locus-tag	class	description
IXO792_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
IXO792_00020	COG0187	DNA topoisomerase II activity
IXO792_00030	COG0501	Belongs to the peptidase M48B family
IXO792_00060	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
IXO792_00070	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
IXO792_00080	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
IXO792_00090	COG4772	TonB-dependent receptor
IXO792_00110	COG1304	FMN binding
IXO792_00140	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IXO792_00220	COG2826	transposase and inactivated derivatives, IS30 family
IXO792_00245	COG3039	Transposase
IXO792_00255	COG1090	epimerase
IXO792_00265	COG0642	Histidine kinase
IXO792_00275	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
IXO792_00380	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
IXO792_00455	COG1511	domain protein
IXO792_00455	COG3264	Mechanosensitive ion channel
IXO792_00470	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
IXO792_00475	COG2354	Protein conserved in bacteria
IXO792_00480	COG1649	PFAM Uncharacterised BCR, COG1649
IXO792_00500	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
IXO792_00525	COG0702	epimerase
IXO792_00540	COG1858	cytochrome C peroxidase
IXO792_00615	COG0513	Belongs to the DEAD box helicase family
IXO792_00620	COG3039	Transposase
IXO792_00665	COG1136	(ABC) transporter
IXO792_00695	COG1136	(ABC) transporter
IXO792_00740	COG1272	protein, Hemolysin III
IXO792_00745	COG1111	helicase
IXO792_00745	COG1205	dead DEAH box helicase
IXO792_00805	COG0070	glutamate synthase
IXO792_00805	COG0069	glutamate synthase activity
IXO792_00805	COG0067	glutamate synthase
IXO792_00810	COG0493	'glutamate synthase
IXO792_00850	COG1609	Transcriptional regulator
IXO792_00880	COG0366	Alpha amylase catalytic
IXO792_00885	COG0366	Alpha amylase catalytic
IXO792_00925	COG0606	chelatase, subunit chli
IXO792_00965	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
IXO792_00970	COG1166	arginine decarboxylase activity
IXO792_01045	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
IXO792_01070	COG1028	Short-chain dehydrogenase reductase Sdr
IXO792_01095	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
IXO792_01110	COG0210	DNA helicase
IXO792_01125	COG3132	Protein of unknown function, DUF480
IXO792_01130	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
IXO792_01135	COG0284	orotidine-5'-phosphate decarboxylase activity
IXO792_01170	COG2937	Belongs to the GPAT DAPAT family
IXO792_01175	COG0604	alcohol dehydrogenase
IXO792_01175	COG1028	Short-chain dehydrogenase reductase Sdr
IXO792_01175	COG3321	synthase
IXO792_01210	COG3186	Phenylalanine-4-hydroxylase
IXO792_01215	COG1522	sequence-specific DNA binding
IXO792_01260	COG1064	alcohol dehydrogenase
IXO792_01265	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
IXO792_01270	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
IXO792_01280	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
IXO792_01300	COG0676	glucose-6-phosphate 1-epimerase activity
IXO792_01365	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
IXO792_01385	COG2853	Lipoprotein
IXO792_01400	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
IXO792_01405	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
IXO792_01410	COG1127	ABC transporter
IXO792_01485	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
IXO792_01490	COG3265	gluconokinase activity
IXO792_01495	COG2211	Major facilitator Superfamily
IXO792_01500	COG3459	Glycosyltransferase 36 associated
IXO792_01510	COG2205	protein histidine kinase activity
IXO792_01520	COG1414	Transcriptional regulator
IXO792_01525	COG0738	Major facilitator superfamily
IXO792_01530	COG3254	rhamnose metabolic process
IXO792_01560	COG0339	signal peptide processing
IXO792_01590	COG0564	pseudouridine synthase activity
IXO792_01600	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
IXO792_01610	COG1181	Belongs to the D-alanine--D-alanine ligase family
IXO792_01650	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
IXO792_01660	COG0842	Transport permease protein
IXO792_01665	COG1131	(ABC) transporter
IXO792_01695	COG1476	TRANSCRIPTIONal
IXO792_01705	COG4555	ABC transporter
IXO792_01740	COG0625	glutathione transferase activity
IXO792_01785	COG0583	DNA-binding transcription factor activity
IXO792_01825	COG1199	ATP-dependent helicase activity
IXO792_01845	COG1566	PFAM secretion protein HlyD family protein
IXO792_01865	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
IXO792_01905	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
IXO792_01905	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
IXO792_01910	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
IXO792_01925	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
IXO792_01960	COG3237	CsbD-like
IXO792_01965	COG0180	Tryptophanyl-tRNA synthetase
IXO792_01970	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
IXO792_02015	COG0753	catalase activity
IXO792_02020	COG1595	DNA-templated transcription, initiation
IXO792_02030	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
IXO792_02040	COG0628	permease
IXO792_02050	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
IXO792_02055	COG1040	competence protein
IXO792_02060	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
IXO792_02065	COG0156	8-amino-7-oxononanoate synthase activity
IXO792_02075	COG1028	Short-chain dehydrogenase reductase Sdr
IXO792_02090	COG0463	Glycosyl transferase, family 2
IXO792_02100	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
IXO792_02105	COG3100	YcgL domain-containing protein
IXO792_02125	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
IXO792_02130	COG3039	Transposase
IXO792_02190	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
IXO792_02205	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
IXO792_02210	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
IXO792_02220	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
IXO792_02225	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
IXO792_02230	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
IXO792_02280	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
IXO792_02295	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
IXO792_02360	COG0358	DNA primase activity
IXO792_02365	COG1295	ribonuclease BN
IXO792_02375	COG1610	YqeY-like protein
IXO792_02385	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
IXO792_02390	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
IXO792_02435	COG2133	pyrroloquinoline quinone binding
IXO792_02440	COG4682	membrane
IXO792_02465	COG0531	amino acid
IXO792_02490	COG4948	Mandelate Racemase Muconate Lactonizing
IXO792_02500	COG3023	N-Acetylmuramoyl-L-alanine amidase
IXO792_02505	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
IXO792_02575	COG0183	Belongs to the thiolase family
IXO792_02615	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
IXO792_02625	COG3483	tryptophan 2,3-dioxygenase activity
IXO792_02630	COG3104	oligopeptide transport
IXO792_02660	COG1320	monovalent cation:proton antiporter activity
IXO792_02665	COG2212	antiporter activity
IXO792_02675	COG0651	ATP synthesis coupled electron transport
IXO792_02680	COG1006	Multisubunit Na H antiporter MnhC subunit
IXO792_02685	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
IXO792_02685	COG2111	Na H antiporter
IXO792_02735	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
IXO792_02745	COG0456	acetyltransferase
IXO792_02775	COG4221	oxidoreductase activity
IXO792_02830	COG0697	spore germination
IXO792_02835	COG4305	rare lipoprotein A
IXO792_02840	COG5297	Belongs to the glycosyl hydrolase family 6
IXO792_02845	COG1113	amino acid transport
IXO792_02855	COG0598	Magnesium transport protein CorA
IXO792_02925	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
IXO792_02925	COG5297	Belongs to the glycosyl hydrolase family 6
IXO792_02930	COG0659	secondary active sulfate transmembrane transporter activity
IXO792_02965	COG3275	phosphorelay sensor kinase activity
IXO792_02975	COG0181	hydroxymethylbilane synthase activity
IXO792_03000	COG1505	serine-type exopeptidase activity
IXO792_03015	COG3039	Transposase
IXO792_03020	COG0436	Aminotransferase
IXO792_03050	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
IXO792_03080	COG0308	aminopeptidase N
IXO792_03085	COG2199	diguanylate cyclase activity
IXO792_03135	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IXO792_03140	COG1077	Cell shape determining protein MreB Mrl
IXO792_03145	COG1792	Involved in formation and maintenance of cell shape
IXO792_03160	COG0772	Belongs to the SEDS family
IXO792_03195	COG2951	lytic endotransglycosylase activity
IXO792_03200	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
IXO792_03205	COG1686	Belongs to the peptidase S11 family
IXO792_03215	COG2921	Belongs to the UPF0250 family
IXO792_03240	COG1051	belongs to the nudix hydrolase family
IXO792_03240	COG1056	cytidyltransferase-related domain
IXO792_03275	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
IXO792_03280	COG0673	inositol 2-dehydrogenase activity
IXO792_03285	COG2823	Periplasmic or secreted lipoprotein
IXO792_03290	COG4251	negative regulation of phosphorylation
IXO792_03295	COG0784	Response regulator, receiver
IXO792_03300	COG4191	Histidine kinase
IXO792_03305	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
IXO792_03355	COG3250	beta-galactosidase activity
IXO792_03370	COG2188	Transcriptional regulator
IXO792_03380	COG1609	Transcriptional regulator
IXO792_03385	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
