locus-tag class description BRM84_00010 PF08299 Bacterial dnaA protein helix-turn-helix BRM84_00010 PF11638 DnaA N-terminal domain BRM84_00010 PF00308 Bacterial dnaA protein BRM84_00015 PF02768 DNA polymerase III beta subunit, C-terminal domain BRM84_00015 PF00712 DNA polymerase III beta subunit, N-terminal domain BRM84_00015 PF02767 DNA polymerase III beta subunit, central domain BRM84_00025 PF02463 RecF/RecN/SMC N terminal domain BRM84_00030 PF00204 DNA gyrase B BRM84_00030 PF00986 DNA gyrase B subunit, carboxyl terminus BRM84_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_00030 PF01751 Toprim domain BRM84_00030 PF18053 DNA gyrase B subunit insert domain BRM84_00040 PF01435 Peptidase family M48 BRM84_00050 PF03544 Gram-negative bacterial TonB protein C-terminal BRM84_00055 PF01618 MotA/TolQ/ExbB proton channel family BRM84_00060 PF02472 Biopolymer transport protein ExbD/TolR BRM84_00065 PF02472 Biopolymer transport protein ExbD/TolR BRM84_00070 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BRM84_00080 PF13091 PLD-like domain BRM84_00080 PF13396 Phospholipase_D-nuclease N-terminal BRM84_00090 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BRM84_00095 PF00155 Aminotransferase class I and II BRM84_00100 PF00593 TonB dependent receptor BRM84_00100 PF07715 TonB-dependent Receptor Plug Domain BRM84_00115 PF05598 Transposase domain (DUF772) BRM84_00115 PF01609 Transposase DDE domain BRM84_00120 PF01070 FMN-dependent dehydrogenase BRM84_00125 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family BRM84_00140 PF07055 Enoyl reductase FAD binding domain BRM84_00140 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase BRM84_00140 PF12241 Trans-2-enoyl-CoA reductase catalytic region BRM84_00150 PF00294 pfkB family carbohydrate kinase BRM84_00160 PF01609 Transposase DDE domain BRM84_00160 PF05598 Transposase domain (DUF772) BRM84_00165 PF00005 ABC transporter BRM84_00175 PF05598 Transposase domain (DUF772) BRM84_00215 PF01609 Transposase DDE domain BRM84_00215 PF05598 Transposase domain (DUF772) BRM84_00225 PF00270 DEAD/DEAH box helicase BRM84_00225 PF00271 Helicase conserved C-terminal domain BRM84_00240 PF06903 VirK protein BRM84_00330 PF03150 Di-haem cytochrome c peroxidase BRM84_00340 PF13460 NAD(P)H-binding BRM84_00345 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BRM84_00345 PF00128 Alpha amylase, catalytic domain BRM84_00355 PF00128 Alpha amylase, catalytic domain BRM84_00360 PF02446 4-alpha-glucanotransferase BRM84_00365 PF11941 Domain of unknown function (DUF3459) BRM84_00365 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BRM84_00365 PF00128 Alpha amylase, catalytic domain BRM84_00370 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BRM84_00370 PF00128 Alpha amylase, catalytic domain BRM84_00370 PF02806 Alpha amylase, C-terminal all-beta domain BRM84_00375 PF00534 Glycosyl transferases group 1 BRM84_00375 PF08323 Starch synthase catalytic domain BRM84_00380 PF00990 Diguanylate cyclase, GGDEF domain BRM84_00380 PF00072 Response regulator receiver domain BRM84_00390 PF05661 Protein of unknown function (DUF808) BRM84_00400 PF03109 ABC1 family BRM84_00415 PF12795 Mechanosensitive ion channel porin domain BRM84_00415 PF00924 Mechanosensitive ion channel BRM84_00415 PF12794 Mechanosensitive ion channel inner membrane domain 1 BRM84_00440 PF01464 Transglycosylase SLT domain BRM84_00455 PF01311 Bacterial export proteins, family 1 BRM84_00465 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BRM84_00465 PF02874 ATP synthase alpha/beta family, beta-barrel domain BRM84_00465 PF18269 T3SS EscN ATPase C-terminal domain BRM84_00480 PF01514 Secretory protein of YscJ/FliF family BRM84_00495 PF01312 FlhB HrpN YscU SpaS Family BRM84_00500 PF00771 FHIPEP family BRM84_00515 PF00813 FliP family BRM84_00520 PF01313 Bacterial export proteins, family 3 BRM84_00575 PF05598 Transposase domain (DUF772) BRM84_00575 PF01609 Transposase DDE domain BRM84_00585 PF01609 Transposase DDE domain BRM84_00585 PF05598 Transposase domain (DUF772) BRM84_00590 PF05819 NolX protein BRM84_00620 PF00595 PDZ domain BRM84_00630 PF00512 His Kinase A (phospho-acceptor) domain BRM84_00630 PF08521 Two-component sensor kinase N-terminal BRM84_00630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_00640 PF01370 NAD dependent epimerase/dehydratase family BRM84_00640 PF08338 Domain of unknown function (DUF1731) BRM84_00650 PF05598 Transposase domain (DUF772) BRM84_00650 PF01609 Transposase DDE domain BRM84_00675 PF00665 Integrase core domain BRM84_00675 PF13936 Helix-turn-helix domain BRM84_00695 PF00293 NUDIX domain BRM84_00695 PF13344 Haloacid dehalogenase-like hydrolase BRM84_00725 PF13533 Biotin-lipoyl like BRM84_00735 PF00005 ABC transporter BRM84_00760 PF08845 Toxin SymE, type I toxin-antitoxin system BRM84_00780 PF03006 Haemolysin-III related BRM84_00785 PF00271 Helicase conserved C-terminal domain BRM84_00785 PF09369 Domain of unknown function (DUF1998) BRM84_00785 PF00270 DEAD/DEAH box helicase BRM84_00850 PF00310 Glutamine amidotransferases class-II BRM84_00850 PF04898 Glutamate synthase central domain BRM84_00850 PF01645 Conserved region in glutamate synthase BRM84_00850 PF01493 GXGXG motif BRM84_00855 PF07992 Pyridine nucleotide-disulphide oxidoreductase BRM84_00855 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BRM84_00885 PF05598 Transposase domain (DUF772) BRM84_00895 PF00356 Bacterial regulatory proteins, lacI family BRM84_00925 PF02806 Alpha amylase, C-terminal all-beta domain BRM84_00925 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BRM84_00925 PF00128 Alpha amylase, catalytic domain BRM84_00930 PF16657 Maltogenic Amylase, C-terminal domain BRM84_00930 PF00128 Alpha amylase, catalytic domain BRM84_00935 PF00128 Alpha amylase, catalytic domain BRM84_00935 PF11896 Domain of unknown function (DUF3416) BRM84_00990 PF01078 Magnesium chelatase, subunit ChlI BRM84_00990 PF13335 Magnesium chelatase, subunit ChlI C-terminal BRM84_00995 PF04380 Membrane fusogenic activity BRM84_01000 PF00543 Nitrogen regulatory protein P-II BRM84_01035 PF17284 Spermidine synthase tetramerisation domain BRM84_01040 PF17810 Arginine decarboxylase helical bundle domain BRM84_01040 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BRM84_01040 PF17944 Arginine decarboxylase C-terminal helical extension BRM84_01045 PF05598 Transposase domain (DUF772) BRM84_01050 PF04717 Type VI secretion system, phage-baseplate injector BRM84_01050 PF16671 Actin cross-linking domain BRM84_01090 PF13932 GidA associated domain BRM84_01090 PF01134 Glucose inhibited division protein A BRM84_01105 PF00291 Pyridoxal-phosphate dependent enzyme BRM84_01125 PF13649 Methyltransferase domain BRM84_01135 PF12697 Alpha/beta hydrolase family BRM84_01155 PF04349 Periplasmic glucan biosynthesis protein, MdoG BRM84_01165 PF00265 Thymidine kinase BRM84_01170 PF13361 UvrD-like helicase C-terminal domain BRM84_01170 PF00580 UvrD/REP helicase N-terminal domain BRM84_01185 PF04337 Protein of unknown function, DUF480 BRM84_01190 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) BRM84_01195 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BRM84_01200 PF04820 Tryptophan halogenase BRM84_01215 PF00356 Bacterial regulatory proteins, lacI family BRM84_01230 PF01553 Acyltransferase BRM84_01260 PF00657 GDSL-like Lipase/Acylhydrolase BRM84_01275 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BRM84_01280 PF01037 Lrp/AsnC ligand binding domain BRM84_01325 PF08240 Alcohol dehydrogenase GroES-like domain BRM84_01325 PF00107 Zinc-binding dehydrogenase BRM84_01335 PF00150 Cellulase (glycosyl hydrolase family 5) BRM84_01345 PF00150 Cellulase (glycosyl hydrolase family 5) BRM84_01355 PF00150 Cellulase (glycosyl hydrolase family 5) BRM84_01365 PF02810 SEC-C motif BRM84_01380 PF01609 Transposase DDE domain BRM84_01380 PF05598 Transposase domain (DUF772) BRM84_01385 PF01263 Aldose 1-epimerase BRM84_01390 PF07690 Major Facilitator Superfamily BRM84_01395 PF01126 Heme oxygenase BRM84_01400 PF13426 PAS domain BRM84_01400 PF08446 PAS fold BRM84_01400 PF00360 Phytochrome region BRM84_01400 PF01590 GAF domain BRM84_01450 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BRM84_01450 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BRM84_01450 PF06827 Zinc finger found in FPG and IleRS BRM84_01475 PF04333 MlaA lipoprotein BRM84_01485 PF05494 MlaC protein BRM84_01490 PF02470 MlaD protein BRM84_01495 PF02405 Permease MlaE BRM84_01500 PF00005 ABC transporter BRM84_01535 PF01609 Transposase DDE domain BRM84_01535 PF05598 Transposase domain (DUF772) BRM84_01585 PF13570 PQQ-like domain BRM84_01585 PF13360 PQQ-like domain BRM84_01585 PF01011 PQQ enzyme repeat BRM84_01610 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BRM84_01610 PF06165 Glycosyltransferase family 36 BRM84_01625 PF00512 His Kinase A (phospho-acceptor) domain BRM84_01625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_01630 PF02659 Putative manganese efflux pump BRM84_01635 PF01614 Bacterial transcriptional regulator BRM84_01635 PF09339 IclR helix-turn-helix domain BRM84_01640 PF07690 Major Facilitator Superfamily BRM84_01645 PF05336 L-rhamnose mutarotase BRM84_01675 PF01432 Peptidase family M3 BRM84_01695 PF00472 RF-1 domain BRM84_01705 PF00849 RNA pseudouridylate synthase BRM84_01715 PF03109 ABC1 family BRM84_01815 PF02558 Ketopantoate reductase PanE/ApbA BRM84_01815 PF08546 Ketopantoate reductase PanE/ApbA C terminal BRM84_01825 PF01061 ABC-2 type transporter BRM84_01830 PF00005 ABC transporter BRM84_01835 PF01383 CpcD/allophycocyanin linker domain BRM84_01835 PF00175 Oxidoreductase NAD-binding domain BRM84_01840 PF01545 Cation efflux family BRM84_01845 PF02583 Metal-sensitive transcriptional repressor BRM84_01855 PF01381 Helix-turn-helix BRM84_01865 PF00005 ABC transporter BRM84_01880 PF04820 Tryptophan halogenase BRM84_01905 PF02798 Glutathione S-transferase, N-terminal domain BRM84_01905 PF00043 Glutathione S-transferase, C-terminal domain BRM84_01915 PF00326 Prolyl oligopeptidase family BRM84_01915 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BRM84_01940 PF00490 Delta-aminolevulinic acid dehydratase BRM84_01955 PF03466 LysR substrate binding domain BRM84_01955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BRM84_01965 PF00258 Flavodoxin BRM84_01965 PF00175 Oxidoreductase NAD-binding domain BRM84_01965 PF00667 FAD binding domain BRM84_01980 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BRM84_01980 PF01488 Shikimate / quinate 5-dehydrogenase BRM84_01980 PF08501 Shikimate dehydrogenase substrate binding domain BRM84_01990 PF06733 DEAD_2 BRM84_01990 PF13307 Helicase C-terminal domain BRM84_02010 PF13533 Biotin-lipoyl like BRM84_02015 PF00199 Catalase BRM84_02015 PF06628 Catalase-related immune-responsive BRM84_02040 PF01207 Dihydrouridine synthase (Dus) BRM84_02050 PF00486 Transcriptional regulatory protein, C terminal BRM84_02050 PF00072 Response regulator receiver domain BRM84_02055 PF00672 HAMP domain BRM84_02055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_02055 PF00512 His Kinase A (phospho-acceptor) domain BRM84_02080 PF08279 HTH domain BRM84_02080 PF03099 Biotin/lipoate A/B protein ligase family BRM84_02080 PF02237 Biotin protein ligase C terminal domain BRM84_02085 PF03309 Type III pantothenate kinase BRM84_02100 PF02223 Thymidylate kinase BRM84_02125 PF00491 Arginase family BRM84_02140 PF05532 CsbD-like BRM84_02145 PF00579 tRNA synthetases class I (W and Y) BRM84_02150 PF00753 Metallo-beta-lactamase superfamily BRM84_02180 PF00892 EamA-like transporter family BRM84_02200 PF00199 Catalase BRM84_02205 PF04542 Sigma-70 region 2 BRM84_02205 PF08281 Sigma-70, region 4 BRM84_02215 PF00883 Cytosol aminopeptidase family, catalytic domain BRM84_02215 PF02789 Cytosol aminopeptidase family, N-terminal domain BRM84_02225 PF01594 AI-2E family transporter BRM84_02240 PF01040 UbiA prenyltransferase family BRM84_02250 PF04055 Radical SAM superfamily BRM84_02250 PF06968 Biotin and Thiamin Synthesis associated domain BRM84_02255 PF00155 Aminotransferase class I and II BRM84_02285 PF00535 Glycosyl transferase family 2 BRM84_02295 PF00109 Beta-ketoacyl synthase, N-terminal domain BRM84_02295 PF02801 Beta-ketoacyl synthase, C-terminal domain BRM84_02300 PF05166 YcgL domain BRM84_02315 PF00723 Glycosyl hydrolases family 15 BRM84_02320 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BRM84_02320 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BRM84_02335 PF00999 Sodium/hydrogen exchanger family BRM84_02335 PF02254 TrkA-N domain BRM84_02340 PF03448 MgtE intracellular N domain BRM84_02340 PF01769 Divalent cation transporter BRM84_02340 PF00571 CBS domain BRM84_02350 PF13380 CoA binding domain BRM84_02350 PF13607 Succinyl-CoA ligase like flavodoxin domain BRM84_02350 PF00583 Acetyltransferase (GNAT) family BRM84_02360 PF00317 Ribonucleotide reductase, all-alpha domain BRM84_02360 PF02867 Ribonucleotide reductase, barrel domain BRM84_02360 PF03477 ATP cone domain BRM84_02370 PF00268 Ribonucleotide reductase, small chain BRM84_02400 PF00108 Thiolase, N-terminal domain BRM84_02400 PF02803 Thiolase, C-terminal domain BRM84_02405 PF00775 Dioxygenase BRM84_02405 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal BRM84_02420 PF00206 Lyase BRM84_02420 PF10397 Adenylosuccinate lyase C-terminus BRM84_02425 PF12146 Serine aminopeptidase, S33 BRM84_02430 PF02627 Carboxymuconolactone decarboxylase family BRM84_02460 PF00106 short chain dehydrogenase BRM84_02475 PF00750 tRNA synthetases class I (R) BRM84_02475 PF03485 Arginyl tRNA synthetase N terminal domain BRM84_02475 PF05746 DALR anticodon binding domain BRM84_02480 PF04002 RadC-like JAB domain BRM84_02485 PF02441 Flavoprotein BRM84_02485 PF04127 DNA / pantothenate metabolism flavoprotein BRM84_02490 PF00692 dUTPase BRM84_02495 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BRM84_02495 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BRM84_02495 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BRM84_02495 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BRM84_02510 PF00535 Glycosyl transferase family 2 BRM84_02515 PF01370 NAD dependent epimerase/dehydratase family BRM84_02525 PF02195 ParB-like nuclease domain BRM84_02525 PF17762 HTH domain found in ParB protein BRM84_02530 PF13614 AAA domain BRM84_02540 PF00156 Phosphoribosyl transferase domain BRM84_02545 PF03372 Endonuclease/Exonuclease/phosphatase family BRM84_02550 PF07690 Major Facilitator Superfamily BRM84_02560 PF03702 Anhydro-N-acetylmuramic acid kinase BRM84_02565 PF04225 Opacity-associated protein A LysM-like domain BRM84_02565 PF01551 Peptidase family M23 BRM84_02570 PF00579 tRNA synthetases class I (W and Y) BRM84_02610 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BRM84_02610 PF00072 Response regulator receiver domain BRM84_02610 PF01627 Hpt domain BRM84_02610 PF00512 His Kinase A (phospho-acceptor) domain BRM84_02610 PF00672 HAMP domain BRM84_02610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_02615 PF00486 Transcriptional regulatory protein, C terminal BRM84_02615 PF00072 Response regulator receiver domain BRM84_02640 PF01521 Iron-sulphur cluster biosynthesis BRM84_02650 PF09297 NADH pyrophosphatase zinc ribbon domain BRM84_02650 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain BRM84_02650 PF00293 NUDIX domain BRM84_02655 PF03186 CobD/Cbib protein BRM84_02655 PF17113 Regulatory signalling modulator protein AmpE BRM84_02680 PF07690 Major Facilitator Superfamily BRM84_02695 PF12805 FUSC-like inner membrane protein yccS BRM84_02705 PF02687 FtsX-like permease family BRM84_02705 PF00005 ABC transporter BRM84_02705 PF12704 MacB-like periplasmic core domain BRM84_02710 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BRM84_02710 PF02843 Phosphoribosylglycinamide synthetase, C domain BRM84_02710 PF02844 Phosphoribosylglycinamide synthetase, N domain BRM84_02720 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system BRM84_02725 PF02142 MGS-like domain BRM84_02725 PF01808 AICARFT/IMPCHase bienzyme BRM84_02735 PF12147 Putative methyltransferase BRM84_02735 PF12146 Serine aminopeptidase, S33 BRM84_02745 PF12146 Serine aminopeptidase, S33 BRM84_02745 PF12147 Putative methyltransferase BRM84_02750 PF00782 Dual specificity phosphatase, catalytic domain BRM84_02765 PF02954 Bacterial regulatory protein, Fis family BRM84_02780 PF01381 Helix-turn-helix BRM84_02825 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BRM84_02825 PF00289 Biotin carboxylase, N-terminal domain BRM84_02825 PF02785 Biotin carboxylase C-terminal domain BRM84_02835 PF00364 Biotin-requiring enzyme BRM84_02840 PF01220 Dehydroquinase class II BRM84_02855 PF02683 Cytochrome C biogenesis protein transmembrane region BRM84_02855 PF11412 Disulphide bond corrector protein DsbC BRM84_02860 PF03091 CutA1 divalent ion tolerance protein BRM84_02895 PF18074 Primosomal protein N C-terminal domain BRM84_02895 PF00270 DEAD/DEAH box helicase BRM84_02895 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BRM84_02895 PF00271 Helicase conserved C-terminal domain BRM84_02895 PF17764 3′ DNA-binding domain (3′BD) BRM84_02925 PF01554 MatE BRM84_02930 PF01343 Peptidase family S49 BRM84_02955 PF01300 Telomere recombination BRM84_02960 PF13368 Topoisomerase C-terminal repeat BRM84_02960 PF01131 DNA topoisomerase BRM84_02960 PF01751 Toprim domain BRM84_02970 PF07963 Prokaryotic N-terminal methylation motif BRM84_02970 PF00114 Pilin (bacterial filament) BRM84_02975 PF04361 Protein of unknown function (DUF494) BRM84_02980 PF17782 DprA winged helix domain BRM84_02980 PF02481 DNA recombination-mediator protein A BRM84_02985 PF01476 LysM domain BRM84_02990 PF01327 Polypeptide deformylase BRM84_02995 PF00551 Formyl transferase BRM84_02995 PF02911 Formyl transferase, C-terminal domain BRM84_03000 PF01029 NusB family BRM84_03000 PF01189 16S rRNA methyltransferase RsmB/F BRM84_03015 PF00535 Glycosyl transferase family 2 BRM84_03035 PF00925 GTP cyclohydrolase II BRM84_03050 PF03279 Bacterial lipid A biosynthesis acyltransferase BRM84_03055 PF02580 D-Tyr-tRNA(Tyr) deacylase BRM84_03060 PF04545 Sigma-70, region 4 BRM84_03060 PF04539 Sigma-70 region 3 BRM84_03060 PF00140 Sigma-70 factor, region 1.2 BRM84_03060 PF04546 Sigma-70, non-essential region BRM84_03060 PF03979 Sigma-70 factor, region 1.1 BRM84_03060 PF04542 Sigma-70 region 2 BRM84_03145 PF00005 ABC transporter BRM84_03160 PF00593 TonB dependent receptor BRM84_03160 PF07715 TonB-dependent Receptor Plug Domain BRM84_03215 PF02322 Cytochrome bd terminal oxidase subunit II BRM84_03220 PF01654 Cytochrome bd terminal oxidase subunit I BRM84_03235 PF00158 Sigma-54 interaction domain BRM84_03235 PF00072 Response regulator receiver domain BRM84_03235 PF02954 Bacterial regulatory protein, Fis family BRM84_03265 PF02743 Cache domain BRM84_03265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_03265 PF06580 Histidine kinase BRM84_03265 PF00672 HAMP domain BRM84_03280 PF13520 Amino acid permease BRM84_03300 PF05649 Peptidase family M13 BRM84_03300 PF01431 Peptidase family M13 BRM84_03315 PF00248 Aldo/keto reductase family BRM84_03320 PF03358 NADPH-dependent FMN reductase BRM84_03330 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BRM84_03340 PF03167 Uracil DNA glycosylase superfamily BRM84_03350 PF02469 Fasciclin domain BRM84_03365 PF00999 Sodium/hydrogen exchanger family BRM84_03370 PF00005 ABC transporter BRM84_03375 PF01061 ABC-2 type transporter BRM84_03390 PF00082 Subtilase family BRM84_03390 PF04151 Bacterial pre-peptidase C-terminal domain BRM84_03400 PF08448 PAS fold BRM84_03400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_03400 PF00512 His Kinase A (phospho-acceptor) domain BRM84_03400 PF13188 PAS domain BRM84_03400 PF00072 Response regulator receiver domain BRM84_03405 PF00072 Response regulator receiver domain BRM84_03405 PF00486 Transcriptional regulatory protein, C terminal BRM84_03425 PF00691 OmpA family BRM84_03425 PF13677 Membrane MotB of proton-channel complex MotA/MotB BRM84_03430 PF01618 MotA/TolQ/ExbB proton channel family BRM84_03440 PF01641 SelR domain BRM84_03450 PF01037 Lrp/AsnC ligand binding domain BRM84_03455 PF01266 FAD dependent oxidoreductase BRM84_03460 PF01168 Alanine racemase, N-terminal domain BRM84_03460 PF00842 Alanine racemase, C-terminal domain BRM84_03480 PF00512 His Kinase A (phospho-acceptor) domain BRM84_03480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_03480 PF00989 PAS fold BRM84_03495 PF07995 Glucose / Sorbosone dehydrogenase BRM84_03515 PF05175 Methyltransferase small domain BRM84_03515 PF08468 Methyltransferase small domain N-terminal BRM84_03520 PF01479 S4 domain BRM84_03520 PF00849 RNA pseudouridylate synthase BRM84_03525 PF13419 Haloacid dehalogenase-like hydrolase BRM84_03555 PF04461 Protein of unknown function (DUF520) BRM84_03560 PF00892 EamA-like transporter family BRM84_03565 PF09383 NIL domain BRM84_03565 PF00005 ABC transporter BRM84_03570 PF00528 Binding-protein-dependent transport system inner membrane component BRM84_03575 PF03180 NLPA lipoprotein BRM84_03600 PF02817 e3 binding domain