locus-tag class description IXO35_000005 PF00308 Bacterial dnaA protein IXO35_000005 PF08299 Bacterial dnaA protein helix-turn-helix IXO35_000005 PF11638 DnaA N-terminal domain IXO35_000010 PF00712 DNA polymerase III beta subunit, N-terminal domain IXO35_000010 PF02767 DNA polymerase III beta subunit, central domain IXO35_000010 PF02768 DNA polymerase III beta subunit, C-terminal domain IXO35_000015 PF02463 RecF/RecN/SMC N terminal domain IXO35_000020 PF00204 DNA gyrase B IXO35_000020 PF00986 DNA gyrase B subunit, carboxyl terminus IXO35_000020 PF18053 DNA gyrase B subunit insert domain IXO35_000020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_000020 PF01751 Toprim domain IXO35_000030 PF01435 Peptidase family M48 IXO35_000040 PF03544 Gram-negative bacterial TonB protein C-terminal IXO35_000045 PF01618 MotA/TolQ/ExbB proton channel family IXO35_000050 PF02472 Biopolymer transport protein ExbD/TolR IXO35_000055 PF02472 Biopolymer transport protein ExbD/TolR IXO35_000060 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ IXO35_000070 PF13091 PLD-like domain IXO35_000070 PF13396 Phospholipase_D-nuclease N-terminal IXO35_000080 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain IXO35_000085 PF00155 Aminotransferase class I and II IXO35_000090 PF07715 TonB-dependent Receptor Plug Domain IXO35_000090 PF00593 TonB dependent receptor IXO35_000105 PF05598 Transposase domain (DUF772) IXO35_000105 PF01609 Transposase DDE domain IXO35_000110 PF01070 FMN-dependent dehydrogenase IXO35_000130 PF07055 Enoyl reductase FAD binding domain IXO35_000130 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase IXO35_000130 PF12241 Trans-2-enoyl-CoA reductase catalytic region IXO35_000145 PF00294 pfkB family carbohydrate kinase IXO35_000210 PF00293 NUDIX domain IXO35_000210 PF13344 Haloacid dehalogenase-like hydrolase IXO35_000215 PF01609 Transposase DDE domain IXO35_000215 PF05598 Transposase domain (DUF772) IXO35_000230 PF13936 Helix-turn-helix domain IXO35_000230 PF00665 Integrase core domain IXO35_000255 PF01609 Transposase DDE domain IXO35_000255 PF05598 Transposase domain (DUF772) IXO35_000265 PF08338 Domain of unknown function (DUF1731) IXO35_000265 PF01370 NAD dependent epimerase/dehydratase family IXO35_000275 PF08521 Two-component sensor kinase N-terminal IXO35_000275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_000275 PF00512 His Kinase A (phospho-acceptor) domain IXO35_000285 PF00595 PDZ domain IXO35_000315 PF05819 NolX protein IXO35_000365 PF01313 Bacterial export proteins, family 3 IXO35_000370 PF00813 FliP family IXO35_000385 PF00771 FHIPEP family IXO35_000390 PF01312 FlhB HrpN YscU SpaS Family IXO35_000405 PF01514 Secretory protein of YscJ/FliF family IXO35_000420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IXO35_000420 PF02874 ATP synthase alpha/beta family, beta-barrel domain IXO35_000420 PF18269 T3SS EscN ATPase C-terminal domain IXO35_000430 PF01311 Bacterial export proteins, family 1 IXO35_000435 PF00263 Bacterial type II and III secretion system protein IXO35_000435 PF03958 Bacterial type II/III secretion system short domain IXO35_000445 PF01464 Transglycosylase SLT domain IXO35_000465 PF12795 Mechanosensitive ion channel porin domain IXO35_000465 PF12794 Mechanosensitive ion channel inner membrane domain 1 IXO35_000465 PF00924 Mechanosensitive ion channel IXO35_000480 PF03109 ABC1 family IXO35_000485 PF05661 Protein of unknown function (DUF808) IXO35_000490 PF02638 Glycosyl hydrolase-like 10 IXO35_000495 PF00990 Diguanylate cyclase, GGDEF domain IXO35_000500 PF08323 Starch synthase catalytic domain IXO35_000500 PF00534 Glycosyl transferases group 1 IXO35_000505 PF00128 Alpha amylase, catalytic domain IXO35_000505 PF02806 Alpha amylase, C-terminal all-beta domain IXO35_000505 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IXO35_000510 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IXO35_000510 PF11941 Domain of unknown function (DUF3459) IXO35_000510 PF00128 Alpha amylase, catalytic domain IXO35_000515 PF02446 4-alpha-glucanotransferase IXO35_000520 PF00128 Alpha amylase, catalytic domain IXO35_000530 PF00128 Alpha amylase, catalytic domain IXO35_000530 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IXO35_000535 PF13460 NAD(P)H-binding IXO35_000550 PF03150 Di-haem cytochrome c peroxidase IXO35_000615 PF06903 VirK protein IXO35_000625 PF00270 DEAD/DEAH box helicase IXO35_000625 PF00271 Helicase conserved C-terminal domain IXO35_000630 PF05598 Transposase domain (DUF772) IXO35_000630 PF01609 Transposase DDE domain IXO35_000665 PF05598 Transposase domain (DUF772) IXO35_000675 PF00005 ABC transporter IXO35_000695 PF13533 Biotin-lipoyl like IXO35_000705 PF00005 ABC transporter IXO35_000730 PF08845 Toxin SymE, type I toxin-antitoxin system IXO35_000750 PF03006 Haemolysin-III related IXO35_000755 PF00270 DEAD/DEAH box helicase IXO35_000755 PF09369 Domain of unknown function (DUF1998) IXO35_000755 PF00271 Helicase conserved C-terminal domain IXO35_000815 PF04898 Glutamate synthase central domain IXO35_000815 PF00310 Glutamine amidotransferases class-II IXO35_000815 PF01645 Conserved region in glutamate synthase IXO35_000815 PF01493 GXGXG motif IXO35_000820 PF07992 Pyridine nucleotide-disulphide oxidoreductase IXO35_000820 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IXO35_000850 PF05598 Transposase domain (DUF772) IXO35_000860 PF00356 Bacterial regulatory proteins, lacI family IXO35_000885 PF02806 Alpha amylase, C-terminal all-beta domain IXO35_000885 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IXO35_000885 PF00128 Alpha amylase, catalytic domain IXO35_000890 PF00128 Alpha amylase, catalytic domain IXO35_000890 PF16657 Maltogenic Amylase, C-terminal domain IXO35_000895 PF00128 Alpha amylase, catalytic domain IXO35_000895 PF11896 Domain of unknown function (DUF3416) IXO35_000940 PF01078 Magnesium chelatase, subunit ChlI IXO35_000940 PF13335 Magnesium chelatase, subunit ChlI C-terminal IXO35_000945 PF04380 Membrane fusogenic activity IXO35_000950 PF00543 Nitrogen regulatory protein P-II IXO35_000980 PF17284 Spermidine synthase tetramerisation domain IXO35_000985 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IXO35_000985 PF17944 Arginine decarboxylase C-terminal helical extension IXO35_000985 PF17810 Arginine decarboxylase helical bundle domain IXO35_000995 PF13296 Putative type VI secretion system Rhs element Vgr IXO35_000995 PF04717 Type VI secretion system, phage-baseplate injector IXO35_000995 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IXO35_001035 PF13932 GidA associated domain IXO35_001035 PF01134 Glucose inhibited division protein A IXO35_001050 PF00291 Pyridoxal-phosphate dependent enzyme IXO35_001070 PF13649 Methyltransferase domain IXO35_001080 PF12697 Alpha/beta hydrolase family IXO35_001100 PF04349 Periplasmic glucan biosynthesis protein, MdoG IXO35_001110 PF00265 Thymidine kinase IXO35_001120 PF00580 UvrD/REP helicase N-terminal domain IXO35_001120 PF13361 UvrD-like helicase C-terminal domain IXO35_001135 PF04337 Protein of unknown function, DUF480 IXO35_001140 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) IXO35_001145 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IXO35_001150 PF04820 Tryptophan halogenase IXO35_001165 PF00356 Bacterial regulatory proteins, lacI family IXO35_001180 PF01553 Acyltransferase IXO35_001210 PF00657 GDSL-like Lipase/Acylhydrolase IXO35_001225 PF00351 Biopterin-dependent aromatic amino acid hydroxylase IXO35_001230 PF01037 Lrp/AsnC ligand binding domain IXO35_001275 PF00107 Zinc-binding dehydrogenase IXO35_001275 PF08240 Alcohol dehydrogenase GroES-like domain IXO35_001280 PF00150 Cellulase (glycosyl hydrolase family 5) IXO35_001290 PF00150 Cellulase (glycosyl hydrolase family 5) IXO35_001300 PF00150 Cellulase (glycosyl hydrolase family 5) IXO35_001310 PF02810 SEC-C motif IXO35_001320 PF01263 Aldose 1-epimerase IXO35_001325 PF07690 Major Facilitator Superfamily IXO35_001330 PF01126 Heme oxygenase IXO35_001335 PF13426 PAS domain IXO35_001335 PF08446 PAS fold IXO35_001335 PF00360 Phytochrome region IXO35_001335 PF01590 GAF domain IXO35_001385 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IXO35_001385 PF06827 Zinc finger found in FPG and IleRS IXO35_001385 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IXO35_001410 PF04333 MlaA lipoprotein IXO35_001420 PF05494 MlaC protein IXO35_001425 PF02470 MlaD protein IXO35_001430 PF02405 Permease MlaE IXO35_001435 PF00005 ABC transporter IXO35_001510 PF13360 PQQ-like domain IXO35_001510 PF13570 PQQ-like domain IXO35_001510 PF01011 PQQ enzyme repeat IXO35_001520 PF01609 Transposase DDE domain IXO35_001520 PF05598 Transposase domain (DUF772) IXO35_001535 PF06165 Glycosyltransferase family 36 IXO35_001535 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain IXO35_001545 PF00512 His Kinase A (phospho-acceptor) domain IXO35_001545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_001550 PF02659 Putative manganese efflux pump IXO35_001560 PF09339 IclR helix-turn-helix domain IXO35_001560 PF01614 Bacterial transcriptional regulator IXO35_001565 PF07690 Major Facilitator Superfamily IXO35_001570 PF05336 L-rhamnose mutarotase IXO35_001600 PF01432 Peptidase family M3 IXO35_001620 PF00472 RF-1 domain IXO35_001630 PF00849 RNA pseudouridylate synthase IXO35_001640 PF03109 ABC1 family IXO35_001650 PF01820 D-ala D-ala ligase N-terminus IXO35_001650 PF07478 D-ala D-ala ligase C-terminus IXO35_001720 PF08546 Ketopantoate reductase PanE/ApbA C terminal IXO35_001720 PF02558 Ketopantoate reductase PanE/ApbA IXO35_001730 PF01061 ABC-2 type transporter IXO35_001735 PF00005 ABC transporter IXO35_001740 PF00970 Oxidoreductase FAD-binding domain IXO35_001740 PF00111 2Fe-2S iron-sulfur cluster binding domain IXO35_001740 PF00175 Oxidoreductase NAD-binding domain IXO35_001745 PF01545 Cation efflux family IXO35_001750 PF02583 Metal-sensitive transcriptional repressor IXO35_001765 PF01381 Helix-turn-helix IXO35_001775 PF00005 ABC transporter IXO35_001790 PF04820 Tryptophan halogenase IXO35_001810 PF00043 Glutathione S-transferase, C-terminal domain IXO35_001810 PF02798 Glutathione S-transferase, N-terminal domain IXO35_001815 PF00326 Prolyl oligopeptidase family IXO35_001815 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region IXO35_001840 PF00490 Delta-aminolevulinic acid dehydratase IXO35_001855 PF03466 LysR substrate binding domain IXO35_001855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO35_001865 PF00258 Flavodoxin IXO35_001865 PF00667 FAD binding domain IXO35_001865 PF00175 Oxidoreductase NAD-binding domain IXO35_001880 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IXO35_001880 PF01488 Shikimate / quinate 5-dehydrogenase IXO35_001880 PF08501 Shikimate dehydrogenase substrate binding domain IXO35_001895 PF06733 DEAD_2 IXO35_001895 PF13307 Helicase C-terminal domain IXO35_001915 PF13533 Biotin-lipoyl like IXO35_001920 PF00199 Catalase IXO35_001920 PF06628 Catalase-related immune-responsive IXO35_001940 PF01207 Dihydrouridine synthase (Dus) IXO35_001950 PF00072 Response regulator receiver domain IXO35_001950 PF00486 Transcriptional regulatory protein, C terminal IXO35_001955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_001980 PF02237 Biotin protein ligase C terminal domain IXO35_001980 PF03099 Biotin/lipoate A/B protein ligase family IXO35_001980 PF08279 HTH domain IXO35_001985 PF03309 Type III pantothenate kinase IXO35_002000 PF02223 Thymidylate kinase IXO35_002020 PF00491 Arginase family IXO35_002035 PF05532 CsbD-like IXO35_002040 PF00579 tRNA synthetases class I (W and Y) IXO35_002045 PF00753 Metallo-beta-lactamase superfamily IXO35_002070 PF00892 EamA-like transporter family IXO35_002090 PF00199 Catalase IXO35_002105 PF00883 Cytosol aminopeptidase family, catalytic domain IXO35_002105 PF02789 Cytosol aminopeptidase family, N-terminal domain IXO35_002115 PF01594 AI-2E family transporter IXO35_002125 PF01040 UbiA prenyltransferase family IXO35_002135 PF06968 Biotin and Thiamin Synthesis associated domain IXO35_002135 PF04055 Radical SAM superfamily IXO35_002140 PF00155 Aminotransferase class I and II IXO35_002165 PF00535 Glycosyl transferase family 2 IXO35_002175 PF00109 Beta-ketoacyl synthase, N-terminal domain IXO35_002175 PF02801 Beta-ketoacyl synthase, C-terminal domain IXO35_002180 PF05166 YcgL domain IXO35_002200 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain IXO35_002200 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain IXO35_002210 PF00999 Sodium/hydrogen exchanger family IXO35_002210 PF02254 TrkA-N domain IXO35_002215 PF01769 Divalent cation transporter IXO35_002215 PF03448 MgtE intracellular N domain IXO35_002215 PF00571 CBS domain IXO35_002230 PF00583 Acetyltransferase (GNAT) family IXO35_002230 PF13380 CoA binding domain IXO35_002230 PF13607 Succinyl-CoA ligase like flavodoxin domain IXO35_002240 PF03477 ATP cone domain IXO35_002240 PF02867 Ribonucleotide reductase, barrel domain IXO35_002240 PF00317 Ribonucleotide reductase, all-alpha domain IXO35_002245 PF00268 Ribonucleotide reductase, small chain IXO35_002275 PF02803 Thiolase, C-terminal domain IXO35_002275 PF00108 Thiolase, N-terminal domain IXO35_002280 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal IXO35_002280 PF00775 Dioxygenase IXO35_002295 PF10397 Adenylosuccinate lyase C-terminus IXO35_002295 PF00206 Lyase IXO35_002300 PF12146 Serine aminopeptidase, S33 IXO35_002305 PF02627 Carboxymuconolactone decarboxylase family IXO35_002330 PF00106 short chain dehydrogenase IXO35_002345 PF00750 tRNA synthetases class I (R) IXO35_002345 PF03485 Arginyl tRNA synthetase N terminal domain IXO35_002345 PF05746 DALR anticodon binding domain IXO35_002350 PF04002 RadC-like JAB domain IXO35_002355 PF02441 Flavoprotein IXO35_002355 PF04127 DNA / pantothenate metabolism flavoprotein IXO35_002360 PF00692 dUTPase IXO35_002365 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IXO35_002365 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IXO35_002365 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IXO35_002365 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IXO35_002380 PF00535 Glycosyl transferase family 2 IXO35_002385 PF01370 NAD dependent epimerase/dehydratase family IXO35_002395 PF17762 HTH domain found in ParB protein IXO35_002395 PF02195 ParB-like nuclease domain IXO35_002400 PF13614 AAA domain IXO35_002410 PF00156 Phosphoribosyl transferase domain IXO35_002415 PF03372 Endonuclease/Exonuclease/phosphatase family IXO35_002420 PF07690 Major Facilitator Superfamily IXO35_002430 PF03702 Anhydro-N-acetylmuramic acid kinase IXO35_002435 PF01551 Peptidase family M23 IXO35_002435 PF04225 Opacity-associated protein A LysM-like domain IXO35_002440 PF00579 tRNA synthetases class I (W and Y) IXO35_002475 PF00672 HAMP domain IXO35_002475 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IXO35_002475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_002475 PF01627 Hpt domain IXO35_002475 PF00512 His Kinase A (phospho-acceptor) domain IXO35_002475 PF00072 Response regulator receiver domain IXO35_002480 PF00072 Response regulator receiver domain IXO35_002480 PF00486 Transcriptional regulatory protein, C terminal IXO35_002505 PF01521 Iron-sulphur cluster biosynthesis IXO35_002515 PF00293 NUDIX domain IXO35_002515 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain IXO35_002515 PF09297 NADH pyrophosphatase zinc ribbon domain IXO35_002520 PF17113 Regulatory signalling modulator protein AmpE IXO35_002520 PF03186 CobD/Cbib protein IXO35_002535 PF07690 Major Facilitator Superfamily IXO35_002550 PF12805 FUSC-like inner membrane protein yccS IXO35_002575 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IXO35_002575 PF02843 Phosphoribosylglycinamide synthetase, C domain IXO35_002575 PF02844 Phosphoribosylglycinamide synthetase, N domain IXO35_002585 PF01808 AICARFT/IMPCHase bienzyme IXO35_002585 PF02142 MGS-like domain IXO35_002595 PF12146 Serine aminopeptidase, S33 IXO35_002595 PF12147 Putative methyltransferase IXO35_002600 PF12146 Serine aminopeptidase, S33 IXO35_002600 PF12147 Putative methyltransferase IXO35_002605 PF12146 Serine aminopeptidase, S33 IXO35_002605 PF12147 Putative methyltransferase IXO35_002625 PF02954 Bacterial regulatory protein, Fis family IXO35_002635 PF01381 Helix-turn-helix IXO35_002670 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IXO35_002670 PF02785 Biotin carboxylase C-terminal domain IXO35_002670 PF00289 Biotin carboxylase, N-terminal domain IXO35_002680 PF00364 Biotin-requiring enzyme IXO35_002685 PF01220 Dehydroquinase class II IXO35_002690 PF11412 Disulphide bond corrector protein DsbC IXO35_002690 PF02683 Cytochrome C biogenesis protein transmembrane region IXO35_002695 PF03091 CutA1 divalent ion tolerance protein IXO35_002730 PF00271 Helicase conserved C-terminal domain IXO35_002730 PF00270 DEAD/DEAH box helicase IXO35_002730 PF17764 3′ DNA-binding domain (3′BD) IXO35_002730 PF18074 Primosomal protein N C-terminal domain IXO35_002730 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IXO35_002755 PF01554 MatE IXO35_002760 PF01343 Peptidase family S49 IXO35_002785 PF01300 Telomere recombination IXO35_002790 PF01751 Toprim domain IXO35_002790 PF01131 DNA topoisomerase IXO35_002790 PF13368 Topoisomerase C-terminal repeat IXO35_002800 PF07963 Prokaryotic N-terminal methylation motif IXO35_002800 PF00114 Pilin (bacterial filament) IXO35_002805 PF04361 Protein of unknown function (DUF494) IXO35_002810 PF02481 DNA recombination-mediator protein A IXO35_002810 PF17782 DprA winged helix domain IXO35_002815 PF01476 LysM domain IXO35_002820 PF01327 Polypeptide deformylase IXO35_002825 PF00551 Formyl transferase IXO35_002825 PF02911 Formyl transferase, C-terminal domain IXO35_002855 PF00535 Glycosyl transferase family 2 IXO35_002875 PF00925 GTP cyclohydrolase II IXO35_002890 PF03279 Bacterial lipid A biosynthesis acyltransferase IXO35_002895 PF02580 D-Tyr-tRNA(Tyr) deacylase IXO35_002900 PF04546 Sigma-70, non-essential region IXO35_002900 PF00140 Sigma-70 factor, region 1.2 IXO35_002900 PF04542 Sigma-70 region 2 IXO35_002900 PF04539 Sigma-70 region 3 IXO35_002900 PF04545 Sigma-70, region 4 IXO35_002900 PF03979 Sigma-70 factor, region 1.1 IXO35_002975 PF00005 ABC transporter IXO35_002990 PF00593 TonB dependent receptor IXO35_002990 PF07715 TonB-dependent Receptor Plug Domain IXO35_003055 PF05598 Transposase domain (DUF772) IXO35_003055 PF01609 Transposase DDE domain IXO35_003065 PF01654 Cytochrome bd terminal oxidase subunit I IXO35_003075 PF02954 Bacterial regulatory protein, Fis family IXO35_003075 PF00158 Sigma-54 interaction domain IXO35_003075 PF00072 Response regulator receiver domain IXO35_003115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_003115 PF02743 Cache domain IXO35_003115 PF00672 HAMP domain IXO35_003115 PF06580 Histidine kinase IXO35_003120 PF04397 LytTr DNA-binding domain IXO35_003120 PF00072 Response regulator receiver domain IXO35_003130 PF13520 Amino acid permease IXO35_003150 PF01431 Peptidase family M13 IXO35_003150 PF05649 Peptidase family M13 IXO35_003160 PF00248 Aldo/keto reductase family IXO35_003165 PF03358 NADPH-dependent FMN reductase IXO35_003175 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IXO35_003185 PF03167 Uracil DNA glycosylase superfamily IXO35_003195 PF02469 Fasciclin domain IXO35_003205 PF00999 Sodium/hydrogen exchanger family IXO35_003210 PF00005 ABC transporter IXO35_003215 PF01061 ABC-2 type transporter IXO35_003230 PF00082 Subtilase family IXO35_003230 PF04151 Bacterial pre-peptidase C-terminal domain IXO35_003240 PF00512 His Kinase A (phospho-acceptor) domain IXO35_003240 PF08448 PAS fold IXO35_003240 PF13188 PAS domain IXO35_003240 PF00072 Response regulator receiver domain IXO35_003240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_003245 PF00072 Response regulator receiver domain IXO35_003245 PF00486 Transcriptional regulatory protein, C terminal IXO35_003265 PF13677 Membrane MotB of proton-channel complex MotA/MotB IXO35_003265 PF00691 OmpA family IXO35_003270 PF01618 MotA/TolQ/ExbB proton channel family IXO35_003280 PF01641 SelR domain IXO35_003290 PF01037 Lrp/AsnC ligand binding domain IXO35_003295 PF01266 FAD dependent oxidoreductase IXO35_003300 PF01168 Alanine racemase, N-terminal domain IXO35_003300 PF00842 Alanine racemase, C-terminal domain IXO35_003320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_003320 PF00512 His Kinase A (phospho-acceptor) domain IXO35_003320 PF00989 PAS fold IXO35_003335 PF07995 Glucose / Sorbosone dehydrogenase IXO35_003350 PF08468 Methyltransferase small domain N-terminal IXO35_003350 PF05175 Methyltransferase small domain IXO35_003355 PF01479 S4 domain IXO35_003355 PF00849 RNA pseudouridylate synthase IXO35_003360 PF13419 Haloacid dehalogenase-like hydrolase IXO35_003395 PF04461 Protein of unknown function (DUF520) IXO35_003400 PF00892 EamA-like transporter family IXO35_003405 PF00005 ABC transporter IXO35_003405 PF09383 NIL domain IXO35_003410 PF00528 Binding-protein-dependent transport system inner membrane component IXO35_003415 PF03180 NLPA lipoprotein IXO35_003440 PF02817 e3 binding domain IXO35_003440 PF00364 Biotin-requiring enzyme IXO35_003440 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IXO35_003450 PF07992 Pyridine nucleotide-disulphide oxidoreductase IXO35_003450 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IXO35_003470 PF00119 ATP synthase A chain IXO35_003475 PF00137 ATP synthase subunit C IXO35_003480 PF00430 ATP synthase B/B' CF(0) IXO35_003485 PF00213 ATP synthase delta (OSCP) subunit IXO35_003490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IXO35_003490 PF00306 ATP synthase alpha/beta chain, C terminal domain IXO35_003490 PF02874 ATP synthase alpha/beta family, beta-barrel domain