BRM88_00010 IPR001001 DNA polymerase III, beta chain BRM88_00010 IPR022634 DNA polymerase III, beta chain, N-terminal BRM88_00010 IPR022635 DNA polymerase III, beta chain, C-terminal BRM88_00010 IPR022637 DNA polymerase III, beta chain, central BRM88_00020 IPR001238 DNA-binding, RecF BRM88_00020 IPR003395 RecF/RecN/SMC, N-terminal BRM88_00020 IPR018078 DNA-binding, RecF, conserved site BRM88_00020 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_00025 IPR000565 DNA topoisomerase, type IIA, subunit B BRM88_00025 IPR001241 DNA topoisomerase, type IIA BRM88_00025 IPR002288 DNA gyrase B subunit, C-terminal BRM88_00025 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_00025 IPR006171 Toprim domain BRM88_00025 IPR011557 DNA gyrase, subunit B BRM88_00025 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 BRM88_00025 IPR013759 DNA topoisomerase, type IIA, central domain BRM88_00025 IPR013760 DNA topoisomerase, type IIA-like domain BRM88_00025 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BRM88_00025 IPR018522 DNA topoisomerase, type IIA, conserved site BRM88_00025 IPR020568 Ribosomal protein S5 domain 2-type fold BRM88_00025 IPR036890 BRM88_00025 BRM88_00030 IPR003675 CAAX amino terminal protease BRM88_00035 IPR001915 Peptidase M48 BRM88_00040 IPR011990 Tetratricopeptide-like helical domain BRM88_00040 IPR015374 Chs5p-Arf1p binding BRM88_00040 IPR019734 Tetratricopeptide repeat BRM88_00045 IPR006260 TonB, C-terminal BRM88_00045 IPR037682 BRM88_00045 BRM88_00050 IPR002898 MotA/TolQ/ExbB proton channel BRM88_00055 IPR003400 Biopolymer transport protein ExbD/TolR BRM88_00060 IPR003400 Biopolymer transport protein ExbD/TolR BRM88_00065 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ BRM88_00065 IPR013785 Aldolase-type TIM barrel BRM88_00065 IPR036130 BRM88_00065 BRM88_00075 IPR001736 Phospholipase D/Transphosphatidylase BRM88_00075 IPR022924 Cardiolipin synthase BRM88_00075 IPR025202 Phospholipase D-like domain BRM88_00085 IPR000146 Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase BRM88_00085 IPR028343 Fructose-1,6-bisphosphatase BRM88_00085 IPR033391 BRM88_00085 BRM88_00090 IPR000796 Aspartate/other aminotransferase BRM88_00090 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site BRM88_00090 IPR004839 Aminotransferase, class I/classII BRM88_00090 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BRM88_00090 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BRM88_00090 IPR015424 Pyridoxal phosphate-dependent transferase BRM88_00095 IPR000531 TonB-dependent receptor, beta-barrel BRM88_00095 IPR012910 TonB-dependent receptor, plug BRM88_00095 IPR036942 BRM88_00095 BRM88_00095 IPR037066 BRM88_00095 BRM88_00110 IPR002559 Transposase, IS4-like BRM88_00110 IPR008490 Transposase InsH, N-terminal BRM88_00115 IPR000262 FMN-dependent dehydrogenase BRM88_00115 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site BRM88_00115 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent BRM88_00115 IPR013785 Aldolase-type TIM barrel BRM88_00115 IPR020920 L-lactate dehydrogenase, bacterial BRM88_00120 IPR007318 Phospholipid methyltransferase BRM88_00135 IPR010758 Trans-2-enoyl-CoA reductase BRM88_00135 IPR024906 Enoyl reductase FAD binding domain BRM88_00135 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative BRM88_00145 IPR011611 Carbohydrate kinase PfkB BRM88_00145 IPR029056 Ribokinase-like BRM88_00155 IPR002559 Transposase, IS4-like BRM88_00155 IPR008490 Transposase InsH, N-terminal BRM88_00160 IPR003439 ABC transporter-like BRM88_00160 IPR003593 AAA+ ATPase domain BRM88_00160 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_00170 IPR002559 Transposase, IS4-like BRM88_00170 IPR008490 Transposase InsH, N-terminal BRM88_00210 IPR002559 Transposase, IS4-like BRM88_00210 IPR008490 Transposase InsH, N-terminal BRM88_00220 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site BRM88_00220 IPR001650 Helicase, C-terminal BRM88_00220 IPR011545 DEAD/DEAH box helicase domain BRM88_00220 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BRM88_00220 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_00235 IPR010694 Uncharacterised protein family VirK BRM88_00240 IPR003953 FAD binding domain BRM88_00240 IPR036188 BRM88_00240 BRM88_00240 IPR038732 BRM88_00240 BRM88_00260 IPR029108 Putative toxin 57 BRM88_00275 IPR002559 Transposase, IS4-like BRM88_00275 IPR012337 Ribonuclease H-like domain BRM88_00305 IPR024442 Transposase, zinc-ribbon BRM88_00305 IPR024445 Transposase, ISXO2-like BRM88_00315 IPR012337 Ribonuclease H-like domain BRM88_00315 IPR038721 BRM88_00315 BRM88_00325 IPR004852 Di-haem cytochrome c peroxidase BRM88_00325 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase BRM88_00325 IPR036909 BRM88_00325 BRM88_00335 IPR016040 NAD(P)-binding domain BRM88_00335 IPR036291 BRM88_00335 BRM88_00340 IPR004193 Glycoside hydrolase, family 13, N-terminal BRM88_00340 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BRM88_00340 IPR011837 Glycogen debranching enzyme, GlgX type BRM88_00340 IPR013780 Glycosyl hydrolase, family 13, all-beta BRM88_00340 IPR013783 Immunoglobulin-like fold BRM88_00340 IPR014756 Immunoglobulin E-set BRM88_00340 IPR017853 Glycoside hydrolase, superfamily BRM88_00345 IPR021327 Protein of unknown function DUF2934 BRM88_00350 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BRM88_00350 IPR012767 Malto-oligosyltrehalose synthase BRM88_00350 IPR017853 Glycoside hydrolase, superfamily BRM88_00355 IPR003385 Glycoside hydrolase, family 77 BRM88_00355 IPR017853 Glycoside hydrolase, superfamily BRM88_00360 IPR004193 Glycoside hydrolase, family 13, N-terminal BRM88_00360 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BRM88_00360 IPR012768 Malto-oligosyltrehalose trehalohydrolase BRM88_00360 IPR013783 Immunoglobulin-like fold BRM88_00360 IPR014756 Immunoglobulin E-set BRM88_00360 IPR017853 Glycoside hydrolase, superfamily BRM88_00360 IPR022567 Domain of unknown function DUF3459 BRM88_00365 IPR004193 Glycoside hydrolase, family 13, N-terminal BRM88_00365 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BRM88_00365 IPR006048 Alpha-amylase, C-terminal all beta BRM88_00365 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB BRM88_00365 IPR013780 Glycosyl hydrolase, family 13, all-beta BRM88_00365 IPR013783 Immunoglobulin-like fold BRM88_00365 IPR014756 Immunoglobulin E-set BRM88_00365 IPR017853 Glycoside hydrolase, superfamily BRM88_00365 IPR037439 BRM88_00365 BRM88_00370 IPR001296 Glycosyl transferase, family 1 BRM88_00370 IPR011835 Glycogen/starch synthase, ADP-glucose type BRM88_00370 IPR013534 Starch synthase, catalytic domain BRM88_00375 IPR000160 GGDEF domain BRM88_00375 IPR029787 Nucleotide cyclase BRM88_00380 IPR003790 Protein of unknown function DUF187 BRM88_00380 IPR013785 Aldolase-type TIM barrel BRM88_00380 IPR017853 Glycoside hydrolase, superfamily BRM88_00385 IPR008526 Inner membrane protein YedI BRM88_00395 IPR004147 UbiB domain BRM88_00395 IPR011009 Protein kinase-like domain BRM88_00410 IPR006685 Mechanosensitive ion channel MscS BRM88_00410 IPR010920 Like-Sm (LSM) domain BRM88_00410 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 BRM88_00410 IPR011066 Mechanosensitive ion channel MscS, C-terminal BRM88_00410 IPR022249 Protein of unknown function DUF3772 BRM88_00410 IPR023408 BRM88_00410 BRM88_00415 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein BRM88_00415 IPR036567 BRM88_00415 BRM88_00435 IPR008258 Lytic transglycosylase-like SLT domain BRM88_00435 IPR023346 Lysozyme-like domain BRM88_00445 IPR003522 Type III secretion system outer membrane pore YscC/HrcC BRM88_00445 IPR004845 Type II secretion system GspD, conserved site BRM88_00445 IPR004846 Type II/III secretion system BRM88_00445 IPR005644 NolW-like BRM88_00445 IPR038591 BRM88_00445 BRM88_00450 IPR002010 Type III secretion system inner membrane R protein BRM88_00450 IPR006304 Type III secretion protein SpaR/YscT BRM88_00455 IPR013392 Type III secretion protein HrpB7 BRM88_00460 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BRM88_00460 IPR003593 AAA+ ATPase domain BRM88_00460 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain BRM88_00460 IPR005714 ATPase, type III secretion system, FliI/YscN BRM88_00460 IPR013380 ATPase, type III secretion system, H+-transporting BRM88_00460 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site BRM88_00460 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_00465 IPR012842 Type III secretion system HrpE/YscL BRM88_00465 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE BRM88_00470 IPR013393 Type III secretion protein HrpB4 BRM88_00475 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ BRM88_00475 IPR006182 Secretory protein YscJ/FliF BRM88_00480 IPR013391 Type III secretion protein HrpB2 BRM88_00485 IPR013394 Type III secretion system, HrpB1/HrpK BRM88_00490 IPR006135 Type III secretion system substrate exporter BRM88_00490 IPR006307 Type III exporter system, secretion apparatus protein BsaZ BRM88_00490 IPR029025 Type III secretion system substrate exporter, C-terminal BRM88_00495 IPR001712 Type III secretion system FHIPEP BRM88_00495 IPR025505 FHIPEP conserved site BRM88_00500 IPR013390 Type III secretion protein HpaP BRM88_00505 IPR001543 Surface presentation of antigen (SpoA) BRM88_00505 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO BRM88_00505 IPR036429 BRM88_00505 BRM88_00510 IPR005773 Yop virulence translocation protein R BRM88_00510 IPR005838 Type III secretion system inner membrane P protein BRM88_00515 IPR002191 Bacterial export protein family 3 BRM88_00515 IPR006306 Type III secretion protein HrpO BRM88_00540 IPR010261 Tir chaperone protein (CesT) family BRM88_00570 IPR002559 Transposase, IS4-like BRM88_00570 IPR008490 Transposase InsH, N-terminal BRM88_00575 IPR012337 Ribonuclease H-like domain BRM88_00575 IPR038721 BRM88_00575 BRM88_00580 IPR002559 Transposase, IS4-like BRM88_00580 IPR008490 Transposase InsH, N-terminal BRM88_00585 IPR008718 NolX BRM88_00590 IPR001611 Leucine-rich repeat BRM88_00590 IPR003591 Leucine-rich repeat, typical subtype BRM88_00590 IPR032675 BRM88_00590 BRM88_00615 IPR001478 PDZ domain BRM88_00615 IPR001940 Peptidase S1C BRM88_00615 IPR009003 Trypsin-like cysteine/serine peptidase domain BRM88_00615 IPR011782 Peptidase S1C, Do BRM88_00615 IPR036034 BRM88_00615 BRM88_00625 IPR036890 BRM88_00625 BRM88_00635 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain BRM88_00635 IPR010099 Sugar nucleotide epimerase YfcH,-like putative BRM88_00635 IPR013549 Domain of unknown function DUF1731 BRM88_00635 IPR036291 BRM88_00635 BRM88_00645 IPR002559 Transposase, IS4-like BRM88_00645 IPR008490 Transposase InsH, N-terminal BRM88_00665 IPR009057 Homeodomain-like BRM88_00665 IPR025959 Winged helix-turn helix domain BRM88_00665 IPR038717 BRM88_00665 BRM88_00670 IPR001584 Integrase, catalytic core BRM88_00670 IPR012337 Ribonuclease H-like domain BRM88_00670 IPR036397 BRM88_00670 BRM88_00690 IPR000086 NUDIX hydrolase domain BRM88_00690 IPR015797 NUDIX hydrolase domain-like BRM88_00690 IPR020084 NUDIX hydrolase, conserved site BRM88_00690 IPR020476 NUDIX hydrolase BRM88_00700 IPR019291 Host attachment protein BRM88_00715 IPR012337 Ribonuclease H-like domain BRM88_00715 IPR025246 Transposase IS30-like HTH domain BRM88_00725 IPR006143 RND efflux pump, membrane fusion protein BRM88_00725 IPR032317 BRM88_00725 BRM88_00735 IPR003439 ABC transporter-like BRM88_00735 IPR003593 AAA+ ATPase domain BRM88_00735 IPR017871 ABC transporter, conserved site BRM88_00735 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_00740 IPR003838 Permease FtsX-like BRM88_00740 IPR025857 MacB-like periplasmic core domain BRM88_00745 IPR003838 Permease FtsX-like BRM88_00745 IPR025857 MacB-like periplasmic core domain BRM88_00760 IPR014944 Toxin SymE-like BRM88_00770 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family BRM88_00770 IPR035093 BRM88_00770 BRM88_00775 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM BRM88_00775 IPR036165 BRM88_00775 BRM88_00780 IPR004254 Hly-III-related BRM88_00785 IPR001650 Helicase, C-terminal BRM88_00785 IPR011545 DEAD/DEAH box helicase domain BRM88_00785 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BRM88_00785 IPR018973 DEAD/DEAH-box helicase, putative BRM88_00785 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_00790 IPR012337 Ribonuclease H-like domain BRM88_00790 IPR038720 BRM88_00790 BRM88_00795 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain BRM88_00795 IPR030395 BRM88_00795 BRM88_00800 IPR000600 ROK BRM88_00800 IPR036388 BRM88_00800 BRM88_00800 IPR036390 BRM88_00800 BRM88_00805 IPR000531 TonB-dependent receptor, beta-barrel BRM88_00805 IPR010104 Bacterial TonB-dependent receptor BRM88_00805 IPR012910 TonB-dependent receptor, plug BRM88_00805 IPR036942 BRM88_00805 BRM88_00805 IPR037066 BRM88_00805 BRM88_00810 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase BRM88_00810 IPR012390 Phosphoesterase SP1827 BRM88_00810 IPR015069 Domain of unknown function DUF1868 BRM88_00815 IPR005097 Saccharopine dehydrogenase / Homospermidine synthase BRM88_00815 IPR036291 BRM88_00815 BRM88_00835 IPR011010 DNA breaking-rejoining enzyme, catalytic core BRM88_00835 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type BRM88_00835 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type BRM88_00835 IPR035447 BRM88_00835 BRM88_00840 IPR021719 Proteinase inhibitor I78 BRM88_00845 IPR002489 Glutamate synthase, alpha subunit, C-terminal BRM88_00845 IPR002932 Glutamate synthase domain BRM88_00845 IPR006982 Glutamate synthase, central-N BRM88_00845 IPR013785 Aldolase-type TIM barrel BRM88_00845 IPR017932 Glutamine amidotransferase type 2 domain BRM88_00845 IPR029055 Nucleophile aminohydrolases, N-terminal BRM88_00845 IPR036485 BRM88_00845 BRM88_00850 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 BRM88_00850 IPR009051 Alpha-helical ferredoxin BRM88_00850 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain BRM88_00850 IPR028261 Dihydroprymidine dehydrogenase domain II BRM88_00850 IPR036188 BRM88_00850 BRM88_00865 IPR024442 Transposase, zinc-ribbon BRM88_00865 IPR024445 Transposase, ISXO2-like BRM88_00890 IPR002559 Transposase, IS4-like BRM88_00890 IPR008490 Transposase InsH, N-terminal BRM88_00900 IPR000843 Transcription regulator HTH, LacI BRM88_00900 IPR010982 Lambda repressor-like, DNA-binding domain BRM88_00900 IPR028082 Periplasmic binding protein-like I BRM88_00915 IPR013320 Concanavalin A-like lectin/glucanase, subgroup BRM88_00930 IPR004193 Glycoside hydrolase, family 13, N-terminal BRM88_00930 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BRM88_00930 IPR006048 Alpha-amylase, C-terminal all beta BRM88_00930 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB BRM88_00930 IPR013780 Glycosyl hydrolase, family 13, all-beta BRM88_00930 IPR013783 Immunoglobulin-like fold BRM88_00930 IPR014756 Immunoglobulin E-set BRM88_00930 IPR017853 Glycoside hydrolase, superfamily BRM88_00930 IPR037439 BRM88_00930 BRM88_00935 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BRM88_00935 IPR011009 Protein kinase-like domain BRM88_00935 IPR012810 Trehalose synthase/alpha-amylase, N-terminal BRM88_00935 IPR012811 Trehalose synthase/probable maltokinase, C-terminal domain BRM88_00935 IPR013780 Glycosyl hydrolase, family 13, all-beta BRM88_00935 IPR017853 Glycoside hydrolase, superfamily BRM88_00935 IPR032091 BRM88_00935 BRM88_00940 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BRM88_00940 IPR013780 Glycosyl hydrolase, family 13, all-beta BRM88_00940 IPR013783 Immunoglobulin-like fold BRM88_00940 IPR017853 Glycoside hydrolase, superfamily BRM88_00940 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S BRM88_00940 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase BRM88_00990 IPR012337 Ribonuclease H-like domain BRM88_00990 IPR038721 BRM88_00990 BRM88_00995 IPR000523 Magnesium chelatase, ChlI subunit BRM88_00995 IPR001208 Mini-chromosome maintenance, DNA-dependent ATPase BRM88_00995 IPR003593 AAA+ ATPase domain BRM88_00995 IPR004482 Mg chelatase-related protein BRM88_00995 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BRM88_00995 IPR020568 Ribosomal protein S5 domain 2-type fold BRM88_00995 IPR025158 Mg chelatase-related protein, C-terminal domain BRM88_00995 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_01000 IPR007475 Membrane fusogenic activity BRM88_01005 IPR002187 Nitrogen regulatory protein PII BRM88_01005 IPR002332 Nitrogen regulatory protein P-II, urydylation site BRM88_01005 IPR011322 Nitrogen regulatory PII-like, alpha/beta BRM88_01005 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BRM88_01015 IPR011496 Beta-N-acetylglucosaminidase BRM88_01015 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal BRM88_01015 IPR017853 Glycoside hydrolase, superfamily BRM88_01015 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like BRM88_01030 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel BRM88_01030 IPR027385 Outer membrane protein beta-barrel BRM88_01035 IPR018649 Domain of unknown function DUF2078 BRM88_01035 IPR039519 BRM88_01035 BRM88_01040 IPR001045 Spermidine/spermine synthases family BRM88_01040 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_01040 IPR030373 BRM88_01040 BRM88_01040 IPR035246 BRM88_01040 BRM88_01040 IPR037163 BRM88_01040 BRM88_01045 IPR000183 Ornithine/DAP/Arg decarboxylase BRM88_01045 IPR002985 Arginine decarboxylase BRM88_01045 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal BRM88_01045 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal BRM88_01045 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site BRM88_01045 IPR029066 PLP-binding barrel BRM88_01050 IPR002559 Transposase, IS4-like BRM88_01050 IPR008490 Transposase InsH, N-terminal BRM88_01065 IPR021692 Protein of unknown function DUF3274 BRM88_01065 IPR029058 Alpha/Beta hydrolase fold BRM88_01070 IPR021531 Protein of unknown function DUF2875 BRM88_01075 IPR008727 PAAR motif BRM88_01080 IPR021692 Protein of unknown function DUF3274 BRM88_01080 IPR029058 Alpha/Beta hydrolase fold BRM88_01085 IPR021531 Protein of unknown function DUF2875 BRM88_01100 IPR002218 Glucose-inhibited division protein A-related BRM88_01100 IPR004416 Glucose-inhibited division protein A BRM88_01100 IPR020595 Glucose-inhibited division protein A-related, conserved site BRM88_01100 IPR026904 GidA associated domain 3 BRM88_01100 IPR036188 BRM88_01100 BRM88_01115 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site BRM88_01115 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BRM88_01115 IPR036052 BRM88_01115 BRM88_01120 IPR003848 Domain of unknown function DUF218 BRM88_01120 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_01125 IPR011721 Conserved hypothetical protein CHP02096 BRM88_01125 IPR032710 BRM88_01125 BRM88_01125 IPR037401 BRM88_01125 BRM88_01130 IPR007803 Arginine/Asparagine/Proline hydroxylase BRM88_01130 IPR027443 Isopenicillin N synthase-like BRM88_01135 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC BRM88_01135 IPR013216 Methyltransferase type 11 BRM88_01135 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_01140 IPR002347 Glucose/ribitol dehydrogenase BRM88_01140 IPR036291 BRM88_01140 BRM88_01145 IPR000073 Alpha/beta hydrolase fold-1 BRM88_01145 IPR010076 Pimelyl-[acyl-carrier protein] methyl ester esterase BRM88_01145 IPR029058 Alpha/Beta hydrolase fold BRM88_01160 IPR025488 Protein of unknown function DUF4380 BRM88_01165 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal BRM88_01165 IPR011013 Galactose mutarotase-like domain BRM88_01165 IPR013783 Immunoglobulin-like fold BRM88_01165 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D BRM88_01165 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup BRM88_01165 IPR014756 Immunoglobulin E-set BRM88_01165 IPR023724 Glucan biosynthesis, MdoD BRM88_01170 IPR003018 GAF domain BRM88_01170 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_01170 IPR029016 GAF domain-like BRM88_01170 IPR036097 BRM88_01170 BRM88_01170 IPR036890 BRM88_01170 BRM88_01175 IPR001267 Thymidine kinase BRM88_01175 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_01180 IPR005752 DNA helicase, ATP-dependent, RepA type BRM88_01180 IPR013986 DExx box DNA helicase domain BRM88_01180 IPR014017 DNA helicase, UvrD-like, C-terminal BRM88_01180 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_01180 IPR034739 BRM88_01180 BRM88_01195 IPR007432 Protein of unknown function DUF480 BRM88_01195 IPR036388 BRM88_01195 BRM88_01195 IPR036390 BRM88_01195 BRM88_01200 IPR005519 Acid phosphatase (Class B) BRM88_01200 IPR006423 5-nucleotidase lipoprotein e(P4) BRM88_01200 IPR023214 HAD-like domain BRM88_01200 IPR036412 BRM88_01200 BRM88_01205 IPR001754 Orotidine 5'-phosphate decarboxylase domain BRM88_01205 IPR011060 Ribulose-phosphate binding barrel BRM88_01205 IPR013785 Aldolase-type TIM barrel BRM88_01205 IPR014732 Orotidine 5'-phosphate decarboxylase BRM88_01205 IPR018089 Orotidine 5'-phosphate decarboxylase, active site BRM88_01210 IPR006905 Tryptophan halogenase BRM88_01210 IPR033856 BRM88_01210 BRM88_01210 IPR036188 BRM88_01210 BRM88_01215 IPR000531 TonB-dependent receptor, beta-barrel BRM88_01215 IPR013784 Carbohydrate-binding-like fold BRM88_01220 IPR000531 TonB-dependent receptor, beta-barrel BRM88_01220 IPR013784 Carbohydrate-binding-like fold BRM88_01225 IPR000843 Transcription regulator HTH, LacI BRM88_01225 IPR010982 Lambda repressor-like, DNA-binding domain BRM88_01225 IPR028082 Periplasmic binding protein-like I BRM88_01240 IPR002123 Phospholipid/glycerol acyltransferase BRM88_01240 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase BRM88_01240 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB BRM88_01250 IPR007420 Protein of unknown function DUF465 BRM88_01270 IPR013830 BRM88_01270 BRM88_01270 IPR036514 BRM88_01270 BRM88_01275 IPR011051 RmlC-like cupin domain BRM88_01275 IPR013096 Cupin 2, conserved barrel BRM88_01275 IPR014710 RmlC-like jelly roll fold BRM88_01280 IPR025402 Domain of unknown function DUF4375 BRM88_01285 IPR005960 Phenylalanine-4-hydroxylase, monomeric form BRM88_01285 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site BRM88_01285 IPR019774 Aromatic amino acid hydroxylase, C-terminal BRM88_01285 IPR036329 BRM88_01285 BRM88_01285 IPR036951 BRM88_01285 BRM88_01290 IPR000485 AsnC-type HTH domain BRM88_01290 IPR011008 Dimeric alpha-beta barrel BRM88_01290 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BRM88_01290 IPR019887 Transcription regulator AsnC-type, C-terminal BRM88_01290 IPR019888 Transcription regulator AsnC-type BRM88_01290 IPR036388 BRM88_01290 BRM88_01290 IPR036390 BRM88_01290 BRM88_01315 IPR000566 Lipocalin/cytosolic fatty-acid binding domain BRM88_01315 IPR002446 Lipocalin, bacterial BRM88_01315 IPR012674 Calycin BRM88_01315 IPR022271 Lipocalin, ApoD type BRM88_01340 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site BRM88_01340 IPR011032 GroES (chaperonin 10)-like BRM88_01340 IPR013149 Alcohol dehydrogenase, C-terminal BRM88_01340 IPR013154 Alcohol dehydrogenase GroES-like BRM88_01340 IPR020843 Polyketide synthase, enoylreductase BRM88_01340 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BRM88_01340 IPR036291 BRM88_01340 BRM88_01350 IPR001547 Glycoside hydrolase, family 5 BRM88_01350 IPR017853 Glycoside hydrolase, superfamily BRM88_01350 IPR018087 Glycoside hydrolase, family 5, conserved site BRM88_01360 IPR001547 Glycoside hydrolase, family 5 BRM88_01360 IPR017853 Glycoside hydrolase, superfamily BRM88_01360 IPR018087 Glycoside hydrolase, family 5, conserved site BRM88_01370 IPR001547 Glycoside hydrolase, family 5 BRM88_01370 IPR017853 Glycoside hydrolase, superfamily BRM88_01370 IPR018087 Glycoside hydrolase, family 5, conserved site BRM88_01380 IPR004027 SEC-C motif BRM88_01380 IPR023006 Uncharacterised protein family UPF0225 BRM88_01380 IPR032710 BRM88_01380 BRM88_01395 IPR002559 Transposase, IS4-like BRM88_01395 IPR008490 Transposase InsH, N-terminal BRM88_01400 IPR002477 Peptidoglycan binding-like BRM88_01400 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase BRM88_01400 IPR011013 Galactose mutarotase-like domain BRM88_01400 IPR011970 Lytic murein transglycosylase BRM88_01400 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup BRM88_01400 IPR023346 Lysozyme-like domain BRM88_01400 IPR031304 BRM88_01400 BRM88_01400 IPR036365 BRM88_01400 BRM88_01400 IPR036366 BRM88_01400 BRM88_01405 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG BRM88_01405 IPR011701 Major facilitator superfamily BRM88_01405 IPR036259 BRM88_01405 BRM88_01410 IPR016053 Haem oxygenase-like BRM88_01410 IPR016084 Haem oxygenase-like, multi-helical BRM88_01415 IPR000014 PAS domain BRM88_01415 IPR001294 Phytochrome BRM88_01415 IPR003018 GAF domain BRM88_01415 IPR013515 Phytochrome, central region BRM88_01415 IPR013654 PAS fold-2 BRM88_01415 IPR013656 PAS fold-4 BRM88_01415 IPR029016 GAF domain-like BRM88_01415 IPR035965 BRM88_01415 BRM88_01465 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase BRM88_01465 IPR010979 Ribosomal protein S13-like, H2TH BRM88_01465 IPR012319 DNA glycosylase/AP lyase, catalytic domain BRM88_01465 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding BRM88_01465 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site BRM88_01465 IPR020629 Formamidopyrimidine-DNA glycosylase BRM88_01465 IPR035937 BRM88_01465 BRM88_01475 IPR024442 Transposase, zinc-ribbon BRM88_01475 IPR024445 Transposase, ISXO2-like BRM88_01490 IPR007428 VacJ-like lipoprotein BRM88_01495 IPR002645 STAS domain BRM88_01495 IPR036513 BRM88_01495 BRM88_01500 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC BRM88_01505 IPR003399 Mammalian cell entry-related BRM88_01505 IPR030970 BRM88_01505 BRM88_01510 IPR003453 Permease domain BRM88_01510 IPR030802 BRM88_01510 BRM88_01515 IPR003439 ABC transporter-like BRM88_01515 IPR003593 AAA+ ATPase domain BRM88_01515 IPR017871 ABC transporter, conserved site BRM88_01515 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_01525 IPR000182 GNAT domain BRM88_01525 IPR016181 Acyl-CoA N-acyltransferase BRM88_01530 IPR024442 Transposase, zinc-ribbon BRM88_01530 IPR024445 Transposase, ISXO2-like BRM88_01540 IPR001584 Integrase, catalytic core BRM88_01540 IPR012337 Ribonuclease H-like domain BRM88_01540 IPR025246 Transposase IS30-like HTH domain BRM88_01540 IPR036397 BRM88_01540 BRM88_01555 IPR002559 Transposase, IS4-like BRM88_01555 IPR012337 Ribonuclease H-like domain BRM88_01565 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 BRM88_01565 IPR032877 BRM88_01565 BRM88_01580 IPR036441 BRM88_01580 BRM88_01590 IPR002372 Pyrrolo-quinoline quinone repeat BRM88_01590 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily BRM88_01590 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BRM88_01605 IPR006001 Carbohydrate kinase, thermoresistant glucokinase BRM88_01605 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_01610 IPR001927 Sodium:galactoside symporter BRM88_01610 IPR036259 BRM88_01610 BRM88_01615 IPR008928 Six-hairpin glycosidase-like BRM88_01615 IPR010383 Glycosyltransferase 36 BRM88_01615 IPR011013 Galactose mutarotase-like domain BRM88_01615 IPR012341 Six-hairpin glycosidase BRM88_01615 IPR033432 BRM88_01615 BRM88_01615 IPR037018 BRM88_01615 BRM88_01620 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like BRM88_01620 IPR031924 BRM88_01620 BRM88_01630 IPR000014 PAS domain BRM88_01630 IPR001789 Signal transduction response regulator, receiver domain BRM88_01630 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_01630 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_01630 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_01630 IPR011006 CheY-like superfamily BRM88_01630 IPR035965 BRM88_01630 BRM88_01630 IPR036097 BRM88_01630 BRM88_01630 IPR036890 BRM88_01630 BRM88_01635 IPR003810 Domain of unknown function DUF204 BRM88_01635 IPR022929 Putative manganese efflux pump MntP BRM88_01640 IPR005471 Transcription regulator IclR, N-terminal BRM88_01640 IPR014757 Transcription regulator IclR, C-terminal BRM88_01640 IPR029016 GAF domain-like BRM88_01640 IPR036388 BRM88_01640 BRM88_01640 IPR036390 BRM88_01640 BRM88_01645 IPR005275 L-fucose permease FucP BRM88_01645 IPR011701 Major facilitator superfamily BRM88_01645 IPR036259 BRM88_01645 BRM88_01650 IPR008000 Rhamnose mutarotase BRM88_01650 IPR011008 Dimeric alpha-beta barrel BRM88_01655 IPR008490 Transposase InsH, N-terminal BRM88_01665 IPR024442 Transposase, zinc-ribbon BRM88_01665 IPR024445 Transposase, ISXO2-like BRM88_01680 IPR001567 Peptidase M3A/M3B BRM88_01680 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 BRM88_01695 IPR002123 Phospholipid/glycerol acyltransferase BRM88_01700 IPR000352 Peptide chain release factor class I/class II BRM88_01705 IPR018637 Domain of unknown function DUF2059 BRM88_01710 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F BRM88_01710 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site BRM88_01710 IPR020103 Pseudouridine synthase, catalytic domain BRM88_01715 IPR011051 RmlC-like cupin domain BRM88_01715 IPR013096 Cupin 2, conserved barrel BRM88_01715 IPR014710 RmlC-like jelly roll fold BRM88_01720 IPR004147 UbiB domain BRM88_01720 IPR010232 Probable protein kinase UbiB BRM88_01720 IPR011009 Protein kinase-like domain BRM88_01725 IPR003033 SCP2 sterol-binding domain BRM88_01735 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site BRM88_01735 IPR005905 D-alanine--D-alanine ligase BRM88_01735 IPR011095 D-alanine--D-alanine ligase, C-terminal BRM88_01735 IPR011127 D-alanine--D-alanine ligase, N-terminal domain BRM88_01735 IPR013815 ATP-grasp fold, subdomain 1 BRM88_01735 IPR016185 Pre-ATP-grasp domain BRM88_01790 IPR024442 Transposase, zinc-ribbon BRM88_01790 IPR024445 Transposase, ISXO2-like BRM88_01800 IPR002559 Transposase, IS4-like BRM88_01800 IPR008490 Transposase InsH, N-terminal BRM88_01820 IPR003710 Ketopantoate reductase ApbA/PanE BRM88_01820 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like BRM88_01820 IPR013328 Dehydrogenase, multihelical BRM88_01820 IPR013332 Ketopantoate reductase, N-terminal domain BRM88_01820 IPR013752 Ketopantoate reductase, C-terminal domain BRM88_01820 IPR036291 BRM88_01820 BRM88_01825 IPR024524 Protein of unknown function DUF3800 BRM88_01830 IPR000412 ABC-2 transporter BRM88_01830 IPR013525 ABC-2 type transporter BRM88_01835 IPR003439 ABC transporter-like BRM88_01835 IPR003593 AAA+ ATPase domain BRM88_01835 IPR017871 ABC transporter, conserved site BRM88_01835 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_01840 IPR001221 Phenol hydroxylase reductase BRM88_01840 IPR001433 Oxidoreductase FAD/NAD(P)-binding BRM88_01840 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase BRM88_01840 IPR008333 Oxidoreductase, FAD-binding domain BRM88_01840 IPR017938 Riboflavin synthase-like beta-barrel BRM88_01840 IPR039261 BRM88_01840 BRM88_01845 IPR002524 Cation efflux protein BRM88_01845 IPR027469 Cation efflux protein transmembrane domain BRM88_01850 IPR003735 Metal-sensitive transcriptional repressor BRM88_01850 IPR038390 BRM88_01850 BRM88_01860 IPR001387 Cro/C1-type helix-turn-helix domain BRM88_01860 IPR010982 Lambda repressor-like, DNA-binding domain BRM88_01865 IPR002410 Peptidase S33 BRM88_01865 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal BRM88_01865 IPR029058 Alpha/Beta hydrolase fold BRM88_01870 IPR003439 ABC transporter-like BRM88_01870 IPR003593 AAA+ ATPase domain BRM88_01870 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_01875 IPR032688 BRM88_01875 BRM88_01880 IPR003538 Gram-negative bacterial TonB protein BRM88_01880 IPR006260 TonB, C-terminal BRM88_01880 IPR037682 BRM88_01880 BRM88_01885 IPR006905 Tryptophan halogenase BRM88_01885 IPR033856 BRM88_01885 BRM88_01885 IPR036188 BRM88_01885 BRM88_01890 IPR003347 JmjC domain BRM88_01895 IPR010836 SapC BRM88_01900 IPR000531 TonB-dependent receptor, beta-barrel BRM88_01900 IPR010104 Bacterial TonB-dependent receptor BRM88_01900 IPR012910 TonB-dependent receptor, plug BRM88_01900 IPR037066 BRM88_01900 BRM88_01910 IPR004045 Glutathione S-transferase, N-terminal BRM88_01910 IPR004046 Glutathione S-transferase, C-terminal BRM88_01910 IPR036249 BRM88_01910 BRM88_01910 IPR036282 BRM88_01910 BRM88_01920 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BRM88_01920 IPR002469 Peptidase S9B, dipeptidylpeptidase IV N-terminal BRM88_01920 IPR029058 Alpha/Beta hydrolase fold BRM88_01920 IPR038554 BRM88_01920 BRM88_01930 IPR010281 Protein of unknown function DUF885 BRM88_01945 IPR001731 Porphobilinogen synthase BRM88_01945 IPR013785 Aldolase-type TIM barrel BRM88_01945 IPR030656 BRM88_01945 BRM88_01960 IPR000847 Transcription regulator HTH, LysR BRM88_01960 IPR005119 LysR, substrate-binding BRM88_01960 IPR036388 BRM88_01960 BRM88_01960 IPR036390 BRM88_01960 BRM88_01965 IPR001604 DNA/RNA non-specific endonuclease BRM88_01965 IPR018524 DNA/RNA non-specific endonuclease, active site BRM88_01965 IPR020821 Extracellular Endonuclease, subunit A BRM88_01970 IPR001094 Flavodoxin BRM88_01970 IPR001433 Oxidoreductase FAD/NAD(P)-binding BRM88_01970 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase BRM88_01970 IPR005625 PepSY-associated TM helix BRM88_01970 IPR008254 Flavodoxin/nitric oxide synthase BRM88_01970 IPR017938 Riboflavin synthase-like beta-barrel BRM88_01970 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 BRM88_01970 IPR029039 Flavoprotein-like BRM88_01970 IPR039261 BRM88_01970 BRM88_01980 IPR011042 Six-bladed beta-propeller, TolB-like BRM88_01980 IPR011659 WD40-like Beta Propeller BRM88_01985 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase BRM88_01985 IPR011342 Shikimate dehydrogenase BRM88_01985 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal BRM88_01985 IPR022893 Shikimate, quinate/shikimate dehydrogenase BRM88_01985 IPR036291 BRM88_01985 BRM88_01995 IPR006555 ATP-dependent helicase, C-terminal BRM88_01995 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_01995 IPR039000 BRM88_01995 BRM88_02005 IPR024442 Transposase, zinc-ribbon BRM88_02005 IPR024445 Transposase, ISXO2-like BRM88_02020 IPR002226 Catalase haem-binding site BRM88_02020 IPR010582 Catalase immune-responsive domain BRM88_02020 IPR011614 Catalase core domain BRM88_02020 IPR018028 Catalase, mono-functional, haem-containing BRM88_02020 IPR020835 Catalase-like domain BRM88_02020 IPR024708 Catalase active site BRM88_02020 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 BRM88_02020 IPR037060 BRM88_02020 BRM88_02025 IPR002110 Ankyrin repeat BRM88_02025 IPR020683 Ankyrin repeat-containing domain BRM88_02025 IPR036770 BRM88_02025 BRM88_02045 IPR001269 tRNA-dihydrouridine synthase BRM88_02045 IPR004653 tRNA-dihydrouridine synthase, TIM-barrel, YjbN BRM88_02045 IPR013785 Aldolase-type TIM barrel BRM88_02045 IPR018517 tRNA-dihydrouridine synthase, conserved site BRM88_02055 IPR001789 Signal transduction response regulator, receiver domain BRM88_02055 IPR001867 Signal transduction response regulator, C-terminal BRM88_02055 IPR011006 CheY-like superfamily BRM88_02055 IPR036388 BRM88_02055 BRM88_02060 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_02060 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_02060 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_02060 IPR036097 BRM88_02060 BRM88_02060 IPR036890 BRM88_02060 BRM88_02065 IPR014917 Protein of unknown function DUF1800 BRM88_02070 IPR010869 Protein of unknown function DUF1501 BRM88_02085 IPR003142 Biotin protein ligase, C-terminal BRM88_02085 IPR004143 Biotin/lipoate A/B protein ligase BRM88_02085 IPR004408 Biotin--acetyl-CoA-carboxylase ligase BRM88_02085 IPR008988 Transcriptional repressor, C-terminal BRM88_02085 IPR013196 Helix-turn-helix, type 11 BRM88_02085 IPR030855 BRM88_02085 BRM88_02085 IPR036388 BRM88_02085 BRM88_02085 IPR036390 BRM88_02085 BRM88_02090 IPR004619 Type III pantothenate kinase BRM88_02095 IPR007730 Sporulation-related domain BRM88_02095 IPR036680 BRM88_02095 BRM88_02105 IPR018094 Thymidylate kinase BRM88_02105 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_02105 IPR039430 BRM88_02105 BRM88_02120 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_02130 IPR006035 Ureohydrolase BRM88_02130 IPR014033 Arginase BRM88_02130 IPR020855 Ureohydrolase, manganese-binding site BRM88_02130 IPR023696 Ureohydrolase domain BRM88_02135 IPR012556 Entericidin EcnAB BRM88_02140 IPR012556 Entericidin EcnAB BRM88_02145 IPR008462 CsbD-like BRM88_02145 IPR026042 Stress response protein YjbJ BRM88_02145 IPR036629 BRM88_02145 BRM88_02150 IPR002305 Aminoacyl-tRNA synthetase, class Ic BRM88_02150 IPR002306 Tryptophan-tRNA ligase BRM88_02150 IPR010879 Domain of unknown function DUF1508 BRM88_02150 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_02150 IPR024109 Tryptophan-tRNA ligase, bacterial-type BRM88_02150 IPR036913 BRM88_02150 BRM88_02155 IPR001279 Beta-lactamase-like BRM88_02155 IPR036866 BRM88_02155 BRM88_02165 IPR003137 Protease-associated domain, PA BRM88_02165 IPR007484 Peptidase M28 BRM88_02185 IPR000620 Drug/metabolite transporter BRM88_02185 IPR004626 RarD protein BRM88_02190 IPR000073 Alpha/beta hydrolase fold-1 BRM88_02190 IPR029058 Alpha/Beta hydrolase fold BRM88_02200 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase BRM88_02200 IPR016174 Di-haem cytochrome, transmembrane BRM88_02205 IPR011614 Catalase core domain BRM88_02205 IPR020835 Catalase-like domain BRM88_02205 IPR024168 Catalase, SrpA-type, predicted BRM88_02210 IPR007627 RNA polymerase sigma-70 region 2 BRM88_02210 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BRM88_02210 IPR013324 RNA polymerase sigma factor, region 3/4 BRM88_02210 IPR013325 RNA polymerase sigma factor, region 2 BRM88_02210 IPR014284 RNA polymerase sigma-70 like domain BRM88_02210 IPR036388 BRM88_02210 BRM88_02220 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal BRM88_02220 IPR011356 Leucine aminopeptidase/peptidase B BRM88_02225 IPR006439 HAD hydrolase, subfamily IA BRM88_02225 IPR023214 HAD-like domain BRM88_02225 IPR036412 BRM88_02225 BRM88_02230 IPR002549 Uncharacterised protein family UPF0118 BRM88_02245 IPR000537 UbiA prenyltransferase family BRM88_02245 IPR006370 4-hydroxybenzoate polyprenyl transferase BRM88_02245 IPR030470 BRM88_02245 BRM88_02250 IPR000836 Phosphoribosyltransferase domain BRM88_02250 IPR029057 Phosphoribosyltransferase-like BRM88_02255 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB BRM88_02255 IPR006638 Elongator protein 3/MiaB/NifB BRM88_02255 IPR007197 Radical SAM BRM88_02255 IPR010722 Biotin and thiamin synthesis-associated domain BRM88_02255 IPR013785 Aldolase-type TIM barrel BRM88_02255 IPR024177 Biotin synthase BRM88_02260 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type BRM88_02260 IPR004839 Aminotransferase, class I/classII BRM88_02260 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BRM88_02260 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BRM88_02260 IPR015424 Pyridoxal phosphate-dependent transferase BRM88_02260 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria BRM88_02275 IPR002347 Glucose/ribitol dehydrogenase BRM88_02275 IPR036291 BRM88_02275 BRM88_02285 IPR002938 Monooxygenase, FAD-binding BRM88_02285 IPR036188 BRM88_02285 BRM88_02290 IPR001173 Glycosyltransferase 2-like BRM88_02290 IPR029044 Nucleotide-diphospho-sugar transferases BRM88_02295 IPR014030 Beta-ketoacyl synthase, N-terminal BRM88_02295 IPR016039 Thiolase-like BRM88_02300 IPR014030 Beta-ketoacyl synthase, N-terminal BRM88_02300 IPR014031 Beta-ketoacyl synthase, C-terminal BRM88_02300 IPR016039 Thiolase-like BRM88_02300 IPR018201 Beta-ketoacyl synthase, active site BRM88_02300 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BRM88_02305 IPR027354 YcgL domain BRM88_02305 IPR038068 BRM88_02305 BRM88_02310 IPR002110 Ankyrin repeat BRM88_02310 IPR020683 Ankyrin repeat-containing domain BRM88_02310 IPR036770 BRM88_02310 BRM88_02315 IPR016919 Uncharacterised conserved protein UCP029416, tyrosine-protein phosphatase, Mlr4629 BRM88_02315 IPR023485 Phosphotyrosine protein phosphatase I superfamily BRM88_02315 IPR036196 BRM88_02315 BRM88_02320 IPR008928 Six-hairpin glycosidase-like BRM88_02320 IPR011613 Glycoside hydrolase family 15 BRM88_02320 IPR012341 Six-hairpin glycosidase BRM88_02325 IPR008928 Six-hairpin glycosidase-like BRM88_02325 IPR011613 Glycoside hydrolase family 15 BRM88_02325 IPR012341 Six-hairpin glycosidase BRM88_02330 IPR001282 Glucose-6-phosphate dehydrogenase BRM88_02330 IPR019796 Glucose-6-phosphate dehydrogenase, active site BRM88_02330 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding