BRM78_00025 SM00028 Tetratricopeptide repeats BRM78_00035 SM00014 Acid phosphatase homologues BRM78_00210 SM00347 helix_turn_helix multiple antibiotic resistance protein BRM78_00285 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRM78_00285 SM00245 tail specific protease BRM78_00320 SM00729 Elongator protein 3, MiaB family, Radical SAM BRM78_00365 SM01126 BRM78_00365 BRM78_00395 SM00155 Phospholipase D. Active site motifs. BRM78_00525 SM00421 helix_turn_helix, Lux Regulon BRM78_00525 SM00448 cheY-homologous receiver domain BRM78_00585 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BRM78_00595 SM00487 DEAD-like helicases superfamily BRM78_00595 SM00490 helicase superfamily c-terminal domain BRM78_00595 SM00847 Helicase associated domain (HA2) Add an annotation BRM78_00625 SM00829 Enoylreductase BRM78_00680 SM00382 ATPases associated with a variety of cellular activities BRM78_00695 SM00382 ATPases associated with a variety of cellular activities BRM78_00725 SM00530 Helix-turn-helix XRE-family like proteins BRM78_00750 SM00855 Phosphoglycerate mutase family BRM78_00755 SM00867 YceI-like domain BRM78_00760 SM00155 Phospholipase D. Active site motifs. BRM78_00770 SM00563 Phosphate acyltransferases BRM78_00785 SM00028 Tetratricopeptide repeats BRM78_00810 SM01230 BRM78_00810 BRM78_00815 SM00938 Nitrogen regulatory protein P-II BRM78_00825 SM00387 Histidine kinase-like ATPases BRM78_00825 SM00388 His Kinase A (phosphoacceptor) domain BRM78_00830 SM00382 ATPases associated with a variety of cellular activities BRM78_00830 SM00448 cheY-homologous receiver domain BRM78_00850 SM01126 BRM78_00850 BRM78_00900 SM00530 Helix-turn-helix XRE-family like proteins BRM78_00960 SM00530 Helix-turn-helix XRE-family like proteins BRM78_01000 SM00347 helix_turn_helix multiple antibiotic resistance protein BRM78_01050 SM00052 Putative diguanylate phosphodiesterase BRM78_01065 SM01126 BRM78_01065 BRM78_01120 SM00633 Glycosyl hydrolase family 10 BRM78_01150 SM00758 BRM78_01150 BRM78_01150 SM01217 BRM78_01150 BRM78_01160 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BRM78_01175 SM00354 helix_turn _helix lactose operon repressor BRM78_01280 SM00382 ATPases associated with a variety of cellular activities BRM78_01290 SM00836 DALR anticodon binding domain BRM78_01335 SM00833 Cobalamin synthesis protein cobW C-terminal domain BRM78_01400 SM00878 Biotin carboxylase C-terminal domain BRM78_01495 SM01126 BRM78_01495 BRM78_01590 SM00448 cheY-homologous receiver domain BRM78_01590 SM00862 Transcriptional regulatory protein, C terminal BRM78_01720 SM00563 Phosphate acyltransferases BRM78_01780 SM00357 Cold shock protein domain BRM78_01780 SM00382 ATPases associated with a variety of cellular activities BRM78_01780 SM00959 Rho termination factor, N-terminal domain BRM78_01790 SM00487 DEAD-like helicases superfamily BRM78_01790 SM00490 helicase superfamily c-terminal domain BRM78_01795 SM00382 ATPases associated with a variety of cellular activities BRM78_01805 SM00448 cheY-homologous receiver domain BRM78_01810 SM00986 Uracil DNA glycosylase superfamily BRM78_01810 SM00987 UreE urease accessory protein, C-terminal domain BRM78_01845 SM00883 Chaperonin 10 Kd subunit BRM78_01890 SM01126 BRM78_01890 BRM78_01955 SM00867 YceI-like domain BRM78_01975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRM78_01975 SM00331 Sigma factor PP2C-like phosphatases BRM78_02040 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BRM78_02040 SM00474 3'-5' exonuclease BRM78_02040 SM00475 5'-3' exonuclease BRM78_02040 SM00482 DNA polymerase A domain BRM78_02130 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRM78_02140 SM00347 helix_turn_helix multiple antibiotic resistance protein BRM78_02225 SM00382 ATPases associated with a variety of cellular activities BRM78_02225 SM00448 cheY-homologous receiver domain BRM78_02230 SM00387 Histidine kinase-like ATPases BRM78_02230 SM00388 His Kinase A (phosphoacceptor) domain BRM78_02255 SM00450 Rhodanese Homology Domain BRM78_02270 SM01126 BRM78_02270 BRM78_02280 SM01126 BRM78_02280 BRM78_02300 SM01150 BRM78_02300 BRM78_02440 SM00903 Flavin reductase like domain BRM78_02460 SM00100 Cyclic nucleotide-monophosphate binding domain BRM78_02460 SM00419 helix_turn_helix, cAMP Regulatory protein BRM78_02515 SM01126 BRM78_02515 BRM78_02615 SM00400 zinc finger BRM78_02615 SM00493 BRM78_02615 BRM78_02615 SM00766 DNA primase DnaG DnaB-binding BRM78_02650 SM00905 Dihydroneopterin aldolase BRM78_02655 SM01217 BRM78_02655 BRM78_02675 SM01126 BRM78_02675 BRM78_02750 SM01126 BRM78_02750 BRM78_02770 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BRM78_02780 SM00644 BRM78_02780 BRM78_02900 SM01126 BRM78_02900 BRM78_02935 SM00347 helix_turn_helix multiple antibiotic resistance protein BRM78_03035 SM00271 DnaJ molecular chaperone homology domain BRM78_03050 SM00046 Diacylglycerol kinase catalytic domain (presumed) BRM78_03145 SM00060 Fibronectin type 3 domain BRM78_03215 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRM78_03225 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRM78_03225 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BRM78_03225 SM00091 PAS domain BRM78_03225 SM00267 diguanylate cyclase BRM78_03240 SM00637 BRM78_03240 BRM78_03295 SM00448 cheY-homologous receiver domain BRM78_03295 SM00850 LytTr DNA-binding domain BRM78_03385 SM00382 ATPases associated with a variety of cellular activities BRM78_03385 SM01086 C-terminal, D2-small domain, of ClpB protein BRM78_03400 SM01263 BRM78_03400 BRM78_03405 SM00267 diguanylate cyclase BRM78_03455 SM00268 Actin BRM78_03510 SM01126 BRM78_03510 BRM78_03520 SM00257 Lysin motif BRM78_03550 SM00936 Penicillin-binding protein 5, C-terminal domain BRM78_03575 SM00729 Elongator protein 3, MiaB family, Radical SAM BRM78_03590 