088_007120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007120 CP040687.1 Protein Homology CDS 1450144 1450743 . + 0 ID=cds-QIE17899.1;Parent=gene-IXO1088_007120;Dbxref=NCBI_GP:QIE17899.1;Name=QIE17899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007963715.1;locus_tag=IXO1088_007120;product=hypothetical protein;protein_id=QIE17899.1;transl_table=11 CP040687.1 Genbank gene 1450740 1451351 . + . ID=gene-IXO1088_007125;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=IXO1088_007125 CP040687.1 Protein Homology CDS 1450740 1451351 . + 0 ID=cds-QIE15224.1;Parent=gene-IXO1088_007125;Dbxref=NCBI_GP:QIE15224.1;Name=QIE15224.1;gbkey=CDS;gene=cobO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638411.1;locus_tag=IXO1088_007125;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=QIE15224.1;transl_table=11 CP040687.1 Genbank pseudogene 1451424 1451877 . + . ID=gene-IXO1088_007130;Name=IXO1088_007130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007130;pseudo=true CP040687.1 Protein Homology CDS 1451424 1451877 . + 0 ID=cds-IXO1088_007130;Parent=gene-IXO1088_007130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504215.1;locus_tag=IXO1088_007130;product=adenosylcobinamide kinase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1451865 1452386 . + . ID=gene-IXO1088_007135;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=IXO1088_007135 CP040687.1 Protein Homology CDS 1451865 1452386 . + 0 ID=cds-QIE15225.1;Parent=gene-IXO1088_007135;Dbxref=NCBI_GP:QIE15225.1;Name=QIE15225.1;gbkey=CDS;gene=cobU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638407.1;locus_tag=IXO1088_007135;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=QIE15225.1;transl_table=11 CP040687.1 Genbank gene 1452383 1453429 . + . ID=gene-IXO1088_007140;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=IXO1088_007140 CP040687.1 Protein Homology CDS 1452383 1453429 . + 0 ID=cds-QIE15226.1;Parent=gene-IXO1088_007140;Dbxref=NCBI_GP:QIE15226.1;Name=QIE15226.1;gbkey=CDS;gene=cobT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638406.1;locus_tag=IXO1088_007140;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=QIE15226.1;transl_table=11 CP040687.1 Genbank gene 1453426 1454016 . + . ID=gene-IXO1088_007145;Name=IXO1088_007145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007145 CP040687.1 Protein Homology CDS 1453426 1454016 . + 0 ID=cds-QIE15227.1;Parent=gene-IXO1088_007145;Dbxref=NCBI_GP:QIE15227.1;Name=QIE15227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258165.1;locus_tag=IXO1088_007145;product=histidine phosphatase family protein;protein_id=QIE15227.1;transl_table=11 CP040687.1 Genbank gene 1454013 1454747 . + . ID=gene-IXO1088_007150;Name=IXO1088_007150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007150 CP040687.1 Protein Homology CDS 1454013 1454747 . + 0 ID=cds-QIE17900.1;Parent=gene-IXO1088_007150;Dbxref=NCBI_GP:QIE17900.1;Name=QIE17900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913602.1;locus_tag=IXO1088_007150;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=QIE17900.1;transl_table=11 CP040687.1 Genbank gene 1454841 1454917 . + . ID=gene-IXO1088_007155;Name=IXO1088_007155;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_007155 CP040687.1 cmsearch ncRNA 1454841 1454917 . + . ID=rna-IXO1088_007155;Parent=gene-IXO1088_007155;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_007155;product=sX9 sRNA CP040687.1 cmsearch exon 1454841 1454917 . + . ID=exon-IXO1088_007155-1;Parent=rna-IXO1088_007155;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_007155;product=sX9 sRNA CP040687.1 Genbank gene 1454943 1455899 . - . ID=gene-IXO1088_007160;Name=IXO1088_007160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007160 CP040687.1 Protein Homology CDS 1454943 1455899 . - 0 ID=cds-QIE15228.1;Parent=gene-IXO1088_007160;Dbxref=NCBI_GP:QIE15228.1;Name=QIE15228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=IXO1088_007160;product=IS30-like element IS1112a family transposase;protein_id=QIE15228.1;transl_table=11 CP040687.1 Genbank gene 1455974 1457176 . - . ID=gene-IXO1088_007165;Name=IXO1088_007165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007165 CP040687.1 Protein Homology CDS 1455974 1457176 . - 0 ID=cds-QIE15229.1;Parent=gene-IXO1088_007165;Dbxref=NCBI_GP:QIE15229.1;Name=QIE15229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305442.1;locus_tag=IXO1088_007165;product=type III PLP-dependent enzyme;protein_id=QIE15229.1;transl_table=11 CP040687.1 Genbank gene 1457173 1458942 . - . ID=gene-IXO1088_007170;Name=IXO1088_007170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007170 CP040687.1 Protein Homology CDS 1457173 1458942 . - 0 ID=cds-QIE15230.1;Parent=gene-IXO1088_007170;Dbxref=NCBI_GP:QIE15230.1;Name=QIE15230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638401.1;locus_tag=IXO1088_007170;product=iron transporter;protein_id=QIE15230.1;transl_table=11 CP040687.1 Genbank gene 1458920 1460116 . - . ID=gene-IXO1088_007175;Name=IXO1088_007175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007175 CP040687.1 Protein Homology CDS 1458920 1460116 . - 0 ID=cds-QIE15231.1;Parent=gene-IXO1088_007175;Dbxref=NCBI_GP:QIE15231.1;Name=QIE15231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638400.1;locus_tag=IXO1088_007175;product=MFS transporter;protein_id=QIE15231.1;transl_table=11 CP040687.1 Genbank gene 1460113 1461915 . - . ID=gene-IXO1088_007180;Name=IXO1088_007180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007180 CP040687.1 Protein Homology CDS 1460113 1461915 . - 0 ID=cds-QIE15232.1;Parent=gene-IXO1088_007180;Dbxref=NCBI_GP:QIE15232.1;Name=QIE15232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571067.1;locus_tag=IXO1088_007180;product=IucA/IucC family siderophore biosynthesis protein;protein_id=QIE15232.1;transl_table=11 CP040687.1 Genbank gene 1461912 1463138 . - . ID=gene-IXO1088_007185;Name=IXO1088_007185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007185 CP040687.1 Protein Homology CDS 1461912 1463138 . - 0 ID=cds-QIE15233.1;Parent=gene-IXO1088_007185;Dbxref=NCBI_GP:QIE15233.1;Name=QIE15233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452407.1;locus_tag=IXO1088_007185;product=siderophore biosynthesis protein PvsA;protein_id=QIE15233.1;transl_table=11 CP040687.1 Genbank gene 1463374 1465515 . - . ID=gene-IXO1088_007190;Name=IXO1088_007190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007190 CP040687.1 Protein Homology CDS 1463374 1465515 . - 0 ID=cds-QIE15234.1;Parent=gene-IXO1088_007190;Dbxref=NCBI_GP:QIE15234.1;Name=QIE15234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638397.1;locus_tag=IXO1088_007190;product=TonB-dependent siderophore receptor;protein_id=QIE15234.1;transl_table=11 CP040687.1 Genbank gene 1465516 1466277 . - . ID=gene-IXO1088_007195;Name=IXO1088_007195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007195 CP040687.1 Protein Homology CDS 1465516 1466277 . - 0 ID=cds-QIE15235.1;Parent=gene-IXO1088_007195;Dbxref=NCBI_GP:QIE15235.1;Name=QIE15235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638396.1;locus_tag=IXO1088_007195;product=4-hydroxy-2-oxovalerate aldolase;protein_id=QIE15235.1;transl_table=11 CP040687.1 Genbank pseudogene 1466422 1467523 . + . ID=gene-IXO1088_007200;Name=IXO1088_007200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007200;pseudo=true CP040687.1 Protein Homology CDS 1466422 1467523 . + 0 ID=cds-IXO1088_007200;Parent=gene-IXO1088_007200;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612184.1;locus_tag=IXO1088_007200;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1467687 1469396 . - . ID=gene-IXO1088_007205;Name=IXO1088_007205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007205 CP040687.1 Protein Homology CDS 1467687 1469396 . - 0 ID=cds-QIE15236.1;Parent=gene-IXO1088_007205;Dbxref=NCBI_GP:QIE15236.1;Name=QIE15236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638395.1;locus_tag=IXO1088_007205;product=Kef family K(+) transporter;protein_id=QIE15236.1;transl_table=11 CP040687.1 Genbank pseudogene 1469895 1470348 . + . ID=gene-IXO1088_007210;Name=IXO1088_007210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007210;pseudo=true CP040687.1 Protein Homology CDS 1469895 1470348 . + 0 ID=cds-IXO1088_007210;Parent=gene-IXO1088_007210;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301478.1;locus_tag=IXO1088_007210;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1470495 1472894 . - . ID=gene-IXO1088_007215;Name=IXO1088_007215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007215 CP040687.1 Protein Homology CDS 1470495 1472894 . - 0 ID=cds-QIE15237.1;Parent=gene-IXO1088_007215;Dbxref=NCBI_GP:QIE15237.1;Name=QIE15237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638393.2;locus_tag=IXO1088_007215;product=TonB-dependent receptor;protein_id=QIE15237.1;transl_table=11 CP040687.1 Genbank gene 1473227 1475614 . - . ID=gene-IXO1088_007220;Name=IXO1088_007220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007220 CP040687.1 Protein Homology CDS 1473227 1475614 . - 0 ID=cds-QIE15238.1;Parent=gene-IXO1088_007220;Dbxref=NCBI_GP:QIE15238.1;Name=QIE15238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638392.2;locus_tag=IXO1088_007220;product=TonB-dependent receptor;protein_id=QIE15238.1;transl_table=11 CP040687.1 Genbank gene 1476353 1478740 . - . ID=gene-IXO1088_007225;Name=IXO1088_007225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007225 CP040687.1 Protein Homology CDS 1476353 1478740 . - 0 ID=cds-QIE15239.1;Parent=gene-IXO1088_007225;Dbxref=NCBI_GP:QIE15239.1;Name=QIE15239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156670.1;locus_tag=IXO1088_007225;product=TonB-dependent receptor;protein_id=QIE15239.1;transl_table=11 CP040687.1 Genbank gene 1478916 1480832 . + . ID=gene-IXO1088_007230;Name=IXO1088_007230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007230 CP040687.1 Protein Homology CDS 1478916 1480832 . + 0 ID=cds-QIE15240.1;Parent=gene-IXO1088_007230;Dbxref=NCBI_GP:QIE15240.1;Name=QIE15240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638389.1;locus_tag=IXO1088_007230;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=QIE15240.1;transl_table=11 CP040687.1 Genbank gene 1480907 1480980 . + . ID=gene-IXO1088_007235;Name=IXO1088_007235;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_007235 CP040687.1 cmsearch ncRNA 1480907 1480980 . + . ID=rna-IXO1088_007235;Parent=gene-IXO1088_007235;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_007235;product=sX9 sRNA CP040687.1 cmsearch exon 1480907 1480980 . + . ID=exon-IXO1088_007235-1;Parent=rna-IXO1088_007235;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_007235;product=sX9 sRNA CP040687.1 Genbank gene 1481105 1481530 . + . ID=gene-IXO1088_007240;Name=IXO1088_007240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007240 CP040687.1 Protein Homology CDS 1481105 1481530 . + 0 ID=cds-QIE15241.1;Parent=gene-IXO1088_007240;Dbxref=NCBI_GP:QIE15241.1;Name=QIE15241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407933.1;locus_tag=IXO1088_007240;product=YcxB family protein;protein_id=QIE15241.1;transl_table=11 CP040687.1 Genbank gene 1481554 1482429 . - . ID=gene-IXO1088_007245;Name=IXO1088_007245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007245 CP040687.1 Protein Homology CDS 1481554 1482429 . - 0 ID=cds-QIE15242.1;Parent=gene-IXO1088_007245;Dbxref=NCBI_GP:QIE15242.1;Name=QIE15242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156667.1;locus_tag=IXO1088_007245;product=LysR family transcriptional regulator;protein_id=QIE15242.1;transl_table=11 CP040687.1 Genbank pseudogene 1482530 1483470 . + . ID=gene-IXO1088_007250;Name=bla;gbkey=Gene;gene=bla;gene_biotype=pseudogene;locus_tag=IXO1088_007250;pseudo=true CP040687.1 Protein Homology CDS 1482530 1483470 . + 0 ID=cds-IXO1088_007250;Parent=gene-IXO1088_007250;Note=frameshifted;gbkey=CDS;gene=bla;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258184.1;locus_tag=IXO1088_007250;product=class A beta-lactamase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1483540 1484358 . + . ID=gene-IXO1088_007255;Name=IXO1088_007255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007255 CP040687.1 Protein Homology CDS 1483540 1484358 . + 0 ID=cds-QIE15243.1;Parent=gene-IXO1088_007255;Dbxref=NCBI_GP:QIE15243.1;Name=QIE15243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008578084.1;locus_tag=IXO1088_007255;product=alpha/beta hydrolase;protein_id=QIE15243.1;transl_table=11 CP040687.1 Genbank gene 1484441 1485916 . + . ID=gene-IXO1088_007260;Name=IXO1088_007260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007260 CP040687.1 Protein Homology CDS 1484441 1485916 . + 0 ID=cds-QIE15244.1;Parent=gene-IXO1088_007260;Dbxref=NCBI_GP:QIE15244.1;Name=QIE15244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1088_007260;product=IS5-like element ISXoo5 family transposase;protein_id=QIE15244.1;transl_table=11 CP040687.1 Genbank pseudogene 1486144 1486458 . + . ID=gene-IXO1088_007265;Name=IXO1088_007265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007265;pseudo=true CP040687.1 Protein Homology CDS 1486144 1486458 . + 0 ID=cds-IXO1088_007265;Parent=gene-IXO1088_007265;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302162.1;locus_tag=IXO1088_007265;product=DUF805 domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1486469 1486750 . + . ID=gene-IXO1088_007270;Name=IXO1088_007270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007270 CP040687.1 GeneMarkS-2+ CDS 1486469 1486750 . + 0 ID=cds-QIE15245.1;Parent=gene-IXO1088_007270;Dbxref=NCBI_GP:QIE15245.1;Name=QIE15245.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_007270;product=hypothetical protein;protein_id=QIE15245.1;transl_table=11 CP040687.1 Genbank gene 1486968 1487759 . - . ID=gene-IXO1088_007275;Name=IXO1088_007275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007275 CP040687.1 Protein Homology CDS 1486968 1487759 . - 0 ID=cds-QIE15246.1;Parent=gene-IXO1088_007275;Dbxref=NCBI_GP:QIE15246.1;Name=QIE15246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156587.1;locus_tag=IXO1088_007275;product=response regulator transcription factor;protein_id=QIE15246.1;transl_table=11 CP040687.1 Genbank gene 1488521 1489951 . + . ID=gene-IXO1088_007280;Name=IXO1088_007280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007280 CP040687.1 Protein Homology CDS 1488521 1489951 . + 0 ID=cds-QIE15247.1;Parent=gene-IXO1088_007280;Dbxref=NCBI_GP:QIE15247.1;Name=QIE15247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636541.1;locus_tag=IXO1088_007280;product=helix-turn-helix transcriptional regulator;protein_id=QIE15247.1;transl_table=11 CP040687.1 Genbank gene 1490164 1492032 . + . ID=gene-IXO1088_007285;Name=IXO1088_007285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007285 CP040687.1 Protein Homology CDS 1490164 1492032 . + 0 ID=cds-QIE15248.1;Parent=gene-IXO1088_007285;Dbxref=NCBI_GP:QIE15248.1;Name=QIE15248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005928780.1;locus_tag=IXO1088_007285;product=molecular chaperone HtpG;protein_id=QIE15248.1;transl_table=11 CP040687.1 Genbank gene 1492057 1494381 . + . ID=gene-IXO1088_007290;Name=IXO1088_007290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007290 CP040687.1 Protein Homology CDS 1492057 1494381 . + 0 ID=cds-QIE15249.1;Parent=gene-IXO1088_007290;Dbxref=NCBI_GP:QIE15249.1;Name=QIE15249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636543.1;locus_tag=IXO1088_007290;product=hypothetical protein;protein_id=QIE15249.1;transl_table=11 CP040687.1 Genbank pseudogene 1494980 1495675 . - . ID=gene-IXO1088_007295;Name=IXO1088_007295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007295;pseudo=true CP040687.1 Protein Homology CDS 1494980 1495675 . - 0 ID=cds-IXO1088_007295;Parent=gene-IXO1088_007295;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1088_007295;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1495687 1496492 . - . ID=gene-IXO1088_007300;Name=IXO1088_007300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007300;pseudo=true CP040687.1 Protein Homology CDS 1495687 1496492 . - 0 ID=cds-IXO1088_007300;Parent=gene-IXO1088_007300;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1088_007300;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1496561 1497016 . - . ID=gene-IXO1088_007305;Name=IXO1088_007305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007305;pseudo=true CP040687.1 Protein Homology CDS 1496561 1497016 . - 0 ID=cds-IXO1088_007305;Parent=gene-IXO1088_007305;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1088_007305;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1497082 1497207 . - . ID=gene-IXO1088_007310;Name=IXO1088_007310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007310;pseudo=true CP040687.1 Protein Homology CDS 1497082 1497207 . - 0 ID=cds-IXO1088_007310;Parent=gene-IXO1088_007310;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408523.1;locus_tag=IXO1088_007310;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1497171 1498355 . + . ID=gene-IXO1088_007315;Name=IXO1088_007315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007315 CP040687.1 Protein Homology CDS 1497171 1498355 . + 0 ID=cds-QIE15250.1;Parent=gene-IXO1088_007315;Dbxref=NCBI_GP:QIE15250.1;Name=QIE15250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557964.1;locus_tag=IXO1088_007315;product=IS256 family transposase;protein_id=QIE15250.1;transl_table=11 CP040687.1 Genbank gene 1498447 1499799 . - . ID=gene-IXO1088_007320;Name=IXO1088_007320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007320 CP040687.1 Protein Homology CDS 1498447 1499799 . - 0 ID=cds-QIE15251.1;Parent=gene-IXO1088_007320;Dbxref=NCBI_GP:QIE15251.1;Name=QIE15251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003466434.1;locus_tag=IXO1088_007320;product=glutamine synthetase;protein_id=QIE15251.1;transl_table=11 CP040687.1 Genbank gene 1499865 1500800 . - . ID=gene-IXO1088_007325;Name=IXO1088_007325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007325 CP040687.1 Protein Homology CDS 1499865 1500800 . - 0 ID=cds-QIE15252.1;Parent=gene-IXO1088_007325;Dbxref=NCBI_GP:QIE15252.1;Name=QIE15252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407945.1;locus_tag=IXO1088_007325;product=homoserine O-succinyltransferase;protein_id=QIE15252.1;transl_table=11 CP040687.1 Genbank gene 1500867 1501466 . - . ID=gene-IXO1088_007330;Name=IXO1088_007330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007330 CP040687.1 Protein Homology CDS 1500867 1501466 . - 0 ID=cds-QIE15253.1;Parent=gene-IXO1088_007330;Dbxref=NCBI_GP:QIE15253.1;Name=QIE15253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302837.1;locus_tag=IXO1088_007330;product=LysE family translocator;protein_id=QIE15253.1;transl_table=11 CP040687.1 Genbank gene 1501501 1502361 . - . ID=gene-IXO1088_007335;Name=IXO1088_007335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007335 CP040687.1 Protein Homology CDS 1501501 1502361 . - 0 ID=cds-QIE15254.1;Parent=gene-IXO1088_007335;Dbxref=NCBI_GP:QIE15254.1;Name=QIE15254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003477131.1;locus_tag=IXO1088_007335;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=QIE15254.1;transl_table=11 CP040687.1 Genbank gene 1502379 1503419 . - . ID=gene-IXO1088_007340;Name=IXO1088_007340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007340 CP040687.1 Protein Homology CDS 1502379 1503419 . - 0 ID=cds-QIE17901.1;Parent=gene-IXO1088_007340;Dbxref=NCBI_GP:QIE17901.1;Name=QIE17901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003477129.1;locus_tag=IXO1088_007340;product=dihydrorhizobitoxine desaturase;protein_id=QIE17901.1;transl_table=11 CP040687.1 Genbank gene 1503446 1504768 . - . ID=gene-IXO1088_007345;Name=IXO1088_007345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007345 CP040687.1 Protein Homology CDS 1503446 1504768 . - 0 ID=cds-QIE15255.1;Parent=gene-IXO1088_007345;Dbxref=NCBI_GP:QIE15255.1;Name=QIE15255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258200.1;locus_tag=IXO1088_007345;product=O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase;protein_id=QIE15255.1;transl_table=11 CP040687.1 Genbank gene 1504768 1505922 . - . ID=gene-IXO1088_007350;Name=IXO1088_007350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007350 CP040687.1 Protein Homology CDS 1504768 1505922 . - 0 ID=cds-QIE15256.1;Parent=gene-IXO1088_007350;Dbxref=NCBI_GP:QIE15256.1;Name=QIE15256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258201.1;locus_tag=IXO1088_007350;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=QIE15256.1;transl_table=11 CP040687.1 Genbank gene 1506200 1506466 . - . ID=gene-IXO1088_007355;Name=IXO1088_007355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007355 CP040687.1 Protein Homology CDS 1506200 1506466 . - 0 ID=cds-QIE15257.1;Parent=gene-IXO1088_007355;Dbxref=NCBI_GP:QIE15257.1;Name=QIE15257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113745.1;locus_tag=IXO1088_007355;product=hypothetical protein;protein_id=QIE15257.1;transl_table=11 CP040687.1 Genbank pseudogene 1507021 1507179 . - . ID=gene-IXO1088_007360;Name=IXO1088_007360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007360;pseudo=true CP040687.1 Protein Homology CDS 1507021 1507179 . - 0 ID=cds-IXO1088_007360;Parent=gene-IXO1088_007360;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612184.1;locus_tag=IXO1088_007360;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1507187 1508073 . - . ID=gene-IXO1088_007365;Name=IXO1088_007365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007365;pseudo=true CP040687.1 Protein Homology CDS 1507187 1508073 . - 0 ID=cds-IXO1088_007365;Parent=gene-IXO1088_007365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_007365;product=IS1595 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1508161 1509110 . - . ID=gene-IXO1088_007370;Name=IXO1088_007370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007370;pseudo=true CP040687.1 Protein Homology CDS 1508161 1509110 . - 0 ID=cds-IXO1088_007370;Parent=gene-IXO1088_007370;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1088_007370;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1509179 1509523 . - . ID=gene-IXO1088_007375;Name=IXO1088_007375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007375;pseudo=true CP040687.1 Protein Homology CDS 1509179 1509523 . - 0 ID=cds-IXO1088_007375;Parent=gene-IXO1088_007375;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_007375;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1509595 1509864 . + . ID=gene-IXO1088_007380;Name=IXO1088_007380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007380;pseudo=true CP040687.1 Protein Homology CDS 1509595 1509864 . + 0 ID=cds-IXO1088_007380;Parent=gene-IXO1088_007380;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=IXO1088_007380;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1510010 1510339 . - . ID=gene-IXO1088_007385;Name=IXO1088_007385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007385 CP040687.1 Protein Homology CDS 1510010 1510339 . - 0 ID=cds-QIE15258.1;Parent=gene-IXO1088_007385;Dbxref=NCBI_GP:QIE15258.1;Name=QIE15258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638119.1;locus_tag=IXO1088_007385;product=non-heme iron oxygenase ferredoxin subunit;protein_id=QIE15258.1;transl_table=11 CP040687.1 Genbank gene 1510336 1510875 . - . ID=gene-IXO1088_007390;Name=IXO1088_007390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007390 CP040687.1 Protein Homology CDS 1510336 1510875 . - 0 ID=cds-QIE15259.1;Parent=gene-IXO1088_007390;Dbxref=NCBI_GP:QIE15259.1;Name=QIE15259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157683.1;locus_tag=IXO1088_007390;product=GNAT family N-acetyltransferase;protein_id=QIE15259.1;transl_table=11 CP040687.1 Genbank gene 1510870 1511001 . + . ID=gene-IXO1088_007395;Name=IXO1088_007395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007395 CP040687.1 Protein Homology CDS 1510870 1511001 . + 0 ID=cds-QIE17902.1;Parent=gene-IXO1088_007395;Dbxref=NCBI_GP:QIE17902.1;Name=QIE17902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009149879.1;locus_tag=IXO1088_007395;product=AraC family transcriptional regulator;protein_id=QIE17902.1;transl_table=11 CP040687.1 Genbank gene 1511084 1512328 . - . ID=gene-IXO1088_007400;Name=IXO1088_007400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007400 CP040687.1 Protein Homology CDS 1511084 1512328 . - 0 ID=cds-QIE15260.1;Parent=gene-IXO1088_007400;Dbxref=NCBI_GP:QIE15260.1;Name=QIE15260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638117.1;locus_tag=IXO1088_007400;product=cysteine desulfurase;protein_id=QIE15260.1;transl_table=11 CP040687.1 Genbank gene 1512325 1513587 . - . ID=gene-IXO1088_007405;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=IXO1088_007405 CP040687.1 Protein Homology CDS 1512325 1513587 . - 0 ID=cds-QIE15261.1;Parent=gene-IXO1088_007405;Dbxref=NCBI_GP:QIE15261.1;Name=QIE15261.1;gbkey=CDS;gene=sufD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638116.1;locus_tag=IXO1088_007405;product=Fe-S cluster assembly protein SufD;protein_id=QIE15261.1;transl_table=11 CP040687.1 Genbank gene 1513587 1514351 . - . ID=gene-IXO1088_007410;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=IXO1088_007410 CP040687.1 Protein Homology CDS 1513587 1514351 . - 0 ID=cds-QIE15262.1;Parent=gene-IXO1088_007410;Dbxref=NCBI_GP:QIE15262.1;Name=QIE15262.1;gbkey=CDS;gene=sufC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638115.1;locus_tag=IXO1088_007410;product=Fe-S cluster assembly ATPase SufC;protein_id=QIE15262.1;transl_table=11 CP040687.1 Genbank gene 1514609 1516066 . - . ID=gene-IXO1088_007415;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=IXO1088_007415 CP040687.1 Protein Homology CDS 1514609 1516066 . - 0 ID=cds-QIE15263.1;Parent=gene-IXO1088_007415;Dbxref=NCBI_GP:QIE15263.1;Name=QIE15263.1;gbkey=CDS;gene=sufB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638114.1;locus_tag=IXO1088_007415;product=Fe-S cluster assembly protein SufB;protein_id=QIE15263.1;transl_table=11 CP040687.1 Genbank gene 1516082 1516540 . - . ID=gene-IXO1088_007420;Name=IXO1088_007420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007420 CP040687.1 Protein Homology CDS 1516082 1516540 . - 0 ID=cds-QIE15264.1;Parent=gene-IXO1088_007420;Dbxref=NCBI_GP:QIE15264.1;Name=QIE15264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638113.1;locus_tag=IXO1088_007420;product=SUF system Fe-S cluster assembly regulator;protein_id=QIE15264.1;transl_table=11 CP040687.1 Genbank gene 1516712 1517179 . + . ID=gene-IXO1088_007425;Name=IXO1088_007425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007425 CP040687.1 Protein Homology CDS 1516712 1517179 . + 0 ID=cds-QIE15265.1;Parent=gene-IXO1088_007425;Dbxref=NCBI_GP:QIE15265.1;Name=QIE15265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237451.1;locus_tag=IXO1088_007425;product=SET domain-containing protein-lysine N-methyltransferase;protein_id=QIE15265.1;transl_table=11 CP040687.1 Genbank gene 1517284 1517502 . + . ID=gene-IXO1088_007430;Name=IXO1088_007430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007430 CP040687.1 Protein Homology CDS 1517284 1517502 . + 0 ID=cds-QIE15266.1;Parent=gene-IXO1088_007430;Dbxref=NCBI_GP:QIE15266.1;Name=QIE15266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407955.1;locus_tag=IXO1088_007430;product=peptidase;protein_id=QIE15266.1;transl_table=11 CP040687.1 Genbank gene 1517497 1517573 . - . ID=gene-IXO1088_007435;Name=IXO1088_007435;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_007435 CP040687.1 cmsearch ncRNA 1517497 1517573 . - . ID=rna-IXO1088_007435;Parent=gene-IXO1088_007435;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_007435;product=sX9 sRNA CP040687.1 cmsearch exon 1517497 1517573 . - . ID=exon-IXO1088_007435-1;Parent=rna-IXO1088_007435;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_007435;product=sX9 sRNA CP040687.1 Genbank gene 1517609 1517989 . + . ID=gene-IXO1088_007440;Name=IXO1088_007440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007440 CP040687.1 Protein Homology CDS 1517609 1517989 . + 0 ID=cds-QIE15267.1;Parent=gene-IXO1088_007440;Dbxref=NCBI_GP:QIE15267.1;Name=QIE15267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851100.1;locus_tag=IXO1088_007440;product=hypothetical protein;protein_id=QIE15267.1;transl_table=11 CP040687.1 Genbank gene 1518107 1518703 . - . ID=gene-IXO1088_007445;Name=IXO1088_007445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007445 CP040687.1 Protein Homology CDS 1518107 1518703 . - 0 ID=cds-QIE15268.1;Parent=gene-IXO1088_007445;Dbxref=NCBI_GP:QIE15268.1;Name=QIE15268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638110.1;locus_tag=IXO1088_007445;product=DUF1439 domain-containing protein;protein_id=QIE15268.1;transl_table=11 CP040687.1 Genbank gene 1518759 1519301 . - . ID=gene-IXO1088_007450;Name=IXO1088_007450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007450 CP040687.1 Protein Homology CDS 1518759 1519301 . - 0 ID=cds-QIE15269.1;Parent=gene-IXO1088_007450;Dbxref=NCBI_GP:QIE15269.1;Name=QIE15269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407957.1;locus_tag=IXO1088_007450;product=hypothetical protein;protein_id=QIE15269.1;transl_table=11 CP040687.1 Genbank gene 1519359 1519700 . - . ID=gene-IXO1088_007455;Name=IXO1088_007455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007455 CP040687.1 Protein Homology CDS 1519359 1519700 . - 0 ID=cds-QIE15270.1;Parent=gene-IXO1088_007455;Dbxref=NCBI_GP:QIE15270.1;Name=QIE15270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157675.1;locus_tag=IXO1088_007455;product=DUF3861 domain-containing protein;protein_id=QIE15270.1;transl_table=11 CP040687.1 Genbank gene 1519758 1520399 . - . ID=gene-IXO1088_007460;Name=IXO1088_007460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007460 CP040687.1 Protein Homology CDS 1519758 1520399 . - 0 ID=cds-QIE15271.1;Parent=gene-IXO1088_007460;Dbxref=NCBI_GP:QIE15271.1;Name=QIE15271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157674.1;locus_tag=IXO1088_007460;product=M23 family metallopeptidase;protein_id=QIE15271.1;transl_table=11 CP040687.1 Genbank gene 1520505 1520930 . - . ID=gene-IXO1088_007465;Name=IXO1088_007465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007465 CP040687.1 Protein Homology CDS 1520505 1520930 . - 0 ID=cds-QIE17903.1;Parent=gene-IXO1088_007465;Dbxref=NCBI_GP:QIE17903.1;Name=QIE17903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638106.1;locus_tag=IXO1088_007465;product=DNA-binding protein;protein_id=QIE17903.1;transl_table=11 CP040687.1 Genbank gene 1521575 1522894 . - . ID=gene-IXO1088_007470;Name=IXO1088_007470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007470 CP040687.1 Protein Homology CDS 1521575 1522894 . - 0 ID=cds-QIE15272.1;Parent=gene-IXO1088_007470;Dbxref=NCBI_GP:QIE15272.1;Name=QIE15272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_007470;product=IS701 family transposase;protein_id=QIE15272.1;transl_table=11 CP040687.1 Genbank gene 1522965 1523825 . - . ID=gene-IXO1088_007475;Name=IXO1088_007475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007475 CP040687.1 Protein Homology CDS 1522965 1523825 . - 0 ID=cds-QIE15273.1;Parent=gene-IXO1088_007475;Dbxref=NCBI_GP:QIE15273.1;Name=QIE15273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348110.1;locus_tag=IXO1088_007475;product=pyrroline-5-carboxylate reductase;protein_id=QIE15273.1;transl_table=11 CP040687.1 Genbank gene 1523869 1524561 . - . ID=gene-IXO1088_007480;Name=IXO1088_007480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007480 CP040687.1 Protein Homology CDS 1523869 1524561 . - 0 ID=cds-QIE15274.1;Parent=gene-IXO1088_007480;Dbxref=NCBI_GP:QIE15274.1;Name=QIE15274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369321.1;locus_tag=IXO1088_007480;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=QIE15274.1;transl_table=11 CP040687.1 Genbank gene 1524925 1525962 . + . ID=gene-IXO1088_007485;Name=IXO1088_007485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007485 CP040687.1 Protein Homology CDS 1524925 1525962 . + 0 ID=cds-QIE15275.1;Parent=gene-IXO1088_007485;Dbxref=NCBI_GP:QIE15275.1;Name=QIE15275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638103.1;locus_tag=IXO1088_007485;product=type IV pilus twitching motility protein PilT;protein_id=QIE15275.1;transl_table=11 CP040687.1 Genbank gene 1526076 1527206 . + . ID=gene-IXO1088_007490;Name=IXO1088_007490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007490 CP040687.1 Protein Homology CDS 1526076 1527206 . + 0 ID=cds-QIE15276.1;Parent=gene-IXO1088_007490;Dbxref=NCBI_GP:QIE15276.1;Name=QIE15276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638102.1;locus_tag=IXO1088_007490;product=PilT/PilU family type 4a pilus ATPase;protein_id=QIE15276.1;transl_table=11 CP040687.1 Genbank gene 1527496 1528152 . + . ID=gene-IXO1088_007495;Name=IXO1088_007495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007495 CP040687.1 Protein Homology CDS 1527496 1528152 . + 0 ID=cds-QIE17904.1;Parent=gene-IXO1088_007495;Dbxref=NCBI_GP:QIE17904.1;Name=QIE17904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638101.1;locus_tag=IXO1088_007495;product=YitT family protein;protein_id=QIE17904.1;transl_table=11 CP040687.1 Genbank gene 1528182 1528257 . - . ID=gene-IXO1088_007500;Name=IXO1088_007500;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_007500 CP040687.1 cmsearch ncRNA 1528182 1528257 . - . ID=rna-IXO1088_007500;Parent=gene-IXO1088_007500;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_007500;product=sX9 sRNA CP040687.1 cmsearch exon 1528182 1528257 . - . ID=exon-IXO1088_007500-1;Parent=rna-IXO1088_007500;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_007500;product=sX9 sRNA CP040687.1 Genbank pseudogene 1528319 1528390 . + . ID=gene-IXO1088_007505;Name=IXO1088_007505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007505;pseudo=true CP040687.1 Protein Homology CDS 1528319 1528390 . + 0 ID=cds-IXO1088_007505;Parent=gene-IXO1088_007505;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504236.1;locus_tag=IXO1088_007505;product=amino acid transporter;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1528487 1528739 . - . ID=gene-IXO1088_007510;Name=IXO1088_007510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007510;pseudo=true CP040687.1 Protein Homology CDS 1528487 1528739 . - 0 ID=cds-IXO1088_007510;Parent=gene-IXO1088_007510;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638100.1;locus_tag=IXO1088_007510;product=DUF72 domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1528776 1529348 . - . ID=gene-IXO1088_007515;Name=IXO1088_007515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007515 CP040687.1 Protein Homology CDS 1528776 1529348 . - 0 ID=cds-QIE15277.1;Parent=gene-IXO1088_007515;Dbxref=NCBI_GP:QIE15277.1;Name=QIE15277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502539.1;locus_tag=IXO1088_007515;product=DNA-3-methyladenine glycosylase I;protein_id=QIE15277.1;transl_table=11 CP040687.1 Genbank pseudogene 1529345 1530548 . - . ID=gene-IXO1088_007520;Name=IXO1088_007520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007520;pseudo=true CP040687.1 Protein Homology CDS 1529345 1530548 . - 0 ID=cds-IXO1088_007520;Parent=gene-IXO1088_007520;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171967.1;locus_tag=IXO1088_007520;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1530624 1531190 . + . ID=gene-IXO1088_007525;Name=IXO1088_007525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007525 CP040687.1 Protein Homology CDS 1530624 1531190 . + 0 ID=cds-QIE15278.1;Parent=gene-IXO1088_007525;Dbxref=NCBI_GP:QIE15278.1;Name=QIE15278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638096.1;locus_tag=IXO1088_007525;product=YqgE/AlgH family protein;protein_id=QIE15278.1;transl_table=11 CP040687.1 Genbank gene 1531183 1531650 . + . ID=gene-IXO1088_007530;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=IXO1088_007530 CP040687.1 Protein Homology CDS 1531183 1531650 . + 0 ID=cds-QIE15279.1;Parent=gene-IXO1088_007530;Dbxref=NCBI_GP:QIE15279.1;Name=QIE15279.1;gbkey=CDS;gene=ruvX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638095.1;locus_tag=IXO1088_007530;product=Holliday junction resolvase RuvX;protein_id=QIE15279.1;transl_table=11 CP040687.1 Genbank gene 1531664 1532611 . + . ID=gene-IXO1088_007535;Name=IXO1088_007535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007535 CP040687.1 Protein Homology CDS 1531664 1532611 . + 0 ID=cds-QIE15280.1;Parent=gene-IXO1088_007535;Dbxref=NCBI_GP:QIE15280.1;Name=QIE15280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638094.1;locus_tag=IXO1088_007535;product=aspartate carbamoyltransferase;protein_id=QIE15280.1;transl_table=11 CP040687.1 Genbank gene 1532671 1532746 . + . ID=gene-IXO1088_007540;Name=IXO1088_007540;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_007540 CP040687.1 cmsearch ncRNA 1532671 1532746 . + . ID=rna-IXO1088_007540;Parent=gene-IXO1088_007540;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_007540;product=sX9 sRNA CP040687.1 cmsearch exon 1532671 1532746 . + . ID=exon-IXO1088_007540-1;Parent=rna-IXO1088_007540;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_007540;product=sX9 sRNA CP040687.1 Genbank gene 1533058 1533492 . + . ID=gene-IXO1088_007545;Name=IXO1088_007545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007545 CP040687.1 Protein Homology CDS 1533058 1533492 . + 0 ID=cds-QIE15281.1;Parent=gene-IXO1088_007545;Dbxref=NCBI_GP:QIE15281.1;Name=QIE15281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638093.1;locus_tag=IXO1088_007545;product=OsmC family protein;protein_id=QIE15281.1;transl_table=11 CP040687.1 Genbank gene 1533645 1534244 . + . ID=gene-IXO1088_007550;Name=IXO1088_007550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007550 CP040687.1 Protein Homology CDS 1533645 1534244 . + 0 ID=cds-QIE15282.1;Parent=gene-IXO1088_007550;Dbxref=NCBI_GP:QIE15282.1;Name=QIE15282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157223.1;locus_tag=IXO1088_007550;product=glycine zipper 2TM domain-containing protein;protein_id=QIE15282.1;transl_table=11 CP040687.1 Genbank gene 1534532 1535413 . - . ID=gene-IXO1088_007555;Name=IXO1088_007555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007555 CP040687.1 Protein Homology CDS 1534532 1535413 . - 0 ID=cds-QIE15283.1;Parent=gene-IXO1088_007555;Dbxref=NCBI_GP:QIE15283.1;Name=QIE15283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369373.1;locus_tag=IXO1088_007555;product=PhzF family phenazine biosynthesis protein;protein_id=QIE15283.1;transl_table=11 CP040687.1 Genbank pseudogene 1535445 1536330 . - . ID=gene-IXO1088_007560;Name=IXO1088_007560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007560;pseudo=true CP040687.1 Protein Homology CDS 1535445 1536330 . - 0 ID=cds-IXO1088_007560;Parent=gene-IXO1088_007560;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010375445.1;locus_tag=IXO1088_007560;product=PhzF family phenazine biosynthesis protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1536513 1539122 . + . ID=gene-IXO1088_007565;Name=IXO1088_007565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007565 CP040687.1 Protein Homology CDS 1536513 1539122 . + 0 ID=cds-QIE15284.1;Parent=gene-IXO1088_007565;Dbxref=NCBI_GP:QIE15284.1;Name=QIE15284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638089.1;locus_tag=IXO1088_007565;product=bifunctional aspartate kinase/diaminopimelate decarboxylase;protein_id=QIE15284.1;transl_table=11 CP040687.1 Genbank gene 1539106 1539564 . + . ID=gene-IXO1088_007570;Name=IXO1088_007570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007570 CP040687.1 Protein Homology CDS 1539106 1539564 . + 0 ID=cds-QIE15285.1;Parent=gene-IXO1088_007570;Dbxref=NCBI_GP:QIE15285.1;Name=QIE15285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502553.1;locus_tag=IXO1088_007570;product=hypothetical protein;protein_id=QIE15285.1;transl_table=11 CP040687.1 Genbank gene 1539561 1540916 . + . ID=gene-IXO1088_007575;Name=IXO1088_007575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007575 CP040687.1 Protein Homology CDS 1539561 1540916 . + 0 ID=cds-QIE15286.1;Parent=gene-IXO1088_007575;Dbxref=NCBI_GP:QIE15286.1;Name=QIE15286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258235.1;locus_tag=IXO1088_007575;product=endonuclease domain-containing protein;protein_id=QIE15286.1;transl_table=11 CP040687.1 Genbank gene 1540897 1542303 . + . ID=gene-IXO1088_007580;Name=IXO1088_007580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007580 CP040687.1 Protein Homology CDS 1540897 1542303 . + 0 ID=cds-QIE15287.1;Parent=gene-IXO1088_007580;Dbxref=NCBI_GP:QIE15287.1;Name=QIE15287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005926140.1;locus_tag=IXO1088_007580;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=QIE15287.1;transl_table=11 CP040687.1 Genbank gene 1542293 1542523 . + . ID=gene-IXO1088_007585;Name=IXO1088_007585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007585 CP040687.1 Protein Homology CDS 1542293 1542523 . + 0 ID=cds-QIE15288.1;Parent=gene-IXO1088_007585;Dbxref=NCBI_GP:QIE15288.1;Name=QIE15288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301688.1;locus_tag=IXO1088_007585;product=AsmA family protein;protein_id=QIE15288.1;transl_table=11 CP040687.1 Genbank gene 1542620 1543414 . + . ID=gene-IXO1088_007590;Name=IXO1088_007590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007590 CP040687.1 Protein Homology CDS 1542620 1543414 . + 0 ID=cds-QIE15289.1;Parent=gene-IXO1088_007590;Dbxref=NCBI_GP:QIE15289.1;Name=QIE15289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003473507.1;locus_tag=IXO1088_007590;product=dienelactone hydrolase family protein;protein_id=QIE15289.1;transl_table=11 CP040687.1 Genbank gene 1543599 1544597 . - . ID=gene-IXO1088_007595;Name=IXO1088_007595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007595 CP040687.1 Protein Homology CDS 1543599 1544597 . - 0 ID=cds-QIE17905.1;Parent=gene-IXO1088_007595;Dbxref=NCBI_GP:QIE17905.1;Name=QIE17905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638084.1;locus_tag=IXO1088_007595;product=octaprenyl-diphosphate synthase;protein_id=QIE17905.1;transl_table=11 CP040687.1 Genbank gene 1544873 1545409 . + . ID=gene-IXO1088_007600;Name=IXO1088_007600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007600 CP040687.1 Protein Homology CDS 1544873 1545409 . + 0 ID=cds-QIE15290.1;Parent=gene-IXO1088_007600;Dbxref=NCBI_GP:QIE15290.1;Name=QIE15290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638083.1;locus_tag=IXO1088_007600;product=single-stranded DNA-binding protein;protein_id=QIE15290.1;transl_table=11 CP040687.1 Genbank pseudogene 1545692 1546105 . - . ID=gene-IXO1088_007605;Name=IXO1088_007605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007605;pseudo=true CP040687.1 Protein Homology CDS 1545692 1546105 . - 0 ID=cds-IXO1088_007605;Parent=gene-IXO1088_007605;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638079.2;locus_tag=IXO1088_007605;product=GGDEF domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1546201 1547157 . + . ID=gene-IXO1088_007610;Name=IXO1088_007610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007610 CP040687.1 Protein Homology CDS 1546201 1547157 . + 0 ID=cds-QIE15291.1;Parent=gene-IXO1088_007610;Dbxref=NCBI_GP:QIE15291.1;Name=QIE15291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1088_007610;product=IS30-like element IS1112b family transposase;protein_id=QIE15291.1;transl_table=11 CP040687.1 Genbank pseudogene 1547169 1548083 . - . ID=gene-IXO1088_007615;Name=IXO1088_007615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007615;pseudo=true CP040687.1 Protein Homology CDS 1547169 1548083 . - 0 ID=cds-IXO1088_007615;Parent=gene-IXO1088_007615;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448865.1;locus_tag=IXO1088_007615;product=diguanylate cyclase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1548307 1549070 . - . ID=gene-IXO1088_007620;Name=IXO1088_007620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007620 CP040687.1 Protein Homology CDS 1548755 1549070 . - 0 ID=cds-QIE15292.1;Parent=gene-IXO1088_007620;Dbxref=NCBI_GP:QIE15292.1;Name=QIE15292.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_007620;product=IS5 family transposase;protein_id=QIE15292.1;transl_table=11 CP040687.1 Protein Homology CDS 1548307 1548755 . - 2 ID=cds-QIE15292.1;Parent=gene-IXO1088_007620;Dbxref=NCBI_GP:QIE15292.1;Name=QIE15292.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_007620;product=IS5 family transposase;protein_id=QIE15292.1;transl_table=11 CP040687.1 Genbank pseudogene 1549193 1550190 . + . ID=gene-IXO1088_007625;Name=IXO1088_007625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007625;pseudo=true CP040687.1 Protein Homology CDS 1549193 1550190 . + 0 ID=cds-IXO1088_007625;Parent=gene-IXO1088_007625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166271.1;locus_tag=IXO1088_007625;product=NAD(P)-dependent alcohol dehydrogenase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1550261 1551100 . + . ID=gene-IXO1088_007630;Name=IXO1088_007630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007630;pseudo=true CP040687.1 Protein Homology CDS 1550261 1551100 . + 0 ID=cds-IXO1088_007630;Parent=gene-IXO1088_007630;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_007630;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1551187 1552152 . + . ID=gene-IXO1088_007635;Name=IXO1088_007635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007635 CP040687.1 Protein Homology CDS 1551187 1552152 . + 0 ID=cds-QIE15293.1;Parent=gene-IXO1088_007635;Dbxref=NCBI_GP:QIE15293.1;Name=QIE15293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_007635;product=IS1595 family transposase;protein_id=QIE15293.1;transl_table=11 CP040687.1 Genbank pseudogene 1552159 1552296 . - . ID=gene-IXO1088_007640;Name=IXO1088_007640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007640;pseudo=true CP040687.1 Protein Homology CDS 1552159 1552296 . - 0 ID=cds-IXO1088_007640;Parent=gene-IXO1088_007640;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112231.1;locus_tag=IXO1088_007640;product=ankyrin repeat domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1552531 1553208 . + . ID=gene-IXO1088_007645;Name=IXO1088_007645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007645 CP040687.1 Protein Homology CDS 1552531 1553208 . + 0 ID=cds-QIE15294.1;Parent=gene-IXO1088_007645;Dbxref=NCBI_GP:QIE15294.1;Name=QIE15294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638068.1;locus_tag=IXO1088_007645;product=HAD family hydrolase;protein_id=QIE15294.1;transl_table=11 CP040687.1 Genbank gene 1553259 1553335 . - . ID=gene-IXO1088_007650;Name=IXO1088_007650;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_007650 CP040687.1 cmsearch ncRNA 1553259 1553335 . - . ID=rna-IXO1088_007650;Parent=gene-IXO1088_007650;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_007650;product=sX9 sRNA CP040687.1 cmsearch exon 1553259 1553335 . - . ID=exon-IXO1088_007650-1;Parent=rna-IXO1088_007650;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_007650;product=sX9 sRNA CP040687.1 Genbank gene 1553527 1553715 . + . ID=gene-IXO1088_007655;Name=IXO1088_007655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007655 CP040687.1 Protein Homology CDS 1553527 1553715 . + 0 ID=cds-QIE15295.1;Parent=gene-IXO1088_007655;Dbxref=NCBI_GP:QIE15295.1;Name=QIE15295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502578.1;locus_tag=IXO1088_007655;product=hypothetical protein;protein_id=QIE15295.1;transl_table=11 CP040687.1 Genbank gene 1553746 1553970 . - . ID=gene-IXO1088_007660;Name=IXO1088_007660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007660 CP040687.1 Protein Homology CDS 1553746 1553970 . - 0 ID=cds-QIE15296.1;Parent=gene-IXO1088_007660;Dbxref=NCBI_GP:QIE15296.1;Name=QIE15296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638067.1;locus_tag=IXO1088_007660;product=putative selenoprotein;protein_id=QIE15296.1;transl_table=11 CP040687.1 Genbank gene 1553970 1556042 . - . ID=gene-IXO1088_007665;Name=IXO1088_007665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007665 CP040687.1 Protein Homology CDS 1553970 1556042 . - 0 ID=cds-QIE15297.1;Parent=gene-IXO1088_007665;Dbxref=NCBI_GP:QIE15297.1;Name=QIE15297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638066.1;locus_tag=IXO1088_007665;product=carbon starvation protein A;protein_id=QIE15297.1;transl_table=11 CP040687.1 Genbank gene 1556273 1557130 . + . ID=gene-IXO1088_007670;Name=IXO1088_007670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007670 CP040687.1 Protein Homology CDS 1556273 1557130 . + 0 ID=cds-QIE15298.1;Parent=gene-IXO1088_007670;Dbxref=NCBI_GP:QIE15298.1;Name=QIE15298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157199.1;locus_tag=IXO1088_007670;product=pirin family protein;protein_id=QIE15298.1;transl_table=11 CP040687.1 Genbank pseudogene 1557164 1557579 . + . ID=gene-IXO1088_007675;Name=IXO1088_007675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007675;pseudo=true CP040687.1 Protein Homology CDS 1557164 1557579 . + 0 ID=cds-IXO1088_007675;Parent=gene-IXO1088_007675;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010375486.1;locus_tag=IXO1088_007675;product=OsmC family peroxiredoxin;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1558166 1560568 . + . ID=gene-IXO1088_007680;Name=IXO1088_007680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007680 CP040687.1 Protein Homology CDS 1558166 1560568 . + 0 ID=cds-QIE17906.1;Parent=gene-IXO1088_007680;Dbxref=NCBI_GP:QIE17906.1;Name=QIE17906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409214.1;locus_tag=IXO1088_007680;product=type VI secretion system tip protein VgrG;protein_id=QIE17906.1;transl_table=11 CP040687.1 Genbank gene 1560565 1561389 . + . ID=gene-IXO1088_007685;Name=IXO1088_007685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007685 CP040687.1 Protein Homology CDS 1560565 1561389 . + 0 ID=cds-QIE15299.1;Parent=gene-IXO1088_007685;Dbxref=NCBI_GP:QIE15299.1;Name=QIE15299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445684.1;locus_tag=IXO1088_007685;product=DUF4123 domain-containing protein;protein_id=QIE15299.1;transl_table=11 CP040687.1 Genbank gene 1561382 1561978 . + . ID=gene-IXO1088_007690;Name=IXO1088_007690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007690 CP040687.1 Protein Homology CDS 1561382 1561978 . + 0 ID=cds-QIE15300.1;Parent=gene-IXO1088_007690;Dbxref=NCBI_GP:QIE15300.1;Name=QIE15300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409212.1;locus_tag=IXO1088_007690;product=DUF3304 domain-containing protein;protein_id=QIE15300.1;transl_table=11 CP040687.1 Genbank gene 1562047 1562946 . + . ID=gene-IXO1088_007695;Name=IXO1088_007695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007695 CP040687.1 Protein Homology CDS 1562047 1562946 . + 0 ID=cds-QIE17907.1;Parent=gene-IXO1088_007695;Dbxref=NCBI_GP:QIE17907.1;Name=QIE17907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445682.1;locus_tag=IXO1088_007695;product=DUF2235 domain-containing protein;protein_id=QIE17907.1;transl_table=11 CP040687.1 Genbank gene 1562988 1563554 . + . ID=gene-IXO1088_007700;Name=IXO1088_007700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007700 CP040687.1 Protein Homology CDS 1562988 1563554 . + 0 ID=cds-QIE17908.1;Parent=gene-IXO1088_007700;Dbxref=NCBI_GP:QIE17908.1;Name=QIE17908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445681.1;locus_tag=IXO1088_007700;product=DUF3304 domain-containing protein;protein_id=QIE17908.1;transl_table=11 CP040687.1 Genbank gene 1563554 1565785 . + . ID=gene-IXO1088_007705;Name=IXO1088_007705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007705 CP040687.1 Protein Homology CDS 1563554 1565785 . + 0 ID=cds-QIE15301.1;Parent=gene-IXO1088_007705;Dbxref=NCBI_GP:QIE15301.1;Name=QIE15301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409211.1;locus_tag=IXO1088_007705;product=DUF2235 domain-containing protein;protein_id=QIE15301.1;transl_table=11 CP040687.1 Genbank gene 1565766 1566155 . + . ID=gene-IXO1088_007710;Name=IXO1088_007710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007710 CP040687.1 Protein Homology CDS 1565766 1566155 . + 0 ID=cds-QIE15302.1;Parent=gene-IXO1088_007710;Dbxref=NCBI_GP:QIE15302.1;Name=QIE15302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259961.1;locus_tag=IXO1088_007710;product=DUF2345 domain-containing protein;protein_id=QIE15302.1;transl_table=11 CP040687.1 Genbank pseudogene 1566202 1567422 . - . ID=gene-IXO1088_007715;Name=IXO1088_007715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007715;pseudo=true CP040687.1 Protein Homology CDS 1566202 1567422 . - 0 ID=cds-IXO1088_007715;Parent=gene-IXO1088_007715;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259951.1;locus_tag=IXO1088_007715;product=DUF2345 domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1567445 1568260 . - . ID=gene-IXO1088_007720;Name=IXO1088_007720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007720 CP040687.1 GeneMarkS-2+ CDS 1567445 1568260 . - 0 ID=cds-QIE15303.1;Parent=gene-IXO1088_007720;Dbxref=NCBI_GP:QIE15303.1;Name=QIE15303.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_007720;product=hypothetical protein;protein_id=QIE15303.1;transl_table=11 CP040687.1 Genbank gene 1568257 1571151 . - . ID=gene-IXO1088_007725;Name=IXO1088_007725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007725 CP040687.1 Protein Homology CDS 1568257 1571151 . - 0 ID=cds-QIE15304.1;Parent=gene-IXO1088_007725;Dbxref=NCBI_GP:QIE15304.1;Name=QIE15304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003469730.1;locus_tag=IXO1088_007725;product=calcium-binding protein;protein_id=QIE15304.1;transl_table=11 CP040687.1 Genbank gene 1571176 1573332 . - . ID=gene-IXO1088_007730;Name=IXO1088_007730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007730 CP040687.1 Protein Homology CDS 1571176 1573332 . - 0 ID=cds-QIE15305.1;Parent=gene-IXO1088_007730;Dbxref=NCBI_GP:QIE15305.1;Name=QIE15305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259949.1;locus_tag=IXO1088_007730;product=type VI secretion system tip protein VgrG;protein_id=QIE15305.1;transl_table=11 CP040687.1 Genbank gene 1573385 1573579 . - . ID=gene-IXO1088_007735;Name=IXO1088_007735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007735 CP040687.1 GeneMarkS-2+ CDS 1573385 1573579 . - 0 ID=cds-QIE15306.1;Parent=gene-IXO1088_007735;Dbxref=NCBI_GP:QIE15306.1;Name=QIE15306.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_007735;product=hypothetical protein;protein_id=QIE15306.1;transl_table=11 CP040687.1 Genbank gene 1573693 1574877 . - . ID=gene-IXO1088_007740;Name=IXO1088_007740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007740 CP040687.1 Protein Homology CDS 1573693 1574877 . - 0 ID=cds-QIE15307.1;Parent=gene-IXO1088_007740;Dbxref=NCBI_GP:QIE15307.1;Name=QIE15307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557964.1;locus_tag=IXO1088_007740;product=IS256 family transposase;protein_id=QIE15307.1;transl_table=11 CP040687.1 Genbank pseudogene 1574841 1574966 . + . ID=gene-IXO1088_007745;Name=IXO1088_007745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007745;pseudo=true CP040687.1 Protein Homology CDS 1574841 1574966 . + 0 ID=cds-IXO1088_007745;Parent=gene-IXO1088_007745;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408523.1;locus_tag=IXO1088_007745;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1574977 1576353 . + . ID=gene-IXO1088_007750;Name=IXO1088_007750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007750;pseudo=true CP040687.1 Protein Homology CDS 1574977 1576353 . + 0 ID=cds-IXO1088_007750;Parent=gene-IXO1088_007750;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041183487.1;locus_tag=IXO1088_007750;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1576566 1577168 . - . ID=gene-IXO1088_007755;Name=IXO1088_007755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007755 CP040687.1 GeneMarkS-2+ CDS 1576566 1577168 . - 0 ID=cds-QIE15308.1;Parent=gene-IXO1088_007755;Dbxref=NCBI_GP:QIE15308.1;Name=QIE15308.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_007755;product=hypothetical protein;protein_id=QIE15308.1;transl_table=11 CP040687.1 Genbank gene 1577165 1579405 . - . ID=gene-IXO1088_007760;Name=IXO1088_007760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007760 CP040687.1 Protein Homology CDS 1577165 1579405 . - 0 ID=cds-QIE15309.1;Parent=gene-IXO1088_007760;Dbxref=NCBI_GP:QIE15309.1;Name=QIE15309.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01551.20;locus_tag=IXO1088_007760;product=M23 family metallopeptidase;protein_id=QIE15309.1;transl_table=11 CP040687.1 Genbank pseudogene 1579404 1581872 . - . ID=gene-IXO1088_007765;Name=IXO1088_007765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007765;pseudo=true CP040687.1 Protein Homology CDS 1579404 1581872 . - 0 ID=cds-IXO1088_007765;Parent=gene-IXO1088_007765;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259949.1;locus_tag=IXO1088_007765;product=type VI secretion system tip protein VgrG;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1581883 1582671 . - . ID=gene-IXO1088_007770;Name=IXO1088_007770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007770 CP040687.1 Protein Homology CDS 1581883 1582671 . - 0 ID=cds-QIE17909.1;Parent=gene-IXO1088_007770;Dbxref=NCBI_GP:QIE17909.1;Name=QIE17909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812679.1;locus_tag=IXO1088_007770;product=DotU family type IV/VI secretion system protein;protein_id=QIE17909.1;transl_table=11 CP040687.1 Genbank pseudogene 1582671 1583654 . - . ID=gene-IXO1088_007775;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=pseudogene;locus_tag=IXO1088_007775;pseudo=true CP040687.1 Protein Homology CDS 1582671 1583654 . - 0 ID=cds-IXO1088_007775;Parent=gene-IXO1088_007775;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;gene=tssK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812677.1;locus_tag=IXO1088_007775;product=type VI secretion system baseplate subunit TssK;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1583656 1584735 . - . ID=gene-IXO1088_007780;Name=IXO1088_007780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007780 CP040687.1 Protein Homology CDS 1583656 1584735 . - 0 ID=cds-QIE15310.1;Parent=gene-IXO1088_007780;Dbxref=NCBI_GP:QIE15310.1;Name=QIE15310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812861.1;locus_tag=IXO1088_007780;product=hypothetical protein;protein_id=QIE15310.1;transl_table=11 CP040687.1 Genbank gene 1584732 1586165 . - . ID=gene-IXO1088_007785;Name=IXO1088_007785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007785 CP040687.1 Protein Homology CDS 1584732 1586165 . - 0 ID=cds-QIE15311.1;Parent=gene-IXO1088_007785;Dbxref=NCBI_GP:QIE15311.1;Name=QIE15311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502402.1;locus_tag=IXO1088_007785;product=hypothetical protein;protein_id=QIE15311.1;transl_table=11 CP040687.1 Genbank gene 1586174 1587253 . - . ID=gene-IXO1088_007790;Name=IXO1088_007790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007790 CP040687.1 Protein Homology CDS 1586174 1587253 . - 0 ID=cds-QIE15312.1;Parent=gene-IXO1088_007790;Dbxref=NCBI_GP:QIE15312.1;Name=QIE15312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812861.1;locus_tag=IXO1088_007790;product=hypothetical protein;protein_id=QIE15312.1;transl_table=11 CP040687.1 Genbank gene 1587250 1588737 . - . ID=gene-IXO1088_007795;Name=IXO1088_007795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007795 CP040687.1 Protein Homology CDS 1587250 1588737 . - 0 ID=cds-QIE17910.1;Parent=gene-IXO1088_007795;Dbxref=NCBI_GP:QIE17910.1;Name=QIE17910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502409.1;locus_tag=IXO1088_007795;product=hypothetical protein;protein_id=QIE17910.1;transl_table=11 CP040687.1 Genbank gene 1588797 1591529 . - . ID=gene-IXO1088_007800;Name=IXO1088_007800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007800 CP040687.1 Protein Homology CDS 1588797 1591529 . - 0 ID=cds-QIE17911.1;Parent=gene-IXO1088_007800;Dbxref=NCBI_GP:QIE17911.1;Name=QIE17911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409457.1;locus_tag=IXO1088_007800;product=type VI secretion system tip protein VgrG;protein_id=QIE17911.1;transl_table=11 CP040687.1 Genbank gene 1591636 1592424 . - . ID=gene-IXO1088_007805;Name=IXO1088_007805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007805 CP040687.1 Protein Homology CDS 1591636 1592424 . - 0 ID=cds-QIE17913.1;Parent=gene-IXO1088_007805;Dbxref=NCBI_GP:QIE17913.1;Name=QIE17913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812679.1;locus_tag=IXO1088_007805;product=DotU family type IV/VI secretion system protein;protein_id=QIE17913.1;transl_table=11 CP040687.1 Genbank gene 1592424 1593758 . - . ID=gene-IXO1088_007810;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=IXO1088_007810 CP040687.1 Protein Homology CDS 1592424 1593758 . - 0 ID=cds-QIE17912.1;Parent=gene-IXO1088_007810;Dbxref=NCBI_GP:QIE17912.1;Name=QIE17912.1;gbkey=CDS;gene=tssK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812677.1;locus_tag=IXO1088_007810;product=type VI secretion system baseplate subunit TssK;protein_id=QIE17912.1;transl_table=11 CP040687.1 Genbank gene 1593910 1594518 . - . ID=gene-IXO1088_007815;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=IXO1088_007815 CP040687.1 Protein Homology CDS 1593910 1594518 . - 0 ID=cds-QIE15313.1;Parent=gene-IXO1088_007815;Dbxref=NCBI_GP:QIE15313.1;Name=QIE15313.1;gbkey=CDS;gene=tssJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302181.1;locus_tag=IXO1088_007815;product=type VI secretion system lipoprotein TssJ;protein_id=QIE15313.1;transl_table=11 CP040687.1 Genbank gene 1594905 1595393 . + . ID=gene-IXO1088_007820;Name=IXO1088_007820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007820 CP040687.1 Protein Homology CDS 1594905 1595393 . + 0 ID=cds-QIE17914.1;Parent=gene-IXO1088_007820;Dbxref=NCBI_GP:QIE17914.1;Name=QIE17914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445672.1;locus_tag=IXO1088_007820;product=hypothetical protein;protein_id=QIE17914.1;transl_table=11 CP040687.1 Genbank gene 1595440 1595940 . + . ID=gene-IXO1088_007825;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=IXO1088_007825 CP040687.1 Protein Homology CDS 1595440 1595940 . + 0 ID=cds-QIE15314.1;Parent=gene-IXO1088_007825;Dbxref=NCBI_GP:QIE15314.1;Name=QIE15314.1;gbkey=CDS;gene=tssB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304314.1;locus_tag=IXO1088_007825;product=type VI secretion system contractile sheath small subunit;protein_id=QIE15314.1;transl_table=11 CP040687.1 Genbank gene 1595944 1597440 . + . ID=gene-IXO1088_007830;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=IXO1088_007830 CP040687.1 Protein Homology CDS 1595944 1597440 . + 0 ID=cds-QIE15315.1;Parent=gene-IXO1088_007830;Dbxref=NCBI_GP:QIE15315.1;Name=QIE15315.1;gbkey=CDS;gene=tssC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003467606.1;locus_tag=IXO1088_007830;product=type VI secretion system contractile sheath large subunit;protein_id=QIE15315.1;transl_table=11 CP040687.1 Genbank gene 1597582 1598079 . + . ID=gene-IXO1088_007835;Name=IXO1088_007835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007835 CP040687.1 Protein Homology CDS 1597582 1598079 . + 0 ID=cds-QIE15316.1;Parent=gene-IXO1088_007835;Dbxref=NCBI_GP:QIE15316.1;Name=QIE15316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006465355.1;locus_tag=IXO1088_007835;product=type VI secretion system tube protein Hcp;protein_id=QIE15316.1;transl_table=11 CP040687.1 Genbank gene 1598227 1598715 . + . ID=gene-IXO1088_007840;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=IXO1088_007840 CP040687.1 Protein Homology CDS 1598227 1598715 . + 0 ID=cds-QIE15317.1;Parent=gene-IXO1088_007840;Dbxref=NCBI_GP:QIE15317.1;Name=QIE15317.1;gbkey=CDS;gene=tssE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302186.1;locus_tag=IXO1088_007840;product=type VI secretion system baseplate subunit TssE;protein_id=QIE15317.1;transl_table=11 CP040687.1 Genbank gene 1598718 1600553 . + . ID=gene-IXO1088_007845;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=IXO1088_007845 CP040687.1 Protein Homology CDS 1598718 1600553 . + 0 ID=cds-QIE15318.1;Parent=gene-IXO1088_007845;Dbxref=NCBI_GP:QIE15318.1;Name=QIE15318.1;gbkey=CDS;gene=tssF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812662.1;locus_tag=IXO1088_007845;product=type VI secretion system baseplate subunit TssF;protein_id=QIE15318.1;transl_table=11 CP040687.1 Genbank gene 1600517 1601608 . + . ID=gene-IXO1088_007850;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=IXO1088_007850 CP040687.1 Protein Homology CDS 1600517 1601608 . + 0 ID=cds-QIE15319.1;Parent=gene-IXO1088_007850;Dbxref=NCBI_GP:QIE15319.1;Name=QIE15319.1;gbkey=CDS;gene=tssG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302188.1;locus_tag=IXO1088_007850;product=type VI secretion system baseplate subunit TssG;protein_id=QIE15319.1;transl_table=11 CP040687.1 Genbank gene 1601694 1604426 . + . ID=gene-IXO1088_007855;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;locus_tag=IXO1088_007855 CP040687.1 Protein Homology CDS 1601694 1604426 . + 0 ID=cds-QIE15320.1;Parent=gene-IXO1088_007855;Dbxref=NCBI_GP:QIE15320.1;Name=QIE15320.1;gbkey=CDS;gene=tssH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009241811.1;locus_tag=IXO1088_007855;product=type VI secretion system ATPase TssH;protein_id=QIE15320.1;transl_table=11 CP040687.1 Genbank gene 1604457 1604810 . + . ID=gene-IXO1088_007860;Name=IXO1088_007860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007860 CP040687.1 Protein Homology CDS 1604457 1604810 . + 0 ID=cds-QIE15321.1;Parent=gene-IXO1088_007860;Dbxref=NCBI_GP:QIE15321.1;Name=QIE15321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303308.1;locus_tag=IXO1088_007860;product=hypothetical protein;protein_id=QIE15321.1;transl_table=11 CP040687.1 Genbank gene 1604903 1607665 . + . ID=gene-IXO1088_007865;Name=IXO1088_007865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007865 CP040687.1 Protein Homology CDS 1604903 1607665 . + 0 ID=cds-QIE15322.1;Parent=gene-IXO1088_007865;Dbxref=NCBI_GP:QIE15322.1;Name=QIE15322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503453.1;locus_tag=IXO1088_007865;product=type VI secretion system tip protein VgrG;protein_id=QIE15322.1;transl_table=11 CP040687.1 Genbank gene 1607607 1608512 . + . ID=gene-IXO1088_007870;Name=IXO1088_007870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007870 CP040687.1 Protein Homology CDS 1607607 1608512 . + 0 ID=cds-QIE15323.1;Parent=gene-IXO1088_007870;Dbxref=NCBI_GP:QIE15323.1;Name=QIE15323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409200.1;locus_tag=IXO1088_007870;product=DUF4123 domain-containing protein;protein_id=QIE15323.1;transl_table=11 CP040687.1 Genbank gene 1608531 1611398 . + . ID=gene-IXO1088_007875;Name=IXO1088_007875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007875 CP040687.1 Protein Homology CDS 1608531 1611398 . + 0 ID=cds-QIE15324.1;Parent=gene-IXO1088_007875;Dbxref=NCBI_GP:QIE15324.1;Name=QIE15324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259933.1;locus_tag=IXO1088_007875;product=hypothetical protein;protein_id=QIE15324.1;transl_table=11 CP040687.1 Genbank gene 1611407 1612423 . + . ID=gene-IXO1088_007880;Name=IXO1088_007880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007880 CP040687.1 Protein Homology CDS 1611407 1612423 . + 0 ID=cds-QIE15325.1;Parent=gene-IXO1088_007880;Dbxref=NCBI_GP:QIE15325.1;Name=QIE15325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409196.1;locus_tag=IXO1088_007880;product=hypothetical protein;protein_id=QIE15325.1;transl_table=11 CP040687.1 Genbank pseudogene 1612717 1612830 . - . ID=gene-IXO1088_007885;Name=IXO1088_007885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007885;pseudo=true CP040687.1 Protein Homology CDS 1612717 1612830 . - 0 ID=cds-IXO1088_007885;Parent=gene-IXO1088_007885;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259931.1;locus_tag=IXO1088_007885;product=type VI secretion system tip protein VgrG;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1612908 1614917 . + . ID=gene-IXO1088_007890;Name=IXO1088_007890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007890 CP040687.1 Protein Homology CDS 1612908 1614917 . + 0 ID=cds-QIE17915.1;Parent=gene-IXO1088_007890;Dbxref=NCBI_GP:QIE17915.1;Name=QIE17915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503457.1;locus_tag=IXO1088_007890;product=DUF3784 domain-containing protein;protein_id=QIE17915.1;transl_table=11 CP040687.1 Genbank gene 1614926 1615957 . + . ID=gene-IXO1088_007895;Name=IXO1088_007895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007895 CP040687.1 Protein Homology CDS 1614926 1615957 . + 0 ID=cds-QIE15326.1;Parent=gene-IXO1088_007895;Dbxref=NCBI_GP:QIE15326.1;Name=QIE15326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409196.1;locus_tag=IXO1088_007895;product=hypothetical protein;protein_id=QIE15326.1;transl_table=11 CP040687.1 Genbank pseudogene 1616241 1616327 . - . ID=gene-IXO1088_007900;Name=IXO1088_007900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007900;pseudo=true CP040687.1 Protein Homology CDS 1616241 1616327 . - 0 ID=cds-IXO1088_007900;Parent=gene-IXO1088_007900;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259931.1;locus_tag=IXO1088_007900;product=type VI secretion system tip protein VgrG;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1616405 1618417 . + . ID=gene-IXO1088_007905;Name=IXO1088_007905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007905 CP040687.1 Protein Homology CDS 1616405 1618417 . + 0 ID=cds-QIE17916.1;Parent=gene-IXO1088_007905;Dbxref=NCBI_GP:QIE17916.1;Name=QIE17916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503459.1;locus_tag=IXO1088_007905;product=hypothetical protein;protein_id=QIE17916.1;transl_table=11 CP040687.1 Genbank gene 1618495 1619457 . + . ID=gene-IXO1088_007910;Name=IXO1088_007910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007910 CP040687.1 Protein Homology CDS 1618495 1619457 . + 0 ID=cds-QIE15327.1;Parent=gene-IXO1088_007910;Dbxref=NCBI_GP:QIE15327.1;Name=QIE15327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503456.1;locus_tag=IXO1088_007910;product=hypothetical protein;protein_id=QIE15327.1;transl_table=11 CP040687.1 Genbank pseudogene 1619751 1619852 . - . ID=gene-IXO1088_007915;Name=IXO1088_007915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007915;pseudo=true CP040687.1 Protein Homology CDS 1619751 1619852 . - 0 ID=cds-IXO1088_007915;Parent=gene-IXO1088_007915;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445662.1;locus_tag=IXO1088_007915;product=type VI secretion system tip protein VgrG;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1619851 1620375 . + . ID=gene-IXO1088_007920;Name=IXO1088_007920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007920;pseudo=true CP040687.1 Protein Homology CDS 1619851 1620375 . + 0 ID=cds-IXO1088_007920;Parent=gene-IXO1088_007920;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445663.1;locus_tag=IXO1088_007920;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1620287 1620784 . + . ID=gene-IXO1088_007925;Name=IXO1088_007925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007925;pseudo=true CP040687.1 Protein Homology CDS 1620287 1620784 . + 0 ID=cds-IXO1088_007925;Parent=gene-IXO1088_007925;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409191.1;locus_tag=IXO1088_007925;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1620669 1621424 . - . ID=gene-IXO1088_007930;Name=IXO1088_007930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007930 CP040687.1 Protein Homology CDS 1620669 1621424 . - 0 ID=cds-QIE15328.1;Parent=gene-IXO1088_007930;Dbxref=NCBI_GP:QIE15328.1;Name=QIE15328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259931.1;locus_tag=IXO1088_007930;product=type VI secretion system tip protein VgrG;protein_id=QIE15328.1;transl_table=11 CP040687.1 Genbank pseudogene 1621581 1621702 . + . ID=gene-IXO1088_007935;Name=IXO1088_007935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007935;pseudo=true CP040687.1 Protein Homology CDS 1621581 1621702 . + 0 ID=cds-IXO1088_007935;Parent=gene-IXO1088_007935;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611589.1;locus_tag=IXO1088_007935;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1621767 1621843 . + . ID=gene-IXO1088_007940;Name=IXO1088_007940;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_007940 CP040687.1 cmsearch ncRNA 1621767 1621843 . + . ID=rna-IXO1088_007940;Parent=gene-IXO1088_007940;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_007940;product=sX9 sRNA CP040687.1 cmsearch exon 1621767 1621843 . + . ID=exon-IXO1088_007940-1;Parent=rna-IXO1088_007940;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_007940;product=sX9 sRNA CP040687.1 Genbank gene 1622153 1622416 . + . ID=gene-IXO1088_007945;Name=IXO1088_007945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007945 CP040687.1 Protein Homology CDS 1622153 1622416 . + 0 ID=cds-QIE17917.1;Parent=gene-IXO1088_007945;Dbxref=NCBI_GP:QIE17917.1;Name=QIE17917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636440.1;locus_tag=IXO1088_007945;product=hypothetical protein;protein_id=QIE17917.1;transl_table=11 CP040687.1 Genbank gene 1622423 1622731 . + . ID=gene-IXO1088_007950;Name=IXO1088_007950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007950 CP040687.1 Protein Homology CDS 1622423 1622731 . + 0 ID=cds-QIE15329.1;Parent=gene-IXO1088_007950;Dbxref=NCBI_GP:QIE15329.1;Name=QIE15329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636441.1;locus_tag=IXO1088_007950;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=QIE15329.1;transl_table=11 CP040687.1 Genbank gene 1622765 1623271 . - . ID=gene-IXO1088_007955;Name=IXO1088_007955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007955 CP040687.1 Protein Homology CDS 1622765 1623271 . - 0 ID=cds-QIE17918.1;Parent=gene-IXO1088_007955;Dbxref=NCBI_GP:QIE17918.1;Name=QIE17918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259928.1;locus_tag=IXO1088_007955;product=type I restriction endonuclease subunit S;protein_id=QIE17918.1;transl_table=11 CP040687.1 Genbank pseudogene 1623626 1624177 . - . ID=gene-IXO1088_007960;Name=IXO1088_007960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_007960;pseudo=true CP040687.1 Protein Homology CDS 1623626 1624177 . - 0 ID=cds-IXO1088_007960;Parent=gene-IXO1088_007960;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014002.1;locus_tag=IXO1088_007960;product=restriction endonuclease subunit S;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1624167 1625711 . - . ID=gene-IXO1088_007965;Name=IXO1088_007965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007965 CP040687.1 Protein Homology CDS 1624167 1625711 . - 0 ID=cds-QIE15330.1;Parent=gene-IXO1088_007965;Dbxref=NCBI_GP:QIE15330.1;Name=QIE15330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114797.1;locus_tag=IXO1088_007965;product=SAM-dependent methyltransferase;protein_id=QIE15330.1;transl_table=11 CP040687.1 Genbank gene 1625758 1626756 . - . ID=gene-IXO1088_007970;Name=IXO1088_007970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007970 CP040687.1 Protein Homology CDS 1625758 1626756 . - 0 ID=cds-QIE15331.1;Parent=gene-IXO1088_007970;Dbxref=NCBI_GP:QIE15331.1;Name=QIE15331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409184.1;locus_tag=IXO1088_007970;product=Abi family protein;protein_id=QIE15331.1;transl_table=11 CP040687.1 Genbank gene 1626896 1630369 . - . ID=gene-IXO1088_007975;Name=hsdR;gbkey=Gene;gene=hsdR;gene_biotype=protein_coding;locus_tag=IXO1088_007975 CP040687.1 Protein Homology CDS 1626896 1630369 . - 0 ID=cds-QIE15332.1;Parent=gene-IXO1088_007975;Dbxref=NCBI_GP:QIE15332.1;Name=QIE15332.1;gbkey=CDS;gene=hsdR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930478.1;locus_tag=IXO1088_007975;product=type I restriction-modification system endonuclease;protein_id=QIE15332.1;transl_table=11 CP040687.1 Genbank gene 1630679 1630942 . + . ID=gene-IXO1088_007980;Name=IXO1088_007980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007980 CP040687.1 Protein Homology CDS 1630679 1630942 . + 0 ID=cds-QIE15333.1;Parent=gene-IXO1088_007980;Dbxref=NCBI_GP:QIE15333.1;Name=QIE15333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050743.1;locus_tag=IXO1088_007980;product=hypothetical protein;protein_id=QIE15333.1;transl_table=11 CP040687.1 Genbank gene 1630949 1631257 . + . ID=gene-IXO1088_007985;Name=IXO1088_007985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007985 CP040687.1 Protein Homology CDS 1630949 1631257 . + 0 ID=cds-QIE15334.1;Parent=gene-IXO1088_007985;Dbxref=NCBI_GP:QIE15334.1;Name=QIE15334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636441.1;locus_tag=IXO1088_007985;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=QIE15334.1;transl_table=11 CP040687.1 Genbank gene 1631336 1633717 . + . ID=gene-IXO1088_007990;Name=IXO1088_007990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007990 CP040687.1 Protein Homology CDS 1631336 1633717 . + 0 ID=cds-QIE15335.1;Parent=gene-IXO1088_007990;Dbxref=NCBI_GP:QIE15335.1;Name=QIE15335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920538.1;locus_tag=IXO1088_007990;product=DEAD/DEAH box helicase;protein_id=QIE15335.1;transl_table=11 CP040687.1 Genbank gene 1633781 1634416 . + . ID=gene-IXO1088_007995;Name=IXO1088_007995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_007995 CP040687.1 Protein Homology CDS 1633781 1634416 . + 0 ID=cds-QIE15336.1;Parent=gene-IXO1088_007995;Dbxref=NCBI_GP:QIE15336.1;Name=QIE15336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303840.1;locus_tag=IXO1088_007995;product=helix-turn-helix transcriptional regulator;protein_id=QIE15336.1;transl_table=11 CP040687.1 Genbank gene 1634416 1635138 . + . ID=gene-IXO1088_008000;Name=IXO1088_008000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008000 CP040687.1 Protein Homology CDS 1634416 1635138 . + 0 ID=cds-QIE15337.1;Parent=gene-IXO1088_008000;Dbxref=NCBI_GP:QIE15337.1;Name=QIE15337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005996136.1;locus_tag=IXO1088_008000;product=hypothetical protein;protein_id=QIE15337.1;transl_table=11 CP040687.1 Genbank gene 1635143 1636612 . + . ID=gene-IXO1088_008005;Name=IXO1088_008005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008005 CP040687.1 Protein Homology CDS 1635143 1636612 . + 0 ID=cds-QIE15338.1;Parent=gene-IXO1088_008005;Dbxref=NCBI_GP:QIE15338.1;Name=QIE15338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502311.1;locus_tag=IXO1088_008005;product=SAM-dependent DNA methyltransferase;protein_id=QIE15338.1;transl_table=11 CP040687.1 Genbank gene 1636609 1638150 . + . ID=gene-IXO1088_008010;Name=IXO1088_008010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008010 CP040687.1 Protein Homology CDS 1636609 1638150 . + 0 ID=cds-QIE15339.1;Parent=gene-IXO1088_008010;Dbxref=NCBI_GP:QIE15339.1;Name=QIE15339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004238561.1;locus_tag=IXO1088_008010;product=restriction endonuclease subunit S;protein_id=QIE15339.1;transl_table=11 CP040687.1 Genbank gene 1638141 1639097 . - . ID=gene-IXO1088_008015;Name=IXO1088_008015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008015 CP040687.1 Protein Homology CDS 1638141 1639097 . - 0 ID=cds-QIE15340.1;Parent=gene-IXO1088_008015;Dbxref=NCBI_GP:QIE15340.1;Name=QIE15340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1088_008015;product=IS30-like element IS1112b family transposase;protein_id=QIE15340.1;transl_table=11 CP040687.1 Genbank pseudogene 1639209 1639991 . + . ID=gene-IXO1088_008020;Name=IXO1088_008020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008020;pseudo=true CP040687.1 Protein Homology CDS 1639209 1639991 . + 0 ID=cds-IXO1088_008020;Parent=gene-IXO1088_008020;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851302.1;locus_tag=IXO1088_008020;product=restriction endonuclease subunit S;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1640150 1640331 . - . ID=gene-IXO1088_008025;Name=IXO1088_008025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008025;pseudo=true CP040687.1 Protein Homology CDS 1640150 1640331 . - 0 ID=cds-IXO1088_008025;Parent=gene-IXO1088_008025;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637260.1;locus_tag=IXO1088_008025;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1640380 1640646 . + . ID=gene-IXO1088_008030;Name=IXO1088_008030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008030 CP040687.1 Protein Homology CDS 1640380 1640646 . + 0 ID=cds-QIE15341.1;Parent=gene-IXO1088_008030;Dbxref=NCBI_GP:QIE15341.1;Name=QIE15341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502313.1;locus_tag=IXO1088_008030;product=hypothetical protein;protein_id=QIE15341.1;transl_table=11 CP040687.1 Genbank gene 1640895 1642469 . - . ID=gene-IXO1088_008035;Name=IXO1088_008035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008035 CP040687.1 Protein Homology CDS 1640895 1642469 . - 0 ID=cds-QIE15342.1;Parent=gene-IXO1088_008035;Dbxref=NCBI_GP:QIE15342.1;Name=QIE15342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161779.1;locus_tag=IXO1088_008035;product=serine/threonine protein kinase;protein_id=QIE15342.1;transl_table=11 CP040687.1 Genbank gene 1642639 1642905 . + . ID=gene-IXO1088_008040;Name=IXO1088_008040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008040 CP040687.1 Protein Homology CDS 1642639 1642905 . + 0 ID=cds-QIE15343.1;Parent=gene-IXO1088_008040;Dbxref=NCBI_GP:QIE15343.1;Name=QIE15343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300385.1;locus_tag=IXO1088_008040;product=hypothetical protein;protein_id=QIE15343.1;transl_table=11 CP040687.1 Genbank gene 1642878 1643627 . + . ID=gene-IXO1088_008045;Name=IXO1088_008045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008045 CP040687.1 Protein Homology CDS 1642878 1643627 . + 0 ID=cds-QIE15344.1;Parent=gene-IXO1088_008045;Dbxref=NCBI_GP:QIE15344.1;Name=QIE15344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157923.1;locus_tag=IXO1088_008045;product=hypothetical protein;protein_id=QIE15344.1;transl_table=11 CP040687.1 Genbank gene 1643983 1644738 . + . ID=gene-IXO1088_008050;Name=IXO1088_008050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008050 CP040687.1 Protein Homology CDS 1643983 1644738 . + 0 ID=cds-QIE15345.1;Parent=gene-IXO1088_008050;Dbxref=NCBI_GP:QIE15345.1;Name=QIE15345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157921.1;locus_tag=IXO1088_008050;product=hypothetical protein;protein_id=QIE15345.1;transl_table=11 CP040687.1 Genbank gene 1644799 1645428 . - . ID=gene-IXO1088_008055;Name=IXO1088_008055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008055 CP040687.1 Protein Homology CDS 1644799 1645428 . - 0 ID=cds-QIE15346.1;Parent=gene-IXO1088_008055;Dbxref=NCBI_GP:QIE15346.1;Name=QIE15346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636449.1;locus_tag=IXO1088_008055;product=TetR/AcrR family transcriptional regulator;protein_id=QIE15346.1;transl_table=11 CP040687.1 Genbank gene 1645643 1646422 . + . ID=gene-IXO1088_008060;Name=IXO1088_008060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008060 CP040687.1 Protein Homology CDS 1645643 1646422 . + 0 ID=cds-QIE15347.1;Parent=gene-IXO1088_008060;Dbxref=NCBI_GP:QIE15347.1;Name=QIE15347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636450.1;locus_tag=IXO1088_008060;product=histidine phosphatase family protein;protein_id=QIE15347.1;transl_table=11 CP040687.1 Genbank pseudogene 1646422 1647291 . + . ID=gene-IXO1088_008065;Name=IXO1088_008065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008065;pseudo=true CP040687.1 Protein Homology CDS 1646422 1647291 . + 0 ID=cds-IXO1088_008065;Parent=gene-IXO1088_008065;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849374.1;locus_tag=IXO1088_008065;product=NAD(P)H-hydrate dehydratase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1647590 1647742 . + . ID=gene-IXO1088_008070;Name=IXO1088_008070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008070;pseudo=true CP040687.1 Protein Homology CDS 1647590 1647742 . + 0 ID=cds-IXO1088_008070;Parent=gene-IXO1088_008070;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157900.1;locus_tag=IXO1088_008070;product=DNA-binding protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1647937 1648362 . - . ID=gene-IXO1088_008075;Name=IXO1088_008075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008075 CP040687.1 Protein Homology CDS 1647937 1648362 . - 0 ID=cds-QIE15348.1;Parent=gene-IXO1088_008075;Dbxref=NCBI_GP:QIE15348.1;Name=QIE15348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157899.1;locus_tag=IXO1088_008075;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=QIE15348.1;transl_table=11 CP040687.1 Genbank gene 1648372 1648593 . - . ID=gene-IXO1088_008080;Name=IXO1088_008080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008080 CP040687.1 Protein Homology CDS 1648372 1648593 . - 0 ID=cds-QIE15349.1;Parent=gene-IXO1088_008080;Dbxref=NCBI_GP:QIE15349.1;Name=QIE15349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302153.1;locus_tag=IXO1088_008080;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=QIE15349.1;transl_table=11 CP040687.1 Genbank gene 1648743 1649348 . + . ID=gene-IXO1088_008085;Name=IXO1088_008085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008085 CP040687.1 Protein Homology CDS 1648743 1649348 . + 0 ID=cds-QIE15350.1;Parent=gene-IXO1088_008085;Dbxref=NCBI_GP:QIE15350.1;Name=QIE15350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636473.1;locus_tag=IXO1088_008085;product=LexA repressor 1;protein_id=QIE15350.1;transl_table=11 CP040687.1 Genbank gene 1649398 1650000 . + . ID=gene-IXO1088_008090;Name=imuA;gbkey=Gene;gene=imuA;gene_biotype=protein_coding;locus_tag=IXO1088_008090 CP040687.1 Protein Homology CDS 1649398 1650000 . + 0 ID=cds-QIE17920.1;Parent=gene-IXO1088_008090;Dbxref=NCBI_GP:QIE17920.1;Name=QIE17920.1;gbkey=CDS;gene=imuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636474.1;locus_tag=IXO1088_008090;product=translesion DNA synthesis-associated protein ImuA;protein_id=QIE17920.1;transl_table=11 CP040687.1 Genbank gene 1650010 1651428 . + . ID=gene-IXO1088_008095;Name=IXO1088_008095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008095 CP040687.1 Protein Homology CDS 1650010 1651428 . + 0 ID=cds-QIE15351.1;Parent=gene-IXO1088_008095;Dbxref=NCBI_GP:QIE15351.1;Name=QIE15351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636475.1;locus_tag=IXO1088_008095;product=DNA polymerase Y family protein;protein_id=QIE15351.1;transl_table=11 CP040687.1 Genbank gene 1651441 1651623 . + . ID=gene-IXO1088_008100;Name=IXO1088_008100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008100 CP040687.1 Protein Homology CDS 1651441 1651623 . + 0 ID=cds-QIE17921.1;Parent=gene-IXO1088_008100;Dbxref=NCBI_GP:QIE17921.1;Name=QIE17921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157895.1;locus_tag=IXO1088_008100;product=hypothetical protein;protein_id=QIE17921.1;transl_table=11 CP040687.1 Genbank gene 1651664 1654861 . + . ID=gene-IXO1088_008105;Name=IXO1088_008105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008105 CP040687.1 Protein Homology CDS 1651664 1654861 . + 0 ID=cds-QIE17919.1;Parent=gene-IXO1088_008105;Dbxref=NCBI_GP:QIE17919.1;Name=QIE17919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636476.1;locus_tag=IXO1088_008105;product=error-prone DNA polymerase;protein_id=QIE17919.1;transl_table=11 CP040687.1 Genbank pseudogene 1654924 1655063 . - . ID=gene-IXO1088_008110;Name=IXO1088_008110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008110;pseudo=true CP040687.1 Protein Homology CDS 1654924 1655063 . - 0 ID=cds-IXO1088_008110;Parent=gene-IXO1088_008110;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965484.1;locus_tag=IXO1088_008110;product=transcriptional regulator;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1655172 1655990 . + . ID=gene-IXO1088_008115;Name=IXO1088_008115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008115 CP040687.1 Protein Homology CDS 1655172 1655990 . + 0 ID=cds-QIE17922.1;Parent=gene-IXO1088_008115;Dbxref=NCBI_GP:QIE17922.1;Name=QIE17922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814392.1;locus_tag=IXO1088_008115;product=HDOD domain-containing protein;protein_id=QIE17922.1;transl_table=11 CP040687.1 Genbank gene 1656103 1657500 . - . ID=gene-IXO1088_008120;Name=IXO1088_008120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008120 CP040687.1 Protein Homology CDS 1656103 1657500 . - 0 ID=cds-QIE15352.1;Parent=gene-IXO1088_008120;Dbxref=NCBI_GP:QIE15352.1;Name=QIE15352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302160.1;locus_tag=IXO1088_008120;product=serine protease;protein_id=QIE15352.1;transl_table=11 CP040687.1 Genbank gene 1657929 1659899 . + . ID=gene-IXO1088_008125;Name=IXO1088_008125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008125 CP040687.1 Protein Homology CDS 1657929 1659899 . + 0 ID=cds-QIE15353.1;Parent=gene-IXO1088_008125;Dbxref=NCBI_GP:QIE15353.1;Name=QIE15353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636478.1;locus_tag=IXO1088_008125;product=oligopeptide transporter%2C OPT family;protein_id=QIE15353.1;transl_table=11 CP040687.1 Genbank gene 1660334 1660410 . + . ID=gene-IXO1088_008130;Name=IXO1088_008130;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_008130 CP040687.1 cmsearch ncRNA 1660334 1660410 . + . ID=rna-IXO1088_008130;Parent=gene-IXO1088_008130;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_008130;product=sX9 sRNA CP040687.1 cmsearch exon 1660334 1660410 . + . ID=exon-IXO1088_008130-1;Parent=rna-IXO1088_008130;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_008130;product=sX9 sRNA CP040687.1 Genbank gene 1660405 1660767 . - . ID=gene-IXO1088_008135;Name=IXO1088_008135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008135 CP040687.1 Protein Homology CDS 1660405 1660767 . - 0 ID=cds-QIE15354.1;Parent=gene-IXO1088_008135;Dbxref=NCBI_GP:QIE15354.1;Name=QIE15354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112449.1;locus_tag=IXO1088_008135;product=hypothetical protein;protein_id=QIE15354.1;transl_table=11 CP040687.1 Genbank gene 1661024 1661869 . + . ID=gene-IXO1088_008140;Name=IXO1088_008140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008140 CP040687.1 Protein Homology CDS 1661024 1661869 . + 0 ID=cds-QIE15355.1;Parent=gene-IXO1088_008140;Dbxref=NCBI_GP:QIE15355.1;Name=QIE15355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158565.1;locus_tag=IXO1088_008140;product=transporter;protein_id=QIE15355.1;transl_table=11 CP040687.1 Genbank gene 1661931 1662002 . + . ID=gene-IXO1088_008145;Name=IXO1088_008145;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_008145 CP040687.1 cmsearch ncRNA 1661931 1662002 . + . ID=rna-IXO1088_008145;Parent=gene-IXO1088_008145;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_008145;product=sX9 sRNA CP040687.1 cmsearch exon 1661931 1662002 . + . ID=exon-IXO1088_008145-1;Parent=rna-IXO1088_008145;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_008145;product=sX9 sRNA CP040687.1 Genbank gene 1662136 1664256 . + . ID=gene-IXO1088_008150;Name=IXO1088_008150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008150 CP040687.1 Protein Homology CDS 1662136 1664256 . + 0 ID=cds-QIE15356.1;Parent=gene-IXO1088_008150;Dbxref=NCBI_GP:QIE15356.1;Name=QIE15356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636480.2;locus_tag=IXO1088_008150;product=S9 family peptidase;protein_id=QIE15356.1;transl_table=11 CP040687.1 Genbank pseudogene 1664330 1665707 . - . ID=gene-IXO1088_008155;Name=IXO1088_008155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008155;pseudo=true CP040687.1 Protein Homology CDS 1664330 1665707 . - 0 ID=cds-IXO1088_008155;Parent=gene-IXO1088_008155;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1088_008155;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1665789 1666192 . + . ID=gene-IXO1088_008160;Name=IXO1088_008160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008160;pseudo=true CP040687.1 Protein Homology CDS 1665789 1666192 . + 0 ID=cds-IXO1088_008160;Parent=gene-IXO1088_008160;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037261.1;locus_tag=IXO1088_008160;product=IS1595 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1666371 1666832 . + . ID=gene-IXO1088_008165;Name=IXO1088_008165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008165 CP040687.1 Protein Homology CDS 1666371 1666832 . + 0 ID=cds-QIE15357.1;Parent=gene-IXO1088_008165;Dbxref=NCBI_GP:QIE15357.1;Name=QIE15357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157885.1;locus_tag=IXO1088_008165;product=hypothetical protein;protein_id=QIE15357.1;transl_table=11 CP040687.1 Genbank gene 1666964 1667689 . + . ID=gene-IXO1088_008170;Name=IXO1088_008170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008170 CP040687.1 Protein Homology CDS 1666964 1667689 . + 0 ID=cds-QIE15358.1;Parent=gene-IXO1088_008170;Dbxref=NCBI_GP:QIE15358.1;Name=QIE15358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371630.1;locus_tag=IXO1088_008170;product=AraC family transcriptional regulator;protein_id=QIE15358.1;transl_table=11 CP040687.1 Genbank gene 1667920 1667996 . + . ID=gene-IXO1088_008175;Name=IXO1088_008175;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_008175 CP040687.1 cmsearch ncRNA 1667920 1667996 . + . ID=rna-IXO1088_008175;Parent=gene-IXO1088_008175;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_008175;product=sX9 sRNA CP040687.1 cmsearch exon 1667920 1667996 . + . ID=exon-IXO1088_008175-1;Parent=rna-IXO1088_008175;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_008175;product=sX9 sRNA CP040687.1 Genbank gene 1668522 1670663 . + . ID=gene-IXO1088_008180;Name=IXO1088_008180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008180 CP040687.1 Protein Homology CDS 1668522 1670663 . + 0 ID=cds-QIE15359.1;Parent=gene-IXO1088_008180;Dbxref=NCBI_GP:QIE15359.1;Name=QIE15359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259894.1;locus_tag=IXO1088_008180;product=outer protein P;protein_id=QIE15359.1;transl_table=11 CP040687.1 Genbank gene 1670780 1672912 . + . ID=gene-IXO1088_008185;Name=IXO1088_008185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008185 CP040687.1 Protein Homology CDS 1670780 1672912 . + 0 ID=cds-QIE15360.1;Parent=gene-IXO1088_008185;Dbxref=NCBI_GP:QIE15360.1;Name=QIE15360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259893.1;locus_tag=IXO1088_008185;product=outer protein P;protein_id=QIE15360.1;transl_table=11 CP040687.1 Genbank gene 1673140 1674378 . - . ID=gene-IXO1088_008190;Name=IXO1088_008190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008190 CP040687.1 Protein Homology CDS 1673140 1674378 . - 0 ID=cds-QIE17923.1;Parent=gene-IXO1088_008190;Dbxref=NCBI_GP:QIE17923.1;Name=QIE17923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154699.1;locus_tag=IXO1088_008190;product=type III secretion system effector protein;protein_id=QIE17923.1;transl_table=11 CP040687.1 Genbank gene 1674654 1674842 . - . ID=gene-IXO1088_008195;Name=IXO1088_008195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008195 CP040687.1 Protein Homology CDS 1674654 1674842 . - 0 ID=cds-QIE15361.1;Parent=gene-IXO1088_008195;Dbxref=NCBI_GP:QIE15361.1;Name=QIE15361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346716.1;locus_tag=IXO1088_008195;product=hypothetical protein;protein_id=QIE15361.1;transl_table=11 CP040687.1 Genbank gene 1675204 1677309 . - . ID=gene-IXO1088_008200;Name=IXO1088_008200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008200 CP040687.1 Protein Homology CDS 1675204 1677309 . - 0 ID=cds-QIE15362.1;Parent=gene-IXO1088_008200;Dbxref=NCBI_GP:QIE15362.1;Name=QIE15362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636484.1;locus_tag=IXO1088_008200;product=catalase;protein_id=QIE15362.1;transl_table=11 CP040687.1 Genbank pseudogene 1677404 1677779 . - . ID=gene-IXO1088_008205;Name=IXO1088_008205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008205;pseudo=true CP040687.1 Protein Homology CDS 1677404 1677779 . - 0 ID=cds-IXO1088_008205;Parent=gene-IXO1088_008205;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302046.1;locus_tag=IXO1088_008205;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1677835 1678260 . - . ID=gene-IXO1088_008210;Name=IXO1088_008210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008210;pseudo=true CP040687.1 Protein Homology CDS 1677835 1678260 . - 0 ID=cds-IXO1088_008210;Parent=gene-IXO1088_008210;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409251.1;locus_tag=IXO1088_008210;product=DUF3396 domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1678336 1679337 . + . ID=gene-IXO1088_008215;Name=IXO1088_008215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008215 CP040687.1 Protein Homology CDS 1678336 1679337 . + 0 ID=cds-QIE15363.1;Parent=gene-IXO1088_008215;Dbxref=NCBI_GP:QIE15363.1;Name=QIE15363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445627.1;locus_tag=IXO1088_008215;product=IS630 family transposase;protein_id=QIE15363.1;transl_table=11 CP040687.1 Genbank gene 1679475 1682315 . + . ID=gene-IXO1088_008220;Name=IXO1088_008220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008220 CP040687.1 Protein Homology CDS 1679475 1682315 . + 0 ID=cds-QIE15364.1;Parent=gene-IXO1088_008220;Dbxref=NCBI_GP:QIE15364.1;Name=QIE15364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118832.1;locus_tag=IXO1088_008220;product=DUF2339 domain-containing protein;protein_id=QIE15364.1;transl_table=11 CP040687.1 Genbank gene 1682312 1683670 . + . ID=gene-IXO1088_008225;Name=IXO1088_008225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008225 CP040687.1 Protein Homology CDS 1682312 1683670 . + 0 ID=cds-QIE15365.1;Parent=gene-IXO1088_008225;Dbxref=NCBI_GP:QIE15365.1;Name=QIE15365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370858.1;locus_tag=IXO1088_008225;product=DUF3999 domain-containing protein;protein_id=QIE15365.1;transl_table=11 CP040687.1 Genbank gene 1683734 1683961 . + . ID=gene-IXO1088_008230;Name=IXO1088_008230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008230 CP040687.1 Protein Homology CDS 1683734 1683961 . + 0 ID=cds-QIE15366.1;Parent=gene-IXO1088_008230;Dbxref=NCBI_GP:QIE15366.1;Name=QIE15366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300873.1;locus_tag=IXO1088_008230;product=hypothetical protein;protein_id=QIE15366.1;transl_table=11 CP040687.1 Genbank gene 1684004 1685179 . + . ID=gene-IXO1088_008235;Name=IXO1088_008235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008235 CP040687.1 Protein Homology CDS 1684004 1685179 . + 0 ID=cds-QIE15367.1;Parent=gene-IXO1088_008235;Dbxref=NCBI_GP:QIE15367.1;Name=QIE15367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638534.1;locus_tag=IXO1088_008235;product=phosphoglycerate kinase;protein_id=QIE15367.1;transl_table=11 CP040687.1 Genbank gene 1685176 1685820 . + . ID=gene-IXO1088_008240;Name=IXO1088_008240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008240 CP040687.1 Protein Homology CDS 1685176 1685820 . + 0 ID=cds-QIE15368.1;Parent=gene-IXO1088_008240;Dbxref=NCBI_GP:QIE15368.1;Name=QIE15368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638533.1;locus_tag=IXO1088_008240;product=HAD family hydrolase;protein_id=QIE15368.1;transl_table=11 CP040687.1 Genbank gene 1686077 1687543 . + . ID=gene-IXO1088_008245;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=IXO1088_008245 CP040687.1 Protein Homology CDS 1686077 1687543 . + 0 ID=cds-QIE15369.1;Parent=gene-IXO1088_008245;Dbxref=NCBI_GP:QIE15369.1;Name=QIE15369.1;gbkey=CDS;gene=pyk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638532.2;locus_tag=IXO1088_008245;product=pyruvate kinase;protein_id=QIE15369.1;transl_table=11 CP040687.1 Genbank pseudogene 1687935 1688143 . + . ID=gene-IXO1088_008250;Name=IXO1088_008250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008250;pseudo=true CP040687.1 Protein Homology CDS 1687935 1688143 . + 0 ID=cds-IXO1088_008250;Parent=gene-IXO1088_008250;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090929.1;locus_tag=IXO1088_008250;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1688140 1689144 . + . ID=gene-IXO1088_008255;Name=IXO1088_008255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008255 CP040687.1 Protein Homology CDS 1688140 1689144 . + 0 ID=cds-QIE15370.1;Parent=gene-IXO1088_008255;Dbxref=NCBI_GP:QIE15370.1;Name=QIE15370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638531.1;locus_tag=IXO1088_008255;product=fructose-bisphosphate aldolase class I;protein_id=QIE15370.1;transl_table=11 CP040687.1 Genbank gene 1689346 1689885 . - . ID=gene-IXO1088_008260;Name=IXO1088_008260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008260 CP040687.1 Protein Homology CDS 1689346 1689885 . - 0 ID=cds-QIE15371.1;Parent=gene-IXO1088_008260;Dbxref=NCBI_GP:QIE15371.1;Name=QIE15371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638530.1;locus_tag=IXO1088_008260;product=O-acetyl-ADP-ribose deacetylase;protein_id=QIE15371.1;transl_table=11 CP040687.1 Genbank gene 1690081 1690587 . - . ID=gene-IXO1088_008265;Name=IXO1088_008265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008265 CP040687.1 Protein Homology CDS 1690081 1690587 . - 0 ID=cds-QIE15372.1;Parent=gene-IXO1088_008265;Dbxref=NCBI_GP:QIE15372.1;Name=QIE15372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638529.1;locus_tag=IXO1088_008265;product=isoprenylcysteine carboxylmethyltransferase family protein;protein_id=QIE15372.1;transl_table=11 CP040687.1 Genbank gene 1690903 1691862 . - . ID=gene-IXO1088_008270;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=IXO1088_008270 CP040687.1 Protein Homology CDS 1690903 1691862 . - 0 ID=cds-QIE15373.1;Parent=gene-IXO1088_008270;Dbxref=NCBI_GP:QIE15373.1;Name=QIE15373.1;gbkey=CDS;gene=cysK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638528.1;locus_tag=IXO1088_008270;product=cysteine synthase A;protein_id=QIE15373.1;transl_table=11 CP040687.1 Genbank gene 1691879 1693084 . - . ID=gene-IXO1088_008275;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=IXO1088_008275 CP040687.1 Protein Homology CDS 1691879 1693084 . - 0 ID=cds-QIE15374.1;Parent=gene-IXO1088_008275;Dbxref=NCBI_GP:QIE15374.1;Name=QIE15374.1;gbkey=CDS;gene=cobA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638527.1;locus_tag=IXO1088_008275;product=uroporphyrinogen-III C-methyltransferase;protein_id=QIE15374.1;transl_table=11 CP040687.1 Genbank gene 1693252 1694235 . + . ID=gene-IXO1088_008280;Name=IXO1088_008280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008280 CP040687.1 Protein Homology CDS 1693252 1694235 . + 0 ID=cds-QIE15375.1;Parent=gene-IXO1088_008280;Dbxref=NCBI_GP:QIE15375.1;Name=QIE15375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638526.1;locus_tag=IXO1088_008280;product=LysR family transcriptional regulator;protein_id=QIE15375.1;transl_table=11 CP040687.1 Genbank gene 1694246 1694527 . + . ID=gene-IXO1088_008285;Name=IXO1088_008285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008285 CP040687.1 Protein Homology CDS 1694246 1694527 . + 0 ID=cds-QIE15376.1;Parent=gene-IXO1088_008285;Dbxref=NCBI_GP:QIE15376.1;Name=QIE15376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504383.1;locus_tag=IXO1088_008285;product=hypothetical protein;protein_id=QIE15376.1;transl_table=11 CP040687.1 Genbank gene 1694543 1694617 . - . ID=gene-IXO1088_008290;Name=IXO1088_008290;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_008290 CP040687.1 cmsearch ncRNA 1694543 1694617 . - . ID=rna-IXO1088_008290;Parent=gene-IXO1088_008290;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_008290;product=sX9 sRNA CP040687.1 cmsearch exon 1694543 1694617 . - . ID=exon-IXO1088_008290-1;Parent=rna-IXO1088_008290;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_008290;product=sX9 sRNA CP040687.1 Genbank gene 1694867 1694943 . + . ID=gene-IXO1088_008295;Name=IXO1088_008295;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_008295 CP040687.1 cmsearch ncRNA 1694867 1694943 . + . ID=rna-IXO1088_008295;Parent=gene-IXO1088_008295;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_008295;product=sX9 sRNA CP040687.1 cmsearch exon 1694867 1694943 . + . ID=exon-IXO1088_008295-1;Parent=rna-IXO1088_008295;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_008295;product=sX9 sRNA CP040687.1 Genbank gene 1694938 1695147 . - . ID=gene-IXO1088_008300;Name=IXO1088_008300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008300 CP040687.1 Protein Homology CDS 1694938 1695147 . - 0 ID=cds-QIE15377.1;Parent=gene-IXO1088_008300;Dbxref=NCBI_GP:QIE15377.1;Name=QIE15377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370900.1;locus_tag=IXO1088_008300;product=hypothetical protein;protein_id=QIE15377.1;transl_table=11 CP040687.1 Genbank gene 1695420 1695493 . - . ID=gene-IXO1088_008305;Name=IXO1088_008305;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_008305 CP040687.1 cmsearch ncRNA 1695420 1695493 . - . ID=rna-IXO1088_008305;Parent=gene-IXO1088_008305;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_008305;product=sX9 sRNA CP040687.1 cmsearch exon 1695420 1695493 . - . ID=exon-IXO1088_008305-1;Parent=rna-IXO1088_008305;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_008305;product=sX9 sRNA CP040687.1 Genbank gene 1695597 1696793 . - . ID=gene-IXO1088_008310;Name=IXO1088_008310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008310 CP040687.1 Protein Homology CDS 1695597 1696793 . - 0 ID=cds-QIE15378.1;Parent=gene-IXO1088_008310;Dbxref=NCBI_GP:QIE15378.1;Name=QIE15378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155473.1;locus_tag=IXO1088_008310;product=GAF domain-containing sensor histidine kinase;protein_id=QIE15378.1;transl_table=11 CP040687.1 Genbank gene 1697116 1697553 . + . ID=gene-IXO1088_008315;Name=IXO1088_008315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008315 CP040687.1 Protein Homology CDS 1697116 1697553 . + 0 ID=cds-QIE15379.1;Parent=gene-IXO1088_008315;Dbxref=NCBI_GP:QIE15379.1;Name=QIE15379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850457.1;locus_tag=IXO1088_008315;product=DUF2946 domain-containing protein;protein_id=QIE15379.1;transl_table=11 CP040687.1 Genbank gene 1697691 1699751 . + . ID=gene-IXO1088_008320;Name=IXO1088_008320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008320 CP040687.1 Protein Homology CDS 1697691 1699751 . + 0 ID=cds-QIE15380.1;Parent=gene-IXO1088_008320;Dbxref=NCBI_GP:QIE15380.1;Name=QIE15380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638523.1;locus_tag=IXO1088_008320;product=TonB-dependent receptor;protein_id=QIE15380.1;transl_table=11 CP040687.1 Genbank gene 1699751 1701343 . + . ID=gene-IXO1088_008325;Name=IXO1088_008325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008325 CP040687.1 Protein Homology CDS 1699751 1701343 . + 0 ID=cds-QIE15381.1;Parent=gene-IXO1088_008325;Dbxref=NCBI_GP:QIE15381.1;Name=QIE15381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114669.1;locus_tag=IXO1088_008325;product=PepSY domain-containing protein;protein_id=QIE15381.1;transl_table=11 CP040687.1 Genbank gene 1701479 1702204 . - . ID=gene-IXO1088_008330;Name=IXO1088_008330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008330 CP040687.1 Protein Homology CDS 1701479 1702204 . - 0 ID=cds-QIE15382.1;Parent=gene-IXO1088_008330;Dbxref=NCBI_GP:QIE15382.1;Name=QIE15382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638521.1;locus_tag=IXO1088_008330;product=phosphoadenylyl-sulfate reductase;protein_id=QIE15382.1;transl_table=11 CP040687.1 Genbank gene 1702201 1703922 . - . ID=gene-IXO1088_008335;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=IXO1088_008335 CP040687.1 Protein Homology CDS 1702201 1703922 . - 0 ID=cds-QIE15383.1;Parent=gene-IXO1088_008335;Dbxref=NCBI_GP:QIE15383.1;Name=QIE15383.1;gbkey=CDS;gene=cysI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409143.1;locus_tag=IXO1088_008335;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=QIE15383.1;transl_table=11 CP040687.1 Genbank gene 1704031 1705878 . - . ID=gene-IXO1088_008340;Name=IXO1088_008340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008340 CP040687.1 Protein Homology CDS 1704031 1705878 . - 0 ID=cds-QIE15384.1;Parent=gene-IXO1088_008340;Dbxref=NCBI_GP:QIE15384.1;Name=QIE15384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638519.1;locus_tag=IXO1088_008340;product=assimilatory sulfite reductase (NADPH) flavoprotein subunit;protein_id=QIE15384.1;transl_table=11 CP040687.1 Genbank gene 1706059 1706967 . + . ID=gene-IXO1088_008345;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=IXO1088_008345 CP040687.1 Protein Homology CDS 1706059 1706967 . + 0 ID=cds-QIE15385.1;Parent=gene-IXO1088_008345;Dbxref=NCBI_GP:QIE15385.1;Name=QIE15385.1;gbkey=CDS;gene=cysD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638518.1;locus_tag=IXO1088_008345;product=sulfate adenylyltransferase subunit CysD;protein_id=QIE15385.1;transl_table=11 CP040687.1 Genbank gene 1706967 1708943 . + . ID=gene-IXO1088_008350;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=IXO1088_008350 CP040687.1 Protein Homology CDS 1706967 1708943 . + 0 ID=cds-QIE15386.1;Parent=gene-IXO1088_008350;Dbxref=NCBI_GP:QIE15386.1;Name=QIE15386.1;gbkey=CDS;gene=cysN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638517.1;locus_tag=IXO1088_008350;product=sulfate adenylyltransferase subunit CysN;protein_id=QIE15386.1;transl_table=11 CP040687.1 Genbank pseudogene 1709093 1709248 . - . ID=gene-IXO1088_008355;Name=IXO1088_008355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008355;pseudo=true CP040687.1 Protein Homology CDS 1709093 1709248 . - 0 ID=cds-IXO1088_008355;Parent=gene-IXO1088_008355;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258951.1;locus_tag=IXO1088_008355;product=pectate lyase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1709378 1710448 . + . ID=gene-IXO1088_008360;Name=IXO1088_008360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008360 CP040687.1 Protein Homology CDS 1709378 1710448 . + 0 ID=cds-QIE15387.1;Parent=gene-IXO1088_008360;Dbxref=NCBI_GP:QIE15387.1;Name=QIE15387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974022.1;locus_tag=IXO1088_008360;product=efflux RND transporter periplasmic adaptor subunit;protein_id=QIE15387.1;transl_table=11 CP040687.1 Genbank gene 1710445 1713570 . + . ID=gene-IXO1088_008365;Name=IXO1088_008365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008365 CP040687.1 Protein Homology CDS 1710445 1713570 . + 0 ID=cds-QIE15388.1;Parent=gene-IXO1088_008365;Dbxref=NCBI_GP:QIE15388.1;Name=QIE15388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638515.1;locus_tag=IXO1088_008365;product=efflux RND transporter permease subunit;protein_id=QIE15388.1;transl_table=11 CP040687.1 Genbank gene 1713922 1716591 . + . ID=gene-IXO1088_008370;Name=IXO1088_008370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008370 CP040687.1 Protein Homology CDS 1713922 1716591 . + 0 ID=cds-QIE15389.1;Parent=gene-IXO1088_008370;Dbxref=NCBI_GP:QIE15389.1;Name=QIE15389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301826.1;locus_tag=IXO1088_008370;product=M1 family metallopeptidase;protein_id=QIE15389.1;transl_table=11 CP040687.1 Genbank pseudogene 1716886 1717366 . - . ID=gene-IXO1088_008375;Name=IXO1088_008375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008375;pseudo=true CP040687.1 Protein Homology CDS 1716886 1717366 . - 0 ID=cds-IXO1088_008375;Parent=gene-IXO1088_008375;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303997.1;locus_tag=IXO1088_008375;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1717471 1718436 . + . ID=gene-IXO1088_008380;Name=IXO1088_008380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008380 CP040687.1 Protein Homology CDS 1717471 1718436 . + 0 ID=cds-QIE15390.1;Parent=gene-IXO1088_008380;Dbxref=NCBI_GP:QIE15390.1;Name=QIE15390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_008380;product=IS1595-like element ISXo5 family transposase;protein_id=QIE15390.1;transl_table=11 CP040687.1 Genbank pseudogene 1718446 1718873 . - . ID=gene-IXO1088_008385;Name=IXO1088_008385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008385;pseudo=true CP040687.1 Protein Homology CDS 1718446 1718873 . - 0 ID=cds-IXO1088_008385;Parent=gene-IXO1088_008385;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303997.1;locus_tag=IXO1088_008385;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1719131 1719268 . + . ID=gene-IXO1088_008390;Name=IXO1088_008390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008390 CP040687.1 Protein Homology CDS 1719131 1719268 . + 0 ID=cds-QIE17924.1;Parent=gene-IXO1088_008390;Dbxref=NCBI_GP:QIE17924.1;Name=QIE17924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504365.1;locus_tag=IXO1088_008390;product=acetyltransferase;protein_id=QIE17924.1;transl_table=11 CP040687.1 Genbank pseudogene 1719265 1719627 . + . ID=gene-IXO1088_008395;Name=IXO1088_008395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008395;pseudo=true CP040687.1 Protein Homology CDS 1719265 1719627 . + 0 ID=cds-IXO1088_008395;Parent=gene-IXO1088_008395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159184.1;locus_tag=IXO1088_008395;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1719784 1720695 . + . ID=gene-IXO1088_008400;Name=IXO1088_008400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008400 CP040687.1 Protein Homology CDS 1719784 1720695 . + 0 ID=cds-QIE15391.1;Parent=gene-IXO1088_008400;Dbxref=NCBI_GP:QIE15391.1;Name=QIE15391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638511.1;locus_tag=IXO1088_008400;product=RNA methyltransferase;protein_id=QIE15391.1;transl_table=11 CP040687.1 Genbank pseudogene 1720704 1722213 . + . ID=gene-IXO1088_008405;Name=IXO1088_008405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008405;pseudo=true CP040687.1 Protein Homology CDS 1720704 1722213 . + 0 ID=cds-IXO1088_008405;Parent=gene-IXO1088_008405;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638510.1;locus_tag=IXO1088_008405;product=carboxylesterase family protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1722301 1723264 . - . ID=gene-IXO1088_008410;Name=IXO1088_008410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008410;pseudo=true CP040687.1 Protein Homology CDS 1722301 1723264 . - 0 ID=cds-IXO1088_008410;Parent=gene-IXO1088_008410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1088_008410;product=IS1595 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1723769 1724532 . + . ID=gene-IXO1088_008415;Name=IXO1088_008415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008415 CP040687.1 Protein Homology CDS 1723769 1724084 . + 0 ID=cds-QIE15392.1;Parent=gene-IXO1088_008415;Dbxref=NCBI_GP:QIE15392.1;Name=QIE15392.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_008415;product=IS5 family transposase;protein_id=QIE15392.1;transl_table=11 CP040687.1 Protein Homology CDS 1724084 1724532 . + 2 ID=cds-QIE15392.1;Parent=gene-IXO1088_008415;Dbxref=NCBI_GP:QIE15392.1;Name=QIE15392.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_008415;product=IS5 family transposase;protein_id=QIE15392.1;transl_table=11 CP040687.1 Genbank gene 1724594 1724669 . + . ID=gene-IXO1088_008420;Name=IXO1088_008420;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_008420 CP040687.1 cmsearch ncRNA 1724594 1724669 . + . ID=rna-IXO1088_008420;Parent=gene-IXO1088_008420;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_008420;product=sX9 sRNA CP040687.1 cmsearch exon 1724594 1724669 . + . ID=exon-IXO1088_008420-1;Parent=rna-IXO1088_008420;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_008420;product=sX9 sRNA CP040687.1 Genbank gene 1724664 1725086 . - . ID=gene-IXO1088_008425;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=IXO1088_008425 CP040687.1 Protein Homology CDS 1724664 1725086 . - 0 ID=cds-QIE15393.1;Parent=gene-IXO1088_008425;Dbxref=NCBI_GP:QIE15393.1;Name=QIE15393.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409130.1;locus_tag=IXO1088_008425;product=large-conductance mechanosensitive channel protein MscL;protein_id=QIE15393.1;transl_table=11 CP040687.1 Genbank gene 1725147 1725860 . - . ID=gene-IXO1088_008430;Name=IXO1088_008430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008430 CP040687.1 Protein Homology CDS 1725147 1725860 . - 0 ID=cds-QIE15394.1;Parent=gene-IXO1088_008430;Dbxref=NCBI_GP:QIE15394.1;Name=QIE15394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052181.1;locus_tag=IXO1088_008430;product=fumarylacetoacetate hydrolase family protein;protein_id=QIE15394.1;transl_table=11 CP040687.1 Genbank pseudogene 1726029 1727045 . - . ID=gene-IXO1088_008435;Name=IXO1088_008435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008435;pseudo=true CP040687.1 Protein Homology CDS 1726029 1727045 . - 0 ID=cds-IXO1088_008435;Parent=gene-IXO1088_008435;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229360.1;locus_tag=IXO1088_008435;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1727393 1728768 . - . ID=gene-IXO1088_008440;Name=IXO1088_008440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008440;pseudo=true CP040687.1 Protein Homology CDS 1727393 1728768 . - 0 ID=cds-IXO1088_008440;Parent=gene-IXO1088_008440;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1088_008440;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1728907 1729182 . - . ID=gene-IXO1088_008445;Name=IXO1088_008445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008445 CP040687.1 Protein Homology CDS 1728907 1729182 . - 0 ID=cds-QIE15395.1;Parent=gene-IXO1088_008445;Dbxref=NCBI_GP:QIE15395.1;Name=QIE15395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638500.1;locus_tag=IXO1088_008445;product=hypothetical protein;protein_id=QIE15395.1;transl_table=11 CP040687.1 Genbank gene 1729442 1729783 . + . ID=gene-IXO1088_008450;Name=IXO1088_008450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008450 CP040687.1 Protein Homology CDS 1729442 1729783 . + 0 ID=cds-QIE15396.1;Parent=gene-IXO1088_008450;Dbxref=NCBI_GP:QIE15396.1;Name=QIE15396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155445.1;locus_tag=IXO1088_008450;product=Rieske (2Fe-2S) protein;protein_id=QIE15396.1;transl_table=11 CP040687.1 Genbank gene 1729841 1731703 . - . ID=gene-IXO1088_008455;Name=IXO1088_008455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008455 CP040687.1 Protein Homology CDS 1729841 1731703 . - 0 ID=cds-QIE15397.1;Parent=gene-IXO1088_008455;Dbxref=NCBI_GP:QIE15397.1;Name=QIE15397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638498.1;locus_tag=IXO1088_008455;product=SLC13 family permease;protein_id=QIE15397.1;transl_table=11 CP040687.1 Genbank gene 1731779 1732537 . - . ID=gene-IXO1088_008460;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=IXO1088_008460 CP040687.1 Protein Homology CDS 1731779 1732537 . - 0 ID=cds-QIE15398.1;Parent=gene-IXO1088_008460;Dbxref=NCBI_GP:QIE15398.1;Name=QIE15398.1;gbkey=CDS;gene=trmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851486.1;locus_tag=IXO1088_008460;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=QIE15398.1;transl_table=11 CP040687.1 Genbank gene 1732553 1732846 . - . ID=gene-IXO1088_008465;Name=IXO1088_008465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008465 CP040687.1 Protein Homology CDS 1732553 1732846 . - 0 ID=cds-QIE15399.1;Parent=gene-IXO1088_008465;Dbxref=NCBI_GP:QIE15399.1;Name=QIE15399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259286.1;locus_tag=IXO1088_008465;product=hypothetical protein;protein_id=QIE15399.1;transl_table=11 CP040687.1 Genbank gene 1732839 1733633 . - . ID=gene-IXO1088_008470;Name=IXO1088_008470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008470 CP040687.1 Protein Homology CDS 1732839 1733633 . - 0 ID=cds-QIE15400.1;Parent=gene-IXO1088_008470;Dbxref=NCBI_GP:QIE15400.1;Name=QIE15400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638496.1;locus_tag=IXO1088_008470;product=thiazole synthase;protein_id=QIE15400.1;transl_table=11 CP040687.1 Genbank pseudogene 1733962 1734111 . - . ID=gene-IXO1088_008475;Name=IXO1088_008475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008475;pseudo=true CP040687.1 Protein Homology CDS 1733962 1734111 . - 0 ID=cds-IXO1088_008475;Parent=gene-IXO1088_008475;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258951.1;locus_tag=IXO1088_008475;product=pectate lyase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1734169 1734369 . - . ID=gene-IXO1088_008480;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=IXO1088_008480 CP040687.1 Protein Homology CDS 1734169 1734369 . - 0 ID=cds-QIE15401.1;Parent=gene-IXO1088_008480;Dbxref=NCBI_GP:QIE15401.1;Name=QIE15401.1;gbkey=CDS;gene=thiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638495.1;locus_tag=IXO1088_008480;product=sulfur carrier protein ThiS;protein_id=QIE15401.1;transl_table=11 CP040687.1 Genbank gene 1734560 1736344 . + . ID=gene-IXO1088_008485;Name=IXO1088_008485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008485 CP040687.1 Protein Homology CDS 1734560 1736344 . + 0 ID=cds-QIE17925.1;Parent=gene-IXO1088_008485;Dbxref=NCBI_GP:QIE17925.1;Name=QIE17925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638494.1;locus_tag=IXO1088_008485;product=autotransporter domain-containing esterase;protein_id=QIE17925.1;transl_table=11 CP040687.1 Genbank gene 1736461 1736534 . + . ID=gene-IXO1088_008490;Name=IXO1088_008490;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_008490 CP040687.1 tRNAscan-SE tRNA 1736461 1736534 . + . ID=rna-IXO1088_008490;Parent=gene-IXO1088_008490;anticodon=(pos:1736493..1736495);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_008490;product=tRNA-Gly CP040687.1 tRNAscan-SE exon 1736461 1736534 . + . ID=exon-IXO1088_008490-1;Parent=rna-IXO1088_008490;anticodon=(pos:1736493..1736495);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_008490;product=tRNA-Gly CP040687.1 Genbank gene 1736609 1736833 . - . ID=gene-IXO1088_008495;Name=IXO1088_008495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008495 CP040687.1 Protein Homology CDS 1736609 1736833 . - 0 ID=cds-QIE17926.1;Parent=gene-IXO1088_008495;Dbxref=NCBI_GP:QIE17926.1;Name=QIE17926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302952.1;locus_tag=IXO1088_008495;product=hypothetical protein;protein_id=QIE17926.1;transl_table=11 CP040687.1 Genbank pseudogene 1736926 1737886 . - . ID=gene-IXO1088_008500;Name=IXO1088_008500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008500;pseudo=true CP040687.1 Protein Homology CDS 1736926 1737886 . - 0 ID=cds-IXO1088_008500;Parent=gene-IXO1088_008500;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1088_008500;product=IS1595 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1738056 1738441 . - . ID=gene-IXO1088_008505;Name=IXO1088_008505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008505;pseudo=true CP040687.1 Protein Homology CDS 1738056 1738441 . - 0 ID=cds-IXO1088_008505;Parent=gene-IXO1088_008505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504348.1;locus_tag=IXO1088_008505;product=integrase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1738583 1739702 . + . ID=gene-IXO1088_008510;Name=IXO1088_008510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008510;pseudo=true CP040687.1 Protein Homology CDS 1738583 1739702 . + 0 ID=cds-IXO1088_008510;Parent=gene-IXO1088_008510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612143.1;locus_tag=IXO1088_008510;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1739737 1740441 . - . ID=gene-IXO1088_008515;Name=IXO1088_008515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008515;pseudo=true CP040687.1 Protein Homology CDS 1739737 1740441 . - 0 ID=cds-IXO1088_008515;Parent=gene-IXO1088_008515;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444837.1;locus_tag=IXO1088_008515;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1740473 1740583 . + . ID=gene-IXO1088_008520;Name=IXO1088_008520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008520;pseudo=true CP040687.1 Protein Homology CDS 1740473 1740583 . + 0 ID=cds-IXO1088_008520;Parent=gene-IXO1088_008520;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_008520;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1740810 1741202 . + . ID=gene-IXO1088_008525;Name=IXO1088_008525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008525 CP040687.1 Protein Homology CDS 1740810 1741202 . + 0 ID=cds-QIE15402.1;Parent=gene-IXO1088_008525;Dbxref=NCBI_GP:QIE15402.1;Name=QIE15402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017173974.1;locus_tag=IXO1088_008525;product=hypothetical protein;protein_id=QIE15402.1;transl_table=11 CP040687.1 Genbank gene 1741293 1741685 . + . ID=gene-IXO1088_008530;Name=IXO1088_008530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008530 CP040687.1 Protein Homology CDS 1741293 1741685 . + 0 ID=cds-QIE15403.1;Parent=gene-IXO1088_008530;Dbxref=NCBI_GP:QIE15403.1;Name=QIE15403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638457.1;locus_tag=IXO1088_008530;product=histone-like nucleoid-structuring protein;protein_id=QIE15403.1;transl_table=11 CP040687.1 Genbank gene 1741718 1742468 . - . ID=gene-IXO1088_008535;Name=IXO1088_008535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008535 CP040687.1 Protein Homology CDS 1742256 1742468 . - 0 ID=cds-QIE15404.1;Parent=gene-IXO1088_008535;Dbxref=NCBI_GP:QIE15404.1;Name=QIE15404.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612132.1;locus_tag=IXO1088_008535;product=IS5 family transposase;protein_id=QIE15404.1;transl_table=11 CP040687.1 Protein Homology CDS 1741718 1742254 . - 0 ID=cds-QIE15404.1;Parent=gene-IXO1088_008535;Dbxref=NCBI_GP:QIE15404.1;Name=QIE15404.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612132.1;locus_tag=IXO1088_008535;product=IS5 family transposase;protein_id=QIE15404.1;transl_table=11 CP040687.1 Genbank gene 1742469 1743425 . - . ID=gene-IXO1088_008540;Name=IXO1088_008540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008540 CP040687.1 Protein Homology CDS 1742469 1743425 . - 0 ID=cds-QIE15405.1;Parent=gene-IXO1088_008540;Dbxref=NCBI_GP:QIE15405.1;Name=QIE15405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1088_008540;product=IS30-like element IS1112b family transposase;protein_id=QIE15405.1;transl_table=11 CP040687.1 Genbank pseudogene 1743519 1745207 . + . ID=gene-IXO1088_008545;Name=IXO1088_008545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008545;pseudo=true CP040687.1 Protein Homology CDS 1743519 1745207 . + 0 ID=cds-IXO1088_008545;Parent=gene-IXO1088_008545;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408102.1;locus_tag=IXO1088_008545;product=RHS repeat protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1745107 1746208 . + . ID=gene-IXO1088_008550;Name=IXO1088_008550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008550;pseudo=true CP040687.1 Protein Homology CDS 1745107 1746208 . + 0 ID=cds-IXO1088_008550;Parent=gene-IXO1088_008550;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=IXO1088_008550;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1746251 1747049 . + . ID=gene-IXO1088_008555;Name=IXO1088_008555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008555 CP040687.1 Protein Homology CDS 1746251 1746522 . + 0 ID=cds-QIE15406.1;Parent=gene-IXO1088_008555;Dbxref=NCBI_GP:QIE15406.1;Name=QIE15406.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_008555;product=IS5 family transposase;protein_id=QIE15406.1;transl_table=11 CP040687.1 Protein Homology CDS 1746521 1747049 . + 1 ID=cds-QIE15406.1;Parent=gene-IXO1088_008555;Dbxref=NCBI_GP:QIE15406.1;Name=QIE15406.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_008555;product=IS5 family transposase;protein_id=QIE15406.1;transl_table=11 CP040687.1 Genbank pseudogene 1747087 1748679 . - . ID=gene-IXO1088_008560;Name=IXO1088_008560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008560;pseudo=true CP040687.1 Protein Homology CDS 1747087 1748679 . - 0 ID=cds-IXO1088_008560;Parent=gene-IXO1088_008560;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444487.1;locus_tag=IXO1088_008560;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1748676 1748879 . - . ID=gene-IXO1088_008565;Name=IXO1088_008565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008565;pseudo=true CP040687.1 Protein Homology CDS 1748676 1748879 . - 0 ID=cds-IXO1088_008565;Parent=gene-IXO1088_008565;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444637.1;locus_tag=IXO1088_008565;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1748950 1751505 . - . ID=gene-IXO1088_008570;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=IXO1088_008570 CP040687.1 Protein Homology CDS 1748950 1751505 . - 0 ID=cds-QIE15407.1;Parent=gene-IXO1088_008570;Dbxref=NCBI_GP:QIE15407.1;Name=QIE15407.1;gbkey=CDS;gene=mutS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484195.1;locus_tag=IXO1088_008570;product=DNA mismatch repair protein MutS;protein_id=QIE15407.1;transl_table=11 CP040687.1 Genbank pseudogene 1751678 1752153 . + . ID=gene-IXO1088_008575;Name=IXO1088_008575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008575;pseudo=true CP040687.1 Protein Homology CDS 1751678 1752153 . + 0 ID=cds-IXO1088_008575;Parent=gene-IXO1088_008575;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019659254.1;locus_tag=IXO1088_008575;product=integrase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1752274 1753375 . - . ID=gene-IXO1088_008580;Name=IXO1088_008580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008580;pseudo=true CP040687.1 Protein Homology CDS 1752274 1753375 . - 0 ID=cds-IXO1088_008580;Parent=gene-IXO1088_008580;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=IXO1088_008580;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1753344 1753466 . + . ID=gene-IXO1088_008585;Name=IXO1088_008585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008585;pseudo=true CP040687.1 Protein Homology CDS 1753344 1753466 . + 0 ID=cds-IXO1088_008585;Parent=gene-IXO1088_008585;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166331.1;locus_tag=IXO1088_008585;product=carboxypeptidase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1753445 1754097 . + . ID=gene-IXO1088_008590;Name=IXO1088_008590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008590;pseudo=true CP040687.1 Protein Homology CDS 1753445 1754097 . + 0 ID=cds-IXO1088_008590;Parent=gene-IXO1088_008590;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_008590;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1754478 1755872 . - . ID=gene-IXO1088_008595;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=IXO1088_008595 CP040687.1 Protein Homology CDS 1754478 1755872 . - 0 ID=cds-QIE15408.1;Parent=gene-IXO1088_008595;Dbxref=NCBI_GP:QIE15408.1;Name=QIE15408.1;gbkey=CDS;gene=radA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636538.2;locus_tag=IXO1088_008595;product=DNA repair protein RadA;protein_id=QIE15408.1;transl_table=11 CP040687.1 Genbank pseudogene 1755955 1757056 . - . ID=gene-IXO1088_008600;Name=IXO1088_008600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008600;pseudo=true CP040687.1 Protein Homology CDS 1755955 1757056 . - 0 ID=cds-IXO1088_008600;Parent=gene-IXO1088_008600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1088_008600;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1757025 1757156 . + . ID=gene-IXO1088_008605;Name=IXO1088_008605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008605;pseudo=true CP040687.1 Protein Homology CDS 1757025 1757156 . + 0 ID=cds-IXO1088_008605;Parent=gene-IXO1088_008605;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166331.1;locus_tag=IXO1088_008605;product=carboxypeptidase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1757261 1758817 . + . ID=gene-IXO1088_008610;Name=IXO1088_008610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008610;pseudo=true CP040687.1 Protein Homology CDS 1757261 1758817 . + 0 ID=cds-IXO1088_008610;Parent=gene-IXO1088_008610;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156664.1;locus_tag=IXO1088_008610;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1759081 1761230 . - . ID=gene-IXO1088_008615;Name=IXO1088_008615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008615;pseudo=true CP040687.1 Protein Homology CDS 1759081 1761230 . - 0 ID=cds-IXO1088_008615;Parent=gene-IXO1088_008615;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118433.1;locus_tag=IXO1088_008615;product=phospholipase C%2C phosphocholine-specific;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1761401 1762639 . - . ID=gene-IXO1088_008620;Name=IXO1088_008620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008620 CP040687.1 Protein Homology CDS 1761401 1762639 . - 0 ID=cds-QIE15409.1;Parent=gene-IXO1088_008620;Dbxref=NCBI_GP:QIE15409.1;Name=QIE15409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363943.1;locus_tag=IXO1088_008620;product=MFS transporter;protein_id=QIE15409.1;transl_table=11 CP040687.1 Genbank gene 1763080 1763373 . + . ID=gene-IXO1088_008625;Name=IXO1088_008625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008625 CP040687.1 Protein Homology CDS 1763080 1763373 . + 0 ID=cds-QIE15410.1;Parent=gene-IXO1088_008625;Dbxref=NCBI_GP:QIE15410.1;Name=QIE15410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638380.1;locus_tag=IXO1088_008625;product=zinc ribbon domain-containing protein;protein_id=QIE15410.1;transl_table=11 CP040687.1 Genbank gene 1763871 1764647 . - . ID=gene-IXO1088_008630;Name=IXO1088_008630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008630 CP040687.1 Protein Homology CDS 1763871 1764647 . - 0 ID=cds-QIE15411.1;Parent=gene-IXO1088_008630;Dbxref=NCBI_GP:QIE15411.1;Name=QIE15411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638378.1;locus_tag=IXO1088_008630;product=DUF3011 domain-containing protein;protein_id=QIE15411.1;transl_table=11 CP040687.1 Genbank gene 1764805 1766571 . + . ID=gene-IXO1088_008635;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=IXO1088_008635 CP040687.1 Protein Homology CDS 1764805 1766571 . + 0 ID=cds-QIE15412.1;Parent=gene-IXO1088_008635;Dbxref=NCBI_GP:QIE15412.1;Name=QIE15412.1;gbkey=CDS;gene=aspS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913642.1;locus_tag=IXO1088_008635;product=aspartate--tRNA ligase;protein_id=QIE15412.1;transl_table=11 CP040687.1 Genbank gene 1766595 1766879 . - . ID=gene-IXO1088_008640;Name=IXO1088_008640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008640 CP040687.1 Protein Homology CDS 1766595 1766879 . - 0 ID=cds-QIE15413.1;Parent=gene-IXO1088_008640;Dbxref=NCBI_GP:QIE15413.1;Name=QIE15413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302498.1;locus_tag=IXO1088_008640;product=hypothetical protein;protein_id=QIE15413.1;transl_table=11 CP040687.1 Genbank gene 1767083 1767610 . + . ID=gene-IXO1088_008645;Name=IXO1088_008645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008645 CP040687.1 Protein Homology CDS 1767083 1767610 . + 0 ID=cds-QIE15414.1;Parent=gene-IXO1088_008645;Dbxref=NCBI_GP:QIE15414.1;Name=QIE15414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504183.1;locus_tag=IXO1088_008645;product=GNAT family N-acetyltransferase;protein_id=QIE15414.1;transl_table=11 CP040687.1 Genbank gene 1767710 1768387 . + . ID=gene-IXO1088_008650;Name=IXO1088_008650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008650 CP040687.1 Protein Homology CDS 1767710 1768387 . + 0 ID=cds-QIE15415.1;Parent=gene-IXO1088_008650;Dbxref=NCBI_GP:QIE15415.1;Name=QIE15415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112578.1;locus_tag=IXO1088_008650;product=alpha/beta hydrolase;protein_id=QIE15415.1;transl_table=11 CP040687.1 Genbank gene 1768477 1769205 . + . ID=gene-IXO1088_008655;Name=IXO1088_008655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008655 CP040687.1 Protein Homology CDS 1768477 1769205 . + 0 ID=cds-QIE15416.1;Parent=gene-IXO1088_008655;Dbxref=NCBI_GP:QIE15416.1;Name=QIE15416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638374.1;locus_tag=IXO1088_008655;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=QIE15416.1;transl_table=11 CP040687.1 Genbank gene 1769320 1769844 . + . ID=gene-IXO1088_008660;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=IXO1088_008660 CP040687.1 Protein Homology CDS 1769320 1769844 . + 0 ID=cds-QIE15417.1;Parent=gene-IXO1088_008660;Dbxref=NCBI_GP:QIE15417.1;Name=QIE15417.1;gbkey=CDS;gene=ruvC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638373.1;locus_tag=IXO1088_008660;product=crossover junction endodeoxyribonuclease RuvC;protein_id=QIE15417.1;transl_table=11 CP040687.1 Genbank gene 1770002 1770586 . + . ID=gene-IXO1088_008665;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=IXO1088_008665 CP040687.1 Protein Homology CDS 1770002 1770586 . + 0 ID=cds-QIE15418.1;Parent=gene-IXO1088_008665;Dbxref=NCBI_GP:QIE15418.1;Name=QIE15418.1;gbkey=CDS;gene=ruvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258432.1;locus_tag=IXO1088_008665;product=Holliday junction branch migration protein RuvA;protein_id=QIE15418.1;transl_table=11 CP040687.1 Genbank gene 1770786 1772693 . + . ID=gene-IXO1088_008670;Name=IXO1088_008670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008670 CP040687.1 Protein Homology CDS 1770786 1772693 . + 0 ID=cds-QIE15419.1;Parent=gene-IXO1088_008670;Dbxref=NCBI_GP:QIE15419.1;Name=QIE15419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638371.1;locus_tag=IXO1088_008670;product=potassium transporter Kup;protein_id=QIE15419.1;transl_table=11 CP040687.1 Genbank gene 1772822 1773859 . + . ID=gene-IXO1088_008675;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=IXO1088_008675 CP040687.1 Protein Homology CDS 1772822 1773859 . + 0 ID=cds-QIE15420.1;Parent=gene-IXO1088_008675;Dbxref=NCBI_GP:QIE15420.1;Name=QIE15420.1;gbkey=CDS;gene=ruvB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363979.1;locus_tag=IXO1088_008675;product=Holliday junction branch migration DNA helicase RuvB;protein_id=QIE15420.1;transl_table=11 CP040687.1 Genbank gene 1773912 1774370 . + . ID=gene-IXO1088_008680;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=IXO1088_008680 CP040687.1 Protein Homology CDS 1773912 1774370 . + 0 ID=cds-QIE15421.1;Parent=gene-IXO1088_008680;Dbxref=NCBI_GP:QIE15421.1;Name=QIE15421.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638369.1;locus_tag=IXO1088_008680;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=QIE15421.1;transl_table=11 CP040687.1 Genbank gene 1774382 1775161 . + . ID=gene-IXO1088_008685;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=IXO1088_008685 CP040687.1 Protein Homology CDS 1774382 1775161 . + 0 ID=cds-QIE15422.1;Parent=gene-IXO1088_008685;Dbxref=NCBI_GP:QIE15422.1;Name=QIE15422.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638368.1;locus_tag=IXO1088_008685;product=protein TolQ;protein_id=QIE15422.1;transl_table=11 CP040687.1 Genbank gene 1775318 1775767 . + . ID=gene-IXO1088_008690;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=IXO1088_008690 CP040687.1 Protein Homology CDS 1775318 1775767 . + 0 ID=cds-QIE15423.1;Parent=gene-IXO1088_008690;Dbxref=NCBI_GP:QIE15423.1;Name=QIE15423.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638367.1;locus_tag=IXO1088_008690;product=protein TolR;protein_id=QIE15423.1;transl_table=11 CP040687.1 Genbank gene 1775757 1776797 . + . ID=gene-IXO1088_008695;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=IXO1088_008695 CP040687.1 Protein Homology CDS 1775757 1776797 . + 0 ID=cds-QIE15424.1;Parent=gene-IXO1088_008695;Dbxref=NCBI_GP:QIE15424.1;Name=QIE15424.1;gbkey=CDS;gene=tolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638366.1;locus_tag=IXO1088_008695;product=cell envelope integrity protein TolA;protein_id=QIE15424.1;transl_table=11 CP040687.1 Genbank gene 1777057 1778376 . + . ID=gene-IXO1088_008700;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=IXO1088_008700 CP040687.1 Protein Homology CDS 1777057 1778376 . + 0 ID=cds-QIE15425.1;Parent=gene-IXO1088_008700;Dbxref=NCBI_GP:QIE15425.1;Name=QIE15425.1;gbkey=CDS;gene=tolB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638365.1;locus_tag=IXO1088_008700;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=QIE15425.1;transl_table=11 CP040687.1 Genbank gene 1778434 1778952 . + . ID=gene-IXO1088_008705;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=IXO1088_008705 CP040687.1 Protein Homology CDS 1778434 1778952 . + 0 ID=cds-QIE15426.1;Parent=gene-IXO1088_008705;Dbxref=NCBI_GP:QIE15426.1;Name=QIE15426.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638364.1;locus_tag=IXO1088_008705;product=peptidoglycan-associated lipoprotein Pal;protein_id=QIE15426.1;transl_table=11 CP040687.1 Genbank gene 1778959 1779777 . + . ID=gene-IXO1088_008710;Name=ybgF;gbkey=Gene;gene=ybgF;gene_biotype=protein_coding;locus_tag=IXO1088_008710 CP040687.1 Protein Homology CDS 1778959 1779777 . + 0 ID=cds-QIE15427.1;Parent=gene-IXO1088_008710;Dbxref=NCBI_GP:QIE15427.1;Name=QIE15427.1;gbkey=CDS;gene=ybgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638363.1;locus_tag=IXO1088_008710;product=tol-pal system protein YbgF;protein_id=QIE15427.1;transl_table=11 CP040687.1 Genbank gene 1779820 1780503 . + . ID=gene-IXO1088_008715;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=IXO1088_008715 CP040687.1 Protein Homology CDS 1779820 1780503 . + 0 ID=cds-QIE15428.1;Parent=gene-IXO1088_008715;Dbxref=NCBI_GP:QIE15428.1;Name=QIE15428.1;gbkey=CDS;gene=queE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638362.1;locus_tag=IXO1088_008715;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=QIE15428.1;transl_table=11 CP040687.1 Genbank gene 1780623 1781858 . + . ID=gene-IXO1088_008720;Name=IXO1088_008720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008720 CP040687.1 Protein Homology CDS 1780623 1781858 . + 0 ID=cds-QIE15429.1;Parent=gene-IXO1088_008720;Dbxref=NCBI_GP:QIE15429.1;Name=QIE15429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1088_008720;product=ISL3-like element ISXoo13 family transposase;protein_id=QIE15429.1;transl_table=11 CP040687.1 Genbank gene 1781909 1782672 . - . ID=gene-IXO1088_008725;Name=IXO1088_008725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008725 CP040687.1 Protein Homology CDS 1782357 1782672 . - 0 ID=cds-QIE15430.1;Parent=gene-IXO1088_008725;Dbxref=NCBI_GP:QIE15430.1;Name=QIE15430.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_008725;product=IS5 family transposase;protein_id=QIE15430.1;transl_table=11 CP040687.1 Protein Homology CDS 1781909 1782357 . - 2 ID=cds-QIE15430.1;Parent=gene-IXO1088_008725;Dbxref=NCBI_GP:QIE15430.1;Name=QIE15430.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_008725;product=IS5 family transposase;protein_id=QIE15430.1;transl_table=11 CP040687.1 Genbank pseudogene 1782739 1784115 . - . ID=gene-IXO1088_008730;Name=IXO1088_008730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008730;pseudo=true CP040687.1 Protein Homology CDS 1782739 1784115 . - 0 ID=cds-IXO1088_008730;Parent=gene-IXO1088_008730;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1088_008730;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1784307 1784383 . + . ID=gene-IXO1088_008735;Name=IXO1088_008735;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_008735 CP040687.1 cmsearch ncRNA 1784307 1784383 . + . ID=rna-IXO1088_008735;Parent=gene-IXO1088_008735;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_008735;product=sX9 sRNA CP040687.1 cmsearch exon 1784307 1784383 . + . ID=exon-IXO1088_008735-1;Parent=rna-IXO1088_008735;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_008735;product=sX9 sRNA CP040687.1 Genbank gene 1784494 1785168 . + . ID=gene-IXO1088_008740;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=IXO1088_008740 CP040687.1 Protein Homology CDS 1784494 1785168 . + 0 ID=cds-QIE15431.1;Parent=gene-IXO1088_008740;Dbxref=NCBI_GP:QIE15431.1;Name=QIE15431.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638361.1;locus_tag=IXO1088_008740;product=7-cyano-7-deazaguanine synthase QueC;protein_id=QIE15431.1;transl_table=11 CP040687.1 Genbank gene 1785216 1785291 . + . ID=gene-IXO1088_008745;Name=IXO1088_008745;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_008745 CP040687.1 tRNAscan-SE tRNA 1785216 1785291 . + . ID=rna-IXO1088_008745;Parent=gene-IXO1088_008745;anticodon=(pos:1785249..1785251);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_008745;product=tRNA-Lys CP040687.1 tRNAscan-SE exon 1785216 1785291 . + . ID=exon-IXO1088_008745-1;Parent=rna-IXO1088_008745;anticodon=(pos:1785249..1785251);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_008745;product=tRNA-Lys CP040687.1 Genbank pseudogene 1785438 1785586 . - . ID=gene-IXO1088_008750;Name=IXO1088_008750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008750;pseudo=true CP040687.1 Protein Homology CDS 1785438 1785586 . - 0 ID=cds-IXO1088_008750;Parent=gene-IXO1088_008750;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638360.1;locus_tag=IXO1088_008750;product=integrase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1785799 1786203 . - . ID=gene-IXO1088_008755;Name=IXO1088_008755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008755 CP040687.1 Protein Homology CDS 1785799 1786203 . - 0 ID=cds-QIE15432.1;Parent=gene-IXO1088_008755;Dbxref=NCBI_GP:QIE15432.1;Name=QIE15432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638297.1;locus_tag=IXO1088_008755;product=response regulator;protein_id=QIE15432.1;transl_table=11 CP040687.1 Genbank gene 1786282 1786779 . - . ID=gene-IXO1088_008760;Name=IXO1088_008760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008760 CP040687.1 Protein Homology CDS 1786282 1786779 . - 0 ID=cds-QIE15433.1;Parent=gene-IXO1088_008760;Dbxref=NCBI_GP:QIE15433.1;Name=QIE15433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638296.1;locus_tag=IXO1088_008760;product=hypothetical protein;protein_id=QIE15433.1;transl_table=11 CP040687.1 Genbank gene 1786918 1788714 . - . ID=gene-IXO1088_008765;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=IXO1088_008765 CP040687.1 Protein Homology CDS 1786918 1788714 . - 0 ID=cds-QIE15434.1;Parent=gene-IXO1088_008765;Dbxref=NCBI_GP:QIE15434.1;Name=QIE15434.1;gbkey=CDS;gene=recQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638295.1;locus_tag=IXO1088_008765;product=DNA helicase RecQ;protein_id=QIE15434.1;transl_table=11 CP040687.1 Genbank gene 1789262 1789807 . - . ID=gene-IXO1088_008770;Name=IXO1088_008770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008770 CP040687.1 Protein Homology CDS 1789262 1789807 . - 0 ID=cds-QIE15435.1;Parent=gene-IXO1088_008770;Dbxref=NCBI_GP:QIE15435.1;Name=QIE15435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638294.1;locus_tag=IXO1088_008770;product=DNA starvation/stationary phase protection protein;protein_id=QIE15435.1;transl_table=11 CP040687.1 Genbank gene 1789909 1794030 . + . ID=gene-IXO1088_008775;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=IXO1088_008775 CP040687.1 Protein Homology CDS 1789909 1794030 . + 0 ID=cds-QIE15436.1;Parent=gene-IXO1088_008775;Dbxref=NCBI_GP:QIE15436.1;Name=QIE15436.1;gbkey=CDS;gene=hrpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303863.1;locus_tag=IXO1088_008775;product=ATP-dependent RNA helicase HrpA;protein_id=QIE15436.1;transl_table=11 CP040687.1 Genbank gene 1794251 1796905 . - . ID=gene-IXO1088_008780;Name=IXO1088_008780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008780 CP040687.1 Protein Homology CDS 1794251 1796905 . - 0 ID=cds-QIE15437.1;Parent=gene-IXO1088_008780;Dbxref=NCBI_GP:QIE15437.1;Name=QIE15437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638292.1;locus_tag=IXO1088_008780;product=TonB-dependent receptor;protein_id=QIE15437.1;transl_table=11 CP040687.1 Genbank pseudogene 1797007 1798046 . - . ID=gene-IXO1088_008785;Name=IXO1088_008785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008785;pseudo=true CP040687.1 Protein Homology CDS 1797007 1798046 . - 0 ID=cds-IXO1088_008785;Parent=gene-IXO1088_008785;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052049.1;locus_tag=IXO1088_008785;product=glucokinase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1798347 1799861 . - . ID=gene-IXO1088_008790;Name=IXO1088_008790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008790 CP040687.1 Protein Homology CDS 1798347 1799861 . - 0 ID=cds-QIE15438.1;Parent=gene-IXO1088_008790;Dbxref=NCBI_GP:QIE15438.1;Name=QIE15438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159318.1;locus_tag=IXO1088_008790;product=PhoPQ-regulated protein;protein_id=QIE15438.1;transl_table=11 CP040687.1 Genbank gene 1800290 1800802 . - . ID=gene-IXO1088_008795;Name=IXO1088_008795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008795 CP040687.1 Protein Homology CDS 1800290 1800802 . - 0 ID=cds-QIE15439.1;Parent=gene-IXO1088_008795;Dbxref=NCBI_GP:QIE15439.1;Name=QIE15439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638289.1;locus_tag=IXO1088_008795;product=hypothetical protein;protein_id=QIE15439.1;transl_table=11 CP040687.1 Genbank gene 1800865 1801983 . - . ID=gene-IXO1088_008800;Name=pqqE;gbkey=Gene;gene=pqqE;gene_biotype=protein_coding;locus_tag=IXO1088_008800 CP040687.1 Protein Homology CDS 1800865 1801983 . - 0 ID=cds-QIE15440.1;Parent=gene-IXO1088_008800;Dbxref=NCBI_GP:QIE15440.1;Name=QIE15440.1;gbkey=CDS;gene=pqqE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160183.1;locus_tag=IXO1088_008800;product=pyrroloquinoline quinone biosynthesis protein PqqE;protein_id=QIE15440.1;transl_table=11 CP040687.1 Genbank gene 1801980 1802258 . - . ID=gene-IXO1088_008805;Name=pqqD;gbkey=Gene;gene=pqqD;gene_biotype=protein_coding;locus_tag=IXO1088_008805 CP040687.1 Protein Homology CDS 1801980 1802258 . - 0 ID=cds-QIE15441.1;Parent=gene-IXO1088_008805;Dbxref=NCBI_GP:QIE15441.1;Name=QIE15441.1;gbkey=CDS;gene=pqqD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638287.1;locus_tag=IXO1088_008805;product=pyrroloquinoline quinone biosynthesis peptide chaperone PqqD;protein_id=QIE15441.1;transl_table=11 CP040687.1 Genbank gene 1802255 1803007 . - . ID=gene-IXO1088_008810;Name=pqqC;gbkey=Gene;gene=pqqC;gene_biotype=protein_coding;locus_tag=IXO1088_008810 CP040687.1 Protein Homology CDS 1802255 1803007 . - 0 ID=cds-QIE15442.1;Parent=gene-IXO1088_008810;Dbxref=NCBI_GP:QIE15442.1;Name=QIE15442.1;gbkey=CDS;gene=pqqC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638286.1;locus_tag=IXO1088_008810;product=pyrroloquinoline-quinone synthase PqqC;protein_id=QIE15442.1;transl_table=11 CP040687.1 Genbank gene 1803004 1803903 . - . ID=gene-IXO1088_008815;Name=pqqB;gbkey=Gene;gene=pqqB;gene_biotype=protein_coding;locus_tag=IXO1088_008815 CP040687.1 Protein Homology CDS 1803004 1803903 . - 0 ID=cds-QIE15443.1;Parent=gene-IXO1088_008815;Dbxref=NCBI_GP:QIE15443.1;Name=QIE15443.1;gbkey=CDS;gene=pqqB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638285.1;locus_tag=IXO1088_008815;product=pyrroloquinoline quinone biosynthesis protein PqqB;protein_id=QIE15443.1;transl_table=11 CP040687.1 Genbank gene 1803987 1804067 . - . ID=gene-IXO1088_008820;Name=pqqA;gbkey=Gene;gene=pqqA;gene_biotype=protein_coding;locus_tag=IXO1088_008820 CP040687.1 Protein Homology CDS 1803987 1804067 . - 0 ID=cds-QIE17927.1;Parent=gene-IXO1088_008820;Dbxref=NCBI_GP:QIE17927.1;Name=QIE17927.1;gbkey=CDS;gene=pqqA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812057.1;locus_tag=IXO1088_008820;product=pyrroloquinoline quinone precursor peptide PqqA;protein_id=QIE17927.1;transl_table=11 CP040687.1 Genbank gene 1804357 1806543 . + . ID=gene-IXO1088_008825;Name=IXO1088_008825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008825 CP040687.1 Protein Homology CDS 1804357 1806543 . + 0 ID=cds-QIE15444.1;Parent=gene-IXO1088_008825;Dbxref=NCBI_GP:QIE15444.1;Name=QIE15444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090786.1;locus_tag=IXO1088_008825;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=QIE15444.1;transl_table=11 CP040687.1 Genbank gene 1806875 1808317 . + . ID=gene-IXO1088_008830;Name=IXO1088_008830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008830 CP040687.1 Protein Homology CDS 1806875 1808317 . + 0 ID=cds-QIE17928.1;Parent=gene-IXO1088_008830;Dbxref=NCBI_GP:QIE17928.1;Name=QIE17928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913689.1;locus_tag=IXO1088_008830;product=hypothetical protein;protein_id=QIE17928.1;transl_table=11 CP040687.1 Genbank gene 1808650 1810752 . - . ID=gene-IXO1088_008835;Name=IXO1088_008835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008835 CP040687.1 Protein Homology CDS 1808650 1810752 . - 0 ID=cds-QIE15445.1;Parent=gene-IXO1088_008835;Dbxref=NCBI_GP:QIE15445.1;Name=QIE15445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113094.1;locus_tag=IXO1088_008835;product=glycosyltransferase;protein_id=QIE15445.1;transl_table=11 CP040687.1 Genbank gene 1810994 1813438 . + . ID=gene-IXO1088_008840;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=IXO1088_008840 CP040687.1 Protein Homology CDS 1810994 1813438 . + 0 ID=cds-QIE15446.1;Parent=gene-IXO1088_008840;Dbxref=NCBI_GP:QIE15446.1;Name=QIE15446.1;gbkey=CDS;gene=mrcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638280.1;locus_tag=IXO1088_008840;product=penicillin-binding protein 1B;protein_id=QIE15446.1;transl_table=11 CP040687.1 Genbank gene 1813452 1813976 . + . ID=gene-IXO1088_008845;Name=IXO1088_008845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008845 CP040687.1 Protein Homology CDS 1813452 1813976 . + 0 ID=cds-QIE15447.1;Parent=gene-IXO1088_008845;Dbxref=NCBI_GP:QIE15447.1;Name=QIE15447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638279.1;locus_tag=IXO1088_008845;product=hypothetical protein;protein_id=QIE15447.1;transl_table=11 CP040687.1 Genbank gene 1814178 1816205 . + . ID=gene-IXO1088_008850;Name=IXO1088_008850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008850 CP040687.1 Protein Homology CDS 1814178 1816205 . + 0 ID=cds-QIE15448.1;Parent=gene-IXO1088_008850;Dbxref=NCBI_GP:QIE15448.1;Name=QIE15448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364197.1;locus_tag=IXO1088_008850;product=ATP-dependent DNA helicase;protein_id=QIE15448.1;transl_table=11 CP040687.1 Genbank gene 1816219 1816938 . + . ID=gene-IXO1088_008855;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=IXO1088_008855 CP040687.1 Protein Homology CDS 1816219 1816938 . + 0 ID=cds-QIE15449.1;Parent=gene-IXO1088_008855;Dbxref=NCBI_GP:QIE15449.1;Name=QIE15449.1;gbkey=CDS;gene=tsaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010375169.1;locus_tag=IXO1088_008855;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=QIE15449.1;transl_table=11 CP040687.1 Genbank gene 1816901 1817851 . + . ID=gene-IXO1088_008860;Name=IXO1088_008860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008860 CP040687.1 Protein Homology CDS 1816901 1817851 . + 0 ID=cds-QIE17929.1;Parent=gene-IXO1088_008860;Dbxref=NCBI_GP:QIE17929.1;Name=QIE17929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904593.1;locus_tag=IXO1088_008860;product=ADP-ribosylglycohydrolase family protein;protein_id=QIE17929.1;transl_table=11 CP040687.1 Genbank gene 1818145 1819020 . - . ID=gene-IXO1088_008865;Name=IXO1088_008865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008865 CP040687.1 Protein Homology CDS 1818145 1819020 . - 0 ID=cds-QIE15450.1;Parent=gene-IXO1088_008865;Dbxref=NCBI_GP:QIE15450.1;Name=QIE15450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638275.1;locus_tag=IXO1088_008865;product=energy transducer TonB;protein_id=QIE15450.1;transl_table=11 CP040687.1 Genbank gene 1819017 1819967 . - . ID=gene-IXO1088_008870;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=IXO1088_008870 CP040687.1 Protein Homology CDS 1819017 1819967 . - 0 ID=cds-QIE15451.1;Parent=gene-IXO1088_008870;Dbxref=NCBI_GP:QIE15451.1;Name=QIE15451.1;gbkey=CDS;gene=gshB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638274.1;locus_tag=IXO1088_008870;product=glutathione synthase;protein_id=QIE15451.1;transl_table=11 CP040687.1 Genbank gene 1820217 1820618 . + . ID=gene-IXO1088_008875;Name=IXO1088_008875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008875 CP040687.1 Protein Homology CDS 1820217 1820618 . + 0 ID=cds-QIE17930.1;Parent=gene-IXO1088_008875;Dbxref=NCBI_GP:QIE17930.1;Name=QIE17930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638273.1;locus_tag=IXO1088_008875;product=response regulator;protein_id=QIE17930.1;transl_table=11 CP040687.1 Genbank gene 1820636 1820998 . + . ID=gene-IXO1088_008880;Name=IXO1088_008880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008880 CP040687.1 Protein Homology CDS 1820636 1820998 . + 0 ID=cds-QIE15452.1;Parent=gene-IXO1088_008880;Dbxref=NCBI_GP:QIE15452.1;Name=QIE15452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638272.1;locus_tag=IXO1088_008880;product=response regulator;protein_id=QIE15452.1;transl_table=11 CP040687.1 Genbank gene 1820998 1821528 . + . ID=gene-IXO1088_008885;Name=IXO1088_008885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008885 CP040687.1 Protein Homology CDS 1820998 1821528 . + 0 ID=cds-QIE15453.1;Parent=gene-IXO1088_008885;Dbxref=NCBI_GP:QIE15453.1;Name=QIE15453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508568.1;locus_tag=IXO1088_008885;product=chemotaxis protein CheW;protein_id=QIE15453.1;transl_table=11 CP040687.1 Genbank gene 1821568 1823604 . + . ID=gene-IXO1088_008890;Name=IXO1088_008890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008890 CP040687.1 Protein Homology CDS 1821568 1823604 . + 0 ID=cds-QIE15454.1;Parent=gene-IXO1088_008890;Dbxref=NCBI_GP:QIE15454.1;Name=QIE15454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638270.1;locus_tag=IXO1088_008890;product=methyl-accepting chemotaxis protein;protein_id=QIE15454.1;transl_table=11 CP040687.1 Genbank gene 1823718 1830644 . + . ID=gene-IXO1088_008895;Name=IXO1088_008895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008895 CP040687.1 Protein Homology CDS 1823718 1830644 . + 0 ID=cds-QIE15455.1;Parent=gene-IXO1088_008895;Dbxref=NCBI_GP:QIE15455.1;Name=QIE15455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158585.1;locus_tag=IXO1088_008895;product=response regulator;protein_id=QIE15455.1;transl_table=11 CP040687.1 Genbank gene 1830652 1831854 . + . ID=gene-IXO1088_008900;Name=IXO1088_008900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008900 CP040687.1 Protein Homology CDS 1830652 1831854 . + 0 ID=cds-QIE17931.1;Parent=gene-IXO1088_008900;Dbxref=NCBI_GP:QIE17931.1;Name=QIE17931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638268.1;locus_tag=IXO1088_008900;product=chemotaxis protein;protein_id=QIE17931.1;transl_table=11 CP040687.1 Genbank gene 1831888 1832364 . + . ID=gene-IXO1088_008905;Name=IXO1088_008905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008905 CP040687.1 Protein Homology CDS 1831888 1832364 . + 0 ID=cds-QIE15456.1;Parent=gene-IXO1088_008905;Dbxref=NCBI_GP:QIE15456.1;Name=QIE15456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638267.1;locus_tag=IXO1088_008905;product=chemotaxis protein CheW;protein_id=QIE15456.1;transl_table=11 CP040687.1 Genbank gene 1832615 1833238 . + . ID=gene-IXO1088_008910;Name=IXO1088_008910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008910 CP040687.1 Protein Homology CDS 1832615 1833238 . + 0 ID=cds-QIE15457.1;Parent=gene-IXO1088_008910;Dbxref=NCBI_GP:QIE15457.1;Name=QIE15457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445323.1;locus_tag=IXO1088_008910;product=GNAT family N-acetyltransferase;protein_id=QIE15457.1;transl_table=11 CP040687.1 Genbank gene 1833250 1834332 . - . ID=gene-IXO1088_008915;Name=IXO1088_008915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008915 CP040687.1 Protein Homology CDS 1833250 1834332 . - 0 ID=cds-QIE15458.1;Parent=gene-IXO1088_008915;Dbxref=NCBI_GP:QIE15458.1;Name=QIE15458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445627.1;locus_tag=IXO1088_008915;product=IS630 family transposase;protein_id=QIE15458.1;transl_table=11 CP040687.1 Genbank gene 1834465 1835784 . - . ID=gene-IXO1088_008920;Name=IXO1088_008920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008920 CP040687.1 Protein Homology CDS 1834465 1835784 . - 0 ID=cds-QIE15459.1;Parent=gene-IXO1088_008920;Dbxref=NCBI_GP:QIE15459.1;Name=QIE15459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_008920;product=IS701 family transposase;protein_id=QIE15459.1;transl_table=11 CP040687.1 Genbank pseudogene 1835855 1835989 . - . ID=gene-IXO1088_008925;Name=IXO1088_008925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008925;pseudo=true CP040687.1 Protein Homology CDS 1835855 1835989 . - 0 ID=cds-IXO1088_008925;Parent=gene-IXO1088_008925;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258514.1;locus_tag=IXO1088_008925;product=IS630 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1837038 1838641 . - . ID=gene-IXO1088_008930;Name=IXO1088_008930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008930;pseudo=true CP040687.1 Protein Homology CDS 1837038 1838641 . - 0 ID=cds-IXO1088_008930;Parent=gene-IXO1088_008930;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304437.1;locus_tag=IXO1088_008930;product=VWA domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1839052 1840015 . + . ID=gene-IXO1088_008935;Name=IXO1088_008935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008935;pseudo=true CP040687.1 Protein Homology CDS 1839052 1840015 . + 0 ID=cds-IXO1088_008935;Parent=gene-IXO1088_008935;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1088_008935;product=IS1595-like element ISXo2 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1840190 1840420 . - . ID=gene-IXO1088_008940;Name=IXO1088_008940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008940;pseudo=true CP040687.1 Protein Homology CDS 1840190 1840420 . - 0 ID=cds-IXO1088_008940;Parent=gene-IXO1088_008940;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301392.1;locus_tag=IXO1088_008940;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1840433 1841497 . + . ID=gene-IXO1088_008945;Name=IXO1088_008945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008945 CP040687.1 Protein Homology CDS 1840433 1841497 . + 0 ID=cds-QIE15460.1;Parent=gene-IXO1088_008945;Dbxref=NCBI_GP:QIE15460.1;Name=QIE15460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638262.2;locus_tag=IXO1088_008945;product=N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase;protein_id=QIE15460.1;transl_table=11 CP040687.1 Genbank gene 1841494 1842225 . + . ID=gene-IXO1088_008950;Name=IXO1088_008950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008950 CP040687.1 Protein Homology CDS 1841494 1842225 . + 0 ID=cds-QIE15461.1;Parent=gene-IXO1088_008950;Dbxref=NCBI_GP:QIE15461.1;Name=QIE15461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258519.1;locus_tag=IXO1088_008950;product=copper homeostasis protein CutC;protein_id=QIE15461.1;transl_table=11 CP040687.1 Genbank gene 1842335 1844293 . - . ID=gene-IXO1088_008955;Name=IXO1088_008955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008955 CP040687.1 Protein Homology CDS 1842335 1844293 . - 0 ID=cds-QIE15462.1;Parent=gene-IXO1088_008955;Dbxref=NCBI_GP:QIE15462.1;Name=QIE15462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408189.1;locus_tag=IXO1088_008955;product=hypothetical protein;protein_id=QIE15462.1;transl_table=11 CP040687.1 Genbank gene 1844435 1845538 . - . ID=gene-IXO1088_008960;Name=IXO1088_008960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008960 CP040687.1 Protein Homology CDS 1844435 1845538 . - 0 ID=cds-QIE15463.1;Parent=gene-IXO1088_008960;Dbxref=NCBI_GP:QIE15463.1;Name=QIE15463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301389.1;locus_tag=IXO1088_008960;product=exo-alpha-sialidase;protein_id=QIE15463.1;transl_table=11 CP040687.1 Genbank pseudogene 1845647 1845842 . + . ID=gene-IXO1088_008965;Name=IXO1088_008965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_008965;pseudo=true CP040687.1 Protein Homology CDS 1845647 1845842 . + 0 ID=cds-IXO1088_008965;Parent=gene-IXO1088_008965;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090769.1;locus_tag=IXO1088_008965;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1845918 1846238 . + . ID=gene-IXO1088_008970;Name=IXO1088_008970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008970 CP040687.1 Protein Homology CDS 1845918 1846238 . + 0 ID=cds-QIE15464.1;Parent=gene-IXO1088_008970;Dbxref=NCBI_GP:QIE15464.1;Name=QIE15464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155568.1;locus_tag=IXO1088_008970;product=R body protein RebB-like protein;protein_id=QIE15464.1;transl_table=11 CP040687.1 Genbank gene 1846296 1846496 . - . ID=gene-IXO1088_008975;Name=IXO1088_008975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008975 CP040687.1 Protein Homology CDS 1846296 1846496 . - 0 ID=cds-QIE15465.1;Parent=gene-IXO1088_008975;Dbxref=NCBI_GP:QIE15465.1;Name=QIE15465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408193.1;locus_tag=IXO1088_008975;product=hypothetical protein;protein_id=QIE15465.1;transl_table=11 CP040687.1 Genbank gene 1846697 1847032 . - . ID=gene-IXO1088_008980;Name=IXO1088_008980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008980 CP040687.1 Protein Homology CDS 1846697 1847032 . - 0 ID=cds-QIE17933.1;Parent=gene-IXO1088_008980;Dbxref=NCBI_GP:QIE17933.1;Name=QIE17933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408194.1;locus_tag=IXO1088_008980;product=hypothetical protein;protein_id=QIE17933.1;transl_table=11 CP040687.1 Genbank gene 1847114 1849645 . + . ID=gene-IXO1088_008985;Name=IXO1088_008985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008985 CP040687.1 Protein Homology CDS 1847114 1849645 . + 0 ID=cds-QIE17932.1;Parent=gene-IXO1088_008985;Dbxref=NCBI_GP:QIE17932.1;Name=QIE17932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118055.1;locus_tag=IXO1088_008985;product=type III secretion system effector protein XopK;protein_id=QIE17932.1;transl_table=11 CP040687.1 Genbank gene 1849695 1851536 . - . ID=gene-IXO1088_008990;Name=IXO1088_008990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_008990 CP040687.1 Protein Homology CDS 1849695 1851536 . - 0 ID=cds-QIE15466.1;Parent=gene-IXO1088_008990;Dbxref=NCBI_GP:QIE15466.1;Name=QIE15466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638243.1;locus_tag=IXO1088_008990;product=beta-galactosidase;protein_id=QIE15466.1;transl_table=11 CP040687.1 Genbank gene 1851713 1851789 . + . ID=gene-IXO1088_008995;Name=IXO1088_008995;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_008995 CP040687.1 cmsearch ncRNA 1851713 1851789 . + . ID=rna-IXO1088_008995;Parent=gene-IXO1088_008995;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_008995;product=sX9 sRNA CP040687.1 cmsearch exon 1851713 1851789 . + . ID=exon-IXO1088_008995-1;Parent=rna-IXO1088_008995;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_008995;product=sX9 sRNA CP040687.1 Genbank gene 1851816 1854158 . - . ID=gene-IXO1088_009000;Name=IXO1088_009000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009000 CP040687.1 Protein Homology CDS 1851816 1854158 . - 0 ID=cds-QIE15467.1;Parent=gene-IXO1088_009000;Dbxref=NCBI_GP:QIE15467.1;Name=QIE15467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638242.1;locus_tag=IXO1088_009000;product=alpha-mannosidase;protein_id=QIE15467.1;transl_table=11 CP040687.1 Genbank gene 1854294 1855757 . - . ID=gene-IXO1088_009005;Name=IXO1088_009005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009005 CP040687.1 Protein Homology CDS 1854294 1855757 . - 0 ID=cds-QIE15468.1;Parent=gene-IXO1088_009005;Dbxref=NCBI_GP:QIE15468.1;Name=QIE15468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002813906.1;locus_tag=IXO1088_009005;product=glycoside hydrolase family 125 protein;protein_id=QIE15468.1;transl_table=11 CP040687.1 Genbank gene 1856000 1856296 . + . ID=gene-IXO1088_009010;Name=IXO1088_009010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009010 CP040687.1 GeneMarkS-2+ CDS 1856000 1856296 . + 0 ID=cds-QIE15469.1;Parent=gene-IXO1088_009010;Dbxref=NCBI_GP:QIE15469.1;Name=QIE15469.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_009010;product=hypothetical protein;protein_id=QIE15469.1;transl_table=11 CP040687.1 Genbank pseudogene 1856468 1856754 . + . ID=gene-IXO1088_009015;Name=IXO1088_009015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_009015;pseudo=true CP040687.1 Protein Homology CDS 1856468 1856754 . + 0 ID=cds-IXO1088_009015;Parent=gene-IXO1088_009015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115219.1;locus_tag=IXO1088_009015;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1856751 1857122 . + . ID=gene-IXO1088_009020;Name=IXO1088_009020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009020 CP040687.1 Protein Homology CDS 1856751 1857122 . + 0 ID=cds-QIE15470.1;Parent=gene-IXO1088_009020;Dbxref=NCBI_GP:QIE15470.1;Name=QIE15470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118058.1;locus_tag=IXO1088_009020;product=biotin/lipoyl-binding protein;protein_id=QIE15470.1;transl_table=11 CP040687.1 Genbank gene 1857124 1857351 . + . ID=gene-IXO1088_009025;Name=IXO1088_009025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009025 CP040687.1 Protein Homology CDS 1857124 1857351 . + 0 ID=cds-QIE15471.1;Parent=gene-IXO1088_009025;Dbxref=NCBI_GP:QIE15471.1;Name=QIE15471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376789.1;locus_tag=IXO1088_009025;product=hypothetical protein;protein_id=QIE15471.1;transl_table=11 CP040687.1 Genbank gene 1857405 1857806 . + . ID=gene-IXO1088_009030;Name=IXO1088_009030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009030 CP040687.1 Protein Homology CDS 1857405 1857806 . + 0 ID=cds-QIE15472.1;Parent=gene-IXO1088_009030;Dbxref=NCBI_GP:QIE15472.1;Name=QIE15472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365311.1;locus_tag=IXO1088_009030;product=hypothetical protein;protein_id=QIE15472.1;transl_table=11 CP040687.1 Genbank gene 1857884 1858162 . + . ID=gene-IXO1088_009035;Name=IXO1088_009035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009035 CP040687.1 Protein Homology CDS 1857884 1858162 . + 0 ID=cds-QIE15473.1;Parent=gene-IXO1088_009035;Dbxref=NCBI_GP:QIE15473.1;Name=QIE15473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113105.1;locus_tag=IXO1088_009035;product=hypothetical protein;protein_id=QIE15473.1;transl_table=11 CP040687.1 Genbank gene 1858159 1859403 . + . ID=gene-IXO1088_009040;Name=IXO1088_009040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009040 CP040687.1 Protein Homology CDS 1858159 1859403 . + 0 ID=cds-QIE15474.1;Parent=gene-IXO1088_009040;Dbxref=NCBI_GP:QIE15474.1;Name=QIE15474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113107.1;locus_tag=IXO1088_009040;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=QIE15474.1;transl_table=11 CP040687.1 Genbank gene 1860309 1860692 . + . ID=gene-IXO1088_009045;Name=IXO1088_009045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009045 CP040687.1 Protein Homology CDS 1860309 1860692 . + 0 ID=cds-QIE17934.1;Parent=gene-IXO1088_009045;Dbxref=NCBI_GP:QIE17934.1;Name=QIE17934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304220.1;locus_tag=IXO1088_009045;product=hypothetical protein;protein_id=QIE17934.1;transl_table=11 CP040687.1 Genbank gene 1860844 1861800 . + . ID=gene-IXO1088_009050;Name=IXO1088_009050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009050 CP040687.1 Protein Homology CDS 1860844 1861800 . + 0 ID=cds-QIE15475.1;Parent=gene-IXO1088_009050;Dbxref=NCBI_GP:QIE15475.1;Name=QIE15475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=IXO1088_009050;product=IS30-like element IS1112a family transposase;protein_id=QIE15475.1;transl_table=11 CP040687.1 Genbank pseudogene 1862015 1862843 . + . ID=gene-IXO1088_009055;Name=IXO1088_009055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_009055;pseudo=true CP040687.1 Protein Homology CDS 1862015 1862843 . + 0 ID=cds-IXO1088_009055;Parent=gene-IXO1088_009055;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381222.1;locus_tag=IXO1088_009055;product=rhomboid family intramembrane serine protease;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1862847 1864961 . + . ID=gene-IXO1088_009060;Name=IXO1088_009060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009060 CP040687.1 Protein Homology CDS 1862847 1864961 . + 0 ID=cds-QIE15476.1;Parent=gene-IXO1088_009060;Dbxref=NCBI_GP:QIE15476.1;Name=QIE15476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370257.1;locus_tag=IXO1088_009060;product=peptidase domain-containing ABC transporter;protein_id=QIE15476.1;transl_table=11 CP040687.1 Genbank gene 1865107 1867776 . - . ID=gene-IXO1088_009065;Name=IXO1088_009065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009065 CP040687.1 Protein Homology CDS 1865107 1867776 . - 0 ID=cds-QIE15477.1;Parent=gene-IXO1088_009065;Dbxref=NCBI_GP:QIE15477.1;Name=QIE15477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638240.1;locus_tag=IXO1088_009065;product=glycoside hydrolase family 3 protein;protein_id=QIE15477.1;transl_table=11 CP040687.1 Genbank gene 1867981 1870236 . - . ID=gene-IXO1088_009070;Name=IXO1088_009070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009070 CP040687.1 Protein Homology CDS 1867981 1870236 . - 0 ID=cds-QIE17935.1;Parent=gene-IXO1088_009070;Dbxref=NCBI_GP:QIE17935.1;Name=QIE17935.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00703.19;locus_tag=IXO1088_009070;product=glycoside hydrolase family 2 protein;protein_id=QIE17935.1;transl_table=11 CP040687.1 Genbank pseudogene 1870187 1873218 . - . ID=gene-IXO1088_009075;Name=IXO1088_009075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_009075;pseudo=true CP040687.1 Protein Homology CDS 1870187 1873218 . - 0 ID=cds-IXO1088_009075;Parent=gene-IXO1088_009075;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472474.1;locus_tag=IXO1088_009075;product=beta-hexosaminidase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1873397 1873470 . - . ID=gene-IXO1088_009080;Name=IXO1088_009080;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_009080 CP040687.1 cmsearch ncRNA 1873397 1873470 . - . ID=rna-IXO1088_009080;Parent=gene-IXO1088_009080;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_009080;product=sX9 sRNA CP040687.1 cmsearch exon 1873397 1873470 . - . ID=exon-IXO1088_009080-1;Parent=rna-IXO1088_009080;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_009080;product=sX9 sRNA CP040687.1 Genbank gene 1873532 1874599 . - . ID=gene-IXO1088_009085;Name=IXO1088_009085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009085 CP040687.1 Protein Homology CDS 1873532 1874599 . - 0 ID=cds-QIE15478.1;Parent=gene-IXO1088_009085;Dbxref=NCBI_GP:QIE15478.1;Name=QIE15478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090759.1;locus_tag=IXO1088_009085;product=glycosyl hydrolase;protein_id=QIE15478.1;transl_table=11 CP040687.1 Genbank gene 1874603 1876288 . - . ID=gene-IXO1088_009090;Name=IXO1088_009090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009090 CP040687.1 Protein Homology CDS 1874603 1876288 . - 0 ID=cds-QIE15479.1;Parent=gene-IXO1088_009090;Dbxref=NCBI_GP:QIE15479.1;Name=QIE15479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638236.1;locus_tag=IXO1088_009090;product=alpha-L-fucosidase;protein_id=QIE15479.1;transl_table=11 CP040687.1 Genbank gene 1876496 1879189 . - . ID=gene-IXO1088_009095;Name=IXO1088_009095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009095 CP040687.1 Protein Homology CDS 1876496 1879189 . - 0 ID=cds-QIE15480.1;Parent=gene-IXO1088_009095;Dbxref=NCBI_GP:QIE15480.1;Name=QIE15480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638235.1;locus_tag=IXO1088_009095;product=TonB-dependent receptor;protein_id=QIE15480.1;transl_table=11 CP040687.1 Genbank gene 1879890 1880906 . + . ID=gene-IXO1088_009100;Name=IXO1088_009100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009100 CP040687.1 Protein Homology CDS 1879890 1880906 . + 0 ID=cds-QIE15481.1;Parent=gene-IXO1088_009100;Dbxref=NCBI_GP:QIE15481.1;Name=QIE15481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638234.1;locus_tag=IXO1088_009100;product=ROK family protein;protein_id=QIE15481.1;transl_table=11 CP040687.1 Genbank gene 1881208 1881942 . - . ID=gene-IXO1088_009105;Name=IXO1088_009105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009105 CP040687.1 Protein Homology CDS 1881208 1881942 . - 0 ID=cds-QIE15482.1;Parent=gene-IXO1088_009105;Dbxref=NCBI_GP:QIE15482.1;Name=QIE15482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638233.1;locus_tag=IXO1088_009105;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=QIE15482.1;transl_table=11 CP040687.1 Genbank gene 1881933 1883351 . - . ID=gene-IXO1088_009110;Name=IXO1088_009110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009110 CP040687.1 Protein Homology CDS 1881933 1883351 . - 0 ID=cds-QIE15483.1;Parent=gene-IXO1088_009110;Dbxref=NCBI_GP:QIE15483.1;Name=QIE15483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638232.1;locus_tag=IXO1088_009110;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=QIE15483.1;transl_table=11 CP040687.1 Genbank gene 1883384 1883941 . + . ID=gene-IXO1088_009115;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=IXO1088_009115 CP040687.1 Protein Homology CDS 1883384 1883941 . + 0 ID=cds-QIE15484.1;Parent=gene-IXO1088_009115;Dbxref=NCBI_GP:QIE15484.1;Name=QIE15484.1;gbkey=CDS;gene=nudE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638231.1;locus_tag=IXO1088_009115;product=ADP compounds hydrolase NudE;protein_id=QIE15484.1;transl_table=11 CP040687.1 Genbank gene 1883938 1884738 . + . ID=gene-IXO1088_009120;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=IXO1088_009120 CP040687.1 Protein Homology CDS 1883938 1884738 . + 0 ID=cds-QIE15485.1;Parent=gene-IXO1088_009120;Dbxref=NCBI_GP:QIE15485.1;Name=QIE15485.1;gbkey=CDS;gene=cysQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811298.1;locus_tag=IXO1088_009120;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=QIE15485.1;transl_table=11 CP040687.1 Genbank gene 1884981 1886000 . + . ID=gene-IXO1088_009125;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=IXO1088_009125 CP040687.1 Protein Homology CDS 1884981 1886000 . + 0 ID=cds-QIE15486.1;Parent=gene-IXO1088_009125;Dbxref=NCBI_GP:QIE15486.1;Name=QIE15486.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114708.1;locus_tag=IXO1088_009125;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=QIE15486.1;transl_table=11 CP040687.1 Genbank pseudogene 1885997 1886334 . + . ID=gene-IXO1088_009130;Name=IXO1088_009130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_009130;pseudo=true CP040687.1 Protein Homology CDS 1885997 1886334 . + 0 ID=cds-IXO1088_009130;Parent=gene-IXO1088_009130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482423.1;locus_tag=IXO1088_009130;product=YnfA family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1886427 1886503 . - . ID=gene-IXO1088_009135;Name=IXO1088_009135;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_009135 CP040687.1 cmsearch ncRNA 1886427 1886503 . - . ID=rna-IXO1088_009135;Parent=gene-IXO1088_009135;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_009135;product=sX9 sRNA CP040687.1 cmsearch exon 1886427 1886503 . - . ID=exon-IXO1088_009135-1;Parent=rna-IXO1088_009135;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_009135;product=sX9 sRNA CP040687.1 Genbank gene 1886632 1887597 . + . ID=gene-IXO1088_009140;Name=IXO1088_009140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009140 CP040687.1 Protein Homology CDS 1886632 1887597 . + 0 ID=cds-QIE15487.1;Parent=gene-IXO1088_009140;Dbxref=NCBI_GP:QIE15487.1;Name=QIE15487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638227.1;locus_tag=IXO1088_009140;product=SPFH/Band 7/PHB domain protein;protein_id=QIE15487.1;transl_table=11 CP040687.1 Genbank gene 1887601 1888035 . + . ID=gene-IXO1088_009145;Name=IXO1088_009145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009145 CP040687.1 Protein Homology CDS 1887601 1888035 . + 0 ID=cds-QIE15488.1;Parent=gene-IXO1088_009145;Dbxref=NCBI_GP:QIE15488.1;Name=QIE15488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638226.1;locus_tag=IXO1088_009145;product=NfeD family protein;protein_id=QIE15488.1;transl_table=11 CP040687.1 Genbank gene 1888208 1889317 . + . ID=gene-IXO1088_009150;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=IXO1088_009150 CP040687.1 Protein Homology CDS 1888208 1889317 . + 0 ID=cds-QIE15489.1;Parent=gene-IXO1088_009150;Dbxref=NCBI_GP:QIE15489.1;Name=QIE15489.1;gbkey=CDS;gene=gcvT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005931494.1;locus_tag=IXO1088_009150;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=QIE15489.1;transl_table=11 CP040687.1 Genbank gene 1889454 1889849 . + . ID=gene-IXO1088_009155;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=IXO1088_009155 CP040687.1 Protein Homology CDS 1889454 1889849 . + 0 ID=cds-QIE15490.1;Parent=gene-IXO1088_009155;Dbxref=NCBI_GP:QIE15490.1;Name=QIE15490.1;gbkey=CDS;gene=gcvH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638224.1;locus_tag=IXO1088_009155;product=glycine cleavage system protein GcvH;protein_id=QIE15490.1;transl_table=11 CP040687.1 Genbank gene 1890231 1890506 . - . ID=gene-IXO1088_009160;Name=IXO1088_009160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009160 CP040687.1 Protein Homology CDS 1890231 1890506 . - 0 ID=cds-QIE15491.1;Parent=gene-IXO1088_009160;Dbxref=NCBI_GP:QIE15491.1;Name=QIE15491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482417.1;locus_tag=IXO1088_009160;product=hypothetical protein;protein_id=QIE15491.1;transl_table=11 CP040687.1 Genbank gene 1890864 1891331 . + . ID=gene-IXO1088_009165;Name=IXO1088_009165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009165 CP040687.1 Protein Homology CDS 1890864 1891331 . + 0 ID=cds-QIE15492.1;Parent=gene-IXO1088_009165;Dbxref=NCBI_GP:QIE15492.1;Name=QIE15492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638223.1;locus_tag=IXO1088_009165;product=histidine biosynthesis protein HisIE;protein_id=QIE15492.1;transl_table=11 CP040687.1 Genbank gene 1891854 1892063 . - . ID=gene-IXO1088_009170;Name=IXO1088_009170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009170 CP040687.1 Protein Homology CDS 1891854 1892063 . - 0 ID=cds-QIE15493.1;Parent=gene-IXO1088_009170;Dbxref=NCBI_GP:QIE15493.1;Name=QIE15493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503216.1;locus_tag=IXO1088_009170;product=hypothetical protein;protein_id=QIE15493.1;transl_table=11 CP040687.1 Genbank gene 1892218 1893597 . - . ID=gene-IXO1088_009175;Name=IXO1088_009175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009175 CP040687.1 Protein Homology CDS 1892218 1893597 . - 0 ID=cds-QIE15494.1;Parent=gene-IXO1088_009175;Dbxref=NCBI_GP:QIE15494.1;Name=QIE15494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638221.1;locus_tag=IXO1088_009175;product=serine hydrolase;protein_id=QIE15494.1;transl_table=11 CP040687.1 Genbank pseudogene 1893926 1895470 . + . ID=gene-IXO1088_009180;Name=IXO1088_009180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_009180;pseudo=true CP040687.1 Protein Homology CDS 1893926 1895470 . + 0 ID=cds-IXO1088_009180;Parent=gene-IXO1088_009180;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849238.1;locus_tag=IXO1088_009180;product=MFS transporter;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1895572 1895925 . + . ID=gene-IXO1088_009185;Name=IXO1088_009185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009185 CP040687.1 Protein Homology CDS 1895572 1895925 . + 0 ID=cds-QIE15495.1;Parent=gene-IXO1088_009185;Dbxref=NCBI_GP:QIE15495.1;Name=QIE15495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302742.1;locus_tag=IXO1088_009185;product=DUF1304 domain-containing protein;protein_id=QIE15495.1;transl_table=11 CP040687.1 Genbank gene 1896320 1898794 . - . ID=gene-IXO1088_009190;Name=IXO1088_009190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009190 CP040687.1 Protein Homology CDS 1896320 1898794 . - 0 ID=cds-QIE15496.1;Parent=gene-IXO1088_009190;Dbxref=NCBI_GP:QIE15496.1;Name=QIE15496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638218.1;locus_tag=IXO1088_009190;product=acyl-CoA dehydrogenase;protein_id=QIE15496.1;transl_table=11 CP040687.1 Genbank gene 1898791 1899684 . - . ID=gene-IXO1088_009195;Name=IXO1088_009195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009195 CP040687.1 Protein Homology CDS 1898791 1899684 . - 0 ID=cds-QIE15497.1;Parent=gene-IXO1088_009195;Dbxref=NCBI_GP:QIE15497.1;Name=QIE15497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166286.1;locus_tag=IXO1088_009195;product=alpha/beta hydrolase;protein_id=QIE15497.1;transl_table=11 CP040687.1 Genbank gene 1899821 1900429 . + . ID=gene-IXO1088_009200;Name=IXO1088_009200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009200 CP040687.1 Protein Homology CDS 1899821 1900429 . + 0 ID=cds-QIE15498.1;Parent=gene-IXO1088_009200;Dbxref=NCBI_GP:QIE15498.1;Name=QIE15498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638216.1;locus_tag=IXO1088_009200;product=TetR/AcrR family transcriptional regulator;protein_id=QIE15498.1;transl_table=11 CP040687.1 Genbank gene 1900538 1903447 . - . ID=gene-IXO1088_009205;Name=IXO1088_009205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009205 CP040687.1 Protein Homology CDS 1900538 1903447 . - 0 ID=cds-QIE15499.1;Parent=gene-IXO1088_009205;Dbxref=NCBI_GP:QIE15499.1;Name=QIE15499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258556.1;locus_tag=IXO1088_009205;product=TonB-dependent receptor;protein_id=QIE15499.1;transl_table=11 CP040687.1 Genbank gene 1903695 1904564 . - . ID=gene-IXO1088_009210;Name=IXO1088_009210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009210 CP040687.1 Protein Homology CDS 1903695 1904564 . - 0 ID=cds-QIE15500.1;Parent=gene-IXO1088_009210;Dbxref=NCBI_GP:QIE15500.1;Name=QIE15500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638214.1;locus_tag=IXO1088_009210;product=hypothetical protein;protein_id=QIE15500.1;transl_table=11 CP040687.1 Genbank gene 1904685 1905575 . - . ID=gene-IXO1088_009215;Name=IXO1088_009215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009215 CP040687.1 Protein Homology CDS 1904685 1905575 . - 0 ID=cds-QIE15501.1;Parent=gene-IXO1088_009215;Dbxref=NCBI_GP:QIE15501.1;Name=QIE15501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638213.1;locus_tag=IXO1088_009215;product=Hsp33 family molecular chaperone HslO;protein_id=QIE15501.1;transl_table=11 CP040687.1 Genbank gene 1905650 1906387 . + . ID=gene-IXO1088_009220;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=IXO1088_009220 CP040687.1 Protein Homology CDS 1905650 1906387 . + 0 ID=cds-QIE15502.1;Parent=gene-IXO1088_009220;Dbxref=NCBI_GP:QIE15502.1;Name=QIE15502.1;gbkey=CDS;gene=mtgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638212.1;locus_tag=IXO1088_009220;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=QIE15502.1;transl_table=11 CP040687.1 Genbank gene 1906390 1907436 . + . ID=gene-IXO1088_009225;Name=IXO1088_009225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009225 CP040687.1 Protein Homology CDS 1906390 1907436 . + 0 ID=cds-QIE15503.1;Parent=gene-IXO1088_009225;Dbxref=NCBI_GP:QIE15503.1;Name=QIE15503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157863.1;locus_tag=IXO1088_009225;product=glycosyltransferase family 2 protein;protein_id=QIE15503.1;transl_table=11 CP040687.1 Genbank pseudogene 1907396 1907824 . + . ID=gene-IXO1088_009230;Name=IXO1088_009230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_009230;pseudo=true CP040687.1 Protein Homology CDS 1907396 1907824 . + 0 ID=cds-IXO1088_009230;Parent=gene-IXO1088_009230;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638210.1;locus_tag=IXO1088_009230;product=CBS domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1908092 1909120 . - . ID=gene-IXO1088_009235;Name=IXO1088_009235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009235 CP040687.1 Protein Homology CDS 1908092 1909120 . - 0 ID=cds-QIE15504.1;Parent=gene-IXO1088_009235;Dbxref=NCBI_GP:QIE15504.1;Name=QIE15504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445282.1;locus_tag=IXO1088_009235;product=AsmA family protein;protein_id=QIE15504.1;transl_table=11 CP040687.1 Genbank gene 1909127 1909279 . - . ID=gene-IXO1088_009240;Name=IXO1088_009240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009240 CP040687.1 Protein Homology CDS 1909127 1909279 . - 0 ID=cds-QIE15505.1;Parent=gene-IXO1088_009240;Dbxref=NCBI_GP:QIE15505.1;Name=QIE15505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504056.1;locus_tag=IXO1088_009240;product=AsmA protein;protein_id=QIE15505.1;transl_table=11 CP040687.1 Genbank gene 1909308 1909952 . - . ID=gene-IXO1088_009245;Name=IXO1088_009245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009245 CP040687.1 Protein Homology CDS 1909308 1909952 . - 0 ID=cds-QIE15506.1;Parent=gene-IXO1088_009245;Dbxref=NCBI_GP:QIE15506.1;Name=QIE15506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638208.1;locus_tag=IXO1088_009245;product=hemolysin III family protein;protein_id=QIE15506.1;transl_table=11 CP040687.1 Genbank gene 1910028 1911632 . - . ID=gene-IXO1088_009250;Name=IXO1088_009250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009250 CP040687.1 Protein Homology CDS 1910028 1911632 . - 0 ID=cds-QIE15507.1;Parent=gene-IXO1088_009250;Dbxref=NCBI_GP:QIE15507.1;Name=QIE15507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638207.1;locus_tag=IXO1088_009250;product=peptide chain release factor 3;protein_id=QIE15507.1;transl_table=11 CP040687.1 Genbank gene 1911765 1912652 . - . ID=gene-IXO1088_009255;Name=IXO1088_009255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009255 CP040687.1 Protein Homology CDS 1911765 1912652 . - 0 ID=cds-QIE17936.1;Parent=gene-IXO1088_009255;Dbxref=NCBI_GP:QIE17936.1;Name=QIE17936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368734.1;locus_tag=IXO1088_009255;product=M23 family metallopeptidase;protein_id=QIE17936.1;transl_table=11 CP040687.1 cmsearch riboswitch 1912793 1912912 . + . ID=id-CP040687.1:1912793..1912912;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP040687.1 Genbank gene 1912983 1914014 . + . ID=gene-IXO1088_009260;Name=IXO1088_009260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009260 CP040687.1 Protein Homology CDS 1912983 1914014 . + 0 ID=cds-QIE15508.1;Parent=gene-IXO1088_009260;Dbxref=NCBI_GP:QIE15508.1;Name=QIE15508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348198.1;locus_tag=IXO1088_009260;product=homoserine O-succinyltransferase;protein_id=QIE15508.1;transl_table=11 CP040687.1 Genbank gene 1914011 1915228 . + . ID=gene-IXO1088_009265;Name=IXO1088_009265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009265 CP040687.1 Protein Homology CDS 1914011 1915228 . + 0 ID=cds-QIE15509.1;Parent=gene-IXO1088_009265;Dbxref=NCBI_GP:QIE15509.1;Name=QIE15509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638204.1;locus_tag=IXO1088_009265;product=O-succinylhomoserine (thiol)-lyase;protein_id=QIE15509.1;transl_table=11 CP040687.1 Genbank pseudogene 1915270 1916320 . + . ID=gene-IXO1088_009270;Name=IXO1088_009270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_009270;pseudo=true CP040687.1 Protein Homology CDS 1915270 1916320 . + 0 ID=cds-IXO1088_009270;Parent=gene-IXO1088_009270;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638203.2;locus_tag=IXO1088_009270;product=homoserine dehydrogenase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1916994 1918376 . - . ID=gene-IXO1088_009275;Name=IXO1088_009275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009275 CP040687.1 Protein Homology CDS 1916994 1918376 . - 0 ID=cds-QIE15510.1;Parent=gene-IXO1088_009275;Dbxref=NCBI_GP:QIE15510.1;Name=QIE15510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638201.1;locus_tag=IXO1088_009275;product=L-serine ammonia-lyase;protein_id=QIE15510.1;transl_table=11 CP040687.1 Genbank gene 1918464 1918697 . + . ID=gene-IXO1088_009280;Name=IXO1088_009280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009280 CP040687.1 Protein Homology CDS 1918464 1918697 . + 0 ID=cds-QIE15511.1;Parent=gene-IXO1088_009280;Dbxref=NCBI_GP:QIE15511.1;Name=QIE15511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157852.1;locus_tag=IXO1088_009280;product=glutaredoxin family protein;protein_id=QIE15511.1;transl_table=11 CP040687.1 Genbank gene 1918783 1919172 . - . ID=gene-IXO1088_009285;Name=IXO1088_009285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009285 CP040687.1 Protein Homology CDS 1918783 1919172 . - 0 ID=cds-QIE17937.1;Parent=gene-IXO1088_009285;Dbxref=NCBI_GP:QIE17937.1;Name=QIE17937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258572.1;locus_tag=IXO1088_009285;product=excalibur calcium-binding domain-containing protein;protein_id=QIE17937.1;transl_table=11 CP040687.1 Genbank gene 1919497 1920066 . - . ID=gene-IXO1088_009290;Name=IXO1088_009290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009290 CP040687.1 Protein Homology CDS 1919497 1920066 . - 0 ID=cds-QIE15512.1;Parent=gene-IXO1088_009290;Dbxref=NCBI_GP:QIE15512.1;Name=QIE15512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638199.1;locus_tag=IXO1088_009290;product=polyisoprenoid-binding protein;protein_id=QIE15512.1;transl_table=11 CP040687.1 Genbank gene 1920076 1920639 . - . ID=gene-IXO1088_009295;Name=IXO1088_009295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009295 CP040687.1 Protein Homology CDS 1920076 1920639 . - 0 ID=cds-QIE15513.1;Parent=gene-IXO1088_009295;Dbxref=NCBI_GP:QIE15513.1;Name=QIE15513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638198.1;locus_tag=IXO1088_009295;product=cytochrome b;protein_id=QIE15513.1;transl_table=11 CP040687.1 Genbank gene 1920636 1921298 . - . ID=gene-IXO1088_009300;Name=IXO1088_009300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009300 CP040687.1 Protein Homology CDS 1920636 1921298 . - 0 ID=cds-QIE15514.1;Parent=gene-IXO1088_009300;Dbxref=NCBI_GP:QIE15514.1;Name=QIE15514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967939.1;locus_tag=IXO1088_009300;product=polyisoprenoid-binding protein;protein_id=QIE15514.1;transl_table=11 CP040687.1 Genbank gene 1921395 1924970 . + . ID=gene-IXO1088_009305;Name=IXO1088_009305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009305 CP040687.1 Protein Homology CDS 1921395 1924970 . + 0 ID=cds-QIE15515.1;Parent=gene-IXO1088_009305;Dbxref=NCBI_GP:QIE15515.1;Name=QIE15515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167533.1;locus_tag=IXO1088_009305;product=response regulator;protein_id=QIE15515.1;transl_table=11 CP040687.1 Genbank gene 1925266 1928823 . + . ID=gene-IXO1088_009310;Name=IXO1088_009310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009310 CP040687.1 Protein Homology CDS 1925266 1928823 . + 0 ID=cds-QIE17938.1;Parent=gene-IXO1088_009310;Dbxref=NCBI_GP:QIE17938.1;Name=QIE17938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445273.1;locus_tag=IXO1088_009310;product=response regulator;protein_id=QIE17938.1;transl_table=11 CP040687.1 Genbank gene 1928889 1932470 . + . ID=gene-IXO1088_009315;Name=IXO1088_009315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009315 CP040687.1 Protein Homology CDS 1928889 1932470 . + 0 ID=cds-QIE17939.1;Parent=gene-IXO1088_009315;Dbxref=NCBI_GP:QIE17939.1;Name=QIE17939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113515.1;locus_tag=IXO1088_009315;product=response regulator;protein_id=QIE17939.1;transl_table=11 CP040687.1 Genbank gene 1932495 1932668 . - . ID=gene-IXO1088_009320;Name=IXO1088_009320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009320 CP040687.1 Protein Homology CDS 1932495 1932668 . - 0 ID=cds-QIE15516.1;Parent=gene-IXO1088_009320;Dbxref=NCBI_GP:QIE15516.1;Name=QIE15516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258581.1;locus_tag=IXO1088_009320;product=MFS transporter;protein_id=QIE15516.1;transl_table=11 CP040687.1 Genbank pseudogene 1932786 1933389 . + . ID=gene-IXO1088_009325;Name=IXO1088_009325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_009325;pseudo=true CP040687.1 Protein Homology CDS 1932786 1933389 . + 0 ID=cds-IXO1088_009325;Parent=gene-IXO1088_009325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611849.1;locus_tag=IXO1088_009325;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1933437 1933846 . - . ID=gene-IXO1088_009330;Name=IXO1088_009330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_009330;pseudo=true CP040687.1 Protein Homology CDS 1933437 1933846 . - 0 ID=cds-IXO1088_009330;Parent=gene-IXO1088_009330;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=IXO1088_009330;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1934001 1935932 . + . ID=gene-IXO1088_009335;Name=IXO1088_009335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009335 CP040687.1 Protein Homology CDS 1934001 1935932 . + 0 ID=cds-QIE15517.1;Parent=gene-IXO1088_009335;Dbxref=NCBI_GP:QIE15517.1;Name=QIE15517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636625.1;locus_tag=IXO1088_009335;product=alpha-L-fucosidase;protein_id=QIE15517.1;transl_table=11 CP040687.1 Genbank gene 1936099 1936452 . + . ID=gene-IXO1088_009340;Name=IXO1088_009340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009340 CP040687.1 Protein Homology CDS 1936099 1936452 . + 0 ID=cds-QIE15518.1;Parent=gene-IXO1088_009340;Dbxref=NCBI_GP:QIE15518.1;Name=QIE15518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155583.1;locus_tag=IXO1088_009340;product=hypothetical protein;protein_id=QIE15518.1;transl_table=11 CP040687.1 Genbank pseudogene 1936691 1937407 . - . ID=gene-IXO1088_009345;Name=IXO1088_009345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_009345;pseudo=true CP040687.1 Protein Homology CDS 1936691 1937407 . - 0 ID=cds-IXO1088_009345;Parent=gene-IXO1088_009345;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050834.1;locus_tag=IXO1088_009345;product=DUF4982 domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1937493 1937882 . - . ID=gene-IXO1088_009350;Name=IXO1088_009350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_009350;pseudo=true CP040687.1 Protein Homology CDS 1937493 1937882 . - 0 ID=cds-IXO1088_009350;Parent=gene-IXO1088_009350;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636631.1;locus_tag=IXO1088_009350;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1938117 1939578 . - . ID=gene-IXO1088_009355;Name=IXO1088_009355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_009355;pseudo=true CP040687.1 Protein Homology CDS 1938117 1939578 . - 0 ID=cds-IXO1088_009355;Parent=gene-IXO1088_009355;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636632.1;locus_tag=IXO1088_009355;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1939915 1941300 . - . ID=gene-IXO1088_009360;Name=IXO1088_009360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009360 CP040687.1 Protein Homology CDS 1939915 1941300 . - 0 ID=cds-QIE15519.1;Parent=gene-IXO1088_009360;Dbxref=NCBI_GP:QIE15519.1;Name=QIE15519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005931112.1;locus_tag=IXO1088_009360;product=ImmA/IrrE family metallo-endopeptidase;protein_id=QIE15519.1;transl_table=11 CP040687.1 Genbank gene 1941439 1942944 . + . ID=gene-IXO1088_009365;Name=IXO1088_009365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009365 CP040687.1 Protein Homology CDS 1941439 1942944 . + 0 ID=cds-QIE15520.1;Parent=gene-IXO1088_009365;Dbxref=NCBI_GP:QIE15520.1;Name=QIE15520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636634.1;locus_tag=IXO1088_009365;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=QIE15520.1;transl_table=11 CP040687.1 Genbank gene 1942955 1944136 . + . ID=gene-IXO1088_009370;Name=IXO1088_009370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009370 CP040687.1 Protein Homology CDS 1942955 1944136 . + 0 ID=cds-QIE15521.1;Parent=gene-IXO1088_009370;Dbxref=NCBI_GP:QIE15521.1;Name=QIE15521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636635.1;locus_tag=IXO1088_009370;product=acyl-CoA dehydrogenase;protein_id=QIE15521.1;transl_table=11 CP040687.1 Genbank gene 1944133 1944930 . + . ID=gene-IXO1088_009375;Name=IXO1088_009375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009375 CP040687.1 Protein Homology CDS 1944133 1944930 . + 0 ID=cds-QIE15522.1;Parent=gene-IXO1088_009375;Dbxref=NCBI_GP:QIE15522.1;Name=QIE15522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636636.1;locus_tag=IXO1088_009375;product=enoyl-CoA hydratase;protein_id=QIE15522.1;transl_table=11 CP040687.1 Genbank gene 1944930 1946102 . + . ID=gene-IXO1088_009380;Name=IXO1088_009380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009380 CP040687.1 Protein Homology CDS 1944930 1946102 . + 0 ID=cds-QIE15523.1;Parent=gene-IXO1088_009380;Dbxref=NCBI_GP:QIE15523.1;Name=QIE15523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380534.1;locus_tag=IXO1088_009380;product=enoyl-CoA hydratase/isomerase family protein;protein_id=QIE15523.1;transl_table=11 CP040687.1 Genbank gene 1946262 1947164 . + . ID=gene-IXO1088_009385;Name=mmsB;gbkey=Gene;gene=mmsB;gene_biotype=protein_coding;locus_tag=IXO1088_009385 CP040687.1 Protein Homology CDS 1946262 1947164 . + 0 ID=cds-QIE17940.1;Parent=gene-IXO1088_009385;Dbxref=NCBI_GP:QIE17940.1;Name=QIE17940.1;gbkey=CDS;gene=mmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118158.1;locus_tag=IXO1088_009385;product=3-hydroxyisobutyrate dehydrogenase;protein_id=QIE17940.1;transl_table=11 CP040687.1 Genbank gene 1947403 1948368 . + . ID=gene-IXO1088_009390;Name=IXO1088_009390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009390 CP040687.1 Protein Homology CDS 1947403 1948368 . + 0 ID=cds-QIE15524.1;Parent=gene-IXO1088_009390;Dbxref=NCBI_GP:QIE15524.1;Name=QIE15524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488234.1;locus_tag=IXO1088_009390;product=cation transporter;protein_id=QIE15524.1;transl_table=11 CP040687.1 Genbank gene 1948585 1950666 . - . ID=gene-IXO1088_009395;Name=IXO1088_009395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009395 CP040687.1 Protein Homology CDS 1948585 1950666 . - 0 ID=cds-QIE15525.1;Parent=gene-IXO1088_009395;Dbxref=NCBI_GP:QIE15525.1;Name=QIE15525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810633.1;locus_tag=IXO1088_009395;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=QIE15525.1;transl_table=11 CP040687.1 Genbank gene 1950903 1951523 . + . ID=gene-IXO1088_009400;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=IXO1088_009400 CP040687.1 Protein Homology CDS 1950903 1951523 . + 0 ID=cds-QIE15526.1;Parent=gene-IXO1088_009400;Dbxref=NCBI_GP:QIE15526.1;Name=QIE15526.1;gbkey=CDS;gene=rpoE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636641.1;locus_tag=IXO1088_009400;product=RNA polymerase sigma factor RpoE;protein_id=QIE15526.1;transl_table=11 CP040687.1 Genbank gene 1951520 1952410 . + . ID=gene-IXO1088_009405;Name=IXO1088_009405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009405 CP040687.1 Protein Homology CDS 1951520 1952410 . + 0 ID=cds-QIE15527.1;Parent=gene-IXO1088_009405;Dbxref=NCBI_GP:QIE15527.1;Name=QIE15527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159519.1;locus_tag=IXO1088_009405;product=hypothetical protein;protein_id=QIE15527.1;transl_table=11 CP040687.1 Genbank gene 1952520 1954106 . + . ID=gene-IXO1088_009410;Name=IXO1088_009410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009410 CP040687.1 Protein Homology CDS 1952520 1954106 . + 0 ID=cds-QIE15528.1;Parent=gene-IXO1088_009410;Dbxref=NCBI_GP:QIE15528.1;Name=QIE15528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636643.1;locus_tag=IXO1088_009410;product=DegQ family serine endoprotease;protein_id=QIE15528.1;transl_table=11 CP040687.1 Genbank gene 1954272 1956077 . + . ID=gene-IXO1088_009415;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=IXO1088_009415 CP040687.1 Protein Homology CDS 1954272 1956077 . + 0 ID=cds-QIE15529.1;Parent=gene-IXO1088_009415;Dbxref=NCBI_GP:QIE15529.1;Name=QIE15529.1;gbkey=CDS;gene=lepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636644.1;locus_tag=IXO1088_009415;product=elongation factor 4;protein_id=QIE15529.1;transl_table=11 CP040687.1 Genbank gene 1956184 1956984 . + . ID=gene-IXO1088_009420;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=IXO1088_009420 CP040687.1 Protein Homology CDS 1956184 1956984 . + 0 ID=cds-QIE15530.1;Parent=gene-IXO1088_009420;Dbxref=NCBI_GP:QIE15530.1;Name=QIE15530.1;gbkey=CDS;gene=lepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636645.1;locus_tag=IXO1088_009420;product=signal peptidase I;protein_id=QIE15530.1;transl_table=11 CP040687.1 Genbank gene 1957015 1957392 . + . ID=gene-IXO1088_009425;Name=IXO1088_009425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009425 CP040687.1 Protein Homology CDS 1957015 1957392 . + 0 ID=cds-QIE15531.1;Parent=gene-IXO1088_009425;Dbxref=NCBI_GP:QIE15531.1;Name=QIE15531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488215.1;locus_tag=IXO1088_009425;product=DUF4845 domain-containing protein;protein_id=QIE15531.1;transl_table=11 CP040687.1 Genbank gene 1957382 1958062 . + . ID=gene-IXO1088_009430;Name=IXO1088_009430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009430 CP040687.1 Protein Homology CDS 1957382 1958062 . + 0 ID=cds-QIE15532.1;Parent=gene-IXO1088_009430;Dbxref=NCBI_GP:QIE15532.1;Name=QIE15532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445253.1;locus_tag=IXO1088_009430;product=ribonuclease III;protein_id=QIE15532.1;transl_table=11 CP040687.1 Genbank gene 1958059 1958958 . + . ID=gene-IXO1088_009435;Name=IXO1088_009435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009435 CP040687.1 Protein Homology CDS 1958059 1958958 . + 0 ID=cds-QIE15533.1;Parent=gene-IXO1088_009435;Dbxref=NCBI_GP:QIE15533.1;Name=QIE15533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921522.1;locus_tag=IXO1088_009435;product=GTPase Era;protein_id=QIE15533.1;transl_table=11 CP040687.1 Genbank gene 1959182 1959904 . + . ID=gene-IXO1088_009440;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=IXO1088_009440 CP040687.1 Protein Homology CDS 1959182 1959904 . + 0 ID=cds-QIE15534.1;Parent=gene-IXO1088_009440;Dbxref=NCBI_GP:QIE15534.1;Name=QIE15534.1;gbkey=CDS;gene=recO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300430.1;locus_tag=IXO1088_009440;product=DNA repair protein RecO;protein_id=QIE15534.1;transl_table=11 CP040687.1 Genbank gene 1960053 1960775 . - . ID=gene-IXO1088_009445;Name=IXO1088_009445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009445 CP040687.1 Protein Homology CDS 1960053 1960775 . - 0 ID=cds-QIE15535.1;Parent=gene-IXO1088_009445;Dbxref=NCBI_GP:QIE15535.1;Name=QIE15535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636650.1;locus_tag=IXO1088_009445;product=response regulator;protein_id=QIE15535.1;transl_table=11 CP040687.1 Genbank gene 1960934 1962268 . + . ID=gene-IXO1088_009450;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=IXO1088_009450 CP040687.1 Protein Homology CDS 1960934 1962268 . + 0 ID=cds-QIE15536.1;Parent=gene-IXO1088_009450;Dbxref=NCBI_GP:QIE15536.1;Name=QIE15536.1;gbkey=CDS;gene=rlmD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636651.1;locus_tag=IXO1088_009450;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=QIE15536.1;transl_table=11 CP040687.1 Genbank gene 1962443 1962940 . + . ID=gene-IXO1088_009455;Name=IXO1088_009455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009455 CP040687.1 Protein Homology CDS 1962443 1962940 . + 0 ID=cds-QIE15537.1;Parent=gene-IXO1088_009455;Dbxref=NCBI_GP:QIE15537.1;Name=QIE15537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258607.1;locus_tag=IXO1088_009455;product=CYTH domain-containing protein;protein_id=QIE15537.1;transl_table=11 CP040687.1 Genbank gene 1963036 1964271 . - . ID=gene-IXO1088_009460;Name=IXO1088_009460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009460 CP040687.1 Protein Homology CDS 1963036 1964271 . - 0 ID=cds-QIE15538.1;Parent=gene-IXO1088_009460;Dbxref=NCBI_GP:QIE15538.1;Name=QIE15538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1088_009460;product=ISL3-like element ISXoo13 family transposase;protein_id=QIE15538.1;transl_table=11 CP040687.1 Genbank gene 1964500 1965876 . + . ID=gene-IXO1088_009465;Name=IXO1088_009465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009465 CP040687.1 Protein Homology CDS 1964500 1965876 . + 0 ID=cds-QIE17941.1;Parent=gene-IXO1088_009465;Dbxref=NCBI_GP:QIE17941.1;Name=QIE17941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041183487.1;locus_tag=IXO1088_009465;product=IS5 family transposase;protein_id=QIE17941.1;transl_table=11 CP040687.1 Genbank gene 1965996 1966679 . + . ID=gene-IXO1088_009470;Name=IXO1088_009470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009470 CP040687.1 Protein Homology CDS 1965996 1966679 . + 0 ID=cds-QIE17942.1;Parent=gene-IXO1088_009470;Dbxref=NCBI_GP:QIE17942.1;Name=QIE17942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155610.1;locus_tag=IXO1088_009470;product=DsbA family oxidoreductase;protein_id=QIE17942.1;transl_table=11 CP040687.1 Genbank gene 1966696 1967730 . + . ID=gene-IXO1088_009475;Name=IXO1088_009475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009475 CP040687.1 Protein Homology CDS 1966696 1967730 . + 0 ID=cds-QIE15539.1;Parent=gene-IXO1088_009475;Dbxref=NCBI_GP:QIE15539.1;Name=QIE15539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408254.1;locus_tag=IXO1088_009475;product=FAD-dependent oxidoreductase;protein_id=QIE15539.1;transl_table=11 CP040687.1 Genbank gene 1967911 1969488 . + . ID=gene-IXO1088_009480;Name=IXO1088_009480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009480 CP040687.1 Protein Homology CDS 1967911 1969488 . + 0 ID=cds-QIE15540.1;Parent=gene-IXO1088_009480;Dbxref=NCBI_GP:QIE15540.1;Name=QIE15540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504012.1;locus_tag=IXO1088_009480;product=cryptochrome/photolyase family protein;protein_id=QIE15540.1;transl_table=11 CP040687.1 Genbank gene 1969605 1970609 . + . ID=gene-IXO1088_009485;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=IXO1088_009485 CP040687.1 Protein Homology CDS 1969605 1970609 . + 0 ID=cds-QIE15541.1;Parent=gene-IXO1088_009485;Dbxref=NCBI_GP:QIE15541.1;Name=QIE15541.1;gbkey=CDS;gene=nagZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636657.1;locus_tag=IXO1088_009485;product=beta-N-acetylhexosaminidase;protein_id=QIE15541.1;transl_table=11 CP040687.1 Genbank gene 1970609 1971163 . + . ID=gene-IXO1088_009490;Name=IXO1088_009490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009490 CP040687.1 Protein Homology CDS 1970609 1971163 . + 0 ID=cds-QIE15542.1;Parent=gene-IXO1088_009490;Dbxref=NCBI_GP:QIE15542.1;Name=QIE15542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636658.1;locus_tag=IXO1088_009490;product=hypoxanthine-guanine phosphoribosyltransferase;protein_id=QIE15542.1;transl_table=11 CP040687.1 Genbank gene 1971249 1972001 . + . ID=gene-IXO1088_009495;Name=IXO1088_009495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009495 CP040687.1 Protein Homology CDS 1971249 1972001 . + 0 ID=cds-QIE15543.1;Parent=gene-IXO1088_009495;Dbxref=NCBI_GP:QIE15543.1;Name=QIE15543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636659.1;locus_tag=IXO1088_009495;product=S-methyl-5'-thioinosine phosphorylase;protein_id=QIE15543.1;transl_table=11 CP040687.1 Genbank gene 1972088 1972294 . + . ID=gene-IXO1088_009500;Name=IXO1088_009500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009500 CP040687.1 Protein Homology CDS 1972088 1972294 . + 0 ID=cds-QIE15544.1;Parent=gene-IXO1088_009500;Dbxref=NCBI_GP:QIE15544.1;Name=QIE15544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636660.1;locus_tag=IXO1088_009500;product=cold-shock protein;protein_id=QIE15544.1;transl_table=11 CP040687.1 Genbank pseudogene 1972390 1973654 . + . ID=gene-IXO1088_009505;Name=IXO1088_009505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_009505;pseudo=true CP040687.1 Protein Homology CDS 1972390 1973654 . + 0 ID=cds-IXO1088_009505;Parent=gene-IXO1088_009505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118167.1;locus_tag=IXO1088_009505;product=FAD-dependent monooxygenase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1973714 1973787 . + . ID=gene-IXO1088_009510;Name=IXO1088_009510;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_009510 CP040687.1 cmsearch ncRNA 1973714 1973787 . + . ID=rna-IXO1088_009510;Parent=gene-IXO1088_009510;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_009510;product=sX9 sRNA CP040687.1 cmsearch exon 1973714 1973787 . + . ID=exon-IXO1088_009510-1;Parent=rna-IXO1088_009510;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_009510;product=sX9 sRNA CP040687.1 Genbank gene 1973829 1974473 . - . ID=gene-IXO1088_009515;Name=pdeM;gbkey=Gene;gene=pdeM;gene_biotype=protein_coding;locus_tag=IXO1088_009515 CP040687.1 Protein Homology CDS 1973829 1974473 . - 0 ID=cds-QIE15545.1;Parent=gene-IXO1088_009515;Dbxref=NCBI_GP:QIE15545.1;Name=QIE15545.1;gbkey=CDS;gene=pdeM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924783.1;locus_tag=IXO1088_009515;product=ligase-associated DNA damage response endonuclease PdeM;protein_id=QIE15545.1;transl_table=11 CP040687.1 Genbank gene 1974463 1976964 . - . ID=gene-IXO1088_009520;Name=IXO1088_009520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009520 CP040687.1 Protein Homology CDS 1974463 1976964 . - 0 ID=cds-QIE15546.1;Parent=gene-IXO1088_009520;Dbxref=NCBI_GP:QIE15546.1;Name=QIE15546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810357.1;locus_tag=IXO1088_009520;product=ligase-associated DNA damage response DEXH box helicase;protein_id=QIE15546.1;transl_table=11 CP040687.1 Genbank gene 1976961 1978565 . - . ID=gene-IXO1088_009525;Name=IXO1088_009525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009525 CP040687.1 Protein Homology CDS 1976961 1978565 . - 0 ID=cds-QIE15547.1;Parent=gene-IXO1088_009525;Dbxref=NCBI_GP:QIE15547.1;Name=QIE15547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636664.1;locus_tag=IXO1088_009525;product=ATP-dependent DNA ligase;protein_id=QIE15547.1;transl_table=11 CP040687.1 Genbank gene 1978562 1978795 . - . ID=gene-IXO1088_009530;Name=IXO1088_009530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009530 CP040687.1 Protein Homology CDS 1978562 1978795 . - 0 ID=cds-QIE15548.1;Parent=gene-IXO1088_009530;Dbxref=NCBI_GP:QIE15548.1;Name=QIE15548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366000.1;locus_tag=IXO1088_009530;product=hypothetical protein;protein_id=QIE15548.1;transl_table=11 CP040687.1 Genbank gene 1978792 1979814 . - . ID=gene-IXO1088_009535;Name=IXO1088_009535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009535 CP040687.1 Protein Homology CDS 1978792 1979814 . - 0 ID=cds-QIE15549.1;Parent=gene-IXO1088_009535;Dbxref=NCBI_GP:QIE15549.1;Name=QIE15549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636665.1;locus_tag=IXO1088_009535;product=ligase-associated DNA damage response exonuclease;protein_id=QIE15549.1;transl_table=11 CP040687.1 Genbank gene 1980151 1980516 . - . ID=gene-IXO1088_009540;Name=IXO1088_009540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009540 CP040687.1 Protein Homology CDS 1980151 1980516 . - 0 ID=cds-QIE15550.1;Parent=gene-IXO1088_009540;Dbxref=NCBI_GP:QIE15550.1;Name=QIE15550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302272.1;locus_tag=IXO1088_009540;product=hypothetical protein;protein_id=QIE15550.1;transl_table=11 CP040687.1 Genbank gene 1980513 1981103 . - . ID=gene-IXO1088_009545;Name=IXO1088_009545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009545 CP040687.1 Protein Homology CDS 1980513 1981103 . - 0 ID=cds-QIE15551.1;Parent=gene-IXO1088_009545;Dbxref=NCBI_GP:QIE15551.1;Name=QIE15551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504002.1;locus_tag=IXO1088_009545;product=polymer-forming cytoskeletal family protein;protein_id=QIE15551.1;transl_table=11 CP040687.1 Genbank gene 1981201 1982910 . - . ID=gene-IXO1088_009550;Name=IXO1088_009550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009550 CP040687.1 Protein Homology CDS 1981201 1982910 . - 0 ID=cds-QIE15552.1;Parent=gene-IXO1088_009550;Dbxref=NCBI_GP:QIE15552.1;Name=QIE15552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408268.1;locus_tag=IXO1088_009550;product=GGDEF domain-containing protein;protein_id=QIE15552.1;transl_table=11 CP040687.1 Genbank gene 1983019 1983345 . - . ID=gene-IXO1088_009555;Name=IXO1088_009555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009555 CP040687.1 Protein Homology CDS 1983019 1983345 . - 0 ID=cds-QIE15553.1;Parent=gene-IXO1088_009555;Dbxref=NCBI_GP:QIE15553.1;Name=QIE15553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636669.1;locus_tag=IXO1088_009555;product=hypothetical protein;protein_id=QIE15553.1;transl_table=11 CP040687.1 Genbank gene 1983575 1983919 . - . ID=gene-IXO1088_009560;Name=IXO1088_009560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009560 CP040687.1 Protein Homology CDS 1983575 1983919 . - 0 ID=cds-QIE15554.1;Parent=gene-IXO1088_009560;Dbxref=NCBI_GP:QIE15554.1;Name=QIE15554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636670.1;locus_tag=IXO1088_009560;product=hypothetical protein;protein_id=QIE15554.1;transl_table=11 CP040687.1 Genbank gene 1984042 1985217 . - . ID=gene-IXO1088_009565;Name=IXO1088_009565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009565 CP040687.1 Protein Homology CDS 1984042 1985217 . - 0 ID=cds-QIE15555.1;Parent=gene-IXO1088_009565;Dbxref=NCBI_GP:QIE15555.1;Name=QIE15555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636671.1;locus_tag=IXO1088_009565;product=thiolase family protein;protein_id=QIE15555.1;transl_table=11 CP040687.1 Genbank gene 1985373 1988201 . + . ID=gene-IXO1088_009570;Name=IXO1088_009570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009570 CP040687.1 Protein Homology CDS 1985373 1988201 . + 0 ID=cds-QIE15556.1;Parent=gene-IXO1088_009570;Dbxref=NCBI_GP:QIE15556.1;Name=QIE15556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159527.1;locus_tag=IXO1088_009570;product=autotransporter domain-containing protein;protein_id=QIE15556.1;transl_table=11 CP040687.1 Genbank gene 1988262 1989362 . - . ID=gene-IXO1088_009575;Name=IXO1088_009575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009575 CP040687.1 Protein Homology CDS 1988262 1989362 . - 0 ID=cds-QIE15557.1;Parent=gene-IXO1088_009575;Dbxref=NCBI_GP:QIE15557.1;Name=QIE15557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636673.1;locus_tag=IXO1088_009575;product=Glu/Leu/Phe/Val dehydrogenase;protein_id=QIE15557.1;transl_table=11 CP040687.1 Genbank gene 1989595 1989671 . - . ID=gene-IXO1088_009580;Name=IXO1088_009580;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_009580 CP040687.1 cmsearch ncRNA 1989595 1989671 . - . ID=rna-IXO1088_009580;Parent=gene-IXO1088_009580;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_009580;product=sX9 sRNA CP040687.1 cmsearch exon 1989595 1989671 . - . ID=exon-IXO1088_009580-1;Parent=rna-IXO1088_009580;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_009580;product=sX9 sRNA CP040687.1 Genbank gene 1989663 1989893 . + . ID=gene-IXO1088_009585;Name=IXO1088_009585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009585 CP040687.1 Protein Homology CDS 1989663 1989893 . + 0 ID=cds-QIE15558.1;Parent=gene-IXO1088_009585;Dbxref=NCBI_GP:QIE15558.1;Name=QIE15558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258260.1;locus_tag=IXO1088_009585;product=hypothetical protein;protein_id=QIE15558.1;transl_table=11 CP040687.1 Genbank gene 1989830 1990357 . - . ID=gene-IXO1088_009590;Name=IXO1088_009590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009590 CP040687.1 Protein Homology CDS 1989830 1990357 . - 0 ID=cds-QIE15559.1;Parent=gene-IXO1088_009590;Dbxref=NCBI_GP:QIE15559.1;Name=QIE15559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113015.1;locus_tag=IXO1088_009590;product=M48 family metallopeptidase;protein_id=QIE15559.1;transl_table=11 CP040687.1 Genbank gene 1990759 1990932 . + . ID=gene-IXO1088_009595;Name=IXO1088_009595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009595 CP040687.1 Protein Homology CDS 1990759 1990932 . + 0 ID=cds-QIE15560.1;Parent=gene-IXO1088_009595;Dbxref=NCBI_GP:QIE15560.1;Name=QIE15560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258629.1;locus_tag=IXO1088_009595;product=DUF1328 domain-containing protein;protein_id=QIE15560.1;transl_table=11 CP040687.1 Genbank gene 1991093 1991347 . - . ID=gene-IXO1088_009600;Name=IXO1088_009600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009600 CP040687.1 Protein Homology CDS 1991093 1991347 . - 0 ID=cds-QIE15561.1;Parent=gene-IXO1088_009600;Dbxref=NCBI_GP:QIE15561.1;Name=QIE15561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636677.1;locus_tag=IXO1088_009600;product=DUF2789 domain-containing protein;protein_id=QIE15561.1;transl_table=11 CP040687.1 Genbank gene 1991369 1992167 . - . ID=gene-IXO1088_009605;Name=IXO1088_009605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009605 CP040687.1 Protein Homology CDS 1991896 1992167 . - 0 ID=cds-QIE15562.1;Parent=gene-IXO1088_009605;Dbxref=NCBI_GP:QIE15562.1;Name=QIE15562.