IXO792_03390	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
IXO792_03400	COG1215	transferase activity, transferring glycosyl groups
IXO792_03405	COG1649	PFAM Uncharacterised BCR, COG1649
IXO792_03405	COG0726	polysaccharide deacetylase
IXO792_03485	COG3039	Transposase
IXO792_03490	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
IXO792_03495	COG3039	Transposase
IXO792_03530	COG0218	Necessary for normal cell division and for the maintenance of normal septation
IXO792_03545	COG2205	protein histidine kinase activity
IXO792_03580	COG2205	protein histidine kinase activity
IXO792_03620	COG3039	Transposase
IXO792_03635	COG0488	(ABC) transporter
IXO792_03655	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
IXO792_03675	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
IXO792_03675	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
IXO792_03695	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
IXO792_03700	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
IXO792_03705	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
IXO792_03725	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
IXO792_03730	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
IXO792_03740	COG2205	protein histidine kinase activity
IXO792_03745	COG0745	RESPONSE REGULATOR receiver
IXO792_03750	COG0277	FAD linked oxidase domain protein
IXO792_03755	COG1988	membrane-bound metal-dependent
IXO792_03760	COG0792	nuclease activity
IXO792_03795	COG0275	rRNA processing
IXO792_03800	COG3116	cell division
IXO792_03815	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
IXO792_03820	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
IXO792_03835	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
IXO792_03840	COG1181	Belongs to the D-alanine--D-alanine ligase family
IXO792_03845	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
IXO792_03860	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
IXO792_03870	COG1388	LysM domain
IXO792_03870	COG4942	peptidase
IXO792_03875	COG0653	protein targeting
IXO792_03885	COG0494	nUDIX hydrolase
IXO792_03900	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
IXO792_03910	COG0604	alcohol dehydrogenase
IXO792_03910	COG1028	Short-chain dehydrogenase reductase Sdr
IXO792_03910	COG3321	synthase
IXO792_03965	COG2226	methyltransferase
IXO792_03970	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
IXO792_04005	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
IXO792_04010	COG3039	Transposase
IXO792_04025	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
IXO792_04035	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IXO792_04040	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
IXO792_04050	COG3039	Transposase
IXO792_04070	COG0667	Aldo Keto reductase
IXO792_04125	COG2175	clavaminate synthase activity
IXO792_04135	COG4181	ATPase activity
IXO792_04150	COG0642	Histidine kinase
IXO792_04170	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
IXO792_04190	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
IXO792_04215	COG2967	ApaG domain
IXO792_04220	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
IXO792_04230	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
IXO792_04245	COG0123	including yeast histone deacetylase and acetoin utilization protein
IXO792_04250	COG2096	Adenosyltransferase
IXO792_04260	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
IXO792_04265	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
IXO792_04305	COG0583	DNA-binding transcription factor activity
IXO792_04310	COG0318	PFAM AMP-dependent synthetase and ligase
IXO792_04320	COG1024	Enoyl-CoA hydratase
IXO792_04340	COG3386	PFAM SMP-30 Gluconolaconase
IXO792_04455	COG1902	pentaerythritol trinitrate reductase activity
IXO792_04455	COG0446	pyridine nucleotide-disulphide oxidoreductase
IXO792_04460	COG0604	alcohol dehydrogenase
IXO792_04485	COG0156	8-amino-7-oxononanoate synthase activity
IXO792_04490	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
IXO792_04495	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
IXO792_04500	COG4208	sulfate ABC transporter
IXO792_04505	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
IXO792_04535	COG0588	phosphoglycerate mutase activity
IXO792_04545	COG0285	dihydrofolate synthase activity
IXO792_04565	COG2833	Protein of unknown function (DUF455)
IXO792_04585	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
IXO792_04590	COG0671	phosphoesterase, PA-phosphatase related
IXO792_04595	COG0438	transferase activity, transferring glycosyl groups
IXO792_04605	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
IXO792_04620	COG4783	chaperone-mediated protein folding
IXO792_04645	COG0473	3-isopropylmalate dehydrogenase activity
IXO792_04695	COG0544	peptidyl-prolyl cis-trans isomerase activity
IXO792_04735	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
IXO792_04760	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
IXO792_04770	COG0631	protein serine/threonine phosphatase activity
IXO792_04835	COG0582	viral genome integration into host DNA
IXO792_04845	COG0859	PFAM glycosyl transferase family 9
IXO792_04850	COG3642	lipopolysaccharide core region biosynthetic process
IXO792_04855	COG1234	tRNA 3'-trailer cleavage
IXO792_04860	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
IXO792_04870	COG0315	cyclic pyranopterin monophosphate synthase activity
IXO792_04875	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
IXO792_04880	COG0314	molybdopterin synthase activity
IXO792_04910	COG0537	adenosine 5'-monophosphoramidase activity
IXO792_04930	COG0714	Associated with various cellular activities
IXO792_04950	COG0242	peptide deformylase activity
IXO792_05030	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
IXO792_05035	COG0726	polysaccharide deacetylase
IXO792_05060	COG1162	GTPase activity
IXO792_05085	COG2211	Major facilitator Superfamily
IXO792_05095	COG1609	Transcriptional regulator
IXO792_05100	COG1028	Short-chain dehydrogenase reductase Sdr
IXO792_05105	COG2851	Citrate transporter
IXO792_05120	COG0642	Histidine kinase
IXO792_05130	COG2197	response regulator
IXO792_05145	COG0583	DNA-binding transcription factor activity
IXO792_05160	COG4191	Histidine kinase
IXO792_05180	COG0280	phosphate acetyltransferase
IXO792_05180	COG0281	malic enzyme
IXO792_05245	COG0352	thiamine-phosphate diphosphorylase activity
IXO792_05250	COG1773	rubredoxin
IXO792_05255	COG2912	Transglutaminase-like superfamily
IXO792_05265	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
IXO792_05275	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
IXO792_05300	COG0006	proline dipeptidase activity
IXO792_05330	COG0635	Involved in the biosynthesis of porphyrin-containing compound
IXO792_05345	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
IXO792_05350	COG1561	YicC-like family, N-terminal region
IXO792_05375	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
IXO792_05385	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
IXO792_05410	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
IXO792_05455	COG0714	Associated with various cellular activities
IXO792_05475	COG2304	oxidoreductase activity
IXO792_05495	COG1301	dicarboxylic acid transport
IXO792_05500	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
IXO792_05510	COG0739	heme binding
IXO792_05515	COG1376	ErfK ybiS ycfS ynhG family protein
IXO792_05540	COG1022	Amp-dependent synthetase and ligase
IXO792_05550	COG1028	Short-chain dehydrogenase reductase Sdr
IXO792_05565	COG0642	Histidine kinase
IXO792_05585	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
IXO792_05590	COG4149	molybdate abc transporter
IXO792_05595	COG0725	ABC transporter, periplasmic molybdate-binding protein
IXO792_05600	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
IXO792_05600	COG3453	Protein conserved in bacteria
IXO792_05640	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
IXO792_05665	COG2205	protein histidine kinase activity
IXO792_05670	COG0745	RESPONSE REGULATOR receiver
IXO792_05720	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
IXO792_05725	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
IXO792_05770	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
IXO792_05790	COG2801	Transposase and inactivated derivatives
IXO792_05860	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
IXO792_05870	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
IXO792_05875	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
IXO792_05890	COG1842	Phage shock protein A
IXO792_05915	COG0754	glutathionylspermidine amidase activity
IXO792_05980	COG0531	amino acid
IXO792_05985	COG2197	response regulator
IXO792_06000	COG1113	amino acid transport
IXO792_06020	COG1271	oxidase subunit
IXO792_06025	COG1294	oxidase, subunit
IXO792_06035	COG2239	Acts as a magnesium transporter
IXO792_06040	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
IXO792_06045	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
IXO792_06060	COG1660	Displays ATPase and GTPase activities
IXO792_06065	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
IXO792_06070	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
IXO792_06085	COG1137	ATPase activity
IXO792_06090	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
IXO792_06100	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
IXO792_06110	COG0271	Belongs to the BolA IbaG family
IXO792_06115	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
IXO792_06135	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
IXO792_06150	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
IXO792_06160	COG0628	permease
IXO792_06170	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