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRM78_03590 SM00245 tail specific protease BRM78_03635 SM01350 BRM78_03635 BRM78_03645 SM00749 bacterial OsmY and nodulation domain BRM78_03650 SM00387 Histidine kinase-like ATPases BRM78_03650 SM00388 His Kinase A (phosphoacceptor) domain BRM78_03655 SM00448 cheY-homologous receiver domain BRM78_03660 SM00387 Histidine kinase-like ATPases BRM78_03660 SM00388 His Kinase A (phosphoacceptor) domain BRM78_03660 SM00448 cheY-homologous receiver domain BRM78_03730 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRM78_03730 SM00866 BRM78_03730 BRM78_03740 SM00354 helix_turn _helix lactose operon repressor BRM78_03785 SM01126 BRM78_03785 BRM78_03825 SM01126 BRM78_03825 BRM78_03945 SM00387 Histidine kinase-like ATPases BRM78_03945 SM00388 His Kinase A (phosphoacceptor) domain BRM78_03985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRM78_03985 SM00387 Histidine kinase-like ATPases BRM78_03985 SM00388 His Kinase A (phosphoacceptor) domain BRM78_03990 SM00448 cheY-homologous receiver domain BRM78_03990 SM00862 Transcriptional regulatory protein, C terminal BRM78_04005 SM00829 Enoylreductase BRM78_04035 SM00382 ATPases associated with a variety of cellular activities BRM78_04145 SM00387 Histidine kinase-like ATPases BRM78_04145 SM00388 His Kinase A (phosphoacceptor) domain BRM78_04150 SM00448 cheY-homologous receiver domain BRM78_04150 SM00862 Transcriptional regulatory protein, C terminal BRM78_04255 SM00842 Cell division protein FtsA BRM78_04260 SM00864 Tubulin/FtsZ family, GTPase domain BRM78_04260 SM00865 Tubulin/FtsZ family, C-terminal domain BRM78_04280 SM00957 SecA DEAD-like domain BRM78_04280 SM00958 SecA preprotein cross-linking domain BRM78_04320 SM00829 Enoylreductase BRM78_04380 SM00996 S-adenosyl-L-homocysteine hydrolase BRM78_04380 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BRM78_04545 SM00382 ATPases associated with a variety of cellular activities BRM78_04555 SM00448 cheY-homologous receiver domain BRM78_04555 SM00862 Transcriptional regulatory protein, C terminal BRM78_04560 SM00387 Histidine kinase-like ATPases BRM78_04560 SM00388 His Kinase A (phosphoacceptor) domain BRM78_04635 SM00650 Ribosomal RNA adenine dimethylases BRM78_04695 SM01126 BRM78_04695 BRM78_04740 SM00347 helix_turn_helix multiple antibiotic resistance protein BRM78_04845 SM00448 cheY-homologous receiver domain BRM78_04850 SM00387 Histidine kinase-like ATPases BRM78_04850 SM00448 cheY-homologous receiver domain BRM78_04900 SM00829 Enoylreductase BRM78_04950 SM00382 ATPases associated with a variety of cellular activities BRM78_04960 SM00829 Enoylreductase BRM78_04985 SM00855 Phosphoglycerate mutase family BRM78_05040 SM00014 Acid phosphatase homologues BRM78_05060 SM00387 Histidine kinase-like ATPases BRM78_05060 SM00388 His Kinase A (phosphoacceptor) domain BRM78_05065 SM00448 cheY-homologous receiver domain BRM78_05065 SM00862 Transcriptional regulatory protein, C terminal BRM78_05135 SM01126 BRM78_05135 BRM78_05220 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BRM78_05220 SM00475 5'-3' exonuclease BRM78_05235 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BRM78_05235 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BRM78_05355 SM00852 Probable molybdopterin binding domain BRM78_05360 SM00028 Tetratricopeptide repeats BRM78_05365 SM00937 BRM78_05365 BRM78_05375 SM00028 Tetratricopeptide repeats BRM78_05395 SM01400 BRM78_05395 BRM78_05445 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BRM78_05445 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BRM78_05455 SM00649 Ribosomal protein L11/L12 BRM78_05480 SM00663 RNA polymerase I subunit A N-terminus BRM78_05495 SM00838 Elongation factor G C-terminus BRM78_05495 SM00889 Elongation factor G, domain IV BRM78_05510 SM01403 BRM78_05510 BRM78_05530 SM01382 BRM78_05530 BRM78_05530 SM01383 BRM78_05530 BRM78_05545 SM00322 K homology RNA-binding domain BRM78_05565 SM01374 BRM78_05565 BRM78_05570 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BRM78_05630 SM00363 S4 RNA-binding domain BRM78_05630 SM01390 BRM78_05630 BRM78_05635 SM00662 RNA polymerases D BRM78_05680 SM00990 BRM78_05680 BRM78_05715 SM00382 ATPases associated with a variety of cellular activities BRM78_05750 SM00448 cheY-homologous receiver domain BRM78_05750 SM00862 Transcriptional regulatory protein, C terminal BRM78_05755 SM00387 Histidine kinase-like ATPases BRM78_05755 SM00388 His Kinase A (phosphoacceptor) domain BRM78_05795 SM00421 helix_turn_helix, Lux Regulon BRM78_05795 SM00448 cheY-homologous receiver domain BRM78_05810 SM00478 endonuclease III BRM78_06050 SM00382 ATPases associated with a variety of cellular activities BRM78_06050 SM01086 C-terminal, D2-small domain, of ClpB protein BRM78_06180 SM00487 DEAD-like helicases superfamily BRM78_06180 SM00490 helicase superfamily c-terminal domain BRM78_06255 SM00487 DEAD-like helicases superfamily BRM78_06265 SM00220 Serine/Threonine protein kinases, catalytic domain BRM78_06290 SM00855 Phosphoglycerate mutase family BRM78_06315 SM00966 SpoVT / AbrB like domain BRM78_06340 SM00481 DNA polymerase alpha chain like domain BRM78_06350 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRM78_06420 SM00091 PAS domain BRM78_06420 SM00342 helix_turn_helix, arabinose operon control protein BRM78_06465 SM01060 BRM78_06465 BRM78_06520 SM00506 Appr-1"-p processing enzyme BRM78_06565 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRM78_06565 SM00387 Histidine kinase-like ATPases BRM78_06635 SM01126 BRM78_06635 BRM78_06655 SM00967 RNA 2'-O ribose methyltransferase substrate binding BRM78_06740 SM00869 Autotransporter beta-domain BRM78_06785 SM00528 Domain in histone-like proteins of HNS family BRM78_06810 SM01126 BRM78_06810 BRM78_06830 SM00642 Alpha-amylase domain