BRM84_03600 PF00364 Biotin-requiring enzyme BRM84_03600 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BRM84_03610 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BRM84_03610 PF07992 Pyridine nucleotide-disulphide oxidoreductase BRM84_03630 PF00119 ATP synthase A chain BRM84_03635 PF00137 ATP synthase subunit C BRM84_03640 PF00430 ATP synthase B/B' CF(0) BRM84_03645 PF00213 ATP synthase delta (OSCP) subunit BRM84_03650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BRM84_03650 PF02874 ATP synthase alpha/beta family, beta-barrel domain BRM84_03650 PF00306 ATP synthase alpha/beta chain, C terminal domain BRM84_03655 PF00231 ATP synthase BRM84_03660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BRM84_03660 PF02874 ATP synthase alpha/beta family, beta-barrel domain BRM84_03665 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BRM84_03670 PF01817 Chorismate mutase type II BRM84_03685 PF14602 Hexapeptide repeat of succinyl-transferase BRM84_03685 PF00132 Bacterial transferase hexapeptide (six repeats) BRM84_03685 PF12804 MobA-like NTP transferase domain BRM84_03720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BRM84_03725 PF01380 SIS domain BRM84_03755 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BRM84_03760 PF01609 Transposase DDE domain BRM84_03760 PF05598 Transposase domain (DUF772) BRM84_03765 PF05275 Copper resistance protein B precursor (CopB) BRM84_03770 PF00394 Multicopper oxidase BRM84_03770 PF07731 Multicopper oxidase BRM84_03770 PF07732 Multicopper oxidase BRM84_03785 PF01432 Peptidase family M3 BRM84_03795 PF00109 Beta-ketoacyl synthase, N-terminal domain BRM84_03795 PF02801 Beta-ketoacyl synthase, C-terminal domain BRM84_03800 PF07977 FabA-like domain BRM84_03810 PF11799 impB/mucB/samB family C-terminal domain BRM84_03810 PF00817 impB/mucB/samB family BRM84_03815 PF13419 Haloacid dehalogenase-like hydrolase BRM84_03825 PF13185 GAF domain BRM84_03840 PF01242 6-pyruvoyl tetrahydropterin synthase BRM84_03850 PF00271 Helicase conserved C-terminal domain BRM84_03850 PF00270 DEAD/DEAH box helicase BRM84_03865 PF13417 Glutathione S-transferase, N-terminal domain BRM84_03870 PF00437 Type II/IV secretion system protein BRM84_03890 PF00571 CBS domain BRM84_03890 PF00291 Pyridoxal-phosphate dependent enzyme BRM84_03895 PF01053 Cys/Met metabolism PLP-dependent enzyme BRM84_03905 PF01370 NAD dependent epimerase/dehydratase family BRM84_03945 PF00872 Transposase, Mutator family BRM84_03955 PF00005 ABC transporter BRM84_03965 PF01012 Electron transfer flavoprotein domain BRM84_03965 PF00766 Electron transfer flavoprotein FAD-binding domain BRM84_03970 PF01012 Electron transfer flavoprotein domain BRM84_03975 PF16363 GDP-mannose 4,6 dehydratase BRM84_03980 PF00483 Nucleotidyl transferase BRM84_03985 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BRM84_03990 PF04321 RmlD substrate binding domain BRM84_03995 PF00483 Nucleotidyl transferase BRM84_03995 PF01050 Mannose-6-phosphate isomerase BRM84_04000 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BRM84_04000 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BRM84_04000 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BRM84_04000 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BRM84_04005 PF01144 Coenzyme A transferase BRM84_04010 PF01144 Coenzyme A transferase BRM84_04015 PF14307 Glycosyltransferase WbsX BRM84_04015 PF05045 Rhamnan synthesis protein F BRM84_04040 PF02470 MlaD protein BRM84_04040 PF03886 ABC-type transport auxiliary lipoprotein component BRM84_04045 PF00005 ABC transporter BRM84_04050 PF02405 Permease MlaE BRM84_04060 PF00816 H-NS histone family BRM84_04065 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BRM84_04065 PF04073 Aminoacyl-tRNA editing domain BRM84_04065 PF03129 Anticodon binding domain BRM84_04075 PF01066 CDP-alcohol phosphatidyltransferase BRM84_04105 PF05598 Transposase domain (DUF772) BRM84_04105 PF01609 Transposase DDE domain BRM84_04120 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain BRM84_04120 PF01464 Transglycosylase SLT domain BRM84_04125 PF00544 Pectate lyase BRM84_04175 PF08264 Anticodon-binding domain of tRNA BRM84_04175 PF10458 Valyl tRNA synthetase tRNA binding arm BRM84_04175 PF00133 tRNA synthetases class I (I, L, M and V) BRM84_04190 PF00883 Cytosol aminopeptidase family, catalytic domain BRM84_04190 PF02789 Cytosol aminopeptidase family, N-terminal domain BRM84_04200 PF03739 Lipopolysaccharide export system permease LptF/LptG BRM84_04210 PF05598 Transposase domain (DUF772) BRM84_04210 PF01609 Transposase DDE domain BRM84_04225 PF02899 Phage integrase, N-terminal SAM-like domain BRM84_04225 PF00589 Phage integrase family BRM84_04230 PF10411 Disulfide bond isomerase protein N-terminus BRM84_04230 PF13098 Thioredoxin-like domain BRM84_04235 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BRM84_04235 PF02769 AIR synthase related protein, C-terminal domain BRM84_04235 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BRM84_04245 PF05662 Coiled stalk of trimeric autotransporter adhesin BRM84_04245 PF13018 Extended Signal Peptide of Type V secretion system BRM84_04245 PF03895 YadA-like membrane anchor domain BRM84_04245 PF05658 Head domain of trimeric autotransporter adhesin BRM84_04265 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BRM84_04265 PF00437 Type II/IV secretion system protein BRM84_04275 PF00482 Type II secretion system (T2SS), protein F BRM84_04280 PF08334 Type II secretion system (T2SS), protein G BRM84_04285 PF12019 Type II transport protein GspH BRM84_04290 PF07963 Prokaryotic N-terminal methylation motif BRM84_04300 PF03934 Type II secretion system (T2SS), protein K BRM84_04305 PF05137 Fimbrial assembly protein (PilN) BRM84_04310 PF10741 Type II secretion system (T2SS), protein M subtype b BRM84_04320 PF00263 Bacterial type II and III secretion system protein BRM84_04320 PF03958 Bacterial type II/III secretion system short domain BRM84_04335 PF07702 UTRA domain BRM84_04335 PF00392 Bacterial regulatory proteins, gntR family BRM84_04350 PF00593 TonB dependent receptor BRM84_04350 PF07715 TonB-dependent Receptor Plug Domain BRM84_04390 PF09827 CRISPR associated protein Cas2 BRM84_04395 PF01867 CRISPR associated protein Cas1 BRM84_04415 PF09704 CRISPR-associated protein (Cas_Cas5) BRM84_04435 PF02545 Maf-like protein BRM84_04440 PF02620 Large ribosomal RNA subunit accumulation protein YceD BRM84_04445 PF01783 Ribosomal L32p protein family BRM84_04450 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BRM84_04450 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BRM84_04460 PF00698 Acyl transferase domain BRM84_04470 PF00550 Phosphopantetheine attachment site BRM84_04475 PF00109 Beta-ketoacyl synthase, N-terminal domain BRM84_04475 PF02801 Beta-ketoacyl synthase, C-terminal domain BRM84_04480 PF04715 Anthranilate synthase component I, N terminal region BRM84_04480 PF00425 chorismate binding enzyme BRM84_04485 PF02618 YceG-like family BRM84_04490 PF09115 DNA polymerase III, delta subunit, C terminal BRM84_04520 PF02954 Bacterial regulatory protein, Fis family BRM84_04520 PF00158 Sigma-54 interaction domain BRM84_04520 PF06506 Propionate catabolism activator BRM84_04530 PF00285 Citrate synthase, C-terminal domain BRM84_04535 PF00694 Aconitase C-terminal domain BRM84_04535 PF00330 Aconitase family (aconitate hydratase) BRM84_04550 PF04303 PrpF protein BRM84_04555 PF01609 Transposase DDE domain BRM84_04555 PF05598 Transposase domain (DUF772) BRM84_04560 PF00593 TonB dependent receptor BRM84_04560 PF07715 TonB-dependent Receptor Plug Domain BRM84_04615 PF13936 Helix-turn-helix domain BRM84_04615 PF00665 Integrase core domain BRM84_04625 PF08534 Redoxin BRM84_04635 PF00226 DnaJ domain BRM84_04635 PF01556 DnaJ C terminal domain BRM84_04640 PF00072 Response regulator receiver domain BRM84_04645 PF12221 Bacterial membrane protein N terminal BRM84_04645 PF01145 SPFH domain / Band 7 family BRM84_04650 PF01145 SPFH domain / Band 7 family BRM84_04660 PF00709 Adenylosuccinate synthetase BRM84_04665 PF11838 ERAP1-like C-terminal domain BRM84_04665 PF01433 Peptidase family M1 domain BRM84_04675 PF05598 Transposase domain (DUF772) BRM84_04715 PF03279 Bacterial lipid A biosynthesis acyltransferase BRM84_04720 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BRM84_04725 PF02321 Outer membrane efflux protein BRM84_04750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BRM84_04755 PF00330 Aconitase family (aconitate hydratase) BRM84_04760 PF00694 Aconitase C-terminal domain BRM84_04770 PF00180 Isocitrate/isopropylmalate dehydrogenase BRM84_04775 PF00682 HMGL-like BRM84_04775 PF08502 LeuA allosteric (dimerisation) domain BRM84_04780 PF00291 Pyridoxal-phosphate dependent enzyme BRM84_04790 PF00205 Thiamine pyrophosphate enzyme, central domain BRM84_04790 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BRM84_04790 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BRM84_04795 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BRM84_04795 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BRM84_04805 PF01964 Radical SAM ThiC family BRM84_04805 PF13667 ThiC-associated domain BRM84_04810 PF00486 Transcriptional regulatory protein, C terminal BRM84_04810 PF18500 CadC C-terminal domain 1 BRM84_04815 PF12833 Helix-turn-helix domain BRM84_04820 PF00593 TonB dependent receptor BRM84_04820 PF07715 TonB-dependent Receptor Plug Domain BRM84_04835 PF00719 Inorganic pyrophosphatase BRM84_04855 PF03030 Inorganic H+ pyrophosphatase BRM84_04875 PF00365 Phosphofructokinase BRM84_04885 PF01225 Mur ligase family, catalytic domain BRM84_04885 PF02875 Mur ligase family, glutamate ligase domain BRM84_04885 PF08245 Mur ligase middle domain BRM84_04895 PF01062 Bestrophin, RFP-TM, chloride channel BRM84_04915 PF00043 Glutathione S-transferase, C-terminal domain BRM84_04915 PF02798 Glutathione S-transferase, N-terminal domain BRM84_04920 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BRM84_04920 PF00056 lactate/malate dehydrogenase, NAD binding domain BRM84_04925 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BRM84_04950 PF01474 Class-II DAHP synthetase family BRM84_04960 PF02600 Disulfide bond formation protein DsbB BRM84_05085 PF05598 Transposase domain (DUF772) BRM84_05085 PF01609 Transposase DDE domain BRM84_05110 PF03009 Glycerophosphoryl diester phosphodiesterase family BRM84_05135 PF00180 Isocitrate/isopropylmalate dehydrogenase BRM84_05135 PF18324 Hypothetical protein TT1725 BRM84_05190 PF05698 Bacterial trigger factor protein (TF) C-terminus BRM84_05190 PF05697 Bacterial trigger factor protein (TF) BRM84_05195 PF00574 Clp protease BRM84_05200 PF06689 ClpX C4-type zinc finger BRM84_05200 PF10431 C-terminal, D2-small domain, of ClpB protein BRM84_05200 PF07724 AAA domain (Cdc48 subfamily) BRM84_05205 PF05362 Lon protease (S16) C-terminal proteolytic domain BRM84_05205 PF02190 ATP-dependent protease La (LON) substrate-binding domain BRM84_05205 PF00004 ATPase family associated with various cellular activities (AAA) BRM84_05210 PF00216 Bacterial DNA-binding protein BRM84_05235 PF05257 CHAP domain BRM84_05235 PF01476 LysM domain BRM84_05240 PF00753 Metallo-beta-lactamase superfamily BRM84_05240 PF16123 Hydroxyacylglutathione hydrolase C-terminus BRM84_05250 PF00075 RNase H BRM84_05255 PF00929 Exonuclease BRM84_05290 PF04717 Type VI secretion system, phage-baseplate injector BRM84_05290 PF16671 Actin cross-linking domain BRM84_05350 PF13356 Arm DNA-binding domain BRM84_05350 PF00589 Phage integrase family BRM84_05360 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BRM84_05370 PF12706 Beta-lactamase superfamily domain BRM84_05370 PF00753 Metallo-beta-lactamase superfamily BRM84_05375 PF06463 Molybdenum Cofactor Synthesis C BRM84_05375 PF04055 Radical SAM superfamily BRM84_05385 PF01967 MoaC family BRM84_05390 PF02597 ThiS family BRM84_05395 PF02391 MoaE protein BRM84_05410 PF12169 DNA polymerase III subunits gamma and tau domain III BRM84_05410 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BRM84_05410 PF12170 DNA polymerase III tau subunit V interacting with alpha BRM84_05415 PF02575 YbaB/EbfC DNA-binding family BRM84_05420 PF02132 RecR protein BRM84_05420 PF13662 Toprim domain BRM84_05425 PF01230 HIT domain BRM84_05435 PF01841 Transglutaminase-like superfamily BRM84_05435 PF13559 Domain of unknown function (DUF4129) BRM84_05435 PF11992 Domain of unknown function (DUF3488) BRM84_05445 PF17863 AAA lid domain BRM84_05445 PF07726 ATPase family associated with various cellular activities (AAA) BRM84_05465 PF01327 Polypeptide deformylase BRM84_05515 PF05598 Transposase domain (DUF772) BRM84_05515 PF01609 Transposase DDE domain BRM84_05545 PF00462 Glutaredoxin BRM84_05550 PF01522 Polysaccharide deacetylase BRM84_05575 PF03193 RsgA GTPase BRM84_05590 PF00128 Alpha amylase, catalytic domain BRM84_05610 PF00356 Bacterial regulatory proteins, lacI family BRM84_05615 PF00106 short chain dehydrogenase BRM84_05620 PF03600 Citrate transporter BRM84_05635 PF00072 Response regulator receiver domain BRM84_05635 PF00486 Transcriptional regulatory protein, C terminal BRM84_05640 PF00512 His Kinase A (phospho-acceptor) domain BRM84_05640 PF08521 Two-component sensor kinase N-terminal BRM84_05640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_05650 PF00196 Bacterial regulatory proteins, luxR family BRM84_05650 PF00072 Response regulator receiver domain BRM84_05670 PF03466 LysR substrate binding domain BRM84_05670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BRM84_05680 PF07690 Major Facilitator Superfamily BRM84_05685 PF00512 His Kinase A (phospho-acceptor) domain BRM84_05685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_05700 PF00375 Sodium:dicarboxylate symporter family BRM84_05705 PF01515 Phosphate acetyl/butaryl transferase BRM84_05705 PF03949 Malic enzyme, NAD binding domain BRM84_05705 PF00390 Malic enzyme, N-terminal domain BRM84_05740 PF02581 Thiamine monophosphate synthase BRM84_05745 PF00301 Rubredoxin BRM84_05750 PF13369 Transglutaminase-like superfamily BRM84_05760 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BRM84_05770 PF01812 5-formyltetrahydrofolate cyclo-ligase family BRM84_05780 PF05164 Cell division protein ZapA BRM84_05790 PF03695 Uncharacterised protein family (UPF0149) BRM84_05795 PF05195 Aminopeptidase P, N-terminal domain BRM84_05795 PF00557 Metallopeptidase family M24 BRM84_05815 PF00557 Metallopeptidase family M24 BRM84_05830 PF04055 Radical SAM superfamily BRM84_05830 PF06969 HemN C-terminal domain BRM84_05835 PF01725 Ham1 family BRM84_05845 PF03725 3' exoribonuclease family, domain 2 BRM84_05845 PF01138 3' exoribonuclease family, domain 1 BRM84_05850 PF08340 Domain of unknown function (DUF1732) BRM84_05850 PF03755 YicC-like family, N-terminal region BRM84_05855 PF00625 Guanylate kinase BRM84_05870 PF01192 RNA polymerase Rpb6 BRM84_05875 PF13291 ACT domain BRM84_05875 PF04607 Region found in RelA / SpoT proteins BRM84_05875 PF02824 TGS domain BRM84_05880 PF01042 Endoribonuclease L-PSP BRM84_05885 PF00270 DEAD/DEAH box helicase BRM84_05885 PF00271 Helicase conserved C-terminal domain BRM84_05885 PF17191 RecG wedge domain BRM84_05890 PF01156 Inosine-uridine preferring nucleoside hydrolase BRM84_05895 PF01197 Ribosomal protein L31 BRM84_05900 PF00285 Citrate synthase, C-terminal domain BRM84_05910 PF17092 Penicillin-binding protein OB-like domain BRM84_05910 PF00905 Penicillin binding protein transpeptidase domain BRM84_05910 PF00912 Transglycosylase BRM84_05935 PF07660 Secretin and TonB N terminus short domain BRM84_05935 PF11741 AMIN domain BRM84_05935 PF00263 Bacterial type II and III secretion system protein BRM84_05935 PF03958 Bacterial type II/III secretion system short domain BRM84_05960 PF07726 ATPase family associated with various cellular activities (AAA) BRM84_05960 PF17863 AAA lid domain BRM84_05980 PF00092 von Willebrand factor type A domain BRM84_05980 PF07584 Aerotolerance regulator N-terminal BRM84_06000 PF00375 Sodium:dicarboxylate symporter family BRM84_06005 PF02779 Transketolase, pyrimidine binding domain BRM84_06005 PF02780 Transketolase, C-terminal domain BRM84_06005 PF00456 Transketolase, thiamine diphosphate binding domain BRM84_06015 PF01551 Peptidase family M23 BRM84_06015 PF04225 Opacity-associated protein A LysM-like domain BRM84_06020 PF03734 L,D-transpeptidase catalytic domain BRM84_06020 PF01476 LysM domain BRM84_06045 PF00501 AMP-binding enzyme BRM84_06065 PF00072 Response regulator receiver domain BRM84_06065 PF00486 Transcriptional regulatory protein, C terminal BRM84_06070 PF08521 Two-component sensor kinase N-terminal BRM84_06070 PF00512 His Kinase A (phospho-acceptor) domain BRM84_06070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_06090 PF03459 TOBE domain BRM84_06090 PF00005 ABC transporter BRM84_06095 PF00528 Binding-protein-dependent transport system inner membrane component BRM84_06105 PF04273 Putative phosphatase (DUF442) BRM84_06105 PF00753 Metallo-beta-lactamase superfamily BRM84_06140 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BRM84_06140 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BRM84_06160 PF00672 HAMP domain BRM84_06160 PF00512 His Kinase A (phospho-acceptor) domain BRM84_06160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_06165 PF00486 Transcriptional regulatory protein, C terminal BRM84_06165 PF00072 Response regulator receiver domain BRM84_06175 PF08443 RimK-like ATP-grasp domain BRM84_06175 PF18030 RimK PreATP-grasp domain BRM84_06215 PF00027 Cyclic nucleotide-binding domain BRM84_06215 PF00520 Ion transport protein BRM84_06220 PF00202 Aminotransferase class-III BRM84_06235 PF01593 Flavin containing amine oxidoreductase BRM84_06240 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BRM84_06240 PF00034 Cytochrome c BRM84_06255 PF00127 Copper binding proteins, plastocyanin/azurin family BRM84_06265 PF00202 Aminotransferase class-III BRM84_06285 PF13333 Integrase core domain BRM84_06285 PF00665 Integrase core domain BRM84_06285 PF13276 HTH-like domain BRM84_06295 PF03377 TAL effector repeat BRM84_06310 PF03377 TAL effector repeat BRM84_06330 PF03377 TAL effector repeat BRM84_06350 PF01208 Uroporphyrinogen decarboxylase (URO-D) BRM84_06360 PF01761 3-dehydroquinate synthase BRM84_06365 PF01202 Shikimate kinase BRM84_06370 PF01243 Pyridoxamine 5'-phosphate oxidase BRM84_06370 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BRM84_06380 PF04012 PspA/IM30 family BRM84_06405 PF03738 Glutathionylspermidine synthase preATP-grasp BRM84_06420 PF00376 MerR family regulatory protein BRM84_06420 PF09278 MerR, DNA binding BRM84_06455 PF12706 Beta-lactamase superfamily domain BRM84_06475 PF00324 Amino acid permease BRM84_06480 PF00196 Bacterial regulatory proteins, luxR family BRM84_06485 PF00561 alpha/beta hydrolase fold BRM84_06495 PF00324 Amino acid permease BRM84_06515 PF01654 Cytochrome bd terminal oxidase subunit I BRM84_06520 PF02322 Cytochrome bd terminal oxidase subunit II BRM84_06525 PF00756 Putative esterase BRM84_06530 PF03448 MgtE intracellular N domain BRM84_06530 PF01769 Divalent cation transporter BRM84_06530 PF00571 CBS domain BRM84_06540 PF00391 PEP-utilising enzyme, mobile domain BRM84_06540 PF05524 PEP-utilising enzyme, N-terminal BRM84_06540 PF02896 PEP-utilising enzyme, TIM barrel domain BRM84_06545 PF00381 PTS HPr component phosphorylation site BRM84_06555 PF03668 P-loop ATPase protein family BRM84_06560 PF02603 HPr Serine kinase N terminus BRM84_06560 PF07475 HPr Serine kinase C-terminal domain BRM84_06565 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BRM84_06570 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BRM84_06575 PF04552 Sigma-54, DNA binding domain BRM84_06575 PF04963 Sigma-54 factor, core binding domain BRM84_06575 PF00309 Sigma-54 factor, Activator interacting domain (AID) BRM84_06580 PF00005 ABC transporter BRM84_06585 PF03968 OstA-like protein BRM84_06600 PF01380 SIS domain BRM84_06600 PF00571 CBS domain BRM84_06605 PF01722 BolA-like protein BRM84_06615 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BRM84_06635 PF00551 Formyl transferase BRM84_06650 PF02769 AIR synthase related protein, C-terminal domain BRM84_06650 PF00586 AIR synthase related protein, N-terminal domain BRM84_06660 PF01594 AI-2E family transporter BRM84_06665 PF00308 Bacterial dnaA protein BRM84_06670 PF00483 Nucleotidyl transferase BRM84_06675 PF01636 Phosphotransferase enzyme family BRM84_06690 PF07687 Peptidase dimerisation domain BRM84_06690 PF01546 Peptidase family M20/M25/M40 BRM84_06730 PF06964 Alpha-L-arabinofuranosidase C-terminal domain BRM84_06735 PF01263 Aldose 1-epimerase BRM84_06740 PF01578 Cytochrome C assembly protein BRM84_06750 PF00448 SRP54-type protein, GTPase domain BRM84_06750 PF02881 SRP54-type protein, helical bundle domain BRM84_06750 PF02978 Signal peptide binding domain BRM84_06765 PF03060 Nitronate monooxygenase BRM84_06775 PF00886 Ribosomal protein S16 BRM84_06780 PF05239 PRC-barrel domain BRM84_06780 PF01782 RimM N-terminal domain BRM84_06785 PF01746 tRNA (Guanine-1)-methyltransferase BRM84_06790 PF01245 