IXO35_003495 PF00231 ATP synthase IXO35_003500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IXO35_003500 PF02874 ATP synthase alpha/beta family, beta-barrel domain IXO35_003505 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IXO35_003510 PF01817 Chorismate mutase type II IXO35_003520 PF14602 Hexapeptide repeat of succinyl-transferase IXO35_003520 PF12804 MobA-like NTP transferase domain IXO35_003520 PF00132 Bacterial transferase hexapeptide (six repeats) IXO35_003555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IXO35_003560 PF01380 SIS domain IXO35_003585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IXO35_003590 PF05275 Copper resistance protein B precursor (CopB) IXO35_003595 PF07732 Multicopper oxidase IXO35_003595 PF07731 Multicopper oxidase IXO35_003595 PF00394 Multicopper oxidase IXO35_003610 PF01432 Peptidase family M3 IXO35_003620 PF00109 Beta-ketoacyl synthase, N-terminal domain IXO35_003620 PF02801 Beta-ketoacyl synthase, C-terminal domain IXO35_003625 PF07977 FabA-like domain IXO35_003635 PF00817 impB/mucB/samB family IXO35_003635 PF11799 impB/mucB/samB family C-terminal domain IXO35_003640 PF13419 Haloacid dehalogenase-like hydrolase IXO35_003650 PF13185 GAF domain IXO35_003665 PF01242 6-pyruvoyl tetrahydropterin synthase IXO35_003670 PF00270 DEAD/DEAH box helicase IXO35_003670 PF00271 Helicase conserved C-terminal domain IXO35_003685 PF14497 Glutathione S-transferase, C-terminal domain IXO35_003685 PF02798 Glutathione S-transferase, N-terminal domain IXO35_003690 PF00437 Type II/IV secretion system protein IXO35_003710 PF00571 CBS domain IXO35_003710 PF00291 Pyridoxal-phosphate dependent enzyme IXO35_003715 PF01053 Cys/Met metabolism PLP-dependent enzyme IXO35_003725 PF01370 NAD dependent epimerase/dehydratase family IXO35_003755 PF00872 Transposase, Mutator family IXO35_003765 PF00005 ABC transporter IXO35_003775 PF01012 Electron transfer flavoprotein domain IXO35_003775 PF00766 Electron transfer flavoprotein FAD-binding domain IXO35_003780 PF01012 Electron transfer flavoprotein domain IXO35_003785 PF16363 GDP-mannose 4,6 dehydratase IXO35_003790 PF00483 Nucleotidyl transferase IXO35_003795 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase IXO35_003800 PF04321 RmlD substrate binding domain IXO35_003805 PF00483 Nucleotidyl transferase IXO35_003805 PF01050 Mannose-6-phosphate isomerase IXO35_003810 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IXO35_003810 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IXO35_003810 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IXO35_003810 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IXO35_003815 PF01144 Coenzyme A transferase IXO35_003820 PF01144 Coenzyme A transferase IXO35_003825 PF14307 Glycosyltransferase WbsX IXO35_003825 PF05045 Rhamnan synthesis protein F IXO35_003845 PF03886 ABC-type transport auxiliary lipoprotein component IXO35_003845 PF02470 MlaD protein IXO35_003850 PF00005 ABC transporter IXO35_003855 PF02405 Permease MlaE IXO35_003865 PF00816 H-NS histone family IXO35_003875 PF03129 Anticodon binding domain IXO35_003875 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IXO35_003875 PF04073 Aminoacyl-tRNA editing domain IXO35_003885 PF01066 CDP-alcohol phosphatidyltransferase IXO35_003915 PF05598 Transposase domain (DUF772) IXO35_003915 PF01609 Transposase DDE domain IXO35_003925 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain IXO35_003925 PF01464 Transglycosylase SLT domain IXO35_003930 PF00544 Pectate lyase IXO35_003950 PF05598 Transposase domain (DUF772) IXO35_003950 PF01609 Transposase DDE domain IXO35_003980 PF08264 Anticodon-binding domain of tRNA IXO35_003980 PF00133 tRNA synthetases class I (I, L, M and V) IXO35_003980 PF10458 Valyl tRNA synthetase tRNA binding arm IXO35_003995 PF00883 Cytosol aminopeptidase family, catalytic domain IXO35_003995 PF02789 Cytosol aminopeptidase family, N-terminal domain IXO35_004005 PF03739 Lipopolysaccharide export system permease LptF/LptG IXO35_004020 PF02899 Phage integrase, N-terminal SAM-like domain IXO35_004020 PF00589 Phage integrase family IXO35_004025 PF10411 Disulfide bond isomerase protein N-terminus IXO35_004025 PF13098 Thioredoxin-like domain IXO35_004030 PF02769 AIR synthase related protein, C-terminal domain IXO35_004030 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain IXO35_004030 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal IXO35_004035 PF03895 YadA-like membrane anchor domain IXO35_004035 PF05662 Coiled stalk of trimeric autotransporter adhesin IXO35_004035 PF05658 Head domain of trimeric autotransporter adhesin IXO35_004035 PF13018 Extended Signal Peptide of Type V secretion system IXO35_004045 PF00437 Type II/IV secretion system protein IXO35_004045 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IXO35_004055 PF00482 Type II secretion system (T2SS), protein F IXO35_004060 PF08334 Type II secretion system (T2SS), protein G IXO35_004065 PF12019 Type II transport protein GspH IXO35_004070 PF07963 Prokaryotic N-terminal methylation motif IXO35_004080 PF03934 Type II secretion system (T2SS), protein K IXO35_004085 PF05137 Fimbrial assembly protein (PilN) IXO35_004090 PF10741 Type II secretion system (T2SS), protein M subtype b IXO35_004100 PF03958 Bacterial type II/III secretion system short domain IXO35_004100 PF00263 Bacterial type II and III secretion system protein IXO35_004115 PF07702 UTRA domain IXO35_004115 PF00392 Bacterial regulatory proteins, gntR family IXO35_004130 PF00593 TonB dependent receptor IXO35_004130 PF07715 TonB-dependent Receptor Plug Domain IXO35_004155 PF09827 CRISPR associated protein Cas2 IXO35_004160 PF01867 CRISPR associated protein Cas1 IXO35_004180 PF09704 CRISPR-associated protein (Cas_Cas5) IXO35_004195 PF01609 Transposase DDE domain IXO35_004195 PF05598 Transposase domain (DUF772) IXO35_004210 PF02545 Maf-like protein IXO35_004215 PF02620 Large ribosomal RNA subunit accumulation protein YceD IXO35_004220 PF01783 Ribosomal L32p protein family IXO35_004225 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IXO35_004225 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IXO35_004235 PF00698 Acyl transferase domain IXO35_004245 PF00550 Phosphopantetheine attachment site IXO35_004250 PF00109 Beta-ketoacyl synthase, N-terminal domain IXO35_004250 PF02801 Beta-ketoacyl synthase, C-terminal domain IXO35_004255 PF04715 Anthranilate synthase component I, N terminal region IXO35_004255 PF00425 chorismate binding enzyme IXO35_004260 PF02618 YceG-like family IXO35_004265 PF09115 DNA polymerase III, delta subunit, C terminal IXO35_004280 PF01609 Transposase DDE domain IXO35_004280 PF05598 Transposase domain (DUF772) IXO35_004300 PF02954 Bacterial regulatory protein, Fis family IXO35_004300 PF06506 Propionate catabolism activator IXO35_004300 PF00158 Sigma-54 interaction domain IXO35_004310 PF00285 Citrate synthase, C-terminal domain IXO35_004315 PF00330 Aconitase family (aconitate hydratase) IXO35_004315 PF00694 Aconitase C-terminal domain IXO35_004325 PF04303 PrpF protein IXO35_004335 PF07715 TonB-dependent Receptor Plug Domain IXO35_004335 PF00593 TonB dependent receptor IXO35_004380 PF13936 Helix-turn-helix domain IXO35_004380 PF00665 Integrase core domain IXO35_004390 PF08534 Redoxin IXO35_004400 PF01556 DnaJ C terminal domain IXO35_004400 PF00226 DnaJ domain IXO35_004405 PF00072 Response regulator receiver domain IXO35_004410 PF01145 SPFH domain / Band 7 family IXO35_004410 PF12221 Bacterial membrane protein N terminal IXO35_004415 PF01145 SPFH domain / Band 7 family IXO35_004425 PF00709 Adenylosuccinate synthetase IXO35_004430 PF11838 ERAP1-like C-terminal domain IXO35_004430 PF01433 Peptidase family M1 domain IXO35_004445 PF05598 Transposase domain (DUF772) IXO35_004490 PF03279 Bacterial lipid A biosynthesis acyltransferase IXO35_004495 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) IXO35_004500 PF02321 Outer membrane efflux protein IXO35_004530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO35_004535 PF00330 Aconitase family (aconitate hydratase) IXO35_004540 PF00694 Aconitase C-terminal domain IXO35_004545 PF08241 Methyltransferase domain IXO35_004550 PF00180 Isocitrate/isopropylmalate dehydrogenase IXO35_004555 PF00682 HMGL-like IXO35_004555 PF08502 LeuA allosteric (dimerisation) domain IXO35_004560 PF00291 Pyridoxal-phosphate dependent enzyme IXO35_004570 PF00205 Thiamine pyrophosphate enzyme, central domain IXO35_004570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IXO35_004570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IXO35_004575 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain IXO35_004575 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain IXO35_004585 PF13667 ThiC-associated domain IXO35_004585 PF01964 Radical SAM ThiC family IXO35_004590 PF18500 CadC C-terminal domain 1 IXO35_004590 PF00486 Transcriptional regulatory protein, C terminal IXO35_004595 PF12833 Helix-turn-helix domain IXO35_004600 PF07715 TonB-dependent Receptor Plug Domain IXO35_004600 PF00593 TonB dependent receptor IXO35_004615 PF00719 Inorganic pyrophosphatase IXO35_004635 PF03030 Inorganic H+ pyrophosphatase IXO35_004660 PF00365 Phosphofructokinase IXO35_004670 PF08245 Mur ligase middle domain IXO35_004670 PF02875 Mur ligase family, glutamate ligase domain IXO35_004670 PF01225 Mur ligase family, catalytic domain IXO35_004680 PF01062 Bestrophin, RFP-TM, chloride channel IXO35_004805 PF02600 Disulfide bond formation protein DsbB IXO35_004815 PF01474 Class-II DAHP synthetase family IXO35_004835 PF03144 Elongation factor Tu domain 2 IXO35_004835 PF00679 Elongation factor G C-terminus IXO35_004835 PF00009 Elongation factor Tu GTP binding domain IXO35_004840 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IXO35_004845 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IXO35_004845 PF00056 lactate/malate dehydrogenase, NAD binding domain IXO35_004850 PF02798 Glutathione S-transferase, N-terminal domain IXO35_004850 PF00043 Glutathione S-transferase, C-terminal domain IXO35_004865 PF05598 Transposase domain (DUF772) IXO35_004865 PF01609 Transposase DDE domain IXO35_004900 PF03009 Glycerophosphoryl diester phosphodiesterase family IXO35_004935 PF01625 Peptide methionine sulfoxide reductase IXO35_004960 PF00923 Transaldolase/Fructose-6-phosphate aldolase IXO35_004965 PF03449 Transcription elongation factor, N-terminal IXO35_004965 PF01272 Transcription elongation factor, GreA/GreB, C-term IXO35_004970 PF03466 LysR substrate binding domain IXO35_004970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO35_004975 PF07992 Pyridine nucleotide-disulphide oxidoreductase IXO35_004975 PF13192 Thioredoxin domain IXO35_004980 PF00578 AhpC/TSA family IXO35_004980 PF10417 C-terminal domain of 1-Cys peroxiredoxin IXO35_004985 PF17827 PrmC N-terminal domain IXO35_004985 PF05175 Methyltransferase small domain IXO35_005010 PF00561 alpha/beta hydrolase fold IXO35_005020 PF00293 NUDIX domain IXO35_005025 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IXO35_005025 PF01612 3'-5' exonuclease IXO35_005025 PF01367 5'-3' exonuclease, C-terminal SAM fold IXO35_005025 PF00476 DNA polymerase family A IXO35_005040 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IXO35_005040 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IXO35_005040 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch IXO35_005060 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch IXO35_005065 PF02233 NAD(P) transhydrogenase beta subunit IXO35_005090 PF01063 Amino-transferase class IV IXO35_005100 PF04073 Aminoacyl-tRNA editing domain IXO35_005110 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain IXO35_005110 PF17189 Glycosyl hydrolase family 30 beta sandwich domain IXO35_005125 PF03358 NADPH-dependent FMN reductase IXO35_005130 PF03631 Virulence factor BrkB IXO35_005135 PF08534 Redoxin IXO35_005140 PF00708 Acylphosphatase IXO35_005150 PF03976 Polyphosphate kinase 2 (PPK2) IXO35_005155 PF00994 Probable molybdopterin binding domain IXO35_005165 PF00472 RF-1 domain IXO35_005165 PF03462 PCRF domain IXO35_005170 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain IXO35_005170 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain IXO35_005170 PF01488 Shikimate / quinate 5-dehydrogenase IXO35_005180 PF03550 Outer membrane lipoprotein LolB IXO35_005185 PF08544 GHMP kinases C terminal IXO35_005185 PF00288 GHMP kinases N terminal domain IXO35_005195 PF14572 Phosphoribosyl synthetase-associated domain IXO35_005195 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IXO35_005200 PF01386 Ribosomal L25p family IXO35_005200 PF14693 Ribosomal protein TL5, C-terminal domain IXO35_005205 PF01195 Peptidyl-tRNA hydrolase IXO35_005210 PF01926 50S ribosome-binding GTPase IXO35_005210 PF06071 Protein of unknown function (DUF933) IXO35_005230 PF00009 Elongation factor Tu GTP binding domain IXO35_005230 PF03144 Elongation factor Tu domain 2 IXO35_005230 PF03143 Elongation factor Tu C-terminal domain IXO35_005240 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IXO35_005245 PF02357 Transcription termination factor nusG IXO35_005245 PF00467 KOW motif IXO35_005250 PF03946 Ribosomal protein L11, N-terminal domain IXO35_005250 PF00298 Ribosomal protein L11, RNA binding domain IXO35_005255 PF00687 Ribosomal protein L1p/L10e family IXO35_005260 PF00466 Ribosomal protein L10 IXO35_005265 PF00542 Ribosomal protein L7/L12 C-terminal domain IXO35_005265 PF16320 Ribosomal protein L7/L12 dimerisation domain IXO35_005270 PF04565 RNA polymerase Rpb2, domain 3 IXO35_005270 PF04561 RNA polymerase Rpb2, domain 2 IXO35_005270 PF10385 RNA polymerase beta subunit external 1 domain IXO35_005270 PF00562 RNA polymerase Rpb2, domain 6 IXO35_005270 PF04560 RNA polymerase Rpb2, domain 7 IXO35_005270 PF04563 RNA polymerase beta subunit IXO35_005275 PF04997 RNA polymerase Rpb1, domain 1 IXO35_005275 PF00623 RNA polymerase Rpb1, domain 2 IXO35_005275 PF04983 RNA polymerase Rpb1, domain 3 IXO35_005275 PF05000 RNA polymerase Rpb1, domain 4 IXO35_005275 PF04998 RNA polymerase Rpb1, domain 5 IXO35_005280 PF00164 Ribosomal protein S12/S23 IXO35_005285 PF00177 Ribosomal protein S7p/S5e IXO35_005290 PF00679 Elongation factor G C-terminus IXO35_005290 PF14492 Elongation Factor G, domain II IXO35_005290 PF03764 Elongation factor G, domain IV IXO35_005290 PF00009 Elongation factor Tu GTP binding domain IXO35_005290 PF03144 Elongation factor Tu domain 2 IXO35_005295 PF03143 Elongation factor Tu C-terminal domain IXO35_005295 PF03144 Elongation factor Tu domain 2 IXO35_005295 PF00009 Elongation factor Tu GTP binding domain IXO35_005305 PF00338 Ribosomal protein S10p/S20e IXO35_005310 PF00297 Ribosomal protein L3 IXO35_005315 PF00573 Ribosomal protein L4/L1 family IXO35_005320 PF00276 Ribosomal protein L23 IXO35_005325 PF00181 Ribosomal Proteins L2, RNA binding domain IXO35_005325 PF03947 Ribosomal Proteins L2, C-terminal domain IXO35_005330 PF00203 Ribosomal protein S19 IXO35_005335 PF00237 Ribosomal protein L22p/L17e IXO35_005340 PF07650 KH domain IXO35_005340 PF00189 Ribosomal protein S3, C-terminal domain IXO35_005345 PF00252 Ribosomal protein L16p/L10e IXO35_005350 PF00831 Ribosomal L29 protein IXO35_005355 PF00366 Ribosomal protein S17 IXO35_005360 PF00238 Ribosomal protein L14p/L23e IXO35_005365 PF00467 KOW motif IXO35_005365 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IXO35_005370 PF00281 Ribosomal protein L5 IXO35_005370 PF00673 ribosomal L5P family C-terminus IXO35_005375 PF00253 Ribosomal protein S14p/S29e IXO35_005380 PF00410 Ribosomal protein S8 IXO35_005385 PF00347 Ribosomal protein L6 IXO35_005390 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IXO35_005395 PF00333 Ribosomal protein S5, N-terminal domain IXO35_005395 PF03719 Ribosomal protein S5, C-terminal domain IXO35_005400 PF00327 Ribosomal protein L30p/L7e IXO35_005405 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IXO35_005410 PF00344 SecY translocase IXO35_005415 PF00416 Ribosomal protein S13/S18 IXO35_005420 PF00411 Ribosomal protein S11 IXO35_005425 PF00163 Ribosomal protein S4/S9 N-terminal domain IXO35_005425 PF01479 S4 domain IXO35_005430 PF01000 RNA polymerase Rpb3/RpoA insert domain IXO35_005430 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IXO35_005430 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IXO35_005435 PF01196 Ribosomal protein L17 IXO35_005485 PF02347 Glycine cleavage system P-protein IXO35_005505 PF00664 ABC transporter transmembrane region IXO35_005505 PF00005 ABC transporter IXO35_005505 PF03412 Peptidase C39 family IXO35_005525 PF08019 Phosphoethanolamine transferase EptA/EptB IXO35_005525 PF00884 Sulfatase IXO35_005535 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase IXO35_005540 PF00072 Response regulator receiver domain IXO35_005540 PF00486 Transcriptional regulatory protein, C terminal IXO35_005545 PF08521 Two-component sensor kinase N-terminal IXO35_005545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_005545 PF00512 His Kinase A (phospho-acceptor) domain IXO35_005555 PF03776 Septum formation topological specificity factor MinE IXO35_005560 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IXO35_005565 PF03775 Septum formation inhibitor MinC, C-terminal domain IXO35_005565 PF05209 Septum formation inhibitor MinC, N-terminal domain IXO35_005575 PF07730 Histidine kinase IXO35_005580 PF00072 Response regulator receiver domain IXO35_005580 PF00196 Bacterial regulatory proteins, luxR family IXO35_005595 PF00730 HhH-GPD superfamily base excision DNA repair protein IXO35_005620 PF02222 ATP-grasp domain IXO35_005625 PF01527 Transposase IXO35_005655 PF06761 Intracellular multiplication and human macrophage-killing IXO35_005655 PF14331 ImcF-related N-terminal domain IXO35_005655 PF06744 Type VI secretion protein IcmF C-terminal IXO35_005665 PF00691 OmpA family IXO35_005665 PF04972 BON domain IXO35_005680 PF06715 Gp5 C-terminal repeat (3 copies) IXO35_005680 PF04717 Type VI secretion system, phage-baseplate injector IXO35_005730 PF03781 Sulfatase-modifying factor enzyme 1 IXO35_005740 PF03781 Sulfatase-modifying factor enzyme 1 IXO35_005750 PF03781 Sulfatase-modifying factor enzyme 1 IXO35_005760 PF04717 Type VI secretion system, phage-baseplate injector IXO35_005810 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 IXO35_005815 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath IXO35_005830 PF05947 Type VI secretion system, TssF IXO35_005840 PF07724 AAA domain (Cdc48 subfamily) IXO35_005840 PF00004 ATPase family associated with various cellular activities (AAA) IXO35_005840 PF17871 AAA lid domain IXO35_005840 PF10431 C-terminal, D2-small domain, of ClpB protein IXO35_005850 PF06715 Gp5 C-terminal repeat (3 copies) IXO35_005850 PF04717 Type VI secretion system, phage-baseplate injector IXO35_005895 PF01609 Transposase DDE domain IXO35_005895 PF05598 Transposase domain (DUF772) IXO35_005910 PF01609 Transposase DDE domain IXO35_005910 PF05598 Transposase domain (DUF772) IXO35_005920 PF04717 Type VI secretion system, phage-baseplate injector IXO35_005930 PF04717 Type VI secretion system, phage-baseplate injector IXO35_005930 PF06715 Gp5 C-terminal repeat (3 copies) IXO35_005955 PF01420 Type I restriction modification DNA specificity domain IXO35_005960 PF02384 N-6 DNA Methylase IXO35_005970 PF08463 EcoEI R protein C-terminal IXO35_005970 PF00271 Helicase conserved C-terminal domain IXO35_005970 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) IXO35_005970 PF04851 Type III restriction enzyme, res subunit IXO35_005990 PF02384 N-6 DNA Methylase IXO35_005995 PF08780 Nucleotidyltransferase substrate binding protein like IXO35_006000 PF01909 Nucleotidyltransferase domain IXO35_006015 PF11867 Domain of unknown function (DUF3387) IXO35_006015 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) IXO35_006015 PF18766 SWI2/SNF2 ATPase IXO35_006045 PF13456 Reverse transcriptase-like IXO35_006045 PF00300 Histidine phosphatase superfamily (branch 1) IXO35_006070 PF01726 LexA DNA binding domain IXO35_006070 PF00717 Peptidase S24-like IXO35_006085 PF07733 Bacterial DNA polymerase III alpha NTPase domain IXO35_006085 PF14579 Helix-hairpin-helix motif IXO35_006085 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IXO35_006085 PF02811 PHP domain IXO35_006100 PF03169 OPT oligopeptide transporter protein IXO35_006120 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region IXO35_006120 PF07676 WD40-like Beta Propeller Repeat IXO35_006120 PF00326 Prolyl oligopeptidase family IXO35_006140 PF02311 AraC-like ligand binding domain IXO35_006140 PF12833 Helix-turn-helix domain IXO35_006165 PF00199 Catalase IXO35_006165 PF06628 Catalase-related immune-responsive IXO35_006165 PF18011 C-terminal domain found in long catalases IXO35_006195 PF00162 Phosphoglycerate kinase IXO35_006200 PF13419 Haloacid dehalogenase-like hydrolase IXO35_006205 PF02887 Pyruvate kinase, alpha/beta domain IXO35_006205 PF00224 Pyruvate kinase, barrel domain IXO35_006210 PF00274 Fructose-bisphosphate aldolase class-I IXO35_006215 PF01661 Macro domain IXO35_006230 PF00291 Pyridoxal-phosphate dependent enzyme IXO35_006235 PF10414 Sirohaem synthase dimerisation region IXO35_006235 PF14824 Sirohaem biosynthesis protein central IXO35_006235 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IXO35_006240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO35_006240 PF03466 LysR substrate binding domain IXO35_006265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_006265 PF00672 HAMP domain IXO35_006265 PF00512 His Kinase A (phospho-acceptor) domain IXO35_006265 PF01627 Hpt domain IXO35_006265 PF00072 Response regulator receiver domain IXO35_006285 PF01507 Phosphoadenosine phosphosulfate reductase family IXO35_006290 