BRM78_06840 SM01126 BRM78_06840 BRM78_06895 SM01126 BRM78_06895 BRM78_06995 SM00316 Ribosomal protein S1-like RNA-binding domain BRM78_07055 SM00977 TilS substrate C-terminal domain BRM78_07060 SM00098 Alkaline phosphatase homologues BRM78_07110 SM01126 BRM78_07110 BRM78_07125 SM01160 BRM78_07125 BRM78_07175 SM00729 Elongator protein 3, MiaB family, Radical SAM BRM78_07215 SM00257 Lysin motif BRM78_07250 SM00859 Semialdehyde dehydrogenase, NAD binding domain BRM78_07320 SM00052 Putative diguanylate phosphodiesterase BRM78_07320 SM00267 diguanylate cyclase BRM78_07320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRM78_07350 SM00822 BRM78_07350 BRM78_07395 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BRM78_07400 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BRM78_07450 SM00316 Ribosomal protein S1-like RNA-binding domain BRM78_07450 SM00322 K homology RNA-binding domain BRM78_07470 SM01387 BRM78_07470 BRM78_07475 SM00316 Ribosomal protein S1-like RNA-binding domain BRM78_07475 SM00322 K homology RNA-binding domain BRM78_07495 SM01001 AIR carboxylase BRM78_07580 SM00487 DEAD-like helicases superfamily BRM78_07580 SM00490 helicase superfamily c-terminal domain BRM78_07610 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BRM78_07635 SM00873 B3/4 domain BRM78_07635 SM00874 tRNA synthetase B5 domain BRM78_07635 SM00896 Ferredoxin-fold anticodon binding domain BRM78_07640 SM00411 bacterial (prokaryotic) histone like domain BRM78_07645 SM00422 helix_turn_helix, mercury resistance BRM78_07830 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BRM78_07830 SM00091 PAS domain BRM78_07830 SM00387 Histidine kinase-like ATPases BRM78_07830 SM00388 His Kinase A (phosphoacceptor) domain BRM78_07830 SM00448 cheY-homologous receiver domain BRM78_07840 SM00478 endonuclease III BRM78_07855 SM00382 ATPases associated with a variety of cellular activities BRM78_07855 SM00962 SRP54-type protein, GTPase domain BRM78_07855 SM00963 SRP54-type protein, helical bundle domain BRM78_07860 SM00342 helix_turn_helix, arabinose operon control protein BRM78_07885 SM01130 BRM78_07885 BRM78_07950 SM00944 Pro-kumamolisin, activation domain BRM78_08060 SM00852 Probable molybdopterin binding domain BRM78_08105 SM01126 BRM78_08105 BRM78_08115 SM01126 BRM78_08115 BRM78_08165 SM00984 UDP binding domain BRM78_08190 SM00450 Rhodanese Homology Domain BRM78_08195 SM00421 helix_turn_helix, Lux Regulon BRM78_08195 SM00448 cheY-homologous receiver domain BRM78_08210 SM00316 Ribosomal protein S1-like RNA-binding domain BRM78_08215 SM00363 S4 RNA-binding domain BRM78_08365 SM00382 ATPases associated with a variety of cellular activities BRM78_08365 SM01086 C-terminal, D2-small domain, of ClpB protein BRM78_08400 SM00240 Forkhead associated domain BRM78_08425 SM00331 Sigma factor PP2C-like phosphatases BRM78_08425 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BRM78_08455 SM00387 Histidine kinase-like ATPases BRM78_08465 SM00448 cheY-homologous receiver domain BRM78_08465 SM00862 Transcriptional regulatory protein, C terminal BRM78_08735 SM00729 Elongator protein 3, MiaB family, Radical SAM BRM78_08745 SM00382 ATPases associated with a variety of cellular activities BRM78_08790 SM01091 Transporter associated domain BRM78_08825 SM00387 Histidine kinase-like ATPases BRM78_08825 SM00433 TopoisomeraseII BRM78_08850 SM01192 BRM78_08850 BRM78_08850 SM01193 BRM78_08850 BRM78_08885 SM00463 Small MutS-related domain BRM78_08905 SM00257 Lysin motif BRM78_08915 SM01103 BRM78_08915 BRM78_08925 SM00382 ATPases associated with a variety of cellular activities BRM78_08965 SM00382 ATPases associated with a variety of cellular activities BRM78_08980 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BRM78_09080 SM00670 Large family of predicted nucleotide-binding domains BRM78_09100 SM01130 BRM78_09100 BRM78_09125 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BRM78_09145 SM00758 BRM78_09145 BRM78_09185 SM00841 Elongation factor P, C-terminal BRM78_09185 SM01185 BRM78_09185 BRM78_09190 SM00822 BRM78_09190 BRM78_09210 SM00899 BRM78_09210 BRM78_09255 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BRM78_09265 SM00851 MGS-like domain BRM78_09265 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BRM78_09295 SM01126 BRM78_09295 BRM78_09330 SM00850 LytTr DNA-binding domain BRM78_09345 SM00448 cheY-homologous receiver domain BRM78_09345 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRM78_09355 SM00073 Histidine Phosphotransfer domain BRM78_09355 SM00387 Histidine kinase-like ATPases BRM78_09355 SM00388 His Kinase A (phosphoacceptor) domain BRM78_09355 SM00448 cheY-homologous receiver domain BRM78_09380 SM00966 SpoVT / AbrB like domain BRM78_09410 SM00052 Putative diguanylate phosphodiesterase BRM78_09410 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRM78_09410 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BRM78_09410 SM00091 PAS domain BRM78_09410 SM00267 diguanylate cyclase BRM78_09415 SM00448 cheY-homologous receiver domain BRM78_09425 SM00138 Methyltransferase, chemotaxis proteins BRM78_09430 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRM78_09430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRM78_09455 SM00260 Two component signalling adaptor domain BRM78_09475 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRM78_09475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRM78_09480 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRM78_09480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRM78_09485 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRM78_09485 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRM78_09490 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRM78_09490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRM78_09500 