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_009605;product=IS5 family transposase;protein_id=QIE15562.1;transl_table=11 CP040687.1 Protein Homology CDS 1991369 1991897 . - 1 ID=cds-QIE15562.1;Parent=gene-IXO1088_009605;Dbxref=NCBI_GP:QIE15562.1;Name=QIE15562.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_009605;product=IS5 family transposase;protein_id=QIE15562.1;transl_table=11 CP040687.1 Genbank gene 1992407 1993375 . - . ID=gene-IXO1088_009610;Name=IXO1088_009610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009610 CP040687.1 Protein Homology CDS 1992407 1993375 . - 0 ID=cds-QIE15563.1;Parent=gene-IXO1088_009610;Dbxref=NCBI_GP:QIE15563.1;Name=QIE15563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_009610;product=IS5-like element ISXo1 family transposase;protein_id=QIE15563.1;transl_table=11 CP040687.1 Genbank gene 1993534 1993800 . + . ID=gene-IXO1088_009615;Name=IXO1088_009615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009615 CP040687.1 Protein Homology CDS 1993534 1993800 . + 0 ID=cds-QIE15564.1;Parent=gene-IXO1088_009615;Dbxref=NCBI_GP:QIE15564.1;Name=QIE15564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636678.1;locus_tag=IXO1088_009615;product=DksA/TraR family C4-type zinc finger protein;protein_id=QIE15564.1;transl_table=11 CP040687.1 Genbank pseudogene 1994057 1994581 . + . ID=gene-IXO1088_009620;Name=IXO1088_009620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_009620;pseudo=true CP040687.1 Protein Homology CDS 1994057 1994581 . + 0 ID=cds-IXO1088_009620;Parent=gene-IXO1088_009620;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_009620;product=IS5-like element ISXo1 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1994674 1995630 . + . ID=gene-IXO1088_009625;Name=IXO1088_009625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009625 CP040687.1 Protein Homology CDS 1994674 1995630 . + 0 ID=cds-QIE15565.1;Parent=gene-IXO1088_009625;Dbxref=NCBI_GP:QIE15565.1;Name=QIE15565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=IXO1088_009625;product=IS30-like element IS1112a family transposase;protein_id=QIE15565.1;transl_table=11 CP040687.1 Genbank pseudogene 1995784 1996359 . - . ID=gene-IXO1088_009630;Name=IXO1088_009630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_009630;pseudo=true CP040687.1 Protein Homology CDS 1995784 1996359 . - 0 ID=cds-IXO1088_009630;Parent=gene-IXO1088_009630;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_009630;product=IS701-like element ISXo15 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1996403 1997201 . + . ID=gene-IXO1088_009635;Name=IXO1088_009635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009635 CP040687.1 Protein Homology CDS 1996403 1996674 . + 0 ID=cds-QIE15566.1;Parent=gene-IXO1088_009635;Dbxref=NCBI_GP:QIE15566.1;Name=QIE15566.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_009635;product=IS5 family transposase;protein_id=QIE15566.1;transl_table=11 CP040687.1 Protein Homology CDS 1996673 1997201 . + 1 ID=cds-QIE15566.1;Parent=gene-IXO1088_009635;Dbxref=NCBI_GP:QIE15566.1;Name=QIE15566.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_009635;product=IS5 family transposase;protein_id=QIE15566.1;transl_table=11 CP040687.1 Genbank pseudogene 1997209 1997859 . - . ID=gene-IXO1088_009640;Name=IXO1088_009640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_009640;pseudo=true CP040687.1 Protein Homology CDS 1997209 1997859 . - 0 ID=cds-IXO1088_009640;Parent=gene-IXO1088_009640;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_009640;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1997906 1998704 . + . ID=gene-IXO1088_009645;Name=IXO1088_009645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009645 CP040687.1 Protein Homology CDS 1997906 1998177 . + 0 ID=cds-QIE15567.1;Parent=gene-IXO1088_009645;Dbxref=NCBI_GP:QIE15567.1;Name=QIE15567.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_009645;product=IS5 family transposase;protein_id=QIE15567.1;transl_table=11 CP040687.1 Protein Homology CDS 1998176 1998704 . + 1 ID=cds-QIE15567.1;Parent=gene-IXO1088_009645;Dbxref=NCBI_GP:QIE15567.1;Name=QIE15567.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_009645;product=IS5 family transposase;protein_id=QIE15567.1;transl_table=11 CP040687.1 Genbank pseudogene 1998714 1999289 . + . ID=gene-IXO1088_009650;Name=IXO1088_009650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_009650;pseudo=true CP040687.1 Protein Homology CDS 1998714 1999289 . + 0 ID=cds-IXO1088_009650;Parent=gene-IXO1088_009650;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_009650;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 1999372 1999434 . + . ID=gene-IXO1088_009655;Name=IXO1088_009655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_009655;pseudo=true CP040687.1 Protein Homology CDS 1999372 1999434 . + 0 ID=cds-IXO1088_009655;Parent=gene-IXO1088_009655;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304672.1;locus_tag=IXO1088_009655;product=amino acid transporter;pseudo=true;transl_table=11 CP040687.1 Genbank gene 1999429 1999505 . + . ID=gene-IXO1088_009660;Name=IXO1088_009660;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_009660 CP040687.1 cmsearch ncRNA 1999429 1999505 . + . ID=rna-IXO1088_009660;Parent=gene-IXO1088_009660;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_009660;product=sX9 sRNA CP040687.1 cmsearch exon 1999429 1999505 . + . ID=exon-IXO1088_009660-1;Parent=rna-IXO1088_009660;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_009660;product=sX9 sRNA CP040687.1 Genbank gene 1999682 1999867 . - . ID=gene-IXO1088_009665;Name=IXO1088_009665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009665 CP040687.1 Protein Homology CDS 1999682 1999867 . - 0 ID=cds-QIE15568.1;Parent=gene-IXO1088_009665;Dbxref=NCBI_GP:QIE15568.1;Name=QIE15568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814496.1;locus_tag=IXO1088_009665;product=hypothetical protein;protein_id=QIE15568.1;transl_table=11 CP040687.1 Genbank gene 2000057 2001433 . - . ID=gene-IXO1088_009670;Name=IXO1088_009670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009670 CP040687.1 Protein Homology CDS 2000057 2001433 . - 0 ID=cds-QIE15569.1;Parent=gene-IXO1088_009670;Dbxref=NCBI_GP:QIE15569.1;Name=QIE15569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503984.1;locus_tag=IXO1088_009670;product=heat-shock protein Hsp70;protein_id=QIE15569.1;transl_table=11 CP040687.1 Genbank gene 2001573 2002046 . - . ID=gene-IXO1088_009675;Name=IXO1088_009675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009675 CP040687.1 Protein Homology CDS 2001573 2002046 . - 0 ID=cds-QIE15570.1;Parent=gene-IXO1088_009675;Dbxref=NCBI_GP:QIE15570.1;Name=QIE15570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636684.1;locus_tag=IXO1088_009675;product=peptidylprolyl isomerase;protein_id=QIE15570.1;transl_table=11 CP040687.1 Genbank gene 2002222 2003457 . - . ID=gene-IXO1088_009680;Name=IXO1088_009680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009680 CP040687.1 Protein Homology CDS 2002222 2003457 . - 0 ID=cds-QIE15571.1;Parent=gene-IXO1088_009680;Dbxref=NCBI_GP:QIE15571.1;Name=QIE15571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1088_009680;product=ISL3-like element ISXoo13 family transposase;protein_id=QIE15571.1;transl_table=11 CP040687.1 Genbank gene 2003705 2004754 . - . ID=gene-IXO1088_009685;Name=IXO1088_009685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009685 CP040687.1 Protein Homology CDS 2003705 2004754 . - 0 ID=cds-QIE15572.1;Parent=gene-IXO1088_009685;Dbxref=NCBI_GP:QIE15572.1;Name=QIE15572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113013.1;locus_tag=IXO1088_009685;product=cation transporter;protein_id=QIE15572.1;transl_table=11 CP040687.1 Genbank gene 2004869 2005204 . + . ID=gene-IXO1088_009690;Name=IXO1088_009690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009690 CP040687.1 Protein Homology CDS 2004869 2005204 . + 0 ID=cds-QIE15573.1;Parent=gene-IXO1088_009690;Dbxref=NCBI_GP:QIE15573.1;Name=QIE15573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636686.1;locus_tag=IXO1088_009690;product=alkylphosphonate utilization protein;protein_id=QIE15573.1;transl_table=11 CP040687.1 Genbank gene 2005493 2005783 . - . ID=gene-IXO1088_009695;Name=IXO1088_009695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009695 CP040687.1 Protein Homology CDS 2005493 2005783 . - 0 ID=cds-QIE17943.1;Parent=gene-IXO1088_009695;Dbxref=NCBI_GP:QIE17943.1;Name=QIE17943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113012.1;locus_tag=IXO1088_009695;product=hypothetical protein;protein_id=QIE17943.1;transl_table=11 CP040687.1 Genbank gene 2006226 2006603 . - . ID=gene-IXO1088_009700;Name=IXO1088_009700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009700 CP040687.1 Protein Homology CDS 2006226 2006603 . - 0 ID=cds-QIE15574.1;Parent=gene-IXO1088_009700;Dbxref=NCBI_GP:QIE15574.1;Name=QIE15574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302608.1;locus_tag=IXO1088_009700;product=hypothetical protein;protein_id=QIE15574.1;transl_table=11 CP040687.1 Genbank gene 2006674 2007792 . - . ID=gene-IXO1088_009705;Name=IXO1088_009705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009705 CP040687.1 Protein Homology CDS 2006674 2007792 . - 0 ID=cds-QIE15575.1;Parent=gene-IXO1088_009705;Dbxref=NCBI_GP:QIE15575.1;Name=QIE15575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155638.1;locus_tag=IXO1088_009705;product=alkene reductase;protein_id=QIE15575.1;transl_table=11 CP040687.1 Genbank gene 2008013 2009224 . + . ID=gene-IXO1088_009710;Name=IXO1088_009710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009710 CP040687.1 Protein Homology CDS 2008013 2009224 . + 0 ID=cds-QIE15576.1;Parent=gene-IXO1088_009710;Dbxref=NCBI_GP:QIE15576.1;Name=QIE15576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159530.1;locus_tag=IXO1088_009710;product=MFS transporter;protein_id=QIE15576.1;transl_table=11 CP040687.1 Genbank gene 2009239 2009346 . + . ID=gene-IXO1088_009715;Name=IXO1088_009715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009715 CP040687.1 Protein Homology CDS 2009239 2009346 . + 0 ID=cds-QIE15577.1;Parent=gene-IXO1088_009715;Dbxref=NCBI_GP:QIE15577.1;Name=QIE15577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503975.1;locus_tag=IXO1088_009715;product=acyl-CoA dehydrogenase;protein_id=QIE15577.1;transl_table=11 CP040687.1 Genbank gene 2009395 2009571 . + . ID=gene-IXO1088_009720;Name=IXO1088_009720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009720 CP040687.1 Protein Homology CDS 2009395 2009571 . + 0 ID=cds-QIE15578.1;Parent=gene-IXO1088_009720;Dbxref=NCBI_GP:QIE15578.1;Name=QIE15578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155640.1;locus_tag=IXO1088_009720;product=hypothetical protein;protein_id=QIE15578.1;transl_table=11 CP040687.1 Genbank gene 2009787 2010242 . + . ID=gene-IXO1088_009725;Name=IXO1088_009725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009725 CP040687.1 Protein Homology CDS 2009787 2010242 . + 0 ID=cds-QIE15579.1;Parent=gene-IXO1088_009725;Dbxref=NCBI_GP:QIE15579.1;Name=QIE15579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636692.1;locus_tag=IXO1088_009725;product=PA2169 family four-helix-bundle protein;protein_id=QIE15579.1;transl_table=11 CP040687.1 Genbank gene 2010516 2011118 . + . ID=gene-IXO1088_009730;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=IXO1088_009730 CP040687.1 Protein Homology CDS 2010516 2011118 . + 0 ID=cds-QIE15580.1;Parent=gene-IXO1088_009730;Dbxref=NCBI_GP:QIE15580.1;Name=QIE15580.1;gbkey=CDS;gene=thpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636693.1;locus_tag=IXO1088_009730;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=QIE15580.1;transl_table=11 CP040687.1 Genbank gene 2011154 2011762 . + . ID=gene-IXO1088_009735;Name=IXO1088_009735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009735 CP040687.1 Protein Homology CDS 2011154 2011762 . + 0 ID=cds-QIE15581.1;Parent=gene-IXO1088_009735;Dbxref=NCBI_GP:QIE15581.1;Name=QIE15581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503972.1;locus_tag=IXO1088_009735;product=hypothetical protein;protein_id=QIE15581.1;transl_table=11 CP040687.1 Genbank gene 2011822 2012016 . + . ID=gene-IXO1088_009740;Name=IXO1088_009740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009740 CP040687.1 Protein Homology CDS 2011822 2012016 . + 0 ID=cds-QIE15582.1;Parent=gene-IXO1088_009740;Dbxref=NCBI_GP:QIE15582.1;Name=QIE15582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155644.1;locus_tag=IXO1088_009740;product=oxidoreductase-like protein;protein_id=QIE15582.1;transl_table=11 CP040687.1 Genbank gene 2012086 2013456 . + . ID=gene-IXO1088_009745;Name=IXO1088_009745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009745 CP040687.1 Protein Homology CDS 2012086 2013456 . + 0 ID=cds-QIE15583.1;Parent=gene-IXO1088_009745;Dbxref=NCBI_GP:QIE15583.1;Name=QIE15583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636696.1;locus_tag=IXO1088_009745;product=virulence factor family protein;protein_id=QIE15583.1;transl_table=11 CP040687.1 Genbank gene 2013650 2013726 . + . ID=gene-IXO1088_009750;Name=IXO1088_009750;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_009750 CP040687.1 cmsearch ncRNA 2013650 2013726 . + . ID=rna-IXO1088_009750;Parent=gene-IXO1088_009750;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_009750;product=sX9 sRNA CP040687.1 cmsearch exon 2013650 2013726 . + . ID=exon-IXO1088_009750-1;Parent=rna-IXO1088_009750;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_009750;product=sX9 sRNA CP040687.1 Genbank gene 2014080 2016644 . - . ID=gene-IXO1088_009755;Name=mprF;gbkey=Gene;gene=mprF;gene_biotype=protein_coding;locus_tag=IXO1088_009755 CP040687.1 Protein Homology CDS 2014080 2016644 . - 0 ID=cds-QIE15584.1;Parent=gene-IXO1088_009755;Dbxref=NCBI_GP:QIE15584.1;Name=QIE15584.1;gbkey=CDS;gene=mprF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636697.1;locus_tag=IXO1088_009755;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;protein_id=QIE15584.1;transl_table=11 CP040687.1 Genbank pseudogene 2016908 2017614 . + . ID=gene-IXO1088_009760;Name=IXO1088_009760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_009760;pseudo=true CP040687.1 Protein Homology CDS 2016908 2017614 . + 0 ID=cds-IXO1088_009760;Parent=gene-IXO1088_009760;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967322.1;locus_tag=IXO1088_009760;product=DUF998 domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2017625 2017972 . + . ID=gene-IXO1088_009765;Name=IXO1088_009765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009765 CP040687.1 Protein Homology CDS 2017625 2017972 . + 0 ID=cds-QIE15585.1;Parent=gene-IXO1088_009765;Dbxref=NCBI_GP:QIE15585.1;Name=QIE15585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366067.1;locus_tag=IXO1088_009765;product=RidA family protein;protein_id=QIE15585.1;transl_table=11 CP040687.1 Genbank gene 2018135 2019205 . - . ID=gene-IXO1088_009770;Name=IXO1088_009770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009770 CP040687.1 Protein Homology CDS 2018135 2019205 . - 0 ID=cds-QIE15586.1;Parent=gene-IXO1088_009770;Dbxref=NCBI_GP:QIE15586.1;Name=QIE15586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636700.1;locus_tag=IXO1088_009770;product=class I SAM-dependent methyltransferase;protein_id=QIE15586.1;transl_table=11 CP040687.1 Genbank gene 2019223 2020005 . - . ID=gene-IXO1088_009775;Name=IXO1088_009775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009775 CP040687.1 Protein Homology CDS 2019223 2020005 . - 0 ID=cds-QIE15587.1;Parent=gene-IXO1088_009775;Dbxref=NCBI_GP:QIE15587.1;Name=QIE15587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636701.1;locus_tag=IXO1088_009775;product=DUF1295 domain-containing protein;protein_id=QIE15587.1;transl_table=11 CP040687.1 Genbank gene 2020002 2020547 . - . ID=gene-IXO1088_009780;Name=IXO1088_009780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009780 CP040687.1 Protein Homology CDS 2020002 2020547 . - 0 ID=cds-QIE15588.1;Parent=gene-IXO1088_009780;Dbxref=NCBI_GP:QIE15588.1;Name=QIE15588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451779.1;locus_tag=IXO1088_009780;product=DUF2878 domain-containing protein;protein_id=QIE15588.1;transl_table=11 CP040687.1 Genbank gene 2020544 2021839 . - . ID=gene-IXO1088_009785;Name=IXO1088_009785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009785 CP040687.1 Protein Homology CDS 2020544 2021839 . - 0 ID=cds-QIE15589.1;Parent=gene-IXO1088_009785;Dbxref=NCBI_GP:QIE15589.1;Name=QIE15589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380444.1;locus_tag=IXO1088_009785;product=class I SAM-dependent methyltransferase;protein_id=QIE15589.1;transl_table=11 CP040687.1 Genbank gene 2021836 2022795 . - . ID=gene-IXO1088_009790;Name=IXO1088_009790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009790 CP040687.1 Protein Homology CDS 2021836 2022795 . - 0 ID=cds-QIE15590.1;Parent=gene-IXO1088_009790;Dbxref=NCBI_GP:QIE15590.1;Name=QIE15590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636704.1;locus_tag=IXO1088_009790;product=DUF1365 domain-containing protein;protein_id=QIE15590.1;transl_table=11 CP040687.1 Genbank gene 2022720 2023970 . - . ID=gene-IXO1088_009795;Name=IXO1088_009795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009795 CP040687.1 Protein Homology CDS 2022720 2023970 . - 0 ID=cds-QIE15591.1;Parent=gene-IXO1088_009795;Dbxref=NCBI_GP:QIE15591.1;Name=QIE15591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155653.1;locus_tag=IXO1088_009795;product=FAD-dependent oxidoreductase;protein_id=QIE15591.1;transl_table=11 CP040687.1 Genbank gene 2023967 2024965 . - . ID=gene-IXO1088_009800;Name=IXO1088_009800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009800 CP040687.1 Protein Homology CDS 2023967 2024965 . - 0 ID=cds-QIE15592.1;Parent=gene-IXO1088_009800;Dbxref=NCBI_GP:QIE15592.1;Name=QIE15592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166055.1;locus_tag=IXO1088_009800;product=acyl-CoA desaturase;protein_id=QIE15592.1;transl_table=11 CP040687.1 Genbank gene 2025191 2026036 . - . ID=gene-IXO1088_009805;Name=IXO1088_009805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009805 CP040687.1 Protein Homology CDS 2025191 2026036 . - 0 ID=cds-QIE15593.1;Parent=gene-IXO1088_009805;Dbxref=NCBI_GP:QIE15593.1;Name=QIE15593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636707.1;locus_tag=IXO1088_009805;product=hypothetical protein;protein_id=QIE15593.1;transl_table=11 CP040687.1 Genbank gene 2026021 2026584 . - . ID=gene-IXO1088_009810;Name=IXO1088_009810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009810 CP040687.1 Protein Homology CDS 2026021 2026584 . - 0 ID=cds-QIE15594.1;Parent=gene-IXO1088_009810;Dbxref=NCBI_GP:QIE15594.1;Name=QIE15594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636708.1;locus_tag=IXO1088_009810;product=sigma-70 family RNA polymerase sigma factor;protein_id=QIE15594.1;transl_table=11 CP040687.1 Genbank gene 2026643 2027011 . - . ID=gene-IXO1088_009815;Name=IXO1088_009815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009815 CP040687.1 Protein Homology CDS 2026643 2027011 . - 0 ID=cds-QIE15595.1;Parent=gene-IXO1088_009815;Dbxref=NCBI_GP:QIE15595.1;Name=QIE15595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366091.1;locus_tag=IXO1088_009815;product=DUF4345 domain-containing protein;protein_id=QIE15595.1;transl_table=11 CP040687.1 Genbank gene 2027097 2027879 . - . ID=gene-IXO1088_009820;Name=IXO1088_009820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009820 CP040687.1 Protein Homology CDS 2027097 2027879 . - 0 ID=cds-QIE15596.1;Parent=gene-IXO1088_009820;Dbxref=NCBI_GP:QIE15596.1;Name=QIE15596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167495.1;locus_tag=IXO1088_009820;product=hypothetical protein;protein_id=QIE15596.1;transl_table=11 CP040687.1 Genbank gene 2028103 2028285 . + . ID=gene-IXO1088_009825;Name=IXO1088_009825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009825 CP040687.1 Protein Homology CDS 2028103 2028285 . + 0 ID=cds-QIE15597.1;Parent=gene-IXO1088_009825;Dbxref=NCBI_GP:QIE15597.1;Name=QIE15597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408300.1;locus_tag=IXO1088_009825;product=hypothetical protein;protein_id=QIE15597.1;transl_table=11 CP040687.1 Genbank gene 2028498 2028926 . - . ID=gene-IXO1088_009830;Name=rnfB;gbkey=Gene;gene=rnfB;gene_biotype=protein_coding;locus_tag=IXO1088_009830 CP040687.1 Protein Homology CDS 2028498 2028926 . - 0 ID=cds-QIE15598.1;Parent=gene-IXO1088_009830;Dbxref=NCBI_GP:QIE15598.1;Name=QIE15598.1;gbkey=CDS;gene=rnfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155659.1;locus_tag=IXO1088_009830;product=Rnf electron transport complex subunit RnfB;protein_id=QIE15598.1;transl_table=11 CP040687.1 Genbank gene 2028928 2029524 . - . ID=gene-IXO1088_009835;Name=IXO1088_009835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009835 CP040687.1 Protein Homology CDS 2028928 2029524 . - 0 ID=cds-QIE15599.1;Parent=gene-IXO1088_009835;Dbxref=NCBI_GP:QIE15599.1;Name=QIE15599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015462990.1;locus_tag=IXO1088_009835;product=HAD family hydrolase;protein_id=QIE15599.1;transl_table=11 CP040687.1 Genbank gene 2029728 2031812 . - . ID=gene-IXO1088_009840;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=IXO1088_009840 CP040687.1 Protein Homology CDS 2029728 2031812 . - 0 ID=cds-QIE15600.1;Parent=gene-IXO1088_009840;Dbxref=NCBI_GP:QIE15600.1;Name=QIE15600.1;gbkey=CDS;gene=metG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636713.1;locus_tag=IXO1088_009840;product=methionine--tRNA ligase;protein_id=QIE15600.1;transl_table=11 CP040687.1 Genbank gene 2032037 2032486 . - . ID=gene-IXO1088_009845;Name=IXO1088_009845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009845 CP040687.1 Protein Homology CDS 2032037 2032486 . - 0 ID=cds-QIE15601.1;Parent=gene-IXO1088_009845;Dbxref=NCBI_GP:QIE15601.1;Name=QIE15601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237831.1;locus_tag=IXO1088_009845;product=DUF2147 domain-containing protein;protein_id=QIE15601.1;transl_table=11 CP040687.1 Genbank pseudogene 2032740 2033128 . - . ID=gene-IXO1088_009850;Name=IXO1088_009850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_009850;pseudo=true CP040687.1 Protein Homology CDS 2032740 2033128 . - 0 ID=cds-IXO1088_009850;Parent=gene-IXO1088_009850;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304415.1;locus_tag=IXO1088_009850;product=VOC family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2033250 2034303 . + . ID=gene-IXO1088_009855;Name=IXO1088_009855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009855 CP040687.1 Protein Homology CDS 2033250 2034158 . + 0 ID=cds-QIE15602.1;Parent=gene-IXO1088_009855;Dbxref=NCBI_GP:QIE15602.1;Name=QIE15602.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444376.1;locus_tag=IXO1088_009855;product=IS630 family transposase;protein_id=QIE15602.1;transl_table=11 CP040687.1 Protein Homology CDS 2034160 2034303 . + 0 ID=cds-QIE15602.1;Parent=gene-IXO1088_009855;Dbxref=NCBI_GP:QIE15602.1;Name=QIE15602.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444376.1;locus_tag=IXO1088_009855;product=IS630 family transposase;protein_id=QIE15602.1;transl_table=11 CP040687.1 Genbank gene 2034581 2035978 . + . ID=gene-IXO1088_009860;Name=mmuP;gbkey=Gene;gene=mmuP;gene_biotype=protein_coding;locus_tag=IXO1088_009860 CP040687.1 Protein Homology CDS 2034581 2035978 . + 0 ID=cds-QIE15603.1;Parent=gene-IXO1088_009860;Dbxref=NCBI_GP:QIE15603.1;Name=QIE15603.1;gbkey=CDS;gene=mmuP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965585.1;locus_tag=IXO1088_009860;product=S-methylmethionine permease;protein_id=QIE15603.1;transl_table=11 CP040687.1 Genbank gene 2035975 2036952 . + . ID=gene-IXO1088_009865;Name=mmuM;gbkey=Gene;gene=mmuM;gene_biotype=protein_coding;locus_tag=IXO1088_009865 CP040687.1 Protein Homology CDS 2035975 2036952 . + 0 ID=cds-QIE15604.1;Parent=gene-IXO1088_009865;Dbxref=NCBI_GP:QIE15604.1;Name=QIE15604.1;gbkey=CDS;gene=mmuM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258667.1;locus_tag=IXO1088_009865;product=homocysteine S-methyltransferase;protein_id=QIE15604.1;transl_table=11 CP040687.1 Genbank gene 2037134 2039071 . - . ID=gene-IXO1088_009870;Name=IXO1088_009870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009870 CP040687.1 Protein Homology CDS 2037134 2039071 . - 0 ID=cds-QIE15605.1;Parent=gene-IXO1088_009870;Dbxref=NCBI_GP:QIE15605.1;Name=QIE15605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636719.2;locus_tag=IXO1088_009870;product=DUF885 family protein;protein_id=QIE15605.1;transl_table=11 CP040687.1 Genbank gene 2039353 2039429 . - . ID=gene-IXO1088_009875;Name=IXO1088_009875;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_009875 CP040687.1 cmsearch ncRNA 2039353 2039429 . - . ID=rna-IXO1088_009875;Parent=gene-IXO1088_009875;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_009875;product=sX9 sRNA CP040687.1 cmsearch exon 2039353 2039429 . - . ID=exon-IXO1088_009875-1;Parent=rna-IXO1088_009875;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_009875;product=sX9 sRNA CP040687.1 Genbank gene 2039492 2040268 . - . ID=gene-IXO1088_009880;Name=IXO1088_009880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009880 CP040687.1 Protein Homology CDS 2039492 2040268 . - 0 ID=cds-QIE15606.1;Parent=gene-IXO1088_009880;Dbxref=NCBI_GP:QIE15606.1;Name=QIE15606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366119.1;locus_tag=IXO1088_009880;product=VUT family protein;protein_id=QIE15606.1;transl_table=11 CP040687.1 Genbank gene 2040273 2040947 . - . ID=gene-IXO1088_009885;Name=IXO1088_009885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009885 CP040687.1 Protein Homology CDS 2040273 2040947 . - 0 ID=cds-QIE15607.1;Parent=gene-IXO1088_009885;Dbxref=NCBI_GP:QIE15607.1;Name=QIE15607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636721.1;locus_tag=IXO1088_009885;product=DUF502 domain-containing protein;protein_id=QIE15607.1;transl_table=11 CP040687.1 Genbank pseudogene 2041181 2042446 . + . ID=gene-IXO1088_009890;Name=IXO1088_009890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_009890;pseudo=true CP040687.1 Protein Homology CDS 2041181 2042446 . + 0 ID=cds-IXO1088_009890;Parent=gene-IXO1088_009890;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113001.1;locus_tag=IXO1088_009890;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2042571 2043947 . + . ID=gene-IXO1088_009895;Name=IXO1088_009895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009895 CP040687.1 Protein Homology CDS 2042571 2043947 . + 0 ID=cds-QIE17944.1;Parent=gene-IXO1088_009895;Dbxref=NCBI_GP:QIE17944.1;Name=QIE17944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1088_009895;product=IS5 family transposase;protein_id=QIE17944.1;transl_table=11 CP040687.1 Genbank gene 2043987 2044382 . - . ID=gene-IXO1088_009900;Name=IXO1088_009900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009900 CP040687.1 Protein Homology CDS 2043987 2044382 . - 0 ID=cds-QIE15608.1;Parent=gene-IXO1088_009900;Dbxref=NCBI_GP:QIE15608.1;Name=QIE15608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408311.1;locus_tag=IXO1088_009900;product=type I toxin-antitoxin system SymE family toxin;protein_id=QIE15608.1;transl_table=11 CP040687.1 Genbank gene 2044425 2045900 . - . ID=gene-IXO1088_009905;Name=IXO1088_009905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009905 CP040687.1 Protein Homology CDS 2044425 2045900 . - 0 ID=cds-QIE15609.1;Parent=gene-IXO1088_009905;Dbxref=NCBI_GP:QIE15609.1;Name=QIE15609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1088_009905;product=IS5 family transposase;protein_id=QIE15609.1;transl_table=11 CP040687.1 Genbank gene 2046115 2046330 . + . ID=gene-IXO1088_009910;Name=IXO1088_009910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009910 CP040687.1 Protein Homology CDS 2046115 2046330 . + 0 ID=cds-QIE15610.1;Parent=gene-IXO1088_009910;Dbxref=NCBI_GP:QIE15610.1;Name=QIE15610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501307.1;locus_tag=IXO1088_009910;product=hypothetical protein;protein_id=QIE15610.1;transl_table=11 CP040687.1 Genbank gene 2046662 2047114 . + . ID=gene-IXO1088_009915;Name=IXO1088_009915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009915 CP040687.1 GeneMarkS-2+ CDS 2046662 2047114 . + 0 ID=cds-QIE15611.1;Parent=gene-IXO1088_009915;Dbxref=NCBI_GP:QIE15611.1;Name=QIE15611.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_009915;product=hypothetical protein;protein_id=QIE15611.1;transl_table=11 CP040687.1 Genbank gene 2047128 2047298 . - . ID=gene-IXO1088_009920;Name=IXO1088_009920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009920 CP040687.1 Protein Homology CDS 2047128 2047298 . - 0 ID=cds-QIE17945.1;Parent=gene-IXO1088_009920;Dbxref=NCBI_GP:QIE17945.1;Name=QIE17945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014414019.1;locus_tag=IXO1088_009920;product=adenylyl-sulfate kinase;protein_id=QIE17945.1;transl_table=11 CP040687.1 Genbank pseudogene 2047397 2048413 . - . ID=gene-IXO1088_009925;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=pseudogene;locus_tag=IXO1088_009925;pseudo=true CP040687.1 Protein Homology CDS 2047397 2048413 . - 0 ID=cds-IXO1088_009925;Parent=gene-IXO1088_009925;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;gene=cysC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638517.1;locus_tag=IXO1088_009925;product=adenylyl-sulfate kinase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2048426 2049467 . - . ID=gene-IXO1088_009930;Name=IXO1088_009930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_009930;pseudo=true CP040687.1 Protein Homology CDS 2048426 2049467 . - 0 ID=cds-IXO1088_009930;Parent=gene-IXO1088_009930;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1088_009930;product=IS5-like element ISXoo5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2049556 2050521 . + . ID=gene-IXO1088_009935;Name=IXO1088_009935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009935 CP040687.1 Protein Homology CDS 2049556 2050521 . + 0 ID=cds-QIE15612.1;Parent=gene-IXO1088_009935;Dbxref=NCBI_GP:QIE15612.1;Name=QIE15612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_009935;product=IS1595-like element ISXo5 family transposase;protein_id=QIE15612.1;transl_table=11 CP040687.1 Genbank pseudogene 2050528 2050976 . - . ID=gene-IXO1088_009940;Name=IXO1088_009940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_009940;pseudo=true CP040687.1 Protein Homology CDS 2050528 2050976 . - 0 ID=cds-IXO1088_009940;Parent=gene-IXO1088_009940;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1088_009940;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2050995 2051558 . - . ID=gene-IXO1088_009945;Name=IXO1088_009945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009945 CP040687.1 Protein Homology CDS 2050995 2051558 . - 0 ID=cds-QIE15613.1;Parent=gene-IXO1088_009945;Dbxref=NCBI_GP:QIE15613.1;Name=QIE15613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445198.1;locus_tag=IXO1088_009945;product=hypothetical protein;protein_id=QIE15613.1;transl_table=11 CP040687.1 Genbank gene 2051887 2051963 . - . ID=gene-IXO1088_009950;Name=IXO1088_009950;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_009950 CP040687.1 cmsearch ncRNA 2051887 2051963 . - . ID=rna-IXO1088_009950;Parent=gene-IXO1088_009950;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_009950;product=sX9 sRNA CP040687.1 cmsearch exon 2051887 2051963 . - . ID=exon-IXO1088_009950-1;Parent=rna-IXO1088_009950;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_009950;product=sX9 sRNA CP040687.1 Genbank gene 2052031 2053347 . - . ID=gene-IXO1088_009955;Name=IXO1088_009955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009955 CP040687.1 Protein Homology CDS 2052031 2053347 . - 0 ID=cds-QIE15614.1;Parent=gene-IXO1088_009955;Dbxref=NCBI_GP:QIE15614.1;Name=QIE15614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636727.2;locus_tag=IXO1088_009955;product=polyhydroxyalkanoate depolymerase;protein_id=QIE15614.1;transl_table=11 CP040687.1 Genbank gene 2053515 2054117 . - . ID=gene-IXO1088_009960;Name=IXO1088_009960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009960 CP040687.1 Protein Homology CDS 2053515 2054117 . - 0 ID=cds-QIE15615.1;Parent=gene-IXO1088_009960;Dbxref=NCBI_GP:QIE15615.1;Name=QIE15615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965597.1;locus_tag=IXO1088_009960;product=class I SAM-dependent methyltransferase;protein_id=QIE15615.1;transl_table=11 CP040687.1 Genbank gene 2054191 2054637 . + . ID=gene-IXO1088_009965;Name=IXO1088_009965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009965 CP040687.1 Protein Homology CDS 2054191 2054637 . + 0 ID=cds-QIE15616.1;Parent=gene-IXO1088_009965;Dbxref=NCBI_GP:QIE15616.1;Name=QIE15616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636729.1;locus_tag=IXO1088_009965;product=CopD family protein;protein_id=QIE15616.1;transl_table=11 CP040687.1 Genbank gene 2054715 2054981 . - . ID=gene-IXO1088_009970;Name=IXO1088_009970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009970 CP040687.1 GeneMarkS-2+ CDS 2054715 2054981 . - 0 ID=cds-QIE15617.1;Parent=gene-IXO1088_009970;Dbxref=NCBI_GP:QIE15617.1;Name=QIE15617.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_009970;product=hypothetical protein;protein_id=QIE15617.1;transl_table=11 CP040687.1 Genbank gene 2055317 2055802 . - . ID=gene-IXO1088_009975;Name=IXO1088_009975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009975 CP040687.1 GeneMarkS-2+ CDS 2055317 2055802 . - 0 ID=cds-QIE15618.1;Parent=gene-IXO1088_009975;Dbxref=NCBI_GP:QIE15618.1;Name=QIE15618.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_009975;product=IS5/IS1182 family transposase;protein_id=QIE15618.1;transl_table=11 CP040687.1 Genbank gene 2055803 2057146 . - . ID=gene-IXO1088_009980;Name=IXO1088_009980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009980 CP040687.1 Protein Homology CDS 2055803 2057146 . - 0 ID=cds-QIE15619.1;Parent=gene-IXO1088_009980;Dbxref=NCBI_GP:QIE15619.1;Name=QIE15619.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12040.6;locus_tag=IXO1088_009980;product=DUF3526 domain-containing protein;protein_id=QIE15619.1;transl_table=11 CP040687.1 Genbank gene 2057083 2058495 . - . ID=gene-IXO1088_009985;Name=IXO1088_009985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009985 CP040687.1 Protein Homology CDS 2057083 2058495 . - 0 ID=cds-QIE15620.1;Parent=gene-IXO1088_009985;Dbxref=NCBI_GP:QIE15620.1;Name=QIE15620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258681.1;locus_tag=IXO1088_009985;product=DUF3526 domain-containing protein;protein_id=QIE15620.1;transl_table=11 CP040687.1 Genbank gene 2058492 2059229 . - . ID=gene-IXO1088_009990;Name=IXO1088_009990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009990 CP040687.1 Protein Homology CDS 2058492 2059229 . - 0 ID=cds-QIE15621.1;Parent=gene-IXO1088_009990;Dbxref=NCBI_GP:QIE15621.1;Name=QIE15621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258682.1;locus_tag=IXO1088_009990;product=ABC transporter ATP-binding protein;protein_id=QIE15621.1;transl_table=11 CP040687.1 Genbank gene 2059229 2061409 . - . ID=gene-IXO1088_009995;Name=IXO1088_009995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_009995 CP040687.1 Protein Homology CDS 2059229 2061409 . - 0 ID=cds-QIE15622.1;Parent=gene-IXO1088_009995;Dbxref=NCBI_GP:QIE15622.1;Name=QIE15622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258683.1;locus_tag=IXO1088_009995;product=TonB-dependent receptor;protein_id=QIE15622.1;transl_table=11 CP040687.1 Genbank pseudogene 2061688 2062138 . + . ID=gene-IXO1088_010000;Name=IXO1088_010000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010000;pseudo=true CP040687.1 Protein Homology CDS 2061688 2062138 . + 0 ID=cds-IXO1088_010000;Parent=gene-IXO1088_010000;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1088_010000;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2062249 2063208 . - . ID=gene-IXO1088_010005;Name=IXO1088_010005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010005 CP040687.1 Protein Homology CDS 2062249 2063208 . - 0 ID=cds-QIE15623.1;Parent=gene-IXO1088_010005;Dbxref=NCBI_GP:QIE15623.1;Name=QIE15623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366140.1;locus_tag=IXO1088_010005;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=QIE15623.1;transl_table=11 CP040687.1 Genbank gene 2063384 2066974 . - . ID=gene-IXO1088_010010;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=IXO1088_010010 CP040687.1 Protein Homology CDS 2063384 2066974 . - 0 ID=cds-QIE15624.1;Parent=gene-IXO1088_010010;Dbxref=NCBI_GP:QIE15624.1;Name=QIE15624.1;gbkey=CDS;gene=dnaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636732.1;locus_tag=IXO1088_010010;product=DNA polymerase III subunit alpha;protein_id=QIE15624.1;transl_table=11 CP040687.1 Genbank gene 2067432 2068172 . - . ID=gene-IXO1088_010015;Name=IXO1088_010015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010015 CP040687.1 Protein Homology CDS 2067432 2068172 . - 0 ID=cds-QIE15625.1;Parent=gene-IXO1088_010015;Dbxref=NCBI_GP:QIE15625.1;Name=QIE15625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965609.1;locus_tag=IXO1088_010015;product=ribonuclease HII;protein_id=QIE15625.1;transl_table=11 CP040687.1 Genbank gene 2068169 2069425 . - . ID=gene-IXO1088_010020;Name=IXO1088_010020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010020 CP040687.1 Protein Homology CDS 2068169 2069425 . - 0 ID=cds-QIE15626.1;Parent=gene-IXO1088_010020;Dbxref=NCBI_GP:QIE15626.1;Name=QIE15626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503929.1;locus_tag=IXO1088_010020;product=lipid-A-disaccharide synthase;protein_id=QIE15626.1;transl_table=11 CP040687.1 Genbank gene 2069464 2070255 . - . ID=gene-IXO1088_010025;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=IXO1088_010025 CP040687.1 Protein Homology CDS 2069464 2070255 . - 0 ID=cds-QIE15627.1;Parent=gene-IXO1088_010025;Dbxref=NCBI_GP:QIE15627.1;Name=QIE15627.1;gbkey=CDS;gene=lpxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636735.1;locus_tag=IXO1088_010025;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=QIE15627.1;transl_table=11 CP040687.1 Genbank gene 2070279 2070740 . - . ID=gene-IXO1088_010030;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=IXO1088_010030 CP040687.1 Protein Homology CDS 2070279 2070740 . - 0 ID=cds-QIE15628.1;Parent=gene-IXO1088_010030;Dbxref=NCBI_GP:QIE15628.1;Name=QIE15628.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636736.1;locus_tag=IXO1088_010030;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=QIE15628.1;transl_table=11 CP040687.1 Genbank gene 2070737 2071750 . - . ID=gene-IXO1088_010035;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=IXO1088_010035 CP040687.1 Protein Homology CDS 2070737 2071750 . - 0 ID=cds-QIE15629.1;Parent=gene-IXO1088_010035;Dbxref=NCBI_GP:QIE15629.1;Name=QIE15629.1;gbkey=CDS;gene=lpxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636737.1;locus_tag=IXO1088_010035;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=QIE15629.1;transl_table=11 CP040687.1 Genbank pseudogene 2071878 2072072 . + . ID=gene-IXO1088_010040;Name=IXO1088_010040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010040;pseudo=true CP040687.1 Protein Homology CDS 2071878 2072072 . + 0 ID=cds-IXO1088_010040;Parent=gene-IXO1088_010040;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159402.1;locus_tag=IXO1088_010040;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2072081 2072879 . - . ID=gene-IXO1088_010045;Name=IXO1088_010045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010045 CP040687.1 Protein Homology CDS 2072608 2072879 . - 0 ID=cds-QIE15630.1;Parent=gene-IXO1088_010045;Dbxref=NCBI_GP:QIE15630.1;Name=QIE15630.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_010045;product=IS5 family transposase;protein_id=QIE15630.1;transl_table=11 CP040687.1 Protein Homology CDS 2072081 2072609 . - 1 ID=cds-QIE15630.1;Parent=gene-IXO1088_010045;Dbxref=NCBI_GP:QIE15630.1;Name=QIE15630.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_010045;product=IS5 family transposase;protein_id=QIE15630.1;transl_table=11 CP040687.1 Genbank gene 2073002 2075455 . - . ID=gene-IXO1088_010050;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=IXO1088_010050 CP040687.1 Protein Homology CDS 2073002 2075455 . - 0 ID=cds-QIE15631.1;Parent=gene-IXO1088_010050;Dbxref=NCBI_GP:QIE15631.1;Name=QIE15631.1;gbkey=CDS;gene=bamA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636739.1;locus_tag=IXO1088_010050;product=outer membrane protein assembly factor BamA;protein_id=QIE15631.1;transl_table=11 CP040687.1 Genbank gene 2075452 2076798 . - . ID=gene-IXO1088_010055;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=IXO1088_010055 CP040687.1 Protein Homology CDS 2075452 2076798 . - 0 ID=cds-QIE15632.1;Parent=gene-IXO1088_010055;Dbxref=NCBI_GP:QIE15632.1;Name=QIE15632.1;gbkey=CDS;gene=rseP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636740.1;locus_tag=IXO1088_010055;product=RIP metalloprotease RseP;protein_id=QIE15632.1;transl_table=11 CP040687.1 Genbank gene 2076825 2078015 . - . ID=gene-IXO1088_010060;Name=IXO1088_010060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010060 CP040687.1 Protein Homology CDS 2076825 2078015 . - 0 ID=cds-QIE15633.1;Parent=gene-IXO1088_010060;Dbxref=NCBI_GP:QIE15633.1;Name=QIE15633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636741.1;locus_tag=IXO1088_010060;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=QIE15633.1;transl_table=11 CP040687.1 Genbank gene 2078018 2078845 . - . ID=gene-IXO1088_010065;Name=IXO1088_010065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010065 CP040687.1 Protein Homology CDS 2078018 2078845 . - 0 ID=cds-QIE15634.1;Parent=gene-IXO1088_010065;Dbxref=NCBI_GP:QIE15634.1;Name=QIE15634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636742.1;locus_tag=IXO1088_010065;product=phosphatidate cytidylyltransferase;protein_id=QIE15634.1;transl_table=11 CP040687.1 Genbank gene 2078842 2079603 . - . ID=gene-IXO1088_010070;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=IXO1088_010070 CP040687.1 Protein Homology CDS 2078842 2079603 . - 0 ID=cds-QIE15635.1;Parent=gene-IXO1088_010070;Dbxref=NCBI_GP:QIE15635.1;Name=QIE15635.1;gbkey=CDS;gene=uppS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346894.1;locus_tag=IXO1088_010070;product=di-trans%2Cpoly-cis-decaprenylcistransferase;protein_id=QIE15635.1;transl_table=11 CP040687.1 Genbank gene 2079621 2080178 . - . ID=gene-IXO1088_010075;Name=IXO1088_010075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010075 CP040687.1 Protein Homology CDS 2079621 2080178 . - 0 ID=cds-QIE15636.1;Parent=gene-IXO1088_010075;Dbxref=NCBI_GP:QIE15636.1;Name=QIE15636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636744.1;locus_tag=IXO1088_010075;product=ribosome recycling factor;protein_id=QIE15636.1;transl_table=11 CP040687.1 Genbank gene 2080359 2081081 . - . ID=gene-IXO1088_010080;Name=IXO1088_010080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010080 CP040687.1 Protein Homology CDS 2080359 2081081 . - 0 ID=cds-QIE15637.1;Parent=gene-IXO1088_010080;Dbxref=NCBI_GP:QIE15637.1;Name=QIE15637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636745.1;locus_tag=IXO1088_010080;product=UMP kinase;protein_id=QIE15637.1;transl_table=11 CP040687.1 Genbank gene 2081138 2081515 . - . ID=gene-IXO1088_010085;Name=IXO1088_010085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010085 CP040687.1 Protein Homology CDS 2081138 2081515 . - 0 ID=cds-QIE15638.1;Parent=gene-IXO1088_010085;Dbxref=NCBI_GP:QIE15638.1;Name=QIE15638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408325.1;locus_tag=IXO1088_010085;product=HDOD domain-containing protein;protein_id=QIE15638.1;transl_table=11 CP040687.1 Genbank gene 2081643 2082521 . - . ID=gene-IXO1088_010090;Name=IXO1088_010090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010090 CP040687.1 Protein Homology CDS 2081643 2082521 . - 0 ID=cds-QIE15639.1;Parent=gene-IXO1088_010090;Dbxref=NCBI_GP:QIE15639.1;Name=QIE15639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636748.2;locus_tag=IXO1088_010090;product=elongation factor Ts;protein_id=QIE15639.1;transl_table=11 CP040687.1 Genbank gene 2082691 2083494 . - . ID=gene-IXO1088_010095;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=IXO1088_010095 CP040687.1 Protein Homology CDS 2082691 2083494 . - 0 ID=cds-QIE15640.1;Parent=gene-IXO1088_010095;Dbxref=NCBI_GP:QIE15640.1;Name=QIE15640.1;gbkey=CDS;gene=rpsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258701.1;locus_tag=IXO1088_010095;product=30S ribosomal protein S2;protein_id=QIE15640.1;transl_table=11 CP040687.1 Genbank gene 2083870 2084595 . - . ID=gene-IXO1088_010100;Name=IXO1088_010100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010100 CP040687.1 Protein Homology CDS 2083870 2084595 . - 0 ID=cds-QIE15641.1;Parent=gene-IXO1088_010100;Dbxref=NCBI_GP:QIE15641.1;Name=QIE15641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445181.1;locus_tag=IXO1088_010100;product=molecular chaperone;protein_id=QIE15641.1;transl_table=11 CP040687.1 Genbank gene 2084598 2084930 . - . ID=gene-IXO1088_010105;Name=IXO1088_010105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010105 CP040687.1 Protein Homology CDS 2084598 2084930 . - 0 ID=cds-QIE15642.1;Parent=gene-IXO1088_010105;Dbxref=NCBI_GP:QIE15642.1;Name=QIE15642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380368.1;locus_tag=IXO1088_010105;product=hypothetical protein;protein_id=QIE15642.1;transl_table=11 CP040687.1 Genbank gene 2084977 2086011 . - . ID=gene-IXO1088_010110;Name=IXO1088_010110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010110 CP040687.1 Protein Homology CDS 2084977 2086011 . - 0 ID=cds-QIE15643.1;Parent=gene-IXO1088_010110;Dbxref=NCBI_GP:QIE15643.1;Name=QIE15643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155696.1;locus_tag=IXO1088_010110;product=spore coat U domain-containing protein;protein_id=QIE15643.1;transl_table=11 CP040687.1 Genbank gene 2086008 2088359 . - . ID=gene-IXO1088_010115;Name=IXO1088_010115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010115 CP040687.1 Protein Homology CDS 2086008 2088359 . - 0 ID=cds-QIE15644.1;Parent=gene-IXO1088_010115;Dbxref=NCBI_GP:QIE15644.1;Name=QIE15644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169461.1;locus_tag=IXO1088_010115;product=fimbrial biogenesis outer membrane usher protein;protein_id=QIE15644.1;transl_table=11 CP040687.1 Genbank gene 2088376 2089146 . - . ID=gene-IXO1088_010120;Name=IXO1088_010120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010120 CP040687.1 Protein Homology CDS 2088376 2089146 . - 0 ID=cds-QIE15645.1;Parent=gene-IXO1088_010120;Dbxref=NCBI_GP:QIE15645.1;Name=QIE15645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089755.1;locus_tag=IXO1088_010120;product=molecular chaperone;protein_id=QIE15645.1;transl_table=11 CP040687.1 Genbank gene 2089155 2089706 . - . ID=gene-IXO1088_010125;Name=IXO1088_010125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010125 CP040687.1 Protein Homology CDS 2089155 2089706 . - 0 ID=cds-QIE15646.1;Parent=gene-IXO1088_010125;Dbxref=NCBI_GP:QIE15646.1;Name=QIE15646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576696.1;locus_tag=IXO1088_010125;product=spore coat protein U domain-containing protein;protein_id=QIE15646.1;transl_table=11 CP040687.1 Genbank gene 2089999 2090775 . + . ID=gene-IXO1088_010130;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=IXO1088_010130 CP040687.1 Protein Homology CDS 2089999 2090775 . + 0 ID=cds-QIE15647.1;Parent=gene-IXO1088_010130;Dbxref=NCBI_GP:QIE15647.1;Name=QIE15647.1;gbkey=CDS;gene=map;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366184.1;locus_tag=IXO1088_010130;product=type I methionyl aminopeptidase;protein_id=QIE15647.1;transl_table=11 CP040687.1 Genbank gene 2090772 2093381 . + . ID=gene-IXO1088_010135;Name=IXO1088_010135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010135 CP040687.1 Protein Homology CDS 2090772 2093381 . + 0 ID=cds-QIE15648.1;Parent=gene-IXO1088_010135;Dbxref=NCBI_GP:QIE15648.1;Name=QIE15648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576698.1;locus_tag=IXO1088_010135;product=[protein-PII] uridylyltransferase;protein_id=QIE15648.1;transl_table=11 CP040687.1 Genbank gene 2093398 2094594 . + . ID=gene-IXO1088_010140;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=IXO1088_010140 CP040687.1 Protein Homology CDS 2093398 2094594 . + 0 ID=cds-QIE15649.1;Parent=gene-IXO1088_010140;Dbxref=NCBI_GP:QIE15649.1;Name=QIE15649.1;gbkey=CDS;gene=dapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576699.1;locus_tag=IXO1088_010140;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=QIE15649.1;transl_table=11 CP040687.1 Genbank pseudogene 2094591 2095060 . + . ID=gene-IXO1088_010145;Name=IXO1088_010145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010145;pseudo=true CP040687.1 Protein Homology CDS 2094591 2095060 . + 0 ID=cds-IXO1088_010145;Parent=gene-IXO1088_010145;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301349.1;locus_tag=IXO1088_010145;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2095057 2095413 . + . ID=gene-IXO1088_010150;Name=IXO1088_010150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010150 CP040687.1 Protein Homology CDS 2095057 2095413 . + 0 ID=cds-QIE15650.1;Parent=gene-IXO1088_010150;Dbxref=NCBI_GP:QIE15650.1;Name=QIE15650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115327.1;locus_tag=IXO1088_010150;product=Spx/MgsR family RNA polymerase-binding regulatory protein;protein_id=QIE15650.1;transl_table=11 CP040687.1 Genbank gene 2095410 2095910 . + . ID=gene-IXO1088_010155;Name=IXO1088_010155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010155 CP040687.1 Protein Homology CDS 2095410 2095910 . + 0 ID=cds-QIE15651.1;Parent=gene-IXO1088_010155;Dbxref=NCBI_GP:QIE15651.1;Name=QIE15651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301347.1;locus_tag=IXO1088_010155;product=GNAT family N-acetyltransferase;protein_id=QIE15651.1;transl_table=11 CP040687.1 Genbank gene 2095915 2097045 . + . ID=gene-IXO1088_010160;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=IXO1088_010160 CP040687.1 Protein Homology CDS 2095915 2097045 . + 0 ID=cds-QIE15652.1;Parent=gene-IXO1088_010160;Dbxref=NCBI_GP:QIE15652.1;Name=QIE15652.1;gbkey=CDS;gene=dapE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346903.1;locus_tag=IXO1088_010160;product=succinyl-diaminopimelate desuccinylase;protein_id=QIE15652.1;transl_table=11 CP040687.1 Genbank gene 2097340 2099034 . + . ID=gene-IXO1088_010165;Name=IXO1088_010165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010165 CP040687.1 Protein Homology CDS 2097340 2099034 . + 0 ID=cds-QIE15653.1;Parent=gene-IXO1088_010165;Dbxref=NCBI_GP:QIE15653.1;Name=QIE15653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636763.1;locus_tag=IXO1088_010165;product=asparagine synthase B;protein_id=QIE15653.1;transl_table=11 CP040687.1 Genbank gene 2099103 2100209 . - . ID=gene-IXO1088_010170;Name=IXO1088_010170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010170 CP040687.1 Protein Homology CDS 2099103 2100209 . - 0 ID=cds-QIE15654.1;Parent=gene-IXO1088_010170;Dbxref=NCBI_GP:QIE15654.1;Name=QIE15654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851377.1;locus_tag=IXO1088_010170;product=right-handed parallel beta-helix repeat-containing protein;protein_id=QIE15654.1;transl_table=11 CP040687.1 Genbank gene 2100586 2102712 . - . ID=gene-IXO1088_010175;Name=IXO1088_010175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010175 CP040687.1 Protein Homology CDS 2100586 2102712 . - 0 ID=cds-QIE15655.1;Parent=gene-IXO1088_010175;Dbxref=NCBI_GP:QIE15655.1;Name=QIE15655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636765.1;locus_tag=IXO1088_010175;product=TonB-dependent siderophore receptor;protein_id=QIE15655.1;transl_table=11 CP040687.1 Genbank gene 2102805 2103266 . - . ID=gene-IXO1088_010180;Name=IXO1088_010180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010180 CP040687.1 Protein Homology CDS 2102805 2103266 . - 0 ID=cds-QIE15656.1;Parent=gene-IXO1088_010180;Dbxref=NCBI_GP:QIE15656.1;Name=QIE15656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260653.1;locus_tag=IXO1088_010180;product=hypothetical protein;protein_id=QIE15656.1;transl_table=11 CP040687.1 Genbank pseudogene 2103292 2104057 . - . ID=gene-IXO1088_010185;Name=IXO1088_010185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010185;pseudo=true CP040687.1 Protein Homology CDS 2103292 2104057 . - 0 ID=cds-IXO1088_010185;Parent=gene-IXO1088_010185;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_010185;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2104110 2106527 . - . ID=gene-IXO1088_010190;Name=IXO1088_010190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010190 CP040687.1 Protein Homology CDS 2104110 2106527 . - 0 ID=cds-QIE15657.1;Parent=gene-IXO1088_010190;Dbxref=NCBI_GP:QIE15657.1;Name=QIE15657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300242.1;locus_tag=IXO1088_010190;product=penicillin acylase family protein;protein_id=QIE15657.1;transl_table=11 CP040687.1 Genbank gene 2106623 2107159 . + . ID=gene-IXO1088_010195;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=IXO1088_010195 CP040687.1 Protein Homology CDS 2106623 2107159 . + 0 ID=cds-QIE15658.1;Parent=gene-IXO1088_010195;Dbxref=NCBI_GP:QIE15658.1;Name=QIE15658.1;gbkey=CDS;gene=bfr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155709.1;locus_tag=IXO1088_010195;product=bacterioferritin;protein_id=QIE15658.1;transl_table=11 CP040687.1 Genbank pseudogene 2107244 2107309 . - . ID=gene-IXO1088_010200;Name=IXO1088_010200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010200;pseudo=true CP040687.1 Protein Homology CDS 2107244 2107309 . - 0 ID=cds-IXO1088_010200;Parent=gene-IXO1088_010200;Note=catalyzes the S-adenosylmethionine-dependent transmethylation of thiopurine compounds%3B may be involved in selenium cycling by forming dimethylselenide and/or dimethyldiselenide%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573882.1;locus_tag=IXO1088_010200;product=thiopurine S-methyltransferase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2107615 2109858 . - . ID=gene-IXO1088_010205;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=IXO1088_010205 CP040687.1 Protein Homology CDS 2107615 2109858 . - 0 ID=cds-QIE15659.1;Parent=gene-IXO1088_010205;Dbxref=NCBI_GP:QIE15659.1;Name=QIE15659.1;gbkey=CDS;gene=parC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636769.1;locus_tag=IXO1088_010205;product=DNA topoisomerase IV subunit A;protein_id=QIE15659.1;transl_table=11 CP040687.1 Genbank gene 2109919 2110770 . - . ID=gene-IXO1088_010210;Name=IXO1088_010210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010210 CP040687.1 Protein Homology CDS 2109919 2110770 . - 0 ID=cds-QIE15660.1;Parent=gene-IXO1088_010210;Dbxref=NCBI_GP:QIE15660.1;Name=QIE15660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636770.1;locus_tag=IXO1088_010210;product=AraC family transcriptional regulator;protein_id=QIE15660.1;transl_table=11 CP040687.1 Genbank gene 2110892 2111332 . + . ID=gene-IXO1088_010215;Name=IXO1088_010215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010215 CP040687.1 Protein Homology CDS 2110892 2111332 . + 0 ID=cds-QIE15661.1;Parent=gene-IXO1088_010215;Dbxref=NCBI_GP:QIE15661.1;Name=QIE15661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089765.1;locus_tag=IXO1088_010215;product=MarR family transcriptional regulator;protein_id=QIE15661.1;transl_table=11 CP040687.1 Genbank gene 2111329 2112846 . + . ID=gene-IXO1088_010220;Name=IXO1088_010220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010220 CP040687.1 Protein Homology CDS 2111329 2112846 . + 0 ID=cds-QIE15662.1;Parent=gene-IXO1088_010220;Dbxref=NCBI_GP:QIE15662.1;Name=QIE15662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636772.1;locus_tag=IXO1088_010220;product=efflux transporter outer membrane subunit;protein_id=QIE15662.1;transl_table=11 CP040687.1 Genbank gene 2112857 2114050 . + . ID=gene-IXO1088_010225;Name=IXO1088_010225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010225 CP040687.1 Protein Homology CDS 2112857 2114050 . + 0 ID=cds-QIE15663.1;Parent=gene-IXO1088_010225;Dbxref=NCBI_GP:QIE15663.1;Name=QIE15663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636773.1;locus_tag=IXO1088_010225;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=QIE15663.1;transl_table=11 CP040687.1 Genbank gene 2114057 2115637 . + . ID=gene-IXO1088_010230;Name=IXO1088_010230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010230 CP040687.1 Protein Homology CDS 2114057 2115637 . + 0 ID=cds-QIE15664.1;Parent=gene-IXO1088_010230;Dbxref=NCBI_GP:QIE15664.1;Name=QIE15664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636774.1;locus_tag=IXO1088_010230;product=DHA2 family efflux MFS transporter permease subunit;protein_id=QIE15664.1;transl_table=11 CP040687.1 Genbank gene 2115688 2116422 . + . ID=gene-IXO1088_010235;Name=IXO1088_010235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010235 CP040687.1 Protein Homology CDS 2115688 2116422 . + 0 ID=cds-QIE15665.1;Parent=gene-IXO1088_010235;Dbxref=NCBI_GP:QIE15665.1;Name=QIE15665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258723.1;locus_tag=IXO1088_010235;product=beta-lactamase family protein;protein_id=QIE15665.1;transl_table=11 CP040687.1 Genbank gene 2116419 2117182 . - . ID=gene-IXO1088_010240;Name=IXO1088_010240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010240 CP040687.1 Protein Homology CDS 2116867 2117182 . - 0 ID=cds-QIE15666.1;Parent=gene-IXO1088_010240;Dbxref=NCBI_GP:QIE15666.1;Name=QIE15666.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_010240;product=IS5 family transposase;protein_id=QIE15666.1;transl_table=11 CP040687.1 Protein Homology CDS 2116419 2116867 . - 2 ID=cds-QIE15666.1;Parent=gene-IXO1088_010240;Dbxref=NCBI_GP:QIE15666.1;Name=QIE15666.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_010240;product=IS5 family transposase;protein_id=QIE15666.1;transl_table=11 CP040687.1 Genbank gene 2117377 2117625 . + . ID=gene-IXO1088_010245;Name=IXO1088_010245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010245 CP040687.1 Protein Homology CDS 2117377 2117625 . + 0 ID=cds-QIE15667.1;Parent=gene-IXO1088_010245;Dbxref=NCBI_GP:QIE15667.1;Name=QIE15667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155755.1;locus_tag=IXO1088_010245;product=hypothetical protein;protein_id=QIE15667.1;transl_table=11 CP040687.1 Genbank pseudogene 2117981 2118988 . - . ID=gene-IXO1088_010250;Name=IXO1088_010250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010250;pseudo=true CP040687.1 Protein Homology CDS 2117981 2118988 . - 0 ID=cds-IXO1088_010250;Parent=gene-IXO1088_010250;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612183.1;locus_tag=IXO1088_010250;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2119071 2120036 . - . ID=gene-IXO1088_010255;Name=IXO1088_010255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010255;pseudo=true CP040687.1 Protein Homology CDS 2119071 2120036 . - 0 ID=cds-IXO1088_010255;Parent=gene-IXO1088_010255;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_010255;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2120115 2121080 . - . ID=gene-IXO1088_010260;Name=IXO1088_010260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010260;pseudo=true CP040687.1 Protein Homology CDS 2120115 2121080 . - 0 ID=cds-IXO1088_010260;Parent=gene-IXO1088_010260;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229360.1;locus_tag=IXO1088_010260;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2121137 2121400 . + . ID=gene-IXO1088_010265;Name=IXO1088_010265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010265 CP040687.1 Protein Homology CDS 2121137 2121400 . + 0 ID=cds-QIE15668.1;Parent=gene-IXO1088_010265;Dbxref=NCBI_GP:QIE15668.1;Name=QIE15668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965976.1;locus_tag=IXO1088_010265;product=hypothetical protein;protein_id=QIE15668.1;transl_table=11 CP040687.1 Genbank gene 2121643 2122635 . + . ID=gene-IXO1088_010270;Name=IXO1088_010270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010270 CP040687.1 Protein Homology CDS 2121643 2122635 . + 0 ID=cds-QIE15669.1;Parent=gene-IXO1088_010270;Dbxref=NCBI_GP:QIE15669.1;Name=QIE15669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445158.1;locus_tag=IXO1088_010270;product=glycosyl transferase;protein_id=QIE15669.1;transl_table=11 CP040687.1 Genbank gene 2122672 2124588 . - . ID=gene-IXO1088_010275;Name=IXO1088_010275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010275 CP040687.1 Protein Homology CDS 2122672 2124588 . - 0 ID=cds-QIE17946.1;Parent=gene-IXO1088_010275;Dbxref=NCBI_GP:QIE17946.1;Name=QIE17946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637787.2;locus_tag=IXO1088_010275;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=QIE17946.1;transl_table=11 CP040687.1 Genbank gene 2124986 2125675 . - . ID=gene-IXO1088_010280;Name=IXO1088_010280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010280 CP040687.1 Protein Homology CDS 2124986 2125675 . - 0 ID=cds-QIE15670.1;Parent=gene-IXO1088_010280;Dbxref=NCBI_GP:QIE15670.1;Name=QIE15670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258731.1;locus_tag=IXO1088_010280;product=HNH endonuclease;protein_id=QIE15670.1;transl_table=11 CP040687.1 Genbank gene 2125948 2127741 . - . ID=gene-IXO1088_010285;Name=IXO1088_010285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010285 CP040687.1 Protein Homology CDS 2125948 2127741 . - 0 ID=cds-QIE15671.1;Parent=gene-IXO1088_010285;Dbxref=NCBI_GP:QIE15671.1;Name=QIE15671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258732.1;locus_tag=IXO1088_010285;product=acyl-CoA dehydrogenase;protein_id=QIE15671.1;transl_table=11 CP040687.1 Genbank gene 2127779 2128255 . - . ID=gene-IXO1088_010290;Name=IXO1088_010290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010290 CP040687.1 Protein Homology CDS 2127779 2128255 . - 0 ID=cds-QIE15672.1;Parent=gene-IXO1088_010290;Dbxref=NCBI_GP:QIE15672.1;Name=QIE15672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637784.1;locus_tag=IXO1088_010290;product=LEA type 2 family protein;protein_id=QIE15672.1;transl_table=11 CP040687.1 Genbank pseudogene 2128300 2128824 . + . ID=gene-IXO1088_010295;Name=IXO1088_010295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010295;pseudo=true CP040687.1 Protein Homology CDS 2128300 2128824 . + 0 ID=cds-IXO1088_010295;Parent=gene-IXO1088_010295;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636837.2;locus_tag=IXO1088_010295;product=serine peptidase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2128968 2129471 . - . ID=gene-IXO1088_010300;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=IXO1088_010300 CP040687.1 Protein Homology CDS 2128968 2129471 . - 0 ID=cds-QIE15673.1;Parent=gene-IXO1088_010300;Dbxref=NCBI_GP:QIE15673.1;Name=QIE15673.1;gbkey=CDS;gene=smpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636838.1;locus_tag=IXO1088_010300;product=SsrA-binding protein SmpB;protein_id=QIE15673.1;transl_table=11 CP040687.1 Genbank gene 2129532 2129963 . + . ID=gene-IXO1088_010305;Name=IXO1088_010305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010305 CP040687.1 Protein Homology CDS 2129532 2129963 . + 0 ID=cds-QIE15674.1;Parent=gene-IXO1088_010305;Dbxref=NCBI_GP:QIE15674.1;Name=QIE15674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636839.1;locus_tag=IXO1088_010305;product=type II toxin-antitoxin system RatA family toxin;protein_id=QIE15674.1;transl_table=11 CP040687.1 Genbank gene 2129977 2130252 . + . ID=gene-IXO1088_010310;Name=IXO1088_010310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010310 CP040687.1 Protein Homology CDS 2129977 2130252 . + 0 ID=cds-QIE15675.1;Parent=gene-IXO1088_010310;Dbxref=NCBI_GP:QIE15675.1;Name=QIE15675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258736.1;locus_tag=IXO1088_010310;product=RnfH family protein;protein_id=QIE15675.1;transl_table=11 CP040687.1 Genbank pseudogene 2130249 2130529 . - . ID=gene-IXO1088_010315;Name=IXO1088_010315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010315;pseudo=true CP040687.1 Protein Homology CDS 2130249 2130529 . - 0 ID=cds-IXO1088_010315;Parent=gene-IXO1088_010315;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304510.1;locus_tag=IXO1088_010315;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2130599 2130994 . - . ID=gene-IXO1088_010320;Name=IXO1088_010320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010320 CP040687.1 Protein Homology CDS 2130599 2130994 . - 0 ID=cds-QIE15676.1;Parent=gene-IXO1088_010320;Dbxref=NCBI_GP:QIE15676.1;Name=QIE15676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636841.1;locus_tag=IXO1088_010320;product=outer membrane protein assembly factor BamE;protein_id=QIE15676.1;transl_table=11 CP040687.1 Genbank gene 2131099 2131509 . + . ID=gene-IXO1088_010325;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=IXO1088_010325 CP040687.1 Protein Homology CDS 2131099 2131509 . + 0 ID=cds-QIE15677.1;Parent=gene-IXO1088_010325;Dbxref=NCBI_GP:QIE15677.1;Name=QIE15677.1;gbkey=CDS;gene=fur;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804358.1;locus_tag=IXO1088_010325;product=ferric iron uptake transcriptional regulator;protein_id=QIE15677.1;transl_table=11 CP040687.1 Genbank gene 2131952 2133616 . - . ID=gene-IXO1088_010330;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=IXO1088_010330 CP040687.1 Protein Homology CDS 2131952 2133616 . - 0 ID=cds-QIE15678.1;Parent=gene-IXO1088_010330;Dbxref=NCBI_GP:QIE15678.1;Name=QIE15678.1;gbkey=CDS;gene=recN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408352.1;locus_tag=IXO1088_010330;product=DNA repair protein RecN;protein_id=QIE15678.1;transl_table=11 CP040687.1 Genbank gene 2133733 2134785 . + . ID=gene-IXO1088_010335;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=IXO1088_010335 CP040687.1 Protein Homology CDS 2133733 2134785 . + 0 ID=cds-QIE15679.1;Parent=gene-IXO1088_010335;Dbxref=NCBI_GP:QIE15679.1;Name=QIE15679.1;gbkey=CDS;gene=hrcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237768.1;locus_tag=IXO1088_010335;product=heat-inducible transcriptional repressor HrcA;protein_id=QIE15679.1;transl_table=11 CP040687.1 Genbank gene 2134886 2135404 . + . ID=gene-IXO1088_010340;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=IXO1088_010340 CP040687.1 Protein Homology CDS 2134886 2135404 . + 0 ID=cds-QIE15680.1;Parent=gene-IXO1088_010340;Dbxref=NCBI_GP:QIE15680.1;Name=QIE15680.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483633.1;locus_tag=IXO1088_010340;product=nucleotide exchange factor GrpE;protein_id=QIE15680.1;transl_table=11 CP040687.1 Genbank gene 2135546 2137471 . + . ID=gene-IXO1088_010345;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=IXO1088_010345 CP040687.1 Protein Homology CDS 2135546 2137471 . + 0 ID=cds-QIE15681.1;Parent=gene-IXO1088_010345;Dbxref=NCBI_GP:QIE15681.1;Name=QIE15681.1;gbkey=CDS;gene=dnaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636846.1;locus_tag=IXO1088_010345;product=molecular chaperone DnaK;protein_id=QIE15681.1;transl_table=11 CP040687.1 Genbank gene 2137631 2138761 . + . ID=gene-IXO1088_010350;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=IXO1088_010350 CP040687.1 Protein Homology CDS 2137631 2138761 . + 0 ID=cds-QIE15682.1;Parent=gene-IXO1088_010350;Dbxref=NCBI_GP:QIE15682.1;Name=QIE15682.1;gbkey=CDS;gene=dnaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636847.1;locus_tag=IXO1088_010350;product=molecular chaperone DnaJ;protein_id=QIE15682.1;transl_table=11 CP040687.1 Genbank pseudogene 2138888 2139137 . - . ID=gene-IXO1088_010355;Name=IXO1088_010355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010355;pseudo=true CP040687.1 Protein Homology CDS 2138888 2139137 . - 0 ID=cds-IXO1088_010355;Parent=gene-IXO1088_010355;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463029.1;locus_tag=IXO1088_010355;product=TetR family transcriptional regulator;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2139292 2140200 . + . ID=gene-IXO1088_010360;Name=IXO1088_010360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010360 CP040687.1 Protein Homology CDS 2139292 2140200 . + 0 ID=cds-QIE17947.1;Parent=gene-IXO1088_010360;Dbxref=NCBI_GP:QIE17947.1;Name=QIE17947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636848.1;locus_tag=IXO1088_010360;product=pyridoxal kinase;protein_id=QIE17947.1;transl_table=11 CP040687.1 Genbank gene 2140197 2141318 . + . ID=gene-IXO1088_010365;Name=IXO1088_010365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010365 CP040687.1 Protein Homology CDS 2140197 2141318 . + 0 ID=cds-QIE15683.1;Parent=gene-IXO1088_010365;Dbxref=NCBI_GP:QIE15683.1;Name=QIE15683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502753.1;locus_tag=IXO1088_010365;product=prephenate dehydrogenase;protein_id=QIE15683.1;transl_table=11 CP040687.1 Genbank gene 2141688 2143007 . - . ID=gene-IXO1088_010370;Name=IXO1088_010370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010370 CP040687.1 Protein Homology CDS 2141688 2143007 . - 0 ID=cds-QIE15684.1;Parent=gene-IXO1088_010370;Dbxref=NCBI_GP:QIE15684.1;Name=QIE15684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_010370;product=IS701 family transposase;protein_id=QIE15684.1;transl_table=11 CP040687.1 Genbank gene 2143342 2144268 . - . ID=gene-IXO1088_010375;Name=IXO1088_010375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010375 CP040687.1 Protein Homology CDS 2143342 2144268 . - 0 ID=cds-QIE15685.1;Parent=gene-IXO1088_010375;Dbxref=NCBI_GP:QIE15685.1;Name=QIE15685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964687.1;locus_tag=IXO1088_010375;product=TolC family protein;protein_id=QIE15685.1;transl_table=11 CP040687.1 Genbank gene 2144398 2145003 . - . ID=gene-IXO1088_010380;Name=IXO1088_010380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010380 CP040687.1 Protein Homology CDS 2144398 2145003 . - 0 ID=cds-QIE15686.1;Parent=gene-IXO1088_010380;Dbxref=NCBI_GP:QIE15686.1;Name=QIE15686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258748.1;locus_tag=IXO1088_010380;product=LysR family transcriptional regulator;protein_id=QIE15686.1;transl_table=11 CP040687.1 Genbank pseudogene 2145005 2145100 . - . ID=gene-IXO1088_010385;Name=IXO1088_010385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010385;pseudo=true CP040687.1 Protein Homology CDS 2145005 2145100 . - 0 ID=cds-IXO1088_010385;Parent=gene-IXO1088_010385;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00126.25;locus_tag=IXO1088_010385;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2145167 2145241 . - . ID=gene-IXO1088_010390;Name=IXO1088_010390;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_010390 CP040687.1 cmsearch ncRNA 2145167 2145241 . - . ID=rna-IXO1088_010390;Parent=gene-IXO1088_010390;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_010390;product=sX9 sRNA CP040687.1 cmsearch exon 2145167 2145241 . - . ID=exon-IXO1088_010390-1;Parent=rna-IXO1088_010390;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_010390;product=sX9 sRNA CP040687.1 Genbank gene 2145342 2147111 . - . ID=gene-IXO1088_010395;Name=IXO1088_010395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010395 CP040687.1 Protein Homology CDS 2145342 2147111 . - 0 ID=cds-QIE15687.1;Parent=gene-IXO1088_010395;Dbxref=NCBI_GP:QIE15687.1;Name=QIE15687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636854.1;locus_tag=IXO1088_010395;product=ATP-binding cassette domain-containing protein;protein_id=QIE15687.1;transl_table=11 CP040687.1 Genbank gene 2147108 2147701 . - . ID=gene-IXO1088_010400;Name=IXO1088_010400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010400 CP040687.1 Protein Homology CDS 2147108 2147701 . - 0 ID=cds-QIE15688.1;Parent=gene-IXO1088_010400;Dbxref=NCBI_GP:QIE15688.1;Name=QIE15688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636855.2;locus_tag=IXO1088_010400;product=YigZ family protein;protein_id=QIE15688.1;transl_table=11 CP040687.1 Genbank gene 2147969 2148562 . - . ID=gene-IXO1088_010405;Name=IXO1088_010405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010405 CP040687.1 Protein Homology CDS 2147969 2148562 . - 0 ID=cds-QIE15689.1;Parent=gene-IXO1088_010405;Dbxref=NCBI_GP:QIE15689.1;Name=QIE15689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366391.1;locus_tag=IXO1088_010405;product=TIGR00730 family Rossman fold protein;protein_id=QIE15689.1;transl_table=11 CP040687.1 Genbank gene 2148761 2150197 . - . ID=gene-IXO1088_010410;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=IXO1088_010410 CP040687.1 Protein Homology CDS 2148761 2150197 . - 0 ID=cds-QIE15690.1;Parent=gene-IXO1088_010410;Dbxref=NCBI_GP:QIE15690.1;Name=QIE15690.1;gbkey=CDS;gene=lpdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636857.1;locus_tag=IXO1088_010410;product=dihydrolipoyl dehydrogenase;protein_id=QIE15690.1;transl_table=11 CP040687.1 Genbank gene 2150439 2151641 . - . ID=gene-IXO1088_010415;Name=sucB;gbkey=Gene;gene=sucB;gene_biotype=protein_coding;locus_tag=IXO1088_010415 CP040687.1 Protein Homology CDS 2150439 2151641 . - 0 ID=cds-QIE15691.1;Parent=gene-IXO1088_010415;Dbxref=NCBI_GP:QIE15691.1;Name=QIE15691.1;gbkey=CDS;gene=sucB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636858.1;locus_tag=IXO1088_010415;product=dihydrolipoyllysine-residue succinyltransferase;protein_id=QIE15691.1;transl_table=11 CP040687.1 Genbank gene 2151684 2154512 . - . ID=gene-IXO1088_010420;Name=IXO1088_010420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010420 CP040687.1 Protein Homology CDS 2151684 2154512 . - 0 ID=cds-QIE15692.1;Parent=gene-IXO1088_010420;Dbxref=NCBI_GP:QIE15692.1;Name=QIE15692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636859.2;locus_tag=IXO1088_010420;product=2-oxoglutarate dehydrogenase E1 component;protein_id=QIE15692.1;transl_table=11 CP040687.1 Genbank gene 2154693 2155625 . - . ID=gene-IXO1088_010425;Name=IXO1088_010425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010425 CP040687.1 Protein Homology CDS 2154693 2155625 . - 0 ID=cds-QIE15693.1;Parent=gene-IXO1088_010425;Dbxref=NCBI_GP:QIE15693.1;Name=QIE15693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408361.1;locus_tag=IXO1088_010425;product=GNAT family N-acetyltransferase;protein_id=QIE15693.1;transl_table=11 CP040687.1 Genbank gene 2155622 2157118 . - . ID=gene-IXO1088_010430;Name=IXO1088_010430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010430 CP040687.1 Protein Homology CDS 2155622 2157118 . - 0 ID=cds-QIE15694.1;Parent=gene-IXO1088_010430;Dbxref=NCBI_GP:QIE15694.1;Name=QIE15694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118789.1;locus_tag=IXO1088_010430;product=cupin domain-containing protein;protein_id=QIE15694.1;transl_table=11 CP040687.1 Genbank gene 2157456 2157719 . + . ID=gene-IXO1088_010435;Name=IXO1088_010435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010435 CP040687.1 Protein Homology CDS 2157456 2157719 . + 0 ID=cds-QIE17948.1;Parent=gene-IXO1088_010435;Dbxref=NCBI_GP:QIE17948.1;Name=QIE17948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156794.1;locus_tag=IXO1088_010435;product=PDZ domain-containing protein;protein_id=QIE17948.1;transl_table=11 CP040687.1 Genbank gene 2157736 2157811 . - . ID=gene-IXO1088_010440;Name=IXO1088_010440;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_010440 CP040687.1 cmsearch ncRNA 2157736 2157811 . - . ID=rna-IXO1088_010440;Parent=gene-IXO1088_010440;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_010440;product=sX9 sRNA CP040687.1 cmsearch exon 2157736 2157811 . - . ID=exon-IXO1088_010440-1;Parent=rna-IXO1088_010440;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_010440;product=sX9 sRNA CP040687.1 Genbank gene 2157999 2158499 . - . ID=gene-IXO1088_010445;Name=IXO1088_010445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010445 CP040687.1 Protein Homology CDS 2157999 2158499 . - 0 ID=cds-QIE15695.1;Parent=gene-IXO1088_010445;Dbxref=NCBI_GP:QIE15695.1;Name=QIE15695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346970.1;locus_tag=IXO1088_010445;product=DUF3060 domain-containing protein;protein_id=QIE15695.1;transl_table=11 CP040687.1 Genbank gene 2158751 2160118 . - . ID=gene-IXO1088_010450;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=IXO1088_010450 CP040687.1 Protein Homology CDS 2158751 2160118 . - 0 ID=cds-QIE15696.1;Parent=gene-IXO1088_010450;Dbxref=NCBI_GP:QIE15696.1;Name=QIE15696.1;gbkey=CDS;gene=purB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636864.1;locus_tag=IXO1088_010450;product=adenylosuccinate lyase;protein_id=QIE15696.1;transl_table=11 CP040687.1 Genbank pseudogene 2160316 2161169 . + . ID=gene-IXO1088_010455;Name=IXO1088_010455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010455;pseudo=true CP040687.1 Protein Homology CDS 2160316 2161169 . + 0 ID=cds-IXO1088_010455;Parent=gene-IXO1088_010455;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118792.1;locus_tag=IXO1088_010455;product=CAP domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2161171 2162091 . - . ID=gene-IXO1088_010460;Name=IXO1088_010460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010460;pseudo=true CP040687.1 Protein Homology CDS 2161171 2162091 . - 0 ID=cds-IXO1088_010460;Parent=gene-IXO1088_010460;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115089.1;locus_tag=IXO1088_010460;product=HlyC/CorC family transporter;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2162094 2163126 . + . ID=gene-IXO1088_010465;Name=IXO1088_010465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010465;pseudo=true CP040687.1 Protein Homology CDS 2162094 2163126 . + 0 ID=cds-IXO1088_010465;Parent=gene-IXO1088_010465;Note=programmed frameshift%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260659.1;locus_tag=IXO1088_010465;product=IS630 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2163141 2163904 . + . ID=gene-IXO1088_010470;Name=IXO1088_010470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010470 CP040687.1 Protein Homology CDS 2163141 2163456 . + 0 ID=cds-QIE15697.1;Parent=gene-IXO1088_010470;Dbxref=NCBI_GP:QIE15697.1;Name=QIE15697.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_010470;product=IS5 family transposase;protein_id=QIE15697.1;transl_table=11 CP040687.1 Protein Homology CDS 2163456 2163904 . + 2 ID=cds-QIE15697.1;Parent=gene-IXO1088_010470;Dbxref=NCBI_GP:QIE15697.1;Name=QIE15697.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_010470;product=IS5 family transposase;protein_id=QIE15697.1;transl_table=11 CP040687.1 Genbank pseudogene 2164217 2165233 . - . ID=gene-IXO1088_010475;Name=IXO1088_010475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010475;pseudo=true CP040687.1 Protein Homology CDS 2164217 2165233 . - 0 ID=cds-IXO1088_010475;Parent=gene-IXO1088_010475;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229360.1;locus_tag=IXO1088_010475;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2165356 2166759 . + . ID=gene-IXO1088_010480;Name=IXO1088_010480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010480 CP040687.1 Protein Homology CDS 2165356 2166759 . + 0 ID=cds-QIE15698.1;Parent=gene-IXO1088_010480;Dbxref=NCBI_GP:QIE15698.1;Name=QIE15698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636866.1;locus_tag=IXO1088_010480;product=class II fumarate hydratase;protein_id=QIE15698.1;transl_table=11 CP040687.1 Genbank gene 2166882 2167304 . - . ID=gene-IXO1088_010485;Name=IXO1088_010485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010485 CP040687.1 Protein Homology CDS 2166882 2167304 . - 0 ID=cds-QIE15699.1;Parent=gene-IXO1088_010485;Dbxref=NCBI_GP:QIE15699.1;Name=QIE15699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159043.1;locus_tag=IXO1088_010485;product=hypothetical protein;protein_id=QIE15699.1;transl_table=11 CP040687.1 Genbank gene 2167390 2167623 . + . ID=gene-IXO1088_010490;Name=IXO1088_010490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010490 CP040687.1 Protein Homology CDS 2167390 2167623 . + 0 ID=cds-QIE15700.1;Parent=gene-IXO1088_010490;Dbxref=NCBI_GP:QIE15700.1;Name=QIE15700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304040.1;locus_tag=IXO1088_010490;product=hypothetical protein;protein_id=QIE15700.1;transl_table=11 CP040687.1 Genbank pseudogene 2167690 2167881 . - . ID=gene-IXO1088_010495;Name=IXO1088_010495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010495;pseudo=true CP040687.1 Protein Homology CDS 2167690 2167881 . - 0 ID=cds-IXO1088_010495;Parent=gene-IXO1088_010495;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008578096.1;locus_tag=IXO1088_010495;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2167937 2168773 . - . ID=gene-IXO1088_010500;Name=IXO1088_010500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010500 CP040687.1 Protein Homology CDS 2167937 2168773 . - 0 ID=cds-QIE15701.1;Parent=gene-IXO1088_010500;Dbxref=NCBI_GP:QIE15701.1;Name=QIE15701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849098.1;locus_tag=IXO1088_010500;product=DUF4097 domain-containing protein;protein_id=QIE15701.1;transl_table=11 CP040687.1 Genbank gene 2168783 2169769 . - . ID=gene-IXO1088_010505;Name=IXO1088_010505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010505 CP040687.1 Protein Homology CDS 2168783 2169769 . - 0 ID=cds-QIE15702.1;Parent=gene-IXO1088_010505;Dbxref=NCBI_GP:QIE15702.1;Name=QIE15702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636870.1;locus_tag=IXO1088_010505;product=ABC transporter permease;protein_id=QIE15702.1;transl_table=11 CP040687.1 Genbank gene 2169766 2170641 . - . ID=gene-IXO1088_010510;Name=IXO1088_010510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010510 CP040687.1 Protein Homology CDS 2169766 2170641 . - 0 ID=cds-QIE15703.1;Parent=gene-IXO1088_010510;Dbxref=NCBI_GP:QIE15703.1;Name=QIE15703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636871.1;locus_tag=IXO1088_010510;product=ABC transporter ATP-binding protein;protein_id=QIE15703.1;transl_table=11 CP040687.1 Genbank gene 2170638 2171000 . - . ID=gene-IXO1088_010515;Name=IXO1088_010515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010515 CP040687.1 Protein Homology CDS 2170638 2171000 . - 0 ID=cds-QIE15704.1;Parent=gene-IXO1088_010515;Dbxref=NCBI_GP:QIE15704.1;Name=QIE15704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636872.1;locus_tag=IXO1088_010515;product=GntR family transcriptional regulator;protein_id=QIE15704.1;transl_table=11 CP040687.1 Genbank gene 2171003 2171251 . - . ID=gene-IXO1088_010520;Name=IXO1088_010520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010520 CP040687.1 Protein Homology CDS 2171003 2171251 . - 0 ID=cds-QIE15705.1;Parent=gene-IXO1088_010520;Dbxref=NCBI_GP:QIE15705.1;Name=QIE15705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366438.1;locus_tag=IXO1088_010520;product=hypothetical protein;protein_id=QIE15705.1;transl_table=11 CP040687.1 Genbank gene 2171387 2171944 . + . ID=gene-IXO1088_010525;Name=IXO1088_010525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010525 CP040687.1 Protein Homology CDS 2171387 2171944 . + 0 ID=cds-QIE15706.1;Parent=gene-IXO1088_010525;Dbxref=NCBI_GP:QIE15706.1;Name=QIE15706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636873.1;locus_tag=IXO1088_010525;product=glutathione peroxidase;protein_id=QIE15706.1;transl_table=11 CP040687.1 Genbank gene 2172036 2173001 . + . ID=gene-IXO1088_010530;Name=IXO1088_010530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010530 CP040687.1 Protein Homology CDS 2172036 2173001 . + 0 ID=cds-QIE17949.1;Parent=gene-IXO1088_010530;Dbxref=NCBI_GP:QIE17949.1;Name=QIE17949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463036.1;locus_tag=IXO1088_010530;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=QIE17949.1;transl_table=11 CP040687.1 Genbank gene 2173027 2174376 . + . ID=gene-IXO1088_010535;Name=IXO1088_010535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010535 CP040687.1 Protein Homology CDS 2173027 2174376 . + 0 ID=cds-QIE15707.1;Parent=gene-IXO1088_010535;Dbxref=NCBI_GP:QIE15707.1;Name=QIE15707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636875.1;locus_tag=IXO1088_010535;product=UDP-glucose/GDP-mannose dehydrogenase family protein;protein_id=QIE15707.1;transl_table=11 CP040687.1 Genbank gene 2174369 2174605 . + . ID=gene-IXO1088_010540;Name=IXO1088_010540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010540 CP040687.1 Protein Homology CDS 2174369 2174605 . + 0 ID=cds-QIE15708.1;Parent=gene-IXO1088_010540;Dbxref=NCBI_GP:QIE15708.1;Name=QIE15708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636876.1;locus_tag=IXO1088_010540;product=protein SlyX;protein_id=QIE15708.1;transl_table=11 CP040687.1 Genbank gene 2174606 2175358 . + . ID=gene-IXO1088_010545;Name=IXO1088_010545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010545 CP040687.1 Protein Homology CDS 2174606 2175358 . + 0 ID=cds-QIE15709.1;Parent=gene-IXO1088_010545;Dbxref=NCBI_GP:QIE15709.1;Name=QIE15709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636877.1;locus_tag=IXO1088_010545;product=DUF2058 family protein;protein_id=QIE15709.1;transl_table=11 CP040687.1 Genbank gene 2175692 2176537 . + . ID=gene-IXO1088_010550;Name=IXO1088_010550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010550 CP040687.1 Protein Homology CDS 2175692 2176537 . + 0 ID=cds-QIE15710.1;Parent=gene-IXO1088_010550;Dbxref=NCBI_GP:QIE15710.1;Name=QIE15710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156809.1;locus_tag=IXO1088_010550;product=transporter;protein_id=QIE15710.1;transl_table=11 CP040687.1 Genbank gene 2176678 2177853 . + . ID=gene-IXO1088_010555;Name=IXO1088_010555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010555 CP040687.1 Protein Homology CDS 2176678 2177853 . + 0 ID=cds-QIE15711.1;Parent=gene-IXO1088_010555;Dbxref=NCBI_GP:QIE15711.1;Name=QIE15711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156810.1;locus_tag=IXO1088_010555;product=substrate-binding domain-containing protein;protein_id=QIE15711.1;transl_table=11 CP040687.1 Genbank gene 2177867 2179177 . + . ID=gene-IXO1088_010560;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=IXO1088_010560 CP040687.1 Protein Homology CDS 2177867 2179177 . + 0 ID=cds-QIE15712.1;Parent=gene-IXO1088_010560;Dbxref=NCBI_GP:QIE15712.1;Name=QIE15712.1;gbkey=CDS;gene=fucP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636880.1;locus_tag=IXO1088_010560;product=L-fucose:H+ symporter permease;protein_id=QIE15712.1;transl_table=11 CP040687.1 Genbank gene 2179102 2180160 . + . ID=gene-IXO1088_010565;Name=IXO1088_010565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010565 CP040687.1 Protein Homology CDS 2179102 2180160 . + 0 ID=cds-QIE15713.1;Parent=gene-IXO1088_010565;Dbxref=NCBI_GP:QIE15713.1;Name=QIE15713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636881.1;locus_tag=IXO1088_010565;product=carbohydrate kinase;protein_id=QIE15713.1;transl_table=11 CP040687.1 Genbank gene 2180157 2181362 . + . ID=gene-IXO1088_010570;Name=IXO1088_010570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010570 CP040687.1 Protein Homology CDS 2180157 2181362 . + 0 ID=cds-QIE15714.1;Parent=gene-IXO1088_010570;Dbxref=NCBI_GP:QIE15714.1;Name=QIE15714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258783.1;locus_tag=IXO1088_010570;product=AGE family epimerase/isomerase;protein_id=QIE15714.1;transl_table=11 CP040687.1 Genbank gene 2181459 2182415 . + . ID=gene-IXO1088_010575;Name=IXO1088_010575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010575 CP040687.1 Protein Homology CDS 2181459 2182415 . + 0 ID=cds-QIE15715.1;Parent=gene-IXO1088_010575;Dbxref=NCBI_GP:QIE15715.1;Name=QIE15715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1088_010575;product=IS30 family transposase;protein_id=QIE15715.1;transl_table=11 CP040687.1 Genbank gene 2182807 2185560 . - . ID=gene-IXO1088_010580;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=IXO1088_010580 CP040687.1 Protein Homology CDS 2182807 2185560 . - 0 ID=cds-QIE15716.1;Parent=gene-IXO1088_010580;Dbxref=NCBI_GP:QIE15716.1;Name=QIE15716.1;gbkey=CDS;gene=metH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301935.1;locus_tag=IXO1088_010580;product=methionine synthase;protein_id=QIE15716.1;transl_table=11 CP040687.1 Genbank gene 2185703 2186842 . - . ID=gene-IXO1088_010585;Name=IXO1088_010585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010585 CP040687.1 Protein Homology CDS 2185703 2186842 . - 0 ID=cds-QIE15717.1;Parent=gene-IXO1088_010585;Dbxref=NCBI_GP:QIE15717.1;Name=QIE15717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380164.1;locus_tag=IXO1088_010585;product=5-methyltetrahydrofolate--homocysteine methyltransferase;protein_id=QIE15717.1;transl_table=11 CP040687.1 Genbank gene 2186839 2187834 . - . ID=gene-IXO1088_010590;Name=IXO1088_010590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010590 CP040687.1 Protein Homology CDS 2186839 2187834 . - 0 ID=cds-QIE15718.1;Parent=gene-IXO1088_010590;Dbxref=NCBI_GP:QIE15718.1;Name=QIE15718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017164067.1;locus_tag=IXO1088_010590;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=QIE15718.1;transl_table=11 CP040687.1 Genbank gene 2187956 2189104 . + . ID=gene-IXO1088_010595;Name=IXO1088_010595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010595 CP040687.1 Protein Homology CDS 2187956 2189104 . + 0 ID=cds-QIE17950.1;Parent=gene-IXO1088_010595;Dbxref=NCBI_GP:QIE17950.1;Name=QIE17950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636886.1;locus_tag=IXO1088_010595;product=acyl-CoA dehydrogenase;protein_id=QIE17950.1;transl_table=11 CP040687.1 Genbank gene 2189104 2189244 . + . ID=gene-IXO1088_010600;Name=IXO1088_010600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010600 CP040687.1 Protein Homology CDS 2189104 2189244 . + 0 ID=cds-QIE15719.1;Parent=gene-IXO1088_010600;Dbxref=NCBI_GP:QIE15719.1;Name=QIE15719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258788.1;locus_tag=IXO1088_010600;product=acyl-CoA dehydrogenase;protein_id=QIE15719.1;transl_table=11 CP040687.1 Genbank gene 2189307 2189383 . + . ID=gene-IXO1088_010605;Name=IXO1088_010605;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_010605 CP040687.1 cmsearch ncRNA 2189307 2189383 . + . ID=rna-IXO1088_010605;Parent=gene-IXO1088_010605;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_010605;product=sX9 sRNA CP040687.1 cmsearch exon 2189307 2189383 . + . ID=exon-IXO1088_010605-1;Parent=rna-IXO1088_010605;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_010605;product=sX9 sRNA CP040687.1 Genbank gene 2189438 2189662 . - . ID=gene-IXO1088_010610;Name=IXO1088_010610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010610 CP040687.1 Protein Homology CDS 2189438 2189662 . - 0 ID=cds-QIE17951.1;Parent=gene-IXO1088_010610;Dbxref=NCBI_GP:QIE17951.1;Name=QIE17951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366464.1;locus_tag=IXO1088_010610;product=hypothetical protein;protein_id=QIE17951.1;transl_table=11 CP040687.1 Genbank gene 2189616 2191061 . + . ID=gene-IXO1088_010615;Name=IXO1088_010615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010615 CP040687.1 Protein Homology CDS 2189616 2191061 . + 0 ID=cds-QIE15720.1;Parent=gene-IXO1088_010615;Dbxref=NCBI_GP:QIE15720.1;Name=QIE15720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305301.1;locus_tag=IXO1088_010615;product=acetylhydrolase;protein_id=QIE15720.1;transl_table=11 CP040687.1 Genbank gene 2191420 2191506 . - . ID=gene-IXO1088_010620;Name=IXO1088_010620;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_010620 CP040687.1 tRNAscan-SE tRNA 2191420 2191506 . - . ID=rna-IXO1088_010620;Parent=gene-IXO1088_010620;anticodon=(pos:complement(2191470..2191472));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_010620;product=tRNA-Leu CP040687.1 tRNAscan-SE exon 2191420 2191506 . - . ID=exon-IXO1088_010620-1;Parent=rna-IXO1088_010620;anticodon=(pos:complement(2191470..2191472));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_010620;product=tRNA-Leu CP040687.1 Genbank gene 2191628 2194156 . + . ID=gene-IXO1088_010625;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=IXO1088_010625 CP040687.1 Protein Homology CDS 2191628 2194156 . + 0 ID=cds-QIE15721.1;Parent=gene-IXO1088_010625;Dbxref=NCBI_GP:QIE15721.1;Name=QIE15721.1;gbkey=CDS;gene=rnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445121.1;locus_tag=IXO1088_010625;product=ribonuclease R;protein_id=QIE15721.1;transl_table=11 CP040687.1 Genbank gene 2194420 2194496 . + . ID=gene-IXO1088_010630;Name=IXO1088_010630;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_010630 CP040687.1 cmsearch ncRNA 2194420 2194496 . + . ID=rna-IXO1088_010630;Parent=gene-IXO1088_010630;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_010630;product=sX9 sRNA CP040687.1 cmsearch exon 2194420 2194496 . + . ID=exon-IXO1088_010630-1;Parent=rna-IXO1088_010630;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_010630;product=sX9 sRNA CP040687.1 Genbank pseudogene 2194577 2195051 . + . ID=gene-IXO1088_010635;Name=IXO1088_010635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010635;pseudo=true CP040687.1 Protein Homology CDS 2194577 2195051 . + 0 ID=cds-IXO1088_010635;Parent=gene-IXO1088_010635;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636889.1;locus_tag=IXO1088_010635;product=GFA family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2195384 2196151 . + . ID=gene-IXO1088_010640;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=IXO1088_010640 CP040687.1 Protein Homology CDS 2195384 2196151 . + 0 ID=cds-QIE15722.1;Parent=gene-IXO1088_010640;Dbxref=NCBI_GP:QIE15722.1;Name=QIE15722.1;gbkey=CDS;gene=rlmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445119.1;locus_tag=IXO1088_010640;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=QIE15722.1;transl_table=11 CP040687.1 Genbank gene 2196204 2197439 . - . ID=gene-IXO1088_010645;Name=IXO1088_010645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010645 CP040687.1 Protein Homology CDS 2196204 2197439 . - 0 ID=cds-QIE15723.1;Parent=gene-IXO1088_010645;Dbxref=NCBI_GP:QIE15723.1;Name=QIE15723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1088_010645;product=ISL3 family transposase;protein_id=QIE15723.1;transl_table=11 CP040687.1 Genbank pseudogene 2197529 2197621 . - . ID=gene-IXO1088_010650;Name=IXO1088_010650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010650;pseudo=true CP040687.1 Protein Homology CDS 2197529 2197621 . - 0 ID=cds-IXO1088_010650;Parent=gene-IXO1088_010650;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258967.1;locus_tag=IXO1088_010650;product=glyoxalase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2197624 2198592 . + . ID=gene-IXO1088_010655;Name=IXO1088_010655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010655 CP040687.1 Protein Homology CDS 2197624 2198592 . + 0 ID=cds-QIE15724.1;Parent=gene-IXO1088_010655;Dbxref=NCBI_GP:QIE15724.1;Name=QIE15724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_010655;product=IS5-like element ISXo1 family transposase;protein_id=QIE15724.1;transl_table=11 CP040687.1 Genbank pseudogene 2198805 2199379 . - . ID=gene-IXO1088_010660;Name=IXO1088_010660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010660;pseudo=true CP040687.1 Protein Homology CDS 2198805 2199379 . - 0 ID=cds-IXO1088_010660;Parent=gene-IXO1088_010660;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_010660;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2199423 2200068 . + . ID=gene-IXO1088_010665;Name=IXO1088_010665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010665;pseudo=true CP040687.1 Protein Homology CDS 2199423 2200068 . + 0 ID=cds-IXO1088_010665;Parent=gene-IXO1088_010665;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_010665;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2200159 2200555 . + . ID=gene-IXO1088_010670;Name=IXO1088_010670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010670;pseudo=true CP040687.1 Protein Homology CDS 2200159 2200555 . + 0 ID=cds-IXO1088_010670;Parent=gene-IXO1088_010670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1088_010670;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2200557 2200709 . + . ID=gene-IXO1088_010675;Name=IXO1088_010675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010675;pseudo=true CP040687.1 Protein Homology CDS 2200557 2200709 . + 0 ID=cds-IXO1088_010675;Parent=gene-IXO1088_010675;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557964.1;locus_tag=IXO1088_010675;product=IS256 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2200764 2202238 . - . ID=gene-IXO1088_010680;Name=IXO1088_010680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010680;pseudo=true CP040687.1 Protein Homology CDS 2200764 2202238 . - 0 ID=cds-IXO1088_010680;Parent=gene-IXO1088_010680;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1088_010680;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2202561 2202743 . - . ID=gene-IXO1088_010685;Name=IXO1088_010685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010685 CP040687.1 Protein Homology CDS 2202561 2202743 . - 0 ID=cds-QIE15725.1;Parent=gene-IXO1088_010685;Dbxref=NCBI_GP:QIE15725.1;Name=QIE15725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258799.1;locus_tag=IXO1088_010685;product=cold shock domain-containing protein;protein_id=QIE15725.1;transl_table=11 CP040687.1 Genbank gene 2202892 2204091 . - . ID=gene-IXO1088_010690;Name=IXO1088_010690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010690 CP040687.1 Protein Homology CDS 2202892 2204091 . - 0 ID=cds-QIE15726.1;Parent=gene-IXO1088_010690;Dbxref=NCBI_GP:QIE15726.1;Name=QIE15726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637584.1;locus_tag=IXO1088_010690;product=homoserine O-acetyltransferase;protein_id=QIE15726.1;transl_table=11 CP040687.1 Genbank pseudogene 2204286 2205603 . + . ID=gene-IXO1088_010695;Name=IXO1088_010695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010695;pseudo=true CP040687.1 Protein Homology CDS 2204286 2205603 . + 0 ID=cds-IXO1088_010695;Parent=gene-IXO1088_010695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_010695;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2205796 2205876 . - . ID=gene-IXO1088_010700;Name=IXO1088_010700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010700;pseudo=true CP040687.1 Protein Homology CDS 2205796 2205876 . - 0 ID=cds-IXO1088_010700;Parent=gene-IXO1088_010700;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257538.1;locus_tag=IXO1088_010700;product=alcohol dehydrogenase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2205913 2207127 . + . ID=gene-IXO1088_010705;Name=IXO1088_010705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010705 CP040687.1 Protein Homology CDS 2205913 2207127 . + 0 ID=cds-QIE15727.1;Parent=gene-IXO1088_010705;Dbxref=NCBI_GP:QIE15727.1;Name=QIE15727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1088_010705;product=IS4 family transposase;protein_id=QIE15727.1;transl_table=11 CP040687.1 Genbank pseudogene 2207228 2207803 . - . ID=gene-IXO1088_010710;Name=IXO1088_010710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010710;pseudo=true CP040687.1 Protein Homology CDS 2207228 2207803 . - 0 ID=cds-IXO1088_010710;Parent=gene-IXO1088_010710;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_010710;product=IS701-like element ISXo15 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2207931 2208896 . - . ID=gene-IXO1088_010715;Name=IXO1088_010715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010715 CP040687.1 Protein Homology CDS 2207931 2208896 . - 0 ID=cds-QIE15728.1;Parent=gene-IXO1088_010715;Dbxref=NCBI_GP:QIE15728.1;Name=QIE15728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_010715;product=IS1595-like element ISXo5 family transposase;protein_id=QIE15728.1;transl_table=11 CP040687.1 Genbank pseudogene 2208985 2209723 . + . ID=gene-IXO1088_010720;Name=IXO1088_010720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010720;pseudo=true CP040687.1 Protein Homology CDS 2208985 2209723 . + 0 ID=cds-IXO1088_010720;Parent=gene-IXO1088_010720;Note=programmed frameshift%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_010720;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2209719 2210465 . - . ID=gene-IXO1088_010725;Name=IXO1088_010725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010725;pseudo=true CP040687.1 Protein Homology CDS 2209719 2210465 . - 0 ID=cds-IXO1088_010725;Parent=gene-IXO1088_010725;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_010725;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2210560 2210880 . + . ID=gene-IXO1088_010730;Name=IXO1088_010730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010730;pseudo=true CP040687.1 Protein Homology CDS 2210560 2210880 . + 0 ID=cds-IXO1088_010730;Parent=gene-IXO1088_010730;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347842.1;locus_tag=IXO1088_010730;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2210913 2212015 . - . ID=gene-IXO1088_010735;Name=IXO1088_010735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010735 CP040687.1 Protein Homology CDS 2211760 2212015 . - 0 ID=cds-QIE15729.1;Parent=gene-IXO1088_010735;Dbxref=NCBI_GP:QIE15729.1;Name=QIE15729.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=IXO1088_010735;product=IS3 family transposase;protein_id=QIE15729.1;transl_table=11 CP040687.1 Protein Homology CDS 2210913 2211760 . - 2 ID=cds-QIE15729.1;Parent=gene-IXO1088_010735;Dbxref=NCBI_GP:QIE15729.1;Name=QIE15729.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=IXO1088_010735;product=IS3 family transposase;protein_id=QIE15729.1;transl_table=11 CP040687.1 Genbank gene 2212202 2212669 . - . ID=gene-IXO1088_010740;Name=IXO1088_010740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010740 CP040687.1 Protein Homology CDS 2212202 2212669 . - 0 ID=cds-QIE17952.1;Parent=gene-IXO1088_010740;Dbxref=NCBI_GP:QIE17952.1;Name=QIE17952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158182.1;locus_tag=IXO1088_010740;product=energy transducer TonB;protein_id=QIE17952.1;transl_table=11 CP040687.1 Genbank gene 2213030 2213794 . - . ID=gene-IXO1088_010745;Name=IXO1088_010745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010745 CP040687.1 Protein Homology CDS 2213030 2213794 . - 0 ID=cds-QIE15730.1;Parent=gene-IXO1088_010745;Dbxref=NCBI_GP:QIE15730.1;Name=QIE15730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007969976.1;locus_tag=IXO1088_010745;product=energy transducer TonB;protein_id=QIE15730.1;transl_table=11 CP040687.1 Genbank gene 2213801 2215150 . + . ID=gene-IXO1088_010750;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=IXO1088_010750 CP040687.1 Protein Homology CDS 2213801 2215150 . + 0 ID=cds-QIE17953.1;Parent=gene-IXO1088_010750;Dbxref=NCBI_GP:QIE17953.1;Name=QIE17953.1;gbkey=CDS;gene=serS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636965.1;locus_tag=IXO1088_010750;product=serine--tRNA ligase;protein_id=QIE17953.1;transl_table=11 CP040687.1 Genbank gene 2215210 2215284 . + . ID=gene-IXO1088_010755;Name=IXO1088_010755;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_010755 CP040687.1 cmsearch ncRNA 2215210 2215284 . + . ID=rna-IXO1088_010755;Parent=gene-IXO1088_010755;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_010755;product=sX9 sRNA CP040687.1 cmsearch exon 2215210 2215284 . + . ID=exon-IXO1088_010755-1;Parent=rna-IXO1088_010755;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_010755;product=sX9 sRNA CP040687.1 Genbank gene 2215300 2216098 . - . ID=gene-IXO1088_010760;Name=IXO1088_010760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010760 CP040687.1 Protein Homology CDS 2215827 2216098 . - 0 ID=cds-QIE15731.1;Parent=gene-IXO1088_010760;Dbxref=NCBI_GP:QIE15731.1;Name=QIE15731.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_010760;product=IS5 family transposase;protein_id=QIE15731.1;transl_table=11 CP040687.1 Protein Homology CDS 2215300 2215828 . - 1 ID=cds-QIE15731.1;Parent=gene-IXO1088_010760;Dbxref=NCBI_GP:QIE15731.1;Name=QIE15731.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_010760;product=IS5 family transposase;protein_id=QIE15731.1;transl_table=11 CP040687.1 Genbank gene 2216538 2217857 . + . ID=gene-IXO1088_010765;Name=IXO1088_010765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010765 CP040687.1 Protein Homology CDS 2216538 2217857 . + 0 ID=cds-QIE15732.1;Parent=gene-IXO1088_010765;Dbxref=NCBI_GP:QIE15732.1;Name=QIE15732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_010765;product=IS701 family transposase;protein_id=QIE15732.1;transl_table=11 CP040687.1 Genbank gene 2218070 2219038 . - . ID=gene-IXO1088_010770;Name=IXO1088_010770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010770 CP040687.1 Protein Homology CDS 2218070 2219038 . - 0 ID=cds-QIE15733.1;Parent=gene-IXO1088_010770;Dbxref=NCBI_GP:QIE15733.1;Name=QIE15733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_010770;product=IS5-like element ISXo1 family transposase;protein_id=QIE15733.1;transl_table=11 CP040687.1 Genbank gene 2219102 2219686 . - . ID=gene-IXO1088_010775;Name=IXO1088_010775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010775 CP040687.1 Protein Homology CDS 2219102 2219686 . - 0 ID=cds-QIE15734.1;Parent=gene-IXO1088_010775;Dbxref=NCBI_GP:QIE15734.1;Name=QIE15734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158185.1;locus_tag=IXO1088_010775;product=FMN-dependent NADH-azoreductase;protein_id=QIE15734.1;transl_table=11 CP040687.1 Genbank gene 2219786 2220799 . + . ID=gene-IXO1088_010780;Name=IXO1088_010780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010780 CP040687.1 Protein Homology CDS 2219786 2220799 . + 0 ID=cds-QIE15735.1;Parent=gene-IXO1088_010780;Dbxref=NCBI_GP:QIE15735.1;Name=QIE15735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636966.1;locus_tag=IXO1088_010780;product=LysR family transcriptional regulator;protein_id=QIE15735.1;transl_table=11 CP040687.1 Genbank gene 2221176 2221265 . + . ID=gene-IXO1088_010785;Name=IXO1088_010785;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_010785 CP040687.1 tRNAscan-SE tRNA 2221176 2221265 . + . ID=rna-IXO1088_010785;Parent=gene-IXO1088_010785;anticodon=(pos:2221210..2221212);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_010785;product=tRNA-Ser CP040687.1 tRNAscan-SE exon 2221176 2221265 . + . ID=exon-IXO1088_010785-1;Parent=rna-IXO1088_010785;anticodon=(pos:2221210..2221212);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_010785;product=tRNA-Ser CP040687.1 Genbank pseudogene 2221412 2221960 . + . ID=gene-IXO1088_010790;Name=IXO1088_010790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010790;pseudo=true CP040687.1 Protein Homology CDS 2221412 2221960 . + 0 ID=cds-IXO1088_010790;Parent=gene-IXO1088_010790;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365215.1;locus_tag=IXO1088_010790;product=integrase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2222000 2222095 . - . ID=gene-IXO1088_010795;Name=IXO1088_010795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010795 CP040687.1 Protein Homology CDS 2222000 2222095 . - 0 ID=cds-QIE17954.1;Parent=gene-IXO1088_010795;Dbxref=NCBI_GP:QIE17954.1;Name=QIE17954.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13333.4;locus_tag=IXO1088_010795;product=hypothetical protein;protein_id=QIE17954.1;transl_table=11 CP040687.1 Genbank gene 2222169 2225771 . - . ID=gene-IXO1088_010800;Name=IXO1088_010800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010800 CP040687.1 Protein Homology CDS 2222169 2225771 . - 0 ID=cds-QIE15736.1;Parent=gene-IXO1088_010800;Dbxref=NCBI_GP:QIE15736.1;Name=QIE15736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258827.1;locus_tag=IXO1088_010800;product=Avirulence protein AvrBs3;protein_id=QIE15736.1;transl_table=11 CP040687.1 Genbank gene 2225911 2226210 . - . ID=gene-IXO1088_010805;Name=IXO1088_010805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010805 CP040687.1 Protein Homology CDS 2225911 2226210 . - 0 ID=cds-QIE15737.1;Parent=gene-IXO1088_010805;Dbxref=NCBI_GP:QIE15737.1;Name=QIE15737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408930.1;locus_tag=IXO1088_010805;product=hypothetical protein;protein_id=QIE15737.1;transl_table=11 CP040687.1 Genbank gene 2226214 2226408 . - . ID=gene-IXO1088_010810;Name=IXO1088_010810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010810 CP040687.1 Protein Homology CDS 2226214 2226408 . - 0 ID=cds-QIE15738.1;Parent=gene-IXO1088_010810;Dbxref=NCBI_GP:QIE15738.1;Name=QIE15738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444931.1;locus_tag=IXO1088_010810;product=hypothetical protein;protein_id=QIE15738.1;transl_table=11 CP040687.1 Genbank gene 2226677 2230279 . - . ID=gene-IXO1088_010815;Name=IXO1088_010815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010815 CP040687.1 Protein Homology CDS 2226677 2230279 . - 0 ID=cds-QIE15739.1;Parent=gene-IXO1088_010815;Dbxref=NCBI_GP:QIE15739.1;Name=QIE15739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258829.1;locus_tag=IXO1088_010815;product=Avirulence protein AvrBs3;protein_id=QIE15739.1;transl_table=11 CP040687.1 Genbank pseudogene 2230349 2230420 . + . ID=gene-IXO1088_010820;Name=IXO1088_010820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010820;pseudo=true CP040687.1 Protein Homology CDS 2230349 2230420 . + 0 ID=cds-IXO1088_010820;Parent=gene-IXO1088_010820;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472946.1;locus_tag=IXO1088_010820;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2230530 2231681 . + . ID=gene-IXO1088_010825;Name=IXO1088_010825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010825;pseudo=true CP040687.1 Protein Homology CDS 2230530 2231681 . + 0 ID=cds-IXO1088_010825;Parent=gene-IXO1088_010825;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558168.1;locus_tag=IXO1088_010825;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2231831 2233322 . - . ID=gene-IXO1088_010830;Name=IXO1088_010830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010830;pseudo=true CP040687.1 Protein Homology CDS 2231831 2233322 . - 0 ID=cds-IXO1088_010830;Parent=gene-IXO1088_010830;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1088_010830;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2233463 2236777 . - . ID=gene-IXO1088_010835;Name=IXO1088_010835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010835 CP040687.1 Protein Homology CDS 2233463 2236777 . - 0 ID=cds-QIE15740.1;Parent=gene-IXO1088_010835;Dbxref=NCBI_GP:QIE15740.1;Name=QIE15740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408492.1;locus_tag=IXO1088_010835;product=avirulence protein;protein_id=QIE15740.1;transl_table=11 CP040687.1 Genbank gene 2236996 2238384 . - . ID=gene-IXO1088_010840;Name=IXO1088_010840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010840 CP040687.1 Protein Homology CDS 2236996 2238384 . - 0 ID=cds-QIE15741.1;Parent=gene-IXO1088_010840;Dbxref=NCBI_GP:QIE15741.1;Name=QIE15741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408780.1;locus_tag=IXO1088_010840;product=IS701 family transposase;protein_id=QIE15741.1;transl_table=11 CP040687.1 Genbank gene 2238482 2239539 . + . ID=gene-IXO1088_010845;Name=IXO1088_010845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010845 CP040687.1 Protein Homology CDS 2238482 2239058 . + 0 ID=cds-QIE15742.1;Parent=gene-IXO1088_010845;Dbxref=NCBI_GP:QIE15742.1;Name=QIE15742.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257047.1;locus_tag=IXO1088_010845;product=IS630 family transposase;protein_id=QIE15742.1;transl_table=11 CP040687.1 Protein Homology CDS 2239058 2239539 . + 2 ID=cds-QIE15742.1;Parent=gene-IXO1088_010845;Dbxref=NCBI_GP:QIE15742.1;Name=QIE15742.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257047.1;locus_tag=IXO1088_010845;product=IS630 family transposase;protein_id=QIE15742.1;transl_table=11 CP040687.1 Genbank gene 2239627 2241531 . - . ID=gene-IXO1088_010850;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=IXO1088_010850 CP040687.1 Protein Homology CDS 2239627 2241531 . - 0 ID=cds-QIE15743.1;Parent=gene-IXO1088_010850;Dbxref=NCBI_GP:QIE15743.1;Name=QIE15743.1;gbkey=CDS;gene=htpG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303855.1;locus_tag=IXO1088_010850;product=molecular chaperone HtpG;protein_id=QIE15743.1;transl_table=11 CP040687.1 Genbank gene 2241772 2242392 . + . ID=gene-IXO1088_010855;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=IXO1088_010855 CP040687.1 Protein Homology CDS 2241772 2242392 . + 0 ID=cds-QIE15744.1;Parent=gene-IXO1088_010855;Dbxref=NCBI_GP:QIE15744.1;Name=QIE15744.1;gbkey=CDS;gene=rsmD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637746.1;locus_tag=IXO1088_010855;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=QIE15744.1;transl_table=11 CP040687.1 Genbank gene 2242389 2242895 . + . ID=gene-IXO1088_010860;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=IXO1088_010860 CP040687.1 Protein Homology CDS 2242389 2242895 . + 0 ID=cds-QIE15745.1;Parent=gene-IXO1088_010860;Dbxref=NCBI_GP:QIE15745.1;Name=QIE15745.1;gbkey=CDS;gene=coaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372369.1;locus_tag=IXO1088_010860;product=pantetheine-phosphate adenylyltransferase;protein_id=QIE15745.1;transl_table=11 CP040687.1 Genbank gene 2242954 2243439 . + . ID=gene-IXO1088_010865;Name=IXO1088_010865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010865 CP040687.1 Protein Homology CDS 2242954 2243439 . + 0 ID=cds-QIE17955.1;Parent=gene-IXO1088_010865;Dbxref=NCBI_GP:QIE17955.1;Name=QIE17955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637744.1;locus_tag=IXO1088_010865;product=hypothetical protein;protein_id=QIE17955.1;transl_table=11 CP040687.1 Genbank gene 2243498 2243680 . + . ID=gene-IXO1088_010870;Name=IXO1088_010870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010870 CP040687.1 Protein Homology CDS 2243498 2243680 . + 0 ID=cds-QIE15746.1;Parent=gene-IXO1088_010870;Dbxref=NCBI_GP:QIE15746.1;Name=QIE15746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920364.1;locus_tag=IXO1088_010870;product=hypothetical protein;protein_id=QIE15746.1;transl_table=11 CP040687.1 Genbank gene 2243671 2243955 . + . ID=gene-IXO1088_010875;Name=IXO1088_010875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010875 CP040687.1 Protein Homology CDS 2243671 2243955 . + 0 ID=cds-QIE15747.1;Parent=gene-IXO1088_010875;Dbxref=NCBI_GP:QIE15747.1;Name=QIE15747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637743.1;locus_tag=IXO1088_010875;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=QIE15747.1;transl_table=11 CP040687.1 Genbank gene 2243952 2245745 . + . ID=gene-IXO1088_010880;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=IXO1088_010880 CP040687.1 Protein Homology CDS 2243952 2245745 . + 0 ID=cds-QIE15748.1;Parent=gene-IXO1088_010880;Dbxref=NCBI_GP:QIE15748.1;Name=QIE15748.1;gbkey=CDS;gene=ggt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408648.1;locus_tag=IXO1088_010880;product=gamma-glutamyltransferase;protein_id=QIE15748.1;transl_table=11 CP040687.1 Genbank gene 2245752 2246783 . - . ID=gene-IXO1088_010885;Name=IXO1088_010885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010885 CP040687.1 Protein Homology CDS 2245752 2246783 . - 0 ID=cds-QIE15749.1;Parent=gene-IXO1088_010885;Dbxref=NCBI_GP:QIE15749.1;Name=QIE15749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444766.1;locus_tag=IXO1088_010885;product=IS630 family transposase;protein_id=QIE15749.1;transl_table=11 CP040687.1 Genbank gene 2247063 2247826 . - . ID=gene-IXO1088_010890;Name=IXO1088_010890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010890 CP040687.1 Protein Homology CDS 2247511 2247826 . - 0 ID=cds-QIE15750.1;Parent=gene-IXO1088_010890;Dbxref=NCBI_GP:QIE15750.1;Name=QIE15750.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_010890;product=IS5 family transposase;protein_id=QIE15750.1;transl_table=11 CP040687.1 Protein Homology CDS 2247063 2247511 . - 2 ID=cds-QIE15750.1;Parent=gene-IXO1088_010890;Dbxref=NCBI_GP:QIE15750.1;Name=QIE15750.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_010890;product=IS5 family transposase;protein_id=QIE15750.1;transl_table=11 CP040687.1 Genbank gene 2248130 2248205 . + . ID=gene-IXO1088_010895;Name=IXO1088_010895;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_010895 CP040687.1 cmsearch ncRNA 2248130 2248205 . + . ID=rna-IXO1088_010895;Parent=gene-IXO1088_010895;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_010895;product=sX9 sRNA CP040687.1 cmsearch exon 2248130 2248205 . + . ID=exon-IXO1088_010895-1;Parent=rna-IXO1088_010895;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_010895;product=sX9 sRNA CP040687.1 Genbank gene 2248223 2248855 . - . ID=gene-IXO1088_010900;Name=IXO1088_010900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010900 CP040687.1 Protein Homology CDS 2248223 2248855 . - 0 ID=cds-QIE17956.1;Parent=gene-IXO1088_010900;Dbxref=NCBI_GP:QIE17956.1;Name=QIE17956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637740.1;locus_tag=IXO1088_010900;product=uracil phosphoribosyltransferase;protein_id=QIE17956.1;transl_table=11 CP040687.1 Genbank pseudogene 2249048 2249356 . + . ID=gene-IXO1088_010905;Name=IXO1088_010905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010905;pseudo=true CP040687.1 Protein Homology CDS 2249048 2249356 . + 0 ID=cds-IXO1088_010905;Parent=gene-IXO1088_010905;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637739.1;locus_tag=IXO1088_010905;product=TonB-dependent receptor;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2249356 2249511 . - . ID=gene-IXO1088_010910;Name=IXO1088_010910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010910;pseudo=true CP040687.1 Protein Homology CDS 2249356 2249511 . - 0 ID=cds-IXO1088_010910;Parent=gene-IXO1088_010910;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258951.1;locus_tag=IXO1088_010910;product=pectate lyase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2249518 2251743 . + . ID=gene-IXO1088_010915;Name=IXO1088_010915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010915;pseudo=true CP040687.1 Protein Homology CDS 2249518 2251743 . + 0 ID=cds-IXO1088_010915;Parent=gene-IXO1088_010915;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637739.1;locus_tag=IXO1088_010915;product=TonB-dependent receptor;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2251740 2252861 . + . ID=gene-IXO1088_010920;Name=IXO1088_010920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010920 CP040687.1 Protein Homology CDS 2251740 2252861 . + 0 ID=cds-QIE15751.1;Parent=gene-IXO1088_010920;Dbxref=NCBI_GP:QIE15751.1;Name=QIE15751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851231.1;locus_tag=IXO1088_010920;product=phytase;protein_id=QIE15751.1;transl_table=11 CP040687.1 Genbank pseudogene 2252858 2253507 . + . ID=gene-IXO1088_010925;Name=IXO1088_010925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010925;pseudo=true CP040687.1 Protein Homology CDS 2252858 2253507 . + 0 ID=cds-IXO1088_010925;Parent=gene-IXO1088_010925;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051644.1;locus_tag=IXO1088_010925;product=phosphoesterase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2253527 2254087 . - . ID=gene-IXO1088_010930;Name=IXO1088_010930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010930;pseudo=true CP040687.1 Protein Homology CDS 2253527 2254087 . - 0 ID=cds-IXO1088_010930;Parent=gene-IXO1088_010930;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347842.1;locus_tag=IXO1088_010930;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2254310 2255266 . - . ID=gene-IXO1088_010935;Name=IXO1088_010935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010935 CP040687.1 Protein Homology CDS 2254310 2255266 . - 0 ID=cds-QIE15752.1;Parent=gene-IXO1088_010935;Dbxref=NCBI_GP:QIE15752.1;Name=QIE15752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1088_010935;product=IS30-like element IS1112b family transposase;protein_id=QIE15752.1;transl_table=11 CP040687.1 Genbank pseudogene 2255360 2256553 . - . ID=gene-IXO1088_010940;Name=IXO1088_010940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010940;pseudo=true CP040687.1 Protein Homology CDS 2255360 2256553 . - 0 ID=cds-IXO1088_010940;Parent=gene-IXO1088_010940;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_010940;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2256701 2256781 . - . ID=gene-IXO1088_010945;Name=IXO1088_010945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010945;pseudo=true CP040687.1 Protein Homology CDS 2256701 2256781 . - 0 ID=cds-IXO1088_010945;Parent=gene-IXO1088_010945;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502738.1;locus_tag=IXO1088_010945;product=integrase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2256781 2257095 . - . ID=gene-IXO1088_010950;Name=IXO1088_010950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010950 CP040687.1 Protein Homology CDS 2256781 2257095 . - 0 ID=cds-QIE15753.1;Parent=gene-IXO1088_010950;Dbxref=NCBI_GP:QIE15753.1;Name=QIE15753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014403016.1;locus_tag=IXO1088_010950;product=DUF1153 domain-containing protein;protein_id=QIE15753.1;transl_table=11 CP040687.1 Genbank gene 2257028 2257987 . - . ID=gene-IXO1088_010955;Name=IXO1088_010955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010955 CP040687.1 Protein Homology CDS 2257028 2257987 . - 0 ID=cds-QIE15754.1;Parent=gene-IXO1088_010955;Dbxref=NCBI_GP:QIE15754.1;Name=QIE15754.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13546.4;locus_tag=IXO1088_010955;product=IS701 family transposase;protein_id=QIE15754.1;transl_table=11 CP040687.1 Genbank gene 2258142 2258531 . + . ID=gene-IXO1088_010960;Name=IXO1088_010960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010960 CP040687.1 Protein Homology CDS 2258142 2258531 . + 0 ID=cds-QIE15755.1;Parent=gene-IXO1088_010960;Dbxref=NCBI_GP:QIE15755.1;Name=QIE15755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408812.1;locus_tag=IXO1088_010960;product=type VI secretion protein;protein_id=QIE15755.1;transl_table=11 CP040687.1 Genbank pseudogene 2258571 2261870 . + . ID=gene-IXO1088_010965;Name=IXO1088_010965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010965;pseudo=true CP040687.1 Protein Homology CDS 2258571 2261870 . + 0 ID=cds-IXO1088_010965;Parent=gene-IXO1088_010965;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408490.1;locus_tag=IXO1088_010965;product=Avirulence protein AvrBs3;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2261927 2262046 . - . ID=gene-IXO1088_010970;Name=IXO1088_010970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010970;pseudo=true CP040687.1 Protein Homology CDS 2261927 2262046 . - 0 ID=cds-IXO1088_010970;Parent=gene-IXO1088_010970;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612184.1;locus_tag=IXO1088_010970;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2262069 2263213 . - . ID=gene-IXO1088_010975;Name=IXO1088_010975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010975;pseudo=true CP040687.1 Protein Homology CDS 2262069 2263213 . - 0 ID=cds-IXO1088_010975;Parent=gene-IXO1088_010975;Note=programmed frameshift%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=IXO1088_010975;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2263416 2266178 . + . ID=gene-IXO1088_010980;Name=IXO1088_010980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010980 CP040687.1 Protein Homology CDS 2263416 2266178 . + 0 ID=cds-QIE15756.1;Parent=gene-IXO1088_010980;Dbxref=NCBI_GP:QIE15756.1;Name=QIE15756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444636.1;locus_tag=IXO1088_010980;product=type VI secretion system tip protein VgrG;protein_id=QIE15756.1;transl_table=11 CP040687.1 Genbank gene 2266187 2267116 . + . ID=gene-IXO1088_010985;Name=IXO1088_010985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010985 CP040687.1 Protein Homology CDS 2266187 2267116 . + 0 ID=cds-QIE15757.1;Parent=gene-IXO1088_010985;Dbxref=NCBI_GP:QIE15757.1;Name=QIE15757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444637.1;locus_tag=IXO1088_010985;product=DUF4123 domain-containing protein;protein_id=QIE15757.1;transl_table=11 CP040687.1 Genbank pseudogene 2267113 2269437 . + . ID=gene-IXO1088_010990;Name=IXO1088_010990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_010990;pseudo=true CP040687.1 Protein Homology CDS 2267113 2269437 . + 0 ID=cds-IXO1088_010990;Parent=gene-IXO1088_010990;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444638.1;locus_tag=IXO1088_010990;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2269446 2270402 . - . ID=gene-IXO1088_010995;Name=IXO1088_010995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_010995 CP040687.1 Protein Homology CDS 2269446 2270402 . - 0 ID=cds-QIE15758.1;Parent=gene-IXO1088_010995;Dbxref=NCBI_GP:QIE15758.1;Name=QIE15758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=IXO1088_010995;product=IS30-like element IS1112a family transposase;protein_id=QIE15758.1;transl_table=11 CP040687.1 Genbank gene 2270686 2272005 . + . ID=gene-IXO1088_011000;Name=IXO1088_011000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011000 CP040687.1 Protein Homology CDS 2270686 2272005 . + 0 ID=cds-QIE15759.1;Parent=gene-IXO1088_011000;Dbxref=NCBI_GP:QIE15759.1;Name=QIE15759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_011000;product=IS701 family transposase;protein_id=QIE15759.1;transl_table=11 CP040687.1 Genbank gene 2272218 2273186 . - . ID=gene-IXO1088_011005;Name=IXO1088_011005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011005 CP040687.1 Protein Homology CDS 2272218 2273186 . - 0 ID=cds-QIE15760.1;Parent=gene-IXO1088_011005;Dbxref=NCBI_GP:QIE15760.1;Name=QIE15760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_011005;product=IS5-like element ISXo1 family transposase;protein_id=QIE15760.1;transl_table=11 CP040687.1 Genbank pseudogene 2273252 2274064 . - . ID=gene-IXO1088_011010;Name=IXO1088_011010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011010;pseudo=true CP040687.1 Protein Homology CDS 2273252 2274064 . - 0 ID=cds-IXO1088_011010;Parent=gene-IXO1088_011010;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1088_011010;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2274181 2274963 . + . ID=gene-IXO1088_011015;Name=IXO1088_011015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011015;pseudo=true CP040687.1 Protein Homology CDS 2274181 2274963 . + 0 ID=cds-IXO1088_011015;Parent=gene-IXO1088_011015;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637737.1;locus_tag=IXO1088_011015;product=phosphoesterase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2275354 2276061 . + . ID=gene-IXO1088_011020;Name=IXO1088_011020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011020 CP040687.1 Protein Homology CDS 2275354 2276061 . + 0 ID=cds-QIE17957.1;Parent=gene-IXO1088_011020;Dbxref=NCBI_GP:QIE17957.1;Name=QIE17957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637736.2;locus_tag=IXO1088_011020;product=hypothetical protein;protein_id=QIE17957.1;transl_table=11 CP040687.1 Genbank gene 2276132 2276446 . + . ID=gene-IXO1088_011025;Name=IXO1088_011025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011025 CP040687.1 Protein Homology CDS 2276132 2276446 . + 0 ID=cds-QIE15761.1;Parent=gene-IXO1088_011025;Dbxref=NCBI_GP:QIE15761.1;Name=QIE15761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408639.1;locus_tag=IXO1088_011025;product=hypothetical protein;protein_id=QIE15761.1;transl_table=11 CP040687.1 Genbank gene 2276406 2277902 . - . ID=gene-IXO1088_011030;Name=IXO1088_011030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011030 CP040687.1 Protein Homology CDS 2276406 2277902 . - 0 ID=cds-QIE15762.1;Parent=gene-IXO1088_011030;Dbxref=NCBI_GP:QIE15762.1;Name=QIE15762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637735.1;locus_tag=IXO1088_011030;product=aminotransferase class III-fold pyridoxal phosphate-dependent enzyme;protein_id=QIE15762.1;transl_table=11 CP040687.1 Genbank gene 2278026 2278457 . + . ID=gene-IXO1088_011035;Name=IXO1088_011035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011035 CP040687.1 Protein Homology CDS 2278026 2278457 . + 0 ID=cds-QIE15763.1;Parent=gene-IXO1088_011035;Dbxref=NCBI_GP:QIE15763.1;Name=QIE15763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489775.1;locus_tag=IXO1088_011035;product=Lrp/AsnC family transcriptional regulator;protein_id=QIE15763.1;transl_table=11 CP040687.1 Genbank gene 2278637 2279707 . + . ID=gene-IXO1088_011040;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=IXO1088_011040 CP040687.1 Protein Homology CDS 2278637 2279707 . + 0 ID=cds-QIE17958.1;Parent=gene-IXO1088_011040;Dbxref=NCBI_GP:QIE17958.1;Name=QIE17958.1;gbkey=CDS;gene=queA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637733.1;locus_tag=IXO1088_011040;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=QIE17958.1;transl_table=11 CP040687.1 Genbank gene 2279777 2280922 . + . ID=gene-IXO1088_011045;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=IXO1088_011045 CP040687.1 Protein Homology CDS 2279777 2280922 . + 0 ID=cds-QIE15764.1;Parent=gene-IXO1088_011045;Dbxref=NCBI_GP:QIE15764.1;Name=QIE15764.1;gbkey=CDS;gene=tgt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637732.1;locus_tag=IXO1088_011045;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=QIE15764.1;transl_table=11 CP040687.1 Genbank gene 2281054 2281407 . + . ID=gene-IXO1088_011050;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=IXO1088_011050 CP040687.1 Protein Homology CDS 2281054 2281407 . + 0 ID=cds-QIE15765.1;Parent=gene-IXO1088_011050;Dbxref=NCBI_GP:QIE15765.1;Name=QIE15765.1;gbkey=CDS;gene=yajC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637731.1;locus_tag=IXO1088_011050;product=preprotein translocase subunit YajC;protein_id=QIE15765.1;transl_table=11 CP040687.1 Genbank gene 2281604 2283448 . + . ID=gene-IXO1088_011055;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=IXO1088_011055 CP040687.1 Protein Homology CDS 2281604 2283448 . + 0 ID=cds-QIE15766.1;Parent=gene-IXO1088_011055;Dbxref=NCBI_GP:QIE15766.1;Name=QIE15766.1;gbkey=CDS;gene=secD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917104.1;locus_tag=IXO1088_011055;product=protein translocase subunit SecD;protein_id=QIE15766.1;transl_table=11 CP040687.1 Genbank gene 2283543 2284511 . + . ID=gene-IXO1088_011060;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=IXO1088_011060 CP040687.1 Protein Homology CDS 2283543 2284511 . + 0 ID=cds-QIE15767.1;Parent=gene-IXO1088_011060;Dbxref=NCBI_GP:QIE15767.1;Name=QIE15767.1;gbkey=CDS;gene=secF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637729.1;locus_tag=IXO1088_011060;product=protein translocase subunit SecF;protein_id=QIE15767.1;transl_table=11 CP040687.1 Genbank gene 2284592 2284954 . - . ID=gene-IXO1088_011065;Name=IXO1088_011065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011065 CP040687.1 Protein Homology CDS 2284592 2284954 . - 0 ID=cds-QIE15768.1;Parent=gene-IXO1088_011065;Dbxref=NCBI_GP:QIE15768.1;Name=QIE15768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408636.1;locus_tag=IXO1088_011065;product=recombinase;protein_id=QIE15768.1;transl_table=11 CP040687.1 Genbank pseudogene 2285162 2286145 . + . ID=gene-IXO1088_011070;Name=IXO1088_011070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011070;pseudo=true CP040687.1 Protein Homology CDS 2285162 2286145 . + 0 ID=cds-IXO1088_011070;Parent=gene-IXO1088_011070;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=IXO1088_011070;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2286394 2287360 . + . ID=gene-IXO1088_011075;Name=IXO1088_011075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011075;pseudo=true CP040687.1 Protein Homology CDS 2286394 2287360 . + 0 ID=cds-IXO1088_011075;Parent=gene-IXO1088_011075;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011805842.1;locus_tag=IXO1088_011075;product=IS481 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2287360 2287542 . + . ID=gene-IXO1088_011080;Name=IXO1088_011080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011080;pseudo=true CP040687.1 Protein Homology CDS 2287360 2287542 . + 0 ID=cds-IXO1088_011080;Parent=gene-IXO1088_011080;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1088_011080;product=IS4 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2287573 2288961 . - . ID=gene-IXO1088_011085;Name=IXO1088_011085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011085 CP040687.1 Protein Homology CDS 2287573 2288961 . - 0 ID=cds-QIE15769.1;Parent=gene-IXO1088_011085;Dbxref=NCBI_GP:QIE15769.1;Name=QIE15769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409690.1;locus_tag=IXO1088_011085;product=IS701 family transposase;protein_id=QIE15769.1;transl_table=11 CP040687.1 Genbank gene 2289211 2290395 . - . ID=gene-IXO1088_011090;Name=IXO1088_011090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011090 CP040687.1 Protein Homology CDS 2289211 2290395 . - 0 ID=cds-QIE17959.1;Parent=gene-IXO1088_011090;Dbxref=NCBI_GP:QIE17959.1;Name=QIE17959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557964.1;locus_tag=IXO1088_011090;product=IS256 family transposase;protein_id=QIE17959.1;transl_table=11 CP040687.1 Genbank gene 2290446 2291507 . + . ID=gene-IXO1088_011095;Name=IXO1088_011095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011095 CP040687.1 Protein Homology CDS 2290446 2291507 . + 0 ID=cds-QIE15770.1;Parent=gene-IXO1088_011095;Dbxref=NCBI_GP:QIE15770.1;Name=QIE15770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029868.1;locus_tag=IXO1088_011095;product=IS5 family transposase;protein_id=QIE15770.1;transl_table=11 CP040687.1 Genbank gene 2291744 2293063 . - . ID=gene-IXO1088_011100;Name=IXO1088_011100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011100 CP040687.1 Protein Homology CDS 2291744 2293063 . - 0 ID=cds-QIE15771.1;Parent=gene-IXO1088_011100;Dbxref=NCBI_GP:QIE15771.1;Name=QIE15771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_011100;product=IS701 family transposase;protein_id=QIE15771.1;transl_table=11 CP040687.1 Genbank gene 2293134 2293775 . - . ID=gene-IXO1088_011105;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=IXO1088_011105 CP040687.1 Protein Homology CDS 2293134 2293775 . - 0 ID=cds-QIE15772.1;Parent=gene-IXO1088_011105;Dbxref=NCBI_GP:QIE15772.1;Name=QIE15772.1;gbkey=CDS;gene=rnt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572178.1;locus_tag=IXO1088_011105;product=ribonuclease T;protein_id=QIE15772.1;transl_table=11 CP040687.1 Genbank gene 2294053 2294448 . - . ID=gene-IXO1088_011110;Name=IXO1088_011110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011110 CP040687.1 Protein Homology CDS 2294053 2294448 . - 0 ID=cds-QIE15773.1;Parent=gene-IXO1088_011110;Dbxref=NCBI_GP:QIE15773.1;Name=QIE15773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380148.1;locus_tag=IXO1088_011110;product=RcnB family protein;protein_id=QIE15773.1;transl_table=11 CP040687.1 Genbank gene 2294581 2295291 . - . ID=gene-IXO1088_011115;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=IXO1088_011115 CP040687.1 Protein Homology CDS 2294581 2295291 . - 0 ID=cds-QIE15774.1;Parent=gene-IXO1088_011115;Dbxref=NCBI_GP:QIE15774.1;Name=QIE15774.1;gbkey=CDS;gene=phoU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636894.1;locus_tag=IXO1088_011115;product=phosphate signaling complex protein PhoU;protein_id=QIE15774.1;transl_table=11 CP040687.1 Genbank gene 2295420 2296250 . - . ID=gene-IXO1088_011120;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=IXO1088_011120 CP040687.1 Protein Homology CDS 2295420 2296250 . - 0 ID=cds-QIE15775.1;Parent=gene-IXO1088_011120;Dbxref=NCBI_GP:QIE15775.1;Name=QIE15775.1;gbkey=CDS;gene=pstB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636895.2;locus_tag=IXO1088_011120;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=QIE15775.1;transl_table=11 CP040687.1 Genbank gene 2296273 2297142 . - . ID=gene-IXO1088_011125;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=IXO1088_011125 CP040687.1 Protein Homology CDS 2296273 2297142 . - 0 ID=cds-QIE15776.1;Parent=gene-IXO1088_011125;Dbxref=NCBI_GP:QIE15776.1;Name=QIE15776.1;gbkey=CDS;gene=pstA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155848.1;locus_tag=IXO1088_011125;product=phosphate ABC transporter permease PstA;protein_id=QIE15776.1;transl_table=11 CP040687.1 Genbank gene 2297142 2298116 . - . ID=gene-IXO1088_011130;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=IXO1088_011130 CP040687.1 Protein Homology CDS 2297142 2298116 . - 0 ID=cds-QIE15777.1;Parent=gene-IXO1088_011130;Dbxref=NCBI_GP:QIE15777.1;Name=QIE15777.1;gbkey=CDS;gene=pstC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636897.1;locus_tag=IXO1088_011130;product=phosphate ABC transporter permease subunit PstC;protein_id=QIE15777.1;transl_table=11 CP040687.1 Genbank gene 2298229 2299320 . - . ID=gene-IXO1088_011135;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=IXO1088_011135 CP040687.1 Protein Homology CDS 2298229 2299320 . - 0 ID=cds-QIE15778.1;Parent=gene-IXO1088_011135;Dbxref=NCBI_GP:QIE15778.1;Name=QIE15778.1;gbkey=CDS;gene=pstS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636898.1;locus_tag=IXO1088_011135;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=QIE15778.1;transl_table=11 CP040687.1 Genbank gene 2299506 2300579 . - . ID=gene-IXO1088_011140;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=IXO1088_011140 CP040687.1 Protein Homology CDS 2299506 2300579 . - 0 ID=cds-QIE17960.1;Parent=gene-IXO1088_011140;Dbxref=NCBI_GP:QIE17960.1;Name=QIE17960.1;gbkey=CDS;gene=pstS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636899.1;locus_tag=IXO1088_011140;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=QIE17960.1;transl_table=11 CP040687.1 Genbank gene 2300714 2301964 . - . ID=gene-IXO1088_011145;Name=IXO1088_011145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011145 CP040687.1 Protein Homology CDS 2300714 2301964 . - 0 ID=cds-QIE15779.1;Parent=gene-IXO1088_011145;Dbxref=NCBI_GP:QIE15779.1;Name=QIE15779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636900.1;locus_tag=IXO1088_011145;product=porin;protein_id=QIE15779.1;transl_table=11 CP040687.1 Genbank pseudogene 2302304 2302624 . + . ID=gene-IXO1088_011150;Name=IXO1088_011150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011150;pseudo=true CP040687.1 Protein Homology CDS 2302304 2302624 . + 0 ID=cds-IXO1088_011150;Parent=gene-IXO1088_011150;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155852.1;locus_tag=IXO1088_011150;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2302798 2303561 . + . ID=gene-IXO1088_011155;Name=IXO1088_011155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011155 CP040687.1 Protein Homology CDS 2302798 2303113 . + 0 ID=cds-QIE15780.1;Parent=gene-IXO1088_011155;Dbxref=NCBI_GP:QIE15780.1;Name=QIE15780.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_011155;product=IS5 family transposase;protein_id=QIE15780.1;transl_table=11 CP040687.1 Protein Homology CDS 2303113 2303561 . + 2 ID=cds-QIE15780.1;Parent=gene-IXO1088_011155;Dbxref=NCBI_GP:QIE15780.1;Name=QIE15780.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_011155;product=IS5 family transposase;protein_id=QIE15780.1;transl_table=11 CP040687.1 Genbank gene 2303688 2304236 . + . ID=gene-IXO1088_011160;Name=IXO1088_011160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011160 CP040687.1 Protein Homology CDS 2303688 2304236 . + 0 ID=cds-QIE15781.1;Parent=gene-IXO1088_011160;Dbxref=NCBI_GP:QIE15781.1;Name=QIE15781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408621.1;locus_tag=IXO1088_011160;product=carbonic anhydrase;protein_id=QIE15781.1;transl_table=11 CP040687.1 Genbank pseudogene 2304248 2305344 . + . ID=gene-IXO1088_011165;Name=IXO1088_011165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011165;pseudo=true CP040687.1 Protein Homology CDS 2304248 2305344 . + 0 ID=cds-IXO1088_011165;Parent=gene-IXO1088_011165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162797.1;locus_tag=IXO1088_011165;product=SulP family inorganic anion transporter;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2305547 2306257 . - . ID=gene-IXO1088_011170;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=IXO1088_011170 CP040687.1 Protein Homology CDS 2305547 2306257 . - 0 ID=cds-QIE15782.1;Parent=gene-IXO1088_011170;Dbxref=NCBI_GP:QIE15782.1;Name=QIE15782.1;gbkey=CDS;gene=nth;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502811.1;locus_tag=IXO1088_011170;product=endonuclease III;protein_id=QIE15782.1;transl_table=11 CP040687.1 Genbank gene 2306254 2306634 . - . ID=gene-IXO1088_011175;Name=IXO1088_011175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011175 CP040687.1 Protein Homology CDS 2306254 2306634 . - 0 ID=cds-QIE15783.1;Parent=gene-IXO1088_011175;Dbxref=NCBI_GP:QIE15783.1;Name=QIE15783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502812.1;locus_tag=IXO1088_011175;product=hypothetical protein;protein_id=QIE15783.1;transl_table=11 CP040687.1 Genbank gene 2306643 2307425 . - . ID=gene-IXO1088_011180;Name=IXO1088_011180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011180 CP040687.1 Protein Homology CDS 2306643 2307425 . - 0 ID=cds-QIE15784.1;Parent=gene-IXO1088_011180;Dbxref=NCBI_GP:QIE15784.1;Name=QIE15784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636905.1;locus_tag=IXO1088_011180;product=enoyl-CoA hydratase;protein_id=QIE15784.1;transl_table=11 CP040687.1 Genbank gene 2307589 2308287 . + . ID=gene-IXO1088_011185;Name=IXO1088_011185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011185 CP040687.1 Protein Homology CDS 2307589 2308287 . + 0 ID=cds-QIE15785.1;Parent=gene-IXO1088_011185;Dbxref=NCBI_GP:QIE15785.1;Name=QIE15785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636906.1;locus_tag=IXO1088_011185;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=QIE15785.1;transl_table=11 CP040687.1 Genbank gene 2308472 2309239 . + . ID=gene-IXO1088_011190;Name=IXO1088_011190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011190 CP040687.1 Protein Homology CDS 2308472 2309239 . + 0 ID=cds-QIE17961.1;Parent=gene-IXO1088_011190;Dbxref=NCBI_GP:QIE17961.1;Name=QIE17961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804448.1;locus_tag=IXO1088_011190;product=CoA pyrophosphatase;protein_id=QIE17961.1;transl_table=11 CP040687.1 Genbank gene 2309236 2310108 . + . ID=gene-IXO1088_011195;Name=IXO1088_011195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011195 CP040687.1 Protein Homology CDS 2309236 2310108 . + 0 ID=cds-QIE15786.1;Parent=gene-IXO1088_011195;Dbxref=NCBI_GP:QIE15786.1;Name=QIE15786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636908.1;locus_tag=IXO1088_011195;product=sulfurtransferase;protein_id=QIE15786.1;transl_table=11 CP040687.1 Genbank gene 2310197 2311150 . + . ID=gene-IXO1088_011200;Name=IXO1088_011200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011200 CP040687.1 Protein Homology CDS 2310197 2311150 . + 0 ID=cds-QIE15787.1;Parent=gene-IXO1088_011200;Dbxref=NCBI_GP:QIE15787.1;Name=QIE15787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004429239.1;locus_tag=IXO1088_011200;product=DUF1684 domain-containing protein;protein_id=QIE15787.1;transl_table=11 CP040687.1 Genbank gene 2311227 2311802 . - . ID=gene-IXO1088_011205;Name=IXO1088_011205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011205 CP040687.1 Protein Homology CDS 2311227 2311802 . - 0 ID=cds-QIE15788.1;Parent=gene-IXO1088_011205;Dbxref=NCBI_GP:QIE15788.1;Name=QIE15788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302791.1;locus_tag=IXO1088_011205;product=N-acetylmuramoyl-L-alanine amidase;protein_id=QIE15788.1;transl_table=11 CP040687.1 Genbank gene 2311826 2312317 . + . ID=gene-IXO1088_011210;Name=IXO1088_011210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011210 CP040687.1 Protein Homology CDS 2311826 2312317 . + 0 ID=cds-QIE15789.1;Parent=gene-IXO1088_011210;Dbxref=NCBI_GP:QIE15789.1;Name=QIE15789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636911.1;locus_tag=IXO1088_011210;product=MOSC domain-containing protein;protein_id=QIE15789.1;transl_table=11 CP040687.1 Genbank gene 2312314 2312841 . + . ID=gene-IXO1088_011215;Name=IXO1088_011215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011215 CP040687.1 Protein Homology CDS 2312314 2312841 . + 0 ID=cds-QIE15790.1;Parent=gene-IXO1088_011215;Dbxref=NCBI_GP:QIE15790.1;Name=QIE15790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636912.1;locus_tag=IXO1088_011215;product=alpha/beta hydrolase;protein_id=QIE15790.1;transl_table=11 CP040687.1 Genbank gene 2312882 2313388 . + . ID=gene-IXO1088_011220;Name=IXO1088_011220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011220 CP040687.1 Protein Homology CDS 2312882 2313388 . + 0 ID=cds-QIE15791.1;Parent=gene-IXO1088_011220;Dbxref=NCBI_GP:QIE15791.1;Name=QIE15791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636913.1;locus_tag=IXO1088_011220;product=N-acetyltransferase;protein_id=QIE15791.1;transl_table=11 CP040687.1 Genbank pseudogene 2313574 2315183 . + . ID=gene-IXO1088_011225;Name=IXO1088_011225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011225;pseudo=true CP040687.1 Protein Homology CDS 2313574 2315183 . + 0 ID=cds-IXO1088_011225;Parent=gene-IXO1088_011225;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160314.1;locus_tag=IXO1088_011225;product=ABC-F family ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2315162 2315353 . + . ID=gene-IXO1088_011230;Name=IXO1088_011230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011230 CP040687.1 Protein Homology CDS 2315162 2315353 . + 0 ID=cds-QIE15792.1;Parent=gene-IXO1088_011230;Dbxref=NCBI_GP:QIE15792.1;Name=QIE15792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155866.1;locus_tag=IXO1088_011230;product=hypothetical protein;protein_id=QIE15792.1;transl_table=11 CP040687.1 Genbank gene 2315350 2317485 . + . ID=gene-IXO1088_011235;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=IXO1088_011235 CP040687.1 Protein Homology CDS 2315350 2317485 . + 0 ID=cds-QIE15793.1;Parent=gene-IXO1088_011235;Dbxref=NCBI_GP:QIE15793.1;Name=QIE15793.1;gbkey=CDS;gene=rlmKL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636916.2;locus_tag=IXO1088_011235;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=QIE15793.1;transl_table=11 CP040687.1 Genbank gene 2317695 2317771 . + . ID=gene-IXO1088_011240;Name=IXO1088_011240;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_011240 CP040687.1 cmsearch ncRNA 2317695 2317771 . + . ID=rna-IXO1088_011240;Parent=gene-IXO1088_011240;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_011240;product=sX9 sRNA CP040687.1 cmsearch exon 2317695 2317771 . + . ID=exon-IXO1088_011240-1;Parent=rna-IXO1088_011240;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_011240;product=sX9 sRNA CP040687.1 Genbank gene 2317969 2318745 . + . ID=gene-IXO1088_011245;Name=IXO1088_011245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011245 CP040687.1 Protein Homology CDS 2317969 2318745 . + 0 ID=cds-QIE15794.1;Parent=gene-IXO1088_011245;Dbxref=NCBI_GP:QIE15794.1;Name=QIE15794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636917.1;locus_tag=IXO1088_011245;product=NAD(+) kinase;protein_id=QIE15794.1;transl_table=11 CP040687.1 Genbank gene 2318913 2319869 . + . ID=gene-IXO1088_011250;Name=IXO1088_011250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011250 CP040687.1 Protein Homology CDS 2318913 2319869 . + 0 ID=cds-QIE15795.1;Parent=gene-IXO1088_011250;Dbxref=NCBI_GP:QIE15795.1;Name=QIE15795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366538.1;locus_tag=IXO1088_011250;product=5'-nucleotidase;protein_id=QIE15795.1;transl_table=11 CP040687.1 Genbank gene 2319890 2320450 . - . ID=gene-IXO1088_011255;Name=IXO1088_011255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011255 CP040687.1 Protein Homology CDS 2319890 2320450 . - 0 ID=cds-QIE15796.1;Parent=gene-IXO1088_011255;Dbxref=NCBI_GP:QIE15796.1;Name=QIE15796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259092.1;locus_tag=IXO1088_011255;product=DUF2939 domain-containing protein;protein_id=QIE15796.1;transl_table=11 CP040687.1 Genbank gene 2320492 2321511 . - . ID=gene-IXO1088_011260;Name=IXO1088_011260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011260 CP040687.1 Protein Homology CDS 2320492 2321511 . - 0 ID=cds-QIE15797.1;Parent=gene-IXO1088_011260;Dbxref=NCBI_GP:QIE15797.1;Name=QIE15797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304892.1;locus_tag=IXO1088_011260;product=aldo/keto reductase;protein_id=QIE15797.1;transl_table=11 CP040687.1 Genbank gene 2321484 2322170 . - . ID=gene-IXO1088_011265;Name=IXO1088_011265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011265 CP040687.1 Protein Homology CDS 2321484 2322170 . - 0 ID=cds-QIE15798.1;Parent=gene-IXO1088_011265;Dbxref=NCBI_GP:QIE15798.1;Name=QIE15798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636921.1;locus_tag=IXO1088_011265;product=DUF2461 domain-containing protein;protein_id=QIE15798.1;transl_table=11 CP040687.1 Genbank gene 2322167 2323612 . - . ID=gene-IXO1088_011270;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=IXO1088_011270 CP040687.1 Protein Homology CDS 2322167 2323612 . - 0 ID=cds-QIE15799.1;Parent=gene-IXO1088_011270;Dbxref=NCBI_GP:QIE15799.1;Name=QIE15799.1;gbkey=CDS;gene=sbcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636922.1;locus_tag=IXO1088_011270;product=exodeoxyribonuclease I;protein_id=QIE15799.1;transl_table=11 CP040687.1 Genbank gene 2323916 2325283 . - . ID=gene-IXO1088_011275;Name=IXO1088_011275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011275 CP040687.1 Protein Homology CDS 2323916 2325283 . - 0 ID=cds-QIE15800.1;Parent=gene-IXO1088_011275;Dbxref=NCBI_GP:QIE15800.1;Name=QIE15800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576314.1;locus_tag=IXO1088_011275;product=FAD-dependent monooxygenase;protein_id=QIE15800.1;transl_table=11 CP040687.1 Genbank gene 2325455 2326726 . - . ID=gene-IXO1088_011280;Name=kynU;gbkey=Gene;gene=kynU;gene_biotype=protein_coding;locus_tag=IXO1088_011280 CP040687.1 Protein Homology CDS 2325455 2326726 . - 0 ID=cds-QIE15801.1;Parent=gene-IXO1088_011280;Dbxref=NCBI_GP:QIE15801.1;Name=QIE15801.1;gbkey=CDS;gene=kynU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636924.2;locus_tag=IXO1088_011280;product=kynureninase;protein_id=QIE15801.1;transl_table=11 CP040687.1 Genbank pseudogene 2326760 2327904 . - . ID=gene-IXO1088_011285;Name=IXO1088_011285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011285;pseudo=true CP040687.1 Protein Homology CDS 2326760 2327904 . - 0 ID=cds-IXO1088_011285;Parent=gene-IXO1088_011285;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163988.1;locus_tag=IXO1088_011285;product=FUSC family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2328267 2328914 . - . ID=gene-IXO1088_011290;Name=IXO1088_011290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011290 CP040687.1 Protein Homology CDS 2328267 2328914 . - 0 ID=cds-QIE15802.1;Parent=gene-IXO1088_011290;Dbxref=NCBI_GP:QIE15802.1;Name=QIE15802.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12805.5;locus_tag=IXO1088_011290;product=hypothetical protein;protein_id=QIE15802.1;transl_table=11 CP040687.1 Genbank gene 2328927 2329457 . - . ID=gene-IXO1088_011295;Name=IXO1088_011295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011295 CP040687.1 Protein Homology CDS 2328927 2329457 . - 0 ID=cds-QIE15803.1;Parent=gene-IXO1088_011295;Dbxref=NCBI_GP:QIE15803.1;Name=QIE15803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155876.1;locus_tag=IXO1088_011295;product=3-hydroxyanthranilate 3%2C4-dioxygenase;protein_id=QIE15803.1;transl_table=11 CP040687.1 Genbank gene 2329546 2330208 . - . ID=gene-IXO1088_011300;Name=IXO1088_011300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011300 CP040687.1 Protein Homology CDS 2329546 2330208 . - 0 ID=cds-QIE15804.1;Parent=gene-IXO1088_011300;Dbxref=NCBI_GP:QIE15804.1;Name=QIE15804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636927.1;locus_tag=IXO1088_011300;product=carbonate dehydratase;protein_id=QIE15804.1;transl_table=11 CP040687.1 Genbank pseudogene 2330294 2330932 . - . ID=gene-IXO1088_011305;Name=IXO1088_011305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011305;pseudo=true CP040687.1 Protein Homology CDS 2330294 2330932 . - 0 ID=cds-IXO1088_011305;Parent=gene-IXO1088_011305;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379580.1;locus_tag=IXO1088_011305;product=FMN-binding negative transcriptional regulator;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2330934 2331260 . - . ID=gene-IXO1088_011310;Name=IXO1088_011310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011310 CP040687.1 Protein Homology CDS 2330934 2331260 . - 0 ID=cds-QIE15805.1;Parent=gene-IXO1088_011310;Dbxref=NCBI_GP:QIE15805.1;Name=QIE15805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966296.1;locus_tag=IXO1088_011310;product=hypothetical protein;protein_id=QIE15805.1;transl_table=11 CP040687.1 Genbank gene 2331257 2331562 . - . ID=gene-IXO1088_011315;Name=IXO1088_011315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011315 CP040687.1 Protein Homology CDS 2331257 2331562 . - 0 ID=cds-QIE15806.1;Parent=gene-IXO1088_011315;Dbxref=NCBI_GP:QIE15806.1;Name=QIE15806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158153.1;locus_tag=IXO1088_011315;product=hypothetical protein;protein_id=QIE15806.1;transl_table=11 CP040687.1 Genbank gene 2331559 2331816 . - . ID=gene-IXO1088_011320;Name=IXO1088_011320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011320 CP040687.1 Protein Homology CDS 2331559 2331816 . - 0 ID=cds-QIE15807.1;Parent=gene-IXO1088_011320;Dbxref=NCBI_GP:QIE15807.1;Name=QIE15807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300679.1;locus_tag=IXO1088_011320;product=hypothetical protein;protein_id=QIE15807.1;transl_table=11 CP040687.1 Genbank gene 2331818 2333212 . - . ID=gene-IXO1088_011325;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=IXO1088_011325 CP040687.1 Protein Homology CDS 2331818 2333212 . - 0 ID=cds-QIE15808.1;Parent=gene-IXO1088_011325;Dbxref=NCBI_GP:QIE15808.1;Name=QIE15808.1;gbkey=CDS;gene=asnS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636932.1;locus_tag=IXO1088_011325;product=asparagine--tRNA ligase;protein_id=QIE15808.1;transl_table=11 CP040687.1 Genbank pseudogene 2333209 2333420 . - . ID=gene-IXO1088_011330;Name=IXO1088_011330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011330;pseudo=true CP040687.1 Protein Homology CDS 2333209 2333420 . - 0 ID=cds-IXO1088_011330;Parent=gene-IXO1088_011330;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366574.1;locus_tag=IXO1088_011330;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2333419 2333757 . + . ID=gene-IXO1088_011335;Name=IXO1088_011335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011335 CP040687.1 Protein Homology CDS 2333419 2333757 . + 0 ID=cds-QIE15809.1;Parent=gene-IXO1088_011335;Dbxref=NCBI_GP:QIE15809.1;Name=QIE15809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966300.1;locus_tag=IXO1088_011335;product=iron-sulfur cluster assembly accessory protein;protein_id=QIE15809.1;transl_table=11 CP040687.1 Genbank gene 2334112 2334543 . + . ID=gene-IXO1088_011340;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=IXO1088_011340 CP040687.1 Protein Homology CDS 2334112 2334543 . + 0 ID=cds-QIE15810.1;Parent=gene-IXO1088_011340;Dbxref=NCBI_GP:QIE15810.1;Name=QIE15810.1;gbkey=CDS;gene=rpsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636934.1;locus_tag=IXO1088_011340;product=30S ribosomal protein S6;protein_id=QIE15810.1;transl_table=11 CP040687.1 Genbank gene 2334555 2334785 . + . ID=gene-IXO1088_011345;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=IXO1088_011345 CP040687.1 Protein Homology CDS 2334555 2334785 . + 0 ID=cds-QIE15811.1;Parent=gene-IXO1088_011345;Dbxref=NCBI_GP:QIE15811.1;Name=QIE15811.1;gbkey=CDS;gene=rpsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804494.1;locus_tag=IXO1088_011345;product=30S ribosomal protein S18;protein_id=QIE15811.1;transl_table=11 CP040687.1 Genbank gene 2335052 2335501 . + . ID=gene-IXO1088_011350;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=IXO1088_011350 CP040687.1 Protein Homology CDS 2335052 2335501 . + 0 ID=cds-QIE15812.1;Parent=gene-IXO1088_011350;Dbxref=NCBI_GP:QIE15812.1;Name=QIE15812.1;gbkey=CDS;gene=rplI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636936.1;locus_tag=IXO1088_011350;product=50S ribosomal protein L9;protein_id=QIE15812.1;transl_table=11 CP040687.1 Genbank gene 2335711 2339214 . + . ID=gene-IXO1088_011355;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=IXO1088_011355 CP040687.1 Protein Homology CDS 2335711 2339214 . + 0 ID=cds-QIE15813.1;Parent=gene-IXO1088_011355;Dbxref=NCBI_GP:QIE15813.1;Name=QIE15813.1;gbkey=CDS;gene=smc;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636938.1;locus_tag=IXO1088_011355;product=chromosome segregation protein SMC;protein_id=QIE15813.1;transl_table=11 CP040687.1 Genbank gene 2339271 2340002 . + . ID=gene-IXO1088_011360;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=IXO1088_011360 CP040687.1 Protein Homology CDS 2339271 2340002 . + 0 ID=cds-QIE15814.1;Parent=gene-IXO1088_011360;Dbxref=NCBI_GP:QIE15814.1;Name=QIE15814.1;gbkey=CDS;gene=zipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636939.1;locus_tag=IXO1088_011360;product=cell division protein ZipA;protein_id=QIE15814.1;transl_table=11 CP040687.1 Genbank pseudogene 2340561 2340788 . - . ID=gene-IXO1088_011365;Name=IXO1088_011365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011365;pseudo=true CP040687.1 Protein Homology CDS 2340561 2340788 . - 0 ID=cds-IXO1088_011365;Parent=gene-IXO1088_011365;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636940.1;locus_tag=IXO1088_011365;product=aminotransferase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2340858 2343383 . + . ID=gene-IXO1088_011370;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=IXO1088_011370 CP040687.1 Protein Homology CDS 2340858 2343383 . + 0 ID=cds-QIE17962.1;Parent=gene-IXO1088_011370;Dbxref=NCBI_GP:QIE17962.1;Name=QIE17962.1;gbkey=CDS;gene=ligA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502845.1;locus_tag=IXO1088_011370;product=NAD-dependent DNA ligase LigA;protein_id=QIE17962.1;transl_table=11 CP040687.1 Genbank gene 2343380 2344342 . + . ID=gene-IXO1088_011375;Name=genX;gbkey=Gene;gene=genX;gene_biotype=protein_coding;locus_tag=IXO1088_011375 CP040687.1 Protein Homology CDS 2343380 2344342 . + 0 ID=cds-QIE15815.1;Parent=gene-IXO1088_011375;Dbxref=NCBI_GP:QIE15815.1;Name=QIE15815.1;gbkey=CDS;gene=genX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158162.1;locus_tag=IXO1088_011375;product=EF-P lysine aminoacylase GenX;protein_id=QIE15815.1;transl_table=11 CP040687.1 Genbank gene 2344452 2345138 . + . ID=gene-IXO1088_011380;Name=IXO1088_011380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011380 CP040687.1 Protein Homology CDS 2344452 2345138 . + 0 ID=cds-QIE15816.1;Parent=gene-IXO1088_011380;Dbxref=NCBI_GP:QIE15816.1;Name=QIE15816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089862.1;locus_tag=IXO1088_011380;product=DUF3011 domain-containing protein;protein_id=QIE15816.1;transl_table=11 CP040687.1 Genbank gene 2345201 2345276 . + . ID=gene-IXO1088_011385;Name=IXO1088_011385;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_011385 CP040687.1 cmsearch ncRNA 2345201 2345276 . + . ID=rna-IXO1088_011385;Parent=gene-IXO1088_011385;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_011385;product=sX9 sRNA CP040687.1 cmsearch exon 2345201 2345276 . + . ID=exon-IXO1088_011385-1;Parent=rna-IXO1088_011385;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_011385;product=sX9 sRNA CP040687.1 Genbank gene 2345339 2346403 . + . ID=gene-IXO1088_011390;Name=mtnA;gbkey=Gene;gene=mtnA;gene_biotype=protein_coding;locus_tag=IXO1088_011390 CP040687.1 Protein Homology CDS 2345339 2346403 . + 0 ID=cds-QIE15817.1;Parent=gene-IXO1088_011390;Dbxref=NCBI_GP:QIE15817.1;Name=QIE15817.1;gbkey=CDS;gene=mtnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636944.1;locus_tag=IXO1088_011390;product=S-methyl-5-thioribose-1-phosphate isomerase;protein_id=QIE15817.1;transl_table=11 CP040687.1 Genbank gene 2346613 2349309 . + . ID=gene-IXO1088_011395;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=IXO1088_011395 CP040687.1 Protein Homology CDS 2346613 2349309 . + 0 ID=cds-QIE15818.1;Parent=gene-IXO1088_011395;Dbxref=NCBI_GP:QIE15818.1;Name=QIE15818.1;gbkey=CDS;gene=gyrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158164.1;locus_tag=IXO1088_011395;product=DNA gyrase subunit A;protein_id=QIE15818.1;transl_table=11 CP040687.1 Genbank pseudogene 2349442 2350223 . + . ID=gene-IXO1088_011400;Name=IXO1088_011400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011400;pseudo=true CP040687.1 Protein Homology CDS 2349442 2350223 . + 0 ID=cds-IXO1088_011400;Parent=gene-IXO1088_011400;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558219.1;locus_tag=IXO1088_011400;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2350345 2351097 . - . ID=gene-IXO1088_011405;Name=IXO1088_011405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011405 CP040687.1 Protein Homology CDS 2350345 2351097 . - 0 ID=cds-QIE15819.1;Parent=gene-IXO1088_011405;Dbxref=NCBI_GP:QIE15819.1;Name=QIE15819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503761.1;locus_tag=IXO1088_011405;product=hypothetical protein;protein_id=QIE15819.1;transl_table=11 CP040687.1 Genbank gene 2351227 2352321 . - . ID=gene-IXO1088_011410;Name=IXO1088_011410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011410 CP040687.1 Protein Homology CDS 2351227 2352321 . - 0 ID=cds-QIE15820.1;Parent=gene-IXO1088_011410;Dbxref=NCBI_GP:QIE15820.1;Name=QIE15820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408590.1;locus_tag=IXO1088_011410;product=acyltransferase;protein_id=QIE15820.1;transl_table=11 CP040687.1 Genbank gene 2352681 2354348 . - . ID=gene-IXO1088_011415;Name=IXO1088_011415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011415 CP040687.1 Protein Homology CDS 2352681 2354348 . - 0 ID=cds-QIE15821.1;Parent=gene-IXO1088_011415;Dbxref=NCBI_GP:QIE15821.1;Name=QIE15821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165198.1;locus_tag=IXO1088_011415;product=urocanate hydratase;protein_id=QIE15821.1;transl_table=11 CP040687.1 Genbank gene 2354365 2355222 . - . ID=gene-IXO1088_011420;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=IXO1088_011420 CP040687.1 Protein Homology CDS 2354365 2355222 . - 0 ID=cds-QIE15822.1;Parent=gene-IXO1088_011420;Dbxref=NCBI_GP:QIE15822.1;Name=QIE15822.1;gbkey=CDS;gene=hutG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485831.1;locus_tag=IXO1088_011420;product=N-formylglutamate deformylase;protein_id=QIE15822.1;transl_table=11 CP040687.1 Genbank gene 2355401 2356942 . - . ID=gene-IXO1088_011425;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=IXO1088_011425 CP040687.1 Protein Homology CDS 2355401 2356942 . - 0 ID=cds-QIE15823.1;Parent=gene-IXO1088_011425;Dbxref=NCBI_GP:QIE15823.1;Name=QIE15823.1;gbkey=CDS;gene=hutH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158168.1;locus_tag=IXO1088_011425;product=histidine ammonia-lyase;protein_id=QIE15823.1;transl_table=11 CP040687.1 Genbank gene 2356956 2358161 . - . ID=gene-IXO1088_011430;Name=IXO1088_011430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011430 CP040687.1 Protein Homology CDS 2356956 2358161 . - 0 ID=cds-QIE15824.1;Parent=gene-IXO1088_011430;Dbxref=NCBI_GP:QIE15824.1;Name=QIE15824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636951.2;locus_tag=IXO1088_011430;product=imidazolonepropionase;protein_id=QIE15824.1;transl_table=11 CP040687.1 Genbank gene 2358222 2359592 . + . ID=gene-IXO1088_011435;Name=IXO1088_011435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011435 CP040687.1 Protein Homology CDS 2358222 2359592 . + 0 ID=cds-QIE15825.1;Parent=gene-IXO1088_011435;Dbxref=NCBI_GP:QIE15825.1;Name=QIE15825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444821.1;locus_tag=IXO1088_011435;product=formimidoylglutamate deiminase;protein_id=QIE15825.1;transl_table=11 CP040687.1 Genbank gene 2359917 2360654 . + . ID=gene-IXO1088_011440;Name=hutC;gbkey=Gene;gene=hutC;gene_biotype=protein_coding;locus_tag=IXO1088_011440 CP040687.1 Protein Homology CDS 2359917 2360654 . + 0 ID=cds-QIE15826.1;Parent=gene-IXO1088_011440;Dbxref=NCBI_GP:QIE15826.1;Name=QIE15826.1;gbkey=CDS;gene=hutC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451099.1;locus_tag=IXO1088_011440;product=histidine utilization repressor;protein_id=QIE15826.1;transl_table=11 CP040687.1 Genbank gene 2360811 2361812 . - . ID=gene-IXO1088_011445;Name=IXO1088_011445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011445 CP040687.1 Protein Homology CDS 2360811 2361812 . - 0 ID=cds-QIE15827.1;Parent=gene-IXO1088_011445;Dbxref=NCBI_GP:QIE15827.1;Name=QIE15827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118989.1;locus_tag=IXO1088_011445;product=restriction endonuclease;protein_id=QIE15827.1;transl_table=11 CP040687.1 Genbank gene 2362379 2362942 . - . ID=gene-IXO1088_011450;Name=IXO1088_011450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011450 CP040687.1 Protein Homology CDS 2362379 2362942 . - 0 ID=cds-QIE15828.1;Parent=gene-IXO1088_011450;Dbxref=NCBI_GP:QIE15828.1;Name=QIE15828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636955.1;locus_tag=IXO1088_011450;product=poly(hydroxyalcanoate) granule associated protein;protein_id=QIE15828.1;transl_table=11 CP040687.1 Genbank gene 2363104 2363379 . - . ID=gene-IXO1088_011455;Name=IXO1088_011455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011455 CP040687.1 Protein Homology CDS 2363104 2363379 . - 0 ID=cds-QIE15829.1;Parent=gene-IXO1088_011455;Dbxref=NCBI_GP:QIE15829.1;Name=QIE15829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636957.1;locus_tag=IXO1088_011455;product=polyhydroxyalkanoic acid synthase;protein_id=QIE15829.1;transl_table=11 CP040687.1 Genbank gene 2363620 2364429 . + . ID=gene-IXO1088_011460;Name=IXO1088_011460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011460 CP040687.1 Protein Homology CDS 2363620 2364429 . + 0 ID=cds-QIE17963.1;Parent=gene-IXO1088_011460;Dbxref=NCBI_GP:QIE17963.1;Name=QIE17963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636956.2;locus_tag=IXO1088_011460;product=FHA domain-containing protein;protein_id=QIE17963.1;transl_table=11 CP040687.1 Genbank gene 2364371 2365027 . - . ID=gene-IXO1088_011465;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=IXO1088_011465 CP040687.1 Protein Homology CDS 2364371 2365027 . - 0 ID=cds-QIE15830.1;Parent=gene-IXO1088_011465;Dbxref=NCBI_GP:QIE15830.1;Name=QIE15830.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636958.1;locus_tag=IXO1088_011465;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=QIE15830.1;transl_table=11 CP040687.1 Genbank gene 2365037 2365180 . - . ID=gene-IXO1088_011470;Name=IXO1088_011470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011470 CP040687.1 Protein Homology CDS 2365037 2365180 . - 0 ID=cds-QIE15831.1;Parent=gene-IXO1088_011470;Dbxref=NCBI_GP:QIE15831.1;Name=QIE15831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300929.1;locus_tag=IXO1088_011470;product=nitrate reductase formation protein NapD;protein_id=QIE15831.1;transl_table=11 CP040687.1 Genbank gene 2365327 2366295 . - . ID=gene-IXO1088_011475;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=IXO1088_011475 CP040687.1 Protein Homology CDS 2365327 2366295 . - 0 ID=cds-QIE15832.1;Parent=gene-IXO1088_011475;Dbxref=NCBI_GP:QIE15832.1;Name=QIE15832.1;gbkey=CDS;gene=msrP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636959.1;locus_tag=IXO1088_011475;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=QIE15832.1;transl_table=11 CP040687.1 Genbank gene 2366470 2367555 . + . ID=gene-IXO1088_011480;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=IXO1088_011480 CP040687.1 Protein Homology CDS 2366470 2367555 . + 0 ID=cds-QIE15833.1;Parent=gene-IXO1088_011480;Dbxref=NCBI_GP:QIE15833.1;Name=QIE15833.1;gbkey=CDS;gene=serC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636960.1;locus_tag=IXO1088_011480;product=phosphoserine transaminase;protein_id=QIE15833.1;transl_table=11 CP040687.1 Genbank gene 2367604 2368812 . + . ID=gene-IXO1088_011485;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=IXO1088_011485 CP040687.1 Protein Homology CDS 2367604 2368812 . + 0 ID=cds-QIE15834.1;Parent=gene-IXO1088_011485;Dbxref=NCBI_GP:QIE15834.1;Name=QIE15834.1;gbkey=CDS;gene=pheA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300926.1;locus_tag=IXO1088_011485;product=prephenate dehydratase;protein_id=QIE15834.1;transl_table=11 CP040687.1 Genbank gene 2368934 2370256 . + . ID=gene-IXO1088_011490;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=IXO1088_011490 CP040687.1 Protein Homology CDS 2368934 2370256 . + 0 ID=cds-QIE15835.1;Parent=gene-IXO1088_011490;Dbxref=NCBI_GP:QIE15835.1;Name=QIE15835.1;gbkey=CDS;gene=aroA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259050.1;locus_tag=IXO1088_011490;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=QIE15835.1;transl_table=11 CP040687.1 Genbank pseudogene 2370280 2370894 . - . ID=gene-IXO1088_011495;Name=IXO1088_011495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011495;pseudo=true CP040687.1 Protein Homology CDS 2370280 2370894 . - 0 ID=cds-IXO1088_011495;Parent=gene-IXO1088_011495;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=IXO1088_011495;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2370898 2371232 . - . ID=gene-IXO1088_011500;Name=IXO1088_011500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011500;pseudo=true CP040687.1 Protein Homology CDS 2370898 2371232 . - 0 ID=cds-IXO1088_011500;Parent=gene-IXO1088_011500;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=IXO1088_011500;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2371302 2371409 . - . ID=gene-IXO1088_011505;Name=IXO1088_011505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011505;pseudo=true CP040687.1 Protein Homology CDS 2371302 2371409 . - 0 ID=cds-IXO1088_011505;Parent=gene-IXO1088_011505;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259790.1;locus_tag=IXO1088_011505;product=IS1595 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2371521 2372534 . - . ID=gene-IXO1088_011510;Name=IXO1088_011510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011510 CP040687.1 Protein Homology CDS 2371521 2372534 . - 0 ID=cds-QIE15836.1;Parent=gene-IXO1088_011510;Dbxref=NCBI_GP:QIE15836.1;Name=QIE15836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638930.1;locus_tag=IXO1088_011510;product=hypothetical protein;protein_id=QIE15836.1;transl_table=11 CP040687.1 Genbank gene 2373136 2381271 . + . ID=gene-IXO1088_011515;Name=IXO1088_011515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011515 CP040687.1 Protein Homology CDS 2373136 2381271 . + 0 ID=cds-QIE15837.1;Parent=gene-IXO1088_011515;Dbxref=NCBI_GP:QIE15837.1;Name=QIE15837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444829.1;locus_tag=IXO1088_011515;product=hypothetical protein;protein_id=QIE15837.1;transl_table=11 CP040687.1 Genbank gene 2381548 2382159 . - . ID=gene-IXO1088_011520;Name=IXO1088_011520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011520 CP040687.1 Protein Homology CDS 2381548 2382159 . - 0 ID=cds-QIE15838.1;Parent=gene-IXO1088_011520;Dbxref=NCBI_GP:QIE15838.1;Name=QIE15838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916054.1;locus_tag=IXO1088_011520;product=response regulator transcription factor;protein_id=QIE15838.1;transl_table=11 CP040687.1 Genbank gene 2382156 2383178 . - . ID=gene-IXO1088_011525;Name=IXO1088_011525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011525 CP040687.1 Protein Homology CDS 2382156 2383178 . - 0 ID=cds-QIE17964.1;Parent=gene-IXO1088_011525;Dbxref=NCBI_GP:QIE17964.1;Name=QIE17964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159768.1;locus_tag=IXO1088_011525;product=HAMP domain-containing histidine kinase;protein_id=QIE17964.1;transl_table=11 CP040687.1 Genbank gene 2383297 2384781 . - . ID=gene-IXO1088_011530;Name=IXO1088_011530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011530 CP040687.1 Protein Homology CDS 2383297 2384781 . - 0 ID=cds-QIE15839.1;Parent=gene-IXO1088_011530;Dbxref=NCBI_GP:QIE15839.1;Name=QIE15839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159769.1;locus_tag=IXO1088_011530;product=efflux transporter outer membrane subunit;protein_id=QIE15839.1;transl_table=11 CP040687.1 Genbank gene 2384778 2387870 . - . ID=gene-IXO1088_011535;Name=IXO1088_011535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011535 CP040687.1 Protein Homology CDS 2384778 2387870 . - 0 ID=cds-QIE15840.1;Parent=gene-IXO1088_011535;Dbxref=NCBI_GP:QIE15840.1;Name=QIE15840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571964.1;locus_tag=IXO1088_011535;product=efflux RND transporter permease subunit;protein_id=QIE15840.1;transl_table=11 CP040687.1 Genbank gene 2387863 2388978 . - . ID=gene-IXO1088_011540;Name=IXO1088_011540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011540 CP040687.1 Protein Homology CDS 2387863 2388978 . - 0 ID=cds-QIE15841.1;Parent=gene-IXO1088_011540;Dbxref=NCBI_GP:QIE15841.1;Name=QIE15841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373460.1;locus_tag=IXO1088_011540;product=efflux RND transporter periplasmic adaptor subunit;protein_id=QIE15841.1;transl_table=11 CP040687.1 Genbank pseudogene 2389111 2389511 . + . ID=gene-IXO1088_011545;Name=IXO1088_011545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011545;pseudo=true CP040687.1 Protein Homology CDS 2389111 2389511 . + 0 ID=cds-IXO1088_011545;Parent=gene-IXO1088_011545;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005933123.1;locus_tag=IXO1088_011545;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2389477 2392212 . - . ID=gene-IXO1088_011550;Name=IXO1088_011550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011550 CP040687.1 Protein Homology CDS 2389477 2392212 . - 0 ID=cds-QIE15842.1;Parent=gene-IXO1088_011550;Dbxref=NCBI_GP:QIE15842.1;Name=QIE15842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160179.1;locus_tag=IXO1088_011550;product=autotransporter domain-containing protein;protein_id=QIE15842.1;transl_table=11 CP040687.1 Genbank gene 2393044 2394420 . + . ID=gene-IXO1088_011555;Name=IXO1088_011555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011555 CP040687.1 Protein Homology CDS 2393044 2394420 . + 0 ID=cds-QIE17965.1;Parent=gene-IXO1088_011555;Dbxref=NCBI_GP:QIE17965.1;Name=QIE17965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=IXO1088_011555;product=IS5 family transposase;protein_id=QIE17965.1;transl_table=11 CP040687.1 Genbank pseudogene 2394460 2394998 . - . ID=gene-IXO1088_011560;Name=IXO1088_011560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011560;pseudo=true CP040687.1 Protein Homology CDS 2394460 2394998 . - 0 ID=cds-IXO1088_011560;Parent=gene-IXO1088_011560;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612183.1;locus_tag=IXO1088_011560;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2394967 2395146 . + . ID=gene-IXO1088_011565;Name=IXO1088_011565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011565 CP040687.1 Protein Homology CDS 2394967 2395146 . + 0 ID=cds-QIE15843.1;Parent=gene-IXO1088_011565;Dbxref=NCBI_GP:QIE15843.1;Name=QIE15843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445198.1;locus_tag=IXO1088_011565;product=hypothetical protein;protein_id=QIE15843.1;transl_table=11 CP040687.1 Genbank pseudogene 2395165 2396656 . + . ID=gene-IXO1088_011570;Name=IXO1088_011570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011570;pseudo=true CP040687.1 Protein Homology CDS 2395165 2396656 . + 0 ID=cds-IXO1088_011570;Parent=gene-IXO1088_011570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1088_011570;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2396981 2398165 . + . ID=gene-IXO1088_011575;Name=IXO1088_011575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011575 CP040687.1 Protein Homology CDS 2396981 2398165 . + 0 ID=cds-QIE15844.1;Parent=gene-IXO1088_011575;Dbxref=NCBI_GP:QIE15844.1;Name=QIE15844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408569.1;locus_tag=IXO1088_011575;product=AMIN domain-containing protein;protein_id=QIE15844.1;transl_table=11 CP040687.1 Genbank gene 2398203 2399123 . + . ID=gene-IXO1088_011580;Name=IXO1088_011580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011580 CP040687.1 Protein Homology CDS 2398203 2399123 . + 0 ID=cds-QIE15845.1;Parent=gene-IXO1088_011580;Dbxref=NCBI_GP:QIE15845.1;Name=QIE15845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408568.1;locus_tag=IXO1088_011580;product=GTP cyclohydrolase I FolE2;protein_id=QIE15845.1;transl_table=11 CP040687.1 Genbank gene 2399617 2399691 . - . ID=gene-IXO1088_011585;Name=IXO1088_011585;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_011585 CP040687.1 tRNAscan-SE tRNA 2399617 2399691 . - . ID=rna-IXO1088_011585;Parent=gene-IXO1088_011585;anticodon=(pos:complement(2399656..2399658));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_011585;product=tRNA-Glu CP040687.1 tRNAscan-SE exon 2399617 2399691 . - . ID=exon-IXO1088_011585-1;Parent=rna-IXO1088_011585;anticodon=(pos:complement(2399656..2399658));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_011585;product=tRNA-Glu CP040687.1 Genbank gene 2399739 2401106 . + . ID=gene-IXO1088_011590;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=IXO1088_011590 CP040687.1 Protein Homology CDS 2399739 2401106 . + 0 ID=cds-QIE15846.1;Parent=gene-IXO1088_011590;Dbxref=NCBI_GP:QIE15846.1;Name=QIE15846.1;gbkey=CDS;gene=pcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637132.1;locus_tag=IXO1088_011590;product=polynucleotide adenylyltransferase PcnB;protein_id=QIE15846.1;transl_table=11 CP040687.1 Genbank gene 2401110 2401595 . + . ID=gene-IXO1088_011595;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=IXO1088_011595 CP040687.1 Protein Homology CDS 2401110 2401595 . + 0 ID=cds-QIE15847.1;Parent=gene-IXO1088_011595;Dbxref=NCBI_GP:QIE15847.1;Name=QIE15847.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637133.1;locus_tag=IXO1088_011595;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=QIE15847.1;transl_table=11 CP040687.1 Genbank gene 2401631 2402446 . + . ID=gene-IXO1088_011600;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=IXO1088_011600 CP040687.1 Protein Homology CDS 2401631 2402446 . + 0 ID=cds-QIE15848.1;Parent=gene-IXO1088_011600;Dbxref=NCBI_GP:QIE15848.1;Name=QIE15848.1;gbkey=CDS;gene=panB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637134.1;locus_tag=IXO1088_011600;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=QIE15848.1;transl_table=11 CP040687.1 Genbank gene 2402443 2403285 . + . ID=gene-IXO1088_011605;Name=IXO1088_011605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011605 CP040687.1 Protein Homology CDS 2402443 2403285 . + 0 ID=cds-QIE15849.1;Parent=gene-IXO1088_011605;Dbxref=NCBI_GP:QIE15849.1;Name=QIE15849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637135.1;locus_tag=IXO1088_011605;product=pantoate--beta-alanine ligase;protein_id=QIE15849.1;transl_table=11 CP040687.1 Genbank gene 2403464 2403844 . + . ID=gene-IXO1088_011610;Name=IXO1088_011610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011610 CP040687.1 Protein Homology CDS 2403464 2403844 . + 0 ID=cds-QIE15850.1;Parent=gene-IXO1088_011610;Dbxref=NCBI_GP:QIE15850.1;Name=QIE15850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637136.1;locus_tag=IXO1088_011610;product=aspartate 1-decarboxylase;protein_id=QIE15850.1;transl_table=11 CP040687.1 Genbank gene 2403841 2405355 . + . ID=gene-IXO1088_011615;Name=IXO1088_011615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011615 CP040687.1 Protein Homology CDS 2403841 2405355 . + 0 ID=cds-QIE15851.1;Parent=gene-IXO1088_011615;Dbxref=NCBI_GP:QIE15851.1;Name=QIE15851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637137.1;locus_tag=IXO1088_011615;product=glucose-6-phosphate isomerase;protein_id=QIE15851.1;transl_table=11 CP040687.1 Genbank gene 2405514 2405858 . + . ID=gene-IXO1088_011620;Name=IXO1088_011620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011620 CP040687.1 Protein Homology CDS 2405514 2405858 . + 0 ID=cds-QIE15852.1;Parent=gene-IXO1088_011620;Dbxref=NCBI_GP:QIE15852.1;Name=QIE15852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371400.1;locus_tag=IXO1088_011620;product=type II toxin-antitoxin system prevent-host-death family antitoxin;protein_id=QIE15852.1;transl_table=11 CP040687.1 Genbank pseudogene 2405862 2406484 . + . ID=gene-IXO1088_011625;Name=IXO1088_011625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011625;pseudo=true CP040687.1 Protein Homology CDS 2405862 2406484 . + 0 ID=cds-IXO1088_011625;Parent=gene-IXO1088_011625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408564.1;locus_tag=IXO1088_011625;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2406501 2406683 . + . ID=gene-IXO1088_011630;Name=IXO1088_011630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011630;pseudo=true CP040687.1 Protein Homology CDS 2406501 2406683 . + 0 ID=cds-IXO1088_011630;Parent=gene-IXO1088_011630;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051141.1;locus_tag=IXO1088_011630;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2406719 2408674 . - . ID=gene-IXO1088_011635;Name=IXO1088_011635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011635 CP040687.1 Protein Homology CDS 2406719 2408674 . - 0 ID=cds-QIE15853.1;Parent=gene-IXO1088_011635;Dbxref=NCBI_GP:QIE15853.1;Name=QIE15853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300461.1;locus_tag=IXO1088_011635;product=DUF839 domain-containing protein;protein_id=QIE15853.1;transl_table=11 CP040687.1 Genbank gene 2409108 2411720 . + . ID=gene-IXO1088_011640;Name=IXO1088_011640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011640 CP040687.1 Protein Homology CDS 2409108 2411720 . + 0 ID=cds-QIE15854.1;Parent=gene-IXO1088_011640;Dbxref=NCBI_GP:QIE15854.1;Name=QIE15854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637141.2;locus_tag=IXO1088_011640;product=glycoside hydrolase family 3 protein;protein_id=QIE15854.1;transl_table=11 CP040687.1 Genbank gene 2411713 2411970 . - . ID=gene-IXO1088_011645;Name=IXO1088_011645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011645 CP040687.1 Protein Homology CDS 2411713 2411970 . - 0 ID=cds-QIE17966.1;Parent=gene-IXO1088_011645;Dbxref=NCBI_GP:QIE17966.1;Name=QIE17966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371412.1;locus_tag=IXO1088_011645;product=hypothetical protein;protein_id=QIE17966.1;transl_table=11 CP040687.1 Genbank gene 2411980 2413542 . + . ID=gene-IXO1088_011650;Name=IXO1088_011650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011650 CP040687.1 Protein Homology CDS 2411980 2413542 . + 0 ID=cds-QIE15855.1;Parent=gene-IXO1088_011650;Dbxref=NCBI_GP:QIE15855.1;Name=QIE15855.1;Note=Members of the Solute:Sodium Symporter (SSS)%2C TC 2.A.21 as described in tcdb.org%2C catalyze solute:Na+ symport. Known solutes for members of the family include sugars%2C amino acids%2C nucleosides%2C inositols%2C vitamins%2C urea or anions%2C depending on the system.