BRM88_02330 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal BRM88_02330 IPR036291 BRM88_02330 BRM88_02335 IPR012337 Ribonuclease H-like domain BRM88_02335 IPR038721 BRM88_02335 BRM88_02345 IPR003148 Regulator of K+ conductance, N-terminal BRM88_02345 IPR004771 K+/H+ exchanger BRM88_02345 IPR006153 Cation/H+ exchanger BRM88_02345 IPR036291 BRM88_02345 BRM88_02345 IPR038770 BRM88_02345 BRM88_02350 IPR000644 CBS domain BRM88_02350 IPR006667 SLC41 divalent cation transporters, integral membrane domain BRM88_02350 IPR006668 Magnesium transporter, MgtE intracellular domain BRM88_02350 IPR006669 Magnesium transporter MgtE BRM88_02350 IPR036739 BRM88_02350 BRM88_02350 IPR038048 BRM88_02350 BRM88_02350 IPR038076 BRM88_02350 BRM88_02360 IPR000182 GNAT domain BRM88_02360 IPR003781 CoA-binding BRM88_02360 IPR013815 ATP-grasp fold, subdomain 1 BRM88_02360 IPR016102 Succinyl-CoA synthetase-like BRM88_02360 IPR016181 Acyl-CoA N-acyltransferase BRM88_02360 IPR032875 BRM88_02360 BRM88_02360 IPR036291 BRM88_02360 BRM88_02365 IPR007427 Protein of unknown function DUF475 BRM88_02370 IPR000788 Ribonucleotide reductase large subunit, C-terminal BRM88_02370 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal BRM88_02370 IPR013346 Ribonucleotide reductase, class I , alpha subunit BRM88_02370 IPR013509 Ribonucleotide reductase large subunit, N-terminal BRM88_02380 IPR000358 Ribonucleotide reductase small subunit BRM88_02380 IPR009078 Ferritin-like superfamily BRM88_02380 IPR012348 Ribonucleotide reductase-related BRM88_02385 IPR010359 Protein of unknown function DUF955 BRM88_02390 IPR010088 Ribonucleotide reductase-associated flavodoxin, putative BRM88_02390 IPR029039 Flavoprotein-like BRM88_02395 IPR013766 Thioredoxin domain BRM88_02395 IPR036249 BRM88_02395 BRM88_02410 IPR002155 Thiolase BRM88_02410 IPR012793 Beta-ketoadipyl CoA thiolase BRM88_02410 IPR016039 Thiolase-like BRM88_02410 IPR020610 Thiolase, active site BRM88_02410 IPR020613 Thiolase, conserved site BRM88_02410 IPR020615 Thiolase, acyl-enzyme intermediate active site BRM88_02410 IPR020616 Thiolase, N-terminal BRM88_02410 IPR020617 Thiolase, C-terminal BRM88_02415 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal BRM88_02415 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit BRM88_02415 IPR015889 Intradiol ring-cleavage dioxygenase, core BRM88_02415 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal BRM88_02420 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal BRM88_02420 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit BRM88_02420 IPR015889 Intradiol ring-cleavage dioxygenase, core BRM88_02430 IPR000362 Fumarate lyase family BRM88_02430 IPR008948 L-Aspartase-like BRM88_02430 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase BRM88_02430 IPR019468 Adenylosuccinate lyase C-terminal BRM88_02430 IPR022761 Fumarate lyase, N-terminal BRM88_02430 IPR024083 Fumarase/histidase, N-terminal BRM88_02435 IPR000073 Alpha/beta hydrolase fold-1 BRM88_02435 IPR026968 3-oxoadipate enol-lactonase 1/2 BRM88_02435 IPR029058 Alpha/Beta hydrolase fold BRM88_02440 IPR003779 Carboxymuconolactone decarboxylase-like BRM88_02440 IPR012788 4-carboxymuconolactone decarboxylase BRM88_02440 IPR029032 AhpD-like BRM88_02445 IPR022742 Putative lysophospholipase BRM88_02445 IPR029058 Alpha/Beta hydrolase fold BRM88_02455 IPR000687 RIO kinase BRM88_02455 IPR011009 Protein kinase-like domain BRM88_02455 IPR018935 RIO kinase, conserved site BRM88_02465 IPR002347 Glucose/ribitol dehydrogenase BRM88_02465 IPR020904 Short-chain dehydrogenase/reductase, conserved site BRM88_02465 IPR036291 BRM88_02465 BRM88_02475 IPR007730 Sporulation-related domain BRM88_02475 IPR036680 BRM88_02475 BRM88_02480 IPR001278 Arginine-tRNA ligase BRM88_02480 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BRM88_02480 IPR005148 Arginyl tRNA synthetase N-terminal domain BRM88_02480 IPR008909 DALR anticodon binding BRM88_02480 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding BRM88_02480 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_02480 IPR035684 BRM88_02480 BRM88_02480 IPR036695 BRM88_02480 BRM88_02485 IPR001405 RadC protein BRM88_02485 IPR010994 RuvA domain 2-like BRM88_02485 IPR020891 Uncharacterised protein family UPF0758, conserved site BRM88_02485 IPR025657 RadC-like JAB domain BRM88_02490 IPR003382 Flavoprotein BRM88_02490 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC BRM88_02490 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal BRM88_02490 IPR035929 BRM88_02490 BRM88_02490 IPR036551 BRM88_02490 BRM88_02495 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase BRM88_02495 IPR029054 dUTPase-like BRM88_02495 IPR036157 BRM88_02495 BRM88_02500 IPR005841 Alpha-D-phosphohexomutase superfamily BRM88_02500 IPR005843 Alpha-D-phosphohexomutase, C-terminal BRM88_02500 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I BRM88_02500 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II BRM88_02500 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III BRM88_02500 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III BRM88_02500 IPR036900 BRM88_02500 BRM88_02505 IPR036515 BRM88_02505 BRM88_02510 IPR011499 Lipid A biosynthesis BRM88_02510 IPR014546 Uncharacterised conserved protein, lipid A biosynthesis BRM88_02515 IPR001173 Glycosyltransferase 2-like BRM88_02515 IPR029044 Nucleotide-diphospho-sugar transferases BRM88_02520 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain BRM88_02520 IPR036291 BRM88_02520 BRM88_02525 IPR021725 Pathogenicity locus BRM88_02530 IPR003115 ParB/Sulfiredoxin BRM88_02530 IPR004437 ParB/RepB/Spo0J partition protein family BRM88_02530 IPR036086 BRM88_02530 BRM88_02535 IPR025669 AAA domain BRM88_02535 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_02545 IPR000836 Phosphoribosyltransferase domain BRM88_02545 IPR004467 Orotate phosphoribosyl transferase domain BRM88_02545 IPR023031 Orotate phosphoribosyltransferase BRM88_02545 IPR029057 Phosphoribosyltransferase-like BRM88_02550 IPR004808 AP endonuclease 1 BRM88_02550 IPR005135 Endonuclease/exonuclease/phosphatase BRM88_02550 IPR020847 AP endonuclease 1, binding site BRM88_02550 IPR036691 BRM88_02550 BRM88_02555 IPR011701 Major facilitator superfamily BRM88_02555 IPR036259 BRM88_02555 BRM88_02565 IPR005338 Anhydro-N-acetylmuramic acid kinase BRM88_02570 IPR007340 Opacity-associated protein A BRM88_02570 IPR011055 Duplicated hybrid motif BRM88_02570 IPR016047 Peptidase M23 BRM88_02575 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BRM88_02575 IPR002305 Aminoacyl-tRNA synthetase, class Ic BRM88_02575 IPR002307 Tyrosine-tRNA ligase BRM88_02575 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_02575 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 BRM88_02575 IPR036986 BRM88_02575 BRM88_02615 IPR001789 Signal transduction response regulator, receiver domain BRM88_02615 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_02615 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_02615 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_02615 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BRM88_02615 IPR011006 CheY-like superfamily BRM88_02615 IPR036097 BRM88_02615 BRM88_02615 IPR036641 BRM88_02615 BRM88_02615 IPR036890 BRM88_02615 BRM88_02620 IPR000160 GGDEF domain BRM88_02620 IPR001633 EAL domain BRM88_02620 IPR001789 Signal transduction response regulator, receiver domain BRM88_02620 IPR011006 CheY-like superfamily BRM88_02620 IPR029787 Nucleotide cyclase BRM88_02620 IPR035919 BRM88_02620 BRM88_02625 IPR025196 Domain of unknown function DUF4126 BRM88_02635 IPR007607 Protein of unknown function DUF583 BRM88_02640 IPR007607 Protein of unknown function DUF583 BRM88_02645 IPR000361 FeS cluster biogenesis BRM88_02645 IPR016092 FeS cluster insertion protein BRM88_02645 IPR017870 FeS cluster insertion, C-terminal, conserved site BRM88_02645 IPR023063 Iron-sulfur cluster insertion protein ErpA BRM88_02645 IPR035903 BRM88_02645 BRM88_02650 IPR005152 Lipase, secreted BRM88_02650 IPR029058 Alpha/Beta hydrolase fold BRM88_02655 IPR000086 NUDIX hydrolase domain BRM88_02655 IPR015375 NADH pyrophosphatase-like, N-terminal BRM88_02655 IPR015376 Zinc ribbon, NADH pyrophosphatase BRM88_02655 IPR015797 NUDIX hydrolase domain-like BRM88_02655 IPR020084 NUDIX hydrolase, conserved site BRM88_02660 IPR004485 Cobalamin biosynthesis CobD/CbiB BRM88_02670 IPR021215 Protein of unknown function DUF2752 BRM88_02675 IPR007593 CD225/Dispanin family BRM88_02685 IPR002123 Phospholipid/glycerol acyltransferase BRM88_02685 IPR011701 Major facilitator superfamily BRM88_02685 IPR036259 BRM88_02685 BRM88_02700 IPR010019 Integral membrane protein, YccS BRM88_02700 IPR010020 Integral membrane protein, YccS/YhfK BRM88_02700 IPR032692 BRM88_02700 BRM88_02705 IPR025455 Protein of unknown function DUF4276 BRM88_02710 IPR003959 ATPase, AAA-type, core BRM88_02710 IPR014555 RecF-like BRM88_02710 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_02715 IPR000115 Phosphoribosylglycinamide synthetase BRM88_02715 IPR011054 Rudiment single hybrid motif BRM88_02715 IPR013815 ATP-grasp fold, subdomain 1 BRM88_02715 IPR016185 Pre-ATP-grasp domain BRM88_02715 IPR020559 Phosphoribosylglycinamide synthetase, conserved site BRM88_02715 IPR020560 Phosphoribosylglycinamide synthetase, C-domain BRM88_02715 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BRM88_02715 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal BRM88_02715 IPR037123 BRM88_02715 BRM88_02720 IPR025455 Protein of unknown function DUF4276 BRM88_02725 IPR003959 ATPase, AAA-type, core BRM88_02725 IPR014555 RecF-like BRM88_02725 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_02730 IPR002695 AICARFT/IMPCHase bienzyme BRM88_02730 IPR011607 Methylglyoxal synthase-like domain BRM88_02730 IPR016193 Cytidine deaminase-like BRM88_02730 IPR024051 AICAR transformylase domain BRM88_02730 IPR036914 BRM88_02730 BRM88_02740 IPR022742 Putative lysophospholipase BRM88_02740 IPR029058 Alpha/Beta hydrolase fold BRM88_02750 IPR022744 Methyltransferase domain, putative BRM88_02750 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_02770 IPR002197 DNA binding HTH domain, Fis-type BRM88_02770 IPR005412 DNA-binding protein Fis BRM88_02770 IPR009057 Homeodomain-like BRM88_02775 IPR021834 Protein of unknown function DUF3426 BRM88_02785 IPR001387 Cro/C1-type helix-turn-helix domain BRM88_02785 IPR010982 Lambda repressor-like, DNA-binding domain BRM88_02800 IPR004498 Ribosomal protein L11 methyltransferase BRM88_02800 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_02830 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase BRM88_02830 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain BRM88_02830 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal BRM88_02830 IPR005482 Biotin carboxylase, C-terminal BRM88_02830 IPR011054 Rudiment single hybrid motif BRM88_02830 IPR013815 ATP-grasp fold, subdomain 1 BRM88_02830 IPR016185 Pre-ATP-grasp domain BRM88_02835 IPR012657 23S rRNA-intervening sequence protein BRM88_02835 IPR036583 BRM88_02835 BRM88_02840 IPR000089 Biotin/lipoyl attachment BRM88_02840 IPR001249 Acetyl-CoA biotin carboxyl carrier BRM88_02840 IPR001882 Biotin-binding site BRM88_02840 IPR011053 Single hybrid motif BRM88_02845 IPR001874 Dehydroquinase, class II BRM88_02845 IPR018509 Dehydroquinase, class II, conserved site BRM88_02845 IPR036441 BRM88_02845 BRM88_02860 IPR003834 Cytochrome c assembly protein, transmembrane domain BRM88_02860 IPR017937 Thioredoxin, conserved site BRM88_02860 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain BRM88_02860 IPR036249 BRM88_02860 BRM88_02860 IPR036929 BRM88_02860 BRM88_02865 IPR004323 Divalent ion tolerance protein, CutA BRM88_02865 IPR011322 Nitrogen regulatory PII-like, alpha/beta BRM88_02865 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BRM88_02870 IPR024442 Transposase, zinc-ribbon BRM88_02870 IPR024445 Transposase, ISXO2-like BRM88_02880 IPR012337 Ribonuclease H-like domain BRM88_02880 IPR038721 BRM88_02880 BRM88_02895 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal BRM88_02900 IPR001650 Helicase, C-terminal BRM88_02900 IPR005259 Primosomal protein n BRM88_02900 IPR011545 DEAD/DEAH box helicase domain BRM88_02900 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BRM88_02900 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_02910 IPR021455 Protein of unknown function DUF3106 BRM88_02925 IPR002528 Multi antimicrobial extrusion protein BRM88_02930 IPR002142 Peptidase S49 BRM88_02930 IPR004634 Peptidase S49, protease IV BRM88_02930 IPR004635 Peptidase S49, SppA BRM88_02930 IPR029045 ClpP/crotonase-like domain BRM88_02940 IPR002347 Glucose/ribitol dehydrogenase BRM88_02940 IPR020904 Short-chain dehydrogenase/reductase, conserved site BRM88_02940 IPR036291 BRM88_02940 BRM88_02955 IPR006070 YrdC-like domain BRM88_02955 IPR017945 DHBP synthase RibB-like alpha/beta domain BRM88_02955 IPR023535 Threonylcarbamoyl-AMP synthase BRM88_02960 IPR003601 DNA topoisomerase, type IA, domain 2 BRM88_02960 IPR003602 DNA topoisomerase, type IA, DNA-binding domain BRM88_02960 IPR005733 DNA topoisomerase I, bacterial-type BRM88_02960 IPR006171 Toprim domain BRM88_02960 IPR013497 DNA topoisomerase, type IA, central BRM88_02960 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 BRM88_02960 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 BRM88_02960 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 BRM88_02960 IPR023405 DNA topoisomerase, type IA, core domain BRM88_02960 IPR023406 DNA topoisomerase, type IA, active site BRM88_02960 IPR025589 Topoisomerase C-terminal repeat BRM88_02960 IPR028612 DNA topoisomerase I, type IA BRM88_02965 IPR010432 RDD BRM88_02965 IPR025640 Domain of unknown function DUF4339 BRM88_02965 IPR035445 BRM88_02965 BRM88_02975 IPR007456 Protein of unknown function DUF494 BRM88_02980 IPR003488 DNA recombination-mediator protein A BRM88_02980 IPR036388 BRM88_02980 BRM88_02985 IPR018392 LysM domain BRM88_02985 IPR036779 BRM88_02985 BRM88_02990 IPR023635 Peptide deformylase BRM88_02990 IPR036821 BRM88_02990 BRM88_02995 IPR001555 Phosphoribosylglycinamide formyltransferase, active site BRM88_02995 IPR002376 Formyl transferase, N-terminal BRM88_02995 IPR005793 Formyl transferase, C-terminal BRM88_02995 IPR005794 Methionyl-tRNA formyltransferase BRM88_02995 IPR011034 Formyl transferase, C-terminal-like BRM88_02995 IPR036477 BRM88_02995 BRM88_02995 IPR037022 BRM88_02995 BRM88_03000 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p BRM88_03000 IPR004573 rRNA small subunit methyltransferase B BRM88_03000 IPR006027 NusB/RsmB/TIM44 BRM88_03000 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site BRM88_03000 IPR023267 RNA (C5-cytosine) methyltransferase BRM88_03000 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_03000 IPR035926 BRM88_03000 BRM88_03005 IPR038731 BRM88_03005 BRM88_03010 IPR007016 O-antigen ligase-related BRM88_03015 IPR001173 Glycosyltransferase 2-like BRM88_03015 IPR029044 Nucleotide-diphospho-sugar transferases BRM88_03020 IPR003331 UDP-N-acetylglucosamine 2-epimerase BRM88_03020 IPR016886 Predicted glycerophosphotransferase UCP028458 BRM88_03025 IPR005182 Domain of unknown function DUF304 BRM88_03025 IPR014529 Uncharacterised conserved protein UCP026631 BRM88_03030 IPR005182 Domain of unknown function DUF304 BRM88_03030 IPR036259 BRM88_03030 BRM88_03035 IPR000926 GTP cyclohydrolase II, RibA BRM88_03035 IPR032677 BRM88_03035 BRM88_03035 IPR036144 BRM88_03035 BRM88_03040 IPR016181 Acyl-CoA N-acyltransferase BRM88_03050 IPR004960 Bacterial lipid A biosynthesis acyltransferase BRM88_03055 IPR003732 D-tyrosyl-tRNA(Tyr) deacylase BRM88_03055 IPR023509 D-Tyr tRNAtyr deacylase-like domain BRM88_03060 IPR000943 RNA polymerase sigma-70 BRM88_03060 IPR007127 RNA polymerase sigma factor 70, region 1.1 BRM88_03060 IPR007624 RNA polymerase sigma-70 region 3 BRM88_03060 IPR007627 RNA polymerase sigma-70 region 2 BRM88_03060 IPR007630 RNA polymerase sigma-70 region 4 BRM88_03060 IPR007631 RNA polymerase sigma factor 70, non-essential domain BRM88_03060 IPR009042 RNA polymerase sigma-70 region 1.2 BRM88_03060 IPR012760 RNA polymerase sigma factor RpoD, C-terminal BRM88_03060 IPR013324 RNA polymerase sigma factor, region 3/4 BRM88_03060 IPR013325 RNA polymerase sigma factor, region 2 BRM88_03060 IPR014284 RNA polymerase sigma-70 like domain BRM88_03060 IPR028630 RNA polymerase sigma factor RpoD BRM88_03060 IPR036388 BRM88_03060 BRM88_03075 IPR010998 Integrase, Lambda-type, N-terminal BRM88_03075 IPR011010 DNA breaking-rejoining enzyme, catalytic core BRM88_03075 IPR013762 Integrase-like, catalytic core BRM88_03115 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 BRM88_03115 IPR032877 BRM88_03115 BRM88_03130 IPR024442 Transposase, zinc-ribbon BRM88_03130 IPR024445 Transposase, ISXO2-like BRM88_03145 IPR003439 ABC transporter-like BRM88_03145 IPR003593 AAA+ ATPase domain BRM88_03145 IPR017871 ABC transporter, conserved site BRM88_03145 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_03150 IPR021913 Protein of unknown function DUF3526 BRM88_03150 IPR032688 BRM88_03150 BRM88_03155 IPR021913 Protein of unknown function DUF3526 BRM88_03160 IPR000531 TonB-dependent receptor, beta-barrel BRM88_03160 IPR010105 TonB-dependent siderophore receptor BRM88_03160 IPR012910 TonB-dependent receptor, plug BRM88_03160 IPR036942 BRM88_03160 BRM88_03160 IPR037066 BRM88_03160 BRM88_03165 IPR021549 Protein of unknown function DUF2894 BRM88_03170 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal BRM88_03170 IPR036737 BRM88_03170 BRM88_03175 IPR008520 Domain of unknown function DUF802 BRM88_03180 IPR021783 Protein of unknown function DUF3348 BRM88_03195 IPR005358 Putative zinc- or iron-chelating domain containing protein BRM88_03215 IPR003317 Cytochrome d ubiquinol oxidase, subunit II BRM88_03220 IPR002585 Cytochrome d ubiquinol oxidase, subunit I BRM88_03235 IPR001789 Signal transduction response regulator, receiver domain BRM88_03235 IPR002078 RNA polymerase sigma factor 54 interaction domain BRM88_03235 IPR002197 DNA binding HTH domain, Fis-type BRM88_03235 IPR003593 AAA+ ATPase domain BRM88_03235 IPR009057 Homeodomain-like BRM88_03235 IPR011006 CheY-like superfamily BRM88_03235 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BRM88_03235 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BRM88_03235 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_03245 IPR001789 Signal transduction response regulator, receiver domain BRM88_03245 IPR011006 CheY-like superfamily BRM88_03260 IPR006076 FAD dependent oxidoreductase BRM88_03260 IPR006181 D-amino acid oxidase, conserved site BRM88_03265 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_03265 IPR010559 Signal transduction histidine kinase, internal region BRM88_03265 IPR036890 BRM88_03265 BRM88_03280 IPR002293 Amino acid/polyamine transporter I BRM88_03295 IPR018713 Domain of unknown function DUF2236 BRM88_03300 IPR008753 Peptidase M13, N-terminal domain BRM88_03300 IPR018497 Peptidase M13, C-terminal domain BRM88_03300 IPR024079 Metallopeptidase, catalytic domain BRM88_03305 IPR001173 Glycosyltransferase 2-like BRM88_03305 IPR029044 Nucleotide-diphospho-sugar transferases BRM88_03315 IPR023210 NADP-dependent oxidoreductase domain BRM88_03315 IPR036812 BRM88_03315 BRM88_03320 IPR001226 Flavodoxin, conserved site BRM88_03320 IPR005025 NADPH-dependent FMN reductase-like BRM88_03320 IPR029039 Flavoprotein-like BRM88_03325 IPR032808 BRM88_03325 BRM88_03330 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B BRM88_03330 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type BRM88_03335 IPR006638 Elongator protein 3/MiaB/NifB BRM88_03335 IPR007197 Radical SAM BRM88_03335 IPR010994 RuvA domain 2-like BRM88_03335 IPR013785 Aldolase-type TIM barrel BRM88_03335 IPR023874 DNA modification/repair radical SAM protein, putative BRM88_03340 IPR005122 Uracil-DNA glycosylase-like BRM88_03340 IPR005273 Uracil-DNA glycosylase, family 4 domain BRM88_03340 IPR023875 DNA metabolism protein, putative BRM88_03340 IPR025404 Domain of unknown function DUF4130 BRM88_03340 IPR036895 BRM88_03340 BRM88_03350 IPR000782 FAS1 domain BRM88_03350 IPR036378 BRM88_03350 BRM88_03365 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria BRM88_03365 IPR004709 Na+/H+ exchanger BRM88_03365 IPR006153 Cation/H+ exchanger BRM88_03370 IPR003439 ABC transporter-like BRM88_03370 IPR003593 AAA+ ATPase domain BRM88_03370 IPR017871 ABC transporter, conserved site BRM88_03370 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_03375 IPR000412 ABC-2 transporter BRM88_03375 IPR013525 ABC-2 type transporter BRM88_03380 IPR021724 Protein of unknown function DUF3297 BRM88_03390 IPR000209 Peptidase S8/S53 domain BRM88_03390 IPR007280 Peptidase, C-terminal, archaeal/bacterial BRM88_03390 IPR015500 Peptidase S8, subtilisin-related BRM88_03390 IPR023827 Peptidase S8, subtilisin, Asp-active site BRM88_03390 IPR023828 Peptidase S8, subtilisin, Ser-active site BRM88_03390 IPR036852 BRM88_03390 BRM88_03395 IPR005594 YadA-like, C-terminal BRM88_03395 IPR008635 Coiled stalk of trimeric autotransporter adhesin BRM88_03395 IPR008640 Head domain of trimeric autotransporter adhesin BRM88_03395 IPR011049 Serralysin-like metalloprotease, C-terminal BRM88_03400 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_03400 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_03400 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_03400 IPR036097 BRM88_03400 BRM88_03400 IPR036890 BRM88_03400 BRM88_03405 IPR001789 Signal transduction response regulator, receiver domain BRM88_03405 IPR001867 Signal transduction response regulator, C-terminal BRM88_03405 IPR011006 CheY-like superfamily BRM88_03405 IPR016032 Signal transduction response regulator, C-terminal effector BRM88_03405 IPR036388 BRM88_03405 BRM88_03410 IPR025109 Domain of unknown function DUF4031 BRM88_03425 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal BRM88_03425 IPR025713 Motility protein B, N-terminal domain BRM88_03425 IPR036737 BRM88_03425 BRM88_03430 IPR000540 Flagellar motor protein MotA, conserved site BRM88_03430 IPR002898 MotA/TolQ/ExbB proton channel BRM88_03430 IPR022522 Flagellar motor stator, MotA BRM88_03435 IPR018660 C-type lysozyme, inhibitor BRM88_03435 IPR036328 BRM88_03435 BRM88_03440 IPR002579 Peptide methionine sulphoxide reductase MrsB BRM88_03440 IPR011057 Mss4-like BRM88_03450 IPR000485 AsnC-type HTH domain BRM88_03450 IPR011008 Dimeric alpha-beta barrel BRM88_03450 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BRM88_03450 IPR019887 Transcription regulator AsnC-type, C-terminal BRM88_03450 IPR019888 Transcription regulator AsnC-type BRM88_03450 IPR036388 BRM88_03450 BRM88_03450 IPR036390 BRM88_03450 BRM88_03455 IPR006076 FAD dependent oxidoreductase BRM88_03455 IPR023080 D-amino acid dehydrogenase small subunit, DadA BRM88_03455 IPR036188 BRM88_03455 BRM88_03460 IPR000821 Alanine racemase BRM88_03460 IPR001608 Alanine racemase, N-terminal BRM88_03460 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal BRM88_03460 IPR011079 Alanine racemase, C-terminal BRM88_03460 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site BRM88_03460 IPR029066 PLP-binding barrel BRM88_03465 IPR021557 Protein of unknown function DUF3016 BRM88_03480 IPR000014 PAS domain BRM88_03480 IPR001610 PAC motif BRM88_03480 IPR001789 Signal transduction response regulator, receiver domain BRM88_03480 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_03480 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_03480 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_03480 IPR011006 CheY-like superfamily BRM88_03480 IPR013656 PAS fold-4 BRM88_03480 IPR035965 BRM88_03480 BRM88_03480 IPR036097 BRM88_03480 BRM88_03480 IPR036890 BRM88_03480 BRM88_03490 IPR021649 Protein of unknown function DUF3247 BRM88_03495 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase BRM88_03495 IPR011042 Six-bladed beta-propeller, TolB-like BRM88_03495 IPR012938 Glucose/Sorbosone dehydrogenase BRM88_03515 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BRM88_03515 IPR007848 Methyltransferase small domain BRM88_03515 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_03520 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BRM88_03520 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F BRM88_03520 IPR020103 Pseudouridine synthase, catalytic domain BRM88_03520 IPR036986 BRM88_03520 BRM88_03525 IPR006439 HAD hydrolase, subfamily IA BRM88_03525 IPR023198 Phosphoglycolate phosphatase, domain 2 BRM88_03525 IPR023214 HAD-like domain BRM88_03525 IPR036412 BRM88_03525 BRM88_03530 IPR002347 Glucose/ribitol dehydrogenase BRM88_03530 IPR020904 Short-chain dehydrogenase/reductase, conserved site BRM88_03530 IPR036291 BRM88_03530 BRM88_03535 IPR009858 Protein of unknown function DUF1415 BRM88_03540 IPR029058 Alpha/Beta hydrolase fold BRM88_03555 IPR007551 Protein of unknown function DUF520 BRM88_03555 IPR035570 BRM88_03555 BRM88_03555 IPR035571 BRM88_03555 BRM88_03555 IPR036183 BRM88_03555 BRM88_03560 IPR000620 Drug/metabolite transporter BRM88_03565 IPR003439 ABC transporter-like BRM88_03565 IPR003593 AAA+ ATPase domain BRM88_03565 IPR017871 ABC transporter, conserved site BRM88_03565 IPR018449 NIL domain BRM88_03565 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_03570 IPR000515 MetI-like domain BRM88_03570 IPR035906 BRM88_03570 BRM88_03575 IPR004872 Lipoprotein NlpA family BRM88_03580 IPR009916 Protein of unknown function DUF1453 BRM88_03585 IPR005618 Outer membrane protein, OmpW BRM88_03585 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel BRM88_03590 IPR005122 Uracil-DNA glycosylase-like BRM88_03590 IPR026353 Hypoxanthine-DNA glycosylase BRM88_03590 IPR036895 BRM88_03590 BRM88_03595 IPR021307 Protein of unknown function DUF2884 BRM88_03600 IPR000089 Biotin/lipoyl attachment BRM88_03600 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain BRM88_03600 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site BRM88_03600 IPR004167 E3 binding BRM88_03600 IPR011053 Single hybrid motif BRM88_03600 IPR023213 Chloramphenicol acetyltransferase-like domain BRM88_03600 IPR036625 BRM88_03600 BRM88_03610 IPR000089 Biotin/lipoyl attachment BRM88_03610 IPR001100 BRM88_03610 BRM88_03610 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site BRM88_03610 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BRM88_03610 IPR006258 Dihydrolipoamide dehydrogenase BRM88_03610 IPR011053 Single hybrid motif BRM88_03610 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site BRM88_03610 IPR016156 FAD/NAD-linked reductase, dimerisation domain BRM88_03610 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain BRM88_03610 IPR036188 BRM88_03610 BRM88_03630 IPR000568 ATPase, F0 complex, subunit A BRM88_03630 IPR023011 ATPase, F0 complex, subunit A, active site BRM88_03630 IPR035908 BRM88_03630 BRM88_03635 IPR000454 ATPase, F0 complex, subunit C BRM88_03635 IPR002379 V-ATPase proteolipid subunit C-like domain BRM88_03635 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast BRM88_03635 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site BRM88_03635 IPR035921 BRM88_03635 BRM88_03635 IPR038662 BRM88_03635 BRM88_03640 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast BRM88_03640 IPR005864 ATPase, F0 complex, subunit B, bacterial BRM88_03640 IPR028987 F-type ATP synthase subunit B-like, membrane domain BRM88_03645 IPR000711 ATPase, OSCP/delta subunit BRM88_03645 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain BRM88_03650 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BRM88_03650 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal BRM88_03650 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain BRM88_03650 IPR005294 ATPase, F1 complex, alpha subunit BRM88_03650 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site BRM88_03650 IPR023366 ATP synthase subunit alpha-like domain BRM88_03650 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_03650 IPR036121 BRM88_03650 BRM88_03650 IPR038376 BRM88_03650 BRM88_03655 IPR000131 ATPase, F1 complex, gamma subunit BRM88_03655 IPR023632 ATPase, F1 complex, gamma subunit conserved site BRM88_03655 IPR035968 BRM88_03655 BRM88_03660 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BRM88_03660 IPR003593 AAA+ ATPase domain BRM88_03660 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain BRM88_03660 IPR005722 ATPase, F1 complex, beta subunit BRM88_03660 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site BRM88_03660 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal BRM88_03660 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_03660 IPR036121 BRM88_03660 BRM88_03665 IPR001469 ATPase, F1 complex, delta/epsilon subunit BRM88_03665 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal BRM88_03665 IPR036771 BRM88_03665 BRM88_03665 IPR036794 BRM88_03665 BRM88_03670 IPR002701 Chorismate mutase BRM88_03670 IPR008240 Chorismate mutase, periplasmic BRM88_03670 IPR036263 BRM88_03670 BRM88_03680 IPR007267 GtrA-like protein BRM88_03685 IPR001451 Bacterial transferase hexapeptide repeat BRM88_03685 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase BRM88_03685 IPR011004 Trimeric LpxA-like BRM88_03685 IPR025877 MobA-like NTP transferase domain BRM88_03685 IPR029044 Nucleotide-diphospho-sugar transferases BRM88_03700 IPR024442 Transposase, zinc-ribbon BRM88_03700 IPR024445 Transposase, ISXO2-like BRM88_03720 IPR006143 RND efflux pump, membrane fusion protein BRM88_03720 IPR032317 BRM88_03720 BRM88_03725 IPR001347 Sugar isomerase (SIS) BRM88_03725 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising BRM88_03725 IPR029055 Nucleophile aminohydrolases, N-terminal BRM88_03745 IPR009057 Homeodomain-like BRM88_03745 IPR025959 Winged helix-turn helix domain BRM88_03745 IPR038717 BRM88_03745 BRM88_03755 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BRM88_03755 IPR004361 Glyoxalase I BRM88_03755 IPR018146 Glyoxalase I, conserved site BRM88_03755 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BRM88_03760 IPR007939 Copper resistance B precursor BRM88_03765 IPR001117 Multicopper oxidase, type 1 BRM88_03765 IPR002355 Multicopper oxidase, copper-binding site BRM88_03765 IPR006376 Copper-resistance protein CopA BRM88_03765 IPR008972 Cupredoxin BRM88_03765 IPR011706 Multicopper oxidase, type 2 BRM88_03765 IPR011707 Multicopper oxidase, type 3 BRM88_03765 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BRM88_03765 IPR033138 BRM88_03765 BRM88_03775 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BRM88_03775 IPR036052 BRM88_03775 BRM88_03780 IPR001567 Peptidase M3A/M3B BRM88_03780 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 BRM88_03790 IPR014030 Beta-ketoacyl synthase, N-terminal BRM88_03790 IPR014031 Beta-ketoacyl synthase, C-terminal BRM88_03790 IPR016039 Thiolase-like BRM88_03790 IPR018201 Beta-ketoacyl synthase, active site BRM88_03790 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BRM88_03795 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA BRM88_03795 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ BRM88_03795 IPR029069 HotDog domain BRM88_03805 IPR001126 DNA-repair protein, UmuC-like BRM88_03805 IPR017961 DNA polymerase, Y-family, little finger domain BRM88_03805 IPR022880 DNA polymerase IV BRM88_03805 IPR036775 BRM88_03805 BRM88_03810 IPR006346 2-phosphoglycolate phosphatase, prokaryotic BRM88_03810 IPR006439 HAD hydrolase, subfamily IA BRM88_03810 IPR023198 Phosphoglycolate phosphatase, domain 2 BRM88_03810 IPR023214 HAD-like domain BRM88_03810 IPR036412 BRM88_03810 BRM88_03810 IPR037512 BRM88_03810 BRM88_03815 IPR007077 TfoX, C-terminal BRM88_03820 IPR000614 Free Met sulfoxide reductase conserved site BRM88_03820 IPR003018 GAF domain BRM88_03820 IPR029016 GAF domain-like BRM88_03825 IPR004472 Dethiobiotin synthase BioD BRM88_03825 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_03830 IPR018968 Phasin BRM88_03835 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein BRM88_03835 IPR038418 BRM88_03835 BRM88_03845 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site BRM88_03845 IPR001650 Helicase, C-terminal BRM88_03845 IPR011545 DEAD/DEAH box helicase domain BRM88_03845 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BRM88_03845 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_03855 IPR011234 Fumarylacetoacetase, C-terminal-related BRM88_03855 IPR036663 BRM88_03855 BRM88_03860 IPR004045 Glutathione S-transferase, N-terminal BRM88_03860 IPR005955 Maleylacetoacetate isomerase BRM88_03860 IPR036249 BRM88_03860 BRM88_03860 IPR036282 BRM88_03860 BRM88_03865 IPR001482 Type II secretion system protein E BRM88_03865 IPR006321 Pilus retraction protein PilT BRM88_03865 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_03870 IPR025511 Domain of unknown function DUF4398 BRM88_03875 IPR036737 BRM88_03875 BRM88_03880 IPR007420 Protein of unknown function DUF465 BRM88_03885 IPR000644 CBS domain BRM88_03885 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site BRM88_03885 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BRM88_03885 IPR036052 BRM88_03885 BRM88_03890 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme BRM88_03890 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BRM88_03890 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BRM88_03890 IPR015424 Pyridoxal phosphate-dependent transferase BRM88_03895 IPR006342 Methyltransferase FkbM BRM88_03895 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_03900 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain BRM88_03900 IPR036291 BRM88_03900 BRM88_03905 IPR001296 Glycosyl transferase, family 1 BRM88_03915 IPR001173 Glycosyltransferase 2-like BRM88_03915 IPR029044 Nucleotide-diphospho-sugar transferases BRM88_03920 IPR002656 Acyltransferase 3 BRM88_03925 IPR012337 Ribonuclease H-like domain BRM88_03925 IPR038721 BRM88_03925 BRM88_03940 IPR001207 Transposase, mutator type BRM88_03950 IPR003439 ABC transporter-like BRM88_03950 IPR003593 AAA+ ATPase domain BRM88_03950 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_03950 IPR029439 Wzt, C-terminal BRM88_03955 IPR000412 ABC-2 transporter BRM88_03955 IPR013525 ABC-2 type transporter BRM88_03960 IPR001308 Electron transfer flavoprotein, alpha subunit BRM88_03960 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_03960 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal BRM88_03960 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal BRM88_03960 IPR018206 Electron transfer flavoprotein, alpha subunit, C-terminal, conserved site BRM88_03960 IPR029035 DHS-like NAD/FAD-binding domain BRM88_03965 IPR012255 Electron transfer flavoprotein, beta subunit BRM88_03965 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_03965 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal BRM88_03970 IPR005888 dTDP-glucose 4,6-dehydratase BRM88_03970 IPR016040 NAD(P)-binding domain BRM88_03970 IPR036291 BRM88_03970 BRM88_03975 IPR005835 Nucleotidyl transferase BRM88_03975 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form BRM88_03975 IPR029044 Nucleotide-diphospho-sugar transferases BRM88_03980 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related BRM88_03980 IPR011051 RmlC-like cupin domain BRM88_03980 IPR014710 RmlC-like jelly roll fold BRM88_03985 IPR005913 dTDP-4-dehydrorhamnose reductase BRM88_03985 IPR029903 BRM88_03985 BRM88_03985 IPR036291 BRM88_03985 BRM88_03990 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal BRM88_03990 IPR005835 Nucleotidyl transferase BRM88_03990 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase BRM88_03990 IPR011051 RmlC-like cupin domain BRM88_03990 IPR014710 RmlC-like jelly roll fold BRM88_03990 IPR029044 Nucleotide-diphospho-sugar transferases BRM88_03995 IPR005841 Alpha-D-phosphohexomutase superfamily BRM88_03995 IPR005843 Alpha-D-phosphohexomutase, C-terminal BRM88_03995 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I BRM88_03995 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II BRM88_03995 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III BRM88_03995 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III BRM88_03995 IPR016066 Alpha-D-phosphohexomutase, conserved site BRM88_03995 IPR036900 BRM88_03995 BRM88_04000 IPR004163 Coenzyme A transferase binding site BRM88_04000 IPR004165 Coenzyme A transferase family I BRM88_04000 IPR012792 3-oxoacid CoA-transferase, subunit A BRM88_04000 IPR037171 BRM88_04000 BRM88_04005 IPR004164 Coenzyme A transferase active site BRM88_04005 IPR004165 Coenzyme A transferase family I BRM88_04005 IPR012791 3-oxoacid CoA-transferase, subunit B BRM88_04005 IPR037171 BRM88_04005 BRM88_04010 IPR007739 Rhamnan synthesis F BRM88_04010 IPR032719 BRM88_04010 BRM88_04015 IPR036188 BRM88_04015 BRM88_04020 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like BRM88_04020 IPR037151 BRM88_04020 BRM88_04030 IPR005586 Protein of unknown function DUF330 BRM88_04035 IPR003399 Mammalian cell entry-related BRM88_04040 IPR003439 ABC transporter-like BRM88_04040 IPR003593 AAA+ ATPase domain BRM88_04040 IPR017871 ABC transporter, conserved site BRM88_04040 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_04045 IPR003453 Permease domain BRM88_04045 IPR030802 BRM88_04045 BRM88_04050 IPR010619 Domain of unknown function DUF1212 BRM88_04050 IPR024528 Domain of unknown function DUF3815 BRM88_04055 IPR001801 Histone-like protein H-NS BRM88_04055 IPR027444 Histone-like protein H-NS, C-terminal domain BRM88_04055 IPR037150 BRM88_04055 BRM88_04060 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain BRM88_04060 IPR002316 Proline-tRNA ligase, class IIa BRM88_04060 IPR004154 Anticodon-binding BRM88_04060 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type BRM88_04060 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain BRM88_04060 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 BRM88_04060 IPR036621 BRM88_04060 BRM88_04060 IPR036754 BRM88_04060 BRM88_04065 IPR025392 Domain of unknown function DUF4124 BRM88_04070 IPR000462 CDP-alcohol phosphatidyltransferase BRM88_04070 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase BRM88_04075 IPR036654 BRM88_04075 BRM88_04080 IPR000182 GNAT domain BRM88_04080 IPR006464 Ribosomal-protein-alanine acetyltransferase BRM88_04080 IPR016181 Acyl-CoA N-acyltransferase BRM88_04085 IPR012337 Ribonuclease H-like domain BRM88_04085 IPR038721 BRM88_04085 BRM88_04095 IPR012337 Ribonuclease H-like domain BRM88_04095 IPR038721 BRM88_04095 BRM88_04100 IPR002559 Transposase, IS4-like BRM88_04100 IPR008490 Transposase InsH, N-terminal BRM88_04110 IPR012337 Ribonuclease H-like domain BRM88_04110 IPR038721 BRM88_04110 BRM88_04115 IPR008258 Lytic transglycosylase-like SLT domain BRM88_04115 IPR008939 Lytic transglycosylase, superhelical U-shaped BRM88_04115 IPR012289 Lytic transglycosylase, superhelical linker BRM88_04115 IPR023346 Lysozyme-like domain BRM88_04120 IPR002022 Pectate lyase/Amb allergen BRM88_04120 IPR011050 Pectin lyase fold/virulence factor BRM88_04120 IPR012334 Pectin lyase fold BRM88_04150 IPR013216 Methyltransferase type 11 BRM88_04150 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_04170 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BRM88_04170 IPR002300 Aminoacyl-tRNA synthetase, class Ia BRM88_04170 IPR002303 Valine-tRNA ligase BRM88_04170 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain BRM88_04170 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding BRM88_04170 IPR010978 tRNA-binding arm BRM88_04170 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding BRM88_04170 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_04170 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm BRM88_04170 IPR037118 BRM88_04170 BRM88_04175 IPR007459 DNA polymerase III chi subunit, HolC BRM88_04175 IPR036768 BRM88_04175 BRM88_04185 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal BRM88_04185 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal BRM88_04185 IPR011356 Leucine aminopeptidase/peptidase B BRM88_04185 IPR023042 Peptidase M17, leucine aminopeptidase BRM88_04190 IPR005495 Permease YjgP/YjgQ, predicted BRM88_04190 IPR030922 BRM88_04190 BRM88_04195 IPR005495 Permease YjgP/YjgQ, predicted BRM88_04195 IPR030923 BRM88_04195 BRM88_04205 IPR010432 RDD BRM88_04210 IPR002104 Integrase, catalytic BRM88_04210 IPR004107 Integrase, SAM-like, N-terminal BRM88_04210 IPR010998 Integrase, Lambda-type, N-terminal BRM88_04210 IPR011010 DNA breaking-rejoining enzyme, catalytic core BRM88_04210 IPR011932 Tyrosine recombinase XerD BRM88_04210 IPR013762 Integrase-like, catalytic