Ribosomal protein L19 BRM84_06800 PF01554 MatE BRM84_06805 PF01479 S4 domain BRM84_06835 PF01541 GIY-YIG catalytic domain BRM84_06840 PF02861 Clp amino terminal domain, pathogenicity island component BRM84_06840 PF07724 AAA domain (Cdc48 subfamily) BRM84_06840 PF10431 C-terminal, D2-small domain, of ClpB protein BRM84_06840 PF00004 ATPase family associated with various cellular activities (AAA) BRM84_06840 PF17871 AAA lid domain BRM84_06880 PF07715 TonB-dependent Receptor Plug Domain BRM84_06880 PF00593 TonB dependent receptor BRM84_06905 PF12557 Cob(I)alamin adenosyltransferase N terminal BRM84_06905 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BRM84_06915 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BRM84_06920 PF02277 Phosphoribosyltransferase BRM84_06930 PF02654 Cobalamin-5-phosphate synthase BRM84_06940 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BRM84_06940 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BRM84_06950 PF07690 Major Facilitator Superfamily BRM84_06955 PF04183 IucA / IucC family BRM84_06955 PF06276 Ferric iron reductase FhuF-like transporter BRM84_06965 PF00593 TonB dependent receptor BRM84_06965 PF07660 Secretin and TonB N terminus short domain BRM84_06965 PF07715 TonB-dependent Receptor Plug Domain BRM84_06980 PF00999 Sodium/hydrogen exchanger family BRM84_06980 PF02254 TrkA-N domain BRM84_06990 PF00593 TonB dependent receptor BRM84_06990 PF07715 TonB-dependent Receptor Plug Domain BRM84_06995 PF00593 TonB dependent receptor BRM84_06995 PF07715 TonB-dependent Receptor Plug Domain BRM84_07010 PF07715 TonB-dependent Receptor Plug Domain BRM84_07010 PF00593 TonB dependent receptor BRM84_07015 PF00005 ABC transporter BRM84_07015 PF12848 ABC transporter BRM84_07030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BRM84_07030 PF03466 LysR substrate binding domain BRM84_07040 PF07859 alpha/beta hydrolase fold BRM84_07040 PF13472 GDSL-like Lipase/Acylhydrolase family BRM84_07060 PF12833 Helix-turn-helix domain BRM84_07095 PF00872 Transposase, Mutator family BRM84_07100 PF00120 Glutamine synthetase, catalytic domain BRM84_07105 PF04204 Homoserine O-succinyltransferase BRM84_07110 PF01810 LysE type translocator BRM84_07115 PF07722 Peptidase C26 BRM84_07125 PF01053 Cys/Met metabolism PLP-dependent enzyme BRM84_07160 PF00355 Rieske [2Fe-2S] domain BRM84_07175 PF00266 Aminotransferase class-V BRM84_07180 PF01458 Uncharacterized protein family (UPF0051) BRM84_07185 PF00005 ABC transporter BRM84_07190 PF01458 Uncharacterized protein family (UPF0051) BRM84_07195 PF02082 Transcriptional regulator BRM84_07215 PF01965 DJ-1/PfpI family BRM84_07255 PF03807 NADP oxidoreductase coenzyme F420-dependent BRM84_07255 PF14748 Pyrroline-5-carboxylate reductase dimerisation BRM84_07260 PF01168 Alanine racemase, N-terminal domain BRM84_07265 PF00437 Type II/IV secretion system protein BRM84_07270 PF00437 Type II/IV secretion system protein BRM84_07295 PF13673 Acetyltransferase (GNAT) domain BRM84_07295 PF00117 Glutamine amidotransferase class-I BRM84_07295 PF00958 GMP synthase C terminal domain BRM84_07295 PF13302 Acetyltransferase (GNAT) domain BRM84_07295 PF03352 Methyladenine glycosylase BRM84_07305 PF02622 Uncharacterized ACR, COG1678 BRM84_07310 PF03652 Holliday junction resolvase BRM84_07315 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BRM84_07315 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BRM84_07325 PF02566 OsmC-like protein BRM84_07335 PF02567 Phenazine biosynthesis-like protein BRM84_07345 PF01842 ACT domain BRM84_07345 PF00696 Amino acid kinase family BRM84_07360 PF08245 Mur ligase middle domain BRM84_07375 PF00348 Polyprenyl synthetase BRM84_07380 PF00436 Single-strand binding protein family BRM84_07385 PF00563 EAL domain BRM84_07385 PF01590 GAF domain BRM84_07385 PF00990 Diguanylate cyclase, GGDEF domain BRM84_07385 PF00360 Phytochrome region BRM84_07420 PF04328 Selenoprotein, putative BRM84_07425 PF13722 5TM C-terminal transporter carbon starvation CstA BRM84_07425 PF02554 Carbon starvation protein CstA BRM84_07430 PF02678 Pirin BRM84_07430 PF05726 Pirin C-terminal cupin domain BRM84_07440 PF04717 Type VI secretion system, phage-baseplate injector BRM84_07460 PF04717 Type VI secretion system, phage-baseplate injector BRM84_07490 PF04717 Type VI secretion system, phage-baseplate injector BRM84_07545 PF02678 Pirin BRM84_07545 PF05726 Pirin C-terminal cupin domain BRM84_07555 PF04493 Endonuclease V BRM84_07560 PF00300 Histidine phosphatase superfamily (branch 1) BRM84_07575 PF01431 Peptidase family M13 BRM84_07575 PF05649 Peptidase family M13 BRM84_07585 PF00072 Response regulator receiver domain BRM84_07585 PF01339 CheB methylesterase BRM84_07590 PF03705 CheR methyltransferase, all-alpha domain BRM84_07590 PF01739 CheR methyltransferase, SAM binding domain BRM84_07595 PF13426 PAS domain BRM84_07595 PF00990 Diguanylate cyclase, GGDEF domain BRM84_07595 PF00563 EAL domain BRM84_07600 PF01584 CheW-like domain BRM84_07605 PF00672 HAMP domain BRM84_07605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BRM84_07605 PF02203 Tar ligand binding domain homologue BRM84_07610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_07610 PF09078 CheY binding BRM84_07610 PF02895 Signal transducing histidine kinase, homodimeric domain BRM84_07610 PF01627 Hpt domain BRM84_07610 PF01584 CheW-like domain BRM84_07620 PF02559 CarD-like/TRCF domain BRM84_07620 PF00270 DEAD/DEAH box helicase BRM84_07620 PF17757 UvrB interaction domain BRM84_07620 PF03461 TRCF domain BRM84_07620 PF00271 Helicase conserved C-terminal domain BRM84_07630 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BRM84_07650 PF00672 HAMP domain BRM84_07650 PF00512 His Kinase A (phospho-acceptor) domain BRM84_07650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_07675 PF05598 Transposase domain (DUF772) BRM84_07675 PF01609 Transposase DDE domain BRM84_07700 PF05598 Transposase domain (DUF772) BRM84_07700 PF01609 Transposase DDE domain BRM84_07735 PF00749 tRNA synthetases class I (E and Q), catalytic domain BRM84_07740 PF01475 Ferric uptake regulator family BRM84_07790 PF00313 'Cold-shock' DNA-binding domain BRM84_07805 PF00899 ThiF family BRM84_07810 PF01026 TatD related DNase BRM84_07825 PF02770 Acyl-CoA dehydrogenase, middle domain BRM84_07825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BRM84_07825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BRM84_07835 PF13417 Glutathione S-transferase, N-terminal domain BRM84_07840 PF00733 Asparagine synthase BRM84_07840 PF13537 Glutamine amidotransferase domain BRM84_07845 PF03358 NADPH-dependent FMN reductase BRM84_07850 PF00772 DnaB-like helicase N terminal domain BRM84_07850 PF03796 DnaB-like helicase C terminal domain BRM84_07855 PF00875 DNA photolyase BRM84_07855 PF03441 FAD binding domain of DNA photolyase BRM84_07870 PF05736 OprF membrane domain BRM84_07870 PF00691 OmpA family BRM84_07905 PF00107 Zinc-binding dehydrogenase BRM84_07905 PF08240 Alcohol dehydrogenase GroES-like domain BRM84_07910 PF00654 Voltage gated chloride channel BRM84_07920 PF01609 Transposase DDE domain BRM84_07920 PF05598 Transposase domain (DUF772) BRM84_07925 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BRM84_07925 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BRM84_07930 PF12833 Helix-turn-helix domain BRM84_07930 PF02805 Metal binding domain of Ada BRM84_07930 PF06029 AlkA N-terminal domain BRM84_07930 PF00730 HhH-GPD superfamily base excision DNA repair protein BRM84_07975 PF00270 DEAD/DEAH box helicase BRM84_07975 PF00271 Helicase conserved C-terminal domain BRM84_07975 PF03880 DbpA RNA binding domain BRM84_07980 PF00563 EAL domain BRM84_07980 PF00990 Diguanylate cyclase, GGDEF domain BRM84_07980 PF08448 PAS fold BRM84_07985 PF00849 RNA pseudouridylate synthase BRM84_07985 PF01479 S4 domain BRM84_08010 PF03737 Aldolase/RraA BRM84_08015 PF00144 Beta-lactamase BRM84_08020 PF00999 Sodium/hydrogen exchanger family BRM84_08025 PF00512 His Kinase A (phospho-acceptor) domain BRM84_08025 PF00672 HAMP domain BRM84_08025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_08030 PF00486 Transcriptional regulatory protein, C terminal BRM84_08030 PF00072 Response regulator receiver domain BRM84_08035 PF02321 Outer membrane efflux protein BRM84_08050 PF00873 AcrB/AcrD/AcrF family BRM84_08060 PF00005 ABC transporter BRM84_08060 PF00664 ABC transporter transmembrane region BRM84_08085 PF05598 Transposase domain (DUF772) BRM84_08085 PF01609 Transposase DDE domain BRM84_08100 PF05598 Transposase domain (DUF772) BRM84_08100 PF01609 Transposase DDE domain BRM84_08140 PF01121 Dephospho-CoA kinase BRM84_08145 PF06750 Bacterial Peptidase A24 N-terminal domain BRM84_08145 PF01478 Type IV leader peptidase family BRM84_08150 PF00482 Type II secretion system (T2SS), protein F BRM84_08155 PF00114 Pilin (bacterial filament) BRM84_08155 PF07963 Prokaryotic N-terminal methylation motif BRM84_08160 PF00884 Sulfatase BRM84_08160 PF08019 Phosphoethanolamine transferase EptA/EptB BRM84_08175 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BRM84_08175 PF00437 Type II/IV secretion system protein BRM84_08190 PF00158 Sigma-54 interaction domain BRM84_08190 PF02954 Bacterial regulatory protein, Fis family BRM84_08190 PF00072 Response regulator receiver domain BRM84_08195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_08195 PF00512 His Kinase A (phospho-acceptor) domain BRM84_08200 PF08442 ATP-grasp domain BRM84_08200 PF00549 CoA-ligase BRM84_08205 PF02629 CoA binding domain BRM84_08205 PF00549 CoA-ligase BRM84_08220 PF02540 NAD synthase BRM84_08220 PF00795 Carbon-nitrogen hydrolase BRM84_08225 PF13525 Outer membrane lipoprotein BRM84_08230 PF00849 RNA pseudouridylate synthase BRM84_08250 PF00982 Glycosyltransferase family 20 BRM84_08255 PF00723 Glycosyl hydrolases family 15 BRM84_08260 PF02358 Trehalose-phosphatase BRM84_08270 PF07715 TonB-dependent Receptor Plug Domain BRM84_08270 PF00593 TonB dependent receptor BRM84_08300 PF04376 Arginine-tRNA-protein transferase, N terminus BRM84_08300 PF04377 Arginine-tRNA-protein transferase, C terminus BRM84_08320 PF04542 Sigma-70 region 2 BRM84_08320 PF08281 Sigma-70, region 4 BRM84_08335 PF00378 Enoyl-CoA hydratase/isomerase BRM84_08350 PF17760 UvrA interaction domain BRM84_08350 PF17755 UvrA DNA-binding domain BRM84_08350 PF00005 ABC transporter BRM84_08355 PF00829 Ribosomal prokaryotic L21 protein BRM84_08360 PF01016 Ribosomal L27 protein BRM84_08365 PF01018 GTP1/OBG BRM84_08365 PF01926 50S ribosome-binding GTPase BRM84_08370 PF01649 Ribosomal protein S20 BRM84_08375 PF03023 Lipid II flippase MurJ BRM84_08380 PF06574 FAD synthetase BRM84_08380 PF01687 Riboflavin kinase BRM84_08385 PF08264 Anticodon-binding domain of tRNA BRM84_08385 PF06827 Zinc finger found in FPG and IleRS BRM84_08385 PF00133 tRNA synthetases class I (I, L, M and V) BRM84_08390 PF01252 Signal peptidase (SPase) II BRM84_08395 PF02401 LytB protein BRM84_08405 PF06481 COX Aromatic Rich Motif BRM84_08405 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BRM84_08410 PF00115 Cytochrome C and Quinol oxidase polypeptide I BRM84_08415 PF00510 Cytochrome c oxidase subunit III BRM84_08420 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BRM84_08430 PF04717 Type VI secretion system, phage-baseplate injector BRM84_08440 PF03527 RHS protein BRM84_08440 PF05593 RHS Repeat BRM84_08440 PF05593 RHS Repeat BRM84_08440 PF14220 Domain of unknown function (DUF4329) BRM84_08440 PF14220 Domain of unknown function (DUF4329) BRM84_08440 PF03527 RHS protein BRM84_08470 PF00488 MutS domain V BRM84_08470 PF05190 MutS family domain IV BRM84_08470 PF05192 MutS domain III BRM84_08470 PF05188 MutS domain II BRM84_08470 PF01624 MutS domain I BRM84_08495 PF18073 Rubredoxin metal binding domain BRM84_08535 PF00152 tRNA synthetases class II (D, K and N) BRM84_08535 PF02938 GAD domain BRM84_08535 PF01336 OB-fold nucleic acid binding domain BRM84_08550 PF01709 Transcriptional regulator BRM84_08555 PF02075 Crossover junction endodeoxyribonuclease RuvC BRM84_08560 PF07499 RuvA, C-terminal domain BRM84_08560 PF01330 RuvA N terminal domain BRM84_08565 PF02705 K+ potassium transporter BRM84_08570 PF05496 Holliday junction DNA helicase RuvB P-loop domain BRM84_08570 PF17864 RuvB AAA lid domain BRM84_08570 PF05491 RuvB C-terminal winged helix domain BRM84_08575 PF03061 Thioesterase superfamily BRM84_08580 PF01618 MotA/TolQ/ExbB proton channel family BRM84_08585 PF02472 Biopolymer transport protein ExbD/TolR BRM84_08595 PF07676 WD40-like Beta Propeller Repeat BRM84_08595 PF04052 TolB amino-terminal domain BRM84_08600 PF00691 OmpA family BRM84_08610 PF04055 Radical SAM superfamily BRM84_08620 PF01479 S4 domain BRM84_08620 PF00849 RNA pseudouridylate synthase BRM84_08670 PF05598 Transposase domain (DUF772) BRM84_08680 PF06508 Queuosine biosynthesis protein QueC BRM84_08705 PF16124 RecQ zinc-binding BRM84_08705 PF00570 HRDC domain BRM84_08705 PF00271 Helicase conserved C-terminal domain BRM84_08705 PF00270 DEAD/DEAH box helicase BRM84_08705 PF09382 RQC domain BRM84_08715 PF00210 Ferritin-like domain BRM84_08720 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BRM84_08720 PF00271 Helicase conserved C-terminal domain BRM84_08720 PF04408 Helicase associated domain (HA2) BRM84_08720 PF00270 DEAD/DEAH box helicase BRM84_08720 PF11898 Domain of unknown function (DUF3418) BRM84_08750 PF04055 Radical SAM superfamily BRM84_08750 PF13186 Iron-sulfur cluster-binding domain BRM84_08755 PF05402 Coenzyme PQQ synthesis protein D (PqqD) BRM84_08760 PF03070 TENA/THI-4/PQQC family BRM84_08765 PF12706 Beta-lactamase superfamily domain BRM84_08770 PF08042 PqqA family BRM84_08775 PF02824 TGS domain BRM84_08775 PF13291 ACT domain BRM84_08775 PF04607 Region found in RelA / SpoT proteins BRM84_08785 PF00535 Glycosyl transferase family 2 BRM84_08790 PF00912 Transglycosylase BRM84_08790 PF14814 Bifunctional transglycosylase second domain BRM84_08790 PF00905 Penicillin binding protein transpeptidase domain BRM84_08800 PF04851 Type III restriction enzyme, res subunit BRM84_08800 PF13307 Helicase C-terminal domain BRM84_08805 PF00814 Glycoprotease family BRM84_08810 PF03747 ADP-ribosylglycohydrolase BRM84_08820 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BRM84_08820 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BRM84_08825 PF00072 Response regulator receiver domain BRM84_08830 PF00072 Response regulator receiver domain BRM84_08835 PF01584 CheW-like domain BRM84_08840 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BRM84_08840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BRM84_08845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_08845 PF01627 Hpt domain BRM84_08845 PF00072 Response regulator receiver domain BRM84_08845 PF01584 CheW-like domain BRM84_08860 PF13302 Acetyltransferase (GNAT) domain BRM84_08890 PF01112 Asparaginase BRM84_08895 PF03932 CutC family BRM84_08945 PF01301 Glycosyl hydrolases family 35 BRM84_08955 PF17678 Glycosyl hydrolase family 92 N-terminal domain BRM84_08955 PF07971 Glycosyl hydrolase family 92 BRM84_09005 PF05598 Transposase domain (DUF772) BRM84_09005 PF01609 Transposase DDE domain BRM84_09030 PF03412 Peptidase C39 family BRM84_09030 PF00664 ABC transporter transmembrane region BRM84_09030 PF00005 ABC transporter BRM84_09035 PF00933 Glycosyl hydrolase family 3 N terminal domain BRM84_09035 PF01915 Glycosyl hydrolase family 3 C-terminal domain BRM84_09035 PF07691 PA14 domain BRM84_09035 PF14310 Fibronectin type III-like domain BRM84_09055 PF01476 LysM domain BRM84_09055 PF00704 Glycosyl hydrolases family 18 BRM84_09070 PF02685 Glucokinase BRM84_09075 PF04452 RNA methyltransferase BRM84_09080 PF00202 Aminotransferase class-III BRM84_09085 PF00293 NUDIX domain BRM84_09090 PF00459 Inositol monophosphatase family BRM84_09095 PF03819 MazG nucleotide pyrophosphohydrolase domain BRM84_09110 PF01145 SPFH domain / Band 7 family BRM84_09110 PF16200 C-terminal region of band_7 BRM84_09120 PF08669 Glycine cleavage T-protein C-terminal barrel domain BRM84_09120 PF01571 Aminomethyltransferase folate-binding domain BRM84_09125 PF01597 Glycine cleavage H-protein BRM84_09160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BRM84_09160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BRM84_09160 PF09317 Domain of unknown function (DUF1974) BRM84_09170 PF00440 Bacterial regulatory proteins, tetR family BRM84_09175 PF07715 TonB-dependent Receptor Plug Domain BRM84_09175 PF00593 TonB dependent receptor BRM84_09185 PF01430 Hsp33 protein BRM84_09190 PF00912 Transglycosylase BRM84_09195 PF00535 Glycosyl transferase family 2 BRM84_09215 PF03006 Haemolysin-III related BRM84_09220 PF16658 Class II release factor RF3, C-terminal domain BRM84_09220 PF00009 Elongation factor Tu GTP binding domain BRM84_09225 PF01551 Peptidase family M23 BRM84_09225 PF01476 LysM domain BRM84_09225 PF08525 Opacity-associated protein A N-terminal motif BRM84_09230 PF00561 alpha/beta hydrolase fold BRM84_09235 PF01053 Cys/Met metabolism PLP-dependent enzyme BRM84_09245 PF03315 Serine dehydratase beta chain BRM84_09245 PF03313 Serine dehydratase alpha chain BRM84_09260 PF04264 YceI-like domain BRM84_09270 PF04264 YceI-like domain BRM84_09275 PF01627 Hpt domain BRM84_09275 PF00072 Response regulator receiver domain BRM84_09275 PF00672 HAMP domain BRM84_09275 PF17149 Periplasmic sensor domain found in signal transduction proteins BRM84_09275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_09275 PF00512 His Kinase A (phospho-acceptor) domain BRM84_09280 PF00072 Response regulator receiver domain BRM84_09280 PF00512 His Kinase A (phospho-acceptor) domain BRM84_09280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_09280 PF00672 HAMP domain BRM84_09280 PF17149 Periplasmic sensor domain found in signal transduction proteins BRM84_09280 PF01627 Hpt domain BRM84_09285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_09285 PF17149 Periplasmic sensor domain found in signal transduction proteins BRM84_09285 PF01627 Hpt domain BRM84_09285 PF00512 His Kinase A (phospho-acceptor) domain BRM84_09285 PF00672 HAMP domain BRM84_09285 PF00072 Response regulator receiver domain BRM84_09320 PF07745 Glycosyl hydrolase family 53 BRM84_09330 PF09856 Predicted transcriptional regulator (DUF2083) BRM84_09330 PF06114 IrrE N-terminal-like domain BRM84_09330 PF01381 Helix-turn-helix BRM84_09335 PF00171 Aldehyde dehydrogenase family BRM84_09340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BRM84_09340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BRM84_09340 PF02770 Acyl-CoA dehydrogenase, middle domain BRM84_09345 PF00378 Enoyl-CoA hydratase/isomerase BRM84_09350 PF00378 Enoyl-CoA hydratase/isomerase BRM84_09350 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BRM84_09350 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BRM84_09355 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BRM84_09355 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BRM84_09360 PF01545 Cation efflux family BRM84_09365 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BRM84_09365 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BRM84_09365 PF00378 Enoyl-CoA hydratase/isomerase BRM84_09370 PF08281 Sigma-70, region 4 BRM84_09370 PF04542 Sigma-70 region 2 BRM84_09380 PF13180 PDZ domain BRM84_09385 PF00679 Elongation factor G C-terminus BRM84_09385 PF03144 Elongation factor Tu domain 2 BRM84_09385 PF00009 Elongation factor Tu GTP binding domain BRM84_09385 PF06421 GTP-binding protein LepA C-terminus BRM84_09390 PF10502 Signal peptidase, peptidase S26 BRM84_09400 PF00035 Double-stranded RNA binding motif BRM84_09400 PF14622 Ribonuclease-III-like BRM84_09405 PF07650 KH domain BRM84_09405 PF01926 50S ribosome-binding GTPase BRM84_09410 PF11967 Recombination protein O N terminal BRM84_09410 PF02565 Recombination protein O C terminal BRM84_09420 PF05958 tRNA (Uracil-5-)-methyltransferase BRM84_09435 PF05598 Transposase domain (DUF772) BRM84_09440 PF01323 DSBA-like thioredoxin domain BRM84_09445 PF01593 Flavin containing amine oxidoreductase BRM84_09450 PF04244 Deoxyribodipyrimidine photo-lyase-related protein BRM84_09455 PF00933 Glycosyl hydrolase family 3 N terminal domain BRM84_09465 PF01048 Phosphorylase superfamily BRM84_09470 PF00313 'Cold-shock' DNA-binding domain BRM84_09490 PF00270 DEAD/DEAH box helicase BRM84_09490 PF08494 DEAD/H associated BRM84_09490 PF00271 Helicase conserved C-terminal domain BRM84_09495 PF01068 ATP dependent DNA ligase domain BRM84_09495 PF04675 DNA ligase N terminus BRM84_09495 PF04679 ATP dependent DNA ligase C terminal region BRM84_09505 PF04675 DNA ligase N terminus BRM84_09505 PF01068 ATP dependent DNA ligase domain BRM84_09505 PF04679 ATP dependent DNA ligase C terminal region BRM84_09520 PF00072 Response regulator receiver domain BRM84_09520 PF00990 Diguanylate cyclase, GGDEF domain BRM84_09535 PF02803 Thiolase, C-terminal domain BRM84_09535 PF00108 Thiolase, N-terminal domain BRM84_09540 PF00082 Subtilase family BRM84_09540 PF12951 Passenger-associated-transport-repeat BRM84_09540 PF03797 Autotransporter beta-domain BRM84_09545 