IXO792_06175	COG3178	'Phosphotransferase
IXO792_06190	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
IXO792_06195	COG1555	photosystem II stabilization
IXO792_06245	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
IXO792_06255	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
IXO792_06280	COG0228	four-way junction DNA binding
IXO792_06285	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
IXO792_06290	COG0336	Belongs to the RNA methyltransferase TrmD family
IXO792_06305	COG0534	Mate efflux family protein
IXO792_06340	COG0542	response to heat
IXO792_06375	COG4206	TonB-dependent receptor
IXO792_06435	COG0019	diaminopimelate decarboxylase activity
IXO792_06445	COG2814	Major facilitator Superfamily
IXO792_06450	COG4264	IucA IucC family
IXO792_06460	COG4772	TonB-dependent receptor
IXO792_06475	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
IXO792_06475	COG4651	solute:proton antiporter activity
IXO792_06515	COG0488	(ABC) transporter
IXO792_06540	COG0657	acetylesterase activity
IXO792_06540	COG2755	lipolytic protein G-D-S-L family
IXO792_06580	COG2207	Transcriptional regulator
IXO792_06585	COG0326	Molecular chaperone. Has ATPase activity
IXO792_06610	COG3328	transposase activity
IXO792_06615	COG0174	glutamine synthetase
IXO792_06620	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
IXO792_06630	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
IXO792_06645	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
IXO792_06670	COG2146	nitrite reductase [NAD(P)H] activity
IXO792_06680	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
IXO792_06685	COG0719	Fe-S assembly protein
IXO792_06690	COG0396	ATPase activity
IXO792_06695	COG0719	Fe-S assembly protein
IXO792_06700	COG1959	2 iron, 2 sulfur cluster binding
IXO792_06720	COG0693	protein deglycase activity
IXO792_06760	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
IXO792_06790	COG0519	Catalyzes the synthesis of GMP from XMP
IXO792_06800	COG1678	Uncharacterized ACR, COG1678
IXO792_06805	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
IXO792_06835	COG1764	response to oxidative stress
IXO792_06845	COG0384	phenazine biosynthesis protein PhzF
IXO792_06855	COG0527	aspartate kinase activity
IXO792_06880	COG0142	geranyltranstransferase activity
IXO792_06885	COG0629	single-stranded DNA binding
IXO792_06890	COG2203	Gaf domain
IXO792_06890	COG3706	GGDEF domain
IXO792_06890	COG4251	negative regulation of phosphorylation
IXO792_06890	COG5001	Diguanylate cyclase
IXO792_06920	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
IXO792_06965	COG2879	small protein
IXO792_06970	COG1966	Carbon starvation protein
IXO792_06975	COG1741	Belongs to the pirin family
IXO792_07020	COG1741	Belongs to the pirin family
IXO792_07030	COG1515	deoxyribonuclease V activity
IXO792_07035	COG0588	phosphoglycerate mutase activity
IXO792_07050	COG3590	peptidase
IXO792_07065	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
IXO792_07070	COG2199	diguanylate cyclase activity
IXO792_07070	COG2200	EAL domain
IXO792_07070	COG2202	Pas domain
IXO792_07075	COG0835	chemotaxis
IXO792_07080	COG0840	transmembrane signaling receptor activity
IXO792_07085	COG0643	Histidine kinase
IXO792_07085	COG2198	Histidine kinase
IXO792_07100	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
IXO792_07110	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
IXO792_07125	COG2205	protein histidine kinase activity
IXO792_07175	COG3039	Transposase
IXO792_07200	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
IXO792_07205	COG0735	belongs to the Fur family
IXO792_07265	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
IXO792_07270	COG0084	hydrolase, TatD family'
IXO792_07285	COG1960	acyl-CoA dehydrogenase activity
IXO792_07300	COG0367	asparagine synthase
IXO792_07310	COG0305	Participates in initiation and elongation during chromosome replication
IXO792_07315	COG0415	Belongs to the DNA photolyase family
IXO792_07330	COG1028	Short-chain dehydrogenase reductase Sdr
IXO792_07430	COG5001	Diguanylate cyclase
IXO792_07430	COG5002	protein histidine kinase activity
IXO792_07435	COG1187	pseudouridine synthase activity
IXO792_07455	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
IXO792_07465	COG0475	glutathione-regulated potassium exporter activity
IXO792_07470	COG5000	phosphorelay sensor kinase activity
IXO792_07470	COG5002	protein histidine kinase activity
IXO792_07475	COG0745	RESPONSE REGULATOR receiver
IXO792_07505	COG1132	(ABC) transporter
IXO792_07530	COG3039	Transposase
IXO792_07535	COG3039	Transposase
IXO792_07550	COG3039	Transposase
IXO792_07580	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
IXO792_07590	COG4969	Belongs to the N-Me-Phe pilin family
IXO792_07595	COG2194	sulfuric ester hydrolase activity
IXO792_07635	COG0045	succinate-CoA ligase (ADP-forming) activity
IXO792_07640	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
IXO792_07650	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
IXO792_07650	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
IXO792_07655	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
IXO792_07660	COG0564	pseudouridine synthase activity
IXO792_07685	COG3387	PFAM Glycoside hydrolase 15-related
IXO792_07690	COG1877	trehalose-phosphatase activity
IXO792_07730	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
IXO792_07745	COG1595	DNA-templated transcription, initiation
IXO792_07755	COG1946	Acyl-CoA thioesterase
IXO792_07770	COG0824	Thioesterase
IXO792_07775	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
IXO792_07785	COG0211	Belongs to the bacterial ribosomal protein bL27 family
IXO792_07790	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
IXO792_07795	COG0268	Binds directly to 16S ribosomal RNA
IXO792_07800	COG0728	peptidoglycan biosynthetic process
IXO792_07805	COG0196	riboflavin kinase activity
IXO792_07815	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
IXO792_07820	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
IXO792_07835	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
IXO792_07840	COG1845	cytochrome c oxidase, subunit III
IXO792_07845	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
IXO792_07865	COG3209	COG3209 Rhs family protein
IXO792_07875	COG3328	transposase activity
IXO792_07985	COG0632	four-way junction helicase activity
IXO792_07995	COG2255	four-way junction helicase activity
IXO792_08000	COG0824	Thioesterase
IXO792_08010	COG0848	biopolymer transport protein
IXO792_08025	COG2885	chlorophyll binding
IXO792_08035	COG0602	queuosine metabolic process
IXO792_08045	COG1187	pseudouridine synthase activity
IXO792_08105	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
IXO792_08280	COG3179	chitinase
IXO792_08325	COG4695	Portal protein
IXO792_08400	COG0514	ATP-dependent DNA helicase (RecQ)
IXO792_08405	COG0783	Belongs to the Dps family
IXO792_08410	COG1643	Atp-dependent helicase
IXO792_08440	COG0535	radical SAM domain protein
IXO792_08445	COG0535	radical SAM domain protein
IXO792_08465	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
IXO792_08475	COG1215	transferase activity, transferring glycosyl groups
IXO792_08480	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
IXO792_08490	COG1199	ATP-dependent helicase activity
IXO792_08500	COG1397	ADP-ribosylglycohydrolase
IXO792_08510	COG0189	ligase activity
IXO792_08525	COG0835	chemotaxis
IXO792_08530	COG0840	transmembrane signaling receptor activity
IXO792_08535	COG0643	Histidine kinase
IXO792_08535	COG0784	Response regulator, receiver
IXO792_08535	COG2198	Histidine kinase
IXO792_08555	COG3039	Transposase
IXO792_08580	COG1446	asparaginase
IXO792_08625	COG3537	Alpha-1,2-mannosidase
IXO792_08665	COG1472	Belongs to the glycosyl hydrolase 3 family
IXO792_08690	COG3858	chitin binding
IXO792_08690	COG1388	LysM domain
IXO792_08705	COG0837	glucose binding
IXO792_08710	COG1385	rRNA (uridine-N3-)-methyltransferase activity
IXO792_08720	COG0494	nUDIX hydrolase
IXO792_08730	COG3956	TIGRFAM MazG family protein
IXO792_08745	COG0330	HflC and HflK could
IXO792_08760	COG0509	glycine decarboxylation via glycine cleavage system
IXO792_08775	COG3039	Transposase
IXO792_08795	COG1960	acyl-CoA dehydrogenase activity
IXO792_08805	COG1309	transcriptional regulator
IXO792_08810	COG4771	TonB-dependent receptor
IXO792_08820	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
IXO792_08830	COG0463	Glycosyl transferase, family 2
IXO792_08850	COG1272	protein, Hemolysin III
IXO792_08860	COG0739	heme binding
IXO792_08865	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
IXO792_08870	COG0626	cystathionine gamma-synthase activity
IXO792_08880	COG1760	l-serine dehydratase
IXO792_08895	COG2353	YceI-like domain
IXO792_08905	COG2353	YceI-like domain
IXO792_08950	COG3250	beta-galactosidase activity
IXO792_08955	COG3867	Arabinogalactan endo-beta-1,4-galactanase
IXO792_08975	COG1960	acyl-CoA dehydrogenase activity
IXO792_08980	COG1024	Enoyl-CoA hydratase
IXO792_09005	COG1024	Enoyl-CoA hydratase
IXO792_09005	COG1250	3-hydroxyacyl-CoA dehydrogenase
IXO792_09020	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
IXO792_09050	COG1381	Involved in DNA repair and RecF pathway recombination
IXO792_09065	COG2954	triphosphatase activity
IXO792_09075	COG3039	Transposase
IXO792_09080	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
IXO792_09085	COG3380	Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P) . May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers
IXO792_09090	COG3046	protein related to deoxyribodipyrimidine photolyase
IXO792_09100	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