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRM78_09500 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRM78_09505 SM01126 BRM78_09505 BRM78_09510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRM78_09525 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRM78_09545 SM00073 Histidine Phosphotransfer domain BRM78_09545 SM00260 Two component signalling adaptor domain BRM78_09545 SM00387 Histidine kinase-like ATPases BRM78_09545 SM01231 BRM78_09545 BRM78_09550 SM00448 cheY-homologous receiver domain BRM78_09560 SM00260 Two component signalling adaptor domain BRM78_09785 SM00354 helix_turn _helix lactose operon repressor BRM78_09795 SM01126 BRM78_09795 BRM78_09835 SM00448 cheY-homologous receiver domain BRM78_09835 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRM78_09840 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BRM78_09840 SM00091 PAS domain BRM78_09840 SM00387 Histidine kinase-like ATPases BRM78_09840 SM00388 His Kinase A (phosphoacceptor) domain BRM78_09840 SM00448 cheY-homologous receiver domain BRM78_09840 SM01079 BRM78_09840 BRM78_09905 SM00267 diguanylate cyclase BRM78_09905 SM00448 cheY-homologous receiver domain BRM78_09915 SM01230 BRM78_09915 BRM78_09925 SM01230 BRM78_09925 BRM78_09955 SM00382 ATPases associated with a variety of cellular activities BRM78_09990 SM00116 Domain in cystathionine beta-synthase and other proteins. BRM78_09990 SM01091 Transporter associated domain BRM78_10015 SM00729 Elongator protein 3, MiaB family, Radical SAM BRM78_10100 SM01126 BRM78_10100 BRM78_10160 SM00528 Domain in histone-like proteins of HNS family BRM78_10180 SM00474 3'-5' exonuclease BRM78_10235 SM00646 BRM78_10235 BRM78_10240 SM00853 MutL C terminal dimerisation domain BRM78_10240 SM01340 BRM78_10240 BRM78_10265 SM00822 BRM78_10265 BRM78_10280 SM00052 Putative diguanylate phosphodiesterase BRM78_10280 SM00267 diguanylate cyclase BRM78_10290 SM01322 BRM78_10290 BRM78_10300 SM00357 Cold shock protein domain BRM78_10325 SM00487 DEAD-like helicases superfamily BRM78_10325 SM00490 helicase superfamily c-terminal domain BRM78_10330 SM00382 ATPases associated with a variety of cellular activities BRM78_10375 SM00052 Putative diguanylate phosphodiesterase BRM78_10375 SM00267 diguanylate cyclase BRM78_10375 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRM78_10385 SM00841 Elongation factor P, C-terminal BRM78_10385 SM01185 BRM78_10385 BRM78_10490 SM01234 BRM78_10490 BRM78_10500 SM00245 tail specific protease BRM78_10515 SM00840 BRM78_10515 BRM78_10555 SM00859 Semialdehyde dehydrogenase, NAD binding domain BRM78_10575 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BRM78_10585 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BRM78_10610 SM01126 BRM78_10610 BRM78_10635 SM00382 ATPases associated with a variety of cellular activities BRM78_10640 SM00382 ATPases associated with a variety of cellular activities BRM78_10650 SM01126 BRM78_10650 BRM78_10780 SM00073 Histidine Phosphotransfer domain BRM78_10780 SM00260 Two component signalling adaptor domain BRM78_10780 SM00387 Histidine kinase-like ATPases BRM78_10780 SM01231 BRM78_10780 BRM78_10790 SM00448 cheY-homologous receiver domain BRM78_10805 SM00382 ATPases associated with a variety of cellular activities BRM78_10805 SM00962 SRP54-type protein, GTPase domain BRM78_10820 SM00052 Putative diguanylate phosphodiesterase BRM78_10820 SM00267 diguanylate cyclase BRM78_10825 SM00267 diguanylate cyclase BRM78_10830 SM00267 diguanylate cyclase BRM78_10885 SM00382 ATPases associated with a variety of cellular activities BRM78_10940 SM00822 BRM78_10940 BRM78_10945 SM00822 BRM78_10945 BRM78_10965 SM00382 ATPases associated with a variety of cellular activities BRM78_10970 SM00448 cheY-homologous receiver domain BRM78_10980 SM00421 helix_turn_helix, Lux Regulon BRM78_10980 SM00448 cheY-homologous receiver domain BRM78_11020 SM00047 Lysozyme subfamily 2 BRM78_11070 SM00260 Two component signalling adaptor domain BRM78_11070 SM00448 cheY-homologous receiver domain BRM78_11075 SM00858 BRM78_11075 BRM78_11090 SM00387 Histidine kinase-like ATPases BRM78_11095 SM00052 Putative diguanylate phosphodiesterase BRM78_11095 SM00267 diguanylate cyclase BRM78_11095 SM00448 cheY-homologous receiver domain BRM78_11100 SM00091 PAS domain BRM78_11100 SM00387 Histidine kinase-like ATPases BRM78_11105 SM00052 Putative diguanylate phosphodiesterase BRM78_11105 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BRM78_11105 SM00091 PAS domain BRM78_11105 SM00267 diguanylate cyclase BRM78_11120 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRM78_11145 SM00382 ATPases associated with a variety of cellular activities BRM78_11145 SM01086 C-terminal, D2-small domain, of ClpB protein BRM78_11150 SM00316 Ribosomal protein S1-like RNA-binding domain BRM78_11175 SM00382 ATPases associated with a variety of cellular activities BRM78_11175 SM00843 BRM78_11175 BRM78_11200 SM00382 ATPases associated with a variety of cellular activities BRM78_11240 SM00562 BRM78_11240 BRM78_11250 SM00028 Tetratricopeptide repeats BRM78_11265 SM00564 beta-propeller repeat BRM78_11270 SM00382 ATPases associated with a variety of cellular activities BRM78_11275 SM00852 Probable molybdopterin binding domain BRM78_11335 SM01126 BRM78_11335 BRM78_11345 SM00450 Rhodanese Homology Domain BRM78_11360 SM00387 Histidine kinase-like ATPases BRM78_11465 SM00344 helix_turn_helix ASNC type BRM78_11485 SM01323 BRM78_11485 BRM78_11545 SM00479 BRM78_11545 BRM78_11560 SM00382 ATPases associated with a variety of cellular activities BRM78_11620 SM00947 Carbonic anhydrase BRM78_11630 SM00478 endonuclease III BRM78_11655 SM00450 Rhodanese Homology Domain BRM78_11665 SM00644 BRM78_11665 BRM78_11695 SM00981 BRM78_11695 BRM78_11730 SM00479 BRM78_11730 BRM78_11755 SM00947 Carbonic anhydrase BRM78_11810 