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BRM84_09545 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BRM84_09560 PF01863 Protein of unknown function DUF45 BRM84_09565 PF07043 Protein of unknown function (DUF1328) BRM84_09575 PF01258 Prokaryotic dksA/traR C4-type zinc finger BRM84_09620 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BRM84_09635 PF03831 PhnA domain BRM84_09635 PF08274 PhnA Zinc-Ribbon BRM84_09650 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BRM84_09655 PF07690 Major Facilitator Superfamily BRM84_09710 PF09924 Uncharacterised conserved protein (DUF2156) BRM84_09710 PF03706 Lysylphosphatidylglycerol synthase TM region BRM84_09720 PF01042 Endoribonuclease L-PSP BRM84_09765 PF04542 Sigma-70 region 2 BRM84_09765 PF04545 Sigma-70, region 4 BRM84_09785 PF04060 Putative Fe-S cluster BRM84_09795 PF01588 Putative tRNA binding domain BRM84_09795 PF09334 tRNA synthetases class I (M) BRM84_09815 PF00324 Amino acid permease BRM84_09820 PF02574 Homocysteine S-methyltransferase BRM84_09835 PF02592 Putative vitamin uptake transporter BRM84_09850 PF05598 Transposase domain (DUF772) BRM84_09870 PF00009 Elongation factor Tu GTP binding domain BRM84_09940 PF00005 ABC transporter BRM84_09940 PF13732 Domain of unknown function (DUF4162) BRM84_09945 PF07715 TonB-dependent Receptor Plug Domain BRM84_09945 PF00593 TonB dependent receptor BRM84_09955 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BRM84_09960 PF07733 Bacterial DNA polymerase III alpha NTPase domain BRM84_09960 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BRM84_09960 PF01336 OB-fold nucleic acid binding domain BRM84_09960 PF14579 Helix-hairpin-helix motif BRM84_09960 PF02811 PHP domain BRM84_09965 PF01351 Ribonuclease HII BRM84_09970 PF02684 Lipid-A-disaccharide synthetase BRM84_09975 PF00132 Bacterial transferase hexapeptide (six repeats) BRM84_09975 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BRM84_09980 PF07977 FabA-like domain BRM84_09985 PF00132 Bacterial transferase hexapeptide (six repeats) BRM84_09985 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BRM84_09995 PF01103 Surface antigen BRM84_09995 PF07244 Surface antigen variable number repeat BRM84_10000 PF17820 PDZ domain BRM84_10000 PF02163 Peptidase family M50 BRM84_10005 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BRM84_10005 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BRM84_10005 PF13288 DXP reductoisomerase C-terminal domain BRM84_10015 PF01255 Putative undecaprenyl diphosphate synthase BRM84_10020 PF01765 Ribosome recycling factor BRM84_10025 PF00696 Amino acid kinase family BRM84_10035 PF00889 Elongation factor TS BRM84_10040 PF00318 Ribosomal protein S2 BRM84_10075 PF00557 Metallopeptidase family M24 BRM84_10080 PF01966 HD domain BRM84_10080 PF08335 GlnD PII-uridylyltransferase BRM84_10080 PF01909 Nucleotidyltransferase domain BRM84_10085 PF14602 Hexapeptide repeat of succinyl-transferase BRM84_10085 PF00132 Bacterial transferase hexapeptide (six repeats) BRM84_10085 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BRM84_10095 PF03960 ArsC family BRM84_10105 PF07687 Peptidase dimerisation domain BRM84_10105 PF01546 Peptidase family M20/M25/M40 BRM84_10110 PF13537 Glutamine amidotransferase domain BRM84_10110 PF00733 Asparagine synthase BRM84_10125 PF00593 TonB dependent receptor BRM84_10125 PF07715 TonB-dependent Receptor Plug Domain BRM84_10130 PF01804 Penicillin amidase BRM84_10135 PF00210 Ferritin-like domain BRM84_10145 PF00521 DNA gyrase/topoisomerase IV, subunit A BRM84_10145 PF03989 DNA gyrase C-terminal domain, beta-propeller BRM84_10160 PF02321 Outer membrane efflux protein BRM84_10165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BRM84_10165 PF00529 HlyD membrane-fusion protein of T1SS BRM84_10170 PF07690 Major Facilitator Superfamily BRM84_10215 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BRM84_10215 PF02779 Transketolase, pyrimidine binding domain BRM84_10215 PF02780 Transketolase, C-terminal domain BRM84_10225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BRM84_10225 PF02770 Acyl-CoA dehydrogenase, middle domain BRM84_10225 PF12806 Acetyl-CoA dehydrogenase C-terminal like BRM84_10225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BRM84_10240 PF01668 SmpB protein BRM84_10245 PF03364 Polyketide cyclase / dehydrase and lipid transport BRM84_10250 PF03658 RnfH family Ubiquitin BRM84_10260 PF04355 SmpA / OmlA family BRM84_10265 PF01475 Ferric uptake regulator family BRM84_10270 PF02463 RecF/RecN/SMC N terminal domain BRM84_10275 PF01628 HrcA protein C terminal domain BRM84_10275 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding BRM84_10280 PF01025 GrpE BRM84_10285 PF00012 Hsp70 protein BRM84_10290 PF01556 DnaJ C terminal domain BRM84_10290 PF00684 DnaJ central domain BRM84_10290 PF00226 DnaJ domain BRM84_10300 PF08543 Phosphomethylpyrimidine kinase BRM84_10305 PF02153 Prephenate dehydrogenase BRM84_10305 PF01817 Chorismate mutase type II BRM84_10325 PF03466 LysR substrate binding domain BRM84_10325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BRM84_10340 PF00664 ABC transporter transmembrane region BRM84_10340 PF00005 ABC transporter BRM84_10345 PF01205 Uncharacterized protein family UPF0029 BRM84_10350 PF03641 Possible lysine decarboxylase BRM84_10355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BRM84_10355 PF07992 Pyridine nucleotide-disulphide oxidoreductase BRM84_10360 PF02817 e3 binding domain BRM84_10360 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BRM84_10360 PF00364 Biotin-requiring enzyme BRM84_10365 PF00676 Dehydrogenase E1 component BRM84_10365 PF16078 2-oxoglutarate dehydrogenase N-terminus BRM84_10365 PF02779 Transketolase, pyrimidine binding domain BRM84_10365 PF16870 2-oxoglutarate dehydrogenase C-terminal BRM84_10375 PF08007 Cupin superfamily protein BRM84_10395 PF08328 Adenylosuccinate lyase C-terminal BRM84_10395 PF00206 Lyase BRM84_10425 PF00206 Lyase BRM84_10425 PF10415 Fumarase C C-terminus BRM84_10455 PF00005 ABC transporter BRM84_10460 PF00392 Bacterial regulatory proteins, gntR family BRM84_10470 PF00255 Glutathione peroxidase BRM84_10475 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BRM84_10475 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BRM84_10480 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BRM84_10480 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BRM84_10480 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BRM84_10485 PF04102 SlyX BRM84_10505 PF07690 Major Facilitator Superfamily BRM84_10510 PF00294 pfkB family carbohydrate kinase BRM84_10520 PF02574 Homocysteine S-methyltransferase BRM84_10520 PF00809 Pterin binding enzyme BRM84_10520 PF02965 Vitamin B12 dependent methionine synthase, activation domain BRM84_10520 PF02607 B12 binding domain BRM84_10520 PF02310 B12 binding domain BRM84_10525 PF02574 Homocysteine S-methyltransferase BRM84_10525 PF00809 Pterin binding enzyme BRM84_10530 PF01209 ubiE/COQ5 methyltransferase family BRM84_10535 PF02770 Acyl-CoA dehydrogenase, middle domain BRM84_10535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BRM84_10535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BRM84_10565 PF08461 Ribonuclease R winged-helix domain BRM84_10565 PF08206 Ribonuclease B OB domain BRM84_10565 PF00773 RNB domain BRM84_10565 PF17876 Cold shock domain BRM84_10565 PF00575 S1 RNA binding domain BRM84_10585 PF08032 RNA 2'-O ribose methyltransferase substrate binding BRM84_10585 PF00588 SpoU rRNA Methylase family BRM84_10600 PF01609 Transposase DDE domain BRM84_10600 PF05598 Transposase domain (DUF772) BRM84_10625 PF00872 Transposase, Mutator family BRM84_10635 PF00313 'Cold-shock' DNA-binding domain BRM84_10640 PF00561 alpha/beta hydrolase fold BRM84_10650 PF05598 Transposase domain (DUF772) BRM84_10650 PF01609 Transposase DDE domain BRM84_10655 PF05598 Transposase domain (DUF772) BRM84_10655 PF01609 Transposase DDE domain BRM84_10680 PF03544 Gram-negative bacterial TonB protein C-terminal BRM84_10685 PF02403 Seryl-tRNA synthetase N-terminal domain BRM84_10685 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BRM84_10705 PF05598 Transposase domain (DUF772) BRM84_10705 PF01609 Transposase DDE domain BRM84_10710 PF02525 Flavodoxin-like fold BRM84_10715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BRM84_10715 PF03466 LysR substrate binding domain BRM84_10735 PF03377 TAL effector repeat BRM84_10755 PF03377 TAL effector repeat BRM84_10775 PF03377 TAL effector repeat BRM84_10810 PF03079 ARD/ARD' family BRM84_10815 PF00596 Class II Aldolase and Adducin N-terminal domain BRM84_10820 PF13520 Amino acid permease BRM84_10825 PF13520 Amino acid permease BRM84_10835 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BRM84_10835 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BRM84_10840 PF02913 FAD linked oxidases, C-terminal domain BRM84_10840 PF01565 FAD binding domain BRM84_10865 PF03918 Cytochrome C biogenesis protein BRM84_10870 PF08534 Redoxin BRM84_10875 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BRM84_10875 PF01578 Cytochrome C assembly protein BRM84_10880 PF03100 CcmE BRM84_10890 PF01578 Cytochrome C assembly protein BRM84_10895 PF03379 CcmB protein BRM84_10900 PF00005 ABC transporter BRM84_10905 PF00155 Aminotransferase class I and II BRM84_10910 PF00795 Carbon-nitrogen hydrolase BRM84_10930 PF00849 RNA pseudouridylate synthase BRM84_10930 PF01479 S4 domain BRM84_10935 PF04079 Segregation and condensation complex subunit ScpB BRM84_10940 PF02616 Segregation and condensation protein ScpA BRM84_10945 PF03795 YCII-related domain BRM84_10955 PF00356 Bacterial regulatory proteins, lacI family BRM84_10975 PF00528 Binding-protein-dependent transport system inner membrane component BRM84_10980 PF00528 Binding-protein-dependent transport system inner membrane component BRM84_11005 PF00795 Carbon-nitrogen hydrolase BRM84_11015 PF04371 Porphyromonas-type peptidyl-arginine deiminase BRM84_11025 PF00444 Ribosomal protein L36 BRM84_11030 PF02224 Cytidylate kinase BRM84_11035 PF00575 S1 RNA binding domain BRM84_11040 PF00216 Bacterial DNA-binding protein BRM84_11050 PF18073 Rubredoxin metal binding domain BRM84_11055 PF00953 Glycosyl transferase family 4 BRM84_11060 PF02719 Polysaccharide biosynthesis protein BRM84_11065 PF00483 Nucleotidyl transferase BRM84_11085 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BRM84_11085 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BRM84_11090 PF00478 IMP dehydrogenase / GMP reductase domain BRM84_11090 PF00571 CBS domain BRM84_11095 PF02540 NAD synthase BRM84_11095 PF00958 GMP synthase C terminal domain BRM84_11095 PF00117 Glutamine amidotransferase class-I BRM84_11100 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BRM84_11105 PF00361 Proton-conducting membrane transporter BRM84_11105 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BRM84_11105 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus BRM84_11110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BRM84_11110 PF03466 LysR substrate binding domain BRM84_11135 PF03601 Conserved hypothetical protein 698 BRM84_11140 PF03466 LysR substrate binding domain BRM84_11140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BRM84_11155 PF00072 Response regulator receiver domain BRM84_11165 PF01566 Natural resistance-associated macrophage protein BRM84_11170 PF02742 Iron dependent repressor, metal binding and dimerisation domain BRM84_11170 PF01325 Iron dependent repressor, N-terminal DNA binding domain BRM84_11175 PF14437 MafB19-like deaminase BRM84_11180 PF00929 Exonuclease BRM84_11185 PF00924 Mechanosensitive ion channel BRM84_11185 PF05552 Conserved TM helix BRM84_11190 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BRM84_11190 PF00391 PEP-utilising enzyme, mobile domain BRM84_11190 PF02896 PEP-utilising enzyme, TIM barrel domain BRM84_11195 PF03618 Kinase/pyrophosphorylase BRM84_11225 PF05598 Transposase domain (DUF772) BRM84_11225 PF01609 Transposase DDE domain BRM84_11250 PF01066 CDP-alcohol phosphatidyltransferase BRM84_11260 PF00561 alpha/beta hydrolase fold BRM84_11275 PF01266 FAD dependent oxidoreductase BRM84_11275 PF00355 Rieske [2Fe-2S] domain BRM84_11285 PF00575 S1 RNA binding domain BRM84_11285 PF17674 HHH domain BRM84_11285 PF16921 Tex protein YqgF-like domain BRM84_11285 PF09371 Tex-like protein N-terminal domain BRM84_11300 PF00072 Response regulator receiver domain BRM84_11310 PF04551 GcpE protein BRM84_11315 PF01569 PAP2 superfamily BRM84_11325 PF07690 Major Facilitator Superfamily BRM84_11340 PF01177 Asp/Glu/Hydantoin racemase BRM84_11350 PF00892 EamA-like transporter family BRM84_11355 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BRM84_11355 PF01565 FAD binding domain BRM84_11360 PF01180 Dihydroorotate dehydrogenase BRM84_11375 PF00171 Aldehyde dehydrogenase family BRM84_11390 PF13840 ACT domain BRM84_11390 PF00696 Amino acid kinase family BRM84_11390 PF03447 Homoserine dehydrogenase, NAD binding domain BRM84_11390 PF01842 ACT domain BRM84_11390 PF00742 Homoserine dehydrogenase BRM84_11395 PF08544 GHMP kinases C terminal BRM84_11395 PF00288 GHMP kinases N terminal domain BRM84_11410 PF00291 Pyridoxal-phosphate dependent enzyme BRM84_11410 PF14821 Threonine synthase N terminus BRM84_11425 PF13393 Histidyl-tRNA synthetase BRM84_11425 PF03129 Anticodon binding domain BRM84_11445 PF08029 HisG, C-terminal domain BRM84_11445 PF01634 ATP phosphoribosyltransferase BRM84_11450 PF00815 Histidinol dehydrogenase BRM84_11455 PF00155 Aminotransferase class I and II BRM84_11460 PF00475 Imidazoleglycerol-phosphate dehydratase BRM84_11465 PF00117 Glutamine amidotransferase class-I BRM84_11470 PF00977 Histidine biosynthesis protein BRM84_11475 PF00977 Histidine biosynthesis protein BRM84_11480 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BRM84_11480 PF01502 Phosphoribosyl-AMP cyclohydrolase BRM84_11490 PF03377 TAL effector repeat BRM84_11505 PF03377 TAL effector repeat BRM84_11520 PF01043 SecA preprotein cross-linking domain BRM84_11520 PF07517 SecA DEAD-like domain BRM84_11520 PF02810 SEC-C motif BRM84_11520 PF07516 SecA Wing and Scaffold domain BRM84_11525 PF01609 Transposase DDE domain BRM84_11525 PF05598 Transposase domain (DUF772) BRM84_11630 PF02303 Helix-destabilising protein BRM84_11710 PF03377 TAL effector repeat BRM84_11725 PF03377 TAL effector repeat BRM84_11745 PF03377 TAL effector repeat BRM84_11755 PF13333 Integrase core domain BRM84_11755 PF00665 Integrase core domain BRM84_11755 PF13276 HTH-like domain BRM84_11770 PF05598 Transposase domain (DUF772) BRM84_11770 PF01609 Transposase DDE domain BRM84_11795 PF00872 Transposase, Mutator family BRM84_11805 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BRM84_11825 PF01066 CDP-alcohol phosphatidyltransferase BRM84_11830 PF08459 UvrC Helix-hairpin-helix N-terminal BRM84_11830 PF02151 UvrB/uvrC motif BRM84_11830 PF01541 GIY-YIG catalytic domain BRM84_11840 PF01451 Low molecular weight phosphotyrosine protein phosphatase BRM84_11845 PF02348 Cytidylyltransferase BRM84_11850 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BRM84_11855 PF00664 ABC transporter transmembrane region BRM84_11855 PF00005 ABC transporter BRM84_11865 PF01618 MotA/TolQ/ExbB proton channel family BRM84_11870 PF00753 Metallo-beta-lactamase superfamily BRM84_11870 PF03772 Competence protein BRM84_11890 PF00005 ABC transporter BRM84_11895 PF02687 FtsX-like permease family BRM84_11895 PF12704 MacB-like periplasmic core domain BRM84_11905 PF03937 Flavinator of succinate dehydrogenase BRM84_11910 PF13085 2Fe-2S iron-sulfur cluster binding domain BRM84_11920 PF02910 Fumarate reductase flavoprotein C-term BRM84_11920 PF00890 FAD binding domain BRM84_11925 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BRM84_11930 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BRM84_11940 PF01571 Aminomethyltransferase folate-binding domain BRM84_11950 PF17912 MalK OB fold domain BRM84_11950 PF00005 ABC transporter BRM84_11955 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BRM84_11955 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BRM84_11960 PF02685 Glucokinase BRM84_11965 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BRM84_11970 PF00920 Dehydratase family BRM84_11975 PF01081 KDPG and KHG aldolase BRM84_12005 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BRM84_12005 PF00512 His Kinase A (phospho-acceptor) domain BRM84_12005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_12005 PF00072 Response regulator receiver domain BRM84_12005 PF01627 Hpt domain BRM84_12005 PF00672 HAMP domain BRM84_12035 PF00990 Diguanylate cyclase, GGDEF domain BRM84_12035 PF08448 PAS fold BRM84_12055 PF02253 Phospholipase A1 BRM84_12070 PF05681 Fumarate hydratase (Fumerase) BRM84_12070 PF05683 Fumarase C-terminus BRM84_12075 PF00005 ABC transporter BRM84_12080 PF00970 Oxidoreductase FAD-binding domain BRM84_12080 PF00175 Oxidoreductase NAD-binding domain BRM84_12085 PF00255 Glutathione peroxidase BRM84_12115 PF04542 Sigma-70 region 2 BRM84_12115 PF08281 Sigma-70, region 4 BRM84_12125 PF12802 MarR family BRM84_12160 PF14310 Fibronectin type III-like domain BRM84_12160 PF00933 Glycosyl hydrolase family 3 N terminal domain BRM84_12160 PF01915 Glycosyl hydrolase family 3 C-terminal domain BRM84_12175 PF00990 Diguanylate cyclase, GGDEF domain BRM84_12175 PF01590 GAF domain BRM84_12175 PF00563 EAL domain BRM84_12175 PF00360 Phytochrome region BRM84_12185 PF00474 Sodium:solute symporter family BRM84_12195 PF00933 Glycosyl hydrolase family 3 N terminal domain BRM84_12195 PF14310 Fibronectin type III-like domain BRM84_12195 PF01915 Glycosyl hydrolase family 3 C-terminal domain BRM84_12220 PF00342 Phosphoglucose isomerase BRM84_12225 PF02261 Aspartate decarboxylase BRM84_12230 PF02569 Pantoate-beta-alanine ligase BRM84_12235 PF02548 Ketopantoate hydroxymethyltransferase BRM84_12240 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BRM84_12245 PF12627 Probable RNA and SrmB- binding site of polymerase A BRM84_12245 PF12626 Polymerase A arginine-rich C-terminus BRM84_12245 PF01743 Poly A polymerase head domain BRM84_12255 PF02649 Type I GTP cyclohydrolase folE2 BRM84_12260 PF01520 N-acetylmuramoyl-L-alanine amidase BRM84_12275 PF05598 Transposase domain (DUF772) BRM84_12280 PF00082 Subtilase family BRM84_12280 PF03797 Autotransporter beta-domain BRM84_12290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BRM84_12295 PF00873 AcrB/AcrD/AcrF family BRM84_12300 PF02321 Outer membrane efflux protein BRM84_12305 PF00072 Response regulator receiver domain BRM84_12305 PF13426 PAS domain BRM84_12305 PF00512 His Kinase A (phospho-acceptor) domain BRM84_12305 PF08448 PAS fold BRM84_12305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_12310 PF00072 Response regulator receiver domain BRM84_12310 PF00196 Bacterial regulatory proteins, luxR family BRM84_12315 PF12951 Passenger-associated-transport-repeat BRM84_12350 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BRM84_12355 PF01842 ACT domain BRM84_12355 PF01817 Chorismate mutase type II BRM84_12355 PF00800 Prephenate dehydratase BRM84_12360 PF00266 Aminotransferase class-V BRM84_12365 PF00174 Oxidoreductase molybdopterin binding domain BRM84_12375 PF01794 Ferric reductase like transmembrane component BRM84_12400 PF00392 Bacterial regulatory proteins, gntR family BRM84_12400 PF07702 UTRA domain BRM84_12410 PF07969 Amidohydrolase family BRM84_12415 PF00221 Aromatic amino acid lyase BRM84_12425 PF17391 Urocanase N-terminal domain BRM84_12425 PF01175 Urocanase Rossmann-like domain BRM84_12425 PF17392 Urocanase C-terminal domain BRM84_12445 PF00521 DNA gyrase/topoisomerase IV, subunit A BRM84_12445 PF03989 DNA gyrase C-terminal domain, beta-propeller BRM84_12450 PF01008 Initiation factor 2 subunit family BRM84_12465 PF00152 tRNA synthetases class II (D, K and N) BRM84_12470 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BRM84_12470 PF00533 BRCA1 C Terminus (BRCT) domain BRM84_12470 PF03120 NAD-dependent DNA ligase OB-fold domain BRM84_12470 PF01653 NAD-dependent DNA ligase adenylation domain BRM84_12470 PF12826 Helix-hairpin-helix motif BRM84_12480 PF04354 ZipA, C-terminal FtsZ-binding domain BRM84_12485 PF02463 RecF/RecN/SMC N terminal domain BRM84_12490 PF03948 Ribosomal protein L9, C-terminal domain BRM84_12490 PF01281 Ribosomal protein L9, N-terminal domain BRM84_12495 PF01084 Ribosomal protein S18 BRM84_12500 PF01250 Ribosomal protein S6 BRM84_12505 PF01521 Iron-sulphur cluster biosynthesis BRM84_12515 PF00152 tRNA synthetases class II (D, K and N) BRM84_12515 PF01336 OB-fold nucleic acid binding domain BRM84_12540 PF00484 Carbonic anhydrase BRM84_12545 PF06052 3-hydroxyanthranilic acid dioxygenase BRM84_12555 PF00266 Aminotransferase class-V BRM84_12560 PF01494 FAD binding domain BRM84_12565 PF00929 Exonuclease BRM84_12565 PF08411 Exonuclease C-terminal BRM84_12575 PF00248 Aldo/keto reductase family BRM84_12590 PF01513 ATP-NAD kinase BRM84_12600 PF10672 S-adenosylmethionine-dependent methyltransferase BRM84_12600 PF02926 THUMP domain BRM84_12600 PF01170 Putative RNA