core BRM88_04210 IPR023009 Tyrosine recombinase XerC/XerD BRM88_04215 IPR009094 Disulphide bond isomerase, DsbC, N-terminal BRM88_04215 IPR012336 Thioredoxin-like fold BRM88_04215 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal BRM88_04215 IPR036249 BRM88_04215 BRM88_04220 IPR010073 Phosphoribosylformylglycinamidine synthase BRM88_04220 IPR010918 AIR synthase-related protein, C-terminal domain BRM88_04220 IPR029062 Class I glutamine amidotransferase-like BRM88_04220 IPR036604 BRM88_04220 BRM88_04220 IPR036676 BRM88_04220 BRM88_04220 IPR036921 BRM88_04220 BRM88_04230 IPR005594 YadA-like, C-terminal BRM88_04230 IPR008635 Coiled stalk of trimeric autotransporter adhesin BRM88_04230 IPR008640 Head domain of trimeric autotransporter adhesin BRM88_04230 IPR011049 Serralysin-like metalloprotease, C-terminal BRM88_04230 IPR024973 ESPR domain BRM88_04240 IPR001584 Integrase, catalytic core BRM88_04240 IPR012337 Ribonuclease H-like domain BRM88_04240 IPR025246 Transposase IS30-like HTH domain BRM88_04250 IPR001482 Type II secretion system protein E BRM88_04250 IPR003593 AAA+ ATPase domain BRM88_04250 IPR007831 General secretory system II, protein E, N-terminal BRM88_04250 IPR013369 Type II secretion system GspE BRM88_04250 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_04250 IPR037257 BRM88_04250 BRM88_04260 IPR001992 Type II secretion system conserved site BRM88_04260 IPR003004 GspF/PilC family BRM88_04260 IPR018076 Type II secretion system F domain BRM88_04265 IPR000983 Bacterial general secretion pathway protein G-type pilin BRM88_04265 IPR010054 General secretion pathway protein G BRM88_04265 IPR012902 Prokaryotic N-terminal methylation site BRM88_04265 IPR013545 Type II secretion system protein G BRM88_04270 IPR002416 Type II secretion system protein H BRM88_04270 IPR022346 General secretion pathway, GspH BRM88_04275 IPR012902 Prokaryotic N-terminal methylation site BRM88_04280 IPR012902 Prokaryotic N-terminal methylation site BRM88_04285 IPR005628 General secretion pathway protein K BRM88_04285 IPR038072 BRM88_04285 BRM88_04290 IPR007813 Fimbrial assembly PilN BRM88_04295 IPR034756 BRM88_04295 BRM88_04305 IPR001775 GspD/PilQ family BRM88_04305 IPR004845 Type II secretion system GspD, conserved site BRM88_04305 IPR004846 Type II/III secretion system BRM88_04305 IPR005644 NolW-like BRM88_04305 IPR013356 Type II secretion system GspD BRM88_04305 IPR038591 BRM88_04305 BRM88_04310 IPR029044 Nucleotide-diphospho-sugar transferases BRM88_04320 IPR000524 Transcription regulator HTH, GntR BRM88_04320 IPR011663 UbiC transcription regulator-associated BRM88_04320 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain BRM88_04320 IPR036388 BRM88_04320 BRM88_04320 IPR036390 BRM88_04320 BRM88_04325 IPR006419 Nicotinamide mononucleotide transporter PnuC BRM88_04335 IPR000531 TonB-dependent receptor, beta-barrel BRM88_04335 IPR010105 TonB-dependent siderophore receptor BRM88_04335 IPR010917 TonB-dependent receptor, conserved site BRM88_04335 IPR012910 TonB-dependent receptor, plug BRM88_04335 IPR036942 BRM88_04335 BRM88_04335 IPR037066 BRM88_04335 BRM88_04340 IPR002575 Aminoglycoside phosphotransferase BRM88_04340 IPR011009 Protein kinase-like domain BRM88_04350 IPR001173 Glycosyltransferase 2-like BRM88_04350 IPR029044 Nucleotide-diphospho-sugar transferases BRM88_04375 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 BRM88_04375 IPR021127 CRISPR associated protein Cas2 BRM88_04380 IPR002729 CRISPR-associated protein Cas1 BRM88_04380 IPR019856 CRISPR-associated protein Cas1, DVULG subtype BRM88_04385 IPR011604 Exonuclease, phage-type/RecB, C-terminal BRM88_04385 IPR013343 CRISPR-associated protein Cas4 BRM88_04385 IPR022765 Dna2/Cas4, domain of unknown function DUF83 BRM88_04390 IPR006482 CRISPR-associated protein TM1801 BRM88_04390 IPR013418 CRISPR-associated protein Csd2 BRM88_04395 IPR010144 CRISPR-associated protein, Csd1-type BRM88_04400 IPR010155 CRISPR-associated protein, Cas5d-type BRM88_04400 IPR013422 CRISPR-associated protein Cas5, N-terminal BRM88_04400 IPR021124 CRISPR-associated protein, Cas5 BRM88_04405 IPR006474 Helicase Cas3, CRISPR-associated, core BRM88_04405 IPR006483 CRISPR-associated Cas3-HD domain BRM88_04405 IPR011545 DEAD/DEAH box helicase domain BRM88_04405 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BRM88_04405 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_04405 IPR038257 BRM88_04405 BRM88_04410 IPR024442 Transposase, zinc-ribbon BRM88_04410 IPR024445 Transposase, ISXO2-like BRM88_04420 IPR003697 Maf-like protein BRM88_04420 IPR029001 Inosine triphosphate pyrophosphatase-like BRM88_04425 IPR003772 Protein of unknown function DUF177 BRM88_04430 IPR002677 Ribosomal protein L32p BRM88_04430 IPR011332 Zinc-binding ribosomal protein BRM88_04435 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 BRM88_04435 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal BRM88_04435 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BRM88_04435 IPR016039 Thiolase-like BRM88_04440 IPR013978 MEKHLA BRM88_04440 IPR035965 BRM88_04440 BRM88_04445 IPR001227 Acyl transferase domain BRM88_04445 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type BRM88_04445 IPR014043 Acyl transferase BRM88_04445 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BRM88_04445 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding BRM88_04445 IPR020801 Polyketide synthase, acyl transferase domain BRM88_04445 IPR024925 Malonyl CoA-acyl carrier protein transacylase BRM88_04450 IPR002347 Glucose/ribitol dehydrogenase BRM88_04450 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase BRM88_04450 IPR020904 Short-chain dehydrogenase/reductase, conserved site BRM88_04450 IPR036291 BRM88_04450 BRM88_04455 IPR003231 Acyl carrier protein (ACP) BRM88_04455 IPR006162 Phosphopantetheine attachment site BRM88_04455 IPR009081 Acyl carrier protein-like BRM88_04455 IPR036736 BRM88_04455 BRM88_04460 IPR014030 Beta-ketoacyl synthase, N-terminal BRM88_04460 IPR014031 Beta-ketoacyl synthase, C-terminal BRM88_04460 IPR016039 Thiolase-like BRM88_04460 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 BRM88_04460 IPR018201 Beta-ketoacyl synthase, active site BRM88_04460 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BRM88_04465 IPR005801 ADC synthase BRM88_04465 IPR006805 Anthranilate synthase component I, N-terminal BRM88_04465 IPR010118 Para-aminobenzoate synthase/anthranilate synthase, component I BRM88_04465 IPR015890 Chorismate binding, C-terminal BRM88_04465 IPR019999 Anthranilate synthase component I - like BRM88_04470 IPR003770 Uncharacterised protein family UPF0755, YceG-like BRM88_04475 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_04480 IPR009875 PilZ domain BRM88_04505 IPR002078 RNA polymerase sigma factor 54 interaction domain BRM88_04505 IPR002197 DNA binding HTH domain, Fis-type BRM88_04505 IPR003593 AAA+ ATPase domain BRM88_04505 IPR009057 Homeodomain-like BRM88_04505 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal BRM88_04505 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR BRM88_04505 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BRM88_04505 IPR025944 Sigma-54 interaction domain, conserved site BRM88_04505 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_04510 IPR012695 Methylisocitrate lyase BRM88_04510 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain BRM88_04510 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site BRM88_04515 IPR002020 Citrate synthase-like BRM88_04515 IPR011278 2-methylcitrate synthase/citrate synthase type I BRM88_04515 IPR016142 Citrate synthase-like, large alpha subdomain BRM88_04515 IPR016143 Citrate synthase-like, small alpha subdomain BRM88_04515 IPR019810 Citrate synthase active site BRM88_04515 IPR024176 Citrate synthase, bacterial-type BRM88_04515 IPR036969 BRM88_04515 BRM88_04520 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel BRM88_04520 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha BRM88_04520 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent BRM88_04520 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BRM88_04520 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 BRM88_04520 IPR036008 BRM88_04520 BRM88_04535 IPR007400 PrpF protein BRM88_04535 IPR012709 PrpF, AcnD-accessory BRM88_04540 IPR002559 Transposase, IS4-like BRM88_04540 IPR008490 Transposase InsH, N-terminal BRM88_04545 IPR000531 TonB-dependent receptor, beta-barrel BRM88_04545 IPR012910 TonB-dependent receptor, plug BRM88_04545 IPR036942 BRM88_04545 BRM88_04550 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain BRM88_04550 IPR036452 BRM88_04550 BRM88_04565 IPR000531 TonB-dependent receptor, beta-barrel BRM88_04565 IPR010104 Bacterial TonB-dependent receptor BRM88_04565 IPR012910 TonB-dependent receptor, plug BRM88_04565 IPR037066 BRM88_04565 BRM88_04570 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain BRM88_04570 IPR030395 BRM88_04570 BRM88_04570 IPR032160 BRM88_04570 BRM88_04585 IPR012337 Ribonuclease H-like domain BRM88_04585 IPR038721 BRM88_04585 BRM88_04600 IPR001584 Integrase, catalytic core BRM88_04600 IPR012337 Ribonuclease H-like domain BRM88_04600 IPR036397 BRM88_04600 BRM88_04605 IPR008331 Ferritin/DPS protein domain BRM88_04605 IPR009078 Ferritin-like superfamily BRM88_04605 IPR012347 Ferritin-related BRM88_04605 IPR014490 Uncharacterised conserved protein UCP018063, ferritin fold BRM88_04610 IPR013740 Redoxin BRM88_04610 IPR036249 BRM88_04610 BRM88_04615 IPR002068 Alpha crystallin/Hsp20 domain BRM88_04615 IPR008978 HSP20-like chaperone BRM88_04620 IPR001623 DnaJ domain BRM88_04620 IPR002939 Chaperone DnaJ, C-terminal BRM88_04620 IPR008971 HSP40/DnaJ peptide-binding BRM88_04620 IPR018253 DnaJ domain, conserved site BRM88_04620 IPR036869 BRM88_04620 BRM88_04625 IPR001789 Signal transduction response regulator, receiver domain BRM88_04625 IPR011006 CheY-like superfamily BRM88_04630 IPR001107 Band 7 protein BRM88_04630 IPR001972 Stomatin family BRM88_04630 IPR010201 HflK BRM88_04630 IPR036013 BRM88_04630 BRM88_04635 IPR001107 Band 7 protein BRM88_04635 IPR010200 HflC BRM88_04635 IPR036013 BRM88_04635 BRM88_04640 IPR019201 Protein of unknown function DUF2065 BRM88_04645 IPR001114 Adenylosuccinate synthetase BRM88_04645 IPR018220 Adenylosuccinate synthase, active site BRM88_04645 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_04645 IPR033128 BRM88_04645 BRM88_04650 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal BRM88_04650 IPR024571 ERAP1-like C-terminal domain BRM88_04655 IPR014944 Toxin SymE-like BRM88_04655 IPR024442 Transposase, zinc-ribbon BRM88_04660 IPR002559 Transposase, IS4-like BRM88_04660 IPR008490 Transposase InsH, N-terminal BRM88_04680 IPR027783 Bacterial Pleckstrin homology domain-related BRM88_04685 IPR019401 Zinc finger, CHCC-type BRM88_04690 IPR001296 Glycosyl transferase, family 1 BRM88_04690 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain BRM88_04695 IPR007016 O-antigen ligase-related BRM88_04700 IPR004960 Bacterial lipid A biosynthesis acyltransferase BRM88_04700 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase BRM88_04705 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal BRM88_04705 IPR038107 BRM88_04705 BRM88_04710 IPR003423 Outer membrane efflux protein BRM88_04710 IPR010130 Type I secretion outer membrane protein, TolC BRM88_04715 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_04720 IPR001647 DNA-binding HTH domain, TetR-type BRM88_04720 IPR009057 Homeodomain-like BRM88_04720 IPR036271 BRM88_04720 BRM88_04720 IPR039536 BRM88_04720 BRM88_04725 IPR011110 Two component regulator propeller BRM88_04725 IPR015943 WD40/YVTN repeat-like-containing domain BRM88_04735 IPR000847 Transcription regulator HTH, LysR BRM88_04735 IPR005119 LysR, substrate-binding BRM88_04735 IPR036388 BRM88_04735 BRM88_04735 IPR036390 BRM88_04735 BRM88_04740 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha BRM88_04740 IPR004430 3-isopropylmalate dehydratase, large subunit BRM88_04740 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 BRM88_04740 IPR018136 Aconitase family, 4Fe-4S cluster binding site BRM88_04740 IPR036008 BRM88_04740 BRM88_04745 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel BRM88_04745 IPR004431 3-isopropylmalate dehydratase, small subunit BRM88_04745 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BRM88_04755 IPR004429 Isopropylmalate dehydrogenase BRM88_04755 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site BRM88_04755 IPR024084 Isopropylmalate dehydrogenase-like domain BRM88_04760 IPR000891 Pyruvate carboxyltransferase BRM88_04760 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site BRM88_04760 IPR005671 2-isopropylmalate synthase, bacterial-type BRM88_04760 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain BRM88_04760 IPR013785 Aldolase-type TIM barrel BRM88_04760 IPR036230 BRM88_04760 BRM88_04765 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BRM88_04765 IPR036052 BRM88_04765 BRM88_04775 IPR000399 TPP-binding enzyme, conserved site BRM88_04775 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BRM88_04775 IPR012000 Thiamine pyrophosphate enzyme, central domain BRM88_04775 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BRM88_04775 IPR012846 Acetolactate synthase, large subunit, biosynthetic BRM88_04775 IPR029035 DHS-like NAD/FAD-binding domain BRM88_04775 IPR029061 Thiamin diphosphate-binding fold BRM88_04780 IPR000506 Acetohydroxy acid isomeroreductase C-terminal BRM88_04780 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like BRM88_04780 IPR013023 Acetohydroxy acid isomeroreductase BRM88_04780 IPR013116 Acetohydroxy acid isomeroreductase, catalytic BRM88_04780 IPR014359 Ketol-acid reductoisomerase, gammaproteobacteria BRM88_04780 IPR036291 BRM88_04780 BRM88_04790 IPR002817 Thiamine biosynthesis protein ThiC BRM88_04790 IPR025747 ThiC-associated domain BRM88_04790 IPR037509 BRM88_04790 BRM88_04790 IPR038521 BRM88_04790 BRM88_04795 IPR001867 Signal transduction response regulator, C-terminal BRM88_04795 IPR011042 Six-bladed beta-propeller, TolB-like BRM88_04795 IPR011659 WD40-like Beta Propeller BRM88_04795 IPR016032 Signal transduction response regulator, C-terminal effector BRM88_04795 IPR036388 BRM88_04795 BRM88_04800 IPR009057 Homeodomain-like BRM88_04800 IPR018060 DNA binding HTH domain, AraC-type BRM88_04800 IPR018062 HTH domain AraC-type, conserved site BRM88_04805 IPR000531 TonB-dependent receptor, beta-barrel BRM88_04805 IPR012910 TonB-dependent receptor, plug BRM88_04805 IPR036942 BRM88_04805 BRM88_04805 IPR037066 BRM88_04805 BRM88_04815 IPR011006 CheY-like superfamily BRM88_04815 IPR013976 Metal-dependent hydrolase HDOD BRM88_04815 IPR014626 Signal transduction response regulator, modified HD-GYP domain-containing, putative BRM88_04820 IPR008162 Inorganic pyrophosphatase BRM88_04820 IPR036649 BRM88_04820 BRM88_04835 IPR024442 Transposase, zinc-ribbon BRM88_04835 IPR024445 Transposase, ISXO2-like BRM88_04840 IPR004131 Pyrophosphate-energised proton pump BRM88_04860 IPR000023 Phosphofructokinase domain BRM88_04860 IPR011404 Phosphofructokinase, XF0274 BRM88_04860 IPR022953 Phosphofructokinase BRM88_04860 IPR035966 BRM88_04860 BRM88_04865 IPR000850 Adenylate kinase/UMP-CMP kinase BRM88_04865 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_04865 IPR033690 BRM88_04865 BRM88_04870 IPR000713 Mur ligase, N-terminal BRM88_04870 IPR004101 Mur ligase, C-terminal BRM88_04870 IPR005757 Murein peptide ligase BRM88_04870 IPR013221 Mur ligase, central BRM88_04870 IPR036565 BRM88_04870 BRM88_04870 IPR036615 BRM88_04870 BRM88_04875 IPR003111 Peptidase S16, lon N-terminal BRM88_04875 IPR015947 PUA-like domain BRM88_04880 IPR021134 Bestrophin/UPF0187 BRM88_04900 IPR004045 Glutathione S-transferase, N-terminal BRM88_04900 IPR004046 Glutathione S-transferase, C-terminal BRM88_04900 IPR036249 BRM88_04900 BRM88_04900 IPR036282 BRM88_04900 BRM88_04905 IPR001236 Lactate/malate dehydrogenase, N-terminal BRM88_04905 IPR001557 L-lactate/malate dehydrogenase BRM88_04905 IPR010945 Malate dehydrogenase, type 2 BRM88_04905 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal BRM88_04905 IPR022383 Lactate/malate dehydrogenase, C-terminal BRM88_04905 IPR036291 BRM88_04905 BRM88_04910 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain BRM88_04910 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site BRM88_04910 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase BRM88_04910 IPR029000 Cyclophilin-like domain BRM88_04915 IPR000640 Translation elongation factor EFG, V domain BRM88_04915 IPR000795 Elongation factor, GTP-binding domain BRM88_04915 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 BRM88_04915 IPR005225 Small GTP-binding protein domain BRM88_04915 IPR006298 GTP-binding protein TypA BRM88_04915 IPR009000 Translation protein, beta-barrel domain BRM88_04915 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_04915 IPR031157 BRM88_04915 BRM88_04915 IPR035647 BRM88_04915 BRM88_04920 IPR021125 Protein of unknown function DUF2127 BRM88_04930 IPR006685 Mechanosensitive ion channel MscS BRM88_04930 IPR010920 Like-Sm (LSM) domain BRM88_04935 IPR002480 DAHP synthetase, class II BRM88_04940 IPR000531 TonB-dependent receptor, beta-barrel BRM88_04940 IPR012910 TonB-dependent receptor, plug BRM88_04940 IPR036942 BRM88_04940 BRM88_04940 IPR037066 BRM88_04940 BRM88_04945 IPR003752 Disulphide bond formation protein DsbB/BdbC BRM88_04945 IPR022920 Disulphide bond formation protein DsbB BRM88_04945 IPR023380 Disulphide bond formation protein DsbB-like domain BRM88_04965 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 BRM88_04965 IPR032877 BRM88_04965 BRM88_04975 IPR001254 Peptidase S1 BRM88_04975 IPR009003 Trypsin-like cysteine/serine peptidase domain BRM88_05010 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 BRM88_05010 IPR032877 BRM88_05010 BRM88_05020 IPR012337 Ribonuclease H-like domain BRM88_05020 IPR038721 BRM88_05020 BRM88_05040 IPR024442 Transposase, zinc-ribbon BRM88_05040 IPR024445 Transposase, ISXO2-like BRM88_05045 IPR011050 Pectin lyase fold/virulence factor BRM88_05070 IPR002559 Transposase, IS4-like BRM88_05070 IPR008490 Transposase InsH, N-terminal BRM88_05080 IPR011105 Cell wall hydrolase, SleB BRM88_05085 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain BRM88_05085 IPR032160 BRM88_05085 BRM88_05095 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain BRM88_05095 IPR030395 BRM88_05095 BRM88_05115 IPR024442 Transposase, zinc-ribbon BRM88_05115 IPR024445 Transposase, ISXO2-like BRM88_05120 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site BRM88_05120 IPR024084 Isopropylmalate dehydrogenase-like domain BRM88_05125 IPR010539 Bax inhibitor-1 BRM88_05175 IPR005215 Trigger factor BRM88_05175 IPR008880 Trigger factor, C-terminal domain BRM88_05175 IPR008881 Trigger factor, ribosome-binding, bacterial BRM88_05175 IPR027304 Trigger factor/SurA domain BRM88_05175 IPR036611 BRM88_05175 BRM88_05175 IPR037041 BRM88_05175 BRM88_05180 IPR001907 ATP-dependent Clp protease proteolytic subunit BRM88_05180 IPR018215 ClpP, active site BRM88_05180 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA BRM88_05180 IPR029045 ClpP/crotonase-like domain BRM88_05180 IPR033135 BRM88_05180 BRM88_05185 IPR003593 AAA+ ATPase domain BRM88_05185 IPR003959 ATPase, AAA-type, core BRM88_05185 IPR004487 Clp protease, ATP-binding subunit ClpX BRM88_05185 IPR010603 Zinc finger, ClpX C4-type BRM88_05185 IPR019489 Clp ATPase, C-terminal BRM88_05185 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_05185 IPR038366 BRM88_05185 BRM88_05190 IPR003111 Peptidase S16, lon N-terminal BRM88_05190 IPR003593 AAA+ ATPase domain BRM88_05190 IPR003959 ATPase, AAA-type, core BRM88_05190 IPR004815 Lon protease, bacterial/eukaryotic-type BRM88_05190 IPR008268 Peptidase S16, active site BRM88_05190 IPR008269 Peptidase S16, Lon C-terminal BRM88_05190 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BRM88_05190 IPR015947 PUA-like domain BRM88_05190 IPR020568 Ribosomal protein S5 domain 2-type fold BRM88_05190 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_05190 IPR027543 Lon protease, bacterial BRM88_05195 IPR000119 Histone-like bacterial DNA-binding protein BRM88_05195 IPR010992 Integration host factor (IHF)-like DNA-binding domain BRM88_05195 IPR020816 Histone-like DNA-binding protein, conserved site BRM88_05215 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site BRM88_05215 IPR027304 Trigger factor/SurA domain BRM88_05220 IPR008258 Lytic transglycosylase-like SLT domain BRM88_05220 IPR018392 LysM domain BRM88_05220 IPR023346 Lysozyme-like domain BRM88_05220 IPR036779 BRM88_05220 BRM88_05225 IPR001279 Beta-lactamase-like BRM88_05225 IPR017782 Hydroxyacylglutathione hydrolase BRM88_05225 IPR032282 BRM88_05225 BRM88_05225 IPR036866 BRM88_05225 BRM88_05230 IPR016885 Uncharacterised conserved protein UCP028445 BRM88_05230 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_05235 IPR002156 Ribonuclease H domain BRM88_05235 IPR012337 Ribonuclease H-like domain BRM88_05235 IPR022892 Ribonuclease H BRM88_05235 IPR036397 BRM88_05235 BRM88_05240 IPR006054 DNA polymerase III, epsilon subunit BRM88_05240 IPR006309 DNA polymerase 3, epsilon subunit BRM88_05240 IPR012337 Ribonuclease H-like domain BRM88_05240 IPR013520 Exonuclease, RNase T/DNA polymerase III BRM88_05240 IPR036397 BRM88_05240 BRM88_05250 IPR001932 Protein phosphatase 2C (PP2C)-like domain BRM88_05250 IPR036457 BRM88_05250 BRM88_05275 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein BRM88_05275 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset BRM88_05275 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal BRM88_05275 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain BRM88_05275 IPR037026 BRM88_05275 BRM88_05280 IPR021692 Protein of unknown function DUF3274 BRM88_05280 IPR029058 Alpha/Beta hydrolase fold BRM88_05285 IPR021531 Protein of unknown function DUF2875 BRM88_05295 IPR021692 Protein of unknown function DUF3274 BRM88_05295 IPR029058 Alpha/Beta hydrolase fold BRM88_05300 IPR021531 Protein of unknown function DUF2875 BRM88_05305 IPR008727 PAAR motif BRM88_05310 IPR021692 Protein of unknown function DUF3274 BRM88_05310 IPR029058 Alpha/Beta hydrolase fold BRM88_05315 IPR021531 Protein of unknown function DUF2875 BRM88_05320 IPR008727 PAAR motif BRM88_05330 IPR024442 Transposase, zinc-ribbon BRM88_05330 IPR024445 Transposase, ISXO2-like BRM88_05335 IPR002104 Integrase, catalytic BRM88_05335 IPR011010 DNA breaking-rejoining enzyme, catalytic core BRM88_05335 IPR013762 Integrase-like, catalytic core BRM88_05345 IPR002201 Glycosyl transferase, family 9 BRM88_05350 IPR011009 Protein kinase-like domain BRM88_05350 IPR022826 3-deoxy-D-manno-octulosonic acid kinase BRM88_05355 IPR001279 Beta-lactamase-like BRM88_05355 IPR036866 BRM88_05355 BRM88_05360 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site BRM88_05360 IPR006638 Elongator protein 3/MiaB/NifB BRM88_05360 IPR007197 Radical SAM BRM88_05360 IPR010505 Molybdenum cofactor synthesis C-terminal BRM88_05360 IPR013483 Molybdenum cofactor biosynthesis protein A BRM88_05360 IPR013785 Aldolase-type TIM barrel BRM88_05365 IPR027843 Domain of unknown function DUF4440 BRM88_05365 IPR032710 BRM88_05365 BRM88_05370 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain BRM88_05370 IPR023045 Molybdenum cofactor biosynthesis C BRM88_05370 IPR036522 BRM88_05370 BRM88_05375 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 BRM88_05375 IPR012675 Beta-grasp domain BRM88_05375 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BRM88_05380 IPR003448 Molybdopterin biosynthesis MoaE BRM88_05380 IPR036563 BRM88_05380 BRM88_05395 IPR001270 ClpA/B family BRM88_05395 IPR003593 AAA+ ATPase domain BRM88_05395 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal BRM88_05395 IPR012763 DNA polymerase III, subunit gamma/ tau BRM88_05395 IPR021029 DNA polymerase III, tau subunit, domain V BRM88_05395 IPR022754 DNA polymerase III, gamma subunit, domain III BRM88_05395 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_05395 IPR038249 BRM88_05395 BRM88_05400 IPR004401 Nucleoid-associated protein YbaB BRM88_05400 IPR036894 BRM88_05400 BRM88_05405 IPR000093 DNA recombination protein RecR BRM88_05405 IPR006171 Toprim domain BRM88_05405 IPR015967 Recombination protein RecR, conserved site BRM88_05405 IPR023627 Recombination protein RecR BRM88_05405 IPR023628 Recombination protein RecR, C4-type zinc finger BRM88_05410 IPR001310 Histidine triad (HIT) protein BRM88_05410 IPR019808 Histidine triad, conserved site BRM88_05410 IPR036265 BRM88_05410 BRM88_05415 IPR004658 Outer membrane lipoprotein Slp BRM88_05420 IPR002931 Transglutaminase-like BRM88_05420 IPR021878 Protein of unknown function DUF3488 BRM88_05420 IPR038765 BRM88_05420 BRM88_05425 IPR002881 Domain of unknown function DUF58 BRM88_05430 IPR003593 AAA+ ATPase domain BRM88_05430 IPR011703 ATPase, AAA-3 BRM88_05430 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_05435 IPR038731 BRM88_05435 BRM88_05450 IPR023635 Peptide deformylase BRM88_05450 IPR036821 BRM88_05450 BRM88_05470 IPR002594 Glycoside hydrolase, family 12 BRM88_05470 IPR013319 Glycoside hydrolase, family 11/12 BRM88_05470 IPR013320 Concanavalin A-like lectin/glucanase, subgroup BRM88_05480 IPR008979 Galactose-binding domain-like BRM88_05480 IPR011013 Galactose mutarotase-like domain BRM88_05480 IPR013784 Carbohydrate-binding-like fold BRM88_05480 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup BRM88_05480 IPR015364 Rhamnogalacturonase B, N-terminal BRM88_05480 IPR016590 Rhamnogalacturonase B BRM88_05480 IPR029411 Rhamnogalacturonan lyase, domain III BRM88_05480 IPR029413 Rhamnogalacturonan lyase, domain II BRM88_05490 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 BRM88_05490 IPR032877 BRM88_05490 BRM88_05500 IPR002559 Transposase, IS4-like BRM88_05500 IPR008490 Transposase InsH, N-terminal BRM88_05515 IPR029494 Domain of unknown function DUF4433 BRM88_05520 IPR012337 Ribonuclease H-like domain BRM88_05520 IPR038721 BRM88_05520 BRM88_05525 IPR029494 Domain of unknown function DUF4433 BRM88_05530 IPR001763 Rhodanese-like domain BRM88_05530 IPR002109 Glutaredoxin BRM88_05530 IPR004480 Monothiol glutaredoxin-related BRM88_05530 IPR035903 BRM88_05530 BRM88_05530 IPR036249 BRM88_05530 BRM88_05530 IPR036873 BRM88_05530 BRM88_05535 IPR002509 Polysaccharide deacetylase BRM88_05535 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BRM88_05545 IPR013217 Methyltransferase type 12 BRM88_05545 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_05550 IPR013830 BRM88_05550 BRM88_05550 IPR036514 BRM88_05550 BRM88_05555 IPR004839 Aminotransferase, class I/classII BRM88_05555 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BRM88_05555 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BRM88_05555 IPR015424 Pyridoxal phosphate-dependent transferase BRM88_05560 IPR004881 Ribosome biogenesis GTPase RsgA, putative BRM88_05560 IPR010914 EngC GTPase BRM88_05560 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_05565 IPR012548 Protein of unknown function DUF1704 BRM88_05565 IPR012656 Conserved hypothetical protein CHP02421, QEGLA BRM88_05570 IPR002818 ThiJ/PfpI BRM88_05570 IPR029062 Class I glutamine amidotransferase-like BRM88_05575 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BRM88_05575 IPR013780 Glycosyl hydrolase, family 13, all-beta BRM88_05575 IPR017853 Glycoside hydrolase, superfamily BRM88_05580 IPR000531 TonB-dependent receptor, beta-barrel BRM88_05580 IPR012910 TonB-dependent receptor, plug BRM88_05580 IPR036942 BRM88_05580 BRM88_05580 IPR037066 BRM88_05580 BRM88_05585 IPR011701 Major facilitator superfamily BRM88_05585 IPR036259 BRM88_05585 BRM88_05595 IPR000843 Transcription regulator HTH, LacI BRM88_05595 IPR010982 Lambda repressor-like, DNA-binding domain BRM88_05595 IPR028082 Periplasmic binding protein-like I BRM88_05600 IPR002347 Glucose/ribitol dehydrogenase BRM88_05600 IPR011283 Acetoacetyl-CoA reductase BRM88_05600 IPR036291 BRM88_05600 BRM88_05605 IPR004680 Citrate transporter-like domain BRM88_05605 IPR014738 Citrate transporter BRM88_05615 IPR010870 Phosphate-selective porin O/P BRM88_05615 IPR023614 Porin domain BRM88_05620 IPR001789 Signal transduction response regulator, receiver domain BRM88_05620 IPR001867 Signal transduction response regulator, C-terminal BRM88_05620 IPR011006 CheY-like superfamily BRM88_05620 IPR036388 BRM88_05620 BRM88_05625 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_05625 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_05625 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_05625 IPR013727 Two-component sensor kinase N-terminal BRM88_05625 IPR036097 BRM88_05625 BRM88_05625 IPR036890 BRM88_05625 BRM88_05635 IPR000792 Transcription regulator LuxR, C-terminal BRM88_05635 IPR001789 Signal transduction response regulator, receiver domain BRM88_05635 IPR011006 CheY-like superfamily BRM88_05635 IPR016032 Signal transduction response regulator, C-terminal effector BRM88_05640 IPR032710 BRM88_05640 BRM88_05640 IPR037401 BRM88_05640 BRM88_05645 IPR023210 NADP-dependent oxidoreductase domain BRM88_05645 IPR036812 BRM88_05645 BRM88_05655 IPR000847 Transcription regulator HTH, LysR BRM88_05655 IPR005119 LysR, substrate-binding BRM88_05655 IPR036388 BRM88_05655 BRM88_05655 IPR036390 BRM88_05655 BRM88_05665 IPR005828 General substrate transporter BRM88_05665 IPR005829 Sugar transporter, conserved site BRM88_05665 IPR036259 BRM88_05665 BRM88_05670 IPR001789 Signal transduction response regulator, receiver domain BRM88_05670 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_05670 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_05670 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_05670 IPR011006 CheY-like superfamily BRM88_05670 IPR029151 Periplasmic sensor domain-like BRM88_05670 IPR033479 BRM88_05670 BRM88_05670 IPR035965 BRM88_05670 BRM88_05670 IPR036097 BRM88_05670 BRM88_05670 IPR036890 BRM88_05670 BRM88_05680 IPR010870 Phosphate-selective porin O/P BRM88_05680 IPR023614 Porin domain BRM88_05685 IPR001991 Sodium:dicarboxylate symporter BRM88_05685 IPR018107 Sodium:dicarboxylate symporter, conserved site BRM88_05685 IPR023954 C4-dicarboxylate transport protein BRM88_05685 IPR036458 BRM88_05685 BRM88_05690 IPR002505 Phosphate acetyl/butaryl transferase BRM88_05690 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase BRM88_05690 IPR012301 Malic enzyme, N-terminal domain BRM88_05690 IPR012302 Malic enzyme, NAD-binding BRM88_05690 IPR036291 BRM88_05690 BRM88_05690 IPR037062 BRM88_05690 BRM88_05725 IPR013785 Aldolase-type TIM barrel BRM88_05725 IPR022998 Thiamin phosphate synthase superfamily BRM88_05725 IPR034291 BRM88_05725 BRM88_05725 IPR036206 BRM88_05725 BRM88_05730 IPR018527 Rubredoxin, iron-binding site BRM88_05730 IPR024922 Rubredoxin BRM88_05730 IPR024935 Rubredoxin domain BRM88_05735 IPR011990 Tetratricopeptide-like helical domain BRM88_05735 IPR032698 BRM88_05735 BRM88_05740 IPR003795 Protein of unknown function DUF192 BRM88_05740 IPR038695 BRM88_05740 BRM88_05745 IPR004788 Ribose 5-phosphate isomerase, type A BRM88_05745 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup BRM88_05745 IPR037171 BRM88_05745 BRM88_05750 IPR002740 EVE domain BRM88_05750 IPR015947 PUA-like domain BRM88_05755 IPR002698 5-formyltetrahydrofolate cyclo-ligase BRM88_05755 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain BRM88_05755 IPR037171 BRM88_05755 BRM88_05765 IPR007838 Cell division protein ZapA-like BRM88_05765 IPR036192 BRM88_05765 BRM88_05770 IPR012662 Conserved hypothetical protein CHP02449 BRM88_05775 IPR011978 Uncharacterised protein family UPF0149 BRM88_05775 IPR036255 BRM88_05775 BRM88_05780 IPR000994 Peptidase M24, structural domain BRM88_05780 IPR001714 Peptidase M24, methionine aminopeptidase BRM88_05780 IPR007865 Aminopeptidase P, N-terminal BRM88_05780 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BRM88_05780 IPR036005 BRM88_05780 BRM88_05800 IPR000994 Peptidase M24, structural domain BRM88_05800 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site BRM88_05800 IPR022846 Xaa-Pro dipeptidase BRM88_05800 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BRM88_05800 IPR036005 BRM88_05800 BRM88_05805 IPR009875 PilZ domain BRM88_05810 IPR012434 Protein of unknown function DUF1631 BRM88_05815 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related BRM88_05815 IPR006638 Elongator protein 3/MiaB/NifB BRM88_05815 IPR007197 Radical SAM BRM88_05815 IPR010723 HemN, C-terminal domain BRM88_05815 IPR023404 Radical SAM, alpha/beta horseshoe BRM88_05820 IPR002637 Ham1-like protein BRM88_05820 IPR020922 Non-canonical purine NTP pyrophosphatase BRM88_05820 IPR029001 Inosine triphosphate pyrophosphatase-like BRM88_05825 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BRM88_05825 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BRM88_05830 IPR001247 Exoribonuclease, phosphorolytic domain 1 BRM88_05830 IPR002381 Ribonuclease phosphorolytic, bacterial-type BRM88_05830 IPR015847 Exoribonuclease, phosphorolytic domain 2 BRM88_05830 IPR018336 Ribonuclease PH, conserved site BRM88_05830 IPR020568 Ribosomal protein S5 domain 2-type fold BRM88_05830 IPR027408 PNPase/RNase PH domain BRM88_05830 IPR036345 BRM88_05830 BRM88_05835 IPR005229 Conserved hypothetical protein CHP00255 BRM88_05835 IPR013527 YicC-like, N-terminal BRM88_05835 IPR013551 Domain of unknown function DUF1732 BRM88_05840 IPR008145 Guanylate kinase/L-type calcium channel beta subunit BRM88_05840 IPR017665 Guanylate kinase BRM88_05840 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_05855 IPR003716 DNA-directed RNA polymerase, omega subunit BRM88_05855 IPR006110 RNA polymerase, subunit omega/K/RPB6 BRM88_05855 IPR012293 RNA polymerase subunit, RPB6/omega BRM88_05855 IPR036161 BRM88_05855 BRM88_05860 IPR002912 ACT domain BRM88_05860 IPR003607 HD/PDEase domain BRM88_05860 IPR004095 TGS BRM88_05860 IPR004811 RelA/SpoT family BRM88_05860 IPR007685 RelA/SpoT BRM88_05860 IPR012675 Beta-grasp domain BRM88_05860 IPR012676 TGS-like BRM88_05865 IPR006056 Enamine/imine deaminase YjgF-like BRM88_05865 IPR006175 YjgF/Yer057p/UK114 family BRM88_05865 IPR035959 BRM88_05865 BRM88_05870 IPR001650 Helicase, C-terminal BRM88_05870 IPR004609 ATP-dependent DNA helicase RecG BRM88_05870 IPR011545 DEAD/DEAH box helicase domain BRM88_05870 IPR012340 Nucleic acid-binding, OB-fold BRM88_05870 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BRM88_05870 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_05870 IPR033454 BRM88_05870 BRM88_05875 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain BRM88_05875 IPR036452 BRM88_05875 BRM88_05880 IPR002150 Ribosomal protein L31 BRM88_05880 IPR027493 Ribosomal protein L31 type B BRM88_05880 IPR034704 BRM88_05880 BRM88_05885 IPR002020 Citrate synthase-like BRM88_05885 IPR010953 Citrate synthase, type I BRM88_05885 IPR016142 Citrate synthase-like, large alpha subdomain BRM88_05885 IPR016143 Citrate synthase-like, small alpha subdomain BRM88_05885 IPR019810 Citrate synthase active site BRM88_05885 IPR024176 Citrate synthase, bacterial-type BRM88_05885 IPR036969 BRM88_05885 BRM88_05895 IPR001264 Glycosyl transferase, family 51 BRM88_05895 IPR001460 Penicillin-binding protein, transpeptidase BRM88_05895 IPR012338 Beta-lactamase/transpeptidase-like BRM88_05895 IPR023346 Lysozyme-like domain BRM88_05895 IPR031376 BRM88_05895 BRM88_05895 IPR036950 BRM88_05895 BRM88_05900 IPR005883 Type IV pilus assembly protein PilM BRM88_05905 IPR007813 Fimbrial assembly PilN BRM88_05910 IPR007445 Pilus assembly protein, PilO BRM88_05910 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 BRM88_05915 IPR007446 Pilus assembly protein PilP BRM88_05920 IPR001775 GspD/PilQ family BRM88_05920 IPR004845 Type II secretion system GspD, conserved site BRM88_05920 IPR004846 Type II/III secretion system BRM88_05920 IPR005644 NolW-like BRM88_05920 IPR011662 Secretin/TonB, short N-terminal BRM88_05920 IPR013355 Type IV pilus secretin PilQ BRM88_05920 IPR038591 BRM88_05920 BRM88_05930 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 BRM88_05930 IPR032877 BRM88_05930 BRM88_05935 IPR009057 Homeodomain-like BRM88_05935 IPR025959 Winged helix-turn helix domain BRM88_05935 IPR038717 BRM88_05935 BRM88_05945 IPR003593 AAA+ ATPase domain BRM88_05945 IPR011703 ATPase, AAA-3 BRM88_05945 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_05950 IPR002881 Domain of unknown function DUF58 BRM88_05955 IPR025489 Protein of unknown function (DUF4381 BRM88_05960 IPR002035 von Willebrand factor, type A BRM88_05960 IPR036465 BRM88_05960 BRM88_05965 IPR001440 Tetratricopeptide TPR1 BRM88_05965 IPR002035 von Willebrand factor, type A BRM88_05965 IPR011990 Tetratricopeptide-like helical domain BRM88_05965 IPR019734 Tetratricopeptide repeat BRM88_05965 IPR036465 BRM88_05965 BRM88_05970 IPR025738 Aerotolerance-related protein BatD BRM88_05980 IPR020528 Uncharacterised protein family YjeN BRM88_05980 IPR022123 Protein of unknown function DUF3658 BRM88_05985 IPR001991 Sodium:dicarboxylate symporter BRM88_05985 IPR036458 BRM88_05985 BRM88_05990 IPR005474 Transketolase, N-terminal BRM88_05990 IPR005475 Transketolase-like, pyrimidine-binding domain BRM88_05990 IPR005478 Transketolase, bacterial-like BRM88_05990 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II BRM88_05990 IPR020826 Transketolase binding site BRM88_05990 IPR029061 Thiamin diphosphate-binding fold BRM88_05990 IPR033248 BRM88_05990 BRM88_06000 IPR011055 Duplicated hybrid motif BRM88_06000 IPR016047 Peptidase M23 BRM88_06005 IPR002477 Peptidoglycan binding-like BRM88_06005 IPR005490 L,D-transpeptidase catalytic domain BRM88_06005 IPR036365 BRM88_06005 BRM88_06005 IPR036366 BRM88_06005 BRM88_06005 IPR038063 BRM88_06005 BRM88_06010 IPR000531 TonB-dependent receptor, beta-barrel BRM88_06010 IPR010104 Bacterial TonB-dependent receptor BRM88_06010 IPR012910 TonB-dependent receptor, plug BRM88_06010 IPR036942 BRM88_06010 BRM88_06010 IPR037066 BRM88_06010 BRM88_06015 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain BRM88_06015 IPR032075 BRM88_06015 BRM88_06020 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain BRM88_06020 IPR037171 BRM88_06020 BRM88_06020 IPR038460 BRM88_06020 BRM88_06025 IPR022050 Thermostable hemolysin BRM88_06030 IPR000873 AMP-dependent synthetase/ligase BRM88_06030 IPR020845 AMP-binding, conserved site BRM88_06035 IPR016084 Haem oxygenase-like, multi-helical BRM88_06040 IPR002347 Glucose/ribitol dehydrogenase BRM88_06040 IPR020904 Short-chain dehydrogenase/reductase, conserved site BRM88_06040 IPR036291 BRM88_06040 BRM88_06050 IPR001789 Signal transduction response regulator, receiver domain BRM88_06050 IPR001867 Signal transduction response regulator, C-terminal BRM88_06050 IPR011006 CheY-like superfamily BRM88_06050 IPR016032 Signal transduction response regulator, C-terminal effector BRM88_06050 IPR036388 BRM88_06050 BRM88_06055 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_06055 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_06055 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_06055 IPR013727 Two-component sensor kinase N-terminal BRM88_06055 IPR036097 BRM88_06055 BRM88_06055 IPR036890 BRM88_06055 BRM88_06060 IPR005650 BlaI transcriptional regulatory family BRM88_06060 IPR036388 BRM88_06060 BRM88_06060 IPR036390 BRM88_06060 BRM88_06065 IPR003538 Gram-negative bacterial TonB protein BRM88_06065 IPR006260 TonB, C-terminal BRM88_06065 IPR008756 Peptidase M56 BRM88_06065 IPR037682 BRM88_06065 BRM88_06075 IPR003439 ABC transporter-like BRM88_06075 IPR003593 AAA+ ATPase domain BRM88_06075 IPR011868 Molybdate ABC transporter, ATP-binding protein BRM88_06075 IPR017871 ABC transporter, conserved site BRM88_06075 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_06080 IPR000515 MetI-like domain BRM88_06080 IPR011867 Molybdate ABC transporter, permease protein BRM88_06080 IPR035906 BRM88_06080 BRM88_06085 IPR005950 Molybdenum ABC transporter, periplasmic binding protein BRM88_06090 IPR001279 Beta-lactamase-like BRM88_06090 IPR036866 BRM88_06090 BRM88_06095 IPR003154 S1/P1 nuclease BRM88_06095 IPR008947 Phospholipase C/P1 nuclease domain BRM88_06125 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I BRM88_06125 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain BRM88_06125 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain BRM88_06125 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site BRM88_06125 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family BRM88_06125 