SM00968 SMC proteins Flexible Hinge Domain BRM78_11815 SM00771 ZipA, C-terminal domain (FtsZ-binding) BRM78_11825 SM00292 breast cancer carboxy-terminal domain BRM78_11825 SM00532 Ligase N family BRM78_11850 SM00434 DNA Topoisomerase IV BRM78_11895 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRM78_11895 SM00866 BRM78_11895 BRM78_11915 SM00240 Forkhead associated domain BRM78_11940 SM00830 Chorismate mutase type II BRM78_11980 SM00869 Autotransporter beta-domain BRM78_11985 SM00421 helix_turn_helix, Lux Regulon BRM78_11985 SM00448 cheY-homologous receiver domain BRM78_11990 SM00387 Histidine kinase-like ATPases BRM78_11990 SM00388 His Kinase A (phosphoacceptor) domain BRM78_12015 SM00869 Autotransporter beta-domain BRM78_12035 SM00646 BRM78_12035 BRM78_12120 SM00052 Putative diguanylate phosphodiesterase BRM78_12120 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRM78_12120 SM00267 diguanylate cyclase BRM78_12135 SM01217 BRM78_12135 BRM78_12140 SM00631 BRM78_12140 BRM78_12170 SM00347 helix_turn_helix multiple antibiotic resistance protein BRM78_12220 SM00382 ATPases associated with a variety of cellular activities BRM78_12260 SM00267 diguanylate cyclase BRM78_12290 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRM78_12290 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BRM78_12290 SM00091 PAS domain BRM78_12290 SM00387 Histidine kinase-like ATPases BRM78_12290 SM00388 His Kinase A (phosphoacceptor) domain BRM78_12290 SM00448 cheY-homologous receiver domain BRM78_12295 SM00448 cheY-homologous receiver domain BRM78_12345 SM00382 ATPases associated with a variety of cellular activities BRM78_12405 SM00382 ATPases associated with a variety of cellular activities BRM78_12420 SM01126 BRM78_12420 BRM78_12425 SM00849 Metallo-beta-lactamase superfamily BRM78_12440 SM00382 ATPases associated with a variety of cellular activities BRM78_12455 SM00226 Low molecular weight phosphatase family BRM78_12465 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BRM78_12465 SM00465 GIY-YIG type nucleases (URI domain) BRM78_12515 SM01126 BRM78_12515 BRM78_12690 SM01126 BRM78_12690 BRM78_12715 SM00967 RNA 2'-O ribose methyltransferase substrate binding BRM78_12735 SM00316 Ribosomal protein S1-like RNA-binding domain BRM78_12735 SM00357 Cold shock protein domain BRM78_12735 SM00955 BRM78_12735 BRM78_12770 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BRM78_12780 SM01018 B12 binding domain BRM78_12800 SM00354 helix_turn _helix lactose operon repressor BRM78_12820 SM00984 UDP binding domain BRM78_12840 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRM78_12845 SM00382 ATPases associated with a variety of cellular activities BRM78_12920 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRM78_12925 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BRM78_12935 SM00861 Transketolase, pyrimidine binding domain BRM78_12960 SM00382 ATPases associated with a variety of cellular activities BRM78_13010 SM00271 DnaJ molecular chaperone homology domain BRM78_13080 SM00507 HNH nucleases BRM78_13085 SM00861 Transketolase, pyrimidine binding domain BRM78_13145 SM00347 helix_turn_helix multiple antibiotic resistance protein BRM78_13155 SM00434 DNA Topoisomerase IV BRM78_13185 SM00710 Parallel beta-helix repeats BRM78_13185 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses BRM78_13190 SM01172 BRM78_13190 BRM78_13220 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRM78_13230 SM00972 Spore Coat Protein U domain BRM78_13245 SM00972 Spore Coat Protein U domain BRM78_13300 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRM78_13340 SM00481 DNA polymerase alpha chain like domain BRM78_13360 SM00382 ATPases associated with a variety of cellular activities BRM78_13750 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BRM78_13755 SM00869 Autotransporter beta-domain BRM78_13775 SM00267 diguanylate cyclase BRM78_13805 SM00487 DEAD-like helicases superfamily BRM78_13805 SM00490 helicase superfamily c-terminal domain BRM78_13825 SM00357 Cold shock protein domain BRM78_13870 SM01118 BRM78_13870 BRM78_13880 SM00448 cheY-homologous receiver domain BRM78_13895 SM00358 Double-stranded RNA binding motif BRM78_13895 SM00535 Ribonuclease III family BRM78_13910 SM00838 Elongation factor G C-terminus BRM78_13915 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRM78_13965 SM00530 Helix-turn-helix XRE-family like proteins BRM78_13990 SM00812 Alpha-L-fucosidase BRM78_14010 SM00387 Histidine kinase-like ATPases BRM78_14010 SM00388 His Kinase A (phosphoacceptor) domain BRM78_14010 SM00448 cheY-homologous receiver domain BRM78_14015 SM00387 Histidine kinase-like ATPases BRM78_14015 SM00388 His Kinase A (phosphoacceptor) domain BRM78_14015 SM00448 cheY-homologous receiver domain BRM78_14020 SM00387 Histidine kinase-like ATPases BRM78_14020 SM00388 His Kinase A (phosphoacceptor) domain BRM78_14020 SM00448 cheY-homologous receiver domain BRM78_14025 SM00867 YceI-like domain BRM78_14035 SM00867 YceI-like domain BRM78_14185 SM00244 prohibitin homologues BRM78_14235 SM00812 Alpha-L-fucosidase BRM78_14240 SM00636 BRM78_14240 BRM78_14260 SM00758 BRM78_14260 BRM78_14260 SM01217 BRM78_14260 BRM78_14265 SM00382 ATPases associated with a variety of cellular activities BRM78_14335 SM01149 BRM78_14335 BRM78_14395 SM00369 Leucine-rich repeats, typical (most populated) subfamily BRM78_14440 SM00260 Two component signalling adaptor domain BRM78_14450 SM00073 Histidine Phosphotransfer domain BRM78_14450 SM00260 Two component signalling adaptor domain BRM78_14450 SM00387 Histidine kinase-like ATPases BRM78_14450 SM00448 cheY-homologous receiver domain BRM78_14450 SM01231 BRM78_14450 BRM78_14455 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRM78_14460 SM00260 Two component signalling adaptor domain BRM78_14465 