IXO792_09105	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
IXO792_09110	COG1278	Cold shock
IXO792_09130	COG1201	RNA secondary structure unwinding
IXO792_09135	COG1793	dna ligase
IXO792_09145	COG1793	dna ligase
IXO792_09145	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
IXO792_09175	COG0183	Belongs to the thiolase family
IXO792_09210	COG1451	nucleotide metabolic process
IXO792_09225	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
IXO792_09260	COG1047	Peptidyl-prolyl cis-trans
IXO792_09275	COG2824	Alkylphosphonate utilization operon protein PhnA
IXO792_09285	COG1902	pentaerythritol trinitrate reductase activity
IXO792_09290	COG2814	Major facilitator Superfamily
IXO792_09320	COG3039	Transposase
IXO792_09350	COG0392	lysyltransferase activity
IXO792_09350	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
IXO792_09360	COG0251	oxidation-reduction process
IXO792_09365	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
IXO792_09380	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
IXO792_09405	COG1595	DNA-templated transcription, initiation
IXO792_09420	COG2878	Part of a membrane complex involved in electron transport
IXO792_09430	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
IXO792_09430	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
IXO792_09450	COG0833	amino acid
IXO792_09455	COG2040	homocysteine
IXO792_09470	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
IXO792_09510	COG2895	sulfate adenylyltransferase (ATP) activity
IXO792_09510	COG0529	Catalyzes the synthesis of activated sulfate
IXO792_09560	COG1981	membrane
IXO792_09585	COG4771	TonB-dependent receptor
IXO792_09595	COG0825	malonyl-CoA metabolic process
IXO792_09615	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
IXO792_09620	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
IXO792_09640	COG0750	zinc metalloprotease
IXO792_09650	COG0575	Belongs to the CDS family
IXO792_09660	COG0233	cytoplasmic translational termination
IXO792_09675	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
IXO792_09735	COG1393	Belongs to the ArsC family
IXO792_09745	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
IXO792_09750	COG0367	asparagine synthase
IXO792_09760	COG4774	siderophore transport
IXO792_09800	COG1566	PFAM secretion protein HlyD family protein
IXO792_09805	COG2814	Major facilitator Superfamily
IXO792_09860	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
IXO792_09870	COG1960	acyl-CoA dehydrogenase activity
IXO792_09885	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
IXO792_09895	COG2914	Belongs to the UPF0125 (RnfH) family
IXO792_09900	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
IXO792_09910	COG0497	DNA recombination
IXO792_09920	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
IXO792_09930	COG0484	heat shock protein binding
IXO792_09935	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
IXO792_09940	COG0287	Prephenate dehydrogenase
IXO792_09940	COG1605	Chorismate mutase
IXO792_09955	COG0583	DNA-binding transcription factor activity
IXO792_09970	COG1132	(ABC) transporter
IXO792_10005	COG2850	peptidyl-arginine hydroxylation
IXO792_10090	COG1131	(ABC) transporter
IXO792_10095	COG1725	Transcriptional regulator
IXO792_10105	COG0386	Belongs to the glutathione peroxidase family
IXO792_10120	COG2900	Belongs to the SlyX family
IXO792_10135	COG1609	Transcriptional regulator
IXO792_10145	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IXO792_10155	COG0646	methionine synthase
IXO792_10155	COG1410	methionine synthase
IXO792_10160	COG0646	methionine synthase
IXO792_10160	COG1410	methionine synthase
IXO792_10165	COG2226	methyltransferase
IXO792_10170	COG1960	acyl-CoA dehydrogenase activity
IXO792_10195	COG0557	exoribonuclease II activity
IXO792_10215	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
IXO792_10225	COG3039	Transposase
IXO792_10295	COG3842	ATPase activity
IXO792_10305	COG1177	transmembrane transport
IXO792_10315	COG1012	belongs to the aldehyde dehydrogenase family
IXO792_10330	COG4535	Mg2 and Co2 transporter CorC
IXO792_10350	COG1702	phosphate starvation-inducible protein PhoH
IXO792_10375	COG0741	lytic transglycosylase activity
IXO792_10380	COG0723	plastoquinol--plastocyanin reductase activity
IXO792_10385	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
IXO792_10390	COG2857	Cytochrome c1
IXO792_10395	COG0625	glutathione transferase activity
IXO792_10400	COG2969	positive regulation of protein catabolic process
IXO792_10435	COG3328	transposase activity
IXO792_10515	COG1262	PFAM Formylglycine-generating sulfatase enzyme
IXO792_10535	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
IXO792_10540	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
IXO792_10540	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
IXO792_10545	COG0802	atpase or kinase
IXO792_10550	COG0860	N-Acetylmuramoyl-L-alanine amidase
IXO792_10555	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
IXO792_10575	COG1028	Short-chain dehydrogenase reductase Sdr
IXO792_10585	COG0501	Belongs to the peptidase M48B family
IXO792_10595	COG2081	HI0933 family
IXO792_10600	COG4681	YaeQ
IXO792_10605	COG1671	Belongs to the UPF0178 family
IXO792_10615	COG0625	glutathione transferase activity
IXO792_10625	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
IXO792_10630	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
IXO792_10635	COG0513	Belongs to the DEAD box helicase family
IXO792_10640	COG0488	(ABC) transporter
IXO792_10660	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
IXO792_10665	COG0483	inositol monophosphate 1-phosphatase activity
IXO792_10680	COG3300	MHYT domain
IXO792_10680	COG5001	Diguanylate cyclase
IXO792_10685	COG1509	lysine 2,3-aminomutase activity
IXO792_10700	COG0402	S-adenosylhomocysteine deaminase activity
IXO792_10705	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
IXO792_10730	COG4677	pectinesterase activity
IXO792_10740	COG3039	Transposase
IXO792_10775	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
IXO792_10800	COG2166	iron-sulfur cluster assembly
IXO792_10815	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
IXO792_10820	COG0137	argininosuccinate synthase activity
IXO792_10830	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
IXO792_10835	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
IXO792_10850	COG0165	Argininosuccinate lyase
IXO792_10870	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
IXO792_10900	COG1271	oxidase subunit
IXO792_10910	COG4988	ABC transporter
IXO792_10915	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
IXO792_11000	COG3039	Transposase
IXO792_11015	COG3209	COG3209 Rhs family protein
IXO792_11050	COG3039	Transposase
IXO792_11075	COG0643	Histidine kinase
IXO792_11075	COG2198	Histidine kinase
IXO792_11075	COG0784	Response regulator, receiver
IXO792_11135	COG3190	flagellar
IXO792_11185	COG1677	Flagellar hook-basal body complex protein FliE
IXO792_11220	COG1028	Short-chain dehydrogenase reductase Sdr
IXO792_11230	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
IXO792_11250	COG2201	protein-glutamate methylesterase activity
IXO792_11280	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
IXO792_11285	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
IXO792_11325	COG4787	bacterial-type flagellum-dependent cell motility
IXO792_11335	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
IXO792_11340	COG1558	bacterial-type flagellum-dependent cell motility
IXO792_11350	COG0835	chemotaxis
IXO792_11350	COG0784	Response regulator, receiver
IXO792_11370	COG5002	protein histidine kinase activity
IXO792_11380	COG4585	Histidine kinase
IXO792_11385	COG5001	Diguanylate cyclase
IXO792_11410	COG0482	sulfurtransferase activity
IXO792_11430	COG0542	response to heat
IXO792_11455	COG0492	ferredoxin-NADP+ reductase activity
IXO792_11460	COG1674	ftsk spoiiie
IXO792_11480	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
IXO792_11500	COG0038	chloride channel
IXO792_11505	COG0183	Belongs to the thiolase family
IXO792_11510	COG1024	Enoyl-CoA hydratase
IXO792_11510	COG1250	3-hydroxyacyl-CoA dehydrogenase
IXO792_11525	COG0820	rRNA (adenine-C2-)-methyltransferase activity
IXO792_11535	COG1426	Protein conserved in bacteria
IXO792_11545	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
IXO792_11555	COG0303	'Molybdopterin
IXO792_11615	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
IXO792_11655	COG0742	ribosomal rna small subunit methyltransferase
IXO792_11660	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
IXO792_11670	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
IXO792_11675	COG0405	Gamma-glutamyltransferase
IXO792_11700	COG3039	Transposase
IXO792_11730	COG3039	Transposase
IXO792_11780	COG0343	queuine tRNA-ribosyltransferase activity
IXO792_11785	COG1862	Preprotein translocase
IXO792_11790	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
IXO792_11795	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
IXO792_11830	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
IXO792_11840	COG0704	Plays a role in the regulation of phosphate uptake
IXO792_11855	COG0573	inorganic phosphate transmembrane transporter activity
IXO792_11860	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
IXO792_11900	COG3039	Transposase
IXO792_11920	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
IXO792_11930	COG1024	Enoyl-CoA hydratase
IXO792_11940	COG0494	nUDIX hydrolase
IXO792_11985	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
IXO792_11985	COG0116	Belongs to the methyltransferase superfamily
IXO792_12010	COG0667	Aldo Keto reductase