IPR036291 BRM88_06125 BRM88_06140 IPR024442 Transposase, zinc-ribbon BRM88_06140 IPR024445 Transposase, ISXO2-like BRM88_06145 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_06145 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_06145 IPR036097 BRM88_06145 BRM88_06145 IPR036890 BRM88_06145 BRM88_06150 IPR001789 Signal transduction response regulator, receiver domain BRM88_06150 IPR001867 Signal transduction response regulator, C-terminal BRM88_06150 IPR011006 CheY-like superfamily BRM88_06150 IPR036388 BRM88_06150 BRM88_06160 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX BRM88_06160 IPR013651 ATP-grasp fold, RimK-type BRM88_06160 IPR013815 ATP-grasp fold, subdomain 1 BRM88_06160 IPR023533 Ribosomal S6 modification enzyme RimK BRM88_06170 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BRM88_06170 IPR025902 LssY-like C-terminal domain BRM88_06170 IPR032816 BRM88_06170 BRM88_06170 IPR036938 BRM88_06170 BRM88_06175 IPR011009 Protein kinase-like domain BRM88_06190 IPR024291 Protein of unknown function DUF3829 BRM88_06195 IPR024291 Protein of unknown function DUF3829 BRM88_06200 IPR005821 Ion transport domain BRM88_06200 IPR028325 Voltage-gated potassium channel BRM88_06205 IPR004636 Acetylornithine/Succinylornithine transaminase family BRM88_06205 IPR005814 Aminotransferase class-III BRM88_06205 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BRM88_06205 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BRM88_06205 IPR015424 Pyridoxal phosphate-dependent transferase BRM88_06210 IPR006439 HAD hydrolase, subfamily IA BRM88_06210 IPR023198 Phosphoglycolate phosphatase, domain 2 BRM88_06210 IPR023214 HAD-like domain BRM88_06210 IPR036412 BRM88_06210 BRM88_06220 IPR002937 Amine oxidase BRM88_06220 IPR036188 BRM88_06220 BRM88_06225 IPR009056 Cytochrome c-like domain BRM88_06225 IPR036909 BRM88_06225 BRM88_06230 IPR006175 YjgF/Yer057p/UK114 family BRM88_06230 IPR019897 YjgF-like protein, conserved site BRM88_06230 IPR035959 BRM88_06230 BRM88_06240 IPR000923 Blue (type 1) copper domain BRM88_06240 IPR008972 Cupredoxin BRM88_06240 IPR014068 Azurin, proteobacteria BRM88_06240 IPR028871 Blue (type 1) copper protein, binding site BRM88_06250 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase BRM88_06250 IPR005814 Aminotransferase class-III BRM88_06250 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BRM88_06250 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BRM88_06250 IPR015424 Pyridoxal phosphate-dependent transferase BRM88_06260 IPR036942 BRM88_06260 BRM88_06265 IPR001584 Integrase, catalytic core BRM88_06265 IPR012337 Ribonuclease H-like domain BRM88_06265 IPR025246 Transposase IS30-like HTH domain BRM88_06270 IPR001584 Integrase, catalytic core BRM88_06270 IPR012337 Ribonuclease H-like domain BRM88_06270 IPR025948 HTH-like domain BRM88_06270 IPR036397 BRM88_06270 BRM88_06275 IPR002514 Transposase IS3/IS911family BRM88_06275 IPR009057 Homeodomain-like BRM88_06280 IPR005042 Avirulence protein PthA-related, Xanthomonas species BRM88_06300 IPR005042 Avirulence protein PthA-related, Xanthomonas species BRM88_06320 IPR005042 Avirulence protein PthA-related, Xanthomonas species BRM88_06335 IPR005042 Avirulence protein PthA-related, Xanthomonas species BRM88_06355 IPR000257 Uroporphyrinogen decarboxylase (URO-D) BRM88_06355 IPR006361 Uroporphyrinogen decarboxylase HemE BRM88_06355 IPR038071 BRM88_06355 BRM88_06360 IPR036930 BRM88_06360 BRM88_06365 IPR016037 3-dehydroquinate synthase AroB BRM88_06365 IPR030960 BRM88_06365 BRM88_06365 IPR030963 BRM88_06365 BRM88_06370 IPR000623 Shikimate kinase/Threonine synthase-like 1 BRM88_06370 IPR023000 Shikimate kinase, conserved site BRM88_06370 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_06370 IPR031322 BRM88_06370 BRM88_06375 IPR000659 Pyridoxamine 5'-phosphate oxidase BRM88_06375 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain BRM88_06375 IPR012349 FMN-binding split barrel BRM88_06375 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal BRM88_06375 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site BRM88_06380 IPR019231 Protein of unknown function DUF2170 BRM88_06385 IPR007157 PspA/IM30 BRM88_06390 IPR013099 Two pore domain potassium channel domain BRM88_06390 IPR036291 BRM88_06390 BRM88_06395 IPR019621 Protein of unknown function DUF2491 BRM88_06400 IPR007140 Protein of unknown function DUF350 BRM88_06405 IPR009576 Biofilm formation YgiB BRM88_06410 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain BRM88_06410 IPR016185 Pre-ATP-grasp domain BRM88_06425 IPR000551 MerR-type HTH domain BRM88_06425 IPR009061 DNA binding domain, putative BRM88_06425 IPR010211 Redox-sensitive transcriptional activator SoxR BRM88_06425 IPR015358 Transcription regulator MerR, DNA binding BRM88_06430 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal BRM88_06435 IPR000531 TonB-dependent receptor, beta-barrel BRM88_06435 IPR010104 Bacterial TonB-dependent receptor BRM88_06435 IPR012910 TonB-dependent receptor, plug BRM88_06435 IPR037066 BRM88_06435 BRM88_06445 IPR010836 SapC BRM88_06450 IPR003347 JmjC domain BRM88_06455 IPR006905 Tryptophan halogenase BRM88_06455 IPR033856 BRM88_06455 BRM88_06455 IPR036188 BRM88_06455 BRM88_06460 IPR001279 Beta-lactamase-like BRM88_06460 IPR036866 BRM88_06460 BRM88_06475 IPR009003 Trypsin-like cysteine/serine peptidase domain BRM88_06480 IPR002293 Amino acid/polyamine transporter I BRM88_06485 IPR000792 Transcription regulator LuxR, C-terminal BRM88_06485 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain BRM88_06485 IPR016032 Signal transduction response regulator, C-terminal effector BRM88_06485 IPR036388 BRM88_06485 BRM88_06485 IPR036693 BRM88_06485 BRM88_06490 IPR000073 Alpha/beta hydrolase fold-1 BRM88_06490 IPR002410 Peptidase S33 BRM88_06490 IPR005945 Proline-specific peptidase BRM88_06490 IPR029058 Alpha/Beta hydrolase fold BRM88_06500 IPR002293 Amino acid/polyamine transporter I BRM88_06500 IPR004840 Amino acid permease, conserved site BRM88_06500 IPR004841 Amino acid permease/ SLC12A domain BRM88_06510 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 BRM88_06510 IPR032877 BRM88_06510 BRM88_06520 IPR002585 Cytochrome d ubiquinol oxidase, subunit I BRM88_06525 IPR003317 Cytochrome d ubiquinol oxidase, subunit II BRM88_06530 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BRM88_06530 IPR029058 Alpha/Beta hydrolase fold BRM88_06535 IPR000644 CBS domain BRM88_06535 IPR006667 SLC41 divalent cation transporters, integral membrane domain BRM88_06535 IPR006668 Magnesium transporter, MgtE intracellular domain BRM88_06535 IPR006669 Magnesium transporter MgtE BRM88_06535 IPR036739 BRM88_06535 BRM88_06535 IPR038048 BRM88_06535 BRM88_06535 IPR038076 BRM88_06535 BRM88_06545 IPR000121 PEP-utilising enzyme, C-terminal BRM88_06545 IPR006318 Phosphoenolpyruvate-utilising enzyme BRM88_06545 IPR008279 PEP-utilising enzyme, mobile domain BRM88_06545 IPR008731 Phosphotransferase system, enzyme I N-terminal BRM88_06545 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain BRM88_06545 IPR023151 PEP-utilising enzyme, conserved site BRM88_06545 IPR024692 Phosphotransferase system, enzyme I BRM88_06545 IPR036618 BRM88_06545 BRM88_06545 IPR036637 BRM88_06545 BRM88_06550 IPR000032 Phosphocarrier HPr protein-like BRM88_06550 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BRM88_06550 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BRM88_06550 IPR035895 BRM88_06550 BRM88_06555 IPR004701 Phosphotransferase system, mannose-type IIA component BRM88_06555 IPR036662 BRM88_06555 BRM88_06560 IPR005337 ATPase, P-loop-containing BRM88_06560 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_06565 IPR003755 HPr(Ser) kinase/phosphorylase BRM88_06565 IPR011104 HPr kinase/phosphorylase, C-terminal BRM88_06565 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal BRM88_06565 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like BRM88_06570 IPR002178 PTS EIIA type-2 domain BRM88_06570 IPR016152 Phosphotransferase/anion transporter BRM88_06575 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein BRM88_06575 IPR036567 BRM88_06575 BRM88_06580 IPR000394 RNA polymerase sigma factor 54 BRM88_06580 IPR007046 RNA polymerase sigma factor 54, core-binding BRM88_06580 IPR007634 RNA polymerase sigma factor 54, DNA-binding BRM88_06580 IPR038709 BRM88_06580 BRM88_06585 IPR003439 ABC transporter-like BRM88_06585 IPR003593 AAA+ ATPase domain BRM88_06585 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_06585 IPR030921 BRM88_06585 BRM88_06585 IPR032823 BRM88_06585 BRM88_06590 IPR005653 Organic solvent tolerance-like, N-terminal BRM88_06590 IPR014340 Lipopolysaccharide assembly, LptA BRM88_06595 IPR010664 Lipopolysaccharide assembly, LptC-related BRM88_06595 IPR026265 Lipopolysaccharide export system protein LptC BRM88_06600 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase BRM88_06600 IPR023214 HAD-like domain BRM88_06600 IPR036412 BRM88_06600 BRM88_06605 IPR000644 CBS domain BRM88_06605 IPR001347 Sugar isomerase (SIS) BRM88_06605 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type BRM88_06610 IPR002634 BolA protein BRM88_06610 IPR036065 BRM88_06610 BRM88_06615 IPR005735 Zinc finger, LSD1-type BRM88_06620 IPR001986 Enolpyruvate transferase domain BRM88_06620 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase BRM88_06620 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta BRM88_06620 IPR036968 BRM88_06620 BRM88_06630 IPR021457 Protein of unknown function DUF3108 BRM88_06635 IPR021457 Protein of unknown function DUF3108 BRM88_06640 IPR002376 Formyl transferase, N-terminal BRM88_06640 IPR004607 Phosphoribosylglycinamide formyltransferase BRM88_06640 IPR036477 BRM88_06640 BRM88_06645 IPR014509 Uncharacterised conserved protein UCP020606 BRM88_06655 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase BRM88_06655 IPR010918 AIR synthase-related protein, C-terminal domain BRM88_06655 IPR016188 PurM, N-terminal-like BRM88_06655 IPR036676 BRM88_06655 BRM88_06655 IPR036921 BRM88_06655 BRM88_06660 IPR018642 Protein of unknown function DUF2066 BRM88_06665 IPR002549 Uncharacterised protein family UPF0118 BRM88_06670 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) BRM88_06670 IPR017788 DnaA regulatory inactivator Hda BRM88_06670 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_06675 IPR005835 Nucleotidyl transferase BRM88_06675 IPR029044 Nucleotide-diphospho-sugar transferases BRM88_06680 IPR002575 Aminoglycoside phosphotransferase BRM88_06680 IPR011009 Protein kinase-like domain BRM88_06685 IPR007341 Transglycosylase-associated protein BRM88_06695 IPR002933 Peptidase M20 BRM88_06695 IPR011650 Peptidase M20, dimerisation domain BRM88_06700 IPR004509 Competence protein ComEA, helix-hairpin-helix domain BRM88_06700 IPR010994 RuvA domain 2-like BRM88_06710 IPR010282 Uncharacterised protein family HutD/Ves BRM88_06710 IPR011051 RmlC-like cupin domain BRM88_06710 IPR014710 RmlC-like jelly roll fold BRM88_06720 IPR024442 Transposase, zinc-ribbon BRM88_06720 IPR024445 Transposase, ISXO2-like BRM88_06735 IPR010720 Alpha-L-arabinofuranosidase, C-terminal BRM88_06735 IPR013780 Glycosyl hydrolase, family 13, all-beta BRM88_06735 IPR017853 Glycoside hydrolase, superfamily BRM88_06740 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase BRM88_06740 IPR011013 Galactose mutarotase-like domain BRM88_06740 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup BRM88_06740 IPR015443 Aldose 1-epimerase BRM88_06745 IPR002541 Cytochrome c assembly protein BRM88_06755 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain BRM88_06755 IPR003593 AAA+ ATPase domain BRM88_06755 IPR004125 Signal recognition particle, SRP54 subunit, M-domain BRM88_06755 IPR004780 Signal recognition particle protein Ffh BRM88_06755 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle BRM88_06755 IPR022941 Signal recognition particle, SRP54 subunit BRM88_06755 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_06755 IPR036891 BRM88_06755 BRM88_06770 IPR004136 2-nitropropane dioxygenase, NPD BRM88_06770 IPR013785 Aldolase-type TIM barrel BRM88_06775 IPR001544 Aminotransferase, class IV BRM88_06775 IPR036038 BRM88_06775 BRM88_06780 IPR000307 Ribosomal protein S16 BRM88_06780 IPR020592 Ribosomal protein S16, conserved site BRM88_06780 IPR023803 Ribosomal protein S16 domain BRM88_06785 IPR002676 RimM protein BRM88_06785 IPR009000 Translation protein, beta-barrel domain BRM88_06785 IPR011033 PRC-barrel-like BRM88_06785 IPR011961 16S rRNA processing protein RimM BRM88_06785 IPR027275 PRC-barrel domain BRM88_06785 IPR036976 BRM88_06785 BRM88_06790 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria BRM88_06790 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain BRM88_06790 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal BRM88_06790 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BRM88_06790 IPR029028 Alpha/beta knot methyltransferases BRM88_06795 IPR001857 Ribosomal protein L19 BRM88_06795 IPR008991 Translation protein SH3-like domain BRM88_06795 IPR018257 Ribosomal protein L19, conserved site BRM88_06795 IPR038657 BRM88_06795 BRM88_06805 IPR002528 Multi antimicrobial extrusion protein BRM88_06810 IPR002942 RNA-binding S4 domain BRM88_06810 IPR036986 BRM88_06810 BRM88_06825 IPR002559 Transposase, IS4-like BRM88_06825 IPR012337 Ribonuclease H-like domain BRM88_06835 IPR036249 BRM88_06835 BRM88_06840 IPR000305 GIY-YIG nuclease superfamily BRM88_06840 IPR035901 BRM88_06840 BRM88_06845 IPR001270 ClpA/B family BRM88_06845 IPR003593 AAA+ ATPase domain BRM88_06845 IPR003959 ATPase, AAA-type, core BRM88_06845 IPR004176 Clp, N-terminal BRM88_06845 IPR017730 Chaperonin ClpB BRM88_06845 IPR018368 ClpA/B, conserved site 1 BRM88_06845 IPR019489 Clp ATPase, C-terminal BRM88_06845 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_06845 IPR028299 ClpA/B, conserved site 2 BRM88_06845 IPR036628 BRM88_06845 BRM88_06885 IPR000531 TonB-dependent receptor, beta-barrel BRM88_06885 IPR010101 TonB-dependent vitamin B12 transporter BtuB BRM88_06885 IPR012910 TonB-dependent receptor, plug BRM88_06885 IPR036942 BRM88_06885 BRM88_06885 IPR037066 BRM88_06885 BRM88_06910 IPR003724 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR BRM88_06910 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain BRM88_06910 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_06920 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase BRM88_06920 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_06925 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like BRM88_06925 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic BRM88_06925 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal BRM88_06925 IPR036087 BRM88_06925 BRM88_06930 IPR013078 Histidine phosphatase superfamily, clade-1 BRM88_06930 IPR029033 Histidine phosphatase superfamily BRM88_06935 IPR003805 Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase BRM88_06945 IPR000183 Ornithine/DAP/Arg decarboxylase BRM88_06945 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal BRM88_06945 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal BRM88_06945 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal BRM88_06945 IPR029066 PLP-binding barrel BRM88_06950 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal BRM88_06950 IPR022770 Ferric iron reductase FhuF domain BRM88_06955 IPR011701 Major facilitator superfamily BRM88_06955 IPR036259 BRM88_06955 BRM88_06960 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal BRM88_06960 IPR022770 Ferric iron reductase FhuF domain BRM88_06970 IPR000531 TonB-dependent receptor, beta-barrel BRM88_06970 IPR010105 TonB-dependent siderophore receptor BRM88_06970 IPR012910 TonB-dependent receptor, plug BRM88_06970 IPR036942 BRM88_06970 BRM88_06970 IPR037066 BRM88_06970 BRM88_06975 IPR005000 HpcH/HpaI aldolase/citrate lyase domain BRM88_06975 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain BRM88_06985 IPR003148 Regulator of K+ conductance, N-terminal BRM88_06985 IPR006153 Cation/H+ exchanger BRM88_06985 IPR036291 BRM88_06985 BRM88_06985 IPR038770 BRM88_06985 BRM88_06995 IPR000531 TonB-dependent receptor, beta-barrel BRM88_06995 IPR010916 TonB box, conserved site BRM88_06995 IPR012910 TonB-dependent receptor, plug BRM88_06995 IPR036942 BRM88_06995 BRM88_06995 IPR037066 BRM88_06995 BRM88_07000 IPR000531 TonB-dependent receptor, beta-barrel BRM88_07000 IPR010916 TonB box, conserved site BRM88_07000 IPR012910 TonB-dependent receptor, plug BRM88_07000 IPR036942 BRM88_07000 BRM88_07000 IPR037066 BRM88_07000 BRM88_07005 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BRM88_07005 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BRM88_07015 IPR000531 TonB-dependent receptor, beta-barrel BRM88_07015 IPR010916 TonB box, conserved site BRM88_07015 IPR012910 TonB-dependent receptor, plug BRM88_07015 IPR036942 BRM88_07015 BRM88_07015 IPR037066 BRM88_07015 BRM88_07020 IPR003439 ABC transporter-like BRM88_07020 IPR003593 AAA+ ATPase domain BRM88_07020 IPR017871 ABC transporter, conserved site BRM88_07020 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_07020 IPR032524 BRM88_07020 BRM88_07020 IPR032781 BRM88_07020 BRM88_07035 IPR000847 Transcription regulator HTH, LysR BRM88_07035 IPR005119 LysR, substrate-binding BRM88_07035 IPR036388 BRM88_07035 BRM88_07035 IPR036390 BRM88_07035 BRM88_07045 IPR013094 Alpha/beta hydrolase fold-3 BRM88_07045 IPR029058 Alpha/Beta hydrolase fold BRM88_07060 IPR001867 Signal transduction response regulator, C-terminal BRM88_07060 IPR011006 CheY-like superfamily BRM88_07060 IPR016032 Signal transduction response regulator, C-terminal effector BRM88_07060 IPR036388 BRM88_07060 BRM88_07065 IPR009057 Homeodomain-like BRM88_07065 IPR011990 Tetratricopeptide-like helical domain BRM88_07065 IPR018060 DNA binding HTH domain, AraC-type BRM88_07065 IPR018062 HTH domain AraC-type, conserved site BRM88_07070 IPR001404 Heat shock protein Hsp90 family BRM88_07070 IPR020568 Ribosomal protein S5 domain 2-type fold BRM88_07070 IPR020575 Heat shock protein Hsp90, N-terminal BRM88_07070 IPR036890 BRM88_07070 BRM88_07075 IPR011990 Tetratricopeptide-like helical domain BRM88_07100 IPR001207 Transposase, mutator type BRM88_07105 IPR008146 Glutamine synthetase, catalytic domain BRM88_07105 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain BRM88_07105 IPR036651 BRM88_07105 BRM88_07110 IPR029062 Class I glutamine amidotransferase-like BRM88_07110 IPR033752 BRM88_07110 BRM88_07115 IPR001123 Lysine-type exporter protein (LYSE/YGGA) BRM88_07120 IPR011697 Peptidase C26 BRM88_07120 IPR029062 Class I glutamine amidotransferase-like BRM88_07125 IPR005804 Fatty acid desaturase, type 1 BRM88_07130 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme BRM88_07130 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BRM88_07130 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BRM88_07130 IPR015424 Pyridoxal phosphate-dependent transferase BRM88_07135 IPR000192 Aminotransferase class V domain BRM88_07135 IPR012703 2-aminoethylphosphonate--pyruvate transaminase BRM88_07135 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BRM88_07135 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BRM88_07135 IPR015424 Pyridoxal phosphate-dependent transferase BRM88_07135 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase BRM88_07145 IPR024442 Transposase, zinc-ribbon BRM88_07145 IPR024445 Transposase, ISXO2-like BRM88_07165 IPR017941 Rieske [2Fe-2S] iron-sulphur domain BRM88_07165 IPR036922 BRM88_07165 BRM88_07170 IPR000182 GNAT domain BRM88_07170 IPR016181 Acyl-CoA N-acyltransferase BRM88_07180 IPR000192 Aminotransferase class V domain BRM88_07180 IPR010970 Cysteine desulfurase, SufS BRM88_07180 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BRM88_07180 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BRM88_07180 IPR015424 Pyridoxal phosphate-dependent transferase BRM88_07180 IPR016454 Cysteine desulfurase, NifS BRM88_07180 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site BRM88_07185 IPR000825 SUF system FeS cluster assembly, SufBD BRM88_07185 IPR011542 SUF system FeS cluster assembly, SufD BRM88_07185 IPR037284 BRM88_07185 BRM88_07190 IPR003439 ABC transporter-like BRM88_07190 IPR003593 AAA+ ATPase domain BRM88_07190 IPR010230 FeS cluster assembly SUF system, ATPase SufC BRM88_07190 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_07195 IPR000825 SUF system FeS cluster assembly, SufBD BRM88_07195 IPR010231 SUF system FeS cluster assembly, SufB BRM88_07195 IPR037284 BRM88_07195 BRM88_07200 IPR000944 Transcription regulator Rrf2-like BRM88_07200 IPR014290 SUF system FeS cluster assembly, Rtf2-type regulator BRM88_07200 IPR036388 BRM88_07200 BRM88_07200 IPR036390 BRM88_07200 BRM88_07205 IPR001214 SET domain BRM88_07210 IPR029062 Class I glutamine amidotransferase-like BRM88_07220 IPR002818 ThiJ/PfpI BRM88_07220 IPR029062 Class I glutamine amidotransferase-like BRM88_07225 IPR010835 Protein of unknown function DUF1439 BRM88_07235 IPR024476 Protein of unknown function DUF3861 BRM88_07240 IPR011055 Duplicated hybrid motif BRM88_07240 IPR016047 Peptidase M23 BRM88_07245 IPR000119 Histone-like bacterial DNA-binding protein BRM88_07245 IPR010992 Integration host factor (IHF)-like DNA-binding domain BRM88_07255 IPR002559 Transposase, IS4-like BRM88_07255 IPR008490 Transposase InsH, N-terminal BRM88_07270 IPR000304 Pyrroline-5-carboxylate reductase BRM88_07270 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like BRM88_07270 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal BRM88_07270 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain BRM88_07270 IPR036291 BRM88_07270 BRM88_07275 IPR001608 Alanine racemase, N-terminal BRM88_07275 IPR011078 Uncharacterised protein family UPF0001 BRM88_07275 IPR029066 PLP-binding barrel BRM88_07280 IPR001482 Type II secretion system protein E BRM88_07280 IPR003593 AAA+ ATPase domain BRM88_07280 IPR006321 Pilus retraction protein PilT BRM88_07280 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_07285 IPR001482 Type II secretion system protein E BRM88_07285 IPR006321 Pilus retraction protein PilT BRM88_07285 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_07290 IPR003740 Membrane Protein of unknown function DUF161 BRM88_07310 IPR005019 Methyladenine glycosylase BRM88_07310 IPR011257 DNA glycosylase BRM88_07320 IPR003774 Protein of unknown function UPF0301 BRM88_07325 IPR005227 Resolvase, holliday junction-type, YqgF-like BRM88_07325 IPR006641 YqgF/RNase H-like domain BRM88_07325 IPR012337 Ribonuclease H-like domain BRM88_07325 IPR037027 BRM88_07325 BRM88_07330 IPR002082 Aspartate carbamoyltransferase BRM88_07330 IPR006130 Aspartate/ornithine carbamoyltransferase BRM88_07330 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain BRM88_07330 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding BRM88_07330 IPR036901 BRM88_07330 BRM88_07340 IPR003718 OsmC/Ohr family BRM88_07340 IPR015946 K homology domain-like, alpha/beta BRM88_07340 IPR019904 Peroxiredoxin OsmC BRM88_07340 IPR036102 BRM88_07340 BRM88_07345 IPR008816 Glycine zipper 2TM domain BRM88_07350 IPR003719 Phenazine biosynthesis PhzF protein BRM88_07360 IPR000183 Ornithine/DAP/Arg decarboxylase BRM88_07360 IPR001048 Aspartate/glutamate/uridylate kinase BRM88_07360 IPR001341 Aspartate kinase domain BRM88_07360 IPR002986 Diaminopimelate decarboxylase, LysA BRM88_07360 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal BRM88_07360 IPR011246 Bifunctional diaminopimelate decarboxylase/aspartate kinase BRM88_07360 IPR018042 Aspartate kinase, conserved site BRM88_07360 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal BRM88_07360 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal BRM88_07360 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site BRM88_07360 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site BRM88_07360 IPR029066 PLP-binding barrel BRM88_07360 IPR036393 BRM88_07360 BRM88_07375 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase BRM88_07375 IPR013221 Mur ligase, central BRM88_07375 IPR018109 Folylpolyglutamate synthetase, conserved site BRM88_07375 IPR036565 BRM88_07375 BRM88_07375 IPR036615 BRM88_07375 BRM88_07385 IPR002925 Dienelactone hydrolase BRM88_07385 IPR029058 Alpha/Beta hydrolase fold BRM88_07390 IPR000092 Polyprenyl synthetase BRM88_07390 IPR008949 Terpenoid synthase BRM88_07390 IPR033749 BRM88_07390 BRM88_07395 IPR000424 Primosome PriB/single-strand DNA-binding BRM88_07395 IPR011344 Single-stranded DNA-binding protein BRM88_07395 IPR012340 Nucleic acid-binding, OB-fold BRM88_07400 IPR000160 GGDEF domain BRM88_07400 IPR029787 Nucleotide cyclase BRM88_07400 IPR033479 BRM88_07400 BRM88_07420 IPR024442 Transposase, zinc-ribbon BRM88_07420 IPR024445 Transposase, ISXO2-like BRM88_07430 IPR006439 HAD hydrolase, subfamily IA BRM88_07430 IPR023198 Phosphoglycolate phosphatase, domain 2 BRM88_07430 IPR023214 HAD-like domain BRM88_07430 IPR036412 BRM88_07430 BRM88_07440 IPR007423 Protein of unknown function DUF466 BRM88_07445 IPR003706 Carbon starvation protein CstA BRM88_07445 IPR025299 CstA C-terminal domain BRM88_07450 IPR003829 Pirin, N-terminal domain BRM88_07450 IPR008778 Pirin, C-terminal domain BRM88_07450 IPR011051 RmlC-like cupin domain BRM88_07450 IPR012093 Pirin BRM88_07450 IPR014710 RmlC-like jelly roll fold BRM88_07460 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein BRM88_07460 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset BRM88_07460 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal BRM88_07460 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain BRM88_07460 IPR037026 BRM88_07460 BRM88_07465 IPR025391 Domain of unknown function DUF4123 BRM88_07470 IPR021733 Protein of unknown function DUF3304 BRM88_07480 IPR002559 Transposase, IS4-like BRM88_07480 IPR008490 Transposase InsH, N-terminal BRM88_07490 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein BRM88_07490 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal BRM88_07490 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain BRM88_07490 IPR037026 BRM88_07490 BRM88_07495 IPR025391 Domain of unknown function DUF4123 BRM88_07505 IPR021733 Protein of unknown function DUF3304 BRM88_07515 IPR021733 Protein of unknown function DUF3304 BRM88_07520 IPR018712 Domain of unknown function DUF2235 BRM88_07525 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal BRM88_07525 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain BRM88_07525 IPR037026 BRM88_07525 BRM88_07530 IPR025391 Domain of unknown function DUF4123 BRM88_07535 IPR021733 Protein of unknown function DUF3304 BRM88_07545 IPR021733 Protein of unknown function DUF3304 BRM88_07550 IPR021733 Protein of unknown function DUF3304 BRM88_07555 IPR021733 Protein of unknown function DUF3304 BRM88_07560 IPR021733 Protein of unknown function DUF3304 BRM88_07565 IPR018712 Domain of unknown function DUF2235 BRM88_07580 IPR003829 Pirin, N-terminal domain BRM88_07580 IPR008778 Pirin, C-terminal domain BRM88_07580 IPR011051 RmlC-like cupin domain BRM88_07580 IPR012093 Pirin BRM88_07580 IPR014710 RmlC-like jelly roll fold BRM88_07590 IPR007581 Endonuclease V BRM88_07595 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site BRM88_07595 IPR005952 Phosphoglycerate mutase 1 BRM88_07595 IPR013078 Histidine phosphatase superfamily, clade-1 BRM88_07595 IPR029033 Histidine phosphatase superfamily BRM88_07610 IPR008753 Peptidase M13, N-terminal domain BRM88_07610 IPR018497 Peptidase M13, C-terminal domain BRM88_07610 IPR024079 Metallopeptidase, catalytic domain BRM88_07620 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase BRM88_07620 IPR001789 Signal transduction response regulator, receiver domain BRM88_07620 IPR008248 Signal transduction response regulator, chemotaxis, CheB BRM88_07620 IPR011006 CheY-like superfamily BRM88_07620 IPR035909 BRM88_07620 BRM88_07625 IPR000780 MCP methyltransferase, CheR-type BRM88_07625 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal BRM88_07625 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal BRM88_07625 IPR026024 Chemotaxis protein methyltransferase CheR BRM88_07625 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_07625 IPR036804 BRM88_07625 BRM88_07630 IPR001633 EAL domain BRM88_07630 IPR001789 Signal transduction response regulator, receiver domain BRM88_07630 IPR011006 CheY-like superfamily BRM88_07630 IPR035919 BRM88_07630 BRM88_07635 IPR002545 CheW-like protein BRM88_07635 IPR036061 BRM88_07635 BRM88_07640 IPR003660 HAMP linker domain BRM88_07640 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BRM88_07640 IPR004090 Chemotaxis methyl-accepting receptor BRM88_07645 IPR002545 CheW-like protein BRM88_07645 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_07645 IPR004105 Histidine kinase CheA-like, homodimeric domain BRM88_07645 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_07645 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BRM88_07645 IPR036061 BRM88_07645 BRM88_07645 IPR036097 BRM88_07645 BRM88_07645 IPR036641 BRM88_07645 BRM88_07645 IPR036890 BRM88_07645 BRM88_07645 IPR037006 BRM88_07645 BRM88_07650 IPR002645 STAS domain BRM88_07650 IPR036513 BRM88_07650 BRM88_07655 IPR001650 Helicase, C-terminal BRM88_07655 IPR003711 CarD-like/TRCF domain BRM88_07655 IPR004576 Transcription-repair coupling factor BRM88_07655 IPR005118 Transcription-repair-coupling factor, C-terminal domain BRM88_07655 IPR011545 DEAD/DEAH box helicase domain BRM88_07655 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BRM88_07655 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_07655 IPR036101 BRM88_07655 BRM88_07655 IPR037235 BRM88_07655 BRM88_07660 IPR000182 GNAT domain BRM88_07660 IPR016181 Acyl-CoA N-acyltransferase BRM88_07665 IPR007473 Ribosomal RNA large subunit methyltransferase J BRM88_07665 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_07685 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_07685 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_07685 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_07685 IPR036097 BRM88_07685 BRM88_07685 IPR036890 BRM88_07685 BRM88_07695 IPR000668 Peptidase C1A, papain C-terminal BRM88_07695 IPR025660 Cysteine peptidase, histidine active site BRM88_07695 IPR038765 BRM88_07695 BRM88_07700 IPR010364 Uncharacterised protein family, inner membrane CreD BRM88_07710 IPR002559 Transposase, IS4-like BRM88_07710 IPR008490 Transposase InsH, N-terminal BRM88_07715 IPR009057 Homeodomain-like BRM88_07715 IPR025959 Winged helix-turn helix domain BRM88_07715 IPR038717 BRM88_07715 BRM88_07720 IPR000668 Peptidase C1A, papain C-terminal BRM88_07720 IPR025660 Cysteine peptidase, histidine active site BRM88_07720 IPR038765 BRM88_07720 BRM88_07725 IPR010364 Uncharacterised protein family, inner membrane CreD BRM88_07735 IPR002559 Transposase, IS4-like BRM88_07735 IPR008490 Transposase InsH, N-terminal BRM88_07740 IPR000668 Peptidase C1A, papain C-terminal BRM88_07740 IPR038765 BRM88_07740 BRM88_07745 IPR016181 Acyl-CoA N-acyltransferase BRM88_07755 IPR012337 Ribonuclease H-like domain BRM88_07755 IPR025246 Transposase IS30-like HTH domain BRM88_07760 IPR003010 Carbon-nitrogen hydrolase BRM88_07760 IPR036526 BRM88_07760 BRM88_07770 IPR000924 Glutamyl/glutaminyl-tRNA synthetase BRM88_07770 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BRM88_07770 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial BRM88_07770 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding BRM88_07770 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_07770 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain BRM88_07770 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 BRM88_07775 IPR002481 Ferric-uptake regulator BRM88_07775 IPR036388 BRM88_07775 BRM88_07775 IPR036390 BRM88_07775 BRM88_07785 IPR011051 RmlC-like cupin domain BRM88_07785 IPR013096 Cupin 2, conserved barrel BRM88_07785 IPR014710 RmlC-like jelly roll fold BRM88_07815 IPR007403 Protein of unknown function DUF456 BRM88_07820 IPR002059 Cold-shock protein, DNA-binding BRM88_07820 IPR011129 Cold shock protein BRM88_07820 IPR012156 Cold shock, CspA BRM88_07820 IPR012340 Nucleic acid-binding, OB-fold BRM88_07820 IPR019844 Cold-shock conserved site BRM88_07825 IPR008816 Glycine zipper 2TM domain BRM88_07830 IPR002321 Cytochrome c, class II BRM88_07830 IPR010980 Cytochrome c/b562 BRM88_07835 IPR000594 UBA/THIF-type NAD/FAD binding fold BRM88_07835 IPR035985 BRM88_07835 BRM88_07840 IPR001130 TatD family BRM88_07840 IPR018228 Deoxyribonuclease, TatD-related, conserved site BRM88_07840 IPR032466 BRM88_07840 BRM88_07850 IPR008816 Glycine zipper 2TM domain BRM88_07855 IPR006089 Acyl-CoA dehydrogenase, conserved site BRM88_07855 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain BRM88_07855 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal BRM88_07855 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain BRM88_07855 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal BRM88_07855 IPR036250 BRM88_07855 BRM88_07855 IPR037069 BRM88_07855 BRM88_07865 IPR004045 Glutathione S-transferase, N-terminal BRM88_07865 IPR004046 Glutathione S-transferase, C-terminal BRM88_07865 IPR036249 BRM88_07865 BRM88_07865 IPR036282 BRM88_07865 BRM88_07870 IPR001962 Asparagine synthase BRM88_07870 IPR006426 Asparagine synthase, glutamine-hydrolyzing BRM88_07870 IPR017932 Glutamine amidotransferase type 2 domain BRM88_07870 IPR029055 Nucleophile aminohydrolases, N-terminal BRM88_07875 IPR005025 NADPH-dependent FMN reductase-like BRM88_07875 IPR029039 Flavoprotein-like BRM88_07880 IPR007692 DNA helicase, DnaB type BRM88_07880 IPR007693 DNA helicase, DnaB-like, N-terminal BRM88_07880 IPR007694 DNA helicase, DnaB-like, C-terminal BRM88_07880 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BRM88_07880 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_07880 IPR036185 BRM88_07880 BRM88_07885 IPR002081 Cryptochrome/DNA photolyase, class 1 BRM88_07885 IPR005101 DNA photolyase, FAD-binding/Cryptochrome, C-terminal BRM88_07885 IPR006050 DNA photolyase, N-terminal BRM88_07885 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_07885 IPR018394 Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal BRM88_07885 IPR036134 BRM88_07885 BRM88_07885 IPR036155 BRM88_07885 BRM88_07900 IPR006664 Outer membrane protein, bacterial BRM88_07900 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal BRM88_07900 IPR006690 Outer membrane protein, OmpA-like, conserved site BRM88_07900 IPR036737 BRM88_07900 BRM88_07900 IPR039567 BRM88_07900 BRM88_07905 IPR002347 Glucose/ribitol dehydrogenase BRM88_07905 IPR036291 BRM88_07905 BRM88_07910 IPR001584 Integrase, catalytic core BRM88_07910 IPR012337 Ribonuclease H-like domain BRM88_07910 IPR025246 Transposase IS30-like HTH domain BRM88_07910 IPR036397 BRM88_07910 BRM88_07915 IPR000531 TonB-dependent receptor, beta-barrel BRM88_07915 IPR012910 TonB-dependent receptor, plug BRM88_07915 IPR036942 BRM88_07915 BRM88_07915 IPR037066 BRM88_07915 BRM88_07925 IPR004891 MerC mercury resistance protein BRM88_07930 IPR030826 BRM88_07930 BRM88_07935 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site BRM88_07935 IPR011032 GroES (chaperonin 10)-like BRM88_07935 IPR013149 Alcohol dehydrogenase, C-terminal BRM88_07935 IPR013154 Alcohol dehydrogenase GroES-like BRM88_07935 IPR020843 Polyketide synthase, enoylreductase BRM88_07935 IPR036291 BRM88_07935 BRM88_07940 IPR001807 Chloride channel, voltage gated BRM88_07940 IPR014743 Chloride channel, core BRM88_07950 IPR002559 Transposase, IS4-like BRM88_07950 IPR008490 Transposase InsH, N-terminal BRM88_07955 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site BRM88_07955 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain BRM88_07955 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding BRM88_07955 IPR023546 Methylated-DNA--protein-cysteine methyltransferase BRM88_07955 IPR036217 BRM88_07955 BRM88_07955 IPR036388 BRM88_07955 BRM88_07955 IPR036631 BRM88_07955 BRM88_07960 IPR003265 HhH-GPD domain BRM88_07960 IPR004026 Ada DNA repair, metal-binding BRM88_07960 IPR009057 Homeodomain-like BRM88_07960 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal BRM88_07960 IPR011257 DNA glycosylase BRM88_07960 IPR018060 DNA binding HTH domain, AraC-type BRM88_07960 IPR018062 HTH domain AraC-type, conserved site BRM88_07960 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal BRM88_07960 IPR035451 BRM88_07960 BRM88_07960 IPR037046 BRM88_07960 BRM88_07975 IPR025091 Protein of unknown function DUF4019 BRM88_07980 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein BRM88_07980 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain BRM88_07990 IPR036986 BRM88_07990 BRM88_08005 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site BRM88_08005 IPR001650 Helicase, C-terminal BRM88_08005 IPR005580 DbpA, RNA-binding BRM88_08005 IPR011545 DEAD/DEAH box helicase domain BRM88_08005 IPR012677 Nucleotide-binding, alpha-beta plait BRM88_08005 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BRM88_08005 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_08005 IPR028618 ATP-dependent RNA helicase DeaD BRM88_08010 IPR000014 PAS domain BRM88_08010 IPR000160 GGDEF domain BRM88_08010 IPR001610 PAC motif BRM88_08010 IPR001633 EAL domain BRM88_08010 IPR029787 Nucleotide cyclase BRM88_08010 IPR035919 BRM88_08010 BRM88_08010 IPR035965 BRM88_08010 BRM88_08015 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BRM88_08015 IPR002942 RNA-binding S4 domain BRM88_08015 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F BRM88_08015 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site BRM88_08015 IPR020103 Pseudouridine synthase, catalytic domain BRM88_08015 IPR036986 BRM88_08015 BRM88_08040 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase BRM88_08040 IPR010203 Regulator of ribonuclease activity A BRM88_08040 IPR036704 BRM88_08040 BRM88_08045 IPR001466 Beta-lactamase-related BRM88_08045 IPR012338 Beta-lactamase/transpeptidase-like BRM88_08045 IPR021860 Peptidase S12, Pab87-related, C-terminal BRM88_08050 IPR006153 Cation/H+ exchanger BRM88_08050 IPR038770 BRM88_08050 BRM88_08055 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_08055 IPR003660 HAMP linker domain BRM88_08055 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_08055 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_08055 IPR036097 BRM88_08055 BRM88_08055 IPR036890 BRM88_08055 BRM88_08060 IPR001789 Signal transduction response regulator, receiver domain BRM88_08060 IPR001867 Signal transduction response regulator, C-terminal BRM88_08060 IPR011006 CheY-like superfamily BRM88_08060 IPR016032 Signal transduction response regulator, C-terminal effector BRM88_08060 IPR036388 BRM88_08060 BRM88_08065 IPR003423 Outer membrane efflux protein BRM88_08065 IPR010131 RND efflux system, outer membrane lipoprotein, NodT BRM88_08070 IPR010583 MltA-interacting MipA BRM88_08075 IPR006143 RND efflux pump, membrane fusion protein BRM88_08075 IPR039562 BRM88_08075 BRM88_08080 IPR001036 Acriflavin resistance protein BRM88_08080 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BRM88_08085 IPR012912 Plasmid pRiA4b, Orf3 BRM88_08085 IPR024047 Protein MM3350-like domain BRM88_08090 IPR003439 ABC transporter-like BRM88_08090 IPR003593 AAA+ ATPase domain BRM88_08090 IPR011527 ABC transporter type 1, transmembrane domain BRM88_08090 IPR017871 ABC transporter, conserved site BRM88_08090 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_08090 IPR036640 BRM88_08090 BRM88_08100 IPR012337 Ribonuclease H-like domain BRM88_08100 IPR038721 BRM88_08100 BRM88_08110 IPR006530 YD repeat BRM88_08110 IPR022385 Rhs repeat-associated core BRM88_08110 IPR029118 Putative toxin 44 BRM88_08110 IPR031325 BRM88_08110 BRM88_08115 IPR002559 Transposase, IS4-like BRM88_08115 IPR008490 Transposase InsH, N-terminal BRM88_08130 IPR002559 Transposase, IS4-like BRM88_08130 IPR008490 Transposase InsH, N-terminal BRM88_08150 IPR012337 Ribonuclease H-like domain BRM88_08150 IPR025246 Transposase IS30-like HTH domain BRM88_08155 IPR029118 Putative toxin 44 BRM88_08165 IPR012337 Ribonuclease H-like domain BRM88_08165 IPR038721 BRM88_08165 BRM88_08170 IPR001977 Dephospho-CoA kinase BRM88_08170 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_08175 IPR000045 Prepilin type IV endopeptidase, peptidase domain BRM88_08175 IPR010627 Peptidase A24A, N-terminal BRM88_08175 IPR014032 Peptidase A24A, prepilin type IV, bacterial BRM88_08180 IPR001992 Type II secretion system conserved site BRM88_08180 IPR003004 GspF/PilC family BRM88_08180 IPR018076 Type II secretion system F