methylase family UPF0020 BRM84_12640 PF00581 Rhodanese-like domain BRM84_12645 PF00293 NUDIX domain BRM84_12650 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BRM84_12650 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BRM84_12655 PF00378 Enoyl-CoA hydratase/isomerase BRM84_12665 PF00633 Helix-hairpin-helix motif BRM84_12665 PF10576 Iron-sulfur binding domain of endonuclease III BRM84_12665 PF00730 HhH-GPD superfamily base excision DNA repair protein BRM84_12675 PF00484 Carbonic anhydrase BRM84_12680 PF05598 Transposase domain (DUF772) BRM84_12680 PF01609 Transposase DDE domain BRM84_12715 PF12849 PBP superfamily domain BRM84_12720 PF12849 PBP superfamily domain BRM84_12725 PF00528 Binding-protein-dependent transport system inner membrane component BRM84_12730 PF00528 Binding-protein-dependent transport system inner membrane component BRM84_12735 PF00005 ABC transporter BRM84_12740 PF01895 PhoU domain BRM84_12750 PF00929 Exonuclease BRM84_12765 PF00872 Transposase, Mutator family BRM84_12795 PF00589 Phage integrase family BRM84_12795 PF13495 Phage integrase, N-terminal SAM-like domain BRM84_12800 PF02355 Protein export membrane protein BRM84_12800 PF07549 SecD/SecF GG Motif BRM84_12805 PF07549 SecD/SecF GG Motif BRM84_12805 PF02355 Protein export membrane protein BRM84_12805 PF13721 SecD export protein N-terminal TM region BRM84_12810 PF02699 Preprotein translocase subunit BRM84_12815 PF01702 Queuine tRNA-ribosyltransferase BRM84_12820 PF02547 Queuosine biosynthesis protein BRM84_12910 PF00037 4Fe-4S binding domain BRM84_12925 PF01467 Cytidylyltransferase-like BRM84_12935 PF00183 Hsp90 protein BRM84_12935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_12950 PF00899 ThiF family BRM84_12965 PF05598 Transposase domain (DUF772) BRM84_12980 PF01609 Transposase DDE domain BRM84_12980 PF05598 Transposase domain (DUF772) BRM84_12990 PF05598 Transposase domain (DUF772) BRM84_12990 PF01609 Transposase DDE domain BRM84_13020 PF00994 Probable molybdopterin binding domain BRM84_13020 PF03453 MoeA N-terminal region (domain I and II) BRM84_13020 PF03454 MoeA C-terminal region (domain IV) BRM84_13025 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BRM84_13025 PF01926 50S ribosome-binding GTPase BRM84_13030 PF13360 PQQ-like domain BRM84_13030 PF01011 PQQ enzyme repeat BRM84_13040 PF13464 Domain of unknown function (DUF4115) BRM84_13050 PF04055 Radical SAM superfamily BRM84_13055 PF00334 Nucleoside diphosphate kinase BRM84_13065 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BRM84_13065 PF00378 Enoyl-CoA hydratase/isomerase BRM84_13065 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BRM84_13070 PF00108 Thiolase, N-terminal domain BRM84_13070 PF02803 Thiolase, C-terminal domain BRM84_13075 PF00654 Voltage gated chloride channel BRM84_13085 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BRM84_13095 PF12002 MgsA AAA+ ATPase C terminal BRM84_13095 PF16193 AAA C-terminal domain BRM84_13095 PF00004 ATPase family associated with various cellular activities (AAA) BRM84_13110 PF03548 Outer membrane lipoprotein carrier protein LolA BRM84_13120 PF01580 FtsK/SpoIIIE family BRM84_13120 PF09397 Ftsk gamma domain BRM84_13120 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BRM84_13120 PF17854 FtsK alpha domain BRM84_13125 PF07992 Pyridine nucleotide-disulphide oxidoreductase BRM84_13140 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BRM84_13145 PF01176 Translation initiation factor 1A / IF-1 BRM84_13150 PF00004 ATPase family associated with various cellular activities (AAA) BRM84_13150 PF07724 AAA domain (Cdc48 subfamily) BRM84_13150 PF17871 AAA lid domain BRM84_13150 PF02861 Clp amino terminal domain, pathogenicity island component BRM84_13150 PF10431 C-terminal, D2-small domain, of ClpB protein BRM84_13155 PF02617 ATP-dependent Clp protease adaptor protein ClpS BRM84_13160 PF00293 NUDIX domain BRM84_13170 PF04356 Protein of unknown function (DUF489) BRM84_13175 PF12729 Four helix bundle sensory module for signal transduction BRM84_13175 PF00672 HAMP domain BRM84_13175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BRM84_13190 PF00563 EAL domain BRM84_13190 PF08447 PAS fold BRM84_13190 PF00990 Diguanylate cyclase, GGDEF domain BRM84_13190 PF08448 PAS fold BRM84_13195 PF07730 Histidine kinase BRM84_13195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_13200 PF03707 Bacterial signalling protein N terminal repeat BRM84_13200 PF00563 EAL domain BRM84_13200 PF00990 Diguanylate cyclase, GGDEF domain BRM84_13205 PF00512 His Kinase A (phospho-acceptor) domain BRM84_13205 PF13426 PAS domain BRM84_13205 PF00989 PAS fold BRM84_13205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_13205 PF13188 PAS domain BRM84_13225 PF01584 CheW-like domain BRM84_13225 PF00072 Response regulator receiver domain BRM84_13235 PF00460 Flagella basal body rod protein BRM84_13235 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BRM84_13240 PF03963 Flagellar hook capping protein - N-terminal region BRM84_13245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BRM84_13245 PF00460 Flagella basal body rod protein BRM84_13245 PF07559 Flagellar basal body protein FlaE BRM84_13250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BRM84_13250 PF00460 Flagella basal body rod protein BRM84_13260 PF00460 Flagella basal body rod protein BRM84_13260 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BRM84_13265 PF02107 Flagellar L-ring protein BRM84_13270 PF02119 Flagellar P-ring protein BRM84_13275 PF10135 Rod binding protein BRM84_13275 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BRM84_13280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BRM84_13280 PF07196 Flagellin hook IN motif BRM84_13290 PF00700 Bacterial flagellin C-terminal helical region BRM84_13290 PF00669 Bacterial flagellin N-terminal helical region BRM84_13295 PF07195 Flagellar hook-associated protein 2 C-terminus BRM84_13295 PF02465 Flagellar hook-associated protein 2 N-terminus BRM84_13295 PF07196 Flagellin hook IN motif BRM84_13300 PF02561 Flagellar protein FliS BRM84_13315 PF00196 Bacterial regulatory proteins, luxR family BRM84_13315 PF00072 Response regulator receiver domain BRM84_13320 PF00309 Sigma-54 factor, Activator interacting domain (AID) BRM84_13320 PF04963 Sigma-54 factor, core binding domain BRM84_13320 PF04552 Sigma-54, DNA binding domain BRM84_13325 PF01339 CheB methylesterase BRM84_13325 PF00072 Response regulator receiver domain BRM84_13330 PF00158 Sigma-54 interaction domain BRM84_13330 PF02954 Bacterial regulatory protein, Fis family BRM84_13330 PF00072 Response regulator receiver domain BRM84_13335 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BRM84_13345 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BRM84_13345 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BRM84_13380 PF00534 Glycosyl transferases group 1 BRM84_13380 PF00535 Glycosyl transferase family 2 BRM84_13390 PF02049 Flagellar hook-basal body complex protein FliE BRM84_13395 PF01514 Secretory protein of YscJ/FliF family BRM84_13395 PF08345 Flagellar M-ring protein C-terminal BRM84_13400 PF14841 FliG middle domain BRM84_13400 PF01706 FliG C-terminal domain BRM84_13400 PF14842 FliG N-terminal domain BRM84_13410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BRM84_13410 PF18269 T3SS EscN ATPase C-terminal domain BRM84_13430 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BRM84_13430 PF02154 Flagellar motor switch protein FliM BRM84_13435 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BRM84_13440 PF04347 Flagellar biosynthesis protein, FliO BRM84_13445 PF00813 FliP family BRM84_13455 PF01313 Bacterial export proteins, family 3 BRM84_13460 PF01311 Bacterial export proteins, family 1 BRM84_13465 PF00990 Diguanylate cyclase, GGDEF domain BRM84_13465 PF13188 PAS domain BRM84_13465 PF00563 EAL domain BRM84_13465 PF03707 Bacterial signalling protein N terminal repeat BRM84_13470 PF13188 PAS domain BRM84_13470 PF03707 Bacterial signalling protein N terminal repeat BRM84_13470 PF00990 Diguanylate cyclase, GGDEF domain BRM84_13470 PF00563 EAL domain BRM84_13475 PF00563 EAL domain BRM84_13475 PF00990 Diguanylate cyclase, GGDEF domain BRM84_13475 PF03707 Bacterial signalling protein N terminal repeat BRM84_13480 PF01312 FlhB HrpN YscU SpaS Family BRM84_13485 PF00771 FHIPEP family BRM84_13490 PF00448 SRP54-type protein, GTPase domain BRM84_13495 PF10609 NUBPL iron-transfer P-loop NTPase BRM84_13500 PF04539 Sigma-70 region 3 BRM84_13500 PF04545 Sigma-70, region 4 BRM84_13500 PF04542 Sigma-70 region 2 BRM84_13505 PF00072 Response regulator receiver domain BRM84_13510 PF04344 Chemotaxis phosphatase, CheZ BRM84_13515 PF01584 CheW-like domain BRM84_13515 PF07194 P2 response regulator binding domain BRM84_13515 PF02895 Signal transducing histidine kinase, homodimeric domain BRM84_13515 PF01627 Hpt domain BRM84_13515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_13555 PF05598 Transposase domain (DUF772) BRM84_13555 PF01609 Transposase DDE domain BRM84_13595 PF00034 Cytochrome c BRM84_13650 PF00005 ABC transporter BRM84_13650 PF00664 ABC transporter transmembrane region BRM84_13655 PF00005 ABC transporter BRM84_13655 PF00664 ABC transporter transmembrane region BRM84_13680 PF01654 Cytochrome bd terminal oxidase subunit I BRM84_13710 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BRM84_13710 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BRM84_13715 PF00171 Aldehyde dehydrogenase family BRM84_13720 PF01472 PUA domain BRM84_13720 PF00696 Amino acid kinase family BRM84_13735 PF00206 Lyase BRM84_13740 PF01118 Semialdehyde dehydrogenase, NAD binding domain BRM84_13750 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase BRM84_13750 PF00696 Amino acid kinase family BRM84_13755 PF07687 Peptidase dimerisation domain BRM84_13755 PF01546 Peptidase family M20/M25/M40 BRM84_13765 PF00764 Arginosuccinate synthase BRM84_13770 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BRM84_13770 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BRM84_13780 PF09190 DALR domain BRM84_13780 PF01406 tRNA synthetases class I (C) catalytic domain BRM84_13785 PF02657 Fe-S metabolism associated domain BRM84_13800 PF01258 Prokaryotic dksA/traR C4-type zinc finger BRM84_13805 PF01809 Putative membrane protein insertion efficiency factor BRM84_13810 PF01979 Amidohydrolase family BRM84_13815 PF08460 Bacterial SH3 domain BRM84_13815 PF01551 Peptidase family M23 BRM84_13850 PF05598 Transposase domain (DUF772) BRM84_13850 PF01609 Transposase DDE domain BRM84_13865 PF01095 Pectinesterase BRM84_13880 PF00295 Glycosyl hydrolases family 28 BRM84_13890 PF13419 Haloacid dehalogenase-like hydrolase BRM84_13900 PF01979 Amidohydrolase family BRM84_13910 PF08207 Elongation factor P (EF-P) KOW-like domain BRM84_13910 PF09285 Elongation factor P, C-terminal BRM84_13910 PF01132 Elongation factor P (EF-P) OB domain BRM84_13915 PF04055 Radical SAM superfamily BRM84_13920 PF03707 Bacterial signalling protein N terminal repeat BRM84_13920 PF00990 Diguanylate cyclase, GGDEF domain BRM84_13920 PF13188 PAS domain BRM84_13920 PF00563 EAL domain BRM84_13930 PF00588 SpoU rRNA Methylase family BRM84_13935 PF00459 Inositol monophosphatase family BRM84_13940 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BRM84_13940 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BRM84_13945 PF00545 ribonuclease BRM84_13970 PF00270 DEAD/DEAH box helicase BRM84_13970 PF03880 DbpA RNA binding domain BRM84_13970 PF00271 Helicase conserved C-terminal domain BRM84_13975 PF00156 Phosphoribosyl transferase domain BRM84_13980 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BRM84_13990 PF14497 Glutathione S-transferase, C-terminal domain BRM84_13990 PF02798 Glutathione S-transferase, N-terminal domain BRM84_13995 PF00313 'Cold-shock' DNA-binding domain BRM84_14000 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BRM84_14005 PF07152 YaeQ protein BRM84_14015 PF00563 EAL domain BRM84_14015 PF00990 Diguanylate cyclase, GGDEF domain BRM84_14015 PF00072 Response regulator receiver domain BRM84_14020 PF01435 Peptidase family M48 BRM84_14025 PF00749 tRNA synthetases class I (E and Q), catalytic domain BRM84_14030 PF00106 short chain dehydrogenase BRM84_14035 PF07879 PHB/PHA accumulation regulator DNA-binding domain BRM84_14035 PF05233 PHB accumulation regulatory domain BRM84_14055 PF01119 DNA mismatch repair protein, C-terminal domain BRM84_14055 PF08676 MutL C terminal dimerisation domain BRM84_14060 PF11741 AMIN domain BRM84_14060 PF01520 N-acetylmuramoyl-L-alanine amidase BRM84_14065 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BRM84_14070 PF01256 Carbohydrate kinase BRM84_14070 PF03853 YjeF-related protein N-terminus BRM84_14075 PF08331 Domain of unknown function (DUF1730) BRM84_14085 PF02601 Exonuclease VII, large subunit BRM84_14085 PF13742 OB-fold nucleic acid binding domain BRM84_14100 PF03781 Sulfatase-modifying factor enzyme 1 BRM84_14115 PF01612 3'-5' exonuclease BRM84_14115 PF00570 HRDC domain BRM84_14120 PF04679 ATP dependent DNA ligase C terminal region BRM84_14120 PF13298 DNA polymerase Ligase (LigD) BRM84_14120 PF01068 ATP dependent DNA ligase domain BRM84_14170 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BRM84_14170 PF14850 DNA-binding domain of Proline dehydrogenase BRM84_14170 PF00171 Aldehyde dehydrogenase family BRM84_14170 PF01619 Proline dehydrogenase BRM84_14185 PF00872 Transposase, Mutator family BRM84_14230 PF04386 Stringent starvation protein B BRM84_14235 PF02798 Glutathione S-transferase, N-terminal domain BRM84_14235 PF00043 Glutathione S-transferase, C-terminal domain BRM84_14240 PF02167 Cytochrome C1 family BRM84_14245 PF00032 Cytochrome b(C-terminal)/b6/petD BRM84_14245 PF00033 Cytochrome b/b6/petB BRM84_14250 PF00355 Rieske [2Fe-2S] domain BRM84_14250 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BRM84_14260 PF01464 Transglycosylase SLT domain BRM84_14280 PF01938 TRAM domain BRM84_14280 PF04055 Radical SAM superfamily BRM84_14280 PF00919 Uncharacterized protein family UPF0004 BRM84_14285 PF02562 PhoH-like protein BRM84_14295 PF02130 Uncharacterized protein family UPF0054 BRM84_14305 PF00571 CBS domain BRM84_14305 PF03471 Transporter associated domain BRM84_14320 PF00171 Aldehyde dehydrogenase family BRM84_14330 PF00528 Binding-protein-dependent transport system inner membrane component BRM84_14335 PF00528 Binding-protein-dependent transport system inner membrane component BRM84_14340 PF00005 ABC transporter BRM84_14340 PF08402 TOBE domain BRM84_14345 PF02321 Outer membrane efflux protein BRM84_14350 PF07690 Major Facilitator Superfamily BRM84_14355 PF13533 Biotin-lipoyl like BRM84_14370 PF00120 Glutamine synthetase, catalytic domain BRM84_14380 PF00120 Glutamine synthetase, catalytic domain BRM84_14385 PF01266 FAD dependent oxidoreductase BRM84_14390 PF00990 Diguanylate cyclase, GGDEF domain BRM84_14390 PF00072 Response regulator receiver domain BRM84_14395 PF07690 Major Facilitator Superfamily BRM84_14395 PF00083 Sugar (and other) transporter BRM84_14405 PF00384 Molybdopterin oxidoreductase BRM84_14410 PF02634 FdhD/NarQ family BRM84_14415 PF07690 Major Facilitator Superfamily BRM84_14435 PF00202 Aminotransferase class-III BRM84_14440 PF00005 ABC transporter BRM84_14450 PF04286 Protein of unknown function (DUF445) BRM84_14455 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BRM84_14455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_14455 PF00512 His Kinase A (phospho-acceptor) domain BRM84_14455 PF01627 Hpt domain BRM84_14455 PF00072 Response regulator receiver domain BRM84_14455 PF00672 HAMP domain BRM84_14460 PF00072 Response regulator receiver domain BRM84_14465 PF05598 Transposase domain (DUF772) BRM84_14465 PF01609 Transposase DDE domain BRM84_14475 PF05088 Bacterial NAD-glutamate dehydrogenase BRM84_14485 PF00529 HlyD membrane-fusion protein of T1SS BRM84_14485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BRM84_14490 PF00873 AcrB/AcrD/AcrF family BRM84_14510 PF00356 Bacterial regulatory proteins, lacI family BRM84_14515 PF00391 PEP-utilising enzyme, mobile domain BRM84_14515 PF02896 PEP-utilising enzyme, TIM barrel domain BRM84_14515 PF00381 PTS HPr component phosphorylation site BRM84_14515 PF05524 PEP-utilising enzyme, N-terminal BRM84_14515 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BRM84_14520 PF00294 pfkB family carbohydrate kinase BRM84_14525 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BRM84_14540 PF01609 Transposase DDE domain BRM84_14540 PF05598 Transposase domain (DUF772) BRM84_14580 PF04717 Type VI secretion system, phage-baseplate injector BRM84_14580 PF16671 Actin cross-linking domain BRM84_14595 PF03377 TAL effector repeat BRM84_14600 PF04717 Type VI secretion system, phage-baseplate injector BRM84_14600 PF16671 Actin cross-linking domain BRM84_14660 PF01609 Transposase DDE domain BRM84_14660 PF05598 Transposase domain (DUF772) BRM84_14690 PF00593 TonB dependent receptor BRM84_14690 PF07715 TonB-dependent Receptor Plug Domain BRM84_14700 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BRM84_14700 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BRM84_14710 PF00593 TonB dependent receptor BRM84_14710 PF07715 TonB-dependent Receptor Plug Domain BRM84_14720 PF01618 MotA/TolQ/ExbB proton channel family BRM84_14725 PF13677 Membrane MotB of proton-channel complex MotA/MotB BRM84_14725 PF00691 OmpA family BRM84_14730 PF13614 AAA domain BRM84_14735 PF01584 CheW-like domain BRM84_14745 PF00072 Response regulator receiver domain BRM84_14750 PF09078 CheY binding BRM84_14750 PF02895 Signal transducing histidine kinase, homodimeric domain BRM84_14750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_14750 PF01584 CheW-like domain BRM84_14750 PF01627 Hpt domain BRM84_14770 PF02203 Tar ligand binding domain homologue BRM84_14770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BRM84_14770 PF00672 HAMP domain BRM84_14785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BRM84_14785 PF02203 Tar ligand binding domain homologue BRM84_14785 PF00672 HAMP domain BRM84_14795 PF02203 Tar ligand binding domain homologue BRM84_14795 PF00672 HAMP domain BRM84_14795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BRM84_14805 PF00672 HAMP domain BRM84_14805 PF02203 Tar ligand binding domain homologue BRM84_14805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BRM84_14810 PF02203 Tar ligand binding domain homologue BRM84_14810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BRM84_14810 PF00672 HAMP domain BRM84_14815 PF02203 Tar ligand binding domain homologue BRM84_14815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BRM84_14815 PF00672 HAMP domain BRM84_14820 PF00672 HAMP domain BRM84_14820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BRM84_14820 PF02203 Tar ligand binding domain homologue BRM84_14835 PF07238 PilZ domain BRM84_14835 PF07317 Flagellar regulator YcgR BRM84_14840 PF01584 CheW-like domain BRM84_14865 PF02203 Tar ligand binding domain homologue BRM84_14865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BRM84_14865 PF00672 HAMP domain BRM84_14870 PF03705 CheR methyltransferase, all-alpha domain BRM84_14870 PF01739 CheR methyltransferase, SAM binding domain BRM84_14875 PF03975 CheD chemotactic sensory transduction BRM84_14880 PF01339 CheB methylesterase BRM84_14880 PF00072 Response regulator receiver domain BRM84_14885 PF03707 Bacterial signalling protein N terminal repeat BRM84_14885 PF00563 EAL domain BRM84_14885 PF00990 Diguanylate cyclase, GGDEF domain BRM84_14900 PF00561 alpha/beta hydrolase fold BRM84_14905 PF11791 Aconitate B N-terminal domain BRM84_14905 PF06434 Aconitate hydratase 2 N-terminus BRM84_14905 PF00330 Aconitase family (aconitate hydratase) BRM84_14920 PF00330 Aconitase family (aconitate hydratase) BRM84_14920 PF00694 Aconitase C-terminal domain BRM84_14930 PF00501 AMP-binding enzyme BRM84_14930 PF13193 AMP-binding enzyme C-terminal domain BRM84_14935 PF00378 Enoyl-CoA hydratase/isomerase BRM84_14940 PF00512 His Kinase A (phospho-acceptor) domain BRM84_14940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_14940 PF00072 Response regulator receiver domain BRM84_14940 PF01627 Hpt domain BRM84_14950 PF00072 Response regulator receiver domain BRM84_14955 PF01336 OB-fold nucleic acid binding domain BRM84_14955 PF00152 tRNA synthetases class II (D, K and N) BRM84_14980 PF01610 Transposase BRM84_14980 PF13542 Helix-turn-helix domain of transposase family ISL3 BRM84_14980 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BRM84_15015 PF17768 RecJ OB domain BRM84_15015 PF02272 DHHA1 domain BRM84_15015 PF01368 DHH family BRM84_15025 PF01272 Transcription elongation factor, GreA/GreB, C-term BRM84_15025 PF03449 Transcription elongation factor, N-terminal BRM84_15030 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BRM84_15030 PF02142 MGS-like domain BRM84_15030 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BRM84_15040 PF00117 Glutamine amidotransferase class-I BRM84_15040 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BRM84_15045 PF01113 Dihydrodipicolinate