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637142.1;locus_tag=IXO1088_011650;product=sodium/solute symporter;protein_id=QIE15855.1;transl_table=11 CP040687.1 Genbank gene 2413651 2413725 . - . ID=gene-IXO1088_011655;Name=IXO1088_011655;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_011655 CP040687.1 cmsearch ncRNA 2413651 2413725 . - . ID=rna-IXO1088_011655;Parent=gene-IXO1088_011655;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_011655;product=sX9 sRNA CP040687.1 cmsearch exon 2413651 2413725 . - . ID=exon-IXO1088_011655-1;Parent=rna-IXO1088_011655;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_011655;product=sX9 sRNA CP040687.1 Genbank gene 2413787 2415643 . - . ID=gene-IXO1088_011660;Name=IXO1088_011660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011660 CP040687.1 Protein Homology CDS 2413787 2415643 . - 0 ID=cds-QIE15856.1;Parent=gene-IXO1088_011660;Dbxref=NCBI_GP:QIE15856.1;Name=QIE15856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158049.1;locus_tag=IXO1088_011660;product=GGDEF and EAL domain-containing protein;protein_id=QIE15856.1;transl_table=11 CP040687.1 Genbank pseudogene 2415948 2416400 . + . ID=gene-IXO1088_011665;Name=IXO1088_011665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011665;pseudo=true CP040687.1 Protein Homology CDS 2415948 2416400 . + 0 ID=cds-IXO1088_011665;Parent=gene-IXO1088_011665;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1088_011665;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2416743 2416829 . - . ID=gene-IXO1088_011670;Name=IXO1088_011670;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_011670 CP040687.1 tRNAscan-SE tRNA 2416743 2416829 . - . ID=rna-IXO1088_011670;Parent=gene-IXO1088_011670;anticodon=(pos:complement(2416793..2416795));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_011670;product=tRNA-Leu CP040687.1 tRNAscan-SE exon 2416743 2416829 . - . ID=exon-IXO1088_011670-1;Parent=rna-IXO1088_011670;anticodon=(pos:complement(2416793..2416795));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_011670;product=tRNA-Leu CP040687.1 Genbank gene 2416970 2419159 . - . ID=gene-IXO1088_011675;Name=IXO1088_011675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011675 CP040687.1 Protein Homology CDS 2416970 2419159 . - 0 ID=cds-QIE17967.1;Parent=gene-IXO1088_011675;Dbxref=NCBI_GP:QIE17967.1;Name=QIE17967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155718.1;locus_tag=IXO1088_011675;product=glycosyl hydrolase;protein_id=QIE17967.1;transl_table=11 CP040687.1 Genbank gene 2419288 2421066 . - . ID=gene-IXO1088_011680;Name=IXO1088_011680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011680 CP040687.1 Protein Homology CDS 2419288 2421066 . - 0 ID=cds-QIE15857.1;Parent=gene-IXO1088_011680;Dbxref=NCBI_GP:QIE15857.1;Name=QIE15857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408559.1;locus_tag=IXO1088_011680;product=peptidase M14;protein_id=QIE15857.1;transl_table=11 CP040687.1 Genbank pseudogene 2421416 2422259 . + . ID=gene-IXO1088_011685;Name=IXO1088_011685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011685;pseudo=true CP040687.1 Protein Homology CDS 2421416 2422259 . + 0 ID=cds-IXO1088_011685;Parent=gene-IXO1088_011685;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636779.2;locus_tag=IXO1088_011685;product=POT family MFS transporter;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2422267 2422875 . + . ID=gene-IXO1088_011690;Name=IXO1088_011690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011690 CP040687.1 Protein Homology CDS 2422267 2422875 . + 0 ID=cds-QIE15858.1;Parent=gene-IXO1088_011690;Dbxref=NCBI_GP:QIE15858.1;Name=QIE15858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636780.1;locus_tag=IXO1088_011690;product=rhomboid family intramembrane serine protease;protein_id=QIE15858.1;transl_table=11 CP040687.1 Genbank gene 2423209 2423397 . - . ID=gene-IXO1088_011695;Name=IXO1088_011695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011695 CP040687.1 Protein Homology CDS 2423209 2423397 . - 0 ID=cds-QIE15859.1;Parent=gene-IXO1088_011695;Dbxref=NCBI_GP:QIE15859.1;Name=QIE15859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259018.1;locus_tag=IXO1088_011695;product=hypothetical protein;protein_id=QIE15859.1;transl_table=11 CP040687.1 Genbank gene 2423581 2423895 . + . ID=gene-IXO1088_011700;Name=IXO1088_011700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011700 CP040687.1 Protein Homology CDS 2423581 2423895 . + 0 ID=cds-QIE15860.1;Parent=gene-IXO1088_011700;Dbxref=NCBI_GP:QIE15860.1;Name=QIE15860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366253.1;locus_tag=IXO1088_011700;product=N-acetyltransferase;protein_id=QIE15860.1;transl_table=11 CP040687.1 Genbank gene 2423946 2424779 . + . ID=gene-IXO1088_011705;Name=IXO1088_011705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011705 CP040687.1 Protein Homology CDS 2423946 2424779 . + 0 ID=cds-QIE15861.1;Parent=gene-IXO1088_011705;Dbxref=NCBI_GP:QIE15861.1;Name=QIE15861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089774.1;locus_tag=IXO1088_011705;product=DUF4163 domain-containing protein;protein_id=QIE15861.1;transl_table=11 CP040687.1 Genbank gene 2424846 2425346 . + . ID=gene-IXO1088_011710;Name=IXO1088_011710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011710 CP040687.1 Protein Homology CDS 2424846 2425346 . + 0 ID=cds-QIE15862.1;Parent=gene-IXO1088_011710;Dbxref=NCBI_GP:QIE15862.1;Name=QIE15862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636784.1;locus_tag=IXO1088_011710;product=MarR family transcriptional regulator;protein_id=QIE15862.1;transl_table=11 CP040687.1 Genbank gene 2425438 2426016 . - . ID=gene-IXO1088_011715;Name=IXO1088_011715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011715 CP040687.1 Protein Homology CDS 2425438 2426016 . - 0 ID=cds-QIE17968.1;Parent=gene-IXO1088_011715;Dbxref=NCBI_GP:QIE17968.1;Name=QIE17968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113231.1;locus_tag=IXO1088_011715;product=hypothetical protein;protein_id=QIE17968.1;transl_table=11 CP040687.1 Genbank gene 2426178 2426678 . - . ID=gene-IXO1088_011720;Name=IXO1088_011720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011720 CP040687.1 Protein Homology CDS 2426178 2426678 . - 0 ID=cds-QIE15863.1;Parent=gene-IXO1088_011720;Dbxref=NCBI_GP:QIE15863.1;Name=QIE15863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259013.1;locus_tag=IXO1088_011720;product=RNA polymerase sigma factor;protein_id=QIE15863.1;transl_table=11 CP040687.1 Genbank pseudogene 2426756 2428100 . + . ID=gene-IXO1088_011725;Name=IXO1088_011725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011725;pseudo=true CP040687.1 Protein Homology CDS 2426756 2428100 . + 0 ID=cds-IXO1088_011725;Parent=gene-IXO1088_011725;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300258.1;locus_tag=IXO1088_011725;product=peptidase S8;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2428203 2428916 . + . ID=gene-IXO1088_011730;Name=IXO1088_011730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011730 CP040687.1 Protein Homology CDS 2428203 2428916 . + 0 ID=cds-QIE15864.1;Parent=gene-IXO1088_011730;Dbxref=NCBI_GP:QIE15864.1;Name=QIE15864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117317.1;locus_tag=IXO1088_011730;product=hypothetical protein;protein_id=QIE15864.1;transl_table=11 CP040687.1 Genbank gene 2429168 2429407 . + . ID=gene-IXO1088_011735;Name=IXO1088_011735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011735 CP040687.1 Protein Homology CDS 2429168 2429407 . + 0 ID=cds-QIE15865.1;Parent=gene-IXO1088_011735;Dbxref=NCBI_GP:QIE15865.1;Name=QIE15865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300260.1;locus_tag=IXO1088_011735;product=HTH domain-containing protein;protein_id=QIE15865.1;transl_table=11 CP040687.1 Genbank pseudogene 2429448 2431574 . - . ID=gene-IXO1088_011740;Name=IXO1088_011740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011740;pseudo=true CP040687.1 Protein Homology CDS 2429448 2431574 . - 0 ID=cds-IXO1088_011740;Parent=gene-IXO1088_011740;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115989.1;locus_tag=IXO1088_011740;product=M3 family metallopeptidase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2431638 2431886 . + . ID=gene-IXO1088_011745;Name=IXO1088_011745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011745 CP040687.1 Protein Homology CDS 2431638 2431886 . + 0 ID=cds-QIE15866.1;Parent=gene-IXO1088_011745;Dbxref=NCBI_GP:QIE15866.1;Name=QIE15866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005925751.1;locus_tag=IXO1088_011745;product=hypothetical protein;protein_id=QIE15866.1;transl_table=11 CP040687.1 Genbank gene 2431864 2432349 . + . ID=gene-IXO1088_011750;Name=IXO1088_011750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011750 CP040687.1 Protein Homology CDS 2431864 2432349 . + 0 ID=cds-QIE15867.1;Parent=gene-IXO1088_011750;Dbxref=NCBI_GP:QIE15867.1;Name=QIE15867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636786.1;locus_tag=IXO1088_011750;product=glutathione peroxidase;protein_id=QIE15867.1;transl_table=11 CP040687.1 Genbank gene 2432500 2433279 . - . ID=gene-IXO1088_011755;Name=IXO1088_011755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011755 CP040687.1 Protein Homology CDS 2432500 2433279 . - 0 ID=cds-QIE15868.1;Parent=gene-IXO1088_011755;Dbxref=NCBI_GP:QIE15868.1;Name=QIE15868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966679.1;locus_tag=IXO1088_011755;product=ferredoxin--NADP reductase;protein_id=QIE15868.1;transl_table=11 CP040687.1 Genbank gene 2433468 2435348 . - . ID=gene-IXO1088_011760;Name=IXO1088_011760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011760 CP040687.1 Protein Homology CDS 2433468 2435348 . - 0 ID=cds-QIE15869.1;Parent=gene-IXO1088_011760;Dbxref=NCBI_GP:QIE15869.1;Name=QIE15869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911790.1;locus_tag=IXO1088_011760;product=ABC transporter ATP-binding protein;protein_id=QIE15869.1;transl_table=11 CP040687.1 Genbank gene 2435682 2437199 . + . ID=gene-IXO1088_011765;Name=IXO1088_011765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011765 CP040687.1 Protein Homology CDS 2435682 2437199 . + 0 ID=cds-QIE15870.1;Parent=gene-IXO1088_011765;Dbxref=NCBI_GP:QIE15870.1;Name=QIE15870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483539.1;locus_tag=IXO1088_011765;product=fumarate hydratase;protein_id=QIE15870.1;transl_table=11 CP040687.1 Genbank pseudogene 2437336 2437497 . + . ID=gene-IXO1088_011770;Name=IXO1088_011770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011770;pseudo=true CP040687.1 Protein Homology CDS 2437336 2437497 . + 0 ID=cds-IXO1088_011770;Parent=gene-IXO1088_011770;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02798.18;locus_tag=IXO1088_011770;product=glutathione S-transferase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2437518 2437970 . + . ID=gene-IXO1088_011775;Name=IXO1088_011775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011775 CP040687.1 Protein Homology CDS 2437518 2437970 . + 0 ID=cds-QIE15871.1;Parent=gene-IXO1088_011775;Dbxref=NCBI_GP:QIE15871.1;Name=QIE15871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408550.1;locus_tag=IXO1088_011775;product=glutathione S-transferase;protein_id=QIE15871.1;transl_table=11 CP040687.1 Genbank gene 2438261 2438336 . - . ID=gene-IXO1088_011780;Name=IXO1088_011780;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_011780 CP040687.1 cmsearch ncRNA 2438261 2438336 . - . ID=rna-IXO1088_011780;Parent=gene-IXO1088_011780;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_011780;product=sX9 sRNA CP040687.1 cmsearch exon 2438261 2438336 . - . ID=exon-IXO1088_011780-1;Parent=rna-IXO1088_011780;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_011780;product=sX9 sRNA CP040687.1 Genbank pseudogene 2438399 2439450 . - . ID=gene-IXO1088_011785;Name=IXO1088_011785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011785;pseudo=true CP040687.1 Protein Homology CDS 2438399 2439450 . - 0 ID=cds-IXO1088_011785;Parent=gene-IXO1088_011785;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636793.1;locus_tag=IXO1088_011785;product=phospholipase A;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2439773 2440851 . + . ID=gene-IXO1088_011790;Name=IXO1088_011790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011790;pseudo=true CP040687.1 Protein Homology CDS 2439773 2440851 . + 0 ID=cds-IXO1088_011790;Parent=gene-IXO1088_011790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018420704.1;locus_tag=IXO1088_011790;product=IS630 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2441151 2442000 . + . ID=gene-IXO1088_011795;Name=IXO1088_011795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011795;pseudo=true CP040687.1 Protein Homology CDS 2441151 2442000 . + 0 ID=cds-IXO1088_011795;Parent=gene-IXO1088_011795;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408546.1;locus_tag=IXO1088_011795;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2442001 2442210 . + . ID=gene-IXO1088_011800;Name=IXO1088_011800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011800 CP040687.1 Protein Homology CDS 2442001 2442210 . + 0 ID=cds-QIE17969.1;Parent=gene-IXO1088_011800;Dbxref=NCBI_GP:QIE17969.1;Name=QIE17969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005933805.1;locus_tag=IXO1088_011800;product=hypothetical protein;protein_id=QIE17969.1;transl_table=11 CP040687.1 Genbank pseudogene 2442331 2442918 . + . ID=gene-IXO1088_011805;Name=IXO1088_011805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011805;pseudo=true CP040687.1 Protein Homology CDS 2442331 2442918 . + 0 ID=cds-IXO1088_011805;Parent=gene-IXO1088_011805;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_082322974.1;locus_tag=IXO1088_011805;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2442974 2443948 . - . ID=gene-IXO1088_011810;Name=IXO1088_011810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011810 CP040687.1 Protein Homology CDS 2442974 2443948 . - 0 ID=cds-QIE15872.1;Parent=gene-IXO1088_011810;Dbxref=NCBI_GP:QIE15872.1;Name=QIE15872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636816.1;locus_tag=IXO1088_011810;product=GGDEF domain-containing protein;protein_id=QIE15872.1;transl_table=11 CP040687.1 Genbank gene 2444115 2444348 . + . ID=gene-IXO1088_011815;Name=IXO1088_011815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011815 CP040687.1 Protein Homology CDS 2444115 2444348 . + 0 ID=cds-QIE15873.1;Parent=gene-IXO1088_011815;Dbxref=NCBI_GP:QIE15873.1;Name=QIE15873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258999.1;locus_tag=IXO1088_011815;product=hypothetical protein;protein_id=QIE15873.1;transl_table=11 CP040687.1 Genbank pseudogene 2444545 2446249 . - . ID=gene-IXO1088_011820;Name=IXO1088_011820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011820;pseudo=true CP040687.1 Protein Homology CDS 2444545 2446249 . - 0 ID=cds-IXO1088_011820;Parent=gene-IXO1088_011820;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155754.1;locus_tag=IXO1088_011820;product=diguanylate cyclase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2446243 2447002 . - . ID=gene-IXO1088_011825;Name=IXO1088_011825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011825;pseudo=true CP040687.1 Protein Homology CDS 2446243 2447002 . - 0 ID=cds-IXO1088_011825;Parent=gene-IXO1088_011825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_011825;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2447087 2447896 . + . ID=gene-IXO1088_011830;Name=IXO1088_011830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011830;pseudo=true CP040687.1 Protein Homology CDS 2447087 2447896 . + 0 ID=cds-IXO1088_011830;Parent=gene-IXO1088_011830;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444766.1;locus_tag=IXO1088_011830;product=IS630 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2448154 2448672 . + . ID=gene-IXO1088_011835;Name=IXO1088_011835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011835 CP040687.1 Protein Homology CDS 2448154 2448672 . + 0 ID=cds-QIE15874.1;Parent=gene-IXO1088_011835;Dbxref=NCBI_GP:QIE15874.1;Name=QIE15874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017907763.1;locus_tag=IXO1088_011835;product=N-acetyltransferase family protein;protein_id=QIE15874.1;transl_table=11 CP040687.1 Genbank pseudogene 2448827 2450205 . - . ID=gene-IXO1088_011840;Name=IXO1088_011840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011840;pseudo=true CP040687.1 Protein Homology CDS 2448827 2450205 . - 0 ID=cds-IXO1088_011840;Parent=gene-IXO1088_011840;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041183487.1;locus_tag=IXO1088_011840;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2450408 2451727 . - . ID=gene-IXO1088_011845;Name=IXO1088_011845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011845 CP040687.1 Protein Homology CDS 2450408 2451727 . - 0 ID=cds-QIE15875.1;Parent=gene-IXO1088_011845;Dbxref=NCBI_GP:QIE15875.1;Name=QIE15875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_011845;product=IS701 family transposase;protein_id=QIE15875.1;transl_table=11 CP040687.1 Genbank gene 2451778 2452284 . - . ID=gene-IXO1088_011850;Name=IXO1088_011850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011850 CP040687.1 GeneMarkS-2+ CDS 2451778 2452284 . - 0 ID=cds-QIE15876.1;Parent=gene-IXO1088_011850;Dbxref=NCBI_GP:QIE15876.1;Name=QIE15876.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_011850;product=hypothetical protein;protein_id=QIE15876.1;transl_table=11 CP040687.1 Genbank gene 2452756 2453925 . + . ID=gene-IXO1088_011855;Name=IXO1088_011855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011855 CP040687.1 Protein Homology CDS 2452756 2453925 . + 0 ID=cds-QIE17970.1;Parent=gene-IXO1088_011855;Dbxref=NCBI_GP:QIE17970.1;Name=QIE17970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019184005.1;locus_tag=IXO1088_011855;product=AAA family ATPase;protein_id=QIE17970.1;transl_table=11 CP040687.1 Genbank gene 2453936 2454904 . + . ID=gene-IXO1088_011860;Name=IXO1088_011860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011860 CP040687.1 Protein Homology CDS 2453936 2454904 . + 0 ID=cds-QIE15877.1;Parent=gene-IXO1088_011860;Dbxref=NCBI_GP:QIE15877.1;Name=QIE15877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_011860;product=IS5-like element ISXo1 family transposase;protein_id=QIE15877.1;transl_table=11 CP040687.1 Genbank pseudogene 2455037 2456185 . + . ID=gene-IXO1088_011865;Name=IXO1088_011865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011865;pseudo=true CP040687.1 Protein Homology CDS 2455037 2456185 . + 0 ID=cds-IXO1088_011865;Parent=gene-IXO1088_011865;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011801828.1;locus_tag=IXO1088_011865;product=peptidase S8 and S53%2C subtilisin%2C kexin%2C sedolisin;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2456312 2457280 . - . ID=gene-IXO1088_011870;Name=IXO1088_011870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011870 CP040687.1 Protein Homology CDS 2456312 2457280 . - 0 ID=cds-QIE15878.1;Parent=gene-IXO1088_011870;Dbxref=NCBI_GP:QIE15878.1;Name=QIE15878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_011870;product=IS5-like element ISXo1 family transposase;protein_id=QIE15878.1;transl_table=11 CP040687.1 Genbank pseudogene 2457343 2458425 . + . ID=gene-IXO1088_011875;Name=IXO1088_011875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011875;pseudo=true CP040687.1 Protein Homology CDS 2457343 2458425 . + 0 ID=cds-IXO1088_011875;Parent=gene-IXO1088_011875;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011801828.1;locus_tag=IXO1088_011875;product=S8 family peptidase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2458507 2459721 . - . ID=gene-IXO1088_011880;Name=IXO1088_011880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011880 CP040687.1 Protein Homology CDS 2458507 2459721 . - 0 ID=cds-QIE15879.1;Parent=gene-IXO1088_011880;Dbxref=NCBI_GP:QIE15879.1;Name=QIE15879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1088_011880;product=IS4 family transposase;protein_id=QIE15879.1;transl_table=11 CP040687.1 Genbank pseudogene 2459758 2459847 . + . ID=gene-IXO1088_011885;Name=IXO1088_011885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011885;pseudo=true CP040687.1 Protein Homology CDS 2459758 2459847 . + 0 ID=cds-IXO1088_011885;Parent=gene-IXO1088_011885;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257538.1;locus_tag=IXO1088_011885;product=alcohol dehydrogenase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2459972 2461447 . + . ID=gene-IXO1088_011890;Name=IXO1088_011890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011890 CP040687.1 Protein Homology CDS 2459972 2461447 . + 0 ID=cds-QIE15880.1;Parent=gene-IXO1088_011890;Dbxref=NCBI_GP:QIE15880.1;Name=QIE15880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1088_011890;product=IS5-like element ISXoo5 family transposase;protein_id=QIE15880.1;transl_table=11 CP040687.1 Genbank gene 2461498 2462517 . - . ID=gene-IXO1088_011895;Name=IXO1088_011895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011895 CP040687.1 Protein Homology CDS 2461498 2462517 . - 0 ID=cds-QIE15881.1;Parent=gene-IXO1088_011895;Dbxref=NCBI_GP:QIE15881.1;Name=QIE15881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019398951.1;locus_tag=IXO1088_011895;product=transposase;protein_id=QIE15881.1;transl_table=11 CP040687.1 Genbank gene 2462801 2464381 . + . ID=gene-IXO1088_011900;Name=IXO1088_011900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011900 CP040687.1 Protein Homology CDS 2462801 2464381 . + 0 ID=cds-QIE17971.1;Parent=gene-IXO1088_011900;Dbxref=NCBI_GP:QIE17971.1;Name=QIE17971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005996627.1;locus_tag=IXO1088_011900;product=ATP-dependent endonuclease;protein_id=QIE17971.1;transl_table=11 CP040687.1 Genbank pseudogene 2464359 2465454 . + . ID=gene-IXO1088_011905;Name=IXO1088_011905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011905;pseudo=true CP040687.1 Protein Homology CDS 2464359 2465454 . + 0 ID=cds-IXO1088_011905;Parent=gene-IXO1088_011905;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012480224.1;locus_tag=IXO1088_011905;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2465592 2465939 . + . ID=gene-IXO1088_011910;Name=IXO1088_011910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011910 CP040687.1 Protein Homology CDS 2465592 2465939 . + 0 ID=cds-QIE15882.1;Parent=gene-IXO1088_011910;Dbxref=NCBI_GP:QIE15882.1;Name=QIE15882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014159627.1;locus_tag=IXO1088_011910;product=helix-turn-helix transcriptional regulator;protein_id=QIE15882.1;transl_table=11 CP040687.1 Genbank gene 2465936 2466466 . + . ID=gene-IXO1088_011915;Name=IXO1088_011915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011915 CP040687.1 Protein Homology CDS 2465936 2466466 . + 0 ID=cds-QIE15883.1;Parent=gene-IXO1088_011915;Dbxref=NCBI_GP:QIE15883.1;Name=QIE15883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014159626.1;locus_tag=IXO1088_011915;product=arsenate reductase ArsC;protein_id=QIE15883.1;transl_table=11 CP040687.1 Genbank gene 2466477 2466890 . + . ID=gene-IXO1088_011920;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=IXO1088_011920 CP040687.1 Protein Homology CDS 2466477 2466890 . + 0 ID=cds-QIE15884.1;Parent=gene-IXO1088_011920;Dbxref=NCBI_GP:QIE15884.1;Name=QIE15884.1;gbkey=CDS;gene=arsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005996623.1;locus_tag=IXO1088_011920;product=arsenate reductase (glutaredoxin);protein_id=QIE15884.1;transl_table=11 CP040687.1 Genbank gene 2466887 2467612 . + . ID=gene-IXO1088_011925;Name=arsH;gbkey=Gene;gene=arsH;gene_biotype=protein_coding;locus_tag=IXO1088_011925 CP040687.1 Protein Homology CDS 2466887 2467612 . + 0 ID=cds-QIE15885.1;Parent=gene-IXO1088_011925;Dbxref=NCBI_GP:QIE15885.1;Name=QIE15885.1;gbkey=CDS;gene=arsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444891.1;locus_tag=IXO1088_011925;product=arsenical resistance protein ArsH;protein_id=QIE15885.1;transl_table=11 CP040687.1 Genbank gene 2467631 2468935 . + . ID=gene-IXO1088_011930;Name=IXO1088_011930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011930 CP040687.1 Protein Homology CDS 2467631 2468935 . + 0 ID=cds-QIE15886.1;Parent=gene-IXO1088_011930;Dbxref=NCBI_GP:QIE15886.1;Name=QIE15886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444892.1;locus_tag=IXO1088_011930;product=arsenic transporter;protein_id=QIE15886.1;transl_table=11 CP040687.1 Genbank gene 2469199 2469555 . + . ID=gene-IXO1088_011935;Name=IXO1088_011935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011935 CP040687.1 Protein Homology CDS 2469199 2469555 . + 0 ID=cds-QIE15887.1;Parent=gene-IXO1088_011935;Dbxref=NCBI_GP:QIE15887.1;Name=QIE15887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010795881.1;locus_tag=IXO1088_011935;product=rhodanese-like domain-containing protein;protein_id=QIE15887.1;transl_table=11 CP040687.1 Genbank pseudogene 2469573 2470508 . + . ID=gene-IXO1088_011940;Name=IXO1088_011940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011940;pseudo=true CP040687.1 Protein Homology CDS 2469573 2470508 . + 0 ID=cds-IXO1088_011940;Parent=gene-IXO1088_011940;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019398959.1;locus_tag=IXO1088_011940;product=site-specific integrase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2470551 2473511 . + . ID=gene-IXO1088_011945;Name=IXO1088_011945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011945 CP040687.1 Protein Homology CDS 2470551 2473511 . + 0 ID=cds-QIE15888.1;Parent=gene-IXO1088_011945;Dbxref=NCBI_GP:QIE15888.1;Name=QIE15888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611205.1;locus_tag=IXO1088_011945;product=Tn3 family transposase;protein_id=QIE15888.1;transl_table=11 CP040687.1 Genbank pseudogene 2473599 2473832 . + . ID=gene-IXO1088_011950;Name=IXO1088_011950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011950;pseudo=true CP040687.1 Protein Homology CDS 2473599 2473832 . + 0 ID=cds-IXO1088_011950;Parent=gene-IXO1088_011950;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011238416.1;locus_tag=IXO1088_011950;product=IS630 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2474506 2477901 . - . ID=gene-IXO1088_011955;Name=IXO1088_011955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011955 CP040687.1 Protein Homology CDS 2474506 2477901 . - 0 ID=cds-QIE15889.1;Parent=gene-IXO1088_011955;Dbxref=NCBI_GP:QIE15889.1;Name=QIE15889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157546.1;locus_tag=IXO1088_011955;product=PAS domain S-box protein;protein_id=QIE15889.1;transl_table=11 CP040687.1 Genbank gene 2478116 2478496 . - . ID=gene-IXO1088_011960;Name=IXO1088_011960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011960 CP040687.1 Protein Homology CDS 2478116 2478496 . - 0 ID=cds-QIE15890.1;Parent=gene-IXO1088_011960;Dbxref=NCBI_GP:QIE15890.1;Name=QIE15890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258994.1;locus_tag=IXO1088_011960;product=response regulator;protein_id=QIE15890.1;transl_table=11 CP040687.1 Genbank gene 2478635 2478721 . + . ID=gene-IXO1088_011965;Name=IXO1088_011965;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_011965 CP040687.1 tRNAscan-SE tRNA 2478635 2478721 . + . ID=rna-IXO1088_011965;Parent=gene-IXO1088_011965;anticodon=(pos:2478669..2478671);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_011965;product=tRNA-Leu CP040687.1 tRNAscan-SE exon 2478635 2478721 . + . ID=exon-IXO1088_011965-1;Parent=rna-IXO1088_011965;anticodon=(pos:2478669..2478671);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_011965;product=tRNA-Leu CP040687.1 Genbank pseudogene 2479076 2479515 . + . ID=gene-IXO1088_011970;Name=IXO1088_011970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011970;pseudo=true CP040687.1 Protein Homology CDS 2479076 2479515 . + 0 ID=cds-IXO1088_011970;Parent=gene-IXO1088_011970;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804826.1;locus_tag=IXO1088_011970;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2479512 2479715 . + . ID=gene-IXO1088_011975;Name=IXO1088_011975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011975 CP040687.1 GeneMarkS-2+ CDS 2479512 2479715 . + 0 ID=cds-QIE15891.1;Parent=gene-IXO1088_011975;Dbxref=NCBI_GP:QIE15891.1;Name=QIE15891.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_011975;product=hypothetical protein;protein_id=QIE15891.1;transl_table=11 CP040687.1 Genbank gene 2479758 2480521 . + . ID=gene-IXO1088_011980;Name=IXO1088_011980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011980 CP040687.1 Protein Homology CDS 2479758 2480073 . + 0 ID=cds-QIE15892.1;Parent=gene-IXO1088_011980;Dbxref=NCBI_GP:QIE15892.1;Name=QIE15892.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_011980;product=IS5 family transposase;protein_id=QIE15892.1;transl_table=11 CP040687.1 Protein Homology CDS 2480073 2480521 . + 2 ID=cds-QIE15892.1;Parent=gene-IXO1088_011980;Dbxref=NCBI_GP:QIE15892.1;Name=QIE15892.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_011980;product=IS5 family transposase;protein_id=QIE15892.1;transl_table=11 CP040687.1 Genbank pseudogene 2480555 2481937 . - . ID=gene-IXO1088_011985;Name=IXO1088_011985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_011985;pseudo=true CP040687.1 Protein Homology CDS 2480555 2481937 . - 0 ID=cds-IXO1088_011985;Parent=gene-IXO1088_011985;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1088_011985;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2482158 2482817 . - . ID=gene-IXO1088_011990;Name=IXO1088_011990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011990 CP040687.1 Protein Homology CDS 2482158 2482817 . - 0 ID=cds-QIE15893.1;Parent=gene-IXO1088_011990;Dbxref=NCBI_GP:QIE15893.1;Name=QIE15893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637501.1;locus_tag=IXO1088_011990;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=QIE15893.1;transl_table=11 CP040687.1 Genbank gene 2482873 2484789 . - . ID=gene-IXO1088_011995;Name=IXO1088_011995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_011995 CP040687.1 Protein Homology CDS 2482873 2484789 . - 0 ID=cds-QIE15894.1;Parent=gene-IXO1088_011995;Dbxref=NCBI_GP:QIE15894.1;Name=QIE15894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637500.1;locus_tag=IXO1088_011995;product=phosphogluconate dehydratase;protein_id=QIE15894.1;transl_table=11 CP040687.1 Genbank gene 2484892 2485611 . - . ID=gene-IXO1088_012000;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=IXO1088_012000 CP040687.1 Protein Homology CDS 2484892 2485611 . - 0 ID=cds-QIE15895.1;Parent=gene-IXO1088_012000;Dbxref=NCBI_GP:QIE15895.1;Name=QIE15895.1;gbkey=CDS;gene=pgl;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258989.1;locus_tag=IXO1088_012000;product=6-phosphogluconolactonase;protein_id=QIE15895.1;transl_table=11 CP040687.1 Genbank gene 2485608 2486615 . - . ID=gene-IXO1088_012005;Name=IXO1088_012005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012005 CP040687.1 Protein Homology CDS 2485608 2486615 . - 0 ID=cds-QIE15896.1;Parent=gene-IXO1088_012005;Dbxref=NCBI_GP:QIE15896.1;Name=QIE15896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637498.1;locus_tag=IXO1088_012005;product=glucokinase;protein_id=QIE15896.1;transl_table=11 CP040687.1 Genbank gene 2486612 2488042 . - . ID=gene-IXO1088_012010;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=IXO1088_012010 CP040687.1 Protein Homology CDS 2486612 2488042 . - 0 ID=cds-QIE15897.1;Parent=gene-IXO1088_012010;Dbxref=NCBI_GP:QIE15897.1;Name=QIE15897.1;gbkey=CDS;gene=zwf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637497.1;locus_tag=IXO1088_012010;product=glucose-6-phosphate dehydrogenase;protein_id=QIE15897.1;transl_table=11 CP040687.1 Genbank gene 2488464 2489561 . + . ID=gene-IXO1088_012015;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=IXO1088_012015 CP040687.1 Protein Homology CDS 2488464 2489561 . + 0 ID=cds-QIE15898.1;Parent=gene-IXO1088_012015;Dbxref=NCBI_GP:QIE15898.1;Name=QIE15898.1;gbkey=CDS;gene=ugpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503506.1;locus_tag=IXO1088_012015;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=QIE15898.1;transl_table=11 CP040687.1 Genbank gene 2489611 2489685 . + . ID=gene-IXO1088_012020;Name=IXO1088_012020;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_012020 CP040687.1 cmsearch ncRNA 2489611 2489685 . + . ID=rna-IXO1088_012020;Parent=gene-IXO1088_012020;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_012020;product=sX9 sRNA CP040687.1 cmsearch exon 2489611 2489685 . + . ID=exon-IXO1088_012020-1;Parent=rna-IXO1088_012020;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_012020;product=sX9 sRNA CP040687.1 Genbank gene 2489690 2490562 . - . ID=gene-IXO1088_012025;Name=IXO1088_012025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012025 CP040687.1 Protein Homology CDS 2489690 2490562 . - 0 ID=cds-QIE15899.1;Parent=gene-IXO1088_012025;Dbxref=NCBI_GP:QIE15899.1;Name=QIE15899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637495.1;locus_tag=IXO1088_012025;product=folate-binding protein YgfZ;protein_id=QIE15899.1;transl_table=11 CP040687.1 Genbank gene 2490506 2490772 . + . ID=gene-IXO1088_012030;Name=IXO1088_012030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012030 CP040687.1 Protein Homology CDS 2490506 2490772 . + 0 ID=cds-QIE15900.1;Parent=gene-IXO1088_012030;Dbxref=NCBI_GP:QIE15900.1;Name=QIE15900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637494.1;locus_tag=IXO1088_012030;product=DUF1674 domain-containing protein;protein_id=QIE15900.1;transl_table=11 CP040687.1 Genbank gene 2490832 2491227 . + . ID=gene-IXO1088_012035;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;locus_tag=IXO1088_012035 CP040687.1 Protein Homology CDS 2490832 2491227 . + 0 ID=cds-QIE15901.1;Parent=gene-IXO1088_012035;Dbxref=NCBI_GP:QIE15901.1;Name=QIE15901.1;gbkey=CDS;gene=sdhC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637493.1;locus_tag=IXO1088_012035;product=succinate dehydrogenase%2C cytochrome b556 subunit;protein_id=QIE15901.1;transl_table=11 CP040687.1 Genbank gene 2491224 2491610 . + . ID=gene-IXO1088_012040;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=IXO1088_012040 CP040687.1 Protein Homology CDS 2491224 2491610 . + 0 ID=cds-QIE15902.1;Parent=gene-IXO1088_012040;Dbxref=NCBI_GP:QIE15902.1;Name=QIE15902.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637492.1;locus_tag=IXO1088_012040;product=succinate dehydrogenase%2C hydrophobic membrane anchor protein;protein_id=QIE15902.1;transl_table=11 CP040687.1 Genbank gene 2491645 2493435 . + . ID=gene-IXO1088_012045;Name=IXO1088_012045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012045 CP040687.1 Protein Homology CDS 2491645 2493435 . + 0 ID=cds-QIE15903.1;Parent=gene-IXO1088_012045;Dbxref=NCBI_GP:QIE15903.1;Name=QIE15903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851880.1;locus_tag=IXO1088_012045;product=succinate dehydrogenase flavoprotein subunit;protein_id=QIE15903.1;transl_table=11 CP040687.1 Genbank gene 2493439 2493648 . + . ID=gene-IXO1088_012050;Name=IXO1088_012050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012050 CP040687.1 Protein Homology CDS 2493439 2493648 . + 0 ID=cds-QIE15904.1;Parent=gene-IXO1088_012050;Dbxref=NCBI_GP:QIE15904.1;Name=QIE15904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300226.1;locus_tag=IXO1088_012050;product=hypothetical protein;protein_id=QIE15904.1;transl_table=11 CP040687.1 Genbank gene 2493665 2494447 . + . ID=gene-IXO1088_012055;Name=IXO1088_012055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012055 CP040687.1 Protein Homology CDS 2493665 2494447 . + 0 ID=cds-QIE15905.1;Parent=gene-IXO1088_012055;Dbxref=NCBI_GP:QIE15905.1;Name=QIE15905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637490.1;locus_tag=IXO1088_012055;product=succinate dehydrogenase iron-sulfur subunit;protein_id=QIE15905.1;transl_table=11 CP040687.1 Genbank gene 2494558 2494806 . + . ID=gene-IXO1088_012060;Name=IXO1088_012060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012060 CP040687.1 Protein Homology CDS 2494558 2494806 . + 0 ID=cds-QIE15906.1;Parent=gene-IXO1088_012060;Dbxref=NCBI_GP:QIE15906.1;Name=QIE15906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802215.1;locus_tag=IXO1088_012060;product=succinate dehydrogenase assembly factor 2;protein_id=QIE15906.1;transl_table=11 CP040687.1 Genbank gene 2494757 2495209 . + . ID=gene-IXO1088_012065;Name=IXO1088_012065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012065 CP040687.1 Protein Homology CDS 2494757 2495209 . + 0 ID=cds-QIE15907.1;Parent=gene-IXO1088_012065;Dbxref=NCBI_GP:QIE15907.1;Name=QIE15907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156610.1;locus_tag=IXO1088_012065;product=hypothetical protein;protein_id=QIE15907.1;transl_table=11 CP040687.1 Genbank gene 2495233 2496474 . + . ID=gene-IXO1088_012070;Name=IXO1088_012070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012070 CP040687.1 Protein Homology CDS 2495233 2496474 . + 0 ID=cds-QIE15908.1;Parent=gene-IXO1088_012070;Dbxref=NCBI_GP:QIE15908.1;Name=QIE15908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902586.1;locus_tag=IXO1088_012070;product=lipoprotein-releasing ABC transporter permease subunit;protein_id=QIE15908.1;transl_table=11 CP040687.1 Genbank gene 2496467 2497201 . + . ID=gene-IXO1088_012075;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=IXO1088_012075 CP040687.1 Protein Homology CDS 2496467 2497201 . + 0 ID=cds-QIE15909.1;Parent=gene-IXO1088_012075;Dbxref=NCBI_GP:QIE15909.1;Name=QIE15909.1;gbkey=CDS;gene=lolD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472015.1;locus_tag=IXO1088_012075;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=QIE15909.1;transl_table=11 CP040687.1 Genbank pseudogene 2497374 2498438 . - . ID=gene-IXO1088_012080;Name=IXO1088_012080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_012080;pseudo=true CP040687.1 Protein Homology CDS 2497374 2498438 . - 0 ID=cds-IXO1088_012080;Parent=gene-IXO1088_012080;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637485.1;locus_tag=IXO1088_012080;product=SDR family oxidoreductase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2498595 2499560 . - . ID=gene-IXO1088_012085;Name=IXO1088_012085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012085 CP040687.1 Protein Homology CDS 2498595 2499560 . - 0 ID=cds-QIE15910.1;Parent=gene-IXO1088_012085;Dbxref=NCBI_GP:QIE15910.1;Name=QIE15910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_012085;product=IS1595 family transposase;protein_id=QIE15910.1;transl_table=11 CP040687.1 Genbank gene 2499814 2502222 . + . ID=gene-IXO1088_012090;Name=IXO1088_012090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012090 CP040687.1 Protein Homology CDS 2499814 2502222 . + 0 ID=cds-QIE15911.1;Parent=gene-IXO1088_012090;Dbxref=NCBI_GP:QIE15911.1;Name=QIE15911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118700.1;locus_tag=IXO1088_012090;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=QIE15911.1;transl_table=11 CP040687.1 Genbank gene 2502251 2502913 . + . ID=gene-IXO1088_012095;Name=IXO1088_012095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012095 CP040687.1 Protein Homology CDS 2502251 2502913 . + 0 ID=cds-QIE15912.1;Parent=gene-IXO1088_012095;Dbxref=NCBI_GP:QIE15912.1;Name=QIE15912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916730.1;locus_tag=IXO1088_012095;product=MotA/TolQ/ExbB proton channel family protein;protein_id=QIE15912.1;transl_table=11 CP040687.1 Genbank gene 2502917 2503381 . + . ID=gene-IXO1088_012100;Name=IXO1088_012100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012100 CP040687.1 Protein Homology CDS 2502917 2503381 . + 0 ID=cds-QIE15913.1;Parent=gene-IXO1088_012100;Dbxref=NCBI_GP:QIE15913.1;Name=QIE15913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115686.1;locus_tag=IXO1088_012100;product=biopolymer transporter ExbD;protein_id=QIE15913.1;transl_table=11 CP040687.1 Genbank gene 2503378 2505147 . + . ID=gene-IXO1088_012105;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=IXO1088_012105 CP040687.1 Protein Homology CDS 2503378 2505147 . + 0 ID=cds-QIE15914.1;Parent=gene-IXO1088_012105;Dbxref=NCBI_GP:QIE15914.1;Name=QIE15914.1;gbkey=CDS;gene=msbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802197.1;locus_tag=IXO1088_012105;product=lipid A export permease/ATP-binding protein MsbA;protein_id=QIE15914.1;transl_table=11 CP040687.1 Genbank gene 2505144 2506184 . + . ID=gene-IXO1088_012110;Name=IXO1088_012110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012110 CP040687.1 Protein Homology CDS 2505144 2506184 . + 0 ID=cds-QIE15915.1;Parent=gene-IXO1088_012110;Dbxref=NCBI_GP:QIE15915.1;Name=QIE15915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449592.1;locus_tag=IXO1088_012110;product=tetraacyldisaccharide 4'-kinase;protein_id=QIE15915.1;transl_table=11 CP040687.1 Genbank gene 2506476 2507255 . + . ID=gene-IXO1088_012115;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=IXO1088_012115 CP040687.1 Protein Homology CDS 2506476 2507255 . + 0 ID=cds-QIE15916.1;Parent=gene-IXO1088_012115;Dbxref=NCBI_GP:QIE15916.1;Name=QIE15916.1;gbkey=CDS;gene=kdsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373332.1;locus_tag=IXO1088_012115;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=QIE15916.1;transl_table=11 CP040687.1 Genbank gene 2507252 2507716 . + . ID=gene-IXO1088_012120;Name=IXO1088_012120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012120 CP040687.1 Protein Homology CDS 2507252 2507716 . + 0 ID=cds-QIE15917.1;Parent=gene-IXO1088_012120;Dbxref=NCBI_GP:QIE15917.1;Name=QIE15917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637478.1;locus_tag=IXO1088_012120;product=low molecular weight phosphotyrosine protein phosphatase;protein_id=QIE15917.1;transl_table=11 CP040687.1 Genbank gene 2507659 2509158 . + . ID=gene-IXO1088_012125;Name=IXO1088_012125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012125 CP040687.1 Protein Homology CDS 2507659 2509158 . + 0 ID=cds-QIE15918.1;Parent=gene-IXO1088_012125;Dbxref=NCBI_GP:QIE15918.1;Name=QIE15918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637477.1;locus_tag=IXO1088_012125;product=hypothetical protein;protein_id=QIE15918.1;transl_table=11 CP040687.1 Genbank gene 2509155 2511011 . + . ID=gene-IXO1088_012130;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=IXO1088_012130 CP040687.1 Protein Homology CDS 2509155 2511011 . + 0 ID=cds-QIE15919.1;Parent=gene-IXO1088_012130;Dbxref=NCBI_GP:QIE15919.1;Name=QIE15919.1;gbkey=CDS;gene=uvrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637476.1;locus_tag=IXO1088_012130;product=excinuclease ABC subunit UvrC;protein_id=QIE15919.1;transl_table=11 CP040687.1 Genbank gene 2511011 2511643 . + . ID=gene-IXO1088_012135;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=IXO1088_012135 CP040687.1 Protein Homology CDS 2511011 2511643 . + 0 ID=cds-QIE15920.1;Parent=gene-IXO1088_012135;Dbxref=NCBI_GP:QIE15920.1;Name=QIE15920.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637475.1;locus_tag=IXO1088_012135;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=QIE15920.1;transl_table=11 CP040687.1 Genbank gene 2511680 2511755 . + . ID=gene-IXO1088_012140;Name=IXO1088_012140;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_012140 CP040687.1 tRNAscan-SE tRNA 2511680 2511755 . + . ID=rna-IXO1088_012140;Parent=gene-IXO1088_012140;anticodon=(pos:2511713..2511715);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_012140;product=tRNA-Gly CP040687.1 tRNAscan-SE exon 2511680 2511755 . + . ID=exon-IXO1088_012140-1;Parent=rna-IXO1088_012140;anticodon=(pos:2511713..2511715);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_012140;product=tRNA-Gly CP040687.1 Genbank gene 2511824 2511897 . + . ID=gene-IXO1088_012145;Name=IXO1088_012145;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_012145 CP040687.1 tRNAscan-SE tRNA 2511824 2511897 . + . ID=rna-IXO1088_012145;Parent=gene-IXO1088_012145;anticodon=(pos:2511856..2511858);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_012145;product=tRNA-Cys CP040687.1 tRNAscan-SE exon 2511824 2511897 . + . ID=exon-IXO1088_012145-1;Parent=rna-IXO1088_012145;anticodon=(pos:2511856..2511858);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_012145;product=tRNA-Cys CP040687.1 Genbank gene 2511980 2512055 . + . ID=gene-IXO1088_012150;Name=IXO1088_012150;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_012150 CP040687.1 tRNAscan-SE tRNA 2511980 2512055 . + . ID=rna-IXO1088_012150;Parent=gene-IXO1088_012150;anticodon=(pos:2512013..2512015);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_012150;product=tRNA-Gly CP040687.1 tRNAscan-SE exon 2511980 2512055 . + . ID=exon-IXO1088_012150-1;Parent=rna-IXO1088_012150;anticodon=(pos:2512013..2512015);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_012150;product=tRNA-Gly CP040687.1 Genbank gene 2512118 2512624 . - . ID=gene-IXO1088_012155;Name=IXO1088_012155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012155 CP040687.1 Protein Homology CDS 2512118 2512624 . - 0 ID=cds-QIE15921.1;Parent=gene-IXO1088_012155;Dbxref=NCBI_GP:QIE15921.1;Name=QIE15921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444921.1;locus_tag=IXO1088_012155;product=glyoxalase;protein_id=QIE15921.1;transl_table=11 CP040687.1 Genbank gene 2512791 2513777 . - . ID=gene-IXO1088_012160;Name=IXO1088_012160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012160 CP040687.1 Protein Homology CDS 2512791 2513777 . - 0 ID=cds-QIE15922.1;Parent=gene-IXO1088_012160;Dbxref=NCBI_GP:QIE15922.1;Name=QIE15922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408523.1;locus_tag=IXO1088_012160;product=IS30 family transposase;protein_id=QIE15922.1;transl_table=11 CP040687.1 Genbank pseudogene 2513741 2514652 . + . ID=gene-IXO1088_012165;Name=IXO1088_012165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_012165;pseudo=true CP040687.1 Protein Homology CDS 2513741 2514652 . + 0 ID=cds-IXO1088_012165;Parent=gene-IXO1088_012165;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557964.1;locus_tag=IXO1088_012165;product=IS256 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2514742 2515698 . + . ID=gene-IXO1088_012170;Name=IXO1088_012170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012170 CP040687.1 Protein Homology CDS 2514742 2515698 . + 0 ID=cds-QIE15923.1;Parent=gene-IXO1088_012170;Dbxref=NCBI_GP:QIE15923.1;Name=QIE15923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1088_012170;product=IS30-like element IS1112b family transposase;protein_id=QIE15923.1;transl_table=11 CP040687.1 Genbank pseudogene 2516144 2516722 . - . ID=gene-IXO1088_012175;Name=IXO1088_012175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_012175;pseudo=true CP040687.1 Protein Homology CDS 2516144 2516722 . - 0 ID=cds-IXO1088_012175;Parent=gene-IXO1088_012175;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_082322974.1;locus_tag=IXO1088_012175;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2516756 2517427 . - . ID=gene-IXO1088_012180;Name=IXO1088_012180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012180 CP040687.1 Protein Homology CDS 2516756 2517427 . - 0 ID=cds-QIE15924.1;Parent=gene-IXO1088_012180;Dbxref=NCBI_GP:QIE15924.1;Name=QIE15924.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=IXO1088_012180;product=IS3 family transposase;protein_id=QIE15924.1;transl_table=11 CP040687.1 Genbank gene 2517424 2517645 . - . ID=gene-IXO1088_012185;Name=IXO1088_012185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012185 CP040687.1 Protein Homology CDS 2517424 2517645 . - 0 ID=cds-QIE15925.1;Parent=gene-IXO1088_012185;Dbxref=NCBI_GP:QIE15925.1;Name=QIE15925.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01527.18;locus_tag=IXO1088_012185;product=IS3 family transposase;protein_id=QIE15925.1;transl_table=11 CP040687.1 Genbank pseudogene 2517819 2521919 . - . ID=gene-IXO1088_012190;Name=IXO1088_012190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_012190;pseudo=true CP040687.1 Protein Homology CDS 2517819 2521919 . - 0 ID=cds-IXO1088_012190;Parent=gene-IXO1088_012190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258958.1;locus_tag=IXO1088_012190;product=avirulence protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2522059 2522358 . - . ID=gene-IXO1088_012195;Name=IXO1088_012195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012195 CP040687.1 Protein Homology CDS 2522059 2522358 . - 0 ID=cds-QIE15926.1;Parent=gene-IXO1088_012195;Dbxref=NCBI_GP:QIE15926.1;Name=QIE15926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408930.1;locus_tag=IXO1088_012195;product=hypothetical protein;protein_id=QIE15926.1;transl_table=11 CP040687.1 Genbank gene 2522362 2522556 . - . ID=gene-IXO1088_012200;Name=IXO1088_012200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012200 CP040687.1 Protein Homology CDS 2522362 2522556 . - 0 ID=cds-QIE15927.1;Parent=gene-IXO1088_012200;Dbxref=NCBI_GP:QIE15927.1;Name=QIE15927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444931.1;locus_tag=IXO1088_012200;product=hypothetical protein;protein_id=QIE15927.1;transl_table=11 CP040687.1 Genbank gene 2522787 2523550 . - . ID=gene-IXO1088_012205;Name=IXO1088_012205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012205 CP040687.1 Protein Homology CDS 2523235 2523550 . - 0 ID=cds-QIE15928.1;Parent=gene-IXO1088_012205;Dbxref=NCBI_GP:QIE15928.1;Name=QIE15928.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_012205;product=IS5 family transposase;protein_id=QIE15928.1;transl_table=11 CP040687.1 Protein Homology CDS 2522787 2523235 . - 2 ID=cds-QIE15928.1;Parent=gene-IXO1088_012205;Dbxref=NCBI_GP:QIE15928.1;Name=QIE15928.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_012205;product=IS5 family transposase;protein_id=QIE15928.1;transl_table=11 CP040687.1 Genbank gene 2523640 2527428 . - . ID=gene-IXO1088_012210;Name=IXO1088_012210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012210 CP040687.1 Protein Homology CDS 2523640 2527428 . - 0 ID=cds-QIE15929.1;Parent=gene-IXO1088_012210;Dbxref=NCBI_GP:QIE15929.1;Name=QIE15929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409626.1;locus_tag=IXO1088_012210;product=avirulence protein;protein_id=QIE15929.1;transl_table=11 CP040687.1 Genbank gene 2527957 2528736 . - . ID=gene-IXO1088_012215;Name=IXO1088_012215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012215 CP040687.1 Protein Homology CDS 2527957 2528736 . - 0 ID=cds-QIE15930.1;Parent=gene-IXO1088_012215;Dbxref=NCBI_GP:QIE15930.1;Name=QIE15930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258951.1;locus_tag=IXO1088_012215;product=DUF4990 domain-containing protein;protein_id=QIE15930.1;transl_table=11 CP040687.1 Genbank gene 2528778 2528876 . + . ID=gene-IXO1088_012220;Name=IXO1088_012220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012220 CP040687.1 Protein Homology CDS 2528778 2528876 . + 0 ID=cds-QIE15931.1;Parent=gene-IXO1088_012220;Dbxref=NCBI_GP:QIE15931.1;Name=QIE15931.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02810.13;locus_tag=IXO1088_012220;product=hypothetical protein;protein_id=QIE15931.1;transl_table=11 CP040687.1 Genbank pseudogene 2529166 2529489 . - . ID=gene-IXO1088_012225;Name=IXO1088_012225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_012225;pseudo=true CP040687.1 Protein Homology CDS 2529166 2529489 . - 0 ID=cds-IXO1088_012225;Parent=gene-IXO1088_012225;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003474431.1;locus_tag=IXO1088_012225;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2529630 2529815 . + . ID=gene-IXO1088_012230;Name=IXO1088_012230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012230 CP040687.1 Protein Homology CDS 2529630 2529815 . + 0 ID=cds-QIE15932.1;Parent=gene-IXO1088_012230;Dbxref=NCBI_GP:QIE15932.1;Name=QIE15932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408509.1;locus_tag=IXO1088_012230;product=hypothetical protein;protein_id=QIE15932.1;transl_table=11 CP040687.1 Genbank gene 2529815 2530018 . + . ID=gene-IXO1088_012235;Name=IXO1088_012235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012235 CP040687.1 Protein Homology CDS 2529815 2530018 . + 0 ID=cds-QIE15933.1;Parent=gene-IXO1088_012235;Dbxref=NCBI_GP:QIE15933.1;Name=QIE15933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408508.1;locus_tag=IXO1088_012235;product=hypothetical protein;protein_id=QIE15933.1;transl_table=11 CP040687.1 Genbank gene 2530154 2531227 . + . ID=gene-IXO1088_012240;Name=IXO1088_012240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012240 CP040687.1 Protein Homology CDS 2530154 2531227 . + 0 ID=cds-QIE15934.1;Parent=gene-IXO1088_012240;Dbxref=NCBI_GP:QIE15934.1;Name=QIE15934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258952.1;locus_tag=IXO1088_012240;product=replication protein;protein_id=QIE15934.1;transl_table=11 CP040687.1 Genbank gene 2531332 2531631 . + . ID=gene-IXO1088_012245;Name=IXO1088_012245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012245 CP040687.1 Protein Homology CDS 2531332 2531631 . + 0 ID=cds-QIE15935.1;Parent=gene-IXO1088_012245;Dbxref=NCBI_GP:QIE15935.1;Name=QIE15935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408494.1;locus_tag=IXO1088_012245;product=single-stranded DNA-binding protein;protein_id=QIE15935.1;transl_table=11 CP040687.1 Genbank gene 2531995 2532234 . + . ID=gene-IXO1088_012250;Name=IXO1088_012250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012250 CP040687.1 Protein Homology CDS 2531995 2532234 . + 0 ID=cds-QIE15936.1;Parent=gene-IXO1088_012250;Dbxref=NCBI_GP:QIE15936.1;Name=QIE15936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490393.1;locus_tag=IXO1088_012250;product=hypothetical protein;protein_id=QIE15936.1;transl_table=11 CP040687.1 Genbank gene 2532341 2533825 . + . ID=gene-IXO1088_012255;Name=IXO1088_012255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012255 CP040687.1 Protein Homology CDS 2532341 2533825 . + 0 ID=cds-QIE17972.1;Parent=gene-IXO1088_012255;Dbxref=NCBI_GP:QIE17972.1;Name=QIE17972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490395.1;locus_tag=IXO1088_012255;product=hypothetical protein;protein_id=QIE17972.1;transl_table=11 CP040687.1 Genbank gene 2533926 2535245 . + . ID=gene-IXO1088_012260;Name=IXO1088_012260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012260 CP040687.1 Protein Homology CDS 2533926 2535245 . + 0 ID=cds-QIE15937.1;Parent=gene-IXO1088_012260;Dbxref=NCBI_GP:QIE15937.1;Name=QIE15937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_012260;product=IS701 family transposase;protein_id=QIE15937.1;transl_table=11 CP040687.1 Genbank gene 2535346 2535624 . + . ID=gene-IXO1088_012265;Name=IXO1088_012265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012265 CP040687.1 Protein Homology CDS 2535346 2535624 . + 0 ID=cds-QIE15938.1;Parent=gene-IXO1088_012265;Dbxref=NCBI_GP:QIE15938.1;Name=QIE15938.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF10734.7;locus_tag=IXO1088_012265;product=DUF2523 domain-containing protein;protein_id=QIE15938.1;transl_table=11 CP040687.1 Genbank gene 2535621 2536805 . + . ID=gene-IXO1088_012270;Name=IXO1088_012270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012270 CP040687.1 Protein Homology CDS 2535621 2536805 . + 0 ID=cds-QIE15939.1;Parent=gene-IXO1088_012270;Dbxref=NCBI_GP:QIE15939.1;Name=QIE15939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490399.1;locus_tag=IXO1088_012270;product=zonular occludens toxin family protein;protein_id=QIE15939.1;transl_table=11 CP040687.1 Genbank gene 2536860 2537030 . + . ID=gene-IXO1088_012275;Name=IXO1088_012275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012275 CP040687.1 Protein Homology CDS 2536860 2537030 . + 0 ID=cds-QIE15940.1;Parent=gene-IXO1088_012275;Dbxref=NCBI_GP:QIE15940.1;Name=QIE15940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347630.1;locus_tag=IXO1088_012275;product=hypothetical protein;protein_id=QIE15940.1;transl_table=11 CP040687.1 Genbank gene 2537094 2537495 . + . ID=gene-IXO1088_012280;Name=IXO1088_012280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012280 CP040687.1 Protein Homology CDS 2537094 2537495 . + 0 ID=cds-QIE15941.1;Parent=gene-IXO1088_012280;Dbxref=NCBI_GP:QIE15941.1;Name=QIE15941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408498.1;locus_tag=IXO1088_012280;product=DUF4124 domain-containing protein;protein_id=QIE15941.1;transl_table=11 CP040687.1 Genbank gene 2538139 2538399 . - . ID=gene-IXO1088_012285;Name=IXO1088_012285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012285 CP040687.1 Protein Homology CDS 2538139 2538399 . - 0 ID=cds-QIE15942.1;Parent=gene-IXO1088_012285;Dbxref=NCBI_GP:QIE15942.1;Name=QIE15942.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12375.6;locus_tag=IXO1088_012285;product=hypothetical protein;protein_id=QIE15942.1;transl_table=11 CP040687.1 Genbank gene 2538518 2538754 . + . ID=gene-IXO1088_012290;Name=IXO1088_012290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012290 CP040687.1 Protein Homology CDS 2538518 2538754 . + 0 ID=cds-QIE15943.1;Parent=gene-IXO1088_012290;Dbxref=NCBI_GP:QIE15943.1;Name=QIE15943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161474.1;locus_tag=IXO1088_012290;product=hypothetical protein;protein_id=QIE15943.1;transl_table=11 CP040687.1 Genbank gene 2538879 2539061 . - . ID=gene-IXO1088_012295;Name=IXO1088_012295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012295 CP040687.1 Protein Homology CDS 2538879 2539061 . - 0 ID=cds-QIE15944.1;Parent=gene-IXO1088_012295;Dbxref=NCBI_GP:QIE15944.1;Name=QIE15944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408511.1;locus_tag=IXO1088_012295;product=antitoxin;protein_id=QIE15944.1;transl_table=11 CP040687.1 Genbank gene 2539183 2539494 . - . ID=gene-IXO1088_012300;Name=IXO1088_012300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012300 CP040687.1 GeneMarkS-2+ CDS 2539183 2539494 . - 0 ID=cds-QIE15945.1;Parent=gene-IXO1088_012300;Dbxref=NCBI_GP:QIE15945.1;Name=QIE15945.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_012300;product=hypothetical protein;protein_id=QIE15945.1;transl_table=11 CP040687.1 Genbank gene 2539528 2540273 . - . ID=gene-IXO1088_012305;Name=IXO1088_012305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012305 CP040687.1 Protein Homology CDS 2539976 2540273 . - 0 ID=cds-QIE15946.1;Parent=gene-IXO1088_012305;Dbxref=NCBI_GP:QIE15946.1;Name=QIE15946.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_012305;product=IS5 family transposase;protein_id=QIE15946.1;transl_table=11 CP040687.1 Protein Homology CDS 2539528 2539976 . - 2 ID=cds-QIE15946.1;Parent=gene-IXO1088_012305;Dbxref=NCBI_GP:QIE15946.1;Name=QIE15946.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_012305;product=IS5 family transposase;protein_id=QIE15946.1;transl_table=11 CP040687.1 Genbank gene 2540274 2541230 . - . ID=gene-IXO1088_012310;Name=IXO1088_012310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012310 CP040687.1 Protein Homology CDS 2540274 2541230 . - 0 ID=cds-QIE15947.1;Parent=gene-IXO1088_012310;Dbxref=NCBI_GP:QIE15947.1;Name=QIE15947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1088_012310;product=IS30-like element IS1112b family transposase;protein_id=QIE15947.1;transl_table=11 CP040687.1 Genbank gene 2541615 2542340 . + . ID=gene-IXO1088_012315;Name=IXO1088_012315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012315 CP040687.1 Protein Homology CDS 2541615 2542340 . + 0 ID=cds-QIE15948.1;Parent=gene-IXO1088_012315;Dbxref=NCBI_GP:QIE15948.1;Name=QIE15948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019238213.1;locus_tag=IXO1088_012315;product=hypothetical protein;protein_id=QIE15948.1;transl_table=11 CP040687.1 Genbank gene 2542330 2544195 . + . ID=gene-IXO1088_012320;Name=IXO1088_012320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012320 CP040687.1 GeneMarkS-2+ CDS 2542330 2544195 . + 0 ID=cds-QIE15949.1;Parent=gene-IXO1088_012320;Dbxref=NCBI_GP:QIE15949.1;Name=QIE15949.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_012320;product=hypothetical protein;protein_id=QIE15949.1;transl_table=11 CP040687.1 Genbank gene 2544473 2545225 . + . ID=gene-IXO1088_012325;Name=IXO1088_012325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012325 CP040687.1 Protein Homology CDS 2544473 2545225 . + 0 ID=cds-QIE17973.1;Parent=gene-IXO1088_012325;Dbxref=NCBI_GP:QIE17973.1;Name=QIE17973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008214333.1;locus_tag=IXO1088_012325;product=ATP-binding protein;protein_id=QIE17973.1;transl_table=11 CP040687.1 Genbank gene 2545762 2546688 . + . ID=gene-IXO1088_012330;Name=IXO1088_012330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012330 CP040687.1 GeneMarkS-2+ CDS 2545762 2546688 . + 0 ID=cds-QIE15950.1;Parent=gene-IXO1088_012330;Dbxref=NCBI_GP:QIE15950.1;Name=QIE15950.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_012330;product=hypothetical protein;protein_id=QIE15950.1;transl_table=11 CP040687.1 Genbank pseudogene 2546895 2547092 . + . ID=gene-IXO1088_012335;Name=IXO1088_012335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_012335;pseudo=true CP040687.1 Protein Homology CDS 2546895 2547092 . + 0 ID=cds-IXO1088_012335;Parent=gene-IXO1088_012335;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_012335;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2547100 2547279 . + . ID=gene-IXO1088_012340;Name=IXO1088_012340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_012340;pseudo=true CP040687.1 Protein Homology CDS 2547100 2547279 . + 0 ID=cds-IXO1088_012340;Parent=gene-IXO1088_012340;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017354459.1;locus_tag=IXO1088_012340;product=site-specific integrase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2547286 2548172 . - . ID=gene-IXO1088_012345;Name=IXO1088_012345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_012345;pseudo=true CP040687.1 Protein Homology CDS 2547286 2548172 . - 0 ID=cds-IXO1088_012345;Parent=gene-IXO1088_012345;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_012345;product=IS1595 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2548261 2548680 . + . ID=gene-IXO1088_012350;Name=IXO1088_012350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_012350;pseudo=true CP040687.1 Protein Homology CDS 2548261 2548680 . + 0 ID=cds-IXO1088_012350;Parent=gene-IXO1088_012350;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017354459.1;locus_tag=IXO1088_012350;product=phage integrase family protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2548731 2549888 . + . ID=gene-IXO1088_012355;Name=IXO1088_012355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_012355;pseudo=true CP040687.1 Protein Homology CDS 2548731 2549888 . + 0 ID=cds-IXO1088_012355;Parent=gene-IXO1088_012355;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409690.1;locus_tag=IXO1088_012355;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2550108 2553821 . + . ID=gene-IXO1088_012360;Name=IXO1088_012360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012360 CP040687.1 Protein Homology CDS 2550108 2553821 . + 0 ID=cds-QIE15951.1;Parent=gene-IXO1088_012360;Dbxref=NCBI_GP:QIE15951.1;Name=QIE15951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408518.1;locus_tag=IXO1088_012360;product=avirulence protein;protein_id=QIE15951.1;transl_table=11 CP040687.1 Genbank gene 2554090 2554284 . + . ID=gene-IXO1088_012365;Name=IXO1088_012365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012365 CP040687.1 Protein Homology CDS 2554090 2554284 . + 0 ID=cds-QIE15952.1;Parent=gene-IXO1088_012365;Dbxref=NCBI_GP:QIE15952.1;Name=QIE15952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444931.1;locus_tag=IXO1088_012365;product=hypothetical protein;protein_id=QIE15952.1;transl_table=11 CP040687.1 Genbank gene 2554288 2554587 . + . ID=gene-IXO1088_012370;Name=IXO1088_012370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012370 CP040687.1 Protein Homology CDS 2554288 2554587 . + 0 ID=cds-QIE15953.1;Parent=gene-IXO1088_012370;Dbxref=NCBI_GP:QIE15953.1;Name=QIE15953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408930.1;locus_tag=IXO1088_012370;product=hypothetical protein;protein_id=QIE15953.1;transl_table=11 CP040687.1 Genbank gene 2554811 2558668 . + . ID=gene-IXO1088_012375;Name=IXO1088_012375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012375 CP040687.1 Protein Homology CDS 2554811 2558668 . + 0 ID=cds-QIE15954.1;Parent=gene-IXO1088_012375;Dbxref=NCBI_GP:QIE15954.1;Name=QIE15954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408490.1;locus_tag=IXO1088_012375;product=avirulence protein;protein_id=QIE15954.1;transl_table=11 CP040687.1 Genbank pseudogene 2558761 2559084 . - . ID=gene-IXO1088_012380;Name=IXO1088_012380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_012380;pseudo=true CP040687.1 Protein Homology CDS 2558761 2559084 . - 0 ID=cds-IXO1088_012380;Parent=gene-IXO1088_012380;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017168443.1;locus_tag=IXO1088_012380;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2559254 2559874 . - . ID=gene-IXO1088_012385;Name=IXO1088_012385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012385 CP040687.1 Protein Homology CDS 2559254 2559874 . - 0 ID=cds-QIE15955.1;Parent=gene-IXO1088_012385;Dbxref=NCBI_GP:QIE15955.1;Name=QIE15955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507577.1;locus_tag=IXO1088_012385;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=QIE15955.1;transl_table=11 CP040687.1 Genbank gene 2559864 2560640 . - . ID=gene-IXO1088_012390;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=IXO1088_012390 CP040687.1 Protein Homology CDS 2559864 2560640 . - 0 ID=cds-QIE15956.1;Parent=gene-IXO1088_012390;Dbxref=NCBI_GP:QIE15956.1;Name=QIE15956.1;gbkey=CDS;gene=hisF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637179.1;locus_tag=IXO1088_012390;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=QIE15956.1;transl_table=11 CP040687.1 Genbank gene 2560634 2561368 . - . ID=gene-IXO1088_012395;Name=IXO1088_012395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012395 CP040687.1 Protein Homology CDS 2560634 2561368 . - 0 ID=cds-QIE15957.1;Parent=gene-IXO1088_012395;Dbxref=NCBI_GP:QIE15957.1;Name=QIE15957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637178.1;locus_tag=IXO1088_012395;product=1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase;protein_id=QIE15957.1;transl_table=11 CP040687.1 Genbank gene 2561365 2561967 . - . ID=gene-IXO1088_012400;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=IXO1088_012400 CP040687.1 Protein Homology CDS 2561365 2561967 . - 0 ID=cds-QIE15958.1;Parent=gene-IXO1088_012400;Dbxref=NCBI_GP:QIE15958.1;Name=QIE15958.1;gbkey=CDS;gene=hisH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637177.1;locus_tag=IXO1088_012400;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=QIE15958.1;transl_table=11 CP040687.1 Genbank gene 2561964 2563091 . - . ID=gene-IXO1088_012405;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=IXO1088_012405 CP040687.1 Protein Homology CDS 2561964 2563091 . - 0 ID=cds-QIE15959.1;Parent=gene-IXO1088_012405;Dbxref=NCBI_GP:QIE15959.1;Name=QIE15959.1;gbkey=CDS;gene=hisB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637176.1;locus_tag=IXO1088_012405;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=QIE15959.1;transl_table=11 CP040687.1 Genbank gene 2563088 2564179 . - . ID=gene-IXO1088_012410;Name=IXO1088_012410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012410 CP040687.1 Protein Homology CDS 2563088 2564179 . - 0 ID=cds-QIE15960.1;Parent=gene-IXO1088_012410;Dbxref=NCBI_GP:QIE15960.1;Name=QIE15960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010378526.1;locus_tag=IXO1088_012410;product=histidinol-phosphate transaminase;protein_id=QIE15960.1;transl_table=11 CP040687.1 Genbank gene 2564176 2565471 . - . ID=gene-IXO1088_012415;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=IXO1088_012415 CP040687.1 Protein Homology CDS 2564176 2565471 . - 0 ID=cds-QIE15961.1;Parent=gene-IXO1088_012415;Dbxref=NCBI_GP:QIE15961.1;Name=QIE15961.1;gbkey=CDS;gene=hisD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637174.1;locus_tag=IXO1088_012415;product=histidinol dehydrogenase;protein_id=QIE15961.1;transl_table=11 CP040687.1 Genbank gene 2565468 2566382 . - . ID=gene-IXO1088_012420;Name=IXO1088_012420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012420 CP040687.1 Protein Homology CDS 2565468 2566382 . - 0 ID=cds-QIE15962.1;Parent=gene-IXO1088_012420;Dbxref=NCBI_GP:QIE15962.1;Name=QIE15962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637173.1;locus_tag=IXO1088_012420;product=ATP phosphoribosyltransferase;protein_id=QIE15962.1;transl_table=11 CP040687.1 Genbank gene 2566392 2566718 . - . ID=gene-IXO1088_012425;Name=IXO1088_012425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012425 CP040687.1 Protein Homology CDS 2566392 2566718 . - 0 ID=cds-QIE15963.1;Parent=gene-IXO1088_012425;Dbxref=NCBI_GP:QIE15963.1;Name=QIE15963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637172.1;locus_tag=IXO1088_012425;product=DNA-binding transcriptional regulator;protein_id=QIE15963.1;transl_table=11 CP040687.1 Genbank pseudogene 2567032 2567301 . + . ID=gene-IXO1088_012430;Name=IXO1088_012430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_012430;pseudo=true CP040687.1 Protein Homology CDS 2567032 2567301 . + 0 ID=cds-IXO1088_012430;Parent=gene-IXO1088_012430;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_012430;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2567364 2568599 . + . ID=gene-IXO1088_012435;Name=IXO1088_012435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012435 CP040687.1 Protein Homology CDS 2567364 2568599 . + 0 ID=cds-QIE15964.1;Parent=gene-IXO1088_012435;Dbxref=NCBI_GP:QIE15964.1;Name=QIE15964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1088_012435;product=ISL3-like element ISXoo13 family transposase;protein_id=QIE15964.1;transl_table=11 CP040687.1 Genbank pseudogene 2568605 2569150 . + . ID=gene-IXO1088_012440;Name=IXO1088_012440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_012440;pseudo=true CP040687.1 Protein Homology CDS 2568605 2569150 . + 0 ID=cds-IXO1088_012440;Parent=gene-IXO1088_012440;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_012440;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2569166 2569242 . - . ID=gene-IXO1088_012445;Name=IXO1088_012445;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_012445 CP040687.1 cmsearch ncRNA 2569166 2569242 . - . ID=rna-IXO1088_012445;Parent=gene-IXO1088_012445;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_012445;product=sX9 sRNA CP040687.1 cmsearch exon 2569166 2569242 . - . ID=exon-IXO1088_012445-1;Parent=rna-IXO1088_012445;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_012445;product=sX9 sRNA CP040687.1 Genbank gene 2569656 2571068 . - . ID=gene-IXO1088_012450;Name=IXO1088_012450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012450 CP040687.1 Protein Homology CDS 2569656 2571068 . - 0 ID=cds-QIE15965.1;Parent=gene-IXO1088_012450;Dbxref=NCBI_GP:QIE15965.1;Name=QIE15965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155320.1;locus_tag=IXO1088_012450;product=histidine--tRNA ligase;protein_id=QIE15965.1;transl_table=11 CP040687.1 Genbank gene 2571110 2571334 . - . ID=gene-IXO1088_012455;Name=IXO1088_012455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012455 CP040687.1 Protein Homology CDS 2571110 2571334 . - 0 ID=cds-QIE15966.1;Parent=gene-IXO1088_012455;Dbxref=NCBI_GP:QIE15966.1;Name=QIE15966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571435.1;locus_tag=IXO1088_012455;product=hypothetical protein;protein_id=QIE15966.1;transl_table=11 CP040687.1 Genbank pseudogene 2571308 2571934 . + . ID=gene-IXO1088_012460;Name=IXO1088_012460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_012460;pseudo=true CP040687.1 Protein Homology CDS 2571308 2571934 . + 0 ID=cds-IXO1088_012460;Parent=gene-IXO1088_012460;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115239.1;locus_tag=IXO1088_012460;product=cyclic nucleotide-binding domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2572333 2573076 . - . ID=gene-IXO1088_012465;Name=IXO1088_012465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012465 CP040687.1 Protein Homology CDS 2572333 2573076 . - 0 ID=cds-QIE15967.1;Parent=gene-IXO1088_012465;Dbxref=NCBI_GP:QIE15967.1;Name=QIE15967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155322.1;locus_tag=IXO1088_012465;product=murein L%2CD-transpeptidase catalytic domain family protein;protein_id=QIE15967.1;transl_table=11 CP040687.1 Genbank gene 2573179 2574483 . - . ID=gene-IXO1088_012470;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=IXO1088_012470 CP040687.1 Protein Homology CDS 2573179 2574483 . - 0 ID=cds-QIE15968.1;Parent=gene-IXO1088_012470;Dbxref=NCBI_GP:QIE15968.1;Name=QIE15968.1;gbkey=CDS;gene=thrC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915357.1;locus_tag=IXO1088_012470;product=threonine synthase;protein_id=QIE15968.1;transl_table=11 CP040687.1 Genbank gene 2574645 2574959 . + . ID=gene-IXO1088_012475;Name=IXO1088_012475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012475 CP040687.1 Protein Homology CDS 2574645 2574959 . + 0 ID=cds-QIE15969.1;Parent=gene-IXO1088_012475;Dbxref=NCBI_GP:QIE15969.1;Name=QIE15969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155324.1;locus_tag=IXO1088_012475;product=EthD family reductase;protein_id=QIE15969.1;transl_table=11 CP040687.1 Genbank pseudogene 2575683 2577355 . - . ID=gene-IXO1088_012480;Name=IXO1088_012480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_012480;pseudo=true CP040687.1 Protein Homology CDS 2575683 2577355 . - 0 ID=cds-IXO1088_012480;Parent=gene-IXO1088_012480;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165872.1;locus_tag=IXO1088_012480;product=tannase/feruloyl esterase family alpha/beta hydrolase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2577895 2578863 . - . ID=gene-IXO1088_012485;Name=IXO1088_012485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012485 CP040687.1 Protein Homology CDS 2577895 2578863 . - 0 ID=cds-QIE15970.1;Parent=gene-IXO1088_012485;Dbxref=NCBI_GP:QIE15970.1;Name=QIE15970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258933.1;locus_tag=IXO1088_012485;product=homoserine kinase;protein_id=QIE15970.1;transl_table=11 CP040687.1 Genbank gene 2578860 2581367 . - . ID=gene-IXO1088_012490;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=IXO1088_012490 CP040687.1 Protein Homology CDS 2578860 2581367 . - 0 ID=cds-QIE15971.1;Parent=gene-IXO1088_012490;Dbxref=NCBI_GP:QIE15971.1;Name=QIE15971.1;gbkey=CDS;gene=thrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637165.1;locus_tag=IXO1088_012490;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=QIE15971.1;transl_table=11 CP040687.1 Genbank pseudogene 2581960 2582405 . - . ID=gene-IXO1088_012495;Name=IXO1088_012495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_012495;pseudo=true CP040687.1 Protein Homology CDS 2581960 2582405 . - 0 ID=cds-IXO1088_012495;Parent=gene-IXO1088_012495;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115243.1;locus_tag=IXO1088_012495;product=tryptophan-rich sensory protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2582459 2582535 . - . ID=gene-IXO1088_012500;Name=IXO1088_012500;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_012500 CP040687.1 tRNAscan-SE tRNA 2582459 2582535 . - . ID=rna-IXO1088_012500;Parent=gene-IXO1088_012500;anticodon=(pos:complement(2582499..2582501));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_012500;product=tRNA-Arg CP040687.1 tRNAscan-SE exon 2582459 2582535 . - . ID=exon-IXO1088_012500-1;Parent=rna-IXO1088_012500;anticodon=(pos:complement(2582499..2582501));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_012500;product=tRNA-Arg CP040687.1 Genbank gene 2582670 2584202 . + . ID=gene-IXO1088_012505;Name=IXO1088_012505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012505 CP040687.1 Protein Homology CDS 2582670 2584202 . + 0 ID=cds-QIE15972.1;Parent=gene-IXO1088_012505;Dbxref=NCBI_GP:QIE15972.1;Name=QIE15972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507550.1;locus_tag=IXO1088_012505;product=aldehyde dehydrogenase family protein;protein_id=QIE15972.1;transl_table=11 CP040687.1 Genbank pseudogene 2584475 2584555 . + . ID=gene-IXO1088_012510;Name=IXO1088_012510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_012510;pseudo=true CP040687.1 Protein Homology CDS 2584475 2584555 . + 0 ID=cds-IXO1088_012510;Parent=gene-IXO1088_012510;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346878.1;locus_tag=IXO1088_012510;product=DUF885 domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2584791 2585075 . + . ID=gene-IXO1088_012515;Name=IXO1088_012515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012515 CP040687.1 Protein Homology CDS 2584791 2585075 . + 0 ID=cds-QIE17974.1;Parent=gene-IXO1088_012515;Dbxref=NCBI_GP:QIE17974.1;Name=QIE17974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916283.1;locus_tag=IXO1088_012515;product=DUF4190 domain-containing protein;protein_id=QIE17974.1;transl_table=11 CP040687.1 Genbank gene 2585072 2585845 . + . ID=gene-IXO1088_012520;Name=IXO1088_012520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012520 CP040687.1 Protein Homology CDS 2585072 2585845 . + 0 ID=cds-QIE15973.1;Parent=gene-IXO1088_012520;Dbxref=NCBI_GP:QIE15973.1;Name=QIE15973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637155.1;locus_tag=IXO1088_012520;product=class I SAM-dependent methyltransferase;protein_id=QIE15973.1;transl_table=11 CP040687.1 Genbank gene 2585851 2586906 . + . ID=gene-IXO1088_012525;Name=IXO1088_012525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012525 CP040687.1 Protein Homology CDS 2585851 2586906 . + 0 ID=cds-QIE15974.1;Parent=gene-IXO1088_012525;Dbxref=NCBI_GP:QIE15974.1;Name=QIE15974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637154.1;locus_tag=IXO1088_012525;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=QIE15974.1;transl_table=11 CP040687.1 Genbank gene 2586903 2587955 . + . ID=gene-IXO1088_012530;Name=IXO1088_012530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012530 CP040687.1 Protein Homology CDS 2586903 2587955 . + 0 ID=cds-QIE15975.1;Parent=gene-IXO1088_012530;Dbxref=NCBI_GP:QIE15975.1;Name=QIE15975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637153.1;locus_tag=IXO1088_012530;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=QIE15975.1;transl_table=11 CP040687.1 Genbank gene 2587991 2588860 . + . ID=gene-IXO1088_012535;Name=IXO1088_012535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012535 CP040687.1 Protein Homology CDS 2587991 2588860 . + 0 ID=cds-QIE15976.1;Parent=gene-IXO1088_012535;Dbxref=NCBI_GP:QIE15976.1;Name=QIE15976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903106.1;locus_tag=IXO1088_012535;product=DMT family transporter;protein_id=QIE15976.1;transl_table=11 CP040687.1 Genbank gene 2588896 2589054 . + . ID=gene-IXO1088_012540;Name=IXO1088_012540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012540 CP040687.1 Protein Homology CDS 2588896 2589054 . + 0 ID=cds-QIE15977.1;Parent=gene-IXO1088_012540;Dbxref=NCBI_GP:QIE15977.1;Name=QIE15977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503149.1;locus_tag=IXO1088_012540;product=pyridoxal phosphate biosynthetic protein;protein_id=QIE15977.1;transl_table=11 CP040687.1 Genbank gene 2589051 2589185 . + . ID=gene-IXO1088_012545;Name=IXO1088_012545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012545 CP040687.1 Protein Homology CDS 2589051 2589185 . + 0 ID=cds-QIE17975.1;Parent=gene-IXO1088_012545;Dbxref=NCBI_GP:QIE17975.1;Name=QIE17975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300450.1;locus_tag=IXO1088_012545;product=aspartate racemase;protein_id=QIE17975.1;transl_table=11 CP040687.1 Genbank pseudogene 2589161 2589271 . + . ID=gene-IXO1088_012550;Name=IXO1088_012550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_012550;pseudo=true CP040687.1 Protein Homology CDS 2589161 2589271 . + 0 ID=cds-IXO1088_012550;Parent=gene-IXO1088_012550;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924453.1;locus_tag=IXO1088_012550;product=aspartate/glutamate racemase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2589745 2590701 . - . ID=gene-IXO1088_012555;Name=IXO1088_012555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012555 CP040687.1 Protein Homology CDS 2589745 2590701 . - 0 ID=cds-QIE15978.1;Parent=gene-IXO1088_012555;Dbxref=NCBI_GP:QIE15978.1;Name=QIE15978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1088_012555;product=IS30-like element IS1112b family transposase;protein_id=QIE15978.1;transl_table=11 CP040687.1 Genbank gene 2590695 2590886 . + . ID=gene-IXO1088_012560;Name=IXO1088_012560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012560 CP040687.1 Protein Homology CDS 2590695 2590886 . + 0 ID=cds-QIE15979.1;Parent=gene-IXO1088_012560;Dbxref=NCBI_GP:QIE15979.1;Name=QIE15979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259478.1;locus_tag=IXO1088_012560;product=hypothetical protein;protein_id=QIE15979.1;transl_table=11 CP040687.1 Genbank gene 2590799 2591962 . + . ID=gene-IXO1088_012565;Name=IXO1088_012565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012565 CP040687.1 Protein Homology CDS 2590799 2591962 . + 0 ID=cds-QIE17976.1;Parent=gene-IXO1088_012565;Dbxref=NCBI_GP:QIE17976.1;Name=QIE17976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258923.1;locus_tag=IXO1088_012565;product=MHS family MFS transporter;protein_id=QIE17976.1;transl_table=11 CP040687.1 Genbank gene 2591966 2592041 . - . ID=gene-IXO1088_012570;Name=IXO1088_012570;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_012570 CP040687.1 cmsearch ncRNA 2591966 2592041 . - . ID=rna-IXO1088_012570;Parent=gene-IXO1088_012570;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_012570;product=sX9 sRNA CP040687.1 cmsearch exon 2591966 2592041 . - . ID=exon-IXO1088_012570-1;Parent=rna-IXO1088_012570;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_012570;product=sX9 sRNA CP040687.1 Genbank gene 2592103 2592834 . - . ID=gene-IXO1088_012575;Name=IXO1088_012575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012575 CP040687.1 Protein Homology CDS 2592103 2592834 . - 0 ID=cds-QIE15980.1;Parent=gene-IXO1088_012575;Dbxref=NCBI_GP:QIE15980.1;Name=QIE15980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637148.1;locus_tag=IXO1088_012575;product=phosphatase PAP2 family protein;protein_id=QIE15980.1;transl_table=11 CP040687.1 Genbank gene 2592815 2594080 . - . ID=gene-IXO1088_012580;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=IXO1088_012580 CP040687.1 Protein Homology CDS 2592815 2594080 . - 0 ID=cds-QIE15981.1;Parent=gene-IXO1088_012580;Dbxref=NCBI_GP:QIE15981.1;Name=QIE15981.1;gbkey=CDS;gene=ispG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637147.1;locus_tag=IXO1088_012580;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=QIE15981.1;transl_table=11 CP040687.1 Genbank gene 2594198 2595427 . + . ID=gene-IXO1088_012585;Name=IXO1088_012585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012585 CP040687.1 Protein Homology CDS 2594198 2595427 . + 0 ID=cds-QIE15982.1;Parent=gene-IXO1088_012585;Dbxref=NCBI_GP:QIE15982.1;Name=QIE15982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637146.1;locus_tag=IXO1088_012585;product=HAMP domain-containing histidine kinase;protein_id=QIE15982.1;transl_table=11 CP040687.1 Genbank gene 2595424 2595990 . + . ID=gene-IXO1088_012590;Name=IXO1088_012590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012590 CP040687.1 Protein Homology CDS 2595424 2595990 . + 0 ID=cds-QIE15983.1;Parent=gene-IXO1088_012590;Dbxref=NCBI_GP:QIE15983.1;Name=QIE15983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347151.1;locus_tag=IXO1088_012590;product=response regulator transcription factor;protein_id=QIE15983.1;transl_table=11 CP040687.1 Genbank gene 2596042 2597100 . - . ID=gene-IXO1088_012595;Name=IXO1088_012595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012595 CP040687.1 Protein Homology CDS 2596042 2597100 . - 0 ID=cds-QIE15984.1;Parent=gene-IXO1088_012595;Dbxref=NCBI_GP:QIE15984.1;Name=QIE15984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408472.1;locus_tag=IXO1088_012595;product=IS630 family transposase;protein_id=QIE15984.1;transl_table=11 CP040687.1 Genbank gene 2597231 2597307 . + . ID=gene-IXO1088_012600;Name=IXO1088_012600;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_012600 CP040687.1 cmsearch ncRNA 2597231 2597307 . + . ID=rna-IXO1088_012600;Parent=gene-IXO1088_012600;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_012600;product=sX9 sRNA CP040687.1 cmsearch exon 2597231 2597307 . + . ID=exon-IXO1088_012600-1;Parent=rna-IXO1088_012600;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_012600;product=sX9 sRNA CP040687.1 Genbank gene 2597312 2599672 . - . ID=gene-IXO1088_012605;Name=IXO1088_012605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012605 CP040687.1 Protein Homology CDS 2597312 2599672 . - 0 ID=cds-QIE15985.1;Parent=gene-IXO1088_012605;Dbxref=NCBI_GP:QIE15985.1;Name=QIE15985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637510.1;locus_tag=IXO1088_012605;product=RNA-binding transcriptional accessory protein;protein_id=QIE15985.1;transl_table=11 CP040687.1 Genbank gene 2599775 2600002 . - . ID=gene-IXO1088_012610;Name=IXO1088_012610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012610 CP040687.1 Protein Homology CDS 2599775 2600002 . - 0 ID=cds-QIE15986.1;Parent=gene-IXO1088_012610;Dbxref=NCBI_GP:QIE15986.1;Name=QIE15986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802261.1;locus_tag=IXO1088_012610;product=hypothetical protein;protein_id=QIE15986.1;transl_table=11 CP040687.1 Genbank gene 2600189 2601400 . + . ID=gene-IXO1088_012615;Name=IXO1088_012615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012615 CP040687.1 Protein Homology CDS 2600189 2601400 . + 0 ID=cds-QIE15987.1;Parent=gene-IXO1088_012615;Dbxref=NCBI_GP:QIE15987.1;Name=QIE15987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258915.1;locus_tag=IXO1088_012615;product=FAD-binding oxidoreductase;protein_id=QIE15987.1;transl_table=11 CP040687.1 Genbank gene 2601358 2601702 . - . ID=gene-IXO1088_012620;Name=IXO1088_012620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012620 CP040687.1 Protein Homology CDS 2601358 2601702 . - 0 ID=cds-QIE17977.1;Parent=gene-IXO1088_012620;Dbxref=NCBI_GP:QIE17977.1;Name=QIE17977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408470.1;locus_tag=IXO1088_012620;product=hypothetical protein;protein_id=QIE17977.1;transl_table=11 CP040687.1 Genbank gene 2601843 2602040 . - . ID=gene-IXO1088_012625;Name=IXO1088_012625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012625 CP040687.1 Protein Homology CDS 2601843 2602040 . - 0 ID=cds-QIE15988.1;Parent=gene-IXO1088_012625;Dbxref=NCBI_GP:QIE15988.1;Name=QIE15988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637514.1;locus_tag=IXO1088_012625;product=PspC domain-containing protein;protein_id=QIE15988.1;transl_table=11 CP040687.1 Genbank gene 2602155 2603231 . - . ID=gene-IXO1088_012630;Name=IXO1088_012630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012630 CP040687.1 Protein Homology CDS 2602155 2603231 . - 0 ID=cds-QIE15989.1;Parent=gene-IXO1088_012630;Dbxref=NCBI_GP:QIE15989.1;Name=QIE15989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301741.1;locus_tag=IXO1088_012630;product=class III poly(R)-hydroxyalkanoic acid synthase subunit PhaC;protein_id=QIE15989.1;transl_table=11 CP040687.1 Genbank gene 2603228 2604454 . - . ID=gene-IXO1088_012635;Name=phaE;gbkey=Gene;gene=phaE;gene_biotype=protein_coding;locus_tag=IXO1088_012635 CP040687.1 Protein Homology CDS 2603228 2604454 . - 0 ID=cds-QIE15990.1;Parent=gene-IXO1088_012635;Dbxref=NCBI_GP:QIE15990.1;Name=QIE15990.1;gbkey=CDS;gene=phaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463162.1;locus_tag=IXO1088_012635;product=class III poly(R)-hydroxyalkanoic acid synthase subunit PhaE;protein_id=QIE15990.1;transl_table=11 CP040687.1 Genbank gene 2604510 2605106 . - . ID=gene-IXO1088_012640;Name=IXO1088_012640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012640 CP040687.1 Protein Homology CDS 2604510 2605106 . - 0 ID=cds-QIE17978.1;Parent=gene-IXO1088_012640;Dbxref=NCBI_GP:QIE17978.1;Name=QIE17978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637517.1;locus_tag=IXO1088_012640;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=QIE17978.1;transl_table=11 CP040687.1 Genbank gene 2605255 2606013 . + . ID=gene-IXO1088_012645;Name=IXO1088_012645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012645 CP040687.1 Protein Homology CDS 2605255 2606013 . + 0 ID=cds-QIE15991.1;Parent=gene-IXO1088_012645;Dbxref=NCBI_GP:QIE15991.1;Name=QIE15991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637518.1;locus_tag=IXO1088_012645;product=3-hydroxybutyrate dehydrogenase;protein_id=QIE15991.1;transl_table=11 CP040687.1 Genbank gene 2606390 2606878 . - . ID=gene-IXO1088_012650;Name=IXO1088_012650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012650 CP040687.1 Protein Homology CDS 2606390 2606878 . - 0 ID=cds-QIE15992.1;Parent=gene-IXO1088_012650;Dbxref=NCBI_GP:QIE15992.1;Name=QIE15992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637519.1;locus_tag=IXO1088_012650;product=8-oxo-dGTP diphosphatase;protein_id=QIE15992.1;transl_table=11 CP040687.1 Genbank gene 2606963 2607472 . - . ID=gene-IXO1088_012655;Name=IXO1088_012655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012655 CP040687.1 Protein Homology CDS 2606963 2607472 . - 0 ID=cds-QIE15993.1;Parent=gene-IXO1088_012655;Dbxref=NCBI_GP:QIE15993.1;Name=QIE15993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157557.1;locus_tag=IXO1088_012655;product=DUF1249 domain-containing protein;protein_id=QIE15993.1;transl_table=11 CP040687.1 Genbank gene 2607678 2608499 . - . ID=gene-IXO1088_012660;Name=IXO1088_012660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012660 CP040687.1 Protein Homology CDS 2607678 2608499 . - 0 ID=cds-QIE15994.1;Parent=gene-IXO1088_012660;Dbxref=NCBI_GP:QIE15994.1;Name=QIE15994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637521.1;locus_tag=IXO1088_012660;product=kinase/pyrophosphorylase;protein_id=QIE15994.1;transl_table=11 CP040687.1 Genbank gene 2608642 2611035 . + . ID=gene-IXO1088_012665;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=IXO1088_012665 CP040687.1 Protein Homology CDS 2608642 2611035 . + 0 ID=cds-QIE15995.1;Parent=gene-IXO1088_012665;Dbxref=NCBI_GP:QIE15995.1;Name=QIE15995.1;gbkey=CDS;gene=ppsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118687.1;locus_tag=IXO1088_012665;product=phosphoenolpyruvate synthase;protein_id=QIE15995.1;transl_table=11 CP040687.1 Genbank gene 2611035 2612021 . + . ID=gene-IXO1088_012670;Name=IXO1088_012670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012670 CP040687.1 Protein Homology CDS 2611035 2612021 . + 0 ID=cds-QIE15996.1;Parent=gene-IXO1088_012670;Dbxref=NCBI_GP:QIE15996.1;Name=QIE15996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637523.1;locus_tag=IXO1088_012670;product=mechanosensitive ion channel;protein_id=QIE15996.1;transl_table=11 CP040687.1 Genbank gene 2612233 2612817 . - . ID=gene-IXO1088_012675;Name=IXO1088_012675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012675 CP040687.1 Protein Homology CDS 2612233 2612817 . - 0 ID=cds-QIE15997.1;Parent=gene-IXO1088_012675;Dbxref=NCBI_GP:QIE15997.1;Name=QIE15997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373214.1;locus_tag=IXO1088_012675;product=oligoribonuclease;protein_id=QIE15997.1;transl_table=11 CP040687.1 Genbank gene 2612890 2613402 . - . ID=gene-IXO1088_012680;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=IXO1088_012680 CP040687.1 Protein Homology CDS 2612890 2613402 . - 0 ID=cds-QIE15998.1;Parent=gene-IXO1088_012680;Dbxref=NCBI_GP:QIE15998.1;Name=QIE15998.1;gbkey=CDS;gene=tadA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008577150.1;locus_tag=IXO1088_012680;product=tRNA adenosine(34) deaminase TadA;protein_id=QIE15998.1;transl_table=11 CP040687.1 Genbank gene 2613399 2613866 . - . ID=gene-IXO1088_012685;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=IXO1088_012685 CP040687.1 Protein Homology CDS 2613399 2613866 . - 0 ID=cds-QIE15999.1;Parent=gene-IXO1088_012685;Dbxref=NCBI_GP:QIE15999.1;Name=QIE15999.1;gbkey=CDS;gene=mntR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915725.1;locus_tag=IXO1088_012685;product=manganese-binding transcriptional regulator MntR;protein_id=QIE15999.1;transl_table=11 CP040687.1 Genbank gene 2614010 2615344 . + . ID=gene-IXO1088_012690;Name=IXO1088_012690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012690 CP040687.1 Protein Homology CDS 2614010 2615344 . + 0 ID=cds-QIE16000.1;Parent=gene-IXO1088_012690;Dbxref=NCBI_GP:QIE16000.1;Name=QIE16000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051299.1;locus_tag=IXO1088_012690;product=divalent metal cation transporter;protein_id=QIE16000.1;transl_table=11 CP040687.1 Genbank pseudogene 2615366 2615589 . - . ID=gene-IXO1088_012695;Name=IXO1088_012695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_012695;pseudo=true CP040687.1 Protein Homology CDS 2615366 2615589 . - 0 ID=cds-IXO1088_012695;Parent=gene-IXO1088_012695;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113575.1;locus_tag=IXO1088_012695;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2615640 2617532 . + . ID=gene-IXO1088_012700;Name=IXO1088_012700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012700 CP040687.1 Protein Homology CDS 2615640 2617532 . + 0 ID=cds-QIE16001.1;Parent=gene-IXO1088_012700;Dbxref=NCBI_GP:QIE16001.1;Name=QIE16001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258899.1;locus_tag=IXO1088_012700;product=response regulator;protein_id=QIE16001.1;transl_table=11 CP040687.1 Genbank gene 2617575 2618180 . + . ID=gene-IXO1088_012705;Name=IXO1088_012705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012705 CP040687.1 Protein Homology CDS 2617575 2618180 . + 0 ID=cds-QIE16002.1;Parent=gene-IXO1088_012705;Dbxref=NCBI_GP:QIE16002.1;Name=QIE16002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637538.1;locus_tag=IXO1088_012705;product=hypothetical protein;protein_id=QIE16002.1;transl_table=11 CP040687.1 Genbank pseudogene 2618376 2619299 . - . ID=gene-IXO1088_012710;Name=IXO1088_012710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_012710;pseudo=true CP040687.1 Protein Homology CDS 2618376 2619299 . - 0 ID=cds-IXO1088_012710;Parent=gene-IXO1088_012710;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408458.1;locus_tag=IXO1088_012710;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2619385 2620518 . + . ID=gene-IXO1088_012715;Name=IXO1088_012715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012715 CP040687.1 Protein Homology CDS 2619385 2620518 . + 0 ID=cds-QIE16003.1;Parent=gene-IXO1088_012715;Dbxref=NCBI_GP:QIE16003.1;Name=QIE16003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258895.1;locus_tag=IXO1088_012715;product=YeiH family putative sulfate export transporter;protein_id=QIE16003.1;transl_table=11 CP040687.1 Genbank gene 2620546 2620839 . - . ID=gene-IXO1088_012720;Name=IXO1088_012720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012720 CP040687.1 Protein Homology CDS 2620546 2620839 . - 0 ID=cds-QIE16004.1;Parent=gene-IXO1088_012720;Dbxref=NCBI_GP:QIE16004.1;Name=QIE16004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503564.1;locus_tag=IXO1088_012720;product=hypothetical protein;protein_id=QIE16004.1;transl_table=11 CP040687.1 Genbank pseudogene 2621074 2621376 . - . ID=gene-IXO1088_012725;Name=IXO1088_012725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_012725;pseudo=true CP040687.1 Protein Homology CDS 2621074 2621376 . - 0 ID=cds-IXO1088_012725;Parent=gene-IXO1088_012725;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373170.1;locus_tag=IXO1088_012725;product=SDR family oxidoreductase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2621379 2621458 . - . ID=gene-IXO1088_012730;Name=IXO1088_012730;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_012730 CP040687.1 cmsearch ncRNA 2621379 2621458 . - . ID=rna-IXO1088_012730;Parent=gene-IXO1088_012730;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_012730;product=sX9 sRNA CP040687.1 cmsearch exon 2621379 2621458 . - . ID=exon-IXO1088_012730-1;Parent=rna-IXO1088_012730;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_012730;product=sX9 sRNA CP040687.1 Genbank gene 2621442 2621516 . + . ID=gene-IXO1088_012735;Name=IXO1088_012735;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_012735 CP040687.1 cmsearch ncRNA 2621442 2621516 . + . ID=rna-IXO1088_012735;Parent=gene-IXO1088_012735;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_012735;product=sX9 sRNA CP040687.1 cmsearch exon 2621442 2621516 . + . ID=exon-IXO1088_012735-1;Parent=rna-IXO1088_012735;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_012735;product=sX9 sRNA CP040687.1 Genbank gene 2621562 2622452 . - . ID=gene-IXO1088_012740;Name=IXO1088_012740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012740 CP040687.1 Protein Homology CDS 2621562 2622452 . - 0 ID=cds-QIE16005.1;Parent=gene-IXO1088_012740;Dbxref=NCBI_GP:QIE16005.1;Name=QIE16005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373162.1;locus_tag=IXO1088_012740;product=LysR family transcriptional regulator;protein_id=QIE16005.1;transl_table=11 CP040687.1 Genbank gene 2622562 2624133 . + . ID=gene-IXO1088_012745;Name=IXO1088_012745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012745 CP040687.1 Protein Homology CDS 2622562 2624133 . + 0 ID=cds-QIE16006.1;Parent=gene-IXO1088_012745;Dbxref=NCBI_GP:QIE16006.1;Name=QIE16006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160334.1;locus_tag=IXO1088_012745;product=oxidoreductase;protein_id=QIE16006.1;transl_table=11 CP040687.1 Genbank gene 2624156 2626594 . + . ID=gene-IXO1088_012750;Name=IXO1088_012750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012750 CP040687.1 Protein Homology CDS 2624156 2626594 . + 0 ID=cds-QIE16007.1;Parent=gene-IXO1088_012750;Dbxref=NCBI_GP:QIE16007.1;Name=QIE16007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182108.1;locus_tag=IXO1088_012750;product=DUF2309 domain-containing protein;protein_id=QIE16007.1;transl_table=11 CP040687.1 Genbank gene 2626739 2628304 . - . ID=gene-IXO1088_012755;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=IXO1088_012755 CP040687.1 Protein Homology CDS 2626739 2628304 . - 0 ID=cds-QIE16008.1;Parent=gene-IXO1088_012755;Dbxref=NCBI_GP:QIE16008.1;Name=QIE16008.1;gbkey=CDS;gene=guaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012510808.1;locus_tag=IXO1088_012755;product=glutamine-hydrolyzing GMP synthase;protein_id=QIE16008.1;transl_table=11 CP040687.1 Genbank gene 2628431 2629888 . - . ID=gene-IXO1088_012760;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=IXO1088_012760 CP040687.1 Protein Homology CDS 2628431 2629888 . - 0 ID=cds-QIE16009.1;Parent=gene-IXO1088_012760;Dbxref=NCBI_GP:QIE16009.1;Name=QIE16009.1;gbkey=CDS;gene=guaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637540.1;locus_tag=IXO1088_012760;product=IMP dehydrogenase;protein_id=QIE16009.1;transl_table=11 CP040687.1 Genbank gene 2630077 2630988 . - . ID=gene-IXO1088_012765;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=IXO1088_012765 CP040687.1 Protein Homology CDS 2630077 2630988 . - 0 ID=cds-QIE16010.1;Parent=gene-IXO1088_012765;Dbxref=NCBI_GP:QIE16010.1;Name=QIE16010.1;gbkey=CDS;gene=folD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157588.1;locus_tag=IXO1088_012765;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=QIE16010.1;transl_table=11 CP040687.1 Genbank gene 2631038 2631358 . + . ID=gene-IXO1088_012770;Name=IXO1088_012770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012770 CP040687.1 Protein Homology CDS 2631038 2631358 . + 0 ID=cds-QIE16011.1;Parent=gene-IXO1088_012770;Dbxref=NCBI_GP:QIE16011.1;Name=QIE16011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637542.1;locus_tag=IXO1088_012770;product=DUF1244 domain-containing protein;protein_id=QIE16011.1;transl_table=11 CP040687.1 Genbank pseudogene 2631651 2633026 . + . ID=gene-IXO1088_012775;Name=IXO1088_012775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_012775;pseudo=true CP040687.1 Protein Homology CDS 2631651 2633026 . + 0 ID=cds-IXO1088_012775;Parent=gene-IXO1088_012775;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=IXO1088_012775;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2633205 2635025 . - . ID=gene-IXO1088_012780;Name=IXO1088_012780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_012780;pseudo=true CP040687.1 Protein Homology CDS 2633205 2635025 . - 0 ID=cds-IXO1088_012780;Parent=gene-IXO1088_012780;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637543.1;locus_tag=IXO1088_012780;product=potassium transporter;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2635198 2636091 . - . ID=gene-IXO1088_012785;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=IXO1088_012785 CP040687.1 Protein Homology CDS 2635198 2636091 . - 0 ID=cds-QIE16012.1;Parent=gene-IXO1088_012785;Dbxref=NCBI_GP:QIE16012.1;Name=QIE16012.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637544.1;locus_tag=IXO1088_012785;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=QIE16012.1;transl_table=11 CP040687.1 Genbank gene 2636091 2637929 . - . ID=gene-IXO1088_012790;Name=IXO1088_012790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012790 CP040687.1 Protein Homology CDS 2636091 2637929 . - 0 ID=cds-QIE17979.1;Parent=gene-IXO1088_012790;Dbxref=NCBI_GP:QIE17979.1;Name=QIE17979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637545.1;locus_tag=IXO1088_012790;product=polysaccharide biosynthesis protein;protein_id=QIE17979.1;transl_table=11 CP040687.1 Genbank gene 2638012 2638980 . - . ID=gene-IXO1088_012795;Name=IXO1088_012795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012795 CP040687.1 Protein Homology CDS 2638012 2638980 . - 0 ID=cds-QIE16013.1;Parent=gene-IXO1088_012795;Dbxref=NCBI_GP:QIE16013.1;Name=QIE16013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489645.1;locus_tag=IXO1088_012795;product=glycosyltransferase family 4 protein;protein_id=QIE16013.1;transl_table=11 CP040687.1 Genbank gene 2638980 2640158 . - . ID=gene-IXO1088_012800;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=IXO1088_012800 CP040687.1 Protein Homology CDS 2638980 2640158 . - 0 ID=cds-QIE16014.1;Parent=gene-IXO1088_012800;Dbxref=NCBI_GP:QIE16014.1;Name=QIE16014.1;gbkey=CDS;gene=lapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637547.1;locus_tag=IXO1088_012800;product=lipopolysaccharide assembly protein LapB;protein_id=QIE16014.1;transl_table=11 CP040687.1 Genbank gene 2640165 2640470 . - . ID=gene-IXO1088_012805;Name=IXO1088_012805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012805 CP040687.1 Protein Homology CDS 2640165 2640470 . - 0 ID=cds-QIE16015.1;Parent=gene-IXO1088_012805;Dbxref=NCBI_GP:QIE16015.1;Name=QIE16015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637548.1;locus_tag=IXO1088_012805;product=LapA family protein;protein_id=QIE16015.1;transl_table=11 CP040687.1 Genbank gene 2640538 2640849 . - . ID=gene-IXO1088_012810;Name=IXO1088_012810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012810 CP040687.1 Protein Homology CDS 2640538 2640849 . - 0 ID=cds-QIE16016.1;Parent=gene-IXO1088_012810;Dbxref=NCBI_GP:QIE16016.1;Name=QIE16016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637549.1;locus_tag=IXO1088_012810;product=integration host factor subunit beta;protein_id=QIE16016.1;transl_table=11 CP040687.1 Genbank gene 2640938 2642623 . - . ID=gene-IXO1088_012815;Name=IXO1088_012815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012815 CP040687.1 Protein Homology CDS 2640938 2642623 . - 0 ID=cds-QIE16017.1;Parent=gene-IXO1088_012815;Dbxref=NCBI_GP:QIE16017.1;Name=QIE16017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637550.1;locus_tag=IXO1088_012815;product=30S ribosomal protein S1;protein_id=QIE16017.1;transl_table=11 CP040687.1 Genbank gene 2642807 2643490 . - . ID=gene-IXO1088_012820;Name=IXO1088_012820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012820 CP040687.1 Protein Homology CDS 2642807 2643490 . - 0 ID=cds-QIE16018.1;Parent=gene-IXO1088_012820;Dbxref=NCBI_GP:QIE16018.1;Name=QIE16018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258877.1;locus_tag=IXO1088_012820;product=(d)CMP kinase;protein_id=QIE16018.1;transl_table=11 CP040687.1 Genbank gene 2643663 2643788 . + . ID=gene-IXO1088_012825;Name=IXO1088_012825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012825 CP040687.1 Protein Homology CDS 2643663 2643788 . + 0 ID=cds-QIE16019.1;Parent=gene-IXO1088_012825;Dbxref=NCBI_GP:QIE16019.1;Name=QIE16019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098120.1;locus_tag=IXO1088_012825;product=50S ribosomal protein L36;protein_id=QIE16019.1;transl_table=11 CP040687.1 Genbank gene 2644055 2644396 . + . ID=gene-IXO1088_012830;Name=IXO1088_012830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012830 CP040687.1 Protein Homology CDS 2644055 2644396 . + 0 ID=cds-QIE16020.1;Parent=gene-IXO1088_012830;Dbxref=NCBI_GP:QIE16020.1;Name=QIE16020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637553.1;locus_tag=IXO1088_012830;product=hypothetical protein;protein_id=QIE16020.1;transl_table=11 CP040687.1 Genbank gene 2644624 2645667 . + . ID=gene-IXO1088_012835;Name=IXO1088_012835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012835 CP040687.1 Protein Homology CDS 2644624 2645667 . + 0 ID=cds-QIE16021.1;Parent=gene-IXO1088_012835;Dbxref=NCBI_GP:QIE16021.1;Name=QIE16021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258875.1;locus_tag=IXO1088_012835;product=agmatine deiminase family protein;protein_id=QIE16021.1;transl_table=11 CP040687.1 Genbank gene 2645729 2645805 . + . ID=gene-IXO1088_012840;Name=IXO1088_012840;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_012840 CP040687.1 cmsearch ncRNA 2645729 2645805 . + . ID=rna-IXO1088_012840;Parent=gene-IXO1088_012840;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_012840;product=sX9 sRNA CP040687.1 cmsearch exon 2645729 2645805 . + . ID=exon-IXO1088_012840-1;Parent=rna-IXO1088_012840;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_012840;product=sX9 sRNA CP040687.1 Genbank gene 2645937 2646821 . + . ID=gene-IXO1088_012845;Name=IXO1088_012845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012845 CP040687.1 Protein Homology CDS 2645937 2646821 . + 0 ID=cds-QIE16022.1;Parent=gene-IXO1088_012845;Dbxref=NCBI_GP:QIE16022.1;Name=QIE16022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637555.1;locus_tag=IXO1088_012845;product=carbon-nitrogen hydrolase;protein_id=QIE16022.1;transl_table=11 CP040687.1 Genbank pseudogene 2646826 2647360 . + . ID=gene-IXO1088_012850;Name=IXO1088_012850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_012850;pseudo=true CP040687.1 Protein Homology CDS 2646826 2647360 . + 0 ID=cds-IXO1088_012850;Parent=gene-IXO1088_012850;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258873.1;locus_tag=IXO1088_012850;product=N-acetyltransferase family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2647357 2648577 . + . ID=gene-IXO1088_012855;Name=IXO1088_012855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012855 CP040687.1 Protein Homology CDS 2647357 2648577 . + 0 ID=cds-QIE16023.1;Parent=gene-IXO1088_012855;Dbxref=NCBI_GP:QIE16023.1;Name=QIE16023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237613.1;locus_tag=IXO1088_012855;product=TraB/GumN family protein;protein_id=QIE16023.1;transl_table=11 CP040687.1 Genbank pseudogene 2648583 2648969 . - . ID=gene-IXO1088_012860;Name=IXO1088_012860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_012860;pseudo=true CP040687.1 Protein Homology CDS 2648583 2648969 . - 0 ID=cds-IXO1088_012860;Parent=gene-IXO1088_012860;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010382183.1;locus_tag=IXO1088_012860;product=endonuclease/exonuclease/phosphatase family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2649041 2652205 . - . ID=gene-IXO1088_012865;Name=IXO1088_012865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012865 CP040687.1 Protein Homology CDS 2649041 2652205 . - 0 ID=cds-QIE16024.1;Parent=gene-IXO1088_012865;Dbxref=NCBI_GP:QIE16024.1;Name=QIE16024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637559.1;locus_tag=IXO1088_012865;product=coagulation factor 5/8 type domain-containing protein;protein_id=QIE16024.1;transl_table=11 CP040687.1 Genbank gene 2652202 2653038 . - . ID=gene-IXO1088_012870;Name=IXO1088_012870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012870 CP040687.1 Protein Homology CDS 2652202 2653038 . - 0 ID=cds-QIE16025.1;Parent=gene-IXO1088_012870;Dbxref=NCBI_GP:QIE16025.1;Name=QIE16025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637560.1;locus_tag=IXO1088_012870;product=carbohydrate ABC transporter permease;protein_id=QIE16025.1;transl_table=11 CP040687.1 Genbank gene 2653035 2653919 . - . ID=gene-IXO1088_012875;Name=IXO1088_012875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012875 CP040687.1 Protein Homology CDS 2653035 2653919 . - 0 ID=cds-QIE16026.1;Parent=gene-IXO1088_012875;Dbxref=NCBI_GP:QIE16026.1;Name=QIE16026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637561.1;locus_tag=IXO1088_012875;product=sugar ABC transporter permease;protein_id=QIE16026.1;transl_table=11 CP040687.1 Genbank gene 2653916 2655286 . - . ID=gene-IXO1088_012880;Name=IXO1088_012880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012880 CP040687.1 Protein Homology CDS 2653916 2655286 . - 0 ID=cds-QIE16027.1;Parent=gene-IXO1088_012880;Dbxref=NCBI_GP:QIE16027.1;Name=QIE16027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157813.1;locus_tag=IXO1088_012880;product=extracellular solute-binding protein;protein_id=QIE16027.1;transl_table=11 CP040687.1 Genbank gene 2655290 2656909 . - . ID=gene-IXO1088_012885;Name=IXO1088_012885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012885 CP040687.1 Protein Homology CDS 2655290 2656909 . - 0 ID=cds-QIE16028.1;Parent=gene-IXO1088_012885;Dbxref=NCBI_GP:QIE16028.1;Name=QIE16028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258867.1;locus_tag=IXO1088_012885;product=hypothetical protein;protein_id=QIE16028.1;transl_table=11 CP040687.1 Genbank pseudogene 2657012 2657803 . - . ID=gene-IXO1088_012890;Name=IXO1088_012890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_012890;pseudo=true CP040687.1 Protein Homology CDS 2657012 2657803 . - 0 ID=cds-IXO1088_012890;Parent=gene-IXO1088_012890;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637564.1;locus_tag=IXO1088_012890;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2657892 2658848 . + . ID=gene-IXO1088_012895;Name=IXO1088_012895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012895 CP040687.1 Protein Homology CDS 2657892 2658848 . + 0 ID=cds-QIE16029.1;Parent=gene-IXO1088_012895;Dbxref=NCBI_GP:QIE16029.1;Name=QIE16029.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033563.0;locus_tag=IXO1088_012895;product=IS30-like element IS1112a family transposase;protein_id=QIE16029.1;transl_table=11 CP040687.1 Genbank pseudogene 2658856 2661048 . - . ID=gene-IXO1088_012900;Name=IXO1088_012900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_012900;pseudo=true CP040687.1 Protein Homology CDS 2658856 2661048 . - 0 ID=cds-IXO1088_012900;Parent=gene-IXO1088_012900;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017909686.1;locus_tag=IXO1088_012900;product=TonB-dependent receptor;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2661184 2662202 . - . ID=gene-IXO1088_012905;Name=IXO1088_012905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_012905;pseudo=true CP040687.1 Protein Homology CDS 2661184 2662202 . - 0 ID=cds-IXO1088_012905;Parent=gene-IXO1088_012905;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115157.1;locus_tag=IXO1088_012905;product=LacI family transcriptional regulator;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2662769 2663092 . - . ID=gene-IXO1088_012910;Name=IXO1088_012910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012910 CP040687.1 Protein Homology CDS 2662769 2663092 . - 0 ID=cds-QIE16030.1;Parent=gene-IXO1088_012910;Dbxref=NCBI_GP:QIE16030.1;Name=QIE16030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408437.1;locus_tag=IXO1088_012910;product=BolA family transcriptional regulator;protein_id=QIE16030.1;transl_table=11 CP040687.1 Genbank gene 2663089 2663388 . - . ID=gene-IXO1088_012915;Name=IXO1088_012915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012915 CP040687.1 Protein Homology CDS 2663089 2663388 . - 0 ID=cds-QIE16031.1;Parent=gene-IXO1088_012915;Dbxref=NCBI_GP:QIE16031.1;Name=QIE16031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637567.1;locus_tag=IXO1088_012915;product=YciI family protein;protein_id=QIE16031.1;transl_table=11 CP040687.1 Genbank gene 2663740 2664645 . + . ID=gene-IXO1088_012920;Name=IXO1088_012920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012920 CP040687.1 Protein Homology CDS 2663740 2664645 . + 0 ID=cds-QIE16032.1;Parent=gene-IXO1088_012920;Dbxref=NCBI_GP:QIE16032.1;Name=QIE16032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090322.1;locus_tag=IXO1088_012920;product=segregation/condensation protein A;protein_id=QIE16032.1;transl_table=11 CP040687.1 Genbank gene 2664584 2665858 . + . ID=gene-IXO1088_012925;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=IXO1088_012925 CP040687.1 Protein Homology CDS 2664584 2665858 . + 0 ID=cds-QIE16033.1;Parent=gene-IXO1088_012925;Dbxref=NCBI_GP:QIE16033.1;Name=QIE16033.1;gbkey=CDS;gene=scpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637569.1;locus_tag=IXO1088_012925;product=SMC-Scp complex subunit ScpB;protein_id=QIE16033.1;transl_table=11 CP040687.1 Genbank gene 2665851 2667491 . + . ID=gene-IXO1088_012930;Name=IXO1088_012930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012930 CP040687.1 Protein Homology CDS 2665851 2667491 . + 0 ID=cds-QIE16034.1;Parent=gene-IXO1088_012930;Dbxref=NCBI_GP:QIE16034.1;Name=QIE16034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163786.1;locus_tag=IXO1088_012930;product=pseudouridine synthase;protein_id=QIE16034.1;transl_table=11 CP040687.1 Genbank gene 2667701 2668138 . - . ID=gene-IXO1088_012935;Name=IXO1088_012935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012935 CP040687.1 Protein Homology CDS 2667701 2668138 . - 0 ID=cds-QIE16035.1;Parent=gene-IXO1088_012935;Dbxref=NCBI_GP:QIE16035.1;Name=QIE16035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637571.1;locus_tag=IXO1088_012935;product=hypothetical protein;protein_id=QIE16035.1;transl_table=11 CP040687.1 Genbank gene 2668254 2669072 . + . ID=gene-IXO1088_012940;Name=IXO1088_012940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012940 CP040687.1 Protein Homology CDS 2668254 2669072 . + 0 ID=cds-QIE16036.1;Parent=gene-IXO1088_012940;Dbxref=NCBI_GP:QIE16036.1;Name=QIE16036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913158.1;locus_tag=IXO1088_012940;product=glutaminyl-peptide cyclotransferase;protein_id=QIE16036.1;transl_table=11 CP040687.1 Genbank gene 2669235 2670200 . + . ID=gene-IXO1088_012945;Name=IXO1088_012945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012945 CP040687.1 Protein Homology CDS 2669235 2670200 . + 0 ID=cds-QIE16037.1;Parent=gene-IXO1088_012945;Dbxref=NCBI_GP:QIE16037.1;Name=QIE16037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_012945;product=IS1595-like element ISXo5 family transposase;protein_id=QIE16037.1;transl_table=11 CP040687.1 Genbank gene 2670221 2671024 . - . ID=gene-IXO1088_012950;Name=IXO1088_012950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012950 CP040687.1 Protein Homology CDS 2670221 2671024 . - 0 ID=cds-QIE16038.1;Parent=gene-IXO1088_012950;Dbxref=NCBI_GP:QIE16038.1;Name=QIE16038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300016.1;locus_tag=IXO1088_012950;product=amidohydrolase;protein_id=QIE16038.1;transl_table=11 CP040687.1 Genbank gene 2671164 2672312 . - . ID=gene-IXO1088_012955;Name=IXO1088_012955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012955 CP040687.1 Protein Homology CDS 2671164 2672312 . - 0 ID=cds-QIE16039.1;Parent=gene-IXO1088_012955;Dbxref=NCBI_GP:QIE16039.1;Name=QIE16039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637574.1;locus_tag=IXO1088_012955;product=pyridoxal phosphate-dependent aminotransferase;protein_id=QIE16039.1;transl_table=11 CP040687.1 Genbank gene 2672539 2673183 . + . ID=gene-IXO1088_012960;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=IXO1088_012960 CP040687.1 Protein Homology CDS 2672539 2673183 . + 0 ID=cds-QIE16040.1;Parent=gene-IXO1088_012960;Dbxref=NCBI_GP:QIE16040.1;Name=QIE16040.1;gbkey=CDS;gene=ccmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637575.1;locus_tag=IXO1088_012960;product=heme ABC exporter ATP-binding protein CcmA;protein_id=QIE16040.1;transl_table=11 CP040687.1 Genbank gene 2673180 2673875 . + . ID=gene-IXO1088_012965;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=IXO1088_012965 CP040687.1 Protein Homology CDS 2673180 2673875 . + 0 ID=cds-QIE16041.1;Parent=gene-IXO1088_012965;Dbxref=NCBI_GP:QIE16041.1;Name=QIE16041.1;gbkey=CDS;gene=ccmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637576.1;locus_tag=IXO1088_012965;product=heme exporter protein CcmB;protein_id=QIE16041.1;transl_table=11 CP040687.1 Genbank gene 2673970 2674722 . + . ID=gene-IXO1088_012970;Name=IXO1088_012970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012970 CP040687.1 Protein Homology CDS 2673970 2674722 . + 0 ID=cds-QIE16042.1;Parent=gene-IXO1088_012970;Dbxref=NCBI_GP:QIE16042.1;Name=QIE16042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904032.1;locus_tag=IXO1088_012970;product=heme ABC transporter permease;protein_id=QIE16042.1;transl_table=11 CP040687.1 Genbank gene 2674719 2674889 . + . ID=gene-IXO1088_012975;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=IXO1088_012975 CP040687.1 Protein Homology CDS 2674719 2674889 . + 0 ID=cds-QIE16043.1;Parent=gene-IXO1088_012975;Dbxref=NCBI_GP:QIE16043.1;Name=QIE16043.1;gbkey=CDS;gene=ccmD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637578.1;locus_tag=IXO1088_012975;product=heme exporter protein CcmD;protein_id=QIE16043.1;transl_table=11 CP040687.1 Genbank gene 2674886 2675356 . + . ID=gene-IXO1088_012980;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=IXO1088_012980 CP040687.1 Protein Homology CDS 2674886 2675356 . + 0 ID=cds-QIE16044.1;Parent=gene-IXO1088_012980;Dbxref=NCBI_GP:QIE16044.1;Name=QIE16044.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503607.1;locus_tag=IXO1088_012980;product=cytochrome c maturation protein CcmE;protein_id=QIE16044.1;transl_table=11 CP040687.1 Genbank gene 2675525 2677462 . + . ID=gene-IXO1088_012985;Name=IXO1088_012985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012985 CP040687.1 Protein Homology CDS 2675525 2677462 . + 0 ID=cds-QIE16045.1;Parent=gene-IXO1088_012985;Dbxref=NCBI_GP:QIE16045.1;Name=QIE16045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171666.1;locus_tag=IXO1088_012985;product=heme lyase CcmF/NrfE family subunit;protein_id=QIE16045.1;transl_table=11 CP040687.1 Genbank gene 2677455 2678057 . + . ID=gene-IXO1088_012990;Name=IXO1088_012990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012990 CP040687.1 Protein Homology CDS 2677455 2678057 . + 0 ID=cds-QIE16046.1;Parent=gene-IXO1088_012990;Dbxref=NCBI_GP:QIE16046.1;Name=QIE16046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637581.1;locus_tag=IXO1088_012990;product=DsbE family thiol:disulfide interchange protein;protein_id=QIE16046.1;transl_table=11 CP040687.1 Genbank gene 2678075 2678485 . + . ID=gene-IXO1088_012995;Name=IXO1088_012995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_012995 CP040687.1 Protein Homology CDS 2678075 2678485 . + 0 ID=cds-QIE17980.1;Parent=gene-IXO1088_012995;Dbxref=NCBI_GP:QIE17980.1;Name=QIE17980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637582.1;locus_tag=IXO1088_012995;product=cytochrome c-type biogenesis protein CcmH;protein_id=QIE17980.1;transl_table=11 CP040687.1 Genbank gene 2678479 2679498 . + . ID=gene-IXO1088_013000;Name=IXO1088_013000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013000 CP040687.1 Protein Homology CDS 2678479 2679498 . + 0 ID=cds-QIE16047.1;Parent=gene-IXO1088_013000;Dbxref=NCBI_GP:QIE16047.1;Name=QIE16047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637583.1;locus_tag=IXO1088_013000;product=tetratricopeptide repeat protein;protein_id=QIE16047.1;transl_table=11 CP040687.1 Genbank pseudogene 2679631 2679807 . - . ID=gene-IXO1088_013005;Name=IXO1088_013005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_013005;pseudo=true CP040687.1 Protein Homology CDS 2679631 2679807 . - 0 ID=cds-IXO1088_013005;Parent=gene-IXO1088_013005;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612183.1;locus_tag=IXO1088_013005;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2679788 2681659 . - . ID=gene-IXO1088_013010;Name=IXO1088_013010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013010 CP040687.1 Protein Homology CDS 2679788 2681659 . - 0 ID=cds-QIE16048.1;Parent=gene-IXO1088_013010;Dbxref=NCBI_GP:QIE16048.1;Name=QIE16048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258845.1;locus_tag=IXO1088_013010;product=DUF4105 domain-containing protein;protein_id=QIE16048.1;transl_table=11 CP040687.1 Genbank gene 2681656 2681955 . - . ID=gene-IXO1088_013015;Name=IXO1088_013015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013015 CP040687.1 Protein Homology CDS 2681656 2681955 . - 0 ID=cds-QIE16049.1;Parent=gene-IXO1088_013015;Dbxref=NCBI_GP:QIE16049.1;Name=QIE16049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637192.1;locus_tag=IXO1088_013015;product=DUF2388 domain-containing protein;protein_id=QIE16049.1;transl_table=11 CP040687.1 Genbank gene 2681990 2683408 . - . ID=gene-IXO1088_013020;Name=IXO1088_013020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013020 CP040687.1 Protein Homology CDS 2681990 2683408 . - 0 ID=cds-QIE16050.1;Parent=gene-IXO1088_013020;Dbxref=NCBI_GP:QIE16050.1;Name=QIE16050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637191.1;locus_tag=IXO1088_013020;product=FAD-binding oxidoreductase;protein_id=QIE16050.1;transl_table=11 CP040687.1 Genbank gene 2683617 2684858 . + . ID=gene-IXO1088_013025;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=IXO1088_013025 CP040687.1 Protein Homology CDS 2683617 2684858 . + 0 ID=cds-QIE17981.1;Parent=gene-IXO1088_013025;Dbxref=NCBI_GP:QIE17981.1;Name=QIE17981.1;gbkey=CDS;gene=serA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637190.1;locus_tag=IXO1088_013025;product=phosphoglycerate dehydrogenase;protein_id=QIE17981.1;transl_table=11 CP040687.1 Genbank gene 2685007 2685594 . - . ID=gene-IXO1088_013030;Name=IXO1088_013030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013030 CP040687.1 Protein Homology CDS 2685007 2685594 . - 0 ID=cds-QIE16051.1;Parent=gene-IXO1088_013030;Dbxref=NCBI_GP:QIE16051.1;Name=QIE16051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367142.1;locus_tag=IXO1088_013030;product=NUDIX hydrolase;protein_id=QIE16051.1;transl_table=11 CP040687.1 Genbank gene 2685731 2687212 . + . ID=gene-IXO1088_013035;Name=IXO1088_013035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013035 CP040687.1 Protein Homology CDS 2685731 2687212 . + 0 ID=cds-QIE17982.1;Parent=gene-IXO1088_013035;Dbxref=NCBI_GP:QIE17982.1;Name=QIE17982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637187.1;locus_tag=IXO1088_013035;product=amino acid permease;protein_id=QIE17982.1;transl_table=11 CP040687.1 Genbank gene 2687289 2688719 . + . ID=gene-IXO1088_013040;Name=IXO1088_013040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013040 CP040687.1 Protein Homology CDS 2687289 2688719 . + 0 ID=cds-QIE16052.1;Parent=gene-IXO1088_013040;Dbxref=NCBI_GP:QIE16052.1;Name=QIE16052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637186.1;locus_tag=IXO1088_013040;product=amino acid permease;protein_id=QIE16052.1;transl_table=11 CP040687.1 Genbank gene 2688808 2689485 . + . ID=gene-IXO1088_013045;Name=IXO1088_013045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013045 CP040687.1 Protein Homology CDS 2688808 2689485 . + 0 ID=cds-QIE16053.1;Parent=gene-IXO1088_013045;Dbxref=NCBI_GP:QIE16053.1;Name=QIE16053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258838.1;locus_tag=IXO1088_013045;product=methylthioribulose 1-phosphate dehydratase;protein_id=QIE16053.1;transl_table=11 CP040687.1 Genbank gene 2689497 2690063 . + . ID=gene-IXO1088_013050;Name=IXO1088_013050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013050 CP040687.1 Protein Homology CDS 2689497 2690063 . + 0 ID=cds-QIE16054.1;Parent=gene-IXO1088_013050;Dbxref=NCBI_GP:QIE16054.1;Name=QIE16054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637184.1;locus_tag=IXO1088_013050;product=acireductone dioxygenase;protein_id=QIE16054.1;transl_table=11 CP040687.1 Genbank gene 2690066 2690764 . + . ID=gene-IXO1088_013055;Name=mtnC;gbkey=Gene;gene=mtnC;gene_biotype=protein_coding;locus_tag=IXO1088_013055 CP040687.1 Protein Homology CDS 2690066 2690764 . + 0 ID=cds-QIE16055.1;Parent=gene-IXO1088_013055;Dbxref=NCBI_GP:QIE16055.1;Name=QIE16055.1;gbkey=CDS;gene=mtnC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303202.1;locus_tag=IXO1088_013055;product=acireductone synthase;protein_id=QIE16055.1;transl_table=11 CP040687.1 Genbank gene 2690823 2690900 . - . ID=gene-IXO1088_013060;Name=IXO1088_013060;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_013060 CP040687.1 cmsearch ncRNA 2690823 2690900 . - . ID=rna-IXO1088_013060;Parent=gene-IXO1088_013060;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_013060;product=sX9 sRNA CP040687.1 cmsearch exon 2690823 2690900 . - . ID=exon-IXO1088_013060-1;Parent=rna-IXO1088_013060;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_013060;product=sX9 sRNA CP040687.1 Genbank gene 2691090 2692175 . + . ID=gene-IXO1088_013065;Name=IXO1088_013065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013065 CP040687.1 Protein Homology CDS 2691090 2692175 . + 0 ID=cds-QIE16056.1;Parent=gene-IXO1088_013065;Dbxref=NCBI_GP:QIE16056.1;Name=QIE16056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503181.1;locus_tag=IXO1088_013065;product=peptidase C13;protein_id=QIE16056.1;transl_table=11 CP040687.1 Genbank pseudogene 2692623 2693890 . - . ID=gene-IXO1088_013070;Name=IXO1088_013070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_013070;pseudo=true CP040687.1 Protein Homology CDS 2692623 2693890 . - 0 ID=cds-IXO1088_013070;Parent=gene-IXO1088_013070;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637181.2;locus_tag=IXO1088_013070;product=calcineurin phosphoesterase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2694007 2694750 . + . ID=gene-IXO1088_013075;Name=IXO1088_013075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_013075;pseudo=true CP040687.1 Protein Homology CDS 2694007 2694750 . + 0 ID=cds-IXO1088_013075;Parent=gene-IXO1088_013075;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_013075;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2694875 2695843 . - . ID=gene-IXO1088_013080;Name=IXO1088_013080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013080 CP040687.1 Protein Homology CDS 2694875 2695843 . - 0 ID=cds-QIE16057.1;Parent=gene-IXO1088_013080;Dbxref=NCBI_GP:QIE16057.1;Name=QIE16057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_013080;product=IS5-like element ISXo1 family transposase;protein_id=QIE16057.1;transl_table=11 CP040687.1 Genbank gene 2695952 2696750 . + . ID=gene-IXO1088_013085;Name=IXO1088_013085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013085 CP040687.1 Protein Homology CDS 2695952 2696223 . + 0 ID=cds-QIE16058.1;Parent=gene-IXO1088_013085;Dbxref=NCBI_GP:QIE16058.1;Name=QIE16058.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_013085;product=IS5 family transposase;protein_id=QIE16058.1;transl_table=11 CP040687.1 Protein Homology CDS 2696222 2696750 . + 1 ID=cds-QIE16058.1;Parent=gene-IXO1088_013085;Dbxref=NCBI_GP:QIE16058.1;Name=QIE16058.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_013085;product=IS5 family transposase;protein_id=QIE16058.1;transl_table=11 CP040687.1 Genbank pseudogene 2696760 2697334 . + . ID=gene-IXO1088_013090;Name=IXO1088_013090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_013090;pseudo=true CP040687.1 Protein Homology CDS 2696760 2697334 . + 0 ID=cds-IXO1088_013090;Parent=gene-IXO1088_013090;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_013090;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2697568 2698725 . + . ID=gene-IXO1088_013095;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=IXO1088_013095 CP040687.1 Protein Homology CDS 2697568 2698725 . + 0 ID=cds-QIE16059.1;Parent=gene-IXO1088_013095;Dbxref=NCBI_GP:QIE16059.1;Name=QIE16059.1;gbkey=CDS;gene=moeB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112861.1;locus_tag=IXO1088_013095;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=QIE16059.1;transl_table=11 CP040687.1 Genbank pseudogene 2698722 2698898 . - . ID=gene-IXO1088_013100;Name=IXO1088_013100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_013100;pseudo=true CP040687.1 Protein Homology CDS 2698722 2698898 . - 0 ID=cds-IXO1088_013100;Parent=gene-IXO1088_013100;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_013100;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2699002 2699967 . + . ID=gene-IXO1088_013105;Name=IXO1088_013105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013105 CP040687.1 Protein Homology CDS 2699002 2699967 . + 0 ID=cds-QIE16060.1;Parent=gene-IXO1088_013105;Dbxref=NCBI_GP:QIE16060.1;Name=QIE16060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_013105;product=IS1595-like element ISXo5 family transposase;protein_id=QIE16060.1;transl_table=11 CP040687.1 Genbank gene 2699945 2701420 . - . ID=gene-IXO1088_013110;Name=IXO1088_013110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013110 CP040687.1 Protein Homology CDS 2699945 2701420 . - 0 ID=cds-QIE16061.1;Parent=gene-IXO1088_013110;Dbxref=NCBI_GP:QIE16061.1;Name=QIE16061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445029.1;locus_tag=IXO1088_013110;product=IS5 family transposase;protein_id=QIE16061.1;transl_table=11 CP040687.1 Genbank gene 2701539 2702858 . - . ID=gene-IXO1088_013115;Name=IXO1088_013115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013115 CP040687.1 Protein Homology CDS 2701539 2702858 . - 0 ID=cds-QIE16062.1;Parent=gene-IXO1088_013115;Dbxref=NCBI_GP:QIE16062.1;Name=QIE16062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_013115;product=IS701 family transposase;protein_id=QIE16062.1;transl_table=11 CP040687.1 Genbank pseudogene 2702939 2703350 . - . ID=gene-IXO1088_013120;Name=IXO1088_013120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_013120;pseudo=true CP040687.1 Protein Homology CDS 2702939 2703350 . - 0 ID=cds-IXO1088_013120;Parent=gene-IXO1088_013120;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_013120;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2703360 2704172 . - . ID=gene-IXO1088_013125;Name=IXO1088_013125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_013125;pseudo=true CP040687.1 Protein Homology CDS 2703360 2704172 . - 0 ID=cds-IXO1088_013125;Parent=gene-IXO1088_013125;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407232.1;locus_tag=IXO1088_013125;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2704220 2704489 . + . ID=gene-IXO1088_013130;Name=IXO1088_013130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_013130;pseudo=true CP040687.1 Protein Homology CDS 2704220 2704489 . + 0 ID=cds-IXO1088_013130;Parent=gene-IXO1088_013130;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_013130;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2704553 2705769 . + . ID=gene-IXO1088_013135;Name=IXO1088_013135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_013135;pseudo=true CP040687.1 Protein Homology CDS 2704553 2705769 . + 0 ID=cds-IXO1088_013135;Parent=gene-IXO1088_013135;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1088_013135;product=ISL3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2705804 2706319 . + . ID=gene-IXO1088_013140;Name=IXO1088_013140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_013140;pseudo=true CP040687.1 Protein Homology CDS 2705804 2706319 . + 0 ID=cds-IXO1088_013140;Parent=gene-IXO1088_013140;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_013140;product=IS5-like element ISXo3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2706233 2706535 . - . ID=gene-IXO1088_013145;Name=IXO1088_013145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013145 CP040687.1 Protein Homology CDS 2706233 2706535 . - 0 ID=cds-QIE16063.1;Parent=gene-IXO1088_013145;Dbxref=NCBI_GP:QIE16063.1;Name=QIE16063.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13936.4;locus_tag=IXO1088_013145;product=hypothetical protein;protein_id=QIE16063.1;transl_table=11 CP040687.1 Genbank pseudogene 2706582 2706746 . - . ID=gene-IXO1088_013150;Name=IXO1088_013150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_013150;pseudo=true CP040687.1 Protein Homology CDS 2706582 2706746 . - 0 ID=cds-IXO1088_013150;Parent=gene-IXO1088_013150;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_013150;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2707126 2708184 . + . ID=gene-IXO1088_013155;Name=IXO1088_013155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013155 CP040687.1 Protein Homology CDS 2707126 2708184 . + 0 ID=cds-QIE16064.1;Parent=gene-IXO1088_013155;Dbxref=NCBI_GP:QIE16064.1;Name=QIE16064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257047.1;locus_tag=IXO1088_013155;product=IS630 family transposase;protein_id=QIE16064.1;transl_table=11 CP040687.1 Genbank gene 2708250 2708326 . + . ID=gene-IXO1088_013160;Name=IXO1088_013160;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_013160 CP040687.1 cmsearch ncRNA 2708250 2708326 . + . ID=rna-IXO1088_013160;Parent=gene-IXO1088_013160;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_013160;product=sX9 sRNA CP040687.1 cmsearch exon 2708250 2708326 . + . ID=exon-IXO1088_013160-1;Parent=rna-IXO1088_013160;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_013160;product=sX9 sRNA CP040687.1 Genbank gene 2708381 2709601 . - . ID=gene-IXO1088_013165;Name=IXO1088_013165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013165 CP040687.1 Protein Homology CDS 2708381 2709601 . - 0 ID=cds-QIE16065.1;Parent=gene-IXO1088_013165;Dbxref=NCBI_GP:QIE16065.1;Name=QIE16065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637353.1;locus_tag=IXO1088_013165;product=molybdopterin molybdotransferase MoeA;protein_id=QIE16065.1;transl_table=11 CP040687.1 Genbank gene 2709916 2711313 . - . ID=gene-IXO1088_013170;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=IXO1088_013170 CP040687.1 Protein Homology CDS 2709916 2711313 . - 0 ID=cds-QIE16066.1;Parent=gene-IXO1088_013170;Dbxref=NCBI_GP:QIE16066.1;Name=QIE16066.1;gbkey=CDS;gene=der;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637352.1;locus_tag=IXO1088_013170;product=ribosome biogenesis GTPase Der;protein_id=QIE16066.1;transl_table=11 CP040687.1 Genbank gene 2711324 2712544 . - . ID=gene-IXO1088_013175;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=IXO1088_013175 CP040687.1 Protein Homology CDS 2711324 2712544 . - 0 ID=cds-QIE16067.1;Parent=gene-IXO1088_013175;Dbxref=NCBI_GP:QIE16067.1;Name=QIE16067.1;gbkey=CDS;gene=bamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637351.1;locus_tag=IXO1088_013175;product=outer membrane protein assembly factor BamB;protein_id=QIE16067.1;transl_table=11 CP040687.1 Genbank gene 2712541 2713179 . - . ID=gene-IXO1088_013180;Name=IXO1088_013180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013180 CP040687.1 Protein Homology CDS 2712541 2713179 . - 0 ID=cds-QIE16068.1;Parent=gene-IXO1088_013180;Dbxref=NCBI_GP:QIE16068.1;Name=QIE16068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637350.1;locus_tag=IXO1088_013180;product=tetratricopeptide repeat protein;protein_id=QIE16068.1;transl_table=11 CP040687.1 Genbank gene 2713250 2714110 . - . ID=gene-IXO1088_013185;Name=IXO1088_013185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013185 CP040687.1 Protein Homology CDS 2713250 2714110 . - 0 ID=cds-QIE16069.1;Parent=gene-IXO1088_013185;Dbxref=NCBI_GP:QIE16069.1;Name=QIE16069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637349.1;locus_tag=IXO1088_013185;product=helix-turn-helix domain-containing protein;protein_id=QIE16069.1;transl_table=11 CP040687.1 Genbank gene 2714107 2714895 . - . ID=gene-IXO1088_013190;Name=pilW;gbkey=Gene;gene=pilW;gene_biotype=protein_coding;locus_tag=IXO1088_013190 CP040687.1 Protein Homology CDS 2714107 2714895 . - 0 ID=cds-QIE17983.1;Parent=gene-IXO1088_013190;Dbxref=NCBI_GP:QIE17983.1;Name=QIE17983.1;gbkey=CDS;gene=pilW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637348.1;locus_tag=IXO1088_013190;product=type IV pilus biogenesis/stability protein PilW;protein_id=QIE17983.1;transl_table=11 CP040687.1 Genbank gene 2714906 2716111 . - . ID=gene-IXO1088_013195;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=IXO1088_013195 CP040687.1 Protein Homology CDS 2714906 2716111 . - 0 ID=cds-QIE16070.1;Parent=gene-IXO1088_013195;Dbxref=NCBI_GP:QIE16070.1;Name=QIE16070.1;gbkey=CDS;gene=rlmN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637347.1;locus_tag=IXO1088_013195;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=QIE16070.1;transl_table=11 CP040687.1 Genbank gene 2716130 2716555 . - . ID=gene-IXO1088_013200;Name=IXO1088_013200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013200 CP040687.1 Protein Homology CDS 2716130 2716555 . - 0 ID=cds-QIE16071.1;Parent=gene-IXO1088_013200;Dbxref=NCBI_GP:QIE16071.1;Name=QIE16071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005409295.1;locus_tag=IXO1088_013200;product=nucleoside-diphosphate kinase;protein_id=QIE16071.1;transl_table=11 CP040687.1 Genbank gene 2716775 2717407 . + . ID=gene-IXO1088_013205;Name=IXO1088_013205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013205 CP040687.1 Protein Homology CDS 2716775 2717407 . + 0 ID=cds-QIE16072.1;Parent=gene-IXO1088_013205;Dbxref=NCBI_GP:QIE16072.1;Name=QIE16072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637345.1;locus_tag=IXO1088_013205;product=TetR/AcrR family transcriptional regulator;protein_id=QIE16072.1;transl_table=11 CP040687.1 Genbank gene 2717432 2719804 . + . ID=gene-IXO1088_013210;Name=IXO1088_013210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013210 CP040687.1 Protein Homology CDS 2717432 2719804 . + 0 ID=cds-QIE16073.1;Parent=gene-IXO1088_013210;Dbxref=NCBI_GP:QIE16073.1;Name=QIE16073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158309.1;locus_tag=IXO1088_013210;product=3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein;protein_id=QIE16073.1;transl_table=11 CP040687.1 Genbank gene 2719962 2721167 . + . ID=gene-IXO1088_013215;Name=IXO1088_013215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013215 CP040687.1 Protein Homology CDS 2719962 2721167 . + 0 ID=cds-QIE16074.1;Parent=gene-IXO1088_013215;Dbxref=NCBI_GP:QIE16074.1;Name=QIE16074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637343.1;locus_tag=IXO1088_013215;product=acetyl-CoA C-acyltransferase;protein_id=QIE16074.1;transl_table=11 CP040687.1 Genbank gene 2721210 2722008 . + . ID=gene-IXO1088_013220;Name=IXO1088_013220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013220 CP040687.1 Protein Homology CDS 2721210 2721481 . + 0 ID=cds-QIE16075.1;Parent=gene-IXO1088_013220;Dbxref=NCBI_GP:QIE16075.1;Name=QIE16075.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_013220;product=IS5 family transposase;protein_id=QIE16075.1;transl_table=11 CP040687.1 Protein Homology CDS 2721480 2722008 . + 1 ID=cds-QIE16075.1;Parent=gene-IXO1088_013220;Dbxref=NCBI_GP:QIE16075.1;Name=QIE16075.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_013220;product=IS5 family transposase;protein_id=QIE16075.1;transl_table=11 CP040687.1 Genbank gene 2722340 2723671 . + . ID=gene-IXO1088_013225;Name=IXO1088_013225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013225 CP040687.1 Protein Homology CDS 2722340 2723671 . + 0 ID=cds-QIE16076.1;Parent=gene-IXO1088_013225;Dbxref=NCBI_GP:QIE16076.1;Name=QIE16076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503359.1;locus_tag=IXO1088_013225;product=voltage-gated chloride channel protein;protein_id=QIE16076.1;transl_table=11 CP040687.1 Genbank gene 2723668 2724018 . + . ID=gene-IXO1088_013230;Name=IXO1088_013230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013230 CP040687.1 Protein Homology CDS 2723668 2724018 . + 0 ID=cds-QIE16077.1;Parent=gene-IXO1088_013230;Dbxref=NCBI_GP:QIE16077.1;Name=QIE16077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408659.1;locus_tag=IXO1088_013230;product=hypothetical protein;protein_id=QIE16077.1;transl_table=11 CP040687.1 Genbank gene 2724050 2724457 . + . ID=gene-IXO1088_013235;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=IXO1088_013235 CP040687.1 Protein Homology CDS 2724050 2724457 . + 0 ID=cds-QIE16078.1;Parent=gene-IXO1088_013235;Dbxref=NCBI_GP:QIE16078.1;Name=QIE16078.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503356.1;locus_tag=IXO1088_013235;product=fluoride efflux transporter CrcB;protein_id=QIE16078.1;transl_table=11 CP040687.1 Genbank gene 2724454 2724780 . + . ID=gene-IXO1088_013240;Name=IXO1088_013240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013240 CP040687.1 Protein Homology CDS 2724454 2724780 . + 0 ID=cds-QIE16079.1;Parent=gene-IXO1088_013240;Dbxref=NCBI_GP:QIE16079.1;Name=QIE16079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259175.1;locus_tag=IXO1088_013240;product=DUF190 domain-containing protein;protein_id=QIE16079.1;transl_table=11 CP040687.1 Genbank gene 2724812 2726188 . - . ID=gene-IXO1088_013245;Name=IXO1088_013245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013245 CP040687.1 Protein Homology CDS 2724812 2726188 . - 0 ID=cds-QIE17984.1;Parent=gene-IXO1088_013245;Dbxref=NCBI_GP:QIE17984.1;Name=QIE17984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303930.1;locus_tag=IXO1088_013245;product=replication-associated recombination protein A;protein_id=QIE17984.1;transl_table=11 CP040687.1 Genbank pseudogene 2726195 2726394 . - . ID=gene-IXO1088_013250;Name=IXO1088_013250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_013250;pseudo=true CP040687.1 Protein Homology CDS 2726195 2726394 . - 0 ID=cds-IXO1088_013250;Parent=gene-IXO1088_013250;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112866.1;locus_tag=IXO1088_013250;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2726425 2730591 . + . ID=gene-IXO1088_013255;Name=IXO1088_013255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013255 CP040687.1 Protein Homology CDS 2726425 2730591 . + 0 ID=cds-QIE16080.1;Parent=gene-IXO1088_013255;Dbxref=NCBI_GP:QIE16080.1;Name=QIE16080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637340.2;locus_tag=IXO1088_013255;product=type III effector;protein_id=QIE16080.1;transl_table=11 CP040687.1 Genbank gene 2730704 2731333 . - . ID=gene-IXO1088_013260;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=IXO1088_013260 CP040687.1 Protein Homology CDS 2730704 2731333 . - 0 ID=cds-QIE17985.1;Parent=gene-IXO1088_013260;Dbxref=NCBI_GP:QIE17985.1;Name=QIE17985.1;gbkey=CDS;gene=lolA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259178.1;locus_tag=IXO1088_013260;product=outer membrane lipoprotein chaperone LolA;protein_id=QIE17985.1;transl_table=11 CP040687.1 Genbank gene 2731440 2733368 . - . ID=gene-IXO1088_013265;Name=IXO1088_013265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013265 CP040687.1 Protein Homology CDS 2731440 2733368 . - 0 ID=cds-QIE16081.1;Parent=gene-IXO1088_013265;Dbxref=NCBI_GP:QIE16081.1;Name=QIE16081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637338.1;locus_tag=IXO1088_013265;product=DUF3857 domain-containing protein;protein_id=QIE16081.1;transl_table=11 CP040687.1 Genbank gene 2733531 2735891 . - . ID=gene-IXO1088_013270;Name=IXO1088_013270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013270 CP040687.1 Protein Homology CDS 2733531 2735891 . - 0 ID=cds-QIE16082.1;Parent=gene-IXO1088_013270;Dbxref=NCBI_GP:QIE16082.1;Name=QIE16082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259180.1;locus_tag=IXO1088_013270;product=cell division protein FtsK;protein_id=QIE16082.1;transl_table=11 CP040687.1 Genbank gene 2736175 2737143 . + . ID=gene-IXO1088_013275;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=IXO1088_013275 CP040687.1 Protein Homology CDS 2736175 2737143 . + 0 ID=cds-QIE16083.1;Parent=gene-IXO1088_013275;Dbxref=NCBI_GP:QIE16083.1;Name=QIE16083.1;gbkey=CDS;gene=trxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637336.1;locus_tag=IXO1088_013275;product=thioredoxin-disulfide reductase;protein_id=QIE16083.1;transl_table=11 CP040687.1 Genbank gene 2737201 2738322 . + . ID=gene-IXO1088_013280;Name=IXO1088_013280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013280 CP040687.1 Protein Homology CDS 2737201 2738322 . + 0 ID=cds-QIE16084.1;Parent=gene-IXO1088_013280;Dbxref=NCBI_GP:QIE16084.1;Name=QIE16084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300271.1;locus_tag=IXO1088_013280;product=N-acetyltransferase;protein_id=QIE16084.1;transl_table=11 CP040687.1 Genbank pseudogene 2738584 2739616 . + . ID=gene-IXO1088_013285;Name=IXO1088_013285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_013285;pseudo=true CP040687.1 Protein Homology CDS 2738584 2739616 . + 0 ID=cds-IXO1088_013285;Parent=gene-IXO1088_013285;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575319.1;locus_tag=IXO1088_013285;product=NAD-dependent epimerase/dehydratase family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2739750 2740502 . + . ID=gene-IXO1088_013290;Name=IXO1088_013290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013290 CP040687.1 Protein Homology CDS 2739750 2740502 . + 0 ID=cds-QIE17986.1;Parent=gene-IXO1088_013290;Dbxref=NCBI_GP:QIE17986.1;Name=QIE17986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_042465566.1;locus_tag=IXO1088_013290;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=QIE17986.1;transl_table=11 CP040687.1 Genbank gene 2740583 2740801 . + . ID=gene-IXO1088_013295;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=IXO1088_013295 CP040687.1 Protein Homology CDS 2740583 2740801 . + 0 ID=cds-QIE16085.1;Parent=gene-IXO1088_013295;Dbxref=NCBI_GP:QIE16085.1;Name=QIE16085.1;gbkey=CDS;gene=infA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637333.1;locus_tag=IXO1088_013295;product=translation initiation factor IF-1;protein_id=QIE16085.1;transl_table=11 CP040687.1 Genbank gene 2741082 2743364 . - . ID=gene-IXO1088_013300;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=IXO1088_013300 CP040687.1 Protein Homology CDS 2741082 2743364 . - 0 ID=cds-QIE16086.1;Parent=gene-IXO1088_013300;Dbxref=NCBI_GP:QIE16086.1;Name=QIE16086.1;gbkey=CDS;gene=clpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637332.1;locus_tag=IXO1088_013300;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=QIE16086.1;transl_table=11 CP040687.1 Genbank gene 2743508 2743828 . - . ID=gene-IXO1088_013305;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=IXO1088_013305 CP040687.1 Protein Homology CDS 2743508 2743828 . - 0 ID=cds-QIE16087.1;Parent=gene-IXO1088_013305;Dbxref=NCBI_GP:QIE16087.1;Name=QIE16087.1;gbkey=CDS;gene=clpS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637331.1;locus_tag=IXO1088_013305;product=ATP-dependent Clp protease adapter ClpS;protein_id=QIE16087.1;transl_table=11 CP040687.1 Genbank gene 2744079 2744537 . + . ID=gene-IXO1088_013310;Name=IXO1088_013310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013310 CP040687.1 Protein Homology CDS 2744079 2744537 . + 0 ID=cds-QIE16088.1;Parent=gene-IXO1088_013310;Dbxref=NCBI_GP:QIE16088.1;Name=QIE16088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637330.1;locus_tag=IXO1088_013310;product=NUDIX hydrolase;protein_id=QIE16088.1;transl_table=11 CP040687.1 Genbank gene 2744534 2745670 . + . ID=gene-IXO1088_013315;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=IXO1088_013315 CP040687.1 Protein Homology CDS 2744534 2745670 . + 0 ID=cds-QIE16089.1;Parent=gene-IXO1088_013315;Dbxref=NCBI_GP:QIE16089.1;Name=QIE16089.1;gbkey=CDS;gene=mnmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637329.1;locus_tag=IXO1088_013315;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=QIE16089.1;transl_table=11 CP040687.1 Genbank gene 2745670 2746284 . + . ID=gene-IXO1088_013320;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=IXO1088_013320 CP040687.1 Protein Homology CDS 2745670 2746284 . + 0 ID=cds-QIE16090.1;Parent=gene-IXO1088_013320;Dbxref=NCBI_GP:QIE16090.1;Name=QIE16090.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964280.1;locus_tag=IXO1088_013320;product=high frequency lysogenization protein HflD;protein_id=QIE16090.1;transl_table=11 CP040687.1 Genbank gene 2746432 2747622 . + . ID=gene-IXO1088_013325;Name=IXO1088_013325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013325 CP040687.1 Protein Homology CDS 2746432 2747622 . + 0 ID=cds-QIE16091.1;Parent=gene-IXO1088_013325;Dbxref=NCBI_GP:QIE16091.1;Name=QIE16091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637327.1;locus_tag=IXO1088_013325;product=chemotaxis protein;protein_id=QIE16091.1;transl_table=11 CP040687.1 Genbank gene 2747708 2747995 . + . ID=gene-IXO1088_013330;Name=IXO1088_013330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013330 CP040687.1 Protein Homology CDS 2747708 2747995 . + 0 ID=cds-QIE16092.1;Parent=gene-IXO1088_013330;Dbxref=NCBI_GP:QIE16092.1;Name=QIE16092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259192.1;locus_tag=IXO1088_013330;product=hypothetical protein;protein_id=QIE16092.1;transl_table=11 CP040687.1 Genbank gene 2748270 2748953 . + . ID=gene-IXO1088_013335;Name=IXO1088_013335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013335 CP040687.1 Protein Homology CDS 2748270 2748953 . + 0 ID=cds-QIE16093.1;Parent=gene-IXO1088_013335;Dbxref=NCBI_GP:QIE16093.1;Name=QIE16093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259193.1;locus_tag=IXO1088_013335;product=hypothetical protein;protein_id=QIE16093.1;transl_table=11 CP040687.1 Genbank gene 2749424 2751940 . - . ID=gene-IXO1088_013340;Name=IXO1088_013340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013340 CP040687.1 Protein Homology CDS 2749424 2751940 . - 0 ID=cds-QIE17987.1;Parent=gene-IXO1088_013340;Dbxref=NCBI_GP:QIE17987.1;Name=QIE17987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637325.2;locus_tag=IXO1088_013340;product=EAL domain-containing protein;protein_id=QIE17987.1;transl_table=11 CP040687.1 Genbank gene 2752370 2754463 . + . ID=gene-IXO1088_013345;Name=IXO1088_013345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013345 CP040687.1 Protein Homology CDS 2752370 2754463 . + 0 ID=cds-QIE16094.1;Parent=gene-IXO1088_013345;Dbxref=NCBI_GP:QIE16094.1;Name=QIE16094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637324.1;locus_tag=IXO1088_013345;product=PAS domain S-box protein;protein_id=QIE16094.1;transl_table=11 CP040687.1 Genbank gene 2754467 2756188 . + . ID=gene-IXO1088_013350;Name=IXO1088_013350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013350 CP040687.1 Protein Homology CDS 2754467 2756188 . + 0 ID=cds-QIE16095.1;Parent=gene-IXO1088_013350;Dbxref=NCBI_GP:QIE16095.1;Name=QIE16095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637323.1;locus_tag=IXO1088_013350;product=EAL domain-containing protein;protein_id=QIE16095.1;transl_table=11 CP040687.1 Genbank gene 2756316 2757542 . - . ID=gene-IXO1088_013355;Name=IXO1088_013355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013355 CP040687.1 Protein Homology CDS 2756316 2757542 . - 0 ID=cds-QIE16096.1;Parent=gene-IXO1088_013355;Dbxref=NCBI_GP:QIE16096.1;Name=QIE16096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637322.1;locus_tag=IXO1088_013355;product=sensor histidine kinase;protein_id=QIE16096.1;transl_table=11 CP040687.1 Genbank gene 2757708 2758040 . - . ID=gene-IXO1088_013360;Name=IXO1088_013360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013360 CP040687.1 Protein Homology CDS 2757708 2758040 . - 0 ID=cds-QIE16097.1;Parent=gene-IXO1088_013360;Dbxref=NCBI_GP:QIE16097.1;Name=QIE16097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637321.1;locus_tag=IXO1088_013360;product=flagellar protein FlgN;protein_id=QIE16097.1;transl_table=11 CP040687.1 Genbank gene 2758056 2758367 . - . ID=gene-IXO1088_013365;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=IXO1088_013365 CP040687.1 Protein Homology CDS 2758056 2758367 . - 0 ID=cds-QIE16098.1;Parent=gene-IXO1088_013365;Dbxref=NCBI_GP:QIE16098.1;Name=QIE16098.1;gbkey=CDS;gene=flgM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637320.1;locus_tag=IXO1088_013365;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=QIE16098.1;transl_table=11 CP040687.1 Genbank gene 2758434 2759078 . - . ID=gene-IXO1088_013370;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=IXO1088_013370 CP040687.1 Protein Homology CDS 2758434 2759078 . - 0 ID=cds-QIE16099.1;Parent=gene-IXO1088_013370;Dbxref=NCBI_GP:QIE16099.1;Name=QIE16099.1;gbkey=CDS;gene=flgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637319.2;locus_tag=IXO1088_013370;product=flagellar basal body P-ring formation protein FlgA;protein_id=QIE16099.1;transl_table=11 CP040687.1 Genbank gene 2759437 2760381 . + . ID=gene-IXO1088_013375;Name=IXO1088_013375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013375 CP040687.1 Protein Homology CDS 2759437 2760381 . + 0 ID=cds-QIE16100.1;Parent=gene-IXO1088_013375;Dbxref=NCBI_GP:QIE16100.1;Name=QIE16100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637318.1;locus_tag=IXO1088_013375;product=chemotaxis protein CheV;protein_id=QIE16100.1;transl_table=11 CP040687.1 Genbank gene 2760696 2761094 . + . ID=gene-IXO1088_013380;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=IXO1088_013380 CP040687.1 Protein Homology CDS 2760696 2761094 . + 0 ID=cds-QIE16101.1;Parent=gene-IXO1088_013380;Dbxref=NCBI_GP:QIE16101.1;Name=QIE16101.1;gbkey=CDS;gene=flgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637317.1;locus_tag=IXO1088_013380;product=flagellar basal body rod protein FlgB;protein_id=QIE16101.1;transl_table=11 CP040687.1 Genbank gene 2761098 2761505 . + . ID=gene-IXO1088_013385;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=IXO1088_013385 CP040687.1 Protein Homology CDS 2761098 2761505 . + 0 ID=cds-QIE16102.1;Parent=gene-IXO1088_013385;Dbxref=NCBI_GP:QIE16102.1;Name=QIE16102.1;gbkey=CDS;gene=flgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637316.1;locus_tag=IXO1088_013385;product=flagellar basal body rod protein FlgC;protein_id=QIE16102.1;transl_table=11 CP040687.1 Genbank gene 2761543 2762208 . + . ID=gene-IXO1088_013390;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=IXO1088_013390 CP040687.1 Protein Homology CDS 2761543 2762208 . + 0 ID=cds-QIE16103.1;Parent=gene-IXO1088_013390;Dbxref=NCBI_GP:QIE16103.1;Name=QIE16103.1;Note=acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637315.1;locus_tag=IXO1088_013390;product=flagellar basal body rod modification protein;protein_id=QIE16103.1;transl_table=11 CP040687.1 Genbank gene 2762240 2763463 . + . ID=gene-IXO1088_013395;Name=IXO1088_013395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013395 CP040687.1 Protein Homology CDS 2762240 2763463 . + 0 ID=cds-QIE16104.1;Parent=gene-IXO1088_013395;Dbxref=NCBI_GP:QIE16104.1;Name=QIE16104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637314.1;locus_tag=IXO1088_013395;product=flagellar hook protein FlgE;protein_id=QIE16104.1;transl_table=11 CP040687.1 Genbank gene 2763609 2764364 . + . ID=gene-IXO1088_013400;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;locus_tag=IXO1088_013400 CP040687.1 Protein Homology CDS 2763609 2764364 . + 0 ID=cds-QIE16105.1;Parent=gene-IXO1088_013400;Dbxref=NCBI_GP:QIE16105.1;Name=QIE16105.1;gbkey=CDS;gene=flgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637313.1;locus_tag=IXO1088_013400;product=flagellar basal-body rod protein FlgF;protein_id=QIE16105.1;transl_table=11 CP040687.1 Genbank pseudogene 2764466 2764651 . - . ID=gene-IXO1088_013405;Name=IXO1088_013405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_013405;pseudo=true CP040687.1 Protein Homology CDS 2764466 2764651 . - 0 ID=cds-IXO1088_013405;Parent=gene-IXO1088_013405;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376063.1;locus_tag=IXO1088_013405;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2764951 2765736 . + . ID=gene-IXO1088_013410;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=IXO1088_013410 CP040687.1 Protein Homology CDS 2764951 2765736 . + 0 ID=cds-QIE16106.1;Parent=gene-IXO1088_013410;Dbxref=NCBI_GP:QIE16106.1;Name=QIE16106.1;gbkey=CDS;gene=flgG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901723.1;locus_tag=IXO1088_013410;product=flagellar basal-body rod protein FlgG;protein_id=QIE16106.1;transl_table=11 CP040687.1 Genbank gene 2765774 2766466 . + . ID=gene-IXO1088_013415;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=IXO1088_013415 CP040687.1 Protein Homology CDS 2765774 2766466 . + 0 ID=cds-QIE16107.1;Parent=gene-IXO1088_013415;Dbxref=NCBI_GP:QIE16107.1;Name=QIE16107.1;gbkey=CDS;gene=flgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637311.1;locus_tag=IXO1088_013415;product=flagellar basal body L-ring protein FlgH;protein_id=QIE16107.1;transl_table=11 CP040687.1 Genbank gene 2766477 2767595 . + . ID=gene-IXO1088_013420;Name=IXO1088_013420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013420 CP040687.1 Protein Homology CDS 2766477 2767595 . + 0 ID=cds-QIE16108.1;Parent=gene-IXO1088_013420;Dbxref=NCBI_GP:QIE16108.1;Name=QIE16108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637310.1;locus_tag=IXO1088_013420;product=flagellar basal body P-ring protein FlgI;protein_id=QIE16108.1;transl_table=11 CP040687.1 Genbank gene 2767597 2768775 . + . ID=gene-IXO1088_013425;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=IXO1088_013425 CP040687.1 Protein Homology CDS 2767597 2768775 . + 0 ID=cds-QIE16109.1;Parent=gene-IXO1088_013425;Dbxref=NCBI_GP:QIE16109.1;Name=QIE16109.1;gbkey=CDS;gene=flgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637309.2;locus_tag=IXO1088_013425;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=QIE16109.1;transl_table=11 CP040687.1 Genbank gene 2768787 2770661 . + . ID=gene-IXO1088_013430;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=IXO1088_013430 CP040687.1 Protein Homology CDS 2768787 2770661 . + 0 ID=cds-QIE16110.1;Parent=gene-IXO1088_013430;Dbxref=NCBI_GP:QIE16110.1;Name=QIE16110.1;gbkey=CDS;gene=flgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637308.1;locus_tag=IXO1088_013430;product=flagellar hook-associated protein FlgK;protein_id=QIE16110.1;transl_table=11 CP040687.1 Genbank gene 2770661 2771866 . + . ID=gene-IXO1088_013435;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=IXO1088_013435 CP040687.1 Protein Homology CDS 2770661 2771866 . + 0 ID=cds-QIE16111.1;Parent=gene-IXO1088_013435;Dbxref=NCBI_GP:QIE16111.1;Name=QIE16111.1;gbkey=CDS;gene=flgL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637307.1;locus_tag=IXO1088_013435;product=flagellar hook-associated protein FlgL;protein_id=QIE16111.1;transl_table=11 CP040687.1 Genbank gene 2772186 2773385 . + . ID=gene-IXO1088_013440;Name=IXO1088_013440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013440 CP040687.1 Protein Homology CDS 2772186 2773385 . + 0 ID=cds-QIE16112.1;Parent=gene-IXO1088_013440;Dbxref=NCBI_GP:QIE16112.1;Name=QIE16112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637306.1;locus_tag=IXO1088_013440;product=flagellin;protein_id=QIE16112.1;transl_table=11 CP040687.1 Genbank gene 2773659 2774984 . + . ID=gene-IXO1088_013445;Name=IXO1088_013445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013445 CP040687.1 Protein Homology CDS 2773659 2774984 . + 0 ID=cds-QIE16113.1;Parent=gene-IXO1088_013445;Dbxref=NCBI_GP:QIE16113.1;Name=QIE16113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380873.1;locus_tag=IXO1088_013445;product=flagellar protein;protein_id=QIE16113.1;transl_table=11 CP040687.1 Genbank gene 2775135 2775548 . + . ID=gene-IXO1088_013450;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=IXO1088_013450 CP040687.1 Protein Homology CDS 2775135 2775548 . + 0 ID=cds-QIE17988.1;Parent=gene-IXO1088_013450;Dbxref=NCBI_GP:QIE17988.1;Name=QIE17988.1;gbkey=CDS;gene=fliS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637304.1;locus_tag=IXO1088_013450;product=flagellar export chaperone FliS;protein_id=QIE17988.1;transl_table=11 CP040687.1 Genbank gene 2775557 2775850 . + . ID=gene-IXO1088_013455;Name=IXO1088_013455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013455 CP040687.1 Protein Homology CDS 2775557 2775850 . + 0 ID=cds-QIE17989.1;Parent=gene-IXO1088_013455;Dbxref=NCBI_GP:QIE17989.1;Name=QIE17989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154657.1;locus_tag=IXO1088_013455;product=hypothetical protein;protein_id=QIE17989.1;transl_table=11 CP040687.1 Genbank gene 2775850 2776416 . + . ID=gene-IXO1088_013460;Name=IXO1088_013460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013460 CP040687.1 Protein Homology CDS 2775850 2776416 . + 0 ID=cds-QIE16114.1;Parent=gene-IXO1088_013460;Dbxref=NCBI_GP:QIE16114.1;Name=QIE16114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304087.1;locus_tag=IXO1088_013460;product=PilZ domain-containing protein;protein_id=QIE16114.1;transl_table=11 CP040687.1 Genbank gene 2776487 2777119 . + . ID=gene-IXO1088_013465;Name=IXO1088_013465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013465 CP040687.1 Protein Homology CDS 2776487 2777119 . + 0 ID=cds-QIE17990.1;Parent=gene-IXO1088_013465;Dbxref=NCBI_GP:QIE17990.1;Name=QIE17990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637301.1;locus_tag=IXO1088_013465;product=response regulator transcription factor;protein_id=QIE17990.1;transl_table=11 CP040687.1 Genbank gene 2777343 2778746 . + . ID=gene-IXO1088_013470;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=IXO1088_013470 CP040687.1 Protein Homology CDS 2777343 2778746 . + 0 ID=cds-QIE16115.1;Parent=gene-IXO1088_013470;Dbxref=NCBI_GP:QIE16115.1;Name=QIE16115.1;gbkey=CDS;gene=rpoN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637300.1;locus_tag=IXO1088_013470;product=RNA polymerase factor sigma-54;protein_id=QIE16115.1;transl_table=11 CP040687.1 Genbank gene 2778755 2779135 . + . ID=gene-IXO1088_013475;Name=IXO1088_013475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013475 CP040687.1 Protein Homology CDS 2778755 2779135 . + 0 ID=cds-QIE16116.1;Parent=gene-IXO1088_013475;Dbxref=NCBI_GP:QIE16116.1;Name=QIE16116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259218.1;locus_tag=IXO1088_013475;product=response regulator transcription factor;protein_id=QIE16116.1;transl_table=11 CP040687.1 Genbank gene 2779132 2780616 . + . ID=gene-IXO1088_013480;Name=IXO1088_013480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013480 CP040687.1 Protein Homology CDS 2779132 2780616 . + 0 ID=cds-QIE16117.1;Parent=gene-IXO1088_013480;Dbxref=NCBI_GP:QIE16117.1;Name=QIE16117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637298.1;locus_tag=IXO1088_013480;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=QIE16117.1;transl_table=11 CP040687.1 Genbank gene 2780735 2781844 . + . ID=gene-IXO1088_013485;Name=IXO1088_013485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013485 CP040687.1 Protein Homology CDS 2780735 2781844 . + 0 ID=cds-QIE16118.1;Parent=gene-IXO1088_013485;Dbxref=NCBI_GP:QIE16118.1;Name=QIE16118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373650.1;locus_tag=IXO1088_013485;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=QIE16118.1;transl_table=11 CP040687.1 Genbank gene 2781909 2782133 . + . ID=gene-IXO1088_013490;Name=IXO1088_013490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013490 CP040687.1 Protein Homology CDS 2781909 2782133 . + 0 ID=cds-QIE16119.1;Parent=gene-IXO1088_013490;Dbxref=NCBI_GP:QIE16119.1;Name=QIE16119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302780.1;locus_tag=IXO1088_013490;product=acyl carrier protein;protein_id=QIE16119.1;transl_table=11 CP040687.1 Genbank gene 2782139 2783179 . + . ID=gene-IXO1088_013495;Name=IXO1088_013495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013495 CP040687.1 Protein Homology CDS 2782139 2783179 . + 0 ID=cds-QIE16120.1;Parent=gene-IXO1088_013495;Dbxref=NCBI_GP:QIE16120.1;Name=QIE16120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003466860.1;locus_tag=IXO1088_013495;product=ketoacyl-ACP synthase III;protein_id=QIE16120.1;transl_table=11 CP040687.1 Genbank gene 2783176 2783949 . + . ID=gene-IXO1088_013500;Name=IXO1088_013500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013500 CP040687.1 Protein Homology CDS 2783176 2783949 . + 0 ID=cds-QIE16121.1;Parent=gene-IXO1088_013500;Dbxref=NCBI_GP:QIE16121.1;Name=QIE16121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452278.1;locus_tag=IXO1088_013500;product=SDR family oxidoreductase;protein_id=QIE16121.1;transl_table=11 CP040687.1 Genbank gene 2783946 2784698 . + . ID=gene-IXO1088_013505;Name=IXO1088_013505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013505 CP040687.1 Protein Homology CDS 2783946 2784698 . + 0 ID=cds-QIE16122.1;Parent=gene-IXO1088_013505;Dbxref=NCBI_GP:QIE16122.1;Name=QIE16122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302783.1;locus_tag=IXO1088_013505;product=SDR family oxidoreductase;protein_id=QIE16122.1;transl_table=11 CP040687.1 Genbank gene 2784698 2785348 . + . ID=gene-IXO1088_013510;Name=IXO1088_013510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013510 CP040687.1 Protein Homology CDS 2784698 2785348 . + 0 ID=cds-QIE16123.1;Parent=gene-IXO1088_013510;Dbxref=NCBI_GP:QIE16123.1;Name=QIE16123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503303.1;locus_tag=IXO1088_013510;product=acetyltransferase;protein_id=QIE16123.1;transl_table=11 CP040687.1 Genbank gene 2785352 2786497 . + . ID=gene-IXO1088_013515;Name=IXO1088_013515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013515 CP040687.1 Protein Homology CDS 2785352 2786497 . + 0 ID=cds-QIE16124.1;Parent=gene-IXO1088_013515;Dbxref=NCBI_GP:QIE16124.1;Name=QIE16124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380894.1;locus_tag=IXO1088_013515;product=Rieske 2Fe-2S domain-containing protein;protein_id=QIE16124.1;transl_table=11 CP040687.1 Genbank gene 2786487 2787110 . + . ID=gene-IXO1088_013520;Name=IXO1088_013520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013520 CP040687.1 Protein Homology CDS 2786487 2787110 . + 0 ID=cds-QIE16125.1;Parent=gene-IXO1088_013520;Dbxref=NCBI_GP:QIE16125.1;Name=QIE16125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259226.1;locus_tag=IXO1088_013520;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=QIE16125.1;transl_table=11 CP040687.1 Genbank gene 2787107 2788630 . + . ID=gene-IXO1088_013525;Name=IXO1088_013525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013525 CP040687.1 Protein Homology CDS 2787107 2788630 . + 0 ID=cds-QIE16126.1;Parent=gene-IXO1088_013525;Dbxref=NCBI_GP:QIE16126.1;Name=QIE16126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118762.1;locus_tag=IXO1088_013525;product=FkbM family methyltransferase;protein_id=QIE16126.1;transl_table=11 CP040687.1 Genbank gene 2788738 2792289 . + . ID=gene-IXO1088_013530;Name=IXO1088_013530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013530 CP040687.1 Protein Homology CDS 2788738 2792289 . + 0 ID=cds-QIE16127.1;Parent=gene-IXO1088_013530;Dbxref=NCBI_GP:QIE16127.1;Name=QIE16127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259228.1;locus_tag=IXO1088_013530;product=glycosyltransferase;protein_id=QIE16127.1;transl_table=11 CP040687.1 Genbank gene 2792793 2793164 . + . ID=gene-IXO1088_013535;Name=IXO1088_013535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013535 CP040687.1 Protein Homology CDS 2792793 2793164 . + 0 ID=cds-QIE16128.1;Parent=gene-IXO1088_013535;Dbxref=NCBI_GP:QIE16128.1;Name=QIE16128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118760.1;locus_tag=IXO1088_013535;product=hypothetical protein;protein_id=QIE16128.1;transl_table=11 CP040687.1 Genbank gene 2793227 2793544 . + . ID=gene-IXO1088_013540;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=IXO1088_013540 CP040687.1 Protein Homology CDS 2793227 2793544 . + 0 ID=cds-QIE17991.1;Parent=gene-IXO1088_013540;Dbxref=NCBI_GP:QIE17991.1;Name=QIE17991.1;gbkey=CDS;gene=fliE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637292.1;locus_tag=IXO1088_013540;product=flagellar hook-basal body complex protein FliE;protein_id=QIE17991.1;transl_table=11 CP040687.1 Genbank gene 2793558 2795282 . + . ID=gene-IXO1088_013545;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=IXO1088_013545 CP040687.1 Protein Homology CDS 2793558 2795282 . + 0 ID=cds-QIE16129.1;Parent=gene-IXO1088_013545;Dbxref=NCBI_GP:QIE16129.1;Name=QIE16129.1;gbkey=CDS;gene=fliF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637291.1;locus_tag=IXO1088_013545;product=flagellar M-ring protein FliF;protein_id=QIE16129.1;transl_table=11 CP040687.1 Genbank gene 2795293 2796282 . + . ID=gene-IXO1088_013550;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=IXO1088_013550 CP040687.1 Protein Homology CDS 2795293 2796282 . + 0 ID=cds-QIE17992.1;Parent=gene-IXO1088_013550;Dbxref=NCBI_GP:QIE17992.1;Name=QIE17992.1;gbkey=CDS;gene=fliG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637290.1;locus_tag=IXO1088_013550;product=flagellar motor switch protein FliG;protein_id=QIE17992.1;transl_table=11 CP040687.1 Genbank gene 2796279 2796899 . + . ID=gene-IXO1088_013555;Name=IXO1088_013555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013555 CP040687.1 Protein Homology CDS 2796279 2796899 . + 0 ID=cds-QIE16130.1;Parent=gene-IXO1088_013555;Dbxref=NCBI_GP:QIE16130.1;Name=QIE16130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637289.1;locus_tag=IXO1088_013555;product=flagellar assembly protein FliH;protein_id=QIE16130.1;transl_table=11 CP040687.1 Genbank gene 2796896 2798272 . + . ID=gene-IXO1088_013560;Name=IXO1088_013560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013560 CP040687.1 Protein Homology CDS 2796896 2798272 . + 0 ID=cds-QIE16131.1;Parent=gene-IXO1088_013560;Dbxref=NCBI_GP:QIE16131.1;Name=QIE16131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637288.1;locus_tag=IXO1088_013560;product=FliI/YscN family ATPase;protein_id=QIE16131.1;transl_table=11 CP040687.1 Genbank gene 2798276 2798731 . + . ID=gene-IXO1088_013565;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=IXO1088_013565 CP040687.1 Protein Homology CDS 2798276 2798731 . + 0 ID=cds-QIE16132.1;Parent=gene-IXO1088_013565;Dbxref=NCBI_GP:QIE16132.1;Name=QIE16132.1;gbkey=CDS;gene=fliJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637287.1;locus_tag=IXO1088_013565;product=flagellar export protein FliJ;protein_id=QIE16132.1;transl_table=11 CP040687.1 Genbank gene 2798728 2800035 . + . ID=gene-IXO1088_013570;Name=IXO1088_013570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013570 CP040687.1 Protein Homology CDS 2798728 2800035 . + 0 ID=cds-QIE16133.1;Parent=gene-IXO1088_013570;Dbxref=NCBI_GP:QIE16133.1;Name=QIE16133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159589.1;locus_tag=IXO1088_013570;product=flagellar hook-length control protein FliK;protein_id=QIE16133.1;transl_table=11 CP040687.1 Genbank gene 2800227 2800751 . + . ID=gene-IXO1088_013575;Name=IXO1088_013575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013575 CP040687.1 Protein Homology CDS 2800227 2800751 . + 0 ID=cds-QIE16134.1;Parent=gene-IXO1088_013575;Dbxref=NCBI_GP:QIE16134.1;Name=QIE16134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637285.1;locus_tag=IXO1088_013575;product=flagellar basal body protein FliL;protein_id=QIE16134.1;transl_table=11 CP040687.1 Genbank gene 2800762 2801775 . + . ID=gene-IXO1088_013580;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=IXO1088_013580 CP040687.1 Protein Homology CDS 2800762 2801775 . + 0 ID=cds-QIE16135.1;Parent=gene-IXO1088_013580;Dbxref=NCBI_GP:QIE16135.1;Name=QIE16135.1;gbkey=CDS;gene=fliM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637284.1;locus_tag=IXO1088_013580;product=flagellar motor switch protein FliM;protein_id=QIE16135.1;transl_table=11 CP040687.1 Genbank gene 2801772 2802110 . + . ID=gene-IXO1088_013585;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=IXO1088_013585 CP040687.1 Protein Homology CDS 2801772 2802110 . + 0 ID=cds-QIE16136.1;Parent=gene-IXO1088_013585;Dbxref=NCBI_GP:QIE16136.1;Name=QIE16136.1;gbkey=CDS;gene=fliN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637283.1;locus_tag=IXO1088_013585;product=flagellar motor switch protein FliN;protein_id=QIE16136.1;transl_table=11 CP040687.1 Genbank gene 2802107 2802523 . + . ID=gene-IXO1088_013590;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=IXO1088_013590 CP040687.1 Protein Homology CDS 2802107 2802523 . + 0 ID=cds-QIE16137.1;Parent=gene-IXO1088_013590;Dbxref=NCBI_GP:QIE16137.1;Name=QIE16137.1;gbkey=CDS;gene=fliO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637282.1;locus_tag=IXO1088_013590;product=flagellar biosynthetic protein FliO;protein_id=QIE16137.1;transl_table=11 CP040687.1 Genbank gene 2802525 2803370 . + . ID=gene-IXO1088_013595;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=IXO1088_013595 CP040687.1 Protein Homology CDS 2802525 2803370 . + 0 ID=cds-QIE16138.1;Parent=gene-IXO1088_013595;Dbxref=NCBI_GP:QIE16138.1;Name=QIE16138.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;gbkey=CDS;gene=fliP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637281.1;locus_tag=IXO1088_013595;product=flagellar type III secretion system pore protein FliP;protein_id=QIE16138.1;transl_table=11 CP040687.1 Genbank gene 2803520 2803717 . - . ID=gene-IXO1088_013600;Name=IXO1088_013600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013600 CP040687.1 Protein Homology CDS 2803520 2803717 . - 0 ID=cds-QIE16139.1;Parent=gene-IXO1088_013600;Dbxref=NCBI_GP:QIE16139.1;Name=QIE16139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302241.1;locus_tag=IXO1088_013600;product=hypothetical protein;protein_id=QIE16139.1;transl_table=11 CP040687.1 Genbank gene 2803781 2804050 . + . ID=gene-IXO1088_013605;Name=IXO1088_013605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013605 CP040687.1 Protein Homology CDS 2803781 2804050 . + 0 ID=cds-QIE16140.1;Parent=gene-IXO1088_013605;Dbxref=NCBI_GP:QIE16140.1;Name=QIE16140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637280.1;locus_tag=IXO1088_013605;product=flagellar biosynthetic protein FliQ;protein_id=QIE16140.1;transl_table=11 CP040687.1 Genbank gene 2804063 2804854 . + . ID=gene-IXO1088_013610;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=IXO1088_013610 CP040687.1 Protein Homology CDS 2804063 2804854 . + 0 ID=cds-QIE16141.1;Parent=gene-IXO1088_013610;Dbxref=NCBI_GP:QIE16141.1;Name=QIE16141.1;gbkey=CDS;gene=fliR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160558.1;locus_tag=IXO1088_013610;product=flagellar biosynthetic protein FliR;protein_id=QIE16141.1;transl_table=11 CP040687.1 Genbank gene 2804949 2807921 . + . ID=gene-IXO1088_013615;Name=IXO1088_013615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013615 CP040687.1 Protein Homology CDS 2804949 2807921 . + 0 ID=cds-QIE16142.1;Parent=gene-IXO1088_013615;Dbxref=NCBI_GP:QIE16142.1;Name=QIE16142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259242.1;locus_tag=IXO1088_013615;product=diguanylate cyclase;protein_id=QIE16142.1;transl_table=11 CP040687.1 Genbank gene 2808281 2811202 . + . ID=gene-IXO1088_013620;Name=IXO1088_013620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013620 CP040687.1 Protein Homology CDS 2808281 2811202 . + 0 ID=cds-QIE16143.1;Parent=gene-IXO1088_013620;Dbxref=NCBI_GP:QIE16143.1;Name=QIE16143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090104.1;locus_tag=IXO1088_013620;product=diguanylate cyclase;protein_id=QIE16143.1;transl_table=11 CP040687.1 Genbank gene 2811453 2813543 . + . ID=gene-IXO1088_013625;Name=IXO1088_013625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013625 CP040687.1 Protein Homology CDS 2811453 2813543 . + 0 ID=cds-QIE16144.1;Parent=gene-IXO1088_013625;Dbxref=NCBI_GP:QIE16144.1;Name=QIE16144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408691.1;locus_tag=IXO1088_013625;product=EAL domain-containing protein;protein_id=QIE16144.1;transl_table=11 CP040687.1 Genbank gene 2813780 2814910 . + . ID=gene-IXO1088_013630;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=IXO1088_013630 CP040687.1 Protein Homology CDS 2813780 2814910 . + 0 ID=cds-QIE16145.1;Parent=gene-IXO1088_013630;Dbxref=NCBI_GP:QIE16145.1;Name=QIE16145.1;gbkey=CDS;gene=flhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637275.1;locus_tag=IXO1088_013630;product=flagellar biosynthesis protein FlhB;protein_id=QIE16145.1;transl_table=11 CP040687.1 Genbank gene 2814907 2817000 . + . ID=gene-IXO1088_013635;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=IXO1088_013635 CP040687.1 Protein Homology CDS 2814907 2817000 . + 0 ID=cds-QIE16146.1;Parent=gene-IXO1088_013635;Dbxref=NCBI_GP:QIE16146.1;Name=QIE16146.1;gbkey=CDS;gene=flhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637274.1;locus_tag=IXO1088_013635;product=flagellar biosynthesis protein FlhA;protein_id=QIE16146.1;transl_table=11 CP040687.1 Genbank gene 2817585 2819243 . + . ID=gene-IXO1088_013640;Name=flhF;gbkey=Gene;gene=flhF;gene_biotype=protein_coding;locus_tag=IXO1088_013640 CP040687.1 Protein Homology CDS 2817585 2819243 . + 0 ID=cds-QIE16147.1;Parent=gene-IXO1088_013640;Dbxref=NCBI_GP:QIE16147.1;Name=QIE16147.1;gbkey=CDS;gene=flhF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154801.1;locus_tag=IXO1088_013640;product=flagellar biosynthesis protein FlhF;protein_id=QIE16147.1;transl_table=11 CP040687.1 Genbank gene 2819230 2820114 . + . ID=gene-IXO1088_013645;Name=IXO1088_013645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013645 CP040687.1 Protein Homology CDS 2819230 2820114 . + 0 ID=cds-QIE16148.1;Parent=gene-IXO1088_013645;Dbxref=NCBI_GP:QIE16148.1;Name=QIE16148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374294.1;locus_tag=IXO1088_013645;product=MinD/ParA family protein;protein_id=QIE16148.1;transl_table=11 CP040687.1 Genbank gene 2820111 2820866 . + . ID=gene-IXO1088_013650;Name=IXO1088_013650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013650 CP040687.1 Protein Homology CDS 2820111 2820866 . + 0 ID=cds-QIE16149.1;Parent=gene-IXO1088_013650;Dbxref=NCBI_GP:QIE16149.1;Name=QIE16149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259248.1;locus_tag=IXO1088_013650;product=RNA polymerase sigma factor FliA;protein_id=QIE16149.1;transl_table=11 CP040687.1 Genbank gene 2820913 2821293 . + . ID=gene-IXO1088_013655;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=IXO1088_013655 CP040687.1 Protein Homology CDS 2820913 2821293 . + 0 ID=cds-QIE17993.1;Parent=gene-IXO1088_013655;Dbxref=NCBI_GP:QIE17993.1;Name=QIE17993.1;gbkey=CDS;gene=cheY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637270.1;locus_tag=IXO1088_013655;product=chemotaxis protein CheY;protein_id=QIE17993.1;transl_table=11 CP040687.1 Genbank gene 2821293 2821919 . + . ID=gene-IXO1088_013660;Name=IXO1088_013660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013660 CP040687.1 Protein Homology CDS 2821293 2821919 . + 0 ID=cds-QIE16150.1;Parent=gene-IXO1088_013660;Dbxref=NCBI_GP:QIE16150.1;Name=QIE16150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637269.1;locus_tag=IXO1088_013660;product=protein phosphatase CheZ;protein_id=QIE16150.1;transl_table=11 CP040687.1 Genbank gene 2821922 2823580 . + . ID=gene-IXO1088_013665;Name=IXO1088_013665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013665 CP040687.1 Protein Homology CDS 2821922 2823580 . + 0 ID=cds-QIE16151.1;Parent=gene-IXO1088_013665;Dbxref=NCBI_GP:QIE16151.1;Name=QIE16151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637268.1;locus_tag=IXO1088_013665;product=chemotaxis protein CheA;protein_id=QIE16151.1;transl_table=11 CP040687.1 Genbank pseudogene 2823494 2823705 . - . ID=gene-IXO1088_013670;Name=IXO1088_013670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_013670;pseudo=true CP040687.1 Protein Homology CDS 2823494 2823705 . - 0 ID=cds-IXO1088_013670;Parent=gene-IXO1088_013670;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051232.1;locus_tag=IXO1088_013670;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2823818 2823955 . + . ID=gene-IXO1088_013675;Name=IXO1088_013675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_013675;pseudo=true CP040687.1 Protein Homology CDS 2823818 2823955 . + 0 ID=cds-IXO1088_013675;Parent=gene-IXO1088_013675;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041183487.1;locus_tag=IXO1088_013675;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2824004 2824678 . + . ID=gene-IXO1088_013680;Name=IXO1088_013680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_013680;pseudo=true CP040687.1 Protein Homology CDS 2824004 2824678 . + 0 ID=cds-IXO1088_013680;Parent=gene-IXO1088_013680;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503735.1;locus_tag=IXO1088_013680;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2824770 2825726 . + . ID=gene-IXO1088_013685;Name=IXO1088_013685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013685 CP040687.1 Protein Homology CDS 2824770 2825726 . + 0 ID=cds-QIE16152.1;Parent=gene-IXO1088_013685;Dbxref=NCBI_GP:QIE16152.1;Name=QIE16152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1088_013685;product=IS30-like element IS1112b family transposase;protein_id=QIE16152.1;transl_table=11 CP040687.1 Genbank gene 2825701 2825991 . - . ID=gene-IXO1088_013690;Name=IXO1088_013690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013690 CP040687.1 GeneMarkS-2+ CDS 2825701 2825991 . - 0 ID=cds-QIE16153.1;Parent=gene-IXO1088_013690;Dbxref=NCBI_GP:QIE16153.1;Name=QIE16153.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_013690;product=hypothetical protein;protein_id=QIE16153.1;transl_table=11 CP040687.1 Genbank gene 2826002 2826370 . - . ID=gene-IXO1088_013695;Name=IXO1088_013695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013695 CP040687.1 Protein Homology CDS 2826002 2826370 . - 0 ID=cds-QIE16154.1;Parent=gene-IXO1088_013695;Dbxref=NCBI_GP:QIE16154.1;Name=QIE16154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010523358.1;locus_tag=IXO1088_013695;product=hypothetical protein;protein_id=QIE16154.1;transl_table=11 CP040687.1 Genbank pseudogene 2826458 2827772 . + . ID=gene-IXO1088_013700;Name=IXO1088_013700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_013700;pseudo=true CP040687.1 Protein Homology CDS 2826458 2827772 . + 0 ID=cds-IXO1088_013700;Parent=gene-IXO1088_013700;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_013700;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2828158 2832195 . - . ID=gene-IXO1088_013705;Name=IXO1088_013705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013705 CP040687.1 Protein Homology CDS 2828158 2832195 . - 0 ID=cds-QIE17994.1;Parent=gene-IXO1088_013705;Dbxref=NCBI_GP:QIE17994.1;Name=QIE17994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445089.1;locus_tag=IXO1088_013705;product=type IV secretion protein Rhs;protein_id=QIE17994.1;transl_table=11 CP040687.1 Genbank gene 2833470 2838440 . - . ID=gene-IXO1088_013710;Name=IXO1088_013710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013710 CP040687.1 Protein Homology CDS 2833470 2838440 . - 0 ID=cds-QIE16155.1;Parent=gene-IXO1088_013710;Dbxref=NCBI_GP:QIE16155.1;Name=QIE16155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445090.1;locus_tag=IXO1088_013710;product=glutamate synthase;protein_id=QIE16155.1;transl_table=11 CP040687.1 Genbank gene 2838531 2839487 . - . ID=gene-IXO1088_013715;Name=IXO1088_013715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013715 CP040687.1 Protein Homology CDS 2838531 2839487 . - 0 ID=cds-QIE16156.1;Parent=gene-IXO1088_013715;Dbxref=NCBI_GP:QIE16156.1;Name=QIE16156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1088_013715;product=IS30-like element IS1112b family transposase;protein_id=QIE16156.1;transl_table=11 CP040687.1 Genbank pseudogene 2839590 2840186 . + . ID=gene-IXO1088_013720;Name=IXO1088_013720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_013720;pseudo=true CP040687.1 Protein Homology CDS 2839590 2840186 . + 0 ID=cds-IXO1088_013720;Parent=gene-IXO1088_013720;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257112.1;locus_tag=IXO1088_013720;product=methylamine utilization protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2840303 2841778 . + . ID=gene-IXO1088_013725;Name=IXO1088_013725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013725 CP040687.1 Protein Homology CDS 2840303 2841778 . + 0 ID=cds-QIE16157.1;Parent=gene-IXO1088_013725;Dbxref=NCBI_GP:QIE16157.1;Name=QIE16157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1088_013725;product=IS5 family transposase;protein_id=QIE16157.1;transl_table=11 CP040687.1 Genbank pseudogene 2841794 2842252 . + . ID=gene-IXO1088_013730;Name=IXO1088_013730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_013730;pseudo=true CP040687.1 Protein Homology CDS 2841794 2842252 . + 0 ID=cds-IXO1088_013730;Parent=gene-IXO1088_013730;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449750.1;locus_tag=IXO1088_013730;product=methylamine utilization protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2842272 2842751 . - . ID=gene-IXO1088_013735;Name=IXO1088_013735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013735 CP040687.1 GeneMarkS-2+ CDS 2842272 2842751 . - 0 ID=cds-QIE16158.1;Parent=gene-IXO1088_013735;Dbxref=NCBI_GP:QIE16158.1;Name=QIE16158.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_013735;product=hypothetical protein;protein_id=QIE16158.1;transl_table=11 CP040687.1 Genbank pseudogene 2842960 2846028 . - . ID=gene-IXO1088_013740;Name=IXO1088_013740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_013740;pseudo=true CP040687.1 Protein Homology CDS 2842960 2846028 . - 0 ID=cds-IXO1088_013740;Parent=gene-IXO1088_013740;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503513.1;locus_tag=IXO1088_013740;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2846025 2849550 . - . ID=gene-IXO1088_013745;Name=IXO1088_013745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_013745;pseudo=true CP040687.1 Protein Homology CDS 2846025 2849550 . - 0 ID=cds-IXO1088_013745;Parent=gene-IXO1088_013745;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482800.1;locus_tag=IXO1088_013745;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2849547 2850662 . - . ID=gene-IXO1088_013750;Name=IXO1088_013750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_013750;pseudo=true CP040687.1 Protein Homology CDS 2849547 2850662 . - 0 ID=cds-IXO1088_013750;Parent=gene-IXO1088_013750;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482801.1;locus_tag=IXO1088_013750;product=efflux RND transporter periplasmic adaptor subunit;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2850885 2851277 . + . ID=gene-IXO1088_013755;Name=IXO1088_013755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013755 CP040687.1 Protein Homology CDS 2850885 2851277 . + 0 ID=cds-QIE16159.1;Parent=gene-IXO1088_013755;Dbxref=NCBI_GP:QIE16159.1;Name=QIE16159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637505.2;locus_tag=IXO1088_013755;product=c-type cytochrome;protein_id=QIE16159.1;transl_table=11 CP040687.1 Genbank gene 2851286 2851747 . + . ID=gene-IXO1088_013760;Name=IXO1088_013760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013760 CP040687.1 Protein Homology CDS 2851286 2851747 . + 0 ID=cds-QIE16160.1;Parent=gene-IXO1088_013760;Dbxref=NCBI_GP:QIE16160.1;Name=QIE16160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009602450.1;locus_tag=IXO1088_013760;product=cytochrome c;protein_id=QIE16160.1;transl_table=11 CP040687.1 Genbank gene 2851840 2851915 . + . ID=gene-IXO1088_013765;Name=IXO1088_013765;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_013765 CP040687.1 tRNAscan-SE tRNA 2851840 2851915 . + . ID=rna-IXO1088_013765;Parent=gene-IXO1088_013765;anticodon=(pos:2851873..2851875);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_013765;product=tRNA-Ala CP040687.1 tRNAscan-SE exon 2851840 2851915 . + . ID=exon-IXO1088_013765-1;Parent=rna-IXO1088_013765;anticodon=(pos:2851873..2851875);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_013765;product=tRNA-Ala CP040687.1 Genbank gene 2851963 2852038 . + . ID=gene-IXO1088_013770;Name=IXO1088_013770;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_013770 CP040687.1 tRNAscan-SE tRNA 2851963 2852038 . + . ID=rna-IXO1088_013770;Parent=gene-IXO1088_013770;anticodon=(pos:2851997..2851999);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_013770;product=tRNA-Glu CP040687.1 tRNAscan-SE exon 2851963 2852038 . + . ID=exon-IXO1088_013770-1;Parent=rna-IXO1088_013770;anticodon=(pos:2851997..2851999);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_013770;product=tRNA-Glu CP040687.1 Genbank gene 2852252 2852512 . - . ID=gene-IXO1088_013775;Name=IXO1088_013775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013775 CP040687.1 Protein Homology CDS 2852252 2852512 . - 0 ID=cds-QIE16161.1;Parent=gene-IXO1088_013775;Dbxref=NCBI_GP:QIE16161.1;Name=QIE16161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303437.1;locus_tag=IXO1088_013775;product=hypothetical protein;protein_id=QIE16161.1;transl_table=11 CP040687.1 Genbank gene 2852588 2852830 . - . ID=gene-IXO1088_013780;Name=IXO1088_013780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013780 CP040687.1 Protein Homology CDS 2852588 2852830 . - 0 ID=cds-QIE16162.1;Parent=gene-IXO1088_013780;Dbxref=NCBI_GP:QIE16162.1;Name=QIE16162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347439.1;locus_tag=IXO1088_013780;product=hypothetical protein;protein_id=QIE16162.1;transl_table=11 CP040687.1 Genbank gene 2852798 2852873 . + . ID=gene-IXO1088_013785;Name=IXO1088_013785;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_013785 CP040687.1 tRNAscan-SE tRNA 2852798 2852873 . + . ID=rna-IXO1088_013785;Parent=gene-IXO1088_013785;anticodon=(pos:2852831..2852833);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_013785;product=tRNA-Ala CP040687.1 tRNAscan-SE exon 2852798 2852873 . + . ID=exon-IXO1088_013785-1;Parent=rna-IXO1088_013785;anticodon=(pos:2852831..2852833);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_013785;product=tRNA-Ala CP040687.1 Genbank gene 2852921 2852996 . + . ID=gene-IXO1088_013790;Name=IXO1088_013790;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_013790 CP040687.1 tRNAscan-SE tRNA 2852921 2852996 . + . ID=rna-IXO1088_013790;Parent=gene-IXO1088_013790;anticodon=(pos:2852955..2852957);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_013790;product=tRNA-Glu CP040687.1 tRNAscan-SE exon 2852921 2852996 . + . ID=exon-IXO1088_013790-1;Parent=rna-IXO1088_013790;anticodon=(pos:2852955..2852957);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_013790;product=tRNA-Glu CP040687.1 Genbank gene 2854270 2855235 . + . ID=gene-IXO1088_013795;Name=IXO1088_013795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013795 CP040687.1 Protein Homology CDS 2854270 2855235 . + 0 ID=cds-QIE16163.1;Parent=gene-IXO1088_013795;Dbxref=NCBI_GP:QIE16163.1;Name=QIE16163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_013795;product=IS1595-like element ISXo5 family transposase;protein_id=QIE16163.1;transl_table=11 CP040687.1 Genbank gene 2855242 2856540 . + . ID=gene-IXO1088_013800;Name=IXO1088_013800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013800 CP040687.1 Protein Homology CDS 2855242 2856540 . + 0 ID=cds-QIE16164.1;Parent=gene-IXO1088_013800;Dbxref=NCBI_GP:QIE16164.1;Name=QIE16164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444745.1;locus_tag=IXO1088_013800;product=IS701 family transposase;protein_id=QIE16164.1;transl_table=11 CP040687.1 Genbank gene 2856709 2858394 . - . ID=gene-IXO1088_013805;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=IXO1088_013805 CP040687.1 Protein Homology CDS 2856709 2858394 . - 0 ID=cds-QIE16165.1;Parent=gene-IXO1088_013805;Dbxref=NCBI_GP:QIE16165.1;Name=QIE16165.1;gbkey=CDS;gene=cydC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010382245.1;locus_tag=IXO1088_013805;product=thiol reductant ABC exporter subunit CydC;protein_id=QIE16165.1;transl_table=11 CP040687.1 Genbank gene 2858391 2860127 . - . ID=gene-IXO1088_013810;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=IXO1088_013810 CP040687.1 Protein Homology CDS 2858391 2860127 . - 0 ID=cds-QIE17995.1;Parent=gene-IXO1088_013810;Dbxref=NCBI_GP:QIE17995.1;Name=QIE17995.1;gbkey=CDS;gene=cydD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160357.1;locus_tag=IXO1088_013810;product=thiol reductant ABC exporter subunit CydD;protein_id=QIE17995.1;transl_table=11 CP040687.1 Genbank gene 2860279 2861379 . + . ID=gene-IXO1088_013815;Name=IXO1088_013815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013815 CP040687.1 Protein Homology CDS 2860279 2861379 . + 0 ID=cds-QIE17996.1;Parent=gene-IXO1088_013815;Dbxref=NCBI_GP:QIE17996.1;Name=QIE17996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503617.1;locus_tag=IXO1088_013815;product=cytochrome D ubiquinol oxidase subunit I;protein_id=QIE17996.1;transl_table=11 CP040687.1 Genbank gene 2861428 2861691 . + . ID=gene-IXO1088_013820;Name=IXO1088_013820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013820 CP040687.1 Protein Homology CDS 2861428 2861691 . + 0 ID=cds-QIE16166.1;Parent=gene-IXO1088_013820;Dbxref=NCBI_GP:QIE16166.1;Name=QIE16166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503618.1;locus_tag=IXO1088_013820;product=cytochrome D ubiquinol oxidase subunit I;protein_id=QIE16166.1;transl_table=11 CP040687.1 Genbank pseudogene 2861740 2861922 . + . ID=gene-IXO1088_013825;Name=IXO1088_013825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_013825;pseudo=true CP040687.1 Protein Homology CDS 2861740 2861922 . + 0 ID=cds-IXO1088_013825;Parent=gene-IXO1088_013825;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637589.1;locus_tag=IXO1088_013825;product=cytochrome D ubiquinol oxidase subunit II;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2862070 2862180 . + . ID=gene-IXO1088_013830;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=IXO1088_013830 CP040687.1 Protein Homology CDS 2862070 2862180 . + 0 ID=cds-QIE16167.1;Parent=gene-IXO1088_013830;Dbxref=NCBI_GP:QIE16167.1;Name=QIE16167.1;gbkey=CDS;gene=cydX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573380.1;locus_tag=IXO1088_013830;product=cytochrome bd-I oxidase subunit CydX;protein_id=QIE16167.1;transl_table=11 CP040687.1 Genbank gene 2862240 2862316 . + . ID=gene-IXO1088_013835;Name=IXO1088_013835;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_013835 CP040687.1 tRNAscan-SE tRNA 2862240 2862316 . + . ID=rna-IXO1088_013835;Parent=gene-IXO1088_013835;anticodon=(pos:2862274..2862276);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_013835;product=tRNA-Pro CP040687.1 tRNAscan-SE exon 2862240 2862316 . + . ID=exon-IXO1088_013835-1;Parent=rna-IXO1088_013835;anticodon=(pos:2862274..2862276);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_013835;product=tRNA-Pro CP040687.1 Genbank gene 2862401 2863666 . + . ID=gene-IXO1088_013840;Name=IXO1088_013840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013840 CP040687.1 Protein Homology CDS 2862401 2863666 . + 0 ID=cds-QIE16168.1;Parent=gene-IXO1088_013840;Dbxref=NCBI_GP:QIE16168.1;Name=QIE16168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637591.1;locus_tag=IXO1088_013840;product=MFS transporter;protein_id=QIE16168.1;transl_table=11 CP040687.1 Genbank gene 2863647 2865560 . - . ID=gene-IXO1088_013845;Name=IXO1088_013845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013845 CP040687.1 Protein Homology CDS 2863647 2865560 . - 0 ID=cds-QIE16169.1;Parent=gene-IXO1088_013845;Dbxref=NCBI_GP:QIE16169.1;Name=QIE16169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259272.1;locus_tag=IXO1088_013845;product=CocE/NonD family hydrolase;protein_id=QIE16169.1;transl_table=11 CP040687.1 Genbank gene 2865928 2867172 . - . ID=gene-IXO1088_013850;Name=IXO1088_013850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013850 CP040687.1 Protein Homology CDS 2865928 2867172 . - 0 ID=cds-QIE17997.1;Parent=gene-IXO1088_013850;Dbxref=NCBI_GP:QIE17997.1;Name=QIE17997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637593.1;locus_tag=IXO1088_013850;product=glutamate-5-semialdehyde dehydrogenase;protein_id=QIE17997.1;transl_table=11 CP040687.1 Genbank gene 2867358 2868512 . - . ID=gene-IXO1088_013855;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=IXO1088_013855 CP040687.1 Protein Homology CDS 2867358 2868512 . - 0 ID=cds-QIE16170.1;Parent=gene-IXO1088_013855;Dbxref=NCBI_GP:QIE16170.1;Name=QIE16170.1;gbkey=CDS;gene=proB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300034.1;locus_tag=IXO1088_013855;product=glutamate 5-kinase;protein_id=QIE16170.1;transl_table=11 CP040687.1 Genbank gene 2868526 2868786 . - . ID=gene-IXO1088_013860;Name=IXO1088_013860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013860 CP040687.1 Protein Homology CDS 2868526 2868786 . - 0 ID=cds-QIE16171.1;Parent=gene-IXO1088_013860;Dbxref=NCBI_GP:QIE16171.1;Name=QIE16171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347701.1;locus_tag=IXO1088_013860;product=hypothetical protein;protein_id=QIE16171.1;transl_table=11 CP040687.1 Genbank gene 2868786 2869154 . - . ID=gene-IXO1088_013865;Name=IXO1088_013865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013865 CP040687.1 Protein Homology CDS 2868786 2869154 . - 0 ID=cds-QIE16172.1;Parent=gene-IXO1088_013865;Dbxref=NCBI_GP:QIE16172.1;Name=QIE16172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637596.1;locus_tag=IXO1088_013865;product=cupin domain-containing protein;protein_id=QIE16172.1;transl_table=11 CP040687.1 Genbank gene 2869151 2870446 . - . ID=gene-IXO1088_013870;Name=IXO1088_013870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013870 CP040687.1 Protein Homology CDS 2869151 2870446 . - 0 ID=cds-QIE16173.1;Parent=gene-IXO1088_013870;Dbxref=NCBI_GP:QIE16173.1;Name=QIE16173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637597.1;locus_tag=IXO1088_013870;product=argininosuccinate lyase;protein_id=QIE16173.1;transl_table=11 CP040687.1 Genbank gene 2870570 2871520 . - . ID=gene-IXO1088_013875;Name=IXO1088_013875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013875 CP040687.1 Protein Homology CDS 2870570 2871520 . - 0 ID=cds-QIE16174.1;Parent=gene-IXO1088_013875;Dbxref=NCBI_GP:QIE16174.1;Name=QIE16174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637598.1;locus_tag=IXO1088_013875;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=QIE16174.1;transl_table=11 CP040687.1 Genbank pseudogene 2871517 2872127 . - . ID=gene-IXO1088_013880;Name=IXO1088_013880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_013880;pseudo=true CP040687.1 Protein Homology CDS 2871517 2872127 . - 0 ID=cds-IXO1088_013880;Parent=gene-IXO1088_013880;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010382263.1;locus_tag=IXO1088_013880;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2872133 2873476 . - . ID=gene-IXO1088_013885;Name=IXO1088_013885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013885 CP040687.1 Protein Homology CDS 2872133 2873476 . - 0 ID=cds-QIE16175.1;Parent=gene-IXO1088_013885;Dbxref=NCBI_GP:QIE16175.1;Name=QIE16175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637600.1;locus_tag=IXO1088_013885;product=acetylglutamate kinase;protein_id=QIE16175.1;transl_table=11 CP040687.1 Genbank gene 2873516 2874616 . - . ID=gene-IXO1088_013890;Name=IXO1088_013890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013890 CP040687.1 Protein Homology CDS 2873516 2874616 . - 0 ID=cds-QIE16176.1;Parent=gene-IXO1088_013890;Dbxref=NCBI_GP:QIE16176.1;Name=QIE16176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637601.1;locus_tag=IXO1088_013890;product=acetylornithine deacetylase;protein_id=QIE16176.1;transl_table=11 CP040687.1 Genbank gene 2874609 2875061 . - . ID=gene-IXO1088_013895;Name=IXO1088_013895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013895 CP040687.1 Protein Homology CDS 2874609 2875061 . - 0 ID=cds-QIE16177.1;Parent=gene-IXO1088_013895;Dbxref=NCBI_GP:QIE16177.1;Name=QIE16177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913114.1;locus_tag=IXO1088_013895;product=GNAT family N-acetyltransferase;protein_id=QIE16177.1;transl_table=11 CP040687.1 Genbank gene 2875303 2876544 . - . ID=gene-IXO1088_013900;Name=IXO1088_013900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013900 CP040687.1 Protein Homology CDS 2875303 2876544 . - 0 ID=cds-QIE16178.1;Parent=gene-IXO1088_013900;Dbxref=NCBI_GP:QIE16178.1;Name=QIE16178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300041.1;locus_tag=IXO1088_013900;product=argininosuccinate synthase;protein_id=QIE16178.1;transl_table=11 CP040687.1 Genbank gene 2876616 2877641 . - . ID=gene-IXO1088_013905;Name=IXO1088_013905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013905 CP040687.1 Protein Homology CDS 2876616 2877641 . - 0 ID=cds-QIE16179.1;Parent=gene-IXO1088_013905;Dbxref=NCBI_GP:QIE16179.1;Name=QIE16179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503633.1;locus_tag=IXO1088_013905;product=N-acetylornithine carbamoyltransferase;protein_id=QIE16179.1;transl_table=11 CP040687.1 Genbank gene 2877954 2878448 . - . ID=gene-IXO1088_013910;Name=IXO1088_013910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013910 CP040687.1 Protein Homology CDS 2877954 2878448 . - 0 ID=cds-QIE17998.1;Parent=gene-IXO1088_013910;Dbxref=NCBI_GP:QIE17998.1;Name=QIE17998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114649.1;locus_tag=IXO1088_013910;product=hypothetical protein;protein_id=QIE17998.1;transl_table=11 CP040687.1 Genbank gene 2878619 2880049 . + . ID=gene-IXO1088_013915;Name=IXO1088_013915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013915 CP040687.1 Protein Homology CDS 2878619 2880049 . + 0 ID=cds-QIE16180.1;Parent=gene-IXO1088_013915;Dbxref=NCBI_GP:QIE16180.1;Name=QIE16180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637606.1;locus_tag=IXO1088_013915;product=cysteine--tRNA ligase;protein_id=QIE16180.1;transl_table=11 CP040687.1 Genbank gene 2880547 2880984 . + . ID=gene-IXO1088_013920;Name=IXO1088_013920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013920 CP040687.1 Protein Homology CDS 2880547 2880984 . + 0 ID=cds-QIE16181.1;Parent=gene-IXO1088_013920;Dbxref=NCBI_GP:QIE16181.1;Name=QIE16181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159960.1;locus_tag=IXO1088_013920;product=SufE family protein;protein_id=QIE16181.1;transl_table=11 CP040687.1 Genbank gene 2880981 2882231 . + . ID=gene-IXO1088_013925;Name=IXO1088_013925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013925 CP040687.1 Protein Homology CDS 2880981 2882231 . + 0 ID=cds-QIE16182.1;Parent=gene-IXO1088_013925;Dbxref=NCBI_GP:QIE16182.1;Name=QIE16182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637608.1;locus_tag=IXO1088_013925;product=MFS transporter;protein_id=QIE16182.1;transl_table=11 CP040687.1 Genbank gene 2882299 2883360 . - . ID=gene-IXO1088_013930;Name=IXO1088_013930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013930 CP040687.1 Protein Homology CDS 2882299 2883360 . - 0 ID=cds-QIE16183.1;Parent=gene-IXO1088_013930;Dbxref=NCBI_GP:QIE16183.1;Name=QIE16183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259288.1;locus_tag=IXO1088_013930;product=S41 family peptidase;protein_id=QIE16183.1;transl_table=11 CP040687.1 Genbank gene 2883503 2884531 . - . ID=gene-IXO1088_013935;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=IXO1088_013935 CP040687.1 Protein Homology CDS 2883503 2884531 . - 0 ID=cds-QIE16184.1;Parent=gene-IXO1088_013935;Dbxref=NCBI_GP:QIE16184.1;Name=QIE16184.