domain BRM88_08185 IPR001082 Fimbrial protein pilin BRM88_08185 IPR012902 Prokaryotic N-terminal methylation site BRM88_08190 IPR000917 Sulfatase BRM88_08190 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha BRM88_08190 IPR017850 Alkaline-phosphatase-like, core domain BRM88_08200 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_08205 IPR001482 Type II secretion system protein E BRM88_08205 IPR007831 General secretory system II, protein E, N-terminal BRM88_08205 IPR013374 ATPase, type IV, pilus assembly, PilB BRM88_08205 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_08205 IPR037257 BRM88_08205 BRM88_08220 IPR001789 Signal transduction response regulator, receiver domain BRM88_08220 IPR002078 RNA polymerase sigma factor 54 interaction domain BRM88_08220 IPR002197 DNA binding HTH domain, Fis-type BRM88_08220 IPR003593 AAA+ ATPase domain BRM88_08220 IPR009057 Homeodomain-like BRM88_08220 IPR011006 CheY-like superfamily BRM88_08220 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BRM88_08220 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BRM88_08220 IPR025944 Sigma-54 interaction domain, conserved site BRM88_08220 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_08225 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_08225 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_08225 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_08225 IPR036097 BRM88_08225 BRM88_08225 IPR036890 BRM88_08225 BRM88_08230 IPR005809 Succinyl-CoA synthetase, beta subunit BRM88_08230 IPR005811 ATP-citrate lyase/succinyl-CoA ligase BRM88_08230 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type BRM88_08230 IPR013815 ATP-grasp fold, subdomain 1 BRM88_08230 IPR016102 Succinyl-CoA synthetase-like BRM88_08230 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site BRM88_08235 IPR003781 CoA-binding BRM88_08235 IPR005810 Succinyl-CoA ligase, alpha subunit BRM88_08235 IPR005811 ATP-citrate lyase/succinyl-CoA ligase BRM88_08235 IPR016102 Succinyl-CoA synthetase-like BRM88_08235 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site BRM88_08235 IPR033847 BRM88_08235 BRM88_08235 IPR036291 BRM88_08235 BRM88_08250 IPR003010 Carbon-nitrogen hydrolase BRM88_08250 IPR003694 NAD(+) synthetase BRM88_08250 IPR014445 Glutamine-dependent NAD(+) synthetase BRM88_08250 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_08250 IPR022310 NAD/GMP synthase BRM88_08250 IPR036526 BRM88_08250 BRM88_08255 IPR011990 Tetratricopeptide-like helical domain BRM88_08255 IPR017689 Outer membrane protein assembly factor BamD BRM88_08255 IPR039565 BRM88_08255 BRM88_08260 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F BRM88_08260 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site BRM88_08260 IPR006225 Pseudouridine synthase, RluC/RluD BRM88_08260 IPR020103 Pseudouridine synthase, catalytic domain BRM88_08260 IPR036986 BRM88_08260 BRM88_08265 IPR003730 Multi-copper polyphenol oxidoreductase, laccase BRM88_08265 IPR011324 Cytotoxic necrotizing factor-like, catalytic BRM88_08265 IPR038371 BRM88_08265 BRM88_08270 IPR025311 Domain of unknown function DUF4166 BRM88_08275 IPR007263 Protein of unknown function DUF393 BRM88_08280 IPR001830 Glycosyl transferase, family 20 BRM88_08280 IPR012766 Alpha,alpha-trehalose-phosphate synthase BRM88_08285 IPR008928 Six-hairpin glycosidase-like BRM88_08285 IPR011613 Glycoside hydrolase family 15 BRM88_08285 IPR012341 Six-hairpin glycosidase BRM88_08290 IPR003337 Trehalose-phosphatase BRM88_08290 IPR006379 HAD-superfamily hydrolase, subfamily IIB BRM88_08290 IPR023214 HAD-like domain BRM88_08290 IPR036412 BRM88_08290 BRM88_08300 IPR000531 TonB-dependent receptor, beta-barrel BRM88_08300 IPR010916 TonB box, conserved site BRM88_08300 IPR012910 TonB-dependent receptor, plug BRM88_08300 IPR036942 BRM88_08300 BRM88_08300 IPR037066 BRM88_08300 BRM88_08305 IPR021957 Protein of unknown function DUF3574 BRM88_08310 IPR027839 Protein of unknown function DUF4432 BRM88_08325 IPR005135 Endonuclease/exonuclease/phosphatase BRM88_08325 IPR036691 BRM88_08325 BRM88_08330 IPR007471 Arginine-tRNA-protein transferase, N-terminal BRM88_08330 IPR007472 Arginine-tRNA-protein transferase, C-terminal BRM88_08330 IPR016181 Acyl-CoA N-acyltransferase BRM88_08330 IPR017138 Arginine-tRNA-protein transferase, predicted, prokaryotic BRM88_08335 IPR002048 EF-hand domain BRM88_08335 IPR011992 EF-hand domain pair BRM88_08335 IPR018247 EF-Hand 1, calcium-binding site BRM88_08350 IPR007627 RNA polymerase sigma-70 region 2 BRM88_08350 IPR013325 RNA polymerase sigma factor, region 2 BRM88_08360 IPR003703 Acyl-CoA thioesterase BRM88_08360 IPR029069 HotDog domain BRM88_08365 IPR001753 Crotonase superfamily BRM88_08365 IPR029045 ClpP/crotonase-like domain BRM88_08370 IPR007410 DR1885-like metal-binding protein BRM88_08370 IPR036182 BRM88_08370 BRM88_08375 IPR029069 HotDog domain BRM88_08380 IPR004602 UvrABC system subunit A BRM88_08380 IPR017871 ABC transporter, conserved site BRM88_08380 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_08385 IPR001787 Ribosomal protein L21 BRM88_08385 IPR018258 Ribosomal protein L21, conserved site BRM88_08385 IPR028909 Ribosomal protein L21-like BRM88_08385 IPR036164 BRM88_08385 BRM88_08390 IPR001684 Ribosomal protein L27 BRM88_08390 IPR018261 Ribosomal protein L27, conserved site BRM88_08395 IPR006073 GTP binding domain BRM88_08395 IPR006074 GTP1/OBG, conserved site BRM88_08395 IPR006169 GTP1/OBG domain BRM88_08395 IPR014100 GTP-binding protein Obg/CgtA BRM88_08395 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_08395 IPR035101 BRM88_08395 BRM88_08395 IPR036726 BRM88_08395 BRM88_08400 IPR002583 Ribosomal protein S20 BRM88_08400 IPR036510 BRM88_08400 BRM88_08405 IPR004268 Flagellin assembly, membrane protein MviN BRM88_08410 IPR002606 Riboflavin kinase, bacterial BRM88_08410 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_08410 IPR015864 FAD synthetase BRM88_08410 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic BRM88_08410 IPR023465 Riboflavin kinase domain BRM88_08415 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BRM88_08415 IPR002300 Aminoacyl-tRNA synthetase, class Ia BRM88_08415 IPR002301 Isoleucine-tRNA ligase BRM88_08415 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain BRM88_08415 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding BRM88_08415 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase BRM88_08415 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding BRM88_08415 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_08415 IPR023585 Isoleucine-tRNA ligase, type 1 BRM88_08420 IPR001872 Peptidase A8, signal peptidase II BRM88_08425 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase BRM88_08435 IPR002429 Cytochrome c oxidase subunit II C-terminal BRM88_08435 IPR006333 Cytochrome o ubiquinol oxidase subunit II BRM88_08435 IPR008972 Cupredoxin BRM88_08435 IPR010514 COX aromatic rich motif BRM88_08435 IPR036257 BRM88_08435 BRM88_08440 IPR000883 Cytochrome c oxidase subunit I BRM88_08440 IPR014207 Cytochrome o ubiquinol oxidase, subunit I BRM88_08440 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site BRM88_08440 IPR036927 BRM88_08440 BRM88_08445 IPR000298 Cytochrome c oxidase subunit III domain BRM88_08445 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle BRM88_08445 IPR014206 Cytochrome o ubiquinol oxidase, subunit III BRM88_08445 IPR035973 BRM88_08445 BRM88_08450 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes BRM88_08450 IPR014210 Cytochrome o ubiquinol oxidase subunit IV BRM88_08455 IPR001478 PDZ domain BRM88_08455 IPR007963 Peptidase M61, catalytic domain BRM88_08455 IPR011716 Tetratricopeptide TPR-3 BRM88_08455 IPR024191 Peptidase M61 BRM88_08455 IPR036034 BRM88_08455 BRM88_08460 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein BRM88_08460 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset BRM88_08460 IPR037026 BRM88_08460 BRM88_08465 IPR011990 Tetratricopeptide-like helical domain BRM88_08470 IPR006530 YD repeat BRM88_08470 IPR022385 Rhs repeat-associated core BRM88_08470 IPR031325 BRM88_08470 BRM88_08470 IPR032722 BRM88_08470 BRM88_08475 IPR025851 SUKH-4 immunity protein BRM88_08500 IPR000432 DNA mismatch repair protein MutS, C-terminal BRM88_08500 IPR005748 DNA mismatch repair protein MutS, type 1 BRM88_08500 IPR007695 DNA mismatch repair protein MutS-like, N-terminal BRM88_08500 IPR007696 DNA mismatch repair protein MutS, core BRM88_08500 IPR007860 DNA mismatch repair protein MutS, connector domain BRM88_08500 IPR007861 DNA mismatch repair protein MutS, clamp BRM88_08500 IPR016151 DNA mismatch repair protein MutS, N-terminal BRM88_08500 IPR017261 DNA mismatch repair protein Msh6 BRM88_08500 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_08500 IPR036187 BRM88_08500 BRM88_08500 IPR036678 BRM88_08500 BRM88_08525 IPR003593 AAA+ ATPase domain BRM88_08525 IPR004504 DNA repair protein RadA BRM88_08525 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BRM88_08525 IPR020568 Ribosomal protein S5 domain 2-type fold BRM88_08525 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_08540 IPR038731 BRM88_08540 BRM88_08550 IPR011701 Major facilitator superfamily BRM88_08550 IPR036259 BRM88_08550 BRM88_08555 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain BRM88_08560 IPR021381 Protein of unknown function DUF3011 BRM88_08565 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb BRM88_08565 IPR004115 GAD-like domain BRM88_08565 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) BRM88_08565 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BRM88_08565 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type BRM88_08565 IPR012340 Nucleic acid-binding, OB-fold BRM88_08565 IPR029351 GAD domain BRM88_08570 IPR000182 GNAT domain BRM88_08570 IPR016181 Acyl-CoA N-acyltransferase BRM88_08575 IPR010427 Protein of unknown function DUF1023 BRM88_08575 IPR029058 Alpha/Beta hydrolase fold BRM88_08580 IPR002876 Transcriptional regulator TACO1-like BRM88_08580 IPR017856 Integrase, N-terminal zinc-binding domain-like BRM88_08580 IPR026564 Transcriptional regulator TACO1-like, domain 3 BRM88_08580 IPR029072 YebC-like BRM88_08585 IPR002176 Crossover junction endodeoxyribonuclease RuvC BRM88_08585 IPR012337 Ribonuclease H-like domain BRM88_08585 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site BRM88_08585 IPR036397 BRM88_08585 BRM88_08590 IPR000085 Bacterial DNA recombination protein RuvA BRM88_08590 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 BRM88_08590 IPR010994 RuvA domain 2-like BRM88_08590 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal BRM88_08590 IPR012340 Nucleic acid-binding, OB-fold BRM88_08590 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial BRM88_08590 IPR036267 BRM88_08590 BRM88_08595 IPR003855 K+ potassium transporter BRM88_08595 IPR023051 Potassium uptake protein, low affinity, Kup BRM88_08600 IPR003593 AAA+ ATPase domain BRM88_08600 IPR004605 DNA helicase, Holliday junction RuvB type BRM88_08600 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal BRM88_08600 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal BRM88_08600 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_08600 IPR036388 BRM88_08600 BRM88_08600 IPR036390 BRM88_08600 BRM88_08605 IPR006683 Thioesterase superfamily BRM88_08605 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family BRM88_08605 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site BRM88_08605 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase BRM88_08605 IPR029069 HotDog domain BRM88_08610 IPR002898 MotA/TolQ/ExbB proton channel BRM88_08610 IPR014163 Tol-Pal system, TolQ BRM88_08615 IPR003400 Biopolymer transport protein ExbD/TolR BRM88_08615 IPR014168 Biopolymer transport, TolR BRM88_08620 IPR014161 Tol-Pal system, TolA BRM88_08625 IPR007195 TolB, N-terminal BRM88_08625 IPR011042 Six-bladed beta-propeller, TolB-like BRM88_08625 IPR011659 WD40-like Beta Propeller BRM88_08625 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB BRM88_08625 IPR036752 BRM88_08625 BRM88_08630 IPR006664 Outer membrane protein, bacterial BRM88_08630 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal BRM88_08630 IPR014169 Peptidoglycan-associated lipoprotein BRM88_08630 IPR036737 BRM88_08630 BRM88_08630 IPR039001 BRM88_08630 BRM88_08635 IPR011990 Tetratricopeptide-like helical domain BRM88_08635 IPR014162 Tol-Pal system, YbgF BRM88_08635 IPR032519 BRM88_08635 BRM88_08635 IPR034706 BRM88_08635 BRM88_08635 IPR039565 BRM88_08635 BRM88_08640 IPR007197 Radical SAM BRM88_08640 IPR013785 Aldolase-type TIM barrel BRM88_08640 IPR024924 7-carboxy-7-deazaguanine synthase-like BRM88_08640 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE BRM88_08650 IPR002942 RNA-binding S4 domain BRM88_08650 IPR020103 Pseudouridine synthase, catalytic domain BRM88_08650 IPR036986 BRM88_08650 BRM88_08670 IPR001123 Lysine-type exporter protein (LYSE/YGGA) BRM88_08690 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 BRM88_08690 IPR032877 BRM88_08690 BRM88_08700 IPR002559 Transposase, IS4-like BRM88_08700 IPR008490 Transposase InsH, N-terminal BRM88_08710 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_08710 IPR018317 Queuosine biosynthesis protein QueC BRM88_08720 IPR010998 Integrase, Lambda-type, N-terminal BRM88_08720 IPR011010 DNA breaking-rejoining enzyme, catalytic core BRM88_08720 IPR013762 Integrase-like, catalytic core BRM88_08745 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_08765 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_08780 IPR007684 Zinc finger, Ogr/Delta-type BRM88_08780 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain BRM88_08785 IPR010982 Lambda repressor-like, DNA-binding domain BRM88_08785 IPR026365 Phage-associated protein, BcepMu gp16 family BRM88_08790 IPR001387 Cro/C1-type helix-turn-helix domain BRM88_08790 IPR010982 Lambda repressor-like, DNA-binding domain BRM88_08800 IPR009734 Myoviridae, GpU BRM88_08800 IPR016912 Bacteriophage P2, GpU BRM88_08805 IPR010090 Phage tail tape measure protein BRM88_08810 IPR009493 Burkholderia phage phiE202, Gp27 BRM88_08815 IPR019289 Bacteriophage tail protein Gp41, putative BRM88_08820 IPR006498 Bacteriophage P2, FII, major tail tube protein BRM88_08825 IPR020287 Tail sheath protein, C-terminal domain BRM88_08825 IPR035089 BRM88_08825 BRM88_08830 IPR007048 GpW/Gp25/anti-adapter protein IraD BRM88_08835 IPR006531 Gp5 N-terminal BRM88_08835 IPR013046 Bacteriophage Mu/P2, baseplate assembly BRM88_08835 IPR037026 BRM88_08835 BRM88_08845 IPR011083 Phage tail collar domain BRM88_08845 IPR037053 BRM88_08845 BRM88_08850 IPR006521 Tail protein I BRM88_08855 IPR006949 Baseplate assembly protein J-like, predicted BRM88_08855 IPR014507 Baseplate assembly protein J, predicted BRM88_08865 IPR006522 Phage virion morphogensis protein BRM88_08870 IPR009678 Bacteriophage tail completion protein R BRM88_08880 IPR023346 Lysozyme-like domain BRM88_08885 IPR008473 Bacteriophage D3, Orf90 BRM88_08890 IPR032637 BRM88_08890 BRM88_08895 IPR008861 Bacteriophage P2, GpX BRM88_08895 IPR036779 BRM88_08895 BRM88_08900 IPR009225 Bacteriophage head completion protein GpL BRM88_08905 IPR010270 Bacteriophage P2, GpM BRM88_08910 IPR006441 Bacteriophage P2, GpN, major capsid BRM88_08915 IPR009228 Capsid scaffolding protein GpO BRM88_08920 IPR004921 Terminase, large subunit BRM88_08920 IPR010332 ATPase terminase subunit, putative BRM88_08920 IPR035421 BRM88_08920 BRM88_08925 IPR006430 Phage portal protein, PBSX family BRM88_08925 IPR006944 Bacteriophage/Gene transfer agent portal protein BRM88_08925 IPR030935 BRM88_08925 BRM88_08930 IPR019294 Translational regulator Com BRM88_08935 IPR001091 Restriction/modification DNA-methylase BRM88_08935 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BRM88_08935 IPR002941 DNA methylase N-4/N-6 BRM88_08935 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_08940 IPR028969 Immunity protein 32 BRM88_08945 IPR028904 Tox-REase-5 domain BRM88_08955 IPR025391 Domain of unknown function DUF4123 BRM88_08960 IPR008727 PAAR motif BRM88_08965 IPR001126 DNA-repair protein, UmuC-like BRM88_08965 IPR017961 DNA polymerase, Y-family, little finger domain BRM88_08965 IPR025188 Domain of unknown function DUF4113 BRM88_08985 IPR001789 Signal transduction response regulator, receiver domain BRM88_08985 IPR011006 CheY-like superfamily BRM88_08995 IPR001650 Helicase, C-terminal BRM88_08995 IPR002121 HRDC domain BRM88_08995 IPR004589 DNA helicase, ATP-dependent, RecQ type BRM88_08995 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial BRM88_08995 IPR010997 HRDC-like BRM88_08995 IPR011545 DEAD/DEAH box helicase domain BRM88_08995 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BRM88_08995 IPR018982 RQC domain BRM88_08995 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_08995 IPR032284 BRM88_08995 BRM88_08995 IPR036388 BRM88_08995 BRM88_09005 IPR002177 DNA-binding protein Dps BRM88_09005 IPR008331 Ferritin/DPS protein domain BRM88_09005 IPR009078 Ferritin-like superfamily BRM88_09005 IPR012347 Ferritin-related BRM88_09005 IPR023188 DNA-binding protein Dps, conserved site BRM88_09010 IPR001650 Helicase, C-terminal BRM88_09010 IPR003593 AAA+ ATPase domain BRM88_09010 IPR007502 Helicase-associated domain BRM88_09010 IPR010222 RNA helicase, ATP-dependent DEAH box, HrpA-type BRM88_09010 IPR011545 DEAD/DEAH box helicase domain BRM88_09010 IPR011709 Domain of unknown function DUF1605 BRM88_09010 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BRM88_09010 IPR024590 RNA helicase, ATP-dependent DEAH box, HrpA, C-terminal BRM88_09010 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_09015 IPR000531 TonB-dependent receptor, beta-barrel BRM88_09015 IPR010104 Bacterial TonB-dependent receptor BRM88_09015 IPR012910 TonB-dependent receptor, plug BRM88_09015 IPR036942 BRM88_09015 BRM88_09015 IPR037066 BRM88_09015 BRM88_09025 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type BRM88_09025 IPR029058 Alpha/Beta hydrolase fold BRM88_09040 IPR007197 Radical SAM BRM88_09040 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria BRM88_09040 IPR013785 Aldolase-type TIM barrel BRM88_09040 IPR017200 Radical SAM coenzyme PQQ biosynthesis protein E/heme D1 biosynthesis NirJ BRM88_09040 IPR023885 4Fe4S-binding SPASM domain BRM88_09045 IPR008792 Coenzyme PQQ synthesis D BRM88_09045 IPR022479 Coenzyme PQQ synthesis D, bacteria BRM88_09050 IPR004305 Thiaminase-2/PQQC BRM88_09050 IPR011845 Coenzyme PQQ biosynthesis protein C BRM88_09050 IPR016084 Haem oxygenase-like, multi-helical BRM88_09055 IPR001279 Beta-lactamase-like BRM88_09055 IPR011842 Coenzyme PQQ biosynthesis protein B BRM88_09055 IPR036866 BRM88_09055 BRM88_09060 IPR011725 Coenzyme PQQ biosynthesis protein A BRM88_09065 IPR002912 ACT domain BRM88_09065 IPR003607 HD/PDEase domain BRM88_09065 IPR004095 TGS BRM88_09065 IPR004811 RelA/SpoT family BRM88_09065 IPR007685 RelA/SpoT BRM88_09065 IPR012675 Beta-grasp domain BRM88_09065 IPR012676 TGS-like BRM88_09070 IPR011990 Tetratricopeptide-like helical domain BRM88_09075 IPR001173 Glycosyltransferase 2-like BRM88_09075 IPR029044 Nucleotide-diphospho-sugar transferases BRM88_09080 IPR001264 Glycosyl transferase, family 51 BRM88_09080 IPR001460 Penicillin-binding protein, transpeptidase BRM88_09080 IPR011813 Penicillin-binding protein 1B BRM88_09080 IPR012338 Beta-lactamase/transpeptidase-like BRM88_09080 IPR023346 Lysozyme-like domain BRM88_09080 IPR028166 Bifunctional transglycosylase second domain BRM88_09080 IPR036950 BRM88_09080 BRM88_09085 IPR011990 Tetratricopeptide-like helical domain BRM88_09090 IPR006555 ATP-dependent helicase, C-terminal BRM88_09090 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_09095 IPR000905 Gcp-like domain BRM88_09095 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ BRM88_09100 IPR005502 ADP-ribosylation/Crystallin J1 BRM88_09100 IPR036705 BRM88_09100 BRM88_09105 IPR006260 TonB, C-terminal BRM88_09105 IPR037682 BRM88_09105 BRM88_09110 IPR004215 Prokaryotic glutathione synthetase, N-terminal BRM88_09110 IPR004218 Prokaryotic glutathione synthetase, ATP-binding BRM88_09110 IPR006284 Glutathione synthetase, prokaryotic BRM88_09110 IPR013815 ATP-grasp fold, subdomain 1 BRM88_09110 IPR016185 Pre-ATP-grasp domain BRM88_09115 IPR001789 Signal transduction response regulator, receiver domain BRM88_09115 IPR011006 CheY-like superfamily BRM88_09120 IPR001789 Signal transduction response regulator, receiver domain BRM88_09120 IPR011006 CheY-like superfamily BRM88_09125 IPR002545 CheW-like protein BRM88_09125 IPR036061 BRM88_09125 BRM88_09130 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BRM88_09130 IPR004090 Chemotaxis methyl-accepting receptor BRM88_09135 IPR001789 Signal transduction response regulator, receiver domain BRM88_09135 IPR002545 CheW-like protein BRM88_09135 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_09135 IPR004105 Histidine kinase CheA-like, homodimeric domain BRM88_09135 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_09135 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BRM88_09135 IPR011006 CheY-like superfamily BRM88_09135 IPR036061 BRM88_09135 BRM88_09135 IPR036641 BRM88_09135 BRM88_09135 IPR036890 BRM88_09135 BRM88_09140 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase BRM88_09140 IPR012071 Chemotaxis glutamate methyltransferase BRM88_09140 IPR035909 BRM88_09140 BRM88_09145 IPR002545 CheW-like protein BRM88_09145 IPR036061 BRM88_09145 BRM88_09150 IPR000182 GNAT domain BRM88_09150 IPR016181 Acyl-CoA N-acyltransferase BRM88_09155 IPR009057 Homeodomain-like BRM88_09155 IPR012337 Ribonuclease H-like domain BRM88_09155 IPR038717 BRM88_09155 BRM88_09180 IPR000246 Peptidase T2, asparaginase 2 BRM88_09180 IPR029055 Nucleophile aminohydrolases, N-terminal BRM88_09185 IPR005627 Copper homeostasis protein CutC BRM88_09185 IPR023648 Copper homeostasis CutC domain BRM88_09185 IPR036822 BRM88_09185 BRM88_09190 IPR001611 Leucine-rich repeat BRM88_09190 IPR003591 Leucine-rich repeat, typical subtype BRM88_09190 IPR032675 BRM88_09190 BRM88_09195 IPR011040 Sialidases BRM88_09195 IPR036278 BRM88_09195 BRM88_09210 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 BRM88_09210 IPR032877 BRM88_09210 BRM88_09230 IPR001944 Glycoside hydrolase, family 35 BRM88_09230 IPR008979 Galactose-binding domain-like BRM88_09230 IPR017853 Glycoside hydrolase, superfamily BRM88_09230 IPR019801 Glycoside hydrolase, family 35, conserved site BRM88_09230 IPR026283 Beta-galactosidase 1-like BRM88_09230 IPR031330 BRM88_09230 BRM88_09240 IPR005887 Alpha-1,2-mannosidase, putative BRM88_09240 IPR008928 Six-hairpin glycosidase-like BRM88_09240 IPR012939 Glycosyl hydrolase family 92 BRM88_09240 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup BRM88_09245 IPR008313 Uncharacterised conserved protein UCP028846 BRM88_09245 IPR008928 Six-hairpin glycosidase-like BRM88_09245 IPR012341 Six-hairpin glycosidase BRM88_09255 IPR011053 Single hybrid motif BRM88_09255 IPR039562 BRM88_09255 BRM88_09275 IPR003997 RTX secretion protein D, Gram-negative bacteria BRM88_09305 IPR003439 ABC transporter-like BRM88_09305 IPR003593 AAA+ ATPase domain BRM88_09305 IPR005074 Peptidase C39, bacteriocin processing BRM88_09305 IPR011527 ABC transporter type 1, transmembrane domain BRM88_09305 IPR017871 ABC transporter, conserved site BRM88_09305 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_09305 IPR036640 BRM88_09305 BRM88_09310 IPR001764 Glycoside hydrolase, family 3, N-terminal BRM88_09310 IPR002772 Glycoside hydrolase family 3 C-terminal domain BRM88_09310 IPR011658 PA14 BRM88_09310 IPR013783 Immunoglobulin-like fold BRM88_09310 IPR017853 Glycoside hydrolase, superfamily BRM88_09310 IPR026891 Fibronectin type III-like domain BRM88_09310 IPR036881 BRM88_09310 BRM88_09310 IPR036962 BRM88_09310 BRM88_09315 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich BRM88_09315 IPR006103 Glycoside hydrolase, family 2, TIM barrel BRM88_09315 IPR013783 Immunoglobulin-like fold BRM88_09315 IPR017853 Glycoside hydrolase, superfamily BRM88_09315 IPR036156 BRM88_09315 BRM88_09330 IPR001223 Glycoside hydrolase, family 18, catalytic domain BRM88_09330 IPR011583 Chitinase II BRM88_09330 IPR017853 Glycoside hydrolase, superfamily BRM88_09330 IPR029070 Chitinase insertion domain BRM88_09335 IPR000933 Glycoside hydrolase, family 29 BRM88_09335 IPR013780 Glycosyl hydrolase, family 13, all-beta BRM88_09335 IPR016286 Alpha-L-fucosidase, metazoa-type BRM88_09335 IPR017853 Glycoside hydrolase, superfamily BRM88_09335 IPR031919 BRM88_09335 BRM88_09340 IPR000531 TonB-dependent receptor, beta-barrel BRM88_09340 IPR010104 Bacterial TonB-dependent receptor BRM88_09340 IPR012910 TonB-dependent receptor, plug BRM88_09340 IPR036942 BRM88_09340 BRM88_09340 IPR037066 BRM88_09340 BRM88_09345 IPR003836 Glucokinase BRM88_09350 IPR006700 Ribosomal RNA small subunit methyltransferase E BRM88_09350 IPR015947 PUA-like domain BRM88_09350 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BRM88_09350 IPR029028 Alpha/beta knot methyltransferases BRM88_09355 IPR005814 Aminotransferase class-III BRM88_09355 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA BRM88_09355 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BRM88_09355 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BRM88_09355 IPR015424 Pyridoxal phosphate-dependent transferase BRM88_09360 IPR000086 NUDIX hydrolase domain BRM88_09360 IPR015797 NUDIX hydrolase domain-like BRM88_09360 IPR020084 NUDIX hydrolase, conserved site BRM88_09365 IPR000760 Inositol monophosphatase BRM88_09365 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial BRM88_09365 IPR020550 Inositol monophosphatase, conserved site BRM88_09365 IPR020583 Inositol monophosphatase, metal-binding site BRM88_09370 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core BRM88_09370 IPR011551 NTP pyrophosphohydrolase MazG, bacterial BRM88_09385 IPR001107 Band 7 protein BRM88_09385 IPR001972 Stomatin family BRM88_09385 IPR018080 Band 7/stomatin-like, conserved site BRM88_09385 IPR032435 BRM88_09385 BRM88_09385 IPR036013 BRM88_09385 BRM88_09390 IPR002810 NfeD-like, C-terminal domain BRM88_09395 IPR006222 Glycine cleavage T-protein, N-terminal BRM88_09395 IPR006223 Glycine cleavage system T protein BRM88_09395 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain BRM88_09395 IPR022903 Glycine cleavage system T protein, bacteria BRM88_09395 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 BRM88_09395 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA BRM88_09395 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain BRM88_09400 IPR002930 Glycine cleavage system H-protein BRM88_09400 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site BRM88_09400 IPR011053 Single hybrid motif BRM88_09400 IPR017453 Glycine cleavage system H-protein, subgroup BRM88_09400 IPR033753 BRM88_09400 BRM88_09420 IPR001466 Beta-lactamase-related BRM88_09420 IPR012338 Beta-lactamase/transpeptidase-like BRM88_09430 IPR009732 Protein of unknown function DUF1304 BRM88_09435 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal BRM88_09435 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain BRM88_09435 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal BRM88_09435 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type BRM88_09435 IPR036250 BRM88_09435 BRM88_09435 IPR037069 BRM88_09435 BRM88_09440 IPR022742 Putative lysophospholipase BRM88_09440 IPR029058 Alpha/Beta hydrolase fold BRM88_09445 IPR001647 DNA-binding HTH domain, TetR-type BRM88_09445 IPR009057 Homeodomain-like BRM88_09445 IPR036271 BRM88_09445 BRM88_09450 IPR000531 TonB-dependent receptor, beta-barrel BRM88_09450 IPR010917 TonB-dependent receptor, conserved site BRM88_09450 IPR012910 TonB-dependent receptor, plug BRM88_09450 IPR037066 BRM88_09450 BRM88_09460 IPR000397 Heat shock protein Hsp33 BRM88_09460 IPR016153 Heat shock protein Hsp33, N-terminal BRM88_09460 IPR016154 Heat shock protein Hsp33, C-terminal BRM88_09460 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain BRM88_09465 IPR001264 Glycosyl transferase, family 51 BRM88_09465 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase BRM88_09465 IPR023346 Lysozyme-like domain BRM88_09465 IPR036950 BRM88_09465 BRM88_09470 IPR001173 Glycosyltransferase 2-like BRM88_09470 IPR029044 Nucleotide-diphospho-sugar transferases BRM88_09480 IPR007844 AsmA BRM88_09490 IPR004254 Hly-III-related BRM88_09490 IPR005744 HylII BRM88_09495 IPR000795 Elongation factor, GTP-binding domain BRM88_09495 IPR004548 Peptide chain release factor 3 BRM88_09495 IPR005225 Small GTP-binding protein domain BRM88_09495 IPR009000 Translation protein, beta-barrel domain BRM88_09495 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_09495 IPR031157 BRM88_09495 BRM88_09495 IPR032090 BRM88_09495 BRM88_09495 IPR035647 BRM88_09495 BRM88_09495 IPR038467 BRM88_09495 BRM88_09500 IPR011055 Duplicated hybrid motif BRM88_09500 IPR016047 Peptidase M23 BRM88_09505 IPR000073 Alpha/beta hydrolase fold-1 BRM88_09505 IPR008220 Homoserine acetyltransferase BRM88_09505 IPR029058 Alpha/Beta hydrolase fold BRM88_09510 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme BRM88_09510 IPR011821 O-succinylhomoserine (thiol)-lyase BRM88_09510 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BRM88_09510 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BRM88_09510 IPR015424 Pyridoxal phosphate-dependent transferase BRM88_09520 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form BRM88_09520 IPR005130 Serine dehydratase-like, alpha subunit BRM88_09520 IPR005131 Serine dehydratase beta chain BRM88_09520 IPR029009 Allosteric substrate binding domain BRM88_09525 IPR008554 Glutaredoxin-like BRM88_09525 IPR036249 BRM88_09525 BRM88_09530 IPR008613 Excalibur calcium-binding domain BRM88_09535 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BRM88_09535 IPR036761 BRM88_09535 BRM88_09540 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase BRM88_09540 IPR016174 Di-haem cytochrome, transmembrane BRM88_09545 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BRM88_09545 IPR036761 BRM88_09545 BRM88_09550 IPR001789 Signal transduction response regulator, receiver domain BRM88_09550 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_09550 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_09550 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_09550 IPR011006 CheY-like superfamily BRM88_09550 IPR011110 Two component regulator propeller BRM88_09550 IPR011123 Two component regulator three Y BRM88_09550 IPR013783 Immunoglobulin-like fold BRM88_09550 IPR015943 WD40/YVTN repeat-like-containing domain BRM88_09550 IPR036097 BRM88_09550 BRM88_09550 IPR036890 BRM88_09550 BRM88_09555 IPR001789 Signal transduction response regulator, receiver domain BRM88_09555 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_09555 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_09555 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_09555 IPR011006 CheY-like superfamily BRM88_09555 IPR011110 Two component regulator propeller BRM88_09555 IPR011123 Two component regulator three Y BRM88_09555 IPR013783 Immunoglobulin-like fold BRM88_09555 IPR015943 WD40/YVTN repeat-like-containing domain BRM88_09555 IPR036097 BRM88_09555 BRM88_09555 IPR036890 BRM88_09555 BRM88_09560 IPR001789 Signal transduction response regulator, receiver domain BRM88_09560 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_09560 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_09560 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_09560 IPR011006 CheY-like superfamily BRM88_09560 IPR011110 Two component regulator propeller BRM88_09560 IPR011123 Two component regulator three Y BRM88_09560 IPR013783 Immunoglobulin-like fold BRM88_09560 IPR015943 WD40/YVTN repeat-like-containing domain BRM88_09560 IPR036097 BRM88_09560 BRM88_09560 IPR036890 BRM88_09560 BRM88_09580 IPR000421 Coagulation factor 5/8 C-terminal type domain BRM88_09580 IPR000933 Glycoside hydrolase, family 29 BRM88_09580 IPR008979 Galactose-binding domain-like BRM88_09580 IPR017853 Glycoside hydrolase, superfamily BRM88_09595 IPR006103 Glycoside hydrolase, family 2, TIM barrel BRM88_09595 IPR011683 Glycosyl hydrolase family 53 BRM88_09595 IPR017853 Glycoside hydrolase, superfamily BRM88_09605 IPR001387 Cro/C1-type helix-turn-helix domain BRM88_09605 IPR010359 Protein of unknown function DUF955 BRM88_09605 IPR010982 Lambda repressor-like, DNA-binding domain BRM88_09605 IPR018653 Domain of unknown function DUF2083,transcriptional regulator BRM88_09605 IPR026281 HTH type transcriptional regulator Rv0465c/Mt0481 BRM88_09610 IPR010061 Methylmalonate-semialdehyde dehydrogenase BRM88_09610 IPR015590 Aldehyde dehydrogenase domain BRM88_09610 IPR016160 Aldehyde dehydrogenase, cysteine active site BRM88_09610 IPR016161 Aldehyde/histidinol dehydrogenase BRM88_09610 IPR016162 Aldehyde dehydrogenase, N-terminal BRM88_09610 IPR016163 Aldehyde dehydrogenase, C-terminal BRM88_09615 IPR006089 Acyl-CoA dehydrogenase, conserved site BRM88_09615 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain BRM88_09615 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal BRM88_09615 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain BRM88_09615 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal BRM88_09615 IPR036250 BRM88_09615 BRM88_09615 IPR037069 BRM88_09615 BRM88_09620 IPR001753 Crotonase superfamily BRM88_09620 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site BRM88_09620 IPR029045 ClpP/crotonase-like domain BRM88_09625 IPR029045 ClpP/crotonase-like domain BRM88_09625 IPR032259 BRM88_09625 BRM88_09630 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site BRM88_09630 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding BRM88_09630 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like BRM88_09630 IPR011548 3-hydroxyisobutyrate dehydrogenase BRM88_09630 IPR013328 Dehydrogenase, multihelical BRM88_09630 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type BRM88_09630 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain BRM88_09630 IPR036291 BRM88_09630 BRM88_09635 IPR002524 Cation efflux protein BRM88_09635 IPR027469 Cation efflux protein transmembrane domain BRM88_09635 IPR036837 BRM88_09635 BRM88_09640 IPR001753 Crotonase superfamily BRM88_09640 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal BRM88_09640 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding BRM88_09640 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like BRM88_09640 IPR029045 ClpP/crotonase-like domain BRM88_09640 IPR036291 BRM88_09640 BRM88_09645 IPR007627 RNA polymerase sigma-70 region 2 BRM88_09645 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BRM88_09645 IPR013324 RNA polymerase sigma factor, region 3/4 BRM88_09645 IPR013325 RNA polymerase sigma factor, region 2 BRM88_09645 IPR014284 RNA polymerase sigma-70 like domain BRM88_09645 IPR014286 RNA polymerase sigma-70 RpoE type BRM88_09645 IPR036388 BRM88_09645 BRM88_09650 IPR005572 Anti sigma-E protein RseA, N-terminal BRM88_09650 IPR036147 BRM88_09650 BRM88_09655 IPR001478 PDZ domain BRM88_09655 IPR001940 Peptidase S1C BRM88_09655 IPR009003 Trypsin-like cysteine/serine peptidase domain BRM88_09655 IPR011782 Peptidase S1C, Do BRM88_09655 IPR036034 BRM88_09655 BRM88_09660 IPR000640 Translation elongation factor EFG, V domain BRM88_09660 IPR000795 Elongation factor, GTP-binding domain BRM88_09660 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 BRM88_09660 IPR005225 Small GTP-binding protein domain BRM88_09660 IPR006297 Elongation factor 4 BRM88_09660 IPR013842 GTP-binding protein LepA, C-terminal BRM88_09660 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_09660 IPR031157 BRM88_09660 BRM88_09660 IPR035647 BRM88_09660 BRM88_09660 IPR038363 BRM88_09660 BRM88_09665 IPR000223 Peptidase S26A, signal peptidase I BRM88_09665 IPR015927 Peptidase S24/S26A/S26B/S26C BRM88_09665 IPR019757 Peptidase S26A, signal peptidase I, lysine active site BRM88_09665 IPR019758 Peptidase S26A, signal peptidase I, conserved site BRM88_09665 IPR036286 BRM88_09665 BRM88_09670 IPR032314 BRM88_09670 BRM88_09675 IPR000999 Ribonuclease III domain BRM88_09675 IPR011907 Ribonuclease III BRM88_09675 IPR014720 Double-stranded RNA-binding domain BRM88_09675 IPR036389 BRM88_09675 BRM88_09680 IPR004044 K Homology domain, type 2 BRM88_09680 IPR005225 Small GTP-binding protein domain BRM88_09680 IPR005662 GTP-binding protein Era BRM88_09680 IPR006073 GTP binding domain BRM88_09680 IPR009019 K homology domain, prokaryotic type BRM88_09680 IPR015946 K homology domain-like, alpha/beta BRM88_09680 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_09685 IPR003717 Recombination protein O, RecO BRM88_09685 IPR012340 Nucleic acid-binding, OB-fold BRM88_09685 IPR022572 DNA replication/recombination mediator RecO, N-terminal BRM88_09685 IPR037278 BRM88_09685 BRM88_09690 IPR001789 Signal transduction response regulator, receiver domain BRM88_09690 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BRM88_09690 IPR011006 CheY-like superfamily BRM88_09690 IPR036641 BRM88_09690 BRM88_09695 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD BRM88_09695 IPR010280 (Uracil-5)-methyltransferase family BRM88_09695 IPR012340 Nucleic acid-binding, OB-fold BRM88_09695 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_09695 IPR030390 BRM88_09695 BRM88_09695 IPR030391 BRM88_09695 BRM88_09700 IPR012042 Uncharacterised conserved protein UCP016487, CYTH-type BRM88_09700 IPR023577 CYTH-like domain BRM88_09700 IPR033469 BRM88_09700 BRM88_09705 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 BRM88_09705 IPR032877 BRM88_09705 BRM88_09710 IPR002559 Transposase, IS4-like BRM88_09710 IPR008490 Transposase InsH, N-terminal BRM88_09715 IPR001853 DSBA-like thioredoxin domain BRM88_09715 IPR036249 BRM88_09715 BRM88_09720 IPR036188 BRM88_09720 BRM88_09725 IPR007357 Deoxyribodipyrimidine photolyase-related protein BRM88_09725 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_09725 IPR036134 BRM88_09725 BRM88_09730 IPR001764 Glycoside hydrolase, family 3, N-terminal BRM88_09730 IPR017853 Glycoside hydrolase, superfamily BRM88_09730 IPR019800 Glycoside hydrolase, family 3, active site BRM88_09730 IPR022956 Beta-hexosaminidase, bacterial BRM88_09730 IPR036962 BRM88_09730 BRM88_09735 IPR000836 Phosphoribosyltransferase domain BRM88_09735 IPR029057 Phosphoribosyltransferase-like BRM88_09740 IPR000845 Nucleoside phosphorylase domain BRM88_09740 IPR010044 Methylthioadenosine phosphorylase (MTAP) BRM88_09740 IPR018099 Purine phosphorylase, family 2, conserved site BRM88_09740 IPR035994 BRM88_09740 BRM88_09745 IPR002059 Cold-shock protein, DNA-binding BRM88_09745 IPR011129 Cold shock protein BRM88_09745 IPR012156 Cold shock, CspA BRM88_09745 IPR012340 Nucleic acid-binding, OB-fold BRM88_09745 IPR019844 Cold-shock conserved site BRM88_09760 IPR004843 Calcineurin-like phosphoesterase domain, apaH type BRM88_09760 IPR024173 Phosphoesterase, MJ0037 BRM88_09760 IPR026336 Metallophosphoesterase, DNA ligase-associated BRM88_09760 IPR029052 Metallo-dependent phosphatase-like BRM88_09765 IPR001650 Helicase, C-terminal BRM88_09765 IPR011545 DEAD/DEAH box helicase domain BRM88_09765 IPR013701 DEAD/H associated BRM88_09765 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BRM88_09765 IPR017170 Lhr-like ATP-dependent RNA helicase, predicted BRM88_09765 IPR026362 DEXH box helicase, DNA ligase-associated BRM88_09765 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_09770 IPR012308 DNA ligase, ATP-dependent, N-terminal BRM88_09770 IPR012309 DNA ligase, ATP-dependent, C-terminal BRM88_09770 IPR012310 DNA ligase, ATP-dependent, central BRM88_09770 IPR012340 Nucleic acid-binding, OB-fold BRM88_09770 IPR026333 ATP-dependent DNA ligase, PP_1105 family BRM88_09770 IPR036599 BRM88_09770 BRM88_09780 IPR026360 Putative exonuclease, DNA ligase-associated BRM88_09780 IPR036866 BRM88_09780 BRM88_09790 IPR007607 Protein of unknown function DUF583 BRM88_09795 IPR000160 GGDEF domain BRM88_09795 IPR007891 CHASE3 BRM88_09795 IPR029016 GAF domain-like BRM88_09795 IPR029787 Nucleotide cyclase BRM88_09810 IPR002155 Thiolase BRM88_09810 IPR016039 Thiolase-like BRM88_09810 IPR020610 Thiolase, active site BRM88_09810 IPR020615 Thiolase, acyl-enzyme intermediate active site BRM88_09810 IPR020616 Thiolase, N-terminal BRM88_09810 IPR020617 Thiolase, C-terminal BRM88_09815 IPR000209 Peptidase S8/S53 domain BRM88_09815 IPR005546 Autotransporter beta-domain BRM88_09815 IPR013425 Autotransporter-associated beta strand repeat BRM88_09815 IPR015500 