IXO792_12020	COG2925	Exonuclease
IXO792_12050	COG0288	reversible hydration of carbon dioxide
IXO792_12080	COG0316	Belongs to the HesB IscA family
IXO792_12085	COG0360	Binds together with S18 to 16S ribosomal RNA
IXO792_12095	COG0359	binds to the 23S rRNA
IXO792_12105	COG3115	cell septum assembly
IXO792_12120	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
IXO792_12135	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
IXO792_12160	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
IXO792_12170	COG2986	histidine ammonia-lyase
IXO792_12175	COG1228	amidohydrolase
IXO792_12215	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
IXO792_12225	COG0077	Prephenate dehydratase
IXO792_12225	COG1605	Chorismate mutase
IXO792_12230	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
IXO792_12255	COG3039	Transposase
IXO792_12265	COG4566	intracellular signal transduction
IXO792_12310	COG0860	N-Acetylmuramoyl-L-alanine amidase
IXO792_12315	COG1469	GTP cyclohydrolase I activity
IXO792_12325	COG0617	tRNA 3'-terminal CCA addition
IXO792_12335	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
IXO792_12340	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
IXO792_12370	COG1472	Belongs to the glycosyl hydrolase 3 family
IXO792_12390	COG5001	Diguanylate cyclase
IXO792_12390	COG4251	negative regulation of phosphorylation
IXO792_12390	COG3706	GGDEF domain
IXO792_12390	COG2203	Gaf domain
IXO792_12470	COG0386	Belongs to the glutathione peroxidase family
IXO792_12540	COG3039	Transposase
IXO792_12555	COG5002	protein histidine kinase activity
IXO792_12555	COG0784	Response regulator, receiver
IXO792_12555	COG2205	protein histidine kinase activity
IXO792_12595	COG0800	Aldolase
IXO792_12600	COG0129	dihydroxy-acid dehydratase activity
IXO792_12605	COG0363	glucosamine-6-phosphate deaminase activity
IXO792_12615	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
IXO792_12630	COG0354	folic acid binding
IXO792_12645	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
IXO792_12660	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
IXO792_12675	COG4591	ABC-type transport system involved in lipoprotein release permease component
IXO792_12700	COG0811	peptide transport
IXO792_12715	COG1663	tetraacyldisaccharide 4'-kinase activity
IXO792_12725	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
IXO792_12735	COG0322	excinuclease ABC activity
IXO792_12770	COG3328	transposase activity
IXO792_12790	COG3039	Transposase
IXO792_12805	COG2801	Transposase and inactivated derivatives
IXO792_12815	COG2201	protein-glutamate methylesterase activity
IXO792_12880	COG3039	Transposase
IXO792_12905	COG0653	protein targeting
IXO792_12940	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
IXO792_12940	COG0140	phosphoribosyl-ATP diphosphatase activity
IXO792_12950	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
IXO792_12960	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
IXO792_12960	COG0131	Imidazoleglycerol-phosphate dehydratase
IXO792_12975	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
IXO792_12995	COG0124	histidyl-tRNA synthetase
IXO792_13015	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
IXO792_13055	COG1012	belongs to the aldehyde dehydrogenase family
IXO792_13070	COG0167	dihydroorotate dehydrogenase activity
IXO792_13075	COG0812	UDP-N-acetylmuramate dehydrogenase activity
IXO792_13080	COG0697	spore germination
IXO792_13085	COG1794	racemase activity, acting on amino acids and derivatives
IXO792_13110	COG0671	phosphoesterase, PA-phosphatase related
IXO792_13125	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
IXO792_13140	COG2183	response to ionizing radiation
IXO792_13150	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
IXO792_13150	COG0723	plastoquinol--plastocyanin reductase activity
IXO792_13165	COG3243	poly(R)-hydroxyalkanoic acid synthase
IXO792_13175	COG1183	phosphatidylcholine synthase activity
IXO792_13180	COG1028	Short-chain dehydrogenase reductase Sdr
IXO792_13195	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
IXO792_13205	COG0668	transmembrane transport
IXO792_13225	COG1914	H( )-stimulated, divalent metal cation uptake system
IXO792_13270	COG0583	DNA-binding transcription factor activity
IXO792_13275	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
IXO792_13280	COG3002	Belongs to the UPF0753 family
IXO792_13370	COG0582	viral genome integration into host DNA
IXO792_13385	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
IXO792_13405	COG1210	Utp--glucose-1-phosphate uridylyltransferase
IXO792_13415	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
IXO792_13420	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
IXO792_13430	COG0776	regulation of translation
IXO792_13435	COG0539	negative regulation of cytoplasmic translation
IXO792_13440	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
IXO792_13455	COG2957	Belongs to the agmatine deiminase family
IXO792_13465	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
IXO792_13490	COG0395	ABC-type sugar transport system, permease component
IXO792_13495	COG1175	transmembrane transport
IXO792_13525	COG2350	Protein conserved in bacteria
IXO792_13530	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
IXO792_13535	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
IXO792_13540	COG1187	pseudouridine synthase activity
IXO792_13565	COG0436	Aminotransferase
IXO792_13630	COG0277	FAD linked oxidase domain protein
IXO792_13635	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
IXO792_13645	COG0531	amino acid
IXO792_13650	COG0531	amino acid
IXO792_13655	COG0235	Class ii aldolase
IXO792_13660	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
IXO792_13740	COG0583	DNA-binding transcription factor activity
IXO792_13750	COG3039	Transposase
IXO792_13830	COG0174	glutamine synthetase
IXO792_13835	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
IXO792_13845	COG0477	Major facilitator Superfamily
IXO792_13855	COG0243	molybdopterin cofactor binding
IXO792_13865	COG2223	nitrite transmembrane transporter activity
IXO792_13875	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
IXO792_13880	COG1121	(ABC) transporter
IXO792_13890	COG2733	membrane
IXO792_13895	COG5002	protein histidine kinase activity
IXO792_13895	COG2205	protein histidine kinase activity
IXO792_13895	COG0784	Response regulator, receiver
IXO792_13905	COG3039	Transposase
IXO792_13910	COG2902	Dehydrogenase
IXO792_13920	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IXO792_13925	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
IXO792_13950	COG1609	Transcriptional regulator
IXO792_13955	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
IXO792_13955	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
IXO792_13960	COG1105	Belongs to the carbohydrate kinase PfkB family
IXO792_13965	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IXO792_13965	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IXO792_13980	COG3039	Transposase
IXO792_14005	COG3039	Transposase
IXO792_14095	COG4771	TonB-dependent receptor
IXO792_14105	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
IXO792_14125	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
IXO792_14130	COG1360	Flagellar Motor Protein
IXO792_14140	COG0835	chemotaxis
IXO792_14150	COG0745	RESPONSE REGULATOR receiver
IXO792_14170	COG0840	transmembrane signaling receptor activity
IXO792_14180	COG0840	transmembrane signaling receptor activity
IXO792_14190	COG0840	transmembrane signaling receptor activity
IXO792_14200	COG0840	transmembrane signaling receptor activity
IXO792_14205	COG0840	transmembrane signaling receptor activity
IXO792_14210	COG0840	transmembrane signaling receptor activity
IXO792_14215	COG0840	transmembrane signaling receptor activity
IXO792_14230	COG0835	chemotaxis
IXO792_14250	COG3039	Transposase
IXO792_14310	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
IXO792_14340	COG0318	PFAM AMP-dependent synthetase and ligase
IXO792_14345	COG1024	Enoyl-CoA hydratase
IXO792_14350	COG0784	Response regulator, receiver
IXO792_14350	COG2198	Histidine kinase
IXO792_14350	COG2205	protein histidine kinase activity
IXO792_14360	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
IXO792_14415	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
IXO792_14425	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
IXO792_14430	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
IXO792_14440	COG0505	Belongs to the CarA family
IXO792_14445	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
IXO792_14455	COG2258	MOSC domain
IXO792_14460	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
IXO792_14510	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
IXO792_14530	COG0477	Major facilitator Superfamily
IXO792_14540	COG1070	Carbohydrate kinase
IXO792_14550	COG1501	Belongs to the glycosyl hydrolase 31 family
IXO792_14565	COG0800	Aldolase
IXO792_14570	COG4948	Mandelate Racemase Muconate Lactonizing
IXO792_14580	COG3734	2-keto-3-deoxy-galactonokinase
IXO792_14585	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
IXO792_14595	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
IXO792_14610	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
IXO792_14615	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
IXO792_14625	COG0351	phosphomethylpyrimidine kinase
IXO792_14655	COG0583	DNA-binding transcription factor activity
IXO792_14660	COG1741	Belongs to the pirin family
IXO792_14680	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
IXO792_14685	COG0305	Participates in initiation and elongation during chromosome replication
IXO792_14710	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