reductase, N-terminus BRM84_15045 PF05173 Dihydrodipicolinate reductase, C-terminus BRM84_15055 PF03475 3-alpha domain BRM84_15055 PF03473 MOSC domain BRM84_15060 PF00155 Aminotransferase class I and II BRM84_15080 PF02421 Ferrous iron transport protein B BRM84_15080 PF07670 Nucleoside recognition BRM84_15080 PF07664 Ferrous iron transport protein B C terminus BRM84_15090 PF00378 Enoyl-CoA hydratase/isomerase BRM84_15100 PF00682 HMGL-like BRM84_15105 PF00106 short chain dehydrogenase BRM84_15110 PF09285 Elongation factor P, C-terminal BRM84_15110 PF01132 Elongation factor P (EF-P) OB domain BRM84_15110 PF08207 Elongation factor P (EF-P) KOW-like domain BRM84_15130 PF00083 Sugar (and other) transporter BRM84_15140 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BRM84_15140 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BRM84_15150 PF16338 Domain of unknown function (DUF4968) BRM84_15150 PF17137 Domain of unknown function (DUF5110) BRM84_15150 PF01055 Glycosyl hydrolases family 31 BRM84_15160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BRM84_15160 PF03466 LysR substrate binding domain BRM84_15165 PF01081 KDPG and KHG aldolase BRM84_15170 PF13378 Enolase C-terminal domain-like BRM84_15170 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BRM84_15175 PF08450 SMP-30/Gluconolactonase/LRE-like region BRM84_15180 PF05035 2-keto-3-deoxy-galactonokinase BRM84_15185 PF00037 4Fe-4S binding domain BRM84_15185 PF11953 Domain of unknown function (DUF3470) BRM84_15195 PF00701 Dihydrodipicolinate synthetase family BRM84_15210 PF00578 AhpC/TSA family BRM84_15215 PF13638 PIN domain BRM84_15215 PF02562 PhoH-like protein BRM84_15225 PF08543 Phosphomethylpyrimidine kinase BRM84_15255 PF03466 LysR substrate binding domain BRM84_15255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BRM84_15260 PF02678 Pirin BRM84_15260 PF17954 Quercetinase C-terminal cupin domain BRM84_15285 PF03796 DnaB-like helicase C terminal domain BRM84_15285 PF00772 DnaB-like helicase N terminal domain BRM84_15310 PF02599 Global regulator protein family BRM84_15315 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BRM84_15315 PF02272 DHHA1 domain BRM84_15315 PF01411 tRNA synthetases class II (A) BRM84_15320 PF02631 RecX family BRM84_15330 PF00154 recA bacterial DNA recombination protein BRM84_15335 PF00717 Peptidase S24-like BRM84_15335 PF01726 LexA DNA binding domain BRM84_15340 PF03109 ABC1 family BRM84_15345 PF02464 Competence-damaged protein BRM84_15350 PF01926 50S ribosome-binding GTPase BRM84_15350 PF16360 GTP-binding GTPase Middle Region BRM84_15350 PF13167 GTP-binding GTPase N-terminal BRM84_15355 PF17209 Hfq protein BRM84_15365 PF00809 Pterin binding enzyme BRM84_15370 PF01434 Peptidase family M41 BRM84_15370 PF00004 ATPase family associated with various cellular activities (AAA) BRM84_15370 PF17862 AAA+ lid domain BRM84_15370 PF06480 FtsH Extracellular BRM84_15375 PF01728 FtsJ-like methyltransferase BRM84_15380 PF01985 CRS1 / YhbY (CRM) domain BRM84_15390 PF01476 LysM domain BRM84_15390 PF01551 Peptidase family M23 BRM84_15395 PF09335 SNARE associated Golgi protein BRM84_15405 PF01975 Survival protein SurE BRM84_15410 PF01713 Smr domain BRM84_15420 PF01142 tRNA pseudouridine synthase D (TruD) BRM84_15425 PF02542 YgbB family BRM84_15435 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BRM84_15440 PF04977 Septum formation initiator BRM84_15445 PF03952 Enolase, N-terminal domain BRM84_15445 PF00113 Enolase, C-terminal TIM barrel domain BRM84_15455 PF00793 DAHP synthetase I family BRM84_15460 PF06418 CTP synthase N-terminus BRM84_15460 PF00117 Glutamine amidotransferase class-I BRM84_15470 PF00204 DNA gyrase B BRM84_15470 PF01751 Toprim domain BRM84_15470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_15470 PF00986 DNA gyrase B subunit, carboxyl terminus BRM84_15485 PF02698 DUF218 domain BRM84_15490 PF01384 Phosphate transporter family BRM84_15505 PF00571 CBS domain BRM84_15505 PF01595 Cyclin M transmembrane N-terminal domain BRM84_15505 PF03471 Transporter associated domain BRM84_15520 PF00296 Luciferase-like monooxygenase BRM84_15540 PF07690 Major Facilitator Superfamily BRM84_15550 PF00664 ABC transporter transmembrane region BRM84_15550 PF00005 ABC transporter BRM84_15555 PF00005 ABC transporter BRM84_15575 PF00534 Glycosyl transferases group 1 BRM84_15575 PF13579 Glycosyl transferase 4-like domain BRM84_15595 PF08241 Methyltransferase domain BRM84_15610 PF00535 Glycosyl transferase family 2 BRM84_15615 PF01943 Polysaccharide biosynthesis protein BRM84_15620 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BRM84_15640 PF05523 WxcM-like, C-terminal BRM84_15655 PF00034 Cytochrome c BRM84_15665 PF08281 Sigma-70, region 4 BRM84_15665 PF04542 Sigma-70 region 2 BRM84_15675 PF00082 Subtilase family BRM84_15680 PF01578 Cytochrome C assembly protein BRM84_15685 PF04995 Heme exporter protein D (CcmD) BRM84_15690 PF03100 CcmE BRM84_15695 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BRM84_15695 PF01578 Cytochrome C assembly protein BRM84_15700 PF08534 Redoxin BRM84_15705 PF03918 Cytochrome C biogenesis protein BRM84_15715 PF03377 TAL effector repeat BRM84_15735 PF03377 TAL effector repeat BRM84_15755 PF03377 TAL effector repeat BRM84_15775 PF00873 AcrB/AcrD/AcrF family BRM84_15780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BRM84_15780 PF00529 HlyD membrane-fusion protein of T1SS BRM84_15830 PF00486 Transcriptional regulatory protein, C terminal BRM84_15830 PF00072 Response regulator receiver domain BRM84_15835 PF03150 Di-haem cytochrome c peroxidase BRM84_15835 PF00034 Cytochrome c BRM84_15840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_15840 PF00512 His Kinase A (phospho-acceptor) domain BRM84_15845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BRM84_15845 PF03466 LysR substrate binding domain BRM84_15865 PF00069 Protein kinase domain BRM84_15905 PF04717 Type VI secretion system, phage-baseplate injector BRM84_15905 PF16671 Actin cross-linking domain BRM84_15930 PF17871 AAA lid domain BRM84_15930 PF10431 C-terminal, D2-small domain, of ClpB protein BRM84_15930 PF07724 AAA domain (Cdc48 subfamily) BRM84_15930 PF00004 ATPase family associated with various cellular activities (AAA) BRM84_15955 PF05638 Type VI secretion system effector, Hcp BRM84_15985 PF05598 Transposase domain (DUF772) BRM84_15985 PF01609 Transposase DDE domain BRM84_16005 PF01609 Transposase DDE domain BRM84_16005 PF05598 Transposase domain (DUF772) BRM84_16050 PF01106 NifU-like domain BRM84_16055 PF01329 Pterin 4 alpha carbinolamine dehydratase BRM84_16065 PF02535 ZIP Zinc transporter BRM84_16070 PF02535 ZIP Zinc transporter BRM84_16075 PF11737 Protein of unknown function (DUF3300) BRM84_16080 PF01479 S4 domain BRM84_16080 PF00849 RNA pseudouridylate synthase BRM84_16085 PF10150 Ribonuclease E/G family BRM84_16085 PF00575 S1 RNA binding domain BRM84_16085 PF12111 Polyribonucleotide phosphorylase C terminal BRM84_16100 PF00072 Response regulator receiver domain BRM84_16100 PF00196 Bacterial regulatory proteins, luxR family BRM84_16110 PF01609 Transposase DDE domain BRM84_16110 PF05598 Transposase domain (DUF772) BRM84_16120 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BRM84_16130 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BRM84_16130 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BRM84_16130 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BRM84_16140 PF01648 4'-phosphopantetheinyl transferase superfamily BRM84_16140 PF17837 4'-phosphopantetheinyl transferase N-terminal domain BRM84_16170 PF05598 Transposase domain (DUF772) BRM84_16170 PF01609 Transposase DDE domain BRM84_16175 PF01609 Transposase DDE domain BRM84_16175 PF05598 Transposase domain (DUF772) BRM84_16205 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BRM84_16205 PF14824 Sirohaem biosynthesis protein central BRM84_16205 PF10414 Sirohaem synthase dimerisation region BRM84_16230 PF12804 MobA-like NTP transferase domain BRM84_16235 PF00994 Probable molybdopterin binding domain BRM84_16235 PF03454 MoeA C-terminal region (domain IV) BRM84_16235 PF03453 MoeA N-terminal region (domain I and II) BRM84_16320 PF04616 Glycosyl hydrolases family 43 BRM84_16325 PF07532 Bacterial Ig-like domain (group 4) BRM84_16330 PF00593 TonB dependent receptor BRM84_16330 PF07715 TonB-dependent Receptor Plug Domain BRM84_16340 PF09286 Pro-kumamolisin, activation domain BRM84_16340 PF00082 Subtilase family BRM84_16380 PF13520 Amino acid permease BRM84_16395 PF01321 Creatinase/Prolidase N-terminal domain BRM84_16395 PF00557 Metallopeptidase family M24 BRM84_16400 PF00171 Aldehyde dehydrogenase family BRM84_16405 PF00701 Dihydrodipicolinate synthetase family BRM84_16410 PF07992 Pyridine nucleotide-disulphide oxidoreductase BRM84_16410 PF04324 BFD-like [2Fe-2S] binding domain BRM84_16420 PF01266 FAD dependent oxidoreductase BRM84_16425 PF05544 Proline racemase BRM84_16435 PF02881 SRP54-type protein, helical bundle domain BRM84_16435 PF00448 SRP54-type protein, GTPase domain BRM84_16450 PF00633 Helix-hairpin-helix motif BRM84_16450 PF14815 NUDIX domain BRM84_16450 PF00730 HhH-GPD superfamily base excision DNA repair protein BRM84_16455 PF04362 Bacterial Fe(2+) trafficking BRM84_16460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_16460 PF00072 Response regulator receiver domain BRM84_16460 PF13426 PAS domain BRM84_16550 PF08212 Lipocalin-like domain BRM84_16580 PF03808 Glycosyl transferase WecB/TagA/CpsF family BRM84_16595 PF14667 Polysaccharide biosynthesis C-terminal domain BRM84_16605 PF00534 Glycosyl transferases group 1 BRM84_16605 PF13439 Glycosyltransferase Family 4 BRM84_16625 PF02397 Bacterial sugar transferase BRM84_16645 PF13411 MerR HTH family regulatory protein BRM84_16650 PF00216 Bacterial DNA-binding protein BRM84_16655 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BRM84_16655 PF01588 Putative tRNA binding domain BRM84_16655 PF03484 tRNA synthetase B5 domain BRM84_16655 PF03483 B3/4 domain BRM84_16655 PF03147 Ferredoxin-fold anticodon binding domain BRM84_16660 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BRM84_16660 PF01409 tRNA synthetases class II core domain (F) BRM84_16665 PF00453 Ribosomal protein L20 BRM84_16670 PF01632 Ribosomal protein L35 BRM84_16675 PF05198 Translation initiation factor IF-3, N-terminal domain BRM84_16675 PF00707 Translation initiation factor IF-3, C-terminal domain BRM84_16680 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BRM84_16680 PF03129 Anticodon binding domain BRM84_16680 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BRM84_16680 PF02824 TGS domain BRM84_16705 PF00271 Helicase conserved C-terminal domain BRM84_16705 PF04851 Type III restriction enzyme, res subunit BRM84_16705 PF17757 UvrB interaction domain BRM84_16705 PF02151 UvrB/uvrC motif BRM84_16705 PF12344 Ultra-violet resistance protein B BRM84_16710 PF07963 Prokaryotic N-terminal methylation motif BRM84_16710 PF00114 Pilin (bacterial filament) BRM84_16720 PF07963 Prokaryotic N-terminal methylation motif BRM84_16720 PF00114 Pilin (bacterial filament) BRM84_16725 PF05567 Neisseria PilC beta-propeller domain BRM84_16745 PF12019 Type II transport protein GspH BRM84_16745 PF07963 Prokaryotic N-terminal methylation motif BRM84_16750 PF03641 Possible lysine decarboxylase BRM84_16750 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases BRM84_16750 PF11892 Domain of unknown function (DUF3412) BRM84_16755 PF00593 TonB dependent receptor BRM84_16765 PF01914 MarC family integral membrane protein BRM84_16775 PF00462 Glutaredoxin BRM84_16780 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BRM84_16780 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BRM84_16785 PF02222 ATP-grasp domain BRM84_16785 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BRM84_16790 PF00731 AIR carboxylase BRM84_16800 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BRM84_16800 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BRM84_16810 PF00575 S1 RNA binding domain BRM84_16810 PF03725 3' exoribonuclease family, domain 2 BRM84_16810 PF00013 KH domain BRM84_16810 PF01138 3' exoribonuclease family, domain 1 BRM84_16810 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BRM84_16815 PF00312 Ribosomal protein S15 BRM84_16820 PF16198 tRNA pseudouridylate synthase B C-terminal domain BRM84_16820 PF09157 Pseudouridine synthase II TruB, C-terminal BRM84_16820 PF01509 TruB family pseudouridylate synthase (N terminal domain) BRM84_16825 PF02033 Ribosome-binding factor A BRM84_16830 PF04760 Translation initiation factor IF-2, N-terminal region BRM84_16830 PF08364 Bacterial translation initiation factor IF-2 associated region BRM84_16830 PF11987 Translation-initiation factor 2 BRM84_16830 PF00009 Elongation factor Tu GTP binding domain BRM84_16835 PF08529 NusA N-terminal domain BRM84_16835 PF00575 S1 RNA binding domain BRM84_16835 PF13184 NusA-like KH domain BRM84_16840 PF02576 RimP N-terminal domain BRM84_16840 PF17384 RimP C-terminal SH3 domain BRM84_16850 PF00361 Proton-conducting membrane transporter BRM84_16855 PF00361 Proton-conducting membrane transporter BRM84_16855 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus BRM84_16860 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BRM84_16860 PF00361 Proton-conducting membrane transporter BRM84_16865 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BRM84_16870 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BRM84_16875 PF12838 4Fe-4S dicluster domain BRM84_16880 PF00146 NADH dehydrogenase BRM84_16885 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal BRM84_16885 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BRM84_16885 PF00384 Molybdopterin oxidoreductase BRM84_16890 PF10531 SLBB domain BRM84_16890 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BRM84_16890 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BRM84_16900 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BRM84_16905 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BRM84_16910 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BRM84_16915 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BRM84_16930 PF00121 Triosephosphate isomerase BRM84_16965 PF00990 Diguanylate cyclase, GGDEF domain BRM84_16965 PF00563 EAL domain BRM84_16965 PF03707 Bacterial signalling protein N terminal repeat BRM84_16980 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BRM84_16980 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BRM84_16980 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BRM84_16980 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BRM84_16985 PF17848 Acetyl-coA carboxylase zinc finger domain BRM84_16985 PF01039 Carboxyl transferase domain BRM84_16990 PF00290 Tryptophan synthase alpha chain BRM84_17000 PF00291 Pyridoxal-phosphate dependent enzyme BRM84_17005 PF03466 LysR substrate binding domain BRM84_17005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BRM84_17010 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BRM84_17015 PF01416 tRNA pseudouridine synthase BRM84_17035 PF02774 Semialdehyde dehydrogenase, dimerisation domain BRM84_17035 PF01118 Semialdehyde dehydrogenase, NAD binding domain BRM84_17040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BRM84_17040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BRM84_17045 PF01264 Chorismate synthase BRM84_17050 PF05175 Methyltransferase small domain BRM84_17055 PF02630 SCO1/SenC BRM84_17060 PF02666 Phosphatidylserine decarboxylase BRM84_17105 PF01272 Transcription elongation factor, GreA/GreB, C-term BRM84_17105 PF03449 Transcription elongation factor, N-terminal BRM84_17110 PF00919 Uncharacterized protein family UPF0004 BRM84_17110 PF18693 TRAM domain BRM84_17110 PF04055 Radical SAM superfamily BRM84_17115 PF01738 Dienelactone hydrolase family BRM84_17135 PF00692 dUTPase BRM84_17140 PF10609 NUBPL iron-transfer P-loop NTPase BRM84_17185 PF01266 FAD dependent oxidoreductase BRM84_17190 PF04235 Protein of unknown function (DUF418) BRM84_17195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BRM84_17200 PF00877 NlpC/P60 family BRM84_17205 PF00877 NlpC/P60 family BRM84_17220 PF00375 Sodium:dicarboxylate symporter family BRM84_17225 PF00245 Alkaline phosphatase BRM84_17230 PF09179 TilS substrate binding domain BRM84_17230 PF11734 TilS substrate C-terminal domain BRM84_17230 PF01171 PP-loop family BRM84_17235 PF02609 Exonuclease VII small subunit BRM84_17240 PF00348 Polyprenyl synthetase BRM84_17265 PF01523 Putative modulator of DNA gyrase BRM84_17270 PF04751 Protein of unknown function (DUF615) BRM84_17275 PF01523 Putative modulator of DNA gyrase BRM84_17285 PF13502 AsmA-like C-terminal region BRM84_17285 PF13116 Protein of unknown function BRM84_17290 PF00575 S1 RNA binding domain BRM84_17290 PF10150 Ribonuclease E/G family BRM84_17295 PF02545 Maf-like protein BRM84_17300 PF04402 Protein of unknown function (DUF541) BRM84_17325 PF02590 Predicted SPOUT methyltransferase BRM84_17350 PF01467 Cytidylyltransferase-like BRM84_17370 PF00133 tRNA synthetases class I (I, L, M and V) BRM84_17370 PF13603 Leucyl-tRNA synthetase, Domain 2 BRM84_17370 PF08264 Anticodon-binding domain of tRNA BRM84_17380 PF00085 Thioredoxin BRM84_17455 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BRM84_17455 PF00128 Alpha amylase, catalytic domain BRM84_17460 PF01609 Transposase DDE domain BRM84_17460 PF05598 Transposase domain (DUF772) BRM84_17465 PF01609 Transposase DDE domain BRM84_17465 PF05598 Transposase domain (DUF772) BRM84_17545 PF00657 GDSL-like Lipase/Acylhydrolase BRM84_17545 PF03797 Autotransporter beta-domain BRM84_17560 PF05690 Thiazole biosynthesis protein ThiG BRM84_17570 PF02390 Putative methyltransferase BRM84_17575 PF03600 Citrate transporter BRM84_17575 PF02080 TrkA-C domain BRM84_17600 PF01557 Fumarylacetoacetate (FAA) hydrolase family BRM84_17605 PF01741 Large-conductance mechanosensitive channel, MscL BRM84_17630 PF08032 RNA 2'-O ribose methyltransferase substrate binding BRM84_17630 PF00588 SpoU rRNA Methylase family BRM84_17660 PF01433 Peptidase family M1 domain BRM84_17660 PF11838 ERAP1-like C-terminal domain BRM84_17665 PF00873 AcrB/AcrD/AcrF family BRM84_17670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BRM84_17670 PF00529 HlyD membrane-fusion protein of T1SS BRM84_17680 PF00009 Elongation factor Tu GTP binding domain BRM84_17685 PF01507 Phosphoadenosine phosphosulfate reductase family BRM84_17690 PF00175 Oxidoreductase NAD-binding domain BRM84_17690 PF00258 Flavodoxin BRM84_17690 PF00667 FAD binding domain BRM84_17695 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BRM84_17695 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BRM84_17700 PF01507 Phosphoadenosine phosphosulfate reductase family BRM84_17720 PF00072 Response regulator receiver domain BRM84_17720 PF01627 Hpt domain BRM84_17720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_17720 PF00672 HAMP domain BRM84_17720 PF00512 His Kinase A (phospho-acceptor) domain BRM84_17745 PF03466 LysR substrate binding domain BRM84_17745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BRM84_17750 PF10414 Sirohaem synthase dimerisation region BRM84_17750 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BRM84_17750 PF14824 Sirohaem biosynthesis protein central BRM84_17755 PF00291 Pyridoxal-phosphate dependent enzyme BRM84_17765 PF01661 Macro domain BRM84_17770 PF00274 Fructose-bisphosphate aldolase class-I BRM84_17775 PF00224 Pyruvate kinase, barrel domain BRM84_17775 PF02887 Pyruvate kinase, alpha/beta domain BRM84_17785 PF00162 Phosphoglycerate kinase BRM84_17820 PF00199 Catalase BRM84_17820 PF06628 Catalase-related immune-responsive BRM84_17820 PF18011 C-terminal domain found in long catalases BRM84_17845 PF01609 Transposase DDE domain BRM84_17845 PF05598 Transposase domain (DUF772) BRM84_17865 PF02311 AraC-like ligand binding domain BRM84_17865 PF12833 Helix-turn-helix domain BRM84_17895 PF07676 WD40-like Beta Propeller Repeat BRM84_17895 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BRM84_17895 PF00326 Prolyl oligopeptidase family BRM84_17920 PF05598 Transposase domain (DUF772) BRM84_17920 PF01609 Transposase DDE domain BRM84_17925 PF03169 OPT oligopeptide transporter protein BRM84_17945 PF02811 PHP domain BRM84_17945 PF14579 Helix-hairpin-helix motif BRM84_17945 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BRM84_17945 PF07733 Bacterial DNA polymerase III alpha NTPase domain BRM84_17965 PF01726 LexA DNA binding domain BRM84_17965 PF00717 Peptidase S24-like BRM84_17995 PF00300 Histidine phosphatase superfamily (branch 1) BRM84_17995 PF13456 Reverse transcriptase-like BRM84_18030 PF11867 Domain of unknown function (DUF3387) BRM84_18030 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BRM84_18030 PF18766 SWI2/SNF2 ATPase BRM84_18035 PF05598 Transposase domain (DUF772) BRM84_18035 PF01609 Transposase DDE domain BRM84_18060 PF05598 Transposase domain (DUF772) BRM84_18060 PF01609 Transposase DDE domain BRM84_18065 PF01420 Type I restriction modification DNA specificity domain BRM84_18070 PF05598 Transposase domain (DUF772) BRM84_18070 