Peptidase S8, subtilisin-related BRM88_09815 IPR023827 Peptidase S8, subtilisin, Asp-active site BRM88_09815 IPR023828 Peptidase S8, subtilisin, Ser-active site BRM88_09815 IPR036709 BRM88_09815 BRM88_09815 IPR036852 BRM88_09815 BRM88_09820 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase BRM88_09820 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal BRM88_09820 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain BRM88_09820 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal BRM88_09820 IPR033524 BRM88_09820 BRM88_09820 IPR036291 BRM88_09820 BRM88_09835 IPR002725 Protein of unknown function DUF45 BRM88_09840 IPR009760 Protein of unknown function DUF1328 BRM88_09845 IPR021250 Protein of unknown function DUF2789 BRM88_09850 IPR000962 Zinc finger, DksA/TraR C4-type BRM88_09850 IPR012783 Zinc finger, C4 DksA/TraR-type BRM88_09850 IPR020458 Zinc finger, DksA/TraR C4-type conserved site BRM88_09850 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria BRM88_09855 IPR006685 Mechanosensitive ion channel MscS BRM88_09855 IPR010920 Like-Sm (LSM) domain BRM88_09870 IPR012337 Ribonuclease H-like domain BRM88_09870 IPR038721 BRM88_09870 BRM88_09890 IPR013126 Heat shock protein 70 family BRM88_09895 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain BRM88_09905 IPR002524 Cation efflux protein BRM88_09905 IPR027469 Cation efflux protein transmembrane domain BRM88_09910 IPR004624 PhnA protein BRM88_09910 IPR013987 PhnA protein, N-terminal BRM88_09910 IPR013988 PhnA protein, C-terminal BRM88_09925 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal BRM88_09925 IPR013785 Aldolase-type TIM barrel BRM88_09930 IPR011701 Major facilitator superfamily BRM88_09930 IPR036259 BRM88_09930 BRM88_09950 IPR011971 Conserved hypothetical protein CHP02284 BRM88_09950 IPR012347 Ferritin-related BRM88_09950 IPR019052 Domain of unknown function DUF2383 BRM88_09955 IPR004175 2',5' RNA ligase BRM88_09955 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase BRM88_09960 IPR009218 Predicted HD phosphohydrolase BRM88_09965 IPR019180 Oxidoreductase-like, N-terminal BRM88_09970 IPR010333 Bacterial virulence BRM88_09970 IPR011225 Type IV secretory pathway, VirJ component BRM88_09970 IPR029058 Alpha/Beta hydrolase fold BRM88_09985 IPR016181 Acyl-CoA N-acyltransferase BRM88_09985 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD BRM88_09985 IPR024320 Lysylphosphatidylglycerol synthetase, domain of unknown function DUF2156 BRM88_09995 IPR006175 YjgF/Yer057p/UK114 family BRM88_09995 IPR035959 BRM88_09995 BRM88_10000 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_10005 IPR010721 Protein of unknown function DUF1295 BRM88_10010 IPR021306 Protein of unknown function DUF2878 BRM88_10015 IPR003333 Mycolic acid cyclopropane synthase BRM88_10015 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_10020 IPR010775 Protein of unknown function DUF1365 BRM88_10025 IPR002937 Amine oxidase BRM88_10025 IPR036188 BRM88_10025 BRM88_10030 IPR005804 Fatty acid desaturase, type 1 BRM88_10030 IPR015876 Fatty acid desaturase, type 1, core BRM88_10035 IPR018764 Anti-sigma K factor RskA BRM88_10040 IPR007627 RNA polymerase sigma-70 region 2 BRM88_10040 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BRM88_10040 IPR013324 RNA polymerase sigma factor, region 3/4 BRM88_10040 IPR013325 RNA polymerase sigma factor, region 2 BRM88_10040 IPR014284 RNA polymerase sigma-70 like domain BRM88_10040 IPR036388 BRM88_10040 BRM88_10060 IPR007202 4Fe-4S domain BRM88_10060 IPR010207 Electron transport complex, RnfB BRM88_10060 IPR011005 Dihydropteroate synthase-like BRM88_10060 IPR016463 Electron transport complex, RnfB, Proteobacteria BRM88_10060 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BRM88_10065 IPR023214 HAD-like domain BRM88_10065 IPR036412 BRM88_10065 BRM88_10070 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BRM88_10070 IPR002547 tRNA-binding domain BRM88_10070 IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal BRM88_10070 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding BRM88_10070 IPR012340 Nucleic acid-binding, OB-fold BRM88_10070 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_10070 IPR014758 Methionyl-tRNA synthetase BRM88_10070 IPR015413 Methionyl/Leucyl tRNA synthetase BRM88_10070 IPR023458 Methionine-tRNA ligase, type 1 BRM88_10070 IPR029038 Methionyl-tRNA synthetase, Zn-domain BRM88_10070 IPR033911 BRM88_10070 BRM88_10075 IPR019223 Domain of unknown function DUF2147 BRM88_10085 IPR009057 Homeodomain-like BRM88_10085 IPR025959 Winged helix-turn helix domain BRM88_10085 IPR038717 BRM88_10085 BRM88_10090 IPR002293 Amino acid/polyamine transporter I BRM88_10090 IPR004840 Amino acid permease, conserved site BRM88_10090 IPR004841 Amino acid permease/ SLC12A domain BRM88_10095 IPR003726 Homocysteine S-methyltransferase BRM88_10095 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT BRM88_10095 IPR036589 BRM88_10095 BRM88_10100 IPR010281 Protein of unknown function DUF885 BRM88_10110 IPR003744 Protein of unknown function DUF165 BRM88_10115 IPR007462 Protein of unknown function DUF502 BRM88_10125 IPR002559 Transposase, IS4-like BRM88_10125 IPR008490 Transposase InsH, N-terminal BRM88_10130 IPR014944 Toxin SymE-like BRM88_10135 IPR008490 Transposase InsH, N-terminal BRM88_10180 IPR009656 PHB de-polymerase, C-terminal BRM88_10180 IPR010915 Polyhydroxyalkanoate depolymerase BRM88_10180 IPR029058 Alpha/Beta hydrolase fold BRM88_10185 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_10190 IPR005265 Uncharacterised protein family UPF0093 BRM88_10205 IPR021913 Protein of unknown function DUF3526 BRM88_10205 IPR032688 BRM88_10205 BRM88_10210 IPR021913 Protein of unknown function DUF3526 BRM88_10215 IPR003439 ABC transporter-like BRM88_10215 IPR003593 AAA+ ATPase domain BRM88_10215 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_10220 IPR000531 TonB-dependent receptor, beta-barrel BRM88_10220 IPR012910 TonB-dependent receptor, plug BRM88_10220 IPR036942 BRM88_10220 BRM88_10220 IPR037066 BRM88_10220 BRM88_10230 IPR001095 Acetyl-CoA carboxylase, alpha subunit BRM88_10230 IPR029045 ClpP/crotonase-like domain BRM88_10235 IPR003141 Polymerase/histidinol phosphatase, N-terminal BRM88_10235 IPR004013 PHP, C-terminal BRM88_10235 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BRM88_10235 IPR004805 DNA polymerase III, alpha subunit BRM88_10235 IPR011708 Bacterial DNA polymerase III, alpha subunit BRM88_10235 IPR012340 Nucleic acid-binding, OB-fold BRM88_10235 IPR016195 Polymerase/histidinol phosphatase-like BRM88_10235 IPR029460 DNA polymerase, helix-hairpin-helix motif BRM88_10240 IPR012337 Ribonuclease H-like domain BRM88_10240 IPR022898 Ribonuclease HII BRM88_10240 IPR024567 Ribonuclease HII/HIII domain BRM88_10240 IPR036397 BRM88_10240 BRM88_10245 IPR003835 Glycosyl transferase, family 19 BRM88_10250 IPR001451 Bacterial transferase hexapeptide repeat BRM88_10250 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase BRM88_10250 IPR011004 Trimeric LpxA-like BRM88_10250 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal BRM88_10250 IPR037157 BRM88_10250 BRM88_10255 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ BRM88_10255 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ BRM88_10255 IPR029069 HotDog domain BRM88_10260 IPR001451 Bacterial transferase hexapeptide repeat BRM88_10260 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase BRM88_10260 IPR011004 Trimeric LpxA-like BRM88_10260 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region BRM88_10270 IPR000184 Bacterial surface antigen (D15) BRM88_10270 IPR010827 Surface antigen variable number BRM88_10270 IPR023707 Outer membrane protein assembly factor BamA BRM88_10275 IPR001478 PDZ domain BRM88_10275 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase BRM88_10275 IPR008915 Peptidase M50 BRM88_10275 IPR036034 BRM88_10275 BRM88_10280 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase BRM88_10280 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal BRM88_10280 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal BRM88_10280 IPR026877 DXP reductoisomerase C-terminal domain BRM88_10280 IPR036169 BRM88_10280 BRM88_10280 IPR036291 BRM88_10280 BRM88_10285 IPR000374 Phosphatidate cytidylyltransferase BRM88_10290 IPR001441 Decaprenyl diphosphate synthase-like BRM88_10290 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site BRM88_10290 IPR036424 BRM88_10290 BRM88_10295 IPR002661 Ribosome recycling factor BRM88_10295 IPR023584 Ribosome recycling factor domain BRM88_10295 IPR036191 BRM88_10295 BRM88_10300 IPR001048 Aspartate/glutamate/uridylate kinase BRM88_10300 IPR011817 Uridylate kinase BRM88_10300 IPR015963 Uridylate kinase, bacteria BRM88_10300 IPR036393 BRM88_10300 BRM88_10305 IPR013976 Metal-dependent hydrolase HDOD BRM88_10310 IPR001816 Translation elongation factor EFTs/EF1B BRM88_10310 IPR009060 UBA-like BRM88_10310 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation BRM88_10310 IPR018101 Translation elongation factor Ts, conserved site BRM88_10310 IPR036402 BRM88_10310 BRM88_10315 IPR001865 Ribosomal protein S2 BRM88_10315 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid BRM88_10315 IPR018130 Ribosomal protein S2, conserved site BRM88_10315 IPR023591 Ribosomal protein S2, flavodoxin-like domain BRM88_10320 IPR008962 PapD-like BRM88_10320 IPR016147 PapD, N-terminal, bacterial BRM88_10330 IPR007893 Spore coat protein U BRM88_10335 IPR000015 Outer membrane usher protein BRM88_10335 IPR025949 PapC-like, C-terminal domain BRM88_10340 IPR008962 PapD-like BRM88_10340 IPR013783 Immunoglobulin-like fold BRM88_10340 IPR016147 PapD, N-terminal, bacterial BRM88_10345 IPR007893 Spore coat protein U BRM88_10350 IPR000994 Peptidase M24, structural domain BRM88_10350 IPR001714 Peptidase M24, methionine aminopeptidase BRM88_10350 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 BRM88_10350 IPR036005 BRM88_10350 BRM88_10355 IPR002934 Nucleotidyl transferase domain BRM88_10355 IPR003607 HD/PDEase domain BRM88_10355 IPR006674 HD domain BRM88_10355 IPR010043 Protein-PII uridylyltransferase BRM88_10355 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase BRM88_10360 IPR001451 Bacterial transferase hexapeptide repeat BRM88_10360 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family BRM88_10360 IPR011004 Trimeric LpxA-like BRM88_10360 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 BRM88_10360 IPR037133 BRM88_10360 BRM88_10370 IPR006504 Transcriptional regulator Spx/MgsR BRM88_10370 IPR006660 Arsenate reductase-like BRM88_10370 IPR036249 BRM88_10370 BRM88_10375 IPR000182 GNAT domain BRM88_10375 IPR016181 Acyl-CoA N-acyltransferase BRM88_10380 IPR002933 Peptidase M20 BRM88_10380 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria BRM88_10380 IPR011650 Peptidase M20, dimerisation domain BRM88_10380 IPR036264 BRM88_10380 BRM88_10385 IPR001962 Asparagine synthase BRM88_10385 IPR006426 Asparagine synthase, glutamine-hydrolyzing BRM88_10385 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_10385 IPR017932 Glutamine amidotransferase type 2 domain BRM88_10385 IPR024286 Domain of unknown function DUF3700 BRM88_10385 IPR029055 Nucleophile aminohydrolases, N-terminal BRM88_10390 IPR006626 Parallel beta-helix repeat BRM88_10390 IPR006633 Carbohydrate-binding/sugar hydrolysis domain BRM88_10390 IPR011050 Pectin lyase fold/virulence factor BRM88_10390 IPR012334 Pectin lyase fold BRM88_10390 IPR022441 Parallel beta-helix repeat-2 BRM88_10390 IPR039448 BRM88_10390 BRM88_10400 IPR000531 TonB-dependent receptor, beta-barrel BRM88_10400 IPR010105 TonB-dependent siderophore receptor BRM88_10400 IPR010917 TonB-dependent receptor, conserved site BRM88_10400 IPR012910 TonB-dependent receptor, plug BRM88_10400 IPR036942 BRM88_10400 BRM88_10400 IPR037066 BRM88_10400 BRM88_10405 IPR002692 Penicillin amidase-like BRM88_10405 IPR014395 Penicillin/cephalosporin acylase BRM88_10405 IPR023343 Penicillin amidase type, domain1 BRM88_10405 IPR029055 Nucleophile aminohydrolases, N-terminal BRM88_10410 IPR002024 Bacterioferritin BRM88_10410 IPR008331 Ferritin/DPS protein domain BRM88_10410 IPR009078 Ferritin-like superfamily BRM88_10410 IPR012347 Ferritin-related BRM88_10420 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal BRM88_10420 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative BRM88_10420 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel BRM88_10420 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain BRM88_10420 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta BRM88_10420 IPR013760 DNA topoisomerase, type IIA-like domain BRM88_10420 IPR035516 BRM88_10420 BRM88_10430 IPR000835 MarR-type HTH domain BRM88_10430 IPR023187 Transcriptional regulator MarR-type, conserved site BRM88_10430 IPR036388 BRM88_10430 BRM88_10430 IPR036390 BRM88_10430 BRM88_10435 IPR003423 Outer membrane efflux protein BRM88_10435 IPR010131 RND efflux system, outer membrane lipoprotein, NodT BRM88_10440 IPR006143 RND efflux pump, membrane fusion protein BRM88_10440 IPR032317 BRM88_10440 BRM88_10445 IPR004638 Drug resistance transporter EmrB/QacA subfamily BRM88_10445 IPR011701 Major facilitator superfamily BRM88_10445 IPR036259 BRM88_10445 BRM88_10450 IPR001466 Beta-lactamase-related BRM88_10450 IPR012338 Beta-lactamase/transpeptidase-like BRM88_10485 IPR007235 Glycosyl transferase, family 28, C-terminal BRM88_10490 IPR005474 Transketolase, N-terminal BRM88_10490 IPR005475 Transketolase-like, pyrimidine-binding domain BRM88_10490 IPR005477 Deoxyxylulose-5-phosphate synthase BRM88_10490 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II BRM88_10490 IPR020826 Transketolase binding site BRM88_10490 IPR029061 Thiamin diphosphate-binding fold BRM88_10490 IPR033248 BRM88_10490 BRM88_10495 IPR003615 HNH nuclease BRM88_10495 IPR029471 HNH endonuclease 5 BRM88_10500 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain BRM88_10500 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal BRM88_10500 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain BRM88_10500 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal BRM88_10500 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria BRM88_10500 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain BRM88_10500 IPR036250 BRM88_10500 BRM88_10500 IPR037069 BRM88_10500 BRM88_10505 IPR004864 Late embryogenesis abundant protein, LEA-14 BRM88_10515 IPR000037 SsrA-binding protein BRM88_10515 IPR020081 SsrA-binding protein, conserved site BRM88_10515 IPR023620 Small protein B BRM88_10520 IPR005031 Streptomyces cyclase/dehydrase BRM88_10520 IPR023393 START-like domain BRM88_10525 IPR005346 RnfH protein BRM88_10525 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BRM88_10525 IPR037021 BRM88_10525 BRM88_10535 IPR007450 Lipoprotein SmpA/OmlA BRM88_10535 IPR026592 Outer membrane protein assembly factor BamE BRM88_10535 IPR037873 BRM88_10535 BRM88_10540 IPR002481 Ferric-uptake regulator BRM88_10540 IPR036388 BRM88_10540 BRM88_10540 IPR036390 BRM88_10540 BRM88_10545 IPR003395 RecF/RecN/SMC, N-terminal BRM88_10545 IPR004604 DNA recombination/repair protein RecN BRM88_10545 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_10550 IPR002571 Heat-inducible transcription repressor HrcA BRM88_10550 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain BRM88_10550 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal BRM88_10550 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain BRM88_10550 IPR029016 GAF domain-like BRM88_10550 IPR036388 BRM88_10550 BRM88_10550 IPR036390 BRM88_10550 BRM88_10555 IPR000740 GrpE nucleotide exchange factor BRM88_10555 IPR009012 GrpE nucleotide exchange factor, head BRM88_10555 IPR013805 GrpE nucleotide exchange factor, coiled-coil BRM88_10560 IPR012725 Chaperone DnaK BRM88_10560 IPR013126 Heat shock protein 70 family BRM88_10560 IPR018181 Heat shock protein 70, conserved site BRM88_10560 IPR029047 Heat shock protein 70kD, peptide-binding domain BRM88_10560 IPR029048 Heat shock protein 70kD, C-terminal domain BRM88_10565 IPR001305 Heat shock protein DnaJ, cysteine-rich domain BRM88_10565 IPR001623 DnaJ domain BRM88_10565 IPR002939 Chaperone DnaJ, C-terminal BRM88_10565 IPR008971 HSP40/DnaJ peptide-binding BRM88_10565 IPR012724 Chaperone DnaJ BRM88_10565 IPR036410 BRM88_10565 BRM88_10565 IPR036869 BRM88_10565 BRM88_10575 IPR004625 Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase BRM88_10575 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase BRM88_10575 IPR029056 Ribokinase-like BRM88_10580 IPR002912 ACT domain BRM88_10580 IPR003099 Prephenate dehydrogenase BRM88_10580 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like BRM88_10580 IPR036291 BRM88_10580 BRM88_10590 IPR012337 Ribonuclease H-like domain BRM88_10590 IPR038721 BRM88_10590 BRM88_10595 IPR003423 Outer membrane efflux protein BRM88_10600 IPR005119 LysR, substrate-binding BRM88_10600 IPR036388 BRM88_10600 BRM88_10600 IPR036390 BRM88_10600 BRM88_10615 IPR003439 ABC transporter-like BRM88_10615 IPR003593 AAA+ ATPase domain BRM88_10615 IPR011527 ABC transporter type 1, transmembrane domain BRM88_10615 IPR011918 ABC transporter, ATP-binding/permease protein BRM88_10615 IPR017871 ABC transporter, conserved site BRM88_10615 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_10615 IPR036640 BRM88_10615 BRM88_10620 IPR001498 Impact, N-terminal BRM88_10620 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal BRM88_10620 IPR020568 Ribosomal protein S5 domain 2-type fold BRM88_10620 IPR035647 BRM88_10620 BRM88_10620 IPR036956 BRM88_10620 BRM88_10625 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG BRM88_10625 IPR031100 BRM88_10625 BRM88_10630 IPR001100 BRM88_10630 BRM88_10630 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BRM88_10630 IPR006258 Dihydrolipoamide dehydrogenase BRM88_10630 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site BRM88_10630 IPR016156 FAD/NAD-linked reductase, dimerisation domain BRM88_10630 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain BRM88_10630 IPR036188 BRM88_10630 BRM88_10635 IPR000089 Biotin/lipoyl attachment BRM88_10635 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain BRM88_10635 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site BRM88_10635 IPR004167 E3 binding BRM88_10635 IPR006255 Dihydrolipoamide succinyltransferase BRM88_10635 IPR011053 Single hybrid motif BRM88_10635 IPR023213 Chloramphenicol acetyltransferase-like domain BRM88_10635 IPR036625 BRM88_10635 BRM88_10640 IPR001017 Dehydrogenase, E1 component BRM88_10640 IPR005475 Transketolase-like, pyrimidine-binding domain BRM88_10640 IPR011603 2-oxoglutarate dehydrogenase E1 component BRM88_10640 IPR029061 Thiamin diphosphate-binding fold BRM88_10640 IPR031717 BRM88_10640 BRM88_10640 IPR032106 BRM88_10640 BRM88_10645 IPR000182 GNAT domain BRM88_10645 IPR016181 Acyl-CoA N-acyltransferase BRM88_10650 IPR003347 JmjC domain BRM88_10655 IPR001478 PDZ domain BRM88_10655 IPR036034 BRM88_10655 BRM88_10665 IPR021417 Protein of unknown function DUF3060 BRM88_10670 IPR000362 Fumarate lyase family BRM88_10670 IPR004769 Adenylosuccinate lyase BRM88_10670 IPR008948 L-Aspartase-like BRM88_10670 IPR013539 Adenylosuccinate lyase PurB, C-terminal BRM88_10670 IPR020557 Fumarate lyase, conserved site BRM88_10670 IPR022761 Fumarate lyase, N-terminal BRM88_10670 IPR024083 Fumarase/histidase, N-terminal BRM88_10700 IPR000362 Fumarate lyase family BRM88_10700 IPR005677 Fumarate hydratase, class II BRM88_10700 IPR008948 L-Aspartase-like BRM88_10700 IPR018951 Fumarase C, C-terminal BRM88_10700 IPR020557 Fumarate lyase, conserved site BRM88_10700 IPR022761 Fumarate lyase, N-terminal BRM88_10700 IPR024083 Fumarase/histidase, N-terminal BRM88_10720 IPR025164 Domain of unknown function DUF4097 BRM88_10730 IPR003439 ABC transporter-like BRM88_10730 IPR003593 AAA+ ATPase domain BRM88_10730 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_10735 IPR000524 Transcription regulator HTH, GntR BRM88_10735 IPR036388 BRM88_10735 BRM88_10735 IPR036390 BRM88_10735 BRM88_10745 IPR000889 Glutathione peroxidase BRM88_10745 IPR029759 Glutathione peroxidase active site BRM88_10745 IPR036249 BRM88_10745 BRM88_10750 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal BRM88_10750 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain BRM88_10750 IPR036944 BRM88_10750 BRM88_10755 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal BRM88_10755 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like BRM88_10755 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation BRM88_10755 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal BRM88_10755 IPR017476 UDP-glucose/GDP-mannose dehydrogenase BRM88_10755 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type BRM88_10755 IPR036220 BRM88_10755 BRM88_10755 IPR036291 BRM88_10755 BRM88_10760 IPR007236 SlyX BRM88_10765 IPR018636 Protein of unknown function DUF2058 BRM88_10770 IPR025737 MetA-pathway of phenol degradation, putative BRM88_10775 IPR000843 Transcription regulator HTH, LacI BRM88_10775 IPR010982 Lambda repressor-like, DNA-binding domain BRM88_10775 IPR028082 Periplasmic binding protein-like I BRM88_10780 IPR005275 L-fucose permease FucP BRM88_10780 IPR005964 Bacterial glucose/galactose transporter BRM88_10780 IPR011701 Major facilitator superfamily BRM88_10780 IPR036259 BRM88_10780 BRM88_10785 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BRM88_10785 IPR011611 Carbohydrate kinase PfkB BRM88_10785 IPR029056 Ribokinase-like BRM88_10790 IPR008928 Six-hairpin glycosidase-like BRM88_10790 IPR012341 Six-hairpin glycosidase BRM88_10795 IPR000489 Pterin-binding BRM88_10795 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain BRM88_10795 IPR004223 Vitamin B12-dependent methionine synthase, activation domain BRM88_10795 IPR006158 Cobalamin (vitamin B12)-binding domain BRM88_10795 IPR011005 Dihydropteroate synthase-like BRM88_10795 IPR011822 Cobalamin-dependent methionine synthase BRM88_10795 IPR036594 BRM88_10795 BRM88_10795 IPR036724 BRM88_10795 BRM88_10795 IPR037010 BRM88_10795 BRM88_10800 IPR003726 Homocysteine S-methyltransferase BRM88_10800 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT BRM88_10800 IPR036589 BRM88_10800 BRM88_10805 IPR001845 HTH ArsR-type DNA-binding domain BRM88_10805 IPR013216 Methyltransferase type 11 BRM88_10805 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_10805 IPR036388 BRM88_10805 BRM88_10805 IPR036390 BRM88_10805 BRM88_10810 IPR006089 Acyl-CoA dehydrogenase, conserved site BRM88_10810 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain BRM88_10810 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal BRM88_10810 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain BRM88_10810 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal BRM88_10810 IPR036250 BRM88_10810 BRM88_10810 IPR037069 BRM88_10810 BRM88_10830 IPR013830 BRM88_10830 BRM88_10830 IPR036514 BRM88_10830 BRM88_10840 IPR001900 BRM88_10840 BRM88_10840 IPR003029 Ribosomal protein S1, RNA-binding domain BRM88_10840 IPR004476 Ribonuclease II/ribonuclease R BRM88_10840 IPR011129 Cold shock protein BRM88_10840 IPR011805 Ribonuclease R BRM88_10840 IPR012340 Nucleic acid-binding, OB-fold BRM88_10840 IPR013223 Ribonuclease B, N-terminal OB domain BRM88_10840 IPR022966 Ribonuclease II/R, conserved site BRM88_10840 IPR022967 RNA-binding domain, S1 BRM88_10860 IPR001537 tRNA/rRNA methyltransferase, SpoU type BRM88_10860 IPR004441 RNA methyltransferase TrmH family BRM88_10860 IPR013123 RNA 2-O ribose methyltransferase, substrate binding BRM88_10860 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB BRM88_10860 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BRM88_10860 IPR029028 Alpha/beta knot methyltransferases BRM88_10860 IPR029064 50S ribosomal protein L30e-like BRM88_10875 IPR002559 Transposase, IS4-like BRM88_10875 IPR008490 Transposase InsH, N-terminal BRM88_10885 IPR024442 Transposase, zinc-ribbon BRM88_10885 IPR024445 Transposase, ISXO2-like BRM88_10900 IPR001207 Transposase, mutator type BRM88_10905 IPR008490 Transposase InsH, N-terminal BRM88_10910 IPR002059 Cold-shock protein, DNA-binding BRM88_10910 IPR012156 Cold shock, CspA BRM88_10910 IPR012340 Nucleic acid-binding, OB-fold BRM88_10915 IPR000073 Alpha/beta hydrolase fold-1 BRM88_10915 IPR008220 Homoserine acetyltransferase BRM88_10915 IPR029058 Alpha/Beta hydrolase fold BRM88_10925 IPR002559 Transposase, IS4-like BRM88_10925 IPR008490 Transposase InsH, N-terminal BRM88_10940 IPR024442 Transposase, zinc-ribbon BRM88_10940 IPR024445 Transposase, ISXO2-like BRM88_10970 IPR024442 Transposase, zinc-ribbon BRM88_10970 IPR024445 Transposase, ISXO2-like BRM88_10985 IPR002559 Transposase, IS4-like BRM88_10985 IPR008490 Transposase InsH, N-terminal BRM88_11005 IPR006260 TonB, C-terminal BRM88_11005 IPR037682 BRM88_11005 BRM88_11010 IPR006260 TonB, C-terminal BRM88_11010 IPR037682 BRM88_11010 BRM88_11015 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain BRM88_11015 IPR002317 Serine-tRNA ligase, type1 BRM88_11015 IPR010978 tRNA-binding arm BRM88_11015 IPR015866 Serine-tRNA synthetase, type1, N-terminal BRM88_11030 IPR012337 Ribonuclease H-like domain BRM88_11030 IPR038721 BRM88_11030 BRM88_11035 IPR002559 Transposase, IS4-like BRM88_11035 IPR008490 Transposase InsH, N-terminal BRM88_11040 IPR003680 Flavodoxin-like fold BRM88_11040 IPR023048 NADH-azoreductase, FMN-dependent BRM88_11040 IPR029039 Flavoprotein-like BRM88_11045 IPR000847 Transcription regulator HTH, LysR BRM88_11045 IPR005119 LysR, substrate-binding BRM88_11045 IPR036388 BRM88_11045 BRM88_11045 IPR036390 BRM88_11045 BRM88_11065 IPR005042 Avirulence protein PthA-related, Xanthomonas species BRM88_11085 IPR005042 Avirulence protein PthA-related, Xanthomonas species BRM88_11105 IPR005042 Avirulence protein PthA-related, Xanthomonas species BRM88_11115 IPR012337 Ribonuclease H-like domain BRM88_11115 IPR038721 BRM88_11115 BRM88_11125 IPR001096 Peptidase C13, legumain BRM88_11125 IPR029030 Caspase-like domain BRM88_11135 IPR006439 HAD hydrolase, subfamily IA BRM88_11135 IPR023214 HAD-like domain BRM88_11135 IPR023943 Enolase-phosphatase E1 BRM88_11135 IPR036412 BRM88_11135 BRM88_11140 IPR004313 Acireductone dioxygenase ARD family BRM88_11140 IPR011051 RmlC-like cupin domain BRM88_11140 IPR014710 RmlC-like jelly roll fold BRM88_11140 IPR023956 Acireductone dioxygenase ARD BRM88_11145 IPR001303 Class II aldolase/adducin N-terminal BRM88_11145 IPR017714 Methylthioribulose-1-phosphate dehydratase BRM88_11145 IPR036409 BRM88_11145 BRM88_11150 IPR002293 Amino acid/polyamine transporter I BRM88_11155 IPR002293 Amino acid/polyamine transporter I BRM88_11160 IPR000086 NUDIX hydrolase domain BRM88_11160 IPR015797 NUDIX hydrolase domain-like BRM88_11165 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BRM88_11165 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain BRM88_11165 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BRM88_11165 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BRM88_11165 IPR036291 BRM88_11165 BRM88_11170 IPR004113 FAD-linked oxidase, C-terminal BRM88_11170 IPR006094 FAD linked oxidase, N-terminal BRM88_11170 IPR016164 FAD-linked oxidase-like, C-terminal BRM88_11170 IPR016167 FAD-binding, type 2, subdomain 1 BRM88_11170 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 BRM88_11170 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 BRM88_11170 IPR036318 BRM88_11170 BRM88_11175 IPR012661 Conserved hypothetical protein CHP02448 BRM88_11180 IPR025178 Domain of unknown function DUF4105 BRM88_11190 IPR011990 Tetratricopeptide-like helical domain BRM88_11195 IPR005616 Cytochrome C biogenesis protein CcmH BRM88_11195 IPR038297 BRM88_11195 BRM88_11200 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE BRM88_11200 IPR013740 Redoxin BRM88_11200 IPR017937 Thioredoxin, conserved site BRM88_11200 IPR036249 BRM88_11200 BRM88_11205 IPR002541 Cytochrome c assembly protein BRM88_11205 IPR003567 Cytochrome c-type biogenesis protein BRM88_11205 IPR003568 Cytochrome c-type biogenesis protein CcmF BRM88_11205 IPR032523 BRM88_11205 BRM88_11210 IPR004329 CcmE/CycJ protein BRM88_11210 IPR036127 BRM88_11210 BRM88_11215 IPR007078 Haem exporter protein D (CcmD) BRM88_11220 IPR002541 Cytochrome c assembly protein BRM88_11220 IPR003557 Cytochrome c-type biogenesis protein CcmC BRM88_11225 IPR003544 Cytochrome c-type biogenesis protein CcmB BRM88_11225 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria BRM88_11230 IPR003439 ABC transporter-like BRM88_11230 IPR003593 AAA+ ATPase domain BRM88_11230 IPR005895 ABC transporter, haem export, CcmA BRM88_11230 IPR017871 ABC transporter, conserved site BRM88_11230 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_11235 IPR004839 Aminotransferase, class I/classII BRM88_11235 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BRM88_11235 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BRM88_11235 IPR015424 Pyridoxal phosphate-dependent transferase BRM88_11240 IPR003010 Carbon-nitrogen hydrolase BRM88_11240 IPR036526 BRM88_11240 BRM88_11245 IPR024442 Transposase, zinc-ribbon BRM88_11245 IPR024445 Transposase, ISXO2-like BRM88_11250 IPR007788 Glutamine cyclotransferase BRM88_11250 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like BRM88_11250 IPR015943 WD40/YVTN repeat-like-containing domain BRM88_11260 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BRM88_11260 IPR002942 RNA-binding S4 domain BRM88_11260 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F BRM88_11260 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site BRM88_11260 IPR020103 Pseudouridine synthase, catalytic domain BRM88_11260 IPR036986 BRM88_11260 BRM88_11265 IPR005234 Chromosome segregation/condensation protein ScpB BRM88_11265 IPR036388 BRM88_11265 BRM88_11265 IPR036390 BRM88_11265 BRM88_11270 IPR003768 Prokaryotic chromosome segregation/condensation protein ScpA BRM88_11275 IPR005545 YCII-related BRM88_11275 IPR011008 Dimeric alpha-beta barrel BRM88_11280 IPR002634 BolA protein BRM88_11280 IPR036065 BRM88_11280 BRM88_11285 IPR000843 Transcription regulator HTH, LacI BRM88_11285 IPR010982 Lambda repressor-like, DNA-binding domain BRM88_11285 IPR028082 Periplasmic binding protein-like I BRM88_11290 IPR000531 TonB-dependent receptor, beta-barrel BRM88_11290 IPR012910 TonB-dependent receptor, plug BRM88_11290 IPR037066 BRM88_11290 BRM88_11295 IPR016883 Uncharacterised conserved protein UCP028431 BRM88_11295 IPR019282 Domain of unknown function DUF2329 BRM88_11300 IPR006059 Bacterial extracellular solute-binding, family 1 BRM88_11305 IPR000515 MetI-like domain BRM88_11305 IPR035906 BRM88_11305 BRM88_11310 IPR000515 MetI-like domain BRM88_11310 IPR035906 BRM88_11310 BRM88_11315 IPR000421 Coagulation factor 5/8 C-terminal type domain BRM88_11315 IPR008928 Six-hairpin glycosidase-like BRM88_11315 IPR008979 Galactose-binding domain-like BRM88_11315 IPR012341 Six-hairpin glycosidase BRM88_11315 IPR032790 BRM88_11315 BRM88_11325 IPR002816 Pheromone shutdown, TraB BRM88_11325 IPR005230 Pheromone shutdown, TraB, bacterial/archaeal BRM88_11330 IPR016181 Acyl-CoA N-acyltransferase BRM88_11335 IPR003010 Carbon-nitrogen hydrolase BRM88_11335 IPR036526 BRM88_11335 BRM88_11345 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type BRM88_11355 IPR000473 Ribosomal protein L36 BRM88_11355 IPR035977 BRM88_11355 BRM88_11360 IPR003136 Cytidylate kinase BRM88_11360 IPR011994 Cytidylate kinase domain BRM88_11360 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_11365 IPR000110 Ribosomal protein S1 BRM88_11365 IPR003029 Ribosomal protein S1, RNA-binding domain BRM88_11365 IPR012340 Nucleic acid-binding, OB-fold BRM88_11365 IPR022967 RNA-binding domain, S1 BRM88_11370 IPR000119 Histone-like bacterial DNA-binding protein BRM88_11370 IPR005685 Integration host factor, beta subunit BRM88_11370 IPR010992 Integration host factor (IHF)-like DNA-binding domain BRM88_11370 IPR020816 Histone-like DNA-binding protein, conserved site BRM88_11375 IPR010445 Protein of unknown function DUF1049 BRM88_11380 IPR011990 Tetratricopeptide-like helical domain BRM88_11380 IPR030865 BRM88_11380 BRM88_11385 IPR000715 Glycosyl transferase, family 4 BRM88_11390 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain BRM88_11390 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_11390 IPR036291 BRM88_11390 BRM88_11395 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type BRM88_11395 IPR005835 Nucleotidyl transferase BRM88_11395 IPR029044 Nucleotide-diphospho-sugar transferases BRM88_11410 IPR023163 SMc04008-like domain BRM88_11410 IPR036810 BRM88_11410 BRM88_11415 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase BRM88_11415 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BRM88_11415 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BRM88_11415 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site BRM88_11415 IPR036291 BRM88_11415 BRM88_11420 IPR000644 CBS domain BRM88_11420 IPR001093 IMP dehydrogenase/GMP reductase BRM88_11420 IPR005990 Inosine-5'-monophosphate dehydrogenase BRM88_11420 IPR013785 Aldolase-type TIM barrel BRM88_11420 IPR015875 IMP dehydrogenase / GMP reductase, conserved site BRM88_11425 IPR001674 GMP synthase, C-terminal BRM88_11425 IPR004739 GMP synthase, N-terminal BRM88_11425 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_11425 IPR017926 Glutamine amidotransferase BRM88_11425 IPR022310 NAD/GMP synthase BRM88_11425 IPR022955 GMP synthase BRM88_11425 IPR029062 Class I glutamine amidotransferase-like BRM88_11430 IPR018752 Uncharacterised protein family UPF0753 BRM88_11435 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal BRM88_11435 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase BRM88_11440 IPR000847 Transcription regulator HTH, LysR BRM88_11440 IPR005119 LysR, substrate-binding BRM88_11440 IPR036388 BRM88_11440 BRM88_11440 IPR036390 BRM88_11440 BRM88_11465 IPR004630 Uncharacterised protein family UPF0324, bacteria BRM88_11465 IPR018383 Uncharacterised protein family UPF0324, prokaryote BRM88_11470 IPR000847 Transcription regulator HTH, LysR BRM88_11470 IPR005119 LysR, substrate-binding BRM88_11470 IPR036388 BRM88_11470 BRM88_11470 IPR036390 BRM88_11470 BRM88_11485 IPR001789 Signal transduction response regulator, receiver domain BRM88_11485 IPR003660 HAMP linker domain BRM88_11485 IPR011006 CheY-like superfamily BRM88_11485 IPR029151 Periplasmic sensor domain-like BRM88_11485 IPR033462 BRM88_11485 BRM88_11495 IPR001046 NRAMP family BRM88_11500 IPR001367 Iron dependent repressor-like, metal binding and dimerisation domain BRM88_11500 IPR022687 Iron dependent repressor, N-terminal BRM88_11500 IPR022689 Iron dependent repressor, diptheria toxin type BRM88_11500 IPR036388 BRM88_11500 BRM88_11500 IPR036390 BRM88_11500 BRM88_11500 IPR036421 BRM88_11500 BRM88_11505 IPR002125 CMP/dCMP deaminase, zinc-binding BRM88_11505 IPR016192 APOBEC/CMP deaminase, zinc-binding BRM88_11505 IPR016193 Cytidine deaminase-like BRM88_11505 IPR028883 tRNA-specific adenosine deaminase BRM88_11510 IPR012337 Ribonuclease H-like domain BRM88_11510 IPR013520 Exonuclease, RNase T/DNA polymerase III BRM88_11510 IPR022894 Oligoribonuclease BRM88_11510 IPR036397 BRM88_11510 BRM88_11515 IPR006685 Mechanosensitive ion channel MscS BRM88_11515 IPR006686 Mechanosensitive ion channel MscS, conserved site BRM88_11515 IPR010920 Like-Sm (LSM) domain BRM88_11515 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 BRM88_11515 IPR011066 Mechanosensitive ion channel MscS, C-terminal BRM88_11515 IPR023408 BRM88_11515 BRM88_11520 IPR000121 PEP-utilising enzyme, C-terminal BRM88_11520 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding BRM88_11520 IPR006319 Phosphoenolpyruvate synthase BRM88_11520 IPR008279 PEP-utilising enzyme, mobile domain BRM88_11520 IPR013815 ATP-grasp fold, subdomain 1 BRM88_11520 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain BRM88_11520 IPR018274 PEP-utilising enzyme, active site BRM88_11520 IPR023151 PEP-utilising enzyme, conserved site BRM88_11520 IPR036637 BRM88_11520 BRM88_11525 IPR005177 Bifunctional kinase-pyrophosphorylase BRM88_11525 IPR026530 Phosphoenolpyruvate synthase regulatory protein BRM88_11530 IPR009659 Protein of unknown function DUF1249 BRM88_11535 IPR000086 NUDIX hydrolase domain BRM88_11535 IPR003562 Mutator MutX protein BRM88_11535 IPR015797 NUDIX hydrolase domain-like BRM88_11535 IPR020084 NUDIX hydrolase, conserved site BRM88_11540 IPR002347 Glucose/ribitol dehydrogenase BRM88_11540 IPR011294 3-hydroxybutyrate dehydrogenase BRM88_11540 IPR020904 Short-chain dehydrogenase/reductase, conserved site BRM88_11540 IPR036291 BRM88_11540 BRM88_11545 IPR000462 CDP-alcohol phosphatidyltransferase BRM88_11550 IPR010123 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit BRM88_11555 IPR000073 Alpha/beta hydrolase fold-1 BRM88_11555 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit BRM88_11555 IPR029058 Alpha/Beta hydrolase fold BRM88_11560 IPR007168 Phage shock protein, PspC, N-terminal BRM88_11570 IPR006076 FAD dependent oxidoreductase BRM88_11570 IPR036188 BRM88_11570 BRM88_11580 IPR003029 Ribosomal protein S1, RNA-binding domain BRM88_11580 IPR006641 YqgF/RNase H-like domain BRM88_11580 IPR010994 RuvA domain 2-like BRM88_11580 IPR012337 Ribonuclease H-like domain BRM88_11580 IPR012340 Nucleic acid-binding, OB-fold BRM88_11580 IPR018974 Tex-like protein, N-terminal BRM88_11580 IPR022967 RNA-binding domain, S1 BRM88_11580 IPR023319 Tex-like protein, HTH domain BRM88_11580 IPR023323 Tex-like domain BRM88_11580 IPR032639 BRM88_11580 BRM88_11580 IPR037027 BRM88_11580 BRM88_11590 IPR009057 Homeodomain-like BRM88_11590 IPR025959 Winged helix-turn helix domain BRM88_11590 IPR038717 BRM88_11590 BRM88_11595 IPR001789 Signal transduction response regulator, receiver domain BRM88_11595 IPR002197 DNA binding HTH domain, Fis-type BRM88_11595 IPR009057 Homeodomain-like BRM88_11595 IPR011006 CheY-like superfamily BRM88_11600 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_11600 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_11600 IPR036097 BRM88_11600 BRM88_11600 IPR036890 BRM88_11600 BRM88_11605 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type BRM88_11605 IPR011005 Dihydropteroate synthase-like BRM88_11605 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial BRM88_11610 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BRM88_11610 IPR036938 BRM88_11610 BRM88_11620 IPR005829 Sugar transporter, conserved site BRM88_11620 IPR011701 Major facilitator superfamily BRM88_11620 IPR036259 BRM88_11620 BRM88_11625 IPR001584 Integrase, catalytic core BRM88_11625 IPR012337 Ribonuclease H-like domain BRM88_11625 IPR025246 Transposase IS30-like HTH domain BRM88_11625 IPR036397 BRM88_11625 BRM88_11635 IPR001920 Asp/Glu racemase BRM88_11640 IPR000620 Drug/metabolite transporter BRM88_11645 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase BRM88_11645 IPR006094 FAD linked oxidase, N-terminal BRM88_11645 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal BRM88_11645 IPR016167 FAD-binding, type 2, subdomain 1 BRM88_11645 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 BRM88_11645 IPR036318 BRM88_11645 BRM88_11645 IPR036635 BRM88_11645 BRM88_11650 IPR001295 Dihydroorotate dehydrogenase, conserved site BRM88_11650 IPR005719 Dihydroorotate dehydrogenase, class 2 BRM88_11650 IPR005720 Dihydroorotate dehydrogenase domain BRM88_11650 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 BRM88_11650 IPR013785 Aldolase-type TIM barrel BRM88_11655 IPR013216 Methyltransferase type 11 BRM88_11655 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_11660 IPR025241 Domain of unknown function DUF4190 BRM88_11665 IPR015590 Aldehyde dehydrogenase domain BRM88_11665 IPR016161 Aldehyde/histidinol dehydrogenase BRM88_11665 IPR016162 Aldehyde dehydrogenase, N-terminal BRM88_11665 IPR016163 Aldehyde dehydrogenase, C-terminal BRM88_11665 IPR029510 Aldehyde dehydrogenase, glutamic acid active site BRM88_11680 IPR001048 Aspartate/glutamate/uridylate kinase BRM88_11680 IPR001341 Aspartate kinase domain BRM88_11680 IPR001342 Homoserine dehydrogenase, catalytic BRM88_11680 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding BRM88_11680 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I BRM88_11680 IPR018042 Aspartate kinase, conserved site BRM88_11680 IPR019811 Homoserine dehydrogenase, conserved site BRM88_11680 IPR027795 GATS-like ACT domain BRM88_11680 IPR036291 BRM88_11680 BRM88_11680 IPR036393 BRM88_11680 BRM88_11685 IPR000870 Homoserine kinase BRM88_11685 IPR006204 GHMP kinase N-terminal