IXO792_14715	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
IXO792_14720	COG2137	regulation of response to DNA damage stimulus
IXO792_14725	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
IXO792_14740	COG1546	Belongs to the CinA family
IXO792_14745	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
IXO792_14755	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
IXO792_14760	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
IXO792_14770	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
IXO792_14775	COG1534	Rna-binding protein
IXO792_14790	COG1238	metal cluster binding
IXO792_14795	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
IXO792_14800	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
IXO792_14805	COG2840	Smr protein MutS2
IXO792_14815	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
IXO792_14825	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
IXO792_14830	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
IXO792_14835	COG0148	phosphopyruvate hydratase activity
IXO792_14845	COG2877	3-deoxy-8-phosphooctulonate synthase activity
IXO792_14850	COG0504	CTP synthase activity
IXO792_14880	COG0306	phosphate transporter
IXO792_14890	COG1253	flavin adenine dinucleotide binding
IXO792_14905	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
IXO792_14915	COG0477	Major facilitator Superfamily
IXO792_14925	COG1132	(ABC) transporter
IXO792_14930	COG1136	(ABC) transporter
IXO792_14945	COG0438	transferase activity, transferring glycosyl groups
IXO792_14955	COG2264	protein methyltransferase activity
IXO792_14985	COG2244	polysaccharide biosynthetic process
IXO792_15035	COG1595	DNA-templated transcription, initiation
IXO792_15050	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
IXO792_15070	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
IXO792_15100	COG2201	protein-glutamate methylesterase activity
IXO792_15120	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
IXO792_15175	COG1858	cytochrome C peroxidase
IXO792_15205	COG0515	serine threonine protein kinase
IXO792_15210	COG0631	protein serine/threonine phosphatase activity
IXO792_15330	COG3039	Transposase
IXO792_15395	COG2154	pterin-4-alpha-carbinolamine dehydratase
IXO792_15405	COG0428	transporter
IXO792_15410	COG0428	transporter
IXO792_15415	COG3064	Membrane
IXO792_15425	COG1530	ribonuclease E activity
IXO792_15440	COG1054	Belongs to the UPF0176 family
IXO792_15460	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
IXO792_15500	COG3039	Transposase
IXO792_15510	COG3039	Transposase
IXO792_15550	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
IXO792_15550	COG1648	precorrin-2 dehydrogenase activity
IXO792_15575	COG0746	molybdenum cofactor guanylyltransferase activity
IXO792_15660	COG4206	TonB-dependent receptor
IXO792_15690	COG0531	amino acid
IXO792_15705	COG0006	proline dipeptidase activity
IXO792_15715	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
IXO792_15730	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
IXO792_15735	COG3938	Belongs to the proline racemase family
IXO792_15745	COG0552	protein localization to endoplasmic reticulum
IXO792_15755	COG1194	a g-specific adenine glycosylase
IXO792_15765	COG0784	Response regulator, receiver
IXO792_15765	COG4191	Histidine kinase
IXO792_15840	COG3039	Transposase
IXO792_15870	COG3040	lipid binding
IXO792_15915	COG0438	transferase activity, transferring glycosyl groups
IXO792_15925	COG0438	transferase activity, transferring glycosyl groups
IXO792_15930	COG0438	transferase activity, transferring glycosyl groups
IXO792_15985	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
IXO792_16000	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
IXO792_16035	COG0556	nucleotide-excision repair
IXO792_16040	COG4969	Belongs to the N-Me-Phe pilin family
IXO792_16080	COG1611	Belongs to the LOG family
IXO792_16095	COG2095	MarC family integral membrane protein
IXO792_16105	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
IXO792_16140	COG1185	polyribonucleotide nucleotidyltransferase activity
IXO792_16145	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
IXO792_16165	COG0195	Participates in both transcription termination and antitermination
IXO792_16170	COG0779	Required for maturation of 30S ribosomal subunits
IXO792_16180	COG1007	ATP synthesis coupled electron transport
IXO792_16210	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
IXO792_16215	COG1034	ATP synthesis coupled electron transport
IXO792_16220	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
IXO792_16225	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
IXO792_16230	COG0649	NAD binding
IXO792_16235	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
IXO792_16245	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
IXO792_16260	COG0149	triose-phosphate isomerase activity
IXO792_16310	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
IXO792_16315	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
IXO792_16320	COG0159	tryptophan synthase activity
IXO792_16340	COG0135	phosphoribosylanthranilate isomerase activity
IXO792_16345	COG0101	tRNA pseudouridine synthase activity
IXO792_16365	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
IXO792_16370	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
IXO792_16375	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
IXO792_16380	COG2890	protein-(glutamine-N5) methyltransferase activity
IXO792_16405	COG0433	COG0433 Predicted ATPase
IXO792_16410	COG2826	transposase and inactivated derivatives, IS30 family
IXO792_16425	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
IXO792_16435	COG0412	Dienelactone hydrolase
IXO792_16455	COG0717	Belongs to the dCTP deaminase family
IXO792_16460	COG0489	protein tyrosine kinase activity
IXO792_16500	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
IXO792_16505	COG2311	Membrane
IXO792_16510	COG1047	Peptidyl-prolyl cis-trans
IXO792_16515	COG0791	NLP P60 protein
IXO792_16520	COG0791	NLP P60 protein
IXO792_16535	COG1301	dicarboxylic acid transport
IXO792_16540	COG1785	Belongs to the alkaline phosphatase family
IXO792_16545	COG0037	tRNA processing
IXO792_16550	COG1722	exodeoxyribonuclease VII activity
IXO792_16555	COG0142	geranyltranstransferase activity
IXO792_16580	COG0312	modulator of DNA gyrase
IXO792_16585	COG3028	Belongs to the UPF0307 family
IXO792_16590	COG0312	modulator of DNA gyrase
IXO792_16600	COG3164	Protein of unknown function
IXO792_16615	COG2968	Membrane
IXO792_16645	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
IXO792_16670	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
IXO792_16695	COG3118	belongs to the thioredoxin family
IXO792_16735	COG3039	Transposase
IXO792_16775	COG3039	Transposase
IXO792_16875	COG2022	thiamine diphosphate biosynthetic process
IXO792_16885	COG0471	metal ion transport
IXO792_16885	COG3273	potassium ion transport
IXO792_16915	COG1970	mechanosensitive ion channel activity
IXO792_16935	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
IXO792_16955	COG0308	aminopeptidase N
IXO792_16960	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
IXO792_16970	COG2895	sulfate adenylyltransferase (ATP) activity
IXO792_16970	COG0529	Catalyzes the synthesis of activated sulfate
IXO792_16975	COG0175	sulfate reduction
IXO792_16980	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
IXO792_16985	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
IXO792_16990	COG0175	sulfate reduction
IXO792_17010	COG0784	Response regulator, receiver
IXO792_17010	COG2198	Histidine kinase
IXO792_17010	COG2205	protein histidine kinase activity
IXO792_17060	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
IXO792_17065	COG3588	fructose-bisphosphate aldolase
IXO792_17070	COG0469	pyruvate kinase activity
IXO792_17110	COG0753	catalase activity
IXO792_17135	COG1917	Cupin 2, conserved barrel domain protein
IXO792_17135	COG2207	Transcriptional regulator
IXO792_17155	COG0823	Involved in the tonB-independent uptake of proteins
IXO792_17155	COG1506	peptidase
IXO792_17175	COG1297	OPT oligopeptide transporter protein
IXO792_17190	COG0587	DNA-directed DNA polymerase activity
IXO792_17260	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
IXO792_17265	COG1708	protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity
IXO792_17270	COG1708	protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity
IXO792_17275	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
IXO792_17295	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
IXO792_17355	COG3039	Transposase
IXO792_17485	COG3179	chitinase
IXO792_17510	COG3039	Transposase
IXO792_17540	COG3179	chitinase
IXO792_17555	COG3328	transposase activity
IXO792_17630	COG1262	PFAM Formylglycine-generating sulfatase enzyme
IXO792_17640	COG1262	PFAM Formylglycine-generating sulfatase enzyme
IXO792_17735	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
IXO792_17750	COG2197	response regulator
IXO792_17755	COG4585	Histidine kinase
IXO792_17770	COG2894	cell division
IXO792_17775	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
IXO792_17785	COG0642	Histidine kinase
IXO792_17790	COG0745	RESPONSE REGULATOR receiver
IXO792_17795	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
IXO792_17805	COG2194	sulfuric ester hydrolase activity
IXO792_17835	COG3551	Protein conserved in bacteria
IXO792_17895	COG0203	ribosomal protein L17
IXO792_17905	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
IXO792_17910	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
IXO792_17920	COG0201	protein transport
IXO792_17930	COG1841	ribosomal large subunit assembly