PF01609 Transposase DDE domain BRM84_18080 PF08780 Nucleotidyltransferase substrate binding protein like BRM84_18085 PF02384 N-6 DNA Methylase BRM84_18105 PF04851 Type III restriction enzyme, res subunit BRM84_18105 PF08463 EcoEI R protein C-terminal BRM84_18105 PF00271 Helicase conserved C-terminal domain BRM84_18105 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BRM84_18115 PF02384 N-6 DNA Methylase BRM84_18125 PF01420 Type I restriction modification DNA specificity domain BRM84_18225 PF04717 Type VI secretion system, phage-baseplate injector BRM84_18225 PF16671 Actin cross-linking domain BRM84_18235 PF00004 ATPase family associated with various cellular activities (AAA) BRM84_18235 PF17871 AAA lid domain BRM84_18235 PF10431 C-terminal, D2-small domain, of ClpB protein BRM84_18235 PF07724 AAA domain (Cdc48 subfamily) BRM84_18290 PF16671 Actin cross-linking domain BRM84_18290 PF04717 Type VI secretion system, phage-baseplate injector BRM84_18300 PF16671 Actin cross-linking domain BRM84_18300 PF04717 Type VI secretion system, phage-baseplate injector BRM84_18305 PF00182 Chitinase class I BRM84_18315 PF04717 Type VI secretion system, phage-baseplate injector BRM84_18315 PF16671 Actin cross-linking domain BRM84_18360 PF01609 Transposase DDE domain BRM84_18360 PF05598 Transposase domain (DUF772) BRM84_18415 PF04717 Type VI secretion system, phage-baseplate injector BRM84_18430 PF00691 OmpA family BRM84_18430 PF04972 BON domain BRM84_18470 PF02222 ATP-grasp domain BRM84_18495 PF00730 HhH-GPD superfamily base excision DNA repair protein BRM84_18510 PF00196 Bacterial regulatory proteins, luxR family BRM84_18510 PF00072 Response regulator receiver domain BRM84_18515 PF07730 Histidine kinase BRM84_18530 PF03775 Septum formation inhibitor MinC, C-terminal domain BRM84_18530 PF05209 Septum formation inhibitor MinC, N-terminal domain BRM84_18535 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BRM84_18540 PF03776 Septum formation topological specificity factor MinE BRM84_18550 PF00512 His Kinase A (phospho-acceptor) domain BRM84_18550 PF08521 Two-component sensor kinase N-terminal BRM84_18550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_18555 PF00486 Transcriptional regulatory protein, C terminal BRM84_18555 PF00072 Response regulator receiver domain BRM84_18560 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase BRM84_18570 PF00884 Sulfatase BRM84_18570 PF08019 Phosphoethanolamine transferase EptA/EptB BRM84_18590 PF00005 ABC transporter BRM84_18590 PF00664 ABC transporter transmembrane region BRM84_18590 PF03412 Peptidase C39 family BRM84_18610 PF02347 Glycine cleavage system P-protein BRM84_18665 PF01196 Ribosomal protein L17 BRM84_18670 PF01000 RNA polymerase Rpb3/RpoA insert domain BRM84_18670 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BRM84_18670 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BRM84_18675 PF00163 Ribosomal protein S4/S9 N-terminal domain BRM84_18675 PF01479 S4 domain BRM84_18680 PF00411 Ribosomal protein S11 BRM84_18685 PF00416 Ribosomal protein S13/S18 BRM84_18690 PF00344 SecY translocase BRM84_18695 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BRM84_18700 PF00327 Ribosomal protein L30p/L7e BRM84_18705 PF00333 Ribosomal protein S5, N-terminal domain BRM84_18705 PF03719 Ribosomal protein S5, C-terminal domain BRM84_18710 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BRM84_18715 PF00347 Ribosomal protein L6 BRM84_18720 PF00410 Ribosomal protein S8 BRM84_18725 PF00253 Ribosomal protein S14p/S29e BRM84_18730 PF00281 Ribosomal protein L5 BRM84_18730 PF00673 ribosomal L5P family C-terminus BRM84_18735 PF00467 KOW motif BRM84_18735 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BRM84_18740 PF00238 Ribosomal protein L14p/L23e BRM84_18745 PF00366 Ribosomal protein S17 BRM84_18750 PF00831 Ribosomal L29 protein BRM84_18755 PF00252 Ribosomal protein L16p/L10e BRM84_18760 PF07650 KH domain BRM84_18760 PF00189 Ribosomal protein S3, C-terminal domain BRM84_18765 PF00237 Ribosomal protein L22p/L17e BRM84_18770 PF00203 Ribosomal protein S19 BRM84_18775 PF00181 Ribosomal Proteins L2, RNA binding domain BRM84_18775 PF03947 Ribosomal Proteins L2, C-terminal domain BRM84_18780 PF00276 Ribosomal protein L23 BRM84_18785 PF00573 Ribosomal protein L4/L1 family BRM84_18790 PF00297 Ribosomal protein L3 BRM84_18795 PF00338 Ribosomal protein S10p/S20e BRM84_18810 PF03143 Elongation factor Tu C-terminal domain BRM84_18810 PF03144 Elongation factor Tu domain 2 BRM84_18810 PF00009 Elongation factor Tu GTP binding domain BRM84_18815 PF00009 Elongation factor Tu GTP binding domain BRM84_18815 PF00679 Elongation factor G C-terminus BRM84_18815 PF03144 Elongation factor Tu domain 2 BRM84_18815 PF03764 Elongation factor G, domain IV BRM84_18815 PF14492 Elongation Factor G, domain II BRM84_18820 PF00177 Ribosomal protein S7p/S5e BRM84_18825 PF00164 Ribosomal protein S12/S23 BRM84_18830 PF04998 RNA polymerase Rpb1, domain 5 BRM84_18830 PF05000 RNA polymerase Rpb1, domain 4 BRM84_18830 PF04983 RNA polymerase Rpb1, domain 3 BRM84_18830 PF00623 RNA polymerase Rpb1, domain 2 BRM84_18830 PF04997 RNA polymerase Rpb1, domain 1 BRM84_18835 PF04563 RNA polymerase beta subunit BRM84_18835 PF04560 RNA polymerase Rpb2, domain 7 BRM84_18835 PF04565 RNA polymerase Rpb2, domain 3 BRM84_18835 PF04561 RNA polymerase Rpb2, domain 2 BRM84_18835 PF10385 RNA polymerase beta subunit external 1 domain BRM84_18835 PF00562 RNA polymerase Rpb2, domain 6 BRM84_18840 PF16320 Ribosomal protein L7/L12 dimerisation domain BRM84_18840 PF00542 Ribosomal protein L7/L12 C-terminal domain BRM84_18845 PF00466 Ribosomal protein L10 BRM84_18850 PF00687 Ribosomal protein L1p/L10e family BRM84_18855 PF00298 Ribosomal protein L11, RNA binding domain BRM84_18855 PF03946 Ribosomal protein L11, N-terminal domain BRM84_18865 PF02357 Transcription termination factor nusG BRM84_18865 PF00467 KOW motif BRM84_18870 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BRM84_18880 PF03143 Elongation factor Tu C-terminal domain BRM84_18880 PF03144 Elongation factor Tu domain 2 BRM84_18880 PF00009 Elongation factor Tu GTP binding domain BRM84_18900 PF01926 50S ribosome-binding GTPase BRM84_18900 PF06071 Protein of unknown function (DUF933) BRM84_18905 PF01195 Peptidyl-tRNA hydrolase BRM84_18910 PF01386 Ribosomal L25p family BRM84_18910 PF14693 Ribosomal protein TL5, C-terminal domain BRM84_18915 PF14572 Phosphoribosyl synthetase-associated domain BRM84_18915 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BRM84_18925 PF08544 GHMP kinases C terminal BRM84_18925 PF00288 GHMP kinases N terminal domain BRM84_18930 PF03550 Outer membrane lipoprotein LolB BRM84_18940 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BRM84_18940 PF01488 Shikimate / quinate 5-dehydrogenase BRM84_18940 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BRM84_18945 PF00472 RF-1 domain BRM84_18945 PF03462 PCRF domain BRM84_18955 PF00994 Probable molybdopterin binding domain BRM84_18960 PF03976 Polyphosphate kinase 2 (PPK2) BRM84_18970 PF00708 Acylphosphatase BRM84_18975 PF08534 Redoxin BRM84_18980 PF03631 Virulence factor BrkB BRM84_18985 PF03358 NADPH-dependent FMN reductase BRM84_19000 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain BRM84_19000 PF17189 Glycosyl hydrolase family 30 beta sandwich domain BRM84_19010 PF04073 Aminoacyl-tRNA editing domain BRM84_19020 PF01063 Amino-transferase class IV BRM84_19050 PF02233 NAD(P) transhydrogenase beta subunit BRM84_19055 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BRM84_19075 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BRM84_19075 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BRM84_19075 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BRM84_19090 PF01612 3'-5' exonuclease BRM84_19090 PF00476 DNA polymerase family A BRM84_19090 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BRM84_19090 PF01367 5'-3' exonuclease, C-terminal SAM fold BRM84_19095 PF00293 NUDIX domain BRM84_19105 PF00561 alpha/beta hydrolase fold BRM84_19140 PF05175 Methyltransferase small domain BRM84_19140 PF17827 PrmC N-terminal domain BRM84_19145 PF00578 AhpC/TSA family BRM84_19145 PF10417 C-terminal domain of 1-Cys peroxiredoxin BRM84_19150 PF07992 Pyridine nucleotide-disulphide oxidoreductase BRM84_19150 PF13192 Thioredoxin domain BRM84_19155 PF03466 LysR substrate binding domain BRM84_19155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BRM84_19165 PF01272 Transcription elongation factor, GreA/GreB, C-term BRM84_19165 PF03449 Transcription elongation factor, N-terminal BRM84_19170 PF00923 Transaldolase/Fructose-6-phosphate aldolase BRM84_19205 PF01625 Peptide methionine sulfoxide reductase BRM84_19240 PF00462 Glutaredoxin BRM84_19245 PF13181 Tetratricopeptide repeat BRM84_19245 PF01435 Peptidase family M48 BRM84_19250 PF00072 Response regulator receiver domain BRM84_19250 PF00486 Transcriptional regulatory protein, C terminal BRM84_19255 PF11808 Phosphate regulon sensor protein PhoR BRM84_19255 PF00989 PAS fold BRM84_19255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_19255 PF00512 His Kinase A (phospho-acceptor) domain BRM84_19260 PF13089 Polyphosphate kinase N-terminal domain BRM84_19260 PF13090 Polyphosphate kinase C-terminal domain 2 BRM84_19260 PF17941 Polyphosphate kinase C-terminal domain 1 BRM84_19260 PF02503 Polyphosphate kinase middle domain BRM84_19265 PF02541 Ppx/GppA phosphatase family BRM84_19270 PF13439 Glycosyltransferase Family 4 BRM84_19270 PF00534 Glycosyl transferases group 1 BRM84_19275 PF01569 PAP2 superfamily BRM84_19280 PF00149 Calcineurin-like phosphoesterase BRM84_19300 PF04305 Protein of unknown function (DUF455) BRM84_19305 PF00156 Phosphoribosyl transferase domain BRM84_19320 PF02875 Mur ligase family, glutamate ligase domain BRM84_19320 PF08245 Mur ligase middle domain BRM84_19330 PF00300 Histidine phosphatase superfamily (branch 1) BRM84_19335 PF10459 Peptidase S46 BRM84_19355 PF00107 Zinc-binding dehydrogenase BRM84_19355 PF08240 Alcohol dehydrogenase GroES-like domain BRM84_19365 PF12857 TOBE-like domain BRM84_19365 PF17850 CysA C-terminal regulatory domain BRM84_19365 PF00005 ABC transporter BRM84_19370 PF00528 Binding-protein-dependent transport system inner membrane component BRM84_19375 PF00528 Binding-protein-dependent transport system inner membrane component BRM84_19385 PF00155 Aminotransferase class I and II BRM84_19395 PF00849 RNA pseudouridylate synthase BRM84_19405 PF05736 OprF membrane domain BRM84_19405 PF00691 OmpA family BRM84_19415 PF00107 Zinc-binding dehydrogenase BRM84_19415 PF08240 Alcohol dehydrogenase GroES-like domain BRM84_19420 PF07992 Pyridine nucleotide-disulphide oxidoreductase BRM84_19420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BRM84_19465 PF00072 Response regulator receiver domain BRM84_19465 PF01627 Hpt domain BRM84_19465 PF00512 His Kinase A (phospho-acceptor) domain BRM84_19465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_19465 PF00672 HAMP domain BRM84_19465 PF17149 Periplasmic sensor domain found in signal transduction proteins BRM84_19470 PF00990 Diguanylate cyclase, GGDEF domain BRM84_19470 PF00072 Response regulator receiver domain BRM84_19490 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BRM84_19490 PF00749 tRNA synthetases class I (E and Q), catalytic domain BRM84_19550 PF01728 FtsJ-like methyltransferase BRM84_19550 PF18125 RlmM ferredoxin-like domain BRM84_19555 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BRM84_19555 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BRM84_19560 PF08450 SMP-30/Gluconolactonase/LRE-like region BRM84_19580 PF00378 Enoyl-CoA hydratase/isomerase BRM84_19585 PF00171 Aldehyde dehydrogenase family BRM84_19590 PF00501 AMP-binding enzyme BRM84_19590 PF13193 AMP-binding enzyme C-terminal domain BRM84_19595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BRM84_19595 PF03466 LysR substrate binding domain BRM84_19605 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BRM84_19635 PF01494 FAD binding domain BRM84_19640 PF01494 FAD binding domain BRM84_19650 PF01923 Cobalamin adenosyltransferase BRM84_19655 PF00850 Histone deacetylase domain BRM84_19660 PF04453 LPS transport system D BRM84_19660 PF03968 OstA-like protein BRM84_19665 PF00639 PPIC-type PPIASE domain BRM84_19665 PF09312 SurA N-terminal domain BRM84_19670 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BRM84_19680 PF00398 Ribosomal RNA adenine dimethylase BRM84_19685 PF04379 ApaG domain BRM84_19690 PF00149 Calcineurin-like phosphoesterase BRM84_19695 PF00186 Dihydrofolate reductase BRM84_19705 PF00303 Thymidylate synthase BRM84_19710 PF01790 Prolipoprotein diacylglyceryl transferase BRM84_19730 PF01219 Prokaryotic diacylglycerol kinase BRM84_19755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_19755 PF08521 Two-component sensor kinase N-terminal BRM84_19755 PF00512 His Kinase A (phospho-acceptor) domain BRM84_19760 PF00486 Transcriptional regulatory protein, C terminal BRM84_19760 PF00072 Response regulator receiver domain BRM84_19765 PF13472 GDSL-like Lipase/Acylhydrolase family BRM84_19770 PF00005 ABC transporter BRM84_19780 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BRM84_19830 PF00248 Aldo/keto reductase family BRM84_19840 PF01773 Na+ dependent nucleoside transporter N-terminus BRM84_19840 PF07662 Na+ dependent nucleoside transporter C-terminus BRM84_19840 PF07670 Nucleoside recognition BRM84_19845 PF00294 pfkB family carbohydrate kinase BRM84_19865 PF01207 Dihydrouridine synthase (Dus) BRM84_19880 PF02773 S-adenosylmethionine synthetase, C-terminal domain BRM84_19880 PF02772 S-adenosylmethionine synthetase, central domain BRM84_19880 PF00438 S-adenosylmethionine synthetase, N-terminal domain BRM84_19890 PF00328 Histidine phosphatase superfamily (branch 2) BRM84_19925 PF00311 Phosphoenolpyruvate carboxylase BRM84_19935 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BRM84_19935 PF05221 S-adenosyl-L-homocysteine hydrolase BRM84_19940 PF13649 Methyltransferase domain BRM84_19975 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BRM84_19990 PF00082 Subtilase family BRM84_19990 PF09286 Pro-kumamolisin, activation domain BRM84_19995 PF08240 Alcohol dehydrogenase GroES-like domain BRM84_19995 PF14765 Polyketide synthase dehydratase BRM84_19995 PF00550 Phosphopantetheine attachment site BRM84_19995 PF08659 KR domain BRM84_19995 PF02801 Beta-ketoacyl synthase, C-terminal domain BRM84_19995 PF00109 Beta-ketoacyl synthase, N-terminal domain BRM84_19995 PF16197 Ketoacyl-synthetase C-terminal extension BRM84_19995 PF00107 Zinc-binding dehydrogenase BRM84_19995 PF00698 Acyl transferase domain BRM84_20010 PF02219 Methylenetetrahydrofolate reductase BRM84_20025 PF00293 NUDIX domain BRM84_20035 PF07516 SecA Wing and Scaffold domain BRM84_20035 PF02810 SEC-C motif BRM84_20035 PF01043 SecA preprotein cross-linking domain BRM84_20035 PF07517 SecA DEAD-like domain BRM84_20040 PF01551 Peptidase family M23 BRM84_20040 PF01476 LysM domain BRM84_20050 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BRM84_20055 PF12327 FtsZ family, C-terminal domain BRM84_20055 PF00091 Tubulin/FtsZ family, GTPase domain BRM84_20060 PF02491 SHS2 domain inserted in FTSA BRM84_20065 PF03799 Cell division protein FtsQ BRM84_20065 PF08478 POTRA domain, FtsQ-type BRM84_20070 PF01820 D-ala D-ala ligase N-terminus BRM84_20070 PF07478 D-ala D-ala ligase C-terminus BRM84_20075 PF01225 Mur ligase family, catalytic domain BRM84_20075 PF02875 Mur ligase family, glutamate ligase domain BRM84_20075 PF08245 Mur ligase middle domain BRM84_20080 PF03033 Glycosyltransferase family 28 N-terminal domain BRM84_20080 PF04101 Glycosyltransferase family 28 C-terminal domain BRM84_20085 PF01098 Cell cycle protein BRM84_20090 PF00953 Glycosyl transferase family 4 BRM84_20095 PF02875 Mur ligase family, glutamate ligase domain BRM84_20095 PF01225 Mur ligase family, catalytic domain BRM84_20095 PF08245 Mur ligase middle domain BRM84_20100 PF08245 Mur ligase middle domain BRM84_20100 PF01225 Mur ligase family, catalytic domain BRM84_20100 PF02875 Mur ligase family, glutamate ligase domain BRM84_20105 PF03717 Penicillin-binding Protein dimerisation domain BRM84_20105 PF00905 Penicillin binding protein transpeptidase domain BRM84_20110 PF04999 Cell division protein FtsL BRM84_20115 PF01795 MraW methylase family BRM84_20120 PF02381 MraZ protein, putative antitoxin-like BRM84_20140 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BRM84_20150 PF02021 Uncharacterised protein family UPF0102 BRM84_20155 PF04307 LexA-binding, inner membrane-associated putative hydrolase BRM84_20160 PF02913 FAD linked oxidases, C-terminal domain BRM84_20160 PF01565 FAD binding domain BRM84_20165 PF00486 Transcriptional regulatory protein, C terminal BRM84_20165 PF00072 Response regulator receiver domain BRM84_20170 PF02702 Osmosensitive K+ channel His kinase sensor domain BRM84_20170 PF13493 Domain of unknown function (DUF4118) BRM84_20170 PF13492 GAF domain BRM84_20170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_20170 PF00512 His Kinase A (phospho-acceptor) domain BRM84_20175 PF02669 K+-transporting ATPase, c chain BRM84_20185 PF03814 Potassium-transporting ATPase A subunit BRM84_20210 PF00586 AIR synthase related protein, N-terminal domain BRM84_20210 PF02769 AIR synthase related protein, C-terminal domain BRM84_20215 PF01029 NusB family BRM84_20220 PF00885 6,7-dimethyl-8-ribityllumazine synthase BRM84_20225 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BRM84_20225 PF00925 GTP cyclohydrolase II BRM84_20230 PF00677 Lumazine binding domain BRM84_20240 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BRM84_20240 PF01872 RibD C-terminal domain BRM84_20250 PF03477 ATP cone domain BRM84_20260 PF00464 Serine hydroxymethyltransferase BRM84_20280 PF12848 ABC transporter BRM84_20280 PF00005 ABC transporter BRM84_20300 PF00756 Putative esterase BRM84_20310 PF00107 Zinc-binding dehydrogenase BRM84_20310 PF08240 Alcohol dehydrogenase GroES-like domain BRM84_20315 PF02583 Metal-sensitive transcriptional repressor BRM84_20325 PF00486 Transcriptional regulatory protein, C terminal BRM84_20325 PF00072 Response regulator receiver domain BRM84_20330 PF00512 His Kinase A (phospho-acceptor) domain BRM84_20330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_20330 PF00672 HAMP domain BRM84_20330 PF16527 Two-component sensor protein CpxA, periplasmic domain BRM84_20370 PF00512 His Kinase A (phospho-acceptor) domain BRM84_20370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_20370 PF00672 HAMP domain BRM84_20375 PF04107 Glutamate-cysteine ligase family 2(GCS2) BRM84_20390 PF01926 50S ribosome-binding GTPase BRM84_20395 PF00034 Cytochrome c BRM84_20425 PF05598 Transposase domain (DUF772) BRM84_20425 PF01609 Transposase DDE domain BRM84_20430 PF13291 ACT domain BRM84_20430 PF00291 Pyridoxal-phosphate dependent enzyme BRM84_20445 PF05598 Transposase domain (DUF772) BRM84_20445 PF01609 Transposase DDE domain BRM84_20455 PF01527 Transposase BRM84_20485 PF12627 Probable RNA and SrmB- binding site of polymerase A BRM84_20485 PF01966 HD domain BRM84_20485 PF01743 Poly A polymerase head domain BRM84_20500 PF05598 Transposase domain (DUF772) BRM84_20500 PF01609 Transposase DDE domain BRM84_20550 PF14883 Hypothetical glycosyl hydrolase family 13 BRM84_20550 PF01522 Polysaccharide deacetylase BRM84_20555 PF00535 Glycosyl transferase family 2 BRM84_20565 PF01979 Amidohydrolase family BRM84_20570 PF01380 SIS domain BRM84_20575 PF00356 Bacterial regulatory proteins, lacI family BRM84_20580 PF07690 Major Facilitator Superfamily BRM84_20600 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 BRM84_20600 PF02837 Glycosyl hydrolases family 2, sugar binding domain BRM84_20600 PF16355 Domain of unknown function (DUF4982) BRM84_20600 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BRM84_20600 PF00703 Glycosyl hydrolases family 2 BRM84_20655 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BRM84_20660 PF00512 His Kinase A (phospho-acceptor) domain BRM84_20660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_20665 PF00072 Response regulator receiver domain BRM84_20670 PF01590 GAF domain BRM84_20670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_20670 PF00512 His Kinase A (phospho-acceptor) domain BRM84_20670 PF08446 PAS fold BRM84_20670 PF00360 Phytochrome region BRM84_20675 PF04972 BON domain BRM84_20680 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BRM84_20680 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BRM84_20685 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BRM84_20685 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BRM84_20720 PF01467 Cytidylyltransferase-like BRM84_20720 PF00293 NUDIX domain BRM84_20730 PF00595 PDZ domain BRM84_20730 PF03572 Peptidase family S41 BRM84_20730 PF11818 C-terminal domain of tail specific protease (DUF3340) BRM84_20730 PF17804 Tail specific protease N-terminal domain BRM84_20740 PF12950 TaqI-like C-terminal specificity domain BRM84_20740 PF07669 Eco57I restriction-modification methylase BRM84_20745 