domain BRM88_11685 IPR013750 GHMP kinase, C-terminal domain BRM88_11685 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BRM88_11685 IPR020568 Ribosomal protein S5 domain 2-type fold BRM88_11685 IPR036554 BRM88_11685 BRM88_11695 IPR009799 EthD domain BRM88_11695 IPR011008 Dimeric alpha-beta barrel BRM88_11700 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site BRM88_11700 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BRM88_11700 IPR004450 Threonine synthase-like BRM88_11700 IPR029144 Threonine synthase, N-terminal BRM88_11700 IPR036052 BRM88_11700 BRM88_11700 IPR037158 BRM88_11700 BRM88_11705 IPR032676 BRM88_11705 BRM88_11715 IPR004154 Anticodon-binding BRM88_11715 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit BRM88_11715 IPR015807 Histidine-tRNA ligase BRM88_11715 IPR036621 BRM88_11715 BRM88_11730 IPR000831 Trp repressor BRM88_11730 IPR010921 Trp repressor/replication initiator BRM88_11730 IPR013368 TrpR homologue YerC/YecD BRM88_11730 IPR038116 BRM88_11730 BRM88_11735 IPR013115 Histidine biosynthesis HisG, C-terminal BRM88_11735 IPR013820 ATP phosphoribosyltransferase, catalytic domain BRM88_11735 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BRM88_11735 IPR018198 ATP phosphoribosyltransferase, conserved site BRM88_11735 IPR020621 ATP phosphoribosyltransferase HisG, long form BRM88_11740 IPR001692 Histidinol dehydrogenase, conserved site BRM88_11740 IPR012131 Histidinol dehydrogenase BRM88_11740 IPR016161 Aldehyde/histidinol dehydrogenase BRM88_11740 IPR022695 Histidinol dehydrogenase, monofunctional BRM88_11745 IPR004839 Aminotransferase, class I/classII BRM88_11745 IPR005861 Histidinol-phosphate aminotransferase family BRM88_11745 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BRM88_11745 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BRM88_11745 IPR015424 Pyridoxal phosphate-dependent transferase BRM88_11750 IPR000807 Imidazoleglycerol-phosphate dehydratase BRM88_11750 IPR005954 Histidinol-phosphatase BRM88_11750 IPR006543 Histidinol-phosphate phosphatase BRM88_11750 IPR006549 HAD-superfamily hydrolase,subfamily IIIA BRM88_11750 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site BRM88_11750 IPR020566 Histidine biosynthesis bifunctional protein HisB BRM88_11750 IPR020568 Ribosomal protein S5 domain 2-type fold BRM88_11750 IPR023214 HAD-like domain BRM88_11750 IPR036412 BRM88_11750 BRM88_11750 IPR038494 BRM88_11750 BRM88_11755 IPR010139 Imidazole glycerol phosphate synthase, subunit H BRM88_11755 IPR017926 Glutamine amidotransferase BRM88_11755 IPR029062 Class I glutamine amidotransferase-like BRM88_11760 IPR006062 Histidine biosynthesis BRM88_11760 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA BRM88_11760 IPR011060 Ribulose-phosphate binding barrel BRM88_11760 IPR013785 Aldolase-type TIM barrel BRM88_11760 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase BRM88_11765 IPR004651 Histidine biosynthesis, HisF BRM88_11765 IPR006062 Histidine biosynthesis BRM88_11765 IPR011060 Ribulose-phosphate binding barrel BRM88_11765 IPR013785 Aldolase-type TIM barrel BRM88_11770 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain BRM88_11770 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase BRM88_11770 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like BRM88_11770 IPR023019 Histidine biosynthesis bifunctional protein HisIE BRM88_11770 IPR038019 BRM88_11770 BRM88_11780 IPR005042 Avirulence protein PthA-related, Xanthomonas species BRM88_11795 IPR005042 Avirulence protein PthA-related, Xanthomonas species BRM88_11805 IPR011050 Pectin lyase fold/virulence factor BRM88_11805 IPR012334 Pectin lyase fold BRM88_11805 IPR032153 BRM88_11805 BRM88_11810 IPR004027 SEC-C motif BRM88_11830 IPR003491 Replication initiation factor BRM88_11835 IPR003512 Bacteriophage M13, G5P, DNA-binding BRM88_11835 IPR012340 Nucleic acid-binding, OB-fold BRM88_11850 IPR019670 Protein of unkown function DUF2523 BRM88_11855 IPR008900 Zona occludens toxin BRM88_11860 IPR008875 TraX BRM88_11875 IPR021077 Bacteriophage phi-Lf, Orf112 BRM88_11885 IPR008875 TraX BRM88_11890 IPR008900 Zona occludens toxin BRM88_11890 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_11895 IPR019670 Protein of unkown function DUF2523 BRM88_11905 IPR008020 Major coat protein, Inovirus-type BRM88_11915 IPR003512 Bacteriophage M13, G5P, DNA-binding BRM88_11915 IPR012340 Nucleic acid-binding, OB-fold BRM88_11935 IPR021096 Vibrio phage VSK, Orf152 BRM88_11990 IPR005042 Avirulence protein PthA-related, Xanthomonas species BRM88_12005 IPR005042 Avirulence protein PthA-related, Xanthomonas species BRM88_12025 IPR005042 Avirulence protein PthA-related, Xanthomonas species BRM88_12030 IPR002514 Transposase IS3/IS911family BRM88_12030 IPR009057 Homeodomain-like BRM88_12035 IPR001584 Integrase, catalytic core BRM88_12035 IPR012337 Ribonuclease H-like domain BRM88_12035 IPR025948 HTH-like domain BRM88_12035 IPR036397 BRM88_12035 BRM88_12045 IPR012337 Ribonuclease H-like domain BRM88_12045 IPR025246 Transposase IS30-like HTH domain BRM88_12050 IPR002559 Transposase, IS4-like BRM88_12050 IPR008490 Transposase InsH, N-terminal BRM88_12060 IPR024442 Transposase, zinc-ribbon BRM88_12060 IPR024445 Transposase, ISXO2-like BRM88_12075 IPR001207 Transposase, mutator type BRM88_12080 IPR001584 Integrase, catalytic core BRM88_12080 IPR012337 Ribonuclease H-like domain BRM88_12085 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BRM88_12085 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BRM88_12105 IPR000462 CDP-alcohol phosphatidyltransferase BRM88_12105 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase BRM88_12110 IPR000305 GIY-YIG nuclease superfamily BRM88_12110 IPR001162 UvrC family homology region BRM88_12110 IPR001943 UVR domain BRM88_12110 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 BRM88_12110 IPR004791 UvrABC system, subunit C BRM88_12110 IPR010994 RuvA domain 2-like BRM88_12110 IPR035901 BRM88_12110 BRM88_12110 IPR036876 BRM88_12110 BRM88_12110 IPR038476 BRM88_12110 BRM88_12115 IPR001258 NHL repeat BRM88_12115 IPR011042 Six-bladed beta-propeller, TolB-like BRM88_12115 IPR036249 BRM88_12115 BRM88_12120 IPR017867 Protein-tyrosine phosphatase, low molecular weight BRM88_12120 IPR023485 Phosphotyrosine protein phosphatase I superfamily BRM88_12120 IPR036196 BRM88_12120 BRM88_12125 IPR003329 Acylneuraminate cytidylyltransferase BRM88_12125 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase BRM88_12125 IPR029044 Nucleotide-diphospho-sugar transferases BRM88_12130 IPR003758 Tetraacyldisaccharide 4'-kinase BRM88_12130 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_12135 IPR003439 ABC transporter-like BRM88_12135 IPR003593 AAA+ ATPase domain BRM88_12135 IPR011527 ABC transporter type 1, transmembrane domain BRM88_12135 IPR011917 ABC transporter, lipid A export, MsbA BRM88_12135 IPR017871 ABC transporter, conserved site BRM88_12135 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_12135 IPR036640 BRM88_12135 BRM88_12140 IPR003400 Biopolymer transport protein ExbD/TolR BRM88_12145 IPR002898 MotA/TolQ/ExbB proton channel BRM88_12150 IPR001279 Beta-lactamase-like BRM88_12150 IPR004477 ComEC/Rec2-related protein BRM88_12150 IPR004797 Competence protein ComEC/Rec2 BRM88_12150 IPR025405 Domain of unknown function DUF4131 BRM88_12150 IPR036866 BRM88_12150 BRM88_12155 IPR024442 Transposase, zinc-ribbon BRM88_12155 IPR024445 Transposase, ISXO2-like BRM88_12170 IPR003439 ABC transporter-like BRM88_12170 IPR003593 AAA+ ATPase domain BRM88_12170 IPR011924 Lipoprotein releasing system, ATP-binding protein BRM88_12170 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_12175 IPR003838 Permease FtsX-like BRM88_12175 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family BRM88_12175 IPR025857 MacB-like periplasmic core domain BRM88_12185 IPR005631 Flavinator of succinate dehydrogenase BRM88_12185 IPR036714 BRM88_12185 BRM88_12190 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein BRM88_12190 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site BRM88_12190 IPR009051 Alpha-helical ferredoxin BRM88_12190 IPR012675 Beta-grasp domain BRM88_12190 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BRM88_12190 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal BRM88_12190 IPR036010 BRM88_12190 BRM88_12200 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site BRM88_12200 IPR003953 FAD binding domain BRM88_12200 IPR011281 Succinate dehydrogenase, flavoprotein subunit BRM88_12200 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit BRM88_12200 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal BRM88_12200 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain BRM88_12200 IPR036188 BRM88_12200 BRM88_12200 IPR037099 BRM88_12200 BRM88_12205 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit BRM88_12205 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor BRM88_12205 IPR034804 BRM88_12205 BRM88_12210 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit BRM88_12210 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit BRM88_12210 IPR034804 BRM88_12210 BRM88_12215 IPR012875 Protein of unknown function DUF1674 BRM88_12220 IPR006222 Glycine cleavage T-protein, N-terminal BRM88_12220 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain BRM88_12220 IPR017703 YgfZ/GcvT conserved site BRM88_12230 IPR003439 ABC transporter-like BRM88_12230 IPR003593 AAA+ ATPase domain BRM88_12230 IPR008995 Molybdate/tungstate binding, C-terminal BRM88_12230 IPR013611 Transport-associated OB, type 2 BRM88_12230 IPR017871 ABC transporter, conserved site BRM88_12230 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_12235 IPR001282 Glucose-6-phosphate dehydrogenase BRM88_12235 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding BRM88_12235 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal BRM88_12235 IPR036291 BRM88_12235 BRM88_12240 IPR003836 Glucokinase BRM88_12245 IPR005900 6-phosphogluconolactonase, DevB-type BRM88_12245 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase BRM88_12245 IPR037171 BRM88_12245 BRM88_12250 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase BRM88_12250 IPR004786 6-phosphogluconate dehydratase BRM88_12250 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site BRM88_12250 IPR037237 BRM88_12250 BRM88_12255 IPR000887 KDPG/KHG aldolase BRM88_12255 IPR013785 Aldolase-type TIM barrel BRM88_12255 IPR031337 BRM88_12255 BRM88_12280 IPR001789 Signal transduction response regulator, receiver domain BRM88_12280 IPR011006 CheY-like superfamily BRM88_12285 IPR000014 PAS domain BRM88_12285 IPR001610 PAC motif BRM88_12285 IPR001789 Signal transduction response regulator, receiver domain BRM88_12285 IPR003018 GAF domain BRM88_12285 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_12285 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_12285 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_12285 IPR011006 CheY-like superfamily BRM88_12285 IPR013655 PAS fold-3 BRM88_12285 IPR013656 PAS fold-4 BRM88_12285 IPR029016 GAF domain-like BRM88_12285 IPR035965 BRM88_12285 BRM88_12285 IPR036097 BRM88_12285 BRM88_12285 IPR036890 BRM88_12285 BRM88_12315 IPR000160 GGDEF domain BRM88_12315 IPR029787 Nucleotide cyclase BRM88_12345 IPR003187 Phospholipase A1 BRM88_12345 IPR036541 BRM88_12345 BRM88_12355 IPR036282 BRM88_12355 BRM88_12365 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain BRM88_12365 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain BRM88_12365 IPR011167 Iron-dependent fumarate hydratase BRM88_12365 IPR036660 BRM88_12365 BRM88_12370 IPR003439 ABC transporter-like BRM88_12370 IPR003593 AAA+ ATPase domain BRM88_12370 IPR017871 ABC transporter, conserved site BRM88_12370 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_12370 IPR036640 BRM88_12370 BRM88_12375 IPR001433 Oxidoreductase FAD/NAD(P)-binding BRM88_12375 IPR008333 Oxidoreductase, FAD-binding domain BRM88_12375 IPR017938 Riboflavin synthase-like beta-barrel BRM88_12375 IPR039261 BRM88_12375 BRM88_12380 IPR000889 Glutathione peroxidase BRM88_12380 IPR029759 Glutathione peroxidase active site BRM88_12380 IPR036249 BRM88_12380 BRM88_12395 IPR013196 Helix-turn-helix, type 11 BRM88_12395 IPR036388 BRM88_12395 BRM88_12410 IPR007627 RNA polymerase sigma-70 region 2 BRM88_12410 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BRM88_12410 IPR013324 RNA polymerase sigma factor, region 3/4 BRM88_12410 IPR013325 RNA polymerase sigma factor, region 2 BRM88_12410 IPR014284 RNA polymerase sigma-70 like domain BRM88_12410 IPR036388 BRM88_12410 BRM88_12420 IPR000835 MarR-type HTH domain BRM88_12420 IPR036388 BRM88_12420 BRM88_12420 IPR036390 BRM88_12420 BRM88_12430 IPR016181 Acyl-CoA N-acyltransferase BRM88_12430 IPR031165 BRM88_12430 BRM88_12440 IPR022764 Peptidase S54, rhomboid domain BRM88_12440 IPR035952 BRM88_12440 BRM88_12450 IPR000834 Peptidase M14, carboxypeptidase A BRM88_12455 IPR001764 Glycoside hydrolase, family 3, N-terminal BRM88_12455 IPR002772 Glycoside hydrolase family 3 C-terminal domain BRM88_12455 IPR013783 Immunoglobulin-like fold BRM88_12455 IPR017853 Glycoside hydrolase, superfamily BRM88_12455 IPR026891 Fibronectin type III-like domain BRM88_12455 IPR036881 BRM88_12455 BRM88_12455 IPR036962 BRM88_12455 BRM88_12470 IPR000160 GGDEF domain BRM88_12470 IPR001633 EAL domain BRM88_12470 IPR003018 GAF domain BRM88_12470 IPR029016 GAF domain-like BRM88_12470 IPR029787 Nucleotide cyclase BRM88_12470 IPR035919 BRM88_12470 BRM88_12480 IPR001734 Sodium/solute symporter BRM88_12480 IPR038377 BRM88_12480 BRM88_12490 IPR001764 Glycoside hydrolase, family 3, N-terminal BRM88_12490 IPR002772 Glycoside hydrolase family 3 C-terminal domain BRM88_12490 IPR017853 Glycoside hydrolase, superfamily BRM88_12490 IPR036881 BRM88_12490 BRM88_12490 IPR036962 BRM88_12490 BRM88_12495 IPR008557 Protein of unknown function DUF839 BRM88_12505 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_12510 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM BRM88_12510 IPR036165 BRM88_12510 BRM88_12515 IPR001672 Phosphoglucose isomerase (PGI) BRM88_12515 IPR018189 Phosphoglucose isomerase, conserved site BRM88_12515 IPR023096 Phosphoglucose isomerase, C-terminal BRM88_12520 IPR003190 Aspartate decarboxylase BRM88_12520 IPR009010 Aspartate decarboxylase-like domain BRM88_12525 IPR003721 Pantoate-beta-alanine ligase BRM88_12525 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_12530 IPR003700 Ketopantoate hydroxymethyltransferase BRM88_12530 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain BRM88_12535 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK BRM88_12535 IPR035907 BRM88_12535 BRM88_12540 IPR002646 Poly A polymerase, head domain BRM88_12540 IPR010206 Poly(A) polymerase I BRM88_12540 IPR025866 Polymerase A arginine-rich C-terminal domain BRM88_12540 IPR032828 BRM88_12540 BRM88_12550 IPR003801 GTP cyclohydrolase FolE2/MptA BRM88_12550 IPR022838 GTP cyclohydrolase FolE2 BRM88_12555 IPR002508 Cell wall hydrolase/autolysin, catalytic BRM88_12555 IPR021731 AMIN domain BRM88_12575 IPR002559 Transposase, IS4-like BRM88_12575 IPR008490 Transposase InsH, N-terminal BRM88_12580 IPR000209 Peptidase S8/S53 domain BRM88_12580 IPR005546 Autotransporter beta-domain BRM88_12580 IPR006315 Outer membrane autotransporter barrel BRM88_12580 IPR013425 Autotransporter-associated beta strand repeat BRM88_12580 IPR015500 Peptidase S8, subtilisin-related BRM88_12580 IPR036709 BRM88_12580 BRM88_12580 IPR036852 BRM88_12580 BRM88_12590 IPR006143 RND efflux pump, membrane fusion protein BRM88_12590 IPR032317 BRM88_12590 BRM88_12595 IPR001036 Acriflavin resistance protein BRM88_12595 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA BRM88_12595 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BRM88_12600 IPR003423 Outer membrane efflux protein BRM88_12600 IPR010131 RND efflux system, outer membrane lipoprotein, NodT BRM88_12605 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_12605 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_12605 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_12605 IPR036097 BRM88_12605 BRM88_12605 IPR036890 BRM88_12605 BRM88_12610 IPR000792 Transcription regulator LuxR, C-terminal BRM88_12610 IPR001789 Signal transduction response regulator, receiver domain BRM88_12610 IPR011006 CheY-like superfamily BRM88_12610 IPR016032 Signal transduction response regulator, C-terminal effector BRM88_12610 IPR036388 BRM88_12610 BRM88_12615 IPR005546 Autotransporter beta-domain BRM88_12615 IPR011050 Pectin lyase fold/virulence factor BRM88_12615 IPR013425 Autotransporter-associated beta strand repeat BRM88_12615 IPR036709 BRM88_12615 BRM88_12620 IPR009057 Homeodomain-like BRM88_12620 IPR025959 Winged helix-turn helix domain BRM88_12620 IPR038717 BRM88_12620 BRM88_12625 IPR024973 ESPR domain BRM88_12650 IPR001986 Enolpyruvate transferase domain BRM88_12650 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase BRM88_12650 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta BRM88_12650 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site BRM88_12650 IPR036968 BRM88_12650 BRM88_12655 IPR001086 Prephenate dehydratase BRM88_12655 IPR002701 Chorismate mutase BRM88_12655 IPR002912 ACT domain BRM88_12655 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase BRM88_12655 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain BRM88_12655 IPR036263 BRM88_12655 BRM88_12655 IPR036979 BRM88_12655 BRM88_12660 IPR000192 Aminotransferase class V domain BRM88_12660 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BRM88_12660 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BRM88_12660 IPR015424 Pyridoxal phosphate-dependent transferase BRM88_12660 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site BRM88_12660 IPR022278 Phosphoserine aminotransferase BRM88_12665 IPR000572 Oxidoreductase, molybdopterin-binding domain BRM88_12665 IPR022867 Sulphoxide reductase catalytic subunit YedY BRM88_12665 IPR036374 BRM88_12665 BRM88_12675 IPR013130 Ferric reductase transmembrane component-like domain BRM88_12675 IPR022837 Sulphoxide reductase heme-binding subunit YedZ BRM88_12680 IPR000253 Forkhead-associated (FHA) domain BRM88_12680 IPR008984 SMAD/FHA domain BRM88_12680 IPR032030 BRM88_12680 BRM88_12685 IPR013433 Putative polyhydroxyalkanoic acid system protein BRM88_12690 IPR008769 Poly granule associated BRM88_12695 IPR007560 Restriction endonuclease type IV, Mrr BRM88_12695 IPR011335 Restriction endonuclease type II-like BRM88_12700 IPR000524 Transcription regulator HTH, GntR BRM88_12700 IPR010248 Histidine utilization repressor BRM88_12700 IPR011663 UbiC transcription regulator-associated BRM88_12700 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain BRM88_12700 IPR036388 BRM88_12700 BRM88_12700 IPR036390 BRM88_12700 BRM88_12705 IPR006680 Amidohydrolase 1 BRM88_12705 IPR010252 Formiminoglutamate deiminase BRM88_12705 IPR011059 Metal-dependent hydrolase, composite domain BRM88_12705 IPR032466 BRM88_12705 BRM88_12710 IPR005920 Imidazolonepropionase BRM88_12710 IPR011059 Metal-dependent hydrolase, composite domain BRM88_12710 IPR013108 Amidohydrolase 3 BRM88_12710 IPR032466 BRM88_12710 BRM88_12715 IPR001106 Aromatic amino acid lyase BRM88_12715 IPR005921 Histidine ammonia-lyase BRM88_12715 IPR008948 L-Aspartase-like BRM88_12715 IPR022313 Phenylalanine/histidine ammonia-lyases, active site BRM88_12715 IPR024083 Fumarase/histidase, N-terminal BRM88_12720 IPR007709 N-formylglutamate amidohydrolase BRM88_12720 IPR010247 N-formylglutamate deformylase BRM88_12725 IPR023636 Urocanase conserved site BRM88_12725 IPR023637 Urocanase BRM88_12725 IPR035085 BRM88_12725 BRM88_12725 IPR035400 BRM88_12725 BRM88_12725 IPR035401 BRM88_12725 BRM88_12725 IPR036190 BRM88_12725 BRM88_12725 IPR038364 BRM88_12725 BRM88_12730 IPR002656 Acyltransferase 3 BRM88_12745 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal BRM88_12745 IPR005743 DNA gyrase, subunit A BRM88_12745 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel BRM88_12745 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain BRM88_12745 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta BRM88_12745 IPR013760 DNA topoisomerase, type IIA-like domain BRM88_12745 IPR035516 BRM88_12745 BRM88_12750 IPR000649 Initiation factor 2B-related BRM88_12750 IPR005251 Methylthioribose-1-phosphate isomerase BRM88_12750 IPR011559 Initiation factor 2B alpha/beta/delta BRM88_12750 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain BRM88_12750 IPR037171 BRM88_12750 BRM88_12760 IPR021381 Protein of unknown function DUF3011 BRM88_12765 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) BRM88_12765 IPR004525 Elongation factor P--(R)-beta-lysine ligase BRM88_12765 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal BRM88_12770 IPR001357 BRCT domain BRM88_12770 IPR001679 NAD-dependent DNA ligase BRM88_12770 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type BRM88_12770 IPR004150 NAD-dependent DNA ligase, OB-fold BRM88_12770 IPR010994 RuvA domain 2-like BRM88_12770 IPR012340 Nucleic acid-binding, OB-fold BRM88_12770 IPR013839 NAD-dependent DNA ligase, adenylation BRM88_12770 IPR013840 NAD-dependent DNA ligase, N-terminal BRM88_12770 IPR018239 NAD-dependent DNA ligase, active site BRM88_12770 IPR036420 BRM88_12770 BRM88_12780 IPR007449 ZipA, C-terminal FtsZ-binding domain BRM88_12780 IPR011919 Cell division protein ZipA BRM88_12780 IPR036765 BRM88_12780 BRM88_12785 IPR003395 RecF/RecN/SMC, N-terminal BRM88_12785 IPR010935 SMCs flexible hinge BRM88_12785 IPR011890 Structural maintenance of chromosomes protein, prokaryotic BRM88_12785 IPR024704 Structural maintenance of chromosomes protein BRM88_12785 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_12785 IPR036277 BRM88_12785 BRM88_12790 IPR009027 Ribosomal protein L9/RNase H1, N-terminal BRM88_12790 IPR020069 Ribosomal protein L9, C-terminal BRM88_12790 IPR020070 Ribosomal protein L9, N-terminal BRM88_12790 IPR020594 Ribosomal protein L9, bacteria/chloroplast BRM88_12790 IPR036791 BRM88_12790 BRM88_12790 IPR036935 BRM88_12790 BRM88_12795 IPR001648 Ribosomal protein S18 BRM88_12795 IPR018275 Ribosomal protein S18, conserved site BRM88_12795 IPR036870 BRM88_12795 BRM88_12800 IPR000529 Ribosomal protein S6 BRM88_12800 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 BRM88_12800 IPR020814 Ribosomal protein S6, plastid/chloroplast BRM88_12800 IPR035980 BRM88_12800 BRM88_12805 IPR000361 FeS cluster biogenesis BRM88_12805 IPR016092 FeS cluster insertion protein BRM88_12805 IPR017870 FeS cluster insertion, C-terminal, conserved site BRM88_12805 IPR035903 BRM88_12805 BRM88_12815 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb BRM88_12815 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) BRM88_12815 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BRM88_12815 IPR004522 Asparagine-tRNA ligase BRM88_12815 IPR012340 Nucleic acid-binding, OB-fold BRM88_12840 IPR001765 Carbonic anhydrase BRM88_12840 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site BRM88_12840 IPR036874 BRM88_12840 BRM88_12845 IPR010329 3-hydroxyanthranilic acid dioxygenase BRM88_12845 IPR011051 RmlC-like cupin domain BRM88_12845 IPR014710 RmlC-like jelly roll fold BRM88_12855 IPR000192 Aminotransferase class V domain BRM88_12855 IPR010111 Kynureninase BRM88_12855 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BRM88_12855 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BRM88_12855 IPR015424 Pyridoxal phosphate-dependent transferase BRM88_12860 IPR002938 Monooxygenase, FAD-binding BRM88_12860 IPR027545 Kynurenine 3-monooxygenase BRM88_12860 IPR036188 BRM88_12860 BRM88_12865 IPR012337 Ribonuclease H-like domain BRM88_12865 IPR013520 Exonuclease, RNase T/DNA polymerase III BRM88_12865 IPR013620 Exonuclease C-terminal BRM88_12865 IPR023607 Exodeoxyribonuclease I BRM88_12865 IPR036397 BRM88_12865 BRM88_12865 IPR038649 BRM88_12865 BRM88_12870 IPR012808 Conserved hypothetical protein CHP02453 BRM88_12870 IPR015996 Uncharacterised conserved protein UCP028451 BRM88_12875 IPR023210 NADP-dependent oxidoreductase domain BRM88_12875 IPR036812 BRM88_12875 BRM88_12880 IPR021330 Protein of unknown function DUF2939 BRM88_12885 IPR010394 5-nucleotidase BRM88_12890 IPR002504 Inorganic polyphosphate/ATP-NAD kinase BRM88_12890 IPR016064 ATP-NAD kinase-like domain BRM88_12890 IPR017437 ATP-NAD kinase, PpnK-type, all-beta BRM88_12890 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 BRM88_12900 IPR000241 Putative RNA methylase domain BRM88_12900 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BRM88_12900 IPR004114 THUMP BRM88_12900 IPR017244 Ribosomal RNA large subunit methyltransferase K/L BRM88_12900 IPR019614 S-adenosylmethionine-dependent methyltransferase BRM88_12900 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_12915 IPR000182 GNAT domain BRM88_12915 IPR016181 Acyl-CoA N-acyltransferase BRM88_12920 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA BRM88_12920 IPR029058 Alpha/Beta hydrolase fold BRM88_12925 IPR005302 Molybdenum cofactor sulfurase, C-terminal BRM88_12925 IPR011037 Pyruvate kinase-like, insert domain BRM88_12930 IPR002502 N-acetylmuramoyl-L-alanine amidase domain BRM88_12930 IPR036505 BRM88_12930 BRM88_12935 IPR012467 Protein of unknown function DUF1684 BRM88_12940 IPR001763 Rhodanese-like domain BRM88_12940 IPR036873 BRM88_12940 BRM88_12945 IPR000086 NUDIX hydrolase domain BRM88_12945 IPR010710 Protein of unknown function DUF1289 BRM88_12945 IPR015797 NUDIX hydrolase domain-like BRM88_12950 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal BRM88_12950 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain BRM88_12950 IPR036944 BRM88_12950 BRM88_12955 IPR001753 Crotonase superfamily BRM88_12955 IPR014748 Crontonase, C-terminal BRM88_12955 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site BRM88_12955 IPR029045 ClpP/crotonase-like domain BRM88_12965 IPR000445 Helix-hairpin-helix motif BRM88_12965 IPR003265 HhH-GPD domain BRM88_12965 IPR004036 Endonuclease III-like, conserved site-2 BRM88_12965 IPR005759 Endonuclease III BRM88_12965 IPR011257 DNA glycosylase BRM88_12965 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal BRM88_12975 IPR001765 Carbonic anhydrase BRM88_12975 IPR036874 BRM88_12975 BRM88_12980 IPR002559 Transposase, IS4-like BRM88_12980 IPR008490 Transposase InsH, N-terminal BRM88_12995 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 BRM88_12995 IPR032877 BRM88_12995 BRM88_13010 IPR010870 Phosphate-selective porin O/P BRM88_13010 IPR023614 Porin domain BRM88_13015 IPR005673 ABC transporter, phosphate-binding protein PstS BRM88_13015 IPR024370 PBP domain BRM88_13020 IPR005673 ABC transporter, phosphate-binding protein PstS BRM88_13020 IPR024370 PBP domain BRM88_13025 IPR000515 MetI-like domain BRM88_13025 IPR011864 Phosphate ABC transporter, permease protein PstC BRM88_13025 IPR035906 BRM88_13025 BRM88_13030 IPR000515 MetI-like domain BRM88_13030 IPR005672 Phosphate transport system permease protein PstA BRM88_13030 IPR035906 BRM88_13030 BRM88_13035 IPR003439 ABC transporter-like BRM88_13035 IPR003593 AAA+ ATPase domain BRM88_13035 IPR005670 Phosphate transport system permease protein 1 BRM88_13035 IPR017871 ABC transporter, conserved site BRM88_13035 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_13040 IPR026022 PhoU domain BRM88_13040 IPR028366 Phosphate transport system protein PhoU BRM88_13040 IPR038078 BRM88_13040 BRM88_13045 IPR024572 Protein of unknown function DUF3315 BRM88_13050 IPR005987 Ribonuclease T BRM88_13050 IPR012337 Ribonuclease H-like domain BRM88_13050 IPR013520 Exonuclease, RNase T/DNA polymerase III BRM88_13050 IPR036397 BRM88_13050 BRM88_13055 IPR012337 Ribonuclease H-like domain BRM88_13055 IPR038721 BRM88_13055 BRM88_13060 IPR002559 Transposase, IS4-like BRM88_13060 IPR008490 Transposase InsH, N-terminal BRM88_13065 IPR001207 Transposase, mutator type BRM88_13070 IPR012337 Ribonuclease H-like domain BRM88_13070 IPR038721 BRM88_13070 BRM88_13095 IPR004107 Integrase, SAM-like, N-terminal BRM88_13095 IPR010998 Integrase, Lambda-type, N-terminal BRM88_13100 IPR005665 Protein-export membrane protein SecF, bacterial BRM88_13100 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BRM88_13100 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site BRM88_13100 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial BRM88_13105 IPR005791 Protein translocase subunit SecD BRM88_13105 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BRM88_13105 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site BRM88_13105 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial BRM88_13105 IPR027398 SecD export protein N-terminal TM domain BRM88_13110 IPR003849 Preprotein translocase YajC BRM88_13115 IPR002616 tRNA-guanine(15) transglycosylase-like BRM88_13115 IPR004803 Queuine tRNA-ribosyltransferase BRM88_13115 IPR036511 BRM88_13115 BRM88_13120 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA BRM88_13120 IPR036100 BRM88_13120 BRM88_13125 IPR000485 AsnC-type HTH domain BRM88_13125 IPR011008 Dimeric alpha-beta barrel BRM88_13125 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BRM88_13125 IPR019887 Transcription regulator AsnC-type, C-terminal BRM88_13125 IPR019888 Transcription regulator AsnC-type BRM88_13125 IPR036388 BRM88_13125 BRM88_13125 IPR036390 BRM88_13125 BRM88_13130 IPR005814 Aminotransferase class-III BRM88_13130 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BRM88_13130 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BRM88_13130 IPR015424 Pyridoxal phosphate-dependent transferase BRM88_13140 IPR007577 Glycosyltransferase, DXD sugar-binding motif BRM88_13140 IPR029044 Nucleotide-diphospho-sugar transferases BRM88_13160 IPR003431 Beta propeller phytase BRM88_13160 IPR011042 Six-bladed beta-propeller, TolB-like BRM88_13180 IPR005765 Uracil phosphoribosyl transferase BRM88_13180 IPR029057 Phosphoribosyltransferase-like BRM88_13180 IPR034332 BRM88_13180 BRM88_13195 IPR009057 Homeodomain-like BRM88_13195 IPR025959 Winged helix-turn helix domain BRM88_13195 IPR038717 BRM88_13195 BRM88_13200 IPR000101 Gamma-glutamyltranspeptidase BRM88_13200 IPR029055 Nucleophile aminohydrolases, N-terminal BRM88_13205 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BRM88_13205 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BRM88_13220 IPR001980 Coenzyme A biosynthesis protein BRM88_13220 IPR004821 Cytidyltransferase-like domain BRM88_13220 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_13225 IPR004398 RNA methyltransferase, RsmD BRM88_13225 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_13230 IPR001404 Heat shock protein Hsp90 family BRM88_13230 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_13230 IPR019805 Heat shock protein Hsp90, conserved site BRM88_13230 IPR020568 Ribosomal protein S5 domain 2-type fold BRM88_13230 IPR020575 Heat shock protein Hsp90, N-terminal BRM88_13230 IPR036890 BRM88_13230 BRM88_13230 IPR037196 BRM88_13230 BRM88_13240 IPR012337 Ribonuclease H-like domain BRM88_13240 IPR038721 BRM88_13240 BRM88_13245 IPR000594 UBA/THIF-type NAD/FAD binding fold BRM88_13245 IPR001763 Rhodanese-like domain BRM88_13245 IPR035985 BRM88_13245 BRM88_13245 IPR036873 BRM88_13245 BRM88_13255 IPR024442 Transposase, zinc-ribbon BRM88_13255 IPR024445 Transposase, ISXO2-like BRM88_13260 IPR002559 Transposase, IS4-like BRM88_13260 IPR008490 Transposase InsH, N-terminal BRM88_13275 IPR002559 Transposase, IS4-like BRM88_13275 IPR008490 Transposase InsH, N-terminal BRM88_13285 IPR002559 Transposase, IS4-like BRM88_13285 IPR008490 Transposase InsH, N-terminal BRM88_13290 IPR025246 Transposase IS30-like HTH domain BRM88_13315 IPR001453 Molybdopterin binding domain BRM88_13315 IPR005110 MoeA, N-terminal and linker domain BRM88_13315 IPR005111 MoeA, C-terminal, domain IV BRM88_13315 IPR036135 BRM88_13315 BRM88_13315 IPR036425 BRM88_13315 BRM88_13315 IPR036688 BRM88_13315 BRM88_13320 IPR003593 AAA+ ATPase domain BRM88_13320 IPR005225 Small GTP-binding protein domain BRM88_13320 IPR006073 GTP binding domain BRM88_13320 IPR015946 K homology domain-like, alpha/beta BRM88_13320 IPR016484 GTP-binding protein EngA BRM88_13320 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_13320 IPR032859 BRM88_13320 BRM88_13325 IPR002372 Pyrrolo-quinoline quinone repeat BRM88_13325 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily BRM88_13325 IPR015943 WD40/YVTN repeat-like-containing domain BRM88_13325 IPR017687 Outer membrane protein assembly factor BamB BRM88_13325 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BRM88_13330 IPR011990 Tetratricopeptide-like helical domain BRM88_13330 IPR018704 Domain of unknown function DUF09976 BRM88_13335 IPR025194 Domain of unknown function DUF4115 BRM88_13340 IPR011990 Tetratricopeptide-like helical domain BRM88_13340 IPR013360 Pilus biogenesis/stability type IV, PilW BRM88_13340 IPR019734 Tetratricopeptide repeat BRM88_13345 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr BRM88_13345 IPR007197 Radical SAM BRM88_13345 IPR013785 Aldolase-type TIM barrel BRM88_13345 IPR027492 Dual-specificity RNA methyltransferase RlmN BRM88_13350 IPR001564 Nucleoside diphosphate kinase BRM88_13350 IPR023005 Nucleoside diphosphate kinase, active site BRM88_13350 IPR034907 BRM88_13350 BRM88_13350 IPR036850 BRM88_13350 BRM88_13355 IPR001647 DNA-binding HTH domain, TetR-type BRM88_13355 IPR009057 Homeodomain-like BRM88_13355 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BRM88_13355 IPR036271 BRM88_13355 BRM88_13360 IPR001753 Crotonase superfamily BRM88_13360 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal BRM88_13360 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding BRM88_13360 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like BRM88_13360 IPR013328 Dehydrogenase, multihelical BRM88_13360 IPR029045 ClpP/crotonase-like domain BRM88_13360 IPR036291 BRM88_13360 BRM88_13365 IPR002155 Thiolase BRM88_13365 IPR016039 Thiolase-like BRM88_13365 IPR020610 Thiolase, active site BRM88_13365 IPR020613 Thiolase, conserved site BRM88_13365 IPR020615 Thiolase, acyl-enzyme intermediate active site BRM88_13365 IPR020616 Thiolase, N-terminal BRM88_13365 IPR020617 Thiolase, C-terminal BRM88_13370 IPR001807 Chloride channel, voltage gated BRM88_13370 IPR014743 Chloride channel, core BRM88_13375 IPR011322 Nitrogen regulatory PII-like, alpha/beta BRM88_13380 IPR003691 Putative fluoride ion transporter CrcB BRM88_13385 IPR003793 Domain of unknown function DUF190 BRM88_13385 IPR011322 Nitrogen regulatory PII-like, alpha/beta BRM88_13385 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BRM88_13390 IPR003593 AAA+ ATPase domain BRM88_13390 IPR003959 ATPase, AAA-type, core BRM88_13390 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal BRM88_13390 IPR021886 MgsA AAA+ ATPase C-terminal BRM88_13390 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_13390 IPR032423 BRM88_13390 BRM88_13405 IPR004564 Outer membrane lipoprotein carrier protein LolA-like BRM88_13405 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria BRM88_13405 IPR029046 Lipoprotein localisation LolA/LolB/LppX BRM88_13410 IPR002931 Transglutaminase-like BRM88_13410 IPR024618 Domain of unknown function DUF3857 BRM88_13410 IPR038765 BRM88_13410 BRM88_13415 IPR002543 FtsK domain BRM88_13415 IPR003593 AAA+ ATPase domain BRM88_13415 IPR018541 FtsK gamma domain BRM88_13415 IPR025199 Domain of unknown function DUF4117 BRM88_13415 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_13415 IPR036388 BRM88_13415 BRM88_13415 IPR036390 BRM88_13415 BRM88_13420 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II BRM88_13420 IPR005982 Thioredoxin reductase BRM88_13420 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site BRM88_13420 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain BRM88_13420 IPR036188 BRM88_13420 BRM88_13425 IPR007434 Protein of unknown function DUF482 BRM88_13425 IPR016181 Acyl-CoA N-acyltransferase BRM88_13435 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase BRM88_13435 IPR016181 Acyl-CoA N-acyltransferase BRM88_13440 IPR004368 Translation initiation factor IF-1 BRM88_13440 IPR006196 RNA-binding domain, S1, IF1 type BRM88_13440 IPR012340 Nucleic acid-binding, OB-fold BRM88_13440 IPR022967 RNA-binding domain, S1 BRM88_13445 IPR001270 ClpA/B family BRM88_13445 IPR003593 AAA+ ATPase domain BRM88_13445 IPR003959 ATPase, AAA-type, core BRM88_13445 IPR004176 Clp, N-terminal BRM88_13445 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA BRM88_13445 IPR018368 ClpA/B, conserved site 1 BRM88_13445 IPR019489 Clp ATPase, C-terminal BRM88_13445 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_13445 IPR028299 ClpA/B, conserved site 2 BRM88_13445 IPR036628 BRM88_13445 BRM88_13450 IPR003769 Adaptor protein ClpS, core BRM88_13450 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BRM88_13450 IPR022935 ATP-dependent Clp protease adaptor protein ClpS BRM88_13455 IPR000086 NUDIX hydrolase domain BRM88_13455 IPR015797 NUDIX hydrolase domain-like BRM88_13455 IPR020084 NUDIX hydrolase, conserved site BRM88_13460 IPR004506 tRNA-specific 2-thiouridylase BRM88_13460 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_13460 IPR023382 Adenine nucleotide alpha hydrolase-like domains BRM88_13465 IPR007451 Uncharacterised protein family UPF0274 BRM88_13465 IPR035932 BRM88_13465 BRM88_13470 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BRM88_13485 IPR000014 PAS domain BRM88_13485 IPR000160 GGDEF domain BRM88_13485 IPR001610 PAC motif BRM88_13485 IPR001633 EAL domain BRM88_13485 IPR013655 PAS fold-3 BRM88_13485 IPR029787 Nucleotide cyclase BRM88_13485 IPR035919 BRM88_13485 BRM88_13485 IPR035965 BRM88_13485 BRM88_13490 IPR000014 PAS domain BRM88_13490 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_13490 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_13490 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain BRM88_13490 IPR013656 PAS fold-4 BRM88_13490 IPR035965 BRM88_13490 BRM88_13490 IPR036890 BRM88_13490 BRM88_13495 IPR000160 GGDEF domain BRM88_13495 IPR001633 EAL domain BRM88_13495 IPR001789 Signal transduction response regulator, receiver domain BRM88_13495 IPR011006 CheY-like superfamily BRM88_13495 IPR029787 Nucleotide cyclase BRM88_13495 IPR035919 BRM88_13495 BRM88_13500 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_13500 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_13500 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_13500 IPR036097 BRM88_13500 BRM88_13500 IPR036890 BRM88_13500 BRM88_13505 IPR036679 BRM88_13505 BRM88_13510 IPR007412 Anti-sigma-28 factor, FlgM BRM88_13510 IPR031316 BRM88_13510 BRM88_13510 IPR035890 BRM88_13510 BRM88_13515 IPR013974 SAF domain BRM88_13515 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal BRM88_13520 IPR001789 Signal transduction response regulator, receiver domain BRM88_13520 IPR002545 CheW-like protein BRM88_13520 IPR011006 CheY-like superfamily BRM88_13520 IPR024181 Chemotaxis response regulator CheV BRM88_13520 IPR036061 BRM88_13520 BRM88_13525 IPR001444 Flagellar basal body rod protein, N-terminal BRM88_13525 IPR006300 Flagellar basal-body rod protein FlgB BRM88_13525 IPR019776 Flagellar basal body rod protein, conserved site BRM88_13530 IPR001444 Flagellar basal body rod protein, N-terminal BRM88_13530 IPR006299 Flagellar basal-body rod protein FlgC BRM88_13530 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BRM88_13530 IPR019776 Flagellar basal body rod protein, conserved site BRM88_13535 IPR005648 Flagellar hook capping protein BRM88_13535 IPR025963 FlgD Tudor-like domain BRM88_13535 IPR025965 FlgD Ig-like domain BRM88_13540 IPR001444 Flagellar basal body rod protein, N-terminal BRM88_13540 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BRM88_13540 IPR011491 Flagellar basal body FlaE BRM88_13540 IPR019776 Flagellar basal body rod protein, conserved site BRM88_13540 IPR020013 Fagellar hook-basal body protein, FlgE/F/G BRM88_13540 IPR037058 BRM88_13540 BRM88_13540 IPR037925 BRM88_13540 BRM88_13545 IPR001444 Flagellar basal body rod protein, N-terminal BRM88_13545 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BRM88_13545 IPR012836 Flagellar basal-body rod FlgF BRM88_13545 IPR020013 Fagellar hook-basal body protein, FlgE/F/G BRM88_13545 IPR037925 BRM88_13545 BRM88_13555 IPR001444 Flagellar basal body rod protein, N-terminal BRM88_13555 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BRM88_13555 IPR012834 Flagellar basal-body rod FlgG BRM88_13555 IPR019776 Flagellar basal body rod protein, conserved site BRM88_13555 IPR020013 Fagellar