SM00448 cheY-homologous receiver domain BRM78_14470 SM00448 cheY-homologous receiver domain BRM78_14495 SM00491 BRM78_14495 BRM78_14520 SM00954 Region found in RelA / SpoT proteins BRM78_14575 SM00382 ATPases associated with a variety of cellular activities BRM78_14575 SM00487 DEAD-like helicases superfamily BRM78_14575 SM00490 helicase superfamily c-terminal domain BRM78_14575 SM00847 Helicase associated domain (HA2) Add an annotation BRM78_14590 SM00341 Helicase and RNase D C-terminal BRM78_14590 SM00487 DEAD-like helicases superfamily BRM78_14590 SM00490 helicase superfamily c-terminal domain BRM78_14590 SM00956 BRM78_14590 BRM78_14600 SM00448 cheY-homologous receiver domain BRM78_14725 SM00382 ATPases associated with a variety of cellular activities BRM78_14735 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BRM78_14770 SM00834 Putative regulatory protein BRM78_14800 SM00382 ATPases associated with a variety of cellular activities BRM78_14825 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BRM78_14825 SM00534 ATPase domain of DNA mismatch repair MUTS family BRM78_14870 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRM78_14915 SM00904 Riboflavin kinase BRM78_15090 SM00881 CoA binding domain BRM78_15100 SM00387 Histidine kinase-like ATPases BRM78_15100 SM00388 His Kinase A (phosphoacceptor) domain BRM78_15105 SM00382 ATPases associated with a variety of cellular activities BRM78_15105 SM00448 cheY-homologous receiver domain BRM78_15235 SM00382 ATPases associated with a variety of cellular activities BRM78_15265 SM00448 cheY-homologous receiver domain BRM78_15265 SM00862 Transcriptional regulatory protein, C terminal BRM78_15270 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRM78_15270 SM00387 Histidine kinase-like ATPases BRM78_15270 SM00388 His Kinase A (phosphoacceptor) domain BRM78_15310 SM00363 S4 RNA-binding domain BRM78_15315 SM00052 Putative diguanylate phosphodiesterase BRM78_15315 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BRM78_15315 SM00091 PAS domain BRM78_15315 SM00267 diguanylate cyclase BRM78_15320 SM00487 DEAD-like helicases superfamily BRM78_15320 SM00490 helicase superfamily c-terminal domain BRM78_15365 SM00342 helix_turn_helix, arabinose operon control protein BRM78_15365 SM00478 endonuclease III BRM78_15365 SM01009 AlkA N-terminal domain BRM78_15390 SM00829 Enoylreductase BRM78_15505 SM00357 Cold shock protein domain BRM78_15590 SM00645 Papain family cysteine protease BRM78_15610 SM00645 Papain family cysteine protease BRM78_15635 SM00645 Papain family cysteine protease BRM78_15645 SM00387 Histidine kinase-like ATPases BRM78_15645 SM00388 His Kinase A (phosphoacceptor) domain BRM78_15675 SM00487 DEAD-like helicases superfamily BRM78_15675 SM00490 helicase superfamily c-terminal domain BRM78_15675 SM00982 BRM78_15675 BRM78_15675 SM01058 CarD-like/TRCF domain BRM78_15685 SM00073 Histidine Phosphotransfer domain BRM78_15685 SM00260 Two component signalling adaptor domain BRM78_15685 SM00387 Histidine kinase-like ATPases BRM78_15685 SM01231 BRM78_15685 BRM78_15690 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRM78_15690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRM78_15695 SM00260 Two component signalling adaptor domain BRM78_15700 SM00052 Putative diguanylate phosphodiesterase BRM78_15700 SM00448 cheY-homologous receiver domain BRM78_15705 SM00138 Methyltransferase, chemotaxis proteins BRM78_15710 SM00448 cheY-homologous receiver domain BRM78_15735 SM00855 Phosphoglycerate mutase family BRM78_15900 SM01126 BRM78_15900 BRM78_15915 SM00267 diguanylate cyclase BRM78_15995 SM00732 Likely ribonuclease with RNase H fold. BRM78_16040 SM00382 ATPases associated with a variety of cellular activities BRM78_16065 SM00411 bacterial (prokaryotic) histone like domain BRM78_16105 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain BRM78_16120 SM00382 ATPases associated with a variety of cellular activities BRM78_16160 SM01126 BRM78_16160 BRM78_16200 SM01230 BRM78_16200 BRM78_16240 SM00342 helix_turn_helix, arabinose operon control protein BRM78_16245 SM00862 Transcriptional regulatory protein, C terminal BRM78_16285 SM00382 ATPases associated with a variety of cellular activities BRM78_16375 SM00855 Phosphoglycerate mutase family BRM78_16460 SM00382 ATPases associated with a variety of cellular activities BRM78_16460 SM01086 C-terminal, D2-small domain, of ClpB protein BRM78_16495 SM00363 S4 RNA-binding domain BRM78_16550 SM00382 ATPases associated with a variety of cellular activities BRM78_16550 SM00962 SRP54-type protein, GTPase domain BRM78_16550 SM00963 SRP54-type protein, helical bundle domain BRM78_16570 SM00813 Alpha-L-arabinofuranosidase C-terminus BRM78_16705 SM00116 Domain in cystathionine beta-synthase and other proteins. BRM78_16725 SM00382 ATPases associated with a variety of cellular activities BRM78_16775 SM00924 MgtE intracellular N domain BRM78_16825 SM00421 helix_turn_helix, Lux Regulon BRM78_16850 SM00849 Metallo-beta-lactamase superfamily BRM78_16860 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BRM78_16885 SM00422 helix_turn_helix, mercury resistance BRM78_17130 SM00448 cheY-homologous receiver domain BRM78_17130 SM00862 Transcriptional regulatory protein, C terminal BRM78_17135 SM00387 Histidine kinase-like ATPases BRM78_17135 SM00388 His Kinase A (phosphoacceptor) domain BRM78_17140 SM01126 BRM78_17140 BRM78_17155 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BRM78_17190 SM00849 Metallo-beta-lactamase superfamily BRM78_17205 SM00382 ATPases associated with a variety of cellular activities BRM78_17225 SM00387 Histidine kinase-like ATPases BRM78_17225 SM00388 His Kinase A (phosphoacceptor) domain BRM78_17230 SM00448 cheY-homologous receiver domain BRM78_17230 SM00862 Transcriptional regulatory