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637610.2;locus_tag=IXO1088_013935;product=RNA polymerase-binding protein DksA;protein_id=QIE16184.1;transl_table=11 CP040687.1 Genbank gene 2884622 2884903 . + . ID=gene-IXO1088_013940;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=IXO1088_013940 CP040687.1 Protein Homology CDS 2884622 2884903 . + 0 ID=cds-QIE17999.1;Parent=gene-IXO1088_013940;Dbxref=NCBI_GP:QIE17999.1;Name=QIE17999.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637611.1;locus_tag=IXO1088_013940;product=membrane protein insertion efficiency factor YidD;protein_id=QIE17999.1;transl_table=11 CP040687.1 Genbank gene 2884900 2886249 . + . ID=gene-IXO1088_013945;Name=IXO1088_013945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013945 CP040687.1 Protein Homology CDS 2884900 2886249 . + 0 ID=cds-QIE16185.1;Parent=gene-IXO1088_013945;Dbxref=NCBI_GP:QIE16185.1;Name=QIE16185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637612.1;locus_tag=IXO1088_013945;product=dihydroorotase;protein_id=QIE16185.1;transl_table=11 CP040687.1 Genbank gene 2886189 2887088 . + . ID=gene-IXO1088_013950;Name=IXO1088_013950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013950 CP040687.1 Protein Homology CDS 2886189 2887088 . + 0 ID=cds-QIE16186.1;Parent=gene-IXO1088_013950;Dbxref=NCBI_GP:QIE16186.1;Name=QIE16186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637613.1;locus_tag=IXO1088_013950;product=M23 family metallopeptidase;protein_id=QIE16186.1;transl_table=11 CP040687.1 Genbank pseudogene 2887436 2887908 . + . ID=gene-IXO1088_013955;Name=IXO1088_013955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_013955;pseudo=true CP040687.1 Protein Homology CDS 2887436 2887908 . + 0 ID=cds-IXO1088_013955;Parent=gene-IXO1088_013955;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156117.1;locus_tag=IXO1088_013955;product=ethanolamine ammonia-lyase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2887963 2888226 . - . ID=gene-IXO1088_013960;Name=IXO1088_013960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013960 CP040687.1 Protein Homology CDS 2887963 2888226 . - 0 ID=cds-QIE16187.1;Parent=gene-IXO1088_013960;Dbxref=NCBI_GP:QIE16187.1;Name=QIE16187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259294.1;locus_tag=IXO1088_013960;product=hypothetical protein;protein_id=QIE16187.1;transl_table=11 CP040687.1 Genbank gene 2888598 2889086 . - . ID=gene-IXO1088_013965;Name=IXO1088_013965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013965 CP040687.1 Protein Homology CDS 2888598 2889086 . - 0 ID=cds-QIE18000.1;Parent=gene-IXO1088_013965;Dbxref=NCBI_GP:QIE18000.1;Name=QIE18000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637619.1;locus_tag=IXO1088_013965;product=general stress protein;protein_id=QIE18000.1;transl_table=11 CP040687.1 Genbank pseudogene 2889224 2889364 . - . ID=gene-IXO1088_013970;Name=IXO1088_013970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_013970;pseudo=true CP040687.1 Protein Homology CDS 2889224 2889364 . - 0 ID=cds-IXO1088_013970;Parent=gene-IXO1088_013970;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409568.1;locus_tag=IXO1088_013970;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2889310 2890629 . - . ID=gene-IXO1088_013975;Name=IXO1088_013975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013975 CP040687.1 Protein Homology CDS 2889310 2890629 . - 0 ID=cds-QIE16188.1;Parent=gene-IXO1088_013975;Dbxref=NCBI_GP:QIE16188.1;Name=QIE16188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_013975;product=IS701 family transposase;protein_id=QIE16188.1;transl_table=11 CP040687.1 Genbank gene 2890766 2891734 . + . ID=gene-IXO1088_013980;Name=IXO1088_013980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013980 CP040687.1 Protein Homology CDS 2890766 2891734 . + 0 ID=cds-QIE16189.1;Parent=gene-IXO1088_013980;Dbxref=NCBI_GP:QIE16189.1;Name=QIE16189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_013980;product=IS5-like element ISXo1 family transposase;protein_id=QIE16189.1;transl_table=11 CP040687.1 Genbank pseudogene 2891934 2892677 . + . ID=gene-IXO1088_013985;Name=IXO1088_013985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_013985;pseudo=true CP040687.1 Protein Homology CDS 2891934 2892677 . + 0 ID=cds-IXO1088_013985;Parent=gene-IXO1088_013985;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_013985;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2892719 2893517 . + . ID=gene-IXO1088_013990;Name=IXO1088_013990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_013990 CP040687.1 Protein Homology CDS 2892719 2892990 . + 0 ID=cds-QIE16190.1;Parent=gene-IXO1088_013990;Dbxref=NCBI_GP:QIE16190.1;Name=QIE16190.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_013990;product=IS5 family transposase;protein_id=QIE16190.1;transl_table=11 CP040687.1 Protein Homology CDS 2892989 2893517 . + 1 ID=cds-QIE16190.1;Parent=gene-IXO1088_013990;Dbxref=NCBI_GP:QIE16190.1;Name=QIE16190.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_013990;product=IS5 family transposase;protein_id=QIE16190.1;transl_table=11 CP040687.1 Genbank pseudogene 2893527 2894102 . + . ID=gene-IXO1088_013995;Name=IXO1088_013995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_013995;pseudo=true CP040687.1 Protein Homology CDS 2893527 2894102 . + 0 ID=cds-IXO1088_013995;Parent=gene-IXO1088_013995;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_013995;product=IS701-like element ISXo15 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2894462 2895643 . + . ID=gene-IXO1088_014000;Name=IXO1088_014000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014000 CP040687.1 Protein Homology CDS 2894462 2895643 . + 0 ID=cds-QIE16191.1;Parent=gene-IXO1088_014000;Dbxref=NCBI_GP:QIE16191.1;Name=QIE16191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444725.1;locus_tag=IXO1088_014000;product=putative acyl-CoA thioester hydrolase;protein_id=QIE16191.1;transl_table=11 CP040687.1 Genbank pseudogene 2896056 2897010 . - . ID=gene-IXO1088_014005;Name=IXO1088_014005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014005;pseudo=true CP040687.1 Protein Homology CDS 2896056 2897010 . - 0 ID=cds-IXO1088_014005;Parent=gene-IXO1088_014005;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_082322974.1;locus_tag=IXO1088_014005;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2897228 2898898 . + . ID=gene-IXO1088_014010;Name=IXO1088_014010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014010 CP040687.1 Protein Homology CDS 2897228 2898898 . + 0 ID=cds-QIE16192.1;Parent=gene-IXO1088_014010;Dbxref=NCBI_GP:QIE16192.1;Name=QIE16192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637621.1;locus_tag=IXO1088_014010;product=glycoside hydrolase family 28 protein;protein_id=QIE16192.1;transl_table=11 CP040687.1 Genbank gene 2899115 2899804 . - . ID=gene-IXO1088_014015;Name=IXO1088_014015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014015 CP040687.1 Protein Homology CDS 2899115 2899804 . - 0 ID=cds-QIE16193.1;Parent=gene-IXO1088_014015;Dbxref=NCBI_GP:QIE16193.1;Name=QIE16193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637622.1;locus_tag=IXO1088_014015;product=phytoene/squalene synthase family protein;protein_id=QIE16193.1;transl_table=11 CP040687.1 Genbank gene 2899833 2900537 . - . ID=gene-IXO1088_014020;Name=IXO1088_014020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014020 CP040687.1 Protein Homology CDS 2899833 2900537 . - 0 ID=cds-QIE16194.1;Parent=gene-IXO1088_014020;Dbxref=NCBI_GP:QIE16194.1;Name=QIE16194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408736.1;locus_tag=IXO1088_014020;product=phosphoglycolate phosphatase;protein_id=QIE16194.1;transl_table=11 CP040687.1 Genbank gene 2900611 2901330 . - . ID=gene-IXO1088_014025;Name=IXO1088_014025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014025 CP040687.1 Protein Homology CDS 2900611 2901330 . - 0 ID=cds-QIE16195.1;Parent=gene-IXO1088_014025;Dbxref=NCBI_GP:QIE16195.1;Name=QIE16195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637624.1;locus_tag=IXO1088_014025;product=bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase;protein_id=QIE16195.1;transl_table=11 CP040687.1 Genbank gene 2901361 2902710 . - . ID=gene-IXO1088_014030;Name=IXO1088_014030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014030 CP040687.1 Protein Homology CDS 2901361 2902710 . - 0 ID=cds-QIE16196.1;Parent=gene-IXO1088_014030;Dbxref=NCBI_GP:QIE16196.1;Name=QIE16196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637625.1;locus_tag=IXO1088_014030;product=TRZ/ATZ family hydrolase;protein_id=QIE16196.1;transl_table=11 CP040687.1 Genbank gene 2902718 2903554 . - . ID=gene-IXO1088_014035;Name=IXO1088_014035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014035 CP040687.1 Protein Homology CDS 2902718 2903554 . - 0 ID=cds-QIE18001.1;Parent=gene-IXO1088_014035;Dbxref=NCBI_GP:QIE18001.1;Name=QIE18001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637626.1;locus_tag=IXO1088_014035;product=hypothetical protein;protein_id=QIE18001.1;transl_table=11 CP040687.1 Genbank gene 2903713 2904279 . - . ID=gene-IXO1088_014040;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=IXO1088_014040 CP040687.1 Protein Homology CDS 2903713 2904279 . - 0 ID=cds-QIE16197.1;Parent=gene-IXO1088_014040;Dbxref=NCBI_GP:QIE16197.1;Name=QIE16197.1;gbkey=CDS;gene=efp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637627.1;locus_tag=IXO1088_014040;product=elongation factor P;protein_id=QIE16197.1;transl_table=11 CP040687.1 Genbank gene 2904381 2905409 . + . ID=gene-IXO1088_014045;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=IXO1088_014045 CP040687.1 Protein Homology CDS 2904381 2905409 . + 0 ID=cds-QIE16198.1;Parent=gene-IXO1088_014045;Dbxref=NCBI_GP:QIE16198.1;Name=QIE16198.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637628.1;locus_tag=IXO1088_014045;product=EF-P beta-lysylation protein EpmB;protein_id=QIE16198.1;transl_table=11 CP040687.1 Genbank gene 2905628 2907745 . - . ID=gene-IXO1088_014050;Name=IXO1088_014050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014050 CP040687.1 Protein Homology CDS 2905628 2907745 . - 0 ID=cds-QIE16199.1;Parent=gene-IXO1088_014050;Dbxref=NCBI_GP:QIE16199.1;Name=QIE16199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637629.1;locus_tag=IXO1088_014050;product=EAL domain-containing protein;protein_id=QIE16199.1;transl_table=11 CP040687.1 Genbank gene 2907742 2908662 . - . ID=gene-IXO1088_014055;Name=IXO1088_014055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014055 CP040687.1 Protein Homology CDS 2907742 2908662 . - 0 ID=cds-QIE16200.1;Parent=gene-IXO1088_014055;Dbxref=NCBI_GP:QIE16200.1;Name=QIE16200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637630.1;locus_tag=IXO1088_014055;product=phosphate/phosphite/phosphonate ABC transporter substrate-binding protein;protein_id=QIE16200.1;transl_table=11 CP040687.1 Genbank gene 2908723 2909487 . - . ID=gene-IXO1088_014060;Name=IXO1088_014060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014060 CP040687.1 Protein Homology CDS 2908723 2909487 . - 0 ID=cds-QIE16201.1;Parent=gene-IXO1088_014060;Dbxref=NCBI_GP:QIE16201.1;Name=QIE16201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486059.1;locus_tag=IXO1088_014060;product=RNA methyltransferase;protein_id=QIE16201.1;transl_table=11 CP040687.1 Genbank gene 2909606 2910439 . + . ID=gene-IXO1088_014065;Name=IXO1088_014065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014065 CP040687.1 Protein Homology CDS 2909606 2910439 . + 0 ID=cds-QIE16202.1;Parent=gene-IXO1088_014065;Dbxref=NCBI_GP:QIE16202.1;Name=QIE16202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637632.1;locus_tag=IXO1088_014065;product=inositol monophosphatase;protein_id=QIE16202.1;transl_table=11 CP040687.1 Genbank gene 2910692 2911303 . - . ID=gene-IXO1088_014070;Name=IXO1088_014070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014070 CP040687.1 Protein Homology CDS 2910692 2911303 . - 0 ID=cds-QIE16203.1;Parent=gene-IXO1088_014070;Dbxref=NCBI_GP:QIE16203.1;Name=QIE16203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637633.1;locus_tag=IXO1088_014070;product=superoxide dismutase;protein_id=QIE16203.1;transl_table=11 CP040687.1 Genbank gene 2911558 2911998 . + . ID=gene-IXO1088_014075;Name=IXO1088_014075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014075 CP040687.1 Protein Homology CDS 2911558 2911998 . + 0 ID=cds-QIE16204.1;Parent=gene-IXO1088_014075;Dbxref=NCBI_GP:QIE16204.1;Name=QIE16204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637634.2;locus_tag=IXO1088_014075;product=ribonuclease;protein_id=QIE16204.1;transl_table=11 CP040687.1 Genbank gene 2911995 2912420 . + . ID=gene-IXO1088_014080;Name=IXO1088_014080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014080 CP040687.1 Protein Homology CDS 2911995 2912420 . + 0 ID=cds-QIE16205.1;Parent=gene-IXO1088_014080;Dbxref=NCBI_GP:QIE16205.1;Name=QIE16205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637635.1;locus_tag=IXO1088_014080;product=barstar family protein;protein_id=QIE16205.1;transl_table=11 CP040687.1 Genbank gene 2912482 2912557 . + . ID=gene-IXO1088_014085;Name=IXO1088_014085;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_014085 CP040687.1 cmsearch ncRNA 2912482 2912557 . + . ID=rna-IXO1088_014085;Parent=gene-IXO1088_014085;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_014085;product=sX9 sRNA CP040687.1 cmsearch exon 2912482 2912557 . + . ID=exon-IXO1088_014085-1;Parent=rna-IXO1088_014085;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_014085;product=sX9 sRNA CP040687.1 Genbank pseudogene 2912552 2912790 . - . ID=gene-IXO1088_014090;Name=IXO1088_014090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014090;pseudo=true CP040687.1 Protein Homology CDS 2912552 2912790 . - 0 ID=cds-IXO1088_014090;Parent=gene-IXO1088_014090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301011.1;locus_tag=IXO1088_014090;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2912869 2914764 . - . ID=gene-IXO1088_014095;Name=IXO1088_014095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014095 CP040687.1 Protein Homology CDS 2912869 2914764 . - 0 ID=cds-QIE16206.1;Parent=gene-IXO1088_014095;Dbxref=NCBI_GP:QIE16206.1;Name=QIE16206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005923190.1;locus_tag=IXO1088_014095;product=ATP-binding cassette domain-containing protein;protein_id=QIE16206.1;transl_table=11 CP040687.1 Genbank gene 2914854 2916230 . + . ID=gene-IXO1088_014100;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=IXO1088_014100 CP040687.1 Protein Homology CDS 2914854 2916230 . + 0 ID=cds-QIE16207.1;Parent=gene-IXO1088_014100;Dbxref=NCBI_GP:QIE16207.1;Name=QIE16207.1;gbkey=CDS;gene=dbpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637637.1;locus_tag=IXO1088_014100;product=ATP-dependent RNA helicase DbpA;protein_id=QIE16207.1;transl_table=11 CP040687.1 Genbank gene 2916333 2916893 . - . ID=gene-IXO1088_014105;Name=IXO1088_014105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014105 CP040687.1 Protein Homology CDS 2916333 2916893 . - 0 ID=cds-QIE16208.1;Parent=gene-IXO1088_014105;Dbxref=NCBI_GP:QIE16208.1;Name=QIE16208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637638.1;locus_tag=IXO1088_014105;product=adenine phosphoribosyltransferase;protein_id=QIE16208.1;transl_table=11 CP040687.1 Genbank gene 2916991 2918547 . - . ID=gene-IXO1088_014110;Name=IXO1088_014110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014110 CP040687.1 Protein Homology CDS 2916991 2918547 . - 0 ID=cds-QIE16209.1;Parent=gene-IXO1088_014110;Dbxref=NCBI_GP:QIE16209.1;Name=QIE16209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637639.1;locus_tag=IXO1088_014110;product=YdiU family protein;protein_id=QIE16209.1;transl_table=11 CP040687.1 Genbank gene 2918831 2919706 . + . ID=gene-IXO1088_014115;Name=IXO1088_014115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014115 CP040687.1 Protein Homology CDS 2918831 2919706 . + 0 ID=cds-QIE16210.1;Parent=gene-IXO1088_014115;Dbxref=NCBI_GP:QIE16210.1;Name=QIE16210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116192.1;locus_tag=IXO1088_014115;product=alpha/beta hydrolase;protein_id=QIE16210.1;transl_table=11 CP040687.1 Genbank gene 2919907 2920605 . - . ID=gene-IXO1088_014120;Name=IXO1088_014120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014120 CP040687.1 Protein Homology CDS 2919907 2920605 . - 0 ID=cds-QIE16211.1;Parent=gene-IXO1088_014120;Dbxref=NCBI_GP:QIE16211.1;Name=QIE16211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156137.1;locus_tag=IXO1088_014120;product=glutathione S-transferase;protein_id=QIE16211.1;transl_table=11 CP040687.1 Genbank gene 2920777 2920986 . - . ID=gene-IXO1088_014125;Name=IXO1088_014125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014125 CP040687.1 Protein Homology CDS 2920777 2920986 . - 0 ID=cds-QIE16212.1;Parent=gene-IXO1088_014125;Dbxref=NCBI_GP:QIE16212.1;Name=QIE16212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637642.1;locus_tag=IXO1088_014125;product=cold-shock protein;protein_id=QIE16212.1;transl_table=11 CP040687.1 Genbank gene 2921255 2921740 . + . ID=gene-IXO1088_014130;Name=IXO1088_014130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014130 CP040687.1 Protein Homology CDS 2921255 2921740 . + 0 ID=cds-QIE16213.1;Parent=gene-IXO1088_014130;Dbxref=NCBI_GP:QIE16213.1;Name=QIE16213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408745.1;locus_tag=IXO1088_014130;product=YaiI/YqxD family protein;protein_id=QIE16213.1;transl_table=11 CP040687.1 Genbank gene 2921811 2922359 . + . ID=gene-IXO1088_014135;Name=IXO1088_014135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014135 CP040687.1 Protein Homology CDS 2921811 2922359 . + 0 ID=cds-QIE16214.1;Parent=gene-IXO1088_014135;Dbxref=NCBI_GP:QIE16214.1;Name=QIE16214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637644.1;locus_tag=IXO1088_014135;product=YaeQ family protein;protein_id=QIE16214.1;transl_table=11 CP040687.1 Genbank gene 2922356 2923537 . + . ID=gene-IXO1088_014140;Name=IXO1088_014140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014140 CP040687.1 Protein Homology CDS 2922356 2923537 . + 0 ID=cds-QIE16215.1;Parent=gene-IXO1088_014140;Dbxref=NCBI_GP:QIE16215.1;Name=QIE16215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637645.1;locus_tag=IXO1088_014140;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=QIE16215.1;transl_table=11 CP040687.1 Genbank gene 2923761 2925830 . + . ID=gene-IXO1088_014145;Name=IXO1088_014145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014145 CP040687.1 Protein Homology CDS 2923761 2925830 . + 0 ID=cds-QIE16216.1;Parent=gene-IXO1088_014145;Dbxref=NCBI_GP:QIE16216.1;Name=QIE16216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637646.1;locus_tag=IXO1088_014145;product=EAL domain-containing protein;protein_id=QIE16216.1;transl_table=11 CP040687.1 Genbank gene 2925930 2926808 . - . ID=gene-IXO1088_014150;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=IXO1088_014150 CP040687.1 Protein Homology CDS 2925930 2926808 . - 0 ID=cds-QIE16217.1;Parent=gene-IXO1088_014150;Dbxref=NCBI_GP:QIE16217.1;Name=QIE16217.1;gbkey=CDS;gene=htpX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637647.1;locus_tag=IXO1088_014150;product=protease HtpX;protein_id=QIE16217.1;transl_table=11 CP040687.1 Genbank gene 2926906 2927805 . + . ID=gene-IXO1088_014155;Name=IXO1088_014155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014155 CP040687.1 Protein Homology CDS 2926906 2927805 . + 0 ID=cds-QIE16218.1;Parent=gene-IXO1088_014155;Dbxref=NCBI_GP:QIE16218.1;Name=QIE16218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301023.1;locus_tag=IXO1088_014155;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=QIE16218.1;transl_table=11 CP040687.1 Genbank gene 2927893 2928633 . + . ID=gene-IXO1088_014160;Name=IXO1088_014160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014160 CP040687.1 Protein Homology CDS 2927893 2928633 . + 0 ID=cds-QIE16219.1;Parent=gene-IXO1088_014160;Dbxref=NCBI_GP:QIE16219.1;Name=QIE16219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090372.1;locus_tag=IXO1088_014160;product=beta-ketoacyl-ACP reductase;protein_id=QIE16219.1;transl_table=11 CP040687.1 Genbank gene 2928793 2929368 . + . ID=gene-IXO1088_014165;Name=phaR;gbkey=Gene;gene=phaR;gene_biotype=protein_coding;locus_tag=IXO1088_014165 CP040687.1 Protein Homology CDS 2928793 2929368 . + 0 ID=cds-QIE16220.1;Parent=gene-IXO1088_014165;Dbxref=NCBI_GP:QIE16220.1;Name=QIE16220.1;gbkey=CDS;gene=phaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637650.2;locus_tag=IXO1088_014165;product=polyhydroxyalkanoate synthesis repressor PhaR;protein_id=QIE16220.1;transl_table=11 CP040687.1 Genbank pseudogene 2929427 2929498 . - . ID=gene-IXO1088_014170;Name=IXO1088_014170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014170;pseudo=true CP040687.1 Protein Homology CDS 2929427 2929498 . - 0 ID=cds-IXO1088_014170;Parent=gene-IXO1088_014170;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304672.1;locus_tag=IXO1088_014170;product=amino acid transporter;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2929542 2930513 . - . ID=gene-IXO1088_014175;Name=IXO1088_014175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014175 CP040687.1 Protein Homology CDS 2929542 2930513 . - 0 ID=cds-QIE16221.1;Parent=gene-IXO1088_014175;Dbxref=NCBI_GP:QIE16221.1;Name=QIE16221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116190.1;locus_tag=IXO1088_014175;product=TraB/GumN family protein;protein_id=QIE16221.1;transl_table=11 CP040687.1 Genbank gene 2930547 2931500 . - . ID=gene-IXO1088_014180;Name=IXO1088_014180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014180 CP040687.1 Protein Homology CDS 2930547 2931500 . - 0 ID=cds-QIE16222.1;Parent=gene-IXO1088_014180;Dbxref=NCBI_GP:QIE16222.1;Name=QIE16222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913042.1;locus_tag=IXO1088_014180;product=DUF1684 domain-containing protein;protein_id=QIE16222.1;transl_table=11 CP040687.1 Genbank gene 2931500 2933377 . - . ID=gene-IXO1088_014185;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=IXO1088_014185 CP040687.1 Protein Homology CDS 2931500 2933377 . - 0 ID=cds-QIE16223.1;Parent=gene-IXO1088_014185;Dbxref=NCBI_GP:QIE16223.1;Name=QIE16223.1;gbkey=CDS;gene=mutL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637653.1;locus_tag=IXO1088_014185;product=DNA mismatch repair endonuclease MutL;protein_id=QIE16223.1;transl_table=11 CP040687.1 Genbank gene 2933515 2935248 . - . ID=gene-IXO1088_014190;Name=IXO1088_014190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014190 CP040687.1 Protein Homology CDS 2933515 2935248 . - 0 ID=cds-QIE16224.1;Parent=gene-IXO1088_014190;Dbxref=NCBI_GP:QIE16224.1;Name=QIE16224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118646.1;locus_tag=IXO1088_014190;product=N-acetylmuramoyl-L-alanine amidase;protein_id=QIE16224.1;transl_table=11 CP040687.1 Genbank gene 2935301 2935801 . - . ID=gene-IXO1088_014195;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=IXO1088_014195 CP040687.1 Protein Homology CDS 2935301 2935801 . - 0 ID=cds-QIE16225.1;Parent=gene-IXO1088_014195;Dbxref=NCBI_GP:QIE16225.1;Name=QIE16225.1;gbkey=CDS;gene=tsaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156148.1;locus_tag=IXO1088_014195;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=QIE16225.1;transl_table=11 CP040687.1 Genbank gene 2935798 2937285 . - . ID=gene-IXO1088_014200;Name=IXO1088_014200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014200 CP040687.1 Protein Homology CDS 2935798 2937285 . - 0 ID=cds-QIE16226.1;Parent=gene-IXO1088_014200;Dbxref=NCBI_GP:QIE16226.1;Name=QIE16226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637656.1;locus_tag=IXO1088_014200;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=QIE16226.1;transl_table=11 CP040687.1 Genbank gene 2937310 2938377 . + . ID=gene-IXO1088_014205;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=IXO1088_014205 CP040687.1 Protein Homology CDS 2937310 2938377 . + 0 ID=cds-QIE16227.1;Parent=gene-IXO1088_014205;Dbxref=NCBI_GP:QIE16227.1;Name=QIE16227.1;gbkey=CDS;gene=queG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637657.1;locus_tag=IXO1088_014205;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=QIE16227.1;transl_table=11 CP040687.1 Genbank gene 2938523 2939860 . + . ID=gene-IXO1088_014210;Name=IXO1088_014210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014210 CP040687.1 Protein Homology CDS 2938523 2939860 . + 0 ID=cds-QIE16228.1;Parent=gene-IXO1088_014210;Dbxref=NCBI_GP:QIE16228.1;Name=QIE16228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372660.1;locus_tag=IXO1088_014210;product=exodeoxyribonuclease VII large subunit;protein_id=QIE16228.1;transl_table=11 CP040687.1 Genbank gene 2940156 2941418 . - . ID=gene-IXO1088_014215;Name=IXO1088_014215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014215 CP040687.1 Protein Homology CDS 2940156 2941418 . - 0 ID=cds-QIE16229.1;Parent=gene-IXO1088_014215;Dbxref=NCBI_GP:QIE16229.1;Name=QIE16229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503060.1;locus_tag=IXO1088_014215;product=virulence factor;protein_id=QIE16229.1;transl_table=11 CP040687.1 Genbank gene 2941635 2942382 . - . ID=gene-IXO1088_014220;Name=IXO1088_014220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014220 CP040687.1 Protein Homology CDS 2942168 2942382 . - 0 ID=cds-QIE16230.1;Parent=gene-IXO1088_014220;Dbxref=NCBI_GP:QIE16230.1;Name=QIE16230.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005368367.1;locus_tag=IXO1088_014220;product=IS5 family transposase;protein_id=QIE16230.1;transl_table=11 CP040687.1 Protein Homology CDS 2941635 2942169 . - 1 ID=cds-QIE16230.1;Parent=gene-IXO1088_014220;Dbxref=NCBI_GP:QIE16230.1;Name=QIE16230.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005368367.1;locus_tag=IXO1088_014220;product=IS5 family transposase;protein_id=QIE16230.1;transl_table=11 CP040687.1 Genbank gene 2942699 2944534 . - . ID=gene-IXO1088_014225;Name=IXO1088_014225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014225 CP040687.1 Protein Homology CDS 2942699 2944534 . - 0 ID=cds-QIE16231.1;Parent=gene-IXO1088_014225;Dbxref=NCBI_GP:QIE16231.1;Name=QIE16231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112352.1;locus_tag=IXO1088_014225;product=formylglycine-generating enzyme family protein;protein_id=QIE16231.1;transl_table=11 CP040687.1 Genbank gene 2944523 2944598 . - . ID=gene-IXO1088_014230;Name=IXO1088_014230;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_014230 CP040687.1 cmsearch ncRNA 2944523 2944598 . - . ID=rna-IXO1088_014230;Parent=gene-IXO1088_014230;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_014230;product=sX9 sRNA CP040687.1 cmsearch exon 2944523 2944598 . - . ID=exon-IXO1088_014230-1;Parent=rna-IXO1088_014230;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_014230;product=sX9 sRNA CP040687.1 Genbank pseudogene 2944634 2944840 . + . ID=gene-IXO1088_014235;Name=IXO1088_014235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014235;pseudo=true CP040687.1 Protein Homology CDS 2944634 2944840 . + 0 ID=cds-IXO1088_014235;Parent=gene-IXO1088_014235;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005928278.1;locus_tag=IXO1088_014235;product=ribonuclease D;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2944806 2945897 . + . ID=gene-IXO1088_014240;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=IXO1088_014240 CP040687.1 Protein Homology CDS 2944806 2945897 . + 0 ID=cds-QIE16232.1;Parent=gene-IXO1088_014240;Dbxref=NCBI_GP:QIE16232.1;Name=QIE16232.1;gbkey=CDS;gene=rnd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408756.1;locus_tag=IXO1088_014240;product=ribonuclease D;protein_id=QIE16232.1;transl_table=11 CP040687.1 Genbank gene 2945994 2946362 . - . ID=gene-IXO1088_014245;Name=IXO1088_014245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014245 CP040687.1 Protein Homology CDS 2945994 2946362 . - 0 ID=cds-QIE16233.1;Parent=gene-IXO1088_014245;Dbxref=NCBI_GP:QIE16233.1;Name=QIE16233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637662.1;locus_tag=IXO1088_014245;product=ATP-dependent DNA ligase;protein_id=QIE16233.1;transl_table=11 CP040687.1 Genbank gene 2946226 2946576 . - . ID=gene-IXO1088_014250;Name=IXO1088_014250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014250 CP040687.1 Protein Homology CDS 2946226 2946576 . - 0 ID=cds-QIE16234.1;Parent=gene-IXO1088_014250;Dbxref=NCBI_GP:QIE16234.1;Name=QIE16234.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13298.4;locus_tag=IXO1088_014250;product=hypothetical protein;protein_id=QIE16234.1;transl_table=11 CP040687.1 Genbank pseudogene 2946592 2946789 . - . ID=gene-IXO1088_014255;Name=IXO1088_014255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014255;pseudo=true CP040687.1 Protein Homology CDS 2946592 2946789 . - 0 ID=cds-IXO1088_014255;Parent=gene-IXO1088_014255;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503050.1;locus_tag=IXO1088_014255;product=DUF3606 domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2946990 2947391 . + . ID=gene-IXO1088_014260;Name=IXO1088_014260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014260 CP040687.1 Protein Homology CDS 2946990 2947391 . + 0 ID=cds-QIE16235.1;Parent=gene-IXO1088_014260;Dbxref=NCBI_GP:QIE16235.1;Name=QIE16235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637664.1;locus_tag=IXO1088_014260;product=histone-like nucleoid-structuring protein;protein_id=QIE16235.1;transl_table=11 CP040687.1 Genbank gene 2947484 2947559 . + . ID=gene-IXO1088_014265;Name=IXO1088_014265;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_014265 CP040687.1 tRNAscan-SE tRNA 2947484 2947559 . + . ID=rna-IXO1088_014265;Parent=gene-IXO1088_014265;anticodon=(pos:2947517..2947519);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_014265;product=tRNA-Ala CP040687.1 tRNAscan-SE exon 2947484 2947559 . + . ID=exon-IXO1088_014265-1;Parent=rna-IXO1088_014265;anticodon=(pos:2947517..2947519);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_014265;product=tRNA-Ala CP040687.1 Genbank pseudogene 2947716 2947920 . - . ID=gene-IXO1088_014270;Name=IXO1088_014270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014270;pseudo=true CP040687.1 Protein Homology CDS 2947716 2947920 . - 0 ID=cds-IXO1088_014270;Parent=gene-IXO1088_014270;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002933261.1;locus_tag=IXO1088_014270;product=kfra protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2947898 2948032 . - . ID=gene-IXO1088_014275;Name=IXO1088_014275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014275 CP040687.1 Protein Homology CDS 2947898 2948032 . - 0 ID=cds-QIE16236.1;Parent=gene-IXO1088_014275;Dbxref=NCBI_GP:QIE16236.1;Name=QIE16236.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00665.24;locus_tag=IXO1088_014275;product=transposase family protein;protein_id=QIE16236.1;transl_table=11 CP040687.1 Genbank gene 2948255 2948434 . - . ID=gene-IXO1088_014280;Name=IXO1088_014280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014280 CP040687.1 Protein Homology CDS 2948255 2948434 . - 0 ID=cds-QIE18002.1;Parent=gene-IXO1088_014280;Dbxref=NCBI_GP:QIE18002.1;Name=QIE18002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463309.1;locus_tag=IXO1088_014280;product=hypothetical protein;protein_id=QIE18002.1;transl_table=11 CP040687.1 Genbank pseudogene 2948705 2949033 . - . ID=gene-IXO1088_014285;Name=IXO1088_014285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014285;pseudo=true CP040687.1 Protein Homology CDS 2948705 2949033 . - 0 ID=cds-IXO1088_014285;Parent=gene-IXO1088_014285;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463310.1;locus_tag=IXO1088_014285;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2949036 2949326 . - . ID=gene-IXO1088_014290;Name=IXO1088_014290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014290 CP040687.1 Protein Homology CDS 2949036 2949326 . - 0 ID=cds-QIE16237.1;Parent=gene-IXO1088_014290;Dbxref=NCBI_GP:QIE16237.1;Name=QIE16237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004743243.1;locus_tag=IXO1088_014290;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=QIE16237.1;transl_table=11 CP040687.1 Genbank gene 2949314 2949592 . - . ID=gene-IXO1088_014295;Name=IXO1088_014295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014295 CP040687.1 Protein Homology CDS 2949314 2949592 . - 0 ID=cds-QIE16238.1;Parent=gene-IXO1088_014295;Dbxref=NCBI_GP:QIE16238.1;Name=QIE16238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019952150.1;locus_tag=IXO1088_014295;product=ribbon-helix-helix protein%2C CopG family;protein_id=QIE16238.1;transl_table=11 CP040687.1 Genbank pseudogene 2949673 2950105 . - . ID=gene-IXO1088_014300;Name=IXO1088_014300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014300;pseudo=true CP040687.1 Protein Homology CDS 2949673 2950105 . - 0 ID=cds-IXO1088_014300;Parent=gene-IXO1088_014300;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004541376.1;locus_tag=IXO1088_014300;product=relaxase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2950077 2950265 . - . ID=gene-IXO1088_014305;Name=IXO1088_014305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014305 CP040687.1 Protein Homology CDS 2950077 2950265 . - 0 ID=cds-QIE18003.1;Parent=gene-IXO1088_014305;Dbxref=NCBI_GP:QIE18003.1;Name=QIE18003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444691.1;locus_tag=IXO1088_014305;product=ribbon-helix-helix protein%2C CopG family;protein_id=QIE18003.1;transl_table=11 CP040687.1 Genbank gene 2950527 2951483 . - . ID=gene-IXO1088_014310;Name=IXO1088_014310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014310 CP040687.1 Protein Homology CDS 2950527 2951483 . - 0 ID=cds-QIE16239.1;Parent=gene-IXO1088_014310;Dbxref=NCBI_GP:QIE16239.1;Name=QIE16239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=IXO1088_014310;product=IS30-like element IS1112a family transposase;protein_id=QIE16239.1;transl_table=11 CP040687.1 Genbank gene 2952096 2953280 . - . ID=gene-IXO1088_014315;Name=IXO1088_014315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014315 CP040687.1 Protein Homology CDS 2952096 2953280 . - 0 ID=cds-QIE16240.1;Parent=gene-IXO1088_014315;Dbxref=NCBI_GP:QIE16240.1;Name=QIE16240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557964.1;locus_tag=IXO1088_014315;product=IS256 family transposase;protein_id=QIE16240.1;transl_table=11 CP040687.1 Genbank pseudogene 2953244 2953369 . + . ID=gene-IXO1088_014320;Name=IXO1088_014320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014320;pseudo=true CP040687.1 Protein Homology CDS 2953244 2953369 . + 0 ID=cds-IXO1088_014320;Parent=gene-IXO1088_014320;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408523.1;locus_tag=IXO1088_014320;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2953861 2954826 . + . ID=gene-IXO1088_014325;Name=IXO1088_014325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014325 CP040687.1 Protein Homology CDS 2953861 2954826 . + 0 ID=cds-QIE16241.1;Parent=gene-IXO1088_014325;Dbxref=NCBI_GP:QIE16241.1;Name=QIE16241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_014325;product=IS1595-like element ISXo5 family transposase;protein_id=QIE16241.1;transl_table=11 CP040687.1 Genbank pseudogene 2954913 2955533 . + . ID=gene-IXO1088_014330;Name=IXO1088_014330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014330;pseudo=true CP040687.1 Protein Homology CDS 2954913 2955533 . + 0 ID=cds-IXO1088_014330;Parent=gene-IXO1088_014330;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090389.1;locus_tag=IXO1088_014330;product=DNA-3-methyladenine glycosylase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2955485 2957052 . - . ID=gene-IXO1088_014335;Name=IXO1088_014335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014335;pseudo=true CP040687.1 Protein Homology CDS 2955485 2957052 . - 0 ID=cds-IXO1088_014335;Parent=gene-IXO1088_014335;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112348.1;locus_tag=IXO1088_014335;product=ATP-dependent DNA helicase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2957329 2959164 . - . ID=gene-IXO1088_014340;Name=IXO1088_014340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014340;pseudo=true CP040687.1 Protein Homology CDS 2957329 2959164 . - 0 ID=cds-IXO1088_014340;Parent=gene-IXO1088_014340;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637671.1;locus_tag=IXO1088_014340;product=ATP-dependent DNA helicase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2959142 2959366 . - . ID=gene-IXO1088_014345;Name=IXO1088_014345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014345;pseudo=true CP040687.1 Protein Homology CDS 2959142 2959366 . - 0 ID=cds-IXO1088_014345;Parent=gene-IXO1088_014345;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010382416.1;locus_tag=IXO1088_014345;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2959319 2959735 . + . ID=gene-IXO1088_014350;Name=IXO1088_014350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014350 CP040687.1 Protein Homology CDS 2959319 2959735 . + 0 ID=cds-QIE16242.1;Parent=gene-IXO1088_014350;Dbxref=NCBI_GP:QIE16242.1;Name=QIE16242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301507.1;locus_tag=IXO1088_014350;product=DUF3301 domain-containing protein;protein_id=QIE16242.1;transl_table=11 CP040687.1 Genbank gene 2959946 2960272 . - . ID=gene-IXO1088_014355;Name=IXO1088_014355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014355 CP040687.1 Protein Homology CDS 2959946 2960272 . - 0 ID=cds-QIE16243.1;Parent=gene-IXO1088_014355;Dbxref=NCBI_GP:QIE16243.1;Name=QIE16243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408764.1;locus_tag=IXO1088_014355;product=hypothetical protein;protein_id=QIE16243.1;transl_table=11 CP040687.1 Genbank gene 2960305 2960745 . - . ID=gene-IXO1088_014360;Name=IXO1088_014360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014360 CP040687.1 Protein Homology CDS 2960305 2960745 . - 0 ID=cds-QIE16244.1;Parent=gene-IXO1088_014360;Dbxref=NCBI_GP:QIE16244.1;Name=QIE16244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637674.1;locus_tag=IXO1088_014360;product=ClpXP protease specificity-enhancing factor;protein_id=QIE16244.1;transl_table=11 CP040687.1 Genbank gene 2960824 2961459 . - . ID=gene-IXO1088_014365;Name=IXO1088_014365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014365 CP040687.1 Protein Homology CDS 2960824 2961459 . - 0 ID=cds-QIE16245.1;Parent=gene-IXO1088_014365;Dbxref=NCBI_GP:QIE16245.1;Name=QIE16245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637675.1;locus_tag=IXO1088_014365;product=stringent starvation protein A;protein_id=QIE16245.1;transl_table=11 CP040687.1 Genbank gene 2961852 2962595 . - . ID=gene-IXO1088_014370;Name=IXO1088_014370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014370 CP040687.1 Protein Homology CDS 2961852 2962595 . - 0 ID=cds-QIE18004.1;Parent=gene-IXO1088_014370;Dbxref=NCBI_GP:QIE18004.1;Name=QIE18004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637676.1;locus_tag=IXO1088_014370;product=cytochrome c1;protein_id=QIE18004.1;transl_table=11 CP040687.1 Genbank gene 2962603 2963862 . - . ID=gene-IXO1088_014375;Name=IXO1088_014375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014375 CP040687.1 Protein Homology CDS 2962603 2963862 . - 0 ID=cds-QIE16246.1;Parent=gene-IXO1088_014375;Dbxref=NCBI_GP:QIE16246.1;Name=QIE16246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637677.1;locus_tag=IXO1088_014375;product=cytochrome bc complex cytochrome b subunit;protein_id=QIE16246.1;transl_table=11 CP040687.1 Genbank gene 2963862 2964506 . - . ID=gene-IXO1088_014380;Name=petA;gbkey=Gene;gene=petA;gene_biotype=protein_coding;locus_tag=IXO1088_014380 CP040687.1 Protein Homology CDS 2963862 2964506 . - 0 ID=cds-QIE16247.1;Parent=gene-IXO1088_014380;Dbxref=NCBI_GP:QIE16247.1;Name=QIE16247.1;gbkey=CDS;gene=petA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637678.1;locus_tag=IXO1088_014380;product=ubiquinol-cytochrome c reductase iron-sulfur subunit;protein_id=QIE16247.1;transl_table=11 CP040687.1 Genbank pseudogene 2964670 2964926 . - . ID=gene-IXO1088_014385;Name=IXO1088_014385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014385;pseudo=true CP040687.1 Protein Homology CDS 2964670 2964926 . - 0 ID=cds-IXO1088_014385;Parent=gene-IXO1088_014385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005928246.1;locus_tag=IXO1088_014385;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2965036 2966022 . - . ID=gene-IXO1088_014390;Name=IXO1088_014390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014390 CP040687.1 Protein Homology CDS 2965036 2966022 . - 0 ID=cds-QIE16248.1;Parent=gene-IXO1088_014390;Dbxref=NCBI_GP:QIE16248.1;Name=QIE16248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637679.1;locus_tag=IXO1088_014390;product=lytic transglycosylase domain-containing protein;protein_id=QIE16248.1;transl_table=11 CP040687.1 Genbank gene 2966136 2966210 . + . ID=gene-IXO1088_014395;Name=IXO1088_014395;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_014395 CP040687.1 cmsearch ncRNA 2966136 2966210 . + . ID=rna-IXO1088_014395;Parent=gene-IXO1088_014395;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_014395;product=sX9 sRNA CP040687.1 cmsearch exon 2966136 2966210 . + . ID=exon-IXO1088_014395-1;Parent=rna-IXO1088_014395;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_014395;product=sX9 sRNA CP040687.1 Genbank pseudogene 2966241 2967179 . - . ID=gene-IXO1088_014400;Name=IXO1088_014400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014400;pseudo=true CP040687.1 Protein Homology CDS 2966241 2967179 . - 0 ID=cds-IXO1088_014400;Parent=gene-IXO1088_014400;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051602.1;locus_tag=IXO1088_014400;product=WYL domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2967283 2967919 . + . ID=gene-IXO1088_014405;Name=IXO1088_014405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014405;pseudo=true CP040687.1 Protein Homology CDS 2967283 2967919 . + 0 ID=cds-IXO1088_014405;Parent=gene-IXO1088_014405;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013213377.1;locus_tag=IXO1088_014405;product=glutathione S-transferase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2967958 2969412 . + . ID=gene-IXO1088_014410;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=IXO1088_014410 CP040687.1 Protein Homology CDS 2967958 2969412 . + 0 ID=cds-QIE16249.1;Parent=gene-IXO1088_014410;Dbxref=NCBI_GP:QIE16249.1;Name=QIE16249.1;gbkey=CDS;gene=miaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182646.1;locus_tag=IXO1088_014410;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=QIE16249.1;transl_table=11 CP040687.1 Genbank gene 2969836 2970822 . + . ID=gene-IXO1088_014415;Name=IXO1088_014415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014415 CP040687.1 Protein Homology CDS 2969836 2970822 . + 0 ID=cds-QIE16250.1;Parent=gene-IXO1088_014415;Dbxref=NCBI_GP:QIE16250.1;Name=QIE16250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408767.1;locus_tag=IXO1088_014415;product=PhoH family protein;protein_id=QIE16250.1;transl_table=11 CP040687.1 Genbank gene 2971234 2971896 . + . ID=gene-IXO1088_014420;Name=IXO1088_014420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014420 CP040687.1 Protein Homology CDS 2971234 2971896 . + 0 ID=cds-QIE16251.1;Parent=gene-IXO1088_014420;Dbxref=NCBI_GP:QIE16251.1;Name=QIE16251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051605.1;locus_tag=IXO1088_014420;product=hypothetical protein;protein_id=QIE16251.1;transl_table=11 CP040687.1 Genbank gene 2971951 2972436 . + . ID=gene-IXO1088_014425;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=IXO1088_014425 CP040687.1 Protein Homology CDS 2971951 2972436 . + 0 ID=cds-QIE16252.1;Parent=gene-IXO1088_014425;Dbxref=NCBI_GP:QIE16252.1;Name=QIE16252.1;gbkey=CDS;gene=ybeY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637685.1;locus_tag=IXO1088_014425;product=rRNA maturation RNase YbeY;protein_id=QIE16252.1;transl_table=11 CP040687.1 Genbank gene 2972436 2972954 . + . ID=gene-IXO1088_014430;Name=IXO1088_014430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014430 CP040687.1 Protein Homology CDS 2972436 2972954 . + 0 ID=cds-QIE16253.1;Parent=gene-IXO1088_014430;Dbxref=NCBI_GP:QIE16253.1;Name=QIE16253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637686.1;locus_tag=IXO1088_014430;product=hypothetical protein;protein_id=QIE16253.1;transl_table=11 CP040687.1 Genbank gene 2973049 2973927 . + . ID=gene-IXO1088_014435;Name=IXO1088_014435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014435 CP040687.1 Protein Homology CDS 2973049 2973927 . + 0 ID=cds-QIE16254.1;Parent=gene-IXO1088_014435;Dbxref=NCBI_GP:QIE16254.1;Name=QIE16254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637687.1;locus_tag=IXO1088_014435;product=CBS domain-containing protein;protein_id=QIE16254.1;transl_table=11 CP040687.1 Genbank gene 2973924 2975204 . + . ID=gene-IXO1088_014440;Name=IXO1088_014440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014440 CP040687.1 Protein Homology CDS 2973924 2975204 . + 0 ID=cds-QIE16255.1;Parent=gene-IXO1088_014440;Dbxref=NCBI_GP:QIE16255.1;Name=QIE16255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010382454.1;locus_tag=IXO1088_014440;product=DUF4105 domain-containing protein;protein_id=QIE16255.1;transl_table=11 CP040687.1 Genbank gene 2975220 2976221 . + . ID=gene-IXO1088_014445;Name=IXO1088_014445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014445 CP040687.1 Protein Homology CDS 2975220 2976221 . + 0 ID=cds-QIE16256.1;Parent=gene-IXO1088_014445;Dbxref=NCBI_GP:QIE16256.1;Name=QIE16256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637689.1;locus_tag=IXO1088_014445;product=magnesium and cobalt transport protein CorA;protein_id=QIE16256.1;transl_table=11 CP040687.1 Genbank gene 2976373 2977737 . - . ID=gene-IXO1088_014450;Name=IXO1088_014450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014450 CP040687.1 Protein Homology CDS 2976373 2977737 . - 0 ID=cds-QIE16257.1;Parent=gene-IXO1088_014450;Dbxref=NCBI_GP:QIE16257.1;Name=QIE16257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637690.1;locus_tag=IXO1088_014450;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=QIE16257.1;transl_table=11 CP040687.1 Genbank gene 2977992 2978402 . + . ID=gene-IXO1088_014455;Name=IXO1088_014455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014455 CP040687.1 Protein Homology CDS 2977992 2978402 . + 0 ID=cds-QIE18005.1;Parent=gene-IXO1088_014455;Dbxref=NCBI_GP:QIE18005.1;Name=QIE18005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237582.1;locus_tag=IXO1088_014455;product=hypothetical protein;protein_id=QIE18005.1;transl_table=11 CP040687.1 Genbank gene 2978558 2979388 . - . ID=gene-IXO1088_014460;Name=IXO1088_014460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014460 CP040687.1 Protein Homology CDS 2978558 2979388 . - 0 ID=cds-QIE16258.1;Parent=gene-IXO1088_014460;Dbxref=NCBI_GP:QIE16258.1;Name=QIE16258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408774.1;locus_tag=IXO1088_014460;product=ABC transporter permease subunit;protein_id=QIE16258.1;transl_table=11 CP040687.1 Genbank pseudogene 2979404 2979820 . - . ID=gene-IXO1088_014465;Name=IXO1088_014465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014465;pseudo=true CP040687.1 Protein Homology CDS 2979404 2979820 . - 0 ID=cds-IXO1088_014465;Parent=gene-IXO1088_014465;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849508.1;locus_tag=IXO1088_014465;product=ABC transporter permease subunit;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2979702 2980949 . - . ID=gene-IXO1088_014470;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=IXO1088_014470 CP040687.1 Protein Homology CDS 2979702 2980949 . - 0 ID=cds-QIE16259.1;Parent=gene-IXO1088_014470;Dbxref=NCBI_GP:QIE16259.1;Name=QIE16259.1;gbkey=CDS;gene=potA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408776.1;locus_tag=IXO1088_014470;product=polyamine ABC transporter ATP-binding protein;protein_id=QIE16259.1;transl_table=11 CP040687.1 Genbank gene 2981095 2982606 . - . ID=gene-IXO1088_014475;Name=IXO1088_014475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014475 CP040687.1 Protein Homology CDS 2981095 2982606 . - 0 ID=cds-QIE16260.1;Parent=gene-IXO1088_014475;Dbxref=NCBI_GP:QIE16260.1;Name=QIE16260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259371.1;locus_tag=IXO1088_014475;product=efflux transporter outer membrane subunit;protein_id=QIE16260.1;transl_table=11 CP040687.1 Genbank gene 2982593 2984179 . - . ID=gene-IXO1088_014480;Name=IXO1088_014480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014480 CP040687.1 Protein Homology CDS 2982593 2984179 . - 0 ID=cds-QIE16261.1;Parent=gene-IXO1088_014480;Dbxref=NCBI_GP:QIE16261.1;Name=QIE16261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637696.1;locus_tag=IXO1088_014480;product=multidrug efflux MFS transporter;protein_id=QIE16261.1;transl_table=11 CP040687.1 Genbank gene 2984176 2985378 . - . ID=gene-IXO1088_014485;Name=IXO1088_014485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014485 CP040687.1 Protein Homology CDS 2984176 2985378 . - 0 ID=cds-QIE16262.1;Parent=gene-IXO1088_014485;Dbxref=NCBI_GP:QIE16262.1;Name=QIE16262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637697.1;locus_tag=IXO1088_014485;product=HlyD family secretion protein;protein_id=QIE16262.1;transl_table=11 CP040687.1 Genbank gene 2985885 2987204 . + . ID=gene-IXO1088_014490;Name=IXO1088_014490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014490 CP040687.1 Protein Homology CDS 2985885 2987204 . + 0 ID=cds-QIE16263.1;Parent=gene-IXO1088_014490;Dbxref=NCBI_GP:QIE16263.1;Name=QIE16263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_014490;product=IS701 family transposase;protein_id=QIE16263.1;transl_table=11 CP040687.1 Genbank pseudogene 2987150 2987290 . + . ID=gene-IXO1088_014495;Name=IXO1088_014495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014495;pseudo=true CP040687.1 Protein Homology CDS 2987150 2987290 . + 0 ID=cds-IXO1088_014495;Parent=gene-IXO1088_014495;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409568.1;locus_tag=IXO1088_014495;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 2987317 2987469 . + . ID=gene-IXO1088_014500;Name=IXO1088_014500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014500;pseudo=true CP040687.1 Protein Homology CDS 2987317 2987469 . + 0 ID=cds-IXO1088_014500;Parent=gene-IXO1088_014500;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258951.1;locus_tag=IXO1088_014500;product=pectate lyase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2987508 2988893 . - . ID=gene-IXO1088_014505;Name=IXO1088_014505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014505 CP040687.1 Protein Homology CDS 2987508 2988893 . - 0 ID=cds-QIE16264.1;Parent=gene-IXO1088_014505;Dbxref=NCBI_GP:QIE16264.1;Name=QIE16264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637700.1;locus_tag=IXO1088_014505;product=glutamine synthetase;protein_id=QIE16264.1;transl_table=11 CP040687.1 Genbank pseudogene 2988900 2989656 . - . ID=gene-IXO1088_014510;Name=IXO1088_014510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014510;pseudo=true CP040687.1 Protein Homology CDS 2988900 2989656 . - 0 ID=cds-IXO1088_014510;Parent=gene-IXO1088_014510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637701.1;locus_tag=IXO1088_014510;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 2989801 2991180 . + . ID=gene-IXO1088_014515;Name=IXO1088_014515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014515 CP040687.1 Protein Homology CDS 2989801 2991180 . + 0 ID=cds-QIE16265.1;Parent=gene-IXO1088_014515;Dbxref=NCBI_GP:QIE16265.1;Name=QIE16265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637702.1;locus_tag=IXO1088_014515;product=glutamine synthetase;protein_id=QIE16265.1;transl_table=11 CP040687.1 Genbank gene 2991180 2992496 . + . ID=gene-IXO1088_014520;Name=IXO1088_014520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014520 CP040687.1 Protein Homology CDS 2991180 2992496 . + 0 ID=cds-QIE16266.1;Parent=gene-IXO1088_014520;Dbxref=NCBI_GP:QIE16266.1;Name=QIE16266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972335.1;locus_tag=IXO1088_014520;product=FAD-binding oxidoreductase;protein_id=QIE16266.1;transl_table=11 CP040687.1 Genbank gene 2992633 2993877 . + . ID=gene-IXO1088_014525;Name=IXO1088_014525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014525 CP040687.1 Protein Homology CDS 2992633 2993877 . + 0 ID=cds-QIE18006.1;Parent=gene-IXO1088_014525;Dbxref=NCBI_GP:QIE18006.1;Name=QIE18006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444665.1;locus_tag=IXO1088_014525;product=diguanylate cyclase;protein_id=QIE18006.1;transl_table=11 CP040687.1 Genbank gene 2994185 2995465 . - . ID=gene-IXO1088_014530;Name=IXO1088_014530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014530 CP040687.1 Protein Homology CDS 2994185 2995465 . - 0 ID=cds-QIE16267.1;Parent=gene-IXO1088_014530;Dbxref=NCBI_GP:QIE16267.1;Name=QIE16267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301209.1;locus_tag=IXO1088_014530;product=MHS family MFS transporter;protein_id=QIE16267.1;transl_table=11 CP040687.1 Genbank gene 2995771 2996079 . - . ID=gene-IXO1088_014535;Name=IXO1088_014535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014535 CP040687.1 Protein Homology CDS 2995771 2996079 . - 0 ID=cds-QIE18007.1;Parent=gene-IXO1088_014535;Dbxref=NCBI_GP:QIE18007.1;Name=QIE18007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637707.1;locus_tag=IXO1088_014535;product=hypothetical protein;protein_id=QIE18007.1;transl_table=11 CP040687.1 Genbank gene 2996039 2998387 . - . ID=gene-IXO1088_014540;Name=IXO1088_014540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014540 CP040687.1 Protein Homology CDS 2996039 2998387 . - 0 ID=cds-QIE16268.1;Parent=gene-IXO1088_014540;Dbxref=NCBI_GP:QIE16268.1;Name=QIE16268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637708.1;locus_tag=IXO1088_014540;product=FdhF/YdeP family oxidoreductase;protein_id=QIE16268.1;transl_table=11 CP040687.1 Genbank gene 2998384 2999229 . - . ID=gene-IXO1088_014545;Name=IXO1088_014545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014545 CP040687.1 Protein Homology CDS 2998384 2999229 . - 0 ID=cds-QIE16269.1;Parent=gene-IXO1088_014545;Dbxref=NCBI_GP:QIE16269.1;Name=QIE16269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156198.1;locus_tag=IXO1088_014545;product=sulfurtransferase FdhD;protein_id=QIE16269.1;transl_table=11 CP040687.1 Genbank gene 2999236 3000930 . - . ID=gene-IXO1088_014550;Name=IXO1088_014550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014550 CP040687.1 Protein Homology CDS 2999236 3000930 . - 0 ID=cds-QIE16270.1;Parent=gene-IXO1088_014550;Dbxref=NCBI_GP:QIE16270.1;Name=QIE16270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637710.1;locus_tag=IXO1088_014550;product=OFA family MFS transporter;protein_id=QIE16270.1;transl_table=11 CP040687.1 Genbank pseudogene 3001242 3001471 . - . ID=gene-IXO1088_014555;Name=IXO1088_014555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014555;pseudo=true CP040687.1 Protein Homology CDS 3001242 3001471 . - 0 ID=cds-IXO1088_014555;Parent=gene-IXO1088_014555;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488291.1;locus_tag=IXO1088_014555;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3001460 3002812 . + . ID=gene-IXO1088_014560;Name=IXO1088_014560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014560 CP040687.1 Protein Homology CDS 3001460 3002812 . + 0 ID=cds-QIE16271.1;Parent=gene-IXO1088_014560;Dbxref=NCBI_GP:QIE16271.1;Name=QIE16271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259384.1;locus_tag=IXO1088_014560;product=aspartate aminotransferase family protein;protein_id=QIE16271.1;transl_table=11 CP040687.1 Genbank gene 3002873 3006010 . - . ID=gene-IXO1088_014565;Name=IXO1088_014565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014565 CP040687.1 Protein Homology CDS 3002873 3006010 . - 0 ID=cds-QIE16272.1;Parent=gene-IXO1088_014565;Dbxref=NCBI_GP:QIE16272.1;Name=QIE16272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376945.1;locus_tag=IXO1088_014565;product=hypothetical protein;protein_id=QIE16272.1;transl_table=11 CP040687.1 Genbank gene 3006177 3007031 . + . ID=gene-IXO1088_014570;Name=IXO1088_014570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014570 CP040687.1 Protein Homology CDS 3006177 3007031 . + 0 ID=cds-QIE16273.1;Parent=gene-IXO1088_014570;Dbxref=NCBI_GP:QIE16273.1;Name=QIE16273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915330.1;locus_tag=IXO1088_014570;product=plasmid replication/partition related protein;protein_id=QIE16273.1;transl_table=11 CP040687.1 Genbank gene 3007202 3008506 . + . ID=gene-IXO1088_014575;Name=IXO1088_014575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014575 CP040687.1 Protein Homology CDS 3007202 3008506 . + 0 ID=cds-QIE16274.1;Parent=gene-IXO1088_014575;Dbxref=NCBI_GP:QIE16274.1;Name=QIE16274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637713.1;locus_tag=IXO1088_014575;product=DUF445 family protein;protein_id=QIE16274.1;transl_table=11 CP040687.1 Genbank gene 3008648 3012742 . + . ID=gene-IXO1088_014580;Name=IXO1088_014580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014580 CP040687.1 Protein Homology CDS 3008648 3012742 . + 0 ID=cds-QIE16275.1;Parent=gene-IXO1088_014580;Dbxref=NCBI_GP:QIE16275.1;Name=QIE16275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007962777.1;locus_tag=IXO1088_014580;product=response regulator;protein_id=QIE16275.1;transl_table=11 CP040687.1 Genbank gene 3012776 3013762 . + . ID=gene-IXO1088_014585;Name=IXO1088_014585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014585 CP040687.1 Protein Homology CDS 3012776 3013762 . + 0 ID=cds-QIE16276.1;Parent=gene-IXO1088_014585;Dbxref=NCBI_GP:QIE16276.1;Name=QIE16276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259389.1;locus_tag=IXO1088_014585;product=response regulator;protein_id=QIE16276.1;transl_table=11 CP040687.1 Genbank gene 3013887 3014870 . - . ID=gene-IXO1088_014590;Name=IXO1088_014590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014590 CP040687.1 Protein Homology CDS 3013887 3014870 . - 0 ID=cds-QIE16277.1;Parent=gene-IXO1088_014590;Dbxref=NCBI_GP:QIE16277.1;Name=QIE16277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=IXO1088_014590;product=IS5 family transposase;protein_id=QIE16277.1;transl_table=11 CP040687.1 Genbank gene 3014812 3015051 . - . ID=gene-IXO1088_014595;Name=IXO1088_014595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014595 CP040687.1 Protein Homology CDS 3014812 3015051 . - 0 ID=cds-QIE16278.1;Parent=gene-IXO1088_014595;Dbxref=NCBI_GP:QIE16278.1;Name=QIE16278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007962169.1;locus_tag=IXO1088_014595;product=hypothetical protein;protein_id=QIE16278.1;transl_table=11 CP040687.1 Genbank gene 3015319 3020343 . - . ID=gene-IXO1088_014600;Name=IXO1088_014600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014600 CP040687.1 Protein Homology CDS 3015319 3020343 . - 0 ID=cds-QIE16279.1;Parent=gene-IXO1088_014600;Dbxref=NCBI_GP:QIE16279.1;Name=QIE16279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637719.1;locus_tag=IXO1088_014600;product=NAD-glutamate dehydrogenase;protein_id=QIE16279.1;transl_table=11 CP040687.1 Genbank gene 3020621 3021280 . + . ID=gene-IXO1088_014605;Name=IXO1088_014605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014605 CP040687.1 Protein Homology CDS 3020621 3021280 . + 0 ID=cds-QIE16280.1;Parent=gene-IXO1088_014605;Dbxref=NCBI_GP:QIE16280.1;Name=QIE16280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917360.1;locus_tag=IXO1088_014605;product=TetR/AcrR family transcriptional regulator;protein_id=QIE16280.1;transl_table=11 CP040687.1 Genbank gene 3021295 3022599 . + . ID=gene-IXO1088_014610;Name=IXO1088_014610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014610 CP040687.1 Protein Homology CDS 3021295 3022599 . + 0 ID=cds-QIE16281.1;Parent=gene-IXO1088_014610;Dbxref=NCBI_GP:QIE16281.1;Name=QIE16281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637721.1;locus_tag=IXO1088_014610;product=efflux RND transporter periplasmic adaptor subunit;protein_id=QIE16281.1;transl_table=11 CP040687.1 Genbank gene 3022612 3025782 . + . ID=gene-IXO1088_014615;Name=IXO1088_014615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014615 CP040687.1 Protein Homology CDS 3022612 3025782 . + 0 ID=cds-QIE16282.1;Parent=gene-IXO1088_014615;Dbxref=NCBI_GP:QIE16282.1;Name=QIE16282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637722.1;locus_tag=IXO1088_014615;product=multidrug efflux RND transporter permease subunit;protein_id=QIE16282.1;transl_table=11 CP040687.1 Genbank pseudogene 3025891 3026751 . + . ID=gene-IXO1088_014620;Name=IXO1088_014620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014620;pseudo=true CP040687.1 Protein Homology CDS 3025891 3026751 . + 0 ID=cds-IXO1088_014620;Parent=gene-IXO1088_014620;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502954.1;locus_tag=IXO1088_014620;product=IS4 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3026758 3027723 . - . ID=gene-IXO1088_014625;Name=IXO1088_014625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014625 CP040687.1 Protein Homology CDS 3026758 3027723 . - 0 ID=cds-QIE16283.1;Parent=gene-IXO1088_014625;Dbxref=NCBI_GP:QIE16283.1;Name=QIE16283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_014625;product=IS1595-like element ISXo5 family transposase;protein_id=QIE16283.1;transl_table=11 CP040687.1 Genbank pseudogene 3027821 3028288 . + . ID=gene-IXO1088_014630;Name=IXO1088_014630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014630;pseudo=true CP040687.1 Protein Homology CDS 3027821 3028288 . + 0 ID=cds-IXO1088_014630;Parent=gene-IXO1088_014630;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611069.1;locus_tag=IXO1088_014630;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3028430 3029425 . - . ID=gene-IXO1088_014635;Name=IXO1088_014635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014635 CP040687.1 Protein Homology CDS 3028430 3029425 . - 0 ID=cds-QIE16284.1;Parent=gene-IXO1088_014635;Dbxref=NCBI_GP:QIE16284.1;Name=QIE16284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161385.1;locus_tag=IXO1088_014635;product=LacI family DNA-binding transcriptional regulator;protein_id=QIE16284.1;transl_table=11 CP040687.1 Genbank gene 3029586 3032102 . + . ID=gene-IXO1088_014640;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=IXO1088_014640 CP040687.1 Protein Homology CDS 3029586 3032102 . + 0 ID=cds-QIE16285.1;Parent=gene-IXO1088_014640;Dbxref=NCBI_GP:QIE16285.1;Name=QIE16285.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637724.1;locus_tag=IXO1088_014640;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=QIE16285.1;transl_table=11 CP040687.1 Genbank gene 3032099 3033055 . + . ID=gene-IXO1088_014645;Name=IXO1088_014645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014645 CP040687.1 Protein Homology CDS 3032099 3033055 . + 0 ID=cds-QIE16286.1;Parent=gene-IXO1088_014645;Dbxref=NCBI_GP:QIE16286.1;Name=QIE16286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007969646.1;locus_tag=IXO1088_014645;product=1-phosphofructokinase family hexose kinase;protein_id=QIE16286.1;transl_table=11 CP040687.1 Genbank gene 3033214 3034956 . + . ID=gene-IXO1088_014650;Name=IXO1088_014650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014650 CP040687.1 Protein Homology CDS 3033214 3034956 . + 0 ID=cds-QIE16287.1;Parent=gene-IXO1088_014650;Dbxref=NCBI_GP:QIE16287.1;Name=QIE16287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637726.1;locus_tag=IXO1088_014650;product=PTS fructose transporter subunit EIIBC;protein_id=QIE16287.1;transl_table=11 CP040687.1 Genbank gene 3035275 3036411 . + . ID=gene-IXO1088_014655;Name=IXO1088_014655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014655 CP040687.1 Protein Homology CDS 3035275 3036411 . + 0 ID=cds-QIE18008.1;Parent=gene-IXO1088_014655;Dbxref=NCBI_GP:QIE18008.1;Name=QIE18008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637727.1;locus_tag=IXO1088_014655;product=carbohydrate porin;protein_id=QIE18008.1;transl_table=11 CP040687.1 Genbank pseudogene 3036741 3037013 . - . ID=gene-IXO1088_014660;Name=IXO1088_014660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014660;pseudo=true CP040687.1 Protein Homology CDS 3036741 3037013 . - 0 ID=cds-IXO1088_014660;Parent=gene-IXO1088_014660;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112380.1;locus_tag=IXO1088_014660;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3037078 3038046 . + . ID=gene-IXO1088_014665;Name=IXO1088_014665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014665 CP040687.1 Protein Homology CDS 3037078 3038046 . + 0 ID=cds-QIE16288.1;Parent=gene-IXO1088_014665;Dbxref=NCBI_GP:QIE16288.1;Name=QIE16288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_014665;product=IS5-like element ISXo1 family transposase;protein_id=QIE16288.1;transl_table=11 CP040687.1 Genbank gene 3038189 3039577 . - . ID=gene-IXO1088_014670;Name=IXO1088_014670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014670 CP040687.1 Protein Homology CDS 3038189 3039577 . - 0 ID=cds-QIE16289.1;Parent=gene-IXO1088_014670;Dbxref=NCBI_GP:QIE16289.1;Name=QIE16289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408780.1;locus_tag=IXO1088_014670;product=IS701 family transposase;protein_id=QIE16289.1;transl_table=11 CP040687.1 Genbank gene 3039817 3042162 . - . ID=gene-IXO1088_014675;Name=IXO1088_014675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014675 CP040687.1 Protein Homology CDS 3039817 3042162 . - 0 ID=cds-QIE16290.1;Parent=gene-IXO1088_014675;Dbxref=NCBI_GP:QIE16290.1;Name=QIE16290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408802.1;locus_tag=IXO1088_014675;product=hypothetical protein;protein_id=QIE16290.1;transl_table=11 CP040687.1 Genbank gene 3042316 3043635 . - . ID=gene-IXO1088_014680;Name=IXO1088_014680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014680 CP040687.1 Protein Homology CDS 3042316 3043635 . - 0 ID=cds-QIE16291.1;Parent=gene-IXO1088_014680;Dbxref=NCBI_GP:QIE16291.1;Name=QIE16291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_014680;product=IS701 family transposase;protein_id=QIE16291.1;transl_table=11 CP040687.1 Genbank gene 3043835 3044803 . - . ID=gene-IXO1088_014685;Name=IXO1088_014685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014685 CP040687.1 Protein Homology CDS 3043835 3044803 . - 0 ID=cds-QIE16292.1;Parent=gene-IXO1088_014685;Dbxref=NCBI_GP:QIE16292.1;Name=QIE16292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_014685;product=IS5-like element ISXo1 family transposase;protein_id=QIE16292.1;transl_table=11 CP040687.1 Genbank pseudogene 3044806 3044880 . + . ID=gene-IXO1088_014690;Name=IXO1088_014690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014690;pseudo=true CP040687.1 Protein Homology CDS 3044806 3044880 . + 0 ID=cds-IXO1088_014690;Parent=gene-IXO1088_014690;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258967.1;locus_tag=IXO1088_014690;product=glyoxalase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3044855 3045130 . - . ID=gene-IXO1088_014695;Name=IXO1088_014695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014695 CP040687.1 Protein Homology CDS 3044855 3045130 . - 0 ID=cds-QIE16293.1;Parent=gene-IXO1088_014695;Dbxref=NCBI_GP:QIE16293.1;Name=QIE16293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445375.1;locus_tag=IXO1088_014695;product=hypothetical protein;protein_id=QIE16293.1;transl_table=11 CP040687.1 Genbank gene 3045134 3046096 . - . ID=gene-IXO1088_014700;Name=IXO1088_014700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014700 CP040687.1 Protein Homology CDS 3045134 3046096 . - 0 ID=cds-QIE16294.1;Parent=gene-IXO1088_014700;Dbxref=NCBI_GP:QIE16294.1;Name=QIE16294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1088_014700;product=IS1595-like element ISXo2 family transposase;protein_id=QIE16294.1;transl_table=11 CP040687.1 Genbank gene 3046644 3047381 . - . ID=gene-IXO1088_014705;Name=IXO1088_014705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014705 CP040687.1 Protein Homology CDS 3046644 3047381 . - 0 ID=cds-QIE16295.1;Parent=gene-IXO1088_014705;Dbxref=NCBI_GP:QIE16295.1;Name=QIE16295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408807.1;locus_tag=IXO1088_014705;product=hypothetical protein;protein_id=QIE16295.1;transl_table=11 CP040687.1 Genbank gene 3047404 3049746 . - . ID=gene-IXO1088_014710;Name=IXO1088_014710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014710 CP040687.1 Protein Homology CDS 3047404 3049746 . - 0 ID=cds-QIE16296.1;Parent=gene-IXO1088_014710;Dbxref=NCBI_GP:QIE16296.1;Name=QIE16296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408803.1;locus_tag=IXO1088_014710;product=hypothetical protein;protein_id=QIE16296.1;transl_table=11 CP040687.1 Genbank gene 3049764 3050495 . - . ID=gene-IXO1088_014715;Name=IXO1088_014715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014715 CP040687.1 Protein Homology CDS 3049764 3050495 . - 0 ID=cds-QIE16297.1;Parent=gene-IXO1088_014715;Dbxref=NCBI_GP:QIE16297.1;Name=QIE16297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503414.1;locus_tag=IXO1088_014715;product=hypothetical protein;protein_id=QIE16297.1;transl_table=11 CP040687.1 Genbank gene 3050523 3053357 . - . ID=gene-IXO1088_014720;Name=IXO1088_014720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014720 CP040687.1 Protein Homology CDS 3050523 3053357 . - 0 ID=cds-QIE18009.1;Parent=gene-IXO1088_014720;Dbxref=NCBI_GP:QIE18009.1;Name=QIE18009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408808.1;locus_tag=IXO1088_014720;product=hypothetical protein;protein_id=QIE18009.1;transl_table=11 CP040687.1 Genbank gene 3053354 3054283 . - . ID=gene-IXO1088_014725;Name=IXO1088_014725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014725 CP040687.1 Protein Homology CDS 3053354 3054283 . - 0 ID=cds-QIE16298.1;Parent=gene-IXO1088_014725;Dbxref=NCBI_GP:QIE16298.1;Name=QIE16298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444637.1;locus_tag=IXO1088_014725;product=DUF4123 domain-containing protein;protein_id=QIE16298.1;transl_table=11 CP040687.1 Genbank pseudogene 3054292 3057053 . - . ID=gene-IXO1088_014730;Name=IXO1088_014730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014730;pseudo=true CP040687.1 Protein Homology CDS 3054292 3057053 . - 0 ID=cds-IXO1088_014730;Parent=gene-IXO1088_014730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444636.1;locus_tag=IXO1088_014730;product=type VI secretion system tip protein VgrG;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3057256 3058400 . + . ID=gene-IXO1088_014735;Name=IXO1088_014735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014735;pseudo=true CP040687.1 Protein Homology CDS 3057256 3058400 . + 0 ID=cds-IXO1088_014735;Parent=gene-IXO1088_014735;Note=programmed frameshift%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=IXO1088_014735;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3058496 3058575 . + . ID=gene-IXO1088_014740;Name=IXO1088_014740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014740;pseudo=true CP040687.1 Protein Homology CDS 3058496 3058575 . + 0 ID=cds-IXO1088_014740;Parent=gene-IXO1088_014740;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161762.1;locus_tag=IXO1088_014740;product=TetR family transcriptional regulator;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3058619 3061210 . - . ID=gene-IXO1088_014745;Name=IXO1088_014745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014745 CP040687.1 Protein Homology CDS 3058619 3061210 . - 0 ID=cds-QIE16299.1;Parent=gene-IXO1088_014745;Dbxref=NCBI_GP:QIE16299.1;Name=QIE16299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408811.1;locus_tag=IXO1088_014745;product=avirulence protein;protein_id=QIE16299.1;transl_table=11 CP040687.1 Genbank gene 3061250 3061639 . - . ID=gene-IXO1088_014750;Name=IXO1088_014750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014750 CP040687.1 Protein Homology CDS 3061250 3061639 . - 0 ID=cds-QIE16300.1;Parent=gene-IXO1088_014750;Dbxref=NCBI_GP:QIE16300.1;Name=QIE16300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408812.1;locus_tag=IXO1088_014750;product=type VI secretion protein;protein_id=QIE16300.1;transl_table=11 CP040687.1 Genbank gene 3061794 3062753 . + . ID=gene-IXO1088_014755;Name=IXO1088_014755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014755 CP040687.1 Protein Homology CDS 3061794 3062753 . + 0 ID=cds-QIE16301.1;Parent=gene-IXO1088_014755;Dbxref=NCBI_GP:QIE16301.1;Name=QIE16301.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13546.4;locus_tag=IXO1088_014755;product=IS701 family transposase;protein_id=QIE16301.1;transl_table=11 CP040687.1 Genbank gene 3062686 3063000 . + . ID=gene-IXO1088_014760;Name=IXO1088_014760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014760 CP040687.1 Protein Homology CDS 3062686 3063000 . + 0 ID=cds-QIE16302.1;Parent=gene-IXO1088_014760;Dbxref=NCBI_GP:QIE16302.1;Name=QIE16302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014403016.1;locus_tag=IXO1088_014760;product=DUF1153 domain-containing protein;protein_id=QIE16302.1;transl_table=11 CP040687.1 Genbank pseudogene 3063000 3063080 . + . ID=gene-IXO1088_014765;Name=IXO1088_014765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014765;pseudo=true CP040687.1 Protein Homology CDS 3063000 3063080 . + 0 ID=cds-IXO1088_014765;Parent=gene-IXO1088_014765;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502738.1;locus_tag=IXO1088_014765;product=integrase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3063228 3064547 . + . ID=gene-IXO1088_014770;Name=IXO1088_014770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014770 CP040687.1 Protein Homology CDS 3063228 3064547 . + 0 ID=cds-QIE16303.1;Parent=gene-IXO1088_014770;Dbxref=NCBI_GP:QIE16303.1;Name=QIE16303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_014770;product=IS701 family transposase;protein_id=QIE16303.1;transl_table=11 CP040687.1 Genbank gene 3064648 3065016 . + . ID=gene-IXO1088_014775;Name=IXO1088_014775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014775 CP040687.1 Protein Homology CDS 3064648 3065016 . + 0 ID=cds-QIE16304.1;Parent=gene-IXO1088_014775;Dbxref=NCBI_GP:QIE16304.1;Name=QIE16304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010523358.1;locus_tag=IXO1088_014775;product=hypothetical protein;protein_id=QIE16304.1;transl_table=11 CP040687.1 Genbank gene 3065027 3065410 . + . ID=gene-IXO1088_014780;Name=IXO1088_014780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014780 CP040687.1 GeneMarkS-2+ CDS 3065027 3065410 . + 0 ID=cds-QIE16305.1;Parent=gene-IXO1088_014780;Dbxref=NCBI_GP:QIE16305.1;Name=QIE16305.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_014780;product=hypothetical protein;protein_id=QIE16305.1;transl_table=11 CP040687.1 Genbank pseudogene 3065681 3065869 . - . ID=gene-IXO1088_014785;Name=IXO1088_014785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014785;pseudo=true CP040687.1 Protein Homology CDS 3065681 3065869 . - 0 ID=cds-IXO1088_014785;Parent=gene-IXO1088_014785;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014403018.1;locus_tag=IXO1088_014785;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3066029 3066259 . + . ID=gene-IXO1088_014790;Name=IXO1088_014790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014790 CP040687.1 Protein Homology CDS 3066029 3066259 . + 0 ID=cds-QIE18010.1;Parent=gene-IXO1088_014790;Dbxref=NCBI_GP:QIE18010.1;Name=QIE18010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754437.1;locus_tag=IXO1088_014790;product=hypothetical protein;protein_id=QIE18010.1;transl_table=11 CP040687.1 Genbank gene 3066517 3067485 . - . ID=gene-IXO1088_014795;Name=IXO1088_014795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014795 CP040687.1 Protein Homology CDS 3066517 3067485 . - 0 ID=cds-QIE16306.1;Parent=gene-IXO1088_014795;Dbxref=NCBI_GP:QIE16306.1;Name=QIE16306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_014795;product=IS5-like element ISXo1 family transposase;protein_id=QIE16306.1;transl_table=11 CP040687.1 Genbank gene 3067741 3068703 . + . ID=gene-IXO1088_014800;Name=IXO1088_014800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014800 CP040687.1 Protein Homology CDS 3067741 3068703 . + 0 ID=cds-QIE16307.1;Parent=gene-IXO1088_014800;Dbxref=NCBI_GP:QIE16307.1;Name=QIE16307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1088_014800;product=IS1595-like element ISXo2 family transposase;protein_id=QIE16307.1;transl_table=11 CP040687.1 Genbank pseudogene 3068757 3069647 . + . ID=gene-IXO1088_014805;Name=IXO1088_014805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014805;pseudo=true CP040687.1 Protein Homology CDS 3068757 3069647 . + 0 ID=cds-IXO1088_014805;Parent=gene-IXO1088_014805;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408960.1;locus_tag=IXO1088_014805;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3069649 3070065 . - . ID=gene-IXO1088_014810;Name=IXO1088_014810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014810 CP040687.1 Protein Homology CDS 3069649 3070065 . - 0 ID=cds-QIE16308.1;Parent=gene-IXO1088_014810;Dbxref=NCBI_GP:QIE16308.1;Name=QIE16308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637261.1;locus_tag=IXO1088_014810;product=type I toxin-antitoxin system SymE family toxin;protein_id=QIE16308.1;transl_table=11 CP040687.1 Genbank gene 3070062 3070370 . - . ID=gene-IXO1088_014815;Name=IXO1088_014815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014815 CP040687.1 Protein Homology CDS 3070062 3070370 . - 0 ID=cds-QIE16309.1;Parent=gene-IXO1088_014815;Dbxref=NCBI_GP:QIE16309.1;Name=QIE16309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016944438.1;locus_tag=IXO1088_014815;product=hypothetical protein;protein_id=QIE16309.1;transl_table=11 CP040687.1 Genbank pseudogene 3070312 3070684 . + . ID=gene-IXO1088_014820;Name=IXO1088_014820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014820;pseudo=true CP040687.1 Protein Homology CDS 3070312 3070684 . + 0 ID=cds-IXO1088_014820;Parent=gene-IXO1088_014820;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637260.1;locus_tag=IXO1088_014820;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3070941 3071207 . + . ID=gene-IXO1088_014825;Name=IXO1088_014825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014825 CP040687.1 Protein Homology CDS 3070941 3071207 . + 0 ID=cds-QIE16310.1;Parent=gene-IXO1088_014825;Dbxref=NCBI_GP:QIE16310.1;Name=QIE16310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017355064.1;locus_tag=IXO1088_014825;product=site-specific DNA-methyltransferase;protein_id=QIE16310.1;transl_table=11 CP040687.1 Genbank gene 3071280 3071654 . - . ID=gene-IXO1088_014830;Name=IXO1088_014830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014830 CP040687.1 Protein Homology CDS 3071280 3071654 . - 0 ID=cds-QIE16311.1;Parent=gene-IXO1088_014830;Dbxref=NCBI_GP:QIE16311.1;Name=QIE16311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005420601.1;locus_tag=IXO1088_014830;product=ASCH domain-containing protein;protein_id=QIE16311.1;transl_table=11 CP040687.1 Genbank gene 3071626 3072693 . - . ID=gene-IXO1088_014835;Name=IXO1088_014835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014835 CP040687.1 Protein Homology CDS 3071626 3072693 . - 0 ID=cds-QIE16312.1;Parent=gene-IXO1088_014835;Dbxref=NCBI_GP:QIE16312.1;Name=QIE16312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005420600.1;locus_tag=IXO1088_014835;product=GNAT family N-acetyltransferase;protein_id=QIE16312.1;transl_table=11 CP040687.1 Genbank gene 3073083 3076124 . - . ID=gene-IXO1088_014840;Name=IXO1088_014840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014840 CP040687.1 Protein Homology CDS 3073083 3076124 . - 0 ID=cds-QIE18011.1;Parent=gene-IXO1088_014840;Dbxref=NCBI_GP:QIE18011.1;Name=QIE18011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637257.1;locus_tag=IXO1088_014840;product=TonB-dependent receptor;protein_id=QIE18011.1;transl_table=11 CP040687.1 Genbank gene 3077174 3077626 . + . ID=gene-IXO1088_014845;Name=IXO1088_014845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014845 CP040687.1 Protein Homology CDS 3077174 3077626 . + 0 ID=cds-QIE18012.1;Parent=gene-IXO1088_014845;Dbxref=NCBI_GP:QIE18012.1;Name=QIE18012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302875.1;locus_tag=IXO1088_014845;product=hypothetical protein;protein_id=QIE18012.1;transl_table=11 CP040687.1 Genbank gene 3077881 3079686 . + . ID=gene-IXO1088_014850;Name=IXO1088_014850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014850 CP040687.1 Protein Homology CDS 3077881 3079686 . + 0 ID=cds-QIE16313.1;Parent=gene-IXO1088_014850;Dbxref=NCBI_GP:QIE16313.1;Name=QIE16313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408823.1;locus_tag=IXO1088_014850;product=TonB-dependent receptor;protein_id=QIE16313.1;transl_table=11 CP040687.1 Genbank gene 3079688 3080035 . + . ID=gene-IXO1088_014855;Name=IXO1088_014855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014855 CP040687.1 GeneMarkS-2+ CDS 3079688 3080035 . + 0 ID=cds-QIE16314.1;Parent=gene-IXO1088_014855;Dbxref=NCBI_GP:QIE16314.1;Name=QIE16314.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_014855;product=hypothetical protein;protein_id=QIE16314.1;transl_table=11 CP040687.1 Genbank gene 3080111 3080818 . + . ID=gene-IXO1088_014860;Name=IXO1088_014860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014860 CP040687.1 Protein Homology CDS 3080111 3080818 . + 0 ID=cds-QIE16315.1;Parent=gene-IXO1088_014860;Dbxref=NCBI_GP:QIE16315.1;Name=QIE16315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444621.1;locus_tag=IXO1088_014860;product=superoxide dismutase;protein_id=QIE16315.1;transl_table=11 CP040687.1 Genbank gene 3080970 3081362 . + . ID=gene-IXO1088_014865;Name=IXO1088_014865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014865 CP040687.1 Protein Homology CDS 3080970 3081362 . + 0 ID=cds-QIE16316.1;Parent=gene-IXO1088_014865;Dbxref=NCBI_GP:QIE16316.1;Name=QIE16316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408825.1;locus_tag=IXO1088_014865;product=TonB-dependent receptor;protein_id=QIE16316.1;transl_table=11 CP040687.1 Genbank gene 3081385 3081900 . + . ID=gene-IXO1088_014870;Name=IXO1088_014870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014870 CP040687.1 Protein Homology CDS 3081385 3081900 . + 0 ID=cds-QIE18013.1;Parent=gene-IXO1088_014870;Dbxref=NCBI_GP:QIE18013.1;Name=QIE18013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408826.1;locus_tag=IXO1088_014870;product=TonB-dependent receptor;protein_id=QIE18013.1;transl_table=11 CP040687.1 Genbank gene 3081897 3082250 . + . ID=gene-IXO1088_014875;Name=IXO1088_014875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014875 CP040687.1 GeneMarkS-2+ CDS 3081897 3082250 . + 0 ID=cds-QIE16317.1;Parent=gene-IXO1088_014875;Dbxref=NCBI_GP:QIE16317.1;Name=QIE16317.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_014875;product=hypothetical protein;protein_id=QIE16317.1;transl_table=11 CP040687.1 Genbank gene 3082339 3083079 . + . ID=gene-IXO1088_014880;Name=IXO1088_014880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014880 CP040687.1 Protein Homology CDS 3082339 3083079 . + 0 ID=cds-QIE16318.1;Parent=gene-IXO1088_014880;Dbxref=NCBI_GP:QIE16318.1;Name=QIE16318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637256.1;locus_tag=IXO1088_014880;product=flagellar motor protein;protein_id=QIE16318.1;transl_table=11 CP040687.1 Genbank gene 3083086 3083946 . + . ID=gene-IXO1088_014885;Name=motD;gbkey=Gene;gene=motD;gene_biotype=protein_coding;locus_tag=IXO1088_014885 CP040687.1 Protein Homology CDS 3083086 3083946 . + 0 ID=cds-QIE16319.1;Parent=gene-IXO1088_014885;Dbxref=NCBI_GP:QIE16319.1;Name=QIE16319.1;gbkey=CDS;gene=motD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444616.1;locus_tag=IXO1088_014885;product=flagellar motor protein MotD;protein_id=QIE16319.1;transl_table=11 CP040687.1 Genbank gene 3084062 3084844 . + . ID=gene-IXO1088_014890;Name=IXO1088_014890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014890 CP040687.1 Protein Homology CDS 3084062 3084844 . + 0 ID=cds-QIE16320.1;Parent=gene-IXO1088_014890;Dbxref=NCBI_GP:QIE16320.1;Name=QIE16320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637254.2;locus_tag=IXO1088_014890;product=ParA family protein;protein_id=QIE16320.1;transl_table=11 CP040687.1 Genbank gene 3084841 3085863 . + . ID=gene-IXO1088_014895;Name=IXO1088_014895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014895 CP040687.1 Protein Homology CDS 3084841 3085863 . + 0 ID=cds-QIE16321.1;Parent=gene-IXO1088_014895;Dbxref=NCBI_GP:QIE16321.1;Name=QIE16321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112586.1;locus_tag=IXO1088_014895;product=chemotaxis protein CheW;protein_id=QIE16321.1;transl_table=11 CP040687.1 Genbank gene 3085964 3086272 . + . ID=gene-IXO1088_014900;Name=IXO1088_014900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014900 CP040687.1 Protein Homology CDS 3085964 3086272 . + 0 ID=cds-QIE16322.1;Parent=gene-IXO1088_014900;Dbxref=NCBI_GP:QIE16322.1;Name=QIE16322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637252.1;locus_tag=IXO1088_014900;product=STAS domain-containing protein;protein_id=QIE16322.1;transl_table=11 CP040687.1 Genbank gene 3086269 3086634 . + . ID=gene-IXO1088_014905;Name=IXO1088_014905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014905 CP040687.1 Protein Homology CDS 3086269 3086634 . + 0 ID=cds-QIE16323.1;Parent=gene-IXO1088_014905;Dbxref=NCBI_GP:QIE16323.1;Name=QIE16323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806565.1;locus_tag=IXO1088_014905;product=response regulator;protein_id=QIE16323.1;transl_table=11 CP040687.1 Genbank gene 3086668 3088677 . + . ID=gene-IXO1088_014910;Name=IXO1088_014910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014910 CP040687.1 Protein Homology CDS 3086668 3088677 . + 0 ID=cds-QIE16324.1;Parent=gene-IXO1088_014910;Dbxref=NCBI_GP:QIE16324.1;Name=QIE16324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637250.1;locus_tag=IXO1088_014910;product=chemotaxis protein CheA;protein_id=QIE16324.1;transl_table=11 CP040687.1 Genbank pseudogene 3088726 3088788 . + . ID=gene-IXO1088_014915;Name=IXO1088_014915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014915;pseudo=true CP040687.1 Protein Homology CDS 3088726 3088788 . + 0 ID=cds-IXO1088_014915;Parent=gene-IXO1088_014915;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968782.1;locus_tag=IXO1088_014915;product=conjugal transfer protein TraA;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3089313 3090269 . + . ID=gene-IXO1088_014920;Name=IXO1088_014920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014920;pseudo=true CP040687.1 Protein Homology CDS 3089313 3090269 . + 0 ID=cds-IXO1088_014920;Parent=gene-IXO1088_014920;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1088_014920;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3090270 3090737 . + . ID=gene-IXO1088_014925;Name=IXO1088_014925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014925 CP040687.1 Protein Homology CDS 3090270 3090737 . + 0 ID=cds-QIE16325.1;Parent=gene-IXO1088_014925;Dbxref=NCBI_GP:QIE16325.1;Name=QIE16325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118091.1;locus_tag=IXO1088_014925;product=chemotaxis protein;protein_id=QIE16325.1;transl_table=11 CP040687.1 Genbank gene 3090725 3091759 . - . ID=gene-IXO1088_014930;Name=IXO1088_014930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014930 CP040687.1 Protein Homology CDS 3090725 3091759 . - 0 ID=cds-QIE18014.1;Parent=gene-IXO1088_014930;Dbxref=NCBI_GP:QIE18014.1;Name=QIE18014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611268.1;locus_tag=IXO1088_014930;product=IS630 family transposase;protein_id=QIE18014.1;transl_table=11 CP040687.1 Genbank gene 3091894 3092583 . + . ID=gene-IXO1088_014935;Name=IXO1088_014935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014935 CP040687.1 Protein Homology CDS 3091894 3092583 . + 0 ID=cds-QIE16326.1;Parent=gene-IXO1088_014935;Dbxref=NCBI_GP:QIE16326.1;Name=QIE16326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259424.1;locus_tag=IXO1088_014935;product=chemotaxis protein;protein_id=QIE16326.1;transl_table=11 CP040687.1 Genbank pseudogene 3092713 3092902 . + . ID=gene-IXO1088_014940;Name=IXO1088_014940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_014940;pseudo=true CP040687.1 Protein Homology CDS 3092713 3092902 . + 0 ID=cds-IXO1088_014940;Parent=gene-IXO1088_014940;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005931832.1;locus_tag=IXO1088_014940;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3092899 3093660 . + . ID=gene-IXO1088_014945;Name=IXO1088_014945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014945 CP040687.1 Protein Homology CDS 3092899 3093660 . + 0 ID=cds-QIE16327.1;Parent=gene-IXO1088_014945;Dbxref=NCBI_GP:QIE16327.1;Name=QIE16327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806505.1;locus_tag=IXO1088_014945;product=transporter;protein_id=QIE16327.1;transl_table=11 CP040687.1 Genbank gene 3093674 3096016 . + . ID=gene-IXO1088_014950;Name=IXO1088_014950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014950 CP040687.1 Protein Homology CDS 3093674 3096016 . + 0 ID=cds-QIE16328.1;Parent=gene-IXO1088_014950;Dbxref=NCBI_GP:QIE16328.1;Name=QIE16328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408834.1;locus_tag=IXO1088_014950;product=methyl-accepting chemotaxis protein;protein_id=QIE16328.1;transl_table=11 CP040687.1 Genbank gene 3096513 3097478 . + . ID=gene-IXO1088_014955;Name=IXO1088_014955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014955 CP040687.1 Protein Homology CDS 3096513 3097478 . + 0 ID=cds-QIE16329.1;Parent=gene-IXO1088_014955;Dbxref=NCBI_GP:QIE16329.1;Name=QIE16329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_014955;product=IS1595-like element ISXo5 family transposase;protein_id=QIE16329.1;transl_table=11 CP040687.1 Genbank gene 3097718 3099964 . + . ID=gene-IXO1088_014960;Name=IXO1088_014960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014960 CP040687.1 Protein Homology CDS 3097718 3099964 . + 0 ID=cds-QIE16330.1;Parent=gene-IXO1088_014960;Dbxref=NCBI_GP:QIE16330.1;Name=QIE16330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113509.1;locus_tag=IXO1088_014960;product=HAMP domain-containing protein;protein_id=QIE16330.1;transl_table=11 CP040687.1 Genbank gene 3100180 3100256 . + . ID=gene-IXO1088_014965;Name=IXO1088_014965;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_014965 CP040687.1 cmsearch ncRNA 3100180 3100256 . + . ID=rna-IXO1088_014965;Parent=gene-IXO1088_014965;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_014965;product=sX9 sRNA CP040687.1 cmsearch exon 3100180 3100256 . + . ID=exon-IXO1088_014965-1;Parent=rna-IXO1088_014965;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_014965;product=sX9 sRNA CP040687.1 Genbank gene 3100692 3102803 . + . ID=gene-IXO1088_014970;Name=IXO1088_014970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014970 CP040687.1 Protein Homology CDS 3100692 3102803 . + 0 ID=cds-QIE18015.1;Parent=gene-IXO1088_014970;Dbxref=NCBI_GP:QIE18015.1;Name=QIE18015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155257.1;locus_tag=IXO1088_014970;product=HAMP domain-containing protein;protein_id=QIE18015.1;transl_table=11 CP040687.1 Genbank gene 3103488 3105563 . + . ID=gene-IXO1088_014975;Name=IXO1088_014975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014975 CP040687.1 Protein Homology CDS 3103488 3105563 . + 0 ID=cds-QIE16331.1;Parent=gene-IXO1088_014975;Dbxref=NCBI_GP:QIE16331.1;Name=QIE16331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444606.1;locus_tag=IXO1088_014975;product=HAMP domain-containing protein;protein_id=QIE16331.1;transl_table=11 CP040687.1 Genbank gene 3106158 3108419 . + . ID=gene-IXO1088_014980;Name=IXO1088_014980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014980 CP040687.1 Protein Homology CDS 3106158 3108419 . + 0 ID=cds-QIE16332.1;Parent=gene-IXO1088_014980;Dbxref=NCBI_GP:QIE16332.1;Name=QIE16332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637240.2;locus_tag=IXO1088_014980;product=methyl-accepting chemotaxis protein;protein_id=QIE16332.1;transl_table=11 CP040687.1 Genbank gene 3108813 3111074 . + . ID=gene-IXO1088_014985;Name=IXO1088_014985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014985 CP040687.1 Protein Homology CDS 3108813 3111074 . + 0 ID=cds-QIE16333.1;Parent=gene-IXO1088_014985;Dbxref=NCBI_GP:QIE16333.1;Name=QIE16333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155262.1;locus_tag=IXO1088_014985;product=HAMP domain-containing protein;protein_id=QIE16333.1;transl_table=11 CP040687.1 Genbank gene 3111685 3111761 . + . ID=gene-IXO1088_014990;Name=IXO1088_014990;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_014990 CP040687.1 cmsearch ncRNA 3111685 3111761 . + . ID=rna-IXO1088_014990;Parent=gene-IXO1088_014990;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_014990;product=sX9 sRNA CP040687.1 cmsearch exon 3111685 3111761 . + . ID=exon-IXO1088_014990-1;Parent=rna-IXO1088_014990;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_014990;product=sX9 sRNA CP040687.1 Genbank gene 3111753 3111962 . + . ID=gene-IXO1088_014995;Name=IXO1088_014995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_014995 CP040687.1 Protein Homology CDS 3111753 3111962 . + 0 ID=cds-QIE16334.1;Parent=gene-IXO1088_014995;Dbxref=NCBI_GP:QIE16334.1;Name=QIE16334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118760.1;locus_tag=IXO1088_014995;product=hypothetical protein;protein_id=QIE16334.1;transl_table=11 CP040687.1 Genbank gene 3112032 3112829 . + . ID=gene-IXO1088_015000;Name=IXO1088_015000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015000 CP040687.1 Protein Homology CDS 3112032 3112829 . + 0 ID=cds-QIE16335.1;Parent=gene-IXO1088_015000;Dbxref=NCBI_GP:QIE16335.1;Name=QIE16335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637237.1;locus_tag=IXO1088_015000;product=pilus assembly protein PilZ;protein_id=QIE16335.1;transl_table=11 CP040687.1 Genbank gene 3112965 3113447 . + . ID=gene-IXO1088_015005;Name=IXO1088_015005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015005 CP040687.1 Protein Homology CDS 3112965 3113447 . + 0 ID=cds-QIE16336.1;Parent=gene-IXO1088_015005;Dbxref=NCBI_GP:QIE16336.1;Name=QIE16336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637236.1;locus_tag=IXO1088_015005;product=chemotaxis protein CheW;protein_id=QIE16336.1;transl_table=11 CP040687.1 Genbank pseudogene 3113677 3114252 . - . ID=gene-IXO1088_015010;Name=IXO1088_015010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_015010;pseudo=true CP040687.1 Protein Homology CDS 3113677 3114252 . - 0 ID=cds-IXO1088_015010;Parent=gene-IXO1088_015010;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_015010;product=IS701-like element ISXo15 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3114296 3115094 . + . ID=gene-IXO1088_015015;Name=IXO1088_015015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015015 CP040687.1 Protein Homology CDS 3114296 3114567 . + 0 ID=cds-QIE16337.1;Parent=gene-IXO1088_015015;Dbxref=NCBI_GP:QIE16337.1;Name=QIE16337.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_015015;product=IS5 family transposase;protein_id=QIE16337.1;transl_table=11 CP040687.1 Protein Homology CDS 3114566 3115094 . + 1 ID=cds-QIE16337.1;Parent=gene-IXO1088_015015;Dbxref=NCBI_GP:QIE16337.1;Name=QIE16337.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_015015;product=IS5 family transposase;protein_id=QIE16337.1;transl_table=11 CP040687.1 Genbank gene 3115355 3115660 . + . ID=gene-IXO1088_015020;Name=IXO1088_015020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015020 CP040687.1 Protein Homology CDS 3115355 3115660 . + 0 ID=cds-QIE18016.1;Parent=gene-IXO1088_015020;Dbxref=NCBI_GP:QIE18016.1;Name=QIE18016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017910574.1;locus_tag=IXO1088_015020;product=hypothetical protein;protein_id=QIE18016.1;transl_table=11 CP040687.1 Genbank gene 3115917 3116951 . + . ID=gene-IXO1088_015025;Name=IXO1088_015025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015025 CP040687.1 Protein Homology CDS 3115917 3116951 . + 0 ID=cds-QIE18017.1;Parent=gene-IXO1088_015025;Dbxref=NCBI_GP:QIE18017.1;Name=QIE18017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611268.1;locus_tag=IXO1088_015025;product=IS630 family transposase;protein_id=QIE18017.1;transl_table=11 CP040687.1 Genbank pseudogene 3116972 3119245 . + . ID=gene-IXO1088_015030;Name=IXO1088_015030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_015030;pseudo=true CP040687.1 Protein Homology CDS 3116972 3119245 . + 0 ID=cds-IXO1088_015030;Parent=gene-IXO1088_015030;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637234.1;locus_tag=IXO1088_015030;product=HAMP domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3119491 3120357 . + . ID=gene-IXO1088_015035;Name=IXO1088_015035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015035 CP040687.1 Protein Homology CDS 3119491 3120357 . + 0 ID=cds-QIE16338.1;Parent=gene-IXO1088_015035;Dbxref=NCBI_GP:QIE16338.1;Name=QIE16338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637233.1;locus_tag=IXO1088_015035;product=chemotaxis protein CheR;protein_id=QIE16338.1;transl_table=11 CP040687.1 Genbank gene 3120354 3120950 . + . ID=gene-IXO1088_015040;Name=cheD;gbkey=Gene;gene=cheD;gene_biotype=protein_coding;locus_tag=IXO1088_015040 CP040687.1 Protein Homology CDS 3120354 3120950 . + 0 ID=cds-QIE16339.1;Parent=gene-IXO1088_015040;Dbxref=NCBI_GP:QIE16339.1;Name=QIE16339.1;gbkey=CDS;gene=cheD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637232.1;locus_tag=IXO1088_015040;product=chemoreceptor glutamine deamidase CheD;protein_id=QIE16339.1;transl_table=11 CP040687.1 Genbank gene 3120947 3122023 . + . ID=gene-IXO1088_015045;Name=IXO1088_015045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015045 CP040687.1 Protein Homology CDS 3120947 3122023 . + 0 ID=cds-QIE16340.1;Parent=gene-IXO1088_015045;Dbxref=NCBI_GP:QIE16340.1;Name=QIE16340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637231.1;locus_tag=IXO1088_015045;product=chemotaxis response regulator protein-glutamate methylesterase;protein_id=QIE16340.1;transl_table=11 CP040687.1 Genbank gene 3122132 3124375 . + . ID=gene-IXO1088_015050;Name=IXO1088_015050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015050 CP040687.1 Protein Homology CDS 3122132 3124375 . + 0 ID=cds-QIE16341.1;Parent=gene-IXO1088_015050;Dbxref=NCBI_GP:QIE16341.1;Name=QIE16341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408846.1;locus_tag=IXO1088_015050;product=EAL domain-containing protein;protein_id=QIE16341.1;transl_table=11 CP040687.1 Genbank gene 3124467 3124543 . - . ID=gene-IXO1088_015055;Name=IXO1088_015055;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_015055 CP040687.1 cmsearch ncRNA 3124467 3124543 . - . ID=rna-IXO1088_015055;Parent=gene-IXO1088_015055;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_015055;product=sX9 sRNA CP040687.1 cmsearch exon 3124467 3124543 . - . ID=exon-IXO1088_015055-1;Parent=rna-IXO1088_015055;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_015055;product=sX9 sRNA CP040687.1 Genbank pseudogene 3124598 3124942 . - . ID=gene-IXO1088_015060;Name=IXO1088_015060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_015060;pseudo=true CP040687.1 Protein Homology CDS 3124598 3124942 . - 0 ID=cds-IXO1088_015060;Parent=gene-IXO1088_015060;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113526.1;locus_tag=IXO1088_015060;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3125031 3125846 . - . ID=gene-IXO1088_015065;Name=IXO1088_015065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015065 CP040687.1 Protein Homology CDS 3125031 3125846 . - 0 ID=cds-QIE16342.1;Parent=gene-IXO1088_015065;Dbxref=NCBI_GP:QIE16342.1;Name=QIE16342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259442.1;locus_tag=IXO1088_015065;product=alpha/beta fold hydrolase;protein_id=QIE16342.1;transl_table=11 CP040687.1 Genbank gene 3126200 3128791 . - . ID=gene-IXO1088_015070;Name=IXO1088_015070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015070 CP040687.1 Protein Homology CDS 3126200 3128791 . - 0 ID=cds-QIE16343.1;Parent=gene-IXO1088_015070;Dbxref=NCBI_GP:QIE16343.1;Name=QIE16343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017908727.1;locus_tag=IXO1088_015070;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=QIE16343.1;transl_table=11 CP040687.1 Genbank gene 3128857 3129267 . - . ID=gene-IXO1088_015075;Name=IXO1088_015075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015075 CP040687.1 Protein Homology CDS 3128857 3129267 . - 0 ID=cds-QIE16344.1;Parent=gene-IXO1088_015075;Dbxref=NCBI_GP:QIE16344.1;Name=QIE16344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259444.1;locus_tag=IXO1088_015075;product=type II toxin-antitoxin system VapC family toxin;protein_id=QIE16344.1;transl_table=11 CP040687.1 Genbank gene 3129264 3129512 . - . ID=gene-IXO1088_015080;Name=IXO1088_015080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015080 CP040687.1 Protein Homology CDS 3129264 3129512 . - 0 ID=cds-QIE16345.1;Parent=gene-IXO1088_015080;Dbxref=NCBI_GP:QIE16345.1;Name=QIE16345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637226.1;locus_tag=IXO1088_015080;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=QIE16345.1;transl_table=11 CP040687.1 Genbank gene 3129660 3132428 . + . ID=gene-IXO1088_015085;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=IXO1088_015085 CP040687.1 Protein Homology CDS 3129660 3132428 . + 0 ID=cds-QIE16346.1;Parent=gene-IXO1088_015085;Dbxref=NCBI_GP:QIE16346.1;Name=QIE16346.1;gbkey=CDS;gene=acnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637225.1;locus_tag=IXO1088_015085;product=aconitate hydratase AcnA;protein_id=QIE16346.1;transl_table=11 CP040687.1 Genbank pseudogene 3132551 3132980 . - . ID=gene-IXO1088_015090;Name=IXO1088_015090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_015090;pseudo=true CP040687.1 Protein Homology CDS 3132551 3132980 . - 0 ID=cds-IXO1088_015090;Parent=gene-IXO1088_015090;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155275.1;locus_tag=IXO1088_015090;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3133078 3134760 . + . ID=gene-IXO1088_015095;Name=IXO1088_015095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015095 CP040687.1 Protein Homology CDS 3133078 3134760 . + 0 ID=cds-QIE16347.1;Parent=gene-IXO1088_015095;Dbxref=NCBI_GP:QIE16347.1;Name=QIE16347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571491.1;locus_tag=IXO1088_015095;product=long-chain fatty acid--CoA ligase;protein_id=QIE16347.1;transl_table=11 CP040687.1 Genbank gene 3134937 3135806 . + . ID=gene-IXO1088_015100;Name=IXO1088_015100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015100 CP040687.1 Protein Homology CDS 3134937 3135806 . + 0 ID=cds-QIE18018.1;Parent=gene-IXO1088_015100;Dbxref=NCBI_GP:QIE18018.1;Name=QIE18018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637222.1;locus_tag=IXO1088_015100;product=enoyl-CoA hydratase;protein_id=QIE18018.1;transl_table=11 CP040687.1 Genbank gene 3135818 3137995 . - . ID=gene-IXO1088_015105;Name=IXO1088_015105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015105 CP040687.1 Protein Homology CDS 3135818 3137995 . - 0 ID=cds-QIE16348.1;Parent=gene-IXO1088_015105;Dbxref=NCBI_GP:QIE16348.1;Name=QIE16348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637221.1;locus_tag=IXO1088_015105;product=response regulator;protein_id=QIE16348.1;transl_table=11 CP040687.1 Genbank gene 3138020 3138358 . - . ID=gene-IXO1088_015110;Name=IXO1088_015110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015110 CP040687.1 Protein Homology CDS 3138020 3138358 . - 0 ID=cds-QIE16349.1;Parent=gene-IXO1088_015110;Dbxref=NCBI_GP:QIE16349.1;Name=QIE16349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019299972.1;locus_tag=IXO1088_015110;product=hypothetical protein;protein_id=QIE16349.1;transl_table=11 CP040687.1 Genbank gene 3138360 3139496 . - . ID=gene-IXO1088_015115;Name=IXO1088_015115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015115 CP040687.1 Protein Homology CDS 3138360 3139496 . - 0 ID=cds-QIE16350.1;Parent=gene-IXO1088_015115;Dbxref=NCBI_GP:QIE16350.1;Name=QIE16350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637219.1;locus_tag=IXO1088_015115;product=two-component system response regulator;protein_id=QIE16350.1;transl_table=11 CP040687.1 Genbank gene 3139638 3141155 . - . ID=gene-IXO1088_015120;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=IXO1088_015120 CP040687.1 Protein Homology CDS 3139638 3141155 . - 0 ID=cds-QIE16351.1;Parent=gene-IXO1088_015120;Dbxref=NCBI_GP:QIE16351.1;Name=QIE16351.1;gbkey=CDS;gene=lysS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486300.1;locus_tag=IXO1088_015120;product=lysine--tRNA ligase;protein_id=QIE16351.1;transl_table=11 CP040687.1 Genbank gene 3141359 3142484 . - . ID=gene-IXO1088_015125;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=IXO1088_015125 CP040687.1 Protein Homology CDS 3142410 3142484 . - 0 ID=cds-QIE16352.1;Parent=gene-IXO1088_015125;Dbxref=NCBI_GP:QIE16352.1;Name=QIE16352.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;gene=prfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014037064.1;locus_tag=IXO1088_015125;product=peptide chain release factor 2;protein_id=QIE16352.1;transl_table=11 CP040687.1 Protein Homology CDS 3141359 3142408 . - 0 ID=cds-QIE16352.1;Parent=gene-IXO1088_015125;Dbxref=NCBI_GP:QIE16352.1;Name=QIE16352.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;gene=prfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014037064.1;locus_tag=IXO1088_015125;product=peptide chain release factor 2;protein_id=QIE16352.1;transl_table=11 CP040687.1 Genbank gene 3142738 3143685 . - . ID=gene-IXO1088_015130;Name=IXO1088_015130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015130 CP040687.1 Protein Homology CDS 3142738 3143685 . - 0 ID=cds-QIE16353.1;Parent=gene-IXO1088_015130;Dbxref=NCBI_GP:QIE16353.1;Name=QIE16353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155283.1;locus_tag=IXO1088_015130;product=LytTR family transcriptional regulator;protein_id=QIE16353.1;transl_table=11 CP040687.1 Genbank pseudogene 3143845 3145096 . + . ID=gene-IXO1088_015135;Name=IXO1088_015135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_015135;pseudo=true CP040687.1 Protein Homology CDS 3143845 3145096 . + 0 ID=cds-IXO1088_015135;Parent=gene-IXO1088_015135;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259456.1;locus_tag=IXO1088_015135;product=acyltransferase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3144979 3145941 . + . ID=gene-IXO1088_015140;Name=IXO1088_015140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_015140;pseudo=true CP040687.1 Protein Homology CDS 3144979 3145941 . + 0 ID=cds-IXO1088_015140;Parent=gene-IXO1088_015140;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010378466.1;locus_tag=IXO1088_015140;product=DUF1176 domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3146494 3147195 . + . ID=gene-IXO1088_015145;Name=IXO1088_015145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015145 CP040687.1 Protein Homology CDS 3146494 3147195 . + 0 ID=cds-QIE16354.1;Parent=gene-IXO1088_015145;Dbxref=NCBI_GP:QIE16354.1;Name=QIE16354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259457.1;locus_tag=IXO1088_015145;product=DDE transposase;protein_id=QIE16354.1;transl_table=11 CP040687.1 Genbank pseudogene 3147207 3147323 . + . ID=gene-IXO1088_015150;Name=IXO1088_015150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_015150;pseudo=true CP040687.1 Protein Homology CDS 3147207 3147323 . + 0 ID=cds-IXO1088_015150;Parent=gene-IXO1088_015150;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003159187.1;locus_tag=IXO1088_015150;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3147356 3147733 . - . ID=gene-IXO1088_015155;Name=IXO1088_015155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015155 CP040687.1 Protein Homology CDS 3147356 3147733 . - 0 ID=cds-QIE16355.1;Parent=gene-IXO1088_015155;Dbxref=NCBI_GP:QIE16355.1;Name=QIE16355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004666662.1;locus_tag=IXO1088_015155;product=hypothetical protein;protein_id=QIE16355.1;transl_table=11 CP040687.1 Genbank gene 3148028 3148984 . - . ID=gene-IXO1088_015160;Name=IXO1088_015160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015160 CP040687.1 Protein Homology CDS 3148028 3148984 . - 0 ID=cds-QIE16356.1;Parent=gene-IXO1088_015160;Dbxref=NCBI_GP:QIE16356.1;Name=QIE16356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=IXO1088_015160;product=IS30-like element IS1112a family transposase;protein_id=QIE16356.1;transl_table=11 CP040687.1 Genbank pseudogene 3149324 3150289 . - . ID=gene-IXO1088_015165;Name=IXO1088_015165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_015165;pseudo=true CP040687.1 Protein Homology CDS 3149324 3150289 . - 0 ID=cds-IXO1088_015165;Parent=gene-IXO1088_015165;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_015165;product=IS1595 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3150378 3150650 . - . ID=gene-IXO1088_015170;Name=IXO1088_015170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_015170;pseudo=true CP040687.1 Protein Homology CDS 3150378 3150650 . - 0 ID=cds-IXO1088_015170;Parent=gene-IXO1088_015170;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167297.1;locus_tag=IXO1088_015170;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3150796 3151008 . - . ID=gene-IXO1088_015175;Name=IXO1088_015175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_015175;pseudo=true CP040687.1 Protein Homology CDS 3150796 3151008 . - 0 ID=cds-IXO1088_015175;Parent=gene-IXO1088_015175;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158821.1;locus_tag=IXO1088_015175;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3151037 3152776 . - . ID=gene-IXO1088_015180;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=IXO1088_015180 CP040687.1 Protein Homology CDS 3151037 3152776 . - 0 ID=cds-QIE16357.1;Parent=gene-IXO1088_015180;Dbxref=NCBI_GP:QIE16357.1;Name=QIE16357.1;gbkey=CDS;gene=recJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259460.1;locus_tag=IXO1088_015180;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=QIE16357.1;transl_table=11 CP040687.1 Genbank gene 3152773 3153693 . - . ID=gene-IXO1088_015185;Name=IXO1088_015185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015185 CP040687.1 Protein Homology CDS 3152773 3153693 . - 0 ID=cds-QIE16358.1;Parent=gene-IXO1088_015185;Dbxref=NCBI_GP:QIE16358.1;Name=QIE16358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637210.1;locus_tag=IXO1088_015185;product=phosphoglycerate mutase;protein_id=QIE16358.1;transl_table=11 CP040687.1 Genbank gene 3153710 3154186 . - . ID=gene-IXO1088_015190;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=IXO1088_015190 CP040687.1 Protein Homology CDS 3153710 3154186 . - 0 ID=cds-QIE16359.1;Parent=gene-IXO1088_015190;Dbxref=NCBI_GP:QIE16359.1;Name=QIE16359.1;gbkey=CDS;gene=greA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637209.1;locus_tag=IXO1088_015190;product=transcription elongation factor GreA;protein_id=QIE16359.1;transl_table=11 CP040687.1 Genbank gene 3154183 3157425 . - . ID=gene-IXO1088_015195;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=IXO1088_015195 CP040687.1 Protein Homology CDS 3154183 3157425 . - 0 ID=cds-QIE16360.1;Parent=gene-IXO1088_015195;Dbxref=NCBI_GP:QIE16360.1;Name=QIE16360.1;gbkey=CDS;gene=carB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637208.1;locus_tag=IXO1088_015195;product=carbamoyl-phosphate synthase large subunit;protein_id=QIE16360.1;transl_table=11 CP040687.1 Genbank gene 3157434 3157877 . - . ID=gene-IXO1088_015200;Name=IXO1088_015200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015200 CP040687.1 Protein Homology CDS 3157434 3157877 . - 0 ID=cds-QIE16361.1;Parent=gene-IXO1088_015200;Dbxref=NCBI_GP:QIE16361.1;Name=QIE16361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486285.1;locus_tag=IXO1088_015200;product=hypothetical protein;protein_id=QIE16361.1;transl_table=11 CP040687.1 Genbank gene 3157877 3159001 . - . ID=gene-IXO1088_015205;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=IXO1088_015205 CP040687.1 Protein Homology CDS 3157877 3159001 . - 0 ID=cds-QIE16362.1;Parent=gene-IXO1088_015205;Dbxref=NCBI_GP:QIE16362.1;Name=QIE16362.1;gbkey=CDS;gene=carA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851215.1;locus_tag=IXO1088_015205;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=QIE16362.1;transl_table=11 CP040687.1 Genbank gene 3159241 3159957 . - . ID=gene-IXO1088_015210;Name=IXO1088_015210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015210 CP040687.1 Protein Homology CDS 3159241 3159957 . - 0 ID=cds-QIE16363.1;Parent=gene-IXO1088_015210;Dbxref=NCBI_GP:QIE16363.1;Name=QIE16363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637205.1;locus_tag=IXO1088_015210;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=QIE16363.1;transl_table=11 CP040687.1 Genbank gene 3160367 3161130 . - . ID=gene-IXO1088_015215;Name=IXO1088_015215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015215 CP040687.1 Protein Homology CDS 3160815 3161130 . - 0 ID=cds-QIE16364.1;Parent=gene-IXO1088_015215;Dbxref=NCBI_GP:QIE16364.1;Name=QIE16364.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_015215;product=IS5 family transposase;protein_id=QIE16364.1;transl_table=11 CP040687.1 Protein Homology CDS 3160367 3160815 . - 2 ID=cds-QIE16364.1;Parent=gene-IXO1088_015215;Dbxref=NCBI_GP:QIE16364.1;Name=QIE16364.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_015215;product=IS5 family transposase;protein_id=QIE16364.1;transl_table=11 CP040687.1 Genbank gene 3161183 3161902 . - . ID=gene-IXO1088_015220;Name=IXO1088_015220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015220 CP040687.1 Protein Homology CDS 3161183 3161902 . - 0 ID=cds-QIE16365.1;Parent=gene-IXO1088_015220;Dbxref=NCBI_GP:QIE16365.1;Name=QIE16365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259465.1;locus_tag=IXO1088_015220;product=MOSC domain-containing protein;protein_id=QIE16365.1;transl_table=11 CP040687.1 Genbank gene 3161899 3163101 . - . ID=gene-IXO1088_015225;Name=IXO1088_015225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015225 CP040687.1 Protein Homology CDS 3161899 3163101 . - 0 ID=cds-QIE16366.1;Parent=gene-IXO1088_015225;Dbxref=NCBI_GP:QIE16366.1;Name=QIE16366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259466.1;locus_tag=IXO1088_015225;product=PLP-dependent aminotransferase family protein;protein_id=QIE16366.1;transl_table=11 CP040687.1 Genbank gene 3163335 3163643 . - . ID=gene-IXO1088_015230;Name=IXO1088_015230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015230 CP040687.1 Protein Homology CDS 3163335 3163643 . - 0 ID=cds-QIE16367.1;Parent=gene-IXO1088_015230;Dbxref=NCBI_GP:QIE16367.1;Name=QIE16367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259467.1;locus_tag=IXO1088_015230;product=hypothetical protein;protein_id=QIE16367.1;transl_table=11 CP040687.1 Genbank gene 3163671 3163895 . - . ID=gene-IXO1088_015235;Name=IXO1088_015235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015235 CP040687.1 Protein Homology CDS 3163671 3163895 . - 0 ID=cds-QIE18019.1;Parent=gene-IXO1088_015235;Dbxref=NCBI_GP:QIE18019.1;Name=QIE18019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408863.1;locus_tag=IXO1088_015235;product=nuclear transport factor 2 family protein;protein_id=QIE18019.1;transl_table=11 CP040687.1 Genbank gene 3163955 3164209 . - . ID=gene-IXO1088_015240;Name=IXO1088_015240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015240 CP040687.1 Protein Homology CDS 3163955 3164209 . - 0 ID=cds-QIE16368.1;Parent=gene-IXO1088_015240;Dbxref=NCBI_GP:QIE16368.1;Name=QIE16368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051184.1;locus_tag=IXO1088_015240;product=hypothetical protein;protein_id=QIE16368.1;transl_table=11 CP040687.1 Genbank gene 3164211 3166070 . - . ID=gene-IXO1088_015245;Name=IXO1088_015245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015245 CP040687.1 Protein Homology CDS 3164211 3166070 . - 0 ID=cds-QIE16369.1;Parent=gene-IXO1088_015245;Dbxref=NCBI_GP:QIE16369.1;Name=QIE16369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637200.1;locus_tag=IXO1088_015245;product=ferrous iron transporter B;protein_id=QIE16369.1;transl_table=11 CP040687.1 Genbank gene 3166067 3166315 . - . ID=gene-IXO1088_015250;Name=IXO1088_015250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015250 CP040687.1 Protein Homology CDS 3166067 3166315 . - 0 ID=cds-QIE16370.1;Parent=gene-IXO1088_015250;Dbxref=NCBI_GP:QIE16370.1;Name=QIE16370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486267.1;locus_tag=IXO1088_015250;product=ferrous iron transport protein A;protein_id=QIE16370.1;transl_table=11 CP040687.1 Genbank gene 3166430 3167227 . + . ID=gene-IXO1088_015255;Name=IXO1088_015255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015255 CP040687.1 Protein Homology CDS 3166430 3167227 . + 0 ID=cds-QIE16371.1;Parent=gene-IXO1088_015255;Dbxref=NCBI_GP:QIE16371.1;Name=QIE16371.1;Note=Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503195.1;locus_tag=IXO1088_015255;product=enoyl-CoA hydratase/isomerase family protein;protein_id=QIE16371.1;transl_table=11 CP040687.1 Genbank gene 3167224 3167613 . + . ID=gene-IXO1088_015260;Name=IXO1088_015260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015260 CP040687.1 Protein Homology CDS 3167224 3167613 . + 0 ID=cds-QIE16372.1;Parent=gene-IXO1088_015260;Dbxref=NCBI_GP:QIE16372.1;Name=QIE16372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367129.1;locus_tag=IXO1088_015260;product=VOC family protein;protein_id=QIE16372.1;transl_table=11 CP040687.1 Genbank gene 3167684 3168580 . + . ID=gene-IXO1088_015265;Name=IXO1088_015265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015265 CP040687.1 Protein Homology CDS 3167684 3168580 . + 0 ID=cds-QIE16373.1;Parent=gene-IXO1088_015265;Dbxref=NCBI_GP:QIE16373.1;Name=QIE16373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503194.1;locus_tag=IXO1088_015265;product=hydroxymethylglutaryl-CoA lyase;protein_id=QIE16373.1;transl_table=11 CP040687.1 Genbank gene 3168719 3169489 . + . ID=gene-IXO1088_015270;Name=IXO1088_015270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015270 CP040687.1 Protein Homology CDS 3168719 3169489 . + 0 ID=cds-QIE16374.1;Parent=gene-IXO1088_015270;Dbxref=NCBI_GP:QIE16374.1;Name=QIE16374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637196.1;locus_tag=IXO1088_015270;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=QIE16374.1;transl_table=11 CP040687.1 Genbank gene 3169611 3170177 . + . ID=gene-IXO1088_015275;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=IXO1088_015275 CP040687.1 Protein Homology CDS 3169611 3170177 . + 0 ID=cds-QIE16375.1;Parent=gene-IXO1088_015275;Dbxref=NCBI_GP:QIE16375.1;Name=QIE16375.1;gbkey=CDS;gene=yeiP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009603592.1;locus_tag=IXO1088_015275;product=elongation factor P-like protein YeiP;protein_id=QIE16375.1;transl_table=11 CP040687.1 Genbank pseudogene 3170177 3170563 . + . ID=gene-IXO1088_015280;Name=IXO1088_015280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_015280;pseudo=true CP040687.1 Protein Homology CDS 3170177 3170563 . + 0 ID=cds-IXO1088_015280;Parent=gene-IXO1088_015280;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155301.1;locus_tag=IXO1088_015280;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3171070 3171522 . - . ID=gene-IXO1088_015285;Name=IXO1088_015285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015285 CP040687.1 Protein Homology CDS 3171070 3171522 . - 0 ID=cds-QIE16376.1;Parent=gene-IXO1088_015285;Dbxref=NCBI_GP:QIE16376.1;Name=QIE16376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259478.1;locus_tag=IXO1088_015285;product=hypothetical protein;protein_id=QIE16376.1;transl_table=11 CP040687.1 Genbank gene 3171504 3172478 . + . ID=gene-IXO1088_015290;Name=IXO1088_015290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015290 CP040687.1 Protein Homology CDS 3171504 3172478 . + 0 ID=cds-QIE16377.1;Parent=gene-IXO1088_015290;Dbxref=NCBI_GP:QIE16377.1;Name=QIE16377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444577.1;locus_tag=IXO1088_015290;product=IS30 family transposase;protein_id=QIE16377.1;transl_table=11 CP040687.1 Genbank gene 3172426 3173871 . - . ID=gene-IXO1088_015295;Name=IXO1088_015295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015295 CP040687.1 Protein Homology CDS 3172426 3173871 . - 0 ID=cds-QIE16378.1;Parent=gene-IXO1088_015295;Dbxref=NCBI_GP:QIE16378.1;Name=QIE16378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637126.1;locus_tag=IXO1088_015295;product=sugar porter family MFS transporter;protein_id=QIE16378.1;transl_table=11 CP040687.1 Genbank gene 3173938 3175275 . - . ID=gene-IXO1088_015300;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=IXO1088_015300 CP040687.1 Protein Homology CDS 3173938 3175275 . - 0 ID=cds-QIE16379.1;Parent=gene-IXO1088_015300;Dbxref=NCBI_GP:QIE16379.1;Name=QIE16379.1;gbkey=CDS;gene=xylA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639439.1;locus_tag=IXO1088_015300;product=xylose isomerase;protein_id=QIE16379.1;transl_table=11 CP040687.1 Genbank gene 3175323 3176816 . - . ID=gene-IXO1088_015305;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=IXO1088_015305 CP040687.1 Protein Homology CDS 3175323 3176816 . - 0 ID=cds-QIE16380.1;Parent=gene-IXO1088_015305;Dbxref=NCBI_GP:QIE16380.1;Name=QIE16380.1;gbkey=CDS;gene=xylB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010343898.1;locus_tag=IXO1088_015305;product=xylulokinase;protein_id=QIE16380.1;transl_table=11 CP040687.1 Genbank pseudogene 3176813 3177942 . - . ID=gene-IXO1088_015310;Name=IXO1088_015310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_015310;pseudo=true CP040687.1 Protein Homology CDS 3176813 3177942 . - 0 ID=cds-IXO1088_015310;Parent=gene-IXO1088_015310;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574429.1;locus_tag=IXO1088_015310;product=glycoside hydrolase family 95 protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3178034 3180937 . - . ID=gene-IXO1088_015315;Name=IXO1088_015315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015315 CP040687.1 Protein Homology CDS 3178034 3180937 . - 0 ID=cds-QIE16381.1;Parent=gene-IXO1088_015315;Dbxref=NCBI_GP:QIE16381.1;Name=QIE16381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637122.2;locus_tag=IXO1088_015315;product=DUF5110 domain-containing protein;protein_id=QIE16381.1;transl_table=11 CP040687.1 Genbank pseudogene 3181191 3181541 . + . ID=gene-IXO1088_015320;Name=IXO1088_015320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_015320;pseudo=true CP040687.1 Protein Homology CDS 3181191 3181541 . + 0 ID=cds-IXO1088_015320;Parent=gene-IXO1088_015320;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156675.1;locus_tag=IXO1088_015320;product=relaxation protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3181739 3182710 . - . ID=gene-IXO1088_015325;Name=IXO1088_015325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015325 CP040687.1 Protein Homology CDS 3181739 3182710 . - 0 ID=cds-QIE16382.1;Parent=gene-IXO1088_015325;Dbxref=NCBI_GP:QIE16382.1;Name=QIE16382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637115.1;locus_tag=IXO1088_015325;product=LysR family transcriptional regulator;protein_id=QIE16382.1;transl_table=11 CP040687.1 Genbank gene 3183123 3183755 . + . ID=gene-IXO1088_015330;Name=IXO1088_015330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015330 CP040687.1 Protein Homology CDS 3183123 3183755 . + 0 ID=cds-QIE16383.1;Parent=gene-IXO1088_015330;Dbxref=NCBI_GP:QIE16383.1;Name=QIE16383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637114.1;locus_tag=IXO1088_015330;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=QIE16383.1;transl_table=11 CP040687.1 Genbank gene 3183752 3184900 . + . ID=gene-IXO1088_015335;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=IXO1088_015335 CP040687.1 Protein Homology CDS 3183752 3184900 . + 0 ID=cds-QIE16384.1;Parent=gene-IXO1088_015335;Dbxref=NCBI_GP:QIE16384.1;Name=QIE16384.1;gbkey=CDS;gene=dgoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637113.1;locus_tag=IXO1088_015335;product=galactonate dehydratase;protein_id=QIE16384.1;transl_table=11 CP040687.1 Genbank gene 3184894 3185805 . + . ID=gene-IXO1088_015340;Name=IXO1088_015340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015340 CP040687.1 Protein Homology CDS 3184894 3185805 . + 0 ID=cds-QIE16385.1;Parent=gene-IXO1088_015340;Dbxref=NCBI_GP:QIE16385.1;Name=QIE16385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637112.2;locus_tag=IXO1088_015340;product=SMP-30/gluconolactonase/LRE family protein;protein_id=QIE16385.1;transl_table=11 CP040687.1 Genbank gene 3185802 3186680 . + . ID=gene-IXO1088_015345;Name=IXO1088_015345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015345 CP040687.1 Protein Homology CDS 3185802 3186680 . + 0 ID=cds-QIE16386.1;Parent=gene-IXO1088_015345;Dbxref=NCBI_GP:QIE16386.1;Name=QIE16386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637111.1;locus_tag=IXO1088_015345;product=2-dehydro-3-deoxygalactonokinase;protein_id=QIE16386.1;transl_table=11 CP040687.1 Genbank gene 3186763 3187086 . + . ID=gene-IXO1088_015350;Name=IXO1088_015350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015350 CP040687.1 Protein Homology CDS 3186763 3187086 . + 0 ID=cds-QIE16387.1;Parent=gene-IXO1088_015350;Dbxref=NCBI_GP:QIE16387.1;Name=QIE16387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994928.1;locus_tag=IXO1088_015350;product=ferredoxin family protein;protein_id=QIE16387.1;transl_table=11 CP040687.1 Genbank gene 3187211 3187729 . - . ID=gene-IXO1088_015355;Name=IXO1088_015355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015355 CP040687.1 Protein Homology CDS 3187211 3187729 . - 0 ID=cds-QIE16388.1;Parent=gene-IXO1088_015355;Dbxref=NCBI_GP:QIE16388.1;Name=QIE16388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637109.1;locus_tag=IXO1088_015355;product=hypothetical protein;protein_id=QIE16388.1;transl_table=11 CP040687.1 Genbank gene 3187746 3188654 . - . ID=gene-IXO1088_015360;Name=IXO1088_015360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015360 CP040687.1 Protein Homology CDS 3187746 3188654 . - 0 ID=cds-QIE16389.1;Parent=gene-IXO1088_015360;Dbxref=NCBI_GP:QIE16389.1;Name=QIE16389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637108.1;locus_tag=IXO1088_015360;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=QIE16389.1;transl_table=11 CP040687.1 Genbank gene 3188748 3189374 . + . ID=gene-IXO1088_015365;Name=IXO1088_015365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015365 CP040687.1 Protein Homology CDS 3188748 3189374 . + 0 ID=cds-QIE16390.1;Parent=gene-IXO1088_015365;Dbxref=NCBI_GP:QIE16390.1;Name=QIE16390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637107.1;locus_tag=IXO1088_015365;product=glycine cleavage system protein R;protein_id=QIE16390.1;transl_table=11 CP040687.1 Genbank gene 3189398 3189736 . + . ID=gene-IXO1088_015370;Name=IXO1088_015370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015370 CP040687.1 Protein Homology CDS 3189398 3189736 . + 0 ID=cds-QIE18020.1;Parent=gene-IXO1088_015370;Dbxref=NCBI_GP:QIE18020.1;Name=QIE18020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637106.1;locus_tag=IXO1088_015370;product=ribonuclease E inhibitor RraB;protein_id=QIE18020.1;transl_table=11 CP040687.1 Genbank gene 3189774 3190256 . + . ID=gene-IXO1088_015375;Name=IXO1088_015375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015375 CP040687.1 Protein Homology CDS 3189774 3190256 . + 0 ID=cds-QIE16391.1;Parent=gene-IXO1088_015375;Dbxref=NCBI_GP:QIE16391.1;Name=QIE16391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637105.1;locus_tag=IXO1088_015375;product=peroxiredoxin;protein_id=QIE16391.1;transl_table=11 CP040687.1 Genbank gene 3190339 3191736 . + . ID=gene-IXO1088_015380;Name=IXO1088_015380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015380 CP040687.1 Protein Homology CDS 3190339 3191736 . + 0 ID=cds-QIE16392.1;Parent=gene-IXO1088_015380;Dbxref=NCBI_GP:QIE16392.1;Name=QIE16392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637104.2;locus_tag=IXO1088_015380;product=PhoH family protein;protein_id=QIE16392.1;transl_table=11 CP040687.1 Genbank gene 3191736 3192218 . + . ID=gene-IXO1088_015385;Name=IXO1088_015385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015385 CP040687.1 Protein Homology CDS 3191736 3192218 . + 0 ID=cds-QIE16393.1;Parent=gene-IXO1088_015385;Dbxref=NCBI_GP:QIE16393.1;Name=QIE16393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503108.1;locus_tag=IXO1088_015385;product=hypothetical protein;protein_id=QIE16393.1;transl_table=11 CP040687.1 Genbank gene 3192288 3193112 . + . ID=gene-IXO1088_015390;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=IXO1088_015390 CP040687.1 Protein Homology CDS 3192288 3193112 . + 0 ID=cds-QIE16394.1;Parent=gene-IXO1088_015390;Dbxref=NCBI_GP:QIE16394.1;Name=QIE16394.1;gbkey=CDS;gene=thiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112598.1;locus_tag=IXO1088_015390;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=QIE16394.1;transl_table=11 CP040687.1 Genbank gene 3193220 3193417 . + . ID=gene-IXO1088_015395;Name=IXO1088_015395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015395 CP040687.1 GeneMarkS-2+ CDS 3193220 3193417 . + 0 ID=cds-QIE16395.1;Parent=gene-IXO1088_015395;Dbxref=NCBI_GP:QIE16395.1;Name=QIE16395.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_015395;product=hypothetical protein;protein_id=QIE16395.1;transl_table=11 CP040687.1 Genbank gene 3193553 3193972 . + . ID=gene-IXO1088_015400;Name=IXO1088_015400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015400 CP040687.1 Protein Homology CDS 3193553 3193972 . + 0 ID=cds-QIE16396.1;Parent=gene-IXO1088_015400;Dbxref=NCBI_GP:QIE16396.1;Name=QIE16396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408880.1;locus_tag=IXO1088_015400;product=hypothetical protein;protein_id=QIE16396.1;transl_table=11 CP040687.1 Genbank gene 3194013 3194089 . + . ID=gene-IXO1088_015405;Name=IXO1088_015405;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_015405 CP040687.1 tRNAscan-SE tRNA 3194013 3194089 . + . ID=rna-IXO1088_015405;Parent=gene-IXO1088_015405;anticodon=(pos:3194047..3194049);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_015405;product=tRNA-Arg CP040687.1 tRNAscan-SE exon 3194013 3194089 . + . ID=exon-IXO1088_015405-1;Parent=rna-IXO1088_015405;anticodon=(pos:3194047..3194049);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_015405;product=tRNA-Arg CP040687.1 Genbank gene 3194183 3194259 . + . ID=gene-IXO1088_015410;Name=IXO1088_015410;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_015410 CP040687.1 tRNAscan-SE tRNA 3194183 3194259 . + . ID=rna-IXO1088_015410;Parent=gene-IXO1088_015410;anticodon=(pos:3194217..3194219);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_015410;product=tRNA-Arg CP040687.1 tRNAscan-SE exon 3194183 3194259 . + . ID=exon-IXO1088_015410-1;Parent=rna-IXO1088_015410;anticodon=(pos:3194217..3194219);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_015410;product=tRNA-Arg CP040687.1 Genbank gene 3194427 3195413 . - . ID=gene-IXO1088_015415;Name=IXO1088_015415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015415 CP040687.1 Protein Homology CDS 3194427 3195413 . - 0 ID=cds-QIE16397.1;Parent=gene-IXO1088_015415;Dbxref=NCBI_GP:QIE16397.1;Name=QIE16397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155120.1;locus_tag=IXO1088_015415;product=hypothetical protein;protein_id=QIE16397.1;transl_table=11 CP040687.1 Genbank gene 3195458 3196402 . - . ID=gene-IXO1088_015420;Name=IXO1088_015420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015420 CP040687.1 Protein Homology CDS 3195458 3196402 . - 0 ID=cds-QIE16398.1;Parent=gene-IXO1088_015420;Dbxref=NCBI_GP:QIE16398.1;Name=QIE16398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503104.1;locus_tag=IXO1088_015420;product=LysR family transcriptional regulator;protein_id=QIE16398.1;transl_table=11 CP040687.1 Genbank gene 3196539 3197240 . + . ID=gene-IXO1088_015425;Name=IXO1088_015425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015425 CP040687.1 Protein Homology CDS 3196539 3197240 . + 0 ID=cds-QIE16399.1;Parent=gene-IXO1088_015425;Dbxref=NCBI_GP:QIE16399.1;Name=QIE16399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637097.1;locus_tag=IXO1088_015425;product=pirin family protein;protein_id=QIE16399.1;transl_table=11 CP040687.1 Genbank pseudogene 3197452 3197664 . - . ID=gene-IXO1088_015430;Name=IXO1088_015430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_015430;pseudo=true CP040687.1 Protein Homology CDS 3197452 3197664 . - 0 ID=cds-IXO1088_015430;Parent=gene-IXO1088_015430;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300760.1;locus_tag=IXO1088_015430;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3197568 3197867 . - . ID=gene-IXO1088_015435;Name=IXO1088_015435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015435 CP040687.1 Protein Homology CDS 3197568 3197867 . - 0 ID=cds-QIE16400.1;Parent=gene-IXO1088_015435;Dbxref=NCBI_GP:QIE16400.1;Name=QIE16400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444563.1;locus_tag=IXO1088_015435;product=endolysin;protein_id=QIE16400.1;transl_table=11 CP040687.1 Genbank gene 3197921 3198719 . - . ID=gene-IXO1088_015440;Name=IXO1088_015440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015440 CP040687.1 Protein Homology CDS 3198448 3198719 . - 0 ID=cds-QIE16401.1;Parent=gene-IXO1088_015440;Dbxref=NCBI_GP:QIE16401.1;Name=QIE16401.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_015440;product=IS5 family transposase;protein_id=QIE16401.1;transl_table=11 CP040687.1 Protein Homology CDS 3197921 3198449 . - 1 ID=cds-QIE16401.1;Parent=gene-IXO1088_015440;Dbxref=NCBI_GP:QIE16401.1;Name=QIE16401.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_015440;product=IS5 family transposase;protein_id=QIE16401.1;transl_table=11 CP040687.1 Genbank pseudogene 3198765 3198992 . - . ID=gene-IXO1088_015445;Name=IXO1088_015445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_015445;pseudo=true CP040687.1 Protein Homology CDS 3198765 3198992 . - 0 ID=cds-IXO1088_015445;Parent=gene-IXO1088_015445;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503645.1;locus_tag=IXO1088_015445;product=lysozyme;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3199236 3199985 . - . ID=gene-IXO1088_015450;Name=IXO1088_015450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015450 CP040687.1 Protein Homology CDS 3199236 3199985 . - 0 ID=cds-QIE16402.1;Parent=gene-IXO1088_015450;Dbxref=NCBI_GP:QIE16402.1;Name=QIE16402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259505.1;locus_tag=IXO1088_015450;product=isopentenyl transferase;protein_id=QIE16402.1;transl_table=11 CP040687.1 Genbank gene 3199990 3200685 . - . ID=gene-IXO1088_015455;Name=IXO1088_015455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015455 CP040687.1 Protein Homology CDS 3199990 3200685 . - 0 ID=cds-QIE16403.1;Parent=gene-IXO1088_015455;Dbxref=NCBI_GP:QIE16403.1;Name=QIE16403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408881.1;locus_tag=IXO1088_015455;product=DNA helicase;protein_id=QIE16403.1;transl_table=11 CP040687.1 Genbank gene 3200871 3201170 . - . ID=gene-IXO1088_015460;Name=IXO1088_015460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015460 CP040687.1 Protein Homology CDS 3200871 3201170 . - 0 ID=cds-QIE18021.1;Parent=gene-IXO1088_015460;Dbxref=NCBI_GP:QIE18021.1;Name=QIE18021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300766.1;locus_tag=IXO1088_015460;product=hypothetical protein;protein_id=QIE18021.1;transl_table=11 CP040687.1 Genbank gene 3201558 3202085 . - . ID=gene-IXO1088_015465;Name=IXO1088_015465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015465 CP040687.1 Protein Homology CDS 3201558 3202085 . - 0 ID=cds-QIE16404.1;Parent=gene-IXO1088_015465;Dbxref=NCBI_GP:QIE16404.1;Name=QIE16404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259506.1;locus_tag=IXO1088_015465;product=helix-turn-helix domain-containing protein;protein_id=QIE16404.1;transl_table=11 CP040687.1 Genbank gene 3202508 3202600 . - . ID=gene-IXO1088_015470;Name=IXO1088_015470;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_015470 CP040687.1 tRNAscan-SE tRNA 3202508 3202600 . - . ID=rna-IXO1088_015470;Parent=gene-IXO1088_015470;anticodon=(pos:complement(3202564..3202566));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_015470;product=tRNA-Ser CP040687.1 tRNAscan-SE exon 3202508 3202600 . - . ID=exon-IXO1088_015470-1;Parent=rna-IXO1088_015470;anticodon=(pos:complement(3202564..3202566));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_015470;product=tRNA-Ser CP040687.1 Genbank gene 3202688 3202900 . - . ID=gene-IXO1088_015475;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=IXO1088_015475 CP040687.1 Protein Homology CDS 3202688 3202900 . - 0 ID=cds-QIE16405.1;Parent=gene-IXO1088_015475;Dbxref=NCBI_GP:QIE16405.1;Name=QIE16405.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637095.1;locus_tag=IXO1088_015475;product=carbon storage regulator CsrA;protein_id=QIE16405.1;transl_table=11 CP040687.1 Genbank gene 3203040 3205688 . - . ID=gene-IXO1088_015480;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=IXO1088_015480 CP040687.1 Protein Homology CDS 3203040 3205688 . - 0 ID=cds-QIE16406.1;Parent=gene-IXO1088_015480;Dbxref=NCBI_GP:QIE16406.1;Name=QIE16406.1;gbkey=CDS;gene=alaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637094.1;locus_tag=IXO1088_015480;product=alanine--tRNA ligase;protein_id=QIE16406.1;transl_table=11 CP040687.1 Genbank gene 3205790 3206278 . - . ID=gene-IXO1088_015485;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=IXO1088_015485 CP040687.1 Protein Homology CDS 3205790 3206278 . - 0 ID=cds-QIE16407.1;Parent=gene-IXO1088_015485;Dbxref=NCBI_GP:QIE16407.1;Name=QIE16407.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637093.1;locus_tag=IXO1088_015485;product=recombination regulator RecX;protein_id=QIE16407.1;transl_table=11 CP040687.1 Genbank gene 3206581 3207615 . - . ID=gene-IXO1088_015490;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=IXO1088_015490 CP040687.1 Protein Homology CDS 3206581 3207615 . - 0 ID=cds-QIE16408.1;Parent=gene-IXO1088_015490;Dbxref=NCBI_GP:QIE16408.1;Name=QIE16408.1;gbkey=CDS;gene=recA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051113.1;locus_tag=IXO1088_015490;product=recombinase RecA;protein_id=QIE16408.1;transl_table=11 CP040687.1 Genbank gene 3207788 3208429 . - . ID=gene-IXO1088_015495;Name=IXO1088_015495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015495 CP040687.1 Protein Homology CDS 3207788 3208429 . - 0 ID=cds-QIE18022.1;Parent=gene-IXO1088_015495;Dbxref=NCBI_GP:QIE18022.1;Name=QIE18022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637091.1;locus_tag=IXO1088_015495;product=LexA repressor 2;protein_id=QIE18022.1;transl_table=11 CP040687.1 Genbank gene 3208518 3210194 . - . ID=gene-IXO1088_015500;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=IXO1088_015500 CP040687.1 Protein Homology CDS 3208518 3210194 . - 0 ID=cds-QIE18023.1;Parent=gene-IXO1088_015500;Dbxref=NCBI_GP:QIE18023.1;Name=QIE18023.1;gbkey=CDS;gene=ubiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637090.1;locus_tag=IXO1088_015500;product=2-polyprenylphenol 6-hydroxylase;protein_id=QIE18023.1;transl_table=11 CP040687.1 Genbank gene 3210672 3211160 . - . ID=gene-IXO1088_015505;Name=IXO1088_015505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015505 CP040687.1 Protein Homology CDS 3210672 3211160 . - 0 ID=cds-QIE18024.1;Parent=gene-IXO1088_015505;Dbxref=NCBI_GP:QIE18024.1;Name=QIE18024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637088.1;locus_tag=IXO1088_015505;product=CinA family protein;protein_id=QIE18024.1;transl_table=11 CP040687.1 Genbank gene 3211598 3212917 . - . ID=gene-IXO1088_015510;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=IXO1088_015510 CP040687.1 Protein Homology CDS 3211598 3212917 . - 0 ID=cds-QIE16409.1;Parent=gene-IXO1088_015510;Dbxref=NCBI_GP:QIE16409.1;Name=QIE16409.1;gbkey=CDS;gene=hflX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503654.1;locus_tag=IXO1088_015510;product=GTPase HflX;protein_id=QIE16409.1;transl_table=11 CP040687.1 Genbank gene 3212929 3213207 . - . ID=gene-IXO1088_015515;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=IXO1088_015515 CP040687.1 Protein Homology CDS 3212929 3213207 . - 0 ID=cds-QIE18025.1;Parent=gene-IXO1088_015515;Dbxref=NCBI_GP:QIE18025.1;Name=QIE18025.1;gbkey=CDS;gene=hfq;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637086.1;locus_tag=IXO1088_015515;product=RNA chaperone Hfq;protein_id=QIE18025.1;transl_table=11 CP040687.1 Genbank gene 3213285 3214268 . - . ID=gene-IXO1088_015520;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=IXO1088_015520 CP040687.1 Protein Homology CDS 3213285 3214268 . - 0 ID=cds-QIE16410.1;Parent=gene-IXO1088_015520;Dbxref=NCBI_GP:QIE16410.1;Name=QIE16410.1;gbkey=CDS;gene=miaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637085.1;locus_tag=IXO1088_015520;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=QIE16410.1;transl_table=11 CP040687.1 Genbank gene 3214268 3215170 . - . ID=gene-IXO1088_015525;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=IXO1088_015525 CP040687.1 Protein Homology CDS 3214268 3215170 . - 0 ID=cds-QIE16411.1;Parent=gene-IXO1088_015525;Dbxref=NCBI_GP:QIE16411.1;Name=QIE16411.1;gbkey=CDS;gene=folP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006453304.1;locus_tag=IXO1088_015525;product=dihydropteroate synthase;protein_id=QIE16411.1;transl_table=11 CP040687.1 Genbank gene 3215290 3217236 . - . ID=gene-IXO1088_015530;Name=IXO1088_015530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015530 CP040687.1 Protein Homology CDS 3215290 3217236 . - 0 ID=cds-QIE16412.1;Parent=gene-IXO1088_015530;Dbxref=NCBI_GP:QIE16412.1;Name=QIE16412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637083.1;locus_tag=IXO1088_015530;product=ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein;protein_id=QIE16412.1;transl_table=11 CP040687.1 Genbank gene 3217292 3217924 . - . ID=gene-IXO1088_015535;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=IXO1088_015535 CP040687.1 Protein Homology CDS 3217292 3217924 . - 0 ID=cds-QIE16413.1;Parent=gene-IXO1088_015535;Dbxref=NCBI_GP:QIE16413.1;Name=QIE16413.1;gbkey=CDS;gene=rlmE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924322.1;locus_tag=IXO1088_015535;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=QIE16413.1;transl_table=11 CP040687.1 Genbank gene 3217991 3218296 . + . ID=gene-IXO1088_015540;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=IXO1088_015540 CP040687.1 Protein Homology CDS 3217991 3218296 . + 0 ID=cds-QIE16414.1;Parent=gene-IXO1088_015540;Dbxref=NCBI_GP:QIE16414.1;Name=QIE16414.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637081.1;locus_tag=IXO1088_015540;product=ribosome assembly RNA-binding protein YhbY;protein_id=QIE16414.1;transl_table=11 CP040687.1 Genbank gene 3218312 3218686 . + . ID=gene-IXO1088_015545;Name=IXO1088_015545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015545 CP040687.1 Protein Homology CDS 3218312 3218686 . + 0 ID=cds-QIE16415.1;Parent=gene-IXO1088_015545;Dbxref=NCBI_GP:QIE16415.1;Name=QIE16415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637080.1;locus_tag=IXO1088_015545;product=hypothetical protein;protein_id=QIE16415.1;transl_table=11 CP040687.1 Genbank gene 3218879 3219670 . - . ID=gene-IXO1088_015550;Name=IXO1088_015550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015550 CP040687.1 Protein Homology CDS 3218879 3219670 . - 0 ID=cds-QIE16416.1;Parent=gene-IXO1088_015550;Dbxref=NCBI_GP:QIE16416.1;Name=QIE16416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637079.1;locus_tag=IXO1088_015550;product=LysM peptidoglycan-binding domain-containing protein;protein_id=QIE16416.1;transl_table=11 CP040687.1 Genbank gene 3219649 3220263 . - . ID=gene-IXO1088_015555;Name=IXO1088_015555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015555 CP040687.1 Protein Homology CDS 3219649 3220263 . - 0 ID=cds-QIE16417.1;Parent=gene-IXO1088_015555;Dbxref=NCBI_GP:QIE16417.1;Name=QIE16417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637078.1;locus_tag=IXO1088_015555;product=DedA family protein;protein_id=QIE16417.1;transl_table=11 CP040687.1 Genbank gene 3220282 3220959 . - . ID=gene-IXO1088_015560;Name=IXO1088_015560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015560 CP040687.1 Protein Homology CDS 3220282 3220959 . - 0 ID=cds-QIE16418.1;Parent=gene-IXO1088_015560;Dbxref=NCBI_GP:QIE16418.1;Name=QIE16418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637077.1;locus_tag=IXO1088_015560;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=QIE16418.1;transl_table=11 CP040687.1 Genbank gene 3220956 3221735 . - . ID=gene-IXO1088_015565;Name=IXO1088_015565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015565 CP040687.1 Protein Homology CDS 3220956 3221735 . - 0 ID=cds-QIE16419.1;Parent=gene-IXO1088_015565;Dbxref=NCBI_GP:QIE16419.1;Name=QIE16419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637076.1;locus_tag=IXO1088_015565;product=5'-nucleotidase SurE;protein_id=QIE16419.1;transl_table=11 CP040687.1 Genbank gene 3221829 3222374 . + . ID=gene-IXO1088_015570;Name=IXO1088_015570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015570 CP040687.1 Protein Homology CDS 3221829 3222374 . + 0 ID=cds-QIE16420.1;Parent=gene-IXO1088_015570;Dbxref=NCBI_GP:QIE16420.1;Name=QIE16420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637075.1;locus_tag=IXO1088_015570;product=SMR domain protein;protein_id=QIE16420.1;transl_table=11 CP040687.1 Genbank gene 3222691 3223800 . - . ID=gene-IXO1088_015575;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=IXO1088_015575 CP040687.1 Protein Homology CDS 3222691 3223800 . - 0 ID=cds-QIE16421.1;Parent=gene-IXO1088_015575;Dbxref=NCBI_GP:QIE16421.1;Name=QIE16421.1;gbkey=CDS;gene=truD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503666.1;locus_tag=IXO1088_015575;product=tRNA pseudouridine(13) synthase TruD;protein_id=QIE16421.1;transl_table=11 CP040687.1 Genbank gene 3223921 3224412 . - . ID=gene-IXO1088_015580;Name=IXO1088_015580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015580 CP040687.1 Protein Homology CDS 3223921 3224412 . - 0 ID=cds-QIE16422.1;Parent=gene-IXO1088_015580;Dbxref=NCBI_GP:QIE16422.1;Name=QIE16422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637073.1;locus_tag=IXO1088_015580;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=QIE16422.1;transl_table=11 CP040687.1 Genbank gene 3224435 3224508 . - . ID=gene-IXO1088_015585;Name=IXO1088_015585;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_015585 CP040687.1 cmsearch ncRNA 3224435 3224508 . - . ID=rna-IXO1088_015585;Parent=gene-IXO1088_015585;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_015585;product=sX9 sRNA CP040687.1 cmsearch exon 3224435 3224508 . - . ID=exon-IXO1088_015585-1;Parent=rna-IXO1088_015585;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_015585;product=sX9 sRNA CP040687.1 Genbank gene 3224568 3225386 . - . ID=gene-IXO1088_015590;Name=IXO1088_015590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015590 CP040687.1 Protein Homology CDS 3224568 3225386 . - 0 ID=cds-QIE16423.1;Parent=gene-IXO1088_015590;Dbxref=NCBI_GP:QIE16423.1;Name=QIE16423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503668.1;locus_tag=IXO1088_015590;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=QIE16423.1;transl_table=11 CP040687.1 Genbank gene 3225383 3225748 . - . ID=gene-IXO1088_015595;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=IXO1088_015595 CP040687.1 Protein Homology CDS 3225383 3225748 . - 0 ID=cds-QIE16424.1;Parent=gene-IXO1088_015595;Dbxref=NCBI_GP:QIE16424.1;Name=QIE16424.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637071.1;locus_tag=IXO1088_015595;product=cell division protein FtsB;protein_id=QIE16424.1;transl_table=11 CP040687.1 Genbank gene 3225752 3227044 . - . ID=gene-IXO1088_015600;Name=IXO1088_015600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015600 CP040687.1 Protein Homology CDS 3225752 3227044 . - 0 ID=cds-QIE16425.1;Parent=gene-IXO1088_015600;Dbxref=NCBI_GP:QIE16425.1;Name=QIE16425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637070.1;locus_tag=IXO1088_015600;product=phosphopyruvate hydratase;protein_id=QIE16425.1;transl_table=11 CP040687.1 Genbank gene 3227169 3227411 . - . ID=gene-IXO1088_015605;Name=IXO1088_015605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015605 CP040687.1 Protein Homology CDS 3227169 3227411 . - 0 ID=cds-QIE18026.1;Parent=gene-IXO1088_015605;Dbxref=NCBI_GP:QIE18026.1;Name=QIE18026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169875.1;locus_tag=IXO1088_015605;product=hypothetical protein;protein_id=QIE18026.1;transl_table=11 CP040687.1 Genbank gene 3227528 3228358 . - . ID=gene-IXO1088_015610;Name=IXO1088_015610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015610 CP040687.1 Protein Homology CDS 3227528 3228358 . - 0 ID=cds-QIE16426.1;Parent=gene-IXO1088_015610;Dbxref=NCBI_GP:QIE16426.1;Name=QIE16426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637068.1;locus_tag=IXO1088_015610;product=3-deoxy-8-phosphooctulonate synthase;protein_id=QIE16426.1;transl_table=11 CP040687.1 Genbank gene 3228562 3230226 . - . ID=gene-IXO1088_015615;Name=IXO1088_015615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015615 CP040687.1 Protein Homology CDS 3228562 3230226 . - 0 ID=cds-QIE16427.1;Parent=gene-IXO1088_015615;Dbxref=NCBI_GP:QIE16427.1;Name=QIE16427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637067.2;locus_tag=IXO1088_015615;product=CTP synthase;protein_id=QIE16427.1;transl_table=11 CP040687.1 Genbank gene 3230401 3230643 . - . ID=gene-IXO1088_015620;Name=IXO1088_015620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015620 CP040687.1 Protein Homology CDS 3230401 3230643 . - 0 ID=cds-QIE16428.1;Parent=gene-IXO1088_015620;Dbxref=NCBI_GP:QIE16428.1;Name=QIE16428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481819.1;locus_tag=IXO1088_015620;product=hypothetical protein;protein_id=QIE16428.1;transl_table=11 CP040687.1 Genbank gene 3230808 3232697 . + . ID=gene-IXO1088_015625;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=IXO1088_015625 CP040687.1 Protein Homology CDS 3230808 3232697 . + 0 ID=cds-QIE16429.1;Parent=gene-IXO1088_015625;Dbxref=NCBI_GP:QIE16429.1;Name=QIE16429.1;gbkey=CDS;gene=parE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237730.1;locus_tag=IXO1088_015625;product=DNA topoisomerase IV subunit B;protein_id=QIE16429.1;transl_table=11 CP040687.1 Genbank gene 3232716 3233514 . - . ID=gene-IXO1088_015630;Name=IXO1088_015630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015630 CP040687.1 Protein Homology CDS 3233243 3233514 . - 0 ID=cds-QIE16430.1;Parent=gene-IXO1088_015630;Dbxref=NCBI_GP:QIE16430.1;Name=QIE16430.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_015630;product=IS5 family transposase;protein_id=QIE16430.1;transl_table=11 CP040687.1 Protein Homology CDS 3232716 3233244 . - 1 ID=cds-QIE16430.1;Parent=gene-IXO1088_015630;Dbxref=NCBI_GP:QIE16430.1;Name=QIE16430.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_015630;product=IS5 family transposase;protein_id=QIE16430.1;transl_table=11 CP040687.1 Genbank gene 3233929 3235437 . + . ID=gene-IXO1088_015635;Name=IXO1088_015635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015635 CP040687.1 Protein Homology CDS 3233929 3235437 . + 0 ID=cds-QIE16431.1;Parent=gene-IXO1088_015635;Dbxref=NCBI_GP:QIE16431.1;Name=QIE16431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166236.1;locus_tag=IXO1088_015635;product=S10 family peptidase;protein_id=QIE16431.1;transl_table=11 CP040687.1 Genbank gene 3235495 3236256 . - . ID=gene-IXO1088_015640;Name=IXO1088_015640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015640 CP040687.1 Protein Homology CDS 3235495 3236256 . - 0 ID=cds-QIE16432.1;Parent=gene-IXO1088_015640;Dbxref=NCBI_GP:QIE16432.1;Name=QIE16432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637062.1;locus_tag=IXO1088_015640;product=YdcF family protein;protein_id=QIE16432.1;transl_table=11 CP040687.1 Genbank gene 3236333 3237460 . - . ID=gene-IXO1088_015645;Name=IXO1088_015645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015645 CP040687.1 Protein Homology CDS 3236333 3237460 . - 0 ID=cds-QIE16433.1;Parent=gene-IXO1088_015645;Dbxref=NCBI_GP:QIE16433.1;Name=QIE16433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637061.1;locus_tag=IXO1088_015645;product=inorganic phosphate transporter;protein_id=QIE16433.1;transl_table=11 CP040687.1 Genbank gene 3237470 3238096 . - . ID=gene-IXO1088_015650;Name=IXO1088_015650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015650 CP040687.1 Protein Homology CDS 3237470 3238096 . - 0 ID=cds-QIE16434.1;Parent=gene-IXO1088_015650;Dbxref=NCBI_GP:QIE16434.1;Name=QIE16434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005992439.1;locus_tag=IXO1088_015650;product=DUF47 family protein;protein_id=QIE16434.1;transl_table=11 CP040687.1 Genbank pseudogene 3238158 3238376 . + . ID=gene-IXO1088_015655;Name=IXO1088_015655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_015655;pseudo=true CP040687.1 Protein Homology CDS 3238158 3238376 . + 0 ID=cds-IXO1088_015655;Parent=gene-IXO1088_015655;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914986.1;locus_tag=IXO1088_015655;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3238369 3239709 . + . ID=gene-IXO1088_015660;Name=IXO1088_015660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015660 CP040687.1 Protein Homology CDS 3238369 3239709 . + 0 ID=cds-QIE16435.1;Parent=gene-IXO1088_015660;Dbxref=NCBI_GP:QIE16435.1;Name=QIE16435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637059.1;locus_tag=IXO1088_015660;product=HlyC/CorC family transporter;protein_id=QIE16435.1;transl_table=11 CP040687.1 Genbank gene 3239744 3240361 . + . ID=gene-IXO1088_015665;Name=IXO1088_015665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015665 CP040687.1 Protein Homology CDS 3239744 3240361 . + 0 ID=cds-QIE18027.1;Parent=gene-IXO1088_015665;Dbxref=NCBI_GP:QIE18027.1;Name=QIE18027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637058.1;locus_tag=IXO1088_015665;product=exopolysaccharide biosynthesis protein;protein_id=QIE18027.1;transl_table=11 CP040687.1 Genbank gene 3240393 3240893 . - . ID=gene-IXO1088_015670;Name=IXO1088_015670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015670 CP040687.1 Protein Homology CDS 3240393 3240893 . - 0 ID=cds-QIE16436.1;Parent=gene-IXO1088_015670;Dbxref=NCBI_GP:QIE16436.1;Name=QIE16436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637057.1;locus_tag=IXO1088_015670;product=general stress protein;protein_id=QIE16436.1;transl_table=11 CP040687.1 Genbank gene 3240954 3241955 . - . ID=gene-IXO1088_015675;Name=IXO1088_015675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015675 CP040687.1 Protein Homology CDS 3240954 3241955 . - 0 ID=cds-QIE16437.1;Parent=gene-IXO1088_015675;Dbxref=NCBI_GP:QIE16437.1;Name=QIE16437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155084.1;locus_tag=IXO1088_015675;product=LLM class flavin-dependent oxidoreductase;protein_id=QIE16437.1;transl_table=11 CP040687.1 Genbank gene 3241977 3242210 . + . ID=gene-IXO1088_015680;Name=IXO1088_015680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015680 CP040687.1 Protein Homology CDS 3241977 3242210 . + 0 ID=cds-QIE18028.1;Parent=gene-IXO1088_015680;Dbxref=NCBI_GP:QIE18028.1;Name=QIE18028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503686.1;locus_tag=IXO1088_015680;product=hypothetical protein;protein_id=QIE18028.1;transl_table=11 CP040687.1 Genbank gene 3242271 3242347 . + . ID=gene-IXO1088_015685;Name=IXO1088_015685;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_015685 CP040687.1 cmsearch ncRNA 3242271 3242347 . + . ID=rna-IXO1088_015685;Parent=gene-IXO1088_015685;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_015685;product=sX9 sRNA CP040687.1 cmsearch exon 3242271 3242347 . + . ID=exon-IXO1088_015685-1;Parent=rna-IXO1088_015685;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_015685;product=sX9 sRNA CP040687.1 Genbank gene 3242421 3242729 . + . ID=gene-IXO1088_015690;Name=IXO1088_015690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015690 CP040687.1 Protein Homology CDS 3242421 3242729 . + 0 ID=cds-QIE16438.1;Parent=gene-IXO1088_015690;Dbxref=NCBI_GP:QIE16438.1;Name=QIE16438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349047.1;locus_tag=IXO1088_015690;product=hypothetical protein;protein_id=QIE16438.1;transl_table=11 CP040687.1 Genbank gene 3242760 3244175 . + . ID=gene-IXO1088_015695;Name=IXO1088_015695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015695 CP040687.1 Protein Homology CDS 3242760 3244175 . + 0 ID=cds-QIE16439.1;Parent=gene-IXO1088_015695;Dbxref=NCBI_GP:QIE16439.1;Name=QIE16439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503687.1;locus_tag=IXO1088_015695;product=MFS transporter;protein_id=QIE16439.1;transl_table=11 CP040687.1 Genbank gene 3244292 3244368 . - . ID=gene-IXO1088_015700;Name=IXO1088_015700;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_015700 CP040687.1 cmsearch ncRNA 3244292 3244368 . - . ID=rna-IXO1088_015700;Parent=gene-IXO1088_015700;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_015700;product=sX9 sRNA CP040687.1 cmsearch exon 3244292 3244368 . - . ID=exon-IXO1088_015700-1;Parent=rna-IXO1088_015700;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_015700;product=sX9 sRNA CP040687.1 Genbank gene 3244483 3246204 . - . ID=gene-IXO1088_015705;Name=IXO1088_015705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015705 CP040687.1 Protein Homology CDS 3244483 3246204 . - 0 ID=cds-QIE16440.1;Parent=gene-IXO1088_015705;Dbxref=NCBI_GP:QIE16440.1;Name=QIE16440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117562.1;locus_tag=IXO1088_015705;product=ABC transporter ATP-binding protein;protein_id=QIE16440.1;transl_table=11 CP040687.1 Genbank gene 3246298 3247356 . - . ID=gene-IXO1088_015710;Name=IXO1088_015710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015710 CP040687.1 Protein Homology CDS 3246298 3247356 . - 0 ID=cds-QIE16441.1;Parent=gene-IXO1088_015710;Dbxref=NCBI_GP:QIE16441.1;Name=QIE16441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408904.1;locus_tag=IXO1088_015710;product=serine kinase;protein_id=QIE16441.1;transl_table=11 CP040687.1 Genbank gene 3247489 3249009 . + . ID=gene-IXO1088_015715;Name=IXO1088_015715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015715 CP040687.1 Protein Homology CDS 3247489 3249009 . + 0 ID=cds-QIE16442.1;Parent=gene-IXO1088_015715;Dbxref=NCBI_GP:QIE16442.1;Name=QIE16442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851562.1;locus_tag=IXO1088_015715;product=B12-binding domain-containing radical SAM protein;protein_id=QIE16442.1;transl_table=11 CP040687.1 Genbank gene 3249099 3250313 . + . ID=gene-IXO1088_015720;Name=IXO1088_015720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015720 CP040687.1 Protein Homology CDS 3249099 3250313 . + 0 ID=cds-QIE16443.1;Parent=gene-IXO1088_015720;Dbxref=NCBI_GP:QIE16443.1;Name=QIE16443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304796.1;locus_tag=IXO1088_015720;product=nucleotidyltransferase family protein;protein_id=QIE16443.1;transl_table=11 CP040687.1 Genbank gene 3250417 3251529 . - . ID=gene-IXO1088_015725;Name=IXO1088_015725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015725 CP040687.1 Protein Homology CDS 3250417 3251529 . - 0 ID=cds-QIE16444.1;Parent=gene-IXO1088_015725;Dbxref=NCBI_GP:QIE16444.1;Name=QIE16444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259549.1;locus_tag=IXO1088_015725;product=glycosyltransferase family 4 protein;protein_id=QIE16444.1;transl_table=11 CP040687.1 Genbank gene 3251526 3252656 . - . ID=gene-IXO1088_015730;Name=IXO1088_015730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015730 CP040687.1 Protein Homology CDS 3251526 3252656 . - 0 ID=cds-QIE16445.1;Parent=gene-IXO1088_015730;Dbxref=NCBI_GP:QIE16445.1;Name=QIE16445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010378292.1;locus_tag=IXO1088_015730;product=glycosyltransferase family 4 protein;protein_id=QIE16445.1;transl_table=11 CP040687.1 Genbank gene 3252778 3253476 . - . ID=gene-IXO1088_015735;Name=IXO1088_015735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015735 CP040687.1 Protein Homology CDS 3252778 3253476 . - 0 ID=cds-QIE16446.1;Parent=gene-IXO1088_015735;Dbxref=NCBI_GP:QIE16446.1;Name=QIE16446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155076.1;locus_tag=IXO1088_015735;product=class I SAM-dependent methyltransferase;protein_id=QIE16446.1;transl_table=11 CP040687.1 Genbank gene 3253473 3254708 . - . ID=gene-IXO1088_015740;Name=IXO1088_015740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015740 CP040687.1 Protein Homology CDS 3253473 3254708 . - 0 ID=cds-QIE16447.1;Parent=gene-IXO1088_015740;Dbxref=NCBI_GP:QIE16447.1;Name=QIE16447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159163.1;locus_tag=IXO1088_015740;product=amidohydrolase family protein;protein_id=QIE16447.1;transl_table=11 CP040687.1 Genbank gene 3254721 3255563 . - . ID=gene-IXO1088_015745;Name=IXO1088_015745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015745 CP040687.1 Protein Homology CDS 3254721 3255563 . - 0 ID=cds-QIE16448.1;Parent=gene-IXO1088_015745;Dbxref=NCBI_GP:QIE16448.1;Name=QIE16448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637046.1;locus_tag=IXO1088_015745;product=class I SAM-dependent methyltransferase;protein_id=QIE16448.1;transl_table=11 CP040687.1 Genbank gene 3255844 3256695 . - . ID=gene-IXO1088_015750;Name=IXO1088_015750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015750 CP040687.1 Protein Homology CDS 3255844 3256695 . - 0 ID=cds-QIE16449.1;Parent=gene-IXO1088_015750;Dbxref=NCBI_GP:QIE16449.1;Name=QIE16449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301333.1;locus_tag=IXO1088_015750;product=chain-length determining protein;protein_id=QIE16449.1;transl_table=11 CP040687.1 Genbank gene 3256741 3257874 . - . ID=gene-IXO1088_015755;Name=IXO1088_015755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015755 CP040687.1 Protein Homology CDS 3256741 3257874 . - 0 ID=cds-QIE16450.1;Parent=gene-IXO1088_015755;Dbxref=NCBI_GP:QIE16450.1;Name=QIE16450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924253.1;locus_tag=IXO1088_015755;product=hypothetical protein;protein_id=QIE16450.1;transl_table=11 CP040687.1 Genbank gene 3257871 3258821 . - . ID=gene-IXO1088_015760;Name=IXO1088_015760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015760 CP040687.1 Protein Homology CDS 3257871 3258821 . - 0 ID=cds-QIE16451.1;Parent=gene-IXO1088_015760;Dbxref=NCBI_GP:QIE16451.1;Name=QIE16451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089954.1;locus_tag=IXO1088_015760;product=glycosyltransferase;protein_id=QIE16451.1;transl_table=11 CP040687.1 Genbank gene 3258818 3260071 . - . ID=gene-IXO1088_015765;Name=IXO1088_015765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015765 CP040687.1 Protein Homology CDS 3258818 3260071 . - 0 ID=cds-QIE16452.1;Parent=gene-IXO1088_015765;Dbxref=NCBI_GP:QIE16452.1;Name=QIE16452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637042.1;locus_tag=IXO1088_015765;product=O-antigen translocase;protein_id=QIE16452.1;transl_table=11 CP040687.1 Genbank gene 3260068 3261180 . - . ID=gene-IXO1088_015770;Name=IXO1088_015770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015770 CP040687.1 Protein Homology CDS 3260068 3261180 . - 0 ID=cds-QIE16453.1;Parent=gene-IXO1088_015770;Dbxref=NCBI_GP:QIE16453.1;Name=QIE16453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408911.1;locus_tag=IXO1088_015770;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=QIE16453.1;transl_table=11 CP040687.1 Genbank gene 3261180 3262112 . - . ID=gene-IXO1088_015775;Name=IXO1088_015775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015775 CP040687.1 Protein Homology CDS 3261180 3262112 . - 0 ID=cds-QIE16454.1;Parent=gene-IXO1088_015775;Dbxref=NCBI_GP:QIE16454.1;Name=QIE16454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408912.1;locus_tag=IXO1088_015775;product=GNAT family N-acetyltransferase;protein_id=QIE16454.1;transl_table=11 CP040687.1 Genbank gene 3262099 3263052 . - . ID=gene-IXO1088_015780;Name=IXO1088_015780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015780 CP040687.1 Protein Homology CDS 3262099 3263052 . - 0 ID=cds-QIE16455.1;Parent=gene-IXO1088_015780;Dbxref=NCBI_GP:QIE16455.1;Name=QIE16455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117555.1;locus_tag=IXO1088_015780;product=hypothetical protein;protein_id=QIE16455.1;transl_table=11 CP040687.1 Genbank gene 3263056 3263727 . - . ID=gene-IXO1088_015785;Name=IXO1088_015785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015785 CP040687.1 Protein Homology CDS 3263056 3263727 . - 0 ID=cds-QIE16456.1;Parent=gene-IXO1088_015785;Dbxref=NCBI_GP:QIE16456.1;Name=QIE16456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966838.1;locus_tag=IXO1088_015785;product=acetyltransferase;protein_id=QIE16456.1;transl_table=11 CP040687.1 Genbank gene 3263724 3264155 . - . ID=gene-IXO1088_015790;Name=IXO1088_015790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015790 CP040687.1 Protein Homology CDS 3263724 3264155 . - 0 ID=cds-QIE16457.1;Parent=gene-IXO1088_015790;Dbxref=NCBI_GP:QIE16457.1;Name=QIE16457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914950.1;locus_tag=IXO1088_015790;product=WxcM-like domain-containing protein;protein_id=QIE16457.1;transl_table=11 CP040687.1 Genbank gene 3264550 3265080 . + . ID=gene-IXO1088_015795;Name=IXO1088_015795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015795 CP040687.1 Protein Homology CDS 3264550 3265080 . + 0 ID=cds-QIE18029.1;Parent=gene-IXO1088_015795;Dbxref=NCBI_GP:QIE18029.1;Name=QIE18029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112211.1;locus_tag=IXO1088_015795;product=cytochrome b;protein_id=QIE18029.1;transl_table=11 CP040687.1 Genbank gene 3265164 3266504 . + . ID=gene-IXO1088_015800;Name=IXO1088_015800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015800 CP040687.1 Protein Homology CDS 3265164 3266504 . + 0 ID=cds-QIE16458.1;Parent=gene-IXO1088_015800;Dbxref=NCBI_GP:QIE16458.1;Name=QIE16458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637038.1;locus_tag=IXO1088_015800;product=cytochrome C;protein_id=QIE16458.1;transl_table=11 CP040687.1 Genbank gene 3266530 3266922 . + . ID=gene-IXO1088_015805;Name=IXO1088_015805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015805 CP040687.1 Protein Homology CDS 3266530 3266922 . + 0 ID=cds-QIE16459.1;Parent=gene-IXO1088_015805;Dbxref=NCBI_GP:QIE16459.1;Name=QIE16459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347070.1;locus_tag=IXO1088_015805;product=c-type cytochrome;protein_id=QIE16459.1;transl_table=11 CP040687.1 Genbank gene 3267365 3268153 . + . ID=gene-IXO1088_015810;Name=IXO1088_015810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015810 CP040687.1 Protein Homology CDS 3267365 3268153 . + 0 ID=cds-QIE18030.1;Parent=gene-IXO1088_015810;Dbxref=NCBI_GP:QIE18030.1;Name=QIE18030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117552.1;locus_tag=IXO1088_015810;product=hypothetical protein;protein_id=QIE18030.1;transl_table=11 CP040687.1 Genbank gene 3268217 3268798 . + . ID=gene-IXO1088_015815;Name=IXO1088_015815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015815 CP040687.1 Protein Homology CDS 3268217 3268798 . + 0 ID=cds-QIE18031.1;Parent=gene-IXO1088_015815;Dbxref=NCBI_GP:QIE18031.1;Name=QIE18031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637035.1;locus_tag=IXO1088_015815;product=sigma-70 family RNA polymerase sigma factor;protein_id=QIE18031.1;transl_table=11 CP040687.1 Genbank gene 3268690 3269451 . + . ID=gene-IXO1088_015820;Name=IXO1088_015820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015820 CP040687.1 Protein Homology CDS 3268690 3269451 . + 0 ID=cds-QIE16460.1;Parent=gene-IXO1088_015820;Dbxref=NCBI_GP:QIE16460.1;Name=QIE16460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637034.1;locus_tag=IXO1088_015820;product=zf-HC2 domain-containing protein;protein_id=QIE16460.1;transl_table=11 CP040687.1 Genbank gene 3269448 3270773 . + . ID=gene-IXO1088_015825;Name=IXO1088_015825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015825 CP040687.1 Protein Homology CDS 3269448 3270773 . + 0 ID=cds-QIE16461.1;Parent=gene-IXO1088_015825;Dbxref=NCBI_GP:QIE16461.1;Name=QIE16461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637033.2;locus_tag=IXO1088_015825;product=serine protease;protein_id=QIE16461.1;transl_table=11 CP040687.1 Genbank gene 3270784 3271542 . + . ID=gene-IXO1088_015830;Name=IXO1088_015830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015830 CP040687.1 Protein Homology CDS 3270784 3271542 . + 0 ID=cds-QIE16462.1;Parent=gene-IXO1088_015830;Dbxref=NCBI_GP:QIE16462.1;Name=QIE16462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637032.1;locus_tag=IXO1088_015830;product=heme ABC transporter permease;protein_id=QIE16462.1;transl_table=11 CP040687.1 Genbank gene 3271539 3271745 . + . ID=gene-IXO1088_015835;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=IXO1088_015835 CP040687.1 Protein Homology CDS 3271539 3271745 . + 0 ID=cds-QIE16463.1;Parent=gene-IXO1088_015835;Dbxref=NCBI_GP:QIE16463.1;Name=QIE16463.1;gbkey=CDS;gene=ccmD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155059.1;locus_tag=IXO1088_015835;product=heme exporter protein CcmD;protein_id=QIE16463.1;transl_table=11 CP040687.1 Genbank gene 3271742 3272212 . + . ID=gene-IXO1088_015840;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=IXO1088_015840 CP040687.1 Protein Homology CDS 3271742 3272212 . + 0 ID=cds-QIE16464.1;Parent=gene-IXO1088_015840;Dbxref=NCBI_GP:QIE16464.1;Name=QIE16464.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637030.1;locus_tag=IXO1088_015840;product=cytochrome c maturation protein CcmE;protein_id=QIE16464.1;transl_table=11 CP040687.1 Genbank gene 3272276 3274264 . + . ID=gene-IXO1088_015845;Name=IXO1088_015845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015845 CP040687.1 Protein Homology CDS 3272276 3274264 . + 0 ID=cds-QIE16465.1;Parent=gene-IXO1088_015845;Dbxref=NCBI_GP:QIE16465.1;Name=QIE16465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259570.1;locus_tag=IXO1088_015845;product=heme lyase CcmF/NrfE family subunit;protein_id=QIE16465.1;transl_table=11 CP040687.1 Genbank gene 3274261 3274803 . + . ID=gene-IXO1088_015850;Name=IXO1088_015850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015850 CP040687.1 Protein Homology CDS 3274261 3274803 . + 0 ID=cds-QIE16466.1;Parent=gene-IXO1088_015850;Dbxref=NCBI_GP:QIE16466.1;Name=QIE16466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637028.1;locus_tag=IXO1088_015850;product=DsbE family thiol:disulfide interchange protein;protein_id=QIE16466.1;transl_table=11 CP040687.1 Genbank gene 3274803 3275300 . + . ID=gene-IXO1088_015855;Name=IXO1088_015855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015855 CP040687.1 Protein Homology CDS 3274803 3275300 . + 0 ID=cds-QIE18032.1;Parent=gene-IXO1088_015855;Dbxref=NCBI_GP:QIE18032.1;Name=QIE18032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363698.1;locus_tag=IXO1088_015855;product=cytochrome c-type biogenesis protein CcmH;protein_id=QIE18032.1;transl_table=11 CP040687.1 Genbank gene 3275300 3276004 . + . ID=gene-IXO1088_015860;Name=IXO1088_015860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015860 CP040687.1 Protein Homology CDS 3275300 3276004 . + 0 ID=cds-QIE18033.1;Parent=gene-IXO1088_015860;Dbxref=NCBI_GP:QIE18033.1;Name=QIE18033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363700.1;locus_tag=IXO1088_015860;product=C-type cytochrome biogenesis protein;protein_id=QIE18033.1;transl_table=11 CP040687.1 Genbank gene 3276129 3279830 . + . ID=gene-IXO1088_015865;Name=IXO1088_015865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015865 CP040687.1 Protein Homology CDS 3276129 3279830 . + 0 ID=cds-QIE16467.1;Parent=gene-IXO1088_015865;Dbxref=NCBI_GP:QIE16467.1;Name=QIE16467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258829.1;locus_tag=IXO1088_015865;product=avirulence protein;protein_id=QIE16467.1;transl_table=11 CP040687.1 Genbank gene 3280099 3280293 . + . ID=gene-IXO1088_015870;Name=IXO1088_015870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015870 CP040687.1 Protein Homology CDS 3280099 3280293 . + 0 ID=cds-QIE16468.1;Parent=gene-IXO1088_015870;Dbxref=NCBI_GP:QIE16468.1;Name=QIE16468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444931.1;locus_tag=IXO1088_015870;product=hypothetical protein;protein_id=QIE16468.1;transl_table=11 CP040687.1 Genbank gene 3280297 3280596 . + . ID=gene-IXO1088_015875;Name=IXO1088_015875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015875 CP040687.1 Protein Homology CDS 3280297 3280596 . + 0 ID=cds-QIE16469.1;Parent=gene-IXO1088_015875;Dbxref=NCBI_GP:QIE16469.1;Name=QIE16469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408930.1;locus_tag=IXO1088_015875;product=hypothetical protein;protein_id=QIE16469.1;transl_table=11 CP040687.1 Genbank gene 3280820 3284539 . + . ID=gene-IXO1088_015880;Name=IXO1088_015880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015880 CP040687.1 Protein Homology CDS 3280820 3284539 . + 0 ID=cds-QIE16470.1;Parent=gene-IXO1088_015880;Dbxref=NCBI_GP:QIE16470.1;Name=QIE16470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408928.1;locus_tag=IXO1088_015880;product=avirulence protein;protein_id=QIE16470.1;transl_table=11 CP040687.1 Genbank gene 3284808 3285002 . + . ID=gene-IXO1088_015885;Name=IXO1088_015885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015885 CP040687.1 Protein Homology CDS 3284808 3285002 . + 0 ID=cds-QIE16471.1;Parent=gene-IXO1088_015885;Dbxref=NCBI_GP:QIE16471.1;Name=QIE16471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444931.1;locus_tag=IXO1088_015885;product=hypothetical protein;protein_id=QIE16471.1;transl_table=11 CP040687.1 Genbank gene 3285006 3285305 . + . ID=gene-IXO1088_015890;Name=IXO1088_015890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015890 CP040687.1 Protein Homology CDS 3285006 3285305 . + 0 ID=cds-QIE16472.1;Parent=gene-IXO1088_015890;Dbxref=NCBI_GP:QIE16472.1;Name=QIE16472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408930.1;locus_tag=IXO1088_015890;product=hypothetical protein;protein_id=QIE16472.1;transl_table=11 CP040687.1 Genbank gene 3285529 3289959 . + . ID=gene-IXO1088_015895;Name=IXO1088_015895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015895 CP040687.1 Protein Homology CDS 3285529 3289959 . + 0 ID=cds-QIE16473.1;Parent=gene-IXO1088_015895;Dbxref=NCBI_GP:QIE16473.1;Name=QIE16473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408929.1;locus_tag=IXO1088_015895;product=avirulence protein;protein_id=QIE16473.1;transl_table=11 CP040687.1 Genbank gene 3290228 3290422 . + . ID=gene-IXO1088_015900;Name=IXO1088_015900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015900 CP040687.1 Protein Homology CDS 3290228 3290422 . + 0 ID=cds-QIE16474.1;Parent=gene-IXO1088_015900;Dbxref=NCBI_GP:QIE16474.1;Name=QIE16474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444931.1;locus_tag=IXO1088_015900;product=hypothetical protein;protein_id=QIE16474.1;transl_table=11 CP040687.1 Genbank gene 3290426 3290725 . + . ID=gene-IXO1088_015905;Name=IXO1088_015905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015905 CP040687.1 Protein Homology CDS 3290426 3290725 . + 0 ID=cds-QIE16475.1;Parent=gene-IXO1088_015905;Dbxref=NCBI_GP:QIE16475.1;Name=QIE16475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408930.1;locus_tag=IXO1088_015905;product=hypothetical protein;protein_id=QIE16475.1;transl_table=11 CP040687.1 Genbank gene 3290949 3295070 . + . ID=gene-IXO1088_015910;Name=IXO1088_015910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015910 CP040687.1 Protein Homology CDS 3290949 3295070 . + 0 ID=cds-QIE16476.1;Parent=gene-IXO1088_015910;Dbxref=NCBI_GP:QIE16476.1;Name=QIE16476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408931.1;locus_tag=IXO1088_015910;product=avirulence protein;protein_id=QIE16476.1;transl_table=11 CP040687.1 Genbank pseudogene 3295274 3295408 . + . ID=gene-IXO1088_015915;Name=IXO1088_015915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_015915;pseudo=true CP040687.1 Protein Homology CDS 3295274 3295408 . + 0 ID=cds-IXO1088_015915;Parent=gene-IXO1088_015915;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156636.1;locus_tag=IXO1088_015915;product=TetR/AcrR family transcriptional regulator;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3295550 3296110 . - . ID=gene-IXO1088_015920;Name=IXO1088_015920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_015920;pseudo=true CP040687.1 Protein Homology CDS 3295550 3296110 . - 0 ID=cds-IXO1088_015920;Parent=gene-IXO1088_015920;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303959.1;locus_tag=IXO1088_015920;product=multidrug transporter;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3296133 3297608 . - . ID=gene-IXO1088_015925;Name=IXO1088_015925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015925 CP040687.1 Protein Homology CDS 3296133 3297608 . - 0 ID=cds-QIE16477.1;Parent=gene-IXO1088_015925;Dbxref=NCBI_GP:QIE16477.1;Name=QIE16477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1088_015925;product=IS5-like element ISXoo5 family transposase;protein_id=QIE16477.1;transl_table=11 CP040687.1 Genbank gene 3297691 3300279 . - . ID=gene-IXO1088_015930;Name=IXO1088_015930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015930 CP040687.1 Protein Homology CDS 3297691 3300279 . - 0 ID=cds-QIE16478.1;Parent=gene-IXO1088_015930;Dbxref=NCBI_GP:QIE16478.1;Name=QIE16478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259579.1;locus_tag=IXO1088_015930;product=efflux RND transporter permease subunit;protein_id=QIE16478.1;transl_table=11 CP040687.1 Genbank gene 3300336 3301448 . - . ID=gene-IXO1088_015935;Name=IXO1088_015935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015935 CP040687.1 Protein Homology CDS 3300336 3301448 . - 0 ID=cds-QIE16479.1;Parent=gene-IXO1088_015935;Dbxref=NCBI_GP:QIE16479.1;Name=QIE16479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259580.1;locus_tag=IXO1088_015935;product=efflux RND transporter periplasmic adaptor subunit;protein_id=QIE16479.1;transl_table=11 CP040687.1 Genbank gene 3301573 3302151 . + . ID=gene-IXO1088_015940;Name=IXO1088_015940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015940 CP040687.1 Protein Homology CDS 3301573 3302151 . + 0 ID=cds-QIE16480.1;Parent=gene-IXO1088_015940;Dbxref=NCBI_GP:QIE16480.1;Name=QIE16480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259581.1;locus_tag=IXO1088_015940;product=TetR/AcrR family transcriptional regulator;protein_id=QIE16480.1;transl_table=11 CP040687.1 Genbank pseudogene 3302313 3302831 . - . ID=gene-IXO1088_015945;Name=IXO1088_015945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_015945;pseudo=true CP040687.1 Protein Homology CDS 3302313 3302831 . - 0 ID=cds-IXO1088_015945;Parent=gene-IXO1088_015945;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347381.1;locus_tag=IXO1088_015945;product=ATPase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3303637 3305724 . + . ID=gene-IXO1088_015950;Name=IXO1088_015950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015950 CP040687.1 Protein Homology CDS 3303637 3305724 . + 0 ID=cds-QIE16481.1;Parent=gene-IXO1088_015950;Dbxref=NCBI_GP:QIE16481.1;Name=QIE16481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003477119.1;locus_tag=IXO1088_015950;product=type III effector;protein_id=QIE16481.1;transl_table=11 CP040687.1 Genbank gene 3306111 3307208 . + . ID=gene-IXO1088_015955;Name=IXO1088_015955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015955 CP040687.1 Protein Homology CDS 3306111 3307208 . + 0 ID=cds-QIE16482.1;Parent=gene-IXO1088_015955;Dbxref=NCBI_GP:QIE16482.1;Name=QIE16482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006226249.1;locus_tag=IXO1088_015955;product=IS5 family transposase;protein_id=QIE16482.1;transl_table=11 CP040687.1 Genbank gene 3307625 3310705 . + . ID=gene-IXO1088_015960;Name=IXO1088_015960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015960 CP040687.1 Protein Homology CDS 3307625 3310705 . + 0 ID=cds-QIE16483.1;Parent=gene-IXO1088_015960;Dbxref=NCBI_GP:QIE16483.1;Name=QIE16483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503426.1;locus_tag=IXO1088_015960;product=histidine kinase;protein_id=QIE16483.1;transl_table=11 CP040687.1 Genbank pseudogene 3310948 3311685 . + . ID=gene-IXO1088_015965;Name=IXO1088_015965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_015965;pseudo=true CP040687.1 Protein Homology CDS 3310948 3311685 . + 0 ID=cds-IXO1088_015965;Parent=gene-IXO1088_015965;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=IXO1088_015965;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3311701 3312596 . - . ID=gene-IXO1088_015970;Name=IXO1088_015970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_015970;pseudo=true CP040687.1 Protein Homology CDS 3311701 3312596 . - 0 ID=cds-IXO1088_015970;Parent=gene-IXO1088_015970;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011345585.1;locus_tag=IXO1088_015970;product=IS256 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3312576 3313172 . + . ID=gene-IXO1088_015975;Name=IXO1088_015975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_015975;pseudo=true CP040687.1 Protein Homology CDS 3312576 3313172 . + 0 ID=cds-IXO1088_015975;Parent=gene-IXO1088_015975;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347473.1;locus_tag=IXO1088_015975;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3313563 3314270 . + . ID=gene-IXO1088_015980;Name=IXO1088_015980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015980 CP040687.1 Protein Homology CDS 3313563 3314270 . + 0 ID=cds-QIE18034.1;Parent=gene-IXO1088_015980;Dbxref=NCBI_GP:QIE18034.1;Name=QIE18034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373387.1;locus_tag=IXO1088_015980;product=response regulator;protein_id=QIE18034.1;transl_table=11 CP040687.1 Genbank gene 3314267 3315259 . + . ID=gene-IXO1088_015985;Name=IXO1088_015985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015985 CP040687.1 Protein Homology CDS 3314267 3315259 . + 0 ID=cds-QIE16484.1;Parent=gene-IXO1088_015985;Dbxref=NCBI_GP:QIE16484.1;Name=QIE16484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373388.1;locus_tag=IXO1088_015985;product=c-type cytochrome;protein_id=QIE16484.1;transl_table=11 CP040687.1 Genbank gene 3315256 3317715 . + . ID=gene-IXO1088_015990;Name=IXO1088_015990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015990 CP040687.1 Protein Homology CDS 3315256 3317715 . + 0 ID=cds-QIE16485.1;Parent=gene-IXO1088_015990;Dbxref=NCBI_GP:QIE16485.1;Name=QIE16485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503434.1;locus_tag=IXO1088_015990;product=two-component system VirA-like sensor kinase;protein_id=QIE16485.1;transl_table=11 CP040687.1 Genbank gene 3317829 3318809 . + . ID=gene-IXO1088_015995;Name=IXO1088_015995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_015995 CP040687.1 Protein Homology CDS 3317829 3318809 . + 0 ID=cds-QIE16486.1;Parent=gene-IXO1088_015995;Dbxref=NCBI_GP:QIE16486.1;Name=QIE16486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259590.1;locus_tag=IXO1088_015995;product=LysR family transcriptional regulator;protein_id=QIE16486.1;transl_table=11 CP040687.1 Genbank gene 3318818 3319846 . + . ID=gene-IXO1088_016000;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=IXO1088_016000 CP040687.1 Protein Homology CDS 3318818 3319846 . + 0 ID=cds-QIE16487.1;Parent=gene-IXO1088_016000;Dbxref=NCBI_GP:QIE16487.1;Name=QIE16487.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373396.1;locus_tag=IXO1088_016000;product=type VI secretion system protein TssA;protein_id=QIE16487.1;transl_table=11 CP040687.1 Genbank gene 3319907 3319982 . + . ID=gene-IXO1088_016005;Name=IXO1088_016005;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_016005 CP040687.1 cmsearch ncRNA 3319907 3319982 . + . ID=rna-IXO1088_016005;Parent=gene-IXO1088_016005;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_016005;product=sX9 sRNA CP040687.1 cmsearch exon 3319907 3319982 . + . ID=exon-IXO1088_016005-1;Parent=rna-IXO1088_016005;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_016005;product=sX9 sRNA CP040687.1 Genbank gene 3320019 3320345 . - . ID=gene-IXO1088_016010;Name=IXO1088_016010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016010 CP040687.1 Protein Homology CDS 3320019 3320345 . - 0 ID=cds-QIE16488.1;Parent=gene-IXO1088_016010;Dbxref=NCBI_GP:QIE16488.1;Name=QIE16488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300105.1;locus_tag=IXO1088_016010;product=hypothetical protein;protein_id=QIE16488.1;transl_table=11 CP040687.1 Genbank gene 3320342 3323245 . - . ID=gene-IXO1088_016015;Name=IXO1088_016015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016015 CP040687.1 Protein Homology CDS 3320342 3323245 . - 0 ID=cds-QIE16489.1;Parent=gene-IXO1088_016015;Dbxref=NCBI_GP:QIE16489.1;Name=QIE16489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010378684.1;locus_tag=IXO1088_016015;product=serine/threonine protein kinase;protein_id=QIE16489.1;transl_table=11 CP040687.1 Genbank gene 3323242 3323964 . - . ID=gene-IXO1088_016020;Name=IXO1088_016020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016020 CP040687.1 Protein Homology CDS 3323242 3323964 . - 0 ID=cds-QIE16490.1;Parent=gene-IXO1088_016020;Dbxref=NCBI_GP:QIE16490.1;Name=QIE16490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347368.1;locus_tag=IXO1088_016020;product=serine/threonine-protein phosphatase;protein_id=QIE16490.1;transl_table=11 CP040687.1 Genbank gene 3323961 3324608 . - . ID=gene-IXO1088_016025;Name=tagF;gbkey=Gene;gene=tagF;gene_biotype=protein_coding;locus_tag=IXO1088_016025 CP040687.1 Protein Homology CDS 3323961 3324608 . - 0 ID=cds-QIE16491.1;Parent=gene-IXO1088_016025;Dbxref=NCBI_GP:QIE16491.1;Name=QIE16491.1;gbkey=CDS;gene=tagF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373406.1;locus_tag=IXO1088_016025;product=type VI secretion system-associated protein TagF;protein_id=QIE16491.1;transl_table=11 CP040687.1 Genbank gene 3324605 3328063 . - . ID=gene-IXO1088_016030;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=IXO1088_016030 CP040687.1 Protein Homology CDS 3324605 3328063 . - 0 ID=cds-QIE16492.1;Parent=gene-IXO1088_016030;Dbxref=NCBI_GP:QIE16492.1;Name=QIE16492.1;gbkey=CDS;gene=tssM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113161.1;locus_tag=IXO1088_016030;product=type VI secretion system membrane subunit TssM;protein_id=QIE16492.1;transl_table=11 CP040687.1 Genbank gene 3328067 3329383 . - . ID=gene-IXO1088_016035;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=IXO1088_016035 CP040687.1 Protein Homology CDS 3328067 3329383 . - 0 ID=cds-QIE16493.1;Parent=gene-IXO1088_016035;Dbxref=NCBI_GP:QIE16493.1;Name=QIE16493.1;gbkey=CDS;gene=tssL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373409.1;locus_tag=IXO1088_016035;product=type VI secretion system protein TssL;protein_id=QIE16493.1;transl_table=11 CP040687.1 Genbank gene 3329385 3330722 . - . ID=gene-IXO1088_016040;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=IXO1088_016040 CP040687.1 Protein Homology CDS 3329385 3330722 . - 0 ID=cds-QIE16494.1;Parent=gene-IXO1088_016040;Dbxref=NCBI_GP:QIE16494.1;Name=QIE16494.1;gbkey=CDS;gene=tssK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373410.1;locus_tag=IXO1088_016040;product=type VI secretion system baseplate subunit TssK;protein_id=QIE16494.1;transl_table=11 CP040687.1 Genbank gene 3330719 3332131 . - . ID=gene-IXO1088_016045;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=IXO1088_016045 CP040687.1 Protein Homology CDS 3330719 3332131 . - 0 ID=cds-QIE16495.1;Parent=gene-IXO1088_016045;Dbxref=NCBI_GP:QIE16495.1;Name=QIE16495.1;gbkey=CDS;gene=tagH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113159.1;locus_tag=IXO1088_016045;product=type VI secretion system-associated FHA domain protein TagH;protein_id=QIE16495.1;transl_table=11 CP040687.1 Genbank gene 3332128 3332667 . - . ID=gene-IXO1088_016050;Name=IXO1088_016050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016050 CP040687.1 Protein Homology CDS 3332128 3332667 . - 0 ID=cds-QIE16496.1;Parent=gene-IXO1088_016050;Dbxref=NCBI_GP:QIE16496.1;Name=QIE16496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373413.1;locus_tag=IXO1088_016050;product=hypothetical protein;protein_id=QIE16496.1;transl_table=11 CP040687.1 Genbank gene 3332676 3334613 . - . ID=gene-IXO1088_016055;Name=tssI;gbkey=Gene;gene=tssI;gene_biotype=protein_coding;locus_tag=IXO1088_016055 CP040687.1 Protein Homology CDS 3332676 3334613 . - 0 ID=cds-QIE16497.1;Parent=gene-IXO1088_016055;Dbxref=NCBI_GP:QIE16497.1;Name=QIE16497.1;gbkey=CDS;gene=tssI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010378659.1;locus_tag=IXO1088_016055;product=type VI secretion system tip protein VgrG;protein_id=QIE16497.1;transl_table=11 CP040687.1 Genbank gene 3334878 3335336 . - . ID=gene-IXO1088_016060;Name=IXO1088_016060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016060 CP040687.1 Protein Homology CDS 3334878 3335336 . - 0 ID=cds-QIE16498.1;Parent=gene-IXO1088_016060;Dbxref=NCBI_GP:QIE16498.1;Name=QIE16498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118730.1;locus_tag=IXO1088_016060;product=hypothetical protein;protein_id=QIE16498.1;transl_table=11 CP040687.1 Genbank pseudogene 3335477 3335662 . - . ID=gene-IXO1088_016065;Name=IXO1088_016065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016065;pseudo=true CP040687.1 Protein Homology CDS 3335477 3335662 . - 0 ID=cds-IXO1088_016065;Parent=gene-IXO1088_016065;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=IXO1088_016065;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3335723 3336217 . - . ID=gene-IXO1088_016070;Name=IXO1088_016070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016070 CP040687.1 GeneMarkS-2+ CDS 3335723 3336217 . - 0 ID=cds-QIE16499.1;Parent=gene-IXO1088_016070;Dbxref=NCBI_GP:QIE16499.1;Name=QIE16499.