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IXO35_006290 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IXO35_006295 PF00175 Oxidoreductase NAD-binding domain IXO35_006295 PF00667 FAD binding domain IXO35_006295 PF00258 Flavodoxin IXO35_006300 PF01507 Phosphoadenosine phosphosulfate reductase family IXO35_006305 PF00009 Elongation factor Tu GTP binding domain IXO35_006315 PF01609 Transposase DDE domain IXO35_006315 PF05598 Transposase domain (DUF772) IXO35_006320 PF00529 HlyD membrane-fusion protein of T1SS IXO35_006320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IXO35_006325 PF00873 AcrB/AcrD/AcrF family IXO35_006330 PF11838 ERAP1-like C-terminal domain IXO35_006330 PF01433 Peptidase family M1 domain IXO35_006350 PF08032 RNA 2'-O ribose methyltransferase substrate binding IXO35_006350 PF00588 SpoU rRNA Methylase family IXO35_006370 PF01741 Large-conductance mechanosensitive channel, MscL IXO35_006375 PF01557 Fumarylacetoacetate (FAA) hydrolase family IXO35_006400 PF03600 Citrate transporter IXO35_006400 PF02080 TrkA-C domain IXO35_006405 PF02390 Putative methyltransferase IXO35_006410 PF05690 Thiazole biosynthesis protein ThiG IXO35_006420 PF03797 Autotransporter beta-domain IXO35_006420 PF00657 GDSL-like Lipase/Acylhydrolase IXO35_006480 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IXO35_006480 PF00128 Alpha amylase, catalytic domain IXO35_006535 PF00085 Thioredoxin IXO35_006545 PF00133 tRNA synthetases class I (I, L, M and V) IXO35_006545 PF13603 Leucyl-tRNA synthetase, Domain 2 IXO35_006545 PF08264 Anticodon-binding domain of tRNA IXO35_006560 PF01467 Cytidylyltransferase-like IXO35_006585 PF02590 Predicted SPOUT methyltransferase IXO35_006615 PF04402 Protein of unknown function (DUF541) IXO35_006620 PF02545 Maf-like protein IXO35_006625 PF10150 Ribonuclease E/G family IXO35_006625 PF00575 S1 RNA binding domain IXO35_006630 PF13502 AsmA-like C-terminal region IXO35_006630 PF13116 Protein of unknown function IXO35_006640 PF01523 Putative modulator of DNA gyrase IXO35_006645 PF04751 Protein of unknown function (DUF615) IXO35_006650 PF01523 Putative modulator of DNA gyrase IXO35_006685 PF00348 Polyprenyl synthetase IXO35_006690 PF02609 Exonuclease VII small subunit IXO35_006695 PF01171 PP-loop family IXO35_006695 PF09179 TilS substrate binding domain IXO35_006695 PF11734 TilS substrate C-terminal domain IXO35_006700 PF00245 Alkaline phosphatase IXO35_006705 PF00375 Sodium:dicarboxylate symporter family IXO35_006720 PF00877 NlpC/P60 family IXO35_006725 PF00877 NlpC/P60 family IXO35_006730 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IXO35_006735 PF04235 Protein of unknown function (DUF418) IXO35_006740 PF01266 FAD dependent oxidoreductase IXO35_006780 PF10609 NUBPL iron-transfer P-loop NTPase IXO35_006785 PF00692 dUTPase IXO35_006805 PF01738 Dienelactone hydrolase family IXO35_006810 PF04055 Radical SAM superfamily IXO35_006810 PF18693 TRAM domain IXO35_006810 PF00919 Uncharacterized protein family UPF0004 IXO35_006815 PF03449 Transcription elongation factor, N-terminal IXO35_006815 PF01272 Transcription elongation factor, GreA/GreB, C-term IXO35_006850 PF02666 Phosphatidylserine decarboxylase IXO35_006855 PF02630 SCO1/SenC IXO35_006860 PF05175 Methyltransferase small domain IXO35_006865 PF01264 Chorismate synthase IXO35_006870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IXO35_006870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IXO35_006875 PF02774 Semialdehyde dehydrogenase, dimerisation domain IXO35_006875 PF01118 Semialdehyde dehydrogenase, NAD binding domain IXO35_006895 PF01416 tRNA pseudouridine synthase IXO35_006900 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase IXO35_006905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO35_006905 PF03466 LysR substrate binding domain IXO35_006910 PF00291 Pyridoxal-phosphate dependent enzyme IXO35_006920 PF00290 Tryptophan synthase alpha chain IXO35_006925 PF17848 Acetyl-coA carboxylase zinc finger domain IXO35_006925 PF01039 Carboxyl transferase domain IXO35_006930 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IXO35_006930 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IXO35_006930 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IXO35_006930 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IXO35_006945 PF00563 EAL domain IXO35_006945 PF00990 Diguanylate cyclase, GGDEF domain IXO35_006945 PF03707 Bacterial signalling protein N terminal repeat IXO35_006980 PF00121 Triosephosphate isomerase IXO35_006995 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 IXO35_007000 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IXO35_007005 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit IXO35_007010 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit IXO35_007020 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IXO35_007020 PF10531 SLBB domain IXO35_007020 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region IXO35_007025 PF00384 Molybdopterin oxidoreductase IXO35_007025 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IXO35_007025 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal IXO35_007030 PF00146 NADH dehydrogenase IXO35_007035 PF12838 4Fe-4S dicluster domain IXO35_007040 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 IXO35_007045 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IXO35_007050 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IXO35_007050 PF00361 Proton-conducting membrane transporter IXO35_007055 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus IXO35_007055 PF00361 Proton-conducting membrane transporter IXO35_007060 PF00361 Proton-conducting membrane transporter IXO35_007070 PF02576 RimP N-terminal domain IXO35_007070 PF17384 RimP C-terminal SH3 domain IXO35_007075 PF08529 NusA N-terminal domain IXO35_007075 PF00575 S1 RNA binding domain IXO35_007075 PF13184 NusA-like KH domain IXO35_007080 PF04760 Translation initiation factor IF-2, N-terminal region IXO35_007080 PF08364 Bacterial translation initiation factor IF-2 associated region IXO35_007080 PF00009 Elongation factor Tu GTP binding domain IXO35_007080 PF11987 Translation-initiation factor 2 IXO35_007085 PF02033 Ribosome-binding factor A IXO35_007090 PF09157 Pseudouridine synthase II TruB, C-terminal IXO35_007090 PF01509 TruB family pseudouridylate synthase (N terminal domain) IXO35_007090 PF16198 tRNA pseudouridylate synthase B C-terminal domain IXO35_007095 PF00312 Ribosomal protein S15 IXO35_007100 PF00013 KH domain IXO35_007100 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IXO35_007100 PF01138 3' exoribonuclease family, domain 1 IXO35_007100 PF00575 S1 RNA binding domain IXO35_007100 PF03725 3' exoribonuclease family, domain 2 IXO35_007110 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain IXO35_007110 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain IXO35_007120 PF00731 AIR carboxylase IXO35_007125 PF02222 ATP-grasp domain IXO35_007125 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain IXO35_007130 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IXO35_007130 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IXO35_007135 PF00462 Glutaredoxin IXO35_007145 PF01914 MarC family integral membrane protein IXO35_007155 PF00593 TonB dependent receptor IXO35_007160 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases IXO35_007160 PF03641 Possible lysine decarboxylase IXO35_007160 PF11892 Domain of unknown function (DUF3412) IXO35_007165 PF12019 Type II transport protein GspH IXO35_007165 PF07963 Prokaryotic N-terminal methylation motif IXO35_007185 PF05567 Neisseria PilC beta-propeller domain IXO35_007190 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor IXO35_007190 PF07963 Prokaryotic N-terminal methylation motif IXO35_007200 PF00114 Pilin (bacterial filament) IXO35_007200 PF07963 Prokaryotic N-terminal methylation motif IXO35_007205 PF17757 UvrB interaction domain IXO35_007205 PF12344 Ultra-violet resistance protein B IXO35_007205 PF00271 Helicase conserved C-terminal domain IXO35_007205 PF04851 Type III restriction enzyme, res subunit IXO35_007205 PF02151 UvrB/uvrC motif IXO35_007240 PF03129 Anticodon binding domain IXO35_007240 PF02824 TGS domain IXO35_007240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IXO35_007240 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IXO35_007245 PF00707 Translation initiation factor IF-3, C-terminal domain IXO35_007245 PF05198 Translation initiation factor IF-3, N-terminal domain IXO35_007250 PF01632 Ribosomal protein L35 IXO35_007255 PF00453 Ribosomal protein L20 IXO35_007260 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IXO35_007260 PF01409 tRNA synthetases class II core domain (F) IXO35_007265 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IXO35_007265 PF01588 Putative tRNA binding domain IXO35_007265 PF03483 B3/4 domain IXO35_007265 PF03484 tRNA synthetase B5 domain IXO35_007265 PF03147 Ferredoxin-fold anticodon binding domain IXO35_007270 PF00216 Bacterial DNA-binding protein IXO35_007275 PF13411 MerR HTH family regulatory protein IXO35_007295 PF02397 Bacterial sugar transferase IXO35_007315 PF13439 Glycosyltransferase Family 4 IXO35_007315 PF00534 Glycosyl transferases group 1 IXO35_007325 PF14667 Polysaccharide biosynthesis C-terminal domain IXO35_007340 PF03808 Glycosyl transferase WecB/TagA/CpsF family IXO35_007375 PF08212 Lipocalin-like domain IXO35_007460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_007460 PF13426 PAS domain IXO35_007460 PF00072 Response regulator receiver domain IXO35_007465 PF04362 Bacterial Fe(2+) trafficking IXO35_007470 PF00633 Helix-hairpin-helix motif IXO35_007470 PF00730 HhH-GPD superfamily base excision DNA repair protein IXO35_007470 PF14815 NUDIX domain IXO35_007480 PF00448 SRP54-type protein, GTPase domain IXO35_007480 PF02881 SRP54-type protein, helical bundle domain IXO35_007490 PF05544 Proline racemase IXO35_007495 PF01266 FAD dependent oxidoreductase IXO35_007505 PF04324 BFD-like [2Fe-2S] binding domain IXO35_007505 PF07992 Pyridine nucleotide-disulphide oxidoreductase IXO35_007510 PF00701 Dihydrodipicolinate synthetase family IXO35_007515 PF00171 Aldehyde dehydrogenase family IXO35_007520 PF01321 Creatinase/Prolidase N-terminal domain IXO35_007520 PF00557 Metallopeptidase family M24 IXO35_007535 PF13520 Amino acid permease IXO35_007575 PF00082 Subtilase family IXO35_007575 PF09286 Pro-kumamolisin, activation domain IXO35_007585 PF07715 TonB-dependent Receptor Plug Domain IXO35_007585 PF00593 TonB dependent receptor IXO35_007590 PF07532 Bacterial Ig-like domain (group 4) IXO35_007595 PF04616 Glycosyl hydrolases family 43 IXO35_007610 PF00872 Transposase, Mutator family IXO35_007665 PF03454 MoeA C-terminal region (domain IV) IXO35_007665 PF00994 Probable molybdopterin binding domain IXO35_007665 PF03453 MoeA N-terminal region (domain I and II) IXO35_007670 PF12804 MobA-like NTP transferase domain IXO35_007695 PF10414 Sirohaem synthase dimerisation region IXO35_007695 PF14824 Sirohaem biosynthesis protein central IXO35_007695 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IXO35_007730 PF05598 Transposase domain (DUF772) IXO35_007730 PF01609 Transposase DDE domain IXO35_007735 PF01609 Transposase DDE domain IXO35_007735 PF05598 Transposase domain (DUF772) IXO35_007765 PF01609 Transposase DDE domain IXO35_007765 PF05598 Transposase domain (DUF772) IXO35_007770 PF01648 4'-phosphopantetheinyl transferase superfamily IXO35_007770 PF17837 4'-phosphopantetheinyl transferase N-terminal domain IXO35_007780 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IXO35_007780 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IXO35_007780 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IXO35_007790 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IXO35_007800 PF17773 UPF0176 acylphosphatase like domain IXO35_007800 PF00581 Rhodanese-like domain IXO35_007805 PF00196 Bacterial regulatory proteins, luxR family IXO35_007805 PF00072 Response regulator receiver domain IXO35_007815 PF12111 Polyribonucleotide phosphorylase C terminal IXO35_007815 PF10150 Ribonuclease E/G family IXO35_007815 PF00575 S1 RNA binding domain IXO35_007820 PF00849 RNA pseudouridylate synthase IXO35_007820 PF01479 S4 domain IXO35_007825 PF11737 Protein of unknown function (DUF3300) IXO35_007830 PF02535 ZIP Zinc transporter IXO35_007835 PF02535 ZIP Zinc transporter IXO35_007845 PF01329 Pterin 4 alpha carbinolamine dehydratase IXO35_007850 PF01106 NifU-like domain IXO35_007895 PF05598 Transposase domain (DUF772) IXO35_007895 PF01609 Transposase DDE domain IXO35_007930 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 IXO35_007935 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath IXO35_007940 PF05638 Type VI secretion system effector, Hcp IXO35_007945 PF07024 ImpE protein IXO35_007950 PF04965 Gene 25-like lysozyme IXO35_007955 PF05947 Type VI secretion system, TssF IXO35_007965 PF10431 C-terminal, D2-small domain, of ClpB protein IXO35_007965 PF17871 AAA lid domain IXO35_007965 PF07724 AAA domain (Cdc48 subfamily) IXO35_007965 PF00004 ATPase family associated with various cellular activities (AAA) IXO35_007990 PF04717 Type VI secretion system, phage-baseplate injector IXO35_007990 PF06715 Gp5 C-terminal repeat (3 copies) IXO35_008005 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE IXO35_008015 PF06744 Type VI secretion protein IcmF C-terminal IXO35_008015 PF14331 ImcF-related N-terminal domain IXO35_008015 PF06761 Intracellular multiplication and human macrophage-killing IXO35_008030 PF00069 Protein kinase domain IXO35_008030 PF03793 PASTA domain IXO35_008045 PF06812 ImpA, N-terminal, type VI secretion system IXO35_008050 PF03466 LysR substrate binding domain IXO35_008050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO35_008055 PF00512 His Kinase A (phospho-acceptor) domain IXO35_008055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_008060 PF00034 Cytochrome c IXO35_008060 PF03150 Di-haem cytochrome c peroxidase IXO35_008065 PF00072 Response regulator receiver domain IXO35_008065 PF00486 Transcriptional regulatory protein, C terminal IXO35_008115 PF00529 HlyD membrane-fusion protein of T1SS IXO35_008115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IXO35_008120 PF00873 AcrB/AcrD/AcrF family IXO35_008140 PF03377 TAL effector repeat IXO35_008155 PF03377 TAL effector repeat IXO35_008170 PF03377 TAL effector repeat IXO35_008180 PF03918 Cytochrome C biogenesis protein IXO35_008185 PF08534 Redoxin IXO35_008190 PF01578 Cytochrome C assembly protein IXO35_008190 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IXO35_008195 PF03100 CcmE IXO35_008200 PF04995 Heme exporter protein D (CcmD) IXO35_008205 PF01578 Cytochrome C assembly protein IXO35_008210 PF00082 Subtilase family IXO35_008220 PF04542 Sigma-70 region 2 IXO35_008220 PF08281 Sigma-70, region 4 IXO35_008230 PF00034 Cytochrome c IXO35_008245 PF05523 WxcM-like, C-terminal IXO35_008265 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IXO35_008270 PF01943 Polysaccharide biosynthesis protein IXO35_008275 PF00535 Glycosyl transferase family 2 IXO35_008290 PF08241 Methyltransferase domain IXO35_008310 PF13579 Glycosyl transferase 4-like domain IXO35_008310 PF00534 Glycosyl transferases group 1 IXO35_008325 PF00005 ABC transporter IXO35_008330 PF00664 ABC transporter transmembrane region IXO35_008330 PF00005 ABC transporter IXO35_008340 PF07690 Major Facilitator Superfamily IXO35_008350 PF00296 Luciferase-like monooxygenase IXO35_008365 PF03471 Transporter associated domain IXO35_008365 PF00571 CBS domain IXO35_008365 PF01595 Cyclin M transmembrane N-terminal domain IXO35_008375 PF01384 Phosphate transporter family IXO35_008395 PF01751 Toprim domain IXO35_008395 PF00204 DNA gyrase B IXO35_008395 PF00986 DNA gyrase B subunit, carboxyl terminus IXO35_008395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_008405 PF00117 Glutamine amidotransferase class-I IXO35_008405 PF06418 CTP synthase N-terminus IXO35_008410 PF00793 DAHP synthetase I family IXO35_008420 PF03952 Enolase, N-terminal domain IXO35_008420 PF00113 Enolase, C-terminal TIM barrel domain IXO35_008425 PF04977 Septum formation initiator IXO35_008430 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IXO35_008440 PF02542 YgbB family IXO35_008445 PF01142 tRNA pseudouridine synthase D (TruD) IXO35_008450 PF01713 Smr domain IXO35_008455 PF01975 Survival protein SurE IXO35_008465 PF09335 SNARE associated Golgi protein IXO35_008470 PF01476 LysM domain IXO35_008470 PF01551 Peptidase family M23 IXO35_008480 PF01985 CRS1 / YhbY (CRM) domain IXO35_008485 PF01728 FtsJ-like methyltransferase IXO35_008490 PF17862 AAA+ lid domain IXO35_008490 PF06480 FtsH Extracellular IXO35_008490 PF01434 Peptidase family M41 IXO35_008490 PF00004 ATPase family associated with various cellular activities (AAA) IXO35_008495 PF00809 Pterin binding enzyme IXO35_008505 PF17209 Hfq protein IXO35_008510 PF01926 50S ribosome-binding GTPase IXO35_008510 PF16360 GTP-binding GTPase Middle Region IXO35_008510 PF13167 GTP-binding GTPase N-terminal IXO35_008515 PF02464 Competence-damaged protein IXO35_008520 PF03109 ABC1 family IXO35_008525 PF00717 Peptidase S24-like IXO35_008525 PF01726 LexA DNA binding domain IXO35_008530 PF00154 recA bacterial DNA recombination protein IXO35_008535 PF02631 RecX family IXO35_008540 PF02272 DHHA1 domain IXO35_008540 PF01411 tRNA synthetases class II (A) IXO35_008540 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IXO35_008545 PF02599 Global regulator protein family IXO35_008570 PF03796 DnaB-like helicase C terminal domain IXO35_008570 PF00772 DnaB-like helicase N terminal domain IXO35_008600 PF02678 Pirin IXO35_008600 PF17954 Quercetinase C-terminal cupin domain IXO35_008605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO35_008605 PF03466 LysR substrate binding domain IXO35_008635 PF08543 Phosphomethylpyrimidine kinase IXO35_008645 PF02562 PhoH-like protein IXO35_008645 PF13638 PIN domain IXO35_008650 PF00578 AhpC/TSA family IXO35_008670 PF00701 Dihydrodipicolinate synthetase family IXO35_008680 PF11953 Domain of unknown function (DUF3470) IXO35_008680 PF00037 4Fe-4S binding domain IXO35_008685 PF05035 2-keto-3-deoxy-galactonokinase IXO35_008690 PF08450 SMP-30/Gluconolactonase/LRE-like region IXO35_008695 PF13378 Enolase C-terminal domain-like IXO35_008695 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IXO35_008700 PF01081 KDPG and KHG aldolase IXO35_008705 PF03466 LysR substrate binding domain IXO35_008705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO35_008715 PF16338 Domain of unknown function (DUF4968) IXO35_008715 PF17137 Domain of unknown function (DUF5110) IXO35_008715 PF01055 Glycosyl hydrolases family 31 IXO35_008725 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IXO35_008725 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IXO35_008735 PF00083 Sugar (and other) transporter IXO35_008755 PF01132 Elongation factor P (EF-P) OB domain IXO35_008755 PF08207 Elongation factor P (EF-P) KOW-like domain IXO35_008755 PF09285 Elongation factor P, C-terminal IXO35_008760 PF00106 short chain dehydrogenase IXO35_008765 PF00682 HMGL-like IXO35_008775 PF00378 Enoyl-CoA hydratase/isomerase IXO35_008785 PF07664 Ferrous iron transport protein B C terminus IXO35_008785 PF02421 Ferrous iron transport protein B IXO35_008785 PF07670 Nucleoside recognition IXO35_008805 PF00155 Aminotransferase class I and II IXO35_008810 PF03475 3-alpha domain IXO35_008810 PF03473 MOSC domain IXO35_008820 PF05173 Dihydrodipicolinate reductase, C-terminus IXO35_008820 PF01113 Dihydrodipicolinate reductase, N-terminus IXO35_008825 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IXO35_008825 PF00117 Glutamine amidotransferase class-I IXO35_008835 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IXO35_008835 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IXO35_008835 PF02142 MGS-like domain IXO35_008840 PF01272 Transcription elongation factor, GreA/GreB, C-term IXO35_008840 PF03449 Transcription elongation factor, N-terminal IXO35_008850 PF02272 DHHA1 domain IXO35_008850 PF17768 RecJ OB domain IXO35_008850 PF01368 DHH family IXO35_008885 PF01610 Transposase IXO35_008885 PF13542 Helix-turn-helix domain of transposase family ISL3 IXO35_008885 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 IXO35_008910 PF00152 tRNA synthetases class II (D, K and N) IXO35_008910 PF01336 OB-fold nucleic acid binding domain IXO35_008915 PF00072 Response regulator receiver domain IXO35_008920 PF00072 Response regulator receiver domain IXO35_008920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_008920 PF00512 His Kinase A (phospho-acceptor) domain IXO35_008920 PF01627 Hpt domain IXO35_008925 PF00378 Enoyl-CoA hydratase/isomerase IXO35_008930 PF00501 AMP-binding enzyme IXO35_008930 PF13193 AMP-binding enzyme C-terminal domain IXO35_008940 PF00694 Aconitase C-terminal domain IXO35_008940 PF00330 Aconitase family (aconitate hydratase) IXO35_008955 PF11791 Aconitate B N-terminal domain IXO35_008955 PF00330 Aconitase family (aconitate hydratase) IXO35_008955 PF06434 Aconitate hydratase 2 N-terminus IXO35_008960 PF00561 alpha/beta hydrolase fold IXO35_008970 PF00563 EAL domain IXO35_008970 PF03707 Bacterial signalling protein N terminal repeat IXO35_008970 PF00990 Diguanylate cyclase, GGDEF domain IXO35_008975 PF01339 CheB methylesterase IXO35_008975 PF00072 Response regulator receiver domain IXO35_008980 PF03975 CheD chemotactic sensory transduction IXO35_008985 PF01739 CheR methyltransferase, SAM binding domain IXO35_008985 PF03705 CheR methyltransferase, all-alpha domain IXO35_008990 PF00672 HAMP domain IXO35_008990 PF02203 Tar ligand binding domain homologue IXO35_008990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXO35_009025 PF01584 CheW-like domain