IXO792_17940	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
IXO792_17960	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
IXO792_17970	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
IXO792_17975	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
IXO792_17980	COG0255	Belongs to the universal ribosomal protein uL29 family
IXO792_17985	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
IXO792_17995	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
IXO792_18010	COG0089	rRNA binding
IXO792_18015	COG0088	Forms part of the polypeptide exit tunnel
IXO792_18020	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
IXO792_18025	COG0051	transcription antitermination factor activity, RNA binding
IXO792_18045	COG0049	tRNA binding
IXO792_18050	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
IXO792_18055	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
IXO792_18060	COG0085	RNA polymerase activity
IXO792_18065	COG0222	ribosome binding
IXO792_18070	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
IXO792_18080	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
IXO792_18085	COG0250	Participates in transcription elongation, termination and antitermination
IXO792_18090	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
IXO792_18120	COG0012	GTP binding
IXO792_18125	COG0193	aminoacyl-tRNA hydrolase activity
IXO792_18135	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
IXO792_18150	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
IXO792_18160	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
IXO792_18165	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
IXO792_18180	COG0521	Mo-molybdopterin cofactor biosynthetic process
IXO792_18200	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
IXO792_18205	COG1295	ribonuclease BN
IXO792_18235	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
IXO792_18240	COG1404	Belongs to the peptidase S8 family
IXO792_18255	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
IXO792_18280	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
IXO792_18305	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
IXO792_18320	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
IXO792_18320	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
IXO792_18370	COG2890	protein-(glutamine-N5) methyltransferase activity
IXO792_18380	COG3634	alkyl hydroperoxide reductase activity
IXO792_18385	COG0583	DNA-binding transcription factor activity
IXO792_18395	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
IXO792_18420	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
IXO792_18455	COG0584	glycerophosphoryl diester phosphodiesterase
IXO792_18475	COG3039	Transposase
IXO792_18490	COG0625	glutathione transferase activity
IXO792_18495	COG0039	L-malate dehydrogenase activity
IXO792_18500	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
IXO792_18505	COG1217	gtp-binding protein TYPA
IXO792_18525	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
IXO792_18660	COG3781	membrane
IXO792_18670	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
IXO792_18700	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
IXO792_18720	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
IXO792_18745	COG3710	Transcriptional regulator
IXO792_18750	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
IXO792_18760	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
IXO792_18790	COG2226	methyltransferase
IXO792_18795	COG0066	3-isopropylmalate dehydratase activity
IXO792_18800	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
IXO792_18830	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
IXO792_18835	COG1538	Outer membrane efflux protein
IXO792_18840	COG1519	Transferase
IXO792_18845	COG1560	Kdo2-lipid A biosynthetic process
IXO792_18900	COG0308	aminopeptidase N
IXO792_18905	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
IXO792_18915	COG0330	HflC and HflK could
IXO792_18920	COG0330	HflC and HflK could
IXO792_18940	COG0678	peroxiredoxin activity
IXO792_18950	COG2826	transposase and inactivated derivatives, IS30 family
IXO792_18980	COG3039	Transposase
IXO792_19010	COG3829	transcription factor binding
IXO792_19045	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
IXO792_19050	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
IXO792_19060	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
IXO792_19065	COG1028	Short-chain dehydrogenase reductase Sdr
IXO792_19090	COG1399	metal-binding, possibly nucleic acid-binding protein
IXO792_19110	COG3039	Transposase
IXO792_19150	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
IXO792_19195	COG2188	Transcriptional regulator
IXO792_19210	COG1450	Type ii and iii secretion system protein
IXO792_19225	COG3166	PFAM Fimbrial assembly family protein
IXO792_19230	COG3156	type II secretion system protein K
IXO792_19235	COG4795	General secretion pathway protein
IXO792_19240	COG2165	general secretion pathway protein
IXO792_19245	COG4970	Tfp pilus assembly protein FimT
IXO792_19250	COG2165	general secretion pathway protein
IXO792_19255	COG1459	type II secretion system
IXO792_19265	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
IXO792_19275	COG5295	Hep Hag repeat protein
IXO792_19280	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
IXO792_19280	COG0047	phosphoribosylformylglycinamidine synthase activity
IXO792_19285	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
IXO792_19290	COG4974	Belongs to the 'phage' integrase family
IXO792_19300	COG0795	lipopolysaccharide-transporting ATPase activity
IXO792_19310	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
IXO792_19325	COG0525	valine-tRNA ligase activity
IXO792_19360	COG3039	Transposase
IXO792_19395	COG3039	Transposase
IXO792_19425	COG1183	phosphatidylcholine synthase activity
IXO792_19435	COG0442	prolyl-tRNA aminoacylation
IXO792_19450	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
IXO792_19455	COG1127	ABC transporter
IXO792_19460	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
IXO792_19460	COG3218	ABC-type transport auxiliary lipoprotein component
IXO792_19495	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
IXO792_19500	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
IXO792_19500	COG0662	Cupin 2, conserved barrel domain protein
IXO792_19525	COG2086	electron transfer activity
IXO792_19550	COG3328	transposase activity
IXO792_19590	COG0626	cystathionine gamma-synthase activity
IXO792_19620	COG0625	glutathione transferase activity
IXO792_19635	COG0513	Belongs to the DEAD box helicase family
IXO792_19640	COG0720	synthase
IXO792_19650	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
IXO792_19655	COG1956	GAF domain-containing protein
IXO792_19695	COG0339	signal peptide processing
IXO792_19745	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
IXO792_19750	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IXO792_19800	COG0355	proton-transporting ATP synthase activity, rotational mechanism
IXO792_19805	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
IXO792_19810	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
IXO792_19815	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
IXO792_19825	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
IXO792_19835	COG0356	it plays a direct role in the translocation of protons across the membrane
IXO792_19855	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
IXO792_19865	COG0508	dehydrogenase complex catalyzes the overall conversion of
IXO792_19895	COG2011	ABC-type metal ion transport system permease component
IXO792_19905	COG0697	spore germination
IXO792_19940	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
IXO792_19945	COG1187	pseudouridine synthase activity
IXO792_19950	COG2813	Specifically methylates the guanine in position
IXO792_19980	COG2202	Pas domain
IXO792_19980	COG2205	protein histidine kinase activity
IXO792_20005	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
IXO792_20055	COG0745	RESPONSE REGULATOR receiver
IXO792_20070	COG1404	Belongs to the peptidase S8 family
IXO792_20085	COG0842	Transport permease protein
IXO792_20090	COG1131	(ABC) transporter
IXO792_20095	COG0025	NhaP-type Na H and K H
IXO792_20105	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
IXO792_20115	COG1573	uracil-dna glycosylase
IXO792_20125	COG3384	dioxygenase
IXO792_20140	COG0667	Aldo Keto reductase
IXO792_20150	COG3590	peptidase
IXO792_20170	COG0531	amino acid
IXO792_20195	COG2972	Histidine kinase
IXO792_20245	COG1271	oxidase subunit
IXO792_20390	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
IXO792_20400	COG1560	Kdo2-lipid A biosynthetic process
IXO792_20450	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
IXO792_20450	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
IXO792_20455	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
IXO792_20460	COG0242	peptide deformylase activity
IXO792_20465	COG1652	LysM domain
IXO792_20470	COG0758	DNA mediated transformation
IXO792_20475	COG2922	Belongs to the Smg family
IXO792_20490	COG1754	DNA topoisomerase type I activity
IXO792_20490	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
IXO792_20495	COG0009	L-threonylcarbamoyladenylate synthase
IXO792_20510	COG1028	Short-chain dehydrogenase reductase Sdr
IXO792_20520	COG0616	signal peptide processing
IXO792_20525	COG0534	Mate efflux family protein
IXO792_20545	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
IXO792_20580	COG1324	tolerance protein
IXO792_20590	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
IXO792_20595	COG0511	ligase activity, forming carbon-carbon bonds