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_016070;product=hypothetical protein;protein_id=QIE16499.1;transl_table=11 CP040687.1 Genbank gene 3336283 3336780 . - . ID=gene-IXO1088_016075;Name=IXO1088_016075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016075 CP040687.1 Protein Homology CDS 3336283 3336780 . - 0 ID=cds-QIE16500.1;Parent=gene-IXO1088_016075;Dbxref=NCBI_GP:QIE16500.1;Name=QIE16500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159434.1;locus_tag=IXO1088_016075;product=hypothetical protein;protein_id=QIE16500.1;transl_table=11 CP040687.1 Genbank gene 3336969 3339674 . - . ID=gene-IXO1088_016080;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;locus_tag=IXO1088_016080 CP040687.1 Protein Homology CDS 3336969 3339674 . - 0 ID=cds-QIE16501.1;Parent=gene-IXO1088_016080;Dbxref=NCBI_GP:QIE16501.1;Name=QIE16501.1;gbkey=CDS;gene=tssH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159435.1;locus_tag=IXO1088_016080;product=type VI secretion system ATPase TssH;protein_id=QIE16501.1;transl_table=11 CP040687.1 Genbank gene 3339707 3340717 . - . ID=gene-IXO1088_016085;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=IXO1088_016085 CP040687.1 Protein Homology CDS 3339707 3340717 . - 0 ID=cds-QIE16502.1;Parent=gene-IXO1088_016085;Dbxref=NCBI_GP:QIE16502.1;Name=QIE16502.1;gbkey=CDS;gene=tssG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113157.1;locus_tag=IXO1088_016085;product=type VI secretion system baseplate subunit TssG;protein_id=QIE16502.1;transl_table=11 CP040687.1 Genbank gene 3340681 3342558 . - . ID=gene-IXO1088_016090;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=IXO1088_016090 CP040687.1 Protein Homology CDS 3340681 3342558 . - 0 ID=cds-QIE16503.1;Parent=gene-IXO1088_016090;Dbxref=NCBI_GP:QIE16503.1;Name=QIE16503.1;gbkey=CDS;gene=tssF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571950.1;locus_tag=IXO1088_016090;product=type VI secretion system baseplate subunit TssF;protein_id=QIE16503.1;transl_table=11 CP040687.1 Genbank gene 3342562 3343065 . - . ID=gene-IXO1088_016095;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=IXO1088_016095 CP040687.1 Protein Homology CDS 3342562 3343065 . - 0 ID=cds-QIE16504.1;Parent=gene-IXO1088_016095;Dbxref=NCBI_GP:QIE16504.1;Name=QIE16504.1;gbkey=CDS;gene=tssE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300091.1;locus_tag=IXO1088_016095;product=type VI secretion system baseplate subunit TssE;protein_id=QIE16504.1;transl_table=11 CP040687.1 Genbank gene 3343053 3343886 . - . ID=gene-IXO1088_016100;Name=IXO1088_016100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016100 CP040687.1 Protein Homology CDS 3343053 3343886 . - 0 ID=cds-QIE16505.1;Parent=gene-IXO1088_016100;Dbxref=NCBI_GP:QIE16505.1;Name=QIE16505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373429.1;locus_tag=IXO1088_016100;product=ImpE protein;protein_id=QIE16505.1;transl_table=11 CP040687.1 Genbank gene 3343922 3344425 . - . ID=gene-IXO1088_016105;Name=IXO1088_016105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016105 CP040687.1 Protein Homology CDS 3343922 3344425 . - 0 ID=cds-QIE16506.1;Parent=gene-IXO1088_016105;Dbxref=NCBI_GP:QIE16506.1;Name=QIE16506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259605.1;locus_tag=IXO1088_016105;product=type VI secretion system tube protein Hcp;protein_id=QIE16506.1;transl_table=11 CP040687.1 Genbank gene 3344525 3346039 . - . ID=gene-IXO1088_016110;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=IXO1088_016110 CP040687.1 Protein Homology CDS 3344525 3346039 . - 0 ID=cds-QIE16507.1;Parent=gene-IXO1088_016110;Dbxref=NCBI_GP:QIE16507.1;Name=QIE16507.1;gbkey=CDS;gene=tssC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300089.1;locus_tag=IXO1088_016110;product=type VI secretion system contractile sheath large subunit;protein_id=QIE16507.1;transl_table=11 CP040687.1 Genbank gene 3346032 3346538 . - . ID=gene-IXO1088_016115;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=IXO1088_016115 CP040687.1 Protein Homology CDS 3346032 3346538 . - 0 ID=cds-QIE16508.1;Parent=gene-IXO1088_016115;Dbxref=NCBI_GP:QIE16508.1;Name=QIE16508.1;gbkey=CDS;gene=tssB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003467682.1;locus_tag=IXO1088_016115;product=type VI secretion system contractile sheath small subunit;protein_id=QIE16508.1;transl_table=11 CP040687.1 Genbank pseudogene 3346998 3347063 . - . ID=gene-IXO1088_016120;Name=IXO1088_016120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016120;pseudo=true CP040687.1 Protein Homology CDS 3346998 3347063 . - 0 ID=cds-IXO1088_016120;Parent=gene-IXO1088_016120;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463173.1;locus_tag=IXO1088_016120;product=phosphopantetheinyl transferase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3347032 3347190 . - . ID=gene-IXO1088_016125;Name=IXO1088_016125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016125;pseudo=true CP040687.1 Protein Homology CDS 3347032 3347190 . - 0 ID=cds-IXO1088_016125;Parent=gene-IXO1088_016125;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=IXO1088_016125;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3347171 3347701 . - . ID=gene-IXO1088_016130;Name=IXO1088_016130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016130;pseudo=true CP040687.1 Protein Homology CDS 3347171 3347701 . - 0 ID=cds-IXO1088_016130;Parent=gene-IXO1088_016130;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444640.1;locus_tag=IXO1088_016130;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3347897 3348865 . - . ID=gene-IXO1088_016135;Name=IXO1088_016135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016135 CP040687.1 Protein Homology CDS 3347897 3348865 . - 0 ID=cds-QIE16509.1;Parent=gene-IXO1088_016135;Dbxref=NCBI_GP:QIE16509.1;Name=QIE16509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_016135;product=IS5-like element ISXo1 family transposase;protein_id=QIE16509.1;transl_table=11 CP040687.1 Genbank gene 3349014 3350249 . + . ID=gene-IXO1088_016140;Name=IXO1088_016140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016140 CP040687.1 Protein Homology CDS 3349014 3350249 . + 0 ID=cds-QIE16510.1;Parent=gene-IXO1088_016140;Dbxref=NCBI_GP:QIE16510.1;Name=QIE16510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1088_016140;product=ISL3-like element ISXoo13 family transposase;protein_id=QIE16510.1;transl_table=11 CP040687.1 Genbank gene 3350253 3352211 . - . ID=gene-IXO1088_016145;Name=IXO1088_016145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016145 CP040687.1 Protein Homology CDS 3350253 3352211 . - 0 ID=cds-QIE16511.1;Parent=gene-IXO1088_016145;Dbxref=NCBI_GP:QIE16511.1;Name=QIE16511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444485.1;locus_tag=IXO1088_016145;product=hypothetical protein;protein_id=QIE16511.1;transl_table=11 CP040687.1 Genbank gene 3352329 3353285 . + . ID=gene-IXO1088_016150;Name=IXO1088_016150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016150 CP040687.1 Protein Homology CDS 3352329 3353285 . + 0 ID=cds-QIE16512.1;Parent=gene-IXO1088_016150;Dbxref=NCBI_GP:QIE16512.1;Name=QIE16512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=IXO1088_016150;product=IS30-like element IS1112a family transposase;protein_id=QIE16512.1;transl_table=11 CP040687.1 Genbank gene 3353260 3354033 . - . ID=gene-IXO1088_016155;Name=IXO1088_016155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016155 CP040687.1 Protein Homology CDS 3353260 3354033 . - 0 ID=cds-QIE18035.1;Parent=gene-IXO1088_016155;Dbxref=NCBI_GP:QIE18035.1;Name=QIE18035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002807738.1;locus_tag=IXO1088_016155;product=hypothetical protein;protein_id=QIE18035.1;transl_table=11 CP040687.1 Genbank pseudogene 3354062 3354325 . - . ID=gene-IXO1088_016160;Name=IXO1088_016160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016160;pseudo=true CP040687.1 Protein Homology CDS 3354062 3354325 . - 0 ID=cds-IXO1088_016160;Parent=gene-IXO1088_016160;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408806.1;locus_tag=IXO1088_016160;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3354390 3355358 . + . ID=gene-IXO1088_016165;Name=IXO1088_016165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016165 CP040687.1 Protein Homology CDS 3354390 3355358 . + 0 ID=cds-QIE16513.1;Parent=gene-IXO1088_016165;Dbxref=NCBI_GP:QIE16513.1;Name=QIE16513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_016165;product=IS5-like element ISXo1 family transposase;protein_id=QIE16513.1;transl_table=11 CP040687.1 Genbank gene 3355611 3356579 . + . ID=gene-IXO1088_016170;Name=IXO1088_016170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016170 CP040687.1 Protein Homology CDS 3355611 3356579 . + 0 ID=cds-QIE16514.1;Parent=gene-IXO1088_016170;Dbxref=NCBI_GP:QIE16514.1;Name=QIE16514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_016170;product=IS5-like element ISXo1 family transposase;protein_id=QIE16514.1;transl_table=11 CP040687.1 Genbank pseudogene 3356706 3359216 . - . ID=gene-IXO1088_016175;Name=IXO1088_016175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016175;pseudo=true CP040687.1 Protein Homology CDS 3356706 3359216 . - 0 ID=cds-IXO1088_016175;Parent=gene-IXO1088_016175;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445479.1;locus_tag=IXO1088_016175;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3359213 3359419 . - . ID=gene-IXO1088_016180;Name=IXO1088_016180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016180;pseudo=true CP040687.1 Protein Homology CDS 3359213 3359419 . - 0 ID=cds-IXO1088_016180;Parent=gene-IXO1088_016180;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444637.1;locus_tag=IXO1088_016180;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3359454 3359711 . - . ID=gene-IXO1088_016185;Name=IXO1088_016185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016185;pseudo=true CP040687.1 Protein Homology CDS 3359454 3359711 . - 0 ID=cds-IXO1088_016185;Parent=gene-IXO1088_016185;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504811.1;locus_tag=IXO1088_016185;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3359874 3361703 . - . ID=gene-IXO1088_016190;Name=IXO1088_016190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016190 CP040687.1 Protein Homology CDS 3359874 3361703 . - 0 ID=cds-QIE16515.1;Parent=gene-IXO1088_016190;Dbxref=NCBI_GP:QIE16515.1;Name=QIE16515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445380.1;locus_tag=IXO1088_016190;product=transmembrane repetitive protein;protein_id=QIE16515.1;transl_table=11 CP040687.1 Genbank gene 3361717 3362316 . - . ID=gene-IXO1088_016195;Name=IXO1088_016195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016195 CP040687.1 Protein Homology CDS 3361717 3362316 . - 0 ID=cds-QIE16516.1;Parent=gene-IXO1088_016195;Dbxref=NCBI_GP:QIE16516.1;Name=QIE16516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637444.1;locus_tag=IXO1088_016195;product=NfuA family Fe-S biogenesis protein;protein_id=QIE16516.1;transl_table=11 CP040687.1 Genbank gene 3362404 3362760 . + . ID=gene-IXO1088_016200;Name=IXO1088_016200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016200 CP040687.1 Protein Homology CDS 3362404 3362760 . + 0 ID=cds-QIE16517.1;Parent=gene-IXO1088_016200;Dbxref=NCBI_GP:QIE16517.1;Name=QIE16517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445382.1;locus_tag=IXO1088_016200;product=4a-hydroxytetrahydrobiopterin dehydratase;protein_id=QIE16517.1;transl_table=11 CP040687.1 Genbank gene 3362757 3363179 . + . ID=gene-IXO1088_016205;Name=IXO1088_016205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016205 CP040687.1 Protein Homology CDS 3362757 3363179 . + 0 ID=cds-QIE16518.1;Parent=gene-IXO1088_016205;Dbxref=NCBI_GP:QIE16518.1;Name=QIE16518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637446.1;locus_tag=IXO1088_016205;product=energy transducer TonB;protein_id=QIE16518.1;transl_table=11 CP040687.1 Genbank gene 3363195 3363428 . + . ID=gene-IXO1088_016210;Name=IXO1088_016210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016210 CP040687.1 Protein Homology CDS 3363195 3363428 . + 0 ID=cds-QIE16519.1;Parent=gene-IXO1088_016210;Dbxref=NCBI_GP:QIE16519.1;Name=QIE16519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445384.1;locus_tag=IXO1088_016210;product=zinc transporter ZupT;protein_id=QIE16519.1;transl_table=11 CP040687.1 Genbank gene 3363479 3363715 . + . ID=gene-IXO1088_016215;Name=IXO1088_016215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016215 CP040687.1 Protein Homology CDS 3363479 3363715 . + 0 ID=cds-QIE18036.1;Parent=gene-IXO1088_016215;Dbxref=NCBI_GP:QIE18036.1;Name=QIE18036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301513.1;locus_tag=IXO1088_016215;product=zinc transporter ZupT;protein_id=QIE18036.1;transl_table=11 CP040687.1 Genbank gene 3364064 3365848 . + . ID=gene-IXO1088_016220;Name=IXO1088_016220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016220 CP040687.1 Protein Homology CDS 3364064 3365848 . + 0 ID=cds-QIE18037.1;Parent=gene-IXO1088_016220;Dbxref=NCBI_GP:QIE18037.1;Name=QIE18037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503470.1;locus_tag=IXO1088_016220;product=DUF3300 domain-containing protein;protein_id=QIE18037.1;transl_table=11 CP040687.1 Genbank gene 3365881 3366867 . - . ID=gene-IXO1088_016225;Name=IXO1088_016225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016225 CP040687.1 Protein Homology CDS 3365881 3366867 . - 0 ID=cds-QIE16520.1;Parent=gene-IXO1088_016225;Dbxref=NCBI_GP:QIE16520.1;Name=QIE16520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303869.1;locus_tag=IXO1088_016225;product=RluA family pseudouridine synthase;protein_id=QIE16520.1;transl_table=11 CP040687.1 Genbank gene 3367278 3370991 . + . ID=gene-IXO1088_016230;Name=IXO1088_016230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016230 CP040687.1 Protein Homology CDS 3367278 3370991 . + 0 ID=cds-QIE18038.1;Parent=gene-IXO1088_016230;Dbxref=NCBI_GP:QIE18038.1;Name=QIE18038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113176.1;locus_tag=IXO1088_016230;product=Rne/Rng family ribonuclease;protein_id=QIE18038.1;transl_table=11 CP040687.1 Genbank pseudogene 3371207 3371399 . - . ID=gene-IXO1088_016235;Name=IXO1088_016235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016235;pseudo=true CP040687.1 Protein Homology CDS 3371207 3371399 . - 0 ID=cds-IXO1088_016235;Parent=gene-IXO1088_016235;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010378768.1;locus_tag=IXO1088_016235;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3371517 3372280 . - . ID=gene-IXO1088_016240;Name=IXO1088_016240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016240 CP040687.1 Protein Homology CDS 3371965 3372280 . - 0 ID=cds-QIE16521.1;Parent=gene-IXO1088_016240;Dbxref=NCBI_GP:QIE16521.1;Name=QIE16521.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_016240;product=IS5 family transposase;protein_id=QIE16521.1;transl_table=11 CP040687.1 Protein Homology CDS 3371517 3371965 . - 2 ID=cds-QIE16521.1;Parent=gene-IXO1088_016240;Dbxref=NCBI_GP:QIE16521.1;Name=QIE16521.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_016240;product=IS5 family transposase;protein_id=QIE16521.1;transl_table=11 CP040687.1 Genbank gene 3372384 3373031 . - . ID=gene-IXO1088_016245;Name=IXO1088_016245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016245 CP040687.1 Protein Homology CDS 3372384 3373031 . - 0 ID=cds-QIE16522.1;Parent=gene-IXO1088_016245;Dbxref=NCBI_GP:QIE16522.1;Name=QIE16522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637450.1;locus_tag=IXO1088_016245;product=response regulator;protein_id=QIE16522.1;transl_table=11 CP040687.1 Genbank gene 3373253 3374014 . - . ID=gene-IXO1088_016250;Name=IXO1088_016250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016250 CP040687.1 Protein Homology CDS 3373253 3374014 . - 0 ID=cds-QIE16523.1;Parent=gene-IXO1088_016250;Dbxref=NCBI_GP:QIE16523.1;Name=QIE16523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373348.1;locus_tag=IXO1088_016250;product=sulfurtransferase;protein_id=QIE16523.1;transl_table=11 CP040687.1 Genbank gene 3374114 3374479 . - . ID=gene-IXO1088_016255;Name=IXO1088_016255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016255 CP040687.1 Protein Homology CDS 3374114 3374479 . - 0 ID=cds-QIE16524.1;Parent=gene-IXO1088_016255;Dbxref=NCBI_GP:QIE16524.1;Name=QIE16524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637452.1;locus_tag=IXO1088_016255;product=hypothetical protein;protein_id=QIE16524.1;transl_table=11 CP040687.1 Genbank gene 3374538 3374969 . + . ID=gene-IXO1088_016260;Name=IXO1088_016260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016260 CP040687.1 Protein Homology CDS 3374538 3374969 . + 0 ID=cds-QIE16525.1;Parent=gene-IXO1088_016260;Dbxref=NCBI_GP:QIE16525.1;Name=QIE16525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408975.1;locus_tag=IXO1088_016260;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=QIE16525.1;transl_table=11 CP040687.1 Genbank gene 3374981 3376243 . + . ID=gene-IXO1088_016265;Name=IXO1088_016265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016265 CP040687.1 Protein Homology CDS 3374981 3376243 . + 0 ID=cds-QIE16526.1;Parent=gene-IXO1088_016265;Dbxref=NCBI_GP:QIE16526.1;Name=QIE16526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010378776.1;locus_tag=IXO1088_016265;product=TIGR03862 family flavoprotein;protein_id=QIE16526.1;transl_table=11 CP040687.1 Genbank gene 3376227 3377519 . - . ID=gene-IXO1088_016270;Name=IXO1088_016270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016270 CP040687.1 Protein Homology CDS 3376227 3377519 . - 0 ID=cds-QIE16527.1;Parent=gene-IXO1088_016270;Dbxref=NCBI_GP:QIE16527.1;Name=QIE16527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503478.1;locus_tag=IXO1088_016270;product=nucleotide sugar dehydrogenase;protein_id=QIE16527.1;transl_table=11 CP040687.1 Genbank gene 3377661 3377744 . + . ID=gene-IXO1088_016275;Name=IXO1088_016275;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_016275 CP040687.1 tRNAscan-SE tRNA 3377661 3377744 . + . ID=rna-IXO1088_016275;Parent=gene-IXO1088_016275;anticodon=(pos:3377695..3377697);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_016275;product=tRNA-Leu CP040687.1 tRNAscan-SE exon 3377661 3377744 . + . ID=exon-IXO1088_016275-1;Parent=rna-IXO1088_016275;anticodon=(pos:3377695..3377697);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_016275;product=tRNA-Leu CP040687.1 Genbank gene 3377889 3378659 . + . ID=gene-IXO1088_016280;Name=IXO1088_016280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016280 CP040687.1 Protein Homology CDS 3377889 3378659 . + 0 ID=cds-QIE16528.1;Parent=gene-IXO1088_016280;Dbxref=NCBI_GP:QIE16528.1;Name=QIE16528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408977.1;locus_tag=IXO1088_016280;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=QIE16528.1;transl_table=11 CP040687.1 Genbank pseudogene 3379071 3379406 . + . ID=gene-IXO1088_016285;Name=IXO1088_016285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016285;pseudo=true CP040687.1 Protein Homology CDS 3379071 3379406 . + 0 ID=cds-IXO1088_016285;Parent=gene-IXO1088_016285;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_016285;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3379416 3380651 . - . ID=gene-IXO1088_016290;Name=IXO1088_016290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016290 CP040687.1 Protein Homology CDS 3379416 3380651 . - 0 ID=cds-QIE16529.1;Parent=gene-IXO1088_016290;Dbxref=NCBI_GP:QIE16529.1;Name=QIE16529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1088_016290;product=ISL3-like element ISXoo13 family transposase;protein_id=QIE16529.1;transl_table=11 CP040687.1 Genbank pseudogene 3380715 3381710 . + . ID=gene-IXO1088_016295;Name=IXO1088_016295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016295;pseudo=true CP040687.1 Protein Homology CDS 3380715 3381710 . + 0 ID=cds-IXO1088_016295;Parent=gene-IXO1088_016295;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_016295;product=IS701-like element ISXo15 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3381950 3382207 . - . ID=gene-IXO1088_016300;Name=IXO1088_016300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016300 CP040687.1 Protein Homology CDS 3381950 3382207 . - 0 ID=cds-QIE16530.1;Parent=gene-IXO1088_016300;Dbxref=NCBI_GP:QIE16530.1;Name=QIE16530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812907.1;locus_tag=IXO1088_016300;product=stress-induced protein;protein_id=QIE16530.1;transl_table=11 CP040687.1 Genbank gene 3382647 3383630 . + . ID=gene-IXO1088_016305;Name=IXO1088_016305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016305 CP040687.1 Protein Homology CDS 3382647 3383630 . + 0 ID=cds-QIE16531.1;Parent=gene-IXO1088_016305;Dbxref=NCBI_GP:QIE16531.1;Name=QIE16531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=IXO1088_016305;product=IS5 family transposase;protein_id=QIE16531.1;transl_table=11 CP040687.1 Genbank gene 3383883 3384845 . + . ID=gene-IXO1088_016310;Name=IXO1088_016310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016310 CP040687.1 Protein Homology CDS 3383883 3384845 . + 0 ID=cds-QIE16532.1;Parent=gene-IXO1088_016310;Dbxref=NCBI_GP:QIE16532.1;Name=QIE16532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1088_016310;product=IS1595 family transposase;protein_id=QIE16532.1;transl_table=11 CP040687.1 Genbank gene 3385285 3385464 . - . ID=gene-IXO1088_016315;Name=IXO1088_016315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016315 CP040687.1 Protein Homology CDS 3385285 3385464 . - 0 ID=cds-QIE16533.1;Parent=gene-IXO1088_016315;Dbxref=NCBI_GP:QIE16533.1;Name=QIE16533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445400.1;locus_tag=IXO1088_016315;product=hypothetical protein;protein_id=QIE16533.1;transl_table=11 CP040687.1 Genbank gene 3385829 3386794 . - . ID=gene-IXO1088_016320;Name=IXO1088_016320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016320 CP040687.1 Protein Homology CDS 3385829 3386794 . - 0 ID=cds-QIE16534.1;Parent=gene-IXO1088_016320;Dbxref=NCBI_GP:QIE16534.1;Name=QIE16534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_016320;product=IS1595-like element ISXo5 family transposase;protein_id=QIE16534.1;transl_table=11 CP040687.1 Genbank pseudogene 3386883 3387355 . - . ID=gene-IXO1088_016325;Name=IXO1088_016325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016325;pseudo=true CP040687.1 Protein Homology CDS 3386883 3387355 . - 0 ID=cds-IXO1088_016325;Parent=gene-IXO1088_016325;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637370.1;locus_tag=IXO1088_016325;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3387360 3387917 . - . ID=gene-IXO1088_016330;Name=IXO1088_016330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016330;pseudo=true CP040687.1 Protein Homology CDS 3387360 3387917 . - 0 ID=cds-IXO1088_016330;Parent=gene-IXO1088_016330;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637369.1;locus_tag=IXO1088_016330;product=ANTAR domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3388002 3388979 . + . ID=gene-IXO1088_016335;Name=IXO1088_016335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016335 CP040687.1 Protein Homology CDS 3388002 3388979 . + 0 ID=cds-QIE16535.1;Parent=gene-IXO1088_016335;Dbxref=NCBI_GP:QIE16535.1;Name=QIE16535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503383.1;locus_tag=IXO1088_016335;product=siroheme synthase;protein_id=QIE16535.1;transl_table=11 CP040687.1 Genbank pseudogene 3389318 3389803 . + . ID=gene-IXO1088_016340;Name=IXO1088_016340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016340;pseudo=true CP040687.1 Protein Homology CDS 3389318 3389803 . + 0 ID=cds-IXO1088_016340;Parent=gene-IXO1088_016340;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304971.1;locus_tag=IXO1088_016340;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3389788 3389982 . + . ID=gene-IXO1088_016345;Name=IXO1088_016345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016345 CP040687.1 Protein Homology CDS 3389788 3389982 . + 0 ID=cds-QIE16536.1;Parent=gene-IXO1088_016345;Dbxref=NCBI_GP:QIE16536.1;Name=QIE16536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304970.1;locus_tag=IXO1088_016345;product=short-chain dehydrogenase;protein_id=QIE16536.1;transl_table=11 CP040687.1 Genbank pseudogene 3390070 3391142 . - . ID=gene-IXO1088_016350;Name=IXO1088_016350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016350;pseudo=true CP040687.1 Protein Homology CDS 3390070 3391142 . - 0 ID=cds-IXO1088_016350;Parent=gene-IXO1088_016350;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158288.1;locus_tag=IXO1088_016350;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3391376 3391738 . - . ID=gene-IXO1088_016355;Name=IXO1088_016355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016355 CP040687.1 Protein Homology CDS 3391376 3391738 . - 0 ID=cds-QIE16537.1;Parent=gene-IXO1088_016355;Dbxref=NCBI_GP:QIE16537.1;Name=QIE16537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158289.1;locus_tag=IXO1088_016355;product=hypothetical protein;protein_id=QIE16537.1;transl_table=11 CP040687.1 Genbank gene 3391722 3392291 . - . ID=gene-IXO1088_016360;Name=IXO1088_016360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016360 CP040687.1 Protein Homology CDS 3391722 3392291 . - 0 ID=cds-QIE16538.1;Parent=gene-IXO1088_016360;Dbxref=NCBI_GP:QIE16538.1;Name=QIE16538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575382.1;locus_tag=IXO1088_016360;product=molybdenum cofactor guanylyltransferase;protein_id=QIE16538.1;transl_table=11 CP040687.1 Genbank gene 3392329 3393582 . - . ID=gene-IXO1088_016365;Name=IXO1088_016365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016365 CP040687.1 Protein Homology CDS 3392329 3393582 . - 0 ID=cds-QIE16539.1;Parent=gene-IXO1088_016365;Dbxref=NCBI_GP:QIE16539.1;Name=QIE16539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503378.1;locus_tag=IXO1088_016365;product=molybdopterin molybdotransferase MoeA;protein_id=QIE16539.1;transl_table=11 CP040687.1 Genbank gene 3393788 3394165 . + . ID=gene-IXO1088_016370;Name=IXO1088_016370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016370 CP040687.1 Protein Homology CDS 3393788 3394165 . + 0 ID=cds-QIE16540.1;Parent=gene-IXO1088_016370;Dbxref=NCBI_GP:QIE16540.1;Name=QIE16540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503376.1;locus_tag=IXO1088_016370;product=hypothetical protein;protein_id=QIE16540.1;transl_table=11 CP040687.1 Genbank pseudogene 3394104 3394493 . - . ID=gene-IXO1088_016375;Name=IXO1088_016375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016375;pseudo=true CP040687.1 Protein Homology CDS 3394104 3394493 . - 0 ID=cds-IXO1088_016375;Parent=gene-IXO1088_016375;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303320.1;locus_tag=IXO1088_016375;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3394723 3395481 . + . ID=gene-IXO1088_016380;Name=IXO1088_016380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016380;pseudo=true CP040687.1 Protein Homology CDS 3394723 3395481 . + 0 ID=cds-IXO1088_016380;Parent=gene-IXO1088_016380;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_016380;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3395545 3396513 . + . ID=gene-IXO1088_016385;Name=IXO1088_016385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016385 CP040687.1 Protein Homology CDS 3395545 3396513 . + 0 ID=cds-QIE16541.1;Parent=gene-IXO1088_016385;Dbxref=NCBI_GP:QIE16541.1;Name=QIE16541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_016385;product=IS5-like element ISXo1 family transposase;protein_id=QIE16541.1;transl_table=11 CP040687.1 Genbank pseudogene 3396726 3397301 . - . ID=gene-IXO1088_016390;Name=IXO1088_016390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016390;pseudo=true CP040687.1 Protein Homology CDS 3396726 3397301 . - 0 ID=cds-IXO1088_016390;Parent=gene-IXO1088_016390;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_016390;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3397345 3398143 . + . ID=gene-IXO1088_016395;Name=IXO1088_016395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016395 CP040687.1 Protein Homology CDS 3397345 3397616 . + 0 ID=cds-QIE16542.1;Parent=gene-IXO1088_016395;Dbxref=NCBI_GP:QIE16542.1;Name=QIE16542.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_016395;product=IS5 family transposase;protein_id=QIE16542.1;transl_table=11 CP040687.1 Protein Homology CDS 3397615 3398143 . + 1 ID=cds-QIE16542.1;Parent=gene-IXO1088_016395;Dbxref=NCBI_GP:QIE16542.1;Name=QIE16542.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_016395;product=IS5 family transposase;protein_id=QIE16542.1;transl_table=11 CP040687.1 Genbank gene 3398258 3400633 . - . ID=gene-IXO1088_016400;Name=IXO1088_016400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016400 CP040687.1 Protein Homology CDS 3398258 3400633 . - 0 ID=cds-QIE16543.1;Parent=gene-IXO1088_016400;Dbxref=NCBI_GP:QIE16543.1;Name=QIE16543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010378140.1;locus_tag=IXO1088_016400;product=glycoside hydrolase family 127 protein;protein_id=QIE16543.1;transl_table=11 CP040687.1 Genbank pseudogene 3400781 3402759 . - . ID=gene-IXO1088_016405;Name=IXO1088_016405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016405;pseudo=true CP040687.1 Protein Homology CDS 3400781 3402759 . - 0 ID=cds-IXO1088_016405;Parent=gene-IXO1088_016405;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637749.1;locus_tag=IXO1088_016405;product=TonB-dependent receptor;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3402743 3402880 . - . ID=gene-IXO1088_016410;Name=IXO1088_016410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016410;pseudo=true CP040687.1 Protein Homology CDS 3402743 3402880 . - 0 ID=cds-IXO1088_016410;Parent=gene-IXO1088_016410;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408523.1;locus_tag=IXO1088_016410;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3402844 3404028 . + . ID=gene-IXO1088_016415;Name=IXO1088_016415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016415;pseudo=true CP040687.1 Protein Homology CDS 3402844 3404028 . + 0 ID=cds-IXO1088_016415;Parent=gene-IXO1088_016415;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086557964.1;locus_tag=IXO1088_016415;product=IS256 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3404062 3404985 . - . ID=gene-IXO1088_016420;Name=IXO1088_016420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016420;pseudo=true CP040687.1 Protein Homology CDS 3404062 3404985 . - 0 ID=cds-IXO1088_016420;Parent=gene-IXO1088_016420;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850071.1;locus_tag=IXO1088_016420;product=TonB-dependent receptor;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3405230 3405442 . - . ID=gene-IXO1088_016425;Name=IXO1088_016425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016425 CP040687.1 Protein Homology CDS 3405230 3405442 . - 0 ID=cds-QIE16544.1;Parent=gene-IXO1088_016425;Dbxref=NCBI_GP:QIE16544.1;Name=QIE16544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363400.1;locus_tag=IXO1088_016425;product=hypothetical protein;protein_id=QIE16544.1;transl_table=11 CP040687.1 Genbank gene 3405482 3407827 . - . ID=gene-IXO1088_016430;Name=IXO1088_016430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016430 CP040687.1 Protein Homology CDS 3405482 3407827 . - 0 ID=cds-QIE16545.1;Parent=gene-IXO1088_016430;Dbxref=NCBI_GP:QIE16545.1;Name=QIE16545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259647.1;locus_tag=IXO1088_016430;product=S9 family peptidase;protein_id=QIE16545.1;transl_table=11 CP040687.1 Genbank gene 3408149 3409735 . - . ID=gene-IXO1088_016435;Name=IXO1088_016435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016435 CP040687.1 Protein Homology CDS 3408149 3409735 . - 0 ID=cds-QIE16546.1;Parent=gene-IXO1088_016435;Dbxref=NCBI_GP:QIE16546.1;Name=QIE16546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920354.1;locus_tag=IXO1088_016435;product=glycosyl hydrolase family 43;protein_id=QIE16546.1;transl_table=11 CP040687.1 Genbank gene 3409732 3414096 . - . ID=gene-IXO1088_016440;Name=IXO1088_016440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016440 CP040687.1 Protein Homology CDS 3409732 3414096 . - 0 ID=cds-QIE16547.1;Parent=gene-IXO1088_016440;Dbxref=NCBI_GP:QIE16547.1;Name=QIE16547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154735.1;locus_tag=IXO1088_016440;product=carbohydrate-binding protein;protein_id=QIE16547.1;transl_table=11 CP040687.1 Genbank gene 3414335 3417172 . - . ID=gene-IXO1088_016445;Name=IXO1088_016445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016445 CP040687.1 Protein Homology CDS 3414335 3417172 . - 0 ID=cds-QIE16548.1;Parent=gene-IXO1088_016445;Dbxref=NCBI_GP:QIE16548.1;Name=QIE16548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637754.1;locus_tag=IXO1088_016445;product=TonB-dependent receptor;protein_id=QIE16548.1;transl_table=11 CP040687.1 Genbank gene 3417673 3420030 . - . ID=gene-IXO1088_016450;Name=IXO1088_016450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016450 CP040687.1 Protein Homology CDS 3417673 3420030 . - 0 ID=cds-QIE16549.1;Parent=gene-IXO1088_016450;Dbxref=NCBI_GP:QIE16549.1;Name=QIE16549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810936.1;locus_tag=IXO1088_016450;product=Tat pathway signal protein;protein_id=QIE16549.1;transl_table=11 CP040687.1 Genbank gene 3420494 3422065 . + . ID=gene-IXO1088_016455;Name=IXO1088_016455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016455 CP040687.1 Protein Homology CDS 3420494 3422065 . + 0 ID=cds-QIE16550.1;Parent=gene-IXO1088_016455;Dbxref=NCBI_GP:QIE16550.1;Name=QIE16550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171569.1;locus_tag=IXO1088_016455;product=peptidase S53;protein_id=QIE16550.1;transl_table=11 CP040687.1 Genbank gene 3422273 3422569 . - . ID=gene-IXO1088_016460;Name=IXO1088_016460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016460 CP040687.1 Protein Homology CDS 3422273 3422569 . - 0 ID=cds-QIE16551.1;Parent=gene-IXO1088_016460;Dbxref=NCBI_GP:QIE16551.1;Name=QIE16551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010378174.1;locus_tag=IXO1088_016460;product=hypothetical protein;protein_id=QIE16551.1;transl_table=11 CP040687.1 Genbank gene 3422566 3422910 . - . ID=gene-IXO1088_016465;Name=IXO1088_016465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016465 CP040687.1 GeneMarkS-2+ CDS 3422566 3422910 . - 0 ID=cds-QIE16552.1;Parent=gene-IXO1088_016465;Dbxref=NCBI_GP:QIE16552.1;Name=QIE16552.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_016465;product=hypothetical protein;protein_id=QIE16552.1;transl_table=11 CP040687.1 Genbank pseudogene 3422914 3423505 . - . ID=gene-IXO1088_016470;Name=IXO1088_016470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016470;pseudo=true CP040687.1 Protein Homology CDS 3422914 3423505 . - 0 ID=cds-IXO1088_016470;Parent=gene-IXO1088_016470;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259654.1;locus_tag=IXO1088_016470;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3423481 3423756 . - . ID=gene-IXO1088_016475;Name=IXO1088_016475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016475 CP040687.1 GeneMarkS-2+ CDS 3423481 3423756 . - 0 ID=cds-QIE16553.1;Parent=gene-IXO1088_016475;Dbxref=NCBI_GP:QIE16553.1;Name=QIE16553.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_016475;product=hypothetical protein;protein_id=QIE16553.1;transl_table=11 CP040687.1 Genbank gene 3423753 3423968 . - . ID=gene-IXO1088_016480;Name=IXO1088_016480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016480 CP040687.1 Protein Homology CDS 3423753 3423968 . - 0 ID=cds-QIE18039.1;Parent=gene-IXO1088_016480;Dbxref=NCBI_GP:QIE18039.1;Name=QIE18039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502899.1;locus_tag=IXO1088_016480;product=hypothetical protein;protein_id=QIE18039.1;transl_table=11 CP040687.1 Genbank gene 3424011 3424298 . - . ID=gene-IXO1088_016485;Name=IXO1088_016485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016485 CP040687.1 Protein Homology CDS 3424011 3424298 . - 0 ID=cds-QIE16554.1;Parent=gene-IXO1088_016485;Dbxref=NCBI_GP:QIE16554.1;Name=QIE16554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502898.1;locus_tag=IXO1088_016485;product=hypothetical protein;protein_id=QIE16554.1;transl_table=11 CP040687.1 Genbank gene 3424295 3426634 . - . ID=gene-IXO1088_016490;Name=IXO1088_016490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016490 CP040687.1 Protein Homology CDS 3424295 3426634 . - 0 ID=cds-QIE16555.1;Parent=gene-IXO1088_016490;Dbxref=NCBI_GP:QIE16555.1;Name=QIE16555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154742.1;locus_tag=IXO1088_016490;product=S9 family peptidase;protein_id=QIE16555.1;transl_table=11 CP040687.1 Genbank gene 3426624 3428210 . - . ID=gene-IXO1088_016495;Name=IXO1088_016495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016495 CP040687.1 Protein Homology CDS 3426624 3428210 . - 0 ID=cds-QIE16556.1;Parent=gene-IXO1088_016495;Dbxref=NCBI_GP:QIE16556.1;Name=QIE16556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637760.1;locus_tag=IXO1088_016495;product=amino acid permease;protein_id=QIE16556.1;transl_table=11 CP040687.1 Genbank gene 3428273 3430138 . - . ID=gene-IXO1088_016500;Name=IXO1088_016500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016500 CP040687.1 Protein Homology CDS 3428273 3430138 . - 0 ID=cds-QIE16557.1;Parent=gene-IXO1088_016500;Dbxref=NCBI_GP:QIE16557.1;Name=QIE16557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445433.1;locus_tag=IXO1088_016500;product=DUF885 family protein;protein_id=QIE16557.1;transl_table=11 CP040687.1 Genbank gene 3430135 3431967 . - . ID=gene-IXO1088_016505;Name=IXO1088_016505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016505 CP040687.1 Protein Homology CDS 3430135 3431967 . - 0 ID=cds-QIE16558.1;Parent=gene-IXO1088_016505;Dbxref=NCBI_GP:QIE16558.1;Name=QIE16558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159284.1;locus_tag=IXO1088_016505;product=DUF885 family protein;protein_id=QIE16558.1;transl_table=11 CP040687.1 Genbank gene 3432087 3433286 . - . ID=gene-IXO1088_016510;Name=IXO1088_016510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016510 CP040687.1 Protein Homology CDS 3432087 3433286 . - 0 ID=cds-QIE16559.1;Parent=gene-IXO1088_016510;Dbxref=NCBI_GP:QIE16559.1;Name=QIE16559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637763.1;locus_tag=IXO1088_016510;product=aminopeptidase P family protein;protein_id=QIE16559.1;transl_table=11 CP040687.1 Genbank gene 3433283 3434899 . - . ID=gene-IXO1088_016515;Name=IXO1088_016515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016515 CP040687.1 Protein Homology CDS 3433283 3434899 . - 0 ID=cds-QIE16560.1;Parent=gene-IXO1088_016515;Dbxref=NCBI_GP:QIE16560.1;Name=QIE16560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017173723.1;locus_tag=IXO1088_016515;product=aldehyde dehydrogenase family protein;protein_id=QIE16560.1;transl_table=11 CP040687.1 Genbank gene 3435110 3436018 . - . ID=gene-IXO1088_016520;Name=IXO1088_016520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016520 CP040687.1 Protein Homology CDS 3435110 3436018 . - 0 ID=cds-QIE16561.1;Parent=gene-IXO1088_016520;Dbxref=NCBI_GP:QIE16561.1;Name=QIE16561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451841.1;locus_tag=IXO1088_016520;product=dihydrodipicolinate synthase family protein;protein_id=QIE16561.1;transl_table=11 CP040687.1 Genbank gene 3436015 3437349 . - . ID=gene-IXO1088_016525;Name=IXO1088_016525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016525 CP040687.1 Protein Homology CDS 3436015 3437349 . - 0 ID=cds-QIE16562.1;Parent=gene-IXO1088_016525;Dbxref=NCBI_GP:QIE16562.1;Name=QIE16562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637766.1;locus_tag=IXO1088_016525;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=QIE16562.1;transl_table=11 CP040687.1 Genbank gene 3437321 3437566 . - . ID=gene-IXO1088_016530;Name=IXO1088_016530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016530 CP040687.1 Protein Homology CDS 3437321 3437566 . - 0 ID=cds-QIE16563.1;Parent=gene-IXO1088_016530;Dbxref=NCBI_GP:QIE16563.1;Name=QIE16563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637767.1;locus_tag=IXO1088_016530;product=(2Fe-2S)-binding protein;protein_id=QIE16563.1;transl_table=11 CP040687.1 Genbank gene 3437563 3438825 . - . ID=gene-IXO1088_016535;Name=IXO1088_016535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016535 CP040687.1 Protein Homology CDS 3437563 3438825 . - 0 ID=cds-QIE16564.1;Parent=gene-IXO1088_016535;Dbxref=NCBI_GP:QIE16564.1;Name=QIE16564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363454.1;locus_tag=IXO1088_016535;product=FAD-binding oxidoreductase;protein_id=QIE16564.1;transl_table=11 CP040687.1 Genbank gene 3438825 3439763 . - . ID=gene-IXO1088_016540;Name=IXO1088_016540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016540 CP040687.1 Protein Homology CDS 3438825 3439763 . - 0 ID=cds-QIE16565.1;Parent=gene-IXO1088_016540;Dbxref=NCBI_GP:QIE16565.1;Name=QIE16565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637769.1;locus_tag=IXO1088_016540;product=hydroxyproline-2-epimerase;protein_id=QIE16565.1;transl_table=11 CP040687.1 Genbank gene 3439921 3440637 . + . ID=gene-IXO1088_016545;Name=IXO1088_016545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016545 CP040687.1 Protein Homology CDS 3439921 3440637 . + 0 ID=cds-QIE16566.1;Parent=gene-IXO1088_016545;Dbxref=NCBI_GP:QIE16566.1;Name=QIE16566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637770.1;locus_tag=IXO1088_016545;product=AraC family transcriptional regulator;protein_id=QIE16566.1;transl_table=11 CP040687.1 Genbank gene 3440842 3442458 . + . ID=gene-IXO1088_016550;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=IXO1088_016550 CP040687.1 Protein Homology CDS 3440842 3442458 . + 0 ID=cds-QIE16567.1;Parent=gene-IXO1088_016550;Dbxref=NCBI_GP:QIE16567.1;Name=QIE16567.1;gbkey=CDS;gene=ftsY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116449.1;locus_tag=IXO1088_016550;product=signal recognition particle-docking protein FtsY;protein_id=QIE16567.1;transl_table=11 CP040687.1 Genbank pseudogene 3442480 3442714 . + . ID=gene-IXO1088_016555;Name=IXO1088_016555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016555;pseudo=true CP040687.1 Protein Homology CDS 3442480 3442714 . + 0 ID=cds-IXO1088_016555;Parent=gene-IXO1088_016555;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902006.1;locus_tag=IXO1088_016555;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3442837 3442913 . + . ID=gene-IXO1088_016560;Name=IXO1088_016560;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_016560 CP040687.1 cmsearch ncRNA 3442837 3442913 . + . ID=rna-IXO1088_016560;Parent=gene-IXO1088_016560;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_016560;product=sX9 sRNA CP040687.1 cmsearch exon 3442837 3442913 . + . ID=exon-IXO1088_016560-1;Parent=rna-IXO1088_016560;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_016560;product=sX9 sRNA CP040687.1 Genbank gene 3442937 3444010 . + . ID=gene-IXO1088_016565;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=IXO1088_016565 CP040687.1 Protein Homology CDS 3442937 3444010 . + 0 ID=cds-QIE16568.1;Parent=gene-IXO1088_016565;Dbxref=NCBI_GP:QIE16568.1;Name=QIE16568.1;gbkey=CDS;gene=mutY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157085.1;locus_tag=IXO1088_016565;product=A/G-specific adenine glycosylase;protein_id=QIE16568.1;transl_table=11 CP040687.1 Genbank gene 3444034 3444312 . + . ID=gene-IXO1088_016570;Name=IXO1088_016570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016570 CP040687.1 Protein Homology CDS 3444034 3444312 . + 0 ID=cds-QIE16569.1;Parent=gene-IXO1088_016570;Dbxref=NCBI_GP:QIE16569.1;Name=QIE16569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637773.1;locus_tag=IXO1088_016570;product=oxidative damage protection protein;protein_id=QIE16569.1;transl_table=11 CP040687.1 Genbank gene 3444677 3446299 . - . ID=gene-IXO1088_016575;Name=IXO1088_016575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016575 CP040687.1 Protein Homology CDS 3444677 3446299 . - 0 ID=cds-QIE16570.1;Parent=gene-IXO1088_016575;Dbxref=NCBI_GP:QIE16570.1;Name=QIE16570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637775.1;locus_tag=IXO1088_016575;product=PAS domain-containing protein;protein_id=QIE16570.1;transl_table=11 CP040687.1 Genbank pseudogene 3446997 3447149 . + . ID=gene-IXO1088_016580;Name=IXO1088_016580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016580;pseudo=true CP040687.1 Protein Homology CDS 3446997 3447149 . + 0 ID=cds-IXO1088_016580;Parent=gene-IXO1088_016580;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637777.1;locus_tag=IXO1088_016580;product=SAM-dependent methyltransferase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3447261 3448637 . + . ID=gene-IXO1088_016585;Name=IXO1088_016585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016585 CP040687.1 Protein Homology CDS 3447261 3448637 . + 0 ID=cds-QIE18040.1;Parent=gene-IXO1088_016585;Dbxref=NCBI_GP:QIE18040.1;Name=QIE18040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1088_016585;product=IS5 family transposase;protein_id=QIE18040.1;transl_table=11 CP040687.1 Genbank pseudogene 3448657 3449189 . + . ID=gene-IXO1088_016590;Name=IXO1088_016590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016590;pseudo=true CP040687.1 Protein Homology CDS 3448657 3449189 . + 0 ID=cds-IXO1088_016590;Parent=gene-IXO1088_016590;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448487.1;locus_tag=IXO1088_016590;product=methyltransferase domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3449206 3449715 . - . ID=gene-IXO1088_016595;Name=IXO1088_016595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016595 CP040687.1 Protein Homology CDS 3449206 3449715 . - 0 ID=cds-QIE16571.1;Parent=gene-IXO1088_016595;Dbxref=NCBI_GP:QIE16571.1;Name=QIE16571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019299957.1;locus_tag=IXO1088_016595;product=hypothetical protein;protein_id=QIE16571.1;transl_table=11 CP040687.1 Genbank gene 3450144 3450386 . - . ID=gene-IXO1088_016600;Name=IXO1088_016600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016600 CP040687.1 Protein Homology CDS 3450144 3450386 . - 0 ID=cds-QIE16572.1;Parent=gene-IXO1088_016600;Dbxref=NCBI_GP:QIE16572.1;Name=QIE16572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409025.1;locus_tag=IXO1088_016600;product=hypothetical protein;protein_id=QIE16572.1;transl_table=11 CP040687.1 Genbank pseudogene 3450852 3451040 . + . ID=gene-IXO1088_016605;Name=IXO1088_016605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016605;pseudo=true CP040687.1 Protein Homology CDS 3450852 3451040 . + 0 ID=cds-IXO1088_016605;Parent=gene-IXO1088_016605;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012080596.1;locus_tag=IXO1088_016605;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3451074 3451322 . + . ID=gene-IXO1088_016610;Name=IXO1088_016610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016610 CP040687.1 Protein Homology CDS 3451074 3451322 . + 0 ID=cds-QIE18041.1;Parent=gene-IXO1088_016610;Dbxref=NCBI_GP:QIE18041.1;Name=QIE18041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409026.1;locus_tag=IXO1088_016610;product=hypothetical protein;protein_id=QIE18041.1;transl_table=11 CP040687.1 Genbank gene 3451402 3452325 . - . ID=gene-IXO1088_016615;Name=IXO1088_016615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016615 CP040687.1 Protein Homology CDS 3451402 3452325 . - 0 ID=cds-QIE16573.1;Parent=gene-IXO1088_016615;Dbxref=NCBI_GP:QIE16573.1;Name=QIE16573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259680.1;locus_tag=IXO1088_016615;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=QIE16573.1;transl_table=11 CP040687.1 Genbank gene 3452322 3452921 . - . ID=gene-IXO1088_016620;Name=IXO1088_016620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016620 CP040687.1 Protein Homology CDS 3452322 3452921 . - 0 ID=cds-QIE16574.1;Parent=gene-IXO1088_016620;Dbxref=NCBI_GP:QIE16574.1;Name=QIE16574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409027.1;locus_tag=IXO1088_016620;product=transcriptional regulator;protein_id=QIE16574.1;transl_table=11 CP040687.1 Genbank pseudogene 3453013 3453288 . - . ID=gene-IXO1088_016625;Name=IXO1088_016625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016625;pseudo=true CP040687.1 Protein Homology CDS 3453013 3453288 . - 0 ID=cds-IXO1088_016625;Parent=gene-IXO1088_016625;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011112970.1;locus_tag=IXO1088_016625;product=DUF3223 domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3453256 3453576 . + . ID=gene-IXO1088_016630;Name=IXO1088_016630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016630 CP040687.1 Protein Homology CDS 3453256 3453576 . + 0 ID=cds-QIE16575.1;Parent=gene-IXO1088_016630;Dbxref=NCBI_GP:QIE16575.1;Name=QIE16575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409028.1;locus_tag=IXO1088_016630;product=hypothetical protein;protein_id=QIE16575.1;transl_table=11 CP040687.1 Genbank gene 3453608 3454096 . + . ID=gene-IXO1088_016635;Name=IXO1088_016635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016635 CP040687.1 Protein Homology CDS 3453608 3454096 . + 0 ID=cds-QIE16576.1;Parent=gene-IXO1088_016635;Dbxref=NCBI_GP:QIE16576.1;Name=QIE16576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017462913.1;locus_tag=IXO1088_016635;product=BrxE family protein;protein_id=QIE16576.1;transl_table=11 CP040687.1 Genbank gene 3454083 3454881 . - . ID=gene-IXO1088_016640;Name=IXO1088_016640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016640 CP040687.1 Protein Homology CDS 3454610 3454881 . - 0 ID=cds-QIE16577.1;Parent=gene-IXO1088_016640;Dbxref=NCBI_GP:QIE16577.1;Name=QIE16577.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_016640;product=IS5 family transposase;protein_id=QIE16577.1;transl_table=11 CP040687.1 Protein Homology CDS 3454083 3454611 . - 1 ID=cds-QIE16577.1;Parent=gene-IXO1088_016640;Dbxref=NCBI_GP:QIE16577.1;Name=QIE16577.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_016640;product=IS5 family transposase;protein_id=QIE16577.1;transl_table=11 CP040687.1 Genbank pseudogene 3454922 3455035 . + . ID=gene-IXO1088_016645;Name=IXO1088_016645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016645;pseudo=true CP040687.1 Protein Homology CDS 3454922 3455035 . + 0 ID=cds-IXO1088_016645;Parent=gene-IXO1088_016645;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409029.1;locus_tag=IXO1088_016645;product=BrxE family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3455024 3456050 . - . ID=gene-IXO1088_016650;Name=IXO1088_016650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016650 CP040687.1 Protein Homology CDS 3455169 3456050 . - 0 ID=cds-QIE16578.1;Parent=gene-IXO1088_016650;Dbxref=NCBI_GP:QIE16578.1;Name=QIE16578.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444376.1;locus_tag=IXO1088_016650;product=IS630 family transposase;protein_id=QIE16578.1;transl_table=11 CP040687.1 Protein Homology CDS 3455024 3455167 . - 0 ID=cds-QIE16578.1;Parent=gene-IXO1088_016650;Dbxref=NCBI_GP:QIE16578.1;Name=QIE16578.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444376.1;locus_tag=IXO1088_016650;product=IS630 family transposase;protein_id=QIE16578.1;transl_table=11 CP040687.1 Genbank pseudogene 3456100 3456839 . + . ID=gene-IXO1088_016655;Name=IXO1088_016655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016655;pseudo=true CP040687.1 Protein Homology CDS 3456100 3456839 . + 0 ID=cds-IXO1088_016655;Parent=gene-IXO1088_016655;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007159177.1;locus_tag=IXO1088_016655;product=DUF1819 family protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3456820 3457038 . + . ID=gene-IXO1088_016660;Name=IXO1088_016660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016660;pseudo=true CP040687.1 Protein Homology CDS 3456820 3457038 . + 0 ID=cds-IXO1088_016660;Parent=gene-IXO1088_016660;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013958182.1;locus_tag=IXO1088_016660;product=DUF1788 domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3457292 3457367 . - . ID=gene-IXO1088_016665;Name=IXO1088_016665;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_016665 CP040687.1 tRNAscan-SE tRNA 3457292 3457367 . - . ID=rna-IXO1088_016665;Parent=gene-IXO1088_016665;anticodon=(pos:complement(3457332..3457334));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_016665;product=tRNA-Phe CP040687.1 tRNAscan-SE exon 3457292 3457367 . - . ID=exon-IXO1088_016665-1;Parent=rna-IXO1088_016665;anticodon=(pos:complement(3457332..3457334));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_016665;product=tRNA-Phe CP040687.1 Genbank gene 3457564 3458100 . + . ID=gene-IXO1088_016670;Name=IXO1088_016670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016670 CP040687.1 Protein Homology CDS 3457564 3458100 . + 0 ID=cds-QIE16579.1;Parent=gene-IXO1088_016670;Dbxref=NCBI_GP:QIE16579.1;Name=QIE16579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502872.1;locus_tag=IXO1088_016670;product=lipocalin family protein;protein_id=QIE16579.1;transl_table=11 CP040687.1 Genbank pseudogene 3458179 3459837 . - . ID=gene-IXO1088_016675;Name=IXO1088_016675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016675;pseudo=true CP040687.1 Protein Homology CDS 3458179 3459837 . - 0 ID=cds-IXO1088_016675;Parent=gene-IXO1088_016675;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636837.2;locus_tag=IXO1088_016675;product=serine peptidase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3459973 3460369 . + . ID=gene-IXO1088_016680;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=IXO1088_016680 CP040687.1 cmsearch tmRNA 3459973 3460369 . + . ID=rna-IXO1088_016680;Parent=gene-IXO1088_016680;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_016680;product=transfer-messenger RNA CP040687.1 cmsearch exon 3459973 3460369 . + . ID=exon-IXO1088_016680-1;Parent=rna-IXO1088_016680;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_016680;product=transfer-messenger RNA CP040687.1 Genbank gene 3460891 3461973 . + . ID=gene-IXO1088_016685;Name=IXO1088_016685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016685 CP040687.1 Protein Homology CDS 3460891 3461973 . + 0 ID=cds-QIE16580.1;Parent=gene-IXO1088_016685;Dbxref=NCBI_GP:QIE16580.1;Name=QIE16580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445627.1;locus_tag=IXO1088_016685;product=IS630 family transposase;protein_id=QIE16580.1;transl_table=11 CP040687.1 Genbank gene 3462091 3463071 . - . ID=gene-IXO1088_016690;Name=IXO1088_016690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016690 CP040687.1 Protein Homology CDS 3462091 3463071 . - 0 ID=cds-QIE16581.1;Parent=gene-IXO1088_016690;Dbxref=NCBI_GP:QIE16581.1;Name=QIE16581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259689.1;locus_tag=IXO1088_016690;product=TraB/GumN family protein;protein_id=QIE16581.1;transl_table=11 CP040687.1 Genbank gene 3463181 3463642 . - . ID=gene-IXO1088_016695;Name=IXO1088_016695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016695 CP040687.1 Protein Homology CDS 3463181 3463642 . - 0 ID=cds-QIE16582.1;Parent=gene-IXO1088_016695;Dbxref=NCBI_GP:QIE16582.1;Name=QIE16582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502866.1;locus_tag=IXO1088_016695;product=cupin domain-containing protein;protein_id=QIE16582.1;transl_table=11 CP040687.1 Genbank gene 3463677 3464468 . - . ID=gene-IXO1088_016700;Name=IXO1088_016700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016700 CP040687.1 Protein Homology CDS 3463677 3464468 . - 0 ID=cds-QIE18042.1;Parent=gene-IXO1088_016700;Dbxref=NCBI_GP:QIE18042.1;Name=QIE18042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974711.1;locus_tag=IXO1088_016700;product=WecB/TagA/CpsF family glycosyltransferase;protein_id=QIE18042.1;transl_table=11 CP040687.1 Genbank gene 3464476 3465270 . - . ID=gene-IXO1088_016705;Name=IXO1088_016705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016705 CP040687.1 Protein Homology CDS 3464476 3465270 . - 0 ID=cds-QIE16583.1;Parent=gene-IXO1088_016705;Dbxref=NCBI_GP:QIE16583.1;Name=QIE16583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637797.1;locus_tag=IXO1088_016705;product=polysaccharide pyruvyl transferase family protein;protein_id=QIE16583.1;transl_table=11 CP040687.1 Genbank gene 3465307 3466503 . - . ID=gene-IXO1088_016710;Name=IXO1088_016710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016710 CP040687.1 Protein Homology CDS 3465307 3466503 . - 0 ID=cds-QIE16584.1;Parent=gene-IXO1088_016710;Dbxref=NCBI_GP:QIE16584.1;Name=QIE16584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637798.2;locus_tag=IXO1088_016710;product=glycosyltransferase;protein_id=QIE16584.1;transl_table=11 CP040687.1 Genbank gene 3466568 3468061 . - . ID=gene-IXO1088_016715;Name=IXO1088_016715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016715 CP040687.1 Protein Homology CDS 3466568 3468061 . - 0 ID=cds-QIE16585.1;Parent=gene-IXO1088_016715;Dbxref=NCBI_GP:QIE16585.1;Name=QIE16585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157109.1;locus_tag=IXO1088_016715;product=lipopolysaccharide biosynthesis protein;protein_id=QIE16585.1;transl_table=11 CP040687.1 Genbank gene 3468079 3469128 . - . ID=gene-IXO1088_016720;Name=IXO1088_016720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016720 CP040687.1 Protein Homology CDS 3468079 3469128 . - 0 ID=cds-QIE16586.1;Parent=gene-IXO1088_016720;Dbxref=NCBI_GP:QIE16586.1;Name=QIE16586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637800.1;locus_tag=IXO1088_016720;product=glycosyltransferase;protein_id=QIE16586.1;transl_table=11 CP040687.1 Genbank gene 3469125 3470267 . - . ID=gene-IXO1088_016725;Name=IXO1088_016725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016725 CP040687.1 Protein Homology CDS 3469125 3470267 . - 0 ID=cds-QIE16587.1;Parent=gene-IXO1088_016725;Dbxref=NCBI_GP:QIE16587.1;Name=QIE16587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637801.1;locus_tag=IXO1088_016725;product=GDP-mannose:cellobiosyl-diphosphopolyprenol alpha-mannosyltransferase;protein_id=QIE16587.1;transl_table=11 CP040687.1 Genbank gene 3470335 3471411 . - . ID=gene-IXO1088_016730;Name=IXO1088_016730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016730 CP040687.1 Protein Homology CDS 3470335 3471411 . - 0 ID=cds-QIE16588.1;Parent=gene-IXO1088_016730;Dbxref=NCBI_GP:QIE16588.1;Name=QIE16588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502860.1;locus_tag=IXO1088_016730;product=polysaccharide biosynthesis protein GumF;protein_id=QIE16588.1;transl_table=11 CP040687.1 Genbank gene 3471428 3472519 . - . ID=gene-IXO1088_016735;Name=IXO1088_016735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016735 CP040687.1 Protein Homology CDS 3471428 3472519 . - 0 ID=cds-QIE16589.1;Parent=gene-IXO1088_016735;Dbxref=NCBI_GP:QIE16589.1;Name=QIE16589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574566.1;locus_tag=IXO1088_016735;product=polysaccharide biosynthesis protein GumF;protein_id=QIE16589.1;transl_table=11 CP040687.1 Genbank gene 3472516 3473817 . - . ID=gene-IXO1088_016740;Name=IXO1088_016740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016740 CP040687.1 Protein Homology CDS 3472516 3473817 . - 0 ID=cds-QIE16590.1;Parent=gene-IXO1088_016740;Dbxref=NCBI_GP:QIE16590.1;Name=QIE16590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637804.1;locus_tag=IXO1088_016740;product=polysaccharide biosynthesis protein GumE;protein_id=QIE16590.1;transl_table=11 CP040687.1 Genbank gene 3473900 3475354 . - . ID=gene-IXO1088_016745;Name=IXO1088_016745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016745 CP040687.1 Protein Homology CDS 3473900 3475354 . - 0 ID=cds-QIE16591.1;Parent=gene-IXO1088_016745;Dbxref=NCBI_GP:QIE16591.1;Name=QIE16591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637805.1;locus_tag=IXO1088_016745;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=QIE16591.1;transl_table=11 CP040687.1 Genbank gene 3475598 3477037 . - . ID=gene-IXO1088_016750;Name=IXO1088_016750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016750 CP040687.1 Protein Homology CDS 3475598 3477037 . - 0 ID=cds-QIE16592.1;Parent=gene-IXO1088_016750;Dbxref=NCBI_GP:QIE16592.1;Name=QIE16592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157116.1;locus_tag=IXO1088_016750;product=polysaccharide biosynthesis protein GumC;protein_id=QIE16592.1;transl_table=11 CP040687.1 Genbank gene 3477019 3477660 . - . ID=gene-IXO1088_016755;Name=IXO1088_016755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016755 CP040687.1 Protein Homology CDS 3477019 3477660 . - 0 ID=cds-QIE18043.1;Parent=gene-IXO1088_016755;Dbxref=NCBI_GP:QIE18043.1;Name=QIE18043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637807.1;locus_tag=IXO1088_016755;product=polysaccharide export protein;protein_id=QIE18043.1;transl_table=11 CP040687.1 Genbank gene 3478189 3478265 . - . ID=gene-IXO1088_016760;Name=IXO1088_016760;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_016760 CP040687.1 tRNAscan-SE tRNA 3478189 3478265 . - . ID=rna-IXO1088_016760;Parent=gene-IXO1088_016760;anticodon=(pos:complement(3478229..3478231));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_016760;product=tRNA-Pro CP040687.1 tRNAscan-SE exon 3478189 3478265 . - . ID=exon-IXO1088_016760-1;Parent=rna-IXO1088_016760;anticodon=(pos:complement(3478229..3478231));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_016760;product=tRNA-Pro CP040687.1 Genbank gene 3478326 3478682 . - . ID=gene-IXO1088_016765;Name=IXO1088_016765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016765 CP040687.1 Protein Homology CDS 3478326 3478682 . - 0 ID=cds-QIE16593.1;Parent=gene-IXO1088_016765;Dbxref=NCBI_GP:QIE16593.1;Name=QIE16593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019182707.1;locus_tag=IXO1088_016765;product=MerR family transcriptional regulator;protein_id=QIE16593.1;transl_table=11 CP040687.1 Genbank gene 3478663 3478962 . - . ID=gene-IXO1088_016770;Name=IXO1088_016770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016770 CP040687.1 Protein Homology CDS 3478663 3478962 . - 0 ID=cds-QIE16594.1;Parent=gene-IXO1088_016770;Dbxref=NCBI_GP:QIE16594.1;Name=QIE16594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637809.1;locus_tag=IXO1088_016770;product=integration host factor subunit alpha;protein_id=QIE16594.1;transl_table=11 CP040687.1 Genbank gene 3478984 3481362 . - . ID=gene-IXO1088_016775;Name=IXO1088_016775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016775 CP040687.1 Protein Homology CDS 3478984 3481362 . - 0 ID=cds-QIE16595.1;Parent=gene-IXO1088_016775;Dbxref=NCBI_GP:QIE16595.1;Name=QIE16595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903311.1;locus_tag=IXO1088_016775;product=phenylalanine--tRNA ligase subunit beta;protein_id=QIE16595.1;transl_table=11 CP040687.1 Genbank gene 3481471 3482466 . - . ID=gene-IXO1088_016780;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=IXO1088_016780 CP040687.1 Protein Homology CDS 3481471 3482466 . - 0 ID=cds-QIE16596.1;Parent=gene-IXO1088_016780;Dbxref=NCBI_GP:QIE16596.1;Name=QIE16596.1;gbkey=CDS;gene=pheS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019299936.1;locus_tag=IXO1088_016780;product=phenylalanine--tRNA ligase subunit alpha;protein_id=QIE16596.1;transl_table=11 CP040687.1 Genbank gene 3482721 3483080 . - . ID=gene-IXO1088_016785;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=IXO1088_016785 CP040687.1 Protein Homology CDS 3482721 3483080 . - 0 ID=cds-QIE16597.1;Parent=gene-IXO1088_016785;Dbxref=NCBI_GP:QIE16597.1;Name=QIE16597.1;gbkey=CDS;gene=rplT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037598.1;locus_tag=IXO1088_016785;product=50S ribosomal protein L20;protein_id=QIE16597.1;transl_table=11 CP040687.1 Genbank gene 3483091 3483288 . - . ID=gene-IXO1088_016790;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=IXO1088_016790 CP040687.1 Protein Homology CDS 3483091 3483288 . - 0 ID=cds-QIE16598.1;Parent=gene-IXO1088_016790;Dbxref=NCBI_GP:QIE16598.1;Name=QIE16598.1;gbkey=CDS;gene=rpmI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005410436.1;locus_tag=IXO1088_016790;product=50S ribosomal protein L35;protein_id=QIE16598.1;transl_table=11 CP040687.1 Genbank gene 3483537 3484079 . - . ID=gene-IXO1088_016795;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=IXO1088_016795 CP040687.1 Protein Homology CDS 3483537 3484079 . - 0 ID=cds-QIE16599.1;Parent=gene-IXO1088_016795;Dbxref=NCBI_GP:QIE16599.1;Name=QIE16599.1;gbkey=CDS;gene=infC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660568.1;locus_tag=IXO1088_016795;product=translation initiation factor IF-3;protein_id=QIE16599.1;transl_table=11 CP040687.1 Genbank gene 3484128 3486032 . - . ID=gene-IXO1088_016800;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=IXO1088_016800 CP040687.1 Protein Homology CDS 3484128 3486032 . - 0 ID=cds-QIE16600.1;Parent=gene-IXO1088_016800;Dbxref=NCBI_GP:QIE16600.1;Name=QIE16600.1;gbkey=CDS;gene=thrS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017911219.1;locus_tag=IXO1088_016800;product=threonine--tRNA ligase;protein_id=QIE16600.1;transl_table=11 CP040687.1 Genbank pseudogene 3486348 3486538 . + . ID=gene-IXO1088_016805;Name=IXO1088_016805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016805;pseudo=true CP040687.1 Protein Homology CDS 3486348 3486538 . + 0 ID=cds-IXO1088_016805;Parent=gene-IXO1088_016805;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637816.1;locus_tag=IXO1088_016805;product=LacI family transcriptional regulator;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3486565 3486762 . - . ID=gene-IXO1088_016810;Name=IXO1088_016810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016810;pseudo=true CP040687.1 Protein Homology CDS 3486565 3486762 . - 0 ID=cds-IXO1088_016810;Parent=gene-IXO1088_016810;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004546695.1;locus_tag=IXO1088_016810;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3486835 3487716 . + . ID=gene-IXO1088_016815;Name=IXO1088_016815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016815;pseudo=true CP040687.1 Protein Homology CDS 3486835 3487716 . + 0 ID=cds-IXO1088_016815;Parent=gene-IXO1088_016815;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1088_016815;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3487713 3487934 . - . ID=gene-IXO1088_016820;Name=IXO1088_016820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016820 CP040687.1 Protein Homology CDS 3487713 3487934 . - 0 ID=cds-QIE16601.1;Parent=gene-IXO1088_016820;Dbxref=NCBI_GP:QIE16601.1;Name=QIE16601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011347842.1;locus_tag=IXO1088_016820;product=hypothetical protein;protein_id=QIE16601.1;transl_table=11 CP040687.1 Genbank gene 3488100 3489335 . + . ID=gene-IXO1088_016825;Name=IXO1088_016825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016825 CP040687.1 Protein Homology CDS 3488100 3489335 . + 0 ID=cds-QIE16602.1;Parent=gene-IXO1088_016825;Dbxref=NCBI_GP:QIE16602.1;Name=QIE16602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1088_016825;product=ISL3 family transposase;protein_id=QIE16602.1;transl_table=11 CP040687.1 Genbank gene 3489475 3489549 . - . ID=gene-IXO1088_016830;Name=IXO1088_016830;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_016830 CP040687.1 tRNAscan-SE tRNA 3489475 3489549 . - . ID=rna-IXO1088_016830;Parent=gene-IXO1088_016830;anticodon=(pos:complement(3489515..3489517));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_016830;product=tRNA-Val CP040687.1 tRNAscan-SE exon 3489475 3489549 . - . ID=exon-IXO1088_016830-1;Parent=rna-IXO1088_016830;anticodon=(pos:complement(3489515..3489517));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_016830;product=tRNA-Val CP040687.1 Genbank gene 3489645 3491666 . - . ID=gene-IXO1088_016835;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=IXO1088_016835 CP040687.1 Protein Homology CDS 3489645 3491666 . - 0 ID=cds-QIE16603.1;Parent=gene-IXO1088_016835;Dbxref=NCBI_GP:QIE16603.1;Name=QIE16603.1;gbkey=CDS;gene=uvrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637836.1;locus_tag=IXO1088_016835;product=excinuclease ABC subunit UvrB;protein_id=QIE16603.1;transl_table=11 CP040687.1 Genbank gene 3491805 3492347 . + . ID=gene-IXO1088_016840;Name=IXO1088_016840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016840 CP040687.1 Protein Homology CDS 3491805 3492347 . + 0 ID=cds-QIE16604.1;Parent=gene-IXO1088_016840;Dbxref=NCBI_GP:QIE16604.1;Name=QIE16604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371290.1;locus_tag=IXO1088_016840;product=prepilin-type cleavage/methylation domain-containing protein;protein_id=QIE16604.1;transl_table=11 CP040687.1 Genbank pseudogene 3492872 3493405 . - . ID=gene-IXO1088_016845;Name=IXO1088_016845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016845;pseudo=true CP040687.1 Protein Homology CDS 3492872 3493405 . - 0 ID=cds-IXO1088_016845;Parent=gene-IXO1088_016845;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002807750.1;locus_tag=IXO1088_016845;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3493432 3493731 . - . ID=gene-IXO1088_016850;Name=IXO1088_016850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016850 CP040687.1 Protein Homology CDS 3493432 3493731 . - 0 ID=cds-QIE18044.1;Parent=gene-IXO1088_016850;Dbxref=NCBI_GP:QIE18044.1;Name=QIE18044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445477.1;locus_tag=IXO1088_016850;product=hypothetical protein;protein_id=QIE18044.1;transl_table=11 CP040687.1 Genbank pseudogene 3494300 3495283 . - . ID=gene-IXO1088_016855;Name=IXO1088_016855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_016855;pseudo=true CP040687.1 Protein Homology CDS 3494300 3495283 . - 0 ID=cds-IXO1088_016855;Parent=gene-IXO1088_016855;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=IXO1088_016855;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3495357 3498191 . - . ID=gene-IXO1088_016860;Name=IXO1088_016860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016860 CP040687.1 Protein Homology CDS 3495357 3498191 . - 0 ID=cds-QIE16605.1;Parent=gene-IXO1088_016860;Dbxref=NCBI_GP:QIE16605.1;Name=QIE16605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445479.1;locus_tag=IXO1088_016860;product=hypothetical protein;protein_id=QIE16605.1;transl_table=11 CP040687.1 Genbank gene 3498188 3499114 . - . ID=gene-IXO1088_016865;Name=IXO1088_016865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016865 CP040687.1 Protein Homology CDS 3498188 3499114 . - 0 ID=cds-QIE16606.1;Parent=gene-IXO1088_016865;Dbxref=NCBI_GP:QIE16606.1;Name=QIE16606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445480.1;locus_tag=IXO1088_016865;product=DUF4123 domain-containing protein;protein_id=QIE16606.1;transl_table=11 CP040687.1 Genbank gene 3500169 3500570 . + . ID=gene-IXO1088_016870;Name=IXO1088_016870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016870 CP040687.1 Protein Homology CDS 3500169 3500570 . + 0 ID=cds-QIE18045.1;Parent=gene-IXO1088_016870;Dbxref=NCBI_GP:QIE18045.1;Name=QIE18045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409850.1;locus_tag=IXO1088_016870;product=PAAR domain-containing protein;protein_id=QIE18045.1;transl_table=11 CP040687.1 Genbank gene 3500567 3501076 . + . ID=gene-IXO1088_016875;Name=IXO1088_016875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016875 CP040687.1 Protein Homology CDS 3500567 3501076 . + 0 ID=cds-QIE16607.1;Parent=gene-IXO1088_016875;Dbxref=NCBI_GP:QIE16607.1;Name=QIE16607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260874.1;locus_tag=IXO1088_016875;product=DUF4123 domain-containing protein;protein_id=QIE16607.1;transl_table=11 CP040687.1 Genbank gene 3501057 3501398 . + . ID=gene-IXO1088_016880;Name=IXO1088_016880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016880 CP040687.1 Protein Homology CDS 3501057 3501398 . + 0 ID=cds-QIE16608.1;Parent=gene-IXO1088_016880;Dbxref=NCBI_GP:QIE16608.1;Name=QIE16608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408158.1;locus_tag=IXO1088_016880;product=hypothetical protein;protein_id=QIE16608.1;transl_table=11 CP040687.1 Genbank gene 3501412 3502122 . + . ID=gene-IXO1088_016885;Name=IXO1088_016885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016885 CP040687.1 Protein Homology CDS 3501412 3502122 . + 0 ID=cds-QIE16609.1;Parent=gene-IXO1088_016885;Dbxref=NCBI_GP:QIE16609.1;Name=QIE16609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408157.1;locus_tag=IXO1088_016885;product=hypothetical protein;protein_id=QIE16609.1;transl_table=11 CP040687.1 Genbank gene 3502130 3502891 . + . ID=gene-IXO1088_016890;Name=IXO1088_016890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016890 CP040687.1 Protein Homology CDS 3502130 3502891 . + 0 ID=cds-QIE16610.1;Parent=gene-IXO1088_016890;Dbxref=NCBI_GP:QIE16610.1;Name=QIE16610.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF15579.4;locus_tag=IXO1088_016890;product=hypothetical protein;protein_id=QIE16610.1;transl_table=11 CP040687.1 Genbank gene 3503319 3504020 . - . ID=gene-IXO1088_016895;Name=IXO1088_016895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016895 CP040687.1 Protein Homology CDS 3503319 3504020 . - 0 ID=cds-QIE16611.1;Parent=gene-IXO1088_016895;Dbxref=NCBI_GP:QIE16611.1;Name=QIE16611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408155.1;locus_tag=IXO1088_016895;product=site-specific DNA-methyltransferase;protein_id=QIE16611.1;transl_table=11 CP040687.1 Genbank gene 3503938 3504183 . - . ID=gene-IXO1088_016900;Name=IXO1088_016900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016900 CP040687.1 Protein Homology CDS 3503938 3504183 . - 0 ID=cds-QIE16612.1;Parent=gene-IXO1088_016900;Dbxref=NCBI_GP:QIE16612.1;Name=QIE16612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638316.1;locus_tag=IXO1088_016900;product=Com family DNA-binding transcriptional regulator;protein_id=QIE16612.1;transl_table=11 CP040687.1 Genbank gene 3504209 3505231 . - . ID=gene-IXO1088_016905;Name=IXO1088_016905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016905 CP040687.1 Protein Homology CDS 3504209 3505231 . - 0 ID=cds-QIE16613.1;Parent=gene-IXO1088_016905;Dbxref=NCBI_GP:QIE16613.1;Name=QIE16613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638317.1;locus_tag=IXO1088_016905;product=phage portal protein;protein_id=QIE16613.1;transl_table=11 CP040687.1 Genbank gene 3505231 3507015 . - . ID=gene-IXO1088_016910;Name=IXO1088_016910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016910 CP040687.1 Protein Homology CDS 3505231 3507015 . - 0 ID=cds-QIE16614.1;Parent=gene-IXO1088_016910;Dbxref=NCBI_GP:QIE16614.1;Name=QIE16614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638318.1;locus_tag=IXO1088_016910;product=terminase ATPase subunit family protein;protein_id=QIE16614.1;transl_table=11 CP040687.1 Genbank gene 3507137 3507979 . + . ID=gene-IXO1088_016915;Name=IXO1088_016915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016915 CP040687.1 Protein Homology CDS 3507137 3507979 . + 0 ID=cds-QIE16615.1;Parent=gene-IXO1088_016915;Dbxref=NCBI_GP:QIE16615.1;Name=QIE16615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638319.1;locus_tag=IXO1088_016915;product=GPO family capsid scaffolding protein;protein_id=QIE16615.1;transl_table=11 CP040687.1 Genbank gene 3508026 3509042 . + . ID=gene-IXO1088_016920;Name=IXO1088_016920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016920 CP040687.1 Protein Homology CDS 3508026 3509042 . + 0 ID=cds-QIE16616.1;Parent=gene-IXO1088_016920;Dbxref=NCBI_GP:QIE16616.1;Name=QIE16616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638320.1;locus_tag=IXO1088_016920;product=phage major capsid protein%2C P2 family;protein_id=QIE16616.1;transl_table=11 CP040687.1 Genbank gene 3509046 3509765 . + . ID=gene-IXO1088_016925;Name=IXO1088_016925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016925 CP040687.1 Protein Homology CDS 3509046 3509765 . + 0 ID=cds-QIE16617.1;Parent=gene-IXO1088_016925;Dbxref=NCBI_GP:QIE16617.1;Name=QIE16617.1;Note=gpM%3B M protein%3B capsid packaging%3B M protein is probably the endonuclease subunit of the terminase complex%2C which directs cos cleavage of closed monomeric dsDNA circles into linear genomes with 19 nt cohesive ssDNA ends%3B Q%2C P and M proteins are needed to package DNA into capsid proheads and conversion into mature capsids;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638321.1;locus_tag=IXO1088_016925;product=terminase;protein_id=QIE16617.1;transl_table=11 CP040687.1 Genbank gene 3509865 3510332 . + . ID=gene-IXO1088_016930;Name=IXO1088_016930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016930 CP040687.1 Protein Homology CDS 3509865 3510332 . + 0 ID=cds-QIE16618.1;Parent=gene-IXO1088_016930;Dbxref=NCBI_GP:QIE16618.1;Name=QIE16618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638322.1;locus_tag=IXO1088_016930;product=head completion/stabilization protein;protein_id=QIE16618.1;transl_table=11 CP040687.1 Genbank gene 3510332 3510541 . + . ID=gene-IXO1088_016935;Name=IXO1088_016935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016935 CP040687.1 Protein Homology CDS 3510332 3510541 . + 0 ID=cds-QIE16619.1;Parent=gene-IXO1088_016935;Dbxref=NCBI_GP:QIE16619.1;Name=QIE16619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638323.1;locus_tag=IXO1088_016935;product=phage tail protein;protein_id=QIE16619.1;transl_table=11 CP040687.1 Genbank gene 3510546 3510902 . + . ID=gene-IXO1088_016940;Name=IXO1088_016940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016940 CP040687.1 Protein Homology CDS 3510546 3510902 . + 0 ID=cds-QIE16620.1;Parent=gene-IXO1088_016940;Dbxref=NCBI_GP:QIE16620.1;Name=QIE16620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638324.1;locus_tag=IXO1088_016940;product=hypothetical protein;protein_id=QIE16620.1;transl_table=11 CP040687.1 Genbank gene 3510895 3511170 . + . ID=gene-IXO1088_016945;Name=IXO1088_016945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016945 CP040687.1 Protein Homology CDS 3510895 3511170 . + 0 ID=cds-QIE16621.1;Parent=gene-IXO1088_016945;Dbxref=NCBI_GP:QIE16621.1;Name=QIE16621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638325.1;locus_tag=IXO1088_016945;product=phage holin family protein;protein_id=QIE16621.1;transl_table=11 CP040687.1 Genbank gene 3511167 3511808 . + . ID=gene-IXO1088_016950;Name=IXO1088_016950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016950 CP040687.1 Protein Homology CDS 3511167 3511808 . + 0 ID=cds-QIE16622.1;Parent=gene-IXO1088_016950;Dbxref=NCBI_GP:QIE16622.1;Name=QIE16622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258470.1;locus_tag=IXO1088_016950;product=glycoside hydrolase family 19 protein;protein_id=QIE16622.1;transl_table=11 CP040687.1 Genbank gene 3511808 3512296 . + . ID=gene-IXO1088_016955;Name=IXO1088_016955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016955 CP040687.1 Protein Homology CDS 3511808 3512296 . + 0 ID=cds-QIE16623.1;Parent=gene-IXO1088_016955;Dbxref=NCBI_GP:QIE16623.1;Name=QIE16623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638327.1;locus_tag=IXO1088_016955;product=hypothetical protein;protein_id=QIE16623.1;transl_table=11 CP040687.1 Genbank gene 3512293 3512712 . + . ID=gene-IXO1088_016960;Name=IXO1088_016960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016960 CP040687.1 Protein Homology CDS 3512293 3512712 . + 0 ID=cds-QIE16624.1;Parent=gene-IXO1088_016960;Dbxref=NCBI_GP:QIE16624.1;Name=QIE16624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638328.1;locus_tag=IXO1088_016960;product=phage tail protein;protein_id=QIE16624.1;transl_table=11 CP040687.1 Genbank gene 3512700 3513149 . + . ID=gene-IXO1088_016965;Name=IXO1088_016965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016965 CP040687.1 Protein Homology CDS 3512700 3513149 . + 0 ID=cds-QIE16625.1;Parent=gene-IXO1088_016965;Dbxref=NCBI_GP:QIE16625.1;Name=QIE16625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851160.1;locus_tag=IXO1088_016965;product=phage virion morphogenesis protein;protein_id=QIE16625.1;transl_table=11 CP040687.1 Genbank gene 3513267 3515126 . + . ID=gene-IXO1088_016970;Name=IXO1088_016970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016970 CP040687.1 Protein Homology CDS 3513267 3515126 . + 0 ID=cds-QIE16626.1;Parent=gene-IXO1088_016970;Dbxref=NCBI_GP:QIE16626.1;Name=QIE16626.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00078.25;locus_tag=IXO1088_016970;product=RNA-directed DNA polymerase;protein_id=QIE16626.1;transl_table=11 CP040687.1 Genbank gene 3515500 3516390 . + . ID=gene-IXO1088_016975;Name=IXO1088_016975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016975 CP040687.1 Protein Homology CDS 3515500 3516390 . + 0 ID=cds-QIE16627.1;Parent=gene-IXO1088_016975;Dbxref=NCBI_GP:QIE16627.1;Name=QIE16627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638330.1;locus_tag=IXO1088_016975;product=baseplate assembly protein;protein_id=QIE16627.1;transl_table=11 CP040687.1 Genbank gene 3516383 3516928 . + . ID=gene-IXO1088_016980;Name=IXO1088_016980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016980 CP040687.1 Protein Homology CDS 3516383 3516928 . + 0 ID=cds-QIE16628.1;Parent=gene-IXO1088_016980;Dbxref=NCBI_GP:QIE16628.1;Name=QIE16628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118949.1;locus_tag=IXO1088_016980;product=phage tail protein I;protein_id=QIE16628.1;transl_table=11 CP040687.1 Genbank gene 3516938 3518443 . + . ID=gene-IXO1088_016985;Name=IXO1088_016985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016985 CP040687.1 Protein Homology CDS 3516938 3518443 . + 0 ID=cds-QIE16629.1;Parent=gene-IXO1088_016985;Dbxref=NCBI_GP:QIE16629.1;Name=QIE16629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408140.1;locus_tag=IXO1088_016985;product=tail fiber protein;protein_id=QIE16629.1;transl_table=11 CP040687.1 Genbank gene 3518451 3519029 . + . ID=gene-IXO1088_016990;Name=IXO1088_016990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016990 CP040687.1 Protein Homology CDS 3518451 3519029 . + 0 ID=cds-QIE16630.1;Parent=gene-IXO1088_016990;Dbxref=NCBI_GP:QIE16630.1;Name=QIE16630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408139.1;locus_tag=IXO1088_016990;product=phage tail protein;protein_id=QIE16630.1;transl_table=11 CP040687.1 Genbank gene 3519090 3519653 . + . ID=gene-IXO1088_016995;Name=IXO1088_016995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_016995 CP040687.1 Protein Homology CDS 3519090 3519653 . + 0 ID=cds-QIE16631.1;Parent=gene-IXO1088_016995;Dbxref=NCBI_GP:QIE16631.1;Name=QIE16631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638334.1;locus_tag=IXO1088_016995;product=phage baseplate assembly protein V;protein_id=QIE16631.1;transl_table=11 CP040687.1 Genbank gene 3519650 3520009 . + . ID=gene-IXO1088_017000;Name=IXO1088_017000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017000 CP040687.1 Protein Homology CDS 3519650 3520009 . + 0 ID=cds-QIE16632.1;Parent=gene-IXO1088_017000;Dbxref=NCBI_GP:QIE16632.1;Name=QIE16632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638335.1;locus_tag=IXO1088_017000;product=baseplate assembly protein;protein_id=QIE16632.1;transl_table=11 CP040687.1 Genbank gene 3520021 3521187 . + . ID=gene-IXO1088_017005;Name=IXO1088_017005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017005 CP040687.1 Protein Homology CDS 3520021 3521187 . + 0 ID=cds-QIE16633.1;Parent=gene-IXO1088_017005;Dbxref=NCBI_GP:QIE16633.1;Name=QIE16633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638336.1;locus_tag=IXO1088_017005;product=phage tail sheath protein;protein_id=QIE16633.1;transl_table=11 CP040687.1 Genbank gene 3521218 3521727 . + . ID=gene-IXO1088_017010;Name=IXO1088_017010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017010 CP040687.1 Protein Homology CDS 3521218 3521727 . + 0 ID=cds-QIE16634.1;Parent=gene-IXO1088_017010;Dbxref=NCBI_GP:QIE16634.1;Name=QIE16634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638337.1;locus_tag=IXO1088_017010;product=phage major tail tube protein;protein_id=QIE16634.1;transl_table=11 CP040687.1 Genbank gene 3521772 3522074 . + . ID=gene-IXO1088_017015;Name=IXO1088_017015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017015 CP040687.1 Protein Homology CDS 3521772 3522074 . + 0 ID=cds-QIE16635.1;Parent=gene-IXO1088_017015;Dbxref=NCBI_GP:QIE16635.1;Name=QIE16635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007962736.1;locus_tag=IXO1088_017015;product=phage tail assembly protein;protein_id=QIE16635.1;transl_table=11 CP040687.1 Genbank gene 3522083 3522196 . + . ID=gene-IXO1088_017020;Name=IXO1088_017020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017020 CP040687.1 Protein Homology CDS 3522083 3522196 . + 0 ID=cds-QIE16636.1;Parent=gene-IXO1088_017020;Dbxref=NCBI_GP:QIE16636.1;Name=QIE16636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638339.1;locus_tag=IXO1088_017020;product=GpE family phage tail protein;protein_id=QIE16636.1;transl_table=11 CP040687.1 Genbank gene 3522226 3525096 . + . ID=gene-IXO1088_017025;Name=IXO1088_017025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017025 CP040687.1 Protein Homology CDS 3522226 3525096 . + 0 ID=cds-QIE16637.1;Parent=gene-IXO1088_017025;Dbxref=NCBI_GP:QIE16637.1;Name=QIE16637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638340.1;locus_tag=IXO1088_017025;product=phage tail tape measure protein;protein_id=QIE16637.1;transl_table=11 CP040687.1 Genbank gene 3525109 3525510 . + . ID=gene-IXO1088_017030;Name=IXO1088_017030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017030 CP040687.1 Protein Homology CDS 3525109 3525510 . + 0 ID=cds-QIE16638.1;Parent=gene-IXO1088_017030;Dbxref=NCBI_GP:QIE16638.1;Name=QIE16638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118939.1;locus_tag=IXO1088_017030;product=phage tail protein;protein_id=QIE16638.1;transl_table=11 CP040687.1 Genbank gene 3525507 3526493 . + . ID=gene-IXO1088_017035;Name=IXO1088_017035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017035 CP040687.1 Protein Homology CDS 3525507 3526493 . + 0 ID=cds-QIE16639.1;Parent=gene-IXO1088_017035;Dbxref=NCBI_GP:QIE16639.1;Name=QIE16639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258453.1;locus_tag=IXO1088_017035;product=phage late control D family protein;protein_id=QIE16639.1;transl_table=11 CP040687.1 Genbank pseudogene 3526511 3526830 . - . ID=gene-IXO1088_017040;Name=IXO1088_017040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_017040;pseudo=true CP040687.1 Protein Homology CDS 3526511 3526830 . - 0 ID=cds-IXO1088_017040;Parent=gene-IXO1088_017040;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115433.1;locus_tag=IXO1088_017040;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3527101 3527532 . - . ID=gene-IXO1088_017045;Name=IXO1088_017045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017045 CP040687.1 Protein Homology CDS 3527101 3527532 . - 0 ID=cds-QIE16640.1;Parent=gene-IXO1088_017045;Dbxref=NCBI_GP:QIE16640.1;Name=QIE16640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364083.1;locus_tag=IXO1088_017045;product=transcriptional regulator;protein_id=QIE16640.1;transl_table=11 CP040687.1 Genbank gene 3527605 3527865 . + . ID=gene-IXO1088_017050;Name=IXO1088_017050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017050 CP040687.1 Protein Homology CDS 3527605 3527865 . + 0 ID=cds-QIE16641.1;Parent=gene-IXO1088_017050;Dbxref=NCBI_GP:QIE16641.1;Name=QIE16641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171492.1;locus_tag=IXO1088_017050;product=DNA-binding protein;protein_id=QIE16641.1;transl_table=11 CP040687.1 Genbank gene 3527868 3528185 . + . ID=gene-IXO1088_017055;Name=IXO1088_017055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017055 CP040687.1 Protein Homology CDS 3527868 3528185 . + 0 ID=cds-QIE18046.1;Parent=gene-IXO1088_017055;Dbxref=NCBI_GP:QIE18046.1;Name=QIE18046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572766.1;locus_tag=IXO1088_017055;product=hypothetical protein;protein_id=QIE18046.1;transl_table=11 CP040687.1 Genbank gene 3528198 3528476 . + . ID=gene-IXO1088_017060;Name=IXO1088_017060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017060 CP040687.1 Protein Homology CDS 3528198 3528476 . + 0 ID=cds-QIE16642.1;Parent=gene-IXO1088_017060;Dbxref=NCBI_GP:QIE16642.1;Name=QIE16642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167602.1;locus_tag=IXO1088_017060;product=hypothetical protein;protein_id=QIE16642.1;transl_table=11 CP040687.1 Genbank gene 3528473 3528685 . + . ID=gene-IXO1088_017065;Name=IXO1088_017065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017065 CP040687.1 Protein Homology CDS 3528473 3528685 . + 0 ID=cds-QIE16643.1;Parent=gene-IXO1088_017065;Dbxref=NCBI_GP:QIE16643.1;Name=QIE16643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364092.1;locus_tag=IXO1088_017065;product=hypothetical protein;protein_id=QIE16643.1;transl_table=11 CP040687.1 Genbank gene 3528718 3531378 . + . ID=gene-IXO1088_017070;Name=IXO1088_017070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017070 CP040687.1 Protein Homology CDS 3528718 3531378 . + 0 ID=cds-QIE18047.1;Parent=gene-IXO1088_017070;Dbxref=NCBI_GP:QIE18047.1;Name=QIE18047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638350.1;locus_tag=IXO1088_017070;product=bifunctional DNA primase/helicase;protein_id=QIE18047.1;transl_table=11 CP040687.1 Genbank gene 3531702 3531920 . + . ID=gene-IXO1088_017075;Name=IXO1088_017075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017075 CP040687.1 Protein Homology CDS 3531702 3531920 . + 0 ID=cds-QIE16644.1;Parent=gene-IXO1088_017075;Dbxref=NCBI_GP:QIE16644.1;Name=QIE16644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922222.1;locus_tag=IXO1088_017075;product=hypothetical protein;protein_id=QIE16644.1;transl_table=11 CP040687.1 Genbank gene 3531917 3532195 . + . ID=gene-IXO1088_017080;Name=IXO1088_017080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017080 CP040687.1 Protein Homology CDS 3531917 3532195 . + 0 ID=cds-QIE16645.1;Parent=gene-IXO1088_017080;Dbxref=NCBI_GP:QIE16645.1;Name=QIE16645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922224.1;locus_tag=IXO1088_017080;product=hypothetical protein;protein_id=QIE16645.1;transl_table=11 CP040687.1 Genbank gene 3532185 3532457 . + . ID=gene-IXO1088_017085;Name=IXO1088_017085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017085 CP040687.1 Protein Homology CDS 3532185 3532457 . + 0 ID=cds-QIE18048.1;Parent=gene-IXO1088_017085;Dbxref=NCBI_GP:QIE18048.1;Name=QIE18048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364102.1;locus_tag=IXO1088_017085;product=hypothetical protein;protein_id=QIE18048.1;transl_table=11 CP040687.1 Genbank gene 3532648 3532956 . + . ID=gene-IXO1088_017090;Name=IXO1088_017090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017090 CP040687.1 Protein Homology CDS 3532648 3532956 . + 0 ID=cds-QIE18049.1;Parent=gene-IXO1088_017090;Dbxref=NCBI_GP:QIE18049.1;Name=QIE18049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572780.1;locus_tag=IXO1088_017090;product=hypothetical protein;protein_id=QIE18049.1;transl_table=11 CP040687.1 Genbank gene 3532949 3533131 . + . ID=gene-IXO1088_017095;Name=IXO1088_017095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017095 CP040687.1 Protein Homology CDS 3532949 3533131 . + 0 ID=cds-QIE16646.1;Parent=gene-IXO1088_017095;Dbxref=NCBI_GP:QIE16646.1;Name=QIE16646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015471751.1;locus_tag=IXO1088_017095;product=hypothetical protein;protein_id=QIE16646.1;transl_table=11 CP040687.1 Genbank gene 3533124 3533396 . + . ID=gene-IXO1088_017100;Name=IXO1088_017100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017100 CP040687.1 Protein Homology CDS 3533124 3533396 . + 0 ID=cds-QIE16647.1;Parent=gene-IXO1088_017100;Dbxref=NCBI_GP:QIE16647.1;Name=QIE16647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572785.1;locus_tag=IXO1088_017100;product=hypothetical protein;protein_id=QIE16647.1;transl_table=11 CP040687.1 Genbank gene 3533393 3533617 . + . ID=gene-IXO1088_017105;Name=IXO1088_017105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017105 CP040687.1 Protein Homology CDS 3533393 3533617 . + 0 ID=cds-QIE16648.1;Parent=gene-IXO1088_017105;Dbxref=NCBI_GP:QIE16648.1;Name=QIE16648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091205.1;locus_tag=IXO1088_017105;product=hypothetical protein;protein_id=QIE16648.1;transl_table=11 CP040687.1 Genbank gene 3533614 3533886 . + . ID=gene-IXO1088_017110;Name=IXO1088_017110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017110 CP040687.1 Protein Homology CDS 3533614 3533886 . + 0 ID=cds-QIE16649.1;Parent=gene-IXO1088_017110;Dbxref=NCBI_GP:QIE16649.1;Name=QIE16649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463373.1;locus_tag=IXO1088_017110;product=hypothetical protein;protein_id=QIE16649.1;transl_table=11 CP040687.1 Genbank gene 3533883 3534092 . + . ID=gene-IXO1088_017115;Name=IXO1088_017115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017115 CP040687.1 Protein Homology CDS 3533883 3534092 . + 0 ID=cds-QIE16650.1;Parent=gene-IXO1088_017115;Dbxref=NCBI_GP:QIE16650.1;Name=QIE16650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167594.1;locus_tag=IXO1088_017115;product=hypothetical protein;protein_id=QIE16650.1;transl_table=11 CP040687.1 Genbank gene 3534089 3534307 . + . ID=gene-IXO1088_017120;Name=IXO1088_017120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017120 CP040687.1 Protein Homology CDS 3534089 3534307 . + 0 ID=cds-QIE16651.1;Parent=gene-IXO1088_017120;Dbxref=NCBI_GP:QIE16651.1;Name=QIE16651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922239.1;locus_tag=IXO1088_017120;product=hypothetical protein;protein_id=QIE16651.1;transl_table=11 CP040687.1 Genbank gene 3534307 3535548 . + . ID=gene-IXO1088_017125;Name=IXO1088_017125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017125 CP040687.1 Protein Homology CDS 3534307 3535548 . + 0 ID=cds-QIE16652.1;Parent=gene-IXO1088_017125;Dbxref=NCBI_GP:QIE16652.1;Name=QIE16652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051722.1;locus_tag=IXO1088_017125;product=integrase;protein_id=QIE16652.1;transl_table=11 CP040687.1 Genbank gene 3535626 3535702 . - . ID=gene-IXO1088_017130;Name=IXO1088_017130;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_017130 CP040687.1 tRNAscan-SE tRNA 3535626 3535702 . - . ID=rna-IXO1088_017130;Parent=gene-IXO1088_017130;anticodon=(pos:complement(3535666..3535668));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_017130;product=tRNA-Asn CP040687.1 tRNAscan-SE exon 3535626 3535702 . - . ID=exon-IXO1088_017130-1;Parent=rna-IXO1088_017130;anticodon=(pos:complement(3535666..3535668));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_017130;product=tRNA-Asn CP040687.1 Genbank gene 3535755 3536210 . - . ID=gene-IXO1088_017135;Name=IXO1088_017135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017135 CP040687.1 Protein Homology CDS 3535755 3536210 . - 0 ID=cds-QIE16653.1;Parent=gene-IXO1088_017135;Dbxref=NCBI_GP:QIE16653.1;Name=QIE16653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019299932.1;locus_tag=IXO1088_017135;product=type IV pilin protein;protein_id=QIE16653.1;transl_table=11 CP040687.1 Genbank gene 3536217 3540200 . - . ID=gene-IXO1088_017140;Name=IXO1088_017140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017140 CP040687.1 Protein Homology CDS 3536217 3540200 . - 0 ID=cds-QIE16654.1;Parent=gene-IXO1088_017140;Dbxref=NCBI_GP:QIE16654.1;Name=QIE16654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409047.1;locus_tag=IXO1088_017140;product=pilus assembly protein;protein_id=QIE16654.1;transl_table=11 CP040687.1 Genbank gene 3540157 3540666 . - . ID=gene-IXO1088_017145;Name=IXO1088_017145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017145 CP040687.1 Protein Homology CDS 3540157 3540666 . - 0 ID=cds-QIE16655.1;Parent=gene-IXO1088_017145;Dbxref=NCBI_GP:QIE16655.1;Name=QIE16655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259718.1;locus_tag=IXO1088_017145;product=pilus assembly protein;protein_id=QIE16655.1;transl_table=11 CP040687.1 Genbank gene 3540670 3541836 . - . ID=gene-IXO1088_017150;Name=IXO1088_017150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017150 CP040687.1 Protein Homology CDS 3540670 3541836 . - 0 ID=cds-QIE16656.1;Parent=gene-IXO1088_017150;Dbxref=NCBI_GP:QIE16656.1;Name=QIE16656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259719.1;locus_tag=IXO1088_017150;product=pilus assembly protein PilW;protein_id=QIE16656.1;transl_table=11 CP040687.1 Genbank gene 3541833 3542306 . - . ID=gene-IXO1088_017155;Name=pilV;gbkey=Gene;gene=pilV;gene_biotype=protein_coding;locus_tag=IXO1088_017155 CP040687.1 Protein Homology CDS 3541833 3542306 . - 0 ID=cds-QIE16657.1;Parent=gene-IXO1088_017155;Dbxref=NCBI_GP:QIE16657.1;Name=QIE16657.1;gbkey=CDS;gene=pilV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259720.1;locus_tag=IXO1088_017155;product=type IV pilus modification protein PilV;protein_id=QIE16657.1;transl_table=11 CP040687.1 Genbank gene 3542303 3542818 . - . ID=gene-IXO1088_017160;Name=IXO1088_017160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017160 CP040687.1 Protein Homology CDS 3542303 3542818 . - 0 ID=cds-QIE16658.1;Parent=gene-IXO1088_017160;Dbxref=NCBI_GP:QIE16658.1;Name=QIE16658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259721.1;locus_tag=IXO1088_017160;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=QIE16658.1;transl_table=11 CP040687.1 Genbank gene 3542988 3544373 . - . ID=gene-IXO1088_017165;Name=IXO1088_017165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017165 CP040687.1 Protein Homology CDS 3542988 3544373 . - 0 ID=cds-QIE16659.1;Parent=gene-IXO1088_017165;Dbxref=NCBI_GP:QIE16659.1;Name=QIE16659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154671.1;locus_tag=IXO1088_017165;product=LOG family protein;protein_id=QIE16659.1;transl_table=11 CP040687.1 Genbank gene 3544480 3547674 . - . ID=gene-IXO1088_017170;Name=IXO1088_017170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017170 CP040687.1 Protein Homology CDS 3544480 3547674 . - 0 ID=cds-QIE16660.1;Parent=gene-IXO1088_017170;Dbxref=NCBI_GP:QIE16660.1;Name=QIE16660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167812.1;locus_tag=IXO1088_017170;product=TonB-dependent receptor;protein_id=QIE16660.1;transl_table=11 CP040687.1 Genbank gene 3548287 3548363 . - . ID=gene-IXO1088_017175;Name=IXO1088_017175;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_017175 CP040687.1 cmsearch ncRNA 3548287 3548363 . - . ID=rna-IXO1088_017175;Parent=gene-IXO1088_017175;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_017175;product=sX9 sRNA CP040687.1 cmsearch exon 3548287 3548363 . - . ID=exon-IXO1088_017175-1;Parent=rna-IXO1088_017175;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_017175;product=sX9 sRNA CP040687.1 Genbank gene 3548432 3549031 . - . ID=gene-IXO1088_017180;Name=IXO1088_017180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017180 CP040687.1 Protein Homology CDS 3548432 3549031 . - 0 ID=cds-QIE16661.1;Parent=gene-IXO1088_017180;Dbxref=NCBI_GP:QIE16661.1;Name=QIE16661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637848.1;locus_tag=IXO1088_017180;product=YhgN family NAAT transporter;protein_id=QIE16661.1;transl_table=11 CP040687.1 Genbank gene 3549028 3549771 . - . ID=gene-IXO1088_017185;Name=IXO1088_017185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017185 CP040687.1 Protein Homology CDS 3549028 3549771 . - 0 ID=cds-QIE16662.1;Parent=gene-IXO1088_017185;Dbxref=NCBI_GP:QIE16662.1;Name=QIE16662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503773.1;locus_tag=IXO1088_017185;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=QIE16662.1;transl_table=11 CP040687.1 Genbank gene 3549768 3550088 . - . ID=gene-IXO1088_017190;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=IXO1088_017190 CP040687.1 Protein Homology CDS 3549768 3550088 . - 0 ID=cds-QIE16663.1;Parent=gene-IXO1088_017190;Dbxref=NCBI_GP:QIE16663.1;Name=QIE16663.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637850.1;locus_tag=IXO1088_017190;product=Grx4 family monothiol glutaredoxin;protein_id=QIE16663.1;transl_table=11 CP040687.1 Genbank gene 3550210 3550788 . + . ID=gene-IXO1088_017195;Name=IXO1088_017195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017195 CP040687.1 Protein Homology CDS 3550210 3550788 . + 0 ID=cds-QIE16664.1;Parent=gene-IXO1088_017195;Dbxref=NCBI_GP:QIE16664.1;Name=QIE16664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259727.1;locus_tag=IXO1088_017195;product=superoxide dismutase;protein_id=QIE16664.1;transl_table=11 CP040687.1 Genbank gene 3550930 3552075 . - . ID=gene-IXO1088_017200;Name=IXO1088_017200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017200 CP040687.1 Protein Homology CDS 3550930 3552075 . - 0 ID=cds-QIE16665.1;Parent=gene-IXO1088_017200;Dbxref=NCBI_GP:QIE16665.1;Name=QIE16665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051762.1;locus_tag=IXO1088_017200;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=QIE16665.1;transl_table=11 CP040687.1 Genbank gene 3552072 3552575 . - . ID=gene-IXO1088_017205;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=IXO1088_017205 CP040687.1 Protein Homology CDS 3552072 3552575 . - 0 ID=cds-QIE16666.1;Parent=gene-IXO1088_017205;Dbxref=NCBI_GP:QIE16666.1;Name=QIE16666.1;gbkey=CDS;gene=purE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637853.1;locus_tag=IXO1088_017205;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=QIE16666.1;transl_table=11 CP040687.1 Genbank gene 3552634 3552903 . + . ID=gene-IXO1088_017210;Name=IXO1088_017210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017210 CP040687.1 Protein Homology CDS 3552634 3552903 . + 0 ID=cds-QIE16667.1;Parent=gene-IXO1088_017210;Dbxref=NCBI_GP:QIE16667.1;Name=QIE16667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637854.1;locus_tag=IXO1088_017210;product=Trm112 family protein;protein_id=QIE16667.1;transl_table=11 CP040687.1 Genbank gene 3552900 3553787 . + . ID=gene-IXO1088_017215;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=IXO1088_017215 CP040687.1 Protein Homology CDS 3552900 3553787 . + 0 ID=cds-QIE16668.1;Parent=gene-IXO1088_017215;Dbxref=NCBI_GP:QIE16668.1;Name=QIE16668.1;gbkey=CDS;gene=nadC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158758.1;locus_tag=IXO1088_017215;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=QIE16668.1;transl_table=11 CP040687.1 Genbank gene 3553851 3554891 . + . ID=gene-IXO1088_017220;Name=IXO1088_017220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017220 CP040687.1 Protein Homology CDS 3553851 3554891 . + 0 ID=cds-QIE16669.1;Parent=gene-IXO1088_017220;Dbxref=NCBI_GP:QIE16669.1;Name=QIE16669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156103.1;locus_tag=IXO1088_017220;product=DUF2272 domain-containing protein;protein_id=QIE16669.1;transl_table=11 CP040687.1 Genbank gene 3555265 3557379 . - . ID=gene-IXO1088_017225;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=IXO1088_017225 CP040687.1 Protein Homology CDS 3555265 3557379 . - 0 ID=cds-QIE16670.1;Parent=gene-IXO1088_017225;Dbxref=NCBI_GP:QIE16670.1;Name=QIE16670.1;gbkey=CDS;gene=pnp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637857.1;locus_tag=IXO1088_017225;product=polyribonucleotide nucleotidyltransferase;protein_id=QIE16670.1;transl_table=11 CP040687.1 Genbank gene 3557545 3557805 . - . ID=gene-IXO1088_017230;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=IXO1088_017230 CP040687.1 Protein Homology CDS 3557545 3557805 . - 0 ID=cds-QIE16671.1;Parent=gene-IXO1088_017230;Dbxref=NCBI_GP:QIE16671.1;Name=QIE16671.1;gbkey=CDS;gene=rpsO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003467392.1;locus_tag=IXO1088_017230;product=30S ribosomal protein S15;protein_id=QIE16671.1;transl_table=11 CP040687.1 Genbank gene 3557962 3558888 . - . ID=gene-IXO1088_017235;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=IXO1088_017235 CP040687.1 Protein Homology CDS 3557962 3558888 . - 0 ID=cds-QIE16672.1;Parent=gene-IXO1088_017235;Dbxref=NCBI_GP:QIE16672.1;Name=QIE16672.1;gbkey=CDS;gene=truB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637859.1;locus_tag=IXO1088_017235;product=tRNA pseudouridine(55) synthase TruB;protein_id=QIE16672.1;transl_table=11 CP040687.1 Genbank gene 3558968 3559360 . - . ID=gene-IXO1088_017240;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=IXO1088_017240 CP040687.1 Protein Homology CDS 3558968 3559360 . - 0 ID=cds-QIE16673.1;Parent=gene-IXO1088_017240;Dbxref=NCBI_GP:QIE16673.1;Name=QIE16673.1;gbkey=CDS;gene=rbfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051765.1;locus_tag=IXO1088_017240;product=30S ribosome-binding factor RbfA;protein_id=QIE16673.1;transl_table=11 CP040687.1 Genbank gene 3559504 3562266 . - . ID=gene-IXO1088_017245;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=IXO1088_017245 CP040687.1 Protein Homology CDS 3559504 3562266 . - 0 ID=cds-QIE16674.1;Parent=gene-IXO1088_017245;Dbxref=NCBI_GP:QIE16674.1;Name=QIE16674.1;gbkey=CDS;gene=infB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637861.1;locus_tag=IXO1088_017245;product=translation initiation factor IF-2;protein_id=QIE16674.1;transl_table=11 CP040687.1 Genbank gene 3562320 3563831 . - . ID=gene-IXO1088_017250;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=IXO1088_017250 CP040687.1 Protein Homology CDS 3562320 3563831 . - 0 ID=cds-QIE16675.1;Parent=gene-IXO1088_017250;Dbxref=NCBI_GP:QIE16675.1;Name=QIE16675.1;gbkey=CDS;gene=nusA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660577.1;locus_tag=IXO1088_017250;product=transcription termination/antitermination protein NusA;protein_id=QIE16675.1;transl_table=11 CP040687.1 Genbank gene 3563836 3564426 . - . ID=gene-IXO1088_017255;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=IXO1088_017255 CP040687.1 Protein Homology CDS 3563836 3564426 . - 0 ID=cds-QIE16676.1;Parent=gene-IXO1088_017255;Dbxref=NCBI_GP:QIE16676.1;Name=QIE16676.1;gbkey=CDS;gene=rimP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637863.1;locus_tag=IXO1088_017255;product=ribosome maturation factor RimP;protein_id=QIE16676.1;transl_table=11 CP040687.1 Genbank gene 3564624 3564700 . - . ID=gene-IXO1088_017260;Name=IXO1088_017260;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_017260 CP040687.1 tRNAscan-SE tRNA 3564624 3564700 . - . ID=rna-IXO1088_017260;Parent=gene-IXO1088_017260;anticodon=(pos:complement(3564664..3564666));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_017260;product=tRNA-Met CP040687.1 tRNAscan-SE exon 3564624 3564700 . - . ID=exon-IXO1088_017260-1;Parent=rna-IXO1088_017260;anticodon=(pos:complement(3564664..3564666));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_017260;product=tRNA-Met CP040687.1 Genbank gene 3564901 3566361 . - . ID=gene-IXO1088_017265;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=IXO1088_017265 CP040687.1 Protein Homology CDS 3564901 3566361 . - 0 ID=cds-QIE18050.1;Parent=gene-IXO1088_017265;Dbxref=NCBI_GP:QIE18050.1;Name=QIE18050.1;gbkey=CDS;gene=nuoN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637864.1;locus_tag=IXO1088_017265;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=QIE18050.1;transl_table=11 CP040687.1 Genbank gene 3566398 3567900 . - . ID=gene-IXO1088_017270;Name=IXO1088_017270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017270 CP040687.1 Protein Homology CDS 3566398 3567900 . - 0 ID=cds-QIE16677.1;Parent=gene-IXO1088_017270;Dbxref=NCBI_GP:QIE16677.1;Name=QIE16677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637865.1;locus_tag=IXO1088_017270;product=NADH-quinone oxidoreductase subunit M;protein_id=QIE16677.1;transl_table=11 CP040687.1 Genbank gene 3567921 3570080 . - . ID=gene-IXO1088_017275;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=IXO1088_017275 CP040687.1 Protein Homology CDS 3567921 3570080 . - 0 ID=cds-QIE16678.1;Parent=gene-IXO1088_017275;Dbxref=NCBI_GP:QIE16678.1;Name=QIE16678.1;gbkey=CDS;gene=nuoL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637866.1;locus_tag=IXO1088_017275;product=NADH-quinone oxidoreductase subunit L;protein_id=QIE16678.1;transl_table=11 CP040687.1 Genbank gene 3570088 3570393 . - . ID=gene-IXO1088_017280;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=IXO1088_017280 CP040687.1 Protein Homology CDS 3570088 3570393 . - 0 ID=cds-QIE16679.1;Parent=gene-IXO1088_017280;Dbxref=NCBI_GP:QIE16679.1;Name=QIE16679.1;gbkey=CDS;gene=nuoK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637867.1;locus_tag=IXO1088_017280;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=QIE16679.1;transl_table=11 CP040687.1 Genbank gene 3570390 3571049 . - . ID=gene-IXO1088_017285;Name=IXO1088_017285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017285 CP040687.1 Protein Homology CDS 3570390 3571049 . - 0 ID=cds-QIE18051.1;Parent=gene-IXO1088_017285;Dbxref=NCBI_GP:QIE18051.1;Name=QIE18051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637868.1;locus_tag=IXO1088_017285;product=NADH-quinone oxidoreductase subunit J;protein_id=QIE18051.1;transl_table=11 CP040687.1 Genbank gene 3571057 3571545 . - . ID=gene-IXO1088_017290;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=IXO1088_017290 CP040687.1 Protein Homology CDS 3571057 3571545 . - 0 ID=cds-QIE16680.1;Parent=gene-IXO1088_017290;Dbxref=NCBI_GP:QIE16680.1;Name=QIE16680.1;gbkey=CDS;gene=nuoI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927506.1;locus_tag=IXO1088_017290;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=QIE16680.1;transl_table=11 CP040687.1 Genbank gene 3571549 3572640 . - . ID=gene-IXO1088_017295;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=IXO1088_017295 CP040687.1 Protein Homology CDS 3571549 3572640 . - 0 ID=cds-QIE16681.1;Parent=gene-IXO1088_017295;Dbxref=NCBI_GP:QIE16681.1;Name=QIE16681.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637870.2;locus_tag=IXO1088_017295;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=QIE16681.1;transl_table=11 CP040687.1 Genbank gene 3572637 3574871 . - . ID=gene-IXO1088_017300;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=IXO1088_017300 CP040687.1 Protein Homology CDS 3572637 3574871 . - 0 ID=cds-QIE16682.1;Parent=gene-IXO1088_017300;Dbxref=NCBI_GP:QIE16682.1;Name=QIE16682.1;gbkey=CDS;gene=nuoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637871.1;locus_tag=IXO1088_017300;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=QIE16682.1;transl_table=11 CP040687.1 Genbank gene 3574868 3576202 . - . ID=gene-IXO1088_017305;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=IXO1088_017305 CP040687.1 Protein Homology CDS 3574868 3576202 . - 0 ID=cds-QIE16683.1;Parent=gene-IXO1088_017305;Dbxref=NCBI_GP:QIE16683.1;Name=QIE16683.1;gbkey=CDS;gene=nuoF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637872.1;locus_tag=IXO1088_017305;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=QIE16683.1;transl_table=11 CP040687.1 Genbank gene 3576206 3576733 . - . ID=gene-IXO1088_017310;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=IXO1088_017310 CP040687.1 Protein Homology CDS 3576206 3576733 . - 0 ID=cds-QIE16684.1;Parent=gene-IXO1088_017310;Dbxref=NCBI_GP:QIE16684.1;Name=QIE16684.1;gbkey=CDS;gene=nuoE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005410460.1;locus_tag=IXO1088_017310;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=QIE16684.1;transl_table=11 CP040687.1 Genbank gene 3576730 3578037 . - . ID=gene-IXO1088_017315;Name=IXO1088_017315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017315 CP040687.1 Protein Homology CDS 3576730 3578037 . - 0 ID=cds-QIE16685.1;Parent=gene-IXO1088_017315;Dbxref=NCBI_GP:QIE16685.1;Name=QIE16685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810223.1;locus_tag=IXO1088_017315;product=NADH-quinone oxidoreductase subunit D;protein_id=QIE16685.1;transl_table=11 CP040687.1 Genbank gene 3578034 3578786 . - . ID=gene-IXO1088_017320;Name=IXO1088_017320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017320 CP040687.1 Protein Homology CDS 3578034 3578786 . - 0 ID=cds-QIE16686.1;Parent=gene-IXO1088_017320;Dbxref=NCBI_GP:QIE16686.1;Name=QIE16686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637875.1;locus_tag=IXO1088_017320;product=NADH-quinone oxidoreductase subunit C;protein_id=QIE16686.1;transl_table=11 CP040687.1 Genbank gene 3578823 3579377 . - . ID=gene-IXO1088_017325;Name=IXO1088_017325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017325 CP040687.1 Protein Homology CDS 3578823 3579377 . - 0 ID=cds-QIE16687.1;Parent=gene-IXO1088_017325;Dbxref=NCBI_GP:QIE16687.1;Name=QIE16687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914280.1;locus_tag=IXO1088_017325;product=NADH-quinone oxidoreductase subunit B;protein_id=QIE16687.1;transl_table=11 CP040687.1 Genbank gene 3579368 3579724 . - . ID=gene-IXO1088_017330;Name=IXO1088_017330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017330 CP040687.1 Protein Homology CDS 3579368 3579724 . - 0 ID=cds-QIE16688.1;Parent=gene-IXO1088_017330;Dbxref=NCBI_GP:QIE16688.1;Name=QIE16688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003467430.1;locus_tag=IXO1088_017330;product=NADH-quinone oxidoreductase subunit A;protein_id=QIE16688.1;transl_table=11 CP040687.1 Genbank gene 3579827 3579911 . - . ID=gene-IXO1088_017335;Name=IXO1088_017335;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_017335 CP040687.1 tRNAscan-SE tRNA 3579827 3579911 . - . ID=rna-IXO1088_017335;Parent=gene-IXO1088_017335;anticodon=(pos:complement(3579875..3579877));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_017335;product=tRNA-Leu CP040687.1 tRNAscan-SE exon 3579827 3579911 . - . ID=exon-IXO1088_017335-1;Parent=rna-IXO1088_017335;anticodon=(pos:complement(3579875..3579877));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_017335;product=tRNA-Leu CP040687.1 Genbank gene 3579961 3580422 . - . ID=gene-IXO1088_017340;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=IXO1088_017340 CP040687.1 Protein Homology CDS 3579961 3580422 . - 0 ID=cds-QIE16689.1;Parent=gene-IXO1088_017340;Dbxref=NCBI_GP:QIE16689.1;Name=QIE16689.1;gbkey=CDS;gene=secG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008570967.1;locus_tag=IXO1088_017340;product=preprotein translocase subunit SecG;protein_id=QIE16689.1;transl_table=11 CP040687.1 Genbank gene 3580456 3581211 . - . ID=gene-IXO1088_017345;Name=IXO1088_017345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017345 CP040687.1 Protein Homology CDS 3580456 3581211 . - 0 ID=cds-QIE16690.1;Parent=gene-IXO1088_017345;Dbxref=NCBI_GP:QIE16690.1;Name=QIE16690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637879.1;locus_tag=IXO1088_017345;product=triose-phosphate isomerase;protein_id=QIE16690.1;transl_table=11 CP040687.1 Genbank gene 3581324 3582124 . + . ID=gene-IXO1088_017350;Name=IXO1088_017350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017350 CP040687.1 Protein Homology CDS 3581324 3582124 . + 0 ID=cds-QIE16691.1;Parent=gene-IXO1088_017350;Dbxref=NCBI_GP:QIE16691.1;Name=QIE16691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637880.1;locus_tag=IXO1088_017350;product=SDR family oxidoreductase;protein_id=QIE16691.1;transl_table=11 CP040687.1 Genbank gene 3582316 3582392 . + . ID=gene-IXO1088_017355;Name=IXO1088_017355;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_017355 CP040687.1 cmsearch ncRNA 3582316 3582392 . + . ID=rna-IXO1088_017355;Parent=gene-IXO1088_017355;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_017355;product=sX9 sRNA CP040687.1 cmsearch exon 3582316 3582392 . + . ID=exon-IXO1088_017355-1;Parent=rna-IXO1088_017355;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_017355;product=sX9 sRNA CP040687.1 Genbank gene 3582475 3582903 . - . ID=gene-IXO1088_017360;Name=IXO1088_017360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017360 CP040687.1 Protein Homology CDS 3582475 3582903 . - 0 ID=cds-QIE16692.1;Parent=gene-IXO1088_017360;Dbxref=NCBI_GP:QIE16692.1;Name=QIE16692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810241.1;locus_tag=IXO1088_017360;product=group 1 truncated hemoglobin;protein_id=QIE16692.1;transl_table=11 CP040687.1 Genbank pseudogene 3582903 3583001 . - . ID=gene-IXO1088_017365;Name=IXO1088_017365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_017365;pseudo=true CP040687.1 Protein Homology CDS 3582903 3583001 . - 0 ID=cds-IXO1088_017365;Parent=gene-IXO1088_017365;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300400.1;locus_tag=IXO1088_017365;product=DUF3034 family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3583068 3583831 . - . ID=gene-IXO1088_017370;Name=IXO1088_017370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017370 CP040687.1 Protein Homology CDS 3583516 3583831 . - 0 ID=cds-QIE16693.1;Parent=gene-IXO1088_017370;Dbxref=NCBI_GP:QIE16693.1;Name=QIE16693.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_017370;product=IS5 family transposase;protein_id=QIE16693.1;transl_table=11 CP040687.1 Protein Homology CDS 3583068 3583516 . - 2 ID=cds-QIE16693.1;Parent=gene-IXO1088_017370;Dbxref=NCBI_GP:QIE16693.1;Name=QIE16693.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_017370;product=IS5 family transposase;protein_id=QIE16693.1;transl_table=11 CP040687.1 Genbank pseudogene 3583989 3584775 . + . ID=gene-IXO1088_017375;Name=IXO1088_017375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_017375;pseudo=true CP040687.1 Protein Homology CDS 3583989 3584775 . + 0 ID=cds-IXO1088_017375;Parent=gene-IXO1088_017375;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011805842.1;locus_tag=IXO1088_017375;product=IS481 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3584664 3584909 . - . ID=gene-IXO1088_017380;Name=IXO1088_017380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017380 CP040687.1 Protein Homology CDS 3584664 3584909 . - 0 ID=cds-QIE16694.1;Parent=gene-IXO1088_017380;Dbxref=NCBI_GP:QIE16694.1;Name=QIE16694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300400.1;locus_tag=IXO1088_017380;product=hypothetical protein;protein_id=QIE16694.1;transl_table=11 CP040687.1 Genbank gene 3584855 3587221 . - . ID=gene-IXO1088_017385;Name=IXO1088_017385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017385 CP040687.1 Protein Homology CDS 3584855 3587221 . - 0 ID=cds-QIE16695.1;Parent=gene-IXO1088_017385;Dbxref=NCBI_GP:QIE16695.1;Name=QIE16695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637884.2;locus_tag=IXO1088_017385;product=EAL domain-containing protein;protein_id=QIE16695.1;transl_table=11 CP040687.1 Genbank gene 3587218 3587892 . - . ID=gene-IXO1088_017390;Name=IXO1088_017390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017390 CP040687.1 Protein Homology CDS 3587218 3587892 . - 0 ID=cds-QIE18052.1;Parent=gene-IXO1088_017390;Dbxref=NCBI_GP:QIE18052.1;Name=QIE18052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485525.1;locus_tag=IXO1088_017390;product=methylamine utilization protein;protein_id=QIE18052.1;transl_table=11 CP040687.1 Genbank gene 3588102 3589040 . - . ID=gene-IXO1088_017395;Name=IXO1088_017395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017395 CP040687.1 Protein Homology CDS 3588102 3589040 . - 0 ID=cds-QIE16696.1;Parent=gene-IXO1088_017395;Dbxref=NCBI_GP:QIE16696.1;Name=QIE16696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485523.1;locus_tag=IXO1088_017395;product=isopenicillin N synthase family oxygenase;protein_id=QIE16696.1;transl_table=11 CP040687.1 Genbank gene 3589163 3590512 . - . ID=gene-IXO1088_017400;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=IXO1088_017400 CP040687.1 Protein Homology CDS 3589163 3590512 . - 0 ID=cds-QIE16697.1;Parent=gene-IXO1088_017400;Dbxref=NCBI_GP:QIE16697.1;Name=QIE16697.1;gbkey=CDS;gene=glmM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637887.1;locus_tag=IXO1088_017400;product=phosphoglucosamine mutase;protein_id=QIE16697.1;transl_table=11 CP040687.1 Genbank gene 3590509 3591396 . - . ID=gene-IXO1088_017405;Name=IXO1088_017405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017405 CP040687.1 Protein Homology CDS 3590509 3591396 . - 0 ID=cds-QIE16698.1;Parent=gene-IXO1088_017405;Dbxref=NCBI_GP:QIE16698.1;Name=QIE16698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637888.1;locus_tag=IXO1088_017405;product=acetyl-CoA carboxylase carboxyltransferase subunit beta;protein_id=QIE16698.1;transl_table=11 CP040687.1 Genbank pseudogene 3591613 3591696 . + . ID=gene-IXO1088_017410;Name=IXO1088_017410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_017410;pseudo=true CP040687.1 Protein Homology CDS 3591613 3591696 . + 0 ID=cds-IXO1088_017410;Parent=gene-IXO1088_017410;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438167.1;locus_tag=IXO1088_017410;product=SufE family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3591716 3592522 . - . ID=gene-IXO1088_017415;Name=IXO1088_017415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017415 CP040687.1 Protein Homology CDS 3591716 3592522 . - 0 ID=cds-QIE16699.1;Parent=gene-IXO1088_017415;Dbxref=NCBI_GP:QIE16699.1;Name=QIE16699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503808.1;locus_tag=IXO1088_017415;product=tryptophan synthase subunit alpha;protein_id=QIE16699.1;transl_table=11 CP040687.1 Genbank pseudogene 3592571 3592923 . - . ID=gene-IXO1088_017420;Name=IXO1088_017420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_017420;pseudo=true CP040687.1 Protein Homology CDS 3592571 3592923 . - 0 ID=cds-IXO1088_017420;Parent=gene-IXO1088_017420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008570955.1;locus_tag=IXO1088_017420;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3592968 3594185 . - . ID=gene-IXO1088_017425;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=IXO1088_017425 CP040687.1 Protein Homology CDS 3592968 3594185 . - 0 ID=cds-QIE16700.1;Parent=gene-IXO1088_017425;Dbxref=NCBI_GP:QIE16700.1;Name=QIE16700.1;gbkey=CDS;gene=trpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637891.1;locus_tag=IXO1088_017425;product=tryptophan synthase subunit beta;protein_id=QIE16700.1;transl_table=11 CP040687.1 Genbank gene 3594291 3595259 . + . ID=gene-IXO1088_017430;Name=IXO1088_017430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017430 CP040687.1 Protein Homology CDS 3594291 3595259 . + 0 ID=cds-QIE16701.1;Parent=gene-IXO1088_017430;Dbxref=NCBI_GP:QIE16701.1;Name=QIE16701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409068.1;locus_tag=IXO1088_017430;product=LysR family transcriptional regulator;protein_id=QIE16701.1;transl_table=11 CP040687.1 Genbank gene 3595595 3596263 . - . ID=gene-IXO1088_017435;Name=IXO1088_017435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017435 CP040687.1 Protein Homology CDS 3595595 3596263 . - 0 ID=cds-QIE16702.1;Parent=gene-IXO1088_017435;Dbxref=NCBI_GP:QIE16702.1;Name=QIE16702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637893.1;locus_tag=IXO1088_017435;product=phosphoribosylanthranilate isomerase;protein_id=QIE16702.1;transl_table=11 CP040687.1 Genbank gene 3596260 3597033 . - . ID=gene-IXO1088_017440;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=IXO1088_017440 CP040687.1 Protein Homology CDS 3596260 3597033 . - 0 ID=cds-QIE16703.1;Parent=gene-IXO1088_017440;Dbxref=NCBI_GP:QIE16703.1;Name=QIE16703.1;gbkey=CDS;gene=truA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637894.1;locus_tag=IXO1088_017440;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=QIE16703.1;transl_table=11 CP040687.1 Genbank pseudogene 3597203 3597610 . - . ID=gene-IXO1088_017445;Name=IXO1088_017445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_017445;pseudo=true CP040687.1 Protein Homology CDS 3597203 3597610 . - 0 ID=cds-IXO1088_017445;Parent=gene-IXO1088_017445;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379378.1;locus_tag=IXO1088_017445;product=VOC family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3597607 3599673 . - . ID=gene-IXO1088_017450;Name=IXO1088_017450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017450 CP040687.1 Protein Homology CDS 3597607 3599673 . - 0 ID=cds-QIE16704.1;Parent=gene-IXO1088_017450;Dbxref=NCBI_GP:QIE16704.1;Name=QIE16704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637896.1;locus_tag=IXO1088_017450;product=ferrous iron transporter B;protein_id=QIE16704.1;transl_table=11 CP040687.1 Genbank gene 3600106 3600181 . - . ID=gene-IXO1088_017455;Name=IXO1088_017455;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_017455 CP040687.1 cmsearch ncRNA 3600106 3600181 . - . ID=rna-IXO1088_017455;Parent=gene-IXO1088_017455;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_017455;product=sX9 sRNA CP040687.1 cmsearch exon 3600106 3600181 . - . ID=exon-IXO1088_017455-1;Parent=rna-IXO1088_017455;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_017455;product=sX9 sRNA CP040687.1 Genbank gene 3600240 3601265 . - . ID=gene-IXO1088_017460;Name=IXO1088_017460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017460 CP040687.1 Protein Homology CDS 3600240 3601265 . - 0 ID=cds-QIE16705.1;Parent=gene-IXO1088_017460;Dbxref=NCBI_GP:QIE16705.1;Name=QIE16705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637897.1;locus_tag=IXO1088_017460;product=aspartate-semialdehyde dehydrogenase;protein_id=QIE16705.1;transl_table=11 CP040687.1 Genbank gene 3601350 3602423 . - . ID=gene-IXO1088_017465;Name=IXO1088_017465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017465 CP040687.1 Protein Homology CDS 3601350 3602423 . - 0 ID=cds-QIE16706.1;Parent=gene-IXO1088_017465;Dbxref=NCBI_GP:QIE16706.1;Name=QIE16706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379384.1;locus_tag=IXO1088_017465;product=D-glycerate dehydrogenase;protein_id=QIE16706.1;transl_table=11 CP040687.1 Genbank gene 3602416 3603519 . - . ID=gene-IXO1088_017470;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=IXO1088_017470 CP040687.1 Protein Homology CDS 3602416 3603519 . - 0 ID=cds-QIE16707.1;Parent=gene-IXO1088_017470;Dbxref=NCBI_GP:QIE16707.1;Name=QIE16707.1;gbkey=CDS;gene=aroC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637899.1;locus_tag=IXO1088_017470;product=chorismate synthase;protein_id=QIE16707.1;transl_table=11 CP040687.1 Genbank gene 3603530 3604456 . - . ID=gene-IXO1088_017475;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=IXO1088_017475 CP040687.1 Protein Homology CDS 3603530 3604456 . - 0 ID=cds-QIE16708.1;Parent=gene-IXO1088_017475;Dbxref=NCBI_GP:QIE16708.1;Name=QIE16708.1;gbkey=CDS;gene=prmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637901.1;locus_tag=IXO1088_017475;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=QIE16708.1;transl_table=11 CP040687.1 Genbank gene 3604537 3605187 . + . ID=gene-IXO1088_017480;Name=IXO1088_017480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017480 CP040687.1 Protein Homology CDS 3604537 3605187 . + 0 ID=cds-QIE16709.1;Parent=gene-IXO1088_017480;Dbxref=NCBI_GP:QIE16709.1;Name=QIE16709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637902.1;locus_tag=IXO1088_017480;product=SCO family protein;protein_id=QIE16709.1;transl_table=11 CP040687.1 Genbank gene 3605184 3606032 . + . ID=gene-IXO1088_017485;Name=psd;gbkey=Gene;gene=psd;gene_biotype=protein_coding;locus_tag=IXO1088_017485 CP040687.1 Protein Homology CDS 3605184 3606032 . + 0 ID=cds-QIE16710.1;Parent=gene-IXO1088_017485;Dbxref=NCBI_GP:QIE16710.1;Name=QIE16710.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;gbkey=CDS;gene=psd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366694.1;locus_tag=IXO1088_017485;product=phosphatidylserine decarboxylase;protein_id=QIE16710.1;transl_table=11 CP040687.1 Genbank gene 3606101 3606176 . - . ID=gene-IXO1088_017490;Name=IXO1088_017490;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_017490 CP040687.1 cmsearch ncRNA 3606101 3606176 . - . ID=rna-IXO1088_017490;Parent=gene-IXO1088_017490;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_017490;product=sX9 sRNA CP040687.1 cmsearch exon 3606101 3606176 . - . ID=exon-IXO1088_017490-1;Parent=rna-IXO1088_017490;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_017490;product=sX9 sRNA CP040687.1 Genbank gene 3606583 3608166 . - . ID=gene-IXO1088_017495;Name=IXO1088_017495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017495 CP040687.1 Protein Homology CDS 3606583 3608166 . - 0 ID=cds-QIE16711.1;Parent=gene-IXO1088_017495;Dbxref=NCBI_GP:QIE16711.1;Name=QIE16711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914309.1;locus_tag=IXO1088_017495;product=LysM peptidoglycan-binding domain-containing protein;protein_id=QIE16711.1;transl_table=11 CP040687.1 Genbank gene 3608086 3608271 . + . ID=gene-IXO1088_017500;Name=IXO1088_017500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017500 CP040687.1 Protein Homology CDS 3608086 3608271 . + 0 ID=cds-QIE16712.1;Parent=gene-IXO1088_017500;Dbxref=NCBI_GP:QIE16712.1;Name=QIE16712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445550.1;locus_tag=IXO1088_017500;product=hypothetical protein;protein_id=QIE16712.1;transl_table=11 CP040687.1 Genbank pseudogene 3608461 3608784 . + . ID=gene-IXO1088_017505;Name=IXO1088_017505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_017505;pseudo=true CP040687.1 Protein Homology CDS 3608461 3608784 . + 0 ID=cds-IXO1088_017505;Parent=gene-IXO1088_017505;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637906.1;locus_tag=IXO1088_017505;product=DUF853 family protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3608686 3609344 . - . ID=gene-IXO1088_017510;Name=IXO1088_017510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_017510;pseudo=true CP040687.1 Protein Homology CDS 3608686 3609344 . - 0 ID=cds-IXO1088_017510;Parent=gene-IXO1088_017510;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260515.1;locus_tag=IXO1088_017510;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3609377 3610240 . - . ID=gene-IXO1088_017515;Name=IXO1088_017515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017515 CP040687.1 Protein Homology CDS 3609377 3610240 . - 0 ID=cds-QIE16713.1;Parent=gene-IXO1088_017515;Dbxref=NCBI_GP:QIE16713.1;Name=QIE16713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258055.1;locus_tag=IXO1088_017515;product=IS30 family transposase;protein_id=QIE16713.1;transl_table=11 CP040687.1 Genbank pseudogene 3610318 3610797 . - . ID=gene-IXO1088_017520;Name=IXO1088_017520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_017520;pseudo=true CP040687.1 Protein Homology CDS 3610318 3610797 . - 0 ID=cds-IXO1088_017520;Parent=gene-IXO1088_017520;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637910.2;locus_tag=IXO1088_017520;product=rhomboid family intramembrane serine protease;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3610758 3610994 . - . ID=gene-IXO1088_017525;Name=IXO1088_017525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017525 CP040687.1 GeneMarkS-2+ CDS 3610758 3610994 . - 0 ID=cds-QIE16714.1;Parent=gene-IXO1088_017525;Dbxref=NCBI_GP:QIE16714.1;Name=QIE16714.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_017525;product=hypothetical protein;protein_id=QIE16714.1;transl_table=11 CP040687.1 Genbank gene 3611156 3611662 . + . ID=gene-IXO1088_017530;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=IXO1088_017530 CP040687.1 Protein Homology CDS 3611156 3611662 . + 0 ID=cds-QIE16715.1;Parent=gene-IXO1088_017530;Dbxref=NCBI_GP:QIE16715.1;Name=QIE16715.1;gbkey=CDS;gene=greB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007963950.1;locus_tag=IXO1088_017530;product=transcription elongation factor GreB;protein_id=QIE16715.1;transl_table=11 CP040687.1 Genbank gene 3611784 3613154 . - . ID=gene-IXO1088_017535;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=IXO1088_017535 CP040687.1 Protein Homology CDS 3611784 3613154 . - 0 ID=cds-QIE16716.1;Parent=gene-IXO1088_017535;Dbxref=NCBI_GP:QIE16716.1;Name=QIE16716.1;gbkey=CDS;gene=rimO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637912.1;locus_tag=IXO1088_017535;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=QIE16716.1;transl_table=11 CP040687.1 Genbank gene 3613084 3614874 . + . ID=gene-IXO1088_017540;Name=IXO1088_017540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017540 CP040687.1 Protein Homology CDS 3613084 3614874 . + 0 ID=cds-QIE16717.1;Parent=gene-IXO1088_017540;Dbxref=NCBI_GP:QIE16717.1;Name=QIE16717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927430.1;locus_tag=IXO1088_017540;product=recombinase family protein;protein_id=QIE16717.1;transl_table=11 CP040687.1 Genbank pseudogene 3614970 3615099 . + . ID=gene-IXO1088_017545;Name=IXO1088_017545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_017545;pseudo=true CP040687.1 Protein Homology CDS 3614970 3615099 . + 0 ID=cds-IXO1088_017545;Parent=gene-IXO1088_017545;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638311.1;locus_tag=IXO1088_017545;product=peptidase S24;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3615220 3615615 . + . ID=gene-IXO1088_017550;Name=IXO1088_017550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_017550;pseudo=true CP040687.1 Protein Homology CDS 3615220 3615615 . + 0 ID=cds-IXO1088_017550;Parent=gene-IXO1088_017550;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113472.1;locus_tag=IXO1088_017550;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3615742 3616710 . - . ID=gene-IXO1088_017555;Name=IXO1088_017555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017555 CP040687.1 Protein Homology CDS 3615742 3616710 . - 0 ID=cds-QIE16718.1;Parent=gene-IXO1088_017555;Dbxref=NCBI_GP:QIE16718.1;Name=QIE16718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_017555;product=IS5-like element ISXo1 family transposase;protein_id=QIE16718.1;transl_table=11 CP040687.1 Genbank gene 3616939 3618666 . + . ID=gene-IXO1088_017560;Name=IXO1088_017560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017560 CP040687.1 Protein Homology CDS 3616939 3618666 . + 0 ID=cds-QIE18053.1;Parent=gene-IXO1088_017560;Dbxref=NCBI_GP:QIE18053.1;Name=QIE18053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116238.1;locus_tag=IXO1088_017560;product=DUF262 domain-containing protein;protein_id=QIE18053.1;transl_table=11 CP040687.1 Genbank gene 3618786 3619061 . - . ID=gene-IXO1088_017565;Name=IXO1088_017565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017565 CP040687.1 Protein Homology CDS 3618786 3619061 . - 0 ID=cds-QIE16719.1;Parent=gene-IXO1088_017565;Dbxref=NCBI_GP:QIE16719.1;Name=QIE16719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116239.1;locus_tag=IXO1088_017565;product=hypothetical protein;protein_id=QIE16719.1;transl_table=11 CP040687.1 Genbank gene 3619058 3619330 . - . ID=gene-IXO1088_017570;Name=IXO1088_017570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017570 CP040687.1 Protein Homology CDS 3619058 3619330 . - 0 ID=cds-QIE16720.1;Parent=gene-IXO1088_017570;Dbxref=NCBI_GP:QIE16720.1;Name=QIE16720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408131.1;locus_tag=IXO1088_017570;product=hypothetical protein;protein_id=QIE16720.1;transl_table=11 CP040687.1 Genbank gene 3619327 3619551 . - . ID=gene-IXO1088_017575;Name=IXO1088_017575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017575 CP040687.1 Protein Homology CDS 3619327 3619551 . - 0 ID=cds-QIE16721.1;Parent=gene-IXO1088_017575;Dbxref=NCBI_GP:QIE16721.1;Name=QIE16721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091205.1;locus_tag=IXO1088_017575;product=hypothetical protein;protein_id=QIE16721.1;transl_table=11 CP040687.1 Genbank gene 3619548 3619820 . - . ID=gene-IXO1088_017580;Name=IXO1088_017580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017580 CP040687.1 Protein Homology CDS 3619548 3619820 . - 0 ID=cds-QIE16722.1;Parent=gene-IXO1088_017580;Dbxref=NCBI_GP:QIE16722.1;Name=QIE16722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116241.1;locus_tag=IXO1088_017580;product=hypothetical protein;protein_id=QIE16722.1;transl_table=11 CP040687.1 Genbank gene 3619982 3620392 . - . ID=gene-IXO1088_017585;Name=IXO1088_017585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017585 CP040687.1 Protein Homology CDS 3619982 3620392 . - 0 ID=cds-QIE16723.1;Parent=gene-IXO1088_017585;Dbxref=NCBI_GP:QIE16723.1;Name=QIE16723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638353.1;locus_tag=IXO1088_017585;product=hypothetical protein;protein_id=QIE16723.1;transl_table=11 CP040687.1 Genbank gene 3620618 3620896 . - . ID=gene-IXO1088_017590;Name=IXO1088_017590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017590 CP040687.1 Protein Homology CDS 3620618 3620896 . - 0 ID=cds-QIE16724.1;Parent=gene-IXO1088_017590;Dbxref=NCBI_GP:QIE16724.1;Name=QIE16724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922224.1;locus_tag=IXO1088_017590;product=hypothetical protein;protein_id=QIE16724.1;transl_table=11 CP040687.1 Genbank gene 3620893 3621111 . - . ID=gene-IXO1088_017595;Name=IXO1088_017595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017595 CP040687.1 Protein Homology CDS 3620893 3621111 . - 0 ID=cds-QIE16725.1;Parent=gene-IXO1088_017595;Dbxref=NCBI_GP:QIE16725.1;Name=QIE16725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922222.1;locus_tag=IXO1088_017595;product=hypothetical protein;protein_id=QIE16725.1;transl_table=11 CP040687.1 Genbank gene 3621420 3624092 . - . ID=gene-IXO1088_017600;Name=IXO1088_017600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017600 CP040687.1 Protein Homology CDS 3621420 3624092 . - 0 ID=cds-QIE18054.1;Parent=gene-IXO1088_017600;Dbxref=NCBI_GP:QIE18054.1;Name=QIE18054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638350.1;locus_tag=IXO1088_017600;product=toprim domain-containing protein;protein_id=QIE18054.1;transl_table=11 CP040687.1 Genbank gene 3624126 3624338 . - . ID=gene-IXO1088_017605;Name=IXO1088_017605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017605 CP040687.1 Protein Homology CDS 3624126 3624338 . - 0 ID=cds-QIE16726.1;Parent=gene-IXO1088_017605;Dbxref=NCBI_GP:QIE16726.1;Name=QIE16726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258450.1;locus_tag=IXO1088_017605;product=hypothetical protein;protein_id=QIE16726.1;transl_table=11 CP040687.1 Genbank gene 3624335 3624613 . - . ID=gene-IXO1088_017610;Name=IXO1088_017610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017610 CP040687.1 Protein Homology CDS 3624335 3624613 . - 0 ID=cds-QIE16727.1;Parent=gene-IXO1088_017610;Dbxref=NCBI_GP:QIE16727.1;Name=QIE16727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851009.1;locus_tag=IXO1088_017610;product=hypothetical protein;protein_id=QIE16727.1;transl_table=11 CP040687.1 Genbank gene 3624624 3624944 . - . ID=gene-IXO1088_017615;Name=IXO1088_017615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017615 CP040687.1 Protein Homology CDS 3624624 3624944 . - 0 ID=cds-QIE18055.1;Parent=gene-IXO1088_017615;Dbxref=NCBI_GP:QIE18055.1;Name=QIE18055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572766.1;locus_tag=IXO1088_017615;product=hypothetical protein;protein_id=QIE18055.1;transl_table=11 CP040687.1 Genbank gene 3624947 3625204 . - . ID=gene-IXO1088_017620;Name=IXO1088_017620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017620 CP040687.1 Protein Homology CDS 3624947 3625204 . - 0 ID=cds-QIE16728.1;Parent=gene-IXO1088_017620;Dbxref=NCBI_GP:QIE16728.1;Name=QIE16728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572763.1;locus_tag=IXO1088_017620;product=DNA-binding protein;protein_id=QIE16728.1;transl_table=11 CP040687.1 Genbank gene 3625276 3625713 . + . ID=gene-IXO1088_017625;Name=IXO1088_017625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017625 CP040687.1 Protein Homology CDS 3625276 3625713 . + 0 ID=cds-QIE16729.1;Parent=gene-IXO1088_017625;Dbxref=NCBI_GP:QIE16729.1;Name=QIE16729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258452.1;locus_tag=IXO1088_017625;product=transcriptional regulator;protein_id=QIE16729.1;transl_table=11 CP040687.1 Genbank gene 3626374 3627360 . - . ID=gene-IXO1088_017630;Name=IXO1088_017630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017630 CP040687.1 Protein Homology CDS 3626374 3627360 . - 0 ID=cds-QIE16730.1;Parent=gene-IXO1088_017630;Dbxref=NCBI_GP:QIE16730.1;Name=QIE16730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258453.1;locus_tag=IXO1088_017630;product=phage late control D family protein;protein_id=QIE16730.1;transl_table=11 CP040687.1 Genbank gene 3627357 3627758 . - . ID=gene-IXO1088_017635;Name=IXO1088_017635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017635 CP040687.1 Protein Homology CDS 3627357 3627758 . - 0 ID=cds-QIE16731.1;Parent=gene-IXO1088_017635;Dbxref=NCBI_GP:QIE16731.1;Name=QIE16731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258454.1;locus_tag=IXO1088_017635;product=phage tail protein;protein_id=QIE16731.1;transl_table=11 CP040687.1 Genbank gene 3627771 3630641 . - . ID=gene-IXO1088_017640;Name=IXO1088_017640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017640 CP040687.1 Protein Homology CDS 3627771 3630641 . - 0 ID=cds-QIE16732.1;Parent=gene-IXO1088_017640;Dbxref=NCBI_GP:QIE16732.1;Name=QIE16732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638340.1;locus_tag=IXO1088_017640;product=phage tail tape measure protein;protein_id=QIE16732.1;transl_table=11 CP040687.1 Genbank gene 3630674 3630787 . - . ID=gene-IXO1088_017645;Name=IXO1088_017645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017645 CP040687.1 Protein Homology CDS 3630674 3630787 . - 0 ID=cds-QIE16733.1;Parent=gene-IXO1088_017645;Dbxref=NCBI_GP:QIE16733.1;Name=QIE16733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638339.1;locus_tag=IXO1088_017645;product=GpE family phage tail protein;protein_id=QIE16733.1;transl_table=11 CP040687.1 Genbank gene 3630796 3631098 . - . ID=gene-IXO1088_017650;Name=IXO1088_017650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017650 CP040687.1 Protein Homology CDS 3630796 3631098 . - 0 ID=cds-QIE16734.1;Parent=gene-IXO1088_017650;Dbxref=NCBI_GP:QIE16734.1;Name=QIE16734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638338.1;locus_tag=IXO1088_017650;product=phage tail assembly protein;protein_id=QIE16734.1;transl_table=11 CP040687.1 Genbank gene 3631144 3631653 . - . ID=gene-IXO1088_017655;Name=IXO1088_017655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017655 CP040687.1 Protein Homology CDS 3631144 3631653 . - 0 ID=cds-QIE16735.1;Parent=gene-IXO1088_017655;Dbxref=NCBI_GP:QIE16735.1;Name=QIE16735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638337.1;locus_tag=IXO1088_017655;product=phage major tail tube protein;protein_id=QIE16735.1;transl_table=11 CP040687.1 Genbank gene 3631684 3632850 . - . ID=gene-IXO1088_017660;Name=IXO1088_017660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017660 CP040687.1 Protein Homology CDS 3631684 3632850 . - 0 ID=cds-QIE16736.1;Parent=gene-IXO1088_017660;Dbxref=NCBI_GP:QIE16736.1;Name=QIE16736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638336.1;locus_tag=IXO1088_017660;product=phage tail protein;protein_id=QIE16736.1;transl_table=11 CP040687.1 Genbank gene 3632862 3633221 . - . ID=gene-IXO1088_017665;Name=IXO1088_017665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017665 CP040687.1 Protein Homology CDS 3632862 3633221 . - 0 ID=cds-QIE16737.1;Parent=gene-IXO1088_017665;Dbxref=NCBI_GP:QIE16737.1;Name=QIE16737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638335.1;locus_tag=IXO1088_017665;product=baseplate assembly protein;protein_id=QIE16737.1;transl_table=11 CP040687.1 Genbank gene 3633218 3633781 . - . ID=gene-IXO1088_017670;Name=IXO1088_017670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017670 CP040687.1 Protein Homology CDS 3633218 3633781 . - 0 ID=cds-QIE16738.1;Parent=gene-IXO1088_017670;Dbxref=NCBI_GP:QIE16738.1;Name=QIE16738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638334.1;locus_tag=IXO1088_017670;product=phage baseplate assembly protein V;protein_id=QIE16738.1;transl_table=11 CP040687.1 Genbank gene 3633842 3634420 . - . ID=gene-IXO1088_017675;Name=IXO1088_017675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017675 CP040687.1 Protein Homology CDS 3633842 3634420 . - 0 ID=cds-QIE16739.1;Parent=gene-IXO1088_017675;Dbxref=NCBI_GP:QIE16739.1;Name=QIE16739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364050.1;locus_tag=IXO1088_017675;product=phage tail protein;protein_id=QIE16739.1;transl_table=11 CP040687.1 Genbank gene 3634430 3635935 . - . ID=gene-IXO1088_017680;Name=IXO1088_017680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017680 CP040687.1 Protein Homology CDS 3634430 3635935 . - 0 ID=cds-QIE16740.1;Parent=gene-IXO1088_017680;Dbxref=NCBI_GP:QIE16740.1;Name=QIE16740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364048.1;locus_tag=IXO1088_017680;product=tail fiber protein;protein_id=QIE16740.1;transl_table=11 CP040687.1 Genbank gene 3635945 3636490 . - . ID=gene-IXO1088_017685;Name=IXO1088_017685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017685 CP040687.1 Protein Homology CDS 3635945 3636490 . - 0 ID=cds-QIE16741.1;Parent=gene-IXO1088_017685;Dbxref=NCBI_GP:QIE16741.1;Name=QIE16741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118949.1;locus_tag=IXO1088_017685;product=phage tail protein I;protein_id=QIE16741.1;transl_table=11 CP040687.1 Genbank gene 3636483 3637373 . - . ID=gene-IXO1088_017690;Name=IXO1088_017690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017690 CP040687.1 Protein Homology CDS 3636483 3637373 . - 0 ID=cds-QIE16742.1;Parent=gene-IXO1088_017690;Dbxref=NCBI_GP:QIE16742.1;Name=QIE16742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638330.1;locus_tag=IXO1088_017690;product=baseplate assembly protein;protein_id=QIE16742.1;transl_table=11 CP040687.1 Genbank gene 3637650 3638282 . - . ID=gene-IXO1088_017695;Name=IXO1088_017695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017695 CP040687.1 Protein Homology CDS 3637650 3638282 . - 0 ID=cds-QIE16743.1;Parent=gene-IXO1088_017695;Dbxref=NCBI_GP:QIE16743.1;Name=QIE16743.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF09641.8;locus_tag=IXO1088_017695;product=DUF2026 domain-containing protein;protein_id=QIE16743.1;transl_table=11 CP040687.1 Genbank gene 3638558 3639004 . - . ID=gene-IXO1088_017700;Name=IXO1088_017700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017700 CP040687.1 Protein Homology CDS 3638558 3639004 . - 0 ID=cds-QIE16744.1;Parent=gene-IXO1088_017700;Dbxref=NCBI_GP:QIE16744.1;Name=QIE16744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348765.1;locus_tag=IXO1088_017700;product=phage virion morphogenesis protein;protein_id=QIE16744.1;transl_table=11 CP040687.1 Genbank gene 3638992 3639411 . - . ID=gene-IXO1088_017705;Name=IXO1088_017705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017705 CP040687.1 Protein Homology CDS 3638992 3639411 . - 0 ID=cds-QIE16745.1;Parent=gene-IXO1088_017705;Dbxref=NCBI_GP:QIE16745.1;Name=QIE16745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638328.1;locus_tag=IXO1088_017705;product=phage tail protein;protein_id=QIE16745.1;transl_table=11 CP040687.1 Genbank gene 3639408 3639896 . - . ID=gene-IXO1088_017710;Name=IXO1088_017710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017710 CP040687.1 Protein Homology CDS 3639408 3639896 . - 0 ID=cds-QIE16746.1;Parent=gene-IXO1088_017710;Dbxref=NCBI_GP:QIE16746.1;Name=QIE16746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638327.1;locus_tag=IXO1088_017710;product=hypothetical protein;protein_id=QIE16746.1;transl_table=11 CP040687.1 Genbank gene 3639896 3640537 . - . ID=gene-IXO1088_017715;Name=IXO1088_017715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017715 CP040687.1 Protein Homology CDS 3639896 3640537 . - 0 ID=cds-QIE16747.1;Parent=gene-IXO1088_017715;Dbxref=NCBI_GP:QIE16747.1;Name=QIE16747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258470.1;locus_tag=IXO1088_017715;product=glycoside hydrolase family 19 protein;protein_id=QIE16747.1;transl_table=11 CP040687.1 Genbank gene 3640534 3640809 . - . ID=gene-IXO1088_017720;Name=IXO1088_017720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017720 CP040687.1 Protein Homology CDS 3640534 3640809 . - 0 ID=cds-QIE16748.1;Parent=gene-IXO1088_017720;Dbxref=NCBI_GP:QIE16748.1;Name=QIE16748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638325.1;locus_tag=IXO1088_017720;product=phage holin family protein;protein_id=QIE16748.1;transl_table=11 CP040687.1 Genbank gene 3640802 3641158 . - . ID=gene-IXO1088_017725;Name=IXO1088_017725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017725 CP040687.1 Protein Homology CDS 3640802 3641158 . - 0 ID=cds-QIE16749.1;Parent=gene-IXO1088_017725;Dbxref=NCBI_GP:QIE16749.1;Name=QIE16749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638324.1;locus_tag=IXO1088_017725;product=hypothetical protein;protein_id=QIE16749.1;transl_table=11 CP040687.1 Genbank gene 3641163 3641372 . - . ID=gene-IXO1088_017730;Name=IXO1088_017730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017730 CP040687.1 Protein Homology CDS 3641163 3641372 . - 0 ID=cds-QIE16750.1;Parent=gene-IXO1088_017730;Dbxref=NCBI_GP:QIE16750.1;Name=QIE16750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638323.1;locus_tag=IXO1088_017730;product=phage tail protein;protein_id=QIE16750.1;transl_table=11 CP040687.1 Genbank gene 3641372 3641839 . - . ID=gene-IXO1088_017735;Name=IXO1088_017735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017735 CP040687.1 Protein Homology CDS 3641372 3641839 . - 0 ID=cds-QIE16751.1;Parent=gene-IXO1088_017735;Dbxref=NCBI_GP:QIE16751.1;Name=QIE16751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638322.1;locus_tag=IXO1088_017735;product=head completion/stabilization protein;protein_id=QIE16751.1;transl_table=11 CP040687.1 Genbank gene 3641939 3642658 . - . ID=gene-IXO1088_017740;Name=IXO1088_017740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017740 CP040687.1 Protein Homology CDS 3641939 3642658 . - 0 ID=cds-QIE16752.1;Parent=gene-IXO1088_017740;Dbxref=NCBI_GP:QIE16752.1;Name=QIE16752.1;Note=gpM%3B M protein%3B capsid packaging%3B M protein is probably the endonuclease subunit of the terminase complex%2C which directs cos cleavage of closed monomeric dsDNA circles into linear genomes with 19 nt cohesive ssDNA ends%3B Q%2C P and M proteins are needed to package DNA into capsid proheads and conversion into mature capsids;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638321.1;locus_tag=IXO1088_017740;product=terminase;protein_id=QIE16752.1;transl_table=11 CP040687.1 Genbank gene 3642662 3643678 . - . ID=gene-IXO1088_017745;Name=IXO1088_017745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017745 CP040687.1 Protein Homology CDS 3642662 3643678 . - 0 ID=cds-QIE16753.1;Parent=gene-IXO1088_017745;Dbxref=NCBI_GP:QIE16753.1;Name=QIE16753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638320.1;locus_tag=IXO1088_017745;product=phage major capsid protein%2C P2 family;protein_id=QIE16753.1;transl_table=11 CP040687.1 Genbank gene 3643725 3644567 . - . ID=gene-IXO1088_017750;Name=IXO1088_017750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017750 CP040687.1 Protein Homology CDS 3643725 3644567 . - 0 ID=cds-QIE16754.1;Parent=gene-IXO1088_017750;Dbxref=NCBI_GP:QIE16754.1;Name=QIE16754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638319.1;locus_tag=IXO1088_017750;product=GPO family capsid scaffolding protein;protein_id=QIE16754.1;transl_table=11 CP040687.1 Genbank gene 3644689 3646473 . + . ID=gene-IXO1088_017755;Name=IXO1088_017755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017755 CP040687.1 Protein Homology CDS 3644689 3646473 . + 0 ID=cds-QIE16755.1;Parent=gene-IXO1088_017755;Dbxref=NCBI_GP:QIE16755.1;Name=QIE16755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638318.1;locus_tag=IXO1088_017755;product=terminase ATPase subunit family protein;protein_id=QIE16755.1;transl_table=11 CP040687.1 Genbank gene 3646473 3647495 . + . ID=gene-IXO1088_017760;Name=IXO1088_017760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017760 CP040687.1 Protein Homology CDS 3646473 3647495 . + 0 ID=cds-QIE16756.1;Parent=gene-IXO1088_017760;Dbxref=NCBI_GP:QIE16756.1;Name=QIE16756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638317.1;locus_tag=IXO1088_017760;product=phage portal protein;protein_id=QIE16756.1;transl_table=11 CP040687.1 Genbank gene 3647521 3647766 . + . ID=gene-IXO1088_017765;Name=IXO1088_017765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017765 CP040687.1 Protein Homology CDS 3647521 3647766 . + 0 ID=cds-QIE16757.1;Parent=gene-IXO1088_017765;Dbxref=NCBI_GP:QIE16757.1;Name=QIE16757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638316.1;locus_tag=IXO1088_017765;product=Com family DNA-binding transcriptional regulator;protein_id=QIE16757.1;transl_table=11 CP040687.1 Genbank gene 3647684 3648394 . + . ID=gene-IXO1088_017770;Name=IXO1088_017770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017770 CP040687.1 Protein Homology CDS 3647684 3648394 . + 0 ID=cds-QIE16758.1;Parent=gene-IXO1088_017770;Dbxref=NCBI_GP:QIE16758.1;Name=QIE16758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408155.1;locus_tag=IXO1088_017770;product=site-specific DNA-methyltransferase;protein_id=QIE16758.1;transl_table=11 CP040687.1 Genbank gene 3648469 3649221 . - . ID=gene-IXO1088_017775;Name=IXO1088_017775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017775 CP040687.1 Protein Homology CDS 3648469 3649221 . - 0 ID=cds-QIE16759.1;Parent=gene-IXO1088_017775;Dbxref=NCBI_GP:QIE16759.1;Name=QIE16759.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF15579.4;locus_tag=IXO1088_017775;product=hypothetical protein;protein_id=QIE16759.1;transl_table=11 CP040687.1 Genbank gene 3649218 3649925 . - . ID=gene-IXO1088_017780;Name=IXO1088_017780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017780 CP040687.1 Protein Homology CDS 3649218 3649925 . - 0 ID=cds-QIE16760.1;Parent=gene-IXO1088_017780;Dbxref=NCBI_GP:QIE16760.1;Name=QIE16760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409848.1;locus_tag=IXO1088_017780;product=hypothetical protein;protein_id=QIE16760.1;transl_table=11 CP040687.1 Genbank gene 3649939 3650280 . - . ID=gene-IXO1088_017785;Name=IXO1088_017785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017785 CP040687.1 Protein Homology CDS 3649939 3650280 . - 0 ID=cds-QIE16761.1;Parent=gene-IXO1088_017785;Dbxref=NCBI_GP:QIE16761.1;Name=QIE16761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408158.1;locus_tag=IXO1088_017785;product=hypothetical protein;protein_id=QIE16761.1;transl_table=11 CP040687.1 Genbank gene 3650261 3650818 . - . ID=gene-IXO1088_017790;Name=IXO1088_017790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017790 CP040687.1 Protein Homology CDS 3650261 3650818 . - 0 ID=cds-QIE16762.1;Parent=gene-IXO1088_017790;Dbxref=NCBI_GP:QIE16762.1;Name=QIE16762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258481.1;locus_tag=IXO1088_017790;product=DUF4123 domain-containing protein;protein_id=QIE16762.1;transl_table=11 CP040687.1 Genbank gene 3650767 3651168 . - . ID=gene-IXO1088_017795;Name=IXO1088_017795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017795 CP040687.1 Protein Homology CDS 3650767 3651168 . - 0 ID=cds-QIE18056.1;Parent=gene-IXO1088_017795;Dbxref=NCBI_GP:QIE18056.1;Name=QIE18056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409850.1;locus_tag=IXO1088_017795;product=PAAR domain-containing protein;protein_id=QIE18056.1;transl_table=11 CP040687.1 Genbank pseudogene 3652132 3652747 . - . ID=gene-IXO1088_017800;Name=IXO1088_017800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_017800;pseudo=true CP040687.1 Protein Homology CDS 3652132 3652747 . - 0 ID=cds-IXO1088_017800;Parent=gene-IXO1088_017800;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638312.1;locus_tag=IXO1088_017800;product=DUF4113 domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3652907 3653095 . - . ID=gene-IXO1088_017805;Name=IXO1088_017805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017805 CP040687.1 Protein Homology CDS 3652907 3653095 . - 0 ID=cds-QIE16763.1;Parent=gene-IXO1088_017805;Dbxref=NCBI_GP:QIE16763.1;Name=QIE16763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009595750.1;locus_tag=IXO1088_017805;product=hypothetical protein;protein_id=QIE16763.1;transl_table=11 CP040687.1 Genbank gene 3653098 3654066 . + . ID=gene-IXO1088_017810;Name=IXO1088_017810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017810 CP040687.1 Protein Homology CDS 3653098 3654066 . + 0 ID=cds-QIE16764.1;Parent=gene-IXO1088_017810;Dbxref=NCBI_GP:QIE16764.1;Name=QIE16764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_017810;product=IS5-like element ISXo1 family transposase;protein_id=QIE16764.1;transl_table=11 CP040687.1 Genbank gene 3654553 3654628 . - . ID=gene-IXO1088_017815;Name=IXO1088_017815;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_017815 CP040687.1 cmsearch ncRNA 3654553 3654628 . - . ID=rna-IXO1088_017815;Parent=gene-IXO1088_017815;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_017815;product=sX9 sRNA CP040687.1 cmsearch exon 3654553 3654628 . - . ID=exon-IXO1088_017815-1;Parent=rna-IXO1088_017815;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_017815;product=sX9 sRNA CP040687.1 Genbank gene 3655062 3655637 . + . ID=gene-IXO1088_017820;Name=IXO1088_017820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017820 CP040687.1 Protein Homology CDS 3655062 3655637 . + 0 ID=cds-QIE16765.1;Parent=gene-IXO1088_017820;Dbxref=NCBI_GP:QIE16765.1;Name=QIE16765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445553.1;locus_tag=IXO1088_017820;product=dienelactone hydrolase family protein;protein_id=QIE16765.1;transl_table=11 CP040687.1 Genbank gene 3655634 3656068 . + . ID=gene-IXO1088_017825;Name=IXO1088_017825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017825 CP040687.1 Protein Homology CDS 3655634 3656068 . + 0 ID=cds-QIE16766.1;Parent=gene-IXO1088_017825;Dbxref=NCBI_GP:QIE16766.1;Name=QIE16766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503835.1;locus_tag=IXO1088_017825;product=HIT family protein;protein_id=QIE16766.1;transl_table=11 CP040687.1 Genbank gene 3656096 3656263 . + . ID=gene-IXO1088_017830;Name=IXO1088_017830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017830 CP040687.1 Protein Homology CDS 3656096 3656263 . + 0 ID=cds-QIE16767.1;Parent=gene-IXO1088_017830;Dbxref=NCBI_GP:QIE16767.1;Name=QIE16767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259782.1;locus_tag=IXO1088_017830;product=hypothetical protein;protein_id=QIE16767.1;transl_table=11 CP040687.1 Genbank gene 3656859 3657044 . + . ID=gene-IXO1088_017835;Name=IXO1088_017835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017835 CP040687.1 Protein Homology CDS 3656859 3657044 . + 0 ID=cds-QIE16768.1;Parent=gene-IXO1088_017835;Dbxref=NCBI_GP:QIE16768.1;Name=QIE16768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486896.1;locus_tag=IXO1088_017835;product=hypothetical protein;protein_id=QIE16768.1;transl_table=11 CP040687.1 Genbank gene 3657079 3657648 . - . ID=gene-IXO1088_017840;Name=IXO1088_017840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017840 CP040687.1 Protein Homology CDS 3657079 3657648 . - 0 ID=cds-QIE16769.1;Parent=gene-IXO1088_017840;Dbxref=NCBI_GP:QIE16769.1;Name=QIE16769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912996.1;locus_tag=IXO1088_017840;product=dCTP deaminase;protein_id=QIE16769.1;transl_table=11 CP040687.1 Genbank gene 3657741 3658592 . - . ID=gene-IXO1088_017845;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=IXO1088_017845 CP040687.1 Protein Homology CDS 3657741 3658592 . - 0 ID=cds-QIE16770.1;Parent=gene-IXO1088_017845;Dbxref=NCBI_GP:QIE16770.1;Name=QIE16770.1;gbkey=CDS;gene=apbC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637919.2;locus_tag=IXO1088_017845;product=iron-sulfur cluster carrier protein ApbC;protein_id=QIE16770.1;transl_table=11 CP040687.1 Genbank pseudogene 3658864 3659049 . - . ID=gene-IXO1088_017850;Name=IXO1088_017850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_017850;pseudo=true CP040687.1 Protein Homology CDS 3658864 3659049 . - 0 ID=cds-IXO1088_017850;Parent=gene-IXO1088_017850;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851239.1;locus_tag=IXO1088_017850;product=FAD-dependent oxidoreductase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3659060 3659755 . - . ID=gene-IXO1088_017855;Name=IXO1088_017855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_017855;pseudo=true CP040687.1 Protein Homology CDS 3659060 3659755 . - 0 ID=cds-IXO1088_017855;Parent=gene-IXO1088_017855;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1088_017855;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3659980 3661995 . + . ID=gene-IXO1088_017860;Name=IXO1088_017860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017860 CP040687.1 Protein Homology CDS 3659980 3661995 . + 0 ID=cds-QIE16771.1;Parent=gene-IXO1088_017860;Dbxref=NCBI_GP:QIE16771.1;Name=QIE16771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637924.1;locus_tag=IXO1088_017860;product=M13 family metallopeptidase;protein_id=QIE16771.1;transl_table=11 CP040687.1 Genbank gene 3662266 3662964 . - . ID=gene-IXO1088_017865;Name=IXO1088_017865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017865 CP040687.1 Protein Homology CDS 3662266 3662964 . - 0 ID=cds-QIE16772.1;Parent=gene-IXO1088_017865;Dbxref=NCBI_GP:QIE16772.1;Name=QIE16772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366739.1;locus_tag=IXO1088_017865;product=rhomboid family intramembrane serine protease;protein_id=QIE16772.1;transl_table=11 CP040687.1 Genbank gene 3663005 3663412 . - . ID=gene-IXO1088_017870;Name=IXO1088_017870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017870 CP040687.1 Protein Homology CDS 3663005 3663412 . - 0 ID=cds-QIE16773.1;Parent=gene-IXO1088_017870;Dbxref=NCBI_GP:QIE16773.1;Name=QIE16773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051802.1;locus_tag=IXO1088_017870;product=cysteine methyltransferase;protein_id=QIE16773.1;transl_table=11 CP040687.1 Genbank pseudogene 3663653 3663832 . - . ID=gene-IXO1088_017875;Name=IXO1088_017875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_017875;pseudo=true CP040687.1 Protein Homology CDS 3663653 3663832 . - 0 ID=cds-IXO1088_017875;Parent=gene-IXO1088_017875;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637927.1;locus_tag=IXO1088_017875;product=glutathione-disulfide reductase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3663850 3664812 . - . ID=gene-IXO1088_017880;Name=IXO1088_017880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017880 CP040687.1 Protein Homology CDS 3663850 3664812 . - 0 ID=cds-QIE16774.1;Parent=gene-IXO1088_017880;Dbxref=NCBI_GP:QIE16774.1;Name=QIE16774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259790.1;locus_tag=IXO1088_017880;product=IS1595 family transposase;protein_id=QIE16774.1;transl_table=11 CP040687.1 Genbank pseudogene 3664904 3666100 . - . ID=gene-IXO1088_017885;Name=IXO1088_017885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_017885;pseudo=true CP040687.1 Protein Homology CDS 3664904 3666100 . - 0 ID=cds-IXO1088_017885;Parent=gene-IXO1088_017885;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637927.1;locus_tag=IXO1088_017885;product=FAD-dependent oxidoreductase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3666097 3667347 . - . ID=gene-IXO1088_017890;Name=IXO1088_017890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017890 CP040687.1 Protein Homology CDS 3666097 3667347 . - 0 ID=cds-QIE16775.1;Parent=gene-IXO1088_017890;Dbxref=NCBI_GP:QIE16775.1;Name=QIE16775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377592.1;locus_tag=IXO1088_017890;product=FAD-dependent oxidoreductase;protein_id=QIE16775.1;transl_table=11 CP040687.1 Genbank gene 3667355 3668599 . - . ID=gene-IXO1088_017895;Name=IXO1088_017895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017895 CP040687.1 Protein Homology CDS 3667355 3668599 . - 0 ID=cds-QIE16776.1;Parent=gene-IXO1088_017895;Dbxref=NCBI_GP:QIE16776.1;Name=QIE16776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486872.1;locus_tag=IXO1088_017895;product=DUF418 domain-containing protein;protein_id=QIE16776.1;transl_table=11 CP040687.1 Genbank gene 3668827 3669306 . - . ID=gene-IXO1088_017900;Name=IXO1088_017900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017900 CP040687.1 Protein Homology CDS 3668827 3669306 . - 0 ID=cds-QIE16777.1;Parent=gene-IXO1088_017900;Dbxref=NCBI_GP:QIE16777.1;Name=QIE16777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637930.1;locus_tag=IXO1088_017900;product=peptidylprolyl isomerase;protein_id=QIE16777.1;transl_table=11 CP040687.1 Genbank gene 3669417 3669953 . + . ID=gene-IXO1088_017905;Name=IXO1088_017905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017905 CP040687.1 Protein Homology CDS 3669417 3669953 . + 0 ID=cds-QIE18057.1;Parent=gene-IXO1088_017905;Dbxref=NCBI_GP:QIE18057.1;Name=QIE18057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156384.1;locus_tag=IXO1088_017905;product=NlpC/P60 family protein;protein_id=QIE18057.1;transl_table=11 CP040687.1 Genbank gene 3670063 3670812 . + . ID=gene-IXO1088_017910;Name=IXO1088_017910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017910 CP040687.1 Protein Homology CDS 3670063 3670812 . + 0 ID=cds-QIE16778.1;Parent=gene-IXO1088_017910;Dbxref=NCBI_GP:QIE16778.1;Name=QIE16778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637932.1;locus_tag=IXO1088_017910;product=NlpC/P60 family protein;protein_id=QIE16778.1;transl_table=11 CP040687.1 Genbank gene 3671020 3671511 . - . ID=gene-IXO1088_017915;Name=IXO1088_017915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017915 CP040687.1 Protein Homology CDS 3671020 3671511 . - 0 ID=cds-QIE16779.1;Parent=gene-IXO1088_017915;Dbxref=NCBI_GP:QIE16779.1;Name=QIE16779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259797.1;locus_tag=IXO1088_017915;product=acyl-CoA thioesterase;protein_id=QIE16779.1;transl_table=11 CP040687.1 Genbank gene 3671524 3671751 . - . ID=gene-IXO1088_017920;Name=IXO1088_017920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017920 CP040687.1 Protein Homology CDS 3671524 3671751 . - 0 ID=cds-QIE16780.1;Parent=gene-IXO1088_017920;Dbxref=NCBI_GP:QIE16780.1;Name=QIE16780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116229.1;locus_tag=IXO1088_017920;product=hypothetical protein;protein_id=QIE16780.1;transl_table=11 CP040687.1 Genbank pseudogene 3671758 3672431 . - . ID=gene-IXO1088_017925;Name=IXO1088_017925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_017925;pseudo=true CP040687.1 Protein Homology CDS 3671758 3672431 . - 0 ID=cds-IXO1088_017925;Parent=gene-IXO1088_017925;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637943.1;locus_tag=IXO1088_017925;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3672625 3673944 . - . ID=gene-IXO1088_017930;Name=IXO1088_017930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017930 CP040687.1 Protein Homology CDS 3672625 3673944 . - 0 ID=cds-QIE16781.1;Parent=gene-IXO1088_017930;Dbxref=NCBI_GP:QIE16781.1;Name=QIE16781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409088.1;locus_tag=IXO1088_017930;product=dicarboxylate/amino acid:cation symporter;protein_id=QIE16781.1;transl_table=11 CP040687.1 Genbank gene 3674089 3675795 . + . ID=gene-IXO1088_017935;Name=IXO1088_017935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017935 CP040687.1 Protein Homology CDS 3674089 3675795 . + 0 ID=cds-QIE16782.1;Parent=gene-IXO1088_017935;Dbxref=NCBI_GP:QIE16782.1;Name=QIE16782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637945.1;locus_tag=IXO1088_017935;product=alkaline phosphatase;protein_id=QIE16782.1;transl_table=11 CP040687.1 Genbank gene 3675829 3677133 . + . ID=gene-IXO1088_017940;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=IXO1088_017940 CP040687.1 Protein Homology CDS 3675829 3677133 . + 0 ID=cds-QIE16783.1;Parent=gene-IXO1088_017940;Dbxref=NCBI_GP:QIE16783.1;Name=QIE16783.1;gbkey=CDS;gene=tilS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090562.1;locus_tag=IXO1088_017940;product=tRNA lysidine(34) synthetase TilS;protein_id=QIE16783.1;transl_table=11 CP040687.1 Genbank gene 3677165 3677425 . + . ID=gene-IXO1088_017945;Name=IXO1088_017945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017945 CP040687.1 Protein Homology CDS 3677165 3677425 . + 0 ID=cds-QIE16784.1;Parent=gene-IXO1088_017945;Dbxref=NCBI_GP:QIE16784.1;Name=QIE16784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637947.1;locus_tag=IXO1088_017945;product=exodeoxyribonuclease VII small subunit;protein_id=QIE16784.1;transl_table=11 CP040687.1 Genbank gene 3677427 3678302 . + . ID=gene-IXO1088_017950;Name=IXO1088_017950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017950 CP040687.1 Protein Homology CDS 3677427 3678302 . + 0 ID=cds-QIE18058.1;Parent=gene-IXO1088_017950;Dbxref=NCBI_GP:QIE18058.1;Name=QIE18058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637948.1;locus_tag=IXO1088_017950;product=polyprenyl synthetase family protein;protein_id=QIE18058.1;transl_table=11 CP040687.1 Genbank pseudogene 3678986 3680067 . + . ID=gene-IXO1088_017955;Name=IXO1088_017955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_017955;pseudo=true CP040687.1 Protein Homology CDS 3678986 3680067 . + 0 ID=cds-IXO1088_017955;Parent=gene-IXO1088_017955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508287.1;locus_tag=IXO1088_017955;product=protease;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3680137 3680601 . - . ID=gene-IXO1088_017960;Name=IXO1088_017960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017960 CP040687.1 Protein Homology CDS 3680137 3680601 . - 0 ID=cds-QIE18059.1;Parent=gene-IXO1088_017960;Dbxref=NCBI_GP:QIE18059.1;Name=QIE18059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112466.1;locus_tag=IXO1088_017960;product=DUF4870 domain-containing protein;protein_id=QIE18059.1;transl_table=11 CP040687.1 Genbank gene 3680653 3680841 . - . ID=gene-IXO1088_017965;Name=IXO1088_017965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017965 CP040687.1 Protein Homology CDS 3680653 3680841 . - 0 ID=cds-QIE16785.1;Parent=gene-IXO1088_017965;Dbxref=NCBI_GP:QIE16785.1;Name=QIE16785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502706.1;locus_tag=IXO1088_017965;product=DUF4870 domain-containing protein;protein_id=QIE16785.1;transl_table=11 CP040687.1 Genbank gene 3680814 3681134 . - . ID=gene-IXO1088_017970;Name=IXO1088_017970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017970 CP040687.1 GeneMarkS-2+ CDS 3680814 3681134 . - 0 ID=cds-QIE16786.1;Parent=gene-IXO1088_017970;Dbxref=NCBI_GP:QIE16786.1;Name=QIE16786.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_017970;product=DUF4870 domain-containing protein;protein_id=QIE16786.1;transl_table=11 CP040687.1 Genbank gene 3681131 3682498 . - . ID=gene-IXO1088_017975;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=IXO1088_017975 CP040687.1 Protein Homology CDS 3681131 3682498 . - 0 ID=cds-QIE16787.1;Parent=gene-IXO1088_017975;Dbxref=NCBI_GP:QIE16787.1;Name=QIE16787.1;gbkey=CDS;gene=pmbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019182615.1;locus_tag=IXO1088_017975;product=metalloprotease PmbA;protein_id=QIE16787.1;transl_table=11 CP040687.1 Genbank gene 3682644 3683225 . + . ID=gene-IXO1088_017980;Name=IXO1088_017980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017980 CP040687.1 Protein Homology CDS 3682644 3683225 . + 0 ID=cds-QIE16788.1;Parent=gene-IXO1088_017980;Dbxref=NCBI_GP:QIE16788.1;Name=QIE16788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637953.1;locus_tag=IXO1088_017980;product=ribosome-associated protein;protein_id=QIE16788.1;transl_table=11 CP040687.1 Genbank gene 3683482 3684927 . - . ID=gene-IXO1088_017985;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=IXO1088_017985 CP040687.1 Protein Homology CDS 3683482 3684927 . - 0 ID=cds-QIE16789.1;Parent=gene-IXO1088_017985;Dbxref=NCBI_GP:QIE16789.1;Name=QIE16789.1;gbkey=CDS;gene=tldD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637954.1;locus_tag=IXO1088_017985;product=metalloprotease TldD;protein_id=QIE16789.1;transl_table=11 CP040687.1 Genbank pseudogene 3685026 3685768 . + . ID=gene-IXO1088_017990;Name=IXO1088_017990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_017990;pseudo=true CP040687.1 Protein Homology CDS 3685026 3685768 . + 0 ID=cds-IXO1088_017990;Parent=gene-IXO1088_017990;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005919426.1;locus_tag=IXO1088_017990;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3685774 3689694 . - . ID=gene-IXO1088_017995;Name=IXO1088_017995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_017995 CP040687.1 Protein Homology CDS 3685774 3689694 . - 0 ID=cds-QIE16790.1;Parent=gene-IXO1088_017995;Dbxref=NCBI_GP:QIE16790.1;Name=QIE16790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051814.1;locus_tag=IXO1088_017995;product=TIGR02099 family protein;protein_id=QIE16790.1;transl_table=11 CP040687.1 Genbank gene 3689842 3691341 . - . ID=gene-IXO1088_018000;Name=IXO1088_018000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018000 CP040687.1 Protein Homology CDS 3689842 3691341 . - 0 ID=cds-QIE16791.1;Parent=gene-IXO1088_018000;Dbxref=NCBI_GP:QIE16791.1;Name=QIE16791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637957.1;locus_tag=IXO1088_018000;product=ribonuclease G;protein_id=QIE16791.1;transl_table=11 CP040687.1 Genbank gene 3691341 3691913 . - . ID=gene-IXO1088_018005;Name=IXO1088_018005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018005 CP040687.1 Protein Homology CDS 3691341 3691913 . - 0 ID=cds-QIE16792.1;Parent=gene-IXO1088_018005;Dbxref=NCBI_GP:QIE16792.1;Name=QIE16792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637958.1;locus_tag=IXO1088_018005;product=Maf-like protein;protein_id=QIE16792.1;transl_table=11 CP040687.1 Genbank gene 3692052 3692786 . + . ID=gene-IXO1088_018010;Name=IXO1088_018010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018010 CP040687.1 Protein Homology CDS 3692052 3692786 . + 0 ID=cds-QIE16793.1;Parent=gene-IXO1088_018010;Dbxref=NCBI_GP:QIE16793.1;Name=QIE16793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637959.1;locus_tag=IXO1088_018010;product=SIMPL domain-containing protein;protein_id=QIE16793.1;transl_table=11 CP040687.1 Genbank gene 3692920 3693888 . - . ID=gene-IXO1088_018015;Name=IXO1088_018015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018015 CP040687.1 Protein Homology CDS 3692920 3693888 . - 0 ID=cds-QIE16794.1;Parent=gene-IXO1088_018015;Dbxref=NCBI_GP:QIE16794.1;Name=QIE16794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_018015;product=IS5-like element ISXo1 family transposase;protein_id=QIE16794.1;transl_table=11 CP040687.1 Genbank gene 3694173 3694971 . + . ID=gene-IXO1088_018020;Name=IXO1088_018020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018020 CP040687.1 Protein Homology CDS 3694173 3694444 . + 0 ID=cds-QIE16795.1;Parent=gene-IXO1088_018020;Dbxref=NCBI_GP:QIE16795.1;Name=QIE16795.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_018020;product=IS5 family transposase;protein_id=QIE16795.1;transl_table=11 CP040687.1 Protein Homology CDS 3694443 3694971 . + 1 ID=cds-QIE16795.1;Parent=gene-IXO1088_018020;Dbxref=NCBI_GP:QIE16795.1;Name=QIE16795.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_018020;product=IS5 family transposase;protein_id=QIE16795.1;transl_table=11 CP040687.1 Genbank gene 3695045 3695122 . + . ID=gene-IXO1088_018025;Name=IXO1088_018025;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_018025 CP040687.1 cmsearch ncRNA 3695045 3695122 . + . ID=rna-IXO1088_018025;Parent=gene-IXO1088_018025;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_018025;product=sX9 sRNA CP040687.1 cmsearch exon 3695045 3695122 . + . ID=exon-IXO1088_018025-1;Parent=rna-IXO1088_018025;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_018025;product=sX9 sRNA CP040687.1 Genbank gene 3695270 3698383 . + . ID=gene-IXO1088_018030;Name=IXO1088_018030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018030 CP040687.1 Protein Homology CDS 3695270 3698383 . + 0 ID=cds-QIE16796.1;Parent=gene-IXO1088_018030;Dbxref=NCBI_GP:QIE16796.1;Name=QIE16796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377546.1;locus_tag=IXO1088_018030;product=TonB-dependent receptor;protein_id=QIE16796.1;transl_table=11 CP040687.1 Genbank pseudogene 3698694 3699363 . + . ID=gene-IXO1088_018035;Name=IXO1088_018035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018035;pseudo=true CP040687.1 Protein Homology CDS 3698694 3699363 . + 0 ID=cds-IXO1088_018035;Parent=gene-IXO1088_018035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637960.1;locus_tag=IXO1088_018035;product=energy transducer TonB;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3699650 3699725 . + . ID=gene-IXO1088_018040;Name=IXO1088_018040;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_018040 CP040687.1 cmsearch ncRNA 3699650 3699725 . + . ID=rna-IXO1088_018040;Parent=gene-IXO1088_018040;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_018040;product=sX9 sRNA CP040687.1 cmsearch exon 3699650 3699725 . + . ID=exon-IXO1088_018040-1;Parent=rna-IXO1088_018040;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_018040;product=sX9 sRNA CP040687.1 Genbank gene 3699799 3700269 . - . ID=gene-IXO1088_018045;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=IXO1088_018045 CP040687.1 Protein Homology CDS 3699799 3700269 . - 0 ID=cds-QIE18060.1;Parent=gene-IXO1088_018045;Dbxref=NCBI_GP:QIE18060.1;Name=QIE18060.1;gbkey=CDS;gene=rlmH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637961.1;locus_tag=IXO1088_018045;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=QIE18060.1;transl_table=11 CP040687.1 Genbank pseudogene 3700391 3700834 . + . ID=gene-IXO1088_018050;Name=IXO1088_018050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018050;pseudo=true CP040687.1 Protein Homology CDS 3700391 3700834 . + 0 ID=cds-IXO1088_018050;Parent=gene-IXO1088_018050;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637962.1;locus_tag=IXO1088_018050;product=DUF839 domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3700824 3701297 . + . ID=gene-IXO1088_018055;Name=IXO1088_018055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018055 CP040687.1 Protein Homology CDS 3700824 3701297 . + 0 ID=cds-QIE16797.1;Parent=gene-IXO1088_018055;Dbxref=NCBI_GP:QIE16797.1;Name=QIE16797.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF05787.11;locus_tag=IXO1088_018055;product=DUF839 domain-containing protein;protein_id=QIE16797.1;transl_table=11 CP040687.1 Genbank gene 3701355 3702470 . - . ID=gene-IXO1088_018060;Name=IXO1088_018060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018060 CP040687.1 Protein Homology CDS 3701355 3702470 . - 0 ID=cds-QIE16798.1;Parent=gene-IXO1088_018060;Dbxref=NCBI_GP:QIE16798.1;Name=QIE16798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445581.1;locus_tag=IXO1088_018060;product=J domain-containing protein;protein_id=QIE16798.1;transl_table=11 CP040687.1 Genbank gene 3702482 3702898 . - . ID=gene-IXO1088_018065;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=IXO1088_018065 CP040687.1 Protein Homology CDS 3702482 3702898 . - 0 ID=cds-QIE16799.1;Parent=gene-IXO1088_018065;Dbxref=NCBI_GP:QIE16799.1;Name=QIE16799.1;gbkey=CDS;gene=rsfS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259822.1;locus_tag=IXO1088_018065;product=ribosome silencing factor;protein_id=QIE16799.1;transl_table=11 CP040687.1 Genbank gene 3702955 3703854 . - . ID=gene-IXO1088_018070;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=IXO1088_018070 CP040687.1 Protein Homology CDS 3702955 3703854 . - 0 ID=cds-QIE16800.1;Parent=gene-IXO1088_018070;Dbxref=NCBI_GP:QIE16800.1;Name=QIE16800.1;gbkey=CDS;gene=nadD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157150.1;locus_tag=IXO1088_018070;product=nicotinate-nucleotide adenylyltransferase;protein_id=QIE16800.1;transl_table=11 CP040687.1 Genbank gene 3703851 3704879 . - . ID=gene-IXO1088_018075;Name=IXO1088_018075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018075 CP040687.1 Protein Homology CDS 3703851 3704879 . - 0 ID=cds-QIE16801.1;Parent=gene-IXO1088_018075;Dbxref=NCBI_GP:QIE16801.1;Name=QIE16801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637965.1;locus_tag=IXO1088_018075;product=DNA polymerase III subunit delta;protein_id=QIE16801.1;transl_table=11 CP040687.1 Genbank gene 3704902 3705537 . - . ID=gene-IXO1088_018080;Name=IXO1088_018080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018080 CP040687.1 Protein Homology CDS 3704902 3705537 . - 0 ID=cds-QIE16802.1;Parent=gene-IXO1088_018080;Dbxref=NCBI_GP:QIE16802.1;Name=QIE16802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162628.1;locus_tag=IXO1088_018080;product=hypothetical protein;protein_id=QIE16802.1;transl_table=11 CP040687.1 Genbank pseudogene 3705534 3705950 . - . ID=gene-IXO1088_018085;Name=IXO1088_018085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018085;pseudo=true CP040687.1 Protein Homology CDS 3705534 3705950 . - 0 ID=cds-IXO1088_018085;Parent=gene-IXO1088_018085;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377532.1;locus_tag=IXO1088_018085;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3706051 3708693 . - . ID=gene-IXO1088_018090;Name=IXO1088_018090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018090 CP040687.1 Protein Homology CDS 3706051 3708693 . - 0 ID=cds-QIE16803.1;Parent=gene-IXO1088_018090;Dbxref=NCBI_GP:QIE16803.1;Name=QIE16803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972619.1;locus_tag=IXO1088_018090;product=leucine--tRNA ligase;protein_id=QIE16803.1;transl_table=11 CP040687.1 Genbank gene 3708766 3709377 . - . ID=gene-IXO1088_018095;Name=IXO1088_018095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018095 CP040687.1 Protein Homology CDS 3708766 3709377 . - 0 ID=cds-QIE16804.1;Parent=gene-IXO1088_018095;Dbxref=NCBI_GP:QIE16804.1;Name=QIE16804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502688.1;locus_tag=IXO1088_018095;product=DUF998 domain-containing protein;protein_id=QIE16804.1;transl_table=11 CP040687.1 Genbank gene 3709582 3710439 . + . ID=gene-IXO1088_018100;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=IXO1088_018100 CP040687.1 Protein Homology CDS 3709582 3710439 . + 0 ID=cds-QIE16805.1;Parent=gene-IXO1088_018100;Dbxref=NCBI_GP:QIE16805.1;Name=QIE16805.1;gbkey=CDS;gene=trxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637970.1;locus_tag=IXO1088_018100;product=thioredoxin;protein_id=QIE16805.1;transl_table=11 CP040687.1 Genbank gene 3710695 3711144 . + . ID=gene-IXO1088_018105;Name=IXO1088_018105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018105 CP040687.1 Protein Homology CDS 3710695 3711144 . + 0 ID=cds-QIE16806.1;Parent=gene-IXO1088_018105;Dbxref=NCBI_GP:QIE16806.1;Name=QIE16806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637971.1;locus_tag=IXO1088_018105;product=DUF4442 domain-containing protein;protein_id=QIE16806.1;transl_table=11 CP040687.1 Genbank gene 3711444 3712409 . - . ID=gene-IXO1088_018110;Name=IXO1088_018110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018110 CP040687.1 Protein Homology CDS 3711444 3712409 . - 0 ID=cds-QIE16807.1;Parent=gene-IXO1088_018110;Dbxref=NCBI_GP:QIE16807.1;Name=QIE16807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_018110;product=IS1595-like element ISXo5 family transposase;protein_id=QIE16807.1;transl_table=11 CP040687.1 Genbank gene 3712534 3713297 . + . ID=gene-IXO1088_018115;Name=IXO1088_018115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018115 CP040687.1 Protein Homology CDS 3712534 3712849 . + 0 ID=cds-QIE16808.1;Parent=gene-IXO1088_018115;Dbxref=NCBI_GP:QIE16808.1;Name=QIE16808.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_018115;product=IS5 family transposase;protein_id=QIE16808.1;transl_table=11 CP040687.1 Protein Homology CDS 3712849 3713297 . + 2 ID=cds-QIE16808.1;Parent=gene-IXO1088_018115;Dbxref=NCBI_GP:QIE16808.1;Name=QIE16808.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_018115;product=IS5 family transposase;protein_id=QIE16808.1;transl_table=11 CP040687.1 Genbank gene 3713907 3714200 . + . ID=gene-IXO1088_018120;Name=IXO1088_018120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018120 CP040687.1 Protein Homology CDS 3713907 3714200 . + 0 ID=cds-QIE16809.1;Parent=gene-IXO1088_018120;Dbxref=NCBI_GP:QIE16809.1;Name=QIE16809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366835.1;locus_tag=IXO1088_018120;product=hypothetical protein;protein_id=QIE16809.1;transl_table=11 CP040687.1 Genbank gene 3714674 3714907 . + . ID=gene-IXO1088_018125;Name=IXO1088_018125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018125 CP040687.1 Protein Homology CDS 3714674 3714907 . + 0 ID=cds-QIE16810.1;Parent=gene-IXO1088_018125;Dbxref=NCBI_GP:QIE16810.1;Name=QIE16810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051827.1;locus_tag=IXO1088_018125;product=DUF378 domain-containing protein;protein_id=QIE16810.1;transl_table=11 CP040687.1 Genbank gene 3714941 3715954 . + . ID=gene-IXO1088_018130;Name=IXO1088_018130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018130 CP040687.1 Protein Homology CDS 3714941 3715954 . + 0 ID=cds-QIE16811.1;Parent=gene-IXO1088_018130;Dbxref=NCBI_GP:QIE16811.1;Name=QIE16811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502684.1;locus_tag=IXO1088_018130;product=peptidylprolyl isomerase;protein_id=QIE16811.1;transl_table=11 CP040687.1 Genbank gene 3715922 3716113 . - . ID=gene-IXO1088_018135;Name=IXO1088_018135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018135 CP040687.1 Protein Homology CDS 3715922 3716113 . - 0 ID=cds-QIE16812.1;Parent=gene-IXO1088_018135;Dbxref=NCBI_GP:QIE16812.1;Name=QIE16812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259831.1;locus_tag=IXO1088_018135;product=hypothetical protein;protein_id=QIE16812.1;transl_table=11 CP040687.1 Genbank gene 3716134 3717522 . - . ID=gene-IXO1088_018140;Name=IXO1088_018140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018140 CP040687.1 Protein Homology CDS 3716134 3717522 . - 0 ID=cds-QIE16813.1;Parent=gene-IXO1088_018140;Dbxref=NCBI_GP:QIE16813.1;Name=QIE16813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408780.1;locus_tag=IXO1088_018140;product=IS701 family transposase;protein_id=QIE16813.1;transl_table=11 CP040687.1 Genbank gene 3717610 3718824 . - . ID=gene-IXO1088_018145;Name=IXO1088_018145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018145 CP040687.1 Protein Homology CDS 3717610 3718824 . - 0 ID=cds-QIE16814.1;Parent=gene-IXO1088_018145;Dbxref=NCBI_GP:QIE16814.1;Name=QIE16814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1088_018145;product=IS4-like element ISXo14 family transposase;protein_id=QIE16814.1;transl_table=11 CP040687.1 Genbank pseudogene 3718861 3718941 . + . ID=gene-IXO1088_018150;Name=IXO1088_018150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018150;pseudo=true CP040687.1 Protein Homology CDS 3718861 3718941 . + 0 ID=cds-IXO1088_018150;Parent=gene-IXO1088_018150;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257538.1;locus_tag=IXO1088_018150;product=alcohol dehydrogenase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3719187 3720143 . + . ID=gene-IXO1088_018155;Name=IXO1088_018155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018155 CP040687.1 Protein Homology CDS 3719187 3720143 . + 0 ID=cds-QIE16815.1;Parent=gene-IXO1088_018155;Dbxref=NCBI_GP:QIE16815.1;Name=QIE16815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=IXO1088_018155;product=IS30-like element IS1112a family transposase;protein_id=QIE16815.1;transl_table=11 CP040687.1 Genbank gene 3720175 3721410 . - . ID=gene-IXO1088_018160;Name=IXO1088_018160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018160 CP040687.1 Protein Homology CDS 3720175 3721410 . - 0 ID=cds-QIE16816.1;Parent=gene-IXO1088_018160;Dbxref=NCBI_GP:QIE16816.1;Name=QIE16816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1088_018160;product=ISL3-like element ISXoo13 family transposase;protein_id=QIE16816.1;transl_table=11 CP040687.1 Genbank gene 3721539 3722507 . - . ID=gene-IXO1088_018165;Name=IXO1088_018165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018165 CP040687.1 Protein Homology CDS 3721539 3722507 . - 0 ID=cds-QIE16817.1;Parent=gene-IXO1088_018165;Dbxref=NCBI_GP:QIE16817.1;Name=QIE16817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_018165;product=IS5-like element ISXo1 family transposase;protein_id=QIE16817.1;transl_table=11 CP040687.1 Genbank gene 3722608 3723564 . - . ID=gene-IXO1088_018170;Name=IXO1088_018170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018170 CP040687.1 Protein Homology CDS 3722608 3723564 . - 0 ID=cds-QIE16818.1;Parent=gene-IXO1088_018170;Dbxref=NCBI_GP:QIE16818.1;Name=QIE16818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1088_018170;product=IS30-like element IS1112b family transposase;protein_id=QIE16818.1;transl_table=11 CP040687.1 Genbank gene 3723558 3724094 . + . ID=gene-IXO1088_018175;Name=IXO1088_018175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018175 CP040687.1 Protein Homology CDS 3723558 3724094 . + 0 ID=cds-QIE16819.1;Parent=gene-IXO1088_018175;Dbxref=NCBI_GP:QIE16819.1;Name=QIE16819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259834.1;locus_tag=IXO1088_018175;product=hypothetical protein;protein_id=QIE16819.1;transl_table=11 CP040687.1 Genbank gene 3724091 3725056 . - . ID=gene-IXO1088_018180;Name=IXO1088_018180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018180 CP040687.1 Protein Homology CDS 3724091 3725056 . - 0 ID=cds-QIE16820.1;Parent=gene-IXO1088_018180;Dbxref=NCBI_GP:QIE16820.1;Name=QIE16820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_018180;product=IS1595-like element ISXo5 family transposase;protein_id=QIE16820.1;transl_table=11 CP040687.1 Genbank gene 3725297 3726060 . + . ID=gene-IXO1088_018185;Name=IXO1088_018185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018185 CP040687.1 Protein Homology CDS 3725297 3725612 . + 0 ID=cds-QIE16821.1;Parent=gene-IXO1088_018185;Dbxref=NCBI_GP:QIE16821.1;Name=QIE16821.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_018185;product=IS5 family transposase;protein_id=QIE16821.1;transl_table=11 CP040687.1 Protein Homology CDS 3725612 3726060 . + 2 ID=cds-QIE16821.1;Parent=gene-IXO1088_018185;Dbxref=NCBI_GP:QIE16821.1;Name=QIE16821.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_018185;product=IS5 family transposase;protein_id=QIE16821.1;transl_table=11 CP040687.1 Genbank gene 3726362 3728494 . + . ID=gene-IXO1088_018190;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=IXO1088_018190 CP040687.1 Protein Homology CDS 3726362 3728494 . + 0 ID=cds-QIE16822.1;Parent=gene-IXO1088_018190;Dbxref=NCBI_GP:QIE16822.1;Name=QIE16822.1;gbkey=CDS;gene=glgX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172327.1;locus_tag=IXO1088_018190;product=glycogen debranching protein GlgX;protein_id=QIE16822.1;transl_table=11 CP040687.1 Genbank gene 3729045 3730013 . - . ID=gene-IXO1088_018195;Name=IXO1088_018195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018195 CP040687.1 Protein Homology CDS 3729045 3730013 . - 0 ID=cds-QIE16823.1;Parent=gene-IXO1088_018195;Dbxref=NCBI_GP:QIE16823.1;Name=QIE16823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_018195;product=IS5-like element ISXo1 family transposase;protein_id=QIE16823.1;transl_table=11 CP040687.1 Genbank pseudogene 3730016 3730093 . + . ID=gene-IXO1088_018200;Name=IXO1088_018200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018200;pseudo=true CP040687.1 Protein Homology CDS 3730016 3730093 . + 0 ID=cds-IXO1088_018200;Parent=gene-IXO1088_018200;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258967.1;locus_tag=IXO1088_018200;product=glyoxalase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3730158 3730805 . + . ID=gene-IXO1088_018205;Name=IXO1088_018205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018205;pseudo=true CP040687.1 Protein Homology CDS 3730158 3730805 . + 0 ID=cds-IXO1088_018205;Parent=gene-IXO1088_018205;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_018205;product=IS1595 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3730814 3731770 . - . ID=gene-IXO1088_018210;Name=IXO1088_018210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018210 CP040687.1 Protein Homology CDS 3730814 3731770 . - 0 ID=cds-QIE16824.1;Parent=gene-IXO1088_018210;Dbxref=NCBI_GP:QIE16824.1;Name=QIE16824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1088_018210;product=IS30-like element IS1112b family transposase;protein_id=QIE16824.1;transl_table=11 CP040687.1 Genbank gene 3732058 3732522 . - . ID=gene-IXO1088_018215;Name=IXO1088_018215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018215 CP040687.1 Protein Homology CDS 3732058 3732522 . - 0 ID=cds-QIE16825.1;Parent=gene-IXO1088_018215;Dbxref=NCBI_GP:QIE16825.1;Name=QIE16825.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF15428.4;locus_tag=IXO1088_018215;product=phosphotriesterase;protein_id=QIE16825.1;transl_table=11 CP040687.1 Genbank pseudogene 3732903 3737201 . - . ID=gene-IXO1088_018220;Name=IXO1088_018220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018220;pseudo=true CP040687.1 Protein Homology CDS 3732903 3737201 . - 0 ID=cds-IXO1088_018220;Parent=gene-IXO1088_018220;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444473.1;locus_tag=IXO1088_018220;product=type IV secretion protein Rhs;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3737345 3738964 . - . ID=gene-IXO1088_018225;Name=IXO1088_018225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018225 CP040687.1 Protein Homology CDS 3737345 3738964 . - 0 ID=cds-QIE16826.1;Parent=gene-IXO1088_018225;Dbxref=NCBI_GP:QIE16826.1;Name=QIE16826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003472136.1;locus_tag=IXO1088_018225;product=hypothetical protein;protein_id=QIE16826.1;transl_table=11 CP040687.1 Genbank gene 3738988 3741234 . - . ID=gene-IXO1088_018230;Name=tssI;gbkey=Gene;gene=tssI;gene_biotype=protein_coding;locus_tag=IXO1088_018230 CP040687.1 Protein Homology CDS 3738988 3741234 . - 0 ID=cds-QIE18061.1;Parent=gene-IXO1088_018230;Dbxref=NCBI_GP:QIE18061.1;Name=QIE18061.1;gbkey=CDS;gene=tssI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003472137.1;locus_tag=IXO1088_018230;product=type VI secretion system tip protein VgrG;protein_id=QIE18061.1;transl_table=11 CP040687.1 Genbank gene 3741459 3743156 . - . ID=gene-IXO1088_018235;Name=IXO1088_018235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018235 CP040687.1 Protein Homology CDS 3741459 3743156 . - 0 ID=cds-QIE18062.1;Parent=gene-IXO1088_018235;Dbxref=NCBI_GP:QIE18062.1;Name=QIE18062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636537.1;locus_tag=IXO1088_018235;product=M61 family metallopeptidase;protein_id=QIE18062.1;transl_table=11 CP040687.1 Genbank gene 3743506 3743841 . - . ID=gene-IXO1088_018240;Name=cyoD;gbkey=Gene;gene=cyoD;gene_biotype=protein_coding;locus_tag=IXO1088_018240 CP040687.1 Protein Homology CDS 3743506 3743841 . - 0 ID=cds-QIE16827.1;Parent=gene-IXO1088_018240;Dbxref=NCBI_GP:QIE16827.1;Name=QIE16827.1;gbkey=CDS;gene=cyoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636536.1;locus_tag=IXO1088_018240;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=QIE16827.1;transl_table=11 CP040687.1 Genbank gene 3743841 3744467 . - . ID=gene-IXO1088_018245;Name=cyoC;gbkey=Gene;gene=cyoC;gene_biotype=protein_coding;locus_tag=IXO1088_018245 CP040687.1 Protein Homology CDS 3743841 3744467 . - 0 ID=cds-QIE16828.1;Parent=gene-IXO1088_018245;Dbxref=NCBI_GP:QIE16828.1;Name=QIE16828.1;gbkey=CDS;gene=cyoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636535.1;locus_tag=IXO1088_018245;product=cytochrome o ubiquinol oxidase subunit III;protein_id=QIE16828.1;transl_table=11 CP040687.1 Genbank gene 3744470 3746470 . - . ID=gene-IXO1088_018250;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=IXO1088_018250 CP040687.1 Protein Homology CDS 3744470 3746470 . - 0 ID=cds-QIE16829.1;Parent=gene-IXO1088_018250;Dbxref=NCBI_GP:QIE16829.1;Name=QIE16829.1;gbkey=CDS;gene=cyoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636534.1;locus_tag=IXO1088_018250;product=cytochrome o ubiquinol oxidase subunit I;protein_id=QIE16829.1;transl_table=11 CP040687.1 Genbank gene 3746470 3747405 . - . ID=gene-IXO1088_018255;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=IXO1088_018255 CP040687.1 Protein Homology CDS 3746470 3747405 . - 0 ID=cds-QIE16830.1;Parent=gene-IXO1088_018255;Dbxref=NCBI_GP:QIE16830.1;Name=QIE16830.1;gbkey=CDS;gene=cyoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300511.1;locus_tag=IXO1088_018255;product=ubiquinol oxidase subunit II;protein_id=QIE16830.1;transl_table=11 CP040687.1 Genbank gene 3747767 3747842 . - . ID=gene-IXO1088_018260;Name=IXO1088_018260;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_018260 CP040687.1 tRNAscan-SE tRNA 3747767 3747842 . - . ID=rna-IXO1088_018260;Parent=gene-IXO1088_018260;anticodon=(pos:complement(3747807..3747809));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_018260;product=tRNA-Thr CP040687.1 tRNAscan-SE exon 3747767 3747842 . - . ID=exon-IXO1088_018260-1;Parent=rna-IXO1088_018260;anticodon=(pos:complement(3747807..3747809));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_018260;product=tRNA-Thr CP040687.1 Genbank gene 3747919 3748869 . - . ID=gene-IXO1088_018265;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=IXO1088_018265 CP040687.1 Protein Homology CDS 3747919 3748869 . - 0 ID=cds-QIE16831.1;Parent=gene-IXO1088_018265;Dbxref=NCBI_GP:QIE16831.1;Name=QIE16831.1;gbkey=CDS;gene=ispH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258401.1;locus_tag=IXO1088_018265;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=QIE16831.1;transl_table=11 CP040687.1 Genbank gene 3748958 3749458 . - . ID=gene-IXO1088_018270;Name=IXO1088_018270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018270 CP040687.1 Protein Homology CDS 3748958 3749458 . - 0 ID=cds-QIE16832.1;Parent=gene-IXO1088_018270;Dbxref=NCBI_GP:QIE16832.1;Name=QIE16832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304369.1;locus_tag=IXO1088_018270;product=lipoprotein signal peptidase;protein_id=QIE16832.1;transl_table=11 CP040687.1 Genbank gene 3749773 3752604 . - . ID=gene-IXO1088_018275;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=IXO1088_018275 CP040687.1 Protein Homology CDS 3749773 3752604 . - 0 ID=cds-QIE16833.1;Parent=gene-IXO1088_018275;Dbxref=NCBI_GP:QIE16833.1;Name=QIE16833.1;gbkey=CDS;gene=ileS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636530.1;locus_tag=IXO1088_018275;product=isoleucine--tRNA ligase;protein_id=QIE16833.1;transl_table=11 CP040687.1 Genbank gene 3752611 3753627 . - . ID=gene-IXO1088_018280;Name=IXO1088_018280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018280 CP040687.1 Protein Homology CDS 3752611 3753627 . - 0 ID=cds-QIE16834.1;Parent=gene-IXO1088_018280;Dbxref=NCBI_GP:QIE16834.1;Name=QIE16834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165409.1;locus_tag=IXO1088_018280;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=QIE16834.1;transl_table=11 CP040687.1 Genbank gene 3753826 3755430 . - . ID=gene-IXO1088_018285;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=IXO1088_018285 CP040687.1 Protein Homology CDS 3753826 3755430 . - 0 ID=cds-QIE18063.1;Parent=gene-IXO1088_018285;Dbxref=NCBI_GP:QIE18063.1;Name=QIE18063.1;gbkey=CDS;gene=murJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158642.1;locus_tag=IXO1088_018285;product=murein biosynthesis integral membrane protein MurJ;protein_id=QIE18063.1;transl_table=11 CP040687.1 Genbank gene 3755547 3755816 . + . ID=gene-IXO1088_018290;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=IXO1088_018290 CP040687.1 Protein Homology CDS 3755547 3755816 . + 0 ID=cds-QIE16835.1;Parent=gene-IXO1088_018290;Dbxref=NCBI_GP:QIE16835.1;Name=QIE16835.1;gbkey=CDS;gene=rpsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636527.1;locus_tag=IXO1088_018290;product=30S ribosomal protein S20;protein_id=QIE16835.1;transl_table=11 CP040687.1 Genbank gene 3755908 3756960 . - . ID=gene-IXO1088_018295;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=IXO1088_018295 CP040687.1 Protein Homology CDS 3755908 3756960 . - 0 ID=cds-QIE16836.1;Parent=gene-IXO1088_018295;Dbxref=NCBI_GP:QIE16836.1;Name=QIE16836.1;gbkey=CDS;gene=obgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636526.1;locus_tag=IXO1088_018295;product=GTPase ObgE;protein_id=QIE16836.1;transl_table=11 CP040687.1 Genbank gene 3757193 3757453 . - . ID=gene-IXO1088_018300;Name=IXO1088_018300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018300 CP040687.1 Protein Homology CDS 3757193 3757453 . - 0 ID=cds-QIE16837.1;Parent=gene-IXO1088_018300;Dbxref=NCBI_GP:QIE16837.1;Name=QIE16837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013534652.1;locus_tag=IXO1088_018300;product=50S ribosomal protein L27;protein_id=QIE16837.1;transl_table=11 CP040687.1 Genbank gene 3757466 3757786 . - . ID=gene-IXO1088_018305;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=IXO1088_018305 CP040687.1 Protein Homology CDS 3757466 3757786 . - 0 ID=cds-QIE16838.1;Parent=gene-IXO1088_018305;Dbxref=NCBI_GP:QIE16838.1;Name=QIE16838.1;gbkey=CDS;gene=rplU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636524.1;locus_tag=IXO1088_018305;product=50S ribosomal protein L21;protein_id=QIE16838.1;transl_table=11 CP040687.1 Genbank gene 3758079 3761045 . + . ID=gene-IXO1088_018310;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=IXO1088_018310 CP040687.1 Protein Homology CDS 3758079 3761045 . + 0 ID=cds-QIE16839.1;Parent=gene-IXO1088_018310;Dbxref=NCBI_GP:QIE16839.1;Name=QIE16839.1;gbkey=CDS;gene=uvrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636523.1;locus_tag=IXO1088_018310;product=excinuclease ABC subunit UvrA;protein_id=QIE16839.1;transl_table=11 CP040687.1 Genbank gene 3761042 3761449 . + . ID=gene-IXO1088_018315;Name=IXO1088_018315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018315 CP040687.1 Protein Homology CDS 3761042 3761449 . + 0 ID=cds-QIE16840.1;Parent=gene-IXO1088_018315;Dbxref=NCBI_GP:QIE16840.1;Name=QIE16840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017912417.1;locus_tag=IXO1088_018315;product=acyl-CoA thioesterase;protein_id=QIE16840.1;transl_table=11 CP040687.1 Genbank gene 3761563 3762027 . - . ID=gene-IXO1088_018320;Name=IXO1088_018320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018320 CP040687.1 Protein Homology CDS 3761563 3762027 . - 0 ID=cds-QIE16841.1;Parent=gene-IXO1088_018320;Dbxref=NCBI_GP:QIE16841.1;Name=QIE16841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258392.1;locus_tag=IXO1088_018320;product=copper chaperone PCu(A)C;protein_id=QIE16841.1;transl_table=11 CP040687.1 Genbank gene 3762051 3762821 . + . ID=gene-IXO1088_018325;Name=IXO1088_018325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018325 CP040687.1 Protein Homology CDS 3762051 3762821 . + 0 ID=cds-QIE16842.1;Parent=gene-IXO1088_018325;Dbxref=NCBI_GP:QIE16842.1;Name=QIE16842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636521.1;locus_tag=IXO1088_018325;product=enoyl-CoA hydratase/isomerase family protein;protein_id=QIE16842.1;transl_table=11 CP040687.1 Genbank gene 3762892 3763797 . + . ID=gene-IXO1088_018330;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=IXO1088_018330 CP040687.1 Protein Homology CDS 3762892 3763797 . + 0 ID=cds-QIE16843.1;Parent=gene-IXO1088_018330;Dbxref=NCBI_GP:QIE16843.1;Name=QIE16843.