IXO35_009030 PF07238 PilZ domain IXO35_009030 PF07317 Flagellar regulator YcgR IXO35_009040 PF00672 HAMP domain IXO35_009040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXO35_009040 PF02203 Tar ligand binding domain homologue IXO35_009045 PF02203 Tar ligand binding domain homologue IXO35_009045 PF00672 HAMP domain IXO35_009045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXO35_009050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXO35_009050 PF02203 Tar ligand binding domain homologue IXO35_009050 PF00672 HAMP domain IXO35_009055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXO35_009055 PF00672 HAMP domain IXO35_009055 PF02203 Tar ligand binding domain homologue IXO35_009065 PF00672 HAMP domain IXO35_009065 PF02203 Tar ligand binding domain homologue IXO35_009065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXO35_009075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXO35_009075 PF00672 HAMP domain IXO35_009075 PF02203 Tar ligand binding domain homologue IXO35_009100 PF01584 CheW-like domain IXO35_009100 PF09078 CheY binding IXO35_009100 PF02895 Signal transducing histidine kinase, homodimeric domain IXO35_009100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_009100 PF01627 Hpt domain IXO35_009105 PF00072 Response regulator receiver domain IXO35_009115 PF01584 CheW-like domain IXO35_009120 PF13614 AAA domain IXO35_009125 PF00691 OmpA family IXO35_009125 PF13677 Membrane MotB of proton-channel complex MotA/MotB IXO35_009130 PF01618 MotA/TolQ/ExbB proton channel family IXO35_009140 PF00593 TonB dependent receptor IXO35_009140 PF07715 TonB-dependent Receptor Plug Domain IXO35_009150 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IXO35_009150 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IXO35_009160 PF00593 TonB dependent receptor IXO35_009160 PF07715 TonB-dependent Receptor Plug Domain IXO35_009200 PF01609 Transposase DDE domain IXO35_009200 PF05598 Transposase domain (DUF772) IXO35_009250 PF04717 Type VI secretion system, phage-baseplate injector IXO35_009250 PF06715 Gp5 C-terminal repeat (3 copies) IXO35_009260 PF03377 TAL effector repeat IXO35_009265 PF04717 Type VI secretion system, phage-baseplate injector IXO35_009280 PF04717 Type VI secretion system, phage-baseplate injector IXO35_009330 PF01609 Transposase DDE domain IXO35_009330 PF05598 Transposase domain (DUF772) IXO35_009355 PF00145 C-5 cytosine-specific DNA methylase IXO35_009365 PF01609 Transposase DDE domain IXO35_009365 PF05598 Transposase domain (DUF772) IXO35_009375 PF05598 Transposase domain (DUF772) IXO35_009375 PF01609 Transposase DDE domain IXO35_009390 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IXO35_009395 PF00294 pfkB family carbohydrate kinase IXO35_009400 PF02896 PEP-utilising enzyme, TIM barrel domain IXO35_009400 PF00391 PEP-utilising enzyme, mobile domain IXO35_009400 PF00381 PTS HPr component phosphorylation site IXO35_009400 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IXO35_009400 PF05524 PEP-utilising enzyme, N-terminal IXO35_009405 PF00356 Bacterial regulatory proteins, lacI family IXO35_009430 PF00873 AcrB/AcrD/AcrF family IXO35_009435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IXO35_009435 PF00529 HlyD membrane-fusion protein of T1SS IXO35_009445 PF05088 Bacterial NAD-glutamate dehydrogenase IXO35_009450 PF01609 Transposase DDE domain IXO35_009450 PF05598 Transposase domain (DUF772) IXO35_009455 PF00072 Response regulator receiver domain IXO35_009460 PF00512 His Kinase A (phospho-acceptor) domain IXO35_009460 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IXO35_009460 PF00072 Response regulator receiver domain IXO35_009460 PF01627 Hpt domain IXO35_009460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_009460 PF00672 HAMP domain IXO35_009465 PF04286 Protein of unknown function (DUF445) IXO35_009475 PF00005 ABC transporter IXO35_009480 PF00202 Aminotransferase class-III IXO35_009490 PF07690 Major Facilitator Superfamily IXO35_009495 PF02634 FdhD/NarQ family IXO35_009500 PF00384 Molybdopterin oxidoreductase IXO35_009510 PF07690 Major Facilitator Superfamily IXO35_009510 PF00083 Sugar (and other) transporter IXO35_009515 PF00990 Diguanylate cyclase, GGDEF domain IXO35_009515 PF00072 Response regulator receiver domain IXO35_009520 PF01266 FAD dependent oxidoreductase IXO35_009525 PF00120 Glutamine synthetase, catalytic domain IXO35_009535 PF00120 Glutamine synthetase, catalytic domain IXO35_009545 PF13533 Biotin-lipoyl like IXO35_009550 PF07690 Major Facilitator Superfamily IXO35_009555 PF02321 Outer membrane efflux protein IXO35_009560 PF00005 ABC transporter IXO35_009560 PF08402 TOBE domain IXO35_009590 PF00171 Aldehyde dehydrogenase family IXO35_009605 PF00571 CBS domain IXO35_009605 PF03471 Transporter associated domain IXO35_009615 PF02130 Uncharacterized protein family UPF0054 IXO35_009625 PF02562 PhoH-like protein IXO35_009630 PF04055 Radical SAM superfamily IXO35_009630 PF01938 TRAM domain IXO35_009630 PF00919 Uncharacterized protein family UPF0004 IXO35_009650 PF01464 Transglycosylase SLT domain IXO35_009655 PF00355 Rieske [2Fe-2S] domain IXO35_009655 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal IXO35_009660 PF00033 Cytochrome b/b6/petB IXO35_009660 PF00032 Cytochrome b(C-terminal)/b6/petD IXO35_009665 PF02167 Cytochrome C1 family IXO35_009670 PF02798 Glutathione S-transferase, N-terminal domain IXO35_009670 PF00043 Glutathione S-transferase, C-terminal domain IXO35_009675 PF04386 Stringent starvation protein B IXO35_009710 PF00872 Transposase, Mutator family IXO35_009725 PF01619 Proline dehydrogenase IXO35_009725 PF14850 DNA-binding domain of Proline dehydrogenase IXO35_009725 PF18327 Proline utilization A proline dehydrogenase N-terminal domain IXO35_009725 PF00171 Aldehyde dehydrogenase family IXO35_009775 PF04679 ATP dependent DNA ligase C terminal region IXO35_009775 PF13298 DNA polymerase Ligase (LigD) IXO35_009775 PF01068 ATP dependent DNA ligase domain IXO35_009780 PF00570 HRDC domain IXO35_009780 PF01612 3'-5' exonuclease IXO35_009790 PF03781 Sulfatase-modifying factor enzyme 1 IXO35_009805 PF02601 Exonuclease VII, large subunit IXO35_009805 PF13742 OB-fold nucleic acid binding domain IXO35_009810 PF08331 Domain of unknown function (DUF1730) IXO35_009815 PF01256 Carbohydrate kinase IXO35_009815 PF03853 YjeF-related protein N-terminus IXO35_009820 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE IXO35_009825 PF01520 N-acetylmuramoyl-L-alanine amidase IXO35_009825 PF11741 AMIN domain IXO35_009830 PF01119 DNA mismatch repair protein, C-terminal domain IXO35_009830 PF08676 MutL C terminal dimerisation domain IXO35_009845 PF05233 PHB accumulation regulatory domain IXO35_009845 PF07879 PHB/PHA accumulation regulator DNA-binding domain IXO35_009850 PF00106 short chain dehydrogenase IXO35_009855 PF00749 tRNA synthetases class I (E and Q), catalytic domain IXO35_009860 PF01435 Peptidase family M48 IXO35_009865 PF00563 EAL domain IXO35_009865 PF00990 Diguanylate cyclase, GGDEF domain IXO35_009865 PF00072 Response regulator receiver domain IXO35_009875 PF07152 YaeQ protein IXO35_009880 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 IXO35_009885 PF00313 'Cold-shock' DNA-binding domain IXO35_009890 PF02798 Glutathione S-transferase, N-terminal domain IXO35_009890 PF14497 Glutathione S-transferase, C-terminal domain IXO35_009900 PF02696 Uncharacterized ACR, YdiU/UPF0061 family IXO35_009905 PF00156 Phosphoribosyl transferase domain IXO35_009910 PF03880 DbpA RNA binding domain IXO35_009910 PF00270 DEAD/DEAH box helicase IXO35_009910 PF00271 Helicase conserved C-terminal domain IXO35_009915 PF00005 ABC transporter IXO35_009915 PF16326 ABC transporter C-terminal domain IXO35_009915 PF12848 ABC transporter IXO35_009930 PF00545 ribonuclease IXO35_009935 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IXO35_009935 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IXO35_009940 PF00459 Inositol monophosphatase family IXO35_009945 PF00588 SpoU rRNA Methylase family IXO35_009955 PF00563 EAL domain IXO35_009955 PF00990 Diguanylate cyclase, GGDEF domain IXO35_009955 PF03707 Bacterial signalling protein N terminal repeat IXO35_009955 PF13188 PAS domain IXO35_009960 PF04055 Radical SAM superfamily IXO35_009965 PF01132 Elongation factor P (EF-P) OB domain IXO35_009965 PF09285 Elongation factor P, C-terminal IXO35_009965 PF08207 Elongation factor P (EF-P) KOW-like domain IXO35_009975 PF01979 Amidohydrolase family IXO35_009985 PF13419 Haloacid dehalogenase-like hydrolase IXO35_009995 PF00295 Glycosyl hydrolases family 28 IXO35_010005 PF01095 Pectinesterase IXO35_010025 PF01551 Peptidase family M23 IXO35_010025 PF08460 Bacterial SH3 domain IXO35_010030 PF01979 Amidohydrolase family IXO35_010035 PF01809 Putative membrane protein insertion efficiency factor IXO35_010040 PF01258 Prokaryotic dksA/traR C4-type zinc finger IXO35_010055 PF02657 Fe-S metabolism associated domain IXO35_010060 PF09190 DALR domain IXO35_010060 PF01406 tRNA synthetases class I (C) catalytic domain IXO35_010070 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IXO35_010070 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IXO35_010075 PF00764 Arginosuccinate synthase IXO35_010085 PF07687 Peptidase dimerisation domain IXO35_010085 PF01546 Peptidase family M20/M25/M40 IXO35_010090 PF00696 Amino acid kinase family IXO35_010090 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase IXO35_010100 PF01118 Semialdehyde dehydrogenase, NAD binding domain IXO35_010105 PF00206 Lyase IXO35_010120 PF01472 PUA domain IXO35_010120 PF00696 Amino acid kinase family IXO35_010125 PF00171 Aldehyde dehydrogenase family IXO35_010130 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain IXO35_010130 PF02129 X-Pro dipeptidyl-peptidase (S15 family) IXO35_010160 PF01609 Transposase DDE domain IXO35_010160 PF05598 Transposase domain (DUF772) IXO35_010175 PF00664 ABC transporter transmembrane region IXO35_010175 PF00005 ABC transporter IXO35_010180 PF00664 ABC transporter transmembrane region IXO35_010180 PF00005 ABC transporter IXO35_010190 PF01609 Transposase DDE domain IXO35_010190 PF05598 Transposase domain (DUF772) IXO35_010235 PF00034 Cytochrome c IXO35_010265 PF00873 AcrB/AcrD/AcrF family IXO35_010285 PF01609 Transposase DDE domain IXO35_010285 PF05598 Transposase domain (DUF772) IXO35_010300 PF05593 RHS Repeat IXO35_010300 PF03527 RHS protein IXO35_010310 PF01609 Transposase DDE domain IXO35_010310 PF05598 Transposase domain (DUF772) IXO35_010345 PF00072 Response regulator receiver domain IXO35_010345 PF01627 Hpt domain IXO35_010345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_010345 PF02895 Signal transducing histidine kinase, homodimeric domain IXO35_010345 PF01584 CheW-like domain IXO35_010350 PF04344 Chemotaxis phosphatase, CheZ IXO35_010355 PF00072 Response regulator receiver domain IXO35_010360 PF04542 Sigma-70 region 2 IXO35_010360 PF04539 Sigma-70 region 3 IXO35_010360 PF04545 Sigma-70, region 4 IXO35_010365 PF10609 NUBPL iron-transfer P-loop NTPase IXO35_010370 PF00448 SRP54-type protein, GTPase domain IXO35_010375 PF00771 FHIPEP family IXO35_010380 PF01312 FlhB HrpN YscU SpaS Family IXO35_010385 PF03707 Bacterial signalling protein N terminal repeat IXO35_010385 PF00990 Diguanylate cyclase, GGDEF domain IXO35_010385 PF00563 EAL domain IXO35_010390 PF00990 Diguanylate cyclase, GGDEF domain IXO35_010395 PF00990 Diguanylate cyclase, GGDEF domain IXO35_010400 PF01311 Bacterial export proteins, family 1 IXO35_010405 PF01313 Bacterial export proteins, family 3 IXO35_010410 PF00813 FliP family IXO35_010415 PF04347 Flagellar biosynthesis protein, FliO IXO35_010420 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IXO35_010425 PF02154 Flagellar motor switch protein FliM IXO35_010425 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IXO35_010445 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IXO35_010445 PF18269 T3SS EscN ATPase C-terminal domain IXO35_010455 PF01706 FliG C-terminal domain IXO35_010455 PF14841 FliG middle domain IXO35_010455 PF14842 FliG N-terminal domain IXO35_010460 PF08345 Flagellar M-ring protein C-terminal IXO35_010460 PF01514 Secretory protein of YscJ/FliF family IXO35_010465 PF02049 Flagellar hook-basal body complex protein FliE IXO35_010475 PF00535 Glycosyl transferase family 2 IXO35_010475 PF00534 Glycosyl transferases group 1 IXO35_010510 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IXO35_010510 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IXO35_010520 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IXO35_010525 PF06490 Flagellar regulatory protein FleQ IXO35_010525 PF02954 Bacterial regulatory protein, Fis family IXO35_010525 PF00158 Sigma-54 interaction domain IXO35_010530 PF01339 CheB methylesterase IXO35_010530 PF00072 Response regulator receiver domain IXO35_010535 PF00309 Sigma-54 factor, Activator interacting domain (AID) IXO35_010535 PF04963 Sigma-54 factor, core binding domain IXO35_010535 PF04552 Sigma-54, DNA binding domain IXO35_010540 PF00196 Bacterial regulatory proteins, luxR family IXO35_010540 PF00072 Response regulator receiver domain IXO35_010555 PF02561 Flagellar protein FliS IXO35_010560 PF02465 Flagellar hook-associated protein 2 N-terminus IXO35_010560 PF07196 Flagellin hook IN motif IXO35_010560 PF07195 Flagellar hook-associated protein 2 C-terminus IXO35_010565 PF00700 Bacterial flagellin C-terminal helical region IXO35_010565 PF00669 Bacterial flagellin N-terminal helical region IXO35_010575 PF07196 Flagellin hook IN motif IXO35_010575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IXO35_010580 PF10135 Rod binding protein IXO35_010580 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase IXO35_010585 PF02119 Flagellar P-ring protein IXO35_010590 PF02107 Flagellar L-ring protein IXO35_010595 PF00460 Flagella basal body rod protein IXO35_010595 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IXO35_010605 PF00460 Flagella basal body rod protein IXO35_010605 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IXO35_010610 PF07559 Flagellar basal body protein FlaE IXO35_010610 PF00460 Flagella basal body rod protein IXO35_010610 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IXO35_010615 PF03963 Flagellar hook capping protein - N-terminal region IXO35_010620 PF00460 Flagella basal body rod protein IXO35_010620 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IXO35_010630 PF01584 CheW-like domain IXO35_010630 PF00072 Response regulator receiver domain IXO35_010650 PF13426 PAS domain IXO35_010650 PF13188 PAS domain IXO35_010650 PF00989 PAS fold IXO35_010650 PF00512 His Kinase A (phospho-acceptor) domain IXO35_010650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_010655 PF00563 EAL domain IXO35_010655 PF03707 Bacterial signalling protein N terminal repeat IXO35_010655 PF00990 Diguanylate cyclase, GGDEF domain IXO35_010660 PF07730 Histidine kinase IXO35_010660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_010665 PF00563 EAL domain IXO35_010665 PF00990 Diguanylate cyclase, GGDEF domain IXO35_010665 PF08447 PAS fold IXO35_010665 PF08448 PAS fold IXO35_010680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXO35_010680 PF12729 Four helix bundle sensory module for signal transduction IXO35_010680 PF00672 HAMP domain IXO35_010685 PF04356 Protein of unknown function (DUF489) IXO35_010695 PF00293 NUDIX domain IXO35_010705 PF02617 ATP-dependent Clp protease adaptor protein ClpS IXO35_010710 PF10431 C-terminal, D2-small domain, of ClpB protein IXO35_010710 PF02861 Clp amino terminal domain, pathogenicity island component IXO35_010710 PF17871 AAA lid domain IXO35_010710 PF07724 AAA domain (Cdc48 subfamily) IXO35_010710 PF00004 ATPase family associated with various cellular activities (AAA) IXO35_010715 PF01176 Translation initiation factor 1A / IF-1 IXO35_010720 PF03588 Leucyl/phenylalanyl-tRNA protein transferase IXO35_010735 PF07992 Pyridine nucleotide-disulphide oxidoreductase IXO35_010740 PF09397 Ftsk gamma domain IXO35_010740 PF17854 FtsK alpha domain IXO35_010740 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IXO35_010740 PF01580 FtsK/SpoIIIE family IXO35_010750 PF03548 Outer membrane lipoprotein carrier protein LolA IXO35_010760 PF00004 ATPase family associated with various cellular activities (AAA) IXO35_010760 PF16193 AAA C-terminal domain IXO35_010760 PF12002 MgsA AAA+ ATPase C terminal IXO35_010770 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IXO35_010780 PF00654 Voltage gated chloride channel IXO35_010785 PF00108 Thiolase, N-terminal domain IXO35_010785 PF02803 Thiolase, C-terminal domain IXO35_010790 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IXO35_010790 PF00378 Enoyl-CoA hydratase/isomerase IXO35_010790 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IXO35_010800 PF00334 Nucleoside diphosphate kinase IXO35_010805 PF04055 Radical SAM superfamily IXO35_010815 PF13464 Domain of unknown function (DUF4115) IXO35_010825 PF01011 PQQ enzyme repeat IXO35_010825 PF13360 PQQ-like domain IXO35_010830 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IXO35_010830 PF01926 50S ribosome-binding GTPase IXO35_010835 PF03454 MoeA C-terminal region (domain IV) IXO35_010835 PF00994 Probable molybdopterin binding domain IXO35_010835 PF03453 MoeA N-terminal region (domain I and II) IXO35_010875 PF05598 Transposase domain (DUF772) IXO35_010890 PF00899 ThiF family IXO35_010935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_010935 PF00183 Hsp90 protein IXO35_010945 PF01467 Cytidylyltransferase-like IXO35_010960 PF00037 4Fe-4S binding domain IXO35_010990 PF05598 Transposase domain (DUF772) IXO35_010990 PF01609 Transposase DDE domain IXO35_011055 PF02547 Queuosine biosynthesis protein IXO35_011060 PF01702 Queuine tRNA-ribosyltransferase IXO35_011065 PF02699 Preprotein translocase subunit IXO35_011070 PF07549 SecD/SecF GG Motif IXO35_011070 PF13721 SecD export protein N-terminal TM region IXO35_011070 PF02355 Protein export membrane protein IXO35_011075 PF07549 SecD/SecF GG Motif IXO35_011075 PF02355 Protein export membrane protein IXO35_011080 PF13495 Phage integrase, N-terminal SAM-like domain IXO35_011080 PF00589 Phage integrase family IXO35_011115 PF00929 Exonuclease IXO35_011125 PF01895 PhoU domain IXO35_011130 PF00005 ABC transporter IXO35_011135 PF00528 Binding-protein-dependent transport system inner membrane component IXO35_011140 PF00528 Binding-protein-dependent transport system inner membrane component IXO35_011145 PF12849 PBP superfamily domain IXO35_011150 PF12849 PBP superfamily domain IXO35_011180 PF00484 Carbonic anhydrase IXO35_011190 PF00730 HhH-GPD superfamily base excision DNA repair protein IXO35_011190 PF00633 Helix-hairpin-helix motif IXO35_011190 PF10576 Iron-sulfur binding domain of endonuclease III IXO35_011200 PF00378 Enoyl-CoA hydratase/isomerase IXO35_011205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IXO35_011205 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IXO35_011210 PF00293 NUDIX domain IXO35_011215 PF00581 Rhodanese-like domain IXO35_011255 PF01170 Putative RNA methylase family UPF0020 IXO35_011255 PF02926 THUMP domain IXO35_011255 PF10672 S-adenosylmethionine-dependent methyltransferase IXO35_011265 PF01513 ATP-NAD kinase IXO35_011280 PF00248 Aldo/keto reductase family IXO35_011290 PF08411 Exonuclease C-terminal IXO35_011290 PF00929 Exonuclease IXO35_011295 PF01494 FAD binding domain IXO35_011300 PF00266 Aminotransferase class-V IXO35_011315 PF06052 3-hydroxyanthranilic acid dioxygenase IXO35_011320 PF00484 Carbonic anhydrase IXO35_011345 PF00152 tRNA synthetases class II (D, K and N) IXO35_011345 PF01336 OB-fold nucleic acid binding domain IXO35_011350 PF01521 Iron-sulphur cluster biosynthesis IXO35_011355 PF01250 Ribosomal protein S6 IXO35_011360 PF01084 Ribosomal protein S18 IXO35_011365 PF01281 Ribosomal protein L9, N-terminal domain IXO35_011365 PF03948 Ribosomal protein L9, C-terminal domain IXO35_011370 PF02463 RecF/RecN/SMC N terminal domain IXO35_011375 PF04354 ZipA, C-terminal FtsZ-binding domain IXO35_011385 PF12826 Helix-hairpin-helix motif IXO35_011385 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IXO35_011385 PF01653 NAD-dependent DNA ligase adenylation domain IXO35_011385 PF03120 NAD-dependent DNA ligase OB-fold domain IXO35_011385 PF00533 BRCA1 C Terminus (BRCT) domain IXO35_011390 PF00152 tRNA synthetases class II (D, K and N) IXO35_011410 PF01008 Initiation factor 2 subunit family IXO35_011415 PF03989 DNA gyrase C-terminal domain, beta-propeller IXO35_011415 PF00521 DNA gyrase/topoisomerase IV, subunit A IXO35_011435 PF17392 Urocanase C-terminal domain IXO35_011435 PF17391 Urocanase N-terminal domain IXO35_011435 PF01175 Urocanase Rossmann-like domain IXO35_011445 PF00221 Aromatic amino acid lyase IXO35_011450 PF07969 Amidohydrolase family IXO35_011460 PF00392 Bacterial regulatory proteins, gntR family IXO35_011460 PF07702 UTRA domain IXO35_011485 PF01794 Ferric reductase like transmembrane component IXO35_011490 PF00174 Oxidoreductase molybdopterin binding domain IXO35_011495 PF00266 Aminotransferase class-V IXO35_011500 PF01817 Chorismate mutase type II IXO35_011500 PF01842 ACT domain IXO35_011500 PF00800 Prephenate dehydratase IXO35_011505 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IXO35_011530 PF12951 Passenger-associated-transport-repeat IXO35_011535 PF00196 Bacterial regulatory proteins, luxR family IXO35_011535 PF00072 Response regulator receiver domain IXO35_011540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_011540 PF00512 His Kinase A (phospho-acceptor) domain IXO35_011540 PF08448 PAS fold IXO35_011540 PF13426 PAS domain IXO35_011540 PF00072 Response regulator receiver domain IXO35_011545 PF02321 Outer membrane efflux protein IXO35_011550 