protein, C terminal BRM78_17290 SM00861 Transketolase, pyrimidine binding domain BRM78_17315 SM00028 Tetratricopeptide repeats BRM78_17315 SM00327 von Willebrand factor (vWF) type A domain BRM78_17320 SM00327 von Willebrand factor (vWF) type A domain BRM78_17335 SM00382 ATPases associated with a variety of cellular activities BRM78_17360 SM00965 Secretin and TonB N terminus short domain BRM78_17410 SM00487 DEAD-like helicases superfamily BRM78_17410 SM00490 helicase superfamily c-terminal domain BRM78_17420 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRM78_17420 SM00954 Region found in RelA / SpoT proteins BRM78_17425 SM01409 BRM78_17425 BRM78_17440 SM00072 Guanylate kinase homologues. BRM78_17465 SM00729 Elongator protein 3, MiaB family, Radical SAM BRM78_17500 SM01011 Aminopeptidase P, N-terminal domain BRM78_17590 SM00919 Malic enzyme, NAD binding domain BRM78_17590 SM01274 BRM78_17590 BRM78_17610 SM00387 Histidine kinase-like ATPases BRM78_17610 SM00388 His Kinase A (phosphoacceptor) domain BRM78_17610 SM00448 cheY-homologous receiver domain BRM78_17645 SM00421 helix_turn_helix, Lux Regulon BRM78_17645 SM00448 cheY-homologous receiver domain BRM78_17655 SM00387 Histidine kinase-like ATPases BRM78_17655 SM00388 His Kinase A (phosphoacceptor) domain BRM78_17660 SM00448 cheY-homologous receiver domain BRM78_17660 SM00862 Transcriptional regulatory protein, C terminal BRM78_17680 SM00822 BRM78_17680 BRM78_17685 SM00354 helix_turn _helix lactose operon repressor BRM78_17705 SM00642 Alpha-amylase domain BRM78_17715 SM01154 BRM78_17715 BRM78_17750 SM00450 Rhodanese Homology Domain BRM78_17850 SM00382 ATPases associated with a variety of cellular activities BRM78_17860 SM00460 Transglutaminase/protease-like homologues BRM78_17875 SM00493 BRM78_17875 BRM78_17885 SM00382 ATPases associated with a variety of cellular activities BRM78_17920 SM00729 Elongator protein 3, MiaB family, Radical SAM BRM78_17925 SM00849 Metallo-beta-lactamase superfamily BRM78_17950 SM01126 BRM78_17950 BRM78_18030 SM00331 Sigma factor PP2C-like phosphatases BRM78_18030 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BRM78_18040 SM00479 BRM78_18040 BRM78_18055 SM00849 Metallo-beta-lactamase superfamily BRM78_18060 SM00257 Lysin motif BRM78_18085 SM00411 bacterial (prokaryotic) histone like domain BRM78_18090 SM00382 ATPases associated with a variety of cellular activities BRM78_18090 SM00464 Found in ATP-dependent protease La (LON) BRM78_18095 SM00382 ATPases associated with a variety of cellular activities BRM78_18095 SM00994 ClpX C4-type zinc finger BRM78_18095 SM01086 C-terminal, D2-small domain, of ClpB protein BRM78_18160 SM01329 BRM78_18160 BRM78_18165 SM01126 BRM78_18165 BRM78_18240 SM01126 BRM78_18240 BRM78_18365 SM00838 Elongation factor G C-terminus BRM78_18405 SM00464 Found in ATP-dependent protease La (LON) BRM78_18445 SM01126 BRM78_18445 BRM78_18480 SM00342 helix_turn_helix, arabinose operon control protein BRM78_18485 SM00862 Transcriptional regulatory protein, C terminal BRM78_18520 SM00917 LeuA allosteric (dimerisation) domain BRM78_18525 SM01329 BRM78_18525 BRM78_18635 SM00788 Adenylosuccinate synthetase BRM78_18645 SM00244 prohibitin homologues BRM78_18650 SM00244 prohibitin homologues BRM78_18655 SM00448 cheY-homologous receiver domain BRM78_18660 SM00271 DnaJ molecular chaperone homology domain BRM78_18775 SM00382 ATPases associated with a variety of cellular activities BRM78_18820 SM00825 Beta-ketoacyl synthase BRM78_18830 SM00822 BRM78_18830 BRM78_18835 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BRM78_18870 SM01126 BRM78_18870 BRM78_18875 SM00487 DEAD-like helicases superfamily BRM78_18960 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRM78_18960 SM00866 BRM78_18960 BRM78_19030 SM00382 ATPases associated with a variety of cellular activities BRM78_19060 SM01211 BRM78_19060 BRM78_19170 SM00656 BRM78_19170 BRM78_19230 SM00528 Domain in histone-like proteins of HNS family BRM78_19245 SM00382 ATPases associated with a variety of cellular activities BRM78_19280 SM00882 Coenzyme A transferase BRM78_19285 SM00882 Coenzyme A transferase BRM78_19320 SM00893 Electron transfer flavoprotein domain BRM78_19325 SM00893 Electron transfer flavoprotein domain BRM78_19335 SM00382 ATPases associated with a variety of cellular activities BRM78_19400 SM00116 Domain in cystathionine beta-synthase and other proteins. BRM78_19440 SM00487 DEAD-like helicases superfamily BRM78_19440 SM00490 helicase superfamily c-terminal domain BRM78_19465 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRM78_19495 SM00825 Beta-ketoacyl synthase BRM78_19590 SM01126 BRM78_19590 BRM78_19620 SM00830 Chorismate mutase type II BRM78_19630 SM00382 ATPases associated with a variety of cellular activities BRM78_19700 SM00986 Uracil DNA glycosylase superfamily BRM78_19700 SM00987 UreE urease accessory protein, C-terminal domain BRM78_19725 SM00382 ATPases associated with a variety of cellular activities BRM78_19725 SM00930 BRM78_19725 BRM78_19810 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BRM78_19810 SM00091 PAS domain BRM78_19810 SM00387 Histidine kinase-like ATPases BRM78_19810 SM00388 His Kinase A (phosphoacceptor) domain BRM78_19810 SM00448 cheY-homologous receiver domain BRM78_19830 SM01005 Alanine racemase, C-terminal domain BRM78_19840 SM00344 helix_turn_helix ASNC type BRM78_19885 SM00448 cheY-homologous receiver domain BRM78_19885 SM00862 Transcriptional regulatory protein, C terminal BRM78_19890 SM00387 Histidine kinase-like ATPases BRM78_19890 SM00388 His Kinase A (phosphoacceptor) domain BRM78_19920 SM00382 ATPases associated with a variety of cellular activities BRM78_19940 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. BRM78_19950 SM00986 Uracil DNA glycosylase superfamily BRM78_19950 