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636520.1;locus_tag=IXO1088_018330;product=acyl-CoA thioesterase II;protein_id=QIE16843.1;transl_table=11 CP040687.1 Genbank gene 3764025 3764528 . + . ID=gene-IXO1088_018335;Name=IXO1088_018335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018335 CP040687.1 Protein Homology CDS 3764025 3764528 . + 0 ID=cds-QIE16844.1;Parent=gene-IXO1088_018335;Dbxref=NCBI_GP:QIE16844.1;Name=QIE16844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156570.1;locus_tag=IXO1088_018335;product=DUF2007 domain-containing protein;protein_id=QIE16844.1;transl_table=11 CP040687.1 Genbank gene 3764640 3765383 . + . ID=gene-IXO1088_018340;Name=IXO1088_018340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018340 CP040687.1 Protein Homology CDS 3764640 3765383 . + 0 ID=cds-QIE16845.1;Parent=gene-IXO1088_018340;Dbxref=NCBI_GP:QIE16845.1;Name=QIE16845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504285.1;locus_tag=IXO1088_018340;product=sigma-70 family RNA polymerase sigma factor;protein_id=QIE16845.1;transl_table=11 CP040687.1 Genbank gene 3765638 3766093 . + . ID=gene-IXO1088_018345;Name=IXO1088_018345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018345 CP040687.1 Protein Homology CDS 3765638 3766093 . + 0 ID=cds-QIE18064.1;Parent=gene-IXO1088_018345;Dbxref=NCBI_GP:QIE18064.1;Name=QIE18064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116692.1;locus_tag=IXO1088_018345;product=hypothetical protein;protein_id=QIE18064.1;transl_table=11 CP040687.1 Genbank gene 3766227 3766808 . - . ID=gene-IXO1088_018350;Name=IXO1088_018350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018350 CP040687.1 Protein Homology CDS 3766227 3766808 . - 0 ID=cds-QIE16846.1;Parent=gene-IXO1088_018350;Dbxref=NCBI_GP:QIE16846.1;Name=QIE16846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156567.1;locus_tag=IXO1088_018350;product=calcium-binding protein;protein_id=QIE16846.1;transl_table=11 CP040687.1 Genbank gene 3767028 3767783 . + . ID=gene-IXO1088_018355;Name=IXO1088_018355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018355 CP040687.1 Protein Homology CDS 3767028 3767783 . + 0 ID=cds-QIE16847.1;Parent=gene-IXO1088_018355;Dbxref=NCBI_GP:QIE16847.1;Name=QIE16847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258385.1;locus_tag=IXO1088_018355;product=arginyltransferase;protein_id=QIE16847.1;transl_table=11 CP040687.1 Genbank gene 3767737 3769068 . + . ID=gene-IXO1088_018360;Name=IXO1088_018360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018360 CP040687.1 Protein Homology CDS 3767737 3769068 . + 0 ID=cds-QIE16848.1;Parent=gene-IXO1088_018360;Dbxref=NCBI_GP:QIE16848.1;Name=QIE16848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371500.1;locus_tag=IXO1088_018360;product=endonuclease/exonuclease/phosphatase family protein;protein_id=QIE16848.1;transl_table=11 CP040687.1 Genbank pseudogene 3769075 3769287 . - . ID=gene-IXO1088_018365;Name=IXO1088_018365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018365;pseudo=true CP040687.1 Protein Homology CDS 3769075 3769287 . - 0 ID=cds-IXO1088_018365;Parent=gene-IXO1088_018365;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_018365;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3769373 3770974 . - . ID=gene-IXO1088_018370;Name=IXO1088_018370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018370 CP040687.1 Protein Homology CDS 3769373 3770974 . - 0 ID=cds-QIE16849.1;Parent=gene-IXO1088_018370;Dbxref=NCBI_GP:QIE16849.1;Name=QIE16849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156983.1;locus_tag=IXO1088_018370;product=hypothetical protein;protein_id=QIE16849.1;transl_table=11 CP040687.1 Genbank gene 3771420 3772496 . + . ID=gene-IXO1088_018375;Name=IXO1088_018375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018375 CP040687.1 Protein Homology CDS 3771420 3772496 . + 0 ID=cds-QIE18065.1;Parent=gene-IXO1088_018375;Dbxref=NCBI_GP:QIE18065.1;Name=QIE18065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363342.1;locus_tag=IXO1088_018375;product=DUF4432 family protein;protein_id=QIE18065.1;transl_table=11 CP040687.1 Genbank gene 3772592 3773065 . - . ID=gene-IXO1088_018380;Name=IXO1088_018380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018380 CP040687.1 Protein Homology CDS 3772592 3773065 . - 0 ID=cds-QIE16850.1;Parent=gene-IXO1088_018380;Dbxref=NCBI_GP:QIE16850.1;Name=QIE16850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156981.1;locus_tag=IXO1088_018380;product=DUF3574 domain-containing protein;protein_id=QIE16850.1;transl_table=11 CP040687.1 Genbank gene 3773301 3775736 . + . ID=gene-IXO1088_018385;Name=IXO1088_018385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018385 CP040687.1 Protein Homology CDS 3773301 3775736 . + 0 ID=cds-QIE16851.1;Parent=gene-IXO1088_018385;Dbxref=NCBI_GP:QIE16851.1;Name=QIE16851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638426.1;locus_tag=IXO1088_018385;product=TonB-dependent receptor;protein_id=QIE16851.1;transl_table=11 CP040687.1 Genbank gene 3776281 3776829 . + . ID=gene-IXO1088_018390;Name=IXO1088_018390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018390 CP040687.1 Protein Homology CDS 3776281 3776829 . + 0 ID=cds-QIE18066.1;Parent=gene-IXO1088_018390;Dbxref=NCBI_GP:QIE18066.1;Name=QIE18066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117875.1;locus_tag=IXO1088_018390;product=hypothetical protein;protein_id=QIE18066.1;transl_table=11 CP040687.1 Genbank gene 3777055 3777813 . + . ID=gene-IXO1088_018395;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=IXO1088_018395 CP040687.1 Protein Homology CDS 3777055 3777813 . + 0 ID=cds-QIE16852.1;Parent=gene-IXO1088_018395;Dbxref=NCBI_GP:QIE16852.1;Name=QIE16852.1;gbkey=CDS;gene=otsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156980.1;locus_tag=IXO1088_018395;product=trehalose-phosphatase;protein_id=QIE16852.1;transl_table=11 CP040687.1 Genbank gene 3777858 3779636 . + . ID=gene-IXO1088_018400;Name=IXO1088_018400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018400 CP040687.1 Protein Homology CDS 3777858 3779636 . + 0 ID=cds-QIE16853.1;Parent=gene-IXO1088_018400;Dbxref=NCBI_GP:QIE16853.1;Name=QIE16853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638428.1;locus_tag=IXO1088_018400;product=glycoside hydrolase family 15 protein;protein_id=QIE16853.1;transl_table=11 CP040687.1 Genbank gene 3779633 3781000 . + . ID=gene-IXO1088_018405;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=IXO1088_018405 CP040687.1 Protein Homology CDS 3779633 3781000 . + 0 ID=cds-QIE16854.1;Parent=gene-IXO1088_018405;Dbxref=NCBI_GP:QIE16854.1;Name=QIE16854.1;gbkey=CDS;gene=otsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638429.1;locus_tag=IXO1088_018405;product=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming);protein_id=QIE16854.1;transl_table=11 CP040687.1 Genbank gene 3781250 3781630 . - . ID=gene-IXO1088_018410;Name=IXO1088_018410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018410 CP040687.1 Protein Homology CDS 3781250 3781630 . - 0 ID=cds-QIE16855.1;Parent=gene-IXO1088_018410;Dbxref=NCBI_GP:QIE16855.1;Name=QIE16855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258374.1;locus_tag=IXO1088_018410;product=DUF393 domain-containing protein;protein_id=QIE16855.1;transl_table=11 CP040687.1 Genbank gene 3781605 3782111 . - . ID=gene-IXO1088_018415;Name=IXO1088_018415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018415 CP040687.1 Protein Homology CDS 3781605 3782111 . - 0 ID=cds-QIE18068.1;Parent=gene-IXO1088_018415;Dbxref=NCBI_GP:QIE18068.1;Name=QIE18068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638433.1;locus_tag=IXO1088_018415;product=DUF4166 domain-containing protein;protein_id=QIE18068.1;transl_table=11 CP040687.1 Genbank gene 3782132 3782938 . - . ID=gene-IXO1088_018420;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=IXO1088_018420 CP040687.1 Protein Homology CDS 3782132 3782938 . - 0 ID=cds-QIE16856.1;Parent=gene-IXO1088_018420;Dbxref=NCBI_GP:QIE16856.1;Name=QIE16856.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444451.1;locus_tag=IXO1088_018420;product=peptidoglycan editing factor PgeF;protein_id=QIE16856.1;transl_table=11 CP040687.1 Genbank gene 3782946 3783941 . - . ID=gene-IXO1088_018425;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=IXO1088_018425 CP040687.1 Protein Homology CDS 3782946 3783941 . - 0 ID=cds-QIE18067.1;Parent=gene-IXO1088_018425;Dbxref=NCBI_GP:QIE18067.1;Name=QIE18067.1;gbkey=CDS;gene=rluD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408077.1;locus_tag=IXO1088_018425;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=QIE18067.1;transl_table=11 CP040687.1 Genbank gene 3784062 3784943 . + . ID=gene-IXO1088_018430;Name=IXO1088_018430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018430 CP040687.1 Protein Homology CDS 3784062 3784943 . + 0 ID=cds-QIE16857.1;Parent=gene-IXO1088_018430;Dbxref=NCBI_GP:QIE16857.1;Name=QIE16857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638436.1;locus_tag=IXO1088_018430;product=outer membrane protein assembly factor BamD;protein_id=QIE16857.1;transl_table=11 CP040687.1 Genbank gene 3785101 3786759 . - . ID=gene-IXO1088_018435;Name=IXO1088_018435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018435 CP040687.1 Protein Homology CDS 3785101 3786759 . - 0 ID=cds-QIE16858.1;Parent=gene-IXO1088_018435;Dbxref=NCBI_GP:QIE16858.1;Name=QIE16858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638438.1;locus_tag=IXO1088_018435;product=NAD+ synthase;protein_id=QIE16858.1;transl_table=11 CP040687.1 Genbank gene 3786839 3787330 . - . ID=gene-IXO1088_018440;Name=IXO1088_018440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018440 CP040687.1 Protein Homology CDS 3786839 3787330 . - 0 ID=cds-QIE16859.1;Parent=gene-IXO1088_018440;Dbxref=NCBI_GP:QIE16859.1;Name=QIE16859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165087.1;locus_tag=IXO1088_018440;product=hypothetical protein;protein_id=QIE16859.1;transl_table=11 CP040687.1 Genbank gene 3787503 3788378 . - . ID=gene-IXO1088_018445;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=IXO1088_018445 CP040687.1 Protein Homology CDS 3787503 3788378 . - 0 ID=cds-QIE16860.1;Parent=gene-IXO1088_018445;Dbxref=NCBI_GP:QIE16860.1;Name=QIE16860.1;gbkey=CDS;gene=sucD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638440.1;locus_tag=IXO1088_018445;product=succinate--CoA ligase subunit alpha;protein_id=QIE16860.1;transl_table=11 CP040687.1 Genbank gene 3788403 3789572 . - . ID=gene-IXO1088_018450;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=IXO1088_018450 CP040687.1 Protein Homology CDS 3788403 3789572 . - 0 ID=cds-QIE16861.1;Parent=gene-IXO1088_018450;Dbxref=NCBI_GP:QIE16861.1;Name=QIE16861.1;gbkey=CDS;gene=sucC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019183942.1;locus_tag=IXO1088_018450;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=QIE16861.1;transl_table=11 CP040687.1 Genbank gene 3789806 3791419 . + . ID=gene-IXO1088_018455;Name=IXO1088_018455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018455 CP040687.1 Protein Homology CDS 3789806 3791419 . + 0 ID=cds-QIE18069.1;Parent=gene-IXO1088_018455;Dbxref=NCBI_GP:QIE18069.1;Name=QIE18069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348336.1;locus_tag=IXO1088_018455;product=HAMP domain-containing histidine kinase;protein_id=QIE18069.1;transl_table=11 CP040687.1 Genbank gene 3791750 3793141 . + . ID=gene-IXO1088_018460;Name=IXO1088_018460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018460 CP040687.1 Protein Homology CDS 3791750 3793141 . + 0 ID=cds-QIE16862.1;Parent=gene-IXO1088_018460;Dbxref=NCBI_GP:QIE16862.1;Name=QIE16862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366202.1;locus_tag=IXO1088_018460;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=QIE16862.1;transl_table=11 CP040687.1 Genbank gene 3793214 3793420 . + . ID=gene-IXO1088_018465;Name=IXO1088_018465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018465 CP040687.1 Protein Homology CDS 3793214 3793420 . + 0 ID=cds-QIE16863.1;Parent=gene-IXO1088_018465;Dbxref=NCBI_GP:QIE16863.1;Name=QIE16863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812262.1;locus_tag=IXO1088_018465;product=DUF2559 family protein;protein_id=QIE16863.1;transl_table=11 CP040687.1 Genbank pseudogene 3793482 3793991 . + . ID=gene-IXO1088_018470;Name=IXO1088_018470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018470;pseudo=true CP040687.1 Protein Homology CDS 3793482 3793991 . + 0 ID=cds-IXO1088_018470;Parent=gene-IXO1088_018470;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504318.1;locus_tag=IXO1088_018470;product=cell filamentation protein Fic;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3794000 3795733 . - . ID=gene-IXO1088_018475;Name=pilB;gbkey=Gene;gene=pilB;gene_biotype=protein_coding;locus_tag=IXO1088_018475 CP040687.1 Protein Homology CDS 3794000 3795733 . - 0 ID=cds-QIE16864.1;Parent=gene-IXO1088_018475;Dbxref=NCBI_GP:QIE16864.1;Name=QIE16864.1;gbkey=CDS;gene=pilB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638444.1;locus_tag=IXO1088_018475;product=type IV-A pilus assembly ATPase PilB;protein_id=QIE16864.1;transl_table=11 CP040687.1 Genbank gene 3795768 3797294 . - . ID=gene-IXO1088_018480;Name=IXO1088_018480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018480 CP040687.1 Protein Homology CDS 3795768 3797294 . - 0 ID=cds-QIE16865.1;Parent=gene-IXO1088_018480;Dbxref=NCBI_GP:QIE16865.1;Name=QIE16865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016944997.1;locus_tag=IXO1088_018480;product=hypothetical protein;protein_id=QIE16865.1;transl_table=11 CP040687.1 Genbank gene 3797264 3797923 . - . ID=gene-IXO1088_018485;Name=IXO1088_018485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018485 CP040687.1 Protein Homology CDS 3797264 3797923 . - 0 ID=cds-QIE16866.1;Parent=gene-IXO1088_018485;Dbxref=NCBI_GP:QIE16866.1;Name=QIE16866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302548.1;locus_tag=IXO1088_018485;product=hypothetical protein;protein_id=QIE16866.1;transl_table=11 CP040687.1 Genbank gene 3797904 3799493 . - . ID=gene-IXO1088_018490;Name=IXO1088_018490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018490 CP040687.1 Protein Homology CDS 3797904 3799493 . - 0 ID=cds-QIE16867.1;Parent=gene-IXO1088_018490;Dbxref=NCBI_GP:QIE16867.1;Name=QIE16867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504322.1;locus_tag=IXO1088_018490;product=phosphoethanolamine transferase;protein_id=QIE16867.1;transl_table=11 CP040687.1 Genbank gene 3799628 3800053 . - . ID=gene-IXO1088_018495;Name=IXO1088_018495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018495 CP040687.1 Protein Homology CDS 3799628 3800053 . - 0 ID=cds-QIE16868.1;Parent=gene-IXO1088_018495;Dbxref=NCBI_GP:QIE16868.1;Name=QIE16868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010363792.1;locus_tag=IXO1088_018495;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=QIE16868.1;transl_table=11 CP040687.1 Genbank gene 3800408 3801667 . + . ID=gene-IXO1088_018500;Name=IXO1088_018500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018500 CP040687.1 Protein Homology CDS 3800408 3801667 . + 0 ID=cds-QIE16869.1;Parent=gene-IXO1088_018500;Dbxref=NCBI_GP:QIE16869.1;Name=QIE16869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003477101.1;locus_tag=IXO1088_018500;product=type II secretion system F family protein;protein_id=QIE16869.1;transl_table=11 CP040687.1 Genbank gene 3801674 3802537 . + . ID=gene-IXO1088_018505;Name=IXO1088_018505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018505 CP040687.1 Protein Homology CDS 3801674 3802537 . + 0 ID=cds-QIE16870.1;Parent=gene-IXO1088_018505;Dbxref=NCBI_GP:QIE16870.1;Name=QIE16870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638448.1;locus_tag=IXO1088_018505;product=prepilin peptidase;protein_id=QIE16870.1;transl_table=11 CP040687.1 Genbank gene 3802551 3803159 . + . ID=gene-IXO1088_018510;Name=IXO1088_018510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018510 CP040687.1 Protein Homology CDS 3802551 3803159 . + 0 ID=cds-QIE16871.1;Parent=gene-IXO1088_018510;Dbxref=NCBI_GP:QIE16871.1;Name=QIE16871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258357.1;locus_tag=IXO1088_018510;product=dephospho-CoA kinase;protein_id=QIE16871.1;transl_table=11 CP040687.1 Genbank gene 3803230 3804549 . + . ID=gene-IXO1088_018515;Name=IXO1088_018515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018515 CP040687.1 Protein Homology CDS 3803230 3804549 . + 0 ID=cds-QIE16872.1;Parent=gene-IXO1088_018515;Dbxref=NCBI_GP:QIE16872.1;Name=QIE16872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_018515;product=IS701 family transposase;protein_id=QIE16872.1;transl_table=11 CP040687.1 Genbank gene 3804791 3805753 . + . ID=gene-IXO1088_018520;Name=IXO1088_018520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018520 CP040687.1 Protein Homology CDS 3804791 3805753 . + 0 ID=cds-QIE16873.1;Parent=gene-IXO1088_018520;Dbxref=NCBI_GP:QIE16873.1;Name=QIE16873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1088_018520;product=IS1595-like element ISXo2 family transposase;protein_id=QIE16873.1;transl_table=11 CP040687.1 Genbank gene 3806190 3806525 . - . ID=gene-IXO1088_018525;Name=IXO1088_018525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018525 CP040687.1 Protein Homology CDS 3806190 3806525 . - 0 ID=cds-QIE16874.1;Parent=gene-IXO1088_018525;Dbxref=NCBI_GP:QIE16874.1;Name=QIE16874.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF15523.4;locus_tag=IXO1088_018525;product=hypothetical protein;protein_id=QIE16874.1;transl_table=11 CP040687.1 Genbank gene 3806526 3807482 . - . ID=gene-IXO1088_018530;Name=IXO1088_018530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018530 CP040687.1 Protein Homology CDS 3806526 3807482 . - 0 ID=cds-QIE16875.1;Parent=gene-IXO1088_018530;Dbxref=NCBI_GP:QIE16875.1;Name=QIE16875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1088_018530;product=IS30-like element IS1112b family transposase;protein_id=QIE16875.1;transl_table=11 CP040687.1 Genbank pseudogene 3807721 3809039 . - . ID=gene-IXO1088_018535;Name=IXO1088_018535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018535;pseudo=true CP040687.1 Protein Homology CDS 3807721 3809039 . - 0 ID=cds-IXO1088_018535;Parent=gene-IXO1088_018535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_018535;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3809154 3809522 . - . ID=gene-IXO1088_018540;Name=IXO1088_018540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018540 CP040687.1 Protein Homology CDS 3809154 3809522 . - 0 ID=cds-QIE16876.1;Parent=gene-IXO1088_018540;Dbxref=NCBI_GP:QIE16876.1;Name=QIE16876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448936.1;locus_tag=IXO1088_018540;product=hypothetical protein;protein_id=QIE16876.1;transl_table=11 CP040687.1 Genbank gene 3809528 3811036 . - . ID=gene-IXO1088_018545;Name=IXO1088_018545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018545 CP040687.1 Protein Homology CDS 3809528 3811036 . - 0 ID=cds-QIE16877.1;Parent=gene-IXO1088_018545;Dbxref=NCBI_GP:QIE16877.1;Name=QIE16877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258354.1;locus_tag=IXO1088_018545;product=RHS repeat-associated core domain-containing protein;protein_id=QIE16877.1;transl_table=11 CP040687.1 Genbank gene 3811038 3811367 . - . ID=gene-IXO1088_018550;Name=IXO1088_018550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018550 CP040687.1 GeneMarkS-2+ CDS 3811038 3811367 . - 0 ID=cds-QIE16878.1;Parent=gene-IXO1088_018550;Dbxref=NCBI_GP:QIE16878.1;Name=QIE16878.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_018550;product=hypothetical protein;protein_id=QIE16878.1;transl_table=11 CP040687.1 Genbank gene 3811364 3811663 . - . ID=gene-IXO1088_018555;Name=IXO1088_018555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018555 CP040687.1 GeneMarkS-2+ CDS 3811364 3811663 . - 0 ID=cds-QIE16879.1;Parent=gene-IXO1088_018555;Dbxref=NCBI_GP:QIE16879.1;Name=QIE16879.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_018555;product=hypothetical protein;protein_id=QIE16879.1;transl_table=11 CP040687.1 Genbank gene 3811812 3812780 . - . ID=gene-IXO1088_018560;Name=IXO1088_018560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018560 CP040687.1 Protein Homology CDS 3811812 3812780 . - 0 ID=cds-QIE16880.1;Parent=gene-IXO1088_018560;Dbxref=NCBI_GP:QIE16880.1;Name=QIE16880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_018560;product=IS5-like element ISXo1 family transposase;protein_id=QIE16880.1;transl_table=11 CP040687.1 Genbank gene 3812832 3813320 . - . ID=gene-IXO1088_018565;Name=IXO1088_018565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018565 CP040687.1 GeneMarkS-2+ CDS 3812832 3813320 . - 0 ID=cds-QIE16881.1;Parent=gene-IXO1088_018565;Dbxref=NCBI_GP:QIE16881.1;Name=QIE16881.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_018565;product=hypothetical protein;protein_id=QIE16881.1;transl_table=11 CP040687.1 Genbank gene 3813320 3817810 . - . ID=gene-IXO1088_018570;Name=IXO1088_018570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018570 CP040687.1 Protein Homology CDS 3813320 3817810 . - 0 ID=cds-QIE16882.1;Parent=gene-IXO1088_018570;Dbxref=NCBI_GP:QIE16882.1;Name=QIE16882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258350.1;locus_tag=IXO1088_018570;product=type IV secretion protein Rhs;protein_id=QIE16882.1;transl_table=11 CP040687.1 Genbank gene 3817987 3818970 . - . ID=gene-IXO1088_018575;Name=IXO1088_018575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018575 CP040687.1 Protein Homology CDS 3817987 3818970 . - 0 ID=cds-QIE18070.1;Parent=gene-IXO1088_018575;Dbxref=NCBI_GP:QIE18070.1;Name=QIE18070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408062.1;locus_tag=IXO1088_018575;product=IS5 family transposase;protein_id=QIE18070.1;transl_table=11 CP040687.1 Genbank pseudogene 3819108 3819440 . + . ID=gene-IXO1088_018580;Name=IXO1088_018580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018580;pseudo=true CP040687.1 Protein Homology CDS 3819108 3819440 . + 0 ID=cds-IXO1088_018580;Parent=gene-IXO1088_018580;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_018580;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3819452 3820687 . - . ID=gene-IXO1088_018585;Name=IXO1088_018585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018585 CP040687.1 Protein Homology CDS 3819452 3820687 . - 0 ID=cds-QIE16883.1;Parent=gene-IXO1088_018585;Dbxref=NCBI_GP:QIE16883.1;Name=QIE16883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1088_018585;product=ISL3-like element ISXoo13 family transposase;protein_id=QIE16883.1;transl_table=11 CP040687.1 Genbank pseudogene 3820752 3821747 . + . ID=gene-IXO1088_018590;Name=IXO1088_018590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018590;pseudo=true CP040687.1 Protein Homology CDS 3820752 3821747 . + 0 ID=cds-IXO1088_018590;Parent=gene-IXO1088_018590;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_018590;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3821790 3821969 . + . ID=gene-IXO1088_018595;Name=IXO1088_018595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018595;pseudo=true CP040687.1 Protein Homology CDS 3821790 3821969 . + 0 ID=cds-IXO1088_018595;Parent=gene-IXO1088_018595;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_018595;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3822025 3823059 . + . ID=gene-IXO1088_018600;Name=IXO1088_018600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018600 CP040687.1 Protein Homology CDS 3822025 3823059 . + 0 ID=cds-QIE18071.1;Parent=gene-IXO1088_018600;Dbxref=NCBI_GP:QIE18071.1;Name=QIE18071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611268.1;locus_tag=IXO1088_018600;product=IS630 family transposase;protein_id=QIE18071.1;transl_table=11 CP040687.1 Genbank pseudogene 3823089 3823669 . + . ID=gene-IXO1088_018605;Name=IXO1088_018605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018605;pseudo=true CP040687.1 Protein Homology CDS 3823089 3823669 . + 0 ID=cds-IXO1088_018605;Parent=gene-IXO1088_018605;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_018605;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3823745 3825577 . - . ID=gene-IXO1088_018610;Name=IXO1088_018610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018610 CP040687.1 Protein Homology CDS 3823745 3825577 . - 0 ID=cds-QIE16884.1;Parent=gene-IXO1088_018610;Dbxref=NCBI_GP:QIE16884.1;Name=QIE16884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637981.1;locus_tag=IXO1088_018610;product=ABC transporter ATP-binding protein;protein_id=QIE16884.1;transl_table=11 CP040687.1 Genbank gene 3825709 3826299 . - . ID=gene-IXO1088_018615;Name=IXO1088_018615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018615 CP040687.1 Protein Homology CDS 3825709 3826299 . - 0 ID=cds-QIE16885.1;Parent=gene-IXO1088_018615;Dbxref=NCBI_GP:QIE16885.1;Name=QIE16885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487596.1;locus_tag=IXO1088_018615;product=plasmid pRiA4b ORF-3 family protein;protein_id=QIE16885.1;transl_table=11 CP040687.1 Genbank gene 3826365 3829421 . - . ID=gene-IXO1088_018620;Name=IXO1088_018620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018620 CP040687.1 Protein Homology CDS 3826365 3829421 . - 0 ID=cds-QIE16886.1;Parent=gene-IXO1088_018620;Dbxref=NCBI_GP:QIE16886.1;Name=QIE16886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366871.1;locus_tag=IXO1088_018620;product=efflux RND transporter permease subunit;protein_id=QIE16886.1;transl_table=11 CP040687.1 Genbank gene 3829418 3830521 . - . ID=gene-IXO1088_018625;Name=IXO1088_018625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018625 CP040687.1 Protein Homology CDS 3829418 3830521 . - 0 ID=cds-QIE16887.1;Parent=gene-IXO1088_018625;Dbxref=NCBI_GP:QIE16887.1;Name=QIE16887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258341.1;locus_tag=IXO1088_018625;product=efflux RND transporter periplasmic adaptor subunit;protein_id=QIE16887.1;transl_table=11 CP040687.1 Genbank gene 3830547 3831383 . - . ID=gene-IXO1088_018630;Name=IXO1088_018630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018630 CP040687.1 Protein Homology CDS 3830547 3831383 . - 0 ID=cds-QIE16888.1;Parent=gene-IXO1088_018630;Dbxref=NCBI_GP:QIE16888.1;Name=QIE16888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366875.1;locus_tag=IXO1088_018630;product=MipA/OmpV family protein;protein_id=QIE16888.1;transl_table=11 CP040687.1 Genbank gene 3831403 3832872 . - . ID=gene-IXO1088_018635;Name=IXO1088_018635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018635 CP040687.1 Protein Homology CDS 3831403 3832872 . - 0 ID=cds-QIE16889.1;Parent=gene-IXO1088_018635;Dbxref=NCBI_GP:QIE16889.1;Name=QIE16889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487588.1;locus_tag=IXO1088_018635;product=efflux transporter outer membrane subunit;protein_id=QIE16889.1;transl_table=11 CP040687.1 Genbank gene 3832978 3833667 . + . ID=gene-IXO1088_018640;Name=IXO1088_018640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018640 CP040687.1 Protein Homology CDS 3832978 3833667 . + 0 ID=cds-QIE16890.1;Parent=gene-IXO1088_018640;Dbxref=NCBI_GP:QIE16890.1;Name=QIE16890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408057.1;locus_tag=IXO1088_018640;product=response regulator transcription factor;protein_id=QIE16890.1;transl_table=11 CP040687.1 Genbank gene 3833664 3834857 . + . ID=gene-IXO1088_018645;Name=IXO1088_018645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018645 CP040687.1 Protein Homology CDS 3833664 3834857 . + 0 ID=cds-QIE16891.1;Parent=gene-IXO1088_018645;Dbxref=NCBI_GP:QIE16891.1;Name=QIE16891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155809.1;locus_tag=IXO1088_018645;product=HAMP domain-containing protein;protein_id=QIE16891.1;transl_table=11 CP040687.1 Genbank gene 3834916 3836181 . - . ID=gene-IXO1088_018650;Name=IXO1088_018650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018650 CP040687.1 Protein Homology CDS 3834916 3836181 . - 0 ID=cds-QIE16892.1;Parent=gene-IXO1088_018650;Dbxref=NCBI_GP:QIE16892.1;Name=QIE16892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637982.1;locus_tag=IXO1088_018650;product=cation:proton antiporter;protein_id=QIE16892.1;transl_table=11 CP040687.1 Genbank gene 3836328 3838004 . - . ID=gene-IXO1088_018655;Name=IXO1088_018655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018655 CP040687.1 Protein Homology CDS 3836328 3838004 . - 0 ID=cds-QIE16893.1;Parent=gene-IXO1088_018655;Dbxref=NCBI_GP:QIE16893.1;Name=QIE16893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155811.1;locus_tag=IXO1088_018655;product=serine hydrolase;protein_id=QIE16893.1;transl_table=11 CP040687.1 Genbank gene 3837946 3838446 . - . ID=gene-IXO1088_018660;Name=IXO1088_018660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018660 CP040687.1 Protein Homology CDS 3837946 3838446 . - 0 ID=cds-QIE18072.1;Parent=gene-IXO1088_018660;Dbxref=NCBI_GP:QIE18072.1;Name=QIE18072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172501.1;locus_tag=IXO1088_018660;product=RraA family protein;protein_id=QIE18072.1;transl_table=11 CP040687.1 Genbank gene 3839019 3839852 . + . ID=gene-IXO1088_018665;Name=IXO1088_018665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018665 CP040687.1 Protein Homology CDS 3839019 3839852 . + 0 ID=cds-QIE16894.1;Parent=gene-IXO1088_018665;Dbxref=NCBI_GP:QIE16894.1;Name=QIE16894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155814.1;locus_tag=IXO1088_018665;product=DUF72 domain-containing protein;protein_id=QIE16894.1;transl_table=11 CP040687.1 Genbank gene 3839911 3839987 . + . ID=gene-IXO1088_018670;Name=IXO1088_018670;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_018670 CP040687.1 cmsearch ncRNA 3839911 3839987 . + . ID=rna-IXO1088_018670;Parent=gene-IXO1088_018670;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_018670;product=sX9 sRNA CP040687.1 cmsearch exon 3839911 3839987 . + . ID=exon-IXO1088_018670-1;Parent=rna-IXO1088_018670;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_018670;product=sX9 sRNA CP040687.1 Genbank gene 3840262 3841209 . + . ID=gene-IXO1088_018675;Name=IXO1088_018675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018675 CP040687.1 Protein Homology CDS 3840262 3841209 . + 0 ID=cds-QIE16895.1;Parent=gene-IXO1088_018675;Dbxref=NCBI_GP:QIE16895.1;Name=QIE16895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637987.1;locus_tag=IXO1088_018675;product=DMT family transporter;protein_id=QIE16895.1;transl_table=11 CP040687.1 Genbank gene 3841397 3842119 . - . ID=gene-IXO1088_018680;Name=IXO1088_018680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018680 CP040687.1 Protein Homology CDS 3841397 3842119 . - 0 ID=cds-QIE16896.1;Parent=gene-IXO1088_018680;Dbxref=NCBI_GP:QIE16896.1;Name=QIE16896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637988.1;locus_tag=IXO1088_018680;product=pseudouridine synthase;protein_id=QIE16896.1;transl_table=11 CP040687.1 Genbank gene 3842262 3844658 . - . ID=gene-IXO1088_018685;Name=IXO1088_018685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018685 CP040687.1 Protein Homology CDS 3842262 3844658 . - 0 ID=cds-QIE16897.1;Parent=gene-IXO1088_018685;Dbxref=NCBI_GP:QIE16897.1;Name=QIE16897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573503.1;locus_tag=IXO1088_018685;product=EAL domain-containing protein;protein_id=QIE16897.1;transl_table=11 CP040687.1 Genbank gene 3844922 3846826 . - . ID=gene-IXO1088_018690;Name=IXO1088_018690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018690 CP040687.1 Protein Homology CDS 3844922 3846826 . - 0 ID=cds-QIE16898.1;Parent=gene-IXO1088_018690;Dbxref=NCBI_GP:QIE16898.1;Name=QIE16898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159026.1;locus_tag=IXO1088_018690;product=DEAD/DEAH box helicase;protein_id=QIE16898.1;transl_table=11 CP040687.1 Genbank pseudogene 3847061 3847473 . + . ID=gene-IXO1088_018695;Name=IXO1088_018695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018695;pseudo=true CP040687.1 Protein Homology CDS 3847061 3847473 . + 0 ID=cds-IXO1088_018695;Parent=gene-IXO1088_018695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377461.1;locus_tag=IXO1088_018695;product=sigma-70 family RNA polymerase sigma factor;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3847503 3848152 . + . ID=gene-IXO1088_018700;Name=IXO1088_018700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018700;pseudo=true CP040687.1 Protein Homology CDS 3847503 3848152 . + 0 ID=cds-IXO1088_018700;Parent=gene-IXO1088_018700;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169196.1;locus_tag=IXO1088_018700;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3848189 3848431 . + . ID=gene-IXO1088_018705;Name=IXO1088_018705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018705 CP040687.1 Protein Homology CDS 3848189 3848431 . + 0 ID=cds-QIE16899.1;Parent=gene-IXO1088_018705;Dbxref=NCBI_GP:QIE16899.1;Name=QIE16899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005919351.1;locus_tag=IXO1088_018705;product=RNA-binding S4 domain-containing protein;protein_id=QIE16899.1;transl_table=11 CP040687.1 Genbank pseudogene 3848428 3848744 . + . ID=gene-IXO1088_018710;Name=IXO1088_018710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018710;pseudo=true CP040687.1 Protein Homology CDS 3848428 3848744 . + 0 ID=cds-IXO1088_018710;Parent=gene-IXO1088_018710;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169195.1;locus_tag=IXO1088_018710;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3848777 3849178 . - . ID=gene-IXO1088_018715;Name=IXO1088_018715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018715 CP040687.1 Protein Homology CDS 3848777 3849178 . - 0 ID=cds-QIE16900.1;Parent=gene-IXO1088_018715;Dbxref=NCBI_GP:QIE16900.1;Name=QIE16900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304051.1;locus_tag=IXO1088_018715;product=hypothetical protein;protein_id=QIE16900.1;transl_table=11 CP040687.1 Genbank gene 3849204 3849737 . - . ID=gene-IXO1088_018720;Name=IXO1088_018720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018720 CP040687.1 Protein Homology CDS 3849204 3849737 . - 0 ID=cds-QIE16901.1;Parent=gene-IXO1088_018720;Dbxref=NCBI_GP:QIE16901.1;Name=QIE16901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155824.1;locus_tag=IXO1088_018720;product=DUF4019 domain-containing protein;protein_id=QIE16901.1;transl_table=11 CP040687.1 Genbank gene 3850140 3850394 . - . ID=gene-IXO1088_018725;Name=IXO1088_018725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018725 CP040687.1 Protein Homology CDS 3850140 3850394 . - 0 ID=cds-QIE16902.1;Parent=gene-IXO1088_018725;Dbxref=NCBI_GP:QIE16902.1;Name=QIE16902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377450.1;locus_tag=IXO1088_018725;product=hypothetical protein;protein_id=QIE16902.1;transl_table=11 CP040687.1 Genbank gene 3850473 3850820 . - . ID=gene-IXO1088_018730;Name=IXO1088_018730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018730 CP040687.1 Protein Homology CDS 3850473 3850820 . - 0 ID=cds-QIE16903.1;Parent=gene-IXO1088_018730;Dbxref=NCBI_GP:QIE16903.1;Name=QIE16903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502651.1;locus_tag=IXO1088_018730;product=hypothetical protein;protein_id=QIE16903.1;transl_table=11 CP040687.1 Genbank pseudogene 3850789 3851037 . - . ID=gene-IXO1088_018735;Name=IXO1088_018735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018735;pseudo=true CP040687.1 Protein Homology CDS 3850789 3851037 . - 0 ID=cds-IXO1088_018735;Parent=gene-IXO1088_018735;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258321.1;locus_tag=IXO1088_018735;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3851126 3852091 . + . ID=gene-IXO1088_018740;Name=IXO1088_018740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018740 CP040687.1 Protein Homology CDS 3851126 3852091 . + 0 ID=cds-QIE16904.1;Parent=gene-IXO1088_018740;Dbxref=NCBI_GP:QIE16904.1;Name=QIE16904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_018740;product=IS1595-like element ISXo5 family transposase;protein_id=QIE16904.1;transl_table=11 CP040687.1 Genbank pseudogene 3852098 3852763 . - . ID=gene-IXO1088_018745;Name=IXO1088_018745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018745;pseudo=true CP040687.1 Protein Homology CDS 3852098 3852763 . - 0 ID=cds-IXO1088_018745;Parent=gene-IXO1088_018745;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637999.1;locus_tag=IXO1088_018745;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3852910 3854373 . + . ID=gene-IXO1088_018750;Name=IXO1088_018750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018750 CP040687.1 Protein Homology CDS 3852910 3854373 . + 0 ID=cds-QIE16905.1;Parent=gene-IXO1088_018750;Dbxref=NCBI_GP:QIE16905.1;Name=QIE16905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638000.1;locus_tag=IXO1088_018750;product=DNA-3-methyladenine glycosylase 2 family protein;protein_id=QIE16905.1;transl_table=11 CP040687.1 Genbank gene 3854370 3854915 . + . ID=gene-IXO1088_018755;Name=IXO1088_018755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018755 CP040687.1 Protein Homology CDS 3854370 3854915 . + 0 ID=cds-QIE16906.1;Parent=gene-IXO1088_018755;Dbxref=NCBI_GP:QIE16906.1;Name=QIE16906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348043.1;locus_tag=IXO1088_018755;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=QIE16906.1;transl_table=11 CP040687.1 Genbank pseudogene 3855172 3856478 . + . ID=gene-IXO1088_018760;Name=IXO1088_018760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018760;pseudo=true CP040687.1 Protein Homology CDS 3855172 3856478 . + 0 ID=cds-IXO1088_018760;Parent=gene-IXO1088_018760;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155829.1;locus_tag=IXO1088_018760;product=alkaline phosphatase family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3856605 3858050 . + . ID=gene-IXO1088_018765;Name=IXO1088_018765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018765 CP040687.1 Protein Homology CDS 3856605 3858050 . + 0 ID=cds-QIE16907.1;Parent=gene-IXO1088_018765;Dbxref=NCBI_GP:QIE16907.1;Name=QIE16907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302096.1;locus_tag=IXO1088_018765;product=chloride channel protein;protein_id=QIE16907.1;transl_table=11 CP040687.1 Genbank gene 3858123 3859163 . + . ID=gene-IXO1088_018770;Name=IXO1088_018770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018770 CP040687.1 Protein Homology CDS 3858123 3859163 . + 0 ID=cds-QIE16908.1;Parent=gene-IXO1088_018770;Dbxref=NCBI_GP:QIE16908.1;Name=QIE16908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377437.1;locus_tag=IXO1088_018770;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=QIE16908.1;transl_table=11 CP040687.1 Genbank gene 3859296 3859478 . - . ID=gene-IXO1088_018775;Name=IXO1088_018775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018775 CP040687.1 Protein Homology CDS 3859296 3859478 . - 0 ID=cds-QIE16909.1;Parent=gene-IXO1088_018775;Dbxref=NCBI_GP:QIE16909.1;Name=QIE16909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487537.1;locus_tag=IXO1088_018775;product=30S ribosomal protein THX;protein_id=QIE16909.1;transl_table=11 CP040687.1 Genbank gene 3859778 3860188 . - . ID=gene-IXO1088_018780;Name=IXO1088_018780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018780 CP040687.1 Protein Homology CDS 3859778 3860188 . - 0 ID=cds-QIE16910.1;Parent=gene-IXO1088_018780;Dbxref=NCBI_GP:QIE16910.1;Name=QIE16910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638005.1;locus_tag=IXO1088_018780;product=MerC domain-containing protein;protein_id=QIE16910.1;transl_table=11 CP040687.1 Genbank pseudogene 3860389 3862426 . + . ID=gene-IXO1088_018785;Name=IXO1088_018785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018785;pseudo=true CP040687.1 Protein Homology CDS 3860389 3862426 . + 0 ID=cds-IXO1088_018785;Parent=gene-IXO1088_018785;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005998312.1;locus_tag=IXO1088_018785;product=TonB-dependent receptor;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3862832 3862927 . + . ID=gene-IXO1088_018790;Name=IXO1088_018790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018790;pseudo=true CP040687.1 Protein Homology CDS 3862832 3862927 . + 0 ID=cds-IXO1088_018790;Parent=gene-IXO1088_018790;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409689.1;locus_tag=IXO1088_018790;product=monooxygenase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3862924 3864243 . - . ID=gene-IXO1088_018795;Name=IXO1088_018795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018795 CP040687.1 Protein Homology CDS 3862924 3864243 . - 0 ID=cds-QIE16911.1;Parent=gene-IXO1088_018795;Dbxref=NCBI_GP:QIE16911.1;Name=QIE16911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_018795;product=IS701 family transposase;protein_id=QIE16911.1;transl_table=11 CP040687.1 Genbank gene 3864342 3866675 . + . ID=gene-IXO1088_018800;Name=IXO1088_018800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018800 CP040687.1 Protein Homology CDS 3864342 3866675 . + 0 ID=cds-QIE16912.1;Parent=gene-IXO1088_018800;Dbxref=NCBI_GP:QIE16912.1;Name=QIE16912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017119005.1;locus_tag=IXO1088_018800;product=TonB-dependent receptor;protein_id=QIE16912.1;transl_table=11 CP040687.1 Genbank gene 3866919 3867875 . - . ID=gene-IXO1088_018805;Name=IXO1088_018805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018805 CP040687.1 Protein Homology CDS 3866919 3867875 . - 0 ID=cds-QIE16913.1;Parent=gene-IXO1088_018805;Dbxref=NCBI_GP:QIE16913.1;Name=QIE16913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_082322974.1;locus_tag=IXO1088_018805;product=IS30 family transposase;protein_id=QIE16913.1;transl_table=11 CP040687.1 Genbank gene 3867927 3868337 . - . ID=gene-IXO1088_018810;Name=IXO1088_018810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018810 CP040687.1 Protein Homology CDS 3867927 3868337 . - 0 ID=cds-QIE16914.1;Parent=gene-IXO1088_018810;Dbxref=NCBI_GP:QIE16914.1;Name=QIE16914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408038.1;locus_tag=IXO1088_018810;product=SDR family oxidoreductase;protein_id=QIE16914.1;transl_table=11 CP040687.1 Genbank gene 3868436 3869161 . - . ID=gene-IXO1088_018815;Name=IXO1088_018815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018815 CP040687.1 Protein Homology CDS 3868436 3869161 . - 0 ID=cds-QIE16915.1;Parent=gene-IXO1088_018815;Dbxref=NCBI_GP:QIE16915.1;Name=QIE16915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636809.1;locus_tag=IXO1088_018815;product=OmpA family protein;protein_id=QIE16915.1;transl_table=11 CP040687.1 Genbank gene 3869171 3869392 . - . ID=gene-IXO1088_018820;Name=IXO1088_018820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018820 CP040687.1 Protein Homology CDS 3869171 3869392 . - 0 ID=cds-QIE16916.1;Parent=gene-IXO1088_018820;Dbxref=NCBI_GP:QIE16916.1;Name=QIE16916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503847.1;locus_tag=IXO1088_018820;product=hypothetical protein;protein_id=QIE16916.1;transl_table=11 CP040687.1 Genbank gene 3869498 3869574 . + . ID=gene-IXO1088_018825;Name=IXO1088_018825;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_018825 CP040687.1 cmsearch ncRNA 3869498 3869574 . + . ID=rna-IXO1088_018825;Parent=gene-IXO1088_018825;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_018825;product=sX9 sRNA CP040687.1 cmsearch exon 3869498 3869574 . + . ID=exon-IXO1088_018825-1;Parent=rna-IXO1088_018825;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_018825;product=sX9 sRNA CP040687.1 Genbank gene 3869578 3871032 . - . ID=gene-IXO1088_018830;Name=IXO1088_018830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018830 CP040687.1 Protein Homology CDS 3869578 3871032 . - 0 ID=cds-QIE16917.1;Parent=gene-IXO1088_018830;Dbxref=NCBI_GP:QIE16917.1;Name=QIE16917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366306.1;locus_tag=IXO1088_018830;product=deoxyribodipyrimidine photo-lyase;protein_id=QIE16917.1;transl_table=11 CP040687.1 Genbank gene 3871099 3872529 . - . ID=gene-IXO1088_018835;Name=IXO1088_018835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018835 CP040687.1 Protein Homology CDS 3871099 3872529 . - 0 ID=cds-QIE16918.1;Parent=gene-IXO1088_018835;Dbxref=NCBI_GP:QIE16918.1;Name=QIE16918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636807.1;locus_tag=IXO1088_018835;product=replicative DNA helicase;protein_id=QIE16918.1;transl_table=11 CP040687.1 Genbank gene 3872751 3873305 . - . ID=gene-IXO1088_018840;Name=IXO1088_018840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018840 CP040687.1 Protein Homology CDS 3872751 3873305 . - 0 ID=cds-QIE16919.1;Parent=gene-IXO1088_018840;Dbxref=NCBI_GP:QIE16919.1;Name=QIE16919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972091.1;locus_tag=IXO1088_018840;product=NAD(P)H-dependent oxidoreductase;protein_id=QIE16919.1;transl_table=11 CP040687.1 Genbank gene 3873522 3875462 . - . ID=gene-IXO1088_018845;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=IXO1088_018845 CP040687.1 Protein Homology CDS 3873522 3875462 . - 0 ID=cds-QIE16920.1;Parent=gene-IXO1088_018845;Dbxref=NCBI_GP:QIE16920.1;Name=QIE16920.1;gbkey=CDS;gene=asnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089787.1;locus_tag=IXO1088_018845;product=asparagine synthase (glutamine-hydrolyzing);protein_id=QIE16920.1;transl_table=11 CP040687.1 Genbank gene 3875638 3876276 . - . ID=gene-IXO1088_018850;Name=IXO1088_018850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018850 CP040687.1 Protein Homology CDS 3875638 3876276 . - 0 ID=cds-QIE16921.1;Parent=gene-IXO1088_018850;Dbxref=NCBI_GP:QIE16921.1;Name=QIE16921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408036.1;locus_tag=IXO1088_018850;product=glutathione S-transferase family protein;protein_id=QIE16921.1;transl_table=11 CP040687.1 Genbank pseudogene 3876402 3878428 . - . ID=gene-IXO1088_018855;Name=IXO1088_018855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018855;pseudo=true CP040687.1 Protein Homology CDS 3876402 3878428 . - 0 ID=cds-IXO1088_018855;Parent=gene-IXO1088_018855;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171542.1;locus_tag=IXO1088_018855;product=DUF3857 domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3878510 3879505 . - . ID=gene-IXO1088_018860;Name=IXO1088_018860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018860;pseudo=true CP040687.1 Protein Homology CDS 3878510 3879505 . - 0 ID=cds-IXO1088_018860;Parent=gene-IXO1088_018860;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636802.1;locus_tag=IXO1088_018860;product=acyl-CoA dehydrogenase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3879509 3880315 . - . ID=gene-IXO1088_018865;Name=IXO1088_018865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018865 CP040687.1 Protein Homology CDS 3879509 3880315 . - 0 ID=cds-QIE16922.1;Parent=gene-IXO1088_018865;Dbxref=NCBI_GP:QIE16922.1;Name=QIE16922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002801519.1;locus_tag=IXO1088_018865;product=IS5 family transposase;protein_id=QIE16922.1;transl_table=11 CP040687.1 Genbank pseudogene 3880359 3880532 . - . ID=gene-IXO1088_018870;Name=IXO1088_018870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018870;pseudo=true CP040687.1 Protein Homology CDS 3880359 3880532 . - 0 ID=cds-IXO1088_018870;Parent=gene-IXO1088_018870;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012509717.1;locus_tag=IXO1088_018870;product=acyl-CoA dehydrogenase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3880690 3881481 . - . ID=gene-IXO1088_018875;Name=IXO1088_018875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018875 CP040687.1 Protein Homology CDS 3880690 3881481 . - 0 ID=cds-QIE16923.1;Parent=gene-IXO1088_018875;Dbxref=NCBI_GP:QIE16923.1;Name=QIE16923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161798.1;locus_tag=IXO1088_018875;product=glycine zipper 2TM domain-containing protein;protein_id=QIE16923.1;transl_table=11 CP040687.1 Genbank gene 3881627 3881842 . + . ID=gene-IXO1088_018880;Name=IXO1088_018880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018880 CP040687.1 Protein Homology CDS 3881627 3881842 . + 0 ID=cds-QIE16924.1;Parent=gene-IXO1088_018880;Dbxref=NCBI_GP:QIE16924.1;Name=QIE16924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636800.1;locus_tag=IXO1088_018880;product=hypothetical protein;protein_id=QIE16924.1;transl_table=11 CP040687.1 Genbank gene 3881842 3882609 . + . ID=gene-IXO1088_018885;Name=IXO1088_018885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018885 CP040687.1 Protein Homology CDS 3881842 3882609 . + 0 ID=cds-QIE16925.1;Parent=gene-IXO1088_018885;Dbxref=NCBI_GP:QIE16925.1;Name=QIE16925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444390.1;locus_tag=IXO1088_018885;product=TatD family deoxyribonuclease;protein_id=QIE16925.1;transl_table=11 CP040687.1 Genbank gene 3882671 3883501 . - . ID=gene-IXO1088_018890;Name=IXO1088_018890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018890 CP040687.1 Protein Homology CDS 3882671 3883501 . - 0 ID=cds-QIE16926.1;Parent=gene-IXO1088_018890;Dbxref=NCBI_GP:QIE16926.1;Name=QIE16926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636798.1;locus_tag=IXO1088_018890;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=QIE16926.1;transl_table=11 CP040687.1 Genbank gene 3883574 3884002 . + . ID=gene-IXO1088_018895;Name=IXO1088_018895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018895 CP040687.1 Protein Homology CDS 3883574 3884002 . + 0 ID=cds-QIE16927.1;Parent=gene-IXO1088_018895;Dbxref=NCBI_GP:QIE16927.1;Name=QIE16927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966688.1;locus_tag=IXO1088_018895;product=cytochrome c;protein_id=QIE16927.1;transl_table=11 CP040687.1 Genbank gene 3884134 3884613 . + . ID=gene-IXO1088_018900;Name=IXO1088_018900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018900 CP040687.1 Protein Homology CDS 3884134 3884613 . + 0 ID=cds-QIE16928.1;Parent=gene-IXO1088_018900;Dbxref=NCBI_GP:QIE16928.1;Name=QIE16928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636796.1;locus_tag=IXO1088_018900;product=glycine zipper 2TM domain-containing protein;protein_id=QIE16928.1;transl_table=11 CP040687.1 Genbank gene 3884864 3885079 . - . ID=gene-IXO1088_018905;Name=IXO1088_018905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018905 CP040687.1 Protein Homology CDS 3884864 3885079 . - 0 ID=cds-QIE16929.1;Parent=gene-IXO1088_018905;Dbxref=NCBI_GP:QIE16929.1;Name=QIE16929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636795.1;locus_tag=IXO1088_018905;product=cold-shock protein;protein_id=QIE16929.1;transl_table=11 CP040687.1 Genbank gene 3885307 3885792 . + . ID=gene-IXO1088_018910;Name=IXO1088_018910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018910 CP040687.1 Protein Homology CDS 3885307 3885792 . + 0 ID=cds-QIE16930.1;Parent=gene-IXO1088_018910;Dbxref=NCBI_GP:QIE16930.1;Name=QIE16930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636794.1;locus_tag=IXO1088_018910;product=DUF456 domain-containing protein;protein_id=QIE16930.1;transl_table=11 CP040687.1 Genbank pseudogene 3885905 3886099 . + . ID=gene-IXO1088_018915;Name=IXO1088_018915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018915;pseudo=true CP040687.1 Protein Homology CDS 3885905 3886099 . + 0 ID=cds-IXO1088_018915;Parent=gene-IXO1088_018915;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_022557821.1;locus_tag=IXO1088_018915;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3886221 3887168 . + . ID=gene-IXO1088_018920;Name=IXO1088_018920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018920;pseudo=true CP040687.1 Protein Homology CDS 3886221 3887168 . + 0 ID=cds-IXO1088_018920;Parent=gene-IXO1088_018920;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1088_018920;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3887174 3887338 . - . ID=gene-IXO1088_018925;Name=IXO1088_018925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018925;pseudo=true CP040687.1 Protein Homology CDS 3887174 3887338 . - 0 ID=cds-IXO1088_018925;Parent=gene-IXO1088_018925;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=IXO1088_018925;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3887354 3887557 . - . ID=gene-IXO1088_018930;Name=IXO1088_018930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018930 CP040687.1 Protein Homology CDS 3887354 3887557 . - 0 ID=cds-QIE16931.1;Parent=gene-IXO1088_018930;Dbxref=NCBI_GP:QIE16931.1;Name=QIE16931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488570.1;locus_tag=IXO1088_018930;product=hypothetical protein;protein_id=QIE16931.1;transl_table=11 CP040687.1 Genbank pseudogene 3887780 3888199 . + . ID=gene-IXO1088_018935;Name=IXO1088_018935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018935;pseudo=true CP040687.1 Protein Homology CDS 3887780 3888199 . + 0 ID=cds-IXO1088_018935;Parent=gene-IXO1088_018935;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463427.1;locus_tag=IXO1088_018935;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3888335 3888793 . - . ID=gene-IXO1088_018940;Name=IXO1088_018940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018940 CP040687.1 Protein Homology CDS 3888335 3888793 . - 0 ID=cds-QIE16932.1;Parent=gene-IXO1088_018940;Dbxref=NCBI_GP:QIE16932.1;Name=QIE16932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157164.1;locus_tag=IXO1088_018940;product=cupin domain-containing protein;protein_id=QIE16932.1;transl_table=11 CP040687.1 Genbank gene 3888935 3889011 . + . ID=gene-IXO1088_018945;Name=IXO1088_018945;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_018945 CP040687.1 cmsearch ncRNA 3888935 3889011 . + . ID=rna-IXO1088_018945;Parent=gene-IXO1088_018945;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_018945;product=sX9 sRNA CP040687.1 cmsearch exon 3888935 3889011 . + . ID=exon-IXO1088_018945-1;Parent=rna-IXO1088_018945;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_018945;product=sX9 sRNA CP040687.1 Genbank gene 3889199 3889705 . - . ID=gene-IXO1088_018950;Name=IXO1088_018950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018950 CP040687.1 Protein Homology CDS 3889199 3889705 . - 0 ID=cds-QIE16933.1;Parent=gene-IXO1088_018950;Dbxref=NCBI_GP:QIE16933.1;Name=QIE16933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157169.1;locus_tag=IXO1088_018950;product=transcriptional repressor;protein_id=QIE16933.1;transl_table=11 CP040687.1 Genbank gene 3889719 3891122 . - . ID=gene-IXO1088_018955;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=IXO1088_018955 CP040687.1 Protein Homology CDS 3889719 3891122 . - 0 ID=cds-QIE16934.1;Parent=gene-IXO1088_018955;Dbxref=NCBI_GP:QIE16934.1;Name=QIE16934.1;gbkey=CDS;gene=gltX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638034.1;locus_tag=IXO1088_018955;product=glutamate--tRNA ligase;protein_id=QIE16934.1;transl_table=11 CP040687.1 Genbank pseudogene 3891191 3892290 . - . ID=gene-IXO1088_018960;Name=IXO1088_018960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018960;pseudo=true CP040687.1 Protein Homology CDS 3891191 3892290 . - 0 ID=cds-IXO1088_018960;Parent=gene-IXO1088_018960;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090626.1;locus_tag=IXO1088_018960;product=DUF3616 domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3892312 3893196 . - . ID=gene-IXO1088_018965;Name=IXO1088_018965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018965 CP040687.1 Protein Homology CDS 3892312 3893196 . - 0 ID=cds-QIE16935.1;Parent=gene-IXO1088_018965;Dbxref=NCBI_GP:QIE16935.1;Name=QIE16935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444381.1;locus_tag=IXO1088_018965;product=carbon-nitrogen hydrolase family protein;protein_id=QIE16935.1;transl_table=11 CP040687.1 Genbank gene 3893314 3893901 . - . ID=gene-IXO1088_018970;Name=IXO1088_018970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018970 CP040687.1 Protein Homology CDS 3893314 3893901 . - 0 ID=cds-QIE16936.1;Parent=gene-IXO1088_018970;Dbxref=NCBI_GP:QIE16936.1;Name=QIE16936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576094.1;locus_tag=IXO1088_018970;product=GNAT family acetyltransferase;protein_id=QIE16936.1;transl_table=11 CP040687.1 Genbank gene 3894133 3894945 . + . ID=gene-IXO1088_018975;Name=IXO1088_018975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018975 CP040687.1 Protein Homology CDS 3894133 3894945 . + 0 ID=cds-QIE16937.1;Parent=gene-IXO1088_018975;Dbxref=NCBI_GP:QIE16937.1;Name=QIE16937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502628.1;locus_tag=IXO1088_018975;product=peptidase C1;protein_id=QIE16937.1;transl_table=11 CP040687.1 Genbank gene 3894976 3896139 . - . ID=gene-IXO1088_018980;Name=IXO1088_018980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018980 CP040687.1 Protein Homology CDS 3894976 3896139 . - 0 ID=cds-QIE16938.1;Parent=gene-IXO1088_018980;Dbxref=NCBI_GP:QIE16938.1;Name=QIE16938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408019.1;locus_tag=IXO1088_018980;product=IS5 family transposase;protein_id=QIE16938.1;transl_table=11 CP040687.1 Genbank pseudogene 3896105 3896185 . - . ID=gene-IXO1088_018985;Name=IXO1088_018985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_018985;pseudo=true CP040687.1 Protein Homology CDS 3896105 3896185 . - 0 ID=cds-IXO1088_018985;Parent=gene-IXO1088_018985;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452529.1;locus_tag=IXO1088_018985;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3896307 3896690 . - . ID=gene-IXO1088_018990;Name=IXO1088_018990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018990 CP040687.1 Protein Homology CDS 3896307 3896690 . - 0 ID=cds-QIE16939.1;Parent=gene-IXO1088_018990;Dbxref=NCBI_GP:QIE16939.1;Name=QIE16939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408014.1;locus_tag=IXO1088_018990;product=hypothetical protein;protein_id=QIE16939.1;transl_table=11 CP040687.1 Genbank gene 3897206 3898018 . + . ID=gene-IXO1088_018995;Name=IXO1088_018995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_018995 CP040687.1 Protein Homology CDS 3897206 3898018 . + 0 ID=cds-QIE16940.1;Parent=gene-IXO1088_018995;Dbxref=NCBI_GP:QIE16940.1;Name=QIE16940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157176.1;locus_tag=IXO1088_018995;product=peptidase C1;protein_id=QIE16940.1;transl_table=11 CP040687.1 Genbank gene 3898079 3899137 . + . ID=gene-IXO1088_019000;Name=IXO1088_019000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019000 CP040687.1 Protein Homology CDS 3898079 3899137 . + 0 ID=cds-QIE16941.1;Parent=gene-IXO1088_019000;Dbxref=NCBI_GP:QIE16941.1;Name=QIE16941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408016.1;locus_tag=IXO1088_019000;product=IS630 family transposase;protein_id=QIE16941.1;transl_table=11 CP040687.1 Genbank pseudogene 3899132 3900302 . - . ID=gene-IXO1088_019005;Name=IXO1088_019005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_019005;pseudo=true CP040687.1 Protein Homology CDS 3899132 3900302 . - 0 ID=cds-IXO1088_019005;Parent=gene-IXO1088_019005;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408015.1;locus_tag=IXO1088_019005;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3900268 3900345 . - . ID=gene-IXO1088_019010;Name=IXO1088_019010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_019010;pseudo=true CP040687.1 Protein Homology CDS 3900268 3900345 . - 0 ID=cds-IXO1088_019010;Parent=gene-IXO1088_019010;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452529.1;locus_tag=IXO1088_019010;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3900452 3900838 . - . ID=gene-IXO1088_019015;Name=IXO1088_019015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019015 CP040687.1 Protein Homology CDS 3900452 3900838 . - 0 ID=cds-QIE16942.1;Parent=gene-IXO1088_019015;Dbxref=NCBI_GP:QIE16942.1;Name=QIE16942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408014.1;locus_tag=IXO1088_019015;product=hypothetical protein;protein_id=QIE16942.1;transl_table=11 CP040687.1 Genbank gene 3901570 3902382 . + . ID=gene-IXO1088_019020;Name=IXO1088_019020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019020 CP040687.1 Protein Homology CDS 3901570 3902382 . + 0 ID=cds-QIE16943.1;Parent=gene-IXO1088_019020;Dbxref=NCBI_GP:QIE16943.1;Name=QIE16943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502628.1;locus_tag=IXO1088_019020;product=peptidase C1;protein_id=QIE16943.1;transl_table=11 CP040687.1 Genbank gene 3902402 3903436 . - . ID=gene-IXO1088_019025;Name=IXO1088_019025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019025 CP040687.1 Protein Homology CDS 3902402 3903436 . - 0 ID=cds-QIE16944.1;Parent=gene-IXO1088_019025;Dbxref=NCBI_GP:QIE16944.1;Name=QIE16944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259143.1;locus_tag=IXO1088_019025;product=IS630 family transposase;protein_id=QIE16944.1;transl_table=11 CP040687.1 Genbank gene 3903592 3904311 . - . ID=gene-IXO1088_019030;Name=IXO1088_019030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019030 CP040687.1 Protein Homology CDS 3903592 3904311 . - 0 ID=cds-QIE16945.1;Parent=gene-IXO1088_019030;Dbxref=NCBI_GP:QIE16945.1;Name=QIE16945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444367.1;locus_tag=IXO1088_019030;product=two-component sensor histidine kinase;protein_id=QIE16945.1;transl_table=11 CP040687.1 Genbank gene 3904380 3905615 . + . ID=gene-IXO1088_019035;Name=IXO1088_019035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019035 CP040687.1 Protein Homology CDS 3904380 3905615 . + 0 ID=cds-QIE16946.1;Parent=gene-IXO1088_019035;Dbxref=NCBI_GP:QIE16946.1;Name=QIE16946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1088_019035;product=ISL3 family transposase;protein_id=QIE16946.1;transl_table=11 CP040687.1 Genbank pseudogene 3905596 3905778 . + . ID=gene-IXO1088_019040;Name=IXO1088_019040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_019040;pseudo=true CP040687.1 Protein Homology CDS 3905596 3905778 . + 0 ID=cds-IXO1088_019040;Parent=gene-IXO1088_019040;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258951.1;locus_tag=IXO1088_019040;product=DNA helicase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 3905790 3905888 . - . ID=gene-IXO1088_019045;Name=IXO1088_019045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_019045;pseudo=true CP040687.1 Protein Homology CDS 3905790 3905888 . - 0 ID=cds-IXO1088_019045;Parent=gene-IXO1088_019045;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638043.1;locus_tag=IXO1088_019045;product=two-component system response regulator CreB;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3906067 3906975 . + . ID=gene-IXO1088_019050;Name=IXO1088_019050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019050 CP040687.1 Protein Homology CDS 3906067 3906975 . + 0 ID=cds-QIE16947.1;Parent=gene-IXO1088_019050;Dbxref=NCBI_GP:QIE16947.1;Name=QIE16947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638044.1;locus_tag=IXO1088_019050;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=QIE16947.1;transl_table=11 CP040687.1 Genbank gene 3907387 3907929 . + . ID=gene-IXO1088_019055;Name=IXO1088_019055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019055 CP040687.1 Protein Homology CDS 3907387 3907929 . + 0 ID=cds-QIE16948.1;Parent=gene-IXO1088_019055;Dbxref=NCBI_GP:QIE16948.1;Name=QIE16948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638045.1;locus_tag=IXO1088_019055;product=N-acetyltransferase;protein_id=QIE16948.1;transl_table=11 CP040687.1 Genbank gene 3908332 3911796 . + . ID=gene-IXO1088_019060;Name=IXO1088_019060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019060 CP040687.1 Protein Homology CDS 3908332 3911796 . + 0 ID=cds-QIE16949.1;Parent=gene-IXO1088_019060;Dbxref=NCBI_GP:QIE16949.1;Name=QIE16949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090633.1;locus_tag=IXO1088_019060;product=transcription-repair coupling factor;protein_id=QIE16949.1;transl_table=11 CP040687.1 Genbank gene 3912028 3912246 . - . ID=gene-IXO1088_019065;Name=IXO1088_019065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019065 CP040687.1 GeneMarkS-2+ CDS 3912028 3912246 . - 0 ID=cds-QIE16950.1;Parent=gene-IXO1088_019065;Dbxref=NCBI_GP:QIE16950.1;Name=QIE16950.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_019065;product=hypothetical protein;protein_id=QIE16950.1;transl_table=11 CP040687.1 Genbank gene 3912286 3912615 . + . ID=gene-IXO1088_019070;Name=IXO1088_019070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019070 CP040687.1 Protein Homology CDS 3912286 3912615 . + 0 ID=cds-QIE16951.1;Parent=gene-IXO1088_019070;Dbxref=NCBI_GP:QIE16951.1;Name=QIE16951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016905011.1;locus_tag=IXO1088_019070;product=STAS domain-containing protein;protein_id=QIE16951.1;transl_table=11 CP040687.1 Genbank gene 3912634 3914655 . + . ID=gene-IXO1088_019075;Name=IXO1088_019075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019075 CP040687.1 Protein Homology CDS 3912634 3914655 . + 0 ID=cds-QIE16952.1;Parent=gene-IXO1088_019075;Dbxref=NCBI_GP:QIE16952.1;Name=QIE16952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576106.1;locus_tag=IXO1088_019075;product=chemotaxis protein CheA;protein_id=QIE16952.1;transl_table=11 CP040687.1 Genbank gene 3914630 3914812 . - . ID=gene-IXO1088_019080;Name=IXO1088_019080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019080 CP040687.1 Protein Homology CDS 3914630 3914812 . - 0 ID=cds-QIE16953.1;Parent=gene-IXO1088_019080;Dbxref=NCBI_GP:QIE16953.1;Name=QIE16953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502621.1;locus_tag=IXO1088_019080;product=hypothetical protein;protein_id=QIE16953.1;transl_table=11 CP040687.1 Genbank gene 3914724 3916886 . + . ID=gene-IXO1088_019085;Name=IXO1088_019085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019085 CP040687.1 Protein Homology CDS 3914724 3916886 . + 0 ID=cds-QIE16954.1;Parent=gene-IXO1088_019085;Dbxref=NCBI_GP:QIE16954.1;Name=QIE16954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971660.1;locus_tag=IXO1088_019085;product=methyl-accepting chemotaxis protein;protein_id=QIE16954.1;transl_table=11 CP040687.1 Genbank gene 3916897 3917412 . + . ID=gene-IXO1088_019090;Name=IXO1088_019090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019090 CP040687.1 Protein Homology CDS 3916897 3917412 . + 0 ID=cds-QIE16955.1;Parent=gene-IXO1088_019090;Dbxref=NCBI_GP:QIE16955.1;Name=QIE16955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502619.1;locus_tag=IXO1088_019090;product=purine-binding chemotaxis protein CheW;protein_id=QIE16955.1;transl_table=11 CP040687.1 Genbank gene 3917439 3918722 . + . ID=gene-IXO1088_019095;Name=IXO1088_019095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019095 CP040687.1 Protein Homology CDS 3917439 3918722 . + 0 ID=cds-QIE16956.1;Parent=gene-IXO1088_019095;Dbxref=NCBI_GP:QIE16956.1;Name=QIE16956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010375512.1;locus_tag=IXO1088_019095;product=EAL domain-containing response regulator;protein_id=QIE16956.1;transl_table=11 CP040687.1 Genbank gene 3918706 3919533 . + . ID=gene-IXO1088_019100;Name=IXO1088_019100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019100 CP040687.1 Protein Homology CDS 3918706 3919533 . + 0 ID=cds-QIE16957.1;Parent=gene-IXO1088_019100;Dbxref=NCBI_GP:QIE16957.1;Name=QIE16957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638052.1;locus_tag=IXO1088_019100;product=protein-glutamate O-methyltransferase CheR;protein_id=QIE16957.1;transl_table=11 CP040687.1 Genbank gene 3919548 3920669 . + . ID=gene-IXO1088_019105;Name=IXO1088_019105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019105 CP040687.1 Protein Homology CDS 3919548 3920669 . + 0 ID=cds-QIE18073.1;Parent=gene-IXO1088_019105;Dbxref=NCBI_GP:QIE18073.1;Name=QIE18073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913233.1;locus_tag=IXO1088_019105;product=chemotaxis response regulator protein-glutamate methylesterase;protein_id=QIE18073.1;transl_table=11 CP040687.1 Genbank pseudogene 3920838 3922398 . - . ID=gene-IXO1088_019110;Name=IXO1088_019110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_019110;pseudo=true CP040687.1 Protein Homology CDS 3920838 3922398 . - 0 ID=cds-IXO1088_019110;Parent=gene-IXO1088_019110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638054.1;locus_tag=IXO1088_019110;product=phospholipase D family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3922617 3924674 . - . ID=gene-IXO1088_019115;Name=IXO1088_019115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019115 CP040687.1 Protein Homology CDS 3922617 3924674 . - 0 ID=cds-QIE16958.1;Parent=gene-IXO1088_019115;Dbxref=NCBI_GP:QIE16958.1;Name=QIE16958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408003.1;locus_tag=IXO1088_019115;product=M13 family peptidase;protein_id=QIE16958.1;transl_table=11 CP040687.1 Genbank gene 3925018 3925272 . - . ID=gene-IXO1088_019120;Name=IXO1088_019120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019120 CP040687.1 Protein Homology CDS 3925018 3925272 . - 0 ID=cds-QIE18074.1;Parent=gene-IXO1088_019120;Dbxref=NCBI_GP:QIE18074.1;Name=QIE18074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157192.1;locus_tag=IXO1088_019120;product=hypothetical protein;protein_id=QIE18074.1;transl_table=11 CP040687.1 Genbank gene 3925351 3925426 . + . ID=gene-IXO1088_019125;Name=IXO1088_019125;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_019125 CP040687.1 cmsearch ncRNA 3925351 3925426 . + . ID=rna-IXO1088_019125;Parent=gene-IXO1088_019125;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_019125;product=sX9 sRNA CP040687.1 cmsearch exon 3925351 3925426 . + . ID=exon-IXO1088_019125-1;Parent=rna-IXO1088_019125;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_019125;product=sX9 sRNA CP040687.1 Genbank gene 3925621 3926370 . - . ID=gene-IXO1088_019130;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=IXO1088_019130 CP040687.1 Protein Homology CDS 3925621 3926370 . - 0 ID=cds-QIE16959.1;Parent=gene-IXO1088_019130;Dbxref=NCBI_GP:QIE16959.1;Name=QIE16959.1;gbkey=CDS;gene=gpmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167506.1;locus_tag=IXO1088_019130;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=QIE16959.1;transl_table=11 CP040687.1 Genbank gene 3926474 3927187 . + . ID=gene-IXO1088_019135;Name=IXO1088_019135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019135 CP040687.1 Protein Homology CDS 3926474 3927187 . + 0 ID=cds-QIE18075.1;Parent=gene-IXO1088_019135;Dbxref=NCBI_GP:QIE18075.1;Name=QIE18075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444354.1;locus_tag=IXO1088_019135;product=deoxyribonuclease V;protein_id=QIE18075.1;transl_table=11 CP040687.1 Genbank gene 3927259 3927771 . + . ID=gene-IXO1088_019140;Name=IXO1088_019140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019140 CP040687.1 GeneMarkS-2+ CDS 3927259 3927771 . + 0 ID=cds-QIE16960.1;Parent=gene-IXO1088_019140;Dbxref=NCBI_GP:QIE16960.1;Name=QIE16960.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_019140;product=hypothetical protein;protein_id=QIE16960.1;transl_table=11 CP040687.1 Genbank gene 3927949 3928839 . + . ID=gene-IXO1088_019145;Name=IXO1088_019145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019145 CP040687.1 Protein Homology CDS 3927949 3928839 . + 0 ID=cds-QIE16961.1;Parent=gene-IXO1088_019145;Dbxref=NCBI_GP:QIE16961.1;Name=QIE16961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638062.1;locus_tag=IXO1088_019145;product=pirin family protein;protein_id=QIE16961.1;transl_table=11 CP040687.1 Genbank gene 3929086 3929547 . + . ID=gene-IXO1088_019150;Name=IXO1088_019150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019150 CP040687.1 Protein Homology CDS 3929086 3929547 . + 0 ID=cds-QIE16962.1;Parent=gene-IXO1088_019150;Dbxref=NCBI_GP:QIE16962.1;Name=QIE16962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638063.1;locus_tag=IXO1088_019150;product=hypothetical protein;protein_id=QIE16962.1;transl_table=11 CP040687.1 Genbank pseudogene 3929627 3929867 . - . ID=gene-IXO1088_019155;Name=IXO1088_019155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_019155;pseudo=true CP040687.1 Protein Homology CDS 3929627 3929867 . - 0 ID=cds-IXO1088_019155;Parent=gene-IXO1088_019155;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369461.1;locus_tag=IXO1088_019155;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3929879 3932287 . - . ID=gene-IXO1088_019160;Name=IXO1088_019160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019160 CP040687.1 Protein Homology CDS 3929879 3932287 . - 0 ID=cds-QIE16963.1;Parent=gene-IXO1088_019160;Dbxref=NCBI_GP:QIE16963.1;Name=QIE16963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502594.1;locus_tag=IXO1088_019160;product=DUF2235 domain-containing protein;protein_id=QIE16963.1;transl_table=11 CP040687.1 Genbank gene 3932284 3932517 . - . ID=gene-IXO1088_019165;Name=IXO1088_019165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019165 CP040687.1 Protein Homology CDS 3932284 3932517 . - 0 ID=cds-QIE16964.1;Parent=gene-IXO1088_019165;Dbxref=NCBI_GP:QIE16964.1;Name=QIE16964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502589.1;locus_tag=IXO1088_019165;product=DUF3304 domain-containing protein;protein_id=QIE16964.1;transl_table=11 CP040687.1 Genbank gene 3932875 3933837 . - . ID=gene-IXO1088_019170;Name=IXO1088_019170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019170 CP040687.1 Protein Homology CDS 3932875 3933837 . - 0 ID=cds-QIE16965.1;Parent=gene-IXO1088_019170;Dbxref=NCBI_GP:QIE16965.1;Name=QIE16965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1088_019170;product=IS1595-like element ISXo2 family transposase;protein_id=QIE16965.1;transl_table=11 CP040687.1 Genbank gene 3934061 3934747 . - . ID=gene-IXO1088_019175;Name=IXO1088_019175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019175 CP040687.1 Protein Homology CDS 3934061 3934747 . - 0 ID=cds-QIE16966.1;Parent=gene-IXO1088_019175;Dbxref=NCBI_GP:QIE16966.1;Name=QIE16966.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11745.6;locus_tag=IXO1088_019175;product=DUF3304 domain-containing protein;protein_id=QIE16966.1;transl_table=11 CP040687.1 Genbank gene 3934708 3935568 . - . ID=gene-IXO1088_019180;Name=IXO1088_019180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019180 CP040687.1 Protein Homology CDS 3934708 3935568 . - 0 ID=cds-QIE18076.1;Parent=gene-IXO1088_019180;Dbxref=NCBI_GP:QIE18076.1;Name=QIE18076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502588.1;locus_tag=IXO1088_019180;product=DUF4123 domain-containing protein;protein_id=QIE18076.1;transl_table=11 CP040687.1 Genbank gene 3935623 3938049 . - . ID=gene-IXO1088_019185;Name=IXO1088_019185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019185 CP040687.1 Protein Homology CDS 3935623 3938049 . - 0 ID=cds-QIE16967.1;Parent=gene-IXO1088_019185;Dbxref=NCBI_GP:QIE16967.1;Name=QIE16967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407986.1;locus_tag=IXO1088_019185;product=type VI secretion system tip protein VgrG;protein_id=QIE16967.1;transl_table=11 CP040687.1 Genbank gene 3938059 3939471 . - . ID=gene-IXO1088_019190;Name=IXO1088_019190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019190 CP040687.1 Protein Homology CDS 3938059 3939471 . - 0 ID=cds-QIE18077.1;Parent=gene-IXO1088_019190;Dbxref=NCBI_GP:QIE18077.1;Name=QIE18077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502397.1;locus_tag=IXO1088_019190;product=DUF2235 domain-containing protein;protein_id=QIE18077.1;transl_table=11 CP040687.1 Genbank gene 3939461 3940147 . - . ID=gene-IXO1088_019195;Name=IXO1088_019195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019195 CP040687.1 Protein Homology CDS 3939461 3940147 . - 0 ID=cds-QIE16968.1;Parent=gene-IXO1088_019195;Dbxref=NCBI_GP:QIE16968.1;Name=QIE16968.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11745.6;locus_tag=IXO1088_019195;product=DUF3304 domain-containing protein;protein_id=QIE16968.1;transl_table=11 CP040687.1 Genbank gene 3940108 3940968 . - . ID=gene-IXO1088_019200;Name=IXO1088_019200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019200 CP040687.1 Protein Homology CDS 3940108 3940968 . - 0 ID=cds-QIE18078.1;Parent=gene-IXO1088_019200;Dbxref=NCBI_GP:QIE18078.1;Name=QIE18078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502588.1;locus_tag=IXO1088_019200;product=DUF4123 domain-containing protein;protein_id=QIE18078.1;transl_table=11 CP040687.1 Genbank gene 3941023 3943692 . - . ID=gene-IXO1088_019205;Name=tssI;gbkey=Gene;gene=tssI;gene_biotype=protein_coding;locus_tag=IXO1088_019205 CP040687.1 Protein Homology CDS 3941023 3943692 . - 0 ID=cds-QIE16969.1;Parent=gene-IXO1088_019205;Dbxref=NCBI_GP:QIE16969.1;Name=QIE16969.1;gbkey=CDS;gene=tssI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409214.1;locus_tag=IXO1088_019205;product=type VI secretion system tip protein VgrG;protein_id=QIE16969.1;transl_table=11 CP040687.1 Genbank gene 3943878 3944840 . + . ID=gene-IXO1088_019210;Name=IXO1088_019210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019210 CP040687.1 Protein Homology CDS 3943878 3944840 . + 0 ID=cds-QIE16970.1;Parent=gene-IXO1088_019210;Dbxref=NCBI_GP:QIE16970.1;Name=QIE16970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444336.1;locus_tag=IXO1088_019210;product=formylglycine-generating enzyme family protein;protein_id=QIE16970.1;transl_table=11 CP040687.1 Genbank gene 3944893 3947958 . - . ID=gene-IXO1088_019215;Name=IXO1088_019215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019215 CP040687.1 Protein Homology CDS 3944893 3947958 . - 0 ID=cds-QIE16971.1;Parent=gene-IXO1088_019215;Dbxref=NCBI_GP:QIE16971.1;Name=QIE16971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259968.1;locus_tag=IXO1088_019215;product=DNA repair protein;protein_id=QIE16971.1;transl_table=11 CP040687.1 Genbank gene 3947945 3948490 . - . ID=gene-IXO1088_019220;Name=IXO1088_019220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019220 CP040687.1 Protein Homology CDS 3947945 3948490 . - 0 ID=cds-QIE16972.1;Parent=gene-IXO1088_019220;Dbxref=NCBI_GP:QIE16972.1;Name=QIE16972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259969.1;locus_tag=IXO1088_019220;product=DUF2345 domain-containing protein;protein_id=QIE16972.1;transl_table=11 CP040687.1 Genbank gene 3948572 3950314 . - . ID=gene-IXO1088_019225;Name=IXO1088_019225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019225 CP040687.1 Protein Homology CDS 3948572 3950314 . - 0 ID=cds-QIE18079.1;Parent=gene-IXO1088_019225;Dbxref=NCBI_GP:QIE18079.1;Name=QIE18079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305253.1;locus_tag=IXO1088_019225;product=DUF2235 domain-containing protein;protein_id=QIE18079.1;transl_table=11 CP040687.1 Genbank gene 3950401 3950880 . - . ID=gene-IXO1088_019230;Name=IXO1088_019230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019230 CP040687.1 Protein Homology CDS 3950401 3950880 . - 0 ID=cds-QIE18080.1;Parent=gene-IXO1088_019230;Dbxref=NCBI_GP:QIE18080.1;Name=QIE18080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409219.1;locus_tag=IXO1088_019230;product=DUF3304 domain-containing protein;protein_id=QIE18080.1;transl_table=11 CP040687.1 Genbank gene 3950904 3951368 . - . ID=gene-IXO1088_019235;Name=IXO1088_019235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019235 CP040687.1 Protein Homology CDS 3950904 3951368 . - 0 ID=cds-QIE16973.1;Parent=gene-IXO1088_019235;Dbxref=NCBI_GP:QIE16973.1;Name=QIE16973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259972.1;locus_tag=IXO1088_019235;product=DUF3304 domain-containing protein;protein_id=QIE16973.1;transl_table=11 CP040687.1 Genbank gene 3951365 3951688 . - . ID=gene-IXO1088_019240;Name=IXO1088_019240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019240 CP040687.1 Protein Homology CDS 3951365 3951688 . - 0 ID=cds-QIE16974.1;Parent=gene-IXO1088_019240;Dbxref=NCBI_GP:QIE16974.1;Name=QIE16974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002801745.1;locus_tag=IXO1088_019240;product=hypothetical protein;protein_id=QIE16974.1;transl_table=11 CP040687.1 Genbank gene 3951685 3952167 . - . ID=gene-IXO1088_019245;Name=IXO1088_019245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019245 CP040687.1 Protein Homology CDS 3951685 3952167 . - 0 ID=cds-QIE16975.1;Parent=gene-IXO1088_019245;Dbxref=NCBI_GP:QIE16975.1;Name=QIE16975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305252.1;locus_tag=IXO1088_019245;product=DUF3304 domain-containing protein;protein_id=QIE16975.1;transl_table=11 CP040687.1 Genbank gene 3952188 3952652 . - . ID=gene-IXO1088_019250;Name=IXO1088_019250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019250 CP040687.1 Protein Homology CDS 3952188 3952652 . - 0 ID=cds-QIE16976.1;Parent=gene-IXO1088_019250;Dbxref=NCBI_GP:QIE16976.1;Name=QIE16976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259972.1;locus_tag=IXO1088_019250;product=DUF3304 domain-containing protein;protein_id=QIE16976.1;transl_table=11 CP040687.1 Genbank gene 3952649 3953545 . - . ID=gene-IXO1088_019255;Name=IXO1088_019255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019255 CP040687.1 Protein Homology CDS 3952649 3953545 . - 0 ID=cds-QIE16977.1;Parent=gene-IXO1088_019255;Dbxref=NCBI_GP:QIE16977.1;Name=QIE16977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002801745.1;locus_tag=IXO1088_019255;product=DUF4123 domain-containing protein;protein_id=QIE16977.1;transl_table=11 CP040687.1 Genbank gene 3953545 3956361 . - . ID=gene-IXO1088_019260;Name=IXO1088_019260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019260 CP040687.1 Protein Homology CDS 3953545 3956361 . - 0 ID=cds-QIE16978.1;Parent=gene-IXO1088_019260;Dbxref=NCBI_GP:QIE16978.1;Name=QIE16978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409222.1;locus_tag=IXO1088_019260;product=type VI secretion system tip protein VgrG;protein_id=QIE16978.1;transl_table=11 CP040687.1 Genbank pseudogene 3956482 3956803 . - . ID=gene-IXO1088_019265;Name=IXO1088_019265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_019265;pseudo=true CP040687.1 Protein Homology CDS 3956482 3956803 . - 0 ID=cds-IXO1088_019265;Parent=gene-IXO1088_019265;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303223.1;locus_tag=IXO1088_019265;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3957311 3958384 . + . ID=gene-IXO1088_019270;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=IXO1088_019270 CP040687.1 Protein Homology CDS 3957311 3958384 . + 0 ID=cds-QIE16979.1;Parent=gene-IXO1088_019270;Dbxref=NCBI_GP:QIE16979.1;Name=QIE16979.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003471063.1;locus_tag=IXO1088_019270;product=type VI secretion system protein TssA;protein_id=QIE16979.1;transl_table=11 CP040687.1 Genbank gene 3958437 3959255 . - . ID=gene-IXO1088_019275;Name=IXO1088_019275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019275 CP040687.1 Protein Homology CDS 3958437 3959255 . - 0 ID=cds-QIE16980.1;Parent=gene-IXO1088_019275;Dbxref=NCBI_GP:QIE16980.1;Name=QIE16980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444331.1;locus_tag=IXO1088_019275;product=OmpA family protein;protein_id=QIE16980.1;transl_table=11 CP040687.1 Genbank gene 3959252 3960235 . - . ID=gene-IXO1088_019280;Name=tagF;gbkey=Gene;gene=tagF;gene_biotype=protein_coding;locus_tag=IXO1088_019280 CP040687.1 Protein Homology CDS 3959252 3960235 . - 0 ID=cds-QIE16981.1;Parent=gene-IXO1088_019280;Dbxref=NCBI_GP:QIE16981.1;Name=QIE16981.1;gbkey=CDS;gene=tagF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259979.1;locus_tag=IXO1088_019280;product=type VI secretion system-associated protein TagF;protein_id=QIE16981.1;transl_table=11 CP040687.1 Genbank gene 3960232 3963969 . - . ID=gene-IXO1088_019285;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=IXO1088_019285 CP040687.1 Protein Homology CDS 3960232 3963969 . - 0 ID=cds-QIE16982.1;Parent=gene-IXO1088_019285;Dbxref=NCBI_GP:QIE16982.1;Name=QIE16982.1;gbkey=CDS;gene=tssM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002801812.1;locus_tag=IXO1088_019285;product=type VI secretion system membrane subunit TssM;protein_id=QIE16982.1;transl_table=11 CP040687.1 Genbank gene 3963985 3965466 . - . ID=gene-IXO1088_019290;Name=IXO1088_019290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019290 CP040687.1 Protein Homology CDS 3963985 3965466 . - 0 ID=cds-QIE18081.1;Parent=gene-IXO1088_019290;Dbxref=NCBI_GP:QIE18081.1;Name=QIE18081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444329.1;locus_tag=IXO1088_019290;product=hypothetical protein;protein_id=QIE18081.1;transl_table=11 CP040687.1 Genbank gene 3965526 3965786 . - . ID=gene-IXO1088_019295;Name=IXO1088_019295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019295 CP040687.1 Protein Homology CDS 3965526 3965786 . - 0 ID=cds-QIE16983.1;Parent=gene-IXO1088_019295;Dbxref=NCBI_GP:QIE16983.1;Name=QIE16983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003471049.1;locus_tag=IXO1088_019295;product=PAAR domain-containing protein;protein_id=QIE16983.1;transl_table=11 CP040687.1 Genbank gene 3965896 3966774 . - . ID=gene-IXO1088_019300;Name=IXO1088_019300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019300 CP040687.1 Protein Homology CDS 3965896 3966774 . - 0 ID=cds-QIE16984.1;Parent=gene-IXO1088_019300;Dbxref=NCBI_GP:QIE16984.1;Name=QIE16984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002801819.1;locus_tag=IXO1088_019300;product=M15 family metallopeptidase;protein_id=QIE16984.1;transl_table=11 CP040687.1 Genbank gene 3966974 3967705 . + . ID=gene-IXO1088_019305;Name=IXO1088_019305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019305 CP040687.1 Protein Homology CDS 3966974 3967705 . + 0 ID=cds-QIE18082.1;Parent=gene-IXO1088_019305;Dbxref=NCBI_GP:QIE18082.1;Name=QIE18082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409229.1;locus_tag=IXO1088_019305;product=hypothetical protein;protein_id=QIE18082.1;transl_table=11 CP040687.1 Genbank pseudogene 3967968 3968126 . + . ID=gene-IXO1088_019310;Name=IXO1088_019310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_019310;pseudo=true CP040687.1 Protein Homology CDS 3967968 3968126 . + 0 ID=cds-IXO1088_019310;Parent=gene-IXO1088_019310;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612143.1;locus_tag=IXO1088_019310;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3968722 3969924 . - . ID=gene-IXO1088_019315;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=IXO1088_019315 CP040687.1 Protein Homology CDS 3968722 3969924 . - 0 ID=cds-QIE16985.1;Parent=gene-IXO1088_019315;Dbxref=NCBI_GP:QIE16985.1;Name=QIE16985.1;gbkey=CDS;gene=purT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472403.1;locus_tag=IXO1088_019315;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=QIE16985.1;transl_table=11 CP040687.1 Genbank pseudogene 3970124 3970531 . + . ID=gene-IXO1088_019320;Name=IXO1088_019320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_019320;pseudo=true CP040687.1 Protein Homology CDS 3970124 3970531 . + 0 ID=cds-IXO1088_019320;Parent=gene-IXO1088_019320;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636511.2;locus_tag=IXO1088_019320;product=SPFH domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3970541 3970825 . + . ID=gene-IXO1088_019325;Name=IXO1088_019325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019325 CP040687.1 Protein Homology CDS 3970541 3970825 . + 0 ID=cds-QIE16986.1;Parent=gene-IXO1088_019325;Dbxref=NCBI_GP:QIE16986.1;Name=QIE16986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409232.1;locus_tag=IXO1088_019325;product=hypothetical protein;protein_id=QIE16986.1;transl_table=11 CP040687.1 Genbank gene 3970822 3971001 . + . ID=gene-IXO1088_019330;Name=IXO1088_019330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019330 CP040687.1 Protein Homology CDS 3970822 3971001 . + 0 ID=cds-QIE16987.1;Parent=gene-IXO1088_019330;Dbxref=NCBI_GP:QIE16987.1;Name=QIE16987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003468944.1;locus_tag=IXO1088_019330;product=Arc family DNA-binding protein;protein_id=QIE16987.1;transl_table=11 CP040687.1 Genbank gene 3971132 3971929 . + . ID=gene-IXO1088_019335;Name=IXO1088_019335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019335 CP040687.1 Protein Homology CDS 3971132 3971929 . + 0 ID=cds-QIE16988.1;Parent=gene-IXO1088_019335;Dbxref=NCBI_GP:QIE16988.1;Name=QIE16988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259989.1;locus_tag=IXO1088_019335;product=D-alanyl-D-alanine carboxypeptidase family protein;protein_id=QIE16988.1;transl_table=11 CP040687.1 Genbank gene 3971993 3972667 . - . ID=gene-IXO1088_019340;Name=IXO1088_019340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019340 CP040687.1 Protein Homology CDS 3971993 3972667 . - 0 ID=cds-QIE16989.1;Parent=gene-IXO1088_019340;Dbxref=NCBI_GP:QIE16989.1;Name=QIE16989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574704.1;locus_tag=IXO1088_019340;product=DNA-3-methyladenine glycosylase 2 family protein;protein_id=QIE16989.1;transl_table=11 CP040687.1 Genbank gene 3972670 3973074 . - . ID=gene-IXO1088_019345;Name=IXO1088_019345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019345 CP040687.1 Protein Homology CDS 3972670 3973074 . - 0 ID=cds-QIE16990.1;Parent=gene-IXO1088_019345;Dbxref=NCBI_GP:QIE16990.1;Name=QIE16990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259991.1;locus_tag=IXO1088_019345;product=DUF423 domain-containing protein;protein_id=QIE16990.1;transl_table=11 CP040687.1 Genbank gene 3973138 3974319 . - . ID=gene-IXO1088_019350;Name=IXO1088_019350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019350 CP040687.1 Protein Homology CDS 3973138 3974319 . - 0 ID=cds-QIE16991.1;Parent=gene-IXO1088_019350;Dbxref=NCBI_GP:QIE16991.1;Name=QIE16991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636504.1;locus_tag=IXO1088_019350;product=polyketide cyclase;protein_id=QIE16991.1;transl_table=11 CP040687.1 Genbank gene 3974670 3975311 . - . ID=gene-IXO1088_019355;Name=IXO1088_019355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019355 CP040687.1 Protein Homology CDS 3974670 3975311 . - 0 ID=cds-QIE16992.1;Parent=gene-IXO1088_019355;Dbxref=NCBI_GP:QIE16992.1;Name=QIE16992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002807809.1;locus_tag=IXO1088_019355;product=response regulator transcription factor;protein_id=QIE16992.1;transl_table=11 CP040687.1 Genbank gene 3975311 3976507 . - . ID=gene-IXO1088_019360;Name=IXO1088_019360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019360 CP040687.1 Protein Homology CDS 3975311 3976507 . - 0 ID=cds-QIE16993.1;Parent=gene-IXO1088_019360;Dbxref=NCBI_GP:QIE16993.1;Name=QIE16993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171659.1;locus_tag=IXO1088_019360;product=sensor histidine kinase;protein_id=QIE16993.1;transl_table=11 CP040687.1 Genbank gene 3976562 3977360 . + . ID=gene-IXO1088_019365;Name=IXO1088_019365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019365 CP040687.1 Protein Homology CDS 3976562 3976833 . + 0 ID=cds-QIE16994.1;Parent=gene-IXO1088_019365;Dbxref=NCBI_GP:QIE16994.1;Name=QIE16994.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_019365;product=IS5 family transposase;protein_id=QIE16994.1;transl_table=11 CP040687.1 Protein Homology CDS 3976832 3977360 . + 1 ID=cds-QIE16994.1;Parent=gene-IXO1088_019365;Dbxref=NCBI_GP:QIE16994.1;Name=QIE16994.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_019365;product=IS5 family transposase;protein_id=QIE16994.1;transl_table=11 CP040687.1 Genbank gene 3977604 3978200 . + . ID=gene-IXO1088_019370;Name=IXO1088_019370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019370 CP040687.1 Protein Homology CDS 3977604 3978200 . + 0 ID=cds-QIE16995.1;Parent=gene-IXO1088_019370;Dbxref=NCBI_GP:QIE16995.1;Name=QIE16995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636501.2;locus_tag=IXO1088_019370;product=GNAT family N-acetyltransferase;protein_id=QIE16995.1;transl_table=11 CP040687.1 Genbank gene 3978205 3978945 . + . ID=gene-IXO1088_019375;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=IXO1088_019375 CP040687.1 Protein Homology CDS 3978205 3978945 . + 0 ID=cds-QIE16996.1;Parent=gene-IXO1088_019375;Dbxref=NCBI_GP:QIE16996.1;Name=QIE16996.1;gbkey=CDS;gene=minC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007973818.1;locus_tag=IXO1088_019375;product=septum site-determining protein MinC;protein_id=QIE16996.1;transl_table=11 CP040687.1 Genbank gene 3978981 3979790 . + . ID=gene-IXO1088_019380;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=IXO1088_019380 CP040687.1 Protein Homology CDS 3978981 3979790 . + 0 ID=cds-QIE16997.1;Parent=gene-IXO1088_019380;Dbxref=NCBI_GP:QIE16997.1;Name=QIE16997.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006424120.1;locus_tag=IXO1088_019380;product=septum site-determining protein MinD;protein_id=QIE16997.1;transl_table=11 CP040687.1 Genbank gene 3979793 3980050 . + . ID=gene-IXO1088_019385;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=IXO1088_019385 CP040687.1 Protein Homology CDS 3979793 3980050 . + 0 ID=cds-QIE16998.1;Parent=gene-IXO1088_019385;Dbxref=NCBI_GP:QIE16998.1;Name=QIE16998.1;gbkey=CDS;gene=minE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636498.1;locus_tag=IXO1088_019385;product=cell division topological specificity factor MinE;protein_id=QIE16998.1;transl_table=11 CP040687.1 Genbank gene 3980119 3980610 . + . ID=gene-IXO1088_019390;Name=IXO1088_019390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019390 CP040687.1 Protein Homology CDS 3980119 3980610 . + 0 ID=cds-QIE16999.1;Parent=gene-IXO1088_019390;Dbxref=NCBI_GP:QIE16999.1;Name=QIE16999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484372.1;locus_tag=IXO1088_019390;product=hypothetical protein;protein_id=QIE16999.1;transl_table=11 CP040687.1 Genbank gene 3980762 3982054 . - . ID=gene-IXO1088_019395;Name=IXO1088_019395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019395 CP040687.1 Protein Homology CDS 3980762 3982054 . - 0 ID=cds-QIE17000.1;Parent=gene-IXO1088_019395;Dbxref=NCBI_GP:QIE17000.1;Name=QIE17000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303739.1;locus_tag=IXO1088_019395;product=HAMP domain-containing histidine kinase;protein_id=QIE17000.1;transl_table=11 CP040687.1 Genbank gene 3982047 3982763 . - . ID=gene-IXO1088_019400;Name=IXO1088_019400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019400 CP040687.1 Protein Homology CDS 3982047 3982763 . - 0 ID=cds-QIE17001.1;Parent=gene-IXO1088_019400;Dbxref=NCBI_GP:QIE17001.1;Name=QIE17001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484375.1;locus_tag=IXO1088_019400;product=response regulator transcription factor;protein_id=QIE17001.1;transl_table=11 CP040687.1 Genbank gene 3982982 3984715 . + . ID=gene-IXO1088_019405;Name=IXO1088_019405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019405 CP040687.1 Protein Homology CDS 3982982 3984715 . + 0 ID=cds-QIE17002.1;Parent=gene-IXO1088_019405;Dbxref=NCBI_GP:QIE17002.1;Name=QIE17002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930293.1;locus_tag=IXO1088_019405;product=glycosyltransferase family 39 protein;protein_id=QIE17002.1;transl_table=11 CP040687.1 Genbank gene 3984815 3985579 . + . ID=gene-IXO1088_019410;Name=IXO1088_019410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019410 CP040687.1 Protein Homology CDS 3984815 3985579 . + 0 ID=cds-QIE17003.1;Parent=gene-IXO1088_019410;Dbxref=NCBI_GP:QIE17003.1;Name=QIE17003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089620.1;locus_tag=IXO1088_019410;product=phosphatase PAP2 family protein;protein_id=QIE17003.1;transl_table=11 CP040687.1 Genbank gene 3985576 3987246 . + . ID=gene-IXO1088_019415;Name=IXO1088_019415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019415 CP040687.1 Protein Homology CDS 3985576 3987246 . + 0 ID=cds-QIE17004.1;Parent=gene-IXO1088_019415;Dbxref=NCBI_GP:QIE17004.1;Name=QIE17004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008577029.1;locus_tag=IXO1088_019415;product=phosphoethanolamine transferase;protein_id=QIE17004.1;transl_table=11 CP040687.1 Genbank gene 3987358 3989376 . + . ID=gene-IXO1088_019420;Name=IXO1088_019420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019420 CP040687.1 Protein Homology CDS 3987358 3989376 . + 0 ID=cds-QIE17005.1;Parent=gene-IXO1088_019420;Dbxref=NCBI_GP:QIE17005.1;Name=QIE17005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113617.1;locus_tag=IXO1088_019420;product=M2 family metallopeptidase;protein_id=QIE17005.1;transl_table=11 CP040687.1 Genbank gene 3989458 3989862 . - . ID=gene-IXO1088_019425;Name=IXO1088_019425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019425 CP040687.1 Protein Homology CDS 3989458 3989862 . - 0 ID=cds-QIE17006.1;Parent=gene-IXO1088_019425;Dbxref=NCBI_GP:QIE17006.1;Name=QIE17006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154690.1;locus_tag=IXO1088_019425;product=hypothetical protein;protein_id=QIE17006.1;transl_table=11 CP040687.1 Genbank pseudogene 3989879 3990909 . - . ID=gene-IXO1088_019430;Name=IXO1088_019430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_019430;pseudo=true CP040687.1 Protein Homology CDS 3989879 3990909 . - 0 ID=cds-IXO1088_019430;Parent=gene-IXO1088_019430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930283.1;locus_tag=IXO1088_019430;product=multidrug effflux MFS transporter;pseudo=true;transl_table=11 CP040687.1 Genbank gene 3991204 3993363 . - . ID=gene-IXO1088_019435;Name=IXO1088_019435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019435 CP040687.1 Protein Homology CDS 3991204 3993363 . - 0 ID=cds-QIE17007.1;Parent=gene-IXO1088_019435;Dbxref=NCBI_GP:QIE17007.1;Name=QIE17007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302887.1;locus_tag=IXO1088_019435;product=peptidase domain-containing ABC transporter;protein_id=QIE17007.1;transl_table=11 CP040687.1 Genbank gene 3993360 3994571 . - . ID=gene-IXO1088_019440;Name=IXO1088_019440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019440 CP040687.1 Protein Homology CDS 3993360 3994571 . - 0 ID=cds-QIE18083.1;Parent=gene-IXO1088_019440;Dbxref=NCBI_GP:QIE18083.1;Name=QIE18083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379097.1;locus_tag=IXO1088_019440;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=QIE18083.1;transl_table=11 CP040687.1 Genbank gene 3994660 3995463 . - . ID=gene-IXO1088_019445;Name=IXO1088_019445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019445 CP040687.1 Protein Homology CDS 3994660 3995463 . - 0 ID=cds-QIE17008.1;Parent=gene-IXO1088_019445;Dbxref=NCBI_GP:QIE17008.1;Name=QIE17008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160223.1;locus_tag=IXO1088_019445;product=sulfotransferase;protein_id=QIE17008.1;transl_table=11 CP040687.1 Genbank gene 3995894 3996076 . + . ID=gene-IXO1088_019450;Name=IXO1088_019450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019450 CP040687.1 Protein Homology CDS 3995894 3996076 . + 0 ID=cds-QIE17009.1;Parent=gene-IXO1088_019450;Dbxref=NCBI_GP:QIE17009.1;Name=QIE17009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154694.1;locus_tag=IXO1088_019450;product=hypothetical protein;protein_id=QIE17009.1;transl_table=11 CP040687.1 cmsearch riboswitch 3996330 3996444 . + . ID=id-CP040687.1:3996330..3996444;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP040687.1 Genbank gene 3996544 3999498 . + . ID=gene-IXO1088_019455;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=IXO1088_019455 CP040687.1 Protein Homology CDS 3996544 3999498 . + 0 ID=cds-QIE17010.1;Parent=gene-IXO1088_019455;Dbxref=NCBI_GP:QIE17010.1;Name=QIE17010.1;gbkey=CDS;gene=gcvP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050782.1;locus_tag=IXO1088_019455;product=aminomethyl-transferring glycine dehydrogenase;protein_id=QIE17010.1;transl_table=11 CP040687.1 Genbank gene 3999558 3999740 . + . ID=gene-IXO1088_019460;Name=IXO1088_019460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019460 CP040687.1 Protein Homology CDS 3999558 3999740 . + 0 ID=cds-QIE17011.1;Parent=gene-IXO1088_019460;Dbxref=NCBI_GP:QIE17011.1;Name=QIE17011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502349.1;locus_tag=IXO1088_019460;product=hypothetical protein;protein_id=QIE17011.1;transl_table=11 CP040687.1 Genbank gene 3999828 4000277 . + . ID=gene-IXO1088_019465;Name=IXO1088_019465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019465 CP040687.1 Protein Homology CDS 3999828 4000277 . + 0 ID=cds-QIE17012.1;Parent=gene-IXO1088_019465;Dbxref=NCBI_GP:QIE17012.1;Name=QIE17012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409249.1;locus_tag=IXO1088_019465;product=PAAR domain-containing protein;protein_id=QIE17012.1;transl_table=11 CP040687.1 Genbank gene 4000274 4000969 . + . ID=gene-IXO1088_019470;Name=IXO1088_019470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019470 CP040687.1 Protein Homology CDS 4000274 4000969 . + 0 ID=cds-QIE17013.1;Parent=gene-IXO1088_019470;Dbxref=NCBI_GP:QIE17013.1;Name=QIE17013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409250.1;locus_tag=IXO1088_019470;product=VRR-NUC domain-containing protein;protein_id=QIE17013.1;transl_table=11 CP040687.1 Genbank gene 4000977 4002047 . + . ID=gene-IXO1088_019475;Name=IXO1088_019475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019475 CP040687.1 Protein Homology CDS 4000977 4002047 . + 0 ID=cds-QIE17014.1;Parent=gene-IXO1088_019475;Dbxref=NCBI_GP:QIE17014.1;Name=QIE17014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409251.1;locus_tag=IXO1088_019475;product=DUF3396 domain-containing protein;protein_id=QIE17014.1;transl_table=11 CP040687.1 Genbank gene 4002044 4003129 . + . ID=gene-IXO1088_019480;Name=IXO1088_019480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019480 CP040687.1 Protein Homology CDS 4002044 4003129 . + 0 ID=cds-QIE17015.1;Parent=gene-IXO1088_019480;Dbxref=NCBI_GP:QIE17015.1;Name=QIE17015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409251.1;locus_tag=IXO1088_019480;product=DUF3396 domain-containing protein;protein_id=QIE17015.1;transl_table=11 CP040687.1 Genbank pseudogene 4003275 4003358 . + . ID=gene-IXO1088_019485;Name=IXO1088_019485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_019485;pseudo=true CP040687.1 Protein Homology CDS 4003275 4003358 . + 0 ID=cds-IXO1088_019485;Parent=gene-IXO1088_019485;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_019485;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4003390 4004491 . - . ID=gene-IXO1088_019490;Name=IXO1088_019490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_019490;pseudo=true CP040687.1 Protein Homology CDS 4003390 4004491 . - 0 ID=cds-IXO1088_019490;Parent=gene-IXO1088_019490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=IXO1088_019490;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4004530 4005486 . - . ID=gene-IXO1088_019495;Name=IXO1088_019495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019495 CP040687.1 Protein Homology CDS 4004530 4005486 . - 0 ID=cds-QIE17016.1;Parent=gene-IXO1088_019495;Dbxref=NCBI_GP:QIE17016.1;Name=QIE17016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_082322974.1;locus_tag=IXO1088_019495;product=IS30-like element IS1112 family transposase;protein_id=QIE17016.1;transl_table=11 CP040687.1 Genbank pseudogene 4005581 4006122 . + . ID=gene-IXO1088_019500;Name=IXO1088_019500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_019500;pseudo=true CP040687.1 Protein Homology CDS 4005581 4006122 . + 0 ID=cds-IXO1088_019500;Parent=gene-IXO1088_019500;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_019500;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4006304 4007362 . + . ID=gene-IXO1088_019505;Name=IXO1088_019505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019505 CP040687.1 Protein Homology CDS 4006304 4007362 . + 0 ID=cds-QIE17017.1;Parent=gene-IXO1088_019505;Dbxref=NCBI_GP:QIE17017.1;Name=QIE17017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409255.1;locus_tag=IXO1088_019505;product=IS630 family transposase;protein_id=QIE17017.1;transl_table=11 CP040687.1 Genbank gene 4007496 4007879 . - . ID=gene-IXO1088_019510;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=IXO1088_019510 CP040687.1 Protein Homology CDS 4007496 4007879 . - 0 ID=cds-QIE17018.1;Parent=gene-IXO1088_019510;Dbxref=NCBI_GP:QIE17018.1;Name=QIE17018.1;gbkey=CDS;gene=rplQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636306.1;locus_tag=IXO1088_019510;product=50S ribosomal protein L17;protein_id=QIE17018.1;transl_table=11 CP040687.1 Genbank gene 4008061 4009059 . - . ID=gene-IXO1088_019515;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=IXO1088_019515 CP040687.1 Protein Homology CDS 4008061 4009059 . - 0 ID=cds-QIE17019.1;Parent=gene-IXO1088_019515;Dbxref=NCBI_GP:QIE17019.1;Name=QIE17019.1;gbkey=CDS;gene=rpoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852431.1;locus_tag=IXO1088_019515;product=DNA-directed RNA polymerase subunit alpha;protein_id=QIE17019.1;transl_table=11 CP040687.1 Genbank gene 4009113 4009739 . - . ID=gene-IXO1088_019520;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=IXO1088_019520 CP040687.1 Protein Homology CDS 4009113 4009739 . - 0 ID=cds-QIE17020.1;Parent=gene-IXO1088_019520;Dbxref=NCBI_GP:QIE17020.1;Name=QIE17020.1;gbkey=CDS;gene=rpsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160479.1;locus_tag=IXO1088_019520;product=30S ribosomal protein S4;protein_id=QIE17020.1;transl_table=11 CP040687.1 Genbank gene 4009755 4010147 . - . ID=gene-IXO1088_019525;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=IXO1088_019525 CP040687.1 Protein Homology CDS 4009755 4010147 . - 0 ID=cds-QIE17021.1;Parent=gene-IXO1088_019525;Dbxref=NCBI_GP:QIE17021.1;Name=QIE17021.1;gbkey=CDS;gene=rpsK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014161360.1;locus_tag=IXO1088_019525;product=30S ribosomal protein S11;protein_id=QIE17021.1;transl_table=11 CP040687.1 Genbank gene 4010158 4010514 . - . ID=gene-IXO1088_019530;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=IXO1088_019530 CP040687.1 Protein Homology CDS 4010158 4010514 . - 0 ID=cds-QIE17022.1;Parent=gene-IXO1088_019530;Dbxref=NCBI_GP:QIE17022.1;Name=QIE17022.1;gbkey=CDS;gene=rpsM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159560.1;locus_tag=IXO1088_019530;product=30S ribosomal protein S13;protein_id=QIE17022.1;transl_table=11 CP040687.1 Genbank gene 4010847 4012211 . - . ID=gene-IXO1088_019535;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=IXO1088_019535 CP040687.1 Protein Homology CDS 4010847 4012211 . - 0 ID=cds-QIE17023.1;Parent=gene-IXO1088_019535;Dbxref=NCBI_GP:QIE17023.1;Name=QIE17023.1;gbkey=CDS;gene=secY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636301.1;locus_tag=IXO1088_019535;product=preprotein translocase subunit SecY;protein_id=QIE17023.1;transl_table=11 CP040687.1 Genbank gene 4012219 4012662 . - . ID=gene-IXO1088_019540;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=IXO1088_019540 CP040687.1 Protein Homology CDS 4012219 4012662 . - 0 ID=cds-QIE17024.1;Parent=gene-IXO1088_019540;Dbxref=NCBI_GP:QIE17024.1;Name=QIE17024.1;gbkey=CDS;gene=rplO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486676.1;locus_tag=IXO1088_019540;product=50S ribosomal protein L15;protein_id=QIE17024.1;transl_table=11 CP040687.1 Genbank gene 4012667 4012858 . - . ID=gene-IXO1088_019545;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=IXO1088_019545 CP040687.1 Protein Homology CDS 4012667 4012858 . - 0 ID=cds-QIE17025.1;Parent=gene-IXO1088_019545;Dbxref=NCBI_GP:QIE17025.1;Name=QIE17025.1;gbkey=CDS;gene=rpmD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017355423.1;locus_tag=IXO1088_019545;product=50S ribosomal protein L30;protein_id=QIE17025.1;transl_table=11 CP040687.1 Genbank gene 4012851 4013393 . - . ID=gene-IXO1088_019550;Name=IXO1088_019550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019550 CP040687.1 Protein Homology CDS 4012851 4013393 . - 0 ID=cds-QIE17026.1;Parent=gene-IXO1088_019550;Dbxref=NCBI_GP:QIE17026.1;Name=QIE17026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636298.1;locus_tag=IXO1088_019550;product=30S ribosomal protein S5;protein_id=QIE17026.1;transl_table=11 CP040687.1 Genbank gene 4013552 4013911 . - . ID=gene-IXO1088_019555;Name=IXO1088_019555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019555 CP040687.1 Protein Homology CDS 4013552 4013911 . - 0 ID=cds-QIE17027.1;Parent=gene-IXO1088_019555;Dbxref=NCBI_GP:QIE17027.1;Name=QIE17027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636297.1;locus_tag=IXO1088_019555;product=50S ribosomal protein L18;protein_id=QIE17027.1;transl_table=11 CP040687.1 Genbank gene 4014000 4014527 . - . ID=gene-IXO1088_019560;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=IXO1088_019560 CP040687.1 Protein Homology CDS 4014000 4014527 . - 0 ID=cds-QIE17028.1;Parent=gene-IXO1088_019560;Dbxref=NCBI_GP:QIE17028.1;Name=QIE17028.1;gbkey=CDS;gene=rplF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450642.1;locus_tag=IXO1088_019560;product=50S ribosomal protein L6;protein_id=QIE17028.1;transl_table=11 CP040687.1 Genbank gene 4014543 4014941 . - . ID=gene-IXO1088_019565;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=IXO1088_019565 CP040687.1 Protein Homology CDS 4014543 4014941 . - 0 ID=cds-QIE17029.1;Parent=gene-IXO1088_019565;Dbxref=NCBI_GP:QIE17029.1;Name=QIE17029.1;gbkey=CDS;gene=rpsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005932726.1;locus_tag=IXO1088_019565;product=30S ribosomal protein S8;protein_id=QIE17029.1;transl_table=11 CP040687.1 Genbank gene 4015147 4015452 . - . ID=gene-IXO1088_019570;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=IXO1088_019570 CP040687.1 Protein Homology CDS 4015147 4015452 . - 0 ID=cds-QIE17030.1;Parent=gene-IXO1088_019570;Dbxref=NCBI_GP:QIE17030.1;Name=QIE17030.1;gbkey=CDS;gene=rpsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636294.1;locus_tag=IXO1088_019570;product=30S ribosomal protein S14;protein_id=QIE17030.1;transl_table=11 CP040687.1 Genbank gene 4015471 4016013 . - . ID=gene-IXO1088_019575;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=IXO1088_019575 CP040687.1 Protein Homology CDS 4015471 4016013 . - 0 ID=cds-QIE17031.1;Parent=gene-IXO1088_019575;Dbxref=NCBI_GP:QIE17031.1;Name=QIE17031.1;gbkey=CDS;gene=rplE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636293.1;locus_tag=IXO1088_019575;product=50S ribosomal protein L5;protein_id=QIE17031.1;transl_table=11 CP040687.1 Genbank gene 4016025 4016342 . - . ID=gene-IXO1088_019580;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=IXO1088_019580 CP040687.1 Protein Homology CDS 4016025 4016342 . - 0 ID=cds-QIE17032.1;Parent=gene-IXO1088_019580;Dbxref=NCBI_GP:QIE17032.1;Name=QIE17032.1;gbkey=CDS;gene=rplX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260025.1;locus_tag=IXO1088_019580;product=50S ribosomal protein L24;protein_id=QIE17032.1;transl_table=11 CP040687.1 Genbank gene 4016358 4016726 . - . ID=gene-IXO1088_019585;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=IXO1088_019585 CP040687.1 Protein Homology CDS 4016358 4016726 . - 0 ID=cds-QIE17033.1;Parent=gene-IXO1088_019585;Dbxref=NCBI_GP:QIE17033.1;Name=QIE17033.1;gbkey=CDS;gene=rplN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=IXO1088_019585;product=50S ribosomal protein L14;protein_id=QIE17033.1;transl_table=11 CP040687.1 Genbank gene 4016741 4017010 . - . ID=gene-IXO1088_019590;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=IXO1088_019590 CP040687.1 Protein Homology CDS 4016741 4017010 . - 0 ID=cds-QIE17034.1;Parent=gene-IXO1088_019590;Dbxref=NCBI_GP:QIE17034.1;Name=QIE17034.1;gbkey=CDS;gene=rpsQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811676.1;locus_tag=IXO1088_019590;product=30S ribosomal protein S17;protein_id=QIE17034.1;transl_table=11 CP040687.1 Genbank gene 4017022 4017207 . - . ID=gene-IXO1088_019595;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=IXO1088_019595 CP040687.1 Protein Homology CDS 4017022 4017207 . - 0 ID=cds-QIE17035.1;Parent=gene-IXO1088_019595;Dbxref=NCBI_GP:QIE17035.1;Name=QIE17035.1;gbkey=CDS;gene=rpmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636289.1;locus_tag=IXO1088_019595;product=50S ribosomal protein L29;protein_id=QIE17035.1;transl_table=11 CP040687.1 Genbank gene 4017207 4017620 . - . ID=gene-IXO1088_019600;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=IXO1088_019600 CP040687.1 Protein Homology CDS 4017207 4017620 . - 0 ID=cds-QIE17036.1;Parent=gene-IXO1088_019600;Dbxref=NCBI_GP:QIE17036.1;Name=QIE17036.1;gbkey=CDS;gene=rplP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003479591.1;locus_tag=IXO1088_019600;product=50S ribosomal protein L16;protein_id=QIE17036.1;transl_table=11 CP040687.1 Genbank gene 4017626 4018360 . - . ID=gene-IXO1088_019605;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=IXO1088_019605 CP040687.1 Protein Homology CDS 4017626 4018360 . - 0 ID=cds-QIE17037.1;Parent=gene-IXO1088_019605;Dbxref=NCBI_GP:QIE17037.1;Name=QIE17037.1;gbkey=CDS;gene=rpsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811684.1;locus_tag=IXO1088_019605;product=30S ribosomal protein S3;protein_id=QIE17037.1;transl_table=11 CP040687.1 Genbank gene 4018378 4018713 . - . ID=gene-IXO1088_019610;Name=IXO1088_019610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019610 CP040687.1 Protein Homology CDS 4018378 4018713 . - 0 ID=cds-QIE17038.1;Parent=gene-IXO1088_019610;Dbxref=NCBI_GP:QIE17038.1;Name=QIE17038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486710.1;locus_tag=IXO1088_019610;product=50S ribosomal protein L22;protein_id=QIE17038.1;transl_table=11 CP040687.1 Genbank gene 4018726 4018995 . - . ID=gene-IXO1088_019615;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=IXO1088_019615 CP040687.1 Protein Homology CDS 4018726 4018995 . - 0 ID=cds-QIE17039.1;Parent=gene-IXO1088_019615;Dbxref=NCBI_GP:QIE17039.1;Name=QIE17039.1;gbkey=CDS;gene=rpsS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636285.1;locus_tag=IXO1088_019615;product=30S ribosomal protein S19;protein_id=QIE17039.1;transl_table=11 CP040687.1 Genbank gene 4019002 4019829 . - . ID=gene-IXO1088_019620;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=IXO1088_019620 CP040687.1 Protein Homology CDS 4019002 4019829 . - 0 ID=cds-QIE17040.1;Parent=gene-IXO1088_019620;Dbxref=NCBI_GP:QIE17040.1;Name=QIE17040.1;gbkey=CDS;gene=rplB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009607340.1;locus_tag=IXO1088_019620;product=50S ribosomal protein L2;protein_id=QIE17040.1;transl_table=11 CP040687.1 Genbank gene 4019840 4020139 . - . ID=gene-IXO1088_019625;Name=IXO1088_019625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019625 CP040687.1 Protein Homology CDS 4019840 4020139 . - 0 ID=cds-QIE17041.1;Parent=gene-IXO1088_019625;Dbxref=NCBI_GP:QIE17041.1;Name=QIE17041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636283.1;locus_tag=IXO1088_019625;product=50S ribosomal protein L23;protein_id=QIE17041.1;transl_table=11 CP040687.1 Genbank gene 4020136 4020741 . - . ID=gene-IXO1088_019630;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=IXO1088_019630 CP040687.1 Protein Homology CDS 4020136 4020741 . - 0 ID=cds-QIE18084.1;Parent=gene-IXO1088_019630;Dbxref=NCBI_GP:QIE18084.1;Name=QIE18084.1;gbkey=CDS;gene=rplD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371054.1;locus_tag=IXO1088_019630;product=50S ribosomal protein L4;protein_id=QIE18084.1;transl_table=11 CP040687.1 Genbank gene 4020754 4021404 . - . ID=gene-IXO1088_019635;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=IXO1088_019635 CP040687.1 Protein Homology CDS 4020754 4021404 . - 0 ID=cds-QIE17042.1;Parent=gene-IXO1088_019635;Dbxref=NCBI_GP:QIE17042.1;Name=QIE17042.1;gbkey=CDS;gene=rplC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036123.1;locus_tag=IXO1088_019635;product=50S ribosomal protein L3;protein_id=QIE17042.1;transl_table=11 CP040687.1 Genbank gene 4021416 4021730 . - . ID=gene-IXO1088_019640;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=IXO1088_019640 CP040687.1 Protein Homology CDS 4021416 4021730 . - 0 ID=cds-QIE18085.1;Parent=gene-IXO1088_019640;Dbxref=NCBI_GP:QIE18085.1;Name=QIE18085.1;gbkey=CDS;gene=rpsJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160477.1;locus_tag=IXO1088_019640;product=30S ribosomal protein S10;protein_id=QIE18085.1;transl_table=11 CP040687.1 Genbank pseudogene 4022520 4023191 . + . ID=gene-IXO1088_019645;Name=IXO1088_019645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_019645;pseudo=true CP040687.1 Protein Homology CDS 4022520 4023191 . + 0 ID=cds-IXO1088_019645;Parent=gene-IXO1088_019645;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=IXO1088_019645;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4023507 4024697 . - . ID=gene-IXO1088_019650;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=IXO1088_019650 CP040687.1 Protein Homology CDS 4023507 4024697 . - 0 ID=cds-QIE17043.1;Parent=gene-IXO1088_019650;Dbxref=NCBI_GP:QIE17043.1;Name=QIE17043.1;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636267.1;locus_tag=IXO1088_019650;product=elongation factor Tu;protein_id=QIE17043.1;transl_table=11 CP040687.1 Genbank gene 4024747 4026864 . - . ID=gene-IXO1088_019655;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=IXO1088_019655 CP040687.1 Protein Homology CDS 4024747 4026864 . - 0 ID=cds-QIE17044.1;Parent=gene-IXO1088_019655;Dbxref=NCBI_GP:QIE17044.1;Name=QIE17044.1;gbkey=CDS;gene=fusA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636278.1;locus_tag=IXO1088_019655;product=elongation factor G;protein_id=QIE17044.1;transl_table=11 CP040687.1 Genbank gene 4027003 4027470 . - . ID=gene-IXO1088_019660;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=IXO1088_019660 CP040687.1 Protein Homology CDS 4027003 4027470 . - 0 ID=cds-QIE17045.1;Parent=gene-IXO1088_019660;Dbxref=NCBI_GP:QIE17045.1;Name=QIE17045.1;gbkey=CDS;gene=rpsG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450629.1;locus_tag=IXO1088_019660;product=30S ribosomal protein S7;protein_id=QIE17045.1;transl_table=11 CP040687.1 Genbank gene 4027483 4027857 . - . ID=gene-IXO1088_019665;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=IXO1088_019665 CP040687.1 Protein Homology CDS 4027483 4027857 . - 0 ID=cds-QIE17046.1;Parent=gene-IXO1088_019665;Dbxref=NCBI_GP:QIE17046.1;Name=QIE17046.1;gbkey=CDS;gene=rpsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003469157.1;locus_tag=IXO1088_019665;product=30S ribosomal protein S12;protein_id=QIE17046.1;transl_table=11 CP040687.1 Genbank gene 4028076 4032293 . - . ID=gene-IXO1088_019670;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=IXO1088_019670 CP040687.1 Protein Homology CDS 4028076 4032293 . - 0 ID=cds-QIE17047.1;Parent=gene-IXO1088_019670;Dbxref=NCBI_GP:QIE17047.1;Name=QIE17047.1;gbkey=CDS;gene=rpoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636275.1;locus_tag=IXO1088_019670;product=DNA-directed RNA polymerase subunit beta';protein_id=QIE17047.1;transl_table=11 CP040687.1 Genbank gene 4032444 4036595 . - . ID=gene-IXO1088_019675;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=IXO1088_019675 CP040687.1 Protein Homology CDS 4032444 4036595 . - 0 ID=cds-QIE17048.1;Parent=gene-IXO1088_019675;Dbxref=NCBI_GP:QIE17048.1;Name=QIE17048.1;gbkey=CDS;gene=rpoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930752.1;locus_tag=IXO1088_019675;product=DNA-directed RNA polymerase subunit beta;protein_id=QIE17048.1;transl_table=11 CP040687.1 Genbank gene 4036892 4037260 . - . ID=gene-IXO1088_019680;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=IXO1088_019680 CP040687.1 Protein Homology CDS 4036892 4037260 . - 0 ID=cds-QIE17049.1;Parent=gene-IXO1088_019680;Dbxref=NCBI_GP:QIE17049.1;Name=QIE17049.1;gbkey=CDS;gene=rplL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636273.1;locus_tag=IXO1088_019680;product=50S ribosomal protein L7/L12;protein_id=QIE17049.1;transl_table=11 CP040687.1 Genbank gene 4037315 4037848 . - . ID=gene-IXO1088_019685;Name=IXO1088_019685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019685 CP040687.1 Protein Homology CDS 4037315 4037848 . - 0 ID=cds-QIE17050.1;Parent=gene-IXO1088_019685;Dbxref=NCBI_GP:QIE17050.1;Name=QIE17050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636272.1;locus_tag=IXO1088_019685;product=50S ribosomal protein L10;protein_id=QIE17050.1;transl_table=11 CP040687.1 Genbank gene 4038394 4039092 . - . ID=gene-IXO1088_019690;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=IXO1088_019690 CP040687.1 Protein Homology CDS 4038394 4039092 . - 0 ID=cds-QIE17051.1;Parent=gene-IXO1088_019690;Dbxref=NCBI_GP:QIE17051.1;Name=QIE17051.1;gbkey=CDS;gene=rplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636271.1;locus_tag=IXO1088_019690;product=50S ribosomal protein L1;protein_id=QIE17051.1;transl_table=11 CP040687.1 Genbank gene 4039096 4039524 . - . ID=gene-IXO1088_019695;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=IXO1088_019695 CP040687.1 Protein Homology CDS 4039096 4039524 . - 0 ID=cds-QIE17052.1;Parent=gene-IXO1088_019695;Dbxref=NCBI_GP:QIE17052.1;Name=QIE17052.1;gbkey=CDS;gene=rplK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993334.1;locus_tag=IXO1088_019695;product=50S ribosomal protein L11;protein_id=QIE17052.1;transl_table=11 CP040687.1 Genbank gene 4039425 4039676 . - . ID=gene-IXO1088_019700;Name=IXO1088_019700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019700 CP040687.1 Protein Homology CDS 4039425 4039676 . - 0 ID=cds-QIE17053.1;Parent=gene-IXO1088_019700;Dbxref=NCBI_GP:QIE17053.1;Name=QIE17053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165845.1;locus_tag=IXO1088_019700;product=hypothetical protein;protein_id=QIE17053.1;transl_table=11 CP040687.1 Genbank gene 4039721 4040278 . - . ID=gene-IXO1088_019705;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=IXO1088_019705 CP040687.1 Protein Homology CDS 4039721 4040278 . - 0 ID=cds-QIE17054.1;Parent=gene-IXO1088_019705;Dbxref=NCBI_GP:QIE17054.1;Name=QIE17054.1;gbkey=CDS;gene=nusG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636269.1;locus_tag=IXO1088_019705;product=transcription termination/antitermination protein NusG;protein_id=QIE17054.1;transl_table=11 CP040687.1 Genbank gene 4040292 4040702 . - . ID=gene-IXO1088_019710;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=IXO1088_019710 CP040687.1 Protein Homology CDS 4040292 4040702 . - 0 ID=cds-QIE17055.1;Parent=gene-IXO1088_019710;Dbxref=NCBI_GP:QIE17055.1;Name=QIE17055.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636268.2;locus_tag=IXO1088_019710;product=preprotein translocase subunit SecE;protein_id=QIE17055.1;transl_table=11 CP040687.1 Genbank gene 4040752 4040827 . - . ID=gene-IXO1088_019715;Name=IXO1088_019715;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_019715 CP040687.1 tRNAscan-SE tRNA 4040752 4040827 . - . ID=rna-IXO1088_019715;Parent=gene-IXO1088_019715;anticodon=(pos:complement(4040792..4040794));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_019715;product=tRNA-Trp CP040687.1 tRNAscan-SE exon 4040752 4040827 . - . ID=exon-IXO1088_019715-1;Parent=rna-IXO1088_019715;anticodon=(pos:complement(4040792..4040794));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_019715;product=tRNA-Trp CP040687.1 Genbank gene 4040933 4042123 . - . ID=gene-IXO1088_019720;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=IXO1088_019720 CP040687.1 Protein Homology CDS 4040933 4042123 . - 0 ID=cds-QIE17056.1;Parent=gene-IXO1088_019720;Dbxref=NCBI_GP:QIE17056.1;Name=QIE17056.1;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636267.1;locus_tag=IXO1088_019720;product=elongation factor Tu;protein_id=QIE17056.1;transl_table=11 CP040687.1 Genbank gene 4042170 4042245 . - . ID=gene-IXO1088_019725;Name=IXO1088_019725;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_019725 CP040687.1 tRNAscan-SE tRNA 4042170 4042245 . - . ID=rna-IXO1088_019725;Parent=gene-IXO1088_019725;anticodon=(pos:complement(4042210..4042212));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_019725;product=tRNA-Thr CP040687.1 tRNAscan-SE exon 4042170 4042245 . - . ID=exon-IXO1088_019725-1;Parent=rna-IXO1088_019725;anticodon=(pos:complement(4042210..4042212));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_019725;product=tRNA-Thr CP040687.1 Genbank gene 4042280 4042353 . - . ID=gene-IXO1088_019730;Name=IXO1088_019730;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_019730 CP040687.1 tRNAscan-SE tRNA 4042280 4042353 . - . ID=rna-IXO1088_019730;Parent=gene-IXO1088_019730;anticodon=(pos:complement(4042319..4042321));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_019730;product=tRNA-Gly CP040687.1 tRNAscan-SE exon 4042280 4042353 . - . ID=exon-IXO1088_019730-1;Parent=rna-IXO1088_019730;anticodon=(pos:complement(4042319..4042321));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_019730;product=tRNA-Gly CP040687.1 Genbank gene 4042383 4042468 . - . ID=gene-IXO1088_019735;Name=IXO1088_019735;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_019735 CP040687.1 tRNAscan-SE tRNA 4042383 4042468 . - . ID=rna-IXO1088_019735;Parent=gene-IXO1088_019735;anticodon=(pos:complement(4042432..4042434));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_019735;product=tRNA-Tyr CP040687.1 tRNAscan-SE exon 4042383 4042468 . - . ID=exon-IXO1088_019735-1;Parent=rna-IXO1088_019735;anticodon=(pos:complement(4042432..4042434));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_019735;product=tRNA-Tyr CP040687.1 Genbank gene 4042622 4043713 . - . ID=gene-IXO1088_019740;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=IXO1088_019740 CP040687.1 Protein Homology CDS 4042622 4043713 . - 0 ID=cds-QIE17057.1;Parent=gene-IXO1088_019740;Dbxref=NCBI_GP:QIE17057.1;Name=QIE17057.1;gbkey=CDS;gene=ychF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811726.1;locus_tag=IXO1088_019740;product=redox-regulated ATPase YchF;protein_id=QIE17057.1;transl_table=11 CP040687.1 Genbank gene 4043788 4044372 . - . ID=gene-IXO1088_019745;Name=IXO1088_019745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019745 CP040687.1 Protein Homology CDS 4043788 4044372 . - 0 ID=cds-QIE17058.1;Parent=gene-IXO1088_019745;Dbxref=NCBI_GP:QIE17058.1;Name=QIE17058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968854.1;locus_tag=IXO1088_019745;product=aminoacyl-tRNA hydrolase;protein_id=QIE17058.1;transl_table=11 CP040687.1 Genbank gene 4044424 4045059 . - . ID=gene-IXO1088_019750;Name=IXO1088_019750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019750 CP040687.1 Protein Homology CDS 4044424 4045059 . - 0 ID=cds-QIE17059.1;Parent=gene-IXO1088_019750;Dbxref=NCBI_GP:QIE17059.1;Name=QIE17059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486759.1;locus_tag=IXO1088_019750;product=50S ribosomal protein L25;protein_id=QIE17059.1;transl_table=11 CP040687.1 Genbank gene 4045169 4046128 . - . ID=gene-IXO1088_019755;Name=IXO1088_019755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019755 CP040687.1 Protein Homology CDS 4045169 4046128 . - 0 ID=cds-QIE17060.1;Parent=gene-IXO1088_019755;Dbxref=NCBI_GP:QIE17060.1;Name=QIE17060.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PRK04923.1;locus_tag=IXO1088_019755;product=ribose-phosphate diphosphokinase;protein_id=QIE17060.1;transl_table=11 CP040687.1 Genbank gene 4046256 4046332 . - . ID=gene-IXO1088_019760;Name=IXO1088_019760;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_019760 CP040687.1 tRNAscan-SE tRNA 4046256 4046332 . - . ID=rna-IXO1088_019760;Parent=gene-IXO1088_019760;anticodon=(pos:complement(4046296..4046298));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_019760;product=tRNA-Gln CP040687.1 tRNAscan-SE exon 4046256 4046332 . - . ID=exon-IXO1088_019760-1;Parent=rna-IXO1088_019760;anticodon=(pos:complement(4046296..4046298));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_019760;product=tRNA-Gln CP040687.1 Genbank gene 4046336 4047223 . - . ID=gene-IXO1088_019765;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=IXO1088_019765 CP040687.1 Protein Homology CDS 4046336 4047223 . - 0 ID=cds-QIE17061.1;Parent=gene-IXO1088_019765;Dbxref=NCBI_GP:QIE17061.1;Name=QIE17061.1;gbkey=CDS;gene=ispE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346534.1;locus_tag=IXO1088_019765;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=QIE17061.1;transl_table=11 CP040687.1 Genbank gene 4047205 4047858 . - . ID=gene-IXO1088_019770;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=IXO1088_019770 CP040687.1 Protein Homology CDS 4047205 4047858 . - 0 ID=cds-QIE17062.1;Parent=gene-IXO1088_019770;Dbxref=NCBI_GP:QIE17062.1;Name=QIE17062.1;gbkey=CDS;gene=lolB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636261.1;locus_tag=IXO1088_019770;product=lipoprotein localization protein LolB;protein_id=QIE17062.1;transl_table=11 CP040687.1 Genbank gene 4047855 4049543 . - . ID=gene-IXO1088_019775;Name=IXO1088_019775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019775 CP040687.1 Protein Homology CDS 4047855 4049543 . - 0 ID=cds-QIE17063.1;Parent=gene-IXO1088_019775;Dbxref=NCBI_GP:QIE17063.1;Name=QIE17063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636260.1;locus_tag=IXO1088_019775;product=tetratricopeptide repeat protein;protein_id=QIE17063.1;transl_table=11 CP040687.1 Genbank gene 4049609 4050907 . + . ID=gene-IXO1088_019780;Name=IXO1088_019780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019780 CP040687.1 Protein Homology CDS 4049609 4050907 . + 0 ID=cds-QIE17064.1;Parent=gene-IXO1088_019780;Dbxref=NCBI_GP:QIE17064.1;Name=QIE17064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636259.1;locus_tag=IXO1088_019780;product=glutamyl-tRNA reductase;protein_id=QIE17064.1;transl_table=11 CP040687.1 Genbank gene 4050885 4051970 . + . ID=gene-IXO1088_019785;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=IXO1088_019785 CP040687.1 Protein Homology CDS 4050885 4051970 . + 0 ID=cds-QIE17065.1;Parent=gene-IXO1088_019785;Dbxref=NCBI_GP:QIE17065.1;Name=QIE17065.1;gbkey=CDS;gene=prfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300176.1;locus_tag=IXO1088_019785;product=peptide chain release factor 1;protein_id=QIE17065.1;transl_table=11 CP040687.1 Genbank gene 4051967 4053673 . + . ID=gene-IXO1088_019790;Name=IXO1088_019790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019790 CP040687.1 Protein Homology CDS 4051967 4053673 . + 0 ID=cds-QIE17066.1;Parent=gene-IXO1088_019790;Dbxref=NCBI_GP:QIE17066.1;Name=QIE17066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636257.1;locus_tag=IXO1088_019790;product=tetratricopeptide repeat protein;protein_id=QIE17066.1;transl_table=11 CP040687.1 Genbank gene 4054139 4054657 . + . ID=gene-IXO1088_019795;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=IXO1088_019795 CP040687.1 Protein Homology CDS 4054139 4054657 . + 0 ID=cds-QIE17067.1;Parent=gene-IXO1088_019795;Dbxref=NCBI_GP:QIE17067.1;Name=QIE17067.1;gbkey=CDS;gene=moaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636256.1;locus_tag=IXO1088_019795;product=molybdenum cofactor biosynthesis protein B;protein_id=QIE17067.1;transl_table=11 CP040687.1 Genbank gene 4054690 4055472 . + . ID=gene-IXO1088_019800;Name=ppk2;gbkey=Gene;gene=ppk2;gene_biotype=protein_coding;locus_tag=IXO1088_019800 CP040687.1 Protein Homology CDS 4054690 4055472 . + 0 ID=cds-QIE17068.1;Parent=gene-IXO1088_019800;Dbxref=NCBI_GP:QIE17068.1;Name=QIE17068.1;gbkey=CDS;gene=ppk2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636255.1;locus_tag=IXO1088_019800;product=polyphosphate kinase 2;protein_id=QIE17068.1;transl_table=11 CP040687.1 Genbank gene 4055454 4056683 . - . ID=gene-IXO1088_019805;Name=IXO1088_019805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019805 CP040687.1 Protein Homology CDS 4055454 4056683 . - 0 ID=cds-QIE17069.1;Parent=gene-IXO1088_019805;Dbxref=NCBI_GP:QIE17069.1;Name=QIE17069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636254.1;locus_tag=IXO1088_019805;product=hypothetical protein;protein_id=QIE17069.1;transl_table=11 CP040687.1 Genbank gene 4056769 4057035 . - . ID=gene-IXO1088_019810;Name=IXO1088_019810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019810 CP040687.1 Protein Homology CDS 4056769 4057035 . - 0 ID=cds-QIE17070.1;Parent=gene-IXO1088_019810;Dbxref=NCBI_GP:QIE17070.1;Name=QIE17070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636253.1;locus_tag=IXO1088_019810;product=acylphosphatase;protein_id=QIE17070.1;transl_table=11 CP040687.1 Genbank gene 4057035 4057637 . - . ID=gene-IXO1088_019815;Name=IXO1088_019815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019815 CP040687.1 Protein Homology CDS 4057035 4057637 . - 0 ID=cds-QIE17071.1;Parent=gene-IXO1088_019815;Dbxref=NCBI_GP:QIE17071.1;Name=QIE17071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636252.1;locus_tag=IXO1088_019815;product=TlpA family protein disulfide reductase;protein_id=QIE17071.1;transl_table=11 CP040687.1 Genbank gene 4057634 4058911 . - . ID=gene-IXO1088_019820;Name=IXO1088_019820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019820 CP040687.1 Protein Homology CDS 4057634 4058911 . - 0 ID=cds-QIE17072.1;Parent=gene-IXO1088_019820;Dbxref=NCBI_GP:QIE17072.1;Name=QIE17072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636251.1;locus_tag=IXO1088_019820;product=YihY family inner membrane protein;protein_id=QIE17072.1;transl_table=11 CP040687.1 Genbank gene 4059023 4059619 . + . ID=gene-IXO1088_019825;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=IXO1088_019825 CP040687.1 Protein Homology CDS 4059023 4059619 . + 0 ID=cds-QIE17073.1;Parent=gene-IXO1088_019825;Dbxref=NCBI_GP:QIE17073.1;Name=QIE17073.1;gbkey=CDS;gene=wrbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636250.1;locus_tag=IXO1088_019825;product=NAD(P)H:quinone oxidoreductase;protein_id=QIE17073.1;transl_table=11 CP040687.1 Genbank gene 4059616 4059963 . + . ID=gene-IXO1088_019830;Name=IXO1088_019830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019830 CP040687.1 Protein Homology CDS 4059616 4059963 . + 0 ID=cds-QIE17074.1;Parent=gene-IXO1088_019830;Dbxref=NCBI_GP:QIE17074.1;Name=QIE17074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502128.1;locus_tag=IXO1088_019830;product=DUF2069 domain-containing protein;protein_id=QIE17074.1;transl_table=11 CP040687.1 Genbank gene 4060093 4060167 . + . ID=gene-IXO1088_019835;Name=IXO1088_019835;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_019835 CP040687.1 cmsearch ncRNA 4060093 4060167 . + . ID=rna-IXO1088_019835;Parent=gene-IXO1088_019835;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_019835;product=sX9 sRNA CP040687.1 cmsearch exon 4060093 4060167 . + . ID=exon-IXO1088_019835-1;Parent=rna-IXO1088_019835;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_019835;product=sX9 sRNA CP040687.1 Genbank gene 4060172 4061392 . - . ID=gene-IXO1088_019840;Name=IXO1088_019840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019840 CP040687.1 Protein Homology CDS 4060172 4061392 . - 0 ID=cds-QIE17075.1;Parent=gene-IXO1088_019840;Dbxref=NCBI_GP:QIE17075.1;Name=QIE17075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158669.1;locus_tag=IXO1088_019840;product=xylanase;protein_id=QIE17075.1;transl_table=11 CP040687.1 Genbank gene 4061906 4062391 . + . ID=gene-IXO1088_019845;Name=IXO1088_019845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019845 CP040687.1 Protein Homology CDS 4061906 4062391 . + 0 ID=cds-QIE17076.1;Parent=gene-IXO1088_019845;Dbxref=NCBI_GP:QIE17076.1;Name=QIE17076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636247.1;locus_tag=IXO1088_019845;product=asparaginase;protein_id=QIE17076.1;transl_table=11 CP040687.1 Genbank gene 4062396 4062869 . + . ID=gene-IXO1088_019850;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=IXO1088_019850 CP040687.1 Protein Homology CDS 4062396 4062869 . + 0 ID=cds-QIE17077.1;Parent=gene-IXO1088_019850;Dbxref=NCBI_GP:QIE17077.1;Name=QIE17077.1;gbkey=CDS;gene=ybaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636246.1;locus_tag=IXO1088_019850;product=Cys-tRNA(Pro) deacylase;protein_id=QIE17077.1;transl_table=11 CP040687.1 Genbank gene 4063077 4064774 . - . ID=gene-IXO1088_019855;Name=IXO1088_019855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019855 CP040687.1 Protein Homology CDS 4063077 4064774 . - 0 ID=cds-QIE17078.1;Parent=gene-IXO1088_019855;Dbxref=NCBI_GP:QIE17078.1;Name=QIE17078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112882.1;locus_tag=IXO1088_019855;product=peptidase S8;protein_id=QIE17078.1;transl_table=11 CP040687.1 Genbank pseudogene 4065118 4066607 . - . ID=gene-IXO1088_019860;Name=IXO1088_019860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_019860;pseudo=true CP040687.1 Protein Homology CDS 4065118 4066607 . - 0 ID=cds-IXO1088_019860;Parent=gene-IXO1088_019860;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636243.1;locus_tag=IXO1088_019860;product=peptidase S8;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4066743 4068037 . - . ID=gene-IXO1088_019865;Name=IXO1088_019865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_019865;pseudo=true CP040687.1 Protein Homology CDS 4066743 4068037 . - 0 ID=cds-IXO1088_019865;Parent=gene-IXO1088_019865;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502123.1;locus_tag=IXO1088_019865;product=peptidase S8;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4068228 4069313 . - . ID=gene-IXO1088_019870;Name=IXO1088_019870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019870 CP040687.1 Protein Homology CDS 4068228 4069313 . - 0 ID=cds-QIE17079.1;Parent=gene-IXO1088_019870;Dbxref=NCBI_GP:QIE17079.1;Name=QIE17079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636241.1;locus_tag=IXO1088_019870;product=branched-chain amino acid aminotransferase;protein_id=QIE17079.1;transl_table=11 CP040687.1 Genbank gene 4069378 4069932 . - . ID=gene-IXO1088_019875;Name=sufT;gbkey=Gene;gene=sufT;gene_biotype=protein_coding;locus_tag=IXO1088_019875 CP040687.1 Protein Homology CDS 4069378 4069932 . - 0 ID=cds-QIE17080.1;Parent=gene-IXO1088_019875;Dbxref=NCBI_GP:QIE17080.1;Name=QIE17080.1;gbkey=CDS;gene=sufT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636240.1;locus_tag=IXO1088_019875;product=putative Fe-S cluster assembly protein SufT;protein_id=QIE17080.1;transl_table=11 CP040687.1 Genbank gene 4070119 4070538 . + . ID=gene-IXO1088_019880;Name=IXO1088_019880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019880 CP040687.1 Protein Homology CDS 4070119 4070538 . + 0 ID=cds-QIE17081.1;Parent=gene-IXO1088_019880;Dbxref=NCBI_GP:QIE17081.1;Name=QIE17081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636239.1;locus_tag=IXO1088_019880;product=hypothetical protein;protein_id=QIE17081.1;transl_table=11 CP040687.1 Genbank gene 4070653 4070877 . - . ID=gene-IXO1088_019885;Name=IXO1088_019885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019885 CP040687.1 Protein Homology CDS 4070653 4070877 . - 0 ID=cds-QIE17082.1;Parent=gene-IXO1088_019885;Dbxref=NCBI_GP:QIE17082.1;Name=QIE17082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304579.1;locus_tag=IXO1088_019885;product=hypothetical protein;protein_id=QIE17082.1;transl_table=11 CP040687.1 Genbank gene 4070813 4070992 . + . ID=gene-IXO1088_019890;Name=IXO1088_019890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019890 CP040687.1 Protein Homology CDS 4070813 4070992 . + 0 ID=cds-QIE17083.1;Parent=gene-IXO1088_019890;Dbxref=NCBI_GP:QIE17083.1;Name=QIE17083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913246.1;locus_tag=IXO1088_019890;product=hypothetical protein;protein_id=QIE17083.1;transl_table=11 CP040687.1 Genbank gene 4071081 4071879 . + . ID=gene-IXO1088_019895;Name=IXO1088_019895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019895 CP040687.1 Protein Homology CDS 4071081 4071352 . + 0 ID=cds-QIE17084.1;Parent=gene-IXO1088_019895;Dbxref=NCBI_GP:QIE17084.1;Name=QIE17084.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_019895;product=IS5 family transposase;protein_id=QIE17084.1;transl_table=11 CP040687.1 Protein Homology CDS 4071351 4071879 . + 1 ID=cds-QIE17084.1;Parent=gene-IXO1088_019895;Dbxref=NCBI_GP:QIE17084.1;Name=QIE17084.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_019895;product=IS5 family transposase;protein_id=QIE17084.1;transl_table=11 CP040687.1 Genbank gene 4071793 4073280 . - . ID=gene-IXO1088_019900;Name=IXO1088_019900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019900 CP040687.1 Protein Homology CDS 4071793 4073280 . - 0 ID=cds-QIE17085.1;Parent=gene-IXO1088_019900;Dbxref=NCBI_GP:QIE17085.1;Name=QIE17085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260068.1;locus_tag=IXO1088_019900;product=NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta;protein_id=QIE17085.1;transl_table=11 CP040687.1 Genbank gene 4073277 4073582 . - . ID=gene-IXO1088_019905;Name=IXO1088_019905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019905 CP040687.1 Protein Homology CDS 4073277 4073582 . - 0 ID=cds-QIE17086.1;Parent=gene-IXO1088_019905;Dbxref=NCBI_GP:QIE17086.1;Name=QIE17086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488789.1;locus_tag=IXO1088_019905;product=NAD(P) transhydrogenase subunit alpha;protein_id=QIE17086.1;transl_table=11 CP040687.1 Genbank gene 4073706 4074275 . + . ID=gene-IXO1088_019910;Name=IXO1088_019910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019910 CP040687.1 Protein Homology CDS 4073706 4074275 . + 0 ID=cds-QIE18086.1;Parent=gene-IXO1088_019910;Dbxref=NCBI_GP:QIE18086.1;Name=QIE18086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849768.1;locus_tag=IXO1088_019910;product=RNA polymerase sigma factor;protein_id=QIE18086.1;transl_table=11 CP040687.1 Genbank gene 4074272 4074622 . + . ID=gene-IXO1088_019915;Name=IXO1088_019915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019915 CP040687.1 Protein Homology CDS 4074272 4074622 . + 0 ID=cds-QIE17087.1;Parent=gene-IXO1088_019915;Dbxref=NCBI_GP:QIE17087.1;Name=QIE17087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502116.1;locus_tag=IXO1088_019915;product=hypothetical protein;protein_id=QIE17087.1;transl_table=11 CP040687.1 Genbank gene 4074628 4075113 . + . ID=gene-IXO1088_019920;Name=IXO1088_019920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019920 CP040687.1 Protein Homology CDS 4074628 4075113 . + 0 ID=cds-QIE17088.1;Parent=gene-IXO1088_019920;Dbxref=NCBI_GP:QIE17088.1;Name=QIE17088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636236.2;locus_tag=IXO1088_019920;product=DUF3106 domain-containing protein;protein_id=QIE17088.1;transl_table=11 CP040687.1 Genbank gene 4075511 4076608 . - . ID=gene-IXO1088_019925;Name=IXO1088_019925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019925 CP040687.1 Protein Homology CDS 4075511 4076608 . - 0 ID=cds-QIE17089.1;Parent=gene-IXO1088_019925;Dbxref=NCBI_GP:QIE17089.1;Name=QIE17089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409276.1;locus_tag=IXO1088_019925;product=NAD(P) transhydrogenase subunit alpha;protein_id=QIE17089.1;transl_table=11 CP040687.1 Genbank gene 4076754 4079093 . - . ID=gene-IXO1088_019930;Name=IXO1088_019930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019930 CP040687.1 Protein Homology CDS 4076754 4079093 . - 0 ID=cds-QIE17090.1;Parent=gene-IXO1088_019930;Dbxref=NCBI_GP:QIE17090.1;Name=QIE17090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636233.2;locus_tag=IXO1088_019930;product=DUF1631 domain-containing protein;protein_id=QIE17090.1;transl_table=11 CP040687.1 Genbank gene 4079461 4080036 . + . ID=gene-IXO1088_019935;Name=IXO1088_019935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019935 CP040687.1 Protein Homology CDS 4079461 4080036 . + 0 ID=cds-QIE17091.1;Parent=gene-IXO1088_019935;Dbxref=NCBI_GP:QIE17091.1;Name=QIE17091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636231.1;locus_tag=IXO1088_019935;product=nitroreductase;protein_id=QIE17091.1;transl_table=11 CP040687.1 Genbank gene 4080033 4081019 . + . ID=gene-IXO1088_019940;Name=IXO1088_019940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019940 CP040687.1 Protein Homology CDS 4080033 4081019 . + 0 ID=cds-QIE17092.1;Parent=gene-IXO1088_019940;Dbxref=NCBI_GP:QIE17092.1;Name=QIE17092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156966.1;locus_tag=IXO1088_019940;product=exodeoxyribonuclease IX;protein_id=QIE17092.1;transl_table=11 CP040687.1 Genbank gene 4081016 4081567 . + . ID=gene-IXO1088_019945;Name=IXO1088_019945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019945 CP040687.1 Protein Homology CDS 4081016 4081567 . + 0 ID=cds-QIE17093.1;Parent=gene-IXO1088_019945;Dbxref=NCBI_GP:QIE17093.1;Name=QIE17093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472542.1;locus_tag=IXO1088_019945;product=NUDIX hydrolase;protein_id=QIE17093.1;transl_table=11 CP040687.1 Genbank gene 4081548 4082345 . + . ID=gene-IXO1088_019950;Name=IXO1088_019950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019950 CP040687.1 Protein Homology CDS 4081548 4082345 . + 0 ID=cds-QIE17094.1;Parent=gene-IXO1088_019950;Dbxref=NCBI_GP:QIE17094.1;Name=QIE17094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260080.1;locus_tag=IXO1088_019950;product=N-formylglutamate amidohydrolase;protein_id=QIE17094.1;transl_table=11 CP040687.1 Genbank gene 4082546 4083487 . - . ID=gene-IXO1088_019955;Name=pip;gbkey=Gene;gene=pip;gene_biotype=protein_coding;locus_tag=IXO1088_019955 CP040687.1 Protein Homology CDS 4082546 4083487 . - 0 ID=cds-QIE17095.1;Parent=gene-IXO1088_019955;Dbxref=NCBI_GP:QIE17095.1;Name=QIE17095.1;gbkey=CDS;gene=pip;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636227.1;locus_tag=IXO1088_019955;product=prolyl aminopeptidase;protein_id=QIE17095.1;transl_table=11 CP040687.1 Genbank pseudogene 4083591 4083854 . - . ID=gene-IXO1088_019960;Name=IXO1088_019960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_019960;pseudo=true CP040687.1 Protein Homology CDS 4083591 4083854 . - 0 ID=cds-IXO1088_019960;Parent=gene-IXO1088_019960;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115590.1;locus_tag=IXO1088_019960;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4083995 4084372 . + . ID=gene-IXO1088_019965;Name=IXO1088_019965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019965 CP040687.1 Protein Homology CDS 4083995 4084372 . + 0 ID=cds-QIE18088.1;Parent=gene-IXO1088_019965;Dbxref=NCBI_GP:QIE18088.1;Name=QIE18088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300205.1;locus_tag=IXO1088_019965;product=hypothetical protein;protein_id=QIE18088.1;transl_table=11 CP040687.1 Genbank gene 4084383 4084709 . - . ID=gene-IXO1088_019970;Name=IXO1088_019970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019970 CP040687.1 Protein Homology CDS 4084383 4084709 . - 0 ID=cds-QIE18087.1;Parent=gene-IXO1088_019970;Dbxref=NCBI_GP:QIE18087.1;Name=QIE18087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260082.1;locus_tag=IXO1088_019970;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=QIE18087.1;transl_table=11 CP040687.1 Genbank gene 4084753 4085151 . - . ID=gene-IXO1088_019975;Name=IXO1088_019975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019975 CP040687.1 Protein Homology CDS 4084753 4085151 . - 0 ID=cds-QIE17096.1;Parent=gene-IXO1088_019975;Dbxref=NCBI_GP:QIE17096.1;Name=QIE17096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260083.1;locus_tag=IXO1088_019975;product=hypothetical protein;protein_id=QIE17096.1;transl_table=11 CP040687.1 Genbank gene 4085389 4086234 . - . ID=gene-IXO1088_019980;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=IXO1088_019980 CP040687.1 Protein Homology CDS 4085389 4086234 . - 0 ID=cds-QIE17097.1;Parent=gene-IXO1088_019980;Dbxref=NCBI_GP:QIE17097.1;Name=QIE17097.1;gbkey=CDS;gene=prmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636226.1;locus_tag=IXO1088_019980;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=QIE17097.1;transl_table=11 CP040687.1 Genbank gene 4086436 4086999 . + . ID=gene-IXO1088_019985;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=IXO1088_019985 CP040687.1 Protein Homology CDS 4086436 4086999 . + 0 ID=cds-QIE17098.1;Parent=gene-IXO1088_019985;Dbxref=NCBI_GP:QIE17098.1;Name=QIE17098.1;gbkey=CDS;gene=ahpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114658.1;locus_tag=IXO1088_019985;product=peroxiredoxin;protein_id=QIE17098.1;transl_table=11 CP040687.1 Genbank gene 4087195 4088787 . + . ID=gene-IXO1088_019990;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=IXO1088_019990 CP040687.1 Protein Homology CDS 4087195 4088787 . + 0 ID=cds-QIE17099.1;Parent=gene-IXO1088_019990;Dbxref=NCBI_GP:QIE17099.1;Name=QIE17099.1;gbkey=CDS;gene=ahpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636224.1;locus_tag=IXO1088_019990;product=alkyl hydroperoxide reductase subunit F;protein_id=QIE17099.1;transl_table=11 CP040687.1 Genbank gene 4088879 4089820 . + . ID=gene-IXO1088_019995;Name=IXO1088_019995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_019995 CP040687.1 Protein Homology CDS 4088879 4089820 . + 0 ID=cds-QIE17100.1;Parent=gene-IXO1088_019995;Dbxref=NCBI_GP:QIE17100.1;Name=QIE17100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636223.1;locus_tag=IXO1088_019995;product=LysR family transcriptional regulator;protein_id=QIE17100.1;transl_table=11 CP040687.1 Genbank gene 4090014 4090250 . + . ID=gene-IXO1088_020000;Name=IXO1088_020000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020000 CP040687.1 Protein Homology CDS 4090014 4090250 . + 0 ID=cds-QIE17101.1;Parent=gene-IXO1088_020000;Dbxref=NCBI_GP:QIE17101.1;Name=QIE17101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050608.1;locus_tag=IXO1088_020000;product=hypothetical protein;protein_id=QIE17101.1;transl_table=11 CP040687.1 Genbank gene 4090247 4090678 . + . ID=gene-IXO1088_020005;Name=IXO1088_020005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020005 CP040687.1 Protein Homology CDS 4090247 4090678 . + 0 ID=cds-QIE17102.1;Parent=gene-IXO1088_020005;Dbxref=NCBI_GP:QIE17102.1;Name=QIE17102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381561.1;locus_tag=IXO1088_020005;product=nucleoside diphosphate kinase regulator;protein_id=QIE17102.1;transl_table=11 CP040687.1 Genbank gene 4090741 4091709 . + . ID=gene-IXO1088_020010;Name=IXO1088_020010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020010 CP040687.1 Protein Homology CDS 4090741 4091709 . + 0 ID=cds-QIE17103.1;Parent=gene-IXO1088_020010;Dbxref=NCBI_GP:QIE17103.1;Name=QIE17103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636221.1;locus_tag=IXO1088_020010;product=transaldolase;protein_id=QIE17103.1;transl_table=11 CP040687.1 Genbank pseudogene 4092175 4092366 . + . ID=gene-IXO1088_020015;Name=IXO1088_020015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_020015;pseudo=true CP040687.1 Protein Homology CDS 4092175 4092366 . + 0 ID=cds-IXO1088_020015;Parent=gene-IXO1088_020015;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_020015;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4092373 4093338 . - . ID=gene-IXO1088_020020;Name=IXO1088_020020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020020 CP040687.1 Protein Homology CDS 4092373 4093338 . - 0 ID=cds-QIE17104.1;Parent=gene-IXO1088_020020;Dbxref=NCBI_GP:QIE17104.1;Name=QIE17104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_020020;product=IS1595-like element ISXo5 family transposase;protein_id=QIE17104.1;transl_table=11 CP040687.1 Genbank pseudogene 4093427 4094629 . + . ID=gene-IXO1088_020025;Name=IXO1088_020025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_020025;pseudo=true CP040687.1 Protein Homology CDS 4093427 4094629 . + 0 ID=cds-IXO1088_020025;Parent=gene-IXO1088_020025;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257700.1;locus_tag=IXO1088_020025;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4094771 4095349 . + . ID=gene-IXO1088_020030;Name=IXO1088_020030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020030 CP040687.1 Protein Homology CDS 4094771 4095349 . + 0 ID=cds-QIE17105.1;Parent=gene-IXO1088_020030;Dbxref=NCBI_GP:QIE17105.1;Name=QIE17105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636220.1;locus_tag=IXO1088_020030;product=glutamine amidotransferase;protein_id=QIE17105.1;transl_table=11 CP040687.1 Genbank gene 4095346 4095819 . + . ID=gene-IXO1088_020035;Name=IXO1088_020035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020035 CP040687.1 Protein Homology CDS 4095346 4095819 . + 0 ID=cds-QIE17106.1;Parent=gene-IXO1088_020035;Dbxref=NCBI_GP:QIE17106.1;Name=QIE17106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303238.1;locus_tag=IXO1088_020035;product=hypothetical protein;protein_id=QIE17106.1;transl_table=11 CP040687.1 Genbank gene 4095765 4096415 . - . ID=gene-IXO1088_020040;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=IXO1088_020040 CP040687.1 Protein Homology CDS 4095765 4096415 . - 0 ID=cds-QIE17107.1;Parent=gene-IXO1088_020040;Dbxref=NCBI_GP:QIE17107.1;Name=QIE17107.1;gbkey=CDS;gene=msrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636219.1;locus_tag=IXO1088_020040;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=QIE17107.1;transl_table=11 CP040687.1 Genbank pseudogene 4096511 4096756 . - . ID=gene-IXO1088_020045;Name=IXO1088_020045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_020045;pseudo=true CP040687.1 Protein Homology CDS 4096511 4096756 . - 0 ID=cds-IXO1088_020045;Parent=gene-IXO1088_020045;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160446.1;locus_tag=IXO1088_020045;product=SgcJ/EcaC family oxidoreductase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4096776 4097990 . - . ID=gene-IXO1088_020050;Name=IXO1088_020050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020050 CP040687.1 Protein Homology CDS 4096776 4097990 . - 0 ID=cds-QIE17108.1;Parent=gene-IXO1088_020050;Dbxref=NCBI_GP:QIE17108.1;Name=QIE17108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1088_020050;product=IS4-like element ISXo14 family transposase;protein_id=QIE17108.1;transl_table=11 CP040687.1 Genbank pseudogene 4098108 4098386 . - . ID=gene-IXO1088_020055;Name=IXO1088_020055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_020055;pseudo=true CP040687.1 Protein Homology CDS 4098108 4098386 . - 0 ID=cds-IXO1088_020055;Parent=gene-IXO1088_020055;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638539.1;locus_tag=IXO1088_020055;product=SgcJ/EcaC family oxidoreductase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4098511 4099218 . + . ID=gene-IXO1088_020060;Name=IXO1088_020060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020060 CP040687.1 Protein Homology CDS 4098511 4099218 . + 0 ID=cds-QIE17109.1;Parent=gene-IXO1088_020060;Dbxref=NCBI_GP:QIE17109.1;Name=QIE17109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994157.1;locus_tag=IXO1088_020060;product=response regulator transcription factor;protein_id=QIE17109.1;transl_table=11 CP040687.1 Genbank pseudogene 4099190 4099327 . + . ID=gene-IXO1088_020065;Name=IXO1088_020065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_020065;pseudo=true CP040687.1 Protein Homology CDS 4099190 4099327 . + 0 ID=cds-IXO1088_020065;Parent=gene-IXO1088_020065;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502093.1;locus_tag=IXO1088_020065;product=response regulator;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4099363 4100295 . + . ID=gene-IXO1088_020070;Name=IXO1088_020070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_020070;pseudo=true CP040687.1 Protein Homology CDS 4099363 4100295 . + 0 ID=cds-IXO1088_020070;Parent=gene-IXO1088_020070;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115598.1;locus_tag=IXO1088_020070;product=histidine kinase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4100338 4101136 . + . ID=gene-IXO1088_020075;Name=IXO1088_020075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020075 CP040687.1 Protein Homology CDS 4100338 4100609 . + 0 ID=cds-QIE18089.1;Parent=gene-IXO1088_020075;Dbxref=NCBI_GP:QIE18089.1;Name=QIE18089.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_020075;product=IS5 family transposase;protein_id=QIE18089.1;transl_table=11 CP040687.1 Protein Homology CDS 4100608 4101136 . + 1 ID=cds-QIE18089.1;Parent=gene-IXO1088_020075;Dbxref=NCBI_GP:QIE18089.1;Name=QIE18089.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_020075;product=IS5 family transposase;protein_id=QIE18089.1;transl_table=11 CP040687.1 Genbank gene 4101190 4102000 . + . ID=gene-IXO1088_020080;Name=IXO1088_020080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020080 CP040687.1 Protein Homology CDS 4101190 4101461 . + 0 ID=cds-QIE17110.1;Parent=gene-IXO1088_020080;Dbxref=NCBI_GP:QIE17110.1;Name=QIE17110.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_020080;product=IS5 family transposase;protein_id=QIE17110.1;transl_table=11 CP040687.1 Protein Homology CDS 4101460 4102000 . + 1 ID=cds-QIE17110.1;Parent=gene-IXO1088_020080;Dbxref=NCBI_GP:QIE17110.1;Name=QIE17110.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_020080;product=IS5 family transposase;protein_id=QIE17110.1;transl_table=11 CP040687.1 Genbank gene 4101982 4102815 . + . ID=gene-IXO1088_020085;Name=IXO1088_020085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020085 CP040687.1 Protein Homology CDS 4101982 4102815 . + 0 ID=cds-QIE18090.1;Parent=gene-IXO1088_020085;Dbxref=NCBI_GP:QIE18090.1;Name=QIE18090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260134.1;locus_tag=IXO1088_020085;product=sensor histidine kinase;protein_id=QIE18090.1;transl_table=11 CP040687.1 Genbank gene 4102812 4103276 . + . ID=gene-IXO1088_020090;Name=IXO1088_020090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020090 CP040687.1 Protein Homology CDS 4102812 4103276 . + 0 ID=cds-QIE17111.1;Parent=gene-IXO1088_020090;Dbxref=NCBI_GP:QIE17111.1;Name=QIE17111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367413.1;locus_tag=IXO1088_020090;product=response regulator;protein_id=QIE17111.1;transl_table=11 CP040687.1 Genbank gene 4103391 4103627 . - . ID=gene-IXO1088_020095;Name=IXO1088_020095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020095 CP040687.1 Protein Homology CDS 4103391 4103627 . - 0 ID=cds-QIE17112.1;Parent=gene-IXO1088_020095;Dbxref=NCBI_GP:QIE17112.1;Name=QIE17112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444257.1;locus_tag=IXO1088_020095;product=DUF2007 domain-containing protein;protein_id=QIE17112.1;transl_table=11 CP040687.1 Genbank gene 4103629 4104270 . - . ID=gene-IXO1088_020100;Name=IXO1088_020100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020100 CP040687.1 Protein Homology CDS 4103629 4104270 . - 0 ID=cds-QIE17113.1;Parent=gene-IXO1088_020100;Dbxref=NCBI_GP:QIE17113.1;Name=QIE17113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636213.1;locus_tag=IXO1088_020100;product=glutathione S-transferase family protein;protein_id=QIE17113.1;transl_table=11 CP040687.1 Genbank gene 4104325 4104531 . - . ID=gene-IXO1088_020105;Name=IXO1088_020105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020105 CP040687.1 Protein Homology CDS 4104325 4104531 . - 0 ID=cds-QIE17114.1;Parent=gene-IXO1088_020105;Dbxref=NCBI_GP:QIE17114.1;Name=QIE17114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502091.1;locus_tag=IXO1088_020105;product=cellulose biosynthesis protein;protein_id=QIE17114.1;transl_table=11 CP040687.1 Genbank gene 4104675 4106414 . + . ID=gene-IXO1088_020110;Name=IXO1088_020110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020110 CP040687.1 Protein Homology CDS 4104675 4106414 . + 0 ID=cds-QIE17115.1;Parent=gene-IXO1088_020110;Dbxref=NCBI_GP:QIE17115.1;Name=QIE17115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636212.1;locus_tag=IXO1088_020110;product=glutamine--tRNA ligase;protein_id=QIE17115.1;transl_table=11 CP040687.1 Genbank gene 4106607 4106792 . + . ID=gene-IXO1088_020115;Name=IXO1088_020115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020115 CP040687.1 Protein Homology CDS 4106607 4106792 . + 0 ID=cds-QIE17116.1;Parent=gene-IXO1088_020115;Dbxref=NCBI_GP:QIE17116.1;Name=QIE17116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502089.1;locus_tag=IXO1088_020115;product=hypothetical protein;protein_id=QIE17116.1;transl_table=11 CP040687.1 Genbank pseudogene 4106842 4107495 . - . ID=gene-IXO1088_020120;Name=IXO1088_020120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_020120;pseudo=true CP040687.1 Protein Homology CDS 4106842 4107495 . - 0 ID=cds-IXO1088_020120;Parent=gene-IXO1088_020120;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407232.1;locus_tag=IXO1088_020120;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4107504 4108267 . - . ID=gene-IXO1088_020125;Name=IXO1088_020125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020125 CP040687.1 Protein Homology CDS 4107952 4108267 . - 0 ID=cds-QIE17117.1;Parent=gene-IXO1088_020125;Dbxref=NCBI_GP:QIE17117.1;Name=QIE17117.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_020125;product=IS5 family transposase;protein_id=QIE17117.1;transl_table=11 CP040687.1 Protein Homology CDS 4107504 4107952 . - 2 ID=cds-QIE17117.1;Parent=gene-IXO1088_020125;Dbxref=NCBI_GP:QIE17117.1;Name=QIE17117.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_020125;product=IS5 family transposase;protein_id=QIE17117.1;transl_table=11 CP040687.1 Genbank gene 4108472 4108681 . - . ID=gene-IXO1088_020130;Name=IXO1088_020130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020130 CP040687.1 Protein Homology CDS 4108472 4108681 . - 0 ID=cds-QIE17118.1;Parent=gene-IXO1088_020130;Dbxref=NCBI_GP:QIE17118.1;Name=QIE17118.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13936.4;locus_tag=IXO1088_020130;product=helix-turn-helix domain-containing protein;protein_id=QIE17118.1;transl_table=11 CP040687.1 Genbank pseudogene 4108735 4108830 . + . ID=gene-IXO1088_020135;Name=IXO1088_020135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_020135;pseudo=true CP040687.1 Protein Homology CDS 4108735 4108830 . + 0 ID=cds-IXO1088_020135;Parent=gene-IXO1088_020135;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636210.1;locus_tag=IXO1088_020135;product=EamA/RhaT family transporter;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4108841 4109640 . - . ID=gene-IXO1088_020140;Name=IXO1088_020140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_020140;pseudo=true CP040687.1 Protein Homology CDS 4108841 4109640 . - 0 ID=cds-IXO1088_020140;Parent=gene-IXO1088_020140;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_020140;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4110181 4110882 . + . ID=gene-IXO1088_020145;Name=IXO1088_020145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020145 CP040687.1 Protein Homology CDS 4110181 4110882 . + 0 ID=cds-QIE18091.1;Parent=gene-IXO1088_020145;Dbxref=NCBI_GP:QIE18091.1;Name=QIE18091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260142.1;locus_tag=IXO1088_020145;product=DMT family transporter;protein_id=QIE18091.1;transl_table=11 CP040687.1 Genbank gene 4110920 4111001 . - . ID=gene-IXO1088_020150;Name=IXO1088_020150;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_020150 CP040687.1 cmsearch ncRNA 4110920 4111001 . - . ID=rna-IXO1088_020150;Parent=gene-IXO1088_020150;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_020150;product=sX9 sRNA CP040687.1 cmsearch exon 4110920 4111001 . - . ID=exon-IXO1088_020150-1;Parent=rna-IXO1088_020150;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_020150;product=sX9 sRNA CP040687.1 Genbank gene 4111238 4111648 . + . ID=gene-IXO1088_020155;Name=IXO1088_020155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020155 CP040687.1 Protein Homology CDS 4111238 4111648 . + 0 ID=cds-QIE17119.1;Parent=gene-IXO1088_020155;Dbxref=NCBI_GP:QIE17119.1;Name=QIE17119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112744.1;locus_tag=IXO1088_020155;product=hypothetical protein;protein_id=QIE17119.1;transl_table=11 CP040687.1 Genbank gene 4111648 4112208 . + . ID=gene-IXO1088_020160;Name=IXO1088_020160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020160 CP040687.1 Protein Homology CDS 4111648 4112208 . + 0 ID=cds-QIE17120.1;Parent=gene-IXO1088_020160;Dbxref=NCBI_GP:QIE17120.1;Name=QIE17120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636208.1;locus_tag=IXO1088_020160;product=nucleoside deaminase;protein_id=QIE17120.1;transl_table=11 CP040687.1 Genbank gene 4112245 4113288 . + . ID=gene-IXO1088_020165;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=IXO1088_020165 CP040687.1 Protein Homology CDS 4112245 4113288 . + 0 ID=cds-QIE17121.1;Parent=gene-IXO1088_020165;Dbxref=NCBI_GP:QIE17121.1;Name=QIE17121.1;gbkey=CDS;gene=rlmM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636207.1;locus_tag=IXO1088_020165;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=QIE17121.1;transl_table=11 CP040687.1 Genbank gene 4113617 4114726 . - . ID=gene-IXO1088_020170;Name=IXO1088_020170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020170 CP040687.1 Protein Homology CDS 4113617 4114726 . - 0 ID=cds-QIE17122.1;Parent=gene-IXO1088_020170;Dbxref=NCBI_GP:QIE17122.1;Name=QIE17122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300569.1;locus_tag=IXO1088_020170;product=Gfo/Idh/MocA family oxidoreductase;protein_id=QIE17122.1;transl_table=11 CP040687.1 Genbank gene 4114950 4115828 . + . ID=gene-IXO1088_020175;Name=IXO1088_020175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020175 CP040687.1 Protein Homology CDS 4114950 4115828 . + 0 ID=cds-QIE17123.1;Parent=gene-IXO1088_020175;Dbxref=NCBI_GP:QIE17123.1;Name=QIE17123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117289.1;locus_tag=IXO1088_020175;product=SMP-30/gluconolactonase/LRE family protein;protein_id=QIE17123.1;transl_table=11 CP040687.1 Genbank gene 4115911 4116633 . + . ID=gene-IXO1088_020180;Name=IXO1088_020180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020180 CP040687.1 Protein Homology CDS 4115911 4116633 . + 0 ID=cds-QIE17124.1;Parent=gene-IXO1088_020180;Dbxref=NCBI_GP:QIE17124.1;Name=QIE17124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449576.1;locus_tag=IXO1088_020180;product=hypothetical protein;protein_id=QIE17124.1;transl_table=11 CP040687.1 Genbank gene 4116833 4117240 . + . ID=gene-IXO1088_020185;Name=IXO1088_020185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020185 CP040687.1 Protein Homology CDS 4116833 4117240 . + 0 ID=cds-QIE17125.1;Parent=gene-IXO1088_020185;Dbxref=NCBI_GP:QIE17125.1;Name=QIE17125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157296.1;locus_tag=IXO1088_020185;product=EF-hand domain-containing protein;protein_id=QIE17125.1;transl_table=11 CP040687.1 Genbank gene 4117368 4117841 . + . ID=gene-IXO1088_020190;Name=IXO1088_020190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020190 CP040687.1 Protein Homology CDS 4117368 4117841 . + 0 ID=cds-QIE17126.1;Parent=gene-IXO1088_020190;Dbxref=NCBI_GP:QIE17126.1;Name=QIE17126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636202.1;locus_tag=IXO1088_020190;product=winged helix-turn-helix transcriptional regulator;protein_id=QIE17126.1;transl_table=11 CP040687.1 Genbank gene 4117887 4118714 . + . ID=gene-IXO1088_020195;Name=IXO1088_020195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020195 CP040687.1 Protein Homology CDS 4117887 4118714 . + 0 ID=cds-QIE17127.1;Parent=gene-IXO1088_020195;Dbxref=NCBI_GP:QIE17127.1;Name=QIE17127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572593.1;locus_tag=IXO1088_020195;product=p-hydroxycinnamoyl CoA hydratase/lyase;protein_id=QIE17127.1;transl_table=11 CP040687.1 Genbank gene 4118798 4120267 . + . ID=gene-IXO1088_020200;Name=IXO1088_020200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020200 CP040687.1 Protein Homology CDS 4118798 4120267 . + 0 ID=cds-QIE17128.1;Parent=gene-IXO1088_020200;Dbxref=NCBI_GP:QIE17128.1;Name=QIE17128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502077.1;locus_tag=IXO1088_020200;product=aldehyde dehydrogenase;protein_id=QIE17128.1;transl_table=11 CP040687.1 Genbank gene 4120470 4121948 . + . ID=gene-IXO1088_020205;Name=IXO1088_020205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020205 CP040687.1 Protein Homology CDS 4120470 4121948 . + 0 ID=cds-QIE17129.1;Parent=gene-IXO1088_020205;Dbxref=NCBI_GP:QIE17129.1;Name=QIE17129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367439.1;locus_tag=IXO1088_020205;product=AMP-binding protein;protein_id=QIE17129.1;transl_table=11 CP040687.1 Genbank gene 4122133 4123134 . - . ID=gene-IXO1088_020210;Name=IXO1088_020210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020210 CP040687.1 Protein Homology CDS 4122133 4123134 . - 0 ID=cds-QIE17130.1;Parent=gene-IXO1088_020210;Dbxref=NCBI_GP:QIE17130.1;Name=QIE17130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636197.1;locus_tag=IXO1088_020210;product=LysR family transcriptional regulator;protein_id=QIE17130.1;transl_table=11 CP040687.1 Genbank pseudogene 4123200 4123560 . - . ID=gene-IXO1088_020215;Name=IXO1088_020215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_020215;pseudo=true CP040687.1 Protein Homology CDS 4123200 4123560 . - 0 ID=cds-IXO1088_020215;Parent=gene-IXO1088_020215;Note=extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols%3B part of the bacterial aromatic compound degradation pathway%3B frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636196.1;locus_tag=IXO1088_020215;product=protocatechuate 3%2C4-dioxygenase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4123571 4124467 . - . ID=gene-IXO1088_020220;Name=IXO1088_020220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020220 CP040687.1 Protein Homology CDS 4123571 4124467 . - 0 ID=cds-QIE17131.1;Parent=gene-IXO1088_020220;Dbxref=NCBI_GP:QIE17131.1;Name=QIE17131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636195.1;locus_tag=IXO1088_020220;product=gallate dioxygenase;protein_id=QIE17131.1;transl_table=11 CP040687.1 Genbank pseudogene 4124704 4125172 . + . ID=gene-IXO1088_020225;Name=IXO1088_020225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_020225;pseudo=true CP040687.1 Protein Homology CDS 4124704 4125172 . + 0 ID=cds-IXO1088_020225;Parent=gene-IXO1088_020225;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636194.1;locus_tag=IXO1088_020225;product=GntR family transcriptional regulator;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4125163 4125558 . - . ID=gene-IXO1088_020230;Name=IXO1088_020230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_020230;pseudo=true CP040687.1 Protein Homology CDS 4125163 4125558 . - 0 ID=cds-IXO1088_020230;Parent=gene-IXO1088_020230;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011238416.1;locus_tag=IXO1088_020230;product=IS630 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4125551 4126516 . - . ID=gene-IXO1088_020235;Name=IXO1088_020235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020235 CP040687.1 Protein Homology CDS 4125551 4126516 . - 0 ID=cds-QIE17132.1;Parent=gene-IXO1088_020235;Dbxref=NCBI_GP:QIE17132.1;Name=QIE17132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_020235;product=IS1595-like element ISXo5 family transposase;protein_id=QIE17132.1;transl_table=11 CP040687.1 Genbank pseudogene 4126604 4127125 . - . ID=gene-IXO1088_020240;Name=IXO1088_020240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_020240;pseudo=true CP040687.1 Protein Homology CDS 4126604 4127125 . - 0 ID=cds-IXO1088_020240;Parent=gene-IXO1088_020240;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445209.1;locus_tag=IXO1088_020240;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4127153 4127965 . - . ID=gene-IXO1088_020245;Name=IXO1088_020245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020245 CP040687.1 Protein Homology CDS 4127153 4127965 . - 0 ID=cds-QIE17133.1;Parent=gene-IXO1088_020245;Dbxref=NCBI_GP:QIE17133.1;Name=QIE17133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409332.1;locus_tag=IXO1088_020245;product=alpha/beta hydrolase;protein_id=QIE17133.1;transl_table=11 CP040687.1 Genbank gene 4128093 4129274 . - . ID=gene-IXO1088_020250;Name=IXO1088_020250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020250 CP040687.1 Protein Homology CDS 4128093 4129274 . - 0 ID=cds-QIE17134.1;Parent=gene-IXO1088_020250;Dbxref=NCBI_GP:QIE17134.1;Name=QIE17134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007970076.1;locus_tag=IXO1088_020250;product=UbiH/UbiF family hydroxylase;protein_id=QIE17134.1;transl_table=11 CP040687.1 Genbank gene 4129271 4130479 . - . ID=gene-IXO1088_020255;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=IXO1088_020255 CP040687.1 Protein Homology CDS 4129271 4130479 . - 0 ID=cds-QIE17135.1;Parent=gene-IXO1088_020255;Dbxref=NCBI_GP:QIE17135.1;Name=QIE17135.1;gbkey=CDS;gene=ubiH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367455.1;locus_tag=IXO1088_020255;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=QIE17135.1;transl_table=11 CP040687.1 Genbank gene 4130778 4131356 . + . ID=gene-IXO1088_020260;Name=IXO1088_020260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020260 CP040687.1 Protein Homology CDS 4130778 4131356 . + 0 ID=cds-QIE17136.1;Parent=gene-IXO1088_020260;Dbxref=NCBI_GP:QIE17136.1;Name=QIE17136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159102.1;locus_tag=IXO1088_020260;product=hypothetical protein;protein_id=QIE17136.1;transl_table=11 CP040687.1 Genbank gene 4131360 4131917 . + . ID=gene-IXO1088_020265;Name=IXO1088_020265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020265 CP040687.1 Protein Homology CDS 4131360 4131917 . + 0 ID=cds-QIE17137.1;Parent=gene-IXO1088_020265;Dbxref=NCBI_GP:QIE17137.1;Name=QIE17137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636187.1;locus_tag=IXO1088_020265;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=QIE17137.1;transl_table=11 CP040687.1 Genbank gene 4131955 4132863 . + . ID=gene-IXO1088_020270;Name=IXO1088_020270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020270 CP040687.1 Protein Homology CDS 4131955 4132863 . + 0 ID=cds-QIE17138.1;Parent=gene-IXO1088_020270;Dbxref=NCBI_GP:QIE17138.1;Name=QIE17138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636186.1;locus_tag=IXO1088_020270;product=histone deacetylase family protein;protein_id=QIE17138.1;transl_table=11 CP040687.1 Genbank gene 4132991 4135432 . + . ID=gene-IXO1088_020275;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=IXO1088_020275 CP040687.1 Protein Homology CDS 4132991 4135432 . + 0 ID=cds-QIE17139.1;Parent=gene-IXO1088_020275;Dbxref=NCBI_GP:QIE17139.1;Name=QIE17139.1;gbkey=CDS;gene=lptD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636185.1;locus_tag=IXO1088_020275;product=LPS-assembly protein LptD;protein_id=QIE17139.1;transl_table=11 CP040687.1 Genbank gene 4135429 4136820 . + . ID=gene-IXO1088_020280;Name=IXO1088_020280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020280 CP040687.1 Protein Homology CDS 4135429 4136820 . + 0 ID=cds-QIE17140.1;Parent=gene-IXO1088_020280;Dbxref=NCBI_GP:QIE17140.1;Name=QIE17140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636184.1;locus_tag=IXO1088_020280;product=chaperone SurA;protein_id=QIE17140.1;transl_table=11 CP040687.1 Genbank gene 4136844 4137812 . + . ID=gene-IXO1088_020285;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=IXO1088_020285 CP040687.1 Protein Homology CDS 4136844 4137812 . + 0 ID=cds-QIE18092.1;Parent=gene-IXO1088_020285;Dbxref=NCBI_GP:QIE18092.1;Name=QIE18092.1;gbkey=CDS;gene=pdxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444235.1;locus_tag=IXO1088_020285;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=QIE18092.1;transl_table=11 CP040687.1 Genbank gene 4137936 4138011 . + . ID=gene-IXO1088_020290;Name=IXO1088_020290;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_020290 CP040687.1 cmsearch ncRNA 4137936 4138011 . + . ID=rna-IXO1088_020290;Parent=gene-IXO1088_020290;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_020290;product=sX9 sRNA CP040687.1 cmsearch exon 4137936 4138011 . + . ID=exon-IXO1088_020290-1;Parent=rna-IXO1088_020290;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_020290;product=sX9 sRNA CP040687.1 Genbank gene 4138069 4138857 . + . ID=gene-IXO1088_020295;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=IXO1088_020295 CP040687.1 Protein Homology CDS 4138069 4138857 . + 0 ID=cds-QIE17141.1;Parent=gene-IXO1088_020295;Dbxref=NCBI_GP:QIE17141.1;Name=QIE17141.1;gbkey=CDS;gene=rsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636182.1;locus_tag=IXO1088_020295;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=QIE17141.1;transl_table=11 CP040687.1 Genbank gene 4138894 4139277 . + . ID=gene-IXO1088_020300;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=IXO1088_020300 CP040687.1 Protein Homology CDS 4138894 4139277 . + 0 ID=cds-QIE17142.1;Parent=gene-IXO1088_020300;Dbxref=NCBI_GP:QIE17142.1;Name=QIE17142.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636181.1;locus_tag=IXO1088_020300;product=Co2+/Mg2+ efflux protein ApaG;protein_id=QIE17142.1;transl_table=11 CP040687.1 Genbank gene 4139306 4140262 . + . ID=gene-IXO1088_020305;Name=IXO1088_020305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020305 CP040687.1 Protein Homology CDS 4139306 4140262 . + 0 ID=cds-QIE17143.1;Parent=gene-IXO1088_020305;Dbxref=NCBI_GP:QIE17143.1;Name=QIE17143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636180.1;locus_tag=IXO1088_020305;product=symmetrical bis(5'-nucleosyl)-tetraphosphatase;protein_id=QIE17143.1;transl_table=11 CP040687.1 Genbank gene 4140316 4140810 . - . ID=gene-IXO1088_020310;Name=IXO1088_020310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020310 CP040687.1 Protein Homology CDS 4140316 4140810 . - 0 ID=cds-QIE17144.1;Parent=gene-IXO1088_020310;Dbxref=NCBI_GP:QIE17144.1;Name=QIE17144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636179.1;locus_tag=IXO1088_020310;product=dihydrofolate reductase;protein_id=QIE17144.1;transl_table=11 CP040687.1 Genbank gene 4140807 4141046 . - . ID=gene-IXO1088_020315;Name=IXO1088_020315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020315 CP040687.1 Protein Homology CDS 4140807 4141046 . - 0 ID=cds-QIE18093.1;Parent=gene-IXO1088_020315;Dbxref=NCBI_GP:QIE18093.1;Name=QIE18093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409341.1;locus_tag=IXO1088_020315;product=hypothetical protein;protein_id=QIE18093.1;transl_table=11 CP040687.1 Genbank gene 4141079 4142035 . - . ID=gene-IXO1088_020320;Name=IXO1088_020320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020320 CP040687.1 Protein Homology CDS 4141079 4142035 . - 0 ID=cds-QIE17145.1;Parent=gene-IXO1088_020320;Dbxref=NCBI_GP:QIE17145.1;Name=QIE17145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1088_020320;product=IS30-like element IS1112b family transposase;protein_id=QIE17145.1;transl_table=11 CP040687.1 Genbank gene 4142219 4143013 . - . ID=gene-IXO1088_020325;Name=IXO1088_020325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020325 CP040687.1 Protein Homology CDS 4142219 4143013 . - 0 ID=cds-QIE17146.1;Parent=gene-IXO1088_020325;Dbxref=NCBI_GP:QIE17146.1;Name=QIE17146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636178.1;locus_tag=IXO1088_020325;product=thymidylate synthase;protein_id=QIE17146.1;transl_table=11 CP040687.1 Genbank gene 4143010 4143900 . - . ID=gene-IXO1088_020330;Name=IXO1088_020330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020330 CP040687.1 Protein Homology CDS 4143010 4143900 . - 0 ID=cds-QIE17147.1;Parent=gene-IXO1088_020330;Dbxref=NCBI_GP:QIE17147.1;Name=QIE17147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636177.1;locus_tag=IXO1088_020330;product=prolipoprotein diacylglyceryl transferase;protein_id=QIE17147.1;transl_table=11 CP040687.1 Genbank gene 4143955 4144446 . - . ID=gene-IXO1088_020335;Name=IXO1088_020335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020335 CP040687.1 Protein Homology CDS 4143955 4144446 . - 0 ID=cds-QIE17148.1;Parent=gene-IXO1088_020335;Dbxref=NCBI_GP:QIE17148.1;Name=QIE17148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972126.1;locus_tag=IXO1088_020335;product=hypothetical protein;protein_id=QIE17148.1;transl_table=11 CP040687.1 Genbank gene 4144446 4145336 . - . ID=gene-IXO1088_020340;Name=IXO1088_020340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020340 CP040687.1 Protein Homology CDS 4144446 4145336 . - 0 ID=cds-QIE17149.1;Parent=gene-IXO1088_020340;Dbxref=NCBI_GP:QIE17149.1;Name=QIE17149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472553.1;locus_tag=IXO1088_020340;product=YgcG family protein;protein_id=QIE17149.1;transl_table=11 CP040687.1 Genbank gene 4145674 4146312 . - . ID=gene-IXO1088_020345;Name=IXO1088_020345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020345 CP040687.1 Protein Homology CDS 4145674 4146312 . - 0 ID=cds-QIE17150.1;Parent=gene-IXO1088_020345;Dbxref=NCBI_GP:QIE17150.1;Name=QIE17150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381647.1;locus_tag=IXO1088_020345;product=LemA family protein;protein_id=QIE17150.1;transl_table=11 CP040687.1 Genbank gene 4146408 4146788 . - . ID=gene-IXO1088_020350;Name=IXO1088_020350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020350 CP040687.1 Protein Homology CDS 4146408 4146788 . - 0 ID=cds-QIE17151.1;Parent=gene-IXO1088_020350;Dbxref=NCBI_GP:QIE17151.1;Name=QIE17151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636173.1;locus_tag=IXO1088_020350;product=diacylglycerol kinase;protein_id=QIE17151.1;transl_table=11 CP040687.1 Genbank gene 4146971 4147474 . + . ID=gene-IXO1088_020355;Name=IXO1088_020355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020355 CP040687.1 Protein Homology CDS 4146971 4147474 . + 0 ID=cds-QIE17152.1;Parent=gene-IXO1088_020355;Dbxref=NCBI_GP:QIE17152.1;Name=QIE17152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260178.1;locus_tag=IXO1088_020355;product=hypothetical protein;protein_id=QIE17152.1;transl_table=11 CP040687.1 Genbank gene 4147715 4148929 . - . ID=gene-IXO1088_020360;Name=IXO1088_020360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020360 CP040687.1 Protein Homology CDS 4147715 4148929 . - 0 ID=cds-QIE17153.1;Parent=gene-IXO1088_020360;Dbxref=NCBI_GP:QIE17153.1;Name=QIE17153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1088_020360;product=IS4 family transposase;protein_id=QIE17153.1;transl_table=11 CP040687.1 Genbank gene 4148928 4149128 . + . ID=gene-IXO1088_020365;Name=IXO1088_020365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020365 CP040687.1 Protein Homology CDS 4148928 4149128 . + 0 ID=cds-QIE17154.1;Parent=gene-IXO1088_020365;Dbxref=NCBI_GP:QIE17154.1;Name=QIE17154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015471552.1;locus_tag=IXO1088_020365;product=hypothetical protein;protein_id=QIE17154.1;transl_table=11 CP040687.1 Genbank gene 4149172 4149248 . - . ID=gene-IXO1088_020370;Name=IXO1088_020370;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_020370 CP040687.1 cmsearch ncRNA 4149172 4149248 . - . ID=rna-IXO1088_020370;Parent=gene-IXO1088_020370;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_020370;product=sX9 sRNA CP040687.1 cmsearch exon 4149172 4149248 . - . ID=exon-IXO1088_020370-1;Parent=rna-IXO1088_020370;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_020370;product=sX9 sRNA CP040687.1 Genbank gene 4149606 4150877 . - . ID=gene-IXO1088_020375;Name=IXO1088_020375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020375 CP040687.1 Protein Homology CDS 4149606 4150877 . - 0 ID=cds-QIE17155.1;Parent=gene-IXO1088_020375;Dbxref=NCBI_GP:QIE17155.1;Name=QIE17155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636171.1;locus_tag=IXO1088_020375;product=HAMP domain-containing histidine kinase;protein_id=QIE17155.1;transl_table=11 CP040687.1 Genbank gene 4151020 4151766 . - . ID=gene-IXO1088_020380;Name=IXO1088_020380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020380 CP040687.1 Protein Homology CDS 4151020 4151766 . - 0 ID=cds-QIE17156.1;Parent=gene-IXO1088_020380;Dbxref=NCBI_GP:QIE17156.1;Name=QIE17156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636170.1;locus_tag=IXO1088_020380;product=response regulator transcription factor;protein_id=QIE17156.1;transl_table=11 CP040687.1 Genbank gene 4151825 4152478 . - . ID=gene-IXO1088_020385;Name=IXO1088_020385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020385 CP040687.1 Protein Homology CDS 4151825 4152478 . - 0 ID=cds-QIE18094.1;Parent=gene-IXO1088_020385;Dbxref=NCBI_GP:QIE18094.1;Name=QIE18094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444227.1;locus_tag=IXO1088_020385;product=arylesterase;protein_id=QIE18094.1;transl_table=11 CP040687.1 Genbank gene 4152603 4153202 . + . ID=gene-IXO1088_020390;Name=IXO1088_020390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020390 CP040687.1 Protein Homology CDS 4152603 4153202 . + 0 ID=cds-QIE17157.1;Parent=gene-IXO1088_020390;Dbxref=NCBI_GP:QIE17157.1;Name=QIE17157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381667.1;locus_tag=IXO1088_020390;product=ATP-binding cassette domain-containing protein;protein_id=QIE17157.1;transl_table=11 CP040687.1 Genbank gene 4153199 4155682 . + . ID=gene-IXO1088_020395;Name=IXO1088_020395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020395 CP040687.1 Protein Homology CDS 4153199 4155682 . + 0 ID=cds-QIE17158.1;Parent=gene-IXO1088_020395;Dbxref=NCBI_GP:QIE17158.1;Name=QIE17158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636167.1;locus_tag=IXO1088_020395;product=FtsX-like permease family protein;protein_id=QIE17158.1;transl_table=11 CP040687.1 Genbank gene 4156023 4156913 . + . ID=gene-IXO1088_020400;Name=IXO1088_020400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020400 CP040687.1 Protein Homology CDS 4156023 4156913 . + 0 ID=cds-QIE18095.1;Parent=gene-IXO1088_020400;Dbxref=NCBI_GP:QIE18095.1;Name=QIE18095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636166.1;locus_tag=IXO1088_020400;product=TauD/TfdA family dioxygenase;protein_id=QIE18095.1;transl_table=11 CP040687.1 Genbank pseudogene 4156955 4158001 . + . ID=gene-IXO1088_020405;Name=IXO1088_020405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_020405;pseudo=true CP040687.1 Protein Homology CDS 4156955 4158001 . + 0 ID=cds-IXO1088_020405;Parent=gene-IXO1088_020405;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636165.1;locus_tag=IXO1088_020405;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4158005 4158839 . + . ID=gene-IXO1088_020410;Name=IXO1088_020410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_020410;pseudo=true CP040687.1 Protein Homology CDS 4158005 4158839 . + 0 ID=cds-IXO1088_020410;Parent=gene-IXO1088_020410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972117.1;locus_tag=IXO1088_020410;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4158836 4159721 . + . ID=gene-IXO1088_020415;Name=IXO1088_020415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_020415;pseudo=true CP040687.1 Protein Homology CDS 4158836 4159721 . + 0 ID=cds-IXO1088_020415;Parent=gene-IXO1088_020415;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451077.1;locus_tag=IXO1088_020415;product=ABC transporter permease subunit;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4159804 4160157 . + . ID=gene-IXO1088_020420;Name=IXO1088_020420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020420 CP040687.1 Protein Homology CDS 4159804 4160157 . + 0 ID=cds-QIE17159.1;Parent=gene-IXO1088_020420;Dbxref=NCBI_GP:QIE17159.1;Name=QIE17159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636162.1;locus_tag=IXO1088_020420;product=DMT family protein;protein_id=QIE17159.1;transl_table=11 CP040687.1 Genbank gene 4160226 4160300 . + . ID=gene-IXO1088_020425;Name=IXO1088_020425;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_020425 CP040687.1 cmsearch ncRNA 4160226 4160300 . + . ID=rna-IXO1088_020425;Parent=gene-IXO1088_020425;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_020425;product=sX9 sRNA CP040687.1 cmsearch exon 4160226 4160300 . + . ID=exon-IXO1088_020425-1;Parent=rna-IXO1088_020425;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_020425;product=sX9 sRNA CP040687.1 Genbank gene 4160320 4160396 . - . ID=gene-IXO1088_020430;Name=IXO1088_020430;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_020430 CP040687.1 cmsearch ncRNA 4160320 4160396 . - . ID=rna-IXO1088_020430;Parent=gene-IXO1088_020430;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_020430;product=sX9 sRNA CP040687.1 cmsearch exon 4160320 4160396 . - . ID=exon-IXO1088_020430-1;Parent=rna-IXO1088_020430;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_020430;product=sX9 sRNA CP040687.1 Genbank gene 4160459 4161106 . - . ID=gene-IXO1088_020435;Name=IXO1088_020435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020435 CP040687.1 Protein Homology CDS 4160459 4161106 . - 0 ID=cds-QIE17160.1;Parent=gene-IXO1088_020435;Dbxref=NCBI_GP:QIE17160.1;Name=QIE17160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409353.1;locus_tag=IXO1088_020435;product=Hemin transport protein;protein_id=QIE17160.1;transl_table=11 CP040687.1 Genbank gene 4161643 4161719 . + . ID=gene-IXO1088_020440;Name=IXO1088_020440;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_020440 CP040687.1 cmsearch ncRNA 4161643 4161719 . + . ID=rna-IXO1088_020440;Parent=gene-IXO1088_020440;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_020440;product=sX9 sRNA CP040687.1 cmsearch exon 4161643 4161719 . + . ID=exon-IXO1088_020440-1;Parent=rna-IXO1088_020440;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_020440;product=sX9 sRNA CP040687.1 Genbank gene 4161743 4161988 . - . ID=gene-IXO1088_020445;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=IXO1088_020445 CP040687.1 Protein Homology CDS 4161743 4161988 . - 0 ID=cds-QIE17161.1;Parent=gene-IXO1088_020445;Dbxref=NCBI_GP:QIE17161.1;Name=QIE17161.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636158.1;locus_tag=IXO1088_020445;product=hemin uptake protein HemP;protein_id=QIE17161.1;transl_table=11 CP040687.1 Genbank gene 4162363 4163331 . - . ID=gene-IXO1088_020450;Name=IXO1088_020450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020450 CP040687.1 Protein Homology CDS 4162363 4163331 . - 0 ID=cds-QIE17162.1;Parent=gene-IXO1088_020450;Dbxref=NCBI_GP:QIE17162.1;Name=QIE17162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811852.1;locus_tag=IXO1088_020450;product=aldo/keto reductase;protein_id=QIE17162.1;transl_table=11 CP040687.1 Genbank gene 4164054 4164254 . - . ID=gene-IXO1088_020455;Name=IXO1088_020455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020455 CP040687.1 Protein Homology CDS 4164054 4164254 . - 0 ID=cds-QIE17163.1;Parent=gene-IXO1088_020455;Dbxref=NCBI_GP:QIE17163.1;Name=QIE17163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502033.1;locus_tag=IXO1088_020455;product=hypothetical protein;protein_id=QIE17163.1;transl_table=11 CP040687.1 Genbank gene 4164530 4165828 . + . ID=gene-IXO1088_020460;Name=IXO1088_020460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020460 CP040687.1 Protein Homology CDS 4164530 4165828 . + 0 ID=cds-QIE17164.1;Parent=gene-IXO1088_020460;Dbxref=NCBI_GP:QIE17164.1;Name=QIE17164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636156.1;locus_tag=IXO1088_020460;product=NupC/NupG family nucleoside CNT transporter;protein_id=QIE17164.1;transl_table=11 CP040687.1 Genbank gene 4165920 4166870 . + . ID=gene-IXO1088_020465;Name=IXO1088_020465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020465 CP040687.1 Protein Homology CDS 4165920 4166870 . + 0 ID=cds-QIE17165.1;Parent=gene-IXO1088_020465;Dbxref=NCBI_GP:QIE17165.1;Name=QIE17165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409356.1;locus_tag=IXO1088_020465;product=ribokinase;protein_id=QIE17165.1;transl_table=11 CP040687.1 Genbank pseudogene 4167271 4167489 . - . ID=gene-IXO1088_020470;Name=IXO1088_020470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_020470;pseudo=true CP040687.1 Protein Homology CDS 4167271 4167489 . - 0 ID=cds-IXO1088_020470;Parent=gene-IXO1088_020470;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114947.1;locus_tag=IXO1088_020470;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4167461 4169644 . + . ID=gene-IXO1088_020475;Name=IXO1088_020475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020475 CP040687.1 Protein Homology CDS 4167461 4169644 . + 0 ID=cds-QIE17166.1;Parent=gene-IXO1088_020475;Dbxref=NCBI_GP:QIE17166.1;Name=QIE17166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260195.1;locus_tag=IXO1088_020475;product=carbohydrate-binding protein;protein_id=QIE17166.1;transl_table=11 CP040687.1 Genbank gene 4169754 4170752 . + . ID=gene-IXO1088_020480;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=IXO1088_020480 CP040687.1 Protein Homology CDS 4169754 4170752 . + 0 ID=cds-QIE17167.1;Parent=gene-IXO1088_020480;Dbxref=NCBI_GP:QIE17167.1;Name=QIE17167.1;gbkey=CDS;gene=dusB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636154.1;locus_tag=IXO1088_020480;product=tRNA dihydrouridine synthase DusB;protein_id=QIE17167.1;transl_table=11 CP040687.1 Genbank pseudogene 4170780 4171602 . + . ID=gene-IXO1088_020485;Name=IXO1088_020485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_020485;pseudo=true CP040687.1 Protein Homology CDS 4170780 4171602 . + 0 ID=cds-IXO1088_020485;Parent=gene-IXO1088_020485;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485197.1;locus_tag=IXO1088_020485;product=methyltransferase domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4171599 4172695 . - . ID=gene-IXO1088_020490;Name=IXO1088_020490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_020490;pseudo=true CP040687.1 Protein Homology CDS 4171599 4172695 . - 0 ID=cds-IXO1088_020490;Parent=gene-IXO1088_020490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007970626.1;locus_tag=IXO1088_020490;product=metal-dependent hydrolase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4172941 4174152 . + . ID=gene-IXO1088_020495;Name=IXO1088_020495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020495 CP040687.1 Protein Homology CDS 4172941 4174152 . + 0 ID=cds-QIE17168.1;Parent=gene-IXO1088_020495;Dbxref=NCBI_GP:QIE17168.1;Name=QIE17168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083625.1;locus_tag=IXO1088_020495;product=methionine adenosyltransferase;protein_id=QIE17168.1;transl_table=11 CP040687.1 Genbank gene 4174497 4176095 . - . ID=gene-IXO1088_020500;Name=IXO1088_020500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020500 CP040687.1 Protein Homology CDS 4174497 4176095 . - 0 ID=cds-QIE17169.1;Parent=gene-IXO1088_020500;Dbxref=NCBI_GP:QIE17169.1;Name=QIE17169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159806.1;locus_tag=IXO1088_020500;product=histidine-type phosphatase;protein_id=QIE17169.1;transl_table=11 CP040687.1 Genbank gene 4176085 4178856 . - . ID=gene-IXO1088_020505;Name=IXO1088_020505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020505 CP040687.1 Protein Homology CDS 4176085 4178856 . - 0 ID=cds-QIE17170.1;Parent=gene-IXO1088_020505;Dbxref=NCBI_GP:QIE17170.1;Name=QIE17170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005910823.1;locus_tag=IXO1088_020505;product=TonB-dependent receptor;protein_id=QIE17170.1;transl_table=11 CP040687.1 Genbank pseudogene 4178868 4179050 . + . ID=gene-IXO1088_020510;Name=IXO1088_020510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_020510;pseudo=true CP040687.1 Protein Homology CDS 4178868 4179050 . + 0 ID=cds-IXO1088_020510;Parent=gene-IXO1088_020510;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502022.1;locus_tag=IXO1088_020510;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4179330 4180304 . + . ID=gene-IXO1088_020515;Name=IXO1088_020515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020515 CP040687.1 Protein Homology CDS 4179330 4180304 . + 0 ID=cds-QIE17171.1;Parent=gene-IXO1088_020515;Dbxref=NCBI_GP:QIE17171.1;Name=QIE17171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113643.1;locus_tag=IXO1088_020515;product=hypothetical protein;protein_id=QIE17171.1;transl_table=11 CP040687.1 Genbank gene 4180368 4181003 . - . ID=gene-IXO1088_020520;Name=IXO1088_020520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020520 CP040687.1 Protein Homology CDS 4180368 4181003 . - 0 ID=cds-QIE18096.1;Parent=gene-IXO1088_020520;Dbxref=NCBI_GP:QIE18096.1;Name=QIE18096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409362.1;locus_tag=IXO1088_020520;product=TetR/AcrR family transcriptional regulator;protein_id=QIE18096.1;transl_table=11 CP040687.1 Genbank gene 4181063 4183777 . - . ID=gene-IXO1088_020525;Name=IXO1088_020525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020525 CP040687.1 Protein Homology CDS 4181063 4183777 . - 0 ID=cds-QIE17172.1;Parent=gene-IXO1088_020525;Dbxref=NCBI_GP:QIE17172.1;Name=QIE17172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636145.1;locus_tag=IXO1088_020525;product=phosphoenolpyruvate carboxylase;protein_id=QIE17172.1;transl_table=11 CP040687.1 Genbank gene 4183971 4184516 . - . ID=gene-IXO1088_020530;Name=IXO1088_020530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020530 CP040687.1 Protein Homology CDS 4183971 4184516 . - 0 ID=cds-QIE17173.1;Parent=gene-IXO1088_020530;Dbxref=NCBI_GP:QIE17173.1;Name=QIE17173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502018.1;locus_tag=IXO1088_020530;product=hypothetical protein;protein_id=QIE17173.1;transl_table=11 CP040687.1 cmsearch riboswitch 4184682 4184797 . + . ID=id-CP040687.1:4184682..4184797;Dbxref=RFAM:RF01057;Note=S-adenosyl-L-homocysteine riboswitch;bound_moiety=S-adenosyl-L-homocysteine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP040687.1 Genbank gene 4184830 4186272 . + . ID=gene-IXO1088_020535;Name=IXO1088_020535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020535 CP040687.1 Protein Homology CDS 4184830 4186272 . + 0 ID=cds-QIE17174.1;Parent=gene-IXO1088_020535;Dbxref=NCBI_GP:QIE17174.1;Name=QIE17174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636143.1;locus_tag=IXO1088_020535;product=adenosylhomocysteinase;protein_id=QIE17174.1;transl_table=11 CP040687.1 Genbank gene 4186504 4187289 . - . ID=gene-IXO1088_020540;Name=IXO1088_020540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020540 CP040687.1 Protein Homology CDS 4186504 4187289 . - 0 ID=cds-QIE17175.1;Parent=gene-IXO1088_020540;Dbxref=NCBI_GP:QIE17175.1;Name=QIE17175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160285.1;locus_tag=IXO1088_020540;product=class I SAM-dependent methyltransferase;protein_id=QIE17175.1;transl_table=11 CP040687.1 Genbank gene 4187321 4188253 . - . ID=gene-IXO1088_020545;Name=IXO1088_020545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020545 CP040687.1 Protein Homology CDS 4187321 4188253 . - 0 ID=cds-QIE17176.1;Parent=gene-IXO1088_020545;Dbxref=NCBI_GP:QIE17176.1;Name=QIE17176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155369.1;locus_tag=IXO1088_020545;product=sulfotransferase domain-containing protein;protein_id=QIE17176.1;transl_table=11 CP040687.1 Genbank gene 4188744 4189430 . - . ID=gene-IXO1088_020550;Name=IXO1088_020550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020550 CP040687.1 Protein Homology CDS 4188744 4189430 . - 0 ID=cds-QIE17177.1;Parent=gene-IXO1088_020550;Dbxref=NCBI_GP:QIE17177.1;Name=QIE17177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155370.1;locus_tag=IXO1088_020550;product=hypothetical protein;protein_id=QIE17177.1;transl_table=11 CP040687.1 Genbank gene 4189581 4190138 . - . ID=gene-IXO1088_020555;Name=IXO1088_020555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020555 CP040687.1 Protein Homology CDS 4189581 4190138 . - 0 ID=cds-QIE17178.1;Parent=gene-IXO1088_020555;Dbxref=NCBI_GP:QIE17178.1;Name=QIE17178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158826.1;locus_tag=IXO1088_020555;product=DUF3228 family protein;protein_id=QIE17178.1;transl_table=11 CP040687.1 Genbank gene 4190367 4190912 . - . ID=gene-IXO1088_020560;Name=IXO1088_020560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020560 CP040687.1 Protein Homology CDS 4190367 4190912 . - 0 ID=cds-QIE17179.1;Parent=gene-IXO1088_020560;Dbxref=NCBI_GP:QIE17179.1;Name=QIE17179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636140.1;locus_tag=IXO1088_020560;product=DUF2058 domain-containing protein;protein_id=QIE17179.1;transl_table=11 CP040687.1 Genbank pseudogene 4191082 4191717 . + . ID=gene-IXO1088_020565;Name=IXO1088_020565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_020565;pseudo=true CP040687.1 Protein Homology CDS 4191082 4191717 . + 0 ID=cds-IXO1088_020565;Parent=gene-IXO1088_020565;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005991529.1;locus_tag=IXO1088_020565;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4191731 4191807 . - . ID=gene-IXO1088_020570;Name=IXO1088_020570;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_020570 CP040687.1 cmsearch ncRNA 4191731 4191807 . - . ID=rna-IXO1088_020570;Parent=gene-IXO1088_020570;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_020570;product=sX9 sRNA CP040687.1 cmsearch exon 4191731 4191807 . - . ID=exon-IXO1088_020570-1;Parent=rna-IXO1088_020570;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_020570;product=sX9 sRNA CP040687.1 Genbank gene 4192232 4193167 . - . ID=gene-IXO1088_020575;Name=IXO1088_020575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020575 CP040687.1 Protein Homology CDS 4192232 4193167 . - 0 ID=cds-QIE18097.1;Parent=gene-IXO1088_020575;Dbxref=NCBI_GP:QIE18097.1;Name=QIE18097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636135.1;locus_tag=IXO1088_020575;product=Gfo/Idh/MocA family oxidoreductase;protein_id=QIE18097.1;transl_table=11 CP040687.1 Genbank pseudogene 4193216 4193542 . - . ID=gene-IXO1088_020580;Name=IXO1088_020580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_020580;pseudo=true CP040687.1 Protein Homology CDS 4193216 4193542 . - 0 ID=cds-IXO1088_020580;Parent=gene-IXO1088_020580;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114224.1;locus_tag=IXO1088_020580;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4193458 4193948 . + . ID=gene-IXO1088_020585;Name=IXO1088_020585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_020585;pseudo=true CP040687.1 Protein Homology CDS 4193458 4193948 . + 0 ID=cds-IXO1088_020585;Parent=gene-IXO1088_020585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502010.1;locus_tag=IXO1088_020585;product=VOC family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4194028 4194666 . - . ID=gene-IXO1088_020590;Name=IXO1088_020590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020590 CP040687.1 Protein Homology CDS 4194028 4194666 . - 0 ID=cds-QIE17180.1;Parent=gene-IXO1088_020590;Dbxref=NCBI_GP:QIE17180.1;Name=QIE17180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260212.1;locus_tag=IXO1088_020590;product=protease;protein_id=QIE17180.1;transl_table=11 CP040687.1 Genbank gene 4194855 4195832 . - . ID=gene-IXO1088_020595;Name=IXO1088_020595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020595 CP040687.1 Protein Homology CDS 4194855 4195832 . - 0 ID=cds-QIE17181.1;Parent=gene-IXO1088_020595;Dbxref=NCBI_GP:QIE17181.1;Name=QIE17181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636133.1;locus_tag=IXO1088_020595;product=NAD(P)H-quinone oxidoreductase;protein_id=QIE17181.1;transl_table=11 CP040687.1 Genbank pseudogene 4196041 4196324 . - . ID=gene-IXO1088_020600;Name=IXO1088_020600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_020600;pseudo=true CP040687.1 Protein Homology CDS 4196041 4196324 . - 0 ID=cds-IXO1088_020600;Parent=gene-IXO1088_020600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300149.1;locus_tag=IXO1088_020600;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4196323 4197705 . + . ID=gene-IXO1088_020605;Name=IXO1088_020605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_020605;pseudo=true CP040687.1 Protein Homology CDS 4196323 4197705 . + 0 ID=cds-IXO1088_020605;Parent=gene-IXO1088_020605;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346430.1;locus_tag=IXO1088_020605;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4197745 4198572 . + . ID=gene-IXO1088_020610;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=IXO1088_020610 CP040687.1 Protein Homology CDS 4197745 4198572 . + 0 ID=cds-QIE17182.1;Parent=gene-IXO1088_020610;Dbxref=NCBI_GP:QIE17182.1;Name=QIE17182.1;gbkey=CDS;gene=metF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636130.1;locus_tag=IXO1088_020610;product=methylenetetrahydrofolate reductase [NAD(P)H];protein_id=QIE17182.1;transl_table=11 CP040687.1 Genbank gene 4198755 4198831 . + . ID=gene-IXO1088_020615;Name=IXO1088_020615;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_020615 CP040687.1 cmsearch ncRNA 4198755 4198831 . + . ID=rna-IXO1088_020615;Parent=gene-IXO1088_020615;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_020615;product=sX9 sRNA CP040687.1 cmsearch exon 4198755 4198831 . + . ID=exon-IXO1088_020615-1;Parent=rna-IXO1088_020615;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_020615;product=sX9 sRNA CP040687.1 Genbank gene 4198945 4199532 . + . ID=gene-IXO1088_020620;Name=IXO1088_020620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020620 CP040687.1 Protein Homology CDS 4198945 4199532 . + 0 ID=cds-QIE17183.1;Parent=gene-IXO1088_020620;Dbxref=NCBI_GP:QIE17183.1;Name=QIE17183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260218.1;locus_tag=IXO1088_020620;product=hypothetical protein;protein_id=QIE17183.1;transl_table=11 CP040687.1 Genbank gene 4199718 4200665 . - . ID=gene-IXO1088_020625;Name=IXO1088_020625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020625 CP040687.1 Protein Homology CDS 4199718 4200665 . - 0 ID=cds-QIE17184.1;Parent=gene-IXO1088_020625;Dbxref=NCBI_GP:QIE17184.1;Name=QIE17184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005910877.1;locus_tag=IXO1088_020625;product=Nudix family hydrolase;protein_id=QIE17184.1;transl_table=11 CP040687.1 Genbank gene 4200806 4201174 . - . ID=gene-IXO1088_020630;Name=IXO1088_020630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020630 CP040687.1 Protein Homology CDS 4200806 4201174 . - 0 ID=cds-QIE17185.1;Parent=gene-IXO1088_020630;Dbxref=NCBI_GP:QIE17185.1;Name=QIE17185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636126.1;locus_tag=IXO1088_020630;product=glyoxalase;protein_id=QIE17185.1;transl_table=11 CP040687.1 Genbank gene 4201639 4204377 . - . ID=gene-IXO1088_020635;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=IXO1088_020635 CP040687.1 Protein Homology CDS 4201639 4204377 . - 0 ID=cds-QIE17186.1;Parent=gene-IXO1088_020635;Dbxref=NCBI_GP:QIE17186.1;Name=QIE17186.1;gbkey=CDS;gene=secA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636125.1;locus_tag=IXO1088_020635;product=preprotein translocase subunit SecA;protein_id=QIE17186.1;transl_table=11 CP040687.1 Genbank gene 4204534 4205475 . - . ID=gene-IXO1088_020640;Name=IXO1088_020640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020640 CP040687.1 Protein Homology CDS 4204534 4205475 . - 0 ID=cds-QIE17187.1;Parent=gene-IXO1088_020640;Dbxref=NCBI_GP:QIE17187.1;Name=QIE17187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636124.1;locus_tag=IXO1088_020640;product=M23 family metallopeptidase;protein_id=QIE17187.1;transl_table=11 CP040687.1 Genbank gene 4205476 4205922 . + . ID=gene-IXO1088_020645;Name=IXO1088_020645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020645 CP040687.1 Protein Homology CDS 4205476 4205922 . + 0 ID=cds-QIE17188.1;Parent=gene-IXO1088_020645;Dbxref=NCBI_GP:QIE17188.1;Name=QIE17188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571812.1;locus_tag=IXO1088_020645;product=DUF721 domain-containing protein;protein_id=QIE17188.1;transl_table=11 CP040687.1 Genbank gene 4206109 4207020 . - . ID=gene-IXO1088_020650;Name=IXO1088_020650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020650 CP040687.1 Protein Homology CDS 4206109 4207020 . - 0 ID=cds-QIE17189.1;Parent=gene-IXO1088_020650;Dbxref=NCBI_GP:QIE17189.1;Name=QIE17189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636122.1;locus_tag=IXO1088_020650;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=QIE17189.1;transl_table=11 CP040687.1 Genbank gene 4207257 4208501 . - . ID=gene-IXO1088_020655;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=IXO1088_020655 CP040687.1 Protein Homology CDS 4207257 4208501 . - 0 ID=cds-QIE17190.1;Parent=gene-IXO1088_020655;Dbxref=NCBI_GP:QIE17190.1;Name=QIE17190.1;gbkey=CDS;gene=ftsZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636121.1;locus_tag=IXO1088_020655;product=cell division protein FtsZ;protein_id=QIE17190.1;transl_table=11 CP040687.1 Genbank gene 4208804 4210039 . - . ID=gene-IXO1088_020660;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=IXO1088_020660 CP040687.1 Protein Homology CDS 4208804 4210039 . - 0 ID=cds-QIE17191.1;Parent=gene-IXO1088_020660;Dbxref=NCBI_GP:QIE17191.1;Name=QIE17191.1;gbkey=CDS;gene=ftsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019398559.1;locus_tag=IXO1088_020660;product=cell division protein FtsA;protein_id=QIE17191.1;transl_table=11 CP040687.1 Genbank gene 4210036 4210857 . - . ID=gene-IXO1088_020665;Name=IXO1088_020665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020665 CP040687.1 Protein Homology CDS 4210036 4210857 . - 0 ID=cds-QIE17192.1;Parent=gene-IXO1088_020665;Dbxref=NCBI_GP:QIE17192.1;Name=QIE17192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155388.1;locus_tag=IXO1088_020665;product=cell division protein FtsQ/DivIB;protein_id=QIE17192.1;transl_table=11 CP040687.1 Genbank gene 4210982 4211938 . - . ID=gene-IXO1088_020670;Name=IXO1088_020670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020670 CP040687.1 Protein Homology CDS 4210982 4211938 . - 0 ID=cds-QIE17193.1;Parent=gene-IXO1088_020670;Dbxref=NCBI_GP:QIE17193.1;Name=QIE17193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636118.1;locus_tag=IXO1088_020670;product=D-alanine--D-alanine ligase;protein_id=QIE17193.1;transl_table=11 CP040687.1 Genbank gene 4211935 4213368 . - . ID=gene-IXO1088_020675;Name=IXO1088_020675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020675 CP040687.1 Protein Homology CDS 4211935 4213368 . - 0 ID=cds-QIE17194.1;Parent=gene-IXO1088_020675;Dbxref=NCBI_GP:QIE17194.1;Name=QIE17194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636117.1;locus_tag=IXO1088_020675;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=QIE17194.1;transl_table=11 CP040687.1 Genbank gene 4213365 4214690 . - . ID=gene-IXO1088_020680;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=IXO1088_020680 CP040687.1 Protein Homology CDS 4213365 4214690 . - 0 ID=cds-QIE17195.1;Parent=gene-IXO1088_020680;Dbxref=NCBI_GP:QIE17195.1;Name=QIE17195.1;gbkey=CDS;gene=murG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260230.1;locus_tag=IXO1088_020680;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=QIE17195.1;transl_table=11 CP040687.1 Genbank gene 4214687 4216060 . - . ID=gene-IXO1088_020685;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=IXO1088_020685 CP040687.1 Protein Homology CDS 4214687 4216060 . - 0 ID=cds-QIE17196.1;Parent=gene-IXO1088_020685;Dbxref=NCBI_GP:QIE17196.1;Name=QIE17196.1;gbkey=CDS;gene=ftsW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636115.1;locus_tag=IXO1088_020685;product=putative lipid II flippase FtsW;protein_id=QIE17196.1;transl_table=11 CP040687.1 Genbank gene 4216060 4217145 . - . ID=gene-IXO1088_020690;Name=IXO1088_020690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020690 CP040687.1 Protein Homology CDS 4216060 4217145 . - 0 ID=cds-QIE17197.1;Parent=gene-IXO1088_020690;Dbxref=NCBI_GP:QIE17197.1;Name=QIE17197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452808.1;locus_tag=IXO1088_020690;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=QIE17197.1;transl_table=11 CP040687.1 Genbank gene 4217135 4218646 . - . ID=gene-IXO1088_020695;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=IXO1088_020695 CP040687.1 Protein Homology CDS 4217135 4218646 . - 0 ID=cds-QIE17198.1;Parent=gene-IXO1088_020695;Dbxref=NCBI_GP:QIE17198.1;Name=QIE17198.1;gbkey=CDS;gene=murF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636113.1;locus_tag=IXO1088_020695;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=QIE17198.1;transl_table=11 CP040687.1 Genbank gene 4218643 4220130 . - . ID=gene-IXO1088_020700;Name=IXO1088_020700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020700 CP040687.1 Protein Homology CDS 4218643 4220130 . - 0 ID=cds-QIE17199.1;Parent=gene-IXO1088_020700;Dbxref=NCBI_GP:QIE17199.1;Name=QIE17199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501990.1;locus_tag=IXO1088_020700;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=QIE17199.1;transl_table=11 CP040687.1 Genbank gene 4220127 4222004 . - . ID=gene-IXO1088_020705;Name=IXO1088_020705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020705 CP040687.1 Protein Homology CDS 4220127 4222004 . - 0 ID=cds-QIE17200.1;Parent=gene-IXO1088_020705;Dbxref=NCBI_GP:QIE17200.1;Name=QIE17200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636111.1;locus_tag=IXO1088_020705;product=penicillin-binding protein 2;protein_id=QIE17200.1;transl_table=11 CP040687.1 Genbank gene 4222135 4222398 . - . ID=gene-IXO1088_020710;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=IXO1088_020710 CP040687.1 Protein Homology CDS 4222135 4222398 . - 0 ID=cds-QIE17201.1;Parent=gene-IXO1088_020710;Dbxref=NCBI_GP:QIE17201.1;Name=QIE17201.