PF00873 AcrB/AcrD/AcrF family IXO35_011555 PF13533 Biotin-lipoyl like IXO35_011560 PF00082 Subtilase family IXO35_011560 PF03797 Autotransporter beta-domain IXO35_011565 PF05598 Transposase domain (DUF772) IXO35_011580 PF01520 N-acetylmuramoyl-L-alanine amidase IXO35_011585 PF02649 Type I GTP cyclohydrolase folE2 IXO35_011595 PF01743 Poly A polymerase head domain IXO35_011595 PF12626 Polymerase A arginine-rich C-terminus IXO35_011595 PF12627 Probable RNA and SrmB- binding site of polymerase A IXO35_011600 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IXO35_011605 PF02548 Ketopantoate hydroxymethyltransferase IXO35_011610 PF02569 Pantoate-beta-alanine ligase IXO35_011615 PF02261 Aspartate decarboxylase IXO35_011620 PF00342 Phosphoglucose isomerase IXO35_011640 PF14310 Fibronectin type III-like domain IXO35_011640 PF00933 Glycosyl hydrolase family 3 N terminal domain IXO35_011640 PF01915 Glycosyl hydrolase family 3 C-terminal domain IXO35_011650 PF00474 Sodium:solute symporter family IXO35_011660 PF00563 EAL domain IXO35_011660 PF01590 GAF domain IXO35_011660 PF00990 Diguanylate cyclase, GGDEF domain IXO35_011660 PF00360 Phytochrome region IXO35_011675 PF14310 Fibronectin type III-like domain IXO35_011675 PF00933 Glycosyl hydrolase family 3 N terminal domain IXO35_011675 PF01915 Glycosyl hydrolase family 3 C-terminal domain IXO35_011710 PF12802 MarR family IXO35_011720 PF08281 Sigma-70, region 4 IXO35_011720 PF04542 Sigma-70 region 2 IXO35_011745 PF00255 Glutathione peroxidase IXO35_011750 PF00175 Oxidoreductase NAD-binding domain IXO35_011750 PF00970 Oxidoreductase FAD-binding domain IXO35_011755 PF00005 ABC transporter IXO35_011760 PF05683 Fumarase C-terminus IXO35_011760 PF05681 Fumarate hydratase (Fumerase) IXO35_011780 PF02253 Phospholipase A1 IXO35_011805 PF00990 Diguanylate cyclase, GGDEF domain IXO35_011825 PF01609 Transposase DDE domain IXO35_011825 PF05598 Transposase domain (DUF772) IXO35_011840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_011840 PF00512 His Kinase A (phospho-acceptor) domain IXO35_011840 PF01627 Hpt domain IXO35_011840 PF00072 Response regulator receiver domain IXO35_011840 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IXO35_011840 PF00672 HAMP domain IXO35_011880 PF01081 KDPG and KHG aldolase IXO35_011885 PF00920 Dehydratase family IXO35_011890 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase IXO35_011895 PF02685 Glucokinase IXO35_011900 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain IXO35_011900 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain IXO35_011905 PF00005 ABC transporter IXO35_011905 PF17912 MalK OB fold domain IXO35_011915 PF01571 Aminomethyltransferase folate-binding domain IXO35_011925 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IXO35_011930 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IXO35_011935 PF02910 Fumarate reductase flavoprotein C-term IXO35_011935 PF00890 FAD binding domain IXO35_011945 PF13085 2Fe-2S iron-sulfur cluster binding domain IXO35_011950 PF03937 Flavinator of succinate dehydrogenase IXO35_011960 PF12704 MacB-like periplasmic core domain IXO35_011960 PF02687 FtsX-like permease family IXO35_011965 PF00005 ABC transporter IXO35_011980 PF00753 Metallo-beta-lactamase superfamily IXO35_011980 PF03772 Competence protein IXO35_011985 PF01618 MotA/TolQ/ExbB proton channel family IXO35_011995 PF00005 ABC transporter IXO35_011995 PF00664 ABC transporter transmembrane region IXO35_012000 PF02606 Tetraacyldisaccharide-1-P 4'-kinase IXO35_012005 PF02348 Cytidylyltransferase IXO35_012010 PF01451 Low molecular weight phosphotyrosine protein phosphatase IXO35_012020 PF08459 UvrC Helix-hairpin-helix N-terminal IXO35_012020 PF02151 UvrB/uvrC motif IXO35_012020 PF01541 GIY-YIG catalytic domain IXO35_012025 PF01066 CDP-alcohol phosphatidyltransferase IXO35_012045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IXO35_012055 PF00872 Transposase, Mutator family IXO35_012075 PF05598 Transposase domain (DUF772) IXO35_012075 PF01609 Transposase DDE domain IXO35_012090 PF13333 Integrase core domain IXO35_012090 PF13276 HTH-like domain IXO35_012090 PF00665 Integrase core domain IXO35_012100 PF03377 TAL effector repeat IXO35_012150 PF02810 SEC-C motif IXO35_012150 PF07517 SecA DEAD-like domain IXO35_012150 PF01043 SecA preprotein cross-linking domain IXO35_012150 PF07516 SecA Wing and Scaffold domain IXO35_012245 PF17091 Inovirus G7P protein IXO35_012355 PF03377 TAL effector repeat IXO35_012380 PF01502 Phosphoribosyl-AMP cyclohydrolase IXO35_012380 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase IXO35_012385 PF00977 Histidine biosynthesis protein IXO35_012390 PF00977 Histidine biosynthesis protein IXO35_012395 PF00117 Glutamine amidotransferase class-I IXO35_012400 PF00475 Imidazoleglycerol-phosphate dehydratase IXO35_012405 PF00155 Aminotransferase class I and II IXO35_012410 PF00815 Histidinol dehydrogenase IXO35_012415 PF01634 ATP phosphoribosyltransferase IXO35_012415 PF08029 HisG, C-terminal domain IXO35_012435 PF13393 Histidyl-tRNA synthetase IXO35_012435 PF03129 Anticodon binding domain IXO35_012455 PF14821 Threonine synthase N terminus IXO35_012455 PF00291 Pyridoxal-phosphate dependent enzyme IXO35_012470 PF08544 GHMP kinases C terminal IXO35_012470 PF00288 GHMP kinases N terminal domain IXO35_012475 PF03447 Homoserine dehydrogenase, NAD binding domain IXO35_012475 PF00742 Homoserine dehydrogenase IXO35_012475 PF13840 ACT domain IXO35_012475 PF01842 ACT domain IXO35_012475 PF00696 Amino acid kinase family IXO35_012495 PF00171 Aldehyde dehydrogenase family IXO35_012510 PF01180 Dihydroorotate dehydrogenase IXO35_012515 PF01565 FAD binding domain IXO35_012515 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IXO35_012520 PF00892 EamA-like transporter family IXO35_012525 PF01177 Asp/Glu/Hydantoin racemase IXO35_012540 PF07690 Major Facilitator Superfamily IXO35_012550 PF01569 PAP2 superfamily IXO35_012555 PF04551 GcpE protein IXO35_012565 PF00072 Response regulator receiver domain IXO35_012580 PF16921 Tex protein YqgF-like domain IXO35_012580 PF00575 S1 RNA binding domain IXO35_012580 PF17674 HHH domain IXO35_012580 PF09371 Tex-like protein N-terminal domain IXO35_012590 PF00355 Rieske [2Fe-2S] domain IXO35_012590 PF01266 FAD dependent oxidoreductase IXO35_012605 PF00561 alpha/beta hydrolase fold IXO35_012615 PF01066 CDP-alcohol phosphatidyltransferase IXO35_012635 PF03618 Kinase/pyrophosphorylase IXO35_012640 PF00391 PEP-utilising enzyme, mobile domain IXO35_012640 PF02896 PEP-utilising enzyme, TIM barrel domain IXO35_012640 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain IXO35_012645 PF00924 Mechanosensitive ion channel IXO35_012645 PF05552 Conserved TM helix IXO35_012650 PF00929 Exonuclease IXO35_012655 PF14437 MafB19-like deaminase IXO35_012660 PF02742 Iron dependent repressor, metal binding and dimerisation domain IXO35_012660 PF01325 Iron dependent repressor, N-terminal DNA binding domain IXO35_012665 PF01566 Natural resistance-associated macrophage protein IXO35_012690 PF03601 Conserved hypothetical protein 698 IXO35_012715 PF03466 LysR substrate binding domain IXO35_012715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO35_012720 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus IXO35_012720 PF00361 Proton-conducting membrane transporter IXO35_012720 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IXO35_012725 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) IXO35_012730 PF02540 NAD synthase IXO35_012730 PF00958 GMP synthase C terminal domain IXO35_012730 PF00117 Glutamine amidotransferase class-I IXO35_012735 PF00571 CBS domain IXO35_012735 PF00478 IMP dehydrogenase / GMP reductase domain IXO35_012740 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IXO35_012740 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IXO35_012760 PF00483 Nucleotidyl transferase IXO35_012765 PF02719 Polysaccharide biosynthesis protein IXO35_012770 PF00953 Glycosyl transferase family 4 IXO35_012775 PF18073 Rubredoxin metal binding domain IXO35_012785 PF00216 Bacterial DNA-binding protein IXO35_012790 PF00575 S1 RNA binding domain IXO35_012795 PF02224 Cytidylate kinase IXO35_012800 PF00444 Ribosomal protein L36 IXO35_012810 PF04371 Porphyromonas-type peptidyl-arginine deiminase IXO35_012820 PF00795 Carbon-nitrogen hydrolase IXO35_012845 PF00528 Binding-protein-dependent transport system inner membrane component IXO35_012850 PF00528 Binding-protein-dependent transport system inner membrane component IXO35_012880 PF03795 YCII-related domain IXO35_012885 PF02616 Segregation and condensation protein ScpA IXO35_012890 PF04079 Segregation and condensation complex subunit ScpB IXO35_012895 PF01479 S4 domain IXO35_012895 PF00849 RNA pseudouridylate synthase IXO35_012915 PF00795 Carbon-nitrogen hydrolase IXO35_012920 PF00155 Aminotransferase class I and II IXO35_012925 PF00005 ABC transporter IXO35_012930 PF03379 CcmB protein IXO35_012935 PF01578 Cytochrome C assembly protein IXO35_012945 PF03100 CcmE IXO35_012950 PF01578 Cytochrome C assembly protein IXO35_012950 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IXO35_012955 PF08534 Redoxin IXO35_012960 PF03918 Cytochrome C biogenesis protein IXO35_012985 PF01565 FAD binding domain IXO35_012985 PF02913 FAD linked oxidases, C-terminal domain IXO35_012990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IXO35_012990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IXO35_013000 PF13520 Amino acid permease IXO35_013005 PF13520 Amino acid permease IXO35_013010 PF00596 Class II Aldolase and Adducin N-terminal domain IXO35_013015 PF03079 ARD/ARD' family IXO35_013045 PF03377 TAL effector repeat IXO35_013060 PF03377 TAL effector repeat IXO35_013075 PF03377 TAL effector repeat IXO35_013095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO35_013095 PF03466 LysR substrate binding domain IXO35_013100 PF02525 Flavodoxin-like fold IXO35_013105 PF05598 Transposase domain (DUF772) IXO35_013105 PF01609 Transposase DDE domain IXO35_013125 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IXO35_013125 PF02403 Seryl-tRNA synthetase N-terminal domain IXO35_013130 PF03544 Gram-negative bacterial TonB protein C-terminal IXO35_013190 PF00561 alpha/beta hydrolase fold IXO35_013205 PF01609 Transposase DDE domain IXO35_013205 PF05598 Transposase domain (DUF772) IXO35_013215 PF08032 RNA 2'-O ribose methyltransferase substrate binding IXO35_013215 PF00588 SpoU rRNA Methylase family IXO35_013235 PF17876 Cold shock domain IXO35_013235 PF08461 Ribonuclease R winged-helix domain IXO35_013235 PF08206 Ribonuclease B OB domain IXO35_013235 PF00773 RNB domain IXO35_013235 PF00575 S1 RNA binding domain IXO35_013260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IXO35_013260 PF02770 Acyl-CoA dehydrogenase, middle domain IXO35_013260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IXO35_013265 PF01209 ubiE/COQ5 methyltransferase family IXO35_013270 PF00809 Pterin binding enzyme IXO35_013270 PF02574 Homocysteine S-methyltransferase IXO35_013275 PF02574 Homocysteine S-methyltransferase IXO35_013275 PF02965 Vitamin B12 dependent methionine synthase, activation domain IXO35_013275 PF02607 B12 binding domain IXO35_013275 PF02310 B12 binding domain IXO35_013275 PF00809 Pterin binding enzyme IXO35_013285 PF00294 pfkB family carbohydrate kinase IXO35_013290 PF07690 Major Facilitator Superfamily IXO35_013295 PF00356 Bacterial regulatory proteins, lacI family IXO35_013310 PF04102 SlyX IXO35_013315 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IXO35_013315 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IXO35_013315 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IXO35_013320 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IXO35_013320 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IXO35_013325 PF00255 Glutathione peroxidase IXO35_013335 PF00392 Bacterial regulatory proteins, gntR family IXO35_013340 PF00005 ABC transporter IXO35_013370 PF10415 Fumarase C C-terminus IXO35_013370 PF00206 Lyase IXO35_013385 PF08328 Adenylosuccinate lyase C-terminal IXO35_013385 PF00206 Lyase IXO35_013405 PF08007 Cupin superfamily protein IXO35_013415 PF16078 2-oxoglutarate dehydrogenase N-terminus IXO35_013415 PF00676 Dehydrogenase E1 component IXO35_013415 PF16870 2-oxoglutarate dehydrogenase C-terminal IXO35_013415 PF02779 Transketolase, pyrimidine binding domain IXO35_013420 PF00364 Biotin-requiring enzyme IXO35_013420 PF02817 e3 binding domain IXO35_013420 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IXO35_013425 PF07992 Pyridine nucleotide-disulphide oxidoreductase IXO35_013425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IXO35_013430 PF03641 Possible lysine decarboxylase IXO35_013435 PF01205 Uncharacterized protein family UPF0029 IXO35_013440 PF00664 ABC transporter transmembrane region IXO35_013440 PF00005 ABC transporter IXO35_013455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO35_013455 PF03466 LysR substrate binding domain IXO35_013470 PF01817 Chorismate mutase type II IXO35_013470 PF02153 Prephenate dehydrogenase IXO35_013475 PF08543 Phosphomethylpyrimidine kinase IXO35_013480 PF01556 DnaJ C terminal domain IXO35_013480 PF00226 DnaJ domain IXO35_013480 PF00684 DnaJ central domain IXO35_013485 PF00012 Hsp70 protein IXO35_013490 PF01025 GrpE IXO35_013495 PF01628 HrcA protein C terminal domain IXO35_013495 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding IXO35_013500 PF02463 RecF/RecN/SMC N terminal domain IXO35_013505 PF01475 Ferric uptake regulator family IXO35_013510 PF04355 SmpA / OmlA family IXO35_013515 PF03658 RnfH family Ubiquitin IXO35_013520 PF03364 Polyketide cyclase / dehydrase and lipid transport IXO35_013525 PF01668 SmpB protein IXO35_013540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IXO35_013540 PF12806 Acetyl-CoA dehydrogenase C-terminal like IXO35_013540 PF02770 Acyl-CoA dehydrogenase, middle domain IXO35_013540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IXO35_013550 PF02780 Transketolase, C-terminal domain IXO35_013550 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IXO35_013550 PF02779 Transketolase, pyrimidine binding domain IXO35_013605 PF07690 Major Facilitator Superfamily IXO35_013610 PF00529 HlyD membrane-fusion protein of T1SS IXO35_013610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IXO35_013615 PF02321 Outer membrane efflux protein IXO35_013625 PF12833 Helix-turn-helix domain IXO35_013630 PF03989 DNA gyrase C-terminal domain, beta-propeller IXO35_013630 PF00521 DNA gyrase/topoisomerase IV, subunit A IXO35_013635 PF00210 Ferritin-like domain IXO35_013640 PF01804 Penicillin amidase IXO35_013650 PF07715 TonB-dependent Receptor Plug Domain IXO35_013650 PF00593 TonB dependent receptor IXO35_013660 PF13537 Glutamine amidotransferase domain IXO35_013660 PF00733 Asparagine synthase IXO35_013665 PF07687 Peptidase dimerisation domain IXO35_013665 PF01546 Peptidase family M20/M25/M40 IXO35_013675 PF03960 ArsC family IXO35_013685 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal IXO35_013685 PF14602 Hexapeptide repeat of succinyl-transferase IXO35_013685 PF00132 Bacterial transferase hexapeptide (six repeats) IXO35_013690 PF01609 Transposase DDE domain IXO35_013690 PF05598 Transposase domain (DUF772) IXO35_013695 PF08335 GlnD PII-uridylyltransferase IXO35_013695 PF01966 HD domain IXO35_013695 PF01909 Nucleotidyltransferase domain IXO35_013700 PF00557 Metallopeptidase family M24 IXO35_013735 PF00318 Ribosomal protein S2 IXO35_013740 PF00889 Elongation factor TS IXO35_013750 PF00696 Amino acid kinase family IXO35_013755 PF01765 Ribosome recycling factor IXO35_013760 PF01255 Putative undecaprenyl diphosphate synthase IXO35_013770 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain IXO35_013770 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IXO35_013770 PF13288 DXP reductoisomerase C-terminal domain IXO35_013775 PF17820 PDZ domain IXO35_013775 PF02163 Peptidase family M50 IXO35_013780 PF07244 Surface antigen variable number repeat IXO35_013780 PF01103 Surface antigen IXO35_013790 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD IXO35_013790 PF00132 Bacterial transferase hexapeptide (six repeats) IXO35_013795 PF07977 FabA-like domain IXO35_013800 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 IXO35_013800 PF00132 Bacterial transferase hexapeptide (six repeats) IXO35_013805 PF02684 Lipid-A-disaccharide synthetase IXO35_013810 PF01351 Ribonuclease HII IXO35_013815 PF02811 PHP domain IXO35_013815 PF14579 Helix-hairpin-helix motif IXO35_013815 PF01336 OB-fold nucleic acid binding domain IXO35_013815 PF07733 Bacterial DNA polymerase III alpha NTPase domain IXO35_013815 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IXO35_013820 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IXO35_013830 PF07715 TonB-dependent Receptor Plug Domain IXO35_013830 PF00593 TonB dependent receptor IXO35_013835 PF00005 ABC transporter IXO35_013835 PF13732 Domain of unknown function (DUF4162) IXO35_013855 PF03653 Uncharacterised protein family (UPF0093) IXO35_013900 PF00009 Elongation factor Tu GTP binding domain IXO35_013920 PF05598 Transposase domain (DUF772) IXO35_013935 PF02592 Putative vitamin uptake transporter IXO35_013950 PF02574 Homocysteine S-methyltransferase IXO35_013955 PF00324 Amino acid permease IXO35_013975 PF09334 tRNA synthetases class I (M) IXO35_013975 PF01588 Putative tRNA binding domain IXO35_013985 PF04060 Putative Fe-S cluster IXO35_014000 PF04545 Sigma-70, region 4 IXO35_014000 PF04542 Sigma-70 region 2 IXO35_014045 PF01042 Endoribonuclease L-PSP IXO35_014055 PF03706 Lysylphosphatidylglycerol synthase TM region IXO35_014055 PF09924 Uncharacterised conserved protein (DUF2156) IXO35_014085 PF01609 Transposase DDE domain IXO35_014085 PF05598 Transposase domain (DUF772) IXO35_014100 PF07690 Major Facilitator Superfamily IXO35_014105 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IXO35_014115 PF03831 PhnA domain IXO35_014115 PF08274 PhnA Zinc-Ribbon IXO35_014130 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IXO35_014170 PF01609 Transposase DDE domain IXO35_014170 PF05598 Transposase domain (DUF772) IXO35_014175 PF01258 Prokaryotic dksA/traR C4-type zinc finger IXO35_014185 PF07043 Protein of unknown function (DUF1328) IXO35_014190 PF01863 Protein of unknown function DUF45 IXO35_014200 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IXO35_014200 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IXO35_014205 PF03797 Autotransporter beta-domain IXO35_014205 PF12951 Passenger-associated-transport-repeat IXO35_014205 PF00082 Subtilase family IXO35_014210 PF02803 Thiolase, C-terminal domain IXO35_014210 PF00108 Thiolase, N-terminal domain IXO35_014225 PF00990 Diguanylate cyclase, GGDEF domain IXO35_014225 PF00072 Response regulator receiver domain IXO35_014240 PF04679 ATP dependent DNA ligase C terminal region IXO35_014240 PF01068 ATP dependent DNA ligase domain IXO35_014240 PF04675 DNA ligase N terminus IXO35_014250 PF01068 ATP dependent DNA ligase domain IXO35_014250 PF04675 DNA ligase N terminus IXO35_014250 PF04679 ATP dependent DNA ligase C terminal region IXO35_014255 PF08494 DEAD/H associated IXO35_014255 PF00271 Helicase conserved C-terminal domain IXO35_014255 PF00270 DEAD/DEAH box helicase IXO35_014275 PF00313 'Cold-shock' DNA-binding domain IXO35_014280 PF01048 Phosphorylase superfamily IXO35_014285 PF00156 Phosphoribosyl transferase domain IXO35_014290 PF00933 Glycosyl hydrolase family 3 N terminal domain IXO35_014295 PF04244 Deoxyribodipyrimidine photo-lyase-related protein IXO35_014305 PF01323 DSBA-like thioredoxin domain IXO35_014335 PF05598 Transposase domain (DUF772) IXO35_014335 PF01609 Transposase DDE domain IXO35_014345 PF01928 CYTH domain IXO35_014350 PF05958 tRNA (Uracil-5-)-methyltransferase IXO35_014360 PF02565 Recombination protein O C terminal IXO35_014360 PF11967 Recombination protein O N terminal IXO35_014365 PF01926 50S ribosome-binding GTPase IXO35_014365 PF07650 KH domain IXO35_014370 PF00035 Double-stranded RNA binding motif IXO35_014370 PF14622 Ribonuclease-III-like IXO35_014380 PF10502 Signal peptidase, peptidase S26 IXO35_014385 PF00679 Elongation factor G C-terminus IXO35_014385 PF00009 Elongation factor Tu GTP binding domain IXO35_014385 PF03144 Elongation factor Tu domain 2 IXO35_014385 PF06421 GTP-binding protein LepA C-terminus IXO35_014390 PF13180 PDZ domain IXO35_014400 PF04542 Sigma-70 region 2 IXO35_014400 PF08281 Sigma-70, region 4 IXO35_014405 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IXO35_014405 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IXO35_014405 PF00378 Enoyl-CoA hydratase/isomerase IXO35_014410 PF01545 Cation efflux family IXO35_014415 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IXO35_014415 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IXO35_014420 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IXO35_014420 PF00378 Enoyl-CoA hydratase/isomerase IXO35_014420 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IXO35_014425 PF00378 Enoyl-CoA hydratase/isomerase IXO35_014430 PF02770 Acyl-CoA dehydrogenase, middle domain IXO35_014430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IXO35_014430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IXO35_014435 PF00171 Aldehyde dehydrogenase family IXO35_014440 PF01381 Helix-turn-helix IXO35_014440 PF06114 IrrE N-terminal-like domain IXO35_014440 PF09856 Predicted transcriptional regulator (DUF2083) IXO35_014485 PF00672 HAMP domain IXO35_014485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_014485 PF17149 Periplasmic sensor domain found in signal transduction proteins IXO35_014485 PF00512 His Kinase A (phospho-acceptor) domain IXO35_014485 PF01627 Hpt domain IXO35_014485 PF00072 Response regulator