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BRM84_20745 PF04055 Radical SAM superfamily BRM84_20750 PF03099 Biotin/lipoate A/B protein ligase family BRM84_20755 PF04359 Protein of unknown function (DUF493) BRM84_20770 PF00768 D-alanyl-D-alanine carboxypeptidase BRM84_20770 PF07943 Penicillin-binding protein 5, C-terminal domain BRM84_20780 PF03330 Lytic transglycolase BRM84_20780 PF05036 Sporulation related domain BRM84_20785 PF13406 Transglycosylase SLT domain BRM84_20800 PF01471 Putative peptidoglycan binding domain BRM84_20800 PF01476 LysM domain BRM84_20800 PF01510 N-acetylmuramoyl-L-alanine amidase BRM84_20845 PF01098 Cell cycle protein BRM84_20850 PF00905 Penicillin binding protein transpeptidase domain BRM84_20850 PF03717 Penicillin-binding Protein dimerisation domain BRM84_20860 PF04085 rod shape-determining protein MreC BRM84_20870 PF00294 pfkB family carbohydrate kinase BRM84_20890 PF13673 Acetyltransferase (GNAT) domain BRM84_20900 PF13533 Biotin-lipoyl like BRM84_20910 PF01209 ubiE/COQ5 methyltransferase family BRM84_20915 PF00990 Diguanylate cyclase, GGDEF domain BRM84_20915 PF17152 Periplasmic sensor domain BRM84_20920 PF11838 ERAP1-like C-terminal domain BRM84_20920 PF01433 Peptidase family M1 domain BRM84_20935 PF10431 C-terminal, D2-small domain, of ClpB protein BRM84_20935 PF00004 ATPase family associated with various cellular activities (AAA) BRM84_20935 PF07724 AAA domain (Cdc48 subfamily) BRM84_20940 PF00227 Proteasome subunit BRM84_20950 PF00589 Phage integrase family BRM84_20950 PF02899 Phage integrase, N-terminal SAM-like domain BRM84_20960 PF01678 Diaminopimelate epimerase BRM84_20975 PF00326 Prolyl oligopeptidase family BRM84_20975 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BRM84_20980 PF00155 Aminotransferase class I and II BRM84_20995 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BRM84_20995 PF00326 Prolyl oligopeptidase family BRM84_21020 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BRM84_21020 PF03900 Porphobilinogen deaminase, C-terminal domain BRM84_21025 PF04397 LytTr DNA-binding domain BRM84_21025 PF00072 Response regulator receiver domain BRM84_21030 PF07694 5TMR of 5TMR-LYT BRM84_21030 PF06580 Histidine kinase BRM84_21040 PF13632 Glycosyl transferase family group 2 BRM84_21075 PF01740 STAS domain BRM84_21075 PF00916 Sulfate permease family BRM84_21080 PF00553 Cellulose binding domain BRM84_21080 PF00150 Cellulase (glycosyl hydrolase family 5) BRM84_21095 PF00990 Diguanylate cyclase, GGDEF domain BRM84_21095 PF00563 EAL domain BRM84_21095 PF03707 Bacterial signalling protein N terminal repeat BRM84_21135 PF01204 Trehalase BRM84_21155 PF01544 CorA-like Mg2+ transporter protein BRM84_21165 PF00324 Amino acid permease BRM84_21175 PF00553 Cellulose binding domain BRM84_21175 PF00041 Fibronectin type III domain BRM84_21175 PF01341 Glycosyl hydrolases family 6 BRM84_21180 PF03330 Lytic transglycolase BRM84_21185 PF00892 EamA-like transporter family BRM84_21205 PF07759 Protein of unknown function (DUF1615) BRM84_21245 PF00106 short chain dehydrogenase BRM84_21265 PF00425 chorismate binding enzyme BRM84_21265 PF04715 Anthranilate synthase component I, N terminal region BRM84_21270 PF00781 Diacylglycerol kinase catalytic domain BRM84_21275 PF00583 Acetyltransferase (GNAT) family BRM84_21280 PF00834 Ribulose-phosphate 3 epimerase family BRM84_21285 PF05099 Tellurite resistance protein TerB BRM84_21285 PF00226 DnaJ domain BRM84_21290 PF01259 SAICAR synthetase BRM84_21340 PF00361 Proton-conducting membrane transporter BRM84_21340 PF13244 Domain of unknown function (DUF4040) BRM84_21340 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BRM84_21340 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BRM84_21345 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BRM84_21350 PF00361 Proton-conducting membrane transporter BRM84_21360 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BRM84_21365 PF03334 Na+/H+ antiporter subunit BRM84_21375 PF04209 homogentisate 1,2-dioxygenase BRM84_21380 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BRM84_21385 PF01047 MarR family BRM84_21395 PF00854 POT family BRM84_21400 PF03301 Tryptophan 2,3-dioxygenase BRM84_21410 PF00676 Dehydrogenase E1 component BRM84_21445 PF00108 Thiolase, N-terminal domain BRM84_21445 PF02803 Thiolase, C-terminal domain BRM84_21500 PF01609 Transposase DDE domain BRM84_21500 PF05598 Transposase domain (DUF772) BRM84_21530 PF01427 D-ala-D-ala dipeptidase BRM84_21535 PF01510 N-acetylmuramoyl-L-alanine amidase BRM84_21545 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BRM84_21545 PF13378 Enolase C-terminal domain-like BRM84_21585 PF13520 Amino acid permease BRM84_21620 PF05360 yiaA/B two helix domain BRM84_21625 PF07995 Glucose / Sorbosone dehydrogenase BRM84_21660 PF00933 Glycosyl hydrolase family 3 N terminal domain BRM84_21660 PF14310 Fibronectin type III-like domain BRM84_21660 PF01915 Glycosyl hydrolase family 3 C-terminal domain BRM84_21665 PF02152 Dihydroneopterin aldolase BRM84_21670 PF00814 Glycoprotease family BRM84_21675 PF01165 Ribosomal protein S21 BRM84_21680 PF09424 Yqey-like protein BRM84_21695 PF03631 Virulence factor BrkB BRM84_21700 PF08275 DNA primase catalytic core, N-terminal domain BRM84_21700 PF08278 DNA primase DnaG DnaB-binding BRM84_21700 PF01807 CHC2 zinc finger BRM84_21700 PF10410 DnaB-helicase binding domain of primase BRM84_21720 PF13593 SBF-like CPA transporter family (DUF4137) BRM84_21735 PF01040 UbiA prenyltransferase family BRM84_21760 PF00510 Cytochrome c oxidase subunit III BRM84_21765 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 BRM84_21775 PF00115 Cytochrome C and Quinol oxidase polypeptide I BRM84_21780 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BRM84_21780 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BRM84_21790 PF14850 DNA-binding domain of Proline dehydrogenase BRM84_21790 PF00171 Aldehyde dehydrogenase family BRM84_21790 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BRM84_21790 PF01619 Proline dehydrogenase BRM84_21805 PF00210 Ferritin-like domain BRM84_21815 PF00293 NUDIX domain BRM84_21830 PF00380 Ribosomal protein S9/S16 BRM84_21835 PF00572 Ribosomal protein L13 BRM84_21840 PF03232 Ubiquinone biosynthesis protein COQ7 BRM84_21845 PF00893 Small Multidrug Resistance protein BRM84_21850 PF02675 S-adenosylmethionine decarboxylase BRM84_21855 PF00325 Bacterial regulatory proteins, crp family BRM84_21855 PF00027 Cyclic nucleotide-binding domain BRM84_21865 PF00218 Indole-3-glycerol phosphate synthase BRM84_21870 PF00591 Glycosyl transferase family, a/b domain BRM84_21870 PF02885 Glycosyl transferase family, helical bundle domain BRM84_21885 PF00117 Glutamine amidotransferase class-I BRM84_21910 PF03971 Monomeric isocitrate dehydrogenase BRM84_21920 PF05598 Transposase domain (DUF772) BRM84_21950 PF01609 Transposase DDE domain BRM84_21950 PF05598 Transposase domain (DUF772) BRM84_21965 PF00872 Transposase, Mutator family BRM84_21980 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BRM84_21980 PF14489 QueF-like protein BRM84_21990 PF07687 Peptidase dimerisation domain BRM84_21990 PF01546 Peptidase family M20/M25/M40 BRM84_21995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BRM84_22000 PF00873 AcrB/AcrD/AcrF family BRM84_22005 PF00873 AcrB/AcrD/AcrF family BRM84_22015 PF07063 Domain of unknown function (DUF1338) BRM84_22055 PF00581 Rhodanese-like domain BRM84_22060 PF02556 Preprotein translocase subunit SecB BRM84_22065 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BRM84_22065 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BRM84_22075 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BRM84_22075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BRM84_22075 PF00205 Thiamine pyrophosphate enzyme, central domain BRM84_22080 PF00512 His Kinase A (phospho-acceptor) domain BRM84_22080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_22085 PF02954 Bacterial regulatory protein, Fis family BRM84_22085 PF00072 Response regulator receiver domain BRM84_22085 PF00158 Sigma-54 interaction domain BRM84_22100 PF07690 Major Facilitator Superfamily BRM84_22105 PF00588 SpoU rRNA Methylase family BRM84_22120 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BRM84_22120 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BRM84_22125 PF13784 Fic/DOC family N-terminal BRM84_22125 PF02661 Fic/DOC family BRM84_22130 PF01555 DNA methylase BRM84_22140 PF00561 alpha/beta hydrolase fold BRM84_22145 PF03692 Putative zinc- or iron-chelating domain BRM84_22150 PF00501 AMP-binding enzyme BRM84_22155 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BRM84_22170 PF05598 Transposase domain (DUF772) BRM84_22185 PF11871 Domain of unknown function (DUF3391) BRM84_22185 PF01966 HD domain BRM84_22190 PF07690 Major Facilitator Superfamily BRM84_22215 PF00132 Bacterial transferase hexapeptide (six repeats) BRM84_22220 PF03692 Putative zinc- or iron-chelating domain BRM84_22225 PF00920 Dehydratase family BRM84_22230 PF13495 Phage integrase, N-terminal SAM-like domain BRM84_22230 PF00589 Phage integrase family BRM84_22250 PF01609 Transposase DDE domain BRM84_22250 PF05598 Transposase domain (DUF772) BRM84_22260 PF01218 Coproporphyrinogen III oxidase BRM84_22275 PF01612 3'-5' exonuclease BRM84_22275 PF00476 DNA polymerase family A BRM84_22275 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BRM84_22275 PF01367 5'-3' exonuclease, C-terminal SAM fold BRM84_22295 PF00456 Transketolase, thiamine diphosphate binding domain BRM84_22295 PF17831 Pyruvate dehydrogenase E1 component middle domain BRM84_22310 PF03377 TAL effector repeat BRM84_22325 PF13276 HTH-like domain BRM84_22325 PF00665 Integrase core domain BRM84_22325 PF13333 Integrase core domain BRM84_22330 PF01527 Transposase BRM84_22360 PF04264 YceI-like domain BRM84_22365 PF00881 Nitroreductase family BRM84_22390 PF02592 Putative vitamin uptake transporter BRM84_22395 PF03710 Glutamate-ammonia ligase adenylyltransferase BRM84_22395 PF08335 GlnD PII-uridylyltransferase BRM84_22405 PF08450 SMP-30/Gluconolactonase/LRE-like region BRM84_22445 PF00793 DAHP synthetase I family BRM84_22460 PF00593 TonB dependent receptor BRM84_22460 PF07715 TonB-dependent Receptor Plug Domain BRM84_22470 PF00118 TCP-1/cpn60 chaperonin family BRM84_22475 PF00166 Chaperonin 10 Kd subunit BRM84_22495 PF07992 Pyridine nucleotide-disulphide oxidoreductase BRM84_22505 PF04545 Sigma-70, region 4 BRM84_22505 PF04542 Sigma-70 region 2 BRM84_22510 PF03167 Uracil DNA glycosylase superfamily BRM84_22515 PF00072 Response regulator receiver domain BRM84_22520 PF18075 FtsX extracellular domain BRM84_22525 PF00005 ABC transporter BRM84_22530 PF12300 ATP-dependent RNA helicase RhlB BRM84_22530 PF00270 DEAD/DEAH box helicase BRM84_22530 PF00271 Helicase conserved C-terminal domain BRM84_22535 PF00085 Thioredoxin BRM84_22540 PF07498 Rho termination factor, N-terminal domain BRM84_22540 PF07497 Rho termination factor, RNA-binding domain BRM84_22540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BRM84_22555 PF17243 POTRA domain TamA domain 1 BRM84_22555 PF01103 Surface antigen BRM84_22560 PF04357 TamB, inner membrane protein subunit of TAM complex BRM84_22595 PF07977 FabA-like domain BRM84_22600 PF01553 Acyltransferase BRM84_22610 PF00550 Phosphopantetheine attachment site BRM84_22615 PF04820 Tryptophan halogenase BRM84_22670 PF01638 HxlR-like helix-turn-helix BRM84_22675 PF05368 NmrA-like family BRM84_22690 PF03812 2-keto-3-deoxygluconate permease BRM84_22695 PF08267 Cobalamin-independent synthase, N-terminal domain BRM84_22695 PF01717 Cobalamin-independent synthase, Catalytic domain BRM84_22705 PF03358 NADPH-dependent FMN reductase BRM84_22710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BRM84_22710 PF03466 LysR substrate binding domain BRM84_22715 PF02677 Epoxyqueuosine reductase QueH BRM84_22735 PF00072 Response regulator receiver domain BRM84_22735 PF00486 Transcriptional regulatory protein, C terminal BRM84_22740 PF00551 Formyl transferase BRM84_22760 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BRM84_22760 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BRM84_22765 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BRM84_22770 PF02146 Sir2 family BRM84_22780 PF07690 Major Facilitator Superfamily BRM84_22785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BRM84_22785 PF03466 LysR substrate binding domain BRM84_22805 PF01026 TatD related DNase BRM84_22855 PF00266 Aminotransferase class-V BRM84_22870 PF01014 Uricase BRM84_22870 PF09349 OHCU decarboxylase BRM84_22920 PF00326 Prolyl oligopeptidase family BRM84_22925 PF00364 Biotin-requiring enzyme BRM84_22925 PF02785 Biotin carboxylase C-terminal domain BRM84_22925 PF00289 Biotin carboxylase, N-terminal domain BRM84_22925 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BRM84_22930 PF01039 Carboxyl transferase domain BRM84_22935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BRM84_22935 PF02770 Acyl-CoA dehydrogenase, middle domain BRM84_22935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BRM84_22990 PF07683 Cobalamin synthesis protein cobW C-terminal domain BRM84_22990 PF02492 CobW/HypB/UreG, nucleotide-binding domain BRM84_23010 PF03969 AFG1-like ATPase BRM84_23025 PF00593 TonB dependent receptor BRM84_23025 PF07715 TonB-dependent Receptor Plug Domain BRM84_23030 PF13181 Tetratricopeptide repeat BRM84_23035 PF02092 Glycyl-tRNA synthetase beta subunit BRM84_23035 PF05746 DALR anticodon binding domain BRM84_23040 PF02091 Glycyl-tRNA synthetase alpha subunit BRM84_23045 PF00437 Type II/IV secretion system protein BRM84_23045 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BRM84_23070 PF00117 Glutamine amidotransferase class-I BRM84_23070 PF00958 GMP synthase C terminal domain BRM84_23080 PF00902 Sec-independent protein translocase protein (TatC) BRM84_23085 PF02416 mttA/Hcf106 family BRM84_23090 PF02416 mttA/Hcf106 family BRM84_23100 PF00762 Ferrochelatase BRM84_23105 PF12697 Alpha/beta hydrolase family BRM84_23130 PF04381 Putative exonuclease, RdgC BRM84_23135 PF01171 PP-loop family BRM84_23150 PF00356 Bacterial regulatory proteins, lacI family BRM84_23155 PF03648 Glycosyl hydrolase family 67 N-terminus BRM84_23155 PF07488 Glycosyl hydrolase family 67 middle domain BRM84_23155 PF07477 Glycosyl hydrolase family 67 C-terminus BRM84_23165 PF13378 Enolase C-terminal domain-like BRM84_23165 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BRM84_23170 PF04616 Glycosyl hydrolases family 43 BRM84_23170 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BRM84_23175 PF01915 Glycosyl hydrolase family 3 C-terminal domain BRM84_23175 PF07691 PA14 domain BRM84_23175 PF00933 Glycosyl hydrolase family 3 N terminal domain BRM84_23175 PF14310 Fibronectin type III-like domain BRM84_23180 PF08125 Mannitol dehydrogenase C-terminal domain BRM84_23180 PF01232 Mannitol dehydrogenase Rossmann domain BRM84_23200 PF02614 Glucuronate isomerase BRM84_23205 PF00331 Glycosyl hydrolase family 10 BRM84_23205 PF03422 Carbohydrate binding module (family 6) BRM84_23205 PF00553 Cellulose binding domain BRM84_23235 PF04616 Glycosyl hydrolases family 43 BRM84_23275 PF12792 CSS motif domain associated with EAL BRM84_23275 PF00563 EAL domain BRM84_23280 PF00487 Fatty acid desaturase BRM84_23285 PF00970 Oxidoreductase FAD-binding domain BRM84_23285 PF00175 Oxidoreductase NAD-binding domain BRM84_23285 PF00111 2Fe-2S iron-sulfur cluster binding domain BRM84_23290 PF00440 Bacterial regulatory proteins, tetR family BRM84_23325 PF01047 MarR family BRM84_23330 PF02566 OsmC-like protein BRM84_23425 PF01381 Helix-turn-helix BRM84_23430 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB BRM84_23435 PF13538 UvrD-like helicase C-terminal domain BRM84_23440 PF00580 UvrD/REP helicase N-terminal domain BRM84_23440 PF12705 PD-(D/E)XK nuclease superfamily BRM84_23440 PF13361 UvrD-like helicase C-terminal domain BRM84_23445 PF17946 RecC C-terminal domain BRM84_23485 PF00080 Copper/zinc superoxide dismutase (SODC) BRM84_23490 PF00080 Copper/zinc superoxide dismutase (SODC) BRM84_23495 PF02954 Bacterial regulatory protein, Fis family BRM84_23495 PF00158 Sigma-54 interaction domain BRM84_23495 PF00072 Response regulator receiver domain BRM84_23500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BRM84_23500 PF00512 His Kinase A (phospho-acceptor) domain BRM84_23500 PF00989 PAS fold BRM84_23505 PF00909 Ammonium Transporter Family BRM84_23510 PF00543 Nitrogen regulatory protein P-II BRM84_23515 PF00120 Glutamine synthetase, catalytic domain BRM84_23515 PF03951 Glutamine synthetase, beta-Grasp domain BRM84_23520 PF02673 Bacitracin resistance protein BacA BRM84_23560 PF03061 Thioesterase superfamily BRM84_23565 PF13091 PLD-like domain BRM84_23580 PF10609 NUBPL iron-transfer P-loop NTPase BRM84_23580 PF01883 Iron-sulfur cluster assembly protein BRM84_23600 PF01381 Helix-turn-helix BRM84_23605 PF13657 HipA N-terminal domain BRM84_23605 PF07804 HipA-like C-terminal domain BRM84_23610 PF10017 Histidine-specific methyltransferase, SAM-dependent BRM84_23615 PF03781 Sulfatase-modifying factor enzyme 1 BRM84_23615 PF12867 DinB superfamily BRM84_23625 PF00528 Binding-protein-dependent transport system inner membrane component BRM84_23630 PF00005 ABC transporter BRM84_23630 PF00571 CBS domain BRM84_23645 PF00005 ABC transporter BRM84_23655 PF01734 Patatin-like phospholipase BRM84_23670 PF01609 Transposase DDE domain BRM84_23670 PF05598 Transposase domain (DUF772) BRM84_23695 PF00248 Aldo/keto reductase family BRM84_23700 PF00107 Zinc-binding dehydrogenase BRM84_23700 PF16884 N-terminal domain of oxidoreductase BRM84_23705 PF00248 Aldo/keto reductase family BRM84_23715 PF00849 RNA pseudouridylate synthase BRM84_23730 PF00270 DEAD/DEAH box helicase BRM84_23730 PF08482 ATP-dependent helicase C-terminal BRM84_23730 PF00271 Helicase conserved C-terminal domain BRM84_23730 PF04408 Helicase associated domain (HA2) BRM84_23735 PF07308 Protein of unknown function (DUF1456) BRM84_23740 PF13378 Enolase C-terminal domain-like BRM84_23740 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BRM84_23750 PF01557 Fumarylacetoacetate (FAA) hydrolase family BRM84_23765 PF00248 Aldo/keto reductase family BRM84_23775 PF04616 Glycosyl hydrolases family 43 BRM84_23775 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BRM84_23800 PF00072 Response regulator receiver domain BRM84_23800 PF00196 Bacterial regulatory proteins, luxR family BRM84_23805 PF00501 AMP-binding enzyme BRM84_23805 PF13193 AMP-binding enzyme C-terminal domain BRM84_23805 PF16177 Acetyl-coenzyme A synthetase N-terminus BRM84_23820 PF04341 Protein of unknown function, DUF485 BRM84_23825 PF00474 Sodium:solute symporter family BRM84_23840 PF03372 Endonuclease/Exonuclease/phosphatase family BRM84_23850 PF04226 Transglycosylase associated protein BRM84_23855 PF01648 4'-phosphopantetheinyl transferase superfamily BRM84_23860 PF16655 PhoD-like phosphatase, N-terminal domain BRM84_23860 PF09423 PhoD-like phosphatase BRM84_23865 PF16655 PhoD-like phosphatase, N-terminal domain BRM84_23865 PF09423 PhoD-like phosphatase BRM84_23870 PF02527 rRNA small subunit methyltransferase G BRM84_23885 PF00830 Ribosomal L28 family BRM84_23890 PF00471 Ribosomal protein L33 BRM84_23895 PF04909 Amidohydrolase BRM84_23915 PF04303 PrpF protein BRM84_23920 PF03737 Aldolase/RraA BRM84_23925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BRM84_23925 PF03466 LysR substrate binding domain BRM84_23930 PF13396 Phospholipase_D-nuclease N-terminal BRM84_23930 PF13091 PLD-like domain BRM84_23950 PF13361 UvrD-like helicase C-terminal domain BRM84_23950 PF00580 UvrD/REP helicase N-terminal domain BRM84_23965 PF13520 Amino acid permease BRM84_23975 PF02646 RmuC family BRM84_23985 PF00255 Glutathione peroxidase BRM84_24005 PF04055 Radical SAM superfamily BRM84_24015 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BRM84_24030 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BRM84_24030 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BRM84_24040 PF13180 PDZ domain BRM84_24040 PF03572 Peptidase family S41 BRM84_24045 PF01551 Peptidase family M23 BRM84_24055 PF04389 Peptidase family M28 BRM84_24105 PF02463 RecF/RecN/SMC N terminal domain BRM84_24110 PF01227 GTP cyclohydrolase I BRM84_24135 PF00083 Sugar (and other) transporter BRM84_24240 PF02595 Glycerate kinase family BRM84_24245 PF07690 Major Facilitator Superfamily BRM84_24260 PF17785 PUA-like domain BRM84_24260 PF10672 S-adenosylmethionine-dependent methyltransferase BRM84_24270 PF03741 Integral membrane protein TerC family BRM84_24275 PF01694 Rhomboid family BRM84_24280 PF03009 Glycerophosphoryl diester phosphodiesterase family BRM84_24290 PF01569 PAP2 superfamily BRM84_24295 PF10396 GTP-binding protein TrmE N-terminus BRM84_24295 PF12631 MnmE helical domain BRM84_24295 PF01926 50S ribosome-binding GTPase BRM84_24300 PF01522 Polysaccharide deacetylase BRM84_24305 PF14849 YidC periplasmic domain BRM84_24305 PF02096 60Kd inner membrane protein BRM84_24310 PF00825 Ribonuclease P BRM84_24315 PF00468 Ribosomal protein L34