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636110.1;locus_tag=IXO1088_020710;product=cell division protein FtsL;protein_id=QIE17201.1;transl_table=11 CP040687.1 Genbank gene 4222395 4223438 . - . ID=gene-IXO1088_020715;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=IXO1088_020715 CP040687.1 Protein Homology CDS 4222395 4223438 . - 0 ID=cds-QIE17202.1;Parent=gene-IXO1088_020715;Dbxref=NCBI_GP:QIE17202.1;Name=QIE17202.1;gbkey=CDS;gene=rsmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501987.1;locus_tag=IXO1088_020715;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=QIE17202.1;transl_table=11 CP040687.1 Genbank gene 4223454 4223909 . - . ID=gene-IXO1088_020720;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=IXO1088_020720 CP040687.1 Protein Homology CDS 4223454 4223909 . - 0 ID=cds-QIE17203.1;Parent=gene-IXO1088_020720;Dbxref=NCBI_GP:QIE17203.1;Name=QIE17203.1;gbkey=CDS;gene=mraZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636108.1;locus_tag=IXO1088_020720;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=QIE17203.1;transl_table=11 CP040687.1 Genbank gene 4224224 4224991 . + . ID=gene-IXO1088_020725;Name=IXO1088_020725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020725 CP040687.1 Protein Homology CDS 4224224 4224991 . + 0 ID=cds-QIE17204.1;Parent=gene-IXO1088_020725;Dbxref=NCBI_GP:QIE17204.1;Name=QIE17204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260239.1;locus_tag=IXO1088_020725;product=NRDE family protein;protein_id=QIE17204.1;transl_table=11 CP040687.1 Genbank pseudogene 4225040 4225261 . + . ID=gene-IXO1088_020730;Name=IXO1088_020730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_020730;pseudo=true CP040687.1 Protein Homology CDS 4225040 4225261 . + 0 ID=cds-IXO1088_020730;Parent=gene-IXO1088_020730;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452801.1;locus_tag=IXO1088_020730;product=plasmid maintenance protein CcdB;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4225372 4225721 . - . ID=gene-IXO1088_020735;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=IXO1088_020735 CP040687.1 cmsearch RNase_P_RNA 4225372 4225721 . - . ID=rna-IXO1088_020735;Parent=gene-IXO1088_020735;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_020735;product=RNase P RNA component class A CP040687.1 cmsearch exon 4225372 4225721 . - . ID=exon-IXO1088_020735-1;Parent=rna-IXO1088_020735;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_020735;product=RNase P RNA component class A CP040687.1 Genbank gene 4225868 4226689 . - . ID=gene-IXO1088_020740;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=IXO1088_020740 CP040687.1 Protein Homology CDS 4225868 4226689 . - 0 ID=cds-QIE17205.1;Parent=gene-IXO1088_020740;Dbxref=NCBI_GP:QIE17205.1;Name=QIE17205.1;gbkey=CDS;gene=rsmI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636104.1;locus_tag=IXO1088_020740;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=QIE17205.1;transl_table=11 CP040687.1 Genbank gene 4226771 4228501 . + . ID=gene-IXO1088_020745;Name=IXO1088_020745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020745 CP040687.1 Protein Homology CDS 4226771 4228501 . + 0 ID=cds-QIE17206.1;Parent=gene-IXO1088_020745;Dbxref=NCBI_GP:QIE17206.1;Name=QIE17206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636103.1;locus_tag=IXO1088_020745;product=penicillin-binding protein activator;protein_id=QIE17206.1;transl_table=11 CP040687.1 Genbank gene 4228506 4228874 . + . ID=gene-IXO1088_020750;Name=IXO1088_020750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020750 CP040687.1 Protein Homology CDS 4228506 4228874 . + 0 ID=cds-QIE17207.1;Parent=gene-IXO1088_020750;Dbxref=NCBI_GP:QIE17207.1;Name=QIE17207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636102.1;locus_tag=IXO1088_020750;product=YraN family protein;protein_id=QIE17207.1;transl_table=11 CP040687.1 Genbank gene 4228904 4229443 . + . ID=gene-IXO1088_020755;Name=IXO1088_020755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020755 CP040687.1 Protein Homology CDS 4228904 4229443 . + 0 ID=cds-QIE17208.1;Parent=gene-IXO1088_020755;Dbxref=NCBI_GP:QIE17208.1;Name=QIE17208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005910944.1;locus_tag=IXO1088_020755;product=metal-dependent hydrolase;protein_id=QIE17208.1;transl_table=11 CP040687.1 Genbank gene 4229440 4230825 . + . ID=gene-IXO1088_020760;Name=IXO1088_020760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020760 CP040687.1 Protein Homology CDS 4229440 4230825 . + 0 ID=cds-QIE17209.1;Parent=gene-IXO1088_020760;Dbxref=NCBI_GP:QIE17209.1;Name=QIE17209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115489.1;locus_tag=IXO1088_020760;product=FAD-binding protein;protein_id=QIE17209.1;transl_table=11 CP040687.1 Genbank gene 4230839 4231555 . - . ID=gene-IXO1088_020765;Name=IXO1088_020765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020765 CP040687.1 Protein Homology CDS 4230839 4231555 . - 0 ID=cds-QIE17210.1;Parent=gene-IXO1088_020765;Dbxref=NCBI_GP:QIE17210.1;Name=QIE17210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636098.1;locus_tag=IXO1088_020765;product=response regulator transcription factor;protein_id=QIE17210.1;transl_table=11 CP040687.1 Genbank gene 4231545 4234205 . - . ID=gene-IXO1088_020770;Name=IXO1088_020770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020770 CP040687.1 Protein Homology CDS 4231545 4234205 . - 0 ID=cds-QIE17211.1;Parent=gene-IXO1088_020770;Dbxref=NCBI_GP:QIE17211.1;Name=QIE17211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636097.1;locus_tag=IXO1088_020770;product=sensor histidine kinase KdpD;protein_id=QIE17211.1;transl_table=11 CP040687.1 Genbank gene 4234282 4234911 . - . ID=gene-IXO1088_020775;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=IXO1088_020775 CP040687.1 Protein Homology CDS 4234282 4234911 . - 0 ID=cds-QIE17212.1;Parent=gene-IXO1088_020775;Dbxref=NCBI_GP:QIE17212.1;Name=QIE17212.1;gbkey=CDS;gene=kdpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490511.1;locus_tag=IXO1088_020775;product=potassium-transporting ATPase subunit KdpC;protein_id=QIE17212.1;transl_table=11 CP040687.1 Genbank gene 4234952 4237000 . - . ID=gene-IXO1088_020780;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=IXO1088_020780 CP040687.1 Protein Homology CDS 4234952 4237000 . - 0 ID=cds-QIE17213.1;Parent=gene-IXO1088_020780;Dbxref=NCBI_GP:QIE17213.1;Name=QIE17213.1;gbkey=CDS;gene=kdpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260249.1;locus_tag=IXO1088_020780;product=potassium-transporting ATPase subunit KdpB;protein_id=QIE17213.1;transl_table=11 CP040687.1 Genbank gene 4237013 4238806 . - . ID=gene-IXO1088_020785;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=IXO1088_020785 CP040687.1 Protein Homology CDS 4237013 4238806 . - 0 ID=cds-QIE17214.1;Parent=gene-IXO1088_020785;Dbxref=NCBI_GP:QIE17214.1;Name=QIE17214.1;gbkey=CDS;gene=kdpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636094.1;locus_tag=IXO1088_020785;product=potassium-transporting ATPase subunit KdpA;protein_id=QIE17214.1;transl_table=11 CP040687.1 Genbank gene 4238822 4238914 . - . ID=gene-IXO1088_020790;Name=IXO1088_020790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020790 CP040687.1 Protein Homology CDS 4238822 4238914 . - 0 ID=cds-QIE17215.1;Parent=gene-IXO1088_020790;Dbxref=NCBI_GP:QIE17215.1;Name=QIE17215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636093.1;locus_tag=IXO1088_020790;product=potassium-transporting ATPase subunit F;protein_id=QIE17215.1;transl_table=11 CP040687.1 Genbank pseudogene 4239364 4240407 . - . ID=gene-IXO1088_020795;Name=IXO1088_020795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_020795;pseudo=true CP040687.1 Protein Homology CDS 4239364 4240407 . - 0 ID=cds-IXO1088_020795;Parent=gene-IXO1088_020795;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367680.1;locus_tag=IXO1088_020795;product=F-box domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4240688 4241832 . - . ID=gene-IXO1088_020800;Name=IXO1088_020800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_020800;pseudo=true CP040687.1 Protein Homology CDS 4240688 4241832 . - 0 ID=cds-IXO1088_020800;Parent=gene-IXO1088_020800;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636092.1;locus_tag=IXO1088_020800;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4241750 4241968 . + . ID=gene-IXO1088_020805;Name=IXO1088_020805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020805 CP040687.1 Protein Homology CDS 4241750 4241968 . + 0 ID=cds-QIE17216.1;Parent=gene-IXO1088_020805;Dbxref=NCBI_GP:QIE17216.1;Name=QIE17216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501972.1;locus_tag=IXO1088_020805;product=hypothetical protein;protein_id=QIE17216.1;transl_table=11 CP040687.1 Genbank gene 4242011 4242985 . - . ID=gene-IXO1088_020810;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=IXO1088_020810 CP040687.1 Protein Homology CDS 4242011 4242985 . - 0 ID=cds-QIE17217.1;Parent=gene-IXO1088_020810;Dbxref=NCBI_GP:QIE17217.1;Name=QIE17217.1;gbkey=CDS;gene=thiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636091.1;locus_tag=IXO1088_020810;product=thiamine-phosphate kinase;protein_id=QIE17217.1;transl_table=11 CP040687.1 Genbank gene 4243206 4243676 . - . ID=gene-IXO1088_020815;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=IXO1088_020815 CP040687.1 Protein Homology CDS 4243206 4243676 . - 0 ID=cds-QIE17218.1;Parent=gene-IXO1088_020815;Dbxref=NCBI_GP:QIE17218.1;Name=QIE17218.1;gbkey=CDS;gene=nusB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636090.1;locus_tag=IXO1088_020815;product=transcription antitermination factor NusB;protein_id=QIE17218.1;transl_table=11 CP040687.1 Genbank gene 4243673 4244137 . - . ID=gene-IXO1088_020820;Name=IXO1088_020820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020820 CP040687.1 Protein Homology CDS 4243673 4244137 . - 0 ID=cds-QIE17219.1;Parent=gene-IXO1088_020820;Dbxref=NCBI_GP:QIE17219.1;Name=QIE17219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636089.1;locus_tag=IXO1088_020820;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=QIE17219.1;transl_table=11 CP040687.1 Genbank gene 4244451 4245590 . - . ID=gene-IXO1088_020825;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=IXO1088_020825 CP040687.1 Protein Homology CDS 4244451 4245590 . - 0 ID=cds-QIE17220.1;Parent=gene-IXO1088_020825;Dbxref=NCBI_GP:QIE17220.1;Name=QIE17220.1;gbkey=CDS;gene=ribB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444173.1;locus_tag=IXO1088_020825;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=QIE17220.1;transl_table=11 CP040687.1 Genbank gene 4245587 4246189 . - . ID=gene-IXO1088_020830;Name=IXO1088_020830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020830 CP040687.1 Protein Homology CDS 4245587 4246189 . - 0 ID=cds-QIE17221.1;Parent=gene-IXO1088_020830;Dbxref=NCBI_GP:QIE17221.1;Name=QIE17221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636087.1;locus_tag=IXO1088_020830;product=riboflavin synthase;protein_id=QIE17221.1;transl_table=11 CP040687.1 cmsearch riboswitch 4246357 4246532 . - . ID=id-CP040687.1:4246357..4246532;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP040687.1 Genbank gene 4246750 4247373 . + . ID=gene-IXO1088_020835;Name=IXO1088_020835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020835 CP040687.1 Protein Homology CDS 4246750 4247373 . + 0 ID=cds-QIE17222.1;Parent=gene-IXO1088_020835;Dbxref=NCBI_GP:QIE17222.1;Name=QIE17222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636086.1;locus_tag=IXO1088_020835;product=hypothetical protein;protein_id=QIE17222.1;transl_table=11 CP040687.1 Genbank gene 4247429 4248538 . - . ID=gene-IXO1088_020840;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=IXO1088_020840 CP040687.1 Protein Homology CDS 4247429 4248538 . - 0 ID=cds-QIE17223.1;Parent=gene-IXO1088_020840;Dbxref=NCBI_GP:QIE17223.1;Name=QIE17223.1;gbkey=CDS;gene=ribD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501964.1;locus_tag=IXO1088_020840;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=QIE17223.1;transl_table=11 CP040687.1 Genbank gene 4248535 4249020 . - . ID=gene-IXO1088_020845;Name=IXO1088_020845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020845 CP040687.1 Protein Homology CDS 4248535 4249020 . - 0 ID=cds-QIE17224.1;Parent=gene-IXO1088_020845;Dbxref=NCBI_GP:QIE17224.1;Name=QIE17224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112785.1;locus_tag=IXO1088_020845;product=GNAT family N-acetyltransferase;protein_id=QIE17224.1;transl_table=11 CP040687.1 Genbank gene 4249017 4249541 . - . ID=gene-IXO1088_020850;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=IXO1088_020850 CP040687.1 Protein Homology CDS 4249017 4249541 . - 0 ID=cds-QIE17225.1;Parent=gene-IXO1088_020850;Dbxref=NCBI_GP:QIE17225.1;Name=QIE17225.1;gbkey=CDS;gene=nrdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636083.1;locus_tag=IXO1088_020850;product=transcriptional repressor NrdR;protein_id=QIE17225.1;transl_table=11 CP040687.1 Genbank gene 4249541 4250056 . - . ID=gene-IXO1088_020855;Name=IXO1088_020855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020855 CP040687.1 Protein Homology CDS 4249541 4250056 . - 0 ID=cds-QIE17226.1;Parent=gene-IXO1088_020855;Dbxref=NCBI_GP:QIE17226.1;Name=QIE17226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501960.1;locus_tag=IXO1088_020855;product=hypothetical protein;protein_id=QIE17226.1;transl_table=11 CP040687.1 Genbank gene 4250070 4251323 . - . ID=gene-IXO1088_020860;Name=IXO1088_020860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020860 CP040687.1 Protein Homology CDS 4250070 4251323 . - 0 ID=cds-QIE17227.1;Parent=gene-IXO1088_020860;Dbxref=NCBI_GP:QIE17227.1;Name=QIE17227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_636082.1;locus_tag=IXO1088_020860;product=serine hydroxymethyltransferase;protein_id=QIE17227.1;transl_table=11 CP040687.1 Genbank gene 4251509 4253878 . - . ID=gene-IXO1088_020865;Name=IXO1088_020865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020865 CP040687.1 Protein Homology CDS 4251509 4253878 . - 0 ID=cds-QIE17228.1;Parent=gene-IXO1088_020865;Dbxref=NCBI_GP:QIE17228.1;Name=QIE17228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117272.1;locus_tag=IXO1088_020865;product=TonB-dependent receptor;protein_id=QIE17228.1;transl_table=11 CP040687.1 Genbank gene 4254156 4254425 . + . ID=gene-IXO1088_020870;Name=IXO1088_020870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020870 CP040687.1 Protein Homology CDS 4254156 4254425 . + 0 ID=cds-QIE18098.1;Parent=gene-IXO1088_020870;Dbxref=NCBI_GP:QIE18098.1;Name=QIE18098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304691.1;locus_tag=IXO1088_020870;product=hypothetical protein;protein_id=QIE18098.1;transl_table=11 CP040687.1 Genbank gene 4254550 4255071 . - . ID=gene-IXO1088_020875;Name=IXO1088_020875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020875 CP040687.1 Protein Homology CDS 4254550 4255071 . - 0 ID=cds-QIE17229.1;Parent=gene-IXO1088_020875;Dbxref=NCBI_GP:QIE17229.1;Name=QIE17229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156712.1;locus_tag=IXO1088_020875;product=RcnB family protein;protein_id=QIE17229.1;transl_table=11 CP040687.1 Genbank gene 4255298 4256959 . + . ID=gene-IXO1088_020880;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=IXO1088_020880 CP040687.1 Protein Homology CDS 4255298 4256959 . + 0 ID=cds-QIE17230.1;Parent=gene-IXO1088_020880;Dbxref=NCBI_GP:QIE17230.1;Name=QIE17230.1;gbkey=CDS;gene=ettA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346396.1;locus_tag=IXO1088_020880;product=energy-dependent translational throttle protein EttA;protein_id=QIE17230.1;transl_table=11 CP040687.1 Genbank gene 4257134 4257478 . + . ID=gene-IXO1088_020885;Name=IXO1088_020885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020885 CP040687.1 Protein Homology CDS 4257134 4257478 . + 0 ID=cds-QIE17231.1;Parent=gene-IXO1088_020885;Dbxref=NCBI_GP:QIE17231.1;Name=QIE17231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638729.1;locus_tag=IXO1088_020885;product=hypothetical protein;protein_id=QIE17231.1;transl_table=11 CP040687.1 Genbank gene 4257475 4257807 . - . ID=gene-IXO1088_020890;Name=IXO1088_020890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020890 CP040687.1 Protein Homology CDS 4257475 4257807 . - 0 ID=cds-QIE17232.1;Parent=gene-IXO1088_020890;Dbxref=NCBI_GP:QIE17232.1;Name=QIE17232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409398.1;locus_tag=IXO1088_020890;product=DUF4386 domain-containing protein;protein_id=QIE17232.1;transl_table=11 CP040687.1 Genbank gene 4257965 4258192 . - . ID=gene-IXO1088_020895;Name=IXO1088_020895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020895 CP040687.1 Protein Homology CDS 4257965 4258192 . - 0 ID=cds-QIE17233.1;Parent=gene-IXO1088_020895;Dbxref=NCBI_GP:QIE17233.1;Name=QIE17233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501951.1;locus_tag=IXO1088_020895;product=DUF4386 family protein;protein_id=QIE17233.1;transl_table=11 CP040687.1 Genbank gene 4258322 4259152 . - . ID=gene-IXO1088_020900;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=IXO1088_020900 CP040687.1 Protein Homology CDS 4258322 4259152 . - 0 ID=cds-QIE17234.1;Parent=gene-IXO1088_020900;Dbxref=NCBI_GP:QIE17234.1;Name=QIE17234.1;gbkey=CDS;gene=fghA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638733.1;locus_tag=IXO1088_020900;product=S-formylglutathione hydrolase;protein_id=QIE17234.1;transl_table=11 CP040687.1 Genbank pseudogene 4259212 4259785 . - . ID=gene-IXO1088_020905;Name=gfa;gbkey=Gene;gene=gfa;gene_biotype=pseudogene;locus_tag=IXO1088_020905;pseudo=true CP040687.1 Protein Homology CDS 4259212 4259785 . - 0 ID=cds-IXO1088_020905;Parent=gene-IXO1088_020905;Note=frameshifted;gbkey=CDS;gene=gfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638734.1;locus_tag=IXO1088_020905;product=S-(hydroxymethyl)glutathione synthase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4259854 4260963 . - . ID=gene-IXO1088_020910;Name=IXO1088_020910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020910 CP040687.1 Protein Homology CDS 4259854 4260963 . - 0 ID=cds-QIE17235.1;Parent=gene-IXO1088_020910;Dbxref=NCBI_GP:QIE17235.1;Name=QIE17235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638735.1;locus_tag=IXO1088_020910;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=QIE17235.1;transl_table=11 CP040687.1 Genbank gene 4261028 4261303 . - . ID=gene-IXO1088_020915;Name=IXO1088_020915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020915 CP040687.1 Protein Homology CDS 4261028 4261303 . - 0 ID=cds-QIE17236.1;Parent=gene-IXO1088_020915;Dbxref=NCBI_GP:QIE17236.1;Name=QIE17236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638736.1;locus_tag=IXO1088_020915;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=QIE17236.1;transl_table=11 CP040687.1 Genbank gene 4261633 4261995 . - . ID=gene-IXO1088_020920;Name=IXO1088_020920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020920 CP040687.1 Protein Homology CDS 4261633 4261995 . - 0 ID=cds-QIE17237.1;Parent=gene-IXO1088_020920;Dbxref=NCBI_GP:QIE17237.1;Name=QIE17237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920935.1;locus_tag=IXO1088_020920;product=hypothetical protein;protein_id=QIE17237.1;transl_table=11 CP040687.1 Genbank gene 4262425 4263525 . - . ID=gene-IXO1088_020925;Name=IXO1088_020925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020925 CP040687.1 Protein Homology CDS 4262425 4263525 . - 0 ID=cds-QIE17238.1;Parent=gene-IXO1088_020925;Dbxref=NCBI_GP:QIE17238.1;Name=QIE17238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112264.1;locus_tag=IXO1088_020925;product=glycosyltransferase;protein_id=QIE17238.1;transl_table=11 CP040687.1 Genbank gene 4263664 4264383 . + . ID=gene-IXO1088_020930;Name=IXO1088_020930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020930 CP040687.1 Protein Homology CDS 4263664 4264383 . + 0 ID=cds-QIE17239.1;Parent=gene-IXO1088_020930;Dbxref=NCBI_GP:QIE17239.1;Name=QIE17239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638740.1;locus_tag=IXO1088_020930;product=response regulator transcription factor;protein_id=QIE17239.1;transl_table=11 CP040687.1 Genbank gene 4264380 4265879 . + . ID=gene-IXO1088_020935;Name=IXO1088_020935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020935 CP040687.1 Protein Homology CDS 4264380 4265879 . + 0 ID=cds-QIE17240.1;Parent=gene-IXO1088_020935;Dbxref=NCBI_GP:QIE17240.1;Name=QIE17240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365576.1;locus_tag=IXO1088_020935;product=HAMP domain-containing histidine kinase;protein_id=QIE17240.1;transl_table=11 CP040687.1 Genbank gene 4265912 4266838 . - . ID=gene-IXO1088_020940;Name=IXO1088_020940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020940 CP040687.1 Protein Homology CDS 4265912 4266838 . - 0 ID=cds-QIE17241.1;Parent=gene-IXO1088_020940;Dbxref=NCBI_GP:QIE17241.1;Name=QIE17241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118219.1;locus_tag=IXO1088_020940;product=hypothetical protein;protein_id=QIE17241.1;transl_table=11 CP040687.1 Genbank gene 4266838 4267404 . - . ID=gene-IXO1088_020945;Name=IXO1088_020945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020945 CP040687.1 Protein Homology CDS 4266838 4267404 . - 0 ID=cds-QIE17242.1;Parent=gene-IXO1088_020945;Dbxref=NCBI_GP:QIE17242.1;Name=QIE17242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009606591.1;locus_tag=IXO1088_020945;product=hypothetical protein;protein_id=QIE17242.1;transl_table=11 CP040687.1 Genbank gene 4267806 4268291 . + . ID=gene-IXO1088_020950;Name=IXO1088_020950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020950 CP040687.1 Protein Homology CDS 4267806 4268291 . + 0 ID=cds-QIE17243.1;Parent=gene-IXO1088_020950;Dbxref=NCBI_GP:QIE17243.1;Name=QIE17243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377824.1;locus_tag=IXO1088_020950;product=hypothetical protein;protein_id=QIE17243.1;transl_table=11 CP040687.1 Genbank pseudogene 4268354 4269121 . - . ID=gene-IXO1088_020955;Name=IXO1088_020955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_020955;pseudo=true CP040687.1 Protein Homology CDS 4268354 4269121 . - 0 ID=cds-IXO1088_020955;Parent=gene-IXO1088_020955;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003477658.1;locus_tag=IXO1088_020955;product=glutamate--cysteine ligase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4269207 4270814 . - . ID=gene-IXO1088_020960;Name=IXO1088_020960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020960 CP040687.1 Protein Homology CDS 4269207 4270814 . - 0 ID=cds-QIE18099.1;Parent=gene-IXO1088_020960;Dbxref=NCBI_GP:QIE18099.1;Name=QIE18099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_020960;product=IS701 family transposase;protein_id=QIE18099.1;transl_table=11 CP040687.1 Genbank gene 4270976 4271239 . + . ID=gene-IXO1088_020965;Name=IXO1088_020965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020965 CP040687.1 Protein Homology CDS 4270976 4271239 . + 0 ID=cds-QIE17244.1;Parent=gene-IXO1088_020965;Dbxref=NCBI_GP:QIE17244.1;Name=QIE17244.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00672.23;locus_tag=IXO1088_020965;product=HAMP domain-containing protein;protein_id=QIE17244.1;transl_table=11 CP040687.1 Genbank gene 4271244 4271882 . + . ID=gene-IXO1088_020970;Name=IXO1088_020970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020970 CP040687.1 Protein Homology CDS 4271244 4271882 . + 0 ID=cds-QIE17245.1;Parent=gene-IXO1088_020970;Dbxref=NCBI_GP:QIE17245.1;Name=QIE17245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444153.1;locus_tag=IXO1088_020970;product=histidine kinase;protein_id=QIE17245.1;transl_table=11 CP040687.1 Genbank gene 4272069 4273433 . - . ID=gene-IXO1088_020975;Name=IXO1088_020975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020975 CP040687.1 Protein Homology CDS 4272069 4273433 . - 0 ID=cds-QIE17246.1;Parent=gene-IXO1088_020975;Dbxref=NCBI_GP:QIE17246.1;Name=QIE17246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638742.1;locus_tag=IXO1088_020975;product=glutamate--cysteine ligase;protein_id=QIE17246.1;transl_table=11 CP040687.1 Genbank gene 4273649 4274344 . + . ID=gene-IXO1088_020980;Name=IXO1088_020980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020980 CP040687.1 Protein Homology CDS 4273649 4274344 . + 0 ID=cds-QIE17247.1;Parent=gene-IXO1088_020980;Dbxref=NCBI_GP:QIE17247.1;Name=QIE17247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171583.1;locus_tag=IXO1088_020980;product=VIT family protein;protein_id=QIE17247.1;transl_table=11 CP040687.1 Genbank gene 4274439 4275062 . - . ID=gene-IXO1088_020985;Name=IXO1088_020985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020985 CP040687.1 Protein Homology CDS 4274439 4275062 . - 0 ID=cds-QIE17248.1;Parent=gene-IXO1088_020985;Dbxref=NCBI_GP:QIE17248.1;Name=QIE17248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156699.1;locus_tag=IXO1088_020985;product=YihA family ribosome biogenesis GTP-binding protein;protein_id=QIE17248.1;transl_table=11 CP040687.1 Genbank gene 4275264 4276004 . + . ID=gene-IXO1088_020990;Name=IXO1088_020990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020990 CP040687.1 Protein Homology CDS 4275264 4276004 . + 0 ID=cds-QIE18100.1;Parent=gene-IXO1088_020990;Dbxref=NCBI_GP:QIE18100.1;Name=QIE18100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638744.1;locus_tag=IXO1088_020990;product=cytochrome c4;protein_id=QIE18100.1;transl_table=11 CP040687.1 Genbank gene 4276098 4276748 . + . ID=gene-IXO1088_020995;Name=IXO1088_020995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_020995 CP040687.1 Protein Homology CDS 4276098 4276748 . + 0 ID=cds-QIE17249.1;Parent=gene-IXO1088_020995;Dbxref=NCBI_GP:QIE17249.1;Name=QIE17249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638745.1;locus_tag=IXO1088_020995;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=QIE17249.1;transl_table=11 CP040687.1 Genbank gene 4276840 4277655 . + . ID=gene-IXO1088_021000;Name=IXO1088_021000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021000 CP040687.1 Protein Homology CDS 4276840 4277655 . + 0 ID=cds-QIE17250.1;Parent=gene-IXO1088_021000;Dbxref=NCBI_GP:QIE17250.1;Name=QIE17250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638746.1;locus_tag=IXO1088_021000;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=QIE17250.1;transl_table=11 CP040687.1 Genbank gene 4277705 4278442 . + . ID=gene-IXO1088_021005;Name=IXO1088_021005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021005 CP040687.1 Protein Homology CDS 4277705 4278442 . + 0 ID=cds-QIE18101.1;Parent=gene-IXO1088_021005;Dbxref=NCBI_GP:QIE18101.1;Name=QIE18101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638747.1;locus_tag=IXO1088_021005;product=EEP domain-containing protein;protein_id=QIE18101.1;transl_table=11 CP040687.1 Genbank gene 4278541 4279497 . + . ID=gene-IXO1088_021010;Name=IXO1088_021010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021010 CP040687.1 Protein Homology CDS 4278541 4279497 . + 0 ID=cds-QIE17251.1;Parent=gene-IXO1088_021010;Dbxref=NCBI_GP:QIE17251.1;Name=QIE17251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1088_021010;product=IS30-like element IS1112b family transposase;protein_id=QIE17251.1;transl_table=11 CP040687.1 Genbank pseudogene 4279506 4279961 . + . ID=gene-IXO1088_021015;Name=IXO1088_021015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021015;pseudo=true CP040687.1 Protein Homology CDS 4279506 4279961 . + 0 ID=cds-IXO1088_021015;Parent=gene-IXO1088_021015;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005730262.1;locus_tag=IXO1088_021015;product=N-acetyltransferase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4280057 4280323 . + . ID=gene-IXO1088_021020;Name=IXO1088_021020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021020 CP040687.1 Protein Homology CDS 4280057 4280323 . + 0 ID=cds-QIE17252.1;Parent=gene-IXO1088_021020;Dbxref=NCBI_GP:QIE17252.1;Name=QIE17252.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01527.18;locus_tag=IXO1088_021020;product=transposase;protein_id=QIE17252.1;transl_table=11 CP040687.1 Genbank pseudogene 4280501 4281247 . + . ID=gene-IXO1088_021025;Name=IXO1088_021025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021025;pseudo=true CP040687.1 Protein Homology CDS 4280501 4281247 . + 0 ID=cds-IXO1088_021025;Parent=gene-IXO1088_021025;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_021025;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4281255 4282053 . - . ID=gene-IXO1088_021030;Name=IXO1088_021030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021030 CP040687.1 Protein Homology CDS 4281782 4282053 . - 0 ID=cds-QIE17253.1;Parent=gene-IXO1088_021030;Dbxref=NCBI_GP:QIE17253.1;Name=QIE17253.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_021030;product=IS5 family transposase;protein_id=QIE17253.1;transl_table=11 CP040687.1 Protein Homology CDS 4281255 4281783 . - 1 ID=cds-QIE17253.1;Parent=gene-IXO1088_021030;Dbxref=NCBI_GP:QIE17253.1;Name=QIE17253.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_021030;product=IS5 family transposase;protein_id=QIE17253.1;transl_table=11 CP040687.1 Genbank gene 4282107 4282905 . - . ID=gene-IXO1088_021035;Name=IXO1088_021035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021035 CP040687.1 Protein Homology CDS 4282634 4282905 . - 0 ID=cds-QIE17254.1;Parent=gene-IXO1088_021035;Dbxref=NCBI_GP:QIE17254.1;Name=QIE17254.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_021035;product=IS5 family transposase;protein_id=QIE17254.1;transl_table=11 CP040687.1 Protein Homology CDS 4282107 4282635 . - 1 ID=cds-QIE17254.1;Parent=gene-IXO1088_021035;Dbxref=NCBI_GP:QIE17254.1;Name=QIE17254.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_021035;product=IS5 family transposase;protein_id=QIE17254.1;transl_table=11 CP040687.1 Genbank pseudogene 4282949 4283524 . + . ID=gene-IXO1088_021040;Name=IXO1088_021040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021040;pseudo=true CP040687.1 Protein Homology CDS 4282949 4283524 . + 0 ID=cds-IXO1088_021040;Parent=gene-IXO1088_021040;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_021040;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4283727 4284419 . + . ID=gene-IXO1088_021045;Name=IXO1088_021045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021045;pseudo=true CP040687.1 Protein Homology CDS 4283727 4284419 . + 0 ID=cds-IXO1088_021045;Parent=gene-IXO1088_021045;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1088_021045;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4284552 4285784 . + . ID=gene-IXO1088_021050;Name=IXO1088_021050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021050 CP040687.1 Protein Homology CDS 4284552 4285784 . + 0 ID=cds-QIE17255.1;Parent=gene-IXO1088_021050;Dbxref=NCBI_GP:QIE17255.1;Name=QIE17255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159082.1;locus_tag=IXO1088_021050;product=multifunctional CCA addition/repair protein;protein_id=QIE17255.1;transl_table=11 CP040687.1 Genbank pseudogene 4285824 4286609 . - . ID=gene-IXO1088_021055;Name=IXO1088_021055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021055;pseudo=true CP040687.1 Protein Homology CDS 4285824 4286609 . - 0 ID=cds-IXO1088_021055;Parent=gene-IXO1088_021055;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259790.1;locus_tag=IXO1088_021055;product=IS1595 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4286617 4287045 . - . ID=gene-IXO1088_021060;Name=IXO1088_021060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021060;pseudo=true CP040687.1 Protein Homology CDS 4286617 4287045 . - 0 ID=cds-IXO1088_021060;Parent=gene-IXO1088_021060;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_021060;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4287050 4288006 . - . ID=gene-IXO1088_021065;Name=IXO1088_021065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021065 CP040687.1 Protein Homology CDS 4287050 4288006 . - 0 ID=cds-QIE17256.1;Parent=gene-IXO1088_021065;Dbxref=NCBI_GP:QIE17256.1;Name=QIE17256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1088_021065;product=IS30-like element IS1112b family transposase;protein_id=QIE17256.1;transl_table=11 CP040687.1 Genbank pseudogene 4288116 4288439 . - . ID=gene-IXO1088_021070;Name=IXO1088_021070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021070;pseudo=true CP040687.1 Protein Homology CDS 4288116 4288439 . - 0 ID=cds-IXO1088_021070;Parent=gene-IXO1088_021070;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_021070;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4288494 4288661 . - . ID=gene-IXO1088_021075;Name=IXO1088_021075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021075;pseudo=true CP040687.1 Protein Homology CDS 4288494 4288661 . - 0 ID=cds-IXO1088_021075;Parent=gene-IXO1088_021075;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037261.1;locus_tag=IXO1088_021075;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4288890 4288965 . - . ID=gene-IXO1088_021080;Name=IXO1088_021080;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_021080 CP040687.1 cmsearch ncRNA 4288890 4288965 . - . ID=rna-IXO1088_021080;Parent=gene-IXO1088_021080;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_021080;product=sX9 sRNA CP040687.1 cmsearch exon 4288890 4288965 . - . ID=exon-IXO1088_021080-1;Parent=rna-IXO1088_021080;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_021080;product=sX9 sRNA CP040687.1 Genbank pseudogene 4289069 4289389 . - . ID=gene-IXO1088_021085;Name=IXO1088_021085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021085;pseudo=true CP040687.1 Protein Homology CDS 4289069 4289389 . - 0 ID=cds-IXO1088_021085;Parent=gene-IXO1088_021085;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638754.1;locus_tag=IXO1088_021085;product=TonB-dependent receptor;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4289409 4289564 . + . ID=gene-IXO1088_021090;Name=IXO1088_021090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021090;pseudo=true CP040687.1 Protein Homology CDS 4289409 4289564 . + 0 ID=cds-IXO1088_021090;Parent=gene-IXO1088_021090;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258951.1;locus_tag=IXO1088_021090;product=pectate lyase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4289564 4291812 . - . ID=gene-IXO1088_021095;Name=IXO1088_021095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021095;pseudo=true CP040687.1 Protein Homology CDS 4289564 4291812 . - 0 ID=cds-IXO1088_021095;Parent=gene-IXO1088_021095;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482623.1;locus_tag=IXO1088_021095;product=TonB-dependent receptor;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4292448 4293413 . + . ID=gene-IXO1088_021100;Name=IXO1088_021100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021100 CP040687.1 Protein Homology CDS 4292448 4293413 . + 0 ID=cds-QIE17257.1;Parent=gene-IXO1088_021100;Dbxref=NCBI_GP:QIE17257.1;Name=QIE17257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_021100;product=IS1595-like element ISXo5 family transposase;protein_id=QIE17257.1;transl_table=11 CP040687.1 Genbank gene 4293875 4294105 . - . ID=gene-IXO1088_021105;Name=IXO1088_021105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021105 CP040687.1 Protein Homology CDS 4293875 4294105 . - 0 ID=cds-QIE17258.1;Parent=gene-IXO1088_021105;Dbxref=NCBI_GP:QIE17258.1;Name=QIE17258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301884.1;locus_tag=IXO1088_021105;product=hypothetical protein;protein_id=QIE17258.1;transl_table=11 CP040687.1 Genbank pseudogene 4294301 4294378 . - . ID=gene-IXO1088_021110;Name=IXO1088_021110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021110;pseudo=true CP040687.1 Protein Homology CDS 4294301 4294378 . - 0 ID=cds-IXO1088_021110;Parent=gene-IXO1088_021110;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376297.1;locus_tag=IXO1088_021110;product=TonB-dependent receptor;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4294731 4296773 . + . ID=gene-IXO1088_021115;Name=pgaA;gbkey=Gene;gene=pgaA;gene_biotype=protein_coding;locus_tag=IXO1088_021115 CP040687.1 Protein Homology CDS 4294731 4296773 . + 0 ID=cds-QIE18102.1;Parent=gene-IXO1088_021115;Dbxref=NCBI_GP:QIE18102.1;Name=QIE18102.1;gbkey=CDS;gene=pgaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444133.1;locus_tag=IXO1088_021115;product=poly-beta-1%2C6 N-acetyl-D-glucosamine export porin PgaA;protein_id=QIE18102.1;transl_table=11 CP040687.1 Genbank gene 4296775 4298673 . + . ID=gene-IXO1088_021120;Name=pgaB;gbkey=Gene;gene=pgaB;gene_biotype=protein_coding;locus_tag=IXO1088_021120 CP040687.1 Protein Homology CDS 4296775 4298673 . + 0 ID=cds-QIE17259.1;Parent=gene-IXO1088_021120;Dbxref=NCBI_GP:QIE17259.1;Name=QIE17259.1;gbkey=CDS;gene=pgaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301885.1;locus_tag=IXO1088_021120;product=poly-beta-1%2C6-N-acetyl-D-glucosamine N-deacetylase PgaB;protein_id=QIE17259.1;transl_table=11 CP040687.1 Genbank gene 4298675 4299928 . + . ID=gene-IXO1088_021125;Name=pgaC;gbkey=Gene;gene=pgaC;gene_biotype=protein_coding;locus_tag=IXO1088_021125 CP040687.1 Protein Homology CDS 4298675 4299928 . + 0 ID=cds-QIE17260.1;Parent=gene-IXO1088_021125;Dbxref=NCBI_GP:QIE17260.1;Name=QIE17260.1;gbkey=CDS;gene=pgaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304732.1;locus_tag=IXO1088_021125;product=poly-beta-1%2C6 N-acetyl-D-glucosamine synthase;protein_id=QIE17260.1;transl_table=11 CP040687.1 Genbank gene 4299925 4300530 . + . ID=gene-IXO1088_021130;Name=pgaD;gbkey=Gene;gene=pgaD;gene_biotype=protein_coding;locus_tag=IXO1088_021130 CP040687.1 Protein Homology CDS 4299925 4300530 . + 0 ID=cds-QIE17261.1;Parent=gene-IXO1088_021130;Dbxref=NCBI_GP:QIE17261.1;Name=QIE17261.1;gbkey=CDS;gene=pgaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501922.1;locus_tag=IXO1088_021130;product=poly-beta-1%2C6-N-acetyl-D-glucosamine biosynthesis protein PgaD;protein_id=QIE17261.1;transl_table=11 CP040687.1 Genbank gene 4300950 4302104 . - . ID=gene-IXO1088_021135;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=IXO1088_021135 CP040687.1 Protein Homology CDS 4300950 4302104 . - 0 ID=cds-QIE17262.1;Parent=gene-IXO1088_021135;Dbxref=NCBI_GP:QIE17262.1;Name=QIE17262.1;gbkey=CDS;gene=nagA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638756.1;locus_tag=IXO1088_021135;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=QIE17262.1;transl_table=11 CP040687.1 Genbank gene 4302107 4303135 . - . ID=gene-IXO1088_021140;Name=IXO1088_021140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021140 CP040687.1 Protein Homology CDS 4302107 4303135 . - 0 ID=cds-QIE17263.1;Parent=gene-IXO1088_021140;Dbxref=NCBI_GP:QIE17263.1;Name=QIE17263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638757.2;locus_tag=IXO1088_021140;product=SIS domain-containing protein;protein_id=QIE17263.1;transl_table=11 CP040687.1 Genbank gene 4303142 4304209 . - . ID=gene-IXO1088_021145;Name=IXO1088_021145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021145 CP040687.1 Protein Homology CDS 4303142 4304209 . - 0 ID=cds-QIE17264.1;Parent=gene-IXO1088_021145;Dbxref=NCBI_GP:QIE17264.1;Name=QIE17264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301891.1;locus_tag=IXO1088_021145;product=LacI family DNA-binding transcriptional regulator;protein_id=QIE17264.1;transl_table=11 CP040687.1 Genbank gene 4304250 4305527 . - . ID=gene-IXO1088_021150;Name=IXO1088_021150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021150 CP040687.1 Protein Homology CDS 4304250 4305527 . - 0 ID=cds-QIE17265.1;Parent=gene-IXO1088_021150;Dbxref=NCBI_GP:QIE17265.1;Name=QIE17265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638759.1;locus_tag=IXO1088_021150;product=sugar MFS transporter;protein_id=QIE17265.1;transl_table=11 CP040687.1 Genbank gene 4305572 4306339 . - . ID=gene-IXO1088_021155;Name=IXO1088_021155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021155 CP040687.1 Protein Homology CDS 4305572 4306339 . - 0 ID=cds-QIE17266.1;Parent=gene-IXO1088_021155;Dbxref=NCBI_GP:QIE17266.1;Name=QIE17266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301893.1;locus_tag=IXO1088_021155;product=GntR family transcriptional regulator;protein_id=QIE17266.1;transl_table=11 CP040687.1 Genbank gene 4306554 4307720 . - . ID=gene-IXO1088_021160;Name=IXO1088_021160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021160 CP040687.1 Protein Homology CDS 4306554 4307720 . - 0 ID=cds-QIE17267.1;Parent=gene-IXO1088_021160;Dbxref=NCBI_GP:QIE17267.1;Name=QIE17267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113051.1;locus_tag=IXO1088_021160;product=DUF1624 domain-containing protein;protein_id=QIE17267.1;transl_table=11 CP040687.1 Genbank pseudogene 4307866 4310279 . - . ID=gene-IXO1088_021165;Name=IXO1088_021165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021165;pseudo=true CP040687.1 Protein Homology CDS 4307866 4310279 . - 0 ID=cds-IXO1088_021165;Parent=gene-IXO1088_021165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368195.1;locus_tag=IXO1088_021165;product=alpha-N-acetylglucosaminidase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4310276 4313173 . - . ID=gene-IXO1088_021170;Name=IXO1088_021170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021170 CP040687.1 Protein Homology CDS 4310276 4313173 . - 0 ID=cds-QIE17268.1;Parent=gene-IXO1088_021170;Dbxref=NCBI_GP:QIE17268.1;Name=QIE17268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451298.1;locus_tag=IXO1088_021170;product=glycoside hydrolase family 2 protein;protein_id=QIE17268.1;transl_table=11 CP040687.1 Genbank gene 4313324 4316014 . - . ID=gene-IXO1088_021175;Name=IXO1088_021175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021175 CP040687.1 Protein Homology CDS 4313324 4316014 . - 0 ID=cds-QIE17269.1;Parent=gene-IXO1088_021175;Dbxref=NCBI_GP:QIE17269.1;Name=QIE17269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050492.1;locus_tag=IXO1088_021175;product=TonB-dependent receptor;protein_id=QIE17269.1;transl_table=11 CP040687.1 Genbank pseudogene 4316296 4316406 . - . ID=gene-IXO1088_021180;Name=IXO1088_021180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021180;pseudo=true CP040687.1 Protein Homology CDS 4316296 4316406 . - 0 ID=cds-IXO1088_021180;Parent=gene-IXO1088_021180;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=IXO1088_021180;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4316458 4316724 . + . ID=gene-IXO1088_021185;Name=IXO1088_021185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021185;pseudo=true CP040687.1 Protein Homology CDS 4316458 4316724 . + 0 ID=cds-IXO1088_021185;Parent=gene-IXO1088_021185;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612183.1;locus_tag=IXO1088_021185;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4316746 4317981 . - . ID=gene-IXO1088_021190;Name=IXO1088_021190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021190 CP040687.1 Protein Homology CDS 4316746 4317981 . - 0 ID=cds-QIE17270.1;Parent=gene-IXO1088_021190;Dbxref=NCBI_GP:QIE17270.1;Name=QIE17270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1088_021190;product=ISL3-like element ISXoo13 family transposase;protein_id=QIE17270.1;transl_table=11 CP040687.1 Genbank pseudogene 4318044 4318892 . + . ID=gene-IXO1088_021195;Name=IXO1088_021195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021195;pseudo=true CP040687.1 Protein Homology CDS 4318044 4318892 . + 0 ID=cds-IXO1088_021195;Parent=gene-IXO1088_021195;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612183.1;locus_tag=IXO1088_021195;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4318924 4319213 . + . ID=gene-IXO1088_021200;Name=IXO1088_021200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021200;pseudo=true CP040687.1 Protein Homology CDS 4318924 4319213 . + 0 ID=cds-IXO1088_021200;Parent=gene-IXO1088_021200;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=IXO1088_021200;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4319241 4319429 . - . ID=gene-IXO1088_021205;Name=IXO1088_021205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021205;pseudo=true CP040687.1 Protein Homology CDS 4319241 4319429 . - 0 ID=cds-IXO1088_021205;Parent=gene-IXO1088_021205;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968563.1;locus_tag=IXO1088_021205;product=VanZ family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4319417 4320601 . - . ID=gene-IXO1088_021210;Name=IXO1088_021210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021210 CP040687.1 Protein Homology CDS 4319417 4320601 . - 0 ID=cds-QIE17271.1;Parent=gene-IXO1088_021210;Dbxref=NCBI_GP:QIE17271.1;Name=QIE17271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638777.2;locus_tag=IXO1088_021210;product=class I SAM-dependent methyltransferase;protein_id=QIE17271.1;transl_table=11 CP040687.1 Genbank gene 4320669 4321406 . + . ID=gene-IXO1088_021215;Name=IXO1088_021215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021215 CP040687.1 Protein Homology CDS 4320669 4321406 . + 0 ID=cds-QIE17272.1;Parent=gene-IXO1088_021215;Dbxref=NCBI_GP:QIE17272.1;Name=QIE17272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638778.1;locus_tag=IXO1088_021215;product=pteridine reductase;protein_id=QIE17272.1;transl_table=11 CP040687.1 Genbank gene 4321575 4322090 . - . ID=gene-IXO1088_021220;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=IXO1088_021220 CP040687.1 Protein Homology CDS 4321575 4322090 . - 0 ID=cds-QIE17273.1;Parent=gene-IXO1088_021220;Dbxref=NCBI_GP:QIE17273.1;Name=QIE17273.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482682.1;locus_tag=IXO1088_021220;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=QIE17273.1;transl_table=11 CP040687.1 Genbank gene 4322182 4323684 . - . ID=gene-IXO1088_021225;Name=IXO1088_021225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021225 CP040687.1 Protein Homology CDS 4322182 4323684 . - 0 ID=cds-QIE17274.1;Parent=gene-IXO1088_021225;Dbxref=NCBI_GP:QIE17274.1;Name=QIE17274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638780.1;locus_tag=IXO1088_021225;product=response regulator;protein_id=QIE17274.1;transl_table=11 CP040687.1 Genbank gene 4323688 4324128 . - . ID=gene-IXO1088_021230;Name=IXO1088_021230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021230 CP040687.1 Protein Homology CDS 4323688 4324128 . - 0 ID=cds-QIE17275.1;Parent=gene-IXO1088_021230;Dbxref=NCBI_GP:QIE17275.1;Name=QIE17275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638781.1;locus_tag=IXO1088_021230;product=response regulator;protein_id=QIE17275.1;transl_table=11 CP040687.1 Genbank gene 4324125 4325936 . - . ID=gene-IXO1088_021235;Name=IXO1088_021235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021235 CP040687.1 Protein Homology CDS 4324125 4325936 . - 0 ID=cds-QIE17276.1;Parent=gene-IXO1088_021235;Dbxref=NCBI_GP:QIE17276.1;Name=QIE17276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368210.1;locus_tag=IXO1088_021235;product=PAS domain S-box protein;protein_id=QIE17276.1;transl_table=11 CP040687.1 Genbank gene 4326222 4326584 . - . ID=gene-IXO1088_021240;Name=IXO1088_021240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021240 CP040687.1 Protein Homology CDS 4326222 4326584 . - 0 ID=cds-QIE18103.1;Parent=gene-IXO1088_021240;Dbxref=NCBI_GP:QIE18103.1;Name=QIE18103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409444.1;locus_tag=IXO1088_021240;product=BON domain-containing protein;protein_id=QIE18103.1;transl_table=11 CP040687.1 Genbank gene 4326744 4327796 . + . ID=gene-IXO1088_021245;Name=IXO1088_021245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021245 CP040687.1 Protein Homology CDS 4326744 4327796 . + 0 ID=cds-QIE17277.1;Parent=gene-IXO1088_021245;Dbxref=NCBI_GP:QIE17277.1;Name=QIE17277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368214.1;locus_tag=IXO1088_021245;product=oxidoreductase;protein_id=QIE17277.1;transl_table=11 CP040687.1 Genbank gene 4328135 4329076 . - . ID=gene-IXO1088_021250;Name=gnd;gbkey=Gene;gene=gnd;gene_biotype=protein_coding;locus_tag=IXO1088_021250 CP040687.1 Protein Homology CDS 4328135 4329076 . - 0 ID=cds-QIE17278.1;Parent=gene-IXO1088_021250;Dbxref=NCBI_GP:QIE17278.1;Name=QIE17278.1;gbkey=CDS;gene=gnd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638785.1;locus_tag=IXO1088_021250;product=decarboxylating 6-phosphogluconate dehydrogenase;protein_id=QIE17278.1;transl_table=11 CP040687.1 Genbank gene 4329097 4330434 . - . ID=gene-IXO1088_021255;Name=IXO1088_021255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021255 CP040687.1 Protein Homology CDS 4329097 4330434 . - 0 ID=cds-QIE17279.1;Parent=gene-IXO1088_021255;Dbxref=NCBI_GP:QIE17279.1;Name=QIE17279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376259.1;locus_tag=IXO1088_021255;product=hypothetical protein;protein_id=QIE17279.1;transl_table=11 CP040687.1 Genbank gene 4330606 4330986 . - . ID=gene-IXO1088_021260;Name=IXO1088_021260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021260 CP040687.1 Protein Homology CDS 4330606 4330986 . - 0 ID=cds-QIE17280.1;Parent=gene-IXO1088_021260;Dbxref=NCBI_GP:QIE17280.1;Name=QIE17280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638787.1;locus_tag=IXO1088_021260;product=glycine zipper 2TM domain-containing protein;protein_id=QIE17280.1;transl_table=11 CP040687.1 Genbank gene 4331111 4331872 . - . ID=gene-IXO1088_021265;Name=IXO1088_021265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021265 CP040687.1 Protein Homology CDS 4331111 4331872 . - 0 ID=cds-QIE17281.1;Parent=gene-IXO1088_021265;Dbxref=NCBI_GP:QIE17281.1;Name=QIE17281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118975.1;locus_tag=IXO1088_021265;product=DUF2242 domain-containing protein;protein_id=QIE17281.1;transl_table=11 CP040687.1 Genbank pseudogene 4331947 4333001 . - . ID=gene-IXO1088_021270;Name=IXO1088_021270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021270;pseudo=true CP040687.1 Protein Homology CDS 4331947 4333001 . - 0 ID=cds-IXO1088_021270;Parent=gene-IXO1088_021270;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089336.1;locus_tag=IXO1088_021270;product=site-specific DNA-methyltransferase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4332994 4334107 . - . ID=gene-IXO1088_021275;Name=IXO1088_021275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021275;pseudo=true CP040687.1 Protein Homology CDS 4332994 4334107 . - 0 ID=cds-IXO1088_021275;Parent=gene-IXO1088_021275;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115450.1;locus_tag=IXO1088_021275;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4334130 4335533 . - . ID=gene-IXO1088_021280;Name=IXO1088_021280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021280 CP040687.1 Protein Homology CDS 4334130 4335533 . - 0 ID=cds-QIE17282.1;Parent=gene-IXO1088_021280;Dbxref=NCBI_GP:QIE17282.1;Name=QIE17282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005990339.1;locus_tag=IXO1088_021280;product=nicotinate phosphoribosyltransferase;protein_id=QIE17282.1;transl_table=11 CP040687.1 Genbank gene 4335656 4336711 . - . ID=gene-IXO1088_021285;Name=IXO1088_021285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021285 CP040687.1 Protein Homology CDS 4335656 4336711 . - 0 ID=cds-QIE17283.1;Parent=gene-IXO1088_021285;Dbxref=NCBI_GP:QIE17283.1;Name=QIE17283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638792.1;locus_tag=IXO1088_021285;product=bifunctional nicotinamide-nucleotide adenylyltransferase/Nudix hydroxylase;protein_id=QIE17283.1;transl_table=11 CP040687.1 Genbank gene 4336884 4337738 . + . ID=gene-IXO1088_021290;Name=IXO1088_021290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021290 CP040687.1 Protein Homology CDS 4336884 4337738 . + 0 ID=cds-QIE18104.1;Parent=gene-IXO1088_021290;Dbxref=NCBI_GP:QIE18104.1;Name=QIE18104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016900841.1;locus_tag=IXO1088_021290;product=endonuclease/exonuclease/phosphatase family protein;protein_id=QIE18104.1;transl_table=11 CP040687.1 Genbank gene 4338030 4340213 . - . ID=gene-IXO1088_021295;Name=IXO1088_021295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021295 CP040687.1 Protein Homology CDS 4338030 4340213 . - 0 ID=cds-QIE17284.1;Parent=gene-IXO1088_021295;Dbxref=NCBI_GP:QIE17284.1;Name=QIE17284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638796.1;locus_tag=IXO1088_021295;product=PDZ domain-containing protein;protein_id=QIE17284.1;transl_table=11 CP040687.1 Genbank gene 4340613 4341626 . - . ID=gene-IXO1088_021300;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=IXO1088_021300 CP040687.1 Protein Homology CDS 4340613 4341626 . - 0 ID=cds-QIE17285.1;Parent=gene-IXO1088_021300;Dbxref=NCBI_GP:QIE17285.1;Name=QIE17285.1;gbkey=CDS;gene=lipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638797.1;locus_tag=IXO1088_021300;product=lipoyl synthase;protein_id=QIE17285.1;transl_table=11 CP040687.1 Genbank gene 4341641 4342339 . - . ID=gene-IXO1088_021305;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=IXO1088_021305 CP040687.1 Protein Homology CDS 4341641 4342339 . - 0 ID=cds-QIE17286.1;Parent=gene-IXO1088_021305;Dbxref=NCBI_GP:QIE17286.1;Name=QIE17286.1;gbkey=CDS;gene=lipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638798.1;locus_tag=IXO1088_021305;product=lipoyl(octanoyl) transferase LipB;protein_id=QIE17286.1;transl_table=11 CP040687.1 Genbank gene 4342327 4342605 . - . ID=gene-IXO1088_021310;Name=IXO1088_021310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021310 CP040687.1 Protein Homology CDS 4342327 4342605 . - 0 ID=cds-QIE17287.1;Parent=gene-IXO1088_021310;Dbxref=NCBI_GP:QIE17287.1;Name=QIE17287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638799.1;locus_tag=IXO1088_021310;product=DUF493 family protein;protein_id=QIE17287.1;transl_table=11 CP040687.1 Genbank pseudogene 4342732 4343382 . - . ID=gene-IXO1088_021315;Name=IXO1088_021315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021315;pseudo=true CP040687.1 Protein Homology CDS 4342732 4343382 . - 0 ID=cds-IXO1088_021315;Parent=gene-IXO1088_021315;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638800.2;locus_tag=IXO1088_021315;product=peptidoglycan-binding protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4343368 4343457 . + . ID=gene-IXO1088_021320;Name=IXO1088_021320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021320;pseudo=true CP040687.1 Protein Homology CDS 4343368 4343457 . + 0 ID=cds-IXO1088_021320;Parent=gene-IXO1088_021320;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638801.1;locus_tag=IXO1088_021320;product=lipid A deacylase LpxR family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4343672 4344877 . - . ID=gene-IXO1088_021325;Name=IXO1088_021325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021325 CP040687.1 Protein Homology CDS 4343672 4344877 . - 0 ID=cds-QIE17288.1;Parent=gene-IXO1088_021325;Dbxref=NCBI_GP:QIE17288.1;Name=QIE17288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638802.1;locus_tag=IXO1088_021325;product=D-alanyl-D-alanine carboxypeptidase;protein_id=QIE17288.1;transl_table=11 CP040687.1 Genbank gene 4345380 4346795 . - . ID=gene-IXO1088_021330;Name=IXO1088_021330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021330 CP040687.1 Protein Homology CDS 4345380 4346795 . - 0 ID=cds-QIE17289.1;Parent=gene-IXO1088_021330;Dbxref=NCBI_GP:QIE17289.1;Name=QIE17289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155355.1;locus_tag=IXO1088_021330;product=septal ring lytic transglycosylase RlpA family protein;protein_id=QIE17289.1;transl_table=11 CP040687.1 Genbank gene 4346792 4347931 . - . ID=gene-IXO1088_021335;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=IXO1088_021335 CP040687.1 Protein Homology CDS 4346792 4347931 . - 0 ID=cds-QIE17290.1;Parent=gene-IXO1088_021335;Dbxref=NCBI_GP:QIE17290.1;Name=QIE17290.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638804.1;locus_tag=IXO1088_021335;product=lytic murein transglycosylase B;protein_id=QIE17290.1;transl_table=11 CP040687.1 Genbank pseudogene 4348200 4348670 . - . ID=gene-IXO1088_021340;Name=IXO1088_021340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021340;pseudo=true CP040687.1 Protein Homology CDS 4348200 4348670 . - 0 ID=cds-IXO1088_021340;Parent=gene-IXO1088_021340;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346338.1;locus_tag=IXO1088_021340;product=polygalacturonase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4348778 4349275 . - . ID=gene-IXO1088_021345;Name=IXO1088_021345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021345;pseudo=true CP040687.1 Protein Homology CDS 4348778 4349275 . - 0 ID=cds-IXO1088_021345;Parent=gene-IXO1088_021345;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444101.1;locus_tag=IXO1088_021345;product=type VI secretion system tip protein VgrG;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4349361 4349947 . - . ID=gene-IXO1088_021350;Name=IXO1088_021350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021350;pseudo=true CP040687.1 Protein Homology CDS 4349361 4349947 . - 0 ID=cds-IXO1088_021350;Parent=gene-IXO1088_021350;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1088_021350;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4350037 4351155 . - . ID=gene-IXO1088_021355;Name=rodA;gbkey=Gene;gene=rodA;gene_biotype=protein_coding;locus_tag=IXO1088_021355 CP040687.1 Protein Homology CDS 4350037 4351155 . - 0 ID=cds-QIE17291.1;Parent=gene-IXO1088_021355;Dbxref=NCBI_GP:QIE17291.1;Name=QIE17291.1;gbkey=CDS;gene=rodA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638812.1;locus_tag=IXO1088_021355;product=rod shape-determining protein RodA;protein_id=QIE17291.1;transl_table=11 CP040687.1 Genbank gene 4351152 4353212 . - . ID=gene-IXO1088_021360;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=IXO1088_021360 CP040687.1 Protein Homology CDS 4351152 4353212 . - 0 ID=cds-QIE17292.1;Parent=gene-IXO1088_021360;Dbxref=NCBI_GP:QIE17292.1;Name=QIE17292.1;gbkey=CDS;gene=mrdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303045.1;locus_tag=IXO1088_021360;product=penicillin-binding protein 2;protein_id=QIE17292.1;transl_table=11 CP040687.1 Genbank gene 4353216 4353701 . - . ID=gene-IXO1088_021365;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=IXO1088_021365 CP040687.1 Protein Homology CDS 4353216 4353701 . - 0 ID=cds-QIE17293.1;Parent=gene-IXO1088_021365;Dbxref=NCBI_GP:QIE17293.1;Name=QIE17293.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638814.1;locus_tag=IXO1088_021365;product=rod shape-determining protein MreD;protein_id=QIE17293.1;transl_table=11 CP040687.1 Genbank gene 4353698 4355044 . - . ID=gene-IXO1088_021370;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=IXO1088_021370 CP040687.1 Protein Homology CDS 4353698 4355044 . - 0 ID=cds-QIE17294.1;Parent=gene-IXO1088_021370;Dbxref=NCBI_GP:QIE17294.1;Name=QIE17294.1;gbkey=CDS;gene=mreC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638815.1;locus_tag=IXO1088_021370;product=rod shape-determining protein MreC;protein_id=QIE17294.1;transl_table=11 CP040687.1 Genbank gene 4355217 4356263 . - . ID=gene-IXO1088_021375;Name=IXO1088_021375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021375 CP040687.1 Protein Homology CDS 4355217 4356263 . - 0 ID=cds-QIE17295.1;Parent=gene-IXO1088_021375;Dbxref=NCBI_GP:QIE17295.1;Name=QIE17295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010343692.1;locus_tag=IXO1088_021375;product=rod shape-determining protein;protein_id=QIE17295.1;transl_table=11 CP040687.1 Genbank gene 4356539 4357471 . + . ID=gene-IXO1088_021380;Name=IXO1088_021380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021380 CP040687.1 Protein Homology CDS 4356539 4357471 . + 0 ID=cds-QIE17296.1;Parent=gene-IXO1088_021380;Dbxref=NCBI_GP:QIE17296.1;Name=QIE17296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038567.1;locus_tag=IXO1088_021380;product=carbohydrate kinase family protein;protein_id=QIE17296.1;transl_table=11 CP040687.1 Genbank pseudogene 4357583 4358195 . - . ID=gene-IXO1088_021385;Name=IXO1088_021385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021385;pseudo=true CP040687.1 Protein Homology CDS 4357583 4358195 . - 0 ID=cds-IXO1088_021385;Parent=gene-IXO1088_021385;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472603.1;locus_tag=IXO1088_021385;product=HAD family hydrolase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4358282 4358632 . - . ID=gene-IXO1088_021390;Name=IXO1088_021390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021390;pseudo=true CP040687.1 Protein Homology CDS 4358282 4358632 . - 0 ID=cds-IXO1088_021390;Parent=gene-IXO1088_021390;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=IXO1088_021390;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4358665 4359120 . - . ID=gene-IXO1088_021395;Name=IXO1088_021395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021395 CP040687.1 Protein Homology CDS 4358665 4359120 . - 0 ID=cds-QIE17297.1;Parent=gene-IXO1088_021395;Dbxref=NCBI_GP:QIE17297.1;Name=QIE17297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638837.1;locus_tag=IXO1088_021395;product=nucleoside deaminase;protein_id=QIE17297.1;transl_table=11 CP040687.1 Genbank gene 4359117 4359617 . - . ID=gene-IXO1088_021400;Name=IXO1088_021400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021400 CP040687.1 Protein Homology CDS 4359117 4359617 . - 0 ID=cds-QIE17298.1;Parent=gene-IXO1088_021400;Dbxref=NCBI_GP:QIE17298.1;Name=QIE17298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159113.1;locus_tag=IXO1088_021400;product=GNAT family N-acetyltransferase;protein_id=QIE17298.1;transl_table=11 CP040687.1 Genbank pseudogene 4359718 4360718 . - . ID=gene-IXO1088_021405;Name=IXO1088_021405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021405;pseudo=true CP040687.1 Protein Homology CDS 4359718 4360718 . - 0 ID=cds-IXO1088_021405;Parent=gene-IXO1088_021405;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018420704.1;locus_tag=IXO1088_021405;product=IS630 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4360868 4361944 . - . ID=gene-IXO1088_021410;Name=IXO1088_021410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021410 CP040687.1 Protein Homology CDS 4360868 4361944 . - 0 ID=cds-QIE17299.1;Parent=gene-IXO1088_021410;Dbxref=NCBI_GP:QIE17299.1;Name=QIE17299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638835.2;locus_tag=IXO1088_021410;product=HlyD family secretion protein;protein_id=QIE17299.1;transl_table=11 CP040687.1 Genbank pseudogene 4361941 4363653 . - . ID=gene-IXO1088_021415;Name=IXO1088_021415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021415;pseudo=true CP040687.1 Protein Homology CDS 4361941 4363653 . - 0 ID=cds-IXO1088_021415;Parent=gene-IXO1088_021415;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303205.1;locus_tag=IXO1088_021415;product=MFS transporter;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4363683 4364444 . + . ID=gene-IXO1088_021420;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=IXO1088_021420 CP040687.1 Protein Homology CDS 4363683 4364444 . + 0 ID=cds-QIE17300.1;Parent=gene-IXO1088_021420;Dbxref=NCBI_GP:QIE17300.1;Name=QIE17300.1;gbkey=CDS;gene=ubiE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303204.1;locus_tag=IXO1088_021420;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=QIE17300.1;transl_table=11 CP040687.1 Genbank gene 4364617 4365507 . + . ID=gene-IXO1088_021425;Name=IXO1088_021425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021425 CP040687.1 Protein Homology CDS 4364617 4365507 . + 0 ID=cds-QIE17301.1;Parent=gene-IXO1088_021425;Dbxref=NCBI_GP:QIE17301.1;Name=QIE17301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302598.1;locus_tag=IXO1088_021425;product=GGDEF domain-containing protein;protein_id=QIE17301.1;transl_table=11 CP040687.1 Genbank gene 4365629 4367641 . + . ID=gene-IXO1088_021430;Name=IXO1088_021430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021430 CP040687.1 Protein Homology CDS 4365629 4367641 . + 0 ID=cds-QIE17302.1;Parent=gene-IXO1088_021430;Dbxref=NCBI_GP:QIE17302.1;Name=QIE17302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162760.1;locus_tag=IXO1088_021430;product=M1 family metallopeptidase;protein_id=QIE17302.1;transl_table=11 CP040687.1 Genbank gene 4367813 4368532 . + . ID=gene-IXO1088_021435;Name=IXO1088_021435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021435 CP040687.1 Protein Homology CDS 4367813 4368532 . + 0 ID=cds-QIE17303.1;Parent=gene-IXO1088_021435;Dbxref=NCBI_GP:QIE17303.1;Name=QIE17303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638830.1;locus_tag=IXO1088_021435;product=hypothetical protein;protein_id=QIE17303.1;transl_table=11 CP040687.1 Genbank gene 4368832 4369455 . + . ID=gene-IXO1088_021440;Name=IXO1088_021440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021440 CP040687.1 Protein Homology CDS 4368832 4369455 . + 0 ID=cds-QIE17304.1;Parent=gene-IXO1088_021440;Dbxref=NCBI_GP:QIE17304.1;Name=QIE17304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260358.1;locus_tag=IXO1088_021440;product=HAD family hydrolase;protein_id=QIE17304.1;transl_table=11 CP040687.1 Genbank gene 4369629 4370996 . - . ID=gene-IXO1088_021445;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=IXO1088_021445 CP040687.1 Protein Homology CDS 4369629 4370996 . - 0 ID=cds-QIE17305.1;Parent=gene-IXO1088_021445;Dbxref=NCBI_GP:QIE17305.1;Name=QIE17305.1;gbkey=CDS;gene=hslU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638839.1;locus_tag=IXO1088_021445;product=ATP-dependent protease ATPase subunit HslU;protein_id=QIE17305.1;transl_table=11 CP040687.1 Genbank gene 4371101 4371652 . - . ID=gene-IXO1088_021450;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=IXO1088_021450 CP040687.1 Protein Homology CDS 4371101 4371652 . - 0 ID=cds-QIE17306.1;Parent=gene-IXO1088_021450;Dbxref=NCBI_GP:QIE17306.1;Name=QIE17306.1;gbkey=CDS;gene=hslV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260360.1;locus_tag=IXO1088_021450;product=ATP-dependent protease subunit HslV;protein_id=QIE17306.1;transl_table=11 CP040687.1 Genbank gene 4371810 4371886 . - . ID=gene-IXO1088_021455;Name=IXO1088_021455;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_021455 CP040687.1 cmsearch ncRNA 4371810 4371886 . - . ID=rna-IXO1088_021455;Parent=gene-IXO1088_021455;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_021455;product=sX9 sRNA CP040687.1 cmsearch exon 4371810 4371886 . - . ID=exon-IXO1088_021455-1;Parent=rna-IXO1088_021455;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_021455;product=sX9 sRNA CP040687.1 Genbank gene 4372168 4373085 . - . ID=gene-IXO1088_021460;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=IXO1088_021460 CP040687.1 Protein Homology CDS 4372168 4373085 . - 0 ID=cds-QIE18105.1;Parent=gene-IXO1088_021460;Dbxref=NCBI_GP:QIE18105.1;Name=QIE18105.1;gbkey=CDS;gene=xerC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017173863.1;locus_tag=IXO1088_021460;product=tyrosine recombinase XerC;protein_id=QIE18105.1;transl_table=11 CP040687.1 Genbank gene 4373291 4373971 . - . ID=gene-IXO1088_021465;Name=IXO1088_021465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021465 CP040687.1 Protein Homology CDS 4373291 4373971 . - 0 ID=cds-QIE17307.1;Parent=gene-IXO1088_021465;Dbxref=NCBI_GP:QIE17307.1;Name=QIE17307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260362.1;locus_tag=IXO1088_021465;product=DUF484 family protein;protein_id=QIE17307.1;transl_table=11 CP040687.1 Genbank gene 4373959 4374813 . - . ID=gene-IXO1088_021470;Name=IXO1088_021470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021470 CP040687.1 Protein Homology CDS 4373959 4374813 . - 0 ID=cds-QIE17308.1;Parent=gene-IXO1088_021470;Dbxref=NCBI_GP:QIE17308.1;Name=QIE17308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260363.1;locus_tag=IXO1088_021470;product=diaminopimelate epimerase;protein_id=QIE17308.1;transl_table=11 CP040687.1 Genbank gene 4374803 4375039 . - . ID=gene-IXO1088_021475;Name=IXO1088_021475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021475 CP040687.1 Protein Homology CDS 4374803 4375039 . - 0 ID=cds-QIE17309.1;Parent=gene-IXO1088_021475;Dbxref=NCBI_GP:QIE17309.1;Name=QIE17309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638846.1;locus_tag=IXO1088_021475;product=sugar transporter;protein_id=QIE17309.1;transl_table=11 CP040687.1 Genbank gene 4375097 4375495 . - . ID=gene-IXO1088_021480;Name=IXO1088_021480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021480 CP040687.1 Protein Homology CDS 4375097 4375495 . - 0 ID=cds-QIE17310.1;Parent=gene-IXO1088_021480;Dbxref=NCBI_GP:QIE17310.1;Name=QIE17310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638847.1;locus_tag=IXO1088_021480;product=DUF454 domain-containing protein;protein_id=QIE17310.1;transl_table=11 CP040687.1 Genbank gene 4375868 4378003 . - . ID=gene-IXO1088_021485;Name=IXO1088_021485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021485 CP040687.1 Protein Homology CDS 4375868 4378003 . - 0 ID=cds-QIE17311.1;Parent=gene-IXO1088_021485;Dbxref=NCBI_GP:QIE17311.1;Name=QIE17311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501853.1;locus_tag=IXO1088_021485;product=oligopeptidase B;protein_id=QIE17311.1;transl_table=11 CP040687.1 Genbank gene 4378127 4379311 . + . ID=gene-IXO1088_021490;Name=IXO1088_021490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021490 CP040687.1 Protein Homology CDS 4378127 4379311 . + 0 ID=cds-QIE17312.1;Parent=gene-IXO1088_021490;Dbxref=NCBI_GP:QIE17312.1;Name=QIE17312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155429.1;locus_tag=IXO1088_021490;product=pyridoxal phosphate-dependent aminotransferase;protein_id=QIE17312.1;transl_table=11 CP040687.1 Genbank gene 4379585 4379645 . - . ID=gene-IXO1088_021495;Name=IXO1088_021495;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_021495 CP040687.1 cmsearch ncRNA 4379585 4379645 . - . ID=rna-IXO1088_021495;Parent=gene-IXO1088_021495;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_021495;product=sX9 sRNA CP040687.1 cmsearch exon 4379585 4379645 . - . ID=exon-IXO1088_021495-1;Parent=rna-IXO1088_021495;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_021495;product=sX9 sRNA CP040687.1 Genbank gene 4379637 4380068 . - . ID=gene-IXO1088_021500;Name=IXO1088_021500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021500 CP040687.1 GeneMarkS-2+ CDS 4379637 4380068 . - 0 ID=cds-QIE17313.1;Parent=gene-IXO1088_021500;Dbxref=NCBI_GP:QIE17313.1;Name=QIE17313.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_021500;product=hypothetical protein;protein_id=QIE17313.1;transl_table=11 CP040687.1 Genbank gene 4380151 4382244 . - . ID=gene-IXO1088_021505;Name=IXO1088_021505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021505 CP040687.1 Protein Homology CDS 4380151 4382244 . - 0 ID=cds-QIE17314.1;Parent=gene-IXO1088_021505;Dbxref=NCBI_GP:QIE17314.1;Name=QIE17314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638852.1;locus_tag=IXO1088_021505;product=S9 family peptidase;protein_id=QIE17314.1;transl_table=11 CP040687.1 Genbank gene 4382312 4382623 . - . ID=gene-IXO1088_021510;Name=IXO1088_021510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021510 CP040687.1 Protein Homology CDS 4382312 4382623 . - 0 ID=cds-QIE17315.1;Parent=gene-IXO1088_021510;Dbxref=NCBI_GP:QIE17315.1;Name=QIE17315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638853.1;locus_tag=IXO1088_021510;product=hypothetical protein;protein_id=QIE17315.1;transl_table=11 CP040687.1 Genbank gene 4383011 4383580 . + . ID=gene-IXO1088_021515;Name=IXO1088_021515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021515 CP040687.1 Protein Homology CDS 4383011 4383580 . + 0 ID=cds-QIE18106.1;Parent=gene-IXO1088_021515;Dbxref=NCBI_GP:QIE18106.1;Name=QIE18106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638854.2;locus_tag=IXO1088_021515;product=lipocalin family protein;protein_id=QIE18106.1;transl_table=11 CP040687.1 Genbank gene 4383689 4384654 . - . ID=gene-IXO1088_021520;Name=IXO1088_021520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021520 CP040687.1 Protein Homology CDS 4383689 4384654 . - 0 ID=cds-QIE17316.1;Parent=gene-IXO1088_021520;Dbxref=NCBI_GP:QIE17316.1;Name=QIE17316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638855.1;locus_tag=IXO1088_021520;product=YafY family transcriptional regulator;protein_id=QIE17316.1;transl_table=11 CP040687.1 Genbank gene 4385213 4386013 . + . ID=gene-IXO1088_021525;Name=IXO1088_021525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021525 CP040687.1 Protein Homology CDS 4385213 4386013 . + 0 ID=cds-QIE17317.1;Parent=gene-IXO1088_021525;Dbxref=NCBI_GP:QIE17317.1;Name=QIE17317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638856.1;locus_tag=IXO1088_021525;product=DUF481 domain-containing protein;protein_id=QIE17317.1;transl_table=11 CP040687.1 Genbank gene 4386564 4387478 . - . ID=gene-IXO1088_021530;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=IXO1088_021530 CP040687.1 Protein Homology CDS 4386564 4387478 . - 0 ID=cds-QIE17318.1;Parent=gene-IXO1088_021530;Dbxref=NCBI_GP:QIE17318.1;Name=QIE17318.1;gbkey=CDS;gene=hemC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638857.1;locus_tag=IXO1088_021530;product=hydroxymethylbilane synthase;protein_id=QIE17318.1;transl_table=11 CP040687.1 Genbank gene 4387509 4388246 . - . ID=gene-IXO1088_021535;Name=IXO1088_021535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021535 CP040687.1 Protein Homology CDS 4387509 4388246 . - 0 ID=cds-QIE17319.1;Parent=gene-IXO1088_021535;Dbxref=NCBI_GP:QIE17319.1;Name=QIE17319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915517.1;locus_tag=IXO1088_021535;product=response regulator transcription factor;protein_id=QIE17319.1;transl_table=11 CP040687.1 Genbank gene 4388277 4389329 . - . ID=gene-IXO1088_021540;Name=IXO1088_021540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021540 CP040687.1 Protein Homology CDS 4388277 4389329 . - 0 ID=cds-QIE17320.1;Parent=gene-IXO1088_021540;Dbxref=NCBI_GP:QIE17320.1;Name=QIE17320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409486.1;locus_tag=IXO1088_021540;product=sensor histidine kinase;protein_id=QIE17320.1;transl_table=11 CP040687.1 Genbank gene 4389334 4390002 . - . ID=gene-IXO1088_021545;Name=IXO1088_021545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021545 CP040687.1 Protein Homology CDS 4389334 4390002 . - 0 ID=cds-QIE17321.1;Parent=gene-IXO1088_021545;Dbxref=NCBI_GP:QIE17321.1;Name=QIE17321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050437.1;locus_tag=IXO1088_021545;product=alpha/beta hydrolase;protein_id=QIE17321.1;transl_table=11 CP040687.1 Genbank gene 4390154 4392091 . - . ID=gene-IXO1088_021550;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=IXO1088_021550 CP040687.1 Protein Homology CDS 4390154 4392091 . - 0 ID=cds-QIE17322.1;Parent=gene-IXO1088_021550;Dbxref=NCBI_GP:QIE17322.1;Name=QIE17322.1;gbkey=CDS;gene=mdoH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638861.1;locus_tag=IXO1088_021550;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=QIE17322.1;transl_table=11 CP040687.1 Genbank pseudogene 4392152 4392515 . + . ID=gene-IXO1088_021555;Name=IXO1088_021555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021555;pseudo=true CP040687.1 Protein Homology CDS 4392152 4392515 . + 0 ID=cds-IXO1088_021555;Parent=gene-IXO1088_021555;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915511.1;locus_tag=IXO1088_021555;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4392563 4392639 . - . ID=gene-IXO1088_021560;Name=IXO1088_021560;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_021560 CP040687.1 cmsearch ncRNA 4392563 4392639 . - . ID=rna-IXO1088_021560;Parent=gene-IXO1088_021560;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_021560;product=sX9 sRNA CP040687.1 cmsearch exon 4392563 4392639 . - . ID=exon-IXO1088_021560-1;Parent=rna-IXO1088_021560;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_021560;product=sX9 sRNA CP040687.1 Genbank pseudogene 4392818 4393191 . + . ID=gene-IXO1088_021565;Name=IXO1088_021565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021565;pseudo=true CP040687.1 Protein Homology CDS 4392818 4393191 . + 0 ID=cds-IXO1088_021565;Parent=gene-IXO1088_021565;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_021565;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4393206 4394441 . - . ID=gene-IXO1088_021570;Name=IXO1088_021570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021570 CP040687.1 Protein Homology CDS 4393206 4394441 . - 0 ID=cds-QIE17323.1;Parent=gene-IXO1088_021570;Dbxref=NCBI_GP:QIE17323.1;Name=QIE17323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1088_021570;product=ISL3-like element ISXoo13 family transposase;protein_id=QIE17323.1;transl_table=11 CP040687.1 Genbank pseudogene 4394506 4394901 . + . ID=gene-IXO1088_021575;Name=IXO1088_021575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021575;pseudo=true CP040687.1 Protein Homology CDS 4394506 4394901 . + 0 ID=cds-IXO1088_021575;Parent=gene-IXO1088_021575;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_021575;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4395027 4395287 . + . ID=gene-IXO1088_021580;Name=IXO1088_021580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021580 CP040687.1 Protein Homology CDS 4395027 4395287 . + 0 ID=cds-QIE17324.1;Parent=gene-IXO1088_021580;Dbxref=NCBI_GP:QIE17324.1;Name=QIE17324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118760.1;locus_tag=IXO1088_021580;product=hypothetical protein;protein_id=QIE17324.1;transl_table=11 CP040687.1 Genbank gene 4395215 4396864 . - . ID=gene-IXO1088_021585;Name=IXO1088_021585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021585 CP040687.1 Protein Homology CDS 4395215 4396864 . - 0 ID=cds-QIE17325.1;Parent=gene-IXO1088_021585;Dbxref=NCBI_GP:QIE17325.1;Name=QIE17325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638863.1;locus_tag=IXO1088_021585;product=M28 family peptidase;protein_id=QIE17325.1;transl_table=11 CP040687.1 Genbank pseudogene 4397033 4397985 . - . ID=gene-IXO1088_021590;Name=IXO1088_021590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021590;pseudo=true CP040687.1 Protein Homology CDS 4397033 4397985 . - 0 ID=cds-IXO1088_021590;Parent=gene-IXO1088_021590;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638865.2;locus_tag=IXO1088_021590;product=GGDEF domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4398255 4399742 . - . ID=gene-IXO1088_021595;Name=IXO1088_021595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021595 CP040687.1 Protein Homology CDS 4398255 4399742 . - 0 ID=cds-QIE17326.1;Parent=gene-IXO1088_021595;Dbxref=NCBI_GP:QIE17326.1;Name=QIE17326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116599.1;locus_tag=IXO1088_021595;product=SulP family inorganic anion transporter;protein_id=QIE17326.1;transl_table=11 CP040687.1 Genbank gene 4399950 4401410 . + . ID=gene-IXO1088_021600;Name=IXO1088_021600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021600 CP040687.1 Protein Homology CDS 4399950 4401410 . + 0 ID=cds-QIE17327.1;Parent=gene-IXO1088_021600;Dbxref=NCBI_GP:QIE17327.1;Name=QIE17327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444069.1;locus_tag=IXO1088_021600;product=endoglucanase;protein_id=QIE17327.1;transl_table=11 CP040687.1 Genbank gene 4401572 4401892 . + . ID=gene-IXO1088_021605;Name=IXO1088_021605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021605 CP040687.1 GeneMarkS-2+ CDS 4401572 4401892 . + 0 ID=cds-QIE17328.1;Parent=gene-IXO1088_021605;Dbxref=NCBI_GP:QIE17328.1;Name=QIE17328.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_021605;product=histidine kinase;protein_id=QIE17328.1;transl_table=11 CP040687.1 Genbank gene 4401892 4402119 . + . ID=gene-IXO1088_021610;Name=IXO1088_021610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021610 CP040687.1 Protein Homology CDS 4401892 4402119 . + 0 ID=cds-QIE18107.1;Parent=gene-IXO1088_021610;Dbxref=NCBI_GP:QIE18107.1;Name=QIE18107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260381.1;locus_tag=IXO1088_021610;product=chemotaxis protein;protein_id=QIE18107.1;transl_table=11 CP040687.1 Genbank gene 4402124 4402200 . - . ID=gene-IXO1088_021615;Name=IXO1088_021615;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_021615 CP040687.1 cmsearch ncRNA 4402124 4402200 . - . ID=rna-IXO1088_021615;Parent=gene-IXO1088_021615;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_021615;product=sX9 sRNA CP040687.1 cmsearch exon 4402124 4402200 . - . ID=exon-IXO1088_021615-1;Parent=rna-IXO1088_021615;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_021615;product=sX9 sRNA CP040687.1 Genbank gene 4402645 4405269 . - . ID=gene-IXO1088_021620;Name=IXO1088_021620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021620 CP040687.1 Protein Homology CDS 4402645 4405269 . - 0 ID=cds-QIE17329.1;Parent=gene-IXO1088_021620;Dbxref=NCBI_GP:QIE17329.1;Name=QIE17329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409492.1;locus_tag=IXO1088_021620;product=PAS domain S-box protein;protein_id=QIE17329.1;transl_table=11 CP040687.1 Genbank gene 4405524 4408412 . + . ID=gene-IXO1088_021625;Name=IXO1088_021625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021625 CP040687.1 Protein Homology CDS 4405524 4408412 . + 0 ID=cds-QIE17330.1;Parent=gene-IXO1088_021625;Dbxref=NCBI_GP:QIE17330.1;Name=QIE17330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260383.1;locus_tag=IXO1088_021625;product=insulinase family protein;protein_id=QIE17330.1;transl_table=11 CP040687.1 Genbank gene 4408960 4409889 . + . ID=gene-IXO1088_021630;Name=IXO1088_021630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021630 CP040687.1 Protein Homology CDS 4408960 4409889 . + 0 ID=cds-QIE17331.1;Parent=gene-IXO1088_021630;Dbxref=NCBI_GP:QIE17331.1;Name=QIE17331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118451.1;locus_tag=IXO1088_021630;product=GAF domain-containing protein;protein_id=QIE17331.1;transl_table=11 CP040687.1 Genbank gene 4409928 4410932 . - . ID=gene-IXO1088_021635;Name=IXO1088_021635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021635 CP040687.1 Protein Homology CDS 4409928 4410932 . - 0 ID=cds-QIE17332.1;Parent=gene-IXO1088_021635;Dbxref=NCBI_GP:QIE17332.1;Name=QIE17332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376082.1;locus_tag=IXO1088_021635;product=hypothetical protein;protein_id=QIE17332.1;transl_table=11 CP040687.1 Genbank gene 4411175 4411938 . - . ID=gene-IXO1088_021640;Name=IXO1088_021640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021640 CP040687.1 Protein Homology CDS 4411623 4411938 . - 0 ID=cds-QIE17333.1;Parent=gene-IXO1088_021640;Dbxref=NCBI_GP:QIE17333.1;Name=QIE17333.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_021640;product=IS5 family transposase;protein_id=QIE17333.1;transl_table=11 CP040687.1 Protein Homology CDS 4411175 4411623 . - 2 ID=cds-QIE17333.1;Parent=gene-IXO1088_021640;Dbxref=NCBI_GP:QIE17333.1;Name=QIE17333.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_021640;product=IS5 family transposase;protein_id=QIE17333.1;transl_table=11 CP040687.1 Genbank pseudogene 4412134 4412886 . - . ID=gene-IXO1088_021645;Name=IXO1088_021645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021645;pseudo=true CP040687.1 Protein Homology CDS 4412134 4412886 . - 0 ID=cds-IXO1088_021645;Parent=gene-IXO1088_021645;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638873.1;locus_tag=IXO1088_021645;product=endonuclease;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4412986 4413771 . + . ID=gene-IXO1088_021650;Name=IXO1088_021650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021650 CP040687.1 Protein Homology CDS 4412986 4413771 . + 0 ID=cds-QIE18108.1;Parent=gene-IXO1088_021650;Dbxref=NCBI_GP:QIE18108.1;Name=QIE18108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902976.1;locus_tag=IXO1088_021650;product=DUF72 domain-containing protein;protein_id=QIE18108.1;transl_table=11 CP040687.1 Genbank gene 4413794 4414000 . - . ID=gene-IXO1088_021655;Name=IXO1088_021655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021655 CP040687.1 Protein Homology CDS 4413794 4414000 . - 0 ID=cds-QIE17334.1;Parent=gene-IXO1088_021655;Dbxref=NCBI_GP:QIE17334.1;Name=QIE17334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444057.1;locus_tag=IXO1088_021655;product=hypothetical protein;protein_id=QIE17334.1;transl_table=11 CP040687.1 Genbank gene 4414025 4415698 . + . ID=gene-IXO1088_021660;Name=treA;gbkey=Gene;gene=treA;gene_biotype=protein_coding;locus_tag=IXO1088_021660 CP040687.1 Protein Homology CDS 4414025 4415698 . + 0 ID=cds-QIE17335.1;Parent=gene-IXO1088_021660;Dbxref=NCBI_GP:QIE17335.1;Name=QIE17335.1;gbkey=CDS;gene=treA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167145.1;locus_tag=IXO1088_021660;product=alpha%2Calpha-trehalase TreA;protein_id=QIE17335.1;transl_table=11 CP040687.1 Genbank gene 4416115 4417434 . + . ID=gene-IXO1088_021665;Name=IXO1088_021665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021665 CP040687.1 Protein Homology CDS 4416115 4417434 . + 0 ID=cds-QIE17336.1;Parent=gene-IXO1088_021665;Dbxref=NCBI_GP:QIE17336.1;Name=QIE17336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_021665;product=IS701 family transposase;protein_id=QIE17336.1;transl_table=11 CP040687.1 Genbank gene 4417647 4418615 . - . ID=gene-IXO1088_021670;Name=IXO1088_021670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021670 CP040687.1 Protein Homology CDS 4417647 4418615 . - 0 ID=cds-QIE17337.1;Parent=gene-IXO1088_021670;Dbxref=NCBI_GP:QIE17337.1;Name=QIE17337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_021670;product=IS5-like element ISXo1 family transposase;protein_id=QIE17337.1;transl_table=11 CP040687.1 Genbank gene 4418879 4419325 . - . ID=gene-IXO1088_021675;Name=IXO1088_021675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021675 CP040687.1 Protein Homology CDS 4418879 4419325 . - 0 ID=cds-QIE17338.1;Parent=gene-IXO1088_021675;Dbxref=NCBI_GP:QIE17338.1;Name=QIE17338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158413.1;locus_tag=IXO1088_021675;product=autotransporter;protein_id=QIE17338.1;transl_table=11 CP040687.1 Genbank gene 4419656 4419940 . + . ID=gene-IXO1088_021680;Name=IXO1088_021680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021680 CP040687.1 Protein Homology CDS 4419656 4419940 . + 0 ID=cds-QIE17339.1;Parent=gene-IXO1088_021680;Dbxref=NCBI_GP:QIE17339.1;Name=QIE17339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444053.1;locus_tag=IXO1088_021680;product=hypothetical protein;protein_id=QIE17339.1;transl_table=11 CP040687.1 Genbank pseudogene 4420059 4420331 . + . ID=gene-IXO1088_021685;Name=IXO1088_021685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021685;pseudo=true CP040687.1 Protein Homology CDS 4420059 4420331 . + 0 ID=cds-IXO1088_021685;Parent=gene-IXO1088_021685;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638876.1;locus_tag=IXO1088_021685;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4420535 4421446 . - . ID=gene-IXO1088_021690;Name=IXO1088_021690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021690 CP040687.1 Protein Homology CDS 4420535 4421446 . - 0 ID=cds-QIE17340.1;Parent=gene-IXO1088_021690;Dbxref=NCBI_GP:QIE17340.1;Name=QIE17340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501814.1;locus_tag=IXO1088_021690;product=magnesium transporter;protein_id=QIE17340.1;transl_table=11 CP040687.1 Genbank gene 4421692 4422687 . + . ID=gene-IXO1088_021695;Name=IXO1088_021695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021695 CP040687.1 Protein Homology CDS 4421692 4422687 . + 0 ID=cds-QIE17341.1;Parent=gene-IXO1088_021695;Dbxref=NCBI_GP:QIE17341.1;Name=QIE17341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155501.1;locus_tag=IXO1088_021695;product=type III secretion system effector protein;protein_id=QIE17341.1;transl_table=11 CP040687.1 Genbank gene 4422781 4424157 . - . ID=gene-IXO1088_021700;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=IXO1088_021700 CP040687.1 Protein Homology CDS 4422781 4424157 . - 0 ID=cds-QIE17342.1;Parent=gene-IXO1088_021700;Dbxref=NCBI_GP:QIE17342.1;Name=QIE17342.1;gbkey=CDS;gene=cycA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966060.1;locus_tag=IXO1088_021700;product=D-serine/D-alanine/glycine transporter;protein_id=QIE17342.1;transl_table=11 CP040687.1 Genbank pseudogene 4424833 4425167 . - . ID=gene-IXO1088_021705;Name=IXO1088_021705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021705;pseudo=true CP040687.1 Protein Homology CDS 4424833 4425167 . - 0 ID=cds-IXO1088_021705;Parent=gene-IXO1088_021705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155503.1;locus_tag=IXO1088_021705;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4425324 4427024 . + . ID=gene-IXO1088_021710;Name=IXO1088_021710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021710 CP040687.1 Protein Homology CDS 4425324 4427024 . + 0 ID=cds-QIE17343.1;Parent=gene-IXO1088_021710;Dbxref=NCBI_GP:QIE17343.1;Name=QIE17343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638880.1;locus_tag=IXO1088_021710;product=1%2C4-beta-cellobiosidase;protein_id=QIE17343.1;transl_table=11 CP040687.1 Genbank gene 4427433 4429205 . + . ID=gene-IXO1088_021715;Name=IXO1088_021715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021715 CP040687.1 Protein Homology CDS 4427433 4429205 . + 0 ID=cds-QIE18109.1;Parent=gene-IXO1088_021715;Dbxref=NCBI_GP:QIE18109.1;Name=QIE18109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638881.1;locus_tag=IXO1088_021715;product=cellulase;protein_id=QIE18109.1;transl_table=11 CP040687.1 Genbank gene 4429481 4430365 . - . ID=gene-IXO1088_021720;Name=IXO1088_021720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021720 CP040687.1 Protein Homology CDS 4429481 4430365 . - 0 ID=cds-QIE17344.1;Parent=gene-IXO1088_021720;Dbxref=NCBI_GP:QIE17344.1;Name=QIE17344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638884.1;locus_tag=IXO1088_021720;product=DMT family transporter;protein_id=QIE17344.1;transl_table=11 CP040687.1 Genbank gene 4430554 4431432 . + . ID=gene-IXO1088_021725;Name=IXO1088_021725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021725 CP040687.1 Protein Homology CDS 4430554 4431432 . + 0 ID=cds-QIE18110.1;Parent=gene-IXO1088_021725;Dbxref=NCBI_GP:QIE18110.1;Name=QIE18110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915476.1;locus_tag=IXO1088_021725;product=SAM-dependent methyltransferase;protein_id=QIE18110.1;transl_table=11 CP040687.1 Genbank pseudogene 4431632 4432030 . + . ID=gene-IXO1088_021730;Name=IXO1088_021730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021730;pseudo=true CP040687.1 Protein Homology CDS 4431632 4432030 . + 0 ID=cds-IXO1088_021730;Parent=gene-IXO1088_021730;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368350.1;locus_tag=IXO1088_021730;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4432024 4433096 . + . ID=gene-IXO1088_021735;Name=IXO1088_021735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021735;pseudo=true CP040687.1 Protein Homology CDS 4432024 4433096 . + 0 ID=cds-IXO1088_021735;Parent=gene-IXO1088_021735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020261047.1;locus_tag=IXO1088_021735;product=IS630 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4433472 4434563 . + . ID=gene-IXO1088_021740;Name=IXO1088_021740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021740 CP040687.1 Protein Homology CDS 4433472 4434563 . + 0 ID=cds-QIE17345.1;Parent=gene-IXO1088_021740;Dbxref=NCBI_GP:QIE17345.1;Name=QIE17345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804659.1;locus_tag=IXO1088_021740;product=DUF1615 domain-containing protein;protein_id=QIE17345.1;transl_table=11 CP040687.1 Genbank pseudogene 4434614 4436046 . - . ID=gene-IXO1088_021745;Name=IXO1088_021745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021745;pseudo=true CP040687.1 Protein Homology CDS 4434614 4436046 . - 0 ID=cds-IXO1088_021745;Parent=gene-IXO1088_021745;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155515.1;locus_tag=IXO1088_021745;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4436466 4438790 . + . ID=gene-IXO1088_021750;Name=IXO1088_021750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021750 CP040687.1 Protein Homology CDS 4436466 4438790 . + 0 ID=cds-QIE17346.1;Parent=gene-IXO1088_021750;Dbxref=NCBI_GP:QIE17346.1;Name=QIE17346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158410.1;locus_tag=IXO1088_021750;product=S9 family peptidase;protein_id=QIE17346.1;transl_table=11 CP040687.1 Genbank gene 4438860 4438926 . - . ID=gene-IXO1088_021755;Name=IXO1088_021755;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_021755 CP040687.1 cmsearch ncRNA 4438860 4438926 . - . ID=rna-IXO1088_021755;Parent=gene-IXO1088_021755;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_021755;product=sX9 sRNA CP040687.1 cmsearch exon 4438860 4438926 . - . ID=exon-IXO1088_021755-1;Parent=rna-IXO1088_021755;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_021755;product=sX9 sRNA CP040687.1 Genbank gene 4438986 4440932 . - . ID=gene-IXO1088_021760;Name=IXO1088_021760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021760 CP040687.1 Protein Homology CDS 4438986 4440932 . - 0 ID=cds-QIE17347.1;Parent=gene-IXO1088_021760;Dbxref=NCBI_GP:QIE17347.1;Name=QIE17347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409508.1;locus_tag=IXO1088_021760;product=S9 family peptidase;protein_id=QIE17347.1;transl_table=11 CP040687.1 Genbank pseudogene 4441122 4441295 . + . ID=gene-IXO1088_021765;Name=IXO1088_021765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021765;pseudo=true CP040687.1 Protein Homology CDS 4441122 4441295 . + 0 ID=cds-IXO1088_021765;Parent=gene-IXO1088_021765;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802850.1;locus_tag=IXO1088_021765;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4441307 4441498 . + . ID=gene-IXO1088_021770;Name=IXO1088_021770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021770 CP040687.1 Protein Homology CDS 4441307 4441498 . + 0 ID=cds-QIE17348.1;Parent=gene-IXO1088_021770;Dbxref=NCBI_GP:QIE17348.1;Name=QIE17348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302144.1;locus_tag=IXO1088_021770;product=hypothetical protein;protein_id=QIE17348.1;transl_table=11 CP040687.1 Genbank gene 4441574 4441649 . + . ID=gene-IXO1088_021775;Name=IXO1088_021775;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_021775 CP040687.1 cmsearch ncRNA 4441574 4441649 . + . ID=rna-IXO1088_021775;Parent=gene-IXO1088_021775;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_021775;product=sX9 sRNA CP040687.1 cmsearch exon 4441574 4441649 . + . ID=exon-IXO1088_021775-1;Parent=rna-IXO1088_021775;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_021775;product=sX9 sRNA CP040687.1 Genbank gene 4441889 4443472 . + . ID=gene-IXO1088_021780;Name=IXO1088_021780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021780 CP040687.1 Protein Homology CDS 4441889 4443472 . + 0 ID=cds-QIE17349.1;Parent=gene-IXO1088_021780;Dbxref=NCBI_GP:QIE17349.1;Name=QIE17349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_638909.1;locus_tag=IXO1088_021780;product=SDR family oxidoreductase;protein_id=QIE17349.1;transl_table=11 CP040687.1 Genbank gene 4443804 4444400 . - . ID=gene-IXO1088_021785;Name=IXO1088_021785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021785 CP040687.1 Protein Homology CDS 4443804 4444400 . - 0 ID=cds-QIE17350.1;Parent=gene-IXO1088_021785;Dbxref=NCBI_GP:QIE17350.1;Name=QIE17350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112931.1;locus_tag=IXO1088_021785;product=hypothetical protein;protein_id=QIE17350.1;transl_table=11 CP040687.1 Genbank pseudogene 4444599 4445700 . - . ID=gene-IXO1088_021790;Name=IXO1088_021790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021790;pseudo=true CP040687.1 Protein Homology CDS 4444599 4445700 . - 0 ID=cds-IXO1088_021790;Parent=gene-IXO1088_021790;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1088_021790;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4445749 4446597 . - . ID=gene-IXO1088_021795;Name=IXO1088_021795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021795 CP040687.1 Protein Homology CDS 4445749 4446597 . - 0 ID=cds-QIE17351.1;Parent=gene-IXO1088_021795;Dbxref=NCBI_GP:QIE17351.1;Name=QIE17351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409513.1;locus_tag=IXO1088_021795;product=threonine aldolase;protein_id=QIE17351.1;transl_table=11 CP040687.1 Genbank gene 4446632 4448107 . - . ID=gene-IXO1088_021800;Name=IXO1088_021800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021800 CP040687.1 Protein Homology CDS 4446632 4448107 . - 0 ID=cds-QIE17352.1;Parent=gene-IXO1088_021800;Dbxref=NCBI_GP:QIE17352.1;Name=QIE17352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635853.1;locus_tag=IXO1088_021800;product=anthranilate synthase component I;protein_id=QIE17352.1;transl_table=11 CP040687.1 Genbank gene 4448712 4449641 . - . ID=gene-IXO1088_021805;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=IXO1088_021805 CP040687.1 Protein Homology CDS 4448712 4449641 . - 0 ID=cds-QIE17353.1;Parent=gene-IXO1088_021805;Dbxref=NCBI_GP:QIE17353.1;Name=QIE17353.1;gbkey=CDS;gene=yegS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260408.1;locus_tag=IXO1088_021805;product=lipid kinase YegS;protein_id=QIE17353.1;transl_table=11 CP040687.1 Genbank gene 4449876 4450367 . - . ID=gene-IXO1088_021810;Name=IXO1088_021810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021810 CP040687.1 Protein Homology CDS 4449876 4450367 . - 0 ID=cds-QIE17354.1;Parent=gene-IXO1088_021810;Dbxref=NCBI_GP:QIE17354.1;Name=QIE17354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368051.1;locus_tag=IXO1088_021810;product=GNAT family N-acetyltransferase;protein_id=QIE17354.1;transl_table=11 CP040687.1 Genbank gene 4450364 4451035 . - . ID=gene-IXO1088_021815;Name=IXO1088_021815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021815 CP040687.1 Protein Homology CDS 4450364 4451035 . - 0 ID=cds-QIE18111.1;Parent=gene-IXO1088_021815;Dbxref=NCBI_GP:QIE18111.1;Name=QIE18111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635850.2;locus_tag=IXO1088_021815;product=ribulose-phosphate 3-epimerase;protein_id=QIE18111.1;transl_table=11 CP040687.1 Genbank gene 4451430 4451759 . - . ID=gene-IXO1088_021820;Name=IXO1088_021820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021820 CP040687.1 Protein Homology CDS 4451430 4451759 . - 0 ID=cds-QIE17355.1;Parent=gene-IXO1088_021820;Dbxref=NCBI_GP:QIE17355.1;Name=QIE17355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635848.1;locus_tag=IXO1088_021820;product=J domain-containing protein;protein_id=QIE17355.1;transl_table=11 CP040687.1 Genbank gene 4451962 4452894 . + . ID=gene-IXO1088_021825;Name=IXO1088_021825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021825 CP040687.1 Protein Homology CDS 4451962 4452894 . + 0 ID=cds-QIE17356.1;Parent=gene-IXO1088_021825;Dbxref=NCBI_GP:QIE17356.1;Name=QIE17356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635847.1;locus_tag=IXO1088_021825;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=QIE17356.1;transl_table=11 CP040687.1 Genbank pseudogene 4453357 4453740 . + . ID=gene-IXO1088_021830;Name=IXO1088_021830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021830;pseudo=true CP040687.1 Protein Homology CDS 4453357 4453740 . + 0 ID=cds-IXO1088_021830;Parent=gene-IXO1088_021830;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113468.1;locus_tag=IXO1088_021830;product=NYN domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4453766 4454800 . - . ID=gene-IXO1088_021835;Name=IXO1088_021835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021835 CP040687.1 Protein Homology CDS 4453766 4454800 . - 0 ID=cds-QIE18112.1;Parent=gene-IXO1088_021835;Dbxref=NCBI_GP:QIE18112.1;Name=QIE18112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611268.1;locus_tag=IXO1088_021835;product=IS630 family transposase;protein_id=QIE18112.1;transl_table=11 CP040687.1 Genbank pseudogene 4454854 4455150 . + . ID=gene-IXO1088_021840;Name=IXO1088_021840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021840;pseudo=true CP040687.1 Protein Homology CDS 4454854 4455150 . + 0 ID=cds-IXO1088_021840;Parent=gene-IXO1088_021840;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113468.1;locus_tag=IXO1088_021840;product=NYN domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4455159 4455545 . + . ID=gene-IXO1088_021845;Name=IXO1088_021845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021845;pseudo=true CP040687.1 Protein Homology CDS 4455159 4455545 . + 0 ID=cds-IXO1088_021845;Parent=gene-IXO1088_021845;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635843.1;locus_tag=IXO1088_021845;product=lytic enzyme;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4455974 4457526 . + . ID=gene-IXO1088_021850;Name=IXO1088_021850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021850;pseudo=true CP040687.1 Protein Homology CDS 4455974 4457526 . + 0 ID=cds-IXO1088_021850;Parent=gene-IXO1088_021850;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967835.1;locus_tag=IXO1088_021850;product=M4 family metallopeptidase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4457668 4458153 . + . ID=gene-IXO1088_021855;Name=IXO1088_021855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021855 CP040687.1 Protein Homology CDS 4457668 4458153 . + 0 ID=cds-QIE17357.1;Parent=gene-IXO1088_021855;Dbxref=NCBI_GP:QIE17357.1;Name=QIE17357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635842.1;locus_tag=IXO1088_021855;product=DUF962 domain-containing protein;protein_id=QIE17357.1;transl_table=11 CP040687.1 Genbank pseudogene 4458179 4458525 . - . ID=gene-IXO1088_021860;Name=IXO1088_021860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021860;pseudo=true CP040687.1 Protein Homology CDS 4458179 4458525 . - 0 ID=cds-IXO1088_021860;Parent=gene-IXO1088_021860;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575559.1;locus_tag=IXO1088_021860;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4458692 4461520 . + . ID=gene-IXO1088_021865;Name=IXO1088_021865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021865 CP040687.1 Protein Homology CDS 4458692 4461520 . + 0 ID=cds-QIE17358.1;Parent=gene-IXO1088_021865;Dbxref=NCBI_GP:QIE17358.1;Name=QIE17358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635840.1;locus_tag=IXO1088_021865;product=monovalent cation/H+ antiporter subunit A;protein_id=QIE17358.1;transl_table=11 CP040687.1 Genbank gene 4461520 4461894 . + . ID=gene-IXO1088_021870;Name=IXO1088_021870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021870 CP040687.1 Protein Homology CDS 4461520 4461894 . + 0 ID=cds-QIE17359.1;Parent=gene-IXO1088_021870;Dbxref=NCBI_GP:QIE17359.1;Name=QIE17359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346152.1;locus_tag=IXO1088_021870;product=Na+/H+ antiporter subunit C;protein_id=QIE17359.1;transl_table=11 CP040687.1 Genbank gene 4461891 4463435 . + . ID=gene-IXO1088_021875;Name=IXO1088_021875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021875 CP040687.1 Protein Homology CDS 4461891 4463435 . + 0 ID=cds-QIE17360.1;Parent=gene-IXO1088_021875;Dbxref=NCBI_GP:QIE17360.1;Name=QIE17360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635838.1;locus_tag=IXO1088_021875;product=monovalent cation/H+ antiporter subunit D;protein_id=QIE17360.1;transl_table=11 CP040687.1 Genbank gene 4463432 4463938 . + . ID=gene-IXO1088_021880;Name=IXO1088_021880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021880 CP040687.1 Protein Homology CDS 4463432 4463938 . + 0 ID=cds-QIE17361.1;Parent=gene-IXO1088_021880;Dbxref=NCBI_GP:QIE17361.1;Name=QIE17361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635837.1;locus_tag=IXO1088_021880;product=Na+/H+ antiporter subunit E;protein_id=QIE17361.1;transl_table=11 CP040687.1 Genbank gene 4463935 4464219 . + . ID=gene-IXO1088_021885;Name=IXO1088_021885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021885 CP040687.1 Protein Homology CDS 4463935 4464219 . + 0 ID=cds-QIE17362.1;Parent=gene-IXO1088_021885;Dbxref=NCBI_GP:QIE17362.1;Name=QIE17362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635836.1;locus_tag=IXO1088_021885;product=K+/H+ antiporter subunit F;protein_id=QIE17362.1;transl_table=11 CP040687.1 Genbank gene 4464216 4464569 . + . ID=gene-IXO1088_021890;Name=IXO1088_021890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021890 CP040687.1 Protein Homology CDS 4464216 4464569 . + 0 ID=cds-QIE17363.1;Parent=gene-IXO1088_021890;Dbxref=NCBI_GP:QIE17363.1;Name=QIE17363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302193.1;locus_tag=IXO1088_021890;product=Na+/H+ antiporter subunit G;protein_id=QIE17363.1;transl_table=11 CP040687.1 Genbank gene 4465168 4466124 . + . ID=gene-IXO1088_021895;Name=IXO1088_021895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021895 CP040687.1 Protein Homology CDS 4465168 4466124 . + 0 ID=cds-QIE17364.1;Parent=gene-IXO1088_021895;Dbxref=NCBI_GP:QIE17364.1;Name=QIE17364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=IXO1088_021895;product=IS30-like element IS1112a family transposase;protein_id=QIE17364.1;transl_table=11 CP040687.1 Genbank pseudogene 4466129 4466413 . + . ID=gene-IXO1088_021900;Name=IXO1088_021900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021900;pseudo=true CP040687.1 Protein Homology CDS 4466129 4466413 . + 0 ID=cds-IXO1088_021900;Parent=gene-IXO1088_021900;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409527.1;locus_tag=IXO1088_021900;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4466526 4466594 . - . ID=gene-IXO1088_021905;Name=IXO1088_021905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021905;pseudo=true CP040687.1 Protein Homology CDS 4466526 4466594 . - 0 ID=cds-IXO1088_021905;Parent=gene-IXO1088_021905;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258967.1;locus_tag=IXO1088_021905;product=glyoxalase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4466597 4467565 . + . ID=gene-IXO1088_021910;Name=IXO1088_021910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021910 CP040687.1 Protein Homology CDS 4466597 4467565 . + 0 ID=cds-QIE17365.1;Parent=gene-IXO1088_021910;Dbxref=NCBI_GP:QIE17365.1;Name=QIE17365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_021910;product=IS5-like element ISXo1 family transposase;protein_id=QIE17365.1;transl_table=11 CP040687.1 Genbank gene 4467997 4469322 . - . ID=gene-IXO1088_021915;Name=IXO1088_021915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021915 CP040687.1 Protein Homology CDS 4467997 4469322 . - 0 ID=cds-QIE17366.1;Parent=gene-IXO1088_021915;Dbxref=NCBI_GP:QIE17366.1;Name=QIE17366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501682.1;locus_tag=IXO1088_021915;product=homogentisate 1%2C2-dioxygenase;protein_id=QIE17366.1;transl_table=11 CP040687.1 Genbank gene 4469687 4470757 . - . ID=gene-IXO1088_021920;Name=hppD;gbkey=Gene;gene=hppD;gene_biotype=protein_coding;locus_tag=IXO1088_021920 CP040687.1 Protein Homology CDS 4469687 4470757 . - 0 ID=cds-QIE18113.1;Parent=gene-IXO1088_021920;Dbxref=NCBI_GP:QIE18113.1;Name=QIE18113.1;gbkey=CDS;gene=hppD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635830.1;locus_tag=IXO1088_021920;product=4-hydroxyphenylpyruvate dioxygenase;protein_id=QIE18113.1;transl_table=11 CP040687.1 Genbank gene 4470928 4471416 . + . ID=gene-IXO1088_021925;Name=IXO1088_021925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021925 CP040687.1 Protein Homology CDS 4470928 4471416 . + 0 ID=cds-QIE17367.1;Parent=gene-IXO1088_021925;Dbxref=NCBI_GP:QIE17367.1;Name=QIE17367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635829.1;locus_tag=IXO1088_021925;product=MarR family transcriptional regulator;protein_id=QIE17367.1;transl_table=11 CP040687.1 Genbank gene 4471773 4472363 . - . ID=gene-IXO1088_021930;Name=IXO1088_021930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021930 CP040687.1 Protein Homology CDS 4471773 4472363 . - 0 ID=cds-QIE17368.1;Parent=gene-IXO1088_021930;Dbxref=NCBI_GP:QIE17368.1;Name=QIE17368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635828.1;locus_tag=IXO1088_021930;product=thioredoxin family protein;protein_id=QIE17368.1;transl_table=11 CP040687.1 Genbank gene 4472375 4473883 . - . ID=gene-IXO1088_021935;Name=IXO1088_021935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021935 CP040687.1 Protein Homology CDS 4472375 4473883 . - 0 ID=cds-QIE17369.1;Parent=gene-IXO1088_021935;Dbxref=NCBI_GP:QIE17369.1;Name=QIE17369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301449.1;locus_tag=IXO1088_021935;product=MFS transporter;protein_id=QIE17369.1;transl_table=11 CP040687.1 Genbank gene 4474326 4475219 . - . ID=gene-IXO1088_021940;Name=IXO1088_021940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021940 CP040687.1 Protein Homology CDS 4474326 4475219 . - 0 ID=cds-QIE17370.1;Parent=gene-IXO1088_021940;Dbxref=NCBI_GP:QIE17370.1;Name=QIE17370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301448.1;locus_tag=IXO1088_021940;product=tryptophan 2%2C3-dioxygenase;protein_id=QIE17370.1;transl_table=11 CP040687.1 Genbank pseudogene 4475625 4476538 . + . ID=gene-IXO1088_021945;Name=IXO1088_021945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021945;pseudo=true CP040687.1 Protein Homology CDS 4475625 4476538 . + 0 ID=cds-IXO1088_021945;Parent=gene-IXO1088_021945;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635825.2;locus_tag=IXO1088_021945;product=nuclease;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4476565 4477230 . + . ID=gene-IXO1088_021950;Name=IXO1088_021950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021950 CP040687.1 Protein Homology CDS 4476565 4477230 . + 0 ID=cds-QIE17371.1;Parent=gene-IXO1088_021950;Dbxref=NCBI_GP:QIE17371.1;Name=QIE17371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260430.1;locus_tag=IXO1088_021950;product=pyruvate dehydrogenase E1 subunit alpha;protein_id=QIE17371.1;transl_table=11 CP040687.1 Genbank pseudogene 4477310 4477774 . + . ID=gene-IXO1088_021955;Name=IXO1088_021955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021955;pseudo=true CP040687.1 Protein Homology CDS 4477310 4477774 . + 0 ID=cds-IXO1088_021955;Parent=gene-IXO1088_021955;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635823.1;locus_tag=IXO1088_021955;product=alpha-ketoacid dehydrogenase subunit beta;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4477863 4478828 . + . ID=gene-IXO1088_021960;Name=IXO1088_021960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021960 CP040687.1 Protein Homology CDS 4477863 4478828 . + 0 ID=cds-QIE17372.1;Parent=gene-IXO1088_021960;Dbxref=NCBI_GP:QIE17372.1;Name=QIE17372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_021960;product=IS1595 family transposase;protein_id=QIE17372.1;transl_table=11 CP040687.1 Genbank pseudogene 4478835 4479359 . + . ID=gene-IXO1088_021965;Name=IXO1088_021965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021965;pseudo=true CP040687.1 Protein Homology CDS 4478835 4479359 . + 0 ID=cds-IXO1088_021965;Parent=gene-IXO1088_021965;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635823.1;locus_tag=IXO1088_021965;product=alpha-ketoacid dehydrogenase subunit beta;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4479361 4479741 . + . ID=gene-IXO1088_021970;Name=IXO1088_021970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021970 CP040687.1 Protein Homology CDS 4479361 4479741 . + 0 ID=cds-QIE17373.1;Parent=gene-IXO1088_021970;Dbxref=NCBI_GP:QIE17373.1;Name=QIE17373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260435.1;locus_tag=IXO1088_021970;product=peptide-binding protein;protein_id=QIE17373.1;transl_table=11 CP040687.1 Genbank pseudogene 4479746 4479855 . - . ID=gene-IXO1088_021975;Name=IXO1088_021975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_021975;pseudo=true CP040687.1 Protein Homology CDS 4479746 4479855 . - 0 ID=cds-IXO1088_021975;Parent=gene-IXO1088_021975;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558069.1;locus_tag=IXO1088_021975;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4479944 4480849 . - . ID=gene-IXO1088_021980;Name=IXO1088_021980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021980 CP040687.1 Protein Homology CDS 4479944 4480849 . - 0 ID=cds-QIE17374.1;Parent=gene-IXO1088_021980;Dbxref=NCBI_GP:QIE17374.1;Name=QIE17374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635588.1;locus_tag=IXO1088_021980;product=hypothetical protein;protein_id=QIE17374.1;transl_table=11 CP040687.1 Genbank gene 4480918 4482213 . + . ID=gene-IXO1088_021985;Name=IXO1088_021985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021985 CP040687.1 Protein Homology CDS 4480918 4482213 . + 0 ID=cds-QIE17375.1;Parent=gene-IXO1088_021985;Dbxref=NCBI_GP:QIE17375.1;Name=QIE17375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635589.1;locus_tag=IXO1088_021985;product=acetyl-CoA C-acetyltransferase;protein_id=QIE17375.1;transl_table=11 CP040687.1 Genbank gene 4482304 4482867 . + . ID=gene-IXO1088_021990;Name=IXO1088_021990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021990 CP040687.1 Protein Homology CDS 4482304 4482867 . + 0 ID=cds-QIE18114.1;Parent=gene-IXO1088_021990;Dbxref=NCBI_GP:QIE18114.1;Name=QIE18114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635590.1;locus_tag=IXO1088_021990;product=hypothetical protein;protein_id=QIE18114.1;transl_table=11 CP040687.1 Genbank gene 4483293 4484558 . - . ID=gene-IXO1088_021995;Name=IXO1088_021995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_021995 CP040687.1 Protein Homology CDS 4483293 4484558 . - 0 ID=cds-QIE17376.1;Parent=gene-IXO1088_021995;Dbxref=NCBI_GP:QIE17376.1;Name=QIE17376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112149.1;locus_tag=IXO1088_021995;product=heme biosynthesis protein HemY;protein_id=QIE17376.1;transl_table=11 CP040687.1 Genbank gene 4484555 4485532 . - . ID=gene-IXO1088_022000;Name=IXO1088_022000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022000 CP040687.1 Protein Homology CDS 4484555 4485532 . - 0 ID=cds-QIE17377.1;Parent=gene-IXO1088_022000;Dbxref=NCBI_GP:QIE17377.1;Name=QIE17377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635592.1;locus_tag=IXO1088_022000;product=hypothetical protein;protein_id=QIE17377.1;transl_table=11 CP040687.1 Genbank gene 4485636 4486439 . - . ID=gene-IXO1088_022005;Name=IXO1088_022005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022005 CP040687.1 Protein Homology CDS 4485636 4486439 . - 0 ID=cds-QIE17378.1;Parent=gene-IXO1088_022005;Dbxref=NCBI_GP:QIE17378.1;Name=QIE17378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444011.1;locus_tag=IXO1088_022005;product=uroporphyrinogen-III synthase;protein_id=QIE17378.1;transl_table=11 CP040687.1 Genbank gene 4486615 4487424 . + . ID=gene-IXO1088_022010;Name=IXO1088_022010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022010 CP040687.1 Protein Homology CDS 4486615 4487424 . + 0 ID=cds-QIE17379.1;Parent=gene-IXO1088_022010;Dbxref=NCBI_GP:QIE17379.1;Name=QIE17379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635594.1;locus_tag=IXO1088_022010;product=glycosyltransferase family 25 protein;protein_id=QIE17379.1;transl_table=11 CP040687.1 Genbank gene 4487432 4488230 . - . ID=gene-IXO1088_022015;Name=IXO1088_022015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022015 CP040687.1 Protein Homology CDS 4487959 4488230 . - 0 ID=cds-QIE17380.1;Parent=gene-IXO1088_022015;Dbxref=NCBI_GP:QIE17380.1;Name=QIE17380.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_022015;product=IS5 family transposase;protein_id=QIE17380.1;transl_table=11 CP040687.1 Protein Homology CDS 4487432 4487960 . - 1 ID=cds-QIE17380.1;Parent=gene-IXO1088_022015;Dbxref=NCBI_GP:QIE17380.1;Name=QIE17380.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_022015;product=IS5 family transposase;protein_id=QIE17380.1;transl_table=11 CP040687.1 Genbank gene 4488273 4488920 . - . ID=gene-IXO1088_022020;Name=IXO1088_022020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022020 CP040687.1 Protein Homology CDS 4488273 4488920 . - 0 ID=cds-QIE17381.1;Parent=gene-IXO1088_022020;Dbxref=NCBI_GP:QIE17381.1;Name=QIE17381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639139.1;locus_tag=IXO1088_022020;product=hypothetical protein;protein_id=QIE17381.1;transl_table=11 CP040687.1 Genbank gene 4489015 4489590 . - . ID=gene-IXO1088_022025;Name=IXO1088_022025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022025 CP040687.1 Protein Homology CDS 4489015 4489590 . - 0 ID=cds-QIE17382.1;Parent=gene-IXO1088_022025;Dbxref=NCBI_GP:QIE17382.1;Name=QIE17382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157015.1;locus_tag=IXO1088_022025;product=hypothetical protein;protein_id=QIE17382.1;transl_table=11 CP040687.1 Genbank gene 4489728 4490477 . - . ID=gene-IXO1088_022030;Name=IXO1088_022030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022030 CP040687.1 Protein Homology CDS 4489728 4490477 . - 0 ID=cds-QIE17383.1;Parent=gene-IXO1088_022030;Dbxref=NCBI_GP:QIE17383.1;Name=QIE17383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639141.1;locus_tag=IXO1088_022030;product=HAD family hydrolase;protein_id=QIE17383.1;transl_table=11 CP040687.1 Genbank gene 4490515 4490955 . - . ID=gene-IXO1088_022035;Name=IXO1088_022035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022035 CP040687.1 Protein Homology CDS 4490515 4490955 . - 0 ID=cds-QIE17384.1;Parent=gene-IXO1088_022035;Dbxref=NCBI_GP:QIE17384.1;Name=QIE17384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302268.1;locus_tag=IXO1088_022035;product=EF-hand domain-containing protein;protein_id=QIE17384.1;transl_table=11 CP040687.1 Genbank gene 4490870 4491094 . + . ID=gene-IXO1088_022040;Name=IXO1088_022040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022040 CP040687.1 Protein Homology CDS 4490870 4491094 . + 0 ID=cds-QIE17385.1;Parent=gene-IXO1088_022040;Dbxref=NCBI_GP:QIE17385.1;Name=QIE17385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159371.1;locus_tag=IXO1088_022040;product=hypothetical protein;protein_id=QIE17385.1;transl_table=11 CP040687.1 Genbank gene 4491162 4491503 . - . ID=gene-IXO1088_022045;Name=IXO1088_022045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022045 CP040687.1 Protein Homology CDS 4491162 4491503 . - 0 ID=cds-QIE17386.1;Parent=gene-IXO1088_022045;Dbxref=NCBI_GP:QIE17386.1;Name=QIE17386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302269.1;locus_tag=IXO1088_022045;product=EF-hand domain-containing protein;protein_id=QIE17386.1;transl_table=11 CP040687.1 Genbank gene 4491729 4492106 . - . ID=gene-IXO1088_022050;Name=IXO1088_022050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022050 CP040687.1 Protein Homology CDS 4491729 4492106 . - 0 ID=cds-QIE17387.1;Parent=gene-IXO1088_022050;Dbxref=NCBI_GP:QIE17387.1;Name=QIE17387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639144.1;locus_tag=IXO1088_022050;product=hypothetical protein;protein_id=QIE17387.1;transl_table=11 CP040687.1 Genbank gene 4492317 4492514 . - . ID=gene-IXO1088_022055;Name=IXO1088_022055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022055 CP040687.1 Protein Homology CDS 4492317 4492514 . - 0 ID=cds-QIE17388.1;Parent=gene-IXO1088_022055;Dbxref=NCBI_GP:QIE17388.1;Name=QIE17388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639145.2;locus_tag=IXO1088_022055;product=CPXCG motif-containing cysteine-rich protein;protein_id=QIE17388.1;transl_table=11 CP040687.1 Genbank gene 4492821 4493567 . - . ID=gene-IXO1088_022060;Name=IXO1088_022060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022060 CP040687.1 Protein Homology CDS 4492821 4493567 . - 0 ID=cds-QIE17389.1;Parent=gene-IXO1088_022060;Dbxref=NCBI_GP:QIE17389.1;Name=QIE17389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444006.1;locus_tag=IXO1088_022060;product=D-alanyl-D-alanine dipeptidase;protein_id=QIE17389.1;transl_table=11 CP040687.1 Genbank gene 4493660 4494466 . - . ID=gene-IXO1088_022065;Name=IXO1088_022065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022065 CP040687.1 Protein Homology CDS 4493660 4494466 . - 0 ID=cds-QIE17390.1;Parent=gene-IXO1088_022065;Dbxref=NCBI_GP:QIE17390.1;Name=QIE17390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117640.1;locus_tag=IXO1088_022065;product=N-acetylmuramoyl-L-alanine amidase;protein_id=QIE17390.1;transl_table=11 CP040687.1 Genbank gene 4494690 4496102 . + . ID=gene-IXO1088_022070;Name=IXO1088_022070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022070 CP040687.1 Protein Homology CDS 4494690 4496102 . + 0 ID=cds-QIE17391.1;Parent=gene-IXO1088_022070;Dbxref=NCBI_GP:QIE17391.1;Name=QIE17391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501731.1;locus_tag=IXO1088_022070;product=NlpC-P60 family protein;protein_id=QIE17391.1;transl_table=11 CP040687.1 Genbank gene 4496099 4497196 . + . ID=gene-IXO1088_022075;Name=IXO1088_022075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022075 CP040687.1 Protein Homology CDS 4496099 4497196 . + 0 ID=cds-QIE17392.1;Parent=gene-IXO1088_022075;Dbxref=NCBI_GP:QIE17392.1;Name=QIE17392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005987897.1;locus_tag=IXO1088_022075;product=dipeptide epimerase;protein_id=QIE17392.1;transl_table=11 CP040687.1 Genbank gene 4497201 4497277 . - . ID=gene-IXO1088_022080;Name=IXO1088_022080;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_022080 CP040687.1 cmsearch ncRNA 4497201 4497277 . - . ID=rna-IXO1088_022080;Parent=gene-IXO1088_022080;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_022080;product=sX9 sRNA CP040687.1 cmsearch exon 4497201 4497277 . - . ID=exon-IXO1088_022080-1;Parent=rna-IXO1088_022080;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_022080;product=sX9 sRNA CP040687.1 Genbank gene 4497351 4498149 . - . ID=gene-IXO1088_022085;Name=IXO1088_022085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022085 CP040687.1 Protein Homology CDS 4497878 4498149 . - 0 ID=cds-QIE17393.1;Parent=gene-IXO1088_022085;Dbxref=NCBI_GP:QIE17393.1;Name=QIE17393.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_022085;product=IS5 family transposase;protein_id=QIE17393.1;transl_table=11 CP040687.1 Protein Homology CDS 4497351 4497879 . - 1 ID=cds-QIE17393.1;Parent=gene-IXO1088_022085;Dbxref=NCBI_GP:QIE17393.1;Name=QIE17393.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_022085;product=IS5 family transposase;protein_id=QIE17393.1;transl_table=11 CP040687.1 Genbank gene 4498369 4499331 . + . ID=gene-IXO1088_022090;Name=IXO1088_022090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022090 CP040687.1 Protein Homology CDS 4498369 4499331 . + 0 ID=cds-QIE17394.1;Parent=gene-IXO1088_022090;Dbxref=NCBI_GP:QIE17394.1;Name=QIE17394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1088_022090;product=IS1595-like element ISXo2 family transposase;protein_id=QIE17394.1;transl_table=11 CP040687.1 Genbank pseudogene 4499607 4499819 . + . ID=gene-IXO1088_022095;Name=IXO1088_022095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022095;pseudo=true CP040687.1 Protein Homology CDS 4499607 4499819 . + 0 ID=cds-IXO1088_022095;Parent=gene-IXO1088_022095;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304579.1;locus_tag=IXO1088_022095;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4500008 4500784 . + . ID=gene-IXO1088_022100;Name=IXO1088_022100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022100 CP040687.1 Protein Homology CDS 4500008 4500784 . + 0 ID=cds-QIE17395.1;Parent=gene-IXO1088_022100;Dbxref=NCBI_GP:QIE17395.1;Name=QIE17395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157008.1;locus_tag=IXO1088_022100;product=hypothetical protein;protein_id=QIE17395.1;transl_table=11 CP040687.1 Genbank gene 4500781 4502097 . + . ID=gene-IXO1088_022105;Name=IXO1088_022105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022105 CP040687.1 Protein Homology CDS 4500781 4502097 . + 0 ID=cds-QIE17396.1;Parent=gene-IXO1088_022105;Dbxref=NCBI_GP:QIE17396.1;Name=QIE17396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409554.1;locus_tag=IXO1088_022105;product=amino acid permease;protein_id=QIE17396.1;transl_table=11 CP040687.1 Genbank gene 4502156 4502919 . - . ID=gene-IXO1088_022110;Name=IXO1088_022110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022110 CP040687.1 Protein Homology CDS 4502604 4502919 . - 0 ID=cds-QIE17397.1;Parent=gene-IXO1088_022110;Dbxref=NCBI_GP:QIE17397.1;Name=QIE17397.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_022110;product=IS5 family transposase;protein_id=QIE17397.1;transl_table=11 CP040687.1 Protein Homology CDS 4502156 4502604 . - 2 ID=cds-QIE17397.1;Parent=gene-IXO1088_022110;Dbxref=NCBI_GP:QIE17397.1;Name=QIE17397.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_022110;product=IS5 family transposase;protein_id=QIE17397.1;transl_table=11 CP040687.1 Genbank gene 4502982 4503057 . - . ID=gene-IXO1088_022115;Name=IXO1088_022115;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_022115 CP040687.1 cmsearch ncRNA 4502982 4503057 . - . ID=rna-IXO1088_022115;Parent=gene-IXO1088_022115;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_022115;product=sX9 sRNA CP040687.1 cmsearch exon 4502982 4503057 . - . ID=exon-IXO1088_022115-1;Parent=rna-IXO1088_022115;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_022115;product=sX9 sRNA CP040687.1 Genbank gene 4503123 4503404 . + . ID=gene-IXO1088_022120;Name=IXO1088_022120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022120 CP040687.1 Protein Homology CDS 4503123 4503404 . + 0 ID=cds-QIE17398.1;Parent=gene-IXO1088_022120;Dbxref=NCBI_GP:QIE17398.1;Name=QIE17398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303298.1;locus_tag=IXO1088_022120;product=hypothetical protein;protein_id=QIE17398.1;transl_table=11 CP040687.1 Genbank pseudogene 4503577 4503910 . + . ID=gene-IXO1088_022125;Name=IXO1088_022125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022125;pseudo=true CP040687.1 Protein Homology CDS 4503577 4503910 . + 0 ID=cds-IXO1088_022125;Parent=gene-IXO1088_022125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348827.1;locus_tag=IXO1088_022125;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4503965 4504399 . - . ID=gene-IXO1088_022130;Name=IXO1088_022130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022130 CP040687.1 Protein Homology CDS 4503965 4504399 . - 0 ID=cds-QIE17399.1;Parent=gene-IXO1088_022130;Dbxref=NCBI_GP:QIE17399.1;Name=QIE17399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501725.1;locus_tag=IXO1088_022130;product=hypothetical protein;protein_id=QIE17399.1;transl_table=11 CP040687.1 Genbank gene 4504574 4505752 . + . ID=gene-IXO1088_022135;Name=IXO1088_022135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022135 CP040687.1 Protein Homology CDS 4504574 4505752 . + 0 ID=cds-QIE17400.1;Parent=gene-IXO1088_022135;Dbxref=NCBI_GP:QIE17400.1;Name=QIE17400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639158.1;locus_tag=IXO1088_022135;product=PQQ-dependent sugar dehydrogenase;protein_id=QIE17400.1;transl_table=11 CP040687.1 Genbank gene 4505749 4506114 . + . ID=gene-IXO1088_022140;Name=IXO1088_022140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022140 CP040687.1 Protein Homology CDS 4505749 4506114 . + 0 ID=cds-QIE17401.1;Parent=gene-IXO1088_022140;Dbxref=NCBI_GP:QIE17401.1;Name=QIE17401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502012.1;locus_tag=IXO1088_022140;product=hypothetical protein;protein_id=QIE17401.1;transl_table=11 CP040687.1 Genbank pseudogene 4506135 4506656 . + . ID=gene-IXO1088_022145;Name=IXO1088_022145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022145;pseudo=true CP040687.1 Protein Homology CDS 4506135 4506656 . + 0 ID=cds-IXO1088_022145;Parent=gene-IXO1088_022145;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408304.1;locus_tag=IXO1088_022145;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4506748 4507710 . + . ID=gene-IXO1088_022150;Name=IXO1088_022150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022150 CP040687.1 Protein Homology CDS 4506748 4507710 . + 0 ID=cds-QIE17402.1;Parent=gene-IXO1088_022150;Dbxref=NCBI_GP:QIE17402.1;Name=QIE17402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1088_022150;product=IS1595 family transposase;protein_id=QIE17402.1;transl_table=11 CP040687.1 Genbank pseudogene 4507734 4508273 . + . ID=gene-IXO1088_022155;Name=IXO1088_022155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022155;pseudo=true CP040687.1 Protein Homology CDS 4507734 4508273 . + 0 ID=cds-IXO1088_022155;Parent=gene-IXO1088_022155;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011238416.1;locus_tag=IXO1088_022155;product=IS630 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4508490 4509452 . + . ID=gene-IXO1088_022160;Name=IXO1088_022160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022160 CP040687.1 Protein Homology CDS 4508490 4509452 . + 0 ID=cds-QIE17403.1;Parent=gene-IXO1088_022160;Dbxref=NCBI_GP:QIE17403.1;Name=QIE17403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1088_022160;product=IS1595-like element ISXo2 family transposase;protein_id=QIE17403.1;transl_table=11 CP040687.1 Genbank pseudogene 4509530 4509853 . + . ID=gene-IXO1088_022165;Name=IXO1088_022165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022165;pseudo=true CP040687.1 Protein Homology CDS 4509530 4509853 . + 0 ID=cds-IXO1088_022165;Parent=gene-IXO1088_022165;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_022165;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4509869 4511104 . - . ID=gene-IXO1088_022170;Name=IXO1088_022170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022170 CP040687.1 Protein Homology CDS 4509869 4511104 . - 0 ID=cds-QIE17404.1;Parent=gene-IXO1088_022170;Dbxref=NCBI_GP:QIE17404.1;Name=QIE17404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1088_022170;product=ISL3-like element ISXoo13 family transposase;protein_id=QIE17404.1;transl_table=11 CP040687.1 Genbank pseudogene 4511167 4511613 . + . ID=gene-IXO1088_022175;Name=IXO1088_022175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022175;pseudo=true CP040687.1 Protein Homology CDS 4511167 4511613 . + 0 ID=cds-IXO1088_022175;Parent=gene-IXO1088_022175;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_022175;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4511620 4512585 . - . ID=gene-IXO1088_022180;Name=IXO1088_022180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022180 CP040687.1 Protein Homology CDS 4511620 4512585 . - 0 ID=cds-QIE17405.1;Parent=gene-IXO1088_022180;Dbxref=NCBI_GP:QIE17405.1;Name=QIE17405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_022180;product=IS1595-like element ISXo5 family transposase;protein_id=QIE17405.1;transl_table=11 CP040687.1 Genbank pseudogene 4512675 4513118 . + . ID=gene-IXO1088_022185;Name=IXO1088_022185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022185;pseudo=true CP040687.1 Protein Homology CDS 4512675 4513118 . + 0 ID=cds-IXO1088_022185;Parent=gene-IXO1088_022185;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407232.1;locus_tag=IXO1088_022185;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4513248 4515419 . - . ID=gene-IXO1088_022190;Name=IXO1088_022190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022190 CP040687.1 Protein Homology CDS 4513248 4515419 . - 0 ID=cds-QIE17406.1;Parent=gene-IXO1088_022190;Dbxref=NCBI_GP:QIE17406.1;Name=QIE17406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639159.1;locus_tag=IXO1088_022190;product=beta-glucosidase;protein_id=QIE17406.1;transl_table=11 CP040687.1 Genbank gene 4515647 4516003 . - . ID=gene-IXO1088_022195;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=IXO1088_022195 CP040687.1 Protein Homology CDS 4515647 4516003 . - 0 ID=cds-QIE17407.1;Parent=gene-IXO1088_022195;Dbxref=NCBI_GP:QIE17407.1;Name=QIE17407.1;gbkey=CDS;gene=folB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007973559.1;locus_tag=IXO1088_022195;product=dihydroneopterin aldolase;protein_id=QIE17407.1;transl_table=11 CP040687.1 Genbank gene 4516082 4517146 . - . ID=gene-IXO1088_022200;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=IXO1088_022200 CP040687.1 Protein Homology CDS 4516082 4517146 . - 0 ID=cds-QIE17408.1;Parent=gene-IXO1088_022200;Dbxref=NCBI_GP:QIE17408.1;Name=QIE17408.1;gbkey=CDS;gene=tsaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501720.1;locus_tag=IXO1088_022200;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=QIE17408.1;transl_table=11 CP040687.1 Genbank gene 4517426 4517641 . + . ID=gene-IXO1088_022205;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=IXO1088_022205 CP040687.1 Protein Homology CDS 4517426 4517641 . + 0 ID=cds-QIE17409.1;Parent=gene-IXO1088_022205;Dbxref=NCBI_GP:QIE17409.1;Name=QIE17409.1;gbkey=CDS;gene=rpsU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002808376.1;locus_tag=IXO1088_022205;product=30S ribosomal protein S21;protein_id=QIE17409.1;transl_table=11 CP040687.1 Genbank gene 4517949 4518395 . + . ID=gene-IXO1088_022210;Name=IXO1088_022210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022210 CP040687.1 Protein Homology CDS 4517949 4518395 . + 0 ID=cds-QIE17410.1;Parent=gene-IXO1088_022210;Dbxref=NCBI_GP:QIE17410.1;Name=QIE17410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639163.1;locus_tag=IXO1088_022210;product=GatB/YqeY domain-containing protein;protein_id=QIE17410.1;transl_table=11 CP040687.1 Genbank gene 4519163 4519926 . - . ID=gene-IXO1088_022215;Name=IXO1088_022215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022215 CP040687.1 Protein Homology CDS 4519611 4519926 . - 0 ID=cds-QIE17411.1;Parent=gene-IXO1088_022215;Dbxref=NCBI_GP:QIE17411.1;Name=QIE17411.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_022215;product=IS5 family transposase;protein_id=QIE17411.1;transl_table=11 CP040687.1 Protein Homology CDS 4519163 4519611 . - 2 ID=cds-QIE17411.1;Parent=gene-IXO1088_022215;Dbxref=NCBI_GP:QIE17411.1;Name=QIE17411.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_022215;product=IS5 family transposase;protein_id=QIE17411.1;transl_table=11 CP040687.1 Genbank gene 4520041 4520116 . + . ID=gene-IXO1088_022220;Name=IXO1088_022220;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_022220 CP040687.1 cmsearch ncRNA 4520041 4520116 . + . ID=rna-IXO1088_022220;Parent=gene-IXO1088_022220;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_022220;product=sX9 sRNA CP040687.1 cmsearch exon 4520041 4520116 . + . ID=exon-IXO1088_022220-1;Parent=rna-IXO1088_022220;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_022220;product=sX9 sRNA CP040687.1 Genbank pseudogene 4520207 4520362 . + . ID=gene-IXO1088_022225;Name=IXO1088_022225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022225;pseudo=true CP040687.1 Protein Homology CDS 4520207 4520362 . + 0 ID=cds-IXO1088_022225;Parent=gene-IXO1088_022225;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258951.1;locus_tag=IXO1088_022225;product=pectate lyase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4520689 4521651 . + . ID=gene-IXO1088_022230;Name=IXO1088_022230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022230 CP040687.1 Protein Homology CDS 4520689 4521651 . + 0 ID=cds-QIE17412.1;Parent=gene-IXO1088_022230;Dbxref=NCBI_GP:QIE17412.1;Name=QIE17412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501718.1;locus_tag=IXO1088_022230;product=YihY/virulence factor BrkB family protein;protein_id=QIE17412.1;transl_table=11 CP040687.1 Genbank gene 4521741 4523489 . + . ID=gene-IXO1088_022235;Name=IXO1088_022235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022235 CP040687.1 Protein Homology CDS 4521741 4523489 . + 0 ID=cds-QIE17413.1;Parent=gene-IXO1088_022235;Dbxref=NCBI_GP:QIE17413.1;Name=QIE17413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639165.1;locus_tag=IXO1088_022235;product=DNA primase;protein_id=QIE17413.1;transl_table=11 CP040687.1 Genbank gene 4523741 4525060 . - . ID=gene-IXO1088_022240;Name=IXO1088_022240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022240 CP040687.1 Protein Homology CDS 4523741 4525060 . - 0 ID=cds-QIE17414.1;Parent=gene-IXO1088_022240;Dbxref=NCBI_GP:QIE17414.1;Name=QIE17414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_022240;product=IS701 family transposase;protein_id=QIE17414.1;transl_table=11 CP040687.1 Genbank gene 4525521 4525835 . + . ID=gene-IXO1088_022245;Name=IXO1088_022245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022245 CP040687.1 Protein Homology CDS 4525521 4525835 . + 0 ID=cds-QIE17415.1;Parent=gene-IXO1088_022245;Dbxref=NCBI_GP:QIE17415.1;Name=QIE17415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003479375.1;locus_tag=IXO1088_022245;product=YkgJ family cysteine cluster protein;protein_id=QIE17415.1;transl_table=11 CP040687.1 Genbank gene 4525845 4526066 . + . ID=gene-IXO1088_022250;Name=IXO1088_022250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022250 CP040687.1 Protein Homology CDS 4525845 4526066 . + 0 ID=cds-QIE17416.1;Parent=gene-IXO1088_022250;Dbxref=NCBI_GP:QIE17416.1;Name=QIE17416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365365.1;locus_tag=IXO1088_022250;product=hypothetical protein;protein_id=QIE17416.1;transl_table=11 CP040687.1 Genbank gene 4526487 4526699 . - . ID=gene-IXO1088_022255;Name=IXO1088_022255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022255 CP040687.1 Protein Homology CDS 4526487 4526699 . - 0 ID=cds-QIE17417.1;Parent=gene-IXO1088_022255;Dbxref=NCBI_GP:QIE17417.1;Name=QIE17417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639054.1;locus_tag=IXO1088_022255;product=hypothetical protein;protein_id=QIE17417.1;transl_table=11 CP040687.1 Genbank gene 4527026 4527775 . + . ID=gene-IXO1088_022260;Name=IXO1088_022260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022260 CP040687.1 Protein Homology CDS 4527026 4527775 . + 0 ID=cds-QIE17418.1;Parent=gene-IXO1088_022260;Dbxref=NCBI_GP:QIE17418.1;Name=QIE17418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639056.1;locus_tag=IXO1088_022260;product=DUF3348 domain-containing protein;protein_id=QIE17418.1;transl_table=11 CP040687.1 Genbank gene 4527786 4530443 . + . ID=gene-IXO1088_022265;Name=IXO1088_022265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022265 CP040687.1 Protein Homology CDS 4527786 4530443 . + 0 ID=cds-QIE17419.1;Parent=gene-IXO1088_022265;Dbxref=NCBI_GP:QIE17419.1;Name=QIE17419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407521.1;locus_tag=IXO1088_022265;product=DUF802 domain-containing protein;protein_id=QIE17419.1;transl_table=11 CP040687.1 Genbank gene 4530440 4531114 . + . ID=gene-IXO1088_022270;Name=IXO1088_022270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022270 CP040687.1 Protein Homology CDS 4530440 4531114 . + 0 ID=cds-QIE17420.1;Parent=gene-IXO1088_022270;Dbxref=NCBI_GP:QIE17420.1;Name=QIE17420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911315.1;locus_tag=IXO1088_022270;product=hypothetical protein;protein_id=QIE17420.1;transl_table=11 CP040687.1 Genbank gene 4531111 4531776 . + . ID=gene-IXO1088_022275;Name=IXO1088_022275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022275 CP040687.1 Protein Homology CDS 4531111 4531776 . + 0 ID=cds-QIE17421.1;Parent=gene-IXO1088_022275;Dbxref=NCBI_GP:QIE17421.1;Name=QIE17421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257530.1;locus_tag=IXO1088_022275;product=DUF2894 domain-containing protein;protein_id=QIE17421.1;transl_table=11 CP040687.1 Genbank gene 4531978 4532946 . - . ID=gene-IXO1088_022280;Name=IXO1088_022280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022280 CP040687.1 Protein Homology CDS 4531978 4532946 . - 0 ID=cds-QIE17422.1;Parent=gene-IXO1088_022280;Dbxref=NCBI_GP:QIE17422.1;Name=QIE17422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_022280;product=IS5-like element ISXo1 family transposase;protein_id=QIE17422.1;transl_table=11 CP040687.1 Genbank gene 4533021 4535162 . - . ID=gene-IXO1088_022285;Name=IXO1088_022285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022285 CP040687.1 Protein Homology CDS 4533021 4535162 . - 0 ID=cds-QIE17423.1;Parent=gene-IXO1088_022285;Dbxref=NCBI_GP:QIE17423.1;Name=QIE17423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379725.1;locus_tag=IXO1088_022285;product=TonB-dependent siderophore receptor;protein_id=QIE17423.1;transl_table=11 CP040687.1 Genbank gene 4535252 4536520 . - . ID=gene-IXO1088_022290;Name=IXO1088_022290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022290 CP040687.1 Protein Homology CDS 4535252 4536520 . - 0 ID=cds-QIE17424.1;Parent=gene-IXO1088_022290;Dbxref=NCBI_GP:QIE17424.1;Name=QIE17424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639061.1;locus_tag=IXO1088_022290;product=DUF3526 domain-containing protein;protein_id=QIE17424.1;transl_table=11 CP040687.1 Genbank gene 4536520 4537956 . - . ID=gene-IXO1088_022295;Name=IXO1088_022295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022295 CP040687.1 Protein Homology CDS 4536520 4537956 . - 0 ID=cds-QIE17425.1;Parent=gene-IXO1088_022295;Dbxref=NCBI_GP:QIE17425.1;Name=QIE17425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016900947.1;locus_tag=IXO1088_022295;product=DUF3526 domain-containing protein;protein_id=QIE17425.1;transl_table=11 CP040687.1 Genbank gene 4537967 4538689 . - . ID=gene-IXO1088_022300;Name=IXO1088_022300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022300 CP040687.1 Protein Homology CDS 4537967 4538689 . - 0 ID=cds-QIE17426.1;Parent=gene-IXO1088_022300;Dbxref=NCBI_GP:QIE17426.1;Name=QIE17426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489275.1;locus_tag=IXO1088_022300;product=ABC transporter ATP-binding protein;protein_id=QIE17426.1;transl_table=11 CP040687.1 Genbank pseudogene 4538919 4539208 . - . ID=gene-IXO1088_022305;Name=IXO1088_022305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022305;pseudo=true CP040687.1 Protein Homology CDS 4538919 4539208 . - 0 ID=cds-IXO1088_022305;Parent=gene-IXO1088_022305;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612184.1;locus_tag=IXO1088_022305;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4539262 4539834 . + . ID=gene-IXO1088_022310;Name=IXO1088_022310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022310;pseudo=true CP040687.1 Protein Homology CDS 4539262 4539834 . + 0 ID=cds-IXO1088_022310;Parent=gene-IXO1088_022310;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407232.1;locus_tag=IXO1088_022310;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4539928 4540893 . + . ID=gene-IXO1088_022315;Name=IXO1088_022315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022315 CP040687.1 Protein Homology CDS 4539928 4540893 . + 0 ID=cds-QIE17427.1;Parent=gene-IXO1088_022315;Dbxref=NCBI_GP:QIE17427.1;Name=QIE17427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_022315;product=IS1595-like element ISXo5 family transposase;protein_id=QIE17427.1;transl_table=11 CP040687.1 Genbank gene 4540929 4541885 . - . ID=gene-IXO1088_022320;Name=IXO1088_022320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022320 CP040687.1 Protein Homology CDS 4540929 4541885 . - 0 ID=cds-QIE17428.1;Parent=gene-IXO1088_022320;Dbxref=NCBI_GP:QIE17428.1;Name=QIE17428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1088_022320;product=IS30-like element IS1112b family transposase;protein_id=QIE17428.1;transl_table=11 CP040687.1 Genbank gene 4541879 4542184 . + . ID=gene-IXO1088_022325;Name=IXO1088_022325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022325 CP040687.1 Protein Homology CDS 4541879 4542184 . + 0 ID=cds-QIE17429.1;Parent=gene-IXO1088_022325;Dbxref=NCBI_GP:QIE17429.1;Name=QIE17429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259478.1;locus_tag=IXO1088_022325;product=hypothetical protein;protein_id=QIE17429.1;transl_table=11 CP040687.1 Genbank gene 4542213 4543010 . - . ID=gene-IXO1088_022330;Name=IXO1088_022330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022330 CP040687.1 Protein Homology CDS 4542213 4543010 . - 0 ID=cds-QIE17430.1;Parent=gene-IXO1088_022330;Dbxref=NCBI_GP:QIE17430.1;Name=QIE17430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017940248.1;locus_tag=IXO1088_022330;product=endonuclease;protein_id=QIE17430.1;transl_table=11 CP040687.1 Genbank gene 4543007 4544281 . - . ID=gene-IXO1088_022335;Name=IXO1088_022335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022335 CP040687.1 Protein Homology CDS 4543007 4544281 . - 0 ID=cds-QIE17431.1;Parent=gene-IXO1088_022335;Dbxref=NCBI_GP:QIE17431.1;Name=QIE17431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015160339.1;locus_tag=IXO1088_022335;product=DNA cytosine methyltransferase;protein_id=QIE17431.1;transl_table=11 CP040687.1 Genbank gene 4544362 4544772 . - . ID=gene-IXO1088_022340;Name=vsr;gbkey=Gene;gene=vsr;gene_biotype=protein_coding;locus_tag=IXO1088_022340 CP040687.1 Protein Homology CDS 4544362 4544772 . - 0 ID=cds-QIE17432.1;Parent=gene-IXO1088_022340;Dbxref=NCBI_GP:QIE17432.1;Name=QIE17432.1;gbkey=CDS;gene=vsr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257516.1;locus_tag=IXO1088_022340;product=DNA mismatch endonuclease Vsr;protein_id=QIE17432.1;transl_table=11 CP040687.1 Genbank pseudogene 4544876 4545436 . - . ID=gene-IXO1088_022345;Name=IXO1088_022345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022345;pseudo=true CP040687.1 Protein Homology CDS 4544876 4545436 . - 0 ID=cds-IXO1088_022345;Parent=gene-IXO1088_022345;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_006896735.1;locus_tag=IXO1088_022345;product=MobC family plasmid mobilization relaxosome protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4545507 4545811 . - . ID=gene-IXO1088_022350;Name=IXO1088_022350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022350;pseudo=true CP040687.1 Protein Homology CDS 4545507 4545811 . - 0 ID=cds-IXO1088_022350;Parent=gene-IXO1088_022350;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_006896736.1;locus_tag=IXO1088_022350;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4545849 4545986 . - . ID=gene-IXO1088_022355;Name=IXO1088_022355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022355;pseudo=true CP040687.1 Protein Homology CDS 4545849 4545986 . - 0 ID=cds-IXO1088_022355;Parent=gene-IXO1088_022355;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_006896737.1;locus_tag=IXO1088_022355;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4546085 4546243 . - . ID=gene-IXO1088_022360;Name=IXO1088_022360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022360 CP040687.1 Protein Homology CDS 4546085 4546243 . - 0 ID=cds-QIE17433.1;Parent=gene-IXO1088_022360;Dbxref=NCBI_GP:QIE17433.1;Name=QIE17433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_006896738.1;locus_tag=IXO1088_022360;product=hypothetical protein;protein_id=QIE17433.1;transl_table=11 CP040687.1 Genbank gene 4546240 4546542 . - . ID=gene-IXO1088_022365;Name=IXO1088_022365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022365 CP040687.1 Protein Homology CDS 4546240 4546542 . - 0 ID=cds-QIE17434.1;Parent=gene-IXO1088_022365;Dbxref=NCBI_GP:QIE17434.1;Name=QIE17434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_006896739.1;locus_tag=IXO1088_022365;product=hypothetical protein;protein_id=QIE17434.1;transl_table=11 CP040687.1 Genbank gene 4546549 4547634 . - . ID=gene-IXO1088_022370;Name=IXO1088_022370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022370 CP040687.1 Protein Homology CDS 4546549 4547634 . - 0 ID=cds-QIE17435.1;Parent=gene-IXO1088_022370;Dbxref=NCBI_GP:QIE17435.1;Name=QIE17435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_006896740.1;locus_tag=IXO1088_022370;product=type IV secretion system protein;protein_id=QIE17435.1;transl_table=11 CP040687.1 Genbank gene 4547636 4547896 . - . ID=gene-IXO1088_022375;Name=IXO1088_022375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022375 CP040687.1 Protein Homology CDS 4547636 4547896 . - 0 ID=cds-QIE17436.1;Parent=gene-IXO1088_022375;Dbxref=NCBI_GP:QIE17436.1;Name=QIE17436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_006896741.1;locus_tag=IXO1088_022375;product=hypothetical protein;protein_id=QIE17436.1;transl_table=11 CP040687.1 Genbank gene 4547893 4548372 . - . ID=gene-IXO1088_022380;Name=IXO1088_022380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022380 CP040687.1 Protein Homology CDS 4547893 4548372 . - 0 ID=cds-QIE17437.1;Parent=gene-IXO1088_022380;Dbxref=NCBI_GP:QIE17437.1;Name=QIE17437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_006896742.1;locus_tag=IXO1088_022380;product=hypothetical protein;protein_id=QIE17437.1;transl_table=11 CP040687.1 Genbank gene 4548386 4549105 . - . ID=gene-IXO1088_022385;Name=virB5;gbkey=Gene;gene=virB5;gene_biotype=protein_coding;locus_tag=IXO1088_022385 CP040687.1 Protein Homology CDS 4548386 4549105 . - 0 ID=cds-QIE17438.1;Parent=gene-IXO1088_022385;Dbxref=NCBI_GP:QIE17438.1;Name=QIE17438.1;gbkey=CDS;gene=virB5;inference=COORDINATES: similar to AA sequence:RefSeq:YP_006896743.1;locus_tag=IXO1088_022385;product=P-type DNA transfer protein VirB5;protein_id=QIE17438.1;transl_table=11 CP040687.1 Genbank pseudogene 4549456 4549737 . - . ID=gene-IXO1088_022390;Name=IXO1088_022390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022390;pseudo=true CP040687.1 Protein Homology CDS 4549456 4549737 . - 0 ID=cds-IXO1088_022390;Parent=gene-IXO1088_022390;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449364.1;locus_tag=IXO1088_022390;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4549807 4551021 . + . ID=gene-IXO1088_022395;Name=IXO1088_022395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022395 CP040687.1 Protein Homology CDS 4549807 4551021 . + 0 ID=cds-QIE17439.1;Parent=gene-IXO1088_022395;Dbxref=NCBI_GP:QIE17439.1;Name=QIE17439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1088_022395;product=IS4-like element ISXo14 family transposase;protein_id=QIE17439.1;transl_table=11 CP040687.1 Genbank gene 4551097 4551936 . - . ID=gene-IXO1088_022400;Name=IXO1088_022400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022400 CP040687.1 Protein Homology CDS 4551097 4551936 . - 0 ID=cds-QIE17440.1;Parent=gene-IXO1088_022400;Dbxref=NCBI_GP:QIE17440.1;Name=QIE17440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_006896745.1;locus_tag=IXO1088_022400;product=helix-turn-helix domain-containing protein;protein_id=QIE17440.1;transl_table=11 CP040687.1 Genbank gene 4551933 4552172 . - . ID=gene-IXO1088_022405;Name=IXO1088_022405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022405 CP040687.1 Protein Homology CDS 4551933 4552172 . - 0 ID=cds-QIE17441.1;Parent=gene-IXO1088_022405;Dbxref=NCBI_GP:QIE17441.1;Name=QIE17441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_006896746.1;locus_tag=IXO1088_022405;product=plasmid-related protein;protein_id=QIE17441.1;transl_table=11 CP040687.1 Genbank gene 4552411 4553505 . - . ID=gene-IXO1088_022410;Name=IXO1088_022410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022410 CP040687.1 Protein Homology CDS 4552411 4553505 . - 0 ID=cds-QIE17442.1;Parent=gene-IXO1088_022410;Dbxref=NCBI_GP:QIE17442.1;Name=QIE17442.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00589.20;locus_tag=IXO1088_022410;product=site-specific integrase;protein_id=QIE17442.1;transl_table=11 CP040687.1 Genbank gene 4553580 4553656 . - . ID=gene-IXO1088_022415;Name=IXO1088_022415;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_022415 CP040687.1 tRNAscan-SE tRNA 4553580 4553656 . - . ID=rna-IXO1088_022415;Parent=gene-IXO1088_022415;anticodon=(pos:complement(4553620..4553622));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_022415;product=tRNA-Met CP040687.1 tRNAscan-SE exon 4553580 4553656 . - . ID=exon-IXO1088_022415-1;Parent=rna-IXO1088_022415;anticodon=(pos:complement(4553620..4553622));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_022415;product=tRNA-Met CP040687.1 Genbank gene 4553885 4554103 . + . ID=gene-IXO1088_022420;Name=IXO1088_022420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022420 CP040687.1 GeneMarkS-2+ CDS 4553885 4554103 . + 0 ID=cds-QIE17443.1;Parent=gene-IXO1088_022420;Dbxref=NCBI_GP:QIE17443.1;Name=QIE17443.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_022420;product=hypothetical protein;protein_id=QIE17443.1;transl_table=11 CP040687.1 Genbank gene 4554255 4554575 . - . ID=gene-IXO1088_022425;Name=IXO1088_022425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022425 CP040687.1 Protein Homology CDS 4554255 4554575 . - 0 ID=cds-QIE17444.1;Parent=gene-IXO1088_022425;Dbxref=NCBI_GP:QIE17444.1;Name=QIE17444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157070.1;locus_tag=IXO1088_022425;product=hypothetical protein;protein_id=QIE17444.1;transl_table=11 CP040687.1 Genbank gene 4554768 4556642 . - . ID=gene-IXO1088_022430;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=IXO1088_022430 CP040687.1 Protein Homology CDS 4554768 4556642 . - 0 ID=cds-QIE17445.1;Parent=gene-IXO1088_022430;Dbxref=NCBI_GP:QIE17445.1;Name=QIE17445.1;gbkey=CDS;gene=rpoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639081.1;locus_tag=IXO1088_022430;product=RNA polymerase sigma factor RpoD;protein_id=QIE17445.1;transl_table=11 CP040687.1 Genbank gene 4556751 4557191 . - . ID=gene-IXO1088_022435;Name=IXO1088_022435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022435 CP040687.1 Protein Homology CDS 4556751 4557191 . - 0 ID=cds-QIE17446.1;Parent=gene-IXO1088_022435;Dbxref=NCBI_GP:QIE17446.1;Name=QIE17446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639082.2;locus_tag=IXO1088_022435;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=QIE17446.1;transl_table=11 CP040687.1 Genbank gene 4557292 4558206 . + . ID=gene-IXO1088_022440;Name=IXO1088_022440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022440 CP040687.1 Protein Homology CDS 4557292 4558206 . + 0 ID=cds-QIE17447.1;Parent=gene-IXO1088_022440;Dbxref=NCBI_GP:QIE17447.1;Name=QIE17447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639083.1;locus_tag=IXO1088_022440;product=lauroyl acyltransferase;protein_id=QIE17447.1;transl_table=11 CP040687.1 Genbank gene 4558265 4558344 . - . ID=gene-IXO1088_022445;Name=IXO1088_022445;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_022445 CP040687.1 cmsearch ncRNA 4558265 4558344 . - . ID=rna-IXO1088_022445;Parent=gene-IXO1088_022445;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_022445;product=sX9 sRNA CP040687.1 cmsearch exon 4558265 4558344 . - . ID=exon-IXO1088_022445-1;Parent=rna-IXO1088_022445;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_022445;product=sX9 sRNA CP040687.1 Genbank gene 4558406 4558927 . - . ID=gene-IXO1088_022450;Name=IXO1088_022450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022450 CP040687.1 Protein Homology CDS 4558406 4558927 . - 0 ID=cds-QIE17448.1;Parent=gene-IXO1088_022450;Dbxref=NCBI_GP:QIE17448.1;Name=QIE17448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639084.1;locus_tag=IXO1088_022450;product=N-acetyltransferase family protein;protein_id=QIE17448.1;transl_table=11 CP040687.1 Genbank gene 4559170 4560303 . + . ID=gene-IXO1088_022455;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=IXO1088_022455 CP040687.1 Protein Homology CDS 4559170 4560303 . + 0 ID=cds-QIE17449.1;Parent=gene-IXO1088_022455;Dbxref=NCBI_GP:QIE17449.1;Name=QIE17449.1;gbkey=CDS;gene=ribA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639085.1;locus_tag=IXO1088_022455;product=GTP cyclohydrolase II RibA;protein_id=QIE17449.1;transl_table=11 CP040687.1 Genbank gene 4560413 4560922 . + . ID=gene-IXO1088_022460;Name=IXO1088_022460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022460 CP040687.1 Protein Homology CDS 4560413 4560922 . + 0 ID=cds-QIE18115.1;Parent=gene-IXO1088_022460;Dbxref=NCBI_GP:QIE18115.1;Name=QIE18115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091212.1;locus_tag=IXO1088_022460;product=hypothetical protein;protein_id=QIE18115.1;transl_table=11 CP040687.1 Genbank gene 4560919 4562424 . + . ID=gene-IXO1088_022465;Name=IXO1088_022465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022465 CP040687.1 Protein Homology CDS 4560919 4562424 . + 0 ID=cds-QIE17450.1;Parent=gene-IXO1088_022465;Dbxref=NCBI_GP:QIE17450.1;Name=QIE17450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639087.1;locus_tag=IXO1088_022465;product=hypothetical protein;protein_id=QIE17450.1;transl_table=11 CP040687.1 Genbank gene 4562590 4563648 . - . ID=gene-IXO1088_022470;Name=IXO1088_022470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022470 CP040687.1 Protein Homology CDS 4562590 4563648 . - 0 ID=cds-QIE17451.1;Parent=gene-IXO1088_022470;Dbxref=NCBI_GP:QIE17451.1;Name=QIE17451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639088.1;locus_tag=IXO1088_022470;product=CDP-glycerol glycerophosphotransferase;protein_id=QIE17451.1;transl_table=11 CP040687.1 Genbank gene 4563649 4564473 . + . ID=gene-IXO1088_022475;Name=IXO1088_022475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022475 CP040687.1 Protein Homology CDS 4563649 4564473 . + 0 ID=cds-QIE17452.1;Parent=gene-IXO1088_022475;Dbxref=NCBI_GP:QIE17452.1;Name=QIE17452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639089.1;locus_tag=IXO1088_022475;product=glycosyltransferase family 2 protein;protein_id=QIE17452.1;transl_table=11 CP040687.1 Genbank gene 4564671 4565948 . - . ID=gene-IXO1088_022480;Name=IXO1088_022480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022480 CP040687.1 Protein Homology CDS 4564671 4565948 . - 0 ID=cds-QIE17453.1;Parent=gene-IXO1088_022480;Dbxref=NCBI_GP:QIE17453.1;Name=QIE17453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504878.1;locus_tag=IXO1088_022480;product=O-antigen ligase family protein;protein_id=QIE17453.1;transl_table=11 CP040687.1 Genbank gene 4566113 4567834 . - . ID=gene-IXO1088_022485;Name=IXO1088_022485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022485 CP040687.1 Protein Homology CDS 4566113 4567834 . - 0 ID=cds-QIE17454.1;Parent=gene-IXO1088_022485;Dbxref=NCBI_GP:QIE17454.1;Name=QIE17454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639091.2;locus_tag=IXO1088_022485;product=glycosyltransferase family 39 protein;protein_id=QIE17454.1;transl_table=11 CP040687.1 Genbank gene 4567885 4569198 . - . ID=gene-IXO1088_022490;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=IXO1088_022490 CP040687.1 Protein Homology CDS 4567885 4569198 . - 0 ID=cds-QIE17455.1;Parent=gene-IXO1088_022490;Dbxref=NCBI_GP:QIE17455.1;Name=QIE17455.1;gbkey=CDS;gene=rsmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849283.1;locus_tag=IXO1088_022490;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=QIE17455.1;transl_table=11 CP040687.1 Genbank gene 4569198 4570121 . - . ID=gene-IXO1088_022495;Name=IXO1088_022495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022495 CP040687.1 Protein Homology CDS 4569198 4570121 . - 0 ID=cds-QIE17456.1;Parent=gene-IXO1088_022495;Dbxref=NCBI_GP:QIE17456.1;Name=QIE17456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639093.1;locus_tag=IXO1088_022495;product=methionyl-tRNA formyltransferase;protein_id=QIE17456.1;transl_table=11 CP040687.1 Genbank gene 4570515 4571027 . - . ID=gene-IXO1088_022500;Name=IXO1088_022500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022500 CP040687.1 Protein Homology CDS 4570515 4571027 . - 0 ID=cds-QIE17457.1;Parent=gene-IXO1088_022500;Dbxref=NCBI_GP:QIE17457.1;Name=QIE17457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639094.1;locus_tag=IXO1088_022500;product=peptide deformylase;protein_id=QIE17457.1;transl_table=11 CP040687.1 Genbank gene 4571160 4572296 . + . ID=gene-IXO1088_022505;Name=IXO1088_022505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022505 CP040687.1 Protein Homology CDS 4571160 4572296 . + 0 ID=cds-QIE17458.1;Parent=gene-IXO1088_022505;Dbxref=NCBI_GP:QIE17458.1;Name=QIE17458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639095.1;locus_tag=IXO1088_022505;product=LysM peptidoglycan-binding domain-containing protein;protein_id=QIE17458.1;transl_table=11 CP040687.1 Genbank gene 4572368 4573510 . + . ID=gene-IXO1088_022510;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=IXO1088_022510 CP040687.1 Protein Homology CDS 4572368 4573510 . + 0 ID=cds-QIE17459.1;Parent=gene-IXO1088_022510;Dbxref=NCBI_GP:QIE17459.1;Name=QIE17459.1;gbkey=CDS;gene=dprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639096.1;locus_tag=IXO1088_022510;product=DNA-protecting protein DprA;protein_id=QIE17459.1;transl_table=11 CP040687.1 Genbank gene 4573553 4574026 . + . ID=gene-IXO1088_022515;Name=IXO1088_022515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022515 CP040687.1 Protein Homology CDS 4573553 4574026 . + 0 ID=cds-QIE17460.1;Parent=gene-IXO1088_022515;Dbxref=NCBI_GP:QIE17460.1;Name=QIE17460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639097.1;locus_tag=IXO1088_022515;product=DUF494 domain-containing protein;protein_id=QIE17460.1;transl_table=11 CP040687.1 Genbank gene 4574067 4574789 . + . ID=gene-IXO1088_022520;Name=IXO1088_022520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022520 CP040687.1 Protein Homology CDS 4574067 4574789 . + 0 ID=cds-QIE17461.1;Parent=gene-IXO1088_022520;Dbxref=NCBI_GP:QIE17461.1;Name=QIE17461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348786.1;locus_tag=IXO1088_022520;product=DUF4339 domain-containing protein;protein_id=QIE17461.1;transl_table=11 CP040687.1 Genbank gene 4574831 4576105 . + . ID=gene-IXO1088_022525;Name=IXO1088_022525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022525 CP040687.1 Protein Homology CDS 4574831 4576105 . + 0 ID=cds-QIE17462.1;Parent=gene-IXO1088_022525;Dbxref=NCBI_GP:QIE17462.1;Name=QIE17462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112322.1;locus_tag=IXO1088_022525;product=RDD family protein;protein_id=QIE17462.1;transl_table=11 CP040687.1 Genbank gene 4576288 4578780 . + . ID=gene-IXO1088_022530;Name=IXO1088_022530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022530 CP040687.1 Protein Homology CDS 4576288 4578780 . + 0 ID=cds-QIE17463.1;Parent=gene-IXO1088_022530;Dbxref=NCBI_GP:QIE17463.1;Name=QIE17463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370069.1;locus_tag=IXO1088_022530;product=DNA topoisomerase I;protein_id=QIE17463.1;transl_table=11 CP040687.1 Genbank gene 4578791 4579354 . + . ID=gene-IXO1088_022535;Name=IXO1088_022535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022535 CP040687.1 Protein Homology CDS 4578791 4579354 . + 0 ID=cds-QIE17464.1;Parent=gene-IXO1088_022535;Dbxref=NCBI_GP:QIE17464.1;Name=QIE17464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921907.1;locus_tag=IXO1088_022535;product=threonylcarbamoyl-AMP synthase;protein_id=QIE17464.1;transl_table=11 CP040687.1 Genbank gene 4579578 4580351 . + . ID=gene-IXO1088_022540;Name=IXO1088_022540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022540 CP040687.1 Protein Homology CDS 4579578 4580351 . + 0 ID=cds-QIE17465.1;Parent=gene-IXO1088_022540;Dbxref=NCBI_GP:QIE17465.1;Name=QIE17465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572028.1;locus_tag=IXO1088_022540;product=DUF4124 domain-containing protein;protein_id=QIE17465.1;transl_table=11 CP040687.1 Genbank gene 4580348 4581022 . + . ID=gene-IXO1088_022545;Name=IXO1088_022545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022545 CP040687.1 Protein Homology CDS 4580348 4581022 . + 0 ID=cds-QIE17466.1;Parent=gene-IXO1088_022545;Dbxref=NCBI_GP:QIE17466.1;Name=QIE17466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114533.1;locus_tag=IXO1088_022545;product=DUF4124 domain-containing protein;protein_id=QIE17466.1;transl_table=11 CP040687.1 Genbank gene 4581184 4581960 . - . ID=gene-IXO1088_022550;Name=IXO1088_022550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022550 CP040687.1 Protein Homology CDS 4581184 4581960 . - 0 ID=cds-QIE17467.1;Parent=gene-IXO1088_022550;Dbxref=NCBI_GP:QIE17467.1;Name=QIE17467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639105.1;locus_tag=IXO1088_022550;product=SDR family oxidoreductase;protein_id=QIE17467.1;transl_table=11 CP040687.1 Genbank gene 4582067 4582282 . + . ID=gene-IXO1088_022555;Name=IXO1088_022555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022555 CP040687.1 Protein Homology CDS 4582067 4582282 . + 0 ID=cds-QIE17468.1;Parent=gene-IXO1088_022555;Dbxref=NCBI_GP:QIE17468.1;Name=QIE17468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504891.1;locus_tag=IXO1088_022555;product=hypothetical protein;protein_id=QIE17468.1;transl_table=11 CP040687.1 Genbank gene 4582468 4584369 . - . ID=gene-IXO1088_022560;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=IXO1088_022560 CP040687.1 Protein Homology CDS 4582468 4584369 . - 0 ID=cds-QIE17469.1;Parent=gene-IXO1088_022560;Dbxref=NCBI_GP:QIE17469.1;Name=QIE17469.1;gbkey=CDS;gene=sppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639106.1;locus_tag=IXO1088_022560;product=signal peptide peptidase SppA;protein_id=QIE17469.1;transl_table=11 CP040687.1 Genbank gene 4584454 4585830 . - . ID=gene-IXO1088_022565;Name=IXO1088_022565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022565 CP040687.1 Protein Homology CDS 4584454 4585830 . - 0 ID=cds-QIE17470.1;Parent=gene-IXO1088_022565;Dbxref=NCBI_GP:QIE17470.1;Name=QIE17470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639107.1;locus_tag=IXO1088_022565;product=MATE family efflux transporter;protein_id=QIE17470.1;transl_table=11 CP040687.1 Genbank gene 4586339 4587184 . + . ID=gene-IXO1088_022570;Name=IXO1088_022570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022570 CP040687.1 Protein Homology CDS 4586339 4587184 . + 0 ID=cds-QIE17471.1;Parent=gene-IXO1088_022570;Dbxref=NCBI_GP:QIE17471.1;Name=QIE17471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257479.1;locus_tag=IXO1088_022570;product=hypothetical protein;protein_id=QIE17471.1;transl_table=11 CP040687.1 Genbank pseudogene 4587219 4587374 . + . ID=gene-IXO1088_022575;Name=IXO1088_022575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022575;pseudo=true CP040687.1 Protein Homology CDS 4587219 4587374 . + 0 ID=cds-IXO1088_022575;Parent=gene-IXO1088_022575;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258951.1;locus_tag=IXO1088_022575;product=pectate lyase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4587515 4588117 . - . ID=gene-IXO1088_022580;Name=IXO1088_022580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022580 CP040687.1 Protein Homology CDS 4587515 4588117 . - 0 ID=cds-QIE17472.1;Parent=gene-IXO1088_022580;Dbxref=NCBI_GP:QIE17472.1;Name=QIE17472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443959.1;locus_tag=IXO1088_022580;product=DUF3106 domain-containing protein;protein_id=QIE17472.1;transl_table=11 CP040687.1 Genbank gene 4588101 4589126 . - . ID=gene-IXO1088_022585;Name=IXO1088_022585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022585 CP040687.1 Protein Homology CDS 4588101 4589126 . - 0 ID=cds-QIE17473.1;Parent=gene-IXO1088_022585;Dbxref=NCBI_GP:QIE17473.1;Name=QIE17473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157040.1;locus_tag=IXO1088_022585;product=hypothetical protein;protein_id=QIE17473.1;transl_table=11 CP040687.1 Genbank gene 4589592 4591814 . + . ID=gene-IXO1088_022590;Name=IXO1088_022590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022590 CP040687.1 Protein Homology CDS 4589592 4591814 . + 0 ID=cds-QIE17474.1;Parent=gene-IXO1088_022590;Dbxref=NCBI_GP:QIE17474.1;Name=QIE17474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639110.1;locus_tag=IXO1088_022590;product=primosomal protein N';protein_id=QIE17474.1;transl_table=11 CP040687.1 Genbank gene 4592217 4592732 . + . ID=gene-IXO1088_022595;Name=IXO1088_022595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022595 CP040687.1 Protein Homology CDS 4592217 4592732 . + 0 ID=cds-QIE17475.1;Parent=gene-IXO1088_022595;Dbxref=NCBI_GP:QIE17475.1;Name=QIE17475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007889013.1;locus_tag=IXO1088_022595;product=IS110 family transposase;protein_id=QIE17475.1;transl_table=11 CP040687.1 Genbank pseudogene 4592860 4593012 . - . ID=gene-IXO1088_022600;Name=IXO1088_022600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022600;pseudo=true CP040687.1 Protein Homology CDS 4592860 4593012 . - 0 ID=cds-IXO1088_022600;Parent=gene-IXO1088_022600;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1;locus_tag=IXO1088_022600;product=IS4 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4593006 4593191 . + . ID=gene-IXO1088_022605;Name=IXO1088_022605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022605;pseudo=true CP040687.1 Protein Homology CDS 4593006 4593191 . + 0 ID=cds-IXO1088_022605;Parent=gene-IXO1088_022605;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964476.1;locus_tag=IXO1088_022605;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4593262 4594581 . + . ID=gene-IXO1088_022610;Name=IXO1088_022610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022610 CP040687.1 Protein Homology CDS 4593262 4594581 . + 0 ID=cds-QIE17476.1;Parent=gene-IXO1088_022610;Dbxref=NCBI_GP:QIE17476.1;Name=QIE17476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_022610;product=IS701 family transposase;protein_id=QIE17476.1;transl_table=11 CP040687.1 Genbank gene 4594673 4594748 . - . ID=gene-IXO1088_022615;Name=IXO1088_022615;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_022615 CP040687.1 cmsearch ncRNA 4594673 4594748 . - . ID=rna-IXO1088_022615;Parent=gene-IXO1088_022615;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_022615;product=sX9 sRNA CP040687.1 cmsearch exon 4594673 4594748 . - . ID=exon-IXO1088_022615-1;Parent=rna-IXO1088_022615;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_022615;product=sX9 sRNA CP040687.1 Genbank gene 4595049 4596014 . + . ID=gene-IXO1088_022620;Name=IXO1088_022620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022620 CP040687.1 Protein Homology CDS 4595049 4596014 . + 0 ID=cds-QIE17477.1;Parent=gene-IXO1088_022620;Dbxref=NCBI_GP:QIE17477.1;Name=QIE17477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_022620;product=IS1595-like element ISXo5 family transposase;protein_id=QIE17477.1;transl_table=11 CP040687.1 Genbank gene 4596199 4596531 . + . ID=gene-IXO1088_022625;Name=IXO1088_022625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022625 CP040687.1 Protein Homology CDS 4596199 4596531 . + 0 ID=cds-QIE17478.1;Parent=gene-IXO1088_022625;Dbxref=NCBI_GP:QIE17478.1;Name=QIE17478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635912.1;locus_tag=IXO1088_022625;product=divalent-cation tolerance protein CutA;protein_id=QIE17478.1;transl_table=11 CP040687.1 Genbank gene 4596537 4598861 . + . ID=gene-IXO1088_022630;Name=IXO1088_022630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022630 CP040687.1 Protein Homology CDS 4596537 4598861 . + 0 ID=cds-QIE17479.1;Parent=gene-IXO1088_022630;Dbxref=NCBI_GP:QIE17479.1;Name=QIE17479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346209.1;locus_tag=IXO1088_022630;product=cytochrome C biogenesis protein;protein_id=QIE17479.1;transl_table=11 CP040687.1 Genbank gene 4599000 4599260 . + . ID=gene-IXO1088_022635;Name=IXO1088_022635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022635 CP040687.1 Protein Homology CDS 4599000 4599260 . + 0 ID=cds-QIE17480.1;Parent=gene-IXO1088_022635;Dbxref=NCBI_GP:QIE17480.1;Name=QIE17480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301603.1;locus_tag=IXO1088_022635;product=hypothetical protein;protein_id=QIE17480.1;transl_table=11 CP040687.1 Genbank gene 4599181 4599375 . + . ID=gene-IXO1088_022640;Name=IXO1088_022640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022640 CP040687.1 Protein Homology CDS 4599181 4599375 . + 0 ID=cds-QIE17481.1;Parent=gene-IXO1088_022640;Dbxref=NCBI_GP:QIE17481.1;Name=QIE17481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446202.1;locus_tag=IXO1088_022640;product=hypothetical protein;protein_id=QIE17481.1;transl_table=11 CP040687.1 Genbank gene 4599695 4600141 . + . ID=gene-IXO1088_022645;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=IXO1088_022645 CP040687.1 Protein Homology CDS 4599695 4600141 . + 0 ID=cds-QIE17482.1;Parent=gene-IXO1088_022645;Dbxref=NCBI_GP:QIE17482.1;Name=QIE17482.1;gbkey=CDS;gene=aroQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635910.1;locus_tag=IXO1088_022645;product=type II 3-dehydroquinate dehydratase;protein_id=QIE17482.1;transl_table=11 CP040687.1 Genbank gene 4600240 4600725 . + . ID=gene-IXO1088_022650;Name=IXO1088_022650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022650 CP040687.1 Protein Homology CDS 4600240 4600725 . + 0 ID=cds-QIE17483.1;Parent=gene-IXO1088_022650;Dbxref=NCBI_GP:QIE17483.1;Name=QIE17483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635909.1;locus_tag=IXO1088_022650;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=QIE17483.1;transl_table=11 CP040687.1 Genbank gene 4600758 4601165 . + . ID=gene-IXO1088_022655;Name=IXO1088_022655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022655 CP040687.1 Protein Homology CDS 4600758 4601165 . + 0 ID=cds-QIE17484.1;Parent=gene-IXO1088_022655;Dbxref=NCBI_GP:QIE17484.1;Name=QIE17484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407484.1;locus_tag=IXO1088_022655;product=four helix bundle protein;protein_id=QIE17484.1;transl_table=11 CP040687.1 Genbank gene 4601201 4602568 . + . ID=gene-IXO1088_022660;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=IXO1088_022660 CP040687.1 Protein Homology CDS 4601201 4602568 . + 0 ID=cds-QIE17485.1;Parent=gene-IXO1088_022660;Dbxref=NCBI_GP:QIE17485.1;Name=QIE17485.1;gbkey=CDS;gene=accC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660825.1;locus_tag=IXO1088_022660;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=QIE17485.1;transl_table=11 CP040687.1 Genbank gene 4602707 4603072 . - . ID=gene-IXO1088_022665;Name=IXO1088_022665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022665 CP040687.1 Protein Homology CDS 4602707 4603072 . - 0 ID=cds-QIE17486.1;Parent=gene-IXO1088_022665;Dbxref=NCBI_GP:QIE17486.1;Name=QIE17486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635906.1;locus_tag=IXO1088_022665;product=hypothetical protein;protein_id=QIE17486.1;transl_table=11 CP040687.1 Genbank gene 4603069 4603461 . - . ID=gene-IXO1088_022670;Name=IXO1088_022670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022670 CP040687.1 Protein Homology CDS 4603069 4603461 . - 0 ID=cds-QIE18116.1;Parent=gene-IXO1088_022670;Dbxref=NCBI_GP:QIE18116.1;Name=QIE18116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379485.1;locus_tag=IXO1088_022670;product=hypothetical protein;protein_id=QIE18116.1;transl_table=11 CP040687.1 Genbank gene 4603530 4603994 . - . ID=gene-IXO1088_022675;Name=IXO1088_022675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022675 CP040687.1 GeneMarkS-2+ CDS 4603530 4603994 . - 0 ID=cds-QIE17487.1;Parent=gene-IXO1088_022675;Dbxref=NCBI_GP:QIE17487.1;Name=QIE17487.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_022675;product=hypothetical protein;protein_id=QIE17487.1;transl_table=11 CP040687.1 Genbank pseudogene 4604349 4604558 . - . ID=gene-IXO1088_022680;Name=IXO1088_022680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022680;pseudo=true CP040687.1 Protein Homology CDS 4604349 4604558 . - 0 ID=cds-IXO1088_022680;Parent=gene-IXO1088_022680;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301596.1;locus_tag=IXO1088_022680;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4604567 4604953 . + . ID=gene-IXO1088_022685;Name=IXO1088_022685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022685 CP040687.1 Protein Homology CDS 4604567 4604953 . + 0 ID=cds-QIE17488.1;Parent=gene-IXO1088_022685;Dbxref=NCBI_GP:QIE17488.1;Name=QIE17488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368133.1;locus_tag=IXO1088_022685;product=hypothetical protein;protein_id=QIE17488.1;transl_table=11 CP040687.1 Genbank gene 4604940 4605881 . + . ID=gene-IXO1088_022690;Name=IXO1088_022690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022690 CP040687.1 Protein Homology CDS 4604940 4605881 . + 0 ID=cds-QIE17489.1;Parent=gene-IXO1088_022690;Dbxref=NCBI_GP:QIE17489.1;Name=QIE17489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257466.1;locus_tag=IXO1088_022690;product=50S ribosomal protein L11 methyltransferase;protein_id=QIE17489.1;transl_table=11 CP040687.1 Genbank gene 4605876 4605950 . - . ID=gene-IXO1088_022695;Name=IXO1088_022695;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_022695 CP040687.1 cmsearch ncRNA 4605876 4605950 . - . ID=rna-IXO1088_022695;Parent=gene-IXO1088_022695;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_022695;product=sX9 sRNA CP040687.1 cmsearch exon 4605876 4605950 . - . ID=exon-IXO1088_022695-1;Parent=rna-IXO1088_022695;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_022695;product=sX9 sRNA CP040687.1 Genbank gene 4606028 4606543 . - . ID=gene-IXO1088_022700;Name=IXO1088_022700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022700 CP040687.1 Protein Homology CDS 4606028 4606543 . - 0 ID=cds-QIE17490.1;Parent=gene-IXO1088_022700;Dbxref=NCBI_GP:QIE17490.1;Name=QIE17490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571864.1;locus_tag=IXO1088_022700;product=hypothetical protein;protein_id=QIE17490.1;transl_table=11 CP040687.1 Genbank gene 4606687 4607064 . + . ID=gene-IXO1088_022705;Name=IXO1088_022705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022705 CP040687.1 Protein Homology CDS 4606687 4607064 . + 0 ID=cds-QIE17491.1;Parent=gene-IXO1088_022705;Dbxref=NCBI_GP:QIE17491.1;Name=QIE17491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635902.1;locus_tag=IXO1088_022705;product=helix-turn-helix domain-containing protein;protein_id=QIE17491.1;transl_table=11 CP040687.1 Genbank pseudogene 4607148 4607358 . + . ID=gene-IXO1088_022710;Name=IXO1088_022710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022710;pseudo=true CP040687.1 Protein Homology CDS 4607148 4607358 . + 0 ID=cds-IXO1088_022710;Parent=gene-IXO1088_022710;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301593.1;locus_tag=IXO1088_022710;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4607775 4608620 . + . ID=gene-IXO1088_022715;Name=IXO1088_022715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022715 CP040687.1 Protein Homology CDS 4607775 4608620 . + 0 ID=cds-QIE18117.1;Parent=gene-IXO1088_022715;Dbxref=NCBI_GP:QIE18117.1;Name=QIE18117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303063.1;locus_tag=IXO1088_022715;product=DUF3426 domain-containing protein;protein_id=QIE18117.1;transl_table=11 CP040687.1 Genbank gene 4608727 4608999 . + . ID=gene-IXO1088_022720;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=IXO1088_022720 CP040687.1 Protein Homology CDS 4608727 4608999 . + 0 ID=cds-QIE17492.1;Parent=gene-IXO1088_022720;Dbxref=NCBI_GP:QIE17492.1;Name=QIE17492.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635900.1;locus_tag=IXO1088_022720;product=DNA-binding transcriptional regulator Fis;protein_id=QIE17492.1;transl_table=11 CP040687.1 Genbank pseudogene 4609404 4609595 . + . ID=gene-IXO1088_022725;Name=IXO1088_022725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022725;pseudo=true CP040687.1 Protein Homology CDS 4609404 4609595 . + 0 ID=cds-IXO1088_022725;Parent=gene-IXO1088_022725;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_022725;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4609684 4610649 . + . ID=gene-IXO1088_022730;Name=IXO1088_022730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022730 CP040687.1 Protein Homology CDS 4609684 4610649 . + 0 ID=cds-QIE17493.1;Parent=gene-IXO1088_022730;Dbxref=NCBI_GP:QIE17493.1;Name=QIE17493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_022730;product=IS1595-like element ISXo5 family transposase;protein_id=QIE17493.1;transl_table=11 CP040687.1 Genbank gene 4610646 4610840 . - . ID=gene-IXO1088_022735;Name=IXO1088_022735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022735 CP040687.1 GeneMarkS-2+ CDS 4610646 4610840 . - 0 ID=cds-QIE17494.1;Parent=gene-IXO1088_022735;Dbxref=NCBI_GP:QIE17494.1;Name=QIE17494.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_022735;product=hypothetical protein;protein_id=QIE17494.1;transl_table=11 CP040687.1 Genbank gene 4610910 4611866 . - . ID=gene-IXO1088_022740;Name=IXO1088_022740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022740 CP040687.1 Protein Homology CDS 4610910 4611866 . - 0 ID=cds-QIE17495.1;Parent=gene-IXO1088_022740;Dbxref=NCBI_GP:QIE17495.1;Name=QIE17495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407237.1;locus_tag=IXO1088_022740;product=IS30-like element IS1112a family transposase;protein_id=QIE17495.1;transl_table=11 CP040687.1 Genbank pseudogene 4611941 4614663 . - . ID=gene-IXO1088_022745;Name=IXO1088_022745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022745;pseudo=true CP040687.1 Protein Homology CDS 4611941 4614663 . - 0 ID=cds-IXO1088_022745;Parent=gene-IXO1088_022745;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922617.1;locus_tag=IXO1088_022745;product=hemagglutinin;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4614701 4615105 . - . ID=gene-IXO1088_022750;Name=IXO1088_022750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022750 CP040687.1 GeneMarkS-2+ CDS 4614701 4615105 . - 0 ID=cds-QIE17496.1;Parent=gene-IXO1088_022750;Dbxref=NCBI_GP:QIE17496.1;Name=QIE17496.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_022750;product=hypothetical protein;protein_id=QIE17496.1;transl_table=11 CP040687.1 Genbank pseudogene 4615990 4617621 . - . ID=gene-IXO1088_022755;Name=IXO1088_022755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022755;pseudo=true CP040687.1 Protein Homology CDS 4615990 4617621 . - 0 ID=cds-IXO1088_022755;Parent=gene-IXO1088_022755;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472250.1;locus_tag=IXO1088_022755;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4617657 4618061 . - . ID=gene-IXO1088_022760;Name=IXO1088_022760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022760 CP040687.1 GeneMarkS-2+ CDS 4617657 4618061 . - 0 ID=cds-QIE17497.1;Parent=gene-IXO1088_022760;Dbxref=NCBI_GP:QIE17497.1;Name=QIE17497.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_022760;product=hypothetical protein;protein_id=QIE17497.1;transl_table=11 CP040687.1 Genbank pseudogene 4618064 4622596 . - . ID=gene-IXO1088_022765;Name=IXO1088_022765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022765;pseudo=true CP040687.1 Protein Homology CDS 4618064 4622596 . - 0 ID=cds-IXO1088_022765;Parent=gene-IXO1088_022765;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446229.1;locus_tag=IXO1088_022765;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4622656 4622871 . - . ID=gene-IXO1088_022770;Name=IXO1088_022770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022770;pseudo=true CP040687.1 Protein Homology CDS 4622656 4622871 . - 0 ID=cds-IXO1088_022770;Parent=gene-IXO1088_022770;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637260.1;locus_tag=IXO1088_022770;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4622964 4623215 . + . ID=gene-IXO1088_022775;Name=IXO1088_022775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022775 CP040687.1 Protein Homology CDS 4622964 4623215 . + 0 ID=cds-QIE18118.1;Parent=gene-IXO1088_022775;Dbxref=NCBI_GP:QIE18118.1;Name=QIE18118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303428.1;locus_tag=IXO1088_022775;product=type I toxin-antitoxin system SymE family toxin;protein_id=QIE18118.1;transl_table=11 CP040687.1 Genbank gene 4623273 4623518 . - . ID=gene-IXO1088_022780;Name=IXO1088_022780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022780 CP040687.1 Protein Homology CDS 4623273 4623518 . - 0 ID=cds-QIE17498.1;Parent=gene-IXO1088_022780;Dbxref=NCBI_GP:QIE17498.1;Name=QIE17498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014631653.1;locus_tag=IXO1088_022780;product=DUF1436 family protein;protein_id=QIE17498.1;transl_table=11 CP040687.1 Genbank pseudogene 4623535 4624194 . + . ID=gene-IXO1088_022785;Name=IXO1088_022785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022785;pseudo=true CP040687.1 Protein Homology CDS 4623535 4624194 . + 0 ID=cds-IXO1088_022785;Parent=gene-IXO1088_022785;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1088_022785;product=IS30-like element IS1112b family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4624185 4629713 . - . ID=gene-IXO1088_022790;Name=IXO1088_022790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022790 CP040687.1 Protein Homology CDS 4624185 4629713 . - 0 ID=cds-QIE18119.1;Parent=gene-IXO1088_022790;Dbxref=NCBI_GP:QIE18119.1;Name=QIE18119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504817.1;locus_tag=IXO1088_022790;product=filamentous hemagglutinin;protein_id=QIE18119.1;transl_table=11 CP040687.1 Genbank pseudogene 4630163 4630364 . - . ID=gene-IXO1088_022795;Name=IXO1088_022795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022795;pseudo=true CP040687.1 Protein Homology CDS 4630163 4630364 . - 0 ID=cds-IXO1088_022795;Parent=gene-IXO1088_022795;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637260.1;locus_tag=IXO1088_022795;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4630450 4630728 . + . ID=gene-IXO1088_022800;Name=IXO1088_022800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022800 CP040687.1 Protein Homology CDS 4630450 4630728 . + 0 ID=cds-QIE18120.1;Parent=gene-IXO1088_022800;Dbxref=NCBI_GP:QIE18120.1;Name=QIE18120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501450.1;locus_tag=IXO1088_022800;product=type I toxin-antitoxin system SymE family toxin;protein_id=QIE18120.1;transl_table=11 CP040687.1 Genbank gene 4630858 4631244 . - . ID=gene-IXO1088_022805;Name=IXO1088_022805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022805 CP040687.1 GeneMarkS-2+ CDS 4630858 4631244 . - 0 ID=cds-QIE17499.1;Parent=gene-IXO1088_022805;Dbxref=NCBI_GP:QIE17499.1;Name=QIE17499.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_022805;product=hypothetical protein;protein_id=QIE17499.1;transl_table=11 CP040687.1 Genbank pseudogene 4632466 4634733 . - . ID=gene-IXO1088_022810;Name=IXO1088_022810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022810;pseudo=true CP040687.1 Protein Homology CDS 4632466 4634733 . - 0 ID=cds-IXO1088_022810;Parent=gene-IXO1088_022810;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504827.1;locus_tag=IXO1088_022810;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4634793 4635008 . - . ID=gene-IXO1088_022815;Name=IXO1088_022815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022815;pseudo=true CP040687.1 Protein Homology CDS 4634793 4635008 . - 0 ID=cds-IXO1088_022815;Parent=gene-IXO1088_022815;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_637260.1;locus_tag=IXO1088_022815;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4635101 4635373 . + . ID=gene-IXO1088_022820;Name=IXO1088_022820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022820 CP040687.1 Protein Homology CDS 4635101 4635373 . + 0 ID=cds-QIE17500.1;Parent=gene-IXO1088_022820;Dbxref=NCBI_GP:QIE17500.1;Name=QIE17500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017119015.1;locus_tag=IXO1088_022820;product=type I toxin-antitoxin system SymE family toxin;protein_id=QIE17500.1;transl_table=11 CP040687.1 Genbank gene 4635412 4635822 . - . ID=gene-IXO1088_022825;Name=IXO1088_022825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022825 CP040687.1 GeneMarkS-2+ CDS 4635412 4635822 . - 0 ID=cds-QIE17501.1;Parent=gene-IXO1088_022825;Dbxref=NCBI_GP:QIE17501.1;Name=QIE17501.