receiver domain IXO35_014490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_014490 PF00512 His Kinase A (phospho-acceptor) domain IXO35_014490 PF01627 Hpt domain IXO35_014490 PF00072 Response regulator receiver domain IXO35_014490 PF17149 Periplasmic sensor domain found in signal transduction proteins IXO35_014490 PF00672 HAMP domain IXO35_014495 PF01627 Hpt domain IXO35_014495 PF00512 His Kinase A (phospho-acceptor) domain IXO35_014495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_014495 PF17149 Periplasmic sensor domain found in signal transduction proteins IXO35_014495 PF00072 Response regulator receiver domain IXO35_014495 PF00672 HAMP domain IXO35_014500 PF04264 YceI-like domain IXO35_014510 PF04264 YceI-like domain IXO35_014525 PF03315 Serine dehydratase beta chain IXO35_014525 PF03313 Serine dehydratase alpha chain IXO35_014535 PF01053 Cys/Met metabolism PLP-dependent enzyme IXO35_014540 PF00561 alpha/beta hydrolase fold IXO35_014545 PF01476 LysM domain IXO35_014545 PF08525 Opacity-associated protein A N-terminal motif IXO35_014545 PF01551 Peptidase family M23 IXO35_014550 PF00009 Elongation factor Tu GTP binding domain IXO35_014550 PF16658 Class II release factor RF3, C-terminal domain IXO35_014555 PF03006 Haemolysin-III related IXO35_014575 PF00535 Glycosyl transferase family 2 IXO35_014580 PF00912 Transglycosylase IXO35_014585 PF01430 Hsp33 protein IXO35_014595 PF07715 TonB-dependent Receptor Plug Domain IXO35_014595 PF00593 TonB dependent receptor IXO35_014600 PF00440 Bacterial regulatory proteins, tetR family IXO35_014605 PF00561 alpha/beta hydrolase fold IXO35_014610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IXO35_014610 PF09317 Domain of unknown function (DUF1974) IXO35_014610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IXO35_014640 PF01597 Glycine cleavage H-protein IXO35_014645 PF08669 Glycine cleavage T-protein C-terminal barrel domain IXO35_014645 PF01571 Aminomethyltransferase folate-binding domain IXO35_014655 PF16200 C-terminal region of band_7 IXO35_014655 PF01145 SPFH domain / Band 7 family IXO35_014670 PF03819 MazG nucleotide pyrophosphohydrolase domain IXO35_014675 PF00459 Inositol monophosphatase family IXO35_014680 PF00293 NUDIX domain IXO35_014685 PF00202 Aminotransferase class-III IXO35_014690 PF04452 RNA methyltransferase IXO35_014695 PF02685 Glucokinase IXO35_014710 PF00704 Glycosyl hydrolases family 18 IXO35_014710 PF01476 LysM domain IXO35_014730 PF14310 Fibronectin type III-like domain IXO35_014730 PF00933 Glycosyl hydrolase family 3 N terminal domain IXO35_014730 PF01915 Glycosyl hydrolase family 3 C-terminal domain IXO35_014730 PF07691 PA14 domain IXO35_014735 PF00005 ABC transporter IXO35_014735 PF00664 ABC transporter transmembrane region IXO35_014735 PF03412 Peptidase C39 family IXO35_014770 PF17678 Glycosyl hydrolase family 92 N-terminal domain IXO35_014770 PF07971 Glycosyl hydrolase family 92 IXO35_014780 PF01301 Glycosyl hydrolases family 35 IXO35_014810 PF03932 CutC family IXO35_014815 PF01112 Asparaginase IXO35_014840 PF05598 Transposase domain (DUF772) IXO35_014840 PF01609 Transposase DDE domain IXO35_014845 PF13302 Acetyltransferase (GNAT) domain IXO35_014860 PF02895 Signal transducing histidine kinase, homodimeric domain IXO35_014860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_014860 PF01627 Hpt domain IXO35_014860 PF00072 Response regulator receiver domain IXO35_014860 PF01584 CheW-like domain IXO35_014865 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term IXO35_014865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXO35_014870 PF01584 CheW-like domain IXO35_014875 PF00072 Response regulator receiver domain IXO35_014880 PF00072 Response regulator receiver domain IXO35_014885 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain IXO35_014885 PF02951 Prokaryotic glutathione synthetase, N-terminal domain IXO35_014895 PF03747 ADP-ribosylglycohydrolase IXO35_014900 PF00814 Glycoprotease family IXO35_014905 PF04851 Type III restriction enzyme, res subunit IXO35_014905 PF13307 Helicase C-terminal domain IXO35_014915 PF14814 Bifunctional transglycosylase second domain IXO35_014915 PF00905 Penicillin binding protein transpeptidase domain IXO35_014915 PF00912 Transglycosylase IXO35_014920 PF00535 Glycosyl transferase family 2 IXO35_014930 PF13291 ACT domain IXO35_014930 PF02824 TGS domain IXO35_014930 PF04607 Region found in RelA / SpoT proteins IXO35_014935 PF08042 PqqA family IXO35_014940 PF12706 Beta-lactamase superfamily domain IXO35_014945 PF03070 TENA/THI-4/PQQC family IXO35_014950 PF05402 Coenzyme PQQ synthesis protein D (PqqD) IXO35_014955 PF13186 Iron-sulfur cluster-binding domain IXO35_014955 PF04055 Radical SAM superfamily IXO35_014980 PF11898 Domain of unknown function (DUF3418) IXO35_014980 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold IXO35_014980 PF00271 Helicase conserved C-terminal domain IXO35_014980 PF04408 Helicase associated domain (HA2) IXO35_014980 PF00270 DEAD/DEAH box helicase IXO35_014985 PF00210 Ferritin-like domain IXO35_014990 PF00570 HRDC domain IXO35_014990 PF16124 RecQ zinc-binding IXO35_014990 PF09382 RQC domain IXO35_014990 PF00270 DEAD/DEAH box helicase IXO35_014990 PF00271 Helicase conserved C-terminal domain IXO35_015015 PF06508 Queuosine biosynthesis protein QueC IXO35_015025 PF05598 Transposase domain (DUF772) IXO35_015050 PF01810 LysE type translocator IXO35_015065 PF00849 RNA pseudouridylate synthase IXO35_015065 PF01479 S4 domain IXO35_015075 PF04055 Radical SAM superfamily IXO35_015085 PF00691 OmpA family IXO35_015090 PF07676 WD40-like Beta Propeller Repeat IXO35_015090 PF04052 TolB amino-terminal domain IXO35_015100 PF02472 Biopolymer transport protein ExbD/TolR IXO35_015105 PF01618 MotA/TolQ/ExbB proton channel family IXO35_015110 PF03061 Thioesterase superfamily IXO35_015115 PF17864 RuvB AAA lid domain IXO35_015115 PF05491 RuvB C-terminal winged helix domain IXO35_015115 PF05496 Holliday junction DNA helicase RuvB P-loop domain IXO35_015120 PF02705 K+ potassium transporter IXO35_015125 PF07499 RuvA, C-terminal domain IXO35_015125 PF01330 RuvA N terminal domain IXO35_015130 PF02075 Crossover junction endodeoxyribonuclease RuvC IXO35_015135 PF01709 Transcriptional regulator IXO35_015150 PF02938 GAD domain IXO35_015150 PF01336 OB-fold nucleic acid binding domain IXO35_015150 PF00152 tRNA synthetases class II (D, K and N) IXO35_015185 PF18073 Rubredoxin metal binding domain IXO35_015255 PF05593 RHS Repeat IXO35_015255 PF03527 RHS protein IXO35_015275 PF03527 RHS protein IXO35_015275 PF14220 Domain of unknown function (DUF4329) IXO35_015275 PF05593 RHS Repeat IXO35_015275 PF14220 Domain of unknown function (DUF4329) IXO35_015275 PF03527 RHS protein IXO35_015275 PF05593 RHS Repeat IXO35_015285 PF04717 Type VI secretion system, phage-baseplate injector IXO35_015285 PF06715 Gp5 C-terminal repeat (3 copies) IXO35_015295 PF03626 Prokaryotic Cytochrome C oxidase subunit IV IXO35_015300 PF00510 Cytochrome c oxidase subunit III IXO35_015305 PF00115 Cytochrome C and Quinol oxidase polypeptide I IXO35_015310 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IXO35_015310 PF06481 COX Aromatic Rich Motif IXO35_015320 PF02401 LytB protein IXO35_015325 PF01252 Signal peptidase (SPase) II IXO35_015330 PF06827 Zinc finger found in FPG and IleRS IXO35_015330 PF08264 Anticodon-binding domain of tRNA IXO35_015330 PF00133 tRNA synthetases class I (I, L, M and V) IXO35_015335 PF06574 FAD synthetase IXO35_015335 PF01687 Riboflavin kinase IXO35_015340 PF03023 Lipid II flippase MurJ IXO35_015345 PF01649 Ribosomal protein S20 IXO35_015350 PF01018 GTP1/OBG IXO35_015350 PF01926 50S ribosome-binding GTPase IXO35_015355 PF01016 Ribosomal L27 protein IXO35_015360 PF00829 Ribosomal prokaryotic L21 protein IXO35_015365 PF17755 UvrA DNA-binding domain IXO35_015365 PF00005 ABC transporter IXO35_015365 PF17760 UvrA interaction domain IXO35_015380 PF00378 Enoyl-CoA hydratase/isomerase IXO35_015395 PF04542 Sigma-70 region 2 IXO35_015395 PF08281 Sigma-70, region 4 IXO35_015410 PF04377 Arginine-tRNA-protein transferase, C terminus IXO35_015410 PF04376 Arginine-tRNA-protein transferase, N terminus IXO35_015440 PF07715 TonB-dependent Receptor Plug Domain IXO35_015440 PF00593 TonB dependent receptor IXO35_015450 PF02358 Trehalose-phosphatase IXO35_015455 PF00723 Glycosyl hydrolases family 15 IXO35_015460 PF00982 Glycosyltransferase family 20 IXO35_015475 PF02578 Multi-copper polyphenol oxidoreductase laccase IXO35_015480 PF00849 RNA pseudouridylate synthase IXO35_015485 PF13525 Outer membrane lipoprotein IXO35_015490 PF00795 Carbon-nitrogen hydrolase IXO35_015490 PF02540 NAD synthase IXO35_015500 PF02629 CoA binding domain IXO35_015500 PF00549 CoA-ligase IXO35_015505 PF08442 ATP-grasp domain IXO35_015505 PF00549 CoA-ligase IXO35_015510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_015510 PF00512 His Kinase A (phospho-acceptor) domain IXO35_015515 PF00158 Sigma-54 interaction domain IXO35_015515 PF02954 Bacterial regulatory protein, Fis family IXO35_015515 PF00072 Response regulator receiver domain IXO35_015530 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IXO35_015530 PF00437 Type II/IV secretion system protein IXO35_015545 PF08019 Phosphoethanolamine transferase EptA/EptB IXO35_015545 PF00884 Sulfatase IXO35_015550 PF00114 Pilin (bacterial filament) IXO35_015550 PF07963 Prokaryotic N-terminal methylation motif IXO35_015555 PF00482 Type II secretion system (T2SS), protein F IXO35_015560 PF06750 Bacterial Peptidase A24 N-terminal domain IXO35_015560 PF01478 Type IV leader peptidase family IXO35_015565 PF01121 Dephospho-CoA kinase IXO35_015580 PF05598 Transposase domain (DUF772) IXO35_015580 PF01609 Transposase DDE domain IXO35_015630 PF00664 ABC transporter transmembrane region IXO35_015630 PF00005 ABC transporter IXO35_015640 PF00873 AcrB/AcrD/AcrF family IXO35_015655 PF02321 Outer membrane efflux protein IXO35_015660 PF00072 Response regulator receiver domain IXO35_015660 PF00486 Transcriptional regulatory protein, C terminal IXO35_015665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_015665 PF00672 HAMP domain IXO35_015665 PF00512 His Kinase A (phospho-acceptor) domain IXO35_015670 PF00999 Sodium/hydrogen exchanger family IXO35_015675 PF00144 Beta-lactamase IXO35_015680 PF03737 Aldolase/RraA IXO35_015700 PF01479 S4 domain IXO35_015700 PF00849 RNA pseudouridylate synthase IXO35_015705 PF00563 EAL domain IXO35_015705 PF00990 Diguanylate cyclase, GGDEF domain IXO35_015705 PF08448 PAS fold IXO35_015710 PF03880 DbpA RNA binding domain IXO35_015710 PF00270 DEAD/DEAH box helicase IXO35_015710 PF00271 Helicase conserved C-terminal domain IXO35_015755 PF02805 Metal binding domain of Ada IXO35_015755 PF06029 AlkA N-terminal domain IXO35_015755 PF00730 HhH-GPD superfamily base excision DNA repair protein IXO35_015755 PF12833 Helix-turn-helix domain IXO35_015760 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IXO35_015760 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IXO35_015770 PF00654 Voltage gated chloride channel IXO35_015775 PF00107 Zinc-binding dehydrogenase IXO35_015775 PF08240 Alcohol dehydrogenase GroES-like domain IXO35_015810 PF05736 OprF membrane domain IXO35_015810 PF00691 OmpA family IXO35_015820 PF03441 FAD binding domain of DNA photolyase IXO35_015820 PF00875 DNA photolyase IXO35_015825 PF03796 DnaB-like helicase C terminal domain IXO35_015825 PF00772 DnaB-like helicase N terminal domain IXO35_015830 PF03358 NADPH-dependent FMN reductase IXO35_015835 PF00733 Asparagine synthase IXO35_015835 PF13537 Glutamine amidotransferase domain IXO35_015840 PF13417 Glutathione S-transferase, N-terminal domain IXO35_015850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IXO35_015850 PF02770 Acyl-CoA dehydrogenase, middle domain IXO35_015850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IXO35_015865 PF01026 TatD related DNase IXO35_015870 PF00899 ThiF family IXO35_015885 PF00313 'Cold-shock' DNA-binding domain IXO35_015930 PF01475 Ferric uptake regulator family IXO35_015935 PF00749 tRNA synthetases class I (E and Q), catalytic domain IXO35_015945 PF00795 Carbon-nitrogen hydrolase IXO35_015955 PF01609 Transposase DDE domain IXO35_015955 PF05598 Transposase domain (DUF772) IXO35_015965 PF05598 Transposase domain (DUF772) IXO35_015965 PF01609 Transposase DDE domain IXO35_015975 PF05598 Transposase domain (DUF772) IXO35_015975 PF01609 Transposase DDE domain IXO35_016025 PF00512 His Kinase A (phospho-acceptor) domain IXO35_016025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_016025 PF00672 HAMP domain IXO35_016040 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ IXO35_016050 PF00271 Helicase conserved C-terminal domain IXO35_016050 PF00270 DEAD/DEAH box helicase IXO35_016050 PF02559 CarD-like/TRCF domain IXO35_016050 PF03461 TRCF domain IXO35_016050 PF17757 UvrB interaction domain IXO35_016065 PF01584 CheW-like domain IXO35_016065 PF09078 CheY binding IXO35_016065 PF02895 Signal transducing histidine kinase, homodimeric domain IXO35_016065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_016065 PF01627 Hpt domain IXO35_016070 PF02203 Tar ligand binding domain homologue IXO35_016070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXO35_016070 PF00672 HAMP domain IXO35_016075 PF01584 CheW-like domain IXO35_016080 PF00563 EAL domain IXO35_016080 PF13426 PAS domain IXO35_016080 PF00990 Diguanylate cyclase, GGDEF domain IXO35_016085 PF01739 CheR methyltransferase, SAM binding domain IXO35_016085 PF03705 CheR methyltransferase, all-alpha domain IXO35_016090 PF01339 CheB methylesterase IXO35_016090 PF00072 Response regulator receiver domain IXO35_016100 PF01431 Peptidase family M13 IXO35_016100 PF05649 Peptidase family M13 IXO35_016115 PF00300 Histidine phosphatase superfamily (branch 1) IXO35_016120 PF04493 Endonuclease V IXO35_016130 PF02678 Pirin IXO35_016130 PF05726 Pirin C-terminal cupin domain IXO35_016165 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IXO35_016165 PF04717 Type VI secretion system, phage-baseplate injector IXO35_016165 PF13296 Putative type VI secretion system Rhs element Vgr IXO35_016185 PF04717 Type VI secretion system, phage-baseplate injector IXO35_016195 PF02678 Pirin IXO35_016195 PF05726 Pirin C-terminal cupin domain IXO35_016200 PF02554 Carbon starvation protein CstA IXO35_016200 PF13722 5TM C-terminal transporter carbon starvation CstA IXO35_016205 PF04328 Selenoprotein, putative IXO35_016245 PF01590 GAF domain IXO35_016245 PF00563 EAL domain IXO35_016245 PF00990 Diguanylate cyclase, GGDEF domain IXO35_016245 PF00360 Phytochrome region IXO35_016250 PF00436 Single-strand binding protein family IXO35_016255 PF00348 Polyprenyl synthetase IXO35_016265 PF08245 Mur ligase middle domain IXO35_016280 PF00696 Amino acid kinase family IXO35_016280 PF01842 ACT domain IXO35_016290 PF02567 Phenazine biosynthesis-like protein IXO35_016300 PF02566 OsmC-like protein IXO35_016310 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IXO35_016310 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IXO35_016315 PF03652 Holliday junction resolvase IXO35_016320 PF02622 Uncharacterized ACR, COG1678 IXO35_016330 PF13673 Acetyltransferase (GNAT) domain IXO35_016330 PF13302 Acetyltransferase (GNAT) domain IXO35_016330 PF03352 Methyladenine glycosylase IXO35_016330 PF00117 Glutamine amidotransferase class-I IXO35_016330 PF00958 GMP synthase C terminal domain IXO35_016350 PF00437 Type II/IV secretion system protein IXO35_016355 PF00437 Type II/IV secretion system protein IXO35_016360 PF01168 Alanine racemase, N-terminal domain IXO35_016365 PF03807 NADP oxidoreductase coenzyme F420-dependent IXO35_016365 PF14748 Pyrroline-5-carboxylate reductase dimerisation IXO35_016405 PF01965 DJ-1/PfpI family IXO35_016425 PF02082 Transcriptional regulator IXO35_016430 PF01458 Uncharacterized protein family (UPF0051) IXO35_016435 PF00005 ABC transporter IXO35_016440 PF01458 Uncharacterized protein family (UPF0051) IXO35_016445 PF00266 Aminotransferase class-V IXO35_016455 PF00355 Rieske [2Fe-2S] domain IXO35_016480 PF00266 Aminotransferase class-V IXO35_016485 PF01053 Cys/Met metabolism PLP-dependent enzyme IXO35_016495 PF07722 Peptidase C26 IXO35_016500 PF01810 LysE type translocator IXO35_016505 PF04204 Homoserine O-succinyltransferase IXO35_016510 PF00120 Glutamine synthetase, catalytic domain IXO35_016515 PF00872 Transposase, Mutator family IXO35_016540 PF00183 Hsp90 protein IXO35_016540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_016545 PF12833 Helix-turn-helix domain IXO35_016570 PF07859 alpha/beta hydrolase fold IXO35_016570 PF13472 GDSL-like Lipase/Acylhydrolase family IXO35_016580 PF03466 LysR substrate binding domain IXO35_016580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO35_016595 PF00005 ABC transporter IXO35_016595 PF12848 ABC transporter IXO35_016600 PF07715 TonB-dependent Receptor Plug Domain IXO35_016600 PF00593 TonB dependent receptor IXO35_016615 PF07715 TonB-dependent Receptor Plug Domain IXO35_016615 PF00593 TonB dependent receptor IXO35_016620 PF07715 TonB-dependent Receptor Plug Domain IXO35_016620 PF00593 TonB dependent receptor IXO35_016630 PF00999 Sodium/hydrogen exchanger family IXO35_016630 PF02254 TrkA-N domain IXO35_016645 PF07715 TonB-dependent Receptor Plug Domain IXO35_016645 PF07660 Secretin and TonB N terminus short domain IXO35_016645 PF00593 TonB dependent receptor IXO35_016655 PF04183 IucA / IucC family IXO35_016655 PF06276 Ferric iron reductase FhuF-like transporter IXO35_016660 PF07690 Major Facilitator Superfamily IXO35_016665 PF06276 Ferric iron reductase FhuF-like transporter IXO35_016665 PF04183 IucA / IucC family IXO35_016670 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IXO35_016670 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IXO35_016680 PF02654 Cobalamin-5-phosphate synthase IXO35_016690 PF02277 Phosphoribosyltransferase IXO35_016695 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase IXO35_016705 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP IXO35_016705 PF12557 Cob(I)alamin adenosyltransferase N terminal IXO35_016730 PF07715 TonB-dependent Receptor Plug Domain IXO35_016730 PF00593 TonB dependent receptor IXO35_016765 PF00004 ATPase family associated with various cellular activities (AAA) IXO35_016765 PF07724 AAA domain (Cdc48 subfamily) IXO35_016765 PF17871 AAA lid domain IXO35_016765 PF02861 Clp amino terminal domain, pathogenicity island component IXO35_016765 PF10431 C-terminal, D2-small domain, of ClpB protein IXO35_016770 PF01541 GIY-YIG catalytic domain IXO35_016805 PF01479 S4 domain IXO35_016810 PF01554 MatE IXO35_016820 PF01245 Ribosomal protein L19 IXO35_016825 PF01746 tRNA (Guanine-1)-methyltransferase IXO35_016830 PF05239 PRC-barrel domain IXO35_016830 PF01782 RimM N-terminal domain IXO35_016835 PF00886 Ribosomal protein S16 IXO35_016845 PF03060 Nitronate monooxygenase IXO35_016860 PF00448 SRP54-type protein, GTPase domain IXO35_016860 PF02881 SRP54-type protein, helical bundle domain IXO35_016860 PF02978 Signal peptide binding domain IXO35_016870 PF01578 Cytochrome C assembly protein IXO35_016875 PF01263 Aldose 1-epimerase IXO35_016880 PF06964 Alpha-L-arabinofuranosidase C-terminal domain IXO35_016925 PF01546 Peptidase family M20/M25/M40 IXO35_016925 PF07687 Peptidase dimerisation domain IXO35_016940 PF01636 Phosphotransferase enzyme family IXO35_016945 PF00483 Nucleotidyl transferase IXO35_016950 PF00308 Bacterial dnaA protein IXO35_016955 PF01594 AI-2E family transporter IXO35_016965 PF00586 AIR synthase related protein, N-terminal domain IXO35_016965 PF02769 AIR synthase related protein, C-terminal domain IXO35_016980 PF00551 Formyl transferase IXO35_017005 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IXO35_017015 PF01722 BolA-like protein IXO35_017020 PF00571 CBS domain IXO35_017020 PF01380 SIS domain IXO35_017035 PF03968 OstA-like protein IXO35_017040 PF00005 ABC transporter IXO35_017045 PF00309 Sigma-54 factor, Activator interacting domain (AID) IXO35_017045 PF04963 Sigma-54 factor, core binding domain IXO35_017045 PF04552 Sigma-54, DNA binding domain IXO35_017050 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IXO35_017055 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IXO35_017060 PF07475 HPr Serine kinase C-terminal domain IXO35_017060 PF02603 HPr Serine kinase N terminus IXO35_017065 PF03668 P-loop ATPase protein family IXO35_017075 PF00381 PTS HPr component phosphorylation site IXO35_017080 PF05524 PEP-utilising enzyme, N-terminal IXO35_017080 PF00391 PEP-utilising enzyme, mobile domain IXO35_017080 PF02896 PEP-utilising enzyme, TIM barrel domain IXO35_017085 PF00571 CBS domain IXO35_017085 PF01769 Divalent cation transporter IXO35_017085 PF03448 MgtE intracellular N domain IXO35_017090 PF00756 Putative esterase IXO35_017095 PF02322 Cytochrome bd terminal oxidase subunit II IXO35_017100 PF01654 Cytochrome bd terminal oxidase subunit I IXO35_017120 PF00324 Amino acid permease IXO35_017130 PF00561 alpha/beta hydrolase fold IXO35_017135 PF00196 Bacterial regulatory proteins, luxR family IXO35_017140 PF00324 Amino acid permease IXO35_017155 PF12706 Beta-lactamase superfamily domain IXO35_017160 PF04820 Tryptophan halogenase IXO35_017185 PF09278 MerR, DNA binding IXO35_017185 PF00376 MerR family regulatory protein IXO35_017200 PF03738 Glutathionylspermidine synthase preATP-grasp IXO35_017225 PF04012 PspA/IM30 family IXO35_017235 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IXO35_017235 PF01243 Pyridoxamine 5'-phosphate oxidase IXO35_017240 PF01202 Shikimate kinase IXO35_017245 PF01761 3-dehydroquinate synthase IXO35_017255 PF01208 Uroporphyrinogen decarboxylase (URO-D) IXO35_017270 PF03377 TAL effector repeat IXO35_017285 PF03377 TAL effector repeat