SM00987 UreE urease accessory protein, C-terminal domain BRM78_19955 SM00729 Elongator protein 3, MiaB family, Radical SAM BRM78_20025 SM00387 Histidine kinase-like ATPases BRM78_20045 SM00448 cheY-homologous receiver domain BRM78_20055 SM00382 ATPases associated with a variety of cellular activities BRM78_20055 SM00448 cheY-homologous receiver domain BRM78_20145 SM00382 ATPases associated with a variety of cellular activities BRM78_20160 SM01126 BRM78_20160 BRM78_20305 SM00257 Lysin motif BRM78_20330 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BRM78_20330 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BRM78_20330 SM00493 BRM78_20330 BRM78_20390 SM00487 DEAD-like helicases superfamily BRM78_20390 SM00490 helicase superfamily c-terminal domain BRM78_20420 SM01126 BRM78_20420 BRM78_20460 SM00878 Biotin carboxylase C-terminal domain BRM78_20505 SM00530 Helix-turn-helix XRE-family like proteins BRM78_20560 SM00798 AICARFT/IMPCHase bienzyme BRM78_20560 SM00851 MGS-like domain BRM78_20575 SM01209 BRM78_20575 BRM78_20575 SM01210 BRM78_20575 BRM78_20605 SM00563 Phosphate acyltransferases BRM78_20665 SM00052 Putative diguanylate phosphodiesterase BRM78_20665 SM00267 diguanylate cyclase BRM78_20665 SM00448 cheY-homologous receiver domain BRM78_20670 SM00073 Histidine Phosphotransfer domain BRM78_20670 SM00387 Histidine kinase-like ATPases BRM78_20670 SM00388 His Kinase A (phosphoacceptor) domain BRM78_20670 SM00448 cheY-homologous receiver domain BRM78_20750 SM00470 ParB-like nuclease domain BRM78_20770 SM01259 BRM78_20770 BRM78_20800 SM00836 DALR anticodon binding domain BRM78_20800 SM01016 Arginyl tRNA synthetase N terminal dom BRM78_20825 SM00090 RIO-like kinase BRM78_20855 SM00998 Adenylosuccinate lyase C-terminus BRM78_20925 SM00881 CoA binding domain BRM78_20935 SM00116 Domain in cystathionine beta-synthase and other proteins. BRM78_20935 SM00924 MgtE intracellular N domain BRM78_20965 SM00226 Low molecular weight phosphatase family BRM78_20970 SM00248 ankyrin repeats BRM78_20980 SM00825 Beta-ketoacyl synthase BRM78_21005 SM00822 BRM78_21005 BRM78_21025 SM00729 Elongator protein 3, MiaB family, Radical SAM BRM78_21025 SM00876 Biotin and Thiamin Synthesis associated domain BRM78_21075 SM01060 BRM78_21075 BRM78_21120 SM00849 Metallo-beta-lactamase superfamily BRM78_21215 SM00387 Histidine kinase-like ATPases BRM78_21215 SM00388 His Kinase A (phosphoacceptor) domain BRM78_21220 SM00448 cheY-homologous receiver domain BRM78_21220 SM00862 Transcriptional regulatory protein, C terminal BRM78_21250 SM00248 ankyrin repeats BRM78_21255 SM01060 BRM78_21255 BRM78_21270 SM01126 BRM78_21270 BRM78_21280 SM00491 BRM78_21280 BRM78_21310 SM00477 DNA/RNA non-specific endonuclease BRM78_21310 SM00892 DNA/RNA non-specific endonuclease BRM78_21330 SM01004 Delta-aminolevulinic acid dehydratase BRM78_21385 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BRM78_21405 SM00382 ATPases associated with a variety of cellular activities BRM78_21415 SM00530 Helix-turn-helix XRE-family like proteins BRM78_21440 SM00382 ATPases associated with a variety of cellular activities BRM78_21485 SM01126 BRM78_21485 BRM78_21580 SM00563 Phosphate acyltransferases BRM78_21610 SM01126 BRM78_21610 BRM78_21635 SM00346 helix_turn_helix isocitrate lyase regulation BRM78_21645 SM00091 PAS domain BRM78_21645 SM00387 Histidine kinase-like ATPases BRM78_21645 SM00388 His Kinase A (phosphoacceptor) domain BRM78_21645 SM00448 cheY-homologous receiver domain BRM78_21685 SM00564 beta-propeller repeat BRM78_21755 SM01126 BRM78_21755 BRM78_21770 SM00382 ATPases associated with a variety of cellular activities BRM78_21810 SM01126 BRM78_21810 BRM78_21820 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BRM78_21820 SM01232 BRM78_21820 BRM78_21870 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRM78_21870 SM00091 PAS domain BRM78_21945 SM00829 Enoylreductase BRM78_21990 SM00344 helix_turn_helix ASNC type BRM78_22040 SM00563 Phosphate acyltransferases BRM78_22055 SM00354 helix_turn _helix lactose operon repressor BRM78_22075 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BRM78_22110 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRM78_22110 SM00388 His Kinase A (phosphoacceptor) domain BRM78_22180 SM01228 BRM78_22180 BRM78_22270 SM00938 Nitrogen regulatory protein P-II BRM78_22280 SM00382 ATPases associated with a variety of cellular activities BRM78_22335 SM00642 Alpha-amylase domain BRM78_22340 SM00642 Alpha-amylase domain BRM78_22345 SM00642 Alpha-amylase domain BRM78_22375 SM00354 helix_turn _helix lactose operon repressor BRM78_22485 SM00487 DEAD-like helicases superfamily BRM78_22485 SM00490 helicase superfamily c-terminal domain BRM78_22535 SM00382 ATPases associated with a variety of cellular activities BRM78_22655 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRM78_22680 SM00369 Leucine-rich repeats, typical (most populated) subfamily BRM78_22810 SM00382 ATPases associated with a variety of cellular activities BRM78_22895 SM00267 diguanylate cyclase BRM78_22905 SM00642 Alpha-amylase domain BRM78_22910 SM00642 Alpha-amylase domain BRM78_22920 SM00642 Alpha-amylase domain BRM78_22930 SM00642 Alpha-amylase domain BRM78_22965 SM01126 BRM78_22965 BRM78_23050 SM00487 DEAD-like helicases superfamily BRM78_23050 SM00490 helicase superfamily c-terminal domain BRM78_23110 SM00382 ATPases associated with a variety of cellular activities BRM78_23195 SM00155 Phospholipase D. Active site motifs. BRM78_23230 SM00028 Tetratricopeptide repeats BRM78_23245 SM00387 Histidine kinase-like ATPases BRM78_23245 SM00433 TopoisomeraseII BRM78_23260 SM00480 DNA polymerase III beta subunit BRM78_23265 SM00382 ATPases associated with a variety of cellular activities BRM78_23265 SM00760 Bacterial dnaA protein helix-turn-helix domain