IXO792_20605	COG0439	Biotin carboxylase
IXO792_20650	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
IXO792_20710	COG3039	Transposase
IXO792_20735	COG3039	Transposase
IXO792_20820	COG3210	domain, Protein
IXO792_20825	COG2831	hemolysin activation secretion protein
IXO792_20855	COG2267	carboxylic ester hydrolase activity
IXO792_20860	COG2267	carboxylic ester hydrolase activity
IXO792_20865	COG2267	carboxylic ester hydrolase activity
IXO792_20875	COG0138	bifunctional purine biosynthesis protein purh
IXO792_20885	COG0151	Belongs to the GarS family
IXO792_20910	COG1289	transmembrane transporter activity
IXO792_20925	COG2814	Major facilitator Superfamily
IXO792_20940	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
IXO792_20975	COG0745	RESPONSE REGULATOR receiver
IXO792_21020	COG0739	heme binding
IXO792_21040	COG2211	Major facilitator Superfamily
IXO792_21045	COG0708	Exodeoxyribonuclease III
IXO792_21060	COG1192	Involved in chromosome partitioning
IXO792_21065	COG1475	DNA binding
IXO792_21080	COG0463	Glycosyl transferase, family 2
IXO792_21105	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
IXO792_21115	COG0018	arginyl-trna synthetase
IXO792_21130	COG4221	oxidoreductase activity
IXO792_21155	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
IXO792_21160	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
IXO792_21175	COG3485	protocatechuate 3,4-dioxygenase
IXO792_21180	COG3485	protocatechuate 3,4-dioxygenase
IXO792_21215	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
IXO792_21220	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
IXO792_21230	COG1042	CoA-binding domain protein
IXO792_21230	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
IXO792_21230	COG0045	succinate-CoA ligase (ADP-forming) activity
IXO792_21245	COG2239	Acts as a magnesium transporter
IXO792_21260	COG3039	Transposase
IXO792_21270	COG3328	transposase activity
IXO792_21275	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
IXO792_21275	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
IXO792_21285	COG1473	amidohydrolase
IXO792_21290	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IXO792_21295	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
IXO792_21310	COG5383	Protein conserved in bacteria
IXO792_21340	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
IXO792_21345	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
IXO792_21360	COG0028	Belongs to the TPP enzyme family
IXO792_21365	COG4191	Histidine kinase
IXO792_21390	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
IXO792_21405	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
IXO792_21410	COG3177	Filamentation induced by cAMP protein fic
IXO792_21425	COG0596	Alpha beta hydrolase
IXO792_21430	COG0727	PFAM Uncharacterised protein family (UPF0153)
IXO792_21435	COG0318	PFAM AMP-dependent synthetase and ligase
IXO792_21440	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
IXO792_21490	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
IXO792_21500	COG0129	dihydroxy-acid dehydratase activity
IXO792_21525	COG3039	Transposase
IXO792_21535	COG0408	coproporphyrinogen oxidase activity
IXO792_21575	COG0232	Belongs to the dGTPase family. Type 2 subfamily
IXO792_21635	COG2353	YceI-like domain
IXO792_21665	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
IXO792_21680	COG3386	PFAM SMP-30 Gluconolaconase
IXO792_21725	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
IXO792_21745	COG0459	protein refolding
IXO792_21770	COG1252	NADH dehydrogenase
IXO792_21780	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
IXO792_21785	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
IXO792_21790	COG3437	response regulator, receiver
IXO792_21795	COG2177	Part of the ABC transporter FtsEX involved in
IXO792_21800	COG2884	Cell division ATP-binding protein ftsE
IXO792_21810	COG3118	belongs to the thioredoxin family
IXO792_21815	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
IXO792_21830	COG0729	surface antigen
IXO792_21835	COG2911	Protein conserved in bacteria
IXO792_21870	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
IXO792_21885	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
IXO792_21935	COG1733	regulation of RNA biosynthetic process
IXO792_21940	COG0702	epimerase
IXO792_21970	COG0583	DNA-binding transcription factor activity
IXO792_21975	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
IXO792_21995	COG0745	RESPONSE REGULATOR receiver
IXO792_22025	COG1902	pentaerythritol trinitrate reductase activity
IXO792_22030	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
IXO792_22040	COG2814	Major facilitator Superfamily
IXO792_22045	COG0583	DNA-binding transcription factor activity
IXO792_22060	COG0084	hydrolase, TatD family'
IXO792_22105	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
IXO792_22125	COG2072	flavoprotein involved in K transport
IXO792_22180	COG4770	biotin carboxylase activity
IXO792_22185	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
IXO792_22190	COG1960	acyl-CoA dehydrogenase activity
IXO792_22245	COG0523	cobalamin synthesis protein
IXO792_22255	COG0697	spore germination
IXO792_22265	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
IXO792_22280	COG4771	TonB-dependent receptor
IXO792_22285	COG0457	Tetratricopeptide repeat
IXO792_22295	COG0752	glycyl-tRNA synthetase alpha subunit
IXO792_22300	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
IXO792_22315	COG0519	Catalyzes the synthesis of GMP from XMP
IXO792_22315	COG0518	GMP synthase (glutamine-hydrolyzing) activity
IXO792_22325	COG0805	protein transport
IXO792_22335	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
IXO792_22345	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
IXO792_22370	COG2974	May be involved in recombination
IXO792_22375	COG0037	tRNA processing
IXO792_22390	COG3661	Belongs to the glycosyl hydrolase 67 family
IXO792_22400	COG4948	Mandelate Racemase Muconate Lactonizing
IXO792_22410	COG1472	Belongs to the glycosyl hydrolase 3 family
IXO792_22415	COG0246	Mannitol dehydrogenase
IXO792_22440	COG3693	PFAM glycoside hydrolase, family 10
IXO792_22460	COG2211	Major facilitator Superfamily
IXO792_22510	COG4943	cyclic-guanylate-specific phosphodiesterase activity
IXO792_22550	COG1846	Transcriptional regulator
IXO792_22555	COG1764	response to oxidative stress
IXO792_22635	COG3549	Plasmid maintenance system killer
IXO792_22645	COG1074	ATP-dependent DNA helicase activity
IXO792_22650	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
IXO792_22695	COG2032	superoxide dismutase activity
IXO792_22700	COG2032	superoxide dismutase activity
IXO792_22705	COG2204	response regulator
IXO792_22710	COG3852	Histidine kinase
IXO792_22715	COG0004	ammonium transporteR
IXO792_22720	COG0347	Belongs to the P(II) protein family
IXO792_22725	COG0174	glutamine synthetase
IXO792_22730	COG1968	undecaprenyl-diphosphatase activity
IXO792_22775	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
IXO792_22785	COG2062	phosphohistidine phosphatase, SixA
IXO792_22790	COG0489	protein tyrosine kinase activity
IXO792_22810	COG1396	sequence-specific DNA binding
IXO792_22815	COG3550	peptidyl-serine autophosphorylation
IXO792_22820	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
IXO792_22825	COG1262	PFAM Formylglycine-generating sulfatase enzyme
IXO792_22840	COG1125	glycine betaine transport
IXO792_22840	COG0517	IMP dehydrogenase activity
IXO792_22855	COG1119	ATPase activity
IXO792_22865	COG1752	Esterase of the alpha-beta hydrolase superfamily
IXO792_22880	COG3039	Transposase
IXO792_22905	COG0656	L-ascorbic acid biosynthetic process
IXO792_22910	COG2130	NADP-dependent
IXO792_22915	COG0667	Aldo Keto reductase
IXO792_22925	COG1187	pseudouridine synthase activity
IXO792_22935	COG1643	Atp-dependent helicase
IXO792_22940	COG4807	Protein conserved in bacteria
IXO792_22945	COG4948	Mandelate Racemase Muconate Lactonizing
IXO792_22950	COG0179	Fumarylacetoacetate (FAA) hydrolase
IXO792_22955	COG1028	Short-chain dehydrogenase reductase Sdr
IXO792_22975	COG3507	Belongs to the glycosyl hydrolase 43 family
IXO792_23015	COG3162	membrane
IXO792_23020	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
IXO792_23040	COG0708	Exodeoxyribonuclease III
IXO792_23055	COG2091	lysine biosynthetic process via aminoadipic acid
IXO792_23065	COG3540	Alkaline phosphatase
IXO792_23070	COG0357	Ribosomal RNA small subunit methyltransferase G
IXO792_23095	COG2159	amidohydrolase
IXO792_23105	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
IXO792_23110	COG0583	DNA-binding transcription factor activity
IXO792_23115	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
IXO792_23130	COG0210	DNA helicase
IXO792_23155	COG0531	amino acid
IXO792_23160	COG1322	Protein conserved in bacteria
IXO792_23170	COG0386	Belongs to the glutathione peroxidase family
IXO792_23230	COG0793	Belongs to the peptidase S41A family
IXO792_23235	COG4942	peptidase
IXO792_23245	COG2234	aminopeptidase activity
IXO792_23290	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
IXO792_23295	COG0302	gtp cyclohydrolase
IXO792_23315	COG0477	Major facilitator Superfamily
IXO792_23420	COG3039	Transposase
IXO792_23430	COG1929	Belongs to the glycerate kinase type-1 family
IXO792_23435	COG2271	Major facilitator Superfamily
IXO792_23450	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
IXO792_23455	COG0861	Integral membrane protein TerC family
IXO792_23470	COG0584	glycerophosphoryl diester phosphodiesterase
IXO792_23480	COG0671	phosphoesterase, PA-phosphatase related
IXO792_23490	COG0726	polysaccharide deacetylase
IXO792_23495	COG0706	membrane insertase activity