IXO35_017300 PF03377 TAL effector repeat IXO35_017315 PF03377 TAL effector repeat IXO35_017340 PF00202 Aminotransferase class-III IXO35_017350 PF00127 Copper binding proteins, plastocyanin/azurin family IXO35_017365 PF00034 Cytochrome c IXO35_017365 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IXO35_017385 PF00202 Aminotransferase class-III IXO35_017390 PF00027 Cyclic nucleotide-binding domain IXO35_017390 PF00520 Ion transport protein IXO35_017415 PF05598 Transposase domain (DUF772) IXO35_017415 PF01609 Transposase DDE domain IXO35_017420 PF18030 RimK PreATP-grasp domain IXO35_017420 PF08443 RimK-like ATP-grasp domain IXO35_017430 PF00072 Response regulator receiver domain IXO35_017430 PF00486 Transcriptional regulatory protein, C terminal IXO35_017435 PF00512 His Kinase A (phospho-acceptor) domain IXO35_017435 PF00672 HAMP domain IXO35_017435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_017455 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IXO35_017455 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IXO35_017485 PF00753 Metallo-beta-lactamase superfamily IXO35_017485 PF04273 Putative phosphatase (DUF442) IXO35_017495 PF00528 Binding-protein-dependent transport system inner membrane component IXO35_017500 PF00005 ABC transporter IXO35_017500 PF03459 TOBE domain IXO35_017520 PF08521 Two-component sensor kinase N-terminal IXO35_017520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_017520 PF00512 His Kinase A (phospho-acceptor) domain IXO35_017525 PF00486 Transcriptional regulatory protein, C terminal IXO35_017525 PF00072 Response regulator receiver domain IXO35_017545 PF00501 AMP-binding enzyme IXO35_017570 PF03734 L,D-transpeptidase catalytic domain IXO35_017570 PF01476 LysM domain IXO35_017575 PF04225 Opacity-associated protein A LysM-like domain IXO35_017575 PF01551 Peptidase family M23 IXO35_017585 PF02779 Transketolase, pyrimidine binding domain IXO35_017585 PF00456 Transketolase, thiamine diphosphate binding domain IXO35_017585 PF02780 Transketolase, C-terminal domain IXO35_017590 PF00375 Sodium:dicarboxylate symporter family IXO35_017610 PF07584 Aerotolerance regulator N-terminal IXO35_017610 PF00092 von Willebrand factor type A domain IXO35_017630 PF07726 ATPase family associated with various cellular activities (AAA) IXO35_017630 PF17863 AAA lid domain IXO35_017650 PF11741 AMIN domain IXO35_017650 PF07660 Secretin and TonB N terminus short domain IXO35_017650 PF00263 Bacterial type II and III secretion system protein IXO35_017650 PF03958 Bacterial type II/III secretion system short domain IXO35_017655 PF04351 Pilus assembly protein, PilP IXO35_017660 PF04350 Pilus assembly protein, PilO IXO35_017665 PF05137 Fimbrial assembly protein (PilN) IXO35_017670 PF11104 Type IV pilus assembly protein PilM; IXO35_017675 PF00912 Transglycosylase IXO35_017675 PF17092 Penicillin-binding protein OB-like domain IXO35_017675 PF00905 Penicillin binding protein transpeptidase domain IXO35_017685 PF00285 Citrate synthase, C-terminal domain IXO35_017690 PF01197 Ribosomal protein L31 IXO35_017695 PF01156 Inosine-uridine preferring nucleoside hydrolase IXO35_017700 PF00270 DEAD/DEAH box helicase IXO35_017700 PF00271 Helicase conserved C-terminal domain IXO35_017700 PF17191 RecG wedge domain IXO35_017705 PF01042 Endoribonuclease L-PSP IXO35_017710 PF13291 ACT domain IXO35_017710 PF02824 TGS domain IXO35_017710 PF04607 Region found in RelA / SpoT proteins IXO35_017715 PF01192 RNA polymerase Rpb6 IXO35_017730 PF00625 Guanylate kinase IXO35_017735 PF08340 Domain of unknown function (DUF1732) IXO35_017735 PF03755 YicC-like family, N-terminal region IXO35_017740 PF01138 3' exoribonuclease family, domain 1 IXO35_017740 PF03725 3' exoribonuclease family, domain 2 IXO35_017750 PF01725 Ham1 family IXO35_017755 PF06969 HemN C-terminal domain IXO35_017755 PF04055 Radical SAM superfamily IXO35_017770 PF00557 Metallopeptidase family M24 IXO35_017785 PF05195 Aminopeptidase P, N-terminal domain IXO35_017785 PF00557 Metallopeptidase family M24 IXO35_017790 PF03695 Uncharacterised protein family (UPF0149) IXO35_017800 PF05164 Cell division protein ZapA IXO35_017810 PF01812 5-formyltetrahydrofolate cyclo-ligase family IXO35_017820 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IXO35_017830 PF13369 Transglutaminase-like superfamily IXO35_017835 PF00301 Rubredoxin IXO35_017840 PF02581 Thiamine monophosphate synthase IXO35_017910 PF00390 Malic enzyme, N-terminal domain IXO35_017910 PF03949 Malic enzyme, NAD binding domain IXO35_017910 PF01515 Phosphate acetyl/butaryl transferase IXO35_017915 PF00375 Sodium:dicarboxylate symporter family IXO35_017930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_017930 PF00512 His Kinase A (phospho-acceptor) domain IXO35_017935 PF07690 Major Facilitator Superfamily IXO35_017945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO35_017945 PF03466 LysR substrate binding domain IXO35_017960 PF00072 Response regulator receiver domain IXO35_017960 PF00196 Bacterial regulatory proteins, luxR family IXO35_017970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_017970 PF08521 Two-component sensor kinase N-terminal IXO35_017970 PF00512 His Kinase A (phospho-acceptor) domain IXO35_017975 PF00072 Response regulator receiver domain IXO35_017975 PF00486 Transcriptional regulatory protein, C terminal IXO35_017985 PF03600 Citrate transporter IXO35_017990 PF00106 short chain dehydrogenase IXO35_017995 PF00356 Bacterial regulatory proteins, lacI family IXO35_018015 PF00128 Alpha amylase, catalytic domain IXO35_018030 PF03193 RsgA GTPase IXO35_018035 PF00155 Aminotransferase class I and II IXO35_018055 PF01522 Polysaccharide deacetylase IXO35_018060 PF00462 Glutaredoxin IXO35_018085 PF05598 Transposase domain (DUF772) IXO35_018085 PF01609 Transposase DDE domain IXO35_018090 PF05598 Transposase domain (DUF772) IXO35_018090 PF01609 Transposase DDE domain IXO35_018135 PF01327 Polypeptide deformylase IXO35_018140 PF03960 ArsC family IXO35_018155 PF07726 ATPase family associated with various cellular activities (AAA) IXO35_018155 PF17863 AAA lid domain IXO35_018165 PF11992 Domain of unknown function (DUF3488) IXO35_018165 PF01841 Transglutaminase-like superfamily IXO35_018165 PF13559 Domain of unknown function (DUF4129) IXO35_018175 PF01230 HIT domain IXO35_018180 PF02132 RecR protein IXO35_018180 PF13662 Toprim domain IXO35_018185 PF02575 YbaB/EbfC DNA-binding family IXO35_018190 PF12169 DNA polymerase III subunits gamma and tau domain III IXO35_018190 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding IXO35_018190 PF12170 DNA polymerase III tau subunit V interacting with alpha IXO35_018205 PF02391 MoaE protein IXO35_018210 PF02597 ThiS family IXO35_018215 PF01967 MoaC family IXO35_018225 PF06463 Molybdenum Cofactor Synthesis C IXO35_018225 PF04055 Radical SAM superfamily IXO35_018230 PF00753 Metallo-beta-lactamase superfamily IXO35_018230 PF12706 Beta-lactamase superfamily domain IXO35_018240 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IXO35_018250 PF13356 Arm DNA-binding domain IXO35_018250 PF00589 Phage integrase family IXO35_018280 PF13296 Putative type VI secretion system Rhs element Vgr IXO35_018280 PF04717 Type VI secretion system, phage-baseplate injector IXO35_018280 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IXO35_018315 PF00929 Exonuclease IXO35_018320 PF00075 RNase H IXO35_018330 PF16123 Hydroxyacylglutathione hydrolase C-terminus IXO35_018330 PF00753 Metallo-beta-lactamase superfamily IXO35_018335 PF05257 CHAP domain IXO35_018335 PF01476 LysM domain IXO35_018360 PF00216 Bacterial DNA-binding protein IXO35_018365 PF00004 ATPase family associated with various cellular activities (AAA) IXO35_018365 PF02190 ATP-dependent protease La (LON) substrate-binding domain IXO35_018365 PF05362 Lon protease (S16) C-terminal proteolytic domain IXO35_018370 PF06689 ClpX C4-type zinc finger IXO35_018370 PF10431 C-terminal, D2-small domain, of ClpB protein IXO35_018370 PF07724 AAA domain (Cdc48 subfamily) IXO35_018375 PF00574 Clp protease IXO35_018380 PF05697 Bacterial trigger factor protein (TF) IXO35_018380 PF05698 Bacterial trigger factor protein (TF) C-terminus IXO35_018430 PF18324 Hypothetical protein TT1725 IXO35_018430 PF00180 Isocitrate/isopropylmalate dehydrogenase IXO35_018450 PF00462 Glutaredoxin IXO35_018455 PF13181 Tetratricopeptide repeat IXO35_018455 PF01435 Peptidase family M48 IXO35_018460 PF00072 Response regulator receiver domain IXO35_018460 PF00486 Transcriptional regulatory protein, C terminal IXO35_018465 PF11808 Phosphate regulon sensor protein PhoR IXO35_018465 PF00989 PAS fold IXO35_018465 PF00512 His Kinase A (phospho-acceptor) domain IXO35_018465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_018470 PF02503 Polyphosphate kinase middle domain IXO35_018470 PF17941 Polyphosphate kinase C-terminal domain 1 IXO35_018470 PF13089 Polyphosphate kinase N-terminal domain IXO35_018470 PF13090 Polyphosphate kinase C-terminal domain 2 IXO35_018475 PF02541 Ppx/GppA phosphatase family IXO35_018480 PF13439 Glycosyltransferase Family 4 IXO35_018480 PF00534 Glycosyl transferases group 1 IXO35_018485 PF01569 PAP2 superfamily IXO35_018490 PF00149 Calcineurin-like phosphoesterase IXO35_018510 PF04305 Protein of unknown function (DUF455) IXO35_018515 PF00156 Phosphoribosyl transferase domain IXO35_018530 PF08245 Mur ligase middle domain IXO35_018530 PF02875 Mur ligase family, glutamate ligase domain IXO35_018540 PF00300 Histidine phosphatase superfamily (branch 1) IXO35_018545 PF10459 Peptidase S46 IXO35_018560 PF08240 Alcohol dehydrogenase GroES-like domain IXO35_018560 PF00107 Zinc-binding dehydrogenase IXO35_018570 PF00005 ABC transporter IXO35_018570 PF17850 CysA C-terminal regulatory domain IXO35_018570 PF12857 TOBE-like domain IXO35_018575 PF00528 Binding-protein-dependent transport system inner membrane component IXO35_018580 PF00528 Binding-protein-dependent transport system inner membrane component IXO35_018590 PF00155 Aminotransferase class I and II IXO35_018600 PF00849 RNA pseudouridylate synthase IXO35_018610 PF00691 OmpA family IXO35_018610 PF05736 OprF membrane domain IXO35_018615 PF08240 Alcohol dehydrogenase GroES-like domain IXO35_018615 PF00107 Zinc-binding dehydrogenase IXO35_018620 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IXO35_018620 PF07992 Pyridine nucleotide-disulphide oxidoreductase IXO35_018660 PF00072 Response regulator receiver domain IXO35_018660 PF01627 Hpt domain IXO35_018660 PF00512 His Kinase A (phospho-acceptor) domain IXO35_018660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_018660 PF00672 HAMP domain IXO35_018660 PF17149 Periplasmic sensor domain found in signal transduction proteins IXO35_018665 PF00990 Diguanylate cyclase, GGDEF domain IXO35_018665 PF00072 Response regulator receiver domain IXO35_018680 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain IXO35_018680 PF00749 tRNA synthetases class I (E and Q), catalytic domain IXO35_018705 PF00892 EamA-like transporter family IXO35_018725 PF01728 FtsJ-like methyltransferase IXO35_018725 PF18125 RlmM ferredoxin-like domain IXO35_018730 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IXO35_018730 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IXO35_018735 PF08450 SMP-30/Gluconolactonase/LRE-like region IXO35_018755 PF00378 Enoyl-CoA hydratase/isomerase IXO35_018760 PF00171 Aldehyde dehydrogenase family IXO35_018765 PF00501 AMP-binding enzyme IXO35_018765 PF13193 AMP-binding enzyme C-terminal domain IXO35_018770 PF03466 LysR substrate binding domain IXO35_018770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO35_018780 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IXO35_018810 PF01494 FAD binding domain IXO35_018815 PF01494 FAD binding domain IXO35_018825 PF01923 Cobalamin adenosyltransferase IXO35_018830 PF00850 Histone deacetylase domain IXO35_018835 PF04453 LPS transport system D IXO35_018835 PF03968 OstA-like protein IXO35_018840 PF00639 PPIC-type PPIASE domain IXO35_018840 PF09312 SurA N-terminal domain IXO35_018845 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IXO35_018855 PF00398 Ribosomal RNA adenine dimethylase IXO35_018860 PF04379 ApaG domain IXO35_018865 PF00149 Calcineurin-like phosphoesterase IXO35_018870 PF00186 Dihydrofolate reductase IXO35_018880 PF00303 Thymidylate synthase IXO35_018885 PF01790 Prolipoprotein diacylglyceryl transferase IXO35_018905 PF01219 Prokaryotic diacylglycerol kinase IXO35_018925 PF08521 Two-component sensor kinase N-terminal IXO35_018925 PF00512 His Kinase A (phospho-acceptor) domain IXO35_018925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_018930 PF00486 Transcriptional regulatory protein, C terminal IXO35_018930 PF00072 Response regulator receiver domain IXO35_018935 PF13472 GDSL-like Lipase/Acylhydrolase family IXO35_018940 PF00005 ABC transporter IXO35_018955 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IXO35_019010 PF00248 Aldo/keto reductase family IXO35_019020 PF07670 Nucleoside recognition IXO35_019020 PF07662 Na+ dependent nucleoside transporter C-terminus IXO35_019020 PF01773 Na+ dependent nucleoside transporter N-terminus IXO35_019025 PF00294 pfkB family carbohydrate kinase IXO35_019035 PF01207 Dihydrouridine synthase (Dus) IXO35_019050 PF02773 S-adenosylmethionine synthetase, C-terminal domain IXO35_019050 PF00438 S-adenosylmethionine synthetase, N-terminal domain IXO35_019050 PF02772 S-adenosylmethionine synthetase, central domain IXO35_019055 PF00328 Histidine phosphatase superfamily (branch 2) IXO35_019095 PF00311 Phosphoenolpyruvate carboxylase IXO35_019105 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IXO35_019105 PF05221 S-adenosyl-L-homocysteine hydrolase IXO35_019110 PF13649 Methyltransferase domain IXO35_019145 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IXO35_019160 PF02801 Beta-ketoacyl synthase, C-terminal domain IXO35_019160 PF00698 Acyl transferase domain IXO35_019160 PF08240 Alcohol dehydrogenase GroES-like domain IXO35_019160 PF00107 Zinc-binding dehydrogenase IXO35_019160 PF16197 Ketoacyl-synthetase C-terminal extension IXO35_019160 PF00109 Beta-ketoacyl synthase, N-terminal domain IXO35_019160 PF08659 KR domain IXO35_019160 PF00550 Phosphopantetheine attachment site IXO35_019160 PF14765 Polyketide synthase dehydratase IXO35_019170 PF02219 Methylenetetrahydrofolate reductase IXO35_019185 PF00293 NUDIX domain IXO35_019195 PF02810 SEC-C motif IXO35_019195 PF07517 SecA DEAD-like domain IXO35_019195 PF01043 SecA preprotein cross-linking domain IXO35_019195 PF07516 SecA Wing and Scaffold domain IXO35_019200 PF01551 Peptidase family M23 IXO35_019200 PF01476 LysM domain IXO35_019210 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase IXO35_019215 PF00091 Tubulin/FtsZ family, GTPase domain IXO35_019215 PF12327 FtsZ family, C-terminal domain IXO35_019220 PF02491 SHS2 domain inserted in FTSA IXO35_019225 PF08478 POTRA domain, FtsQ-type IXO35_019225 PF03799 Cell division protein FtsQ IXO35_019230 PF01820 D-ala D-ala ligase N-terminus IXO35_019230 PF07478 D-ala D-ala ligase C-terminus IXO35_019235 PF01225 Mur ligase family, catalytic domain IXO35_019235 PF02875 Mur ligase family, glutamate ligase domain IXO35_019235 PF08245 Mur ligase middle domain IXO35_019240 PF04101 Glycosyltransferase family 28 C-terminal domain IXO35_019240 PF03033 Glycosyltransferase family 28 N-terminal domain IXO35_019245 PF01098 Cell cycle protein IXO35_019250 PF00953 Glycosyl transferase family 4 IXO35_019255 PF02875 Mur ligase family, glutamate ligase domain IXO35_019255 PF08245 Mur ligase middle domain IXO35_019255 PF01225 Mur ligase family, catalytic domain IXO35_019260 PF01225 Mur ligase family, catalytic domain IXO35_019260 PF02875 Mur ligase family, glutamate ligase domain IXO35_019260 PF08245 Mur ligase middle domain IXO35_019265 PF03717 Penicillin-binding Protein dimerisation domain IXO35_019265 PF00905 Penicillin binding protein transpeptidase domain IXO35_019270 PF04999 Cell division protein FtsL IXO35_019275 PF01795 MraW methylase family IXO35_019280 PF02381 MraZ protein, putative antitoxin-like IXO35_019300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IXO35_019310 PF02021 Uncharacterised protein family UPF0102 IXO35_019315 PF04307 LexA-binding, inner membrane-associated putative hydrolase IXO35_019320 PF02913 FAD linked oxidases, C-terminal domain IXO35_019320 PF01565 FAD binding domain IXO35_019325 PF00486 Transcriptional regulatory protein, C terminal IXO35_019325 PF00072 Response regulator receiver domain IXO35_019330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_019330 PF00512 His Kinase A (phospho-acceptor) domain IXO35_019330 PF02702 Osmosensitive K+ channel His kinase sensor domain IXO35_019330 PF13493 Domain of unknown function (DUF4118) IXO35_019330 PF13492 GAF domain IXO35_019335 PF02669 K+-transporting ATPase, c chain IXO35_019345 PF03814 Potassium-transporting ATPase A subunit IXO35_019365 PF00586 AIR synthase related protein, N-terminal domain IXO35_019365 PF02769 AIR synthase related protein, C-terminal domain IXO35_019370 PF01029 NusB family IXO35_019375 PF00885 6,7-dimethyl-8-ribityllumazine synthase IXO35_019380 PF00925 GTP cyclohydrolase II IXO35_019380 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IXO35_019385 PF00677 Lumazine binding domain IXO35_019395 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IXO35_019395 PF01872 RibD C-terminal domain IXO35_019405 PF03477 ATP cone domain IXO35_019415 PF00464 Serine hydroxymethyltransferase IXO35_019435 PF00005 ABC transporter IXO35_019435 PF12848 ABC transporter IXO35_019455 PF00756 Putative esterase IXO35_019465 PF08240 Alcohol dehydrogenase GroES-like domain IXO35_019465 PF00107 Zinc-binding dehydrogenase IXO35_019470 PF02583 Metal-sensitive transcriptional repressor IXO35_019480 PF00072 Response regulator receiver domain IXO35_019480 PF00486 Transcriptional regulatory protein, C terminal IXO35_019485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_019485 PF16527 Two-component sensor protein CpxA, periplasmic domain IXO35_019485 PF00672 HAMP domain IXO35_019485 PF00512 His Kinase A (phospho-acceptor) domain IXO35_019530 PF00672 HAMP domain IXO35_019530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_019530 PF00512 His Kinase A (phospho-acceptor) domain IXO35_019535 PF04107 Glutamate-cysteine ligase family 2(GCS2) IXO35_019545 PF01926 50S ribosome-binding GTPase IXO35_019550 PF00034 Cytochrome c IXO35_019580 PF01609 Transposase DDE domain IXO35_019580 PF05598 Transposase domain (DUF772) IXO35_019595 PF01609 Transposase DDE domain IXO35_019595 PF05598 Transposase domain (DUF772) IXO35_019610 PF01527 Transposase IXO35_019635 PF12627 Probable RNA and SrmB- binding site of polymerase A IXO35_019635 PF01966 HD domain IXO35_019635 PF01743 Poly A polymerase head domain IXO35_019680 PF01522 Polysaccharide deacetylase IXO35_019680 PF14883 Hypothetical glycosyl hydrolase family 13 IXO35_019685 PF00535 Glycosyl transferase family 2 IXO35_019695 PF01979 Amidohydrolase family IXO35_019700 PF01380 SIS domain IXO35_019705 PF00356 Bacterial regulatory proteins, lacI family IXO35_019710 PF07690 Major Facilitator Superfamily IXO35_019715 PF00392 Bacterial regulatory proteins, gntR family IXO35_019715 PF07702 UTRA domain IXO35_019730 PF16355 Domain of unknown function (DUF4982) IXO35_019730 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 IXO35_019730 PF00703 Glycosyl hydrolases family 2 IXO35_019730 PF02836 Glycosyl hydrolases family 2, TIM barrel domain IXO35_019730 PF02837 Glycosyl hydrolases family 2, sugar binding domain IXO35_019780 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IXO35_019785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_019785 PF00512 His Kinase A (phospho-acceptor) domain IXO35_019790 PF00072 Response regulator receiver domain IXO35_019795 PF01590 GAF domain IXO35_019795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_019795 PF00512 His Kinase A (phospho-acceptor) domain IXO35_019795 PF08446 PAS fold IXO35_019795 PF00360 Phytochrome region IXO35_019800 PF04972 BON domain IXO35_019805 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IXO35_019805 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IXO35_019810 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain IXO35_019810 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IXO35_019845 PF01467 Cytidylyltransferase-like IXO35_019845 PF00293 NUDIX domain IXO35_019855 PF11818 C-terminal domain of tail specific protease (DUF3340) IXO35_019855 PF00595 PDZ domain IXO35_019855 PF03572 Peptidase family S41 IXO35_019855 PF17804 Tail specific protease N-terminal domain IXO35_019860 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family IXO35_019860 PF04055 Radical SAM superfamily IXO35_019865 PF03099 Biotin/lipoate A/B protein ligase family IXO35_019870 PF04359 Protein of unknown function (DUF493) IXO35_019880 PF07943 Penicillin-binding protein 5, C-terminal domain IXO35_019880 PF00768 D-alanyl-D-alanine carboxypeptidase IXO35_019885 PF03330 Lytic transglycolase IXO35_019885 PF05036 Sporulation related domain IXO35_019890 PF13406 Transglycosylase SLT domain IXO35_019935 PF04717 Type VI secretion system, phage-baseplate injector IXO35_019935 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IXO35_019935 PF13296 Putative type VI secretion system Rhs element Vgr IXO35_019960 PF01098 Cell cycle protein IXO35_019965 PF03717 Penicillin-binding Protein dimerisation domain IXO35_019965 PF00905 Penicillin binding protein transpeptidase domain IXO35_019975 PF04085 rod shape-determining protein MreC IXO35_019985 PF00294 pfkB family carbohydrate kinase IXO35_020005 PF13673 Acetyltransferase (GNAT) domain IXO35_020020 PF13533 Biotin-lipoyl like IXO35_020030 PF01209 ubiE/COQ5 methyltransferase