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_022825;product=hypothetical protein;protein_id=QIE17501.1;transl_table=11 CP040687.1 Genbank gene 4635827 4646557 . - . ID=gene-IXO1088_022830;Name=IXO1088_022830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022830 CP040687.1 Protein Homology CDS 4635827 4646557 . - 0 ID=cds-QIE17502.1;Parent=gene-IXO1088_022830;Dbxref=NCBI_GP:QIE17502.1;Name=QIE17502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446229.1;locus_tag=IXO1088_022830;product=filamentous hemagglutinin N-terminal domain-containing protein;protein_id=QIE17502.1;transl_table=11 CP040687.1 Genbank gene 4646579 4648321 . - . ID=gene-IXO1088_022835;Name=IXO1088_022835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022835 CP040687.1 Protein Homology CDS 4646579 4648321 . - 0 ID=cds-QIE17503.1;Parent=gene-IXO1088_022835;Dbxref=NCBI_GP:QIE17503.1;Name=QIE17503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116046.1;locus_tag=IXO1088_022835;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=QIE17503.1;transl_table=11 CP040687.1 Genbank gene 4648558 4649877 . + . ID=gene-IXO1088_022840;Name=IXO1088_022840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022840 CP040687.1 Protein Homology CDS 4648558 4649877 . + 0 ID=cds-QIE17504.1;Parent=gene-IXO1088_022840;Dbxref=NCBI_GP:QIE17504.1;Name=QIE17504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_022840;product=IS701 family transposase;protein_id=QIE17504.1;transl_table=11 CP040687.1 Genbank gene 4649968 4650044 . - . ID=gene-IXO1088_022845;Name=IXO1088_022845;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_022845 CP040687.1 cmsearch ncRNA 4649968 4650044 . - . ID=rna-IXO1088_022845;Parent=gene-IXO1088_022845;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_022845;product=sX9 sRNA CP040687.1 cmsearch exon 4649968 4650044 . - . ID=exon-IXO1088_022845-1;Parent=rna-IXO1088_022845;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_022845;product=sX9 sRNA CP040687.1 Genbank gene 4650107 4650511 . - . ID=gene-IXO1088_022850;Name=IXO1088_022850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022850 CP040687.1 Protein Homology CDS 4650107 4650511 . - 0 ID=cds-QIE18121.1;Parent=gene-IXO1088_022850;Dbxref=NCBI_GP:QIE18121.1;Name=QIE18121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303060.1;locus_tag=IXO1088_022850;product=hypothetical protein;protein_id=QIE18121.1;transl_table=11 CP040687.1 Genbank pseudogene 4651035 4652000 . + . ID=gene-IXO1088_022855;Name=IXO1088_022855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022855;pseudo=true CP040687.1 Protein Homology CDS 4651035 4652000 . + 0 ID=cds-IXO1088_022855;Parent=gene-IXO1088_022855;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_022855;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4652006 4652395 . - . ID=gene-IXO1088_022860;Name=IXO1088_022860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022860;pseudo=true CP040687.1 Protein Homology CDS 4652006 4652395 . - 0 ID=cds-IXO1088_022860;Parent=gene-IXO1088_022860;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635893.1;locus_tag=IXO1088_022860;product=serine/threonine protein phosphatase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4652392 4653390 . - . ID=gene-IXO1088_022865;Name=IXO1088_022865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022865 CP040687.1 Protein Homology CDS 4652392 4653390 . - 0 ID=cds-QIE17505.1;Parent=gene-IXO1088_022865;Dbxref=NCBI_GP:QIE17505.1;Name=QIE17505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407477.1;locus_tag=IXO1088_022865;product=alpha/beta hydrolase;protein_id=QIE17505.1;transl_table=11 CP040687.1 Genbank pseudogene 4653417 4653710 . - . ID=gene-IXO1088_022870;Name=IXO1088_022870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022870;pseudo=true CP040687.1 Protein Homology CDS 4653417 4653710 . - 0 ID=cds-IXO1088_022870;Parent=gene-IXO1088_022870;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12146.6;locus_tag=IXO1088_022870;product=alpha/beta hydrolase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4653711 4654112 . - . ID=gene-IXO1088_022875;Name=IXO1088_022875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022875 CP040687.1 Protein Homology CDS 4653711 4654112 . - 0 ID=cds-QIE17506.1;Parent=gene-IXO1088_022875;Dbxref=NCBI_GP:QIE17506.1;Name=QIE17506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407476.1;locus_tag=IXO1088_022875;product=alpha/beta hydrolase;protein_id=QIE17506.1;transl_table=11 CP040687.1 Genbank pseudogene 4654238 4654856 . - . ID=gene-IXO1088_022880;Name=IXO1088_022880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022880;pseudo=true CP040687.1 Protein Homology CDS 4654238 4654856 . - 0 ID=cds-IXO1088_022880;Parent=gene-IXO1088_022880;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007967899.1;locus_tag=IXO1088_022880;product=CDP-alcohol phosphatidyltransferase family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4654930 4656513 . + . ID=gene-IXO1088_022885;Name=IXO1088_022885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022885 CP040687.1 Protein Homology CDS 4654930 4656513 . + 0 ID=cds-QIE17507.1;Parent=gene-IXO1088_022885;Dbxref=NCBI_GP:QIE17507.1;Name=QIE17507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635890.1;locus_tag=IXO1088_022885;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH;protein_id=QIE17507.1;transl_table=11 CP040687.1 Genbank gene 4656563 4657798 . + . ID=gene-IXO1088_022890;Name=IXO1088_022890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022890 CP040687.1 Protein Homology CDS 4656563 4657798 . + 0 ID=cds-QIE17508.1;Parent=gene-IXO1088_022890;Dbxref=NCBI_GP:QIE17508.1;Name=QIE17508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257455.1;locus_tag=IXO1088_022890;product=ATPase;protein_id=QIE17508.1;transl_table=11 CP040687.1 Genbank gene 4657798 4658412 . + . ID=gene-IXO1088_022895;Name=IXO1088_022895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022895 CP040687.1 Protein Homology CDS 4657798 4658412 . + 0 ID=cds-QIE17509.1;Parent=gene-IXO1088_022895;Dbxref=NCBI_GP:QIE17509.1;Name=QIE17509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379465.1;locus_tag=IXO1088_022895;product=DUF4276 family protein;protein_id=QIE17509.1;transl_table=11 CP040687.1 Genbank gene 4658433 4659722 . + . ID=gene-IXO1088_022900;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=IXO1088_022900 CP040687.1 Protein Homology CDS 4658433 4659722 . + 0 ID=cds-QIE17510.1;Parent=gene-IXO1088_022900;Dbxref=NCBI_GP:QIE17510.1;Name=QIE17510.1;gbkey=CDS;gene=purD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009573931.1;locus_tag=IXO1088_022900;product=phosphoribosylamine--glycine ligase;protein_id=QIE17510.1;transl_table=11 CP040687.1 Genbank pseudogene 4659875 4660459 . + . ID=gene-IXO1088_022905;Name=IXO1088_022905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022905;pseudo=true CP040687.1 Protein Homology CDS 4659875 4660459 . + 0 ID=cds-IXO1088_022905;Parent=gene-IXO1088_022905;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257453.1;locus_tag=IXO1088_022905;product=chromosome segregation protein SMC;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4660468 4661424 . - . ID=gene-IXO1088_022910;Name=IXO1088_022910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022910 CP040687.1 Protein Homology CDS 4660468 4661424 . - 0 ID=cds-QIE17511.1;Parent=gene-IXO1088_022910;Dbxref=NCBI_GP:QIE17511.1;Name=QIE17511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1088_022910;product=IS30-like element IS1112b family transposase;protein_id=QIE17511.1;transl_table=11 CP040687.1 Genbank gene 4661418 4661849 . + . ID=gene-IXO1088_022915;Name=IXO1088_022915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022915 CP040687.1 Protein Homology CDS 4661418 4661849 . + 0 ID=cds-QIE17512.1;Parent=gene-IXO1088_022915;Dbxref=NCBI_GP:QIE17512.1;Name=QIE17512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407472.1;locus_tag=IXO1088_022915;product=DUF4276 family protein;protein_id=QIE17512.1;transl_table=11 CP040687.1 Genbank gene 4662075 4664288 . + . ID=gene-IXO1088_022920;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=IXO1088_022920 CP040687.1 Protein Homology CDS 4662075 4664288 . + 0 ID=cds-QIE17513.1;Parent=gene-IXO1088_022920;Dbxref=NCBI_GP:QIE17513.1;Name=QIE17513.1;gbkey=CDS;gene=yccS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155946.1;locus_tag=IXO1088_022920;product=TIGR01666 family membrane protein;protein_id=QIE17513.1;transl_table=11 CP040687.1 Genbank pseudogene 4664419 4665608 . - . ID=gene-IXO1088_022925;Name=IXO1088_022925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022925;pseudo=true CP040687.1 Protein Homology CDS 4664419 4665608 . - 0 ID=cds-IXO1088_022925;Parent=gene-IXO1088_022925;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635887.1;locus_tag=IXO1088_022925;product=MFS transporter;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4665706 4666600 . + . ID=gene-IXO1088_022930;Name=IXO1088_022930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022930;pseudo=true CP040687.1 Protein Homology CDS 4665706 4666600 . + 0 ID=cds-IXO1088_022930;Parent=gene-IXO1088_022930;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635886.1;locus_tag=IXO1088_022930;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4666680 4668602 . + . ID=gene-IXO1088_022935;Name=IXO1088_022935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022935 CP040687.1 Protein Homology CDS 4666680 4668602 . + 0 ID=cds-QIE17514.1;Parent=gene-IXO1088_022935;Dbxref=NCBI_GP:QIE17514.1;Name=QIE17514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635885.1;locus_tag=IXO1088_022935;product=MFS transporter;protein_id=QIE17514.1;transl_table=11 CP040687.1 Genbank gene 4668721 4669008 . + . ID=gene-IXO1088_022940;Name=IXO1088_022940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022940 CP040687.1 Protein Homology CDS 4668721 4669008 . + 0 ID=cds-QIE17515.1;Parent=gene-IXO1088_022940;Dbxref=NCBI_GP:QIE17515.1;Name=QIE17515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446238.1;locus_tag=IXO1088_022940;product=hypothetical protein;protein_id=QIE17515.1;transl_table=11 CP040687.1 Genbank gene 4669063 4669443 . + . ID=gene-IXO1088_022945;Name=IXO1088_022945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022945 CP040687.1 Protein Homology CDS 4669063 4669443 . + 0 ID=cds-QIE17516.1;Parent=gene-IXO1088_022945;Dbxref=NCBI_GP:QIE17516.1;Name=QIE17516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257450.1;locus_tag=IXO1088_022945;product=CD225/dispanin family protein;protein_id=QIE17516.1;transl_table=11 CP040687.1 Genbank gene 4669440 4669853 . + . ID=gene-IXO1088_022950;Name=IXO1088_022950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022950 CP040687.1 Protein Homology CDS 4669440 4669853 . + 0 ID=cds-QIE18122.1;Parent=gene-IXO1088_022950;Dbxref=NCBI_GP:QIE18122.1;Name=QIE18122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013534084.1;locus_tag=IXO1088_022950;product=DUF2752 domain-containing protein;protein_id=QIE18122.1;transl_table=11 CP040687.1 Genbank pseudogene 4669871 4670065 . - . ID=gene-IXO1088_022955;Name=IXO1088_022955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022955;pseudo=true CP040687.1 Protein Homology CDS 4669871 4670065 . - 0 ID=cds-IXO1088_022955;Parent=gene-IXO1088_022955;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258951.1;locus_tag=IXO1088_022955;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4670175 4671065 . - . ID=gene-IXO1088_022960;Name=IXO1088_022960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022960 CP040687.1 Protein Homology CDS 4670175 4671065 . - 0 ID=cds-QIE17517.1;Parent=gene-IXO1088_022960;Dbxref=NCBI_GP:QIE17517.1;Name=QIE17517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635882.1;locus_tag=IXO1088_022960;product=hypothetical protein;protein_id=QIE17517.1;transl_table=11 CP040687.1 Genbank gene 4671139 4672029 . - . ID=gene-IXO1088_022965;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=IXO1088_022965 CP040687.1 Protein Homology CDS 4671139 4672029 . - 0 ID=cds-QIE17518.1;Parent=gene-IXO1088_022965;Dbxref=NCBI_GP:QIE17518.1;Name=QIE17518.1;gbkey=CDS;gene=nudC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635881.1;locus_tag=IXO1088_022965;product=NAD(+) diphosphatase;protein_id=QIE17518.1;transl_table=11 CP040687.1 Genbank gene 4672336 4673616 . - . ID=gene-IXO1088_022970;Name=IXO1088_022970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022970 CP040687.1 Protein Homology CDS 4672336 4673616 . - 0 ID=cds-QIE17519.1;Parent=gene-IXO1088_022970;Dbxref=NCBI_GP:QIE17519.1;Name=QIE17519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914181.1;locus_tag=IXO1088_022970;product=alpha/beta hydrolase;protein_id=QIE17519.1;transl_table=11 CP040687.1 Genbank gene 4674543 4674929 . - . ID=gene-IXO1088_022975;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=IXO1088_022975 CP040687.1 Protein Homology CDS 4674543 4674929 . - 0 ID=cds-QIE17520.1;Parent=gene-IXO1088_022975;Dbxref=NCBI_GP:QIE17520.1;Name=QIE17520.1;gbkey=CDS;gene=erpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635880.1;locus_tag=IXO1088_022975;product=iron-sulfur cluster insertion protein ErpA;protein_id=QIE17520.1;transl_table=11 CP040687.1 Genbank pseudogene 4675002 4675451 . - . ID=gene-IXO1088_022980;Name=IXO1088_022980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_022980;pseudo=true CP040687.1 Protein Homology CDS 4675002 4675451 . - 0 ID=cds-IXO1088_022980;Parent=gene-IXO1088_022980;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379445.1;locus_tag=IXO1088_022980;product=polymer-forming cytoskeletal protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4675455 4676192 . - . ID=gene-IXO1088_022985;Name=IXO1088_022985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022985 CP040687.1 Protein Homology CDS 4675455 4676192 . - 0 ID=cds-QIE18123.1;Parent=gene-IXO1088_022985;Dbxref=NCBI_GP:QIE18123.1;Name=QIE18123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635878.2;locus_tag=IXO1088_022985;product=hypothetical protein;protein_id=QIE18123.1;transl_table=11 CP040687.1 Genbank gene 4676333 4676959 . + . ID=gene-IXO1088_022990;Name=IXO1088_022990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022990 CP040687.1 Protein Homology CDS 4676333 4676959 . + 0 ID=cds-QIE17521.1;Parent=gene-IXO1088_022990;Dbxref=NCBI_GP:QIE17521.1;Name=QIE17521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635877.1;locus_tag=IXO1088_022990;product=DUF4126 domain-containing protein;protein_id=QIE17521.1;transl_table=11 CP040687.1 Genbank gene 4677142 4678968 . + . ID=gene-IXO1088_022995;Name=IXO1088_022995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_022995 CP040687.1 Protein Homology CDS 4677142 4678968 . + 0 ID=cds-QIE18124.1;Parent=gene-IXO1088_022995;Dbxref=NCBI_GP:QIE18124.1;Name=QIE18124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635876.2;locus_tag=IXO1088_022995;product=EAL domain-containing protein;protein_id=QIE18124.1;transl_table=11 CP040687.1 Genbank gene 4678969 4681278 . + . ID=gene-IXO1088_023000;Name=IXO1088_023000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023000 CP040687.1 Protein Homology CDS 4678969 4681278 . + 0 ID=cds-QIE17522.1;Parent=gene-IXO1088_023000;Dbxref=NCBI_GP:QIE17522.1;Name=QIE17522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368087.1;locus_tag=IXO1088_023000;product=response regulator;protein_id=QIE17522.1;transl_table=11 CP040687.1 Genbank gene 4681541 4681804 . - . ID=gene-IXO1088_023005;Name=IXO1088_023005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023005 CP040687.1 Protein Homology CDS 4681541 4681804 . - 0 ID=cds-QIE17523.1;Parent=gene-IXO1088_023005;Dbxref=NCBI_GP:QIE17523.1;Name=QIE17523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166331.1;locus_tag=IXO1088_023005;product=hypothetical protein;protein_id=QIE17523.1;transl_table=11 CP040687.1 Genbank gene 4681767 4682875 . + . ID=gene-IXO1088_023010;Name=IXO1088_023010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023010 CP040687.1 Protein Homology CDS 4681767 4682022 . + 0 ID=cds-QIE17524.1;Parent=gene-IXO1088_023010;Dbxref=NCBI_GP:QIE17524.1;Name=QIE17524.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612183.1;locus_tag=IXO1088_023010;product=IS3 family transposase;protein_id=QIE17524.1;transl_table=11 CP040687.1 Protein Homology CDS 4682022 4682875 . + 2 ID=cds-QIE17524.1;Parent=gene-IXO1088_023010;Dbxref=NCBI_GP:QIE17524.1;Name=QIE17524.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612183.1;locus_tag=IXO1088_023010;product=IS3 family transposase;protein_id=QIE17524.1;transl_table=11 CP040687.1 Genbank gene 4682972 4683086 . - . ID=gene-IXO1088_023015;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=IXO1088_023015 CP040687.1 cmsearch rRNA 4682972 4683086 . - . ID=rna-IXO1088_023015;Parent=gene-IXO1088_023015;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_023015;product=5S ribosomal RNA CP040687.1 cmsearch exon 4682972 4683086 . - . ID=exon-IXO1088_023015-1;Parent=rna-IXO1088_023015;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_023015;product=5S ribosomal RNA CP040687.1 Genbank gene 4683251 4686149 . - . ID=gene-IXO1088_023020;Name=IXO1088_023020;gbkey=Gene;gene_biotype=rRNA;locus_tag=IXO1088_023020 CP040687.1 Genbank rRNA 4683251 4686149 . - . ID=rna-IXO1088_023020;Parent=gene-IXO1088_023020;gbkey=rRNA;locus_tag=IXO1088_023020;product=23S ribosomal RNA CP040687.1 Genbank exon 4683251 4686149 . - . ID=exon-IXO1088_023020-1;Parent=rna-IXO1088_023020;gbkey=rRNA;locus_tag=IXO1088_023020;product=23S ribosomal RNA CP040687.1 Genbank gene 4686370 4686446 . - . ID=gene-IXO1088_023025;Name=IXO1088_023025;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_023025 CP040687.1 tRNAscan-SE tRNA 4686370 4686446 . - . ID=rna-IXO1088_023025;Parent=gene-IXO1088_023025;anticodon=(pos:complement(4686410..4686412));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_023025;product=tRNA-Ile CP040687.1 tRNAscan-SE exon 4686370 4686446 . - . ID=exon-IXO1088_023025-1;Parent=rna-IXO1088_023025;anticodon=(pos:complement(4686410..4686412));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_023025;product=tRNA-Ile CP040687.1 Genbank gene 4686466 4686541 . - . ID=gene-IXO1088_023030;Name=IXO1088_023030;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_023030 CP040687.1 tRNAscan-SE tRNA 4686466 4686541 . - . ID=rna-IXO1088_023030;Parent=gene-IXO1088_023030;anticodon=(pos:complement(4686506..4686508));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_023030;product=tRNA-Ala CP040687.1 tRNAscan-SE exon 4686466 4686541 . - . ID=exon-IXO1088_023030-1;Parent=rna-IXO1088_023030;anticodon=(pos:complement(4686506..4686508));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_023030;product=tRNA-Ala CP040687.1 Genbank gene 4686635 4688181 . - . ID=gene-IXO1088_023035;Name=IXO1088_023035;gbkey=Gene;gene_biotype=rRNA;locus_tag=IXO1088_023035 CP040687.1 Genbank rRNA 4686635 4688181 . - . ID=rna-IXO1088_023035;Parent=gene-IXO1088_023035;gbkey=rRNA;locus_tag=IXO1088_023035;product=16S ribosomal RNA CP040687.1 Genbank exon 4686635 4688181 . - . ID=exon-IXO1088_023035-1;Parent=rna-IXO1088_023035;gbkey=rRNA;locus_tag=IXO1088_023035;product=16S ribosomal RNA CP040687.1 Genbank gene 4688906 4690117 . - . ID=gene-IXO1088_023040;Name=IXO1088_023040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023040 CP040687.1 Protein Homology CDS 4688906 4690117 . - 0 ID=cds-QIE17525.1;Parent=gene-IXO1088_023040;Dbxref=NCBI_GP:QIE17525.1;Name=QIE17525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005930865.1;locus_tag=IXO1088_023040;product=tyrosine--tRNA ligase;protein_id=QIE17525.1;transl_table=11 CP040687.1 Genbank gene 4690289 4691707 . + . ID=gene-IXO1088_023045;Name=IXO1088_023045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023045 CP040687.1 Protein Homology CDS 4690289 4691707 . + 0 ID=cds-QIE17526.1;Parent=gene-IXO1088_023045;Dbxref=NCBI_GP:QIE17526.1;Name=QIE17526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115461.1;locus_tag=IXO1088_023045;product=M23 family metallopeptidase;protein_id=QIE17526.1;transl_table=11 CP040687.1 Genbank gene 4691788 4692117 . + . ID=gene-IXO1088_023050;Name=IXO1088_023050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023050 CP040687.1 Protein Homology CDS 4691788 4692117 . + 0 ID=cds-QIE17527.1;Parent=gene-IXO1088_023050;Dbxref=NCBI_GP:QIE17527.1;Name=QIE17527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381997.1;locus_tag=IXO1088_023050;product=hypothetical protein;protein_id=QIE17527.1;transl_table=11 CP040687.1 Genbank gene 4692078 4693211 . + . ID=gene-IXO1088_023055;Name=IXO1088_023055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023055 CP040687.1 Protein Homology CDS 4692078 4693211 . + 0 ID=cds-QIE17528.1;Parent=gene-IXO1088_023055;Dbxref=NCBI_GP:QIE17528.1;Name=QIE17528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901949.1;locus_tag=IXO1088_023055;product=anhydro-N-acetylmuramic acid kinase;protein_id=QIE17528.1;transl_table=11 CP040687.1 Genbank gene 4693249 4693476 . - . ID=gene-IXO1088_023060;Name=IXO1088_023060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023060 CP040687.1 Protein Homology CDS 4693249 4693476 . - 0 ID=cds-QIE17529.1;Parent=gene-IXO1088_023060;Dbxref=NCBI_GP:QIE17529.1;Name=QIE17529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639184.1;locus_tag=IXO1088_023060;product=hypothetical protein;protein_id=QIE17529.1;transl_table=11 CP040687.1 Genbank gene 4693535 4694755 . - . ID=gene-IXO1088_023065;Name=IXO1088_023065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023065 CP040687.1 Protein Homology CDS 4693535 4694755 . - 0 ID=cds-QIE18125.1;Parent=gene-IXO1088_023065;Dbxref=NCBI_GP:QIE18125.1;Name=QIE18125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639185.1;locus_tag=IXO1088_023065;product=AmpG family muropeptide MFS transporter;protein_id=QIE18125.1;transl_table=11 CP040687.1 Genbank gene 4695150 4695950 . - . ID=gene-IXO1088_023070;Name=xth;gbkey=Gene;gene=xth;gene_biotype=protein_coding;locus_tag=IXO1088_023070 CP040687.1 Protein Homology CDS 4695150 4695950 . - 0 ID=cds-QIE17530.1;Parent=gene-IXO1088_023070;Dbxref=NCBI_GP:QIE17530.1;Name=QIE17530.1;gbkey=CDS;gene=xth;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639186.1;locus_tag=IXO1088_023070;product=exodeoxyribonuclease III;protein_id=QIE17530.1;transl_table=11 CP040687.1 Genbank gene 4696078 4696737 . + . ID=gene-IXO1088_023075;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=IXO1088_023075 CP040687.1 Protein Homology CDS 4696078 4696737 . + 0 ID=cds-QIE18126.1;Parent=gene-IXO1088_023075;Dbxref=NCBI_GP:QIE18126.1;Name=QIE18126.1;gbkey=CDS;gene=pyrE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639187.1;locus_tag=IXO1088_023075;product=orotate phosphoribosyltransferase;protein_id=QIE18126.1;transl_table=11 CP040687.1 Genbank gene 4696781 4697440 . + . ID=gene-IXO1088_023080;Name=IXO1088_023080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023080 CP040687.1 Protein Homology CDS 4696781 4697440 . + 0 ID=cds-QIE18127.1;Parent=gene-IXO1088_023080;Dbxref=NCBI_GP:QIE18127.1;Name=QIE18127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300775.1;locus_tag=IXO1088_023080;product=hypothetical protein;protein_id=QIE18127.1;transl_table=11 CP040687.1 Genbank gene 4697554 4698351 . + . ID=gene-IXO1088_023085;Name=IXO1088_023085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023085 CP040687.1 Protein Homology CDS 4697554 4698351 . + 0 ID=cds-QIE17531.1;Parent=gene-IXO1088_023085;Dbxref=NCBI_GP:QIE17531.1;Name=QIE17531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639189.1;locus_tag=IXO1088_023085;product=ParA family protein;protein_id=QIE17531.1;transl_table=11 CP040687.1 Genbank gene 4698351 4699280 . + . ID=gene-IXO1088_023090;Name=IXO1088_023090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023090 CP040687.1 Protein Homology CDS 4698351 4699280 . + 0 ID=cds-QIE17532.1;Parent=gene-IXO1088_023090;Dbxref=NCBI_GP:QIE17532.1;Name=QIE17532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002808429.1;locus_tag=IXO1088_023090;product=ParB/RepB/Spo0J family partition protein;protein_id=QIE17532.1;transl_table=11 CP040687.1 Genbank gene 4699316 4699624 . + . ID=gene-IXO1088_023095;Name=IXO1088_023095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023095 CP040687.1 Protein Homology CDS 4699316 4699624 . + 0 ID=cds-QIE17533.1;Parent=gene-IXO1088_023095;Dbxref=NCBI_GP:QIE17533.1;Name=QIE17533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300778.1;locus_tag=IXO1088_023095;product=mitomycin resistance protein;protein_id=QIE17533.1;transl_table=11 CP040687.1 Genbank gene 4699830 4700795 . + . ID=gene-IXO1088_023100;Name=IXO1088_023100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023100 CP040687.1 Protein Homology CDS 4699830 4700795 . + 0 ID=cds-QIE17534.1;Parent=gene-IXO1088_023100;Dbxref=NCBI_GP:QIE17534.1;Name=QIE17534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639193.1;locus_tag=IXO1088_023100;product=NAD-dependent epimerase/dehydratase family protein;protein_id=QIE17534.1;transl_table=11 CP040687.1 Genbank gene 4701150 4701872 . + . ID=gene-IXO1088_023105;Name=IXO1088_023105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023105 CP040687.1 Protein Homology CDS 4701150 4701872 . + 0 ID=cds-QIE17535.1;Parent=gene-IXO1088_023105;Dbxref=NCBI_GP:QIE17535.1;Name=QIE17535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639194.1;locus_tag=IXO1088_023105;product=glycosyltransferase family 2 protein;protein_id=QIE17535.1;transl_table=11 CP040687.1 Genbank gene 4701872 4702213 . + . ID=gene-IXO1088_023110;Name=IXO1088_023110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023110 CP040687.1 Protein Homology CDS 4701872 4702213 . + 0 ID=cds-QIE17536.1;Parent=gene-IXO1088_023110;Dbxref=NCBI_GP:QIE17536.1;Name=QIE17536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639195.1;locus_tag=IXO1088_023110;product=hypothetical protein;protein_id=QIE17536.1;transl_table=11 CP040687.1 Genbank gene 4702631 4703179 . + . ID=gene-IXO1088_023115;Name=IXO1088_023115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023115 CP040687.1 Protein Homology CDS 4702631 4703179 . + 0 ID=cds-QIE17537.1;Parent=gene-IXO1088_023115;Dbxref=NCBI_GP:QIE17537.1;Name=QIE17537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300782.1;locus_tag=IXO1088_023115;product=hypothetical protein;protein_id=QIE17537.1;transl_table=11 CP040687.1 Genbank gene 4703287 4705635 . - . ID=gene-IXO1088_023120;Name=IXO1088_023120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023120 CP040687.1 Protein Homology CDS 4703287 4705635 . - 0 ID=cds-QIE17538.1;Parent=gene-IXO1088_023120;Dbxref=NCBI_GP:QIE17538.1;Name=QIE17538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161151.1;locus_tag=IXO1088_023120;product=phosphomannomutase/phosphoglucomutase;protein_id=QIE17538.1;transl_table=11 CP040687.1 Genbank gene 4705649 4706116 . - . ID=gene-IXO1088_023125;Name=IXO1088_023125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023125 CP040687.1 Protein Homology CDS 4705649 4706116 . - 0 ID=cds-QIE17539.1;Parent=gene-IXO1088_023125;Dbxref=NCBI_GP:QIE17539.1;Name=QIE17539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002808437.1;locus_tag=IXO1088_023125;product=dUTP diphosphatase;protein_id=QIE17539.1;transl_table=11 CP040687.1 Genbank gene 4706113 4707387 . - . ID=gene-IXO1088_023130;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=IXO1088_023130 CP040687.1 Protein Homology CDS 4706113 4707387 . - 0 ID=cds-QIE17540.1;Parent=gene-IXO1088_023130;Dbxref=NCBI_GP:QIE17540.1;Name=QIE17540.1;gbkey=CDS;gene=coaBC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639199.1;locus_tag=IXO1088_023130;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=QIE17540.1;transl_table=11 CP040687.1 Genbank gene 4707484 4708161 . + . ID=gene-IXO1088_023135;Name=IXO1088_023135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023135 CP040687.1 Protein Homology CDS 4707484 4708161 . + 0 ID=cds-QIE18128.1;Parent=gene-IXO1088_023135;Dbxref=NCBI_GP:QIE18128.1;Name=QIE18128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381948.1;locus_tag=IXO1088_023135;product=JAB domain-containing protein;protein_id=QIE18128.1;transl_table=11 CP040687.1 Genbank gene 4708249 4709937 . + . ID=gene-IXO1088_023140;Name=IXO1088_023140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023140 CP040687.1 Protein Homology CDS 4708249 4709937 . + 0 ID=cds-QIE17541.1;Parent=gene-IXO1088_023140;Dbxref=NCBI_GP:QIE17541.1;Name=QIE17541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639201.1;locus_tag=IXO1088_023140;product=arginine--tRNA ligase;protein_id=QIE17541.1;transl_table=11 CP040687.1 Genbank gene 4710117 4710998 . + . ID=gene-IXO1088_023145;Name=IXO1088_023145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023145 CP040687.1 Protein Homology CDS 4710117 4710998 . + 0 ID=cds-QIE17542.1;Parent=gene-IXO1088_023145;Dbxref=NCBI_GP:QIE17542.1;Name=QIE17542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639202.1;locus_tag=IXO1088_023145;product=SPOR domain-containing protein;protein_id=QIE17542.1;transl_table=11 CP040687.1 Genbank gene 4711005 4711469 . + . ID=gene-IXO1088_023150;Name=IXO1088_023150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023150 CP040687.1 Protein Homology CDS 4711005 4711469 . + 0 ID=cds-QIE17543.1;Parent=gene-IXO1088_023150;Dbxref=NCBI_GP:QIE17543.1;Name=QIE17543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158751.1;locus_tag=IXO1088_023150;product=hypothetical protein;protein_id=QIE17543.1;transl_table=11 CP040687.1 Genbank gene 4711564 4712319 . + . ID=gene-IXO1088_023155;Name=IXO1088_023155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023155 CP040687.1 Protein Homology CDS 4711564 4712319 . + 0 ID=cds-QIE17544.1;Parent=gene-IXO1088_023155;Dbxref=NCBI_GP:QIE17544.1;Name=QIE17544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639204.1;locus_tag=IXO1088_023155;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=QIE17544.1;transl_table=11 CP040687.1 Genbank pseudogene 4712611 4713045 . - . ID=gene-IXO1088_023160;Name=IXO1088_023160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023160;pseudo=true CP040687.1 Protein Homology CDS 4712611 4713045 . - 0 ID=cds-IXO1088_023160;Parent=gene-IXO1088_023160;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1088_023160;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4713287 4714147 . - . ID=gene-IXO1088_023165;Name=IXO1088_023165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023165 CP040687.1 Protein Homology CDS 4713287 4714147 . - 0 ID=cds-QIE17545.1;Parent=gene-IXO1088_023165;Dbxref=NCBI_GP:QIE17545.1;Name=QIE17545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257417.1;locus_tag=IXO1088_023165;product=serine protein kinase RIO;protein_id=QIE17545.1;transl_table=11 CP040687.1 Genbank pseudogene 4714295 4715156 . + . ID=gene-IXO1088_023170;Name=IXO1088_023170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023170;pseudo=true CP040687.1 Protein Homology CDS 4714295 4715156 . + 0 ID=cds-IXO1088_023170;Parent=gene-IXO1088_023170;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635768.1;locus_tag=IXO1088_023170;product=IclR family transcriptional regulator;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4715504 4716343 . - . ID=gene-IXO1088_023175;Name=IXO1088_023175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023175 CP040687.1 Protein Homology CDS 4715504 4716343 . - 0 ID=cds-QIE17546.1;Parent=gene-IXO1088_023175;Dbxref=NCBI_GP:QIE17546.1;Name=QIE17546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257415.1;locus_tag=IXO1088_023175;product=alpha/beta hydrolase;protein_id=QIE17546.1;transl_table=11 CP040687.1 Genbank gene 4716614 4717027 . - . ID=gene-IXO1088_023180;Name=pcaC;gbkey=Gene;gene=pcaC;gene_biotype=protein_coding;locus_tag=IXO1088_023180 CP040687.1 Protein Homology CDS 4716614 4717027 . - 0 ID=cds-QIE17547.1;Parent=gene-IXO1088_023180;Dbxref=NCBI_GP:QIE17547.1;Name=QIE17547.1;gbkey=CDS;gene=pcaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485683.1;locus_tag=IXO1088_023180;product=4-carboxymuconolactone decarboxylase;protein_id=QIE17547.1;transl_table=11 CP040687.1 Genbank gene 4717053 4717835 . - . ID=gene-IXO1088_023185;Name=pcaD;gbkey=Gene;gene=pcaD;gene_biotype=protein_coding;locus_tag=IXO1088_023185 CP040687.1 Protein Homology CDS 4717053 4717835 . - 0 ID=cds-QIE17548.1;Parent=gene-IXO1088_023185;Dbxref=NCBI_GP:QIE17548.1;Name=QIE17548.1;gbkey=CDS;gene=pcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635765.1;locus_tag=IXO1088_023185;product=3-oxoadipate enol-lactonase;protein_id=QIE17548.1;transl_table=11 CP040687.1 Genbank gene 4717846 4719198 . - . ID=gene-IXO1088_023190;Name=IXO1088_023190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023190 CP040687.1 Protein Homology CDS 4717846 4719198 . - 0 ID=cds-QIE17549.1;Parent=gene-IXO1088_023190;Dbxref=NCBI_GP:QIE17549.1;Name=QIE17549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113350.1;locus_tag=IXO1088_023190;product=3-carboxy-cis%2Ccis-muconate cycloisomerase;protein_id=QIE17549.1;transl_table=11 CP040687.1 Genbank gene 4719349 4719426 . - . ID=gene-IXO1088_023195;Name=IXO1088_023195;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_023195 CP040687.1 cmsearch ncRNA 4719349 4719426 . - . ID=rna-IXO1088_023195;Parent=gene-IXO1088_023195;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_023195;product=sX9 sRNA CP040687.1 cmsearch exon 4719349 4719426 . - . ID=exon-IXO1088_023195-1;Parent=rna-IXO1088_023195;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_023195;product=sX9 sRNA CP040687.1 Genbank gene 4719699 4720262 . - . ID=gene-IXO1088_023200;Name=pcaG;gbkey=Gene;gene=pcaG;gene_biotype=protein_coding;locus_tag=IXO1088_023200 CP040687.1 Protein Homology CDS 4719699 4720262 . - 0 ID=cds-QIE17550.1;Parent=gene-IXO1088_023200;Dbxref=NCBI_GP:QIE17550.1;Name=QIE17550.1;gbkey=CDS;gene=pcaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635763.1;locus_tag=IXO1088_023200;product=protocatechuate 3%2C4-dioxygenase subunit alpha;protein_id=QIE17550.1;transl_table=11 CP040687.1 Genbank gene 4720267 4720995 . - . ID=gene-IXO1088_023205;Name=pcaH;gbkey=Gene;gene=pcaH;gene_biotype=protein_coding;locus_tag=IXO1088_023205 CP040687.1 Protein Homology CDS 4720267 4720995 . - 0 ID=cds-QIE17551.1;Parent=gene-IXO1088_023205;Dbxref=NCBI_GP:QIE17551.1;Name=QIE17551.1;gbkey=CDS;gene=pcaH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118364.1;locus_tag=IXO1088_023205;product=protocatechuate 3%2C4-dioxygenase subunit beta;protein_id=QIE17551.1;transl_table=11 CP040687.1 Genbank gene 4721074 4722282 . - . ID=gene-IXO1088_023210;Name=pcaF;gbkey=Gene;gene=pcaF;gene_biotype=protein_coding;locus_tag=IXO1088_023210 CP040687.1 Protein Homology CDS 4721074 4722282 . - 0 ID=cds-QIE17552.1;Parent=gene-IXO1088_023210;Dbxref=NCBI_GP:QIE17552.1;Name=QIE17552.1;gbkey=CDS;gene=pcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635761.1;locus_tag=IXO1088_023210;product=3-oxoadipyl-CoA thiolase;protein_id=QIE17552.1;transl_table=11 CP040687.1 Genbank pseudogene 4722279 4722764 . - . ID=gene-IXO1088_023215;Name=IXO1088_023215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023215;pseudo=true CP040687.1 Protein Homology CDS 4722279 4722764 . - 0 ID=cds-IXO1088_023215;Parent=gene-IXO1088_023215;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635760.1;locus_tag=IXO1088_023215;product=CoA-transferase subunit beta;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4722794 4723895 . - . ID=gene-IXO1088_023220;Name=IXO1088_023220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023220;pseudo=true CP040687.1 Protein Homology CDS 4722794 4723895 . - 0 ID=cds-IXO1088_023220;Parent=gene-IXO1088_023220;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=IXO1088_023220;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4724109 4724435 . - . ID=gene-IXO1088_023225;Name=IXO1088_023225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023225 CP040687.1 Protein Homology CDS 4724109 4724435 . - 0 ID=cds-QIE17553.1;Parent=gene-IXO1088_023225;Dbxref=NCBI_GP:QIE17553.1;Name=QIE17553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639322.1;locus_tag=IXO1088_023225;product=thioredoxin family protein;protein_id=QIE17553.1;transl_table=11 CP040687.1 Genbank gene 4724407 4724901 . - . ID=gene-IXO1088_023230;Name=IXO1088_023230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023230 CP040687.1 Protein Homology CDS 4724407 4724901 . - 0 ID=cds-QIE17554.1;Parent=gene-IXO1088_023230;Dbxref=NCBI_GP:QIE17554.1;Name=QIE17554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005989848.1;locus_tag=IXO1088_023230;product=flavodoxin;protein_id=QIE17554.1;transl_table=11 CP040687.1 Genbank gene 4725107 4725598 . - . ID=gene-IXO1088_023235;Name=IXO1088_023235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023235 CP040687.1 Protein Homology CDS 4725107 4725598 . - 0 ID=cds-QIE18129.1;Parent=gene-IXO1088_023235;Dbxref=NCBI_GP:QIE18129.1;Name=QIE18129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369832.1;locus_tag=IXO1088_023235;product=hypothetical protein;protein_id=QIE18129.1;transl_table=11 CP040687.1 Genbank gene 4725598 4726296 . - . ID=gene-IXO1088_023240;Name=IXO1088_023240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023240 CP040687.1 Protein Homology CDS 4725598 4726296 . - 0 ID=cds-QIE17555.1;Parent=gene-IXO1088_023240;Dbxref=NCBI_GP:QIE17555.1;Name=QIE17555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369829.1;locus_tag=IXO1088_023240;product=DUF3800 domain-containing protein;protein_id=QIE17555.1;transl_table=11 CP040687.1 Genbank gene 4726339 4727382 . - . ID=gene-IXO1088_023245;Name=IXO1088_023245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023245 CP040687.1 Protein Homology CDS 4726339 4727382 . - 0 ID=cds-QIE17556.1;Parent=gene-IXO1088_023245;Dbxref=NCBI_GP:QIE17556.1;Name=QIE17556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639324.1;locus_tag=IXO1088_023245;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=QIE17556.1;transl_table=11 CP040687.1 Genbank pseudogene 4727381 4727561 . + . ID=gene-IXO1088_023250;Name=IXO1088_023250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023250;pseudo=true CP040687.1 Protein Homology CDS 4727381 4727561 . + 0 ID=cds-IXO1088_023250;Parent=gene-IXO1088_023250;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163438.1;locus_tag=IXO1088_023250;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4727558 4730056 . - . ID=gene-IXO1088_023255;Name=IXO1088_023255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023255 CP040687.1 Protein Homology CDS 4727558 4730056 . - 0 ID=cds-QIE17557.1;Parent=gene-IXO1088_023255;Dbxref=NCBI_GP:QIE17557.1;Name=QIE17557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639325.1;locus_tag=IXO1088_023255;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=QIE17557.1;transl_table=11 CP040687.1 Genbank pseudogene 4730226 4730592 . + . ID=gene-IXO1088_023260;Name=IXO1088_023260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023260;pseudo=true CP040687.1 Protein Homology CDS 4730226 4730592 . + 0 ID=cds-IXO1088_023260;Parent=gene-IXO1088_023260;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369820.1;locus_tag=IXO1088_023260;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4730653 4731696 . - . ID=gene-IXO1088_023265;Name=IXO1088_023265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023265 CP040687.1 Protein Homology CDS 4730653 4731696 . - 0 ID=cds-QIE17558.1;Parent=gene-IXO1088_023265;Dbxref=NCBI_GP:QIE17558.1;Name=QIE17558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639326.1;locus_tag=IXO1088_023265;product=DUF475 domain-containing protein;protein_id=QIE17558.1;transl_table=11 CP040687.1 Genbank gene 4731803 4734511 . - . ID=gene-IXO1088_023270;Name=IXO1088_023270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023270 CP040687.1 Protein Homology CDS 4731803 4734511 . - 0 ID=cds-QIE17559.1;Parent=gene-IXO1088_023270;Dbxref=NCBI_GP:QIE17559.1;Name=QIE17559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639327.1;locus_tag=IXO1088_023270;product=bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase;protein_id=QIE17559.1;transl_table=11 CP040687.1 Genbank gene 4734798 4735412 . - . ID=gene-IXO1088_023275;Name=IXO1088_023275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023275 CP040687.1 Protein Homology CDS 4734798 4735412 . - 0 ID=cds-QIE18130.1;Parent=gene-IXO1088_023275;Dbxref=NCBI_GP:QIE18130.1;Name=QIE18130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639328.2;locus_tag=IXO1088_023275;product=hypothetical protein;protein_id=QIE18130.1;transl_table=11 CP040687.1 Genbank gene 4735490 4736857 . - . ID=gene-IXO1088_023280;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=IXO1088_023280 CP040687.1 Protein Homology CDS 4735490 4736857 . - 0 ID=cds-QIE17560.1;Parent=gene-IXO1088_023280;Dbxref=NCBI_GP:QIE17560.1;Name=QIE17560.1;gbkey=CDS;gene=mgtE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639329.1;locus_tag=IXO1088_023280;product=magnesium transporter;protein_id=QIE17560.1;transl_table=11 CP040687.1 Genbank gene 4737535 4739352 . + . ID=gene-IXO1088_023285;Name=IXO1088_023285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023285 CP040687.1 Protein Homology CDS 4737535 4739352 . + 0 ID=cds-QIE17561.1;Parent=gene-IXO1088_023285;Dbxref=NCBI_GP:QIE17561.1;Name=QIE17561.1;Note=involved in potassium efflux;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257399.1;locus_tag=IXO1088_023285;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=QIE17561.1;transl_table=11 CP040687.1 Genbank gene 4739452 4740771 . - . ID=gene-IXO1088_023290;Name=IXO1088_023290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023290 CP040687.1 Protein Homology CDS 4739452 4740771 . - 0 ID=cds-QIE17562.1;Parent=gene-IXO1088_023290;Dbxref=NCBI_GP:QIE17562.1;Name=QIE17562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_023290;product=IS701 family transposase;protein_id=QIE17562.1;transl_table=11 CP040687.1 Genbank gene 4741252 4743195 . - . ID=gene-IXO1088_023295;Name=IXO1088_023295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023295 CP040687.1 Protein Homology CDS 4741252 4743195 . - 0 ID=cds-QIE17563.1;Parent=gene-IXO1088_023295;Dbxref=NCBI_GP:QIE17563.1;Name=QIE17563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639332.1;locus_tag=IXO1088_023295;product=glucose-6-phosphate dehydrogenase;protein_id=QIE17563.1;transl_table=11 CP040687.1 Genbank pseudogene 4743081 4744844 . - . ID=gene-IXO1088_023300;Name=IXO1088_023300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023300;pseudo=true CP040687.1 Protein Homology CDS 4743081 4744844 . - 0 ID=cds-IXO1088_023300;Parent=gene-IXO1088_023300;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014401536.1;locus_tag=IXO1088_023300;product=glycoside hydrolase family 15 protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4744908 4745237 . - . ID=gene-IXO1088_023305;Name=IXO1088_023305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023305 CP040687.1 Protein Homology CDS 4744908 4745237 . - 0 ID=cds-QIE17564.1;Parent=gene-IXO1088_023305;Dbxref=NCBI_GP:QIE17564.1;Name=QIE17564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639334.1;locus_tag=IXO1088_023305;product=phosphotyrosine protein phosphatase;protein_id=QIE17564.1;transl_table=11 CP040687.1 Genbank gene 4745264 4748584 . - . ID=gene-IXO1088_023310;Name=IXO1088_023310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023310 CP040687.1 Protein Homology CDS 4745264 4748584 . - 0 ID=cds-QIE17565.1;Parent=gene-IXO1088_023310;Dbxref=NCBI_GP:QIE17565.1;Name=QIE17565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639335.1;locus_tag=IXO1088_023310;product=hypothetical protein;protein_id=QIE17565.1;transl_table=11 CP040687.1 Genbank gene 4748577 4748837 . - . ID=gene-IXO1088_023315;Name=IXO1088_023315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023315 CP040687.1 Protein Homology CDS 4748577 4748837 . - 0 ID=cds-QIE17566.1;Parent=gene-IXO1088_023315;Dbxref=NCBI_GP:QIE17566.1;Name=QIE17566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639336.1;locus_tag=IXO1088_023315;product=YcgL domain-containing protein;protein_id=QIE17566.1;transl_table=11 CP040687.1 Genbank gene 4749056 4750255 . + . ID=gene-IXO1088_023320;Name=IXO1088_023320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023320 CP040687.1 Protein Homology CDS 4749056 4750255 . + 0 ID=cds-QIE17567.1;Parent=gene-IXO1088_023320;Dbxref=NCBI_GP:QIE17567.1;Name=QIE17567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639337.1;locus_tag=IXO1088_023320;product=beta-ketoacyl-[acyl-carrier-protein] synthase family protein;protein_id=QIE17567.1;transl_table=11 CP040687.1 Genbank gene 4750255 4751028 . + . ID=gene-IXO1088_023325;Name=IXO1088_023325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023325 CP040687.1 Protein Homology CDS 4750255 4751028 . + 0 ID=cds-QIE17568.1;Parent=gene-IXO1088_023325;Dbxref=NCBI_GP:QIE17568.1;Name=QIE17568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302406.1;locus_tag=IXO1088_023325;product=beta-ketoacyl synthase chain length factor;protein_id=QIE17568.1;transl_table=11 CP040687.1 Genbank gene 4751025 4751846 . + . ID=gene-IXO1088_023330;Name=IXO1088_023330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023330 CP040687.1 Protein Homology CDS 4751025 4751846 . + 0 ID=cds-QIE17569.1;Parent=gene-IXO1088_023330;Dbxref=NCBI_GP:QIE17569.1;Name=QIE17569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369782.1;locus_tag=IXO1088_023330;product=glycosyltransferase family 2 protein;protein_id=QIE17569.1;transl_table=11 CP040687.1 Genbank gene 4751843 4753465 . + . ID=gene-IXO1088_023335;Name=IXO1088_023335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023335 CP040687.1 Protein Homology CDS 4751843 4753465 . + 0 ID=cds-QIE17570.1;Parent=gene-IXO1088_023335;Dbxref=NCBI_GP:QIE17570.1;Name=QIE17570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639340.1;locus_tag=IXO1088_023335;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=QIE17570.1;transl_table=11 CP040687.1 Genbank gene 4753633 4753890 . + . ID=gene-IXO1088_023340;Name=IXO1088_023340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023340 CP040687.1 Protein Homology CDS 4753633 4753890 . + 0 ID=cds-QIE18131.1;Parent=gene-IXO1088_023340;Dbxref=NCBI_GP:QIE18131.1;Name=QIE18131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501609.1;locus_tag=IXO1088_023340;product=hypothetical protein;protein_id=QIE18131.1;transl_table=11 CP040687.1 Genbank gene 4753994 4754731 . - . ID=gene-IXO1088_023345;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=IXO1088_023345 CP040687.1 Protein Homology CDS 4753994 4754731 . - 0 ID=cds-QIE17571.1;Parent=gene-IXO1088_023345;Dbxref=NCBI_GP:QIE17571.1;Name=QIE17571.1;gbkey=CDS;gene=fabG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639342.1;locus_tag=IXO1088_023345;product=3-oxoacyl-ACP reductase FabG;protein_id=QIE17571.1;transl_table=11 CP040687.1 Genbank gene 4754910 4755969 . - . ID=gene-IXO1088_023350;Name=IXO1088_023350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023350 CP040687.1 Protein Homology CDS 4755079 4755969 . - 0 ID=cds-QIE18132.1;Parent=gene-IXO1088_023350;Dbxref=NCBI_GP:QIE18132.1;Name=QIE18132.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408472.1;locus_tag=IXO1088_023350;product=IS630 family transposase;protein_id=QIE18132.1;transl_table=11 CP040687.1 Protein Homology CDS 4754910 4755077 . - 0 ID=cds-QIE18132.1;Parent=gene-IXO1088_023350;Dbxref=NCBI_GP:QIE18132.1;Name=QIE18132.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408472.1;locus_tag=IXO1088_023350;product=IS630 family transposase;protein_id=QIE18132.1;transl_table=11 CP040687.1 Genbank pseudogene 4756015 4756197 . + . ID=gene-IXO1088_023355;Name=IXO1088_023355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023355;pseudo=true CP040687.1 Protein Homology CDS 4756015 4756197 . + 0 ID=cds-IXO1088_023355;Parent=gene-IXO1088_023355;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501284.1;locus_tag=IXO1088_023355;product=HlyD family efflux transporter periplasmic adaptor subunit;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4756394 4757599 . - . ID=gene-IXO1088_023360;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=IXO1088_023360 CP040687.1 Protein Homology CDS 4756394 4757599 . - 0 ID=cds-QIE17572.1;Parent=gene-IXO1088_023360;Dbxref=NCBI_GP:QIE17572.1;Name=QIE17572.1;gbkey=CDS;gene=bioF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635782.1;locus_tag=IXO1088_023360;product=8-amino-7-oxononanoate synthase;protein_id=QIE17572.1;transl_table=11 CP040687.1 Genbank gene 4757691 4758725 . - . ID=gene-IXO1088_023365;Name=IXO1088_023365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023365 CP040687.1 Protein Homology CDS 4757691 4758725 . - 0 ID=cds-QIE17573.1;Parent=gene-IXO1088_023365;Dbxref=NCBI_GP:QIE17573.1;Name=QIE17573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635783.1;locus_tag=IXO1088_023365;product=biotin synthase;protein_id=QIE17573.1;transl_table=11 CP040687.1 Genbank gene 4758769 4759500 . + . ID=gene-IXO1088_023370;Name=IXO1088_023370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023370 CP040687.1 Protein Homology CDS 4758769 4759500 . + 0 ID=cds-QIE17574.1;Parent=gene-IXO1088_023370;Dbxref=NCBI_GP:QIE17574.1;Name=QIE17574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635784.1;locus_tag=IXO1088_023370;product=ComF family protein;protein_id=QIE17574.1;transl_table=11 CP040687.1 Genbank gene 4759762 4760661 . - . ID=gene-IXO1088_023375;Name=IXO1088_023375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023375 CP040687.1 Protein Homology CDS 4759762 4760661 . - 0 ID=cds-QIE17575.1;Parent=gene-IXO1088_023375;Dbxref=NCBI_GP:QIE17575.1;Name=QIE17575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050286.1;locus_tag=IXO1088_023375;product=4-hydroxybenzoate octaprenyltransferase;protein_id=QIE17575.1;transl_table=11 CP040687.1 Genbank pseudogene 4760660 4760970 . + . ID=gene-IXO1088_023380;Name=IXO1088_023380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023380;pseudo=true CP040687.1 Protein Homology CDS 4760660 4760970 . + 0 ID=cds-IXO1088_023380;Parent=gene-IXO1088_023380;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304484.1;locus_tag=IXO1088_023380;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4761116 4761192 . + . ID=gene-IXO1088_023385;Name=IXO1088_023385;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_023385 CP040687.1 tRNAscan-SE tRNA 4761116 4761192 . + . ID=rna-IXO1088_023385;Parent=gene-IXO1088_023385;anticodon=(pos:4761150..4761152);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_023385;product=tRNA-Arg CP040687.1 tRNAscan-SE exon 4761116 4761192 . + . ID=exon-IXO1088_023385-1;Parent=rna-IXO1088_023385;anticodon=(pos:4761150..4761152);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_023385;product=tRNA-Arg CP040687.1 Genbank gene 4761356 4762546 . + . ID=gene-IXO1088_023390;Name=IXO1088_023390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023390 CP040687.1 Protein Homology CDS 4761356 4762546 . + 0 ID=cds-QIE17576.1;Parent=gene-IXO1088_023390;Dbxref=NCBI_GP:QIE17576.1;Name=QIE17576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369992.1;locus_tag=IXO1088_023390;product=DUF4102 domain-containing protein;protein_id=QIE17576.1;transl_table=11 CP040687.1 Genbank pseudogene 4762565 4762888 . - . ID=gene-IXO1088_023395;Name=IXO1088_023395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023395;pseudo=true CP040687.1 Protein Homology CDS 4762565 4762888 . - 0 ID=cds-IXO1088_023395;Parent=gene-IXO1088_023395;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007969245.1;locus_tag=IXO1088_023395;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4763131 4763403 . + . ID=gene-IXO1088_023400;Name=IXO1088_023400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023400 CP040687.1 Protein Homology CDS 4763131 4763403 . + 0 ID=cds-QIE17577.1;Parent=gene-IXO1088_023400;Dbxref=NCBI_GP:QIE17577.1;Name=QIE17577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912600.1;locus_tag=IXO1088_023400;product=AlpA family phage regulatory protein;protein_id=QIE17577.1;transl_table=11 CP040687.1 Genbank gene 4763400 4763597 . + . ID=gene-IXO1088_023405;Name=IXO1088_023405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023405 CP040687.1 Protein Homology CDS 4763400 4763597 . + 0 ID=cds-QIE17578.1;Parent=gene-IXO1088_023405;Dbxref=NCBI_GP:QIE17578.1;Name=QIE17578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851206.1;locus_tag=IXO1088_023405;product=hypothetical protein;protein_id=QIE17578.1;transl_table=11 CP040687.1 Genbank gene 4763605 4763886 . + . ID=gene-IXO1088_023410;Name=IXO1088_023410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023410 CP040687.1 Protein Homology CDS 4763605 4763886 . + 0 ID=cds-QIE17579.1;Parent=gene-IXO1088_023410;Dbxref=NCBI_GP:QIE17579.1;Name=QIE17579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369982.1;locus_tag=IXO1088_023410;product=transcriptional regulator;protein_id=QIE17579.1;transl_table=11 CP040687.1 Genbank gene 4764180 4764389 . + . ID=gene-IXO1088_023415;Name=IXO1088_023415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023415 CP040687.1 Protein Homology CDS 4764180 4764389 . + 0 ID=cds-QIE17580.1;Parent=gene-IXO1088_023415;Dbxref=NCBI_GP:QIE17580.1;Name=QIE17580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016905092.1;locus_tag=IXO1088_023415;product=hypothetical protein;protein_id=QIE17580.1;transl_table=11 CP040687.1 Genbank gene 4764386 4764601 . + . ID=gene-IXO1088_023420;Name=IXO1088_023420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023420 CP040687.1 Protein Homology CDS 4764386 4764601 . + 0 ID=cds-QIE17581.1;Parent=gene-IXO1088_023420;Dbxref=NCBI_GP:QIE17581.1;Name=QIE17581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016905091.1;locus_tag=IXO1088_023420;product=hypothetical protein;protein_id=QIE17581.1;transl_table=11 CP040687.1 Genbank gene 4764598 4765248 . + . ID=gene-IXO1088_023425;Name=IXO1088_023425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023425 CP040687.1 Protein Homology CDS 4764598 4765248 . + 0 ID=cds-QIE17582.1;Parent=gene-IXO1088_023425;Dbxref=NCBI_GP:QIE17582.1;Name=QIE17582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851210.1;locus_tag=IXO1088_023425;product=hypothetical protein;protein_id=QIE17582.1;transl_table=11 CP040687.1 Genbank gene 4765235 4766071 . + . ID=gene-IXO1088_023430;Name=IXO1088_023430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023430 CP040687.1 Protein Homology CDS 4765235 4766071 . + 0 ID=cds-QIE17583.1;Parent=gene-IXO1088_023430;Dbxref=NCBI_GP:QIE17583.1;Name=QIE17583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851211.1;locus_tag=IXO1088_023430;product=toprim domain-containing protein;protein_id=QIE17583.1;transl_table=11 CP040687.1 Genbank gene 4766138 4767976 . + . ID=gene-IXO1088_023435;Name=IXO1088_023435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023435 CP040687.1 Protein Homology CDS 4766138 4767976 . + 0 ID=cds-QIE17584.1;Parent=gene-IXO1088_023435;Dbxref=NCBI_GP:QIE17584.1;Name=QIE17584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369966.1;locus_tag=IXO1088_023435;product=DUF927 domain-containing protein;protein_id=QIE17584.1;transl_table=11 CP040687.1 Genbank gene 4768058 4768798 . + . ID=gene-IXO1088_023440;Name=IXO1088_023440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023440 CP040687.1 Protein Homology CDS 4768058 4768798 . + 0 ID=cds-QIE17585.1;Parent=gene-IXO1088_023440;Dbxref=NCBI_GP:QIE17585.1;Name=QIE17585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904493.1;locus_tag=IXO1088_023440;product=hypothetical protein;protein_id=QIE17585.1;transl_table=11 CP040687.1 Genbank gene 4769043 4770278 . - . ID=gene-IXO1088_023445;Name=IXO1088_023445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023445 CP040687.1 Protein Homology CDS 4769043 4770278 . - 0 ID=cds-QIE17586.1;Parent=gene-IXO1088_023445;Dbxref=NCBI_GP:QIE17586.1;Name=QIE17586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1088_023445;product=ISL3 family transposase;protein_id=QIE17586.1;transl_table=11 CP040687.1 Genbank gene 4770519 4771502 . + . ID=gene-IXO1088_023450;Name=IXO1088_023450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023450 CP040687.1 Protein Homology CDS 4770519 4771502 . + 0 ID=cds-QIE17587.1;Parent=gene-IXO1088_023450;Dbxref=NCBI_GP:QIE17587.1;Name=QIE17587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003315970.1;locus_tag=IXO1088_023450;product=ATP-binding protein;protein_id=QIE17587.1;transl_table=11 CP040687.1 Genbank pseudogene 4771526 4772590 . + . ID=gene-IXO1088_023455;Name=IXO1088_023455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023455;pseudo=true CP040687.1 Protein Homology CDS 4771526 4772590 . + 0 ID=cds-IXO1088_023455;Parent=gene-IXO1088_023455;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003425897.1;locus_tag=IXO1088_023455;product=peptidase S8;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4772600 4773556 . - . ID=gene-IXO1088_023460;Name=IXO1088_023460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023460 CP040687.1 Protein Homology CDS 4772600 4773556 . - 0 ID=cds-QIE17588.1;Parent=gene-IXO1088_023460;Dbxref=NCBI_GP:QIE17588.1;Name=QIE17588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1088_023460;product=IS30-like element IS1112b family transposase;protein_id=QIE17588.1;transl_table=11 CP040687.1 Genbank pseudogene 4773652 4774986 . + . ID=gene-IXO1088_023465;Name=IXO1088_023465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023465;pseudo=true CP040687.1 Protein Homology CDS 4773652 4774986 . + 0 ID=cds-IXO1088_023465;Parent=gene-IXO1088_023465;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003425897.1;locus_tag=IXO1088_023465;product=S8 family peptidase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4777365 4778471 . + . ID=gene-IXO1088_023470;Name=IXO1088_023470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023470 CP040687.1 Protein Homology CDS 4777365 4778471 . + 0 ID=cds-QIE17589.1;Parent=gene-IXO1088_023470;Dbxref=NCBI_GP:QIE17589.1;Name=QIE17589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639242.1;locus_tag=IXO1088_023470;product=AI-2E family transporter;protein_id=QIE17589.1;transl_table=11 CP040687.1 Genbank gene 4778603 4779340 . + . ID=gene-IXO1088_023475;Name=IXO1088_023475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023475 CP040687.1 Protein Homology CDS 4778603 4779340 . + 0 ID=cds-QIE17590.1;Parent=gene-IXO1088_023475;Dbxref=NCBI_GP:QIE17590.1;Name=QIE17590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257383.1;locus_tag=IXO1088_023475;product=HAD family hydrolase;protein_id=QIE17590.1;transl_table=11 CP040687.1 Genbank gene 4779381 4780751 . + . ID=gene-IXO1088_023480;Name=IXO1088_023480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023480 CP040687.1 Protein Homology CDS 4779381 4780751 . + 0 ID=cds-QIE17591.1;Parent=gene-IXO1088_023480;Dbxref=NCBI_GP:QIE17591.1;Name=QIE17591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005989294.1;locus_tag=IXO1088_023480;product=leucyl aminopeptidase family protein;protein_id=QIE17591.1;transl_table=11 CP040687.1 Genbank pseudogene 4780805 4781553 . - . ID=gene-IXO1088_023485;Name=IXO1088_023485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023485;pseudo=true CP040687.1 Protein Homology CDS 4780805 4781553 . - 0 ID=cds-IXO1088_023485;Parent=gene-IXO1088_023485;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914350.1;locus_tag=IXO1088_023485;product=anti-sigma factor;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4781550 4782065 . - . ID=gene-IXO1088_023490;Name=IXO1088_023490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023490 CP040687.1 Protein Homology CDS 4781550 4782065 . - 0 ID=cds-QIE17592.1;Parent=gene-IXO1088_023490;Dbxref=NCBI_GP:QIE17592.1;Name=QIE17592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446300.1;locus_tag=IXO1088_023490;product=RNA polymerase sigma factor;protein_id=QIE17592.1;transl_table=11 CP040687.1 Genbank gene 4782230 4783321 . + . ID=gene-IXO1088_023495;Name=IXO1088_023495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023495 CP040687.1 Protein Homology CDS 4782230 4783321 . + 0 ID=cds-QIE17593.1;Parent=gene-IXO1088_023495;Dbxref=NCBI_GP:QIE17593.1;Name=QIE17593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914346.1;locus_tag=IXO1088_023495;product=catalase family peroxidase;protein_id=QIE17593.1;transl_table=11 CP040687.1 Genbank gene 4783318 4783851 . + . ID=gene-IXO1088_023500;Name=IXO1088_023500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023500 CP040687.1 Protein Homology CDS 4783318 4783851 . + 0 ID=cds-QIE17594.1;Parent=gene-IXO1088_023500;Dbxref=NCBI_GP:QIE17594.1;Name=QIE17594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639246.1;locus_tag=IXO1088_023500;product=cytochrome b;protein_id=QIE17594.1;transl_table=11 CP040687.1 Genbank pseudogene 4784026 4784325 . + . ID=gene-IXO1088_023505;Name=IXO1088_023505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023505;pseudo=true CP040687.1 Protein Homology CDS 4784026 4784325 . + 0 ID=cds-IXO1088_023505;Parent=gene-IXO1088_023505;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444922.1;locus_tag=IXO1088_023505;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4784552 4785667 . + . ID=gene-IXO1088_023510;Name=IXO1088_023510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023510 CP040687.1 Protein Homology CDS 4784552 4785667 . + 0 ID=cds-QIE17595.1;Parent=gene-IXO1088_023510;Dbxref=NCBI_GP:QIE17595.1;Name=QIE17595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112296.1;locus_tag=IXO1088_023510;product=alpha/beta hydrolase;protein_id=QIE17595.1;transl_table=11 CP040687.1 Genbank gene 4785747 4786655 . - . ID=gene-IXO1088_023515;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=IXO1088_023515 CP040687.1 Protein Homology CDS 4785747 4786655 . - 0 ID=cds-QIE17596.1;Parent=gene-IXO1088_023515;Dbxref=NCBI_GP:QIE17596.1;Name=QIE17596.1;gbkey=CDS;gene=rarD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639256.1;locus_tag=IXO1088_023515;product=EamA family transporter RarD;protein_id=QIE17596.1;transl_table=11 CP040687.1 Genbank pseudogene 4786652 4787526 . - . ID=gene-IXO1088_023520;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=pseudogene;locus_tag=IXO1088_023520;pseudo=true CP040687.1 Protein Homology CDS 4786652 4787526 . - 0 ID=cds-IXO1088_023520;Parent=gene-IXO1088_023520;Note=frameshifted;gbkey=CDS;gene=yedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639257.1;locus_tag=IXO1088_023520;product=drug/metabolite exporter YedA;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4787619 4788071 . + . ID=gene-IXO1088_023525;Name=IXO1088_023525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023525 CP040687.1 Protein Homology CDS 4787619 4788071 . + 0 ID=cds-QIE17597.1;Parent=gene-IXO1088_023525;Dbxref=NCBI_GP:QIE17597.1;Name=QIE17597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304468.1;locus_tag=IXO1088_023525;product=hypothetical protein;protein_id=QIE17597.1;transl_table=11 CP040687.1 Genbank pseudogene 4788471 4789270 . + . ID=gene-IXO1088_023530;Name=IXO1088_023530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023530;pseudo=true CP040687.1 Protein Homology CDS 4788471 4789270 . + 0 ID=cds-IXO1088_023530;Parent=gene-IXO1088_023530;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_023530;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4789344 4789420 . + . ID=gene-IXO1088_023535;Name=IXO1088_023535;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_023535 CP040687.1 cmsearch ncRNA 4789344 4789420 . + . ID=rna-IXO1088_023535;Parent=gene-IXO1088_023535;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_023535;product=sX9 sRNA CP040687.1 cmsearch exon 4789344 4789420 . + . ID=exon-IXO1088_023535-1;Parent=rna-IXO1088_023535;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_023535;product=sX9 sRNA CP040687.1 Genbank gene 4789425 4791152 . - . ID=gene-IXO1088_023540;Name=IXO1088_023540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023540 CP040687.1 Protein Homology CDS 4789425 4791152 . - 0 ID=cds-QIE17598.1;Parent=gene-IXO1088_023540;Dbxref=NCBI_GP:QIE17598.1;Name=QIE17598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446305.1;locus_tag=IXO1088_023540;product=M28 family peptidase;protein_id=QIE17598.1;transl_table=11 CP040687.1 Genbank gene 4791189 4791398 . + . ID=gene-IXO1088_023545;Name=IXO1088_023545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023545 CP040687.1 Protein Homology CDS 4791189 4791398 . + 0 ID=cds-QIE17599.1;Parent=gene-IXO1088_023545;Dbxref=NCBI_GP:QIE17599.1;Name=QIE17599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379244.1;locus_tag=IXO1088_023545;product=hypothetical protein;protein_id=QIE17599.1;transl_table=11 CP040687.1 Genbank gene 4791540 4792484 . - . ID=gene-IXO1088_023550;Name=IXO1088_023550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023550 CP040687.1 Protein Homology CDS 4791540 4792484 . - 0 ID=cds-QIE17600.1;Parent=gene-IXO1088_023550;Dbxref=NCBI_GP:QIE17600.1;Name=QIE17600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505028.1;locus_tag=IXO1088_023550;product=MBL fold metallo-hydrolase;protein_id=QIE17600.1;transl_table=11 CP040687.1 Genbank gene 4792615 4793904 . - . ID=gene-IXO1088_023555;Name=IXO1088_023555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023555 CP040687.1 Protein Homology CDS 4792615 4793904 . - 0 ID=cds-QIE17601.1;Parent=gene-IXO1088_023555;Dbxref=NCBI_GP:QIE17601.1;Name=QIE17601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966942.1;locus_tag=IXO1088_023555;product=tryptophan--tRNA ligase;protein_id=QIE17601.1;transl_table=11 CP040687.1 Genbank gene 4794073 4794282 . - . ID=gene-IXO1088_023560;Name=IXO1088_023560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023560 CP040687.1 Protein Homology CDS 4794073 4794282 . - 0 ID=cds-QIE17602.1;Parent=gene-IXO1088_023560;Dbxref=NCBI_GP:QIE17602.1;Name=QIE17602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486601.1;locus_tag=IXO1088_023560;product=CsbD family protein;protein_id=QIE17602.1;transl_table=11 CP040687.1 Genbank gene 4794526 4794660 . - . ID=gene-IXO1088_023565;Name=IXO1088_023565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023565 CP040687.1 Protein Homology CDS 4794526 4794660 . - 0 ID=cds-QIE17603.1;Parent=gene-IXO1088_023565;Dbxref=NCBI_GP:QIE17603.1;Name=QIE17603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904515.1;locus_tag=IXO1088_023565;product=entericidin A/B family lipoprotein;protein_id=QIE17603.1;transl_table=11 CP040687.1 Genbank gene 4794724 4794876 . - . ID=gene-IXO1088_023570;Name=IXO1088_023570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023570 CP040687.1 Protein Homology CDS 4794724 4794876 . - 0 ID=cds-QIE17604.1;Parent=gene-IXO1088_023570;Dbxref=NCBI_GP:QIE17604.1;Name=QIE17604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639265.1;locus_tag=IXO1088_023570;product=entericidin A/B family lipoprotein;protein_id=QIE17604.1;transl_table=11 CP040687.1 Genbank gene 4794984 4795907 . - . ID=gene-IXO1088_023575;Name=rocF;gbkey=Gene;gene=rocF;gene_biotype=protein_coding;locus_tag=IXO1088_023575 CP040687.1 Protein Homology CDS 4794984 4795907 . - 0 ID=cds-QIE17605.1;Parent=gene-IXO1088_023575;Dbxref=NCBI_GP:QIE17605.1;Name=QIE17605.1;gbkey=CDS;gene=rocF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639266.1;locus_tag=IXO1088_023575;product=arginase;protein_id=QIE17605.1;transl_table=11 CP040687.1 Genbank gene 4796229 4796903 . + . ID=gene-IXO1088_023580;Name=IXO1088_023580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023580 CP040687.1 Protein Homology CDS 4796229 4796903 . + 0 ID=cds-QIE17606.1;Parent=gene-IXO1088_023580;Dbxref=NCBI_GP:QIE17606.1;Name=QIE17606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257366.1;locus_tag=IXO1088_023580;product=hypothetical protein;protein_id=QIE17606.1;transl_table=11 CP040687.1 Genbank gene 4796900 4797139 . + . ID=gene-IXO1088_023585;Name=IXO1088_023585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023585 CP040687.1 Protein Homology CDS 4796900 4797139 . + 0 ID=cds-QIE17607.1;Parent=gene-IXO1088_023585;Dbxref=NCBI_GP:QIE17607.1;Name=QIE17607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257365.1;locus_tag=IXO1088_023585;product=hypothetical protein;protein_id=QIE17607.1;transl_table=11 CP040687.1 Genbank gene 4797146 4797442 . + . ID=gene-IXO1088_023590;Name=IXO1088_023590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023590 CP040687.1 Protein Homology CDS 4797146 4797442 . + 0 ID=cds-QIE17608.1;Parent=gene-IXO1088_023590;Dbxref=NCBI_GP:QIE17608.1;Name=QIE17608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446308.1;locus_tag=IXO1088_023590;product=hypothetical protein;protein_id=QIE17608.1;transl_table=11 CP040687.1 Genbank pseudogene 4797628 4797962 . - . ID=gene-IXO1088_023595;Name=IXO1088_023595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023595;pseudo=true CP040687.1 Protein Homology CDS 4797628 4797962 . - 0 ID=cds-IXO1088_023595;Parent=gene-IXO1088_023595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374888.1;locus_tag=IXO1088_023595;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4797922 4798605 . + . ID=gene-IXO1088_023600;Name=IXO1088_023600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023600 CP040687.1 Protein Homology CDS 4797922 4798605 . + 0 ID=cds-QIE17609.1;Parent=gene-IXO1088_023600;Dbxref=NCBI_GP:QIE17609.1;Name=QIE17609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639271.1;locus_tag=IXO1088_023600;product=dTMP kinase;protein_id=QIE17609.1;transl_table=11 CP040687.1 Genbank gene 4799296 4799371 . - . ID=gene-IXO1088_023605;Name=IXO1088_023605;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_023605 CP040687.1 tRNAscan-SE tRNA 4799296 4799371 . - . ID=rna-IXO1088_023605;Parent=gene-IXO1088_023605;anticodon=(pos:complement(4799336..4799338));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_023605;product=tRNA-Thr CP040687.1 tRNAscan-SE exon 4799296 4799371 . - . ID=exon-IXO1088_023605-1;Parent=rna-IXO1088_023605;anticodon=(pos:complement(4799336..4799338));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_023605;product=tRNA-Thr CP040687.1 Genbank gene 4799404 4800324 . - . ID=gene-IXO1088_023610;Name=IXO1088_023610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023610 CP040687.1 Protein Homology CDS 4799404 4800324 . - 0 ID=cds-QIE17610.1;Parent=gene-IXO1088_023610;Dbxref=NCBI_GP:QIE17610.1;Name=QIE17610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112291.1;locus_tag=IXO1088_023610;product=SPOR domain-containing protein;protein_id=QIE17610.1;transl_table=11 CP040687.1 Genbank gene 4800334 4801062 . - . ID=gene-IXO1088_023615;Name=IXO1088_023615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023615 CP040687.1 Protein Homology CDS 4800334 4801062 . - 0 ID=cds-QIE17611.1;Parent=gene-IXO1088_023615;Dbxref=NCBI_GP:QIE17611.1;Name=QIE17611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639276.1;locus_tag=IXO1088_023615;product=type III pantothenate kinase;protein_id=QIE17611.1;transl_table=11 CP040687.1 Genbank gene 4801059 4802024 . - . ID=gene-IXO1088_023620;Name=IXO1088_023620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023620 CP040687.1 Protein Homology CDS 4801059 4802024 . - 0 ID=cds-QIE18133.1;Parent=gene-IXO1088_023620;Dbxref=NCBI_GP:QIE18133.1;Name=QIE18133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639277.1;locus_tag=IXO1088_023620;product=bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor;protein_id=QIE18133.1;transl_table=11 CP040687.1 Genbank gene 4802382 4802693 . + . ID=gene-IXO1088_023625;Name=IXO1088_023625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023625 CP040687.1 Protein Homology CDS 4802382 4802693 . + 0 ID=cds-QIE17612.1;Parent=gene-IXO1088_023625;Dbxref=NCBI_GP:QIE17612.1;Name=QIE17612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154908.1;locus_tag=IXO1088_023625;product=hypothetical protein;protein_id=QIE17612.1;transl_table=11 CP040687.1 Genbank pseudogene 4802702 4803457 . + . ID=gene-IXO1088_023630;Name=IXO1088_023630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023630;pseudo=true CP040687.1 Protein Homology CDS 4802702 4803457 . + 0 ID=cds-IXO1088_023630;Parent=gene-IXO1088_023630;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966931.1;locus_tag=IXO1088_023630;product=zinc-dependent peptidase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4803610 4804794 . - . ID=gene-IXO1088_023635;Name=IXO1088_023635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023635 CP040687.1 Protein Homology CDS 4803610 4804794 . - 0 ID=cds-QIE17613.1;Parent=gene-IXO1088_023635;Dbxref=NCBI_GP:QIE17613.1;Name=QIE17613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639279.1;locus_tag=IXO1088_023635;product=DUF1501 domain-containing protein;protein_id=QIE17613.1;transl_table=11 CP040687.1 Genbank gene 4804914 4806503 . - . ID=gene-IXO1088_023640;Name=IXO1088_023640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023640 CP040687.1 Protein Homology CDS 4804914 4806503 . - 0 ID=cds-QIE17614.1;Parent=gene-IXO1088_023640;Dbxref=NCBI_GP:QIE17614.1;Name=QIE17614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154911.1;locus_tag=IXO1088_023640;product=DUF1800 domain-containing protein;protein_id=QIE17614.1;transl_table=11 CP040687.1 Genbank gene 4806624 4808039 . - . ID=gene-IXO1088_023645;Name=IXO1088_023645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023645 CP040687.1 Protein Homology CDS 4806624 4808039 . - 0 ID=cds-QIE17615.1;Parent=gene-IXO1088_023645;Dbxref=NCBI_GP:QIE17615.1;Name=QIE17615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639281.1;locus_tag=IXO1088_023645;product=two-component sensor histidine kinase;protein_id=QIE17615.1;transl_table=11 CP040687.1 Genbank gene 4808069 4808752 . - . ID=gene-IXO1088_023650;Name=IXO1088_023650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023650 CP040687.1 Protein Homology CDS 4808069 4808752 . - 0 ID=cds-QIE17616.1;Parent=gene-IXO1088_023650;Dbxref=NCBI_GP:QIE17616.1;Name=QIE17616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639282.1;locus_tag=IXO1088_023650;product=response regulator transcription factor;protein_id=QIE17616.1;transl_table=11 CP040687.1 Genbank gene 4808824 4809126 . - . ID=gene-IXO1088_023655;Name=IXO1088_023655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023655 CP040687.1 Protein Homology CDS 4808824 4809126 . - 0 ID=cds-QIE17617.1;Parent=gene-IXO1088_023655;Dbxref=NCBI_GP:QIE17617.1;Name=QIE17617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379215.1;locus_tag=IXO1088_023655;product=hypothetical protein;protein_id=QIE17617.1;transl_table=11 CP040687.1 Genbank gene 4809462 4810466 . - . ID=gene-IXO1088_023660;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=IXO1088_023660 CP040687.1 Protein Homology CDS 4809462 4810466 . - 0 ID=cds-QIE17618.1;Parent=gene-IXO1088_023660;Dbxref=NCBI_GP:QIE17618.1;Name=QIE17618.1;gbkey=CDS;gene=dusA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916500.1;locus_tag=IXO1088_023660;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=QIE17618.1;transl_table=11 CP040687.1 Genbank pseudogene 4810577 4810902 . + . ID=gene-IXO1088_023665;Name=IXO1088_023665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023665;pseudo=true CP040687.1 Protein Homology CDS 4810577 4810902 . + 0 ID=cds-IXO1088_023665;Parent=gene-IXO1088_023665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005989367.1;locus_tag=IXO1088_023665;product=NIPSNAP family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4810929 4811123 . - . ID=gene-IXO1088_023670;Name=IXO1088_023670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023670 CP040687.1 Protein Homology CDS 4810929 4811123 . - 0 ID=cds-QIE17619.1;Parent=gene-IXO1088_023670;Dbxref=NCBI_GP:QIE17619.1;Name=QIE17619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052681.1;locus_tag=IXO1088_023670;product=hypothetical protein;protein_id=QIE17619.1;transl_table=11 CP040687.1 Genbank pseudogene 4811171 4811420 . + . ID=gene-IXO1088_023675;Name=IXO1088_023675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023675;pseudo=true CP040687.1 Protein Homology CDS 4811171 4811420 . + 0 ID=cds-IXO1088_023675;Parent=gene-IXO1088_023675;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052682.1;locus_tag=IXO1088_023675;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4811874 4812449 . - . ID=gene-IXO1088_023680;Name=IXO1088_023680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023680 CP040687.1 Protein Homology CDS 4811874 4812449 . - 0 ID=cds-QIE17620.1;Parent=gene-IXO1088_023680;Dbxref=NCBI_GP:QIE17620.1;Name=QIE17620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374921.1;locus_tag=IXO1088_023680;product=ankyrin repeat domain-containing protein;protein_id=QIE17620.1;transl_table=11 CP040687.1 Genbank gene 4812508 4814031 . - . ID=gene-IXO1088_023685;Name=IXO1088_023685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023685 CP040687.1 Protein Homology CDS 4812508 4814031 . - 0 ID=cds-QIE17621.1;Parent=gene-IXO1088_023685;Dbxref=NCBI_GP:QIE17621.1;Name=QIE17621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639288.1;locus_tag=IXO1088_023685;product=catalase;protein_id=QIE17621.1;transl_table=11 CP040687.1 Genbank gene 4814722 4815192 . - . ID=gene-IXO1088_023690;Name=IXO1088_023690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023690 CP040687.1 Protein Homology CDS 4814722 4815192 . - 0 ID=cds-QIE17622.1;Parent=gene-IXO1088_023690;Dbxref=NCBI_GP:QIE17622.1;Name=QIE17622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257349.1;locus_tag=IXO1088_023690;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=QIE17622.1;transl_table=11 CP040687.1 Genbank gene 4815154 4815342 . + . ID=gene-IXO1088_023695;Name=IXO1088_023695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023695 CP040687.1 Protein Homology CDS 4815154 4815342 . + 0 ID=cds-QIE17623.1;Parent=gene-IXO1088_023695;Dbxref=NCBI_GP:QIE17623.1;Name=QIE17623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505050.1;locus_tag=IXO1088_023695;product=hypothetical protein;protein_id=QIE17623.1;transl_table=11 CP040687.1 Genbank gene 4815355 4816320 . - . ID=gene-IXO1088_023700;Name=IXO1088_023700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023700 CP040687.1 Protein Homology CDS 4815355 4816320 . - 0 ID=cds-QIE17624.1;Parent=gene-IXO1088_023700;Dbxref=NCBI_GP:QIE17624.1;Name=QIE17624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_023700;product=IS1595 family transposase;protein_id=QIE17624.1;transl_table=11 CP040687.1 Genbank gene 4816403 4816669 . - . ID=gene-IXO1088_023705;Name=IXO1088_023705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023705 CP040687.1 Protein Homology CDS 4816403 4816669 . - 0 ID=cds-QIE18134.1;Parent=gene-IXO1088_023705;Dbxref=NCBI_GP:QIE18134.1;Name=QIE18134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407399.1;locus_tag=IXO1088_023705;product=hypothetical protein;protein_id=QIE18134.1;transl_table=11 CP040687.1 Genbank gene 4816943 4819075 . - . ID=gene-IXO1088_023710;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=IXO1088_023710 CP040687.1 Protein Homology CDS 4816943 4819075 . - 0 ID=cds-QIE17625.1;Parent=gene-IXO1088_023710;Dbxref=NCBI_GP:QIE17625.1;Name=QIE17625.1;gbkey=CDS;gene=dinG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639289.1;locus_tag=IXO1088_023710;product=ATP-dependent DNA helicase DinG;protein_id=QIE17625.1;transl_table=11 CP040687.1 Genbank gene 4819537 4819923 . - . ID=gene-IXO1088_023715;Name=IXO1088_023715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023715 CP040687.1 Protein Homology CDS 4819537 4819923 . - 0 ID=cds-QIE17626.1;Parent=gene-IXO1088_023715;Dbxref=NCBI_GP:QIE17626.1;Name=QIE17626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505055.1;locus_tag=IXO1088_023715;product=hypothetical protein;protein_id=QIE17626.1;transl_table=11 CP040687.1 Genbank gene 4819925 4820776 . - . ID=gene-IXO1088_023720;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=IXO1088_023720 CP040687.1 Protein Homology CDS 4819925 4820776 . - 0 ID=cds-QIE17627.1;Parent=gene-IXO1088_023720;Dbxref=NCBI_GP:QIE17627.1;Name=QIE17627.1;gbkey=CDS;gene=aroE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639292.1;locus_tag=IXO1088_023720;product=shikimate dehydrogenase;protein_id=QIE17627.1;transl_table=11 CP040687.1 Genbank gene 4820829 4821710 . + . ID=gene-IXO1088_023725;Name=IXO1088_023725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023725 CP040687.1 Protein Homology CDS 4820829 4821710 . + 0 ID=cds-QIE17628.1;Parent=gene-IXO1088_023725;Dbxref=NCBI_GP:QIE17628.1;Name=QIE17628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156261.1;locus_tag=IXO1088_023725;product=TolB-like protein;protein_id=QIE17628.1;transl_table=11 CP040687.1 Genbank gene 4822148 4822224 . - . ID=gene-IXO1088_023730;Name=IXO1088_023730;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_023730 CP040687.1 cmsearch ncRNA 4822148 4822224 . - . ID=rna-IXO1088_023730;Parent=gene-IXO1088_023730;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_023730;product=sX9 sRNA CP040687.1 cmsearch exon 4822148 4822224 . - . ID=exon-IXO1088_023730-1;Parent=rna-IXO1088_023730;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_023730;product=sX9 sRNA CP040687.1 Genbank gene 4822333 4824867 . - . ID=gene-IXO1088_023735;Name=IXO1088_023735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023735 CP040687.1 Protein Homology CDS 4822333 4824867 . - 0 ID=cds-QIE17629.1;Parent=gene-IXO1088_023735;Dbxref=NCBI_GP:QIE17629.1;Name=QIE17629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639294.1;locus_tag=IXO1088_023735;product=iron-uptake factor;protein_id=QIE17629.1;transl_table=11 CP040687.1 Genbank gene 4825101 4825853 . + . ID=gene-IXO1088_023740;Name=IXO1088_023740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023740 CP040687.1 Protein Homology CDS 4825101 4825853 . + 0 ID=cds-QIE17630.1;Parent=gene-IXO1088_023740;Dbxref=NCBI_GP:QIE17630.1;Name=QIE17630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407395.1;locus_tag=IXO1088_023740;product=DNA/RNA non-specific endonuclease;protein_id=QIE17630.1;transl_table=11 CP040687.1 Genbank gene 4825981 4826895 . - . ID=gene-IXO1088_023745;Name=IXO1088_023745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023745 CP040687.1 Protein Homology CDS 4825981 4826895 . - 0 ID=cds-QIE17631.1;Parent=gene-IXO1088_023745;Dbxref=NCBI_GP:QIE17631.1;Name=QIE17631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369930.1;locus_tag=IXO1088_023745;product=LysR family transcriptional regulator;protein_id=QIE17631.1;transl_table=11 CP040687.1 Genbank pseudogene 4826988 4827980 . + . ID=gene-IXO1088_023750;Name=IXO1088_023750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023750;pseudo=true CP040687.1 Protein Homology CDS 4826988 4827980 . + 0 ID=cds-IXO1088_023750;Parent=gene-IXO1088_023750;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117813.1;locus_tag=IXO1088_023750;product=NAD-dependent epimerase/dehydratase family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4828047 4828123 . + . ID=gene-IXO1088_023755;Name=IXO1088_023755;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_023755 CP040687.1 cmsearch ncRNA 4828047 4828123 . + . ID=rna-IXO1088_023755;Parent=gene-IXO1088_023755;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_023755;product=sX9 sRNA CP040687.1 cmsearch exon 4828047 4828123 . + . ID=exon-IXO1088_023755-1;Parent=rna-IXO1088_023755;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_023755;product=sX9 sRNA CP040687.1 Genbank gene 4828168 4829160 . - . ID=gene-IXO1088_023760;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=IXO1088_023760 CP040687.1 Protein Homology CDS 4828168 4829160 . - 0 ID=cds-QIE17632.1;Parent=gene-IXO1088_023760;Dbxref=NCBI_GP:QIE17632.1;Name=QIE17632.1;gbkey=CDS;gene=hemB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303747.1;locus_tag=IXO1088_023760;product=porphobilinogen synthase;protein_id=QIE17632.1;transl_table=11 CP040687.1 Genbank pseudogene 4829384 4829629 . - . ID=gene-IXO1088_023765;Name=IXO1088_023765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023765;pseudo=true CP040687.1 Protein Homology CDS 4829384 4829629 . - 0 ID=cds-IXO1088_023765;Parent=gene-IXO1088_023765;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002808470.1;locus_tag=IXO1088_023765;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4829825 4830283 . + . ID=gene-IXO1088_023770;Name=IXO1088_023770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023770 CP040687.1 Protein Homology CDS 4829825 4830283 . + 0 ID=cds-QIE17633.1;Parent=gene-IXO1088_023770;Dbxref=NCBI_GP:QIE17633.1;Name=QIE17633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171777.1;locus_tag=IXO1088_023770;product=hypothetical protein;protein_id=QIE17633.1;transl_table=11 CP040687.1 Genbank gene 4830384 4832174 . - . ID=gene-IXO1088_023775;Name=IXO1088_023775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023775 CP040687.1 Protein Homology CDS 4830384 4832174 . - 0 ID=cds-QIE17634.1;Parent=gene-IXO1088_023775;Dbxref=NCBI_GP:QIE17634.1;Name=QIE17634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158571.1;locus_tag=IXO1088_023775;product=DUF885 domain-containing protein;protein_id=QIE17634.1;transl_table=11 CP040687.1 Genbank gene 4832302 4832374 . + . ID=gene-IXO1088_023780;Name=IXO1088_023780;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_023780 CP040687.1 cmsearch ncRNA 4832302 4832374 . + . ID=rna-IXO1088_023780;Parent=gene-IXO1088_023780;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_023780;product=sX9 sRNA CP040687.1 cmsearch exon 4832302 4832374 . + . ID=exon-IXO1088_023780-1;Parent=rna-IXO1088_023780;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_023780;product=sX9 sRNA CP040687.1 Genbank gene 4832383 4834620 . - . ID=gene-IXO1088_023785;Name=IXO1088_023785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023785 CP040687.1 Protein Homology CDS 4832383 4834620 . - 0 ID=cds-QIE17635.1;Parent=gene-IXO1088_023785;Dbxref=NCBI_GP:QIE17635.1;Name=QIE17635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257331.1;locus_tag=IXO1088_023785;product=S9 family peptidase;protein_id=QIE17635.1;transl_table=11 CP040687.1 Genbank pseudogene 4834828 4834965 . + . ID=gene-IXO1088_023790;Name=IXO1088_023790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023790;pseudo=true CP040687.1 Protein Homology CDS 4834828 4834965 . + 0 ID=cds-IXO1088_023790;Parent=gene-IXO1088_023790;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259286.1;locus_tag=IXO1088_023790;product=SufE family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4835045 4835734 . - . ID=gene-IXO1088_023795;Name=IXO1088_023795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023795 CP040687.1 Protein Homology CDS 4835045 4835734 . - 0 ID=cds-QIE17636.1;Parent=gene-IXO1088_023795;Dbxref=NCBI_GP:QIE17636.1;Name=QIE17636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639301.1;locus_tag=IXO1088_023795;product=glutathione S-transferase;protein_id=QIE17636.1;transl_table=11 CP040687.1 Genbank gene 4836124 4839138 . + . ID=gene-IXO1088_023800;Name=IXO1088_023800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023800 CP040687.1 Protein Homology CDS 4836124 4839138 . + 0 ID=cds-QIE18135.1;Parent=gene-IXO1088_023800;Dbxref=NCBI_GP:QIE18135.1;Name=QIE18135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639302.1;locus_tag=IXO1088_023800;product=TonB-dependent receptor;protein_id=QIE18135.1;transl_table=11 CP040687.1 Genbank gene 4839322 4840023 . + . ID=gene-IXO1088_023805;Name=IXO1088_023805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023805 CP040687.1 Protein Homology CDS 4839322 4840023 . + 0 ID=cds-QIE17637.1;Parent=gene-IXO1088_023805;Dbxref=NCBI_GP:QIE17637.1;Name=QIE17637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407388.1;locus_tag=IXO1088_023805;product=SapC family protein;protein_id=QIE17637.1;transl_table=11 CP040687.1 Genbank gene 4840013 4841026 . + . ID=gene-IXO1088_023810;Name=IXO1088_023810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023810 CP040687.1 Protein Homology CDS 4840013 4841026 . + 0 ID=cds-QIE17638.1;Parent=gene-IXO1088_023810;Dbxref=NCBI_GP:QIE17638.1;Name=QIE17638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639304.1;locus_tag=IXO1088_023810;product=cupin-like domain-containing protein;protein_id=QIE17638.1;transl_table=11 CP040687.1 Genbank gene 4841037 4842602 . + . ID=gene-IXO1088_023815;Name=IXO1088_023815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023815 CP040687.1 Protein Homology CDS 4841037 4842602 . + 0 ID=cds-QIE17639.1;Parent=gene-IXO1088_023815;Dbxref=NCBI_GP:QIE17639.1;Name=QIE17639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965065.1;locus_tag=IXO1088_023815;product=tryptophan 7-halogenase;protein_id=QIE17639.1;transl_table=11 CP040687.1 Genbank gene 4842742 4843764 . + . ID=gene-IXO1088_023820;Name=IXO1088_023820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023820 CP040687.1 Protein Homology CDS 4842742 4843764 . + 0 ID=cds-QIE17640.1;Parent=gene-IXO1088_023820;Dbxref=NCBI_GP:QIE17640.1;Name=QIE17640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156276.1;locus_tag=IXO1088_023820;product=energy transducer TonB;protein_id=QIE17640.1;transl_table=11 CP040687.1 Genbank gene 4844173 4845366 . - . ID=gene-IXO1088_023825;Name=IXO1088_023825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023825 CP040687.1 Protein Homology CDS 4844173 4845366 . - 0 ID=cds-QIE17641.1;Parent=gene-IXO1088_023825;Dbxref=NCBI_GP:QIE17641.1;Name=QIE17641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639307.1;locus_tag=IXO1088_023825;product=ABC transporter permease;protein_id=QIE17641.1;transl_table=11 CP040687.1 Genbank gene 4845363 4846109 . - . ID=gene-IXO1088_023830;Name=IXO1088_023830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023830 CP040687.1 Protein Homology CDS 4845363 4846109 . - 0 ID=cds-QIE17642.1;Parent=gene-IXO1088_023830;Dbxref=NCBI_GP:QIE17642.1;Name=QIE17642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011039041.1;locus_tag=IXO1088_023830;product=ATP-binding cassette domain-containing protein;protein_id=QIE17642.1;transl_table=11 CP040687.1 Genbank gene 4846141 4847742 . - . ID=gene-IXO1088_023835;Name=IXO1088_023835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023835 CP040687.1 Protein Homology CDS 4846141 4847742 . - 0 ID=cds-QIE17643.1;Parent=gene-IXO1088_023835;Dbxref=NCBI_GP:QIE17643.1;Name=QIE17643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849961.1;locus_tag=IXO1088_023835;product=alpha/beta fold hydrolase;protein_id=QIE17643.1;transl_table=11 CP040687.1 Genbank gene 4847803 4848003 . - . ID=gene-IXO1088_023840;Name=IXO1088_023840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023840 CP040687.1 Protein Homology CDS 4847803 4848003 . - 0 ID=cds-QIE17644.1;Parent=gene-IXO1088_023840;Dbxref=NCBI_GP:QIE17644.1;Name=QIE17644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639310.1;locus_tag=IXO1088_023840;product=helix-turn-helix transcriptional regulator;protein_id=QIE17644.1;transl_table=11 CP040687.1 Genbank gene 4848000 4848587 . - . ID=gene-IXO1088_023845;Name=IXO1088_023845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023845 CP040687.1 Protein Homology CDS 4848000 4848587 . - 0 ID=cds-QIE17645.1;Parent=gene-IXO1088_023845;Dbxref=NCBI_GP:QIE17645.1;Name=QIE17645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156281.1;locus_tag=IXO1088_023845;product=hypothetical protein;protein_id=QIE17645.1;transl_table=11 CP040687.1 Genbank gene 4849073 4849345 . - . ID=gene-IXO1088_023850;Name=IXO1088_023850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023850 CP040687.1 Protein Homology CDS 4849073 4849345 . - 0 ID=cds-QIE17646.1;Parent=gene-IXO1088_023850;Dbxref=NCBI_GP:QIE17646.1;Name=QIE17646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639312.1;locus_tag=IXO1088_023850;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=QIE17646.1;transl_table=11 CP040687.1 Genbank gene 4849411 4850400 . + . ID=gene-IXO1088_023855;Name=dmeF;gbkey=Gene;gene=dmeF;gene_biotype=protein_coding;locus_tag=IXO1088_023855 CP040687.1 Protein Homology CDS 4849411 4850400 . + 0 ID=cds-QIE17647.1;Parent=gene-IXO1088_023855;Dbxref=NCBI_GP:QIE17647.1;Name=QIE17647.1;gbkey=CDS;gene=dmeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112280.1;locus_tag=IXO1088_023855;product=CDF family Co(II)/Ni(II) efflux transporter DmeF;protein_id=QIE17647.1;transl_table=11 CP040687.1 Genbank gene 4850485 4851246 . - . ID=gene-IXO1088_023860;Name=IXO1088_023860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023860 CP040687.1 Protein Homology CDS 4850485 4851246 . - 0 ID=cds-QIE17648.1;Parent=gene-IXO1088_023860;Dbxref=NCBI_GP:QIE17648.1;Name=QIE17648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052710.1;locus_tag=IXO1088_023860;product=ferredoxin--NADP reductase;protein_id=QIE17648.1;transl_table=11 CP040687.1 Genbank gene 4851349 4852344 . + . ID=gene-IXO1088_023865;Name=IXO1088_023865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023865 CP040687.1 Protein Homology CDS 4851349 4852344 . + 0 ID=cds-QIE17649.1;Parent=gene-IXO1088_023865;Dbxref=NCBI_GP:QIE17649.1;Name=QIE17649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639316.1;locus_tag=IXO1088_023865;product=ABC transporter ATP-binding protein;protein_id=QIE17649.1;transl_table=11 CP040687.1 Genbank gene 4852362 4853153 . + . ID=gene-IXO1088_023870;Name=IXO1088_023870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023870 CP040687.1 Protein Homology CDS 4852362 4853153 . + 0 ID=cds-QIE17650.1;Parent=gene-IXO1088_023870;Dbxref=NCBI_GP:QIE17650.1;Name=QIE17650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639317.1;locus_tag=IXO1088_023870;product=ABC transporter permease;protein_id=QIE17650.1;transl_table=11 CP040687.1 Genbank gene 4853156 4853905 . + . ID=gene-IXO1088_023875;Name=IXO1088_023875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023875 CP040687.1 Protein Homology CDS 4853156 4853905 . + 0 ID=cds-QIE17651.1;Parent=gene-IXO1088_023875;Dbxref=NCBI_GP:QIE17651.1;Name=QIE17651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446344.1;locus_tag=IXO1088_023875;product=DUF3800 domain-containing protein;protein_id=QIE17651.1;transl_table=11 CP040687.1 Genbank pseudogene 4854024 4854359 . + . ID=gene-IXO1088_023880;Name=IXO1088_023880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023880;pseudo=true CP040687.1 Protein Homology CDS 4854024 4854359 . + 0 ID=cds-IXO1088_023880;Parent=gene-IXO1088_023880;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639319.1;locus_tag=IXO1088_023880;product=oxidoreductase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4854423 4855658 . + . ID=gene-IXO1088_023885;Name=IXO1088_023885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023885 CP040687.1 Protein Homology CDS 4854423 4855658 . + 0 ID=cds-QIE17652.1;Parent=gene-IXO1088_023885;Dbxref=NCBI_GP:QIE17652.1;Name=QIE17652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1088_023885;product=ISL3-like element ISXoo13 family transposase;protein_id=QIE17652.1;transl_table=11 CP040687.1 Genbank pseudogene 4855674 4856282 . + . ID=gene-IXO1088_023890;Name=IXO1088_023890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023890;pseudo=true CP040687.1 Protein Homology CDS 4855674 4856282 . + 0 ID=cds-IXO1088_023890;Parent=gene-IXO1088_023890;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639319.1;locus_tag=IXO1088_023890;product=oxidoreductase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4856282 4856464 . + . ID=gene-IXO1088_023895;Name=IXO1088_023895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023895 CP040687.1 Protein Homology CDS 4856282 4856464 . + 0 ID=cds-QIE17653.1;Parent=gene-IXO1088_023895;Dbxref=NCBI_GP:QIE17653.1;Name=QIE17653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504846.1;locus_tag=IXO1088_023895;product=hypothetical protein;protein_id=QIE17653.1;transl_table=11 CP040687.1 Genbank pseudogene 4856396 4856619 . - . ID=gene-IXO1088_023900;Name=IXO1088_023900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023900;pseudo=true CP040687.1 Protein Homology CDS 4856396 4856619 . - 0 ID=cds-IXO1088_023900;Parent=gene-IXO1088_023900;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472063.1;locus_tag=IXO1088_023900;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4856709 4857944 . - . ID=gene-IXO1088_023905;Name=IXO1088_023905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023905 CP040687.1 Protein Homology CDS 4856709 4857944 . - 0 ID=cds-QIE17654.1;Parent=gene-IXO1088_023905;Dbxref=NCBI_GP:QIE17654.1;Name=QIE17654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1088_023905;product=ISL3-like element ISXoo13 family transposase;protein_id=QIE17654.1;transl_table=11 CP040687.1 Genbank gene 4857997 4859154 . - . ID=gene-IXO1088_023910;Name=IXO1088_023910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023910 CP040687.1 Protein Homology CDS 4857997 4859154 . - 0 ID=cds-QIE18136.1;Parent=gene-IXO1088_023910;Dbxref=NCBI_GP:QIE18136.1;Name=QIE18136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611322.1;locus_tag=IXO1088_023910;product=IS5-like element ISXoo14 family transposase;protein_id=QIE18136.1;transl_table=11 CP040687.1 Genbank pseudogene 4859319 4860158 . + . ID=gene-IXO1088_023915;Name=IXO1088_023915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023915;pseudo=true CP040687.1 Protein Homology CDS 4859319 4860158 . + 0 ID=cds-IXO1088_023915;Parent=gene-IXO1088_023915;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_023915;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4860245 4861210 . + . ID=gene-IXO1088_023920;Name=IXO1088_023920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023920;pseudo=true CP040687.1 Protein Homology CDS 4860245 4861210 . + 0 ID=cds-IXO1088_023920;Parent=gene-IXO1088_023920;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_023920;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4861216 4861704 . + . ID=gene-IXO1088_023925;Name=IXO1088_023925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023925;pseudo=true CP040687.1 Protein Homology CDS 4861216 4861704 . + 0 ID=cds-IXO1088_023925;Parent=gene-IXO1088_023925;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_023925;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4861788 4862889 . - . ID=gene-IXO1088_023930;Name=IXO1088_023930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023930 CP040687.1 Protein Homology CDS 4862639 4862889 . - 0 ID=cds-QIE17655.1;Parent=gene-IXO1088_023930;Dbxref=NCBI_GP:QIE17655.1;Name=QIE17655.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=IXO1088_023930;product=IS3 family transposase;protein_id=QIE17655.1;transl_table=11 CP040687.1 Protein Homology CDS 4861788 4862640 . - 1 ID=cds-QIE17655.1;Parent=gene-IXO1088_023930;Dbxref=NCBI_GP:QIE17655.1;Name=QIE17655.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=IXO1088_023930;product=IS3 family transposase;protein_id=QIE17655.1;transl_table=11 CP040687.1 Genbank pseudogene 4862959 4863249 . - . ID=gene-IXO1088_023935;Name=IXO1088_023935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023935;pseudo=true CP040687.1 Protein Homology CDS 4862959 4863249 . - 0 ID=cds-IXO1088_023935;Parent=gene-IXO1088_023935;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369846.1;locus_tag=IXO1088_023935;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4863650 4864413 . + . ID=gene-IXO1088_023940;Name=IXO1088_023940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023940 CP040687.1 Protein Homology CDS 4863650 4863965 . + 0 ID=cds-QIE17656.1;Parent=gene-IXO1088_023940;Dbxref=NCBI_GP:QIE17656.1;Name=QIE17656.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_023940;product=IS5 family transposase;protein_id=QIE17656.1;transl_table=11 CP040687.1 Protein Homology CDS 4863965 4864413 . + 2 ID=cds-QIE17656.1;Parent=gene-IXO1088_023940;Dbxref=NCBI_GP:QIE17656.1;Name=QIE17656.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_023940;product=IS5 family transposase;protein_id=QIE17656.1;transl_table=11 CP040687.1 Genbank gene 4864473 4865271 . + . ID=gene-IXO1088_023945;Name=IXO1088_023945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023945 CP040687.1 Protein Homology CDS 4864473 4864744 . + 0 ID=cds-QIE17657.1;Parent=gene-IXO1088_023945;Dbxref=NCBI_GP:QIE17657.1;Name=QIE17657.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_023945;product=IS5 family transposase;protein_id=QIE17657.1;transl_table=11 CP040687.1 Protein Homology CDS 4864743 4865271 . + 1 ID=cds-QIE17657.1;Parent=gene-IXO1088_023945;Dbxref=NCBI_GP:QIE17657.1;Name=QIE17657.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_023945;product=IS5 family transposase;protein_id=QIE17657.1;transl_table=11 CP040687.1 Genbank gene 4865344 4865420 . + . ID=gene-IXO1088_023950;Name=IXO1088_023950;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_023950 CP040687.1 cmsearch ncRNA 4865344 4865420 . + . ID=rna-IXO1088_023950;Parent=gene-IXO1088_023950;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_023950;product=sX9 sRNA CP040687.1 cmsearch exon 4865344 4865420 . + . ID=exon-IXO1088_023950-1;Parent=rna-IXO1088_023950;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_023950;product=sX9 sRNA CP040687.1 Genbank gene 4865623 4865907 . - . ID=gene-IXO1088_023955;Name=IXO1088_023955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023955 CP040687.1 Protein Homology CDS 4865623 4865907 . - 0 ID=cds-QIE17658.1;Parent=gene-IXO1088_023955;Dbxref=NCBI_GP:QIE17658.1;Name=QIE17658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012444053.1;locus_tag=IXO1088_023955;product=hypothetical protein;protein_id=QIE17658.1;transl_table=11 CP040687.1 Genbank pseudogene 4866406 4867760 . + . ID=gene-IXO1088_023960;Name=IXO1088_023960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023960;pseudo=true CP040687.1 Protein Homology CDS 4866406 4867760 . + 0 ID=cds-IXO1088_023960;Parent=gene-IXO1088_023960;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1088_023960;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4867771 4868025 . - . ID=gene-IXO1088_023965;Name=IXO1088_023965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_023965;pseudo=true CP040687.1 Protein Homology CDS 4867771 4868025 . - 0 ID=cds-IXO1088_023965;Parent=gene-IXO1088_023965;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370546.1;locus_tag=IXO1088_023965;product=acetyltransferase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4868254 4869363 . - . ID=gene-IXO1088_023970;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=IXO1088_023970 CP040687.1 Protein Homology CDS 4868254 4869363 . - 0 ID=cds-QIE17659.1;Parent=gene-IXO1088_023970;Dbxref=NCBI_GP:QIE17659.1;Name=QIE17659.1;gbkey=CDS;gene=ddlA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379859.1;locus_tag=IXO1088_023970;product=D-alanine--D-alanine ligase;protein_id=QIE17659.1;transl_table=11 CP040687.1 Genbank gene 4869394 4869588 . + . ID=gene-IXO1088_023975;Name=IXO1088_023975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023975 CP040687.1 Protein Homology CDS 4869394 4869588 . + 0 ID=cds-QIE17660.1;Parent=gene-IXO1088_023975;Dbxref=NCBI_GP:QIE17660.1;Name=QIE17660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501541.1;locus_tag=IXO1088_023975;product=hypothetical protein;protein_id=QIE17660.1;transl_table=11 CP040687.1 Genbank gene 4869598 4870242 . + . ID=gene-IXO1088_023980;Name=IXO1088_023980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023980 CP040687.1 Protein Homology CDS 4869598 4870242 . + 0 ID=cds-QIE17661.1;Parent=gene-IXO1088_023980;Dbxref=NCBI_GP:QIE17661.1;Name=QIE17661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488942.1;locus_tag=IXO1088_023980;product=SCP2 domain-containing protein;protein_id=QIE17661.1;transl_table=11 CP040687.1 Genbank gene 4870239 4871912 . + . ID=gene-IXO1088_023985;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=IXO1088_023985 CP040687.1 Protein Homology CDS 4870239 4871912 . + 0 ID=cds-QIE17662.1;Parent=gene-IXO1088_023985;Dbxref=NCBI_GP:QIE17662.1;Name=QIE17662.1;gbkey=CDS;gene=ubiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635619.1;locus_tag=IXO1088_023985;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=QIE17662.1;transl_table=11 CP040687.1 Genbank gene 4872026 4872415 . + . ID=gene-IXO1088_023990;Name=IXO1088_023990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023990 CP040687.1 Protein Homology CDS 4872026 4872415 . + 0 ID=cds-QIE17663.1;Parent=gene-IXO1088_023990;Dbxref=NCBI_GP:QIE17663.1;Name=QIE17663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257292.1;locus_tag=IXO1088_023990;product=cupin domain-containing protein;protein_id=QIE17663.1;transl_table=11 CP040687.1 Genbank gene 4872640 4873392 . + . ID=gene-IXO1088_023995;Name=IXO1088_023995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_023995 CP040687.1 Protein Homology CDS 4872640 4873392 . + 0 ID=cds-QIE17664.1;Parent=gene-IXO1088_023995;Dbxref=NCBI_GP:QIE17664.1;Name=QIE17664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301087.1;locus_tag=IXO1088_023995;product=pseudouridylate synthase;protein_id=QIE17664.1;transl_table=11 CP040687.1 Genbank gene 4873488 4874030 . - . ID=gene-IXO1088_024000;Name=IXO1088_024000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024000 CP040687.1 Protein Homology CDS 4873488 4874030 . - 0 ID=cds-QIE17665.1;Parent=gene-IXO1088_024000;Dbxref=NCBI_GP:QIE17665.1;Name=QIE17665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635621.1;locus_tag=IXO1088_024000;product=DUF2059 domain-containing protein;protein_id=QIE17665.1;transl_table=11 CP040687.1 Genbank gene 4874123 4874554 . + . ID=gene-IXO1088_024005;Name=IXO1088_024005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024005 CP040687.1 Protein Homology CDS 4874123 4874554 . + 0 ID=cds-QIE17666.1;Parent=gene-IXO1088_024005;Dbxref=NCBI_GP:QIE17666.1;Name=QIE17666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635622.1;locus_tag=IXO1088_024005;product=aminoacyl-tRNA hydrolase;protein_id=QIE17666.1;transl_table=11 CP040687.1 Genbank gene 4874557 4875186 . + . ID=gene-IXO1088_024010;Name=IXO1088_024010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024010 CP040687.1 Protein Homology CDS 4874557 4875186 . + 0 ID=cds-QIE17667.1;Parent=gene-IXO1088_024010;Dbxref=NCBI_GP:QIE17667.1;Name=QIE17667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635623.1;locus_tag=IXO1088_024010;product=lysophosphatidylcholine acyltransferase;protein_id=QIE17667.1;transl_table=11 CP040687.1 Genbank pseudogene 4875223 4875506 . + . ID=gene-IXO1088_024015;Name=IXO1088_024015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024015;pseudo=true CP040687.1 Protein Homology CDS 4875223 4875506 . + 0 ID=cds-IXO1088_024015;Parent=gene-IXO1088_024015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301091.1;locus_tag=IXO1088_024015;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4875472 4875687 . + . ID=gene-IXO1088_024020;Name=IXO1088_024020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024020;pseudo=true CP040687.1 Protein Homology CDS 4875472 4875687 . + 0 ID=cds-IXO1088_024020;Parent=gene-IXO1088_024020;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301092.1;locus_tag=IXO1088_024020;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4875824 4877992 . + . ID=gene-IXO1088_024025;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=IXO1088_024025 CP040687.1 Protein Homology CDS 4875824 4877992 . + 0 ID=cds-QIE17668.1;Parent=gene-IXO1088_024025;Dbxref=NCBI_GP:QIE17668.1;Name=QIE17668.1;gbkey=CDS;gene=dcp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115821.1;locus_tag=IXO1088_024025;product=peptidyl-dipeptidase Dcp;protein_id=QIE17668.1;transl_table=11 CP040687.1 Genbank gene 4878119 4880281 . - . ID=gene-IXO1088_024030;Name=IXO1088_024030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024030 CP040687.1 Protein Homology CDS 4878119 4880281 . - 0 ID=cds-QIE17669.1;Parent=gene-IXO1088_024030;Dbxref=NCBI_GP:QIE17669.1;Name=QIE17669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635626.2;locus_tag=IXO1088_024030;product=type III secretion system effector protein;protein_id=QIE17669.1;transl_table=11 CP040687.1 Genbank pseudogene 4880851 4881102 . + . ID=gene-IXO1088_024035;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=IXO1088_024035;pseudo=true CP040687.1 Protein Homology CDS 4880851 4881102 . + 0 ID=cds-IXO1088_024035;Parent=gene-IXO1088_024035;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305021.1;locus_tag=IXO1088_024035;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4881108 4882073 . - . ID=gene-IXO1088_024040;Name=IXO1088_024040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024040 CP040687.1 Protein Homology CDS 4881108 4882073 . - 0 ID=cds-QIE17670.1;Parent=gene-IXO1088_024040;Dbxref=NCBI_GP:QIE17670.1;Name=QIE17670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_024040;product=IS1595 family transposase;protein_id=QIE17670.1;transl_table=11 CP040687.1 Genbank pseudogene 4882160 4882255 . + . ID=gene-IXO1088_024045;Name=IXO1088_024045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024045;pseudo=true CP040687.1 Protein Homology CDS 4882160 4882255 . + 0 ID=cds-IXO1088_024045;Parent=gene-IXO1088_024045;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_043768368.1;locus_tag=IXO1088_024045;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4882266 4883742 . - . ID=gene-IXO1088_024050;Name=IXO1088_024050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024050;pseudo=true CP040687.1 Protein Homology CDS 4882266 4883742 . - 0 ID=cds-IXO1088_024050;Parent=gene-IXO1088_024050;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445727.1;locus_tag=IXO1088_024050;product=IS5-like element ISXoo5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4884179 4884544 . - . ID=gene-IXO1088_024055;Name=IXO1088_024055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024055 CP040687.1 Protein Homology CDS 4884179 4884544 . - 0 ID=cds-QIE18137.1;Parent=gene-IXO1088_024055;Dbxref=NCBI_GP:QIE18137.1;Name=QIE18137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639409.1;locus_tag=IXO1088_024055;product=L-rhamnose mutarotase;protein_id=QIE18137.1;transl_table=11 CP040687.1 Genbank gene 4884541 4885842 . - . ID=gene-IXO1088_024060;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=IXO1088_024060 CP040687.1 Protein Homology CDS 4884541 4885842 . - 0 ID=cds-QIE17671.1;Parent=gene-IXO1088_024060;Dbxref=NCBI_GP:QIE17671.1;Name=QIE17671.1;gbkey=CDS;gene=fucP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639410.1;locus_tag=IXO1088_024060;product=L-fucose:H+ symporter permease;protein_id=QIE17671.1;transl_table=11 CP040687.1 Genbank gene 4886023 4886799 . + . ID=gene-IXO1088_024065;Name=IXO1088_024065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024065 CP040687.1 Protein Homology CDS 4886023 4886799 . + 0 ID=cds-QIE17672.1;Parent=gene-IXO1088_024065;Dbxref=NCBI_GP:QIE17672.1;Name=QIE17672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407354.1;locus_tag=IXO1088_024065;product=winged helix-turn-helix transcriptional regulator;protein_id=QIE17672.1;transl_table=11 CP040687.1 Genbank gene 4886928 4887691 . - . ID=gene-IXO1088_024070;Name=IXO1088_024070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024070 CP040687.1 Protein Homology CDS 4887376 4887691 . - 0 ID=cds-QIE17673.1;Parent=gene-IXO1088_024070;Dbxref=NCBI_GP:QIE17673.1;Name=QIE17673.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_024070;product=IS5 family transposase;protein_id=QIE17673.1;transl_table=11 CP040687.1 Protein Homology CDS 4886928 4887376 . - 2 ID=cds-QIE17673.1;Parent=gene-IXO1088_024070;Dbxref=NCBI_GP:QIE17673.1;Name=QIE17673.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_024070;product=IS5 family transposase;protein_id=QIE17673.1;transl_table=11 CP040687.1 Genbank gene 4888092 4888676 . + . ID=gene-IXO1088_024075;Name=IXO1088_024075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024075 CP040687.1 Protein Homology CDS 4888092 4888676 . + 0 ID=cds-QIE18138.1;Parent=gene-IXO1088_024075;Dbxref=NCBI_GP:QIE18138.1;Name=QIE18138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407353.1;locus_tag=IXO1088_024075;product=manganese efflux pump MntP family protein;protein_id=QIE18138.1;transl_table=11 CP040687.1 Genbank gene 4888869 4892318 . - . ID=gene-IXO1088_024080;Name=IXO1088_024080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024080 CP040687.1 Protein Homology CDS 4888869 4892318 . - 0 ID=cds-QIE18139.1;Parent=gene-IXO1088_024080;Dbxref=NCBI_GP:QIE18139.1;Name=QIE18139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487640.1;locus_tag=IXO1088_024080;product=hybrid sensor histidine kinase/response regulator;protein_id=QIE18139.1;transl_table=11 CP040687.1 Genbank gene 4893066 4895708 . + . ID=gene-IXO1088_024085;Name=IXO1088_024085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024085 CP040687.1 Protein Homology CDS 4893066 4895708 . + 0 ID=cds-QIE17674.1;Parent=gene-IXO1088_024085;Dbxref=NCBI_GP:QIE17674.1;Name=QIE17674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966495.1;locus_tag=IXO1088_024085;product=hypothetical protein;protein_id=QIE17674.1;transl_table=11 CP040687.1 Genbank gene 4895812 4898211 . - . ID=gene-IXO1088_024090;Name=IXO1088_024090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024090 CP040687.1 Protein Homology CDS 4895812 4898211 . - 0 ID=cds-QIE18140.1;Parent=gene-IXO1088_024090;Dbxref=NCBI_GP:QIE18140.1;Name=QIE18140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487634.1;locus_tag=IXO1088_024090;product=NdvB protein;protein_id=QIE18140.1;transl_table=11 CP040687.1 Genbank gene 4898214 4899596 . - . ID=gene-IXO1088_024095;Name=IXO1088_024095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024095 CP040687.1 Protein Homology CDS 4898214 4899596 . - 0 ID=cds-QIE17675.1;Parent=gene-IXO1088_024095;Dbxref=NCBI_GP:QIE17675.1;Name=QIE17675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302349.1;locus_tag=IXO1088_024095;product=MFS transporter;protein_id=QIE17675.1;transl_table=11 CP040687.1 Genbank gene 4899754 4900338 . + . ID=gene-IXO1088_024100;Name=IXO1088_024100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024100 CP040687.1 Protein Homology CDS 4899754 4900338 . + 0 ID=cds-QIE17676.1;Parent=gene-IXO1088_024100;Dbxref=NCBI_GP:QIE17676.1;Name=QIE17676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571736.1;locus_tag=IXO1088_024100;product=gluconokinase;protein_id=QIE17676.1;transl_table=11 CP040687.1 Genbank pseudogene 4900424 4900618 . - . ID=gene-IXO1088_024105;Name=IXO1088_024105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024105;pseudo=true CP040687.1 Protein Homology CDS 4900424 4900618 . - 0 ID=cds-IXO1088_024105;Parent=gene-IXO1088_024105;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113136.1;locus_tag=IXO1088_024105;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4901219 4902973 . + . ID=gene-IXO1088_024110;Name=IXO1088_024110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024110 CP040687.1 Protein Homology CDS 4901219 4902973 . + 0 ID=cds-QIE17677.1;Parent=gene-IXO1088_024110;Dbxref=NCBI_GP:QIE17677.1;Name=QIE17677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407346.1;locus_tag=IXO1088_024110;product=polyvinylalcohol dehydrogenase;protein_id=QIE17677.1;transl_table=11 CP040687.1 Genbank gene 4903281 4903586 . - . ID=gene-IXO1088_024115;Name=IXO1088_024115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024115 CP040687.1 Protein Homology CDS 4903281 4903586 . - 0 ID=cds-QIE17678.1;Parent=gene-IXO1088_024115;Dbxref=NCBI_GP:QIE17678.1;Name=QIE17678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639420.1;locus_tag=IXO1088_024115;product=hypothetical protein;protein_id=QIE17678.1;transl_table=11 CP040687.1 Genbank gene 4903489 4903929 . - . ID=gene-IXO1088_024120;Name=IXO1088_024120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024120 CP040687.1 Protein Homology CDS 4903489 4903929 . - 0 ID=cds-QIE18141.1;Parent=gene-IXO1088_024120;Dbxref=NCBI_GP:QIE18141.1;Name=QIE18141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639421.1;locus_tag=IXO1088_024120;product=3-dehydroquinate dehydratase;protein_id=QIE18141.1;transl_table=11 CP040687.1 Genbank gene 4903949 4904377 . - . ID=gene-IXO1088_024125;Name=IXO1088_024125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024125 CP040687.1 Protein Homology CDS 4903949 4904377 . - 0 ID=cds-QIE17679.1;Parent=gene-IXO1088_024125;Dbxref=NCBI_GP:QIE17679.1;Name=QIE17679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639422.1;locus_tag=IXO1088_024125;product=hypothetical protein;protein_id=QIE17679.1;transl_table=11 CP040687.1 Genbank pseudogene 4904637 4905739 . + . ID=gene-IXO1088_024130;Name=IXO1088_024130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024130;pseudo=true CP040687.1 Protein Homology CDS 4904637 4905739 . + 0 ID=cds-IXO1088_024130;Parent=gene-IXO1088_024130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=IXO1088_024130;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4905872 4907191 . - . ID=gene-IXO1088_024135;Name=IXO1088_024135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024135 CP040687.1 Protein Homology CDS 4905872 4907191 . - 0 ID=cds-QIE17680.1;Parent=gene-IXO1088_024135;Dbxref=NCBI_GP:QIE17680.1;Name=QIE17680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_024135;product=IS701 family transposase;protein_id=QIE17680.1;transl_table=11 CP040687.1 Genbank pseudogene 4907280 4908443 . - . ID=gene-IXO1088_024140;Name=IXO1088_024140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024140;pseudo=true CP040687.1 Protein Homology CDS 4907280 4908443 . - 0 ID=cds-IXO1088_024140;Parent=gene-IXO1088_024140;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635523.1;locus_tag=IXO1088_024140;product=IS4 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4908531 4909850 . + . ID=gene-IXO1088_024145;Name=IXO1088_024145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024145;pseudo=true CP040687.1 Protein Homology CDS 4908531 4909850 . + 0 ID=cds-IXO1088_024145;Parent=gene-IXO1088_024145;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_024145;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4910063 4911031 . - . ID=gene-IXO1088_024150;Name=IXO1088_024150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024150 CP040687.1 Protein Homology CDS 4910063 4911031 . - 0 ID=cds-QIE17681.1;Parent=gene-IXO1088_024150;Dbxref=NCBI_GP:QIE17681.1;Name=QIE17681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258802.1;locus_tag=IXO1088_024150;product=IS5-like element ISXo1 family transposase;protein_id=QIE17681.1;transl_table=11 CP040687.1 Genbank pseudogene 4911168 4911359 . + . ID=gene-IXO1088_024155;Name=IXO1088_024155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024155;pseudo=true CP040687.1 Protein Homology CDS 4911168 4911359 . + 0 ID=cds-IXO1088_024155;Parent=gene-IXO1088_024155;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_024155;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4911448 4912227 . + . ID=gene-IXO1088_024160;Name=IXO1088_024160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024160;pseudo=true CP040687.1 Protein Homology CDS 4911448 4912227 . + 0 ID=cds-IXO1088_024160;Parent=gene-IXO1088_024160;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_024160;product=IS1595-like element ISXo5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4912314 4913633 . - . ID=gene-IXO1088_024165;Name=IXO1088_024165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024165 CP040687.1 Protein Homology CDS 4912314 4913633 . - 0 ID=cds-QIE17682.1;Parent=gene-IXO1088_024165;Dbxref=NCBI_GP:QIE17682.1;Name=QIE17682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_024165;product=IS701 family transposase;protein_id=QIE17682.1;transl_table=11 CP040687.1 Genbank gene 4913721 4913945 . - . ID=gene-IXO1088_024170;Name=IXO1088_024170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024170 CP040687.1 Protein Homology CDS 4913721 4913945 . - 0 ID=cds-QIE17683.1;Parent=gene-IXO1088_024170;Dbxref=NCBI_GP:QIE17683.1;Name=QIE17683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445108.1;locus_tag=IXO1088_024170;product=transposase;protein_id=QIE17683.1;transl_table=11 CP040687.1 Genbank gene 4913926 4915161 . - . ID=gene-IXO1088_024175;Name=IXO1088_024175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024175 CP040687.1 Protein Homology CDS 4913926 4915161 . - 0 ID=cds-QIE17684.1;Parent=gene-IXO1088_024175;Dbxref=NCBI_GP:QIE17684.1;Name=QIE17684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408623.1;locus_tag=IXO1088_024175;product=ISL3-like element ISXoo13 family transposase;protein_id=QIE17684.1;transl_table=11 CP040687.1 Genbank pseudogene 4915225 4916436 . - . ID=gene-IXO1088_024180;Name=IXO1088_024180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024180;pseudo=true CP040687.1 Protein Homology CDS 4915225 4916436 . - 0 ID=cds-IXO1088_024180;Parent=gene-IXO1088_024180;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_024180;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4916507 4916785 . + . ID=gene-IXO1088_024185;Name=IXO1088_024185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024185;pseudo=true CP040687.1 Protein Homology CDS 4916507 4916785 . + 0 ID=cds-IXO1088_024185;Parent=gene-IXO1088_024185;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_024185;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4916843 4917799 . - . ID=gene-IXO1088_024190;Name=IXO1088_024190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024190 CP040687.1 Protein Homology CDS 4916843 4917799 . - 0 ID=cds-QIE17685.1;Parent=gene-IXO1088_024190;Dbxref=NCBI_GP:QIE17685.1;Name=QIE17685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_082322974.1;locus_tag=IXO1088_024190;product=IS30 family transposase;protein_id=QIE17685.1;transl_table=11 CP040687.1 Genbank pseudogene 4917887 4918555 . + . ID=gene-IXO1088_024195;Name=IXO1088_024195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024195;pseudo=true CP040687.1 Protein Homology CDS 4917887 4918555 . + 0 ID=cds-IXO1088_024195;Parent=gene-IXO1088_024195;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260016.1;locus_tag=IXO1088_024195;product=IS630 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4918644 4919609 . + . ID=gene-IXO1088_024200;Name=IXO1088_024200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024200 CP040687.1 Protein Homology CDS 4918644 4919609 . + 0 ID=cds-QIE17686.1;Parent=gene-IXO1088_024200;Dbxref=NCBI_GP:QIE17686.1;Name=QIE17686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_024200;product=IS1595-like element ISXo5 family transposase;protein_id=QIE17686.1;transl_table=11 CP040687.1 Genbank gene 4919627 4920184 . + . ID=gene-IXO1088_024205;Name=IXO1088_024205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024205 CP040687.1 Protein Homology CDS 4919627 4920184 . + 0 ID=cds-QIE17687.1;Parent=gene-IXO1088_024205;Dbxref=NCBI_GP:QIE17687.1;Name=QIE17687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112941.1;locus_tag=IXO1088_024205;product=GNAT family N-acetyltransferase;protein_id=QIE17687.1;transl_table=11 CP040687.1 Genbank gene 4920203 4920490 . - . ID=gene-IXO1088_024210;Name=IXO1088_024210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024210 CP040687.1 Protein Homology CDS 4920203 4920490 . - 0 ID=cds-QIE18142.1;Parent=gene-IXO1088_024210;Dbxref=NCBI_GP:QIE18142.1;Name=QIE18142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364918.1;locus_tag=IXO1088_024210;product=hypothetical protein;protein_id=QIE18142.1;transl_table=11 CP040687.1 Genbank gene 4920875 4921669 . + . ID=gene-IXO1088_024215;Name=IXO1088_024215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024215 CP040687.1 Protein Homology CDS 4920875 4921669 . + 0 ID=cds-QIE17688.1;Parent=gene-IXO1088_024215;Dbxref=NCBI_GP:QIE17688.1;Name=QIE17688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639541.1;locus_tag=IXO1088_024215;product=ATP-binding cassette domain-containing protein;protein_id=QIE17688.1;transl_table=11 CP040687.1 Genbank gene 4921669 4922418 . + . ID=gene-IXO1088_024220;Name=IXO1088_024220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024220 CP040687.1 Protein Homology CDS 4921669 4922418 . + 0 ID=cds-QIE17689.1;Parent=gene-IXO1088_024220;Dbxref=NCBI_GP:QIE17689.1;Name=QIE17689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639542.1;locus_tag=IXO1088_024220;product=ABC transporter permease;protein_id=QIE17689.1;transl_table=11 CP040687.1 Genbank gene 4922430 4922981 . + . ID=gene-IXO1088_024225;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=IXO1088_024225 CP040687.1 Protein Homology CDS 4922430 4922981 . + 0 ID=cds-QIE17690.1;Parent=gene-IXO1088_024225;Dbxref=NCBI_GP:QIE17690.1;Name=QIE17690.1;gbkey=CDS;gene=mlaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002803915.1;locus_tag=IXO1088_024225;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=QIE17690.1;transl_table=11 CP040687.1 Genbank gene 4922978 4923640 . + . ID=gene-IXO1088_024230;Name=IXO1088_024230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024230 CP040687.1 Protein Homology CDS 4922978 4923640 . + 0 ID=cds-QIE17691.1;Parent=gene-IXO1088_024230;Dbxref=NCBI_GP:QIE17691.1;Name=QIE17691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482305.1;locus_tag=IXO1088_024230;product=organic solvent ABC transporter;protein_id=QIE17691.1;transl_table=11 CP040687.1 Genbank gene 4923630 4923920 . + . ID=gene-IXO1088_024235;Name=IXO1088_024235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024235 CP040687.1 Protein Homology CDS 4923630 4923920 . + 0 ID=cds-QIE17692.1;Parent=gene-IXO1088_024235;Dbxref=NCBI_GP:QIE17692.1;Name=QIE17692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257254.1;locus_tag=IXO1088_024235;product=STAS domain-containing protein;protein_id=QIE17692.1;transl_table=11 CP040687.1 Genbank gene 4923931 4924989 . + . ID=gene-IXO1088_024240;Name=IXO1088_024240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024240 CP040687.1 Protein Homology CDS 4923931 4924989 . + 0 ID=cds-QIE17693.1;Parent=gene-IXO1088_024240;Dbxref=NCBI_GP:QIE17693.1;Name=QIE17693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364905.1;locus_tag=IXO1088_024240;product=VacJ family lipoprotein;protein_id=QIE17693.1;transl_table=11 CP040687.1 Genbank pseudogene 4925282 4926658 . - . ID=gene-IXO1088_024245;Name=IXO1088_024245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024245;pseudo=true CP040687.1 Protein Homology CDS 4925282 4926658 . - 0 ID=cds-IXO1088_024245;Parent=gene-IXO1088_024245;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1088_024245;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4926788 4927551 . - . ID=gene-IXO1088_024250;Name=IXO1088_024250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024250 CP040687.1 Protein Homology CDS 4927236 4927551 . - 0 ID=cds-QIE17694.1;Parent=gene-IXO1088_024250;Dbxref=NCBI_GP:QIE17694.1;Name=QIE17694.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_024250;product=IS5 family transposase;protein_id=QIE17694.1;transl_table=11 CP040687.1 Protein Homology CDS 4926788 4927236 . - 2 ID=cds-QIE17694.1;Parent=gene-IXO1088_024250;Dbxref=NCBI_GP:QIE17694.1;Name=QIE17694.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=IXO1088_024250;product=IS5 family transposase;protein_id=QIE17694.1;transl_table=11 CP040687.1 Genbank pseudogene 4927656 4928616 . + . ID=gene-IXO1088_024255;Name=IXO1088_024255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024255;pseudo=true CP040687.1 Protein Homology CDS 4927656 4928616 . + 0 ID=cds-IXO1088_024255;Parent=gene-IXO1088_024255;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1;locus_tag=IXO1088_024255;product=IS1595-like element ISXo2 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4928675 4928827 . + . ID=gene-IXO1088_024260;Name=IXO1088_024260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024260;pseudo=true CP040687.1 Protein Homology CDS 4928675 4928827 . + 0 ID=cds-IXO1088_024260;Parent=gene-IXO1088_024260;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408015.1;locus_tag=IXO1088_024260;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4928992 4929948 . + . ID=gene-IXO1088_024265;Name=IXO1088_024265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024265 CP040687.1 Protein Homology CDS 4928992 4929948 . + 0 ID=cds-QIE17695.1;Parent=gene-IXO1088_024265;Dbxref=NCBI_GP:QIE17695.1;Name=QIE17695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1088_024265;product=IS30-like element IS1112b family transposase;protein_id=QIE17695.1;transl_table=11 CP040687.1 Genbank gene 4930021 4930836 . - . ID=gene-IXO1088_024270;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=IXO1088_024270 CP040687.1 Protein Homology CDS 4930021 4930836 . - 0 ID=cds-QIE17696.1;Parent=gene-IXO1088_024270;Dbxref=NCBI_GP:QIE17696.1;Name=QIE17696.1;gbkey=CDS;gene=mutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639486.1;locus_tag=IXO1088_024270;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=QIE17696.1;transl_table=11 CP040687.1 Genbank pseudogene 4931080 4931274 . + . ID=gene-IXO1088_024275;Name=IXO1088_024275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024275;pseudo=true CP040687.1 Protein Homology CDS 4931080 4931274 . + 0 ID=cds-IXO1088_024275;Parent=gene-IXO1088_024275;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_024275;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4931360 4931650 . + . ID=gene-IXO1088_024280;Name=IXO1088_024280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024280;pseudo=true CP040687.1 Protein Homology CDS 4931360 4931650 . + 0 ID=cds-IXO1088_024280;Parent=gene-IXO1088_024280;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_024280;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4931557 4931748 . - . ID=gene-IXO1088_024285;Name=IXO1088_024285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024285 CP040687.1 Protein Homology CDS 4931557 4931748 . - 0 ID=cds-QIE17697.1;Parent=gene-IXO1088_024285;Dbxref=NCBI_GP:QIE17697.1;Name=QIE17697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017166331.1;locus_tag=IXO1088_024285;product=hypothetical protein;protein_id=QIE17697.1;transl_table=11 CP040687.1 Genbank gene 4931711 4932819 . + . ID=gene-IXO1088_024290;Name=IXO1088_024290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024290 CP040687.1 Protein Homology CDS 4931711 4931966 . + 0 ID=cds-QIE17698.1;Parent=gene-IXO1088_024290;Dbxref=NCBI_GP:QIE17698.1;Name=QIE17698.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612183.1;locus_tag=IXO1088_024290;product=IS3 family transposase;protein_id=QIE17698.1;transl_table=11 CP040687.1 Protein Homology CDS 4931966 4932819 . + 2 ID=cds-QIE17698.1;Parent=gene-IXO1088_024290;Dbxref=NCBI_GP:QIE17698.1;Name=QIE17698.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612183.1;locus_tag=IXO1088_024290;product=IS3 family transposase;protein_id=QIE17698.1;transl_table=11 CP040687.1 Genbank gene 4932916 4933030 . - . ID=gene-IXO1088_024295;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=IXO1088_024295 CP040687.1 cmsearch rRNA 4932916 4933030 . - . ID=rna-IXO1088_024295;Parent=gene-IXO1088_024295;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_024295;product=5S ribosomal RNA CP040687.1 cmsearch exon 4932916 4933030 . - . ID=exon-IXO1088_024295-1;Parent=rna-IXO1088_024295;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_024295;product=5S ribosomal RNA CP040687.1 Genbank gene 4933195 4936093 . - . ID=gene-IXO1088_024300;Name=IXO1088_024300;gbkey=Gene;gene_biotype=rRNA;locus_tag=IXO1088_024300 CP040687.1 Genbank rRNA 4933195 4936093 . - . ID=rna-IXO1088_024300;Parent=gene-IXO1088_024300;gbkey=rRNA;locus_tag=IXO1088_024300;product=23S ribosomal RNA CP040687.1 Genbank exon 4933195 4936093 . - . ID=exon-IXO1088_024300-1;Parent=rna-IXO1088_024300;gbkey=rRNA;locus_tag=IXO1088_024300;product=23S ribosomal RNA CP040687.1 Genbank gene 4936314 4936390 . - . ID=gene-IXO1088_024305;Name=IXO1088_024305;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_024305 CP040687.1 tRNAscan-SE tRNA 4936314 4936390 . - . ID=rna-IXO1088_024305;Parent=gene-IXO1088_024305;anticodon=(pos:complement(4936354..4936356));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_024305;product=tRNA-Ile CP040687.1 tRNAscan-SE exon 4936314 4936390 . - . ID=exon-IXO1088_024305-1;Parent=rna-IXO1088_024305;anticodon=(pos:complement(4936354..4936356));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_024305;product=tRNA-Ile CP040687.1 Genbank gene 4936410 4936485 . - . ID=gene-IXO1088_024310;Name=IXO1088_024310;gbkey=Gene;gene_biotype=tRNA;locus_tag=IXO1088_024310 CP040687.1 tRNAscan-SE tRNA 4936410 4936485 . - . ID=rna-IXO1088_024310;Parent=gene-IXO1088_024310;anticodon=(pos:complement(4936450..4936452));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_024310;product=tRNA-Ala CP040687.1 tRNAscan-SE exon 4936410 4936485 . - . ID=exon-IXO1088_024310-1;Parent=rna-IXO1088_024310;anticodon=(pos:complement(4936450..4936452));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=IXO1088_024310;product=tRNA-Ala CP040687.1 Genbank gene 4936579 4938125 . - . ID=gene-IXO1088_024315;Name=IXO1088_024315;gbkey=Gene;gene_biotype=rRNA;locus_tag=IXO1088_024315 CP040687.1 Genbank rRNA 4936579 4938125 . - . ID=rna-IXO1088_024315;Parent=gene-IXO1088_024315;gbkey=rRNA;locus_tag=IXO1088_024315;product=16S ribosomal RNA CP040687.1 Genbank exon 4936579 4938125 . - . ID=exon-IXO1088_024315-1;Parent=rna-IXO1088_024315;gbkey=rRNA;locus_tag=IXO1088_024315;product=16S ribosomal RNA CP040687.1 Genbank pseudogene 4938877 4940047 . + . ID=gene-IXO1088_024320;Name=benE;gbkey=Gene;gene=benE;gene_biotype=pseudogene;locus_tag=IXO1088_024320;pseudo=true CP040687.1 Protein Homology CDS 4938877 4940047 . + 0 ID=cds-IXO1088_024320;Parent=gene-IXO1088_024320;Note=frameshifted;gbkey=CDS;gene=benE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916614.1;locus_tag=IXO1088_024320;product=benzoate/H(+) symporter BenE family transporter;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4940156 4942060 . - . ID=gene-IXO1088_024325;Name=IXO1088_024325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024325 CP040687.1 Protein Homology CDS 4940156 4942060 . - 0 ID=cds-QIE17699.1;Parent=gene-IXO1088_024325;Dbxref=NCBI_GP:QIE17699.1;Name=QIE17699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639488.1;locus_tag=IXO1088_024325;product=GAF domain-containing protein;protein_id=QIE17699.1;transl_table=11 CP040687.1 Genbank gene 4942057 4942659 . - . ID=gene-IXO1088_024330;Name=IXO1088_024330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024330 CP040687.1 Protein Homology CDS 4942057 4942659 . - 0 ID=cds-QIE17700.1;Parent=gene-IXO1088_024330;Dbxref=NCBI_GP:QIE17700.1;Name=QIE17700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501447.1;locus_tag=IXO1088_024330;product=biliverdin-producing heme oxygenase;protein_id=QIE17700.1;transl_table=11 CP040687.1 Genbank gene 4942719 4944023 . - . ID=gene-IXO1088_024335;Name=IXO1088_024335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024335 CP040687.1 Protein Homology CDS 4942719 4944023 . - 0 ID=cds-QIE17701.1;Parent=gene-IXO1088_024335;Dbxref=NCBI_GP:QIE17701.1;Name=QIE17701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407318.1;locus_tag=IXO1088_024335;product=TCR/Tet family MFS transporter;protein_id=QIE17701.1;transl_table=11 CP040687.1 Genbank gene 4944579 4946741 . - . ID=gene-IXO1088_024340;Name=IXO1088_024340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024340 CP040687.1 Protein Homology CDS 4944579 4946741 . - 0 ID=cds-QIE17702.1;Parent=gene-IXO1088_024340;Dbxref=NCBI_GP:QIE17702.1;Name=QIE17702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639491.1;locus_tag=IXO1088_024340;product=lytic murein transglycosylase;protein_id=QIE17702.1;transl_table=11 CP040687.1 Genbank gene 4946918 4946992 . + . ID=gene-IXO1088_024345;Name=IXO1088_024345;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_024345 CP040687.1 cmsearch ncRNA 4946918 4946992 . + . ID=rna-IXO1088_024345;Parent=gene-IXO1088_024345;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_024345;product=sX9 sRNA CP040687.1 cmsearch exon 4946918 4946992 . + . ID=exon-IXO1088_024345-1;Parent=rna-IXO1088_024345;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_024345;product=sX9 sRNA CP040687.1 Genbank gene 4947035 4947241 . - . ID=gene-IXO1088_024350;Name=IXO1088_024350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024350 CP040687.1 Protein Homology CDS 4947035 4947241 . - 0 ID=cds-QIE17703.1;Parent=gene-IXO1088_024350;Dbxref=NCBI_GP:QIE17703.1;Name=QIE17703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154992.1;locus_tag=IXO1088_024350;product=hypothetical protein;protein_id=QIE17703.1;transl_table=11 CP040687.1 Genbank gene 4947449 4947838 . - . ID=gene-IXO1088_024355;Name=IXO1088_024355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024355 CP040687.1 Protein Homology CDS 4947449 4947838 . - 0 ID=cds-QIE17704.1;Parent=gene-IXO1088_024355;Dbxref=NCBI_GP:QIE17704.1;Name=QIE17704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571430.1;locus_tag=IXO1088_024355;product=hypothetical protein;protein_id=QIE17704.1;transl_table=11 CP040687.1 Genbank pseudogene 4947974 4948927 . - . ID=gene-IXO1088_024360;Name=IXO1088_024360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024360;pseudo=true CP040687.1 Protein Homology CDS 4947974 4948927 . - 0 ID=cds-IXO1088_024360;Parent=gene-IXO1088_024360;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_082322974.1;locus_tag=IXO1088_024360;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4949182 4950312 . - . ID=gene-IXO1088_024365;Name=IXO1088_024365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024365 CP040687.1 Protein Homology CDS 4949182 4950312 . - 0 ID=cds-QIE17705.1;Parent=gene-IXO1088_024365;Dbxref=NCBI_GP:QIE17705.1;Name=QIE17705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257239.1;locus_tag=IXO1088_024365;product=glycoside hydrolase family 5 protein;protein_id=QIE17705.1;transl_table=11 CP040687.1 Genbank gene 4950879 4950955 . + . ID=gene-IXO1088_024370;Name=IXO1088_024370;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_024370 CP040687.1 cmsearch ncRNA 4950879 4950955 . + . ID=rna-IXO1088_024370;Parent=gene-IXO1088_024370;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_024370;product=sX9 sRNA CP040687.1 cmsearch exon 4950879 4950955 . + . ID=exon-IXO1088_024370-1;Parent=rna-IXO1088_024370;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_024370;product=sX9 sRNA CP040687.1 Genbank gene 4950960 4952012 . - . ID=gene-IXO1088_024375;Name=IXO1088_024375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024375 CP040687.1 Protein Homology CDS 4950960 4952012 . - 0 ID=cds-QIE18143.1;Parent=gene-IXO1088_024375;Dbxref=NCBI_GP:QIE18143.1;Name=QIE18143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010375107.1;locus_tag=IXO1088_024375;product=glycoside hydrolase family 5 protein;protein_id=QIE18143.1;transl_table=11 CP040687.1 Genbank pseudogene 4952132 4952325 . - . ID=gene-IXO1088_024380;Name=IXO1088_024380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024380;pseudo=true CP040687.1 Protein Homology CDS 4952132 4952325 . - 0 ID=cds-IXO1088_024380;Parent=gene-IXO1088_024380;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154987.1;locus_tag=IXO1088_024380;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4952775 4953848 . - . ID=gene-IXO1088_024385;Name=IXO1088_024385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024385 CP040687.1 Protein Homology CDS 4952775 4953848 . - 0 ID=cds-QIE17706.1;Parent=gene-IXO1088_024385;Dbxref=NCBI_GP:QIE17706.1;Name=QIE17706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011345792.1;locus_tag=IXO1088_024385;product=glycoside hydrolase family 5 protein;protein_id=QIE17706.1;transl_table=11 CP040687.1 Genbank gene 4953964 4954170 . - . ID=gene-IXO1088_024390;Name=IXO1088_024390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024390 CP040687.1 Protein Homology CDS 4953964 4954170 . - 0 ID=cds-QIE18144.1;Parent=gene-IXO1088_024390;Dbxref=NCBI_GP:QIE18144.1;Name=QIE18144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446397.1;locus_tag=IXO1088_024390;product=hypothetical protein;protein_id=QIE18144.1;transl_table=11 CP040687.1 Genbank gene 4954156 4955214 . + . ID=gene-IXO1088_024395;Name=IXO1088_024395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024395 CP040687.1 Protein Homology CDS 4954156 4955214 . + 0 ID=cds-QIE17707.1;Parent=gene-IXO1088_024395;Dbxref=NCBI_GP:QIE17707.1;Name=QIE17707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635424.1;locus_tag=IXO1088_024395;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=QIE17707.1;transl_table=11 CP040687.1 Genbank pseudogene 4955383 4956343 . - . ID=gene-IXO1088_024400;Name=IXO1088_024400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024400;pseudo=true CP040687.1 Protein Homology CDS 4955383 4956343 . - 0 ID=cds-IXO1088_024400;Parent=gene-IXO1088_024400;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_024400;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4956468 4956635 . + . ID=gene-IXO1088_024405;Name=IXO1088_024405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024405;pseudo=true CP040687.1 Protein Homology CDS 4956468 4956635 . + 0 ID=cds-IXO1088_024405;Parent=gene-IXO1088_024405;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_024405;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4956786 4957882 . - . ID=gene-IXO1088_024410;Name=IXO1088_024410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024410;pseudo=true CP040687.1 Protein Homology CDS 4956786 4957882 . - 0 ID=cds-IXO1088_024410;Parent=gene-IXO1088_024410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006226249.1;locus_tag=IXO1088_024410;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4958030 4958563 . + . ID=gene-IXO1088_024415;Name=IXO1088_024415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024415 CP040687.1 Protein Homology CDS 4958030 4958563 . + 0 ID=cds-QIE17708.1;Parent=gene-IXO1088_024415;Dbxref=NCBI_GP:QIE17708.1;Name=QIE17708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155196.1;locus_tag=IXO1088_024415;product=lipocalin family protein;protein_id=QIE17708.1;transl_table=11 CP040687.1 Genbank pseudogene 4958621 4958787 . - . ID=gene-IXO1088_024420;Name=IXO1088_024420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024420;pseudo=true CP040687.1 Protein Homology CDS 4958621 4958787 . - 0 ID=cds-IXO1088_024420;Parent=gene-IXO1088_024420;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639463.1;locus_tag=IXO1088_024420;product=ribonuclease E inhibitor RraB;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4958905 4959504 . + . ID=gene-IXO1088_024425;Name=IXO1088_024425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024425;pseudo=true CP040687.1 Protein Homology CDS 4958905 4959504 . + 0 ID=cds-IXO1088_024425;Parent=gene-IXO1088_024425;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=IXO1088_024425;product=transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4959506 4959706 . + . ID=gene-IXO1088_024430;Name=IXO1088_024430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024430;pseudo=true CP040687.1 Protein Homology CDS 4959506 4959706 . + 0 ID=cds-IXO1088_024430;Parent=gene-IXO1088_024430;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407232.1;locus_tag=IXO1088_024430;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4959712 4961308 . - . ID=gene-IXO1088_024435;Name=IXO1088_024435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024435;pseudo=true CP040687.1 Protein Homology CDS 4959712 4961308 . - 0 ID=cds-IXO1088_024435;Parent=gene-IXO1088_024435;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635553.2;locus_tag=IXO1088_024435;product=TonB-dependent siderophore receptor;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4961495 4962293 . - . ID=gene-IXO1088_024440;Name=IXO1088_024440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024440 CP040687.1 Protein Homology CDS 4962022 4962293 . - 0 ID=cds-QIE17709.1;Parent=gene-IXO1088_024440;Dbxref=NCBI_GP:QIE17709.1;Name=QIE17709.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_024440;product=IS5 family transposase;protein_id=QIE17709.1;transl_table=11 CP040687.1 Protein Homology CDS 4961495 4962023 . - 1 ID=cds-QIE17709.1;Parent=gene-IXO1088_024440;Dbxref=NCBI_GP:QIE17709.1;Name=QIE17709.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_024440;product=IS5 family transposase;protein_id=QIE17709.1;transl_table=11 CP040687.1 Genbank gene 4962451 4962933 . - . ID=gene-IXO1088_024445;Name=IXO1088_024445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024445 CP040687.1 Protein Homology CDS 4962451 4962933 . - 0 ID=cds-QIE17710.1;Parent=gene-IXO1088_024445;Dbxref=NCBI_GP:QIE17710.1;Name=QIE17710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635552.1;locus_tag=IXO1088_024445;product=Lrp/AsnC family transcriptional regulator;protein_id=QIE17710.1;transl_table=11 CP040687.1 Genbank gene 4963061 4963951 . + . ID=gene-IXO1088_024450;Name=IXO1088_024450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024450 CP040687.1 Protein Homology CDS 4963061 4963951 . + 0 ID=cds-QIE17711.1;Parent=gene-IXO1088_024450;Dbxref=NCBI_GP:QIE17711.1;Name=QIE17711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635551.1;locus_tag=IXO1088_024450;product=phenylalanine 4-monooxygenase;protein_id=QIE17711.1;transl_table=11 CP040687.1 Genbank gene 4964092 4964736 . + . ID=gene-IXO1088_024455;Name=IXO1088_024455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024455 CP040687.1 Protein Homology CDS 4964092 4964736 . + 0 ID=cds-QIE17712.1;Parent=gene-IXO1088_024455;Dbxref=NCBI_GP:QIE17712.1;Name=QIE17712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490472.1;locus_tag=IXO1088_024455;product=DUF4375 domain-containing protein;protein_id=QIE17712.1;transl_table=11 CP040687.1 Genbank gene 4964958 4965284 . - . ID=gene-IXO1088_024460;Name=IXO1088_024460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024460 CP040687.1 Protein Homology CDS 4964958 4965284 . - 0 ID=cds-QIE18145.1;Parent=gene-IXO1088_024460;Dbxref=NCBI_GP:QIE18145.1;Name=QIE18145.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07883.9;locus_tag=IXO1088_024460;product=cupin domain-containing protein;protein_id=QIE18145.1;transl_table=11 CP040687.1 Genbank gene 4965316 4965801 . - . ID=gene-IXO1088_024465;Name=IXO1088_024465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024465 CP040687.1 Protein Homology CDS 4965316 4965801 . - 0 ID=cds-QIE17713.1;Parent=gene-IXO1088_024465;Dbxref=NCBI_GP:QIE17713.1;Name=QIE17713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257225.1;locus_tag=IXO1088_024465;product=rhamnogalacturonan acetylesterase;protein_id=QIE17713.1;transl_table=11 CP040687.1 Genbank pseudogene 4966157 4966699 . - . ID=gene-IXO1088_024470;Name=IXO1088_024470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024470;pseudo=true CP040687.1 Protein Homology CDS 4966157 4966699 . - 0 ID=cds-IXO1088_024470;Parent=gene-IXO1088_024470;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012436974.1;locus_tag=IXO1088_024470;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4966733 4967834 . - . ID=gene-IXO1088_024475;Name=IXO1088_024475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024475;pseudo=true CP040687.1 Protein Homology CDS 4966733 4967834 . - 0 ID=cds-IXO1088_024475;Parent=gene-IXO1088_024475;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558217.1;locus_tag=IXO1088_024475;product=IS3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 4967905 4968348 . + . ID=gene-IXO1088_024480;Name=IXO1088_024480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024480;pseudo=true CP040687.1 Protein Homology CDS 4967905 4968348 . + 0 ID=cds-IXO1088_024480;Parent=gene-IXO1088_024480;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611817.1;locus_tag=IXO1088_024480;product=IS5-like element ISXo3 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4968515 4968817 . - . ID=gene-IXO1088_024485;Name=IXO1088_024485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024485 CP040687.1 Protein Homology CDS 4968515 4968817 . - 0 ID=cds-QIE17714.1;Parent=gene-IXO1088_024485;Dbxref=NCBI_GP:QIE17714.1;Name=QIE17714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635663.1;locus_tag=IXO1088_024485;product=hypothetical protein;protein_id=QIE17714.1;transl_table=11 CP040687.1 Genbank gene 4968963 4969766 . - . ID=gene-IXO1088_024490;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=IXO1088_024490 CP040687.1 Protein Homology CDS 4968963 4969766 . - 0 ID=cds-QIE17715.1;Parent=gene-IXO1088_024490;Dbxref=NCBI_GP:QIE17715.1;Name=QIE17715.1;gbkey=CDS;gene=dkgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635664.1;locus_tag=IXO1088_024490;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=QIE17715.1;transl_table=11 CP040687.1 Genbank gene 4969828 4970856 . - . ID=gene-IXO1088_024495;Name=IXO1088_024495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024495 CP040687.1 Protein Homology CDS 4969828 4970856 . - 0 ID=cds-QIE17716.1;Parent=gene-IXO1088_024495;Dbxref=NCBI_GP:QIE17716.1;Name=QIE17716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635665.1;locus_tag=IXO1088_024495;product=NADP-dependent oxidoreductase;protein_id=QIE17716.1;transl_table=11 CP040687.1 Genbank gene 4970995 4971966 . - . ID=gene-IXO1088_024500;Name=IXO1088_024500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024500 CP040687.1 Protein Homology CDS 4970995 4971966 . - 0 ID=cds-QIE17717.1;Parent=gene-IXO1088_024500;Dbxref=NCBI_GP:QIE17717.1;Name=QIE17717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379903.1;locus_tag=IXO1088_024500;product=aldo/keto reductase;protein_id=QIE17717.1;transl_table=11 CP040687.1 Genbank gene 4972199 4973053 . + . ID=gene-IXO1088_024505;Name=IXO1088_024505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024505 CP040687.1 Protein Homology CDS 4972199 4973053 . + 0 ID=cds-QIE17718.1;Parent=gene-IXO1088_024505;Dbxref=NCBI_GP:QIE17718.1;Name=QIE17718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912328.1;locus_tag=IXO1088_024505;product=class I SAM-dependent methyltransferase;protein_id=QIE17718.1;transl_table=11 CP040687.1 Genbank gene 4973146 4973718 . + . ID=gene-IXO1088_024510;Name=IXO1088_024510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024510 CP040687.1 Protein Homology CDS 4973146 4973718 . + 0 ID=cds-QIE17719.1;Parent=gene-IXO1088_024510;Dbxref=NCBI_GP:QIE17719.1;Name=QIE17719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115848.1;locus_tag=IXO1088_024510;product=pseudouridine synthase;protein_id=QIE17719.1;transl_table=11 CP040687.1 Genbank gene 4973740 4973934 . + . ID=gene-IXO1088_024515;Name=IXO1088_024515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024515 CP040687.1 Protein Homology CDS 4973740 4973934 . + 0 ID=cds-QIE17720.1;Parent=gene-IXO1088_024515;Dbxref=NCBI_GP:QIE17720.1;Name=QIE17720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302416.1;locus_tag=IXO1088_024515;product=hypothetical protein;protein_id=QIE17720.1;transl_table=11 CP040687.1 Genbank gene 4974041 4974481 . - . ID=gene-IXO1088_024520;Name=IXO1088_024520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024520 CP040687.1 Protein Homology CDS 4974041 4974481 . - 0 ID=cds-QIE17721.1;Parent=gene-IXO1088_024520;Dbxref=NCBI_GP:QIE17721.1;Name=QIE17721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635669.1;locus_tag=IXO1088_024520;product=hypothetical protein;protein_id=QIE17721.1;transl_table=11 CP040687.1 Genbank gene 4974644 4977145 . - . ID=gene-IXO1088_024525;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=IXO1088_024525 CP040687.1 Protein Homology CDS 4974644 4977145 . - 0 ID=cds-QIE17722.1;Parent=gene-IXO1088_024525;Dbxref=NCBI_GP:QIE17722.1;Name=QIE17722.1;gbkey=CDS;gene=hrpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050223.1;locus_tag=IXO1088_024525;product=ATP-dependent helicase HrpB;protein_id=QIE17722.1;transl_table=11 CP040687.1 Genbank gene 4977834 4978307 . - . ID=gene-IXO1088_024530;Name=IXO1088_024530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024530 CP040687.1 Protein Homology CDS 4977834 4978307 . - 0 ID=cds-QIE17723.1;Parent=gene-IXO1088_024530;Dbxref=NCBI_GP:QIE17723.1;Name=QIE17723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635672.1;locus_tag=IXO1088_024530;product=DUF1456 family protein;protein_id=QIE17723.1;transl_table=11 CP040687.1 Genbank gene 4978620 4979939 . - . ID=gene-IXO1088_024535;Name=IXO1088_024535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024535 CP040687.1 Protein Homology CDS 4978620 4979939 . - 0 ID=cds-QIE17724.1;Parent=gene-IXO1088_024535;Dbxref=NCBI_GP:QIE17724.1;Name=QIE17724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639408.1;locus_tag=IXO1088_024535;product=L-fuconate dehydratase;protein_id=QIE17724.1;transl_table=11 CP040687.1 Genbank pseudogene 4980178 4980421 . + . ID=gene-IXO1088_024540;Name=IXO1088_024540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024540;pseudo=true CP040687.1 Protein Homology CDS 4980178 4980421 . + 0 ID=cds-IXO1088_024540;Parent=gene-IXO1088_024540;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349047.1;locus_tag=IXO1088_024540;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4980433 4981290 . - . ID=gene-IXO1088_024545;Name=IXO1088_024545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024545 CP040687.1 Protein Homology CDS 4980433 4981290 . - 0 ID=cds-QIE17725.1;Parent=gene-IXO1088_024545;Dbxref=NCBI_GP:QIE17725.1;Name=QIE17725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374389.1;locus_tag=IXO1088_024545;product=fumarylacetoacetate hydrolase family protein;protein_id=QIE17725.1;transl_table=11 CP040687.1 Genbank gene 4981460 4982230 . - . ID=gene-IXO1088_024550;Name=IXO1088_024550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024550 CP040687.1 Protein Homology CDS 4981460 4982230 . - 0 ID=cds-QIE17726.1;Parent=gene-IXO1088_024550;Dbxref=NCBI_GP:QIE17726.1;Name=QIE17726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439611.1;locus_tag=IXO1088_024550;product=SDR family oxidoreductase;protein_id=QIE17726.1;transl_table=11 CP040687.1 Genbank gene 4982227 4983099 . - . ID=gene-IXO1088_024555;Name=IXO1088_024555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024555 CP040687.1 Protein Homology CDS 4982227 4983099 . - 0 ID=cds-QIE17727.1;Parent=gene-IXO1088_024555;Dbxref=NCBI_GP:QIE17727.1;Name=QIE17727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639405.1;locus_tag=IXO1088_024555;product=amidohydrolase;protein_id=QIE17727.1;transl_table=11 CP040687.1 Genbank gene 4983096 4984106 . - . ID=gene-IXO1088_024560;Name=IXO1088_024560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024560 CP040687.1 Protein Homology CDS 4983096 4984106 . - 0 ID=cds-QIE17728.1;Parent=gene-IXO1088_024560;Dbxref=NCBI_GP:QIE17728.1;Name=QIE17728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349045.1;locus_tag=IXO1088_024560;product=aldo/keto reductase;protein_id=QIE17728.1;transl_table=11 CP040687.1 Genbank gene 4984103 4984324 . - . ID=gene-IXO1088_024565;Name=IXO1088_024565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024565 CP040687.1 Protein Homology CDS 4984103 4984324 . - 0 ID=cds-QIE17729.1;Parent=gene-IXO1088_024565;Dbxref=NCBI_GP:QIE17729.1;Name=QIE17729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158476.1;locus_tag=IXO1088_024565;product=hypothetical protein;protein_id=QIE17729.1;transl_table=11 CP040687.1 Genbank gene 4984419 4985516 . + . ID=gene-IXO1088_024570;Name=IXO1088_024570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024570 CP040687.1 Protein Homology CDS 4984419 4985516 . + 0 ID=cds-QIE17730.1;Parent=gene-IXO1088_024570;Dbxref=NCBI_GP:QIE17730.1;Name=QIE17730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260812.1;locus_tag=IXO1088_024570;product=xylosidase;protein_id=QIE17730.1;transl_table=11 CP040687.1 Genbank gene 4985650 4985853 . - . ID=gene-IXO1088_024575;Name=IXO1088_024575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024575 CP040687.1 Protein Homology CDS 4985650 4985853 . - 0 ID=cds-QIE17731.1;Parent=gene-IXO1088_024575;Dbxref=NCBI_GP:QIE17731.1;Name=QIE17731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849177.1;locus_tag=IXO1088_024575;product=hypothetical protein;protein_id=QIE17731.1;transl_table=11 CP040687.1 Genbank pseudogene 4985859 4986296 . + . ID=gene-IXO1088_024580;Name=IXO1088_024580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024580;pseudo=true CP040687.1 Protein Homology CDS 4985859 4986296 . + 0 ID=cds-IXO1088_024580;Parent=gene-IXO1088_024580;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639401.1;locus_tag=IXO1088_024580;product=DUF4424 domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 4986290 4986365 . - . ID=gene-IXO1088_024585;Name=IXO1088_024585;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_024585 CP040687.1 cmsearch ncRNA 4986290 4986365 . - . ID=rna-IXO1088_024585;Parent=gene-IXO1088_024585;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_024585;product=sX9 sRNA CP040687.1 cmsearch exon 4986290 4986365 . - . ID=exon-IXO1088_024585-1;Parent=rna-IXO1088_024585;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_024585;product=sX9 sRNA CP040687.1 Genbank gene 4986769 4987437 . - . ID=gene-IXO1088_024590;Name=IXO1088_024590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024590 CP040687.1 Protein Homology CDS 4986769 4987437 . - 0 ID=cds-QIE17732.1;Parent=gene-IXO1088_024590;Dbxref=NCBI_GP:QIE17732.1;Name=QIE17732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639400.1;locus_tag=IXO1088_024590;product=response regulator transcription factor;protein_id=QIE17732.1;transl_table=11 CP040687.1 Genbank gene 4987699 4989642 . - . ID=gene-IXO1088_024595;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=IXO1088_024595 CP040687.1 Protein Homology CDS 4987699 4989642 . - 0 ID=cds-QIE17733.1;Parent=gene-IXO1088_024595;Dbxref=NCBI_GP:QIE17733.1;Name=QIE17733.1;gbkey=CDS;gene=acs;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639399.1;locus_tag=IXO1088_024595;product=acetate--CoA ligase;protein_id=QIE17733.1;transl_table=11 CP040687.1 Genbank gene 4989940 4990293 . + . ID=gene-IXO1088_024600;Name=IXO1088_024600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024600 CP040687.1 Protein Homology CDS 4989940 4990293 . + 0 ID=cds-QIE17734.1;Parent=gene-IXO1088_024600;Dbxref=NCBI_GP:QIE17734.1;Name=QIE17734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409796.1;locus_tag=IXO1088_024600;product=hypothetical protein;protein_id=QIE17734.1;transl_table=11 CP040687.1 Genbank gene 4990290 4991339 . + . ID=gene-IXO1088_024605;Name=IXO1088_024605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024605 CP040687.1 Protein Homology CDS 4990290 4991339 . + 0 ID=cds-QIE17735.1;Parent=gene-IXO1088_024605;Dbxref=NCBI_GP:QIE17735.1;Name=QIE17735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260817.1;locus_tag=IXO1088_024605;product=hypothetical protein;protein_id=QIE17735.1;transl_table=11 CP040687.1 Genbank gene 4991426 4991743 . + . ID=gene-IXO1088_024610;Name=IXO1088_024610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024610 CP040687.1 Protein Homology CDS 4991426 4991743 . + 0 ID=cds-QIE17736.1;Parent=gene-IXO1088_024610;Dbxref=NCBI_GP:QIE17736.1;Name=QIE17736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639397.1;locus_tag=IXO1088_024610;product=DUF485 domain-containing protein;protein_id=QIE17736.1;transl_table=11 CP040687.1 Genbank gene 4991740 4993467 . + . ID=gene-IXO1088_024615;Name=IXO1088_024615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024615 CP040687.1 Protein Homology CDS 4991740 4993467 . + 0 ID=cds-QIE17737.1;Parent=gene-IXO1088_024615;Dbxref=NCBI_GP:QIE17737.1;Name=QIE17737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639396.2;locus_tag=IXO1088_024615;product=cation acetate symporter;protein_id=QIE17737.1;transl_table=11 CP040687.1 Genbank gene 4993927 4994003 . - . ID=gene-IXO1088_024620;Name=IXO1088_024620;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_024620 CP040687.1 cmsearch ncRNA 4993927 4994003 . - . ID=rna-IXO1088_024620;Parent=gene-IXO1088_024620;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_024620;product=sX9 sRNA CP040687.1 cmsearch exon 4993927 4994003 . - . ID=exon-IXO1088_024620-1;Parent=rna-IXO1088_024620;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_024620;product=sX9 sRNA CP040687.1 Genbank gene 4994075 4994776 . - . ID=gene-IXO1088_024625;Name=IXO1088_024625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024625 CP040687.1 Protein Homology CDS 4994075 4994776 . - 0 ID=cds-QIE17738.1;Parent=gene-IXO1088_024625;Dbxref=NCBI_GP:QIE17738.1;Name=QIE17738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260820.1;locus_tag=IXO1088_024625;product=ROK family protein;protein_id=QIE17738.1;transl_table=11 CP040687.1 Genbank gene 4995133 4995912 . + . ID=gene-IXO1088_024630;Name=xth;gbkey=Gene;gene=xth;gene_biotype=protein_coding;locus_tag=IXO1088_024630 CP040687.1 Protein Homology CDS 4995133 4995912 . + 0 ID=cds-QIE17739.1;Parent=gene-IXO1088_024630;Dbxref=NCBI_GP:QIE17739.1;Name=QIE17739.1;gbkey=CDS;gene=xth;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639385.1;locus_tag=IXO1088_024630;product=exodeoxyribonuclease III;protein_id=QIE17739.1;transl_table=11 CP040687.1 Genbank gene 4995909 4996346 . + . ID=gene-IXO1088_024635;Name=IXO1088_024635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024635 CP040687.1 Protein Homology CDS 4995909 4996346 . + 0 ID=cds-QIE17740.1;Parent=gene-IXO1088_024635;Dbxref=NCBI_GP:QIE17740.1;Name=QIE17740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409800.1;locus_tag=IXO1088_024635;product=GFA family protein;protein_id=QIE17740.1;transl_table=11 CP040687.1 Genbank gene 4996408 4996659 . - . ID=gene-IXO1088_024640;Name=IXO1088_024640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024640 CP040687.1 Protein Homology CDS 4996408 4996659 . - 0 ID=cds-QIE17741.1;Parent=gene-IXO1088_024640;Dbxref=NCBI_GP:QIE17741.1;Name=QIE17741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639383.1;locus_tag=IXO1088_024640;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=QIE17741.1;transl_table=11 CP040687.1 Genbank gene 4996786 4997382 . + . ID=gene-IXO1088_024645;Name=IXO1088_024645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024645 CP040687.1 Protein Homology CDS 4996786 4997382 . + 0 ID=cds-QIE17742.1;Parent=gene-IXO1088_024645;Dbxref=NCBI_GP:QIE17742.1;Name=QIE17742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575969.1;locus_tag=IXO1088_024645;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=QIE17742.1;transl_table=11 CP040687.1 Genbank gene 4997401 4998972 . - . ID=gene-IXO1088_024650;Name=IXO1088_024650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024650 CP040687.1 Protein Homology CDS 4997401 4998972 . - 0 ID=cds-QIE17743.1;Parent=gene-IXO1088_024650;Dbxref=NCBI_GP:QIE17743.1;Name=QIE17743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501577.1;locus_tag=IXO1088_024650;product=alkaline phosphatase;protein_id=QIE17743.1;transl_table=11 CP040687.1 Genbank gene 4999158 5000786 . - . ID=gene-IXO1088_024655;Name=IXO1088_024655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024655 CP040687.1 Protein Homology CDS 4999158 5000786 . - 0 ID=cds-QIE17744.1;Parent=gene-IXO1088_024655;Dbxref=NCBI_GP:QIE17744.1;Name=QIE17744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901821.1;locus_tag=IXO1088_024655;product=alkaline phosphatase;protein_id=QIE17744.1;transl_table=11 CP040687.1 Genbank gene 5001009 5001647 . + . ID=gene-IXO1088_024660;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=IXO1088_024660 CP040687.1 Protein Homology CDS 5001009 5001647 . + 0 ID=cds-QIE17745.1;Parent=gene-IXO1088_024660;Dbxref=NCBI_GP:QIE17745.1;Name=QIE17745.1;gbkey=CDS;gene=rsmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995473.1;locus_tag=IXO1088_024660;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=QIE17745.1;transl_table=11 CP040687.1 Genbank pseudogene 5002001 5002491 . + . ID=gene-IXO1088_024665;Name=IXO1088_024665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024665;pseudo=true CP040687.1 Protein Homology CDS 5002001 5002491 . + 0 ID=cds-IXO1088_024665;Parent=gene-IXO1088_024665;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575963.1;locus_tag=IXO1088_024665;product=DUF885 domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 5002936 5003295 . + . ID=gene-IXO1088_024670;Name=IXO1088_024670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024670 CP040687.1 Protein Homology CDS 5002936 5003295 . + 0 ID=cds-QIE17746.1;Parent=gene-IXO1088_024670;Dbxref=NCBI_GP:QIE17746.1;Name=QIE17746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501582.1;locus_tag=IXO1088_024670;product=hypothetical protein;protein_id=QIE17746.1;transl_table=11 CP040687.1 Genbank gene 5003480 5003716 . + . ID=gene-IXO1088_024675;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=IXO1088_024675 CP040687.1 Protein Homology CDS 5003480 5003716 . + 0 ID=cds-QIE17747.1;Parent=gene-IXO1088_024675;Dbxref=NCBI_GP:QIE17747.1;Name=QIE17747.1;gbkey=CDS;gene=rpmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019185625.1;locus_tag=IXO1088_024675;product=50S ribosomal protein L28;protein_id=QIE17747.1;transl_table=11 CP040687.1 Genbank gene 5003730 5003897 . + . ID=gene-IXO1088_024680;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=IXO1088_024680 CP040687.1 Protein Homology CDS 5003730 5003897 . + 0 ID=cds-QIE17748.1;Parent=gene-IXO1088_024680;Dbxref=NCBI_GP:QIE17748.1;Name=QIE17748.1;gbkey=CDS;gene=rpmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001051801.1;locus_tag=IXO1088_024680;product=50S ribosomal protein L33;protein_id=QIE17748.1;transl_table=11 CP040687.1 Genbank gene 5004330 5005352 . - . ID=gene-IXO1088_024685;Name=IXO1088_024685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024685 CP040687.1 Protein Homology CDS 5004330 5005352 . - 0 ID=cds-QIE17749.1;Parent=gene-IXO1088_024685;Dbxref=NCBI_GP:QIE17749.1;Name=QIE17749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639371.1;locus_tag=IXO1088_024685;product=amidohydrolase;protein_id=QIE17749.1;transl_table=11 CP040687.1 Genbank gene 5005349 5005522 . - . ID=gene-IXO1088_024690;Name=IXO1088_024690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024690 CP040687.1 Protein Homology CDS 5005349 5005522 . - 0 ID=cds-QIE17750.1;Parent=gene-IXO1088_024690;Dbxref=NCBI_GP:QIE17750.1;Name=QIE17750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489874.1;locus_tag=IXO1088_024690;product=4-oxalomesaconate hydratase;protein_id=QIE17750.1;transl_table=11 CP040687.1 Genbank gene 5005676 5006632 . + . ID=gene-IXO1088_024695;Name=IXO1088_024695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024695 CP040687.1 Protein Homology CDS 5005676 5006632 . + 0 ID=cds-QIE17751.1;Parent=gene-IXO1088_024695;Dbxref=NCBI_GP:QIE17751.1;Name=QIE17751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1088_024695;product=IS30-like element IS1112b family transposase;protein_id=QIE17751.1;transl_table=11 CP040687.1 Genbank pseudogene 5006642 5007694 . - . ID=gene-IXO1088_024700;Name=IXO1088_024700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024700;pseudo=true CP040687.1 Protein Homology CDS 5006642 5007694 . - 0 ID=cds-IXO1088_024700;Parent=gene-IXO1088_024700;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639370.1;locus_tag=IXO1088_024700;product=4-oxalomesaconate tautomerase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 5007687 5008358 . - . ID=gene-IXO1088_024705;Name=ligK;gbkey=Gene;gene=ligK;gene_biotype=protein_coding;locus_tag=IXO1088_024705 CP040687.1 Protein Homology CDS 5007687 5008358 . - 0 ID=cds-QIE17752.1;Parent=gene-IXO1088_024705;Dbxref=NCBI_GP:QIE17752.1;Name=QIE17752.1;gbkey=CDS;gene=ligK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639369.1;locus_tag=IXO1088_024705;product=4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase;protein_id=QIE17752.1;transl_table=11 CP040687.1 Genbank gene 5008456 5009763 . + . ID=gene-IXO1088_024710;Name=IXO1088_024710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024710 CP040687.1 Protein Homology CDS 5008456 5009763 . + 0 ID=cds-QIE17753.1;Parent=gene-IXO1088_024710;Dbxref=NCBI_GP:QIE17753.1;Name=QIE17753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157746.1;locus_tag=IXO1088_024710;product=LysR family transcriptional regulator;protein_id=QIE17753.1;transl_table=11 CP040687.1 Genbank gene 5009780 5011198 . + . ID=gene-IXO1088_024715;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=IXO1088_024715 CP040687.1 Protein Homology CDS 5009780 5011198 . + 0 ID=cds-QIE17754.1;Parent=gene-IXO1088_024715;Dbxref=NCBI_GP:QIE17754.1;Name=QIE17754.1;gbkey=CDS;gene=cls;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902730.1;locus_tag=IXO1088_024715;product=cardiolipin synthase;protein_id=QIE17754.1;transl_table=11 CP040687.1 Genbank pseudogene 5011397 5011603 . - . ID=gene-IXO1088_024720;Name=IXO1088_024720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024720;pseudo=true CP040687.1 Protein Homology CDS 5011397 5011603 . - 0 ID=cds-IXO1088_024720;Parent=gene-IXO1088_024720;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113686.1;locus_tag=IXO1088_024720;product=lactoylglutathione lyase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 5011770 5013164 . + . ID=gene-IXO1088_024725;Name=IXO1088_024725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024725 CP040687.1 Protein Homology CDS 5011770 5013164 . + 0 ID=cds-QIE17755.1;Parent=gene-IXO1088_024725;Dbxref=NCBI_GP:QIE17755.1;Name=QIE17755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446436.1;locus_tag=IXO1088_024725;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=QIE17755.1;transl_table=11 CP040687.1 Genbank gene 5013266 5013502 . + . ID=gene-IXO1088_024730;Name=IXO1088_024730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024730 CP040687.1 Protein Homology CDS 5013266 5013502 . + 0 ID=cds-QIE17756.1;Parent=gene-IXO1088_024730;Dbxref=NCBI_GP:QIE17756.1;Name=QIE17756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259286.1;locus_tag=IXO1088_024730;product=hypothetical protein;protein_id=QIE17756.1;transl_table=11 CP040687.1 Genbank gene 5013512 5015698 . + . ID=gene-IXO1088_024735;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=IXO1088_024735 CP040687.1 Protein Homology CDS 5013512 5015698 . + 0 ID=cds-QIE17757.1;Parent=gene-IXO1088_024735;Dbxref=NCBI_GP:QIE17757.1;Name=QIE17757.1;gbkey=CDS;gene=uvrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639365.1;locus_tag=IXO1088_024735;product=DNA helicase II;protein_id=QIE17757.1;transl_table=11 CP040687.1 Genbank gene 5015874 5016098 . - . ID=gene-IXO1088_024740;Name=IXO1088_024740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024740 CP040687.1 Protein Homology CDS 5015874 5016098 . - 0 ID=cds-QIE18146.1;Parent=gene-IXO1088_024740;Dbxref=NCBI_GP:QIE18146.1;Name=QIE18146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010373694.1;locus_tag=IXO1088_024740;product=hypothetical protein;protein_id=QIE18146.1;transl_table=11 CP040687.1 Genbank gene 5016679 5017644 . - . ID=gene-IXO1088_024745;Name=IXO1088_024745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024745 CP040687.1 Protein Homology CDS 5016679 5017644 . - 0 ID=cds-QIE17758.1;Parent=gene-IXO1088_024745;Dbxref=NCBI_GP:QIE17758.1;Name=QIE17758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_102607467.1;locus_tag=IXO1088_024745;product=IS1595-like element ISXo5 family transposase;protein_id=QIE17758.1;transl_table=11 CP040687.1 Genbank gene 5017820 5019235 . - . ID=gene-IXO1088_024750;Name=IXO1088_024750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024750 CP040687.1 Protein Homology CDS 5017820 5019235 . - 0 ID=cds-QIE17759.1;Parent=gene-IXO1088_024750;Dbxref=NCBI_GP:QIE17759.1;Name=QIE17759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639554.1;locus_tag=IXO1088_024750;product=amino acid permease;protein_id=QIE17759.1;transl_table=11 CP040687.1 Genbank gene 5019452 5019661 . + . ID=gene-IXO1088_024755;Name=IXO1088_024755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024755 CP040687.1 Protein Homology CDS 5019452 5019661 . + 0 ID=cds-QIE18147.1;Parent=gene-IXO1088_024755;Dbxref=NCBI_GP:QIE18147.1;Name=QIE18147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501357.1;locus_tag=IXO1088_024755;product=hypothetical protein;protein_id=QIE18147.1;transl_table=11 CP040687.1 Genbank pseudogene 5019699 5020364 . + . ID=gene-IXO1088_024760;Name=IXO1088_024760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024760;pseudo=true CP040687.1 Protein Homology CDS 5019699 5020364 . + 0 ID=cds-IXO1088_024760;Parent=gene-IXO1088_024760;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639550.1;locus_tag=IXO1088_024760;product=zinc-binding alcohol dehydrogenase family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 5020501 5022045 . + . ID=gene-IXO1088_024765;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=IXO1088_024765 CP040687.1 Protein Homology CDS 5020501 5022045 . + 0 ID=cds-QIE17760.1;Parent=gene-IXO1088_024765;Dbxref=NCBI_GP:QIE17760.1;Name=QIE17760.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409813.1;locus_tag=IXO1088_024765;product=DNA recombination protein RmuC;protein_id=QIE17760.1;transl_table=11 CP040687.1 Genbank gene 5022451 5022813 . + . ID=gene-IXO1088_024770;Name=IXO1088_024770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024770 CP040687.1 Protein Homology CDS 5022451 5022813 . + 0 ID=cds-QIE18148.1;Parent=gene-IXO1088_024770;Dbxref=NCBI_GP:QIE18148.1;Name=QIE18148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156008.1;locus_tag=IXO1088_024770;product=hypothetical protein;protein_id=QIE18148.1;transl_table=11 CP040687.1 Genbank gene 5023191 5023736 . + . ID=gene-IXO1088_024775;Name=IXO1088_024775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024775 CP040687.1 Protein Homology CDS 5023191 5023736 . + 0 ID=cds-QIE17761.1;Parent=gene-IXO1088_024775;Dbxref=NCBI_GP:QIE17761.1;Name=QIE17761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376452.1;locus_tag=IXO1088_024775;product=glutathione peroxidase;protein_id=QIE17761.1;transl_table=11 CP040687.1 Genbank pseudogene 5023832 5025208 . - . ID=gene-IXO1088_024780;Name=IXO1088_024780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024780;pseudo=true CP040687.1 Protein Homology CDS 5023832 5025208 . - 0 ID=cds-IXO1088_024780;Parent=gene-IXO1088_024780;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1088_024780;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 5025398 5026717 . + . ID=gene-IXO1088_024785;Name=IXO1088_024785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024785 CP040687.1 Protein Homology CDS 5025398 5026717 . + 0 ID=cds-QIE17762.1;Parent=gene-IXO1088_024785;Dbxref=NCBI_GP:QIE17762.1;Name=QIE17762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612280.1;locus_tag=IXO1088_024785;product=IS701 family transposase;protein_id=QIE17762.1;transl_table=11 CP040687.1 Genbank pseudogene 5026663 5026803 . + . ID=gene-IXO1088_024790;Name=IXO1088_024790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024790;pseudo=true CP040687.1 Protein Homology CDS 5026663 5026803 . + 0 ID=cds-IXO1088_024790;Parent=gene-IXO1088_024790;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409568.1;locus_tag=IXO1088_024790;product=IS701 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 5026990 5028117 . - . ID=gene-IXO1088_024795;Name=IXO1088_024795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024795 CP040687.1 Protein Homology CDS 5026990 5028117 . - 0 ID=cds-QIE18149.1;Parent=gene-IXO1088_024795;Dbxref=NCBI_GP:QIE18149.1;Name=QIE18149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014088871.1;locus_tag=IXO1088_024795;product=PA0069 family radical SAM protein;protein_id=QIE18149.1;transl_table=11 CP040687.1 Genbank pseudogene 5028373 5028833 . - . ID=gene-IXO1088_024800;Name=IXO1088_024800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024800;pseudo=true CP040687.1 Protein Homology CDS 5028373 5028833 . - 0 ID=cds-IXO1088_024800;Parent=gene-IXO1088_024800;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017113518.1;locus_tag=IXO1088_024800;product=2OG-Fe(II) oxygenase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 5029043 5030383 . - . ID=gene-IXO1088_024805;Name=IXO1088_024805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024805 CP040687.1 Protein Homology CDS 5029043 5030383 . - 0 ID=cds-QIE17763.1;Parent=gene-IXO1088_024805;Dbxref=NCBI_GP:QIE17763.1;Name=QIE17763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635412.1;locus_tag=IXO1088_024805;product=hypothetical protein;protein_id=QIE17763.1;transl_table=11 CP040687.1 Genbank gene 5030600 5031292 . + . ID=gene-IXO1088_024810;Name=IXO1088_024810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024810 CP040687.1 Protein Homology CDS 5030600 5031292 . + 0 ID=cds-QIE17764.1;Parent=gene-IXO1088_024810;Dbxref=NCBI_GP:QIE17764.1;Name=QIE17764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635413.1;locus_tag=IXO1088_024810;product=rhomboid family intramembrane serine protease;protein_id=QIE17764.1;transl_table=11 CP040687.1 Genbank gene 5031409 5031729 . + . ID=gene-IXO1088_024815;Name=IXO1088_024815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024815 CP040687.1 Protein Homology CDS 5031409 5031729 . + 0 ID=cds-QIE17765.1;Parent=gene-IXO1088_024815;Dbxref=NCBI_GP:QIE17765.1;Name=QIE17765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635414.1;locus_tag=IXO1088_024815;product=DUF1820 family protein;protein_id=QIE17765.1;transl_table=11 CP040687.1 Genbank gene 5031729 5032721 . + . ID=gene-IXO1088_024820;Name=IXO1088_024820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024820 CP040687.1 Protein Homology CDS 5031729 5032721 . + 0 ID=cds-QIE17766.1;Parent=gene-IXO1088_024820;Dbxref=NCBI_GP:QIE17766.1;Name=QIE17766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112423.1;locus_tag=IXO1088_024820;product=D-2-hydroxyacid dehydrogenase family protein;protein_id=QIE17766.1;transl_table=11 CP040687.1 Genbank gene 5032947 5033023 . + . ID=gene-IXO1088_024825;Name=IXO1088_024825;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IXO1088_024825 CP040687.1 cmsearch ncRNA 5032947 5033023 . + . ID=rna-IXO1088_024825;Parent=gene-IXO1088_024825;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_024825;product=sX9 sRNA CP040687.1 cmsearch exon 5032947 5033023 . + . ID=exon-IXO1088_024825-1;Parent=rna-IXO1088_024825;Dbxref=RFAM:RF02228;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=IXO1088_024825;product=sX9 sRNA CP040687.1 Genbank gene 5033028 5034551 . - . ID=gene-IXO1088_024830;Name=IXO1088_024830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024830 CP040687.1 Protein Homology CDS 5033028 5034551 . - 0 ID=cds-QIE17767.1;Parent=gene-IXO1088_024830;Dbxref=NCBI_GP:QIE17767.1;Name=QIE17767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376383.1;locus_tag=IXO1088_024830;product=PDZ domain-containing protein;protein_id=QIE17767.1;transl_table=11 CP040687.1 Genbank gene 5034656 5035891 . - . ID=gene-IXO1088_024835;Name=IXO1088_024835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024835 CP040687.1 Protein Homology CDS 5034656 5035891 . - 0 ID=cds-QIE18150.1;Parent=gene-IXO1088_024835;Dbxref=NCBI_GP:QIE18150.1;Name=QIE18150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017163095.1;locus_tag=IXO1088_024835;product=peptidase M23;protein_id=QIE18150.1;transl_table=11 CP040687.1 Genbank gene 5036052 5036708 . + . ID=gene-IXO1088_024840;Name=IXO1088_024840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024840 CP040687.1 Protein Homology CDS 5036052 5036708 . + 0 ID=cds-QIE17768.1;Parent=gene-IXO1088_024840;Dbxref=NCBI_GP:QIE17768.1;Name=QIE17768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260853.1;locus_tag=IXO1088_024840;product=hypothetical protein;protein_id=QIE17768.1;transl_table=11 CP040687.1 Genbank gene 5036859 5038670 . + . ID=gene-IXO1088_024845;Name=IXO1088_024845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024845 CP040687.1 Protein Homology CDS 5036859 5038670 . + 0 ID=cds-QIE17769.1;Parent=gene-IXO1088_024845;Dbxref=NCBI_GP:QIE17769.1;Name=QIE17769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118134.1;locus_tag=IXO1088_024845;product=M20/M25/M40 family metallo-hydrolase;protein_id=QIE17769.1;transl_table=11 CP040687.1 Genbank gene 5038818 5039168 . - . ID=gene-IXO1088_024850;Name=IXO1088_024850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024850 CP040687.1 Protein Homology CDS 5038818 5039168 . - 0 ID=cds-QIE17770.1;Parent=gene-IXO1088_024850;Dbxref=NCBI_GP:QIE17770.1;Name=QIE17770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409826.1;locus_tag=IXO1088_024850;product=PepSY domain-containing protein;protein_id=QIE17770.1;transl_table=11 CP040687.1 Genbank gene 5039347 5039553 . - . ID=gene-IXO1088_024855;Name=IXO1088_024855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024855 CP040687.1 GeneMarkS-2+ CDS 5039347 5039553 . - 0 ID=cds-QIE17771.1;Parent=gene-IXO1088_024855;Dbxref=NCBI_GP:QIE17771.1;Name=QIE17771.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IXO1088_024855;product=hypothetical protein;protein_id=QIE17771.1;transl_table=11 CP040687.1 Genbank pseudogene 5039958 5040317 . - . ID=gene-IXO1088_024860;Name=IXO1088_024860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024860;pseudo=true CP040687.1 Protein Homology CDS 5039958 5040317 . - 0 ID=cds-IXO1088_024860;Parent=gene-IXO1088_024860;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13546.4;locus_tag=IXO1088_024860;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 5040876 5042057 . + . ID=gene-IXO1088_024865;Name=IXO1088_024865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024865;pseudo=true CP040687.1 Protein Homology CDS 5040876 5042057 . + 0 ID=cds-IXO1088_024865;Parent=gene-IXO1088_024865;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407283.1;locus_tag=IXO1088_024865;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 5042105 5043286 . - . ID=gene-IXO1088_024870;Name=IXO1088_024870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024870 CP040687.1 Protein Homology CDS 5042105 5043286 . - 0 ID=cds-QIE17772.1;Parent=gene-IXO1088_024870;Dbxref=NCBI_GP:QIE17772.1;Name=QIE17772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112489.1;locus_tag=IXO1088_024870;product=hypothetical protein;protein_id=QIE17772.1;transl_table=11 CP040687.1 Genbank gene 5043384 5046815 . - . ID=gene-IXO1088_024875;Name=IXO1088_024875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024875 CP040687.1 Protein Homology CDS 5043384 5046815 . - 0 ID=cds-QIE17773.1;Parent=gene-IXO1088_024875;Dbxref=NCBI_GP:QIE17773.1;Name=QIE17773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446454.1;locus_tag=IXO1088_024875;product=ATP-binding protein;protein_id=QIE17773.1;transl_table=11 CP040687.1 Genbank gene 5046963 5047661 . - . ID=gene-IXO1088_024880;Name=IXO1088_024880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024880 CP040687.1 Protein Homology CDS 5046963 5047661 . - 0 ID=cds-QIE17774.1;Parent=gene-IXO1088_024880;Dbxref=NCBI_GP:QIE17774.1;Name=QIE17774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381249.1;locus_tag=IXO1088_024880;product=DUF4194 domain-containing protein;protein_id=QIE17774.1;transl_table=11 CP040687.1 Genbank gene 5047645 5049117 . - . ID=gene-IXO1088_024885;Name=IXO1088_024885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024885 CP040687.1 Protein Homology CDS 5047645 5049117 . - 0 ID=cds-QIE17775.1;Parent=gene-IXO1088_024885;Dbxref=NCBI_GP:QIE17775.1;Name=QIE17775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301721.1;locus_tag=IXO1088_024885;product=DUF3375 domain-containing protein;protein_id=QIE17775.1;transl_table=11 CP040687.1 Genbank gene 5049114 5049701 . - . ID=gene-IXO1088_024890;Name=IXO1088_024890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024890 CP040687.1 Protein Homology CDS 5049114 5049701 . - 0 ID=cds-QIE17776.1;Parent=gene-IXO1088_024890;Dbxref=NCBI_GP:QIE17776.1;Name=QIE17776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409832.1;locus_tag=IXO1088_024890;product=DUF4276 family protein;protein_id=QIE17776.1;transl_table=11 CP040687.1 Genbank gene 5049701 5050897 . - . ID=gene-IXO1088_024895;Name=IXO1088_024895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024895 CP040687.1 Protein Homology CDS 5049701 5050897 . - 0 ID=cds-QIE17777.1;Parent=gene-IXO1088_024895;Dbxref=NCBI_GP:QIE17777.1;Name=QIE17777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381256.1;locus_tag=IXO1088_024895;product=chromosome segregation protein SMC;protein_id=QIE17777.1;transl_table=11 CP040687.1 Genbank gene 5050971 5051600 . - . ID=gene-IXO1088_024900;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=IXO1088_024900 CP040687.1 Protein Homology CDS 5050971 5051600 . - 0 ID=cds-QIE17778.1;Parent=gene-IXO1088_024900;Dbxref=NCBI_GP:QIE17778.1;Name=QIE17778.1;gbkey=CDS;gene=folE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639500.1;locus_tag=IXO1088_024900;product=GTP cyclohydrolase I FolE;protein_id=QIE17778.1;transl_table=11 CP040687.1 Genbank gene 5051749 5052192 . + . ID=gene-IXO1088_024905;Name=IXO1088_024905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024905 CP040687.1 Protein Homology CDS 5051749 5052192 . + 0 ID=cds-QIE17779.1;Parent=gene-IXO1088_024905;Dbxref=NCBI_GP:QIE17779.1;Name=QIE17779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014501433.1;locus_tag=IXO1088_024905;product=MarR family transcriptional regulator;protein_id=QIE17779.1;transl_table=11 CP040687.1 Genbank pseudogene 5052234 5052451 . + . ID=gene-IXO1088_024910;Name=IXO1088_024910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024910;pseudo=true CP040687.1 Protein Homology CDS 5052234 5052451 . + 0 ID=cds-IXO1088_024910;Parent=gene-IXO1088_024910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639502.1;locus_tag=IXO1088_024910;product=DUF1656 domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 5052436 5052648 . + . ID=gene-IXO1088_024915;Name=IXO1088_024915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024915;pseudo=true CP040687.1 Protein Homology CDS 5052436 5052648 . + 0 ID=cds-IXO1088_024915;Parent=gene-IXO1088_024915;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639503.1;locus_tag=IXO1088_024915;product=transporter;pseudo=true;transl_table=11 CP040687.1 Genbank gene 5052793 5053542 . + . ID=gene-IXO1088_024920;Name=IXO1088_024920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024920 CP040687.1 Protein Homology CDS 5052793 5053542 . + 0 ID=cds-QIE17780.1;Parent=gene-IXO1088_024920;Dbxref=NCBI_GP:QIE17780.1;Name=QIE17780.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02321.16;locus_tag=IXO1088_024920;product=TolC family protein;protein_id=QIE17780.1;transl_table=11 CP040687.1 Genbank gene 5053539 5054105 . + . ID=gene-IXO1088_024925;Name=IXO1088_024925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024925 CP040687.1 Protein Homology CDS 5053539 5054105 . + 0 ID=cds-QIE17781.1;Parent=gene-IXO1088_024925;Dbxref=NCBI_GP:QIE17781.1;Name=QIE17781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301717.1;locus_tag=IXO1088_024925;product=FUSC family protein;protein_id=QIE17781.1;transl_table=11 CP040687.1 Genbank gene 5054381 5055742 . - . ID=gene-IXO1088_024930;Name=IXO1088_024930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024930 CP040687.1 Protein Homology CDS 5054381 5055742 . - 0 ID=cds-QIE17782.1;Parent=gene-IXO1088_024930;Dbxref=NCBI_GP:QIE17782.1;Name=QIE17782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639506.1;locus_tag=IXO1088_024930;product=MFS transporter;protein_id=QIE17782.1;transl_table=11 CP040687.1 Genbank pseudogene 5055856 5056379 . - . ID=gene-IXO1088_024935;Name=IXO1088_024935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024935;pseudo=true CP040687.1 Protein Homology CDS 5055856 5056379 . - 0 ID=cds-IXO1088_024935;Parent=gene-IXO1088_024935;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007151987.1;locus_tag=IXO1088_024935;product=DUF1905 domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 5056415 5057441 . + . ID=gene-IXO1088_024940;Name=IXO1088_024940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024940;pseudo=true CP040687.1 Protein Homology CDS 5056415 5057441 . + 0 ID=cds-IXO1088_024940;Parent=gene-IXO1088_024940;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301715.1;locus_tag=IXO1088_024940;product=phospholipase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 5057691 5057897 . + . ID=gene-IXO1088_024945;Name=IXO1088_024945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024945 CP040687.1 Protein Homology CDS 5057691 5057897 . + 0 ID=cds-QIE17783.1;Parent=gene-IXO1088_024945;Dbxref=NCBI_GP:QIE17783.1;Name=QIE17783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364297.1;locus_tag=IXO1088_024945;product=hypothetical protein;protein_id=QIE17783.1;transl_table=11 CP040687.1 Genbank pseudogene 5057878 5058995 . + . ID=gene-IXO1088_024950;Name=IXO1088_024950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024950;pseudo=true CP040687.1 Protein Homology CDS 5057878 5058995 . + 0 ID=cds-IXO1088_024950;Parent=gene-IXO1088_024950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639513.1;locus_tag=IXO1088_024950;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 5059136 5059213 . + . ID=gene-IXO1088_024955;Name=IXO1088_024955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024955;pseudo=true CP040687.1 Protein Homology CDS 5059136 5059213 . + 0 ID=cds-IXO1088_024955;Parent=gene-IXO1088_024955;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916676.1;locus_tag=IXO1088_024955;product=plasmid stabilization protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 5059223 5059423 . - . ID=gene-IXO1088_024960;Name=IXO1088_024960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024960;pseudo=true CP040687.1 Protein Homology CDS 5059223 5059423 . - 0 ID=cds-IXO1088_024960;Parent=gene-IXO1088_024960;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407232.1;locus_tag=IXO1088_024960;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 5059442 5060749 . - . ID=gene-IXO1088_024965;Name=IXO1088_024965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024965;pseudo=true CP040687.1 Protein Homology CDS 5059442 5060749 . - 0 ID=cds-IXO1088_024965;Parent=gene-IXO1088_024965;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502411.1;locus_tag=IXO1088_024965;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 5060750 5061704 . - . ID=gene-IXO1088_024970;Name=IXO1088_024970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024970;pseudo=true CP040687.1 Protein Homology CDS 5060750 5061704 . - 0 ID=cds-IXO1088_024970;Parent=gene-IXO1088_024970;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041182719.1;locus_tag=IXO1088_024970;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 5061795 5062094 . - . ID=gene-IXO1088_024975;Name=IXO1088_024975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024975;pseudo=true CP040687.1 Protein Homology CDS 5061795 5062094 . - 0 ID=cds-IXO1088_024975;Parent=gene-IXO1088_024975;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409848.1;locus_tag=IXO1088_024975;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 5062251 5062997 . - . ID=gene-IXO1088_024980;Name=IXO1088_024980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_024980 CP040687.1 Protein Homology CDS 5062251 5062997 . - 0 ID=cds-QIE17784.1;Parent=gene-IXO1088_024980;Dbxref=NCBI_GP:QIE17784.1;Name=QIE17784.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF15579.4;locus_tag=IXO1088_024980;product=hypothetical protein;protein_id=QIE17784.1;transl_table=11 CP040687.1 Genbank pseudogene 5062994 5063271 . - . ID=gene-IXO1088_024985;Name=IXO1088_024985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024985;pseudo=true CP040687.1 Protein Homology CDS 5062994 5063271 . - 0 ID=cds-IXO1088_024985;Parent=gene-IXO1088_024985;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003465803.1;locus_tag=IXO1088_024985;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 5063555 5064269 . - . ID=gene-IXO1088_024990;Name=IXO1088_024990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024990;pseudo=true CP040687.1 Protein Homology CDS 5063555 5064269 . - 0 ID=cds-IXO1088_024990;Parent=gene-IXO1088_024990;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258055.1;locus_tag=IXO1088_024990;product=IS30 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 5064844 5065106 . - . ID=gene-IXO1088_024995;Name=IXO1088_024995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_024995;pseudo=true CP040687.1 Protein Homology CDS 5064844 5065106 . - 0 ID=cds-IXO1088_024995;Parent=gene-IXO1088_024995;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408158.1;locus_tag=IXO1088_024995;product=hypothetical protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 5065704 5066040 . - . ID=gene-IXO1088_025000;Name=IXO1088_025000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_025000;pseudo=true CP040687.1 Protein Homology CDS 5065704 5066040 . - 0 ID=cds-IXO1088_025000;Parent=gene-IXO1088_025000;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009610413.1;locus_tag=IXO1088_025000;product=PAAR domain-containing protein;pseudo=true;transl_table=11 CP040687.1 Genbank pseudogene 5066372 5067753 . - . ID=gene-IXO1088_025005;Name=IXO1088_025005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_025005;pseudo=true CP040687.1 Protein Homology CDS 5066372 5067753 . - 0 ID=cds-IXO1088_025005;Parent=gene-IXO1088_025005;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257172.1;locus_tag=IXO1088_025005;product=IS5 family transposase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 5067976 5068644 . - . ID=gene-IXO1088_025010;Name=IXO1088_025010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_025010 CP040687.1 Protein Homology CDS 5067976 5068644 . - 0 ID=cds-QIE17785.1;Parent=gene-IXO1088_025010;Dbxref=NCBI_GP:QIE17785.1;Name=QIE17785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003241801.1;locus_tag=IXO1088_025010;product=(p)ppGpp synthetase;protein_id=QIE17785.1;transl_table=11 CP040687.1 Genbank gene 5068657 5069766 . - . ID=gene-IXO1088_025015;Name=IXO1088_025015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_025015 CP040687.1 Protein Homology CDS 5068657 5069766 . - 0 ID=cds-QIE17786.1;Parent=gene-IXO1088_025015;Dbxref=NCBI_GP:QIE17786.1;Name=QIE17786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015871547.1;locus_tag=IXO1088_025015;product=ParA family protein;protein_id=QIE17786.1;transl_table=11 CP040687.1 Genbank gene 5069869 5070318 . - . ID=gene-IXO1088_025020;Name=IXO1088_025020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_025020 CP040687.1 Protein Homology CDS 5069869 5070318 . - 0 ID=cds-QIE17787.1;Parent=gene-IXO1088_025020;Dbxref=NCBI_GP:QIE17787.1;Name=QIE17787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574041.1;locus_tag=IXO1088_025020;product=hypothetical protein;protein_id=QIE17787.1;transl_table=11 CP040687.1 Genbank gene 5070443 5070700 . - . ID=gene-IXO1088_025025;Name=IXO1088_025025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_025025 CP040687.1 Protein Homology CDS 5070443 5070700 . - 0 ID=cds-QIE17788.1;Parent=gene-IXO1088_025025;Dbxref=NCBI_GP:QIE17788.1;Name=QIE17788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635462.1;locus_tag=IXO1088_025025;product=hypothetical protein;protein_id=QIE17788.1;transl_table=11 CP040687.1 Genbank gene 5070749 5071213 . - . ID=gene-IXO1088_025030;Name=IXO1088_025030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_025030 CP040687.1 Protein Homology CDS 5070749 5071213 . - 0 ID=cds-QIE17789.1;Parent=gene-IXO1088_025030;Dbxref=NCBI_GP:QIE17789.1;Name=QIE17789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574035.1;locus_tag=IXO1088_025030;product=hypothetical protein;protein_id=QIE17789.1;transl_table=11 CP040687.1 Genbank pseudogene 5071344 5071467 . - . ID=gene-IXO1088_025035;Name=IXO1088_025035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_025035;pseudo=true CP040687.1 Protein Homology CDS 5071344 5071467 . - 0 ID=cds-IXO1088_025035;Parent=gene-IXO1088_025035;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_635465.1;locus_tag=IXO1088_025035;product=CsbD family protein;pseudo=true;transl_table=11 CP040687.1 Genbank gene 5071561 5071767 . - . ID=gene-IXO1088_025040;Name=IXO1088_025040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_025040 CP040687.1 Protein Homology CDS 5071561 5071767 . - 0 ID=cds-QIE17790.1;Parent=gene-IXO1088_025040;Dbxref=NCBI_GP:QIE17790.1;Name=QIE17790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016848720.1;locus_tag=IXO1088_025040;product=hypothetical protein;protein_id=QIE17790.1;transl_table=11 CP040687.1 Genbank pseudogene 5071888 5072536 . - . ID=gene-IXO1088_025045;Name=IXO1088_025045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_025045;pseudo=true CP040687.1 Protein Homology CDS 5071888 5072536 . - 0 ID=cds-IXO1088_025045;Parent=gene-IXO1088_025045;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364873.1;locus_tag=IXO1088_025045;product=PucR family transcriptional regulator;pseudo=true;transl_table=11 CP040687.1 Genbank gene 5072779 5073948 . - . ID=gene-IXO1088_025050;Name=IXO1088_025050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_025050 CP040687.1 Protein Homology CDS 5072779 5073948 . - 0 ID=cds-QIE17791.1;Parent=gene-IXO1088_025050;Dbxref=NCBI_GP:QIE17791.1;Name=QIE17791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017118145.1;locus_tag=IXO1088_025050;product=glycerate kinase;protein_id=QIE17791.1;transl_table=11 CP040687.1 Genbank gene 5073974 5075245 . - . ID=gene-IXO1088_025055;Name=IXO1088_025055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_025055 CP040687.1 Protein Homology CDS 5073974 5075245 . - 0 ID=cds-QIE17792.1;Parent=gene-IXO1088_025055;Dbxref=NCBI_GP:QIE17792.1;Name=QIE17792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116496.1;locus_tag=IXO1088_025055;product=MFS transporter;protein_id=QIE17792.1;transl_table=11 CP040687.1 Genbank pseudogene 5075658 5076927 . - . ID=gene-IXO1088_025060;Name=IXO1088_025060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_025060;pseudo=true CP040687.1 Protein Homology CDS 5075658 5076927 . - 0 ID=cds-IXO1088_025060;Parent=gene-IXO1088_025060;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968240.1;locus_tag=IXO1088_025060;product=membrane dipeptidase;pseudo=true;transl_table=11 CP040687.1 Genbank gene 5077201 5077521 . - . ID=gene-IXO1088_025065;Name=IXO1088_025065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_025065 CP040687.1 Protein Homology CDS 5077201 5077521 . - 0 ID=cds-QIE17793.1;Parent=gene-IXO1088_025065;Dbxref=NCBI_GP:QIE17793.1;Name=QIE17793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639564.1;locus_tag=IXO1088_025065;product=hypothetical protein;protein_id=QIE17793.1;transl_table=11 CP040687.1 Genbank gene 5077640 5078806 . - . ID=gene-IXO1088_025070;Name=IXO1088_025070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_025070 CP040687.1 Protein Homology CDS 5077640 5078806 . - 0 ID=cds-QIE17794.1;Parent=gene-IXO1088_025070;Dbxref=NCBI_GP:QIE17794.1;Name=QIE17794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639565.1;locus_tag=IXO1088_025070;product=class I SAM-dependent rRNA methyltransferase;protein_id=QIE17794.1;transl_table=11 CP040687.1 Genbank pseudogene 5078753 5079121 . + . ID=gene-IXO1088_025075;Name=IXO1088_025075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_025075;pseudo=true CP040687.1 Protein Homology CDS 5078753 5079121 . + 0 ID=cds-IXO1088_025075;Parent=gene-IXO1088_025075;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016945041.1;locus_tag=IXO1088_025075;product=transporter;pseudo=true;transl_table=11 CP040687.1 Genbank gene 5079070 5080026 . + . ID=gene-IXO1088_025080;Name=IXO1088_025080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_025080 CP040687.1 Protein Homology CDS 5079070 5080026 . + 0 ID=cds-QIE17795.1;Parent=gene-IXO1088_025080;Dbxref=NCBI_GP:QIE17795.1;Name=QIE17795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639566.1;locus_tag=IXO1088_025080;product=TerC family protein;protein_id=QIE17795.1;transl_table=11 CP040687.1 Genbank gene 5080401 5081186 . + . ID=gene-IXO1088_025085;Name=IXO1088_025085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_025085 CP040687.1 Protein Homology CDS 5080401 5081186 . + 0 ID=cds-QIE17796.1;Parent=gene-IXO1088_025085;Dbxref=NCBI_GP:QIE17796.1;Name=QIE17796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505371.1;locus_tag=IXO1088_025085;product=rhomboid family intramembrane serine protease;protein_id=QIE17796.1;transl_table=11 CP040687.1 Genbank gene 5081316 5082416 . - . ID=gene-IXO1088_025090;Name=IXO1088_025090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_025090 CP040687.1 Protein Homology CDS 5081316 5082416 . - 0 ID=cds-QIE17797.1;Parent=gene-IXO1088_025090;Dbxref=NCBI_GP:QIE17797.1;Name=QIE17797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155987.1;locus_tag=IXO1088_025090;product=glycerophosphodiester phosphodiesterase;protein_id=QIE17797.1;transl_table=11 CP040687.1 Genbank pseudogene 5082650 5084946 . - . ID=gene-IXO1088_025095;Name=IXO1088_025095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_025095;pseudo=true CP040687.1 Protein Homology CDS 5082650 5084946 . - 0 ID=cds-IXO1088_025095;Parent=gene-IXO1088_025095;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505372.1;locus_tag=IXO1088_025095;product=TonB-dependent receptor;pseudo=true;transl_table=11 CP040687.1 Genbank gene 5085142 5085999 . + . ID=gene-IXO1088_025100;Name=IXO1088_025100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_025100 CP040687.1 Protein Homology CDS 5085142 5085999 . + 0 ID=cds-QIE17798.1;Parent=gene-IXO1088_025100;Dbxref=NCBI_GP:QIE17798.1;Name=QIE17798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007971341.1;locus_tag=IXO1088_025100;product=phosphatase PAP2 family protein;protein_id=QIE17798.1;transl_table=11 CP040687.1 Genbank gene 5086158 5087498 . - . ID=gene-IXO1088_025105;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=IXO1088_025105 CP040687.1 Protein Homology CDS 5086158 5087498 . - 0 ID=cds-QIE17799.1;Parent=gene-IXO1088_025105;Dbxref=NCBI_GP:QIE17799.1;Name=QIE17799.1;gbkey=CDS;gene=mnmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639572.1;locus_tag=IXO1088_025105;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=QIE17799.1;transl_table=11 CP040687.1 Genbank gene 5087663 5090365 . - . ID=gene-IXO1088_025110;Name=IXO1088_025110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_025110 CP040687.1 Protein Homology CDS 5087663 5090365 . - 0 ID=cds-QIE17800.1;Parent=gene-IXO1088_025110;Dbxref=NCBI_GP:QIE17800.1;Name=QIE17800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639573.2;locus_tag=IXO1088_025110;product=tetratricopeptide repeat protein;protein_id=QIE17800.1;transl_table=11 CP040687.1 Genbank gene 5090444 5092168 . - . ID=gene-IXO1088_025115;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=IXO1088_025115 CP040687.1 Protein Homology CDS 5090444 5092168 . - 0 ID=cds-QIE17801.1;Parent=gene-IXO1088_025115;Dbxref=NCBI_GP:QIE17801.1;Name=QIE17801.1;gbkey=CDS;gene=yidC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_639574.1;locus_tag=IXO1088_025115;product=membrane protein insertase YidC;protein_id=QIE17801.1;transl_table=11 CP040687.1 Genbank gene 5092194 5092631 . - . ID=gene-IXO1088_025120;Name=IXO1088_025120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_025120 CP040687.1 Protein Homology CDS 5092194 5092631 . - 0 ID=cds-QIE17802.1;Parent=gene-IXO1088_025120;Dbxref=NCBI_GP:QIE17802.1;Name=QIE17802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364838.1;locus_tag=IXO1088_025120;product=ribonuclease P protein component;protein_id=QIE17802.1;transl_table=11 CP040687.1 Genbank gene 5092670 5092810 . - . ID=gene-IXO1088_025125;Name=IXO1088_025125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IXO1088_025125 CP040687.1 Protein Homology CDS 5092670 5092810 . - 0 ID=cds-QIE17803.1;Parent=gene-IXO1088_025125;Dbxref=NCBI_GP:QIE17803.1;Name=QIE17803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003469983.1;locus_tag=IXO1088_025125;product=50S ribosomal protein L34;protein_id=QIE17803.1;transl_table=11 CP040687.1 Genbank pseudogene 5092915 5093115 . - . ID=gene-IXO1088_000005;Name=IXO1088_000005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IXO1088_000005;pseudo=true CP040687.1 Protein Homology CDS 5092915 5093115 . - 0 ID=cds-IXO1088_000005;Parent=gene-IXO1088_000005;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482219.1;locus_tag=IXO1088_000005;product=hypothetical protein;pseudo=true;transl_table=11 ###