family IXO35_020035 PF00990 Diguanylate cyclase, GGDEF domain IXO35_020035 PF08448 PAS fold IXO35_020040 PF01433 Peptidase family M1 domain IXO35_020040 PF11838 ERAP1-like C-terminal domain IXO35_020055 PF07724 AAA domain (Cdc48 subfamily) IXO35_020055 PF00004 ATPase family associated with various cellular activities (AAA) IXO35_020055 PF10431 C-terminal, D2-small domain, of ClpB protein IXO35_020060 PF00227 Proteasome subunit IXO35_020070 PF02899 Phage integrase, N-terminal SAM-like domain IXO35_020070 PF00589 Phage integrase family IXO35_020080 PF01678 Diaminopimelate epimerase IXO35_020095 PF00326 Prolyl oligopeptidase family IXO35_020095 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain IXO35_020100 PF00155 Aminotransferase class I and II IXO35_020125 PF00326 Prolyl oligopeptidase family IXO35_020125 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain IXO35_020150 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain IXO35_020150 PF03900 Porphobilinogen deaminase, C-terminal domain IXO35_020155 PF04397 LytTr DNA-binding domain IXO35_020155 PF00072 Response regulator receiver domain IXO35_020160 PF07694 5TMR of 5TMR-LYT IXO35_020160 PF06580 Histidine kinase IXO35_020170 PF13632 Glycosyl transferase family group 2 IXO35_020200 PF00916 Sulfate permease family IXO35_020200 PF01740 STAS domain IXO35_020205 PF00150 Cellulase (glycosyl hydrolase family 5) IXO35_020205 PF00553 Cellulose binding domain IXO35_020220 PF00990 Diguanylate cyclase, GGDEF domain IXO35_020220 PF00563 EAL domain IXO35_020220 PF03707 Bacterial signalling protein N terminal repeat IXO35_020255 PF01204 Trehalase IXO35_020275 PF01544 CorA-like Mg2+ transporter protein IXO35_020285 PF00324 Amino acid permease IXO35_020290 PF00553 Cellulose binding domain IXO35_020290 PF00041 Fibronectin type III domain IXO35_020290 PF01341 Glycosyl hydrolases family 6 IXO35_020295 PF03330 Lytic transglycolase IXO35_020300 PF00892 EamA-like transporter family IXO35_020320 PF07759 Protein of unknown function (DUF1615) IXO35_020355 PF00106 short chain dehydrogenase IXO35_020375 PF04715 Anthranilate synthase component I, N terminal region IXO35_020375 PF00425 chorismate binding enzyme IXO35_020380 PF00781 Diacylglycerol kinase catalytic domain IXO35_020385 PF00583 Acetyltransferase (GNAT) family IXO35_020390 PF00834 Ribulose-phosphate 3 epimerase family IXO35_020395 PF00226 DnaJ domain IXO35_020395 PF05099 Tellurite resistance protein TerB IXO35_020400 PF01259 SAICAR synthetase IXO35_020440 PF13244 Domain of unknown function (DUF4040) IXO35_020440 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter IXO35_020440 PF00361 Proton-conducting membrane transporter IXO35_020440 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IXO35_020445 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IXO35_020450 PF00361 Proton-conducting membrane transporter IXO35_020460 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) IXO35_020465 PF03334 Na+/H+ antiporter subunit IXO35_020475 PF04209 homogentisate 1,2-dioxygenase IXO35_020480 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IXO35_020485 PF01047 MarR family IXO35_020495 PF00854 POT family IXO35_020500 PF03301 Tryptophan 2,3-dioxygenase IXO35_020510 PF00676 Dehydrogenase E1 component IXO35_020550 PF02803 Thiolase, C-terminal domain IXO35_020550 PF00108 Thiolase, N-terminal domain IXO35_020620 PF01427 D-ala-D-ala dipeptidase IXO35_020625 PF01510 N-acetylmuramoyl-L-alanine amidase IXO35_020635 PF13378 Enolase C-terminal domain-like IXO35_020635 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IXO35_020660 PF13520 Amino acid permease IXO35_020685 PF05360 yiaA/B two helix domain IXO35_020690 PF07995 Glucose / Sorbosone dehydrogenase IXO35_020725 PF14310 Fibronectin type III-like domain IXO35_020725 PF00933 Glycosyl hydrolase family 3 N terminal domain IXO35_020725 PF01915 Glycosyl hydrolase family 3 C-terminal domain IXO35_020730 PF02152 Dihydroneopterin aldolase IXO35_020735 PF00814 Glycoprotease family IXO35_020740 PF01165 Ribosomal protein S21 IXO35_020745 PF09424 Yqey-like protein IXO35_020755 PF03631 Virulence factor BrkB IXO35_020760 PF10410 DnaB-helicase binding domain of primase IXO35_020760 PF08278 DNA primase DnaG DnaB-binding IXO35_020760 PF08275 DNA primase catalytic core, N-terminal domain IXO35_020760 PF01807 CHC2 zinc finger IXO35_020780 PF13593 SBF-like CPA transporter family (DUF4137) IXO35_020795 PF01040 UbiA prenyltransferase family IXO35_020820 PF00510 Cytochrome c oxidase subunit III IXO35_020825 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 IXO35_020835 PF00115 Cytochrome C and Quinol oxidase polypeptide I IXO35_020840 PF02790 Cytochrome C oxidase subunit II, transmembrane domain IXO35_020840 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IXO35_020850 PF18327 Proline utilization A proline dehydrogenase N-terminal domain IXO35_020850 PF14850 DNA-binding domain of Proline dehydrogenase IXO35_020850 PF01619 Proline dehydrogenase IXO35_020850 PF00171 Aldehyde dehydrogenase family IXO35_020865 PF00210 Ferritin-like domain IXO35_020875 PF00293 NUDIX domain IXO35_020890 PF00380 Ribosomal protein S9/S16 IXO35_020895 PF00572 Ribosomal protein L13 IXO35_020900 PF03232 Ubiquinone biosynthesis protein COQ7 IXO35_020905 PF00893 Small Multidrug Resistance protein IXO35_020910 PF02675 S-adenosylmethionine decarboxylase IXO35_020915 PF00325 Bacterial regulatory proteins, crp family IXO35_020915 PF00027 Cyclic nucleotide-binding domain IXO35_020925 PF00218 Indole-3-glycerol phosphate synthase IXO35_020930 PF00591 Glycosyl transferase family, a/b domain IXO35_020930 PF02885 Glycosyl transferase family, helical bundle domain IXO35_020940 PF00117 Glutamine amidotransferase class-I IXO35_020960 PF03971 Monomeric isocitrate dehydrogenase IXO35_020975 PF05598 Transposase domain (DUF772) IXO35_020995 PF05598 Transposase domain (DUF772) IXO35_020995 PF01609 Transposase DDE domain IXO35_021015 PF01609 Transposase DDE domain IXO35_021015 PF05598 Transposase domain (DUF772) IXO35_021030 PF14489 QueF-like protein IXO35_021030 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term IXO35_021040 PF01546 Peptidase family M20/M25/M40 IXO35_021040 PF07687 Peptidase dimerisation domain IXO35_021045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IXO35_021050 PF00873 AcrB/AcrD/AcrF family IXO35_021055 PF00873 AcrB/AcrD/AcrF family IXO35_021065 PF07063 Domain of unknown function (DUF1338) IXO35_021105 PF00581 Rhodanese-like domain IXO35_021110 PF02556 Preprotein translocase subunit SecB IXO35_021115 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IXO35_021115 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IXO35_021125 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IXO35_021125 PF00205 Thiamine pyrophosphate enzyme, central domain IXO35_021125 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IXO35_021135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_021135 PF00512 His Kinase A (phospho-acceptor) domain IXO35_021140 PF02954 Bacterial regulatory protein, Fis family IXO35_021140 PF00072 Response regulator receiver domain IXO35_021140 PF00158 Sigma-54 interaction domain IXO35_021155 PF07690 Major Facilitator Superfamily IXO35_021160 PF00588 SpoU rRNA Methylase family IXO35_021175 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IXO35_021175 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IXO35_021180 PF02661 Fic/DOC family IXO35_021180 PF13784 Fic/DOC family N-terminal IXO35_021185 PF01555 DNA methylase IXO35_021195 PF00561 alpha/beta hydrolase fold IXO35_021200 PF03692 Putative zinc- or iron-chelating domain IXO35_021205 PF00501 AMP-binding enzyme IXO35_021210 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family IXO35_021220 PF05598 Transposase domain (DUF772) IXO35_021230 PF01966 HD domain IXO35_021230 PF11871 Domain of unknown function (DUF3391) IXO35_021235 PF07690 Major Facilitator Superfamily IXO35_021260 PF00132 Bacterial transferase hexapeptide (six repeats) IXO35_021265 PF03692 Putative zinc- or iron-chelating domain IXO35_021270 PF00920 Dehydratase family IXO35_021275 PF13495 Phage integrase, N-terminal SAM-like domain IXO35_021275 PF00589 Phage integrase family IXO35_021295 PF05598 Transposase domain (DUF772) IXO35_021295 PF01609 Transposase DDE domain IXO35_021305 PF01218 Coproporphyrinogen III oxidase IXO35_021310 PF01367 5'-3' exonuclease, C-terminal SAM fold IXO35_021310 PF00476 DNA polymerase family A IXO35_021310 PF01612 3'-5' exonuclease IXO35_021310 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IXO35_021345 PF01966 HD domain IXO35_021345 PF13286 Phosphohydrolase-associated domain IXO35_021350 PF00456 Transketolase, thiamine diphosphate binding domain IXO35_021350 PF17831 Pyruvate dehydrogenase E1 component middle domain IXO35_021365 PF03377 TAL effector repeat IXO35_021405 PF04264 YceI-like domain IXO35_021410 PF00881 Nitroreductase family IXO35_021435 PF02592 Putative vitamin uptake transporter IXO35_021440 PF03710 Glutamate-ammonia ligase adenylyltransferase IXO35_021440 PF08335 GlnD PII-uridylyltransferase IXO35_021450 PF08450 SMP-30/Gluconolactonase/LRE-like region IXO35_021490 PF00793 DAHP synthetase I family IXO35_021505 PF07715 TonB-dependent Receptor Plug Domain IXO35_021505 PF00593 TonB dependent receptor IXO35_021515 PF00118 TCP-1/cpn60 chaperonin family IXO35_021520 PF00166 Chaperonin 10 Kd subunit IXO35_021545 PF07992 Pyridine nucleotide-disulphide oxidoreductase IXO35_021555 PF04542 Sigma-70 region 2 IXO35_021555 PF04545 Sigma-70, region 4 IXO35_021560 PF03167 Uracil DNA glycosylase superfamily IXO35_021565 PF00072 Response regulator receiver domain IXO35_021570 PF18075 FtsX extracellular domain IXO35_021575 PF00005 ABC transporter IXO35_021580 PF00270 DEAD/DEAH box helicase IXO35_021580 PF00271 Helicase conserved C-terminal domain IXO35_021580 PF12300 ATP-dependent RNA helicase RhlB IXO35_021585 PF00085 Thioredoxin IXO35_021590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IXO35_021590 PF07497 Rho termination factor, RNA-binding domain IXO35_021590 PF07498 Rho termination factor, N-terminal domain IXO35_021605 PF01103 Surface antigen IXO35_021605 PF17243 POTRA domain TamA domain 1 IXO35_021610 PF04357 TamB, inner membrane protein subunit of TAM complex IXO35_021645 PF07977 FabA-like domain IXO35_021650 PF01553 Acyltransferase IXO35_021660 PF00550 Phosphopantetheine attachment site IXO35_021665 PF04820 Tryptophan halogenase IXO35_021715 PF01638 HxlR-like helix-turn-helix IXO35_021720 PF05368 NmrA-like family IXO35_021730 PF03812 2-keto-3-deoxygluconate permease IXO35_021735 PF01717 Cobalamin-independent synthase, Catalytic domain IXO35_021735 PF08267 Cobalamin-independent synthase, N-terminal domain IXO35_021745 PF03358 NADPH-dependent FMN reductase IXO35_021750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO35_021750 PF03466 LysR substrate binding domain IXO35_021755 PF02677 Epoxyqueuosine reductase QueH IXO35_021775 PF00486 Transcriptional regulatory protein, C terminal IXO35_021775 PF00072 Response regulator receiver domain IXO35_021780 PF00551 Formyl transferase IXO35_021800 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IXO35_021800 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IXO35_021805 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IXO35_021810 PF02146 Sir2 family IXO35_021820 PF07690 Major Facilitator Superfamily IXO35_021825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO35_021825 PF03466 LysR substrate binding domain IXO35_021840 PF01026 TatD related DNase IXO35_021885 PF00266 Aminotransferase class-V IXO35_021900 PF09349 OHCU decarboxylase IXO35_021900 PF01014 Uricase IXO35_021905 PF13454 FAD-NAD(P)-binding IXO35_021955 PF00326 Prolyl oligopeptidase family IXO35_021960 PF18140 Propionyl-coenzyme A carboxylase BT domain IXO35_021960 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IXO35_021960 PF00364 Biotin-requiring enzyme IXO35_021960 PF00289 Biotin carboxylase, N-terminal domain IXO35_021960 PF02785 Biotin carboxylase C-terminal domain IXO35_021965 PF01039 Carboxyl transferase domain IXO35_021970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IXO35_021970 PF02770 Acyl-CoA dehydrogenase, middle domain IXO35_021970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IXO35_022020 PF07683 Cobalamin synthesis protein cobW C-terminal domain IXO35_022020 PF02492 CobW/HypB/UreG, nucleotide-binding domain IXO35_022040 PF03969 AFG1-like ATPase IXO35_022055 PF00593 TonB dependent receptor IXO35_022055 PF07715 TonB-dependent Receptor Plug Domain IXO35_022060 PF13181 Tetratricopeptide repeat IXO35_022065 PF02092 Glycyl-tRNA synthetase beta subunit IXO35_022065 PF05746 DALR anticodon binding domain IXO35_022070 PF02091 Glycyl-tRNA synthetase alpha subunit IXO35_022075 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IXO35_022075 PF00437 Type II/IV secretion system protein IXO35_022090 PF00117 Glutamine amidotransferase class-I IXO35_022090 PF00958 GMP synthase C terminal domain IXO35_022100 PF00902 Sec-independent protein translocase protein (TatC) IXO35_022105 PF02416 mttA/Hcf106 family IXO35_022110 PF02416 mttA/Hcf106 family IXO35_022120 PF00762 Ferrochelatase IXO35_022125 PF12697 Alpha/beta hydrolase family IXO35_022145 PF04381 Putative exonuclease, RdgC IXO35_022150 PF01171 PP-loop family IXO35_022160 PF00356 Bacterial regulatory proteins, lacI family IXO35_022165 PF07477 Glycosyl hydrolase family 67 C-terminus IXO35_022165 PF07488 Glycosyl hydrolase family 67 middle domain IXO35_022165 PF03648 Glycosyl hydrolase family 67 N-terminus IXO35_022175 PF13378 Enolase C-terminal domain-like IXO35_022175 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IXO35_022180 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain IXO35_022180 PF04616 Glycosyl hydrolases family 43 IXO35_022185 PF07691 PA14 domain IXO35_022185 PF14310 Fibronectin type III-like domain IXO35_022185 PF00933 Glycosyl hydrolase family 3 N terminal domain IXO35_022185 PF01915 Glycosyl hydrolase family 3 C-terminal domain IXO35_022190 PF01232 Mannitol dehydrogenase Rossmann domain IXO35_022190 PF08125 Mannitol dehydrogenase C-terminal domain IXO35_022210 PF02614 Glucuronate isomerase IXO35_022215 PF00331 Glycosyl hydrolase family 10 IXO35_022215 PF00553 Cellulose binding domain IXO35_022215 PF03422 Carbohydrate binding module (family 6) IXO35_022240 PF04616 Glycosyl hydrolases family 43 IXO35_022285 PF12792 CSS motif domain associated with EAL IXO35_022285 PF00563 EAL domain IXO35_022290 PF00487 Fatty acid desaturase IXO35_022295 PF00175 Oxidoreductase NAD-binding domain IXO35_022295 PF00111 2Fe-2S iron-sulfur cluster binding domain IXO35_022295 PF00970 Oxidoreductase FAD-binding domain IXO35_022300 PF00440 Bacterial regulatory proteins, tetR family IXO35_022325 PF01047 MarR family IXO35_022330 PF02566 OsmC-like protein IXO35_022410 PF01381 Helix-turn-helix IXO35_022415 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB IXO35_022420 PF13538 UvrD-like helicase C-terminal domain IXO35_022425 PF12705 PD-(D/E)XK nuclease superfamily IXO35_022425 PF13361 UvrD-like helicase C-terminal domain IXO35_022425 PF00580 UvrD/REP helicase N-terminal domain IXO35_022430 PF17946 RecC C-terminal domain IXO35_022475 PF00080 Copper/zinc superoxide dismutase (SODC) IXO35_022480 PF00080 Copper/zinc superoxide dismutase (SODC) IXO35_022485 PF02954 Bacterial regulatory protein, Fis family IXO35_022485 PF00072 Response regulator receiver domain IXO35_022485 PF00158 Sigma-54 interaction domain IXO35_022490 PF00512 His Kinase A (phospho-acceptor) domain IXO35_022490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXO35_022490 PF00989 PAS fold IXO35_022495 PF00909 Ammonium Transporter Family IXO35_022500 PF00543 Nitrogen regulatory protein P-II IXO35_022505 PF00120 Glutamine synthetase, catalytic domain IXO35_022505 PF03951 Glutamine synthetase, beta-Grasp domain IXO35_022510 PF02673 Bacitracin resistance protein BacA IXO35_022550 PF03061 Thioesterase superfamily IXO35_022555 PF13091 PLD-like domain IXO35_022570 PF01883 Iron-sulfur cluster assembly protein IXO35_022570 PF10609 NUBPL iron-transfer P-loop NTPase IXO35_022590 PF01381 Helix-turn-helix IXO35_022595 PF13657 HipA N-terminal domain IXO35_022595 PF07804 HipA-like C-terminal domain IXO35_022600 PF10017 Histidine-specific methyltransferase, SAM-dependent IXO35_022605 PF03781 Sulfatase-modifying factor enzyme 1 IXO35_022605 PF12867 DinB superfamily IXO35_022615 PF00528 Binding-protein-dependent transport system inner membrane component IXO35_022620 PF00005 ABC transporter IXO35_022620 PF00571 CBS domain IXO35_022635 PF00005 ABC transporter IXO35_022645 PF01734 Patatin-like phospholipase IXO35_022660 PF01609 Transposase DDE domain IXO35_022660 PF05598 Transposase domain (DUF772) IXO35_022685 PF00248 Aldo/keto reductase family IXO35_022690 PF16884 N-terminal domain of oxidoreductase IXO35_022690 PF00107 Zinc-binding dehydrogenase IXO35_022695 PF00248 Aldo/keto reductase family IXO35_022705 PF00849 RNA pseudouridylate synthase IXO35_022715 PF00271 Helicase conserved C-terminal domain IXO35_022715 PF04408 Helicase associated domain (HA2) IXO35_022715 PF08482 ATP-dependent helicase C-terminal IXO35_022715 PF00270 DEAD/DEAH box helicase IXO35_022720 PF07308 Protein of unknown function (DUF1456) IXO35_022725 PF13378 Enolase C-terminal domain-like IXO35_022725 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IXO35_022730 PF01557 Fumarylacetoacetate (FAA) hydrolase family IXO35_022745 PF00248 Aldo/keto reductase family IXO35_022755 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain IXO35_022755 PF04616 Glycosyl hydrolases family 43 IXO35_022775 PF00072 Response regulator receiver domain IXO35_022775 PF00196 Bacterial regulatory proteins, luxR family IXO35_022780 PF13193 AMP-binding enzyme C-terminal domain IXO35_022780 PF00501 AMP-binding enzyme IXO35_022780 PF16177 Acetyl-coenzyme A synthetase N-terminus IXO35_022795 PF04341 Protein of unknown function, DUF485 IXO35_022800 PF00474 Sodium:solute symporter family IXO35_022815 PF03372 Endonuclease/Exonuclease/phosphatase family IXO35_022825 PF04226 Transglycosylase associated protein IXO35_022830 PF01648 4'-phosphopantetheinyl transferase superfamily IXO35_022835 PF09423 PhoD-like phosphatase IXO35_022835 PF16655 PhoD-like phosphatase, N-terminal domain IXO35_022840 PF09423 PhoD-like phosphatase IXO35_022840 PF16655 PhoD-like phosphatase, N-terminal domain IXO35_022845 PF02527 rRNA small subunit methyltransferase G IXO35_022865 PF00830 Ribosomal L28 family IXO35_022870 PF00471 Ribosomal protein L33 IXO35_022875 PF04909 Amidohydrolase IXO35_022880 PF04303 PrpF protein IXO35_022885 PF03737 Aldolase/RraA IXO35_022890 PF03466 LysR substrate binding domain IXO35_022890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXO35_022895 PF13091 PLD-like domain IXO35_022895 PF13396 Phospholipase_D-nuclease N-terminal IXO35_022910 PF13361 UvrD-like helicase C-terminal domain IXO35_022910 PF00580 UvrD/REP helicase N-terminal domain IXO35_022930 PF13520 Amino acid permease IXO35_022935 PF02646 RmuC family IXO35_022945 PF00255 Glutathione peroxidase IXO35_022965 PF04055 Radical SAM superfamily IXO35_022975 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) IXO35_022990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IXO35_022990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IXO35_023000 PF13180 PDZ domain IXO35_023000 PF03572 Peptidase family S41 IXO35_023005 PF01551 Peptidase family M23 IXO35_023015 PF04389 Peptidase family M28 IXO35_023060 PF02463 RecF/RecN/SMC N terminal domain IXO35_023065 PF01227 GTP cyclohydrolase I IXO35_023090 PF00083 Sugar (and other) transporter IXO35_023145 PF02595 Glycerate kinase family IXO35_023150 PF07690 Major Facilitator Superfamily IXO35_023165 PF17785 PUA-like domain IXO35_023165 PF10672 S-adenosylmethionine-dependent methyltransferase IXO35_023170 PF03741 Integral membrane protein TerC family IXO35_023175 PF01694 Rhomboid family IXO35_023185 PF03009 Glycerophosphoryl diester phosphodiesterase family IXO35_023195 PF01569 PAP2 superfamily IXO35_023200 PF01926 50S ribosome-binding GTPase IXO35_023200 PF12631 MnmE helical domain IXO35_023200 PF10396 GTP-binding protein TrmE N-terminus IXO35_023205 PF01522 Polysaccharide deacetylase IXO35_023210 PF14849 YidC periplasmic domain IXO35_023210 PF02096 60Kd inner membrane protein IXO35_023215 PF00825 Ribonuclease P IXO35_023220 PF00468 Ribosomal protein L34 IXO35_023240 PF04610 TrbL/VirB6 plasmid conjugal transfer protein IXO35_023255 PF03743 Bacterial conjugation TrbI-like protein IXO35_023275 PF01131 DNA topoisomerase IXO35_023275 PF01751 Toprim domain IXO35_023300 PF00239 Resolvase, N terminal domain IXO35_023300 PF02796 Helix-turn-helix domain of resolvase IXO35_023415 PF01883 Iron-sulfur cluster assembly protein IXO35_023415 PF10609 NUBPL iron-transfer P-loop NTPase IXO35_023445 PF02534 Type IV secretory system Conjugative DNA transfer IXO35_023455 PF00437 Type II/IV secretion system protein IXO35_023460 PF04956 TrbC/VIRB2 family IXO35_023470 PF03135 CagE, TrbE, VirB family, component of type IV transporter system IXO35_023475 PF07996 Type IV secretion system proteins IXO35_023485 PF04610 TrbL/VirB6 plasmid conjugal transfer protein IXO35_023495 PF03524 Conjugal transfer protein IXO35_023500 PF03743 Bacterial conjugation TrbI-like protein IXO35_023505 PF00437 Type II/IV secretion system protein IXO35_023520 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain IXO35_023520 PF01464 Transglycosylase SLT domain IXO35_023535 PF02796 Helix-turn-helix domain of resolvase IXO35_023535 PF00239 Resolvase, N terminal domain IXO35_023565 PF02195 ParB-like nuclease domain IXO35_023565 PF17762 HTH domain found in ParB protein IXO35_023570 PF13614 AAA domain