hook-basal body protein, FlgE/F/G BRM88_13555 IPR037925 BRM88_13555 BRM88_13560 IPR000527 Flagellar L-ring protein BRM88_13565 IPR001782 Flagellar P-ring protein BRM88_13570 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain BRM88_13570 IPR013377 Flagellar rod assembly protein/muramidase FlgJ BRM88_13570 IPR019301 Flagellar protein FlgJ, N-terminal BRM88_13575 IPR001444 Flagellar basal body rod protein, N-terminal BRM88_13575 IPR002371 Flagellar hook-associated protein, FlgK BRM88_13575 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BRM88_13580 IPR001029 Flagellin, D0/D1 domain BRM88_13580 IPR013384 Flagellar hook-associated protein 3 BRM88_13585 IPR001029 Flagellin, D0/D1 domain BRM88_13585 IPR001492 Flagellin BRM88_13590 IPR003481 Flagellar hook-associated protein 2, N-terminal BRM88_13590 IPR010809 Flagellar hook-associated 2, C-terminal BRM88_13590 IPR010810 Flagellin hook, IN motif BRM88_13595 IPR003713 Flagellar protein FliS BRM88_13595 IPR036584 BRM88_13595 BRM88_13605 IPR031800 BRM88_13605 BRM88_13610 IPR000792 Transcription regulator LuxR, C-terminal BRM88_13610 IPR001789 Signal transduction response regulator, receiver domain BRM88_13610 IPR011006 CheY-like superfamily BRM88_13610 IPR016032 Signal transduction response regulator, C-terminal effector BRM88_13615 IPR000394 RNA polymerase sigma factor 54 BRM88_13615 IPR007046 RNA polymerase sigma factor 54, core-binding BRM88_13615 IPR007634 RNA polymerase sigma factor 54, DNA-binding BRM88_13615 IPR038709 BRM88_13615 BRM88_13620 IPR001789 Signal transduction response regulator, receiver domain BRM88_13620 IPR011006 CheY-like superfamily BRM88_13625 IPR002078 RNA polymerase sigma factor 54 interaction domain BRM88_13625 IPR002197 DNA binding HTH domain, Fis-type BRM88_13625 IPR003593 AAA+ ATPase domain BRM88_13625 IPR009057 Homeodomain-like BRM88_13625 IPR010518 Flagellar regulatory FleQ BRM88_13625 IPR011006 CheY-like superfamily BRM88_13625 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BRM88_13625 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BRM88_13625 IPR025944 Sigma-54 interaction domain, conserved site BRM88_13625 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_13630 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BRM88_13630 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BRM88_13630 IPR015424 Pyridoxal phosphate-dependent transferase BRM88_13635 IPR036736 BRM88_13635 BRM88_13640 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal BRM88_13640 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BRM88_13640 IPR016039 Thiolase-like BRM88_13645 IPR002347 Glucose/ribitol dehydrogenase BRM88_13645 IPR036291 BRM88_13645 BRM88_13650 IPR002347 Glucose/ribitol dehydrogenase BRM88_13650 IPR036291 BRM88_13650 BRM88_13655 IPR001451 Bacterial transferase hexapeptide repeat BRM88_13655 IPR011004 Trimeric LpxA-like BRM88_13660 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit BRM88_13660 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain BRM88_13660 IPR017941 Rieske [2Fe-2S] iron-sulphur domain BRM88_13660 IPR036922 BRM88_13660 BRM88_13665 IPR001451 Bacterial transferase hexapeptide repeat BRM88_13665 IPR011004 Trimeric LpxA-like BRM88_13670 IPR006342 Methyltransferase FkbM BRM88_13670 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_13675 IPR001173 Glycosyltransferase 2-like BRM88_13675 IPR029044 Nucleotide-diphospho-sugar transferases BRM88_13685 IPR001624 Flagellar hook-basal body complex protein FliE BRM88_13690 IPR000067 Flagellar M-ring protein FliF BRM88_13690 IPR006182 Secretory protein YscJ/FliF BRM88_13690 IPR013556 Flagellar M-ring C-terminal BRM88_13695 IPR000090 Flagellar motor switch protein FliG BRM88_13695 IPR011002 Flagellar motor switch protein FliG, alpha-helical BRM88_13695 IPR023087 BRM88_13695 BRM88_13695 IPR028263 Flagellar motor switch protein FliG, N-terminal domain BRM88_13695 IPR032779 BRM88_13695 BRM88_13700 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE BRM88_13705 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BRM88_13705 IPR003593 AAA+ ATPase domain BRM88_13705 IPR005714 ATPase, type III secretion system, FliI/YscN BRM88_13705 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_13710 IPR012823 Flagellar export FliJ BRM88_13715 IPR001635 Flagellar hook-length control protein FliK BRM88_13715 IPR021136 Flagellar hook-length control protein-like, C-terminal BRM88_13715 IPR038610 BRM88_13715 BRM88_13720 IPR005503 Flagellar basal body-associated protein FliL BRM88_13725 IPR001543 Surface presentation of antigen (SpoA) BRM88_13725 IPR001689 Flagellar motor switch protein FliM BRM88_13725 IPR028976 CheC-like domain BRM88_13725 IPR036429 BRM88_13725 BRM88_13730 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb BRM88_13730 IPR001543 Surface presentation of antigen (SpoA) BRM88_13730 IPR012826 Flagellar motor switch FliN BRM88_13730 IPR036429 BRM88_13730 BRM88_13735 IPR022781 Flagellar biosynthesis protein, FliO BRM88_13740 IPR005837 Flagellar transport protein FliP BRM88_13740 IPR005838 Type III secretion system inner membrane P protein BRM88_13750 IPR002191 Bacterial export protein family 3 BRM88_13755 IPR002010 Type III secretion system inner membrane R protein BRM88_13755 IPR006303 Flagellar biosynthesis protein FliR BRM88_13760 IPR000160 GGDEF domain BRM88_13760 IPR011110 Two component regulator propeller BRM88_13760 IPR011123 Two component regulator three Y BRM88_13760 IPR013783 Immunoglobulin-like fold BRM88_13760 IPR015943 WD40/YVTN repeat-like-containing domain BRM88_13760 IPR029787 Nucleotide cyclase BRM88_13765 IPR000160 GGDEF domain BRM88_13765 IPR011123 Two component regulator three Y BRM88_13765 IPR013783 Immunoglobulin-like fold BRM88_13765 IPR015943 WD40/YVTN repeat-like-containing domain BRM88_13765 IPR029787 Nucleotide cyclase BRM88_13770 IPR000160 GGDEF domain BRM88_13770 IPR001633 EAL domain BRM88_13770 IPR005330 MHYT BRM88_13770 IPR029787 Nucleotide cyclase BRM88_13770 IPR035919 BRM88_13770 BRM88_13775 IPR006135 Type III secretion system substrate exporter BRM88_13775 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB BRM88_13775 IPR029025 Type III secretion system substrate exporter, C-terminal BRM88_13780 IPR001712 Type III secretion system FHIPEP BRM88_13780 IPR006301 Flagellar biosynthesis protein FlhA BRM88_13785 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain BRM88_13785 IPR003593 AAA+ ATPase domain BRM88_13785 IPR020006 Signal-recognition particle (SRP)-type GTPase BRM88_13785 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_13790 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain BRM88_13790 IPR025501 ATP binding protein MinD BRM88_13790 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_13795 IPR000943 RNA polymerase sigma-70 BRM88_13795 IPR007624 RNA polymerase sigma-70 region 3 BRM88_13795 IPR007627 RNA polymerase sigma-70 region 2 BRM88_13795 IPR007630 RNA polymerase sigma-70 region 4 BRM88_13795 IPR012845 RNA polymerase sigma factor, FliA/WhiG BRM88_13795 IPR013324 RNA polymerase sigma factor, region 3/4 BRM88_13795 IPR013325 RNA polymerase sigma factor, region 2 BRM88_13795 IPR014284 RNA polymerase sigma-70 like domain BRM88_13795 IPR028617 RNA polymerase sigma factor FliA BRM88_13800 IPR001789 Signal transduction response regulator, receiver domain BRM88_13800 IPR011006 CheY-like superfamily BRM88_13805 IPR007439 Chemotaxis phosphatase, CheZ BRM88_13810 IPR002545 CheW-like protein BRM88_13810 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_13810 IPR004105 Histidine kinase CheA-like, homodimeric domain BRM88_13810 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_13810 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BRM88_13810 IPR036061 BRM88_13810 BRM88_13810 IPR036097 BRM88_13810 BRM88_13810 IPR036641 BRM88_13810 BRM88_13810 IPR036890 BRM88_13810 BRM88_13810 IPR037006 BRM88_13810 BRM88_13840 IPR012337 Ribonuclease H-like domain BRM88_13840 IPR038721 BRM88_13840 BRM88_13850 IPR002559 Transposase, IS4-like BRM88_13850 IPR008490 Transposase InsH, N-terminal BRM88_13855 IPR024289 Domain of unknown function DUF3828 BRM88_13860 IPR006530 YD repeat BRM88_13860 IPR011043 Galactose oxidase/kelch, beta-propeller BRM88_13860 IPR015915 Kelch-type beta propeller BRM88_13860 IPR022385 Rhs repeat-associated core BRM88_13860 IPR031325 BRM88_13860 BRM88_13870 IPR002559 Transposase, IS4-like BRM88_13870 IPR008490 Transposase InsH, N-terminal BRM88_13880 IPR002559 Transposase, IS4-like BRM88_13880 IPR008490 Transposase InsH, N-terminal BRM88_13915 IPR009056 Cytochrome c-like domain BRM88_13915 IPR036909 BRM88_13915 BRM88_13920 IPR009056 Cytochrome c-like domain BRM88_13920 IPR036909 BRM88_13920 BRM88_13965 IPR024442 Transposase, zinc-ribbon BRM88_13965 IPR024445 Transposase, ISXO2-like BRM88_13970 IPR012337 Ribonuclease H-like domain BRM88_13970 IPR038721 BRM88_13970 BRM88_13975 IPR003439 ABC transporter-like BRM88_13975 IPR003593 AAA+ ATPase domain BRM88_13975 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC BRM88_13975 IPR017871 ABC transporter, conserved site BRM88_13975 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_13975 IPR036640 BRM88_13975 BRM88_13980 IPR003439 ABC transporter-like BRM88_13980 IPR003593 AAA+ ATPase domain BRM88_13980 IPR011527 ABC transporter type 1, transmembrane domain BRM88_13980 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD BRM88_13980 IPR017871 ABC transporter, conserved site BRM88_13980 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_13980 IPR036640 BRM88_13980 BRM88_13995 IPR001584 Integrase, catalytic core BRM88_13995 IPR012337 Ribonuclease H-like domain BRM88_13995 IPR025246 Transposase IS30-like HTH domain BRM88_13995 IPR036397 BRM88_13995 BRM88_14005 IPR002585 Cytochrome d ubiquinol oxidase, subunit I BRM88_14010 IPR024442 Transposase, zinc-ribbon BRM88_14010 IPR024445 Transposase, ISXO2-like BRM88_14020 IPR011724 Cyd operon protein YbgT BRM88_14020 IPR012994 Membrane bound YbgT-like BRM88_14030 IPR011701 Major facilitator superfamily BRM88_14030 IPR036259 BRM88_14030 BRM88_14035 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain BRM88_14035 IPR005674 CocE/Serine esterase BRM88_14035 IPR008979 Galactose-binding domain-like BRM88_14035 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal BRM88_14035 IPR029058 Alpha/Beta hydrolase fold BRM88_14040 IPR000965 Gamma-glutamyl phosphate reductase GPR BRM88_14040 IPR012134 Glutamate-5-semialdehyde dehydrogenase BRM88_14040 IPR015590 Aldehyde dehydrogenase domain BRM88_14040 IPR016161 Aldehyde/histidinol dehydrogenase BRM88_14040 IPR016162 Aldehyde dehydrogenase, N-terminal BRM88_14040 IPR016163 Aldehyde dehydrogenase, C-terminal BRM88_14040 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site BRM88_14045 IPR001048 Aspartate/glutamate/uridylate kinase BRM88_14045 IPR001057 Glutamate/acetylglutamate kinase BRM88_14045 IPR002478 PUA domain BRM88_14045 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase BRM88_14045 IPR011529 Glutamate 5-kinase BRM88_14045 IPR015947 PUA-like domain BRM88_14045 IPR019797 Glutamate 5-kinase, conserved site BRM88_14045 IPR036393 BRM88_14045 BRM88_14045 IPR036974 BRM88_14045 BRM88_14050 IPR005545 YCII-related BRM88_14050 IPR011008 Dimeric alpha-beta barrel BRM88_14055 IPR011051 RmlC-like cupin domain BRM88_14055 IPR013096 Cupin 2, conserved barrel BRM88_14055 IPR014710 RmlC-like jelly roll fold BRM88_14060 IPR000362 Fumarate lyase family BRM88_14060 IPR008948 L-Aspartase-like BRM88_14060 IPR009049 Argininosuccinate lyase BRM88_14060 IPR020557 Fumarate lyase, conserved site BRM88_14060 IPR022761 Fumarate lyase, N-terminal BRM88_14060 IPR024083 Fumarase/histidase, N-terminal BRM88_14065 IPR000534 Semialdehyde dehydrogenase, NAD-binding BRM88_14065 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 BRM88_14065 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site BRM88_14065 IPR036291 BRM88_14065 BRM88_14075 IPR001048 Aspartate/glutamate/uridylate kinase BRM88_14075 IPR004662 Acetylglutamate kinase BRM88_14075 IPR006855 Domain of unknown function DUF619 BRM88_14075 IPR011242 N-acetylglutamate kinase, DUF619 domain-containing BRM88_14075 IPR016181 Acyl-CoA N-acyltransferase BRM88_14075 IPR036393 BRM88_14075 BRM88_14080 IPR002933 Peptidase M20 BRM88_14080 IPR011650 Peptidase M20, dimerisation domain BRM88_14080 IPR036264 BRM88_14080 BRM88_14085 IPR000182 GNAT domain BRM88_14085 IPR016181 Acyl-CoA N-acyltransferase BRM88_14090 IPR001518 Argininosuccinate synthase BRM88_14090 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_14090 IPR018223 Argininosuccinate synthase, conserved site BRM88_14090 IPR023434 Argininosuccinate synthase, type 1 subfamily BRM88_14090 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body BRM88_14095 IPR002082 Aspartate carbamoyltransferase BRM88_14095 IPR006130 Aspartate/ornithine carbamoyltransferase BRM88_14095 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain BRM88_14095 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding BRM88_14095 IPR036901 BRM88_14095 BRM88_14105 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding BRM88_14105 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_14105 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR BRM88_14105 IPR015803 Cysteine-tRNA ligase BRM88_14105 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase BRM88_14105 IPR032678 BRM88_14105 BRM88_14110 IPR003808 Fe-S metabolism associated domain, SufE-like BRM88_14115 IPR010290 Transmembrane secretion effector BRM88_14115 IPR036259 BRM88_14115 BRM88_14120 IPR005151 Tail specific protease BRM88_14120 IPR029045 ClpP/crotonase-like domain BRM88_14125 IPR000962 Zinc finger, DksA/TraR C4-type BRM88_14125 IPR012784 RNA polymerase-binding transcription factor DksA BRM88_14125 IPR037187 BRM88_14125 BRM88_14130 IPR002696 Putative membrane protein insertion efficiency factor BRM88_14135 IPR002195 Dihydroorotase, conserved site BRM88_14135 IPR006680 Amidohydrolase 1 BRM88_14135 IPR011059 Metal-dependent hydrolase, composite domain BRM88_14135 IPR032466 BRM88_14135 BRM88_14140 IPR011055 Duplicated hybrid motif BRM88_14140 IPR016047 Peptidase M23 BRM88_14165 IPR009057 Homeodomain-like BRM88_14165 IPR025959 Winged helix-turn helix domain BRM88_14165 IPR038717 BRM88_14165 BRM88_14180 IPR012337 Ribonuclease H-like domain BRM88_14180 IPR038721 BRM88_14180 BRM88_14185 IPR002559 Transposase, IS4-like BRM88_14185 IPR008490 Transposase InsH, N-terminal BRM88_14190 IPR012337 Ribonuclease H-like domain BRM88_14190 IPR038721 BRM88_14190 BRM88_14200 IPR000070 Pectinesterase, catalytic BRM88_14200 IPR011050 Pectin lyase fold/virulence factor BRM88_14200 IPR012334 Pectin lyase fold BRM88_14200 IPR033131 BRM88_14200 BRM88_14215 IPR000743 Glycoside hydrolase, family 28 BRM88_14215 IPR011050 Pectin lyase fold/virulence factor BRM88_14215 IPR012334 Pectin lyase fold BRM88_14225 IPR006346 2-phosphoglycolate phosphatase, prokaryotic BRM88_14225 IPR006439 HAD hydrolase, subfamily IA BRM88_14225 IPR023198 Phosphoglycolate phosphatase, domain 2 BRM88_14225 IPR023214 HAD-like domain BRM88_14225 IPR036412 BRM88_14225 BRM88_14225 IPR037512 BRM88_14225 BRM88_14230 IPR010233 Ubiquinone biosynthesis O-methyltransferase BRM88_14230 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_14235 IPR006680 Amidohydrolase 1 BRM88_14235 IPR011059 Metal-dependent hydrolase, composite domain BRM88_14235 IPR032466 BRM88_14235 BRM88_14245 IPR001059 Translation elongation factor P/YeiP, central BRM88_14245 IPR008991 Translation protein SH3-like domain BRM88_14245 IPR011768 Translation elongation factor P BRM88_14245 IPR012340 Nucleic acid-binding, OB-fold BRM88_14245 IPR013185 Translation elongation factor, KOW-like BRM88_14245 IPR013852 Translation elongation factor P/YeiP, conserved site BRM88_14245 IPR014722 Ribosomal protein L2 domain 2 BRM88_14245 IPR015365 Elongation factor P, C-terminal BRM88_14245 IPR020599 Translation elongation factor P/YeiP BRM88_14250 IPR003739 Lysine-2,3-aminomutase family BRM88_14250 IPR013785 Aldolase-type TIM barrel BRM88_14250 IPR022462 Lysine-2,3-aminomutase-like BRM88_14255 IPR000160 GGDEF domain BRM88_14255 IPR001633 EAL domain BRM88_14255 IPR003660 HAMP linker domain BRM88_14255 IPR029151 Periplasmic sensor domain-like BRM88_14255 IPR029787 Nucleotide cyclase BRM88_14255 IPR033463 BRM88_14255 BRM88_14255 IPR035919 BRM88_14255 BRM88_14265 IPR001537 tRNA/rRNA methyltransferase, SpoU type BRM88_14265 IPR004384 RNA methyltransferase TrmH, group 1 BRM88_14265 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BRM88_14265 IPR029028 Alpha/beta knot methyltransferases BRM88_14270 IPR000760 Inositol monophosphatase BRM88_14270 IPR020550 Inositol monophosphatase, conserved site BRM88_14270 IPR020583 Inositol monophosphatase, metal-binding site BRM88_14270 IPR022337 Inositol monophosphatase, SuhB BRM88_14275 IPR001189 Manganese/iron superoxide dismutase BRM88_14275 IPR019831 Manganese/iron superoxide dismutase, N-terminal BRM88_14275 IPR019832 Manganese/iron superoxide dismutase, C-terminal BRM88_14275 IPR019833 Manganese/iron superoxide dismutase, binding site BRM88_14275 IPR036314 BRM88_14275 BRM88_14275 IPR036324 BRM88_14275 BRM88_14280 IPR000026 Guanine-specific ribonuclease N1/T1 BRM88_14280 IPR016191 Ribonuclease/ribotoxin BRM88_14285 IPR000468 Barstar (barnase inhibitor) BRM88_14285 IPR035905 BRM88_14285 BRM88_14300 IPR003439 ABC transporter-like BRM88_14300 IPR003593 AAA+ ATPase domain BRM88_14300 IPR017871 ABC transporter, conserved site BRM88_14300 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_14300 IPR032524 BRM88_14300 BRM88_14300 IPR032781 BRM88_14300 BRM88_14300 IPR037118 BRM88_14300 BRM88_14305 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site BRM88_14305 IPR001650 Helicase, C-terminal BRM88_14305 IPR003593 AAA+ ATPase domain BRM88_14305 IPR005580 DbpA, RNA-binding BRM88_14305 IPR011545 DEAD/DEAH box helicase domain BRM88_14305 IPR012677 Nucleotide-binding, alpha-beta plait BRM88_14305 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BRM88_14305 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_14310 IPR000836 Phosphoribosyltransferase domain BRM88_14310 IPR005764 Adenine phosphoribosyl transferase BRM88_14310 IPR029057 Phosphoribosyltransferase-like BRM88_14315 IPR003846 Uncharacterised protein family UPF0061 BRM88_14320 IPR002018 Carboxylesterase, type B BRM88_14320 IPR029058 Alpha/Beta hydrolase fold BRM88_14325 IPR004045 Glutathione S-transferase, N-terminal BRM88_14325 IPR004046 Glutathione S-transferase, C-terminal BRM88_14325 IPR036249 BRM88_14325 BRM88_14325 IPR036282 BRM88_14325 BRM88_14330 IPR002059 Cold-shock protein, DNA-binding BRM88_14330 IPR011129 Cold shock protein BRM88_14330 IPR012156 Cold shock, CspA BRM88_14330 IPR012340 Nucleic acid-binding, OB-fold BRM88_14330 IPR019844 Cold-shock conserved site BRM88_14335 IPR003791 Protein of unknown function UPF0178 BRM88_14340 IPR009822 YaeQ BRM88_14340 IPR011335 Restriction endonuclease type II-like BRM88_14340 IPR038590 BRM88_14340 BRM88_14345 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like BRM88_14345 IPR023166 HI0933 insert-like domain BRM88_14345 IPR036188 BRM88_14345 BRM88_14350 IPR000014 PAS domain BRM88_14350 IPR000160 GGDEF domain BRM88_14350 IPR001633 EAL domain BRM88_14350 IPR011006 CheY-like superfamily BRM88_14350 IPR029787 Nucleotide cyclase BRM88_14350 IPR035919 BRM88_14350 BRM88_14350 IPR035965 BRM88_14350 BRM88_14355 IPR001915 Peptidase M48 BRM88_14355 IPR022919 Peptidase M48, protease HtpX, putative BRM88_14360 IPR000924 Glutamyl/glutaminyl-tRNA synthetase BRM88_14360 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_14360 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain BRM88_14360 IPR022380 Glutamyl-Q tRNA(Asp) synthetase BRM88_14365 IPR002347 Glucose/ribitol dehydrogenase BRM88_14365 IPR011283 Acetoacetyl-CoA reductase BRM88_14365 IPR020904 Short-chain dehydrogenase/reductase, conserved site BRM88_14365 IPR036291 BRM88_14365 BRM88_14370 IPR007897 PHB accumulation regulatory BRM88_14370 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR BRM88_14370 IPR012909 PHA accumulation regulator DNA-binding, N-terminal BRM88_14380 IPR002816 Pheromone shutdown, TraB BRM88_14385 IPR012467 Protein of unknown function DUF1684 BRM88_14390 IPR002099 DNA mismatch repair protein family BRM88_14390 IPR013507 DNA mismatch repair protein, C-terminal BRM88_14390 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BRM88_14390 IPR014762 DNA mismatch repair, conserved site BRM88_14390 IPR014790 MutL, C-terminal, dimerisation BRM88_14390 IPR020568 Ribosomal protein S5 domain 2-type fold BRM88_14390 IPR020667 DNA mismatch repair protein, MutL BRM88_14390 IPR036890 BRM88_14390 BRM88_14390 IPR037198 BRM88_14390 BRM88_14395 IPR002508 Cell wall hydrolase/autolysin, catalytic BRM88_14395 IPR021731 AMIN domain BRM88_14400 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE BRM88_14400 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_14405 IPR000631 YjeF C-terminal domain BRM88_14405 IPR004443 YjeF N-terminal domain BRM88_14405 IPR017953 Carbohydrate kinase, predicted, conserved site BRM88_14405 IPR029056 Ribokinase-like BRM88_14405 IPR030677 BRM88_14405 BRM88_14405 IPR036652 BRM88_14405 BRM88_14410 IPR004453 Epoxyqueuosine reductase QueG BRM88_14410 IPR013542 Domain of unknown function DUF1730 BRM88_14410 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BRM88_14415 IPR003753 Exonuclease VII, large subunit BRM88_14415 IPR020579 Exonuclease VII, large subunit, C-terminal BRM88_14415 IPR025824 OB-fold nucleic acid binding domain BRM88_14420 IPR010333 Bacterial virulence BRM88_14420 IPR011225 Type IV secretory pathway, VirJ component BRM88_14420 IPR029058 Alpha/Beta hydrolase fold BRM88_14430 IPR005532 Formylglycine-generating sulphatase enzyme domain BRM88_14430 IPR016187 C-type lectin fold BRM88_14445 IPR002121 HRDC domain BRM88_14445 IPR002562 3'-5' exonuclease domain BRM88_14445 IPR006292 Ribonuclease D BRM88_14445 IPR010997 HRDC-like BRM88_14445 IPR012337 Ribonuclease H-like domain BRM88_14445 IPR036397 BRM88_14445 BRM88_14455 IPR014144 DNA ligase D, 3'-phosphoesterase domain BRM88_14465 IPR001801 Histone-like protein H-NS BRM88_14465 IPR027444 Histone-like protein H-NS, C-terminal domain BRM88_14480 IPR012337 Ribonuclease H-like domain BRM88_14480 IPR036397 BRM88_14480 BRM88_14495 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family BRM88_14495 IPR035093 BRM88_14495 BRM88_14500 IPR002145 Ribbon-helix-helix protein, copG BRM88_14500 IPR010985 Ribbon-helix-helix BRM88_14500 IPR013321 Arc-type ribbon-helix-helix BRM88_14510 IPR002145 Ribbon-helix-helix protein, copG BRM88_14515 IPR001207 Transposase, mutator type BRM88_14525 IPR024442 Transposase, zinc-ribbon BRM88_14525 IPR024445 Transposase, ISXO2-like BRM88_14550 IPR021732 Protein of unknown function DUF3301 BRM88_14560 IPR007481 Stringent starvation protein B BRM88_14560 IPR036760 BRM88_14560 BRM88_14565 IPR004045 Glutathione S-transferase, N-terminal BRM88_14565 IPR004046 Glutathione S-transferase, C-terminal BRM88_14565 IPR036249 BRM88_14565 BRM88_14565 IPR036282 BRM88_14565 BRM88_14570 IPR002326 Cytochrome c1 BRM88_14570 IPR036909 BRM88_14570 BRM88_14575 IPR005797 Cytochrome b/b6, N-terminal BRM88_14575 IPR005798 Cytochrome b/b6, C-terminal BRM88_14575 IPR016174 Di-haem cytochrome, transmembrane BRM88_14575 IPR027387 Cytochrome b/b6-like domain BRM88_14575 IPR030689 BRM88_14575 BRM88_14575 IPR036150 BRM88_14575 BRM88_14580 IPR005805 Rieske iron-sulphur protein, C-terminal BRM88_14580 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit BRM88_14580 IPR017941 Rieske [2Fe-2S] iron-sulphur domain BRM88_14580 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal BRM88_14580 IPR036922 BRM88_14580 BRM88_14590 IPR000189 Prokaryotic transglycosylase, active site BRM88_14590 IPR008258 Lytic transglycosylase-like SLT domain BRM88_14590 IPR023346 Lysozyme-like domain BRM88_14610 IPR002792 TRAM domain BRM88_14610 IPR005839 Methylthiotransferase BRM88_14610 IPR006463 tRNA-i(6)A37 modification enzyme MiaB BRM88_14610 IPR006638 Elongator protein 3/MiaB/NifB BRM88_14610 IPR007197 Radical SAM BRM88_14610 IPR013848 Methylthiotransferase, N-terminal BRM88_14610 IPR020612 Methylthiotransferase, conserved site BRM88_14610 IPR023404 Radical SAM, alpha/beta horseshoe BRM88_14610 IPR038135 BRM88_14610 BRM88_14615 IPR003714 PhoH-like protein BRM88_14615 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_14625 IPR002036 Endoribonuclease YbeY BRM88_14625 IPR020549 Endoribonuclease YbeY, conserved site BRM88_14625 IPR023091 Metalloprotease catalytic domain, predicted BRM88_14635 IPR000644 CBS domain BRM88_14635 IPR005170 Transporter-associated domain BRM88_14635 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 BRM88_14635 IPR036318 BRM88_14635 BRM88_14640 IPR025178 Domain of unknown function DUF4105 BRM88_14645 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB BRM88_14650 IPR015590 Aldehyde dehydrogenase domain BRM88_14650 IPR016160 Aldehyde dehydrogenase, cysteine active site BRM88_14650 IPR016161 Aldehyde/histidinol dehydrogenase BRM88_14650 IPR016162 Aldehyde dehydrogenase, N-terminal BRM88_14650 IPR016163 Aldehyde dehydrogenase, C-terminal BRM88_14660 IPR000515 MetI-like domain BRM88_14660 IPR035906 BRM88_14660 BRM88_14665 IPR000515 MetI-like domain BRM88_14665 IPR035906 BRM88_14665 BRM88_14670 IPR003439 ABC transporter-like BRM88_14670 IPR003593 AAA+ ATPase domain BRM88_14670 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit BRM88_14670 IPR008995 Molybdate/tungstate binding, C-terminal BRM88_14670 IPR013611 Transport-associated OB, type 2 BRM88_14670 IPR017871 ABC transporter, conserved site BRM88_14670 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_14675 IPR003423 Outer membrane efflux protein BRM88_14675 IPR010131 RND efflux system, outer membrane lipoprotein, NodT BRM88_14680 IPR004638 Drug resistance transporter EmrB/QacA subfamily BRM88_14680 IPR011701 Major facilitator superfamily BRM88_14680 IPR036259 BRM88_14680 BRM88_14685 IPR003997 RTX secretion protein D, Gram-negative bacteria BRM88_14685 IPR032317 BRM88_14685 BRM88_14685 IPR039562 BRM88_14685 BRM88_14690 IPR012337 Ribonuclease H-like domain BRM88_14690 IPR038721 BRM88_14690 BRM88_14700 IPR008146 Glutamine synthetase, catalytic domain BRM88_14700 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain BRM88_14700 IPR027303 Glutamine synthetase, glycine-rich site BRM88_14700 IPR036651 BRM88_14700 BRM88_14710 IPR008146 Glutamine synthetase, catalytic domain BRM88_14710 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain BRM88_14710 IPR027303 Glutamine synthetase, glycine-rich site BRM88_14710 IPR036651 BRM88_14710 BRM88_14715 IPR006076 FAD dependent oxidoreductase BRM88_14715 IPR036188 BRM88_14715 BRM88_14720 IPR000160 GGDEF domain BRM88_14720 IPR001789 Signal transduction response regulator, receiver domain BRM88_14720 IPR011006 CheY-like superfamily BRM88_14720 IPR029787 Nucleotide cyclase BRM88_14725 IPR005828 General substrate transporter BRM88_14725 IPR011701 Major facilitator superfamily BRM88_14725 IPR036259 BRM88_14725 BRM88_14730 IPR036388 BRM88_14730 BRM88_14730 IPR036390 BRM88_14730 BRM88_14735 IPR006656 Molybdopterin oxidoreductase BRM88_14735 IPR006657 Molydopterin dinucleotide-binding domain BRM88_14735 IPR009010 Aspartate decarboxylase-like domain BRM88_14735 IPR010046 Oxidoreductase alpha (molybdopterin) subunit BRM88_14740 IPR003786 Protein FdhD BRM88_14740 IPR016193 Cytidine deaminase-like BRM88_14745 IPR011701 Major facilitator superfamily BRM88_14745 IPR036259 BRM88_14745 BRM88_14765 IPR005814 Aminotransferase class-III BRM88_14765 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BRM88_14765 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BRM88_14765 IPR015424 Pyridoxal phosphate-dependent transferase BRM88_14770 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_14780 IPR007383 Protein of unknown function DUF445 BRM88_14785 IPR000014 PAS domain BRM88_14785 IPR001610 PAC motif BRM88_14785 IPR001789 Signal transduction response regulator, receiver domain BRM88_14785 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_14785 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_14785 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_14785 IPR006189 CHASE BRM88_14785 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BRM88_14785 IPR011006 CheY-like superfamily BRM88_14785 IPR013656 PAS fold-4 BRM88_14785 IPR035965 BRM88_14785 BRM88_14785 IPR036097 BRM88_14785 BRM88_14785 IPR036641 BRM88_14785 BRM88_14785 IPR036890 BRM88_14785 BRM88_14790 IPR001789 Signal transduction response regulator, receiver domain BRM88_14790 IPR003607 HD/PDEase domain BRM88_14790 IPR011006 CheY-like superfamily BRM88_14795 IPR002559 Transposase, IS4-like BRM88_14795 IPR008490 Transposase InsH, N-terminal BRM88_14805 IPR007780 Bacterial NAD-glutamate dehydrogenase BRM88_14805 IPR024727 Bacterial NAD-glutamate dehydrogenase, N-terminal BRM88_14805 IPR028971 NAD-glutamate dehydrogenase BRM88_14805 IPR036291 BRM88_14805 BRM88_14810 IPR001647 DNA-binding HTH domain, TetR-type BRM88_14810 IPR009057 Homeodomain-like BRM88_14810 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal BRM88_14810 IPR036271 BRM88_14810 BRM88_14815 IPR006143 RND efflux pump, membrane fusion protein BRM88_14815 IPR032317 BRM88_14815 BRM88_14820 IPR001036 Acriflavin resistance protein BRM88_14820 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 BRM88_14820 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BRM88_14830 IPR024442 Transposase, zinc-ribbon BRM88_14830 IPR024445 Transposase, ISXO2-like BRM88_14845 IPR000032 Phosphocarrier HPr protein-like BRM88_14845 IPR000121 PEP-utilising enzyme, C-terminal BRM88_14845 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BRM88_14845 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BRM88_14845 IPR002178 PTS EIIA type-2 domain BRM88_14845 IPR006318 Phosphoenolpyruvate-utilising enzyme BRM88_14845 IPR008279 PEP-utilising enzyme, mobile domain BRM88_14845 IPR008731 Phosphotransferase system, enzyme I N-terminal BRM88_14845 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain BRM88_14845 IPR016152 Phosphotransferase/anion transporter BRM88_14845 IPR018274 PEP-utilising enzyme, active site BRM88_14845 IPR023151 PEP-utilising enzyme, conserved site BRM88_14845 IPR035895 BRM88_14845 BRM88_14845 IPR036618 BRM88_14845 BRM88_14845 IPR036637 BRM88_14845 BRM88_14850 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BRM88_14850 IPR011611 Carbohydrate kinase PfkB BRM88_14850 IPR017583 Tagatose/fructose phosphokinase BRM88_14850 IPR029056 Ribokinase-like BRM88_14855 IPR003353 Phosphotransferase system, fructose-specific IIB subunit BRM88_14855 IPR003501 Phosphotransferase system, EIIB component, type 2/3 BRM88_14855 IPR006327 Phosphotransferase system, fructose IIC component BRM88_14855 IPR036095 BRM88_14855 BRM88_14860 IPR007049 Carbohydrate-selective porin OprB BRM88_14860 IPR038673 BRM88_14860 BRM88_14865 IPR002559 Transposase, IS4-like BRM88_14865 IPR008490 Transposase InsH, N-terminal BRM88_14875 IPR002559 Transposase, IS4-like BRM88_14875 IPR008490 Transposase InsH, N-terminal BRM88_14925 IPR025391 Domain of unknown function DUF4123 BRM88_14930 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein BRM88_14930 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset BRM88_14930 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal BRM88_14930 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain BRM88_14930 IPR037026 BRM88_14930 BRM88_14945 IPR005042 Avirulence protein PthA-related, Xanthomonas species BRM88_14950 IPR002559 Transposase, IS4-like BRM88_14950 IPR008490 Transposase InsH, N-terminal BRM88_14960 IPR012337 Ribonuclease H-like domain BRM88_14960 IPR038721 BRM88_14960 BRM88_14965 IPR009534 Protein of unknown function DUF1153 BRM88_14965 IPR010921 Trp repressor/replication initiator BRM88_14965 IPR036388 BRM88_14965 BRM88_14975 IPR012337 Ribonuclease H-like domain BRM88_14975 IPR038721 BRM88_14975 BRM88_14990 IPR014944 Toxin SymE-like BRM88_15010 IPR032359 BRM88_15010 BRM88_15015 IPR002559 Transposase, IS4-like BRM88_15015 IPR008490 Transposase InsH, N-terminal BRM88_15030 IPR000531 TonB-dependent receptor, beta-barrel BRM88_15030 IPR010104 Bacterial TonB-dependent receptor BRM88_15030 IPR012910 TonB-dependent receptor, plug BRM88_15030 IPR037066 BRM88_15030 BRM88_15035 IPR007410 DR1885-like metal-binding protein BRM88_15035 IPR036182 BRM88_15035 BRM88_15045 IPR000531 TonB-dependent receptor, beta-barrel BRM88_15045 IPR012910 TonB-dependent receptor, plug BRM88_15045 IPR036942 BRM88_15045 BRM88_15045 IPR037066 BRM88_15045 BRM88_15055 IPR001189 Manganese/iron superoxide dismutase BRM88_15055 IPR019831 Manganese/iron superoxide dismutase, N-terminal BRM88_15055 IPR019832 Manganese/iron superoxide dismutase, C-terminal BRM88_15055 IPR019833 Manganese/iron superoxide dismutase, binding site BRM88_15055 IPR036314 BRM88_15055 BRM88_15055 IPR036324 BRM88_15055 BRM88_15060 IPR012910 TonB-dependent receptor, plug BRM88_15060 IPR037066 BRM88_15060 BRM88_15065 IPR000531 TonB-dependent receptor, beta-barrel BRM88_15065 IPR036942 BRM88_15065 BRM88_15075 IPR002898 MotA/TolQ/ExbB proton channel BRM88_15080 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal BRM88_15080 IPR025713 Motility protein B, N-terminal domain BRM88_15080 IPR036737 BRM88_15080 BRM88_15085 IPR025669 AAA domain BRM88_15085 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_15090 IPR002545 CheW-like protein BRM88_15090 IPR036061 BRM88_15090 BRM88_15095 IPR002645 STAS domain BRM88_15095 IPR036513 BRM88_15095 BRM88_15100 IPR001789 Signal transduction response regulator, receiver domain BRM88_15100 IPR011006 CheY-like superfamily BRM88_15105 IPR002545 CheW-like protein BRM88_15105 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_15105 IPR004105 Histidine kinase CheA-like, homodimeric domain BRM88_15105 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_15105 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BRM88_15105 IPR036061 BRM88_15105 BRM88_15105 IPR036097 BRM88_15105 BRM88_15105 IPR036641 BRM88_15105 BRM88_15105 IPR036890 BRM88_15105 BRM88_15105 IPR037006 BRM88_15105 BRM88_15125 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BRM88_15125 IPR004090 Chemotaxis methyl-accepting receptor BRM88_15135 IPR025737 MetA-pathway of phenol degradation, putative BRM88_15140 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BRM88_15140 IPR035965 BRM88_15140 BRM88_15145 IPR024442 Transposase, zinc-ribbon BRM88_15145 IPR024445 Transposase, ISXO2-like BRM88_15150 IPR003660 HAMP linker domain BRM88_15150 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BRM88_15150 IPR004090 Chemotaxis methyl-accepting receptor BRM88_15150 IPR024478 4HB MCP domain BRM88_15160 IPR003660 HAMP linker domain BRM88_15160 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BRM88_15160 IPR004090 Chemotaxis methyl-accepting receptor BRM88_15160 IPR007891 CHASE3 BRM88_15165 IPR003660 HAMP linker domain BRM88_15165 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BRM88_15165 IPR024478 4HB MCP domain BRM88_15170 IPR003660 HAMP linker domain BRM88_15170 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BRM88_15170 IPR024478 4HB MCP domain BRM88_15175 IPR003660 HAMP linker domain BRM88_15175 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BRM88_15175 IPR004090 Chemotaxis methyl-accepting receptor BRM88_15175 IPR024478 4HB MCP domain BRM88_15190 IPR009875 PilZ domain BRM88_15190 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal BRM88_15190 IPR012349 FMN-binding split barrel BRM88_15190 IPR023787 Type III secretion system flagellar brake protein YcgR BRM88_15195 IPR002545 CheW-like protein BRM88_15195 IPR036061 BRM88_15195 BRM88_15220 IPR003660 HAMP linker domain BRM88_15220 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BRM88_15220 IPR024478 4HB MCP domain BRM88_15220 IPR035965 BRM88_15220 BRM88_15225 IPR000780 MCP methyltransferase, CheR-type BRM88_15225 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal BRM88_15225 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal BRM88_15225 IPR026024 Chemotaxis protein methyltransferase CheR BRM88_15225 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_15225 IPR036804 BRM88_15225 BRM88_15230 IPR005659 Chemoreceptor glutamine deamidase CheD BRM88_15230 IPR011324 Cytotoxic necrotizing factor-like, catalytic BRM88_15230 IPR038592 BRM88_15230 BRM88_15235 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase BRM88_15235 IPR001789 Signal transduction response regulator, receiver domain BRM88_15235 IPR008248 Signal transduction response regulator, chemotaxis, CheB BRM88_15235 IPR011006 CheY-like superfamily BRM88_15235 IPR035909 BRM88_15235 BRM88_15240 IPR000014 PAS domain BRM88_15240 IPR000160 GGDEF domain BRM88_15240 IPR001610 PAC motif BRM88_15240 IPR001633 EAL domain BRM88_15240 IPR003018 GAF domain BRM88_15240 IPR012226 Oxygen sensor diguanylate cyclase/c-di-GMP phosphodiesterase BRM88_15240 IPR029016 GAF domain-like BRM88_15240 IPR029787 Nucleotide cyclase BRM88_15240 IPR035919 BRM88_15240 BRM88_15240 IPR035965 BRM88_15240 BRM88_15255 IPR000073 Alpha/beta hydrolase fold-1 BRM88_15255 IPR000639 Epoxide hydrolase-like BRM88_15255 IPR029058 Alpha/Beta hydrolase fold BRM88_15260 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha BRM88_15260 IPR004406 Aconitase B, bacterial BRM88_15260 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BRM88_15260 IPR015929 Aconitase B, N-terminal, bacterial BRM88_15260 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 BRM88_15260 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 BRM88_15260 IPR015933 Aconitase B, HEAT-like, bacterial BRM88_15260 IPR018136 Aconitase family, 4Fe-4S cluster binding site BRM88_15260 IPR036008 BRM88_15260 BRM88_15260 IPR036288 BRM88_15260 BRM88_15265 IPR002716 PIN domain BRM88_15265 IPR029060 PIN domain-like BRM88_15270 IPR007159 AbrB-like domain BRM88_15270 IPR037914 BRM88_15270 BRM88_15275 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel BRM88_15275 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha BRM88_15275 IPR006249 Aconitate/iron regulatory protein 2 BRM88_15275 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BRM88_15275 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 BRM88_15275 IPR018136 Aconitase family, 4Fe-4S cluster binding site BRM88_15275 IPR036008 BRM88_15275 BRM88_15285 IPR000873 AMP-dependent synthetase/ligase BRM88_15285 IPR020845 AMP-binding, conserved site BRM88_15285 IPR025110 AMP-binding enzyme C-terminal domain BRM88_15290 IPR001753 Crotonase superfamily BRM88_15290 IPR029045 ClpP/crotonase-like domain BRM88_15295 IPR001789 Signal transduction response regulator, receiver domain BRM88_15295 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_15295 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_15295 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_15295 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BRM88_15295 IPR011006 CheY-like superfamily BRM88_15295 IPR036097 BRM88_15295 BRM88_15295 IPR036641 BRM88_15295 BRM88_15295 IPR036890 BRM88_15295 BRM88_15305 IPR001789 Signal transduction response regulator, receiver domain BRM88_15305 IPR003607 HD/PDEase domain BRM88_15305 IPR006674 HD domain BRM88_15305 IPR011006 CheY-like superfamily BRM88_15310 IPR002313 Lysine-tRNA ligase, class II BRM88_15310 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) BRM88_15310 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BRM88_15310 IPR012340 Nucleic acid-binding, OB-fold BRM88_15310 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal BRM88_15320 IPR007492 LytTR DNA-binding domain BRM88_15320 IPR012379 LytTR MHYE transcriptional regulator, putative BRM88_15335 IPR032877 BRM88_15335 BRM88_15350 IPR012337 Ribonuclease H-like domain BRM88_15350 IPR025246 Transposase IS30-like HTH domain BRM88_15370 IPR001667 DDH domain BRM88_15370 IPR003156 DHHA1 domain BRM88_15370 IPR004610 Bacterial RecJ exonuclease BRM88_15370 IPR038763 BRM88_15370 BRM88_15375 IPR016631 Regulatory, RpfE BRM88_15380 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal BRM88_15380 IPR006359 Transcription elongation factor GreA BRM88_15380 IPR018151 Transcription elongation factor, GreA/GreB, conserved site BRM88_15380 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal BRM88_15380 IPR023459 Transcription elongation factor GreA/GreB family BRM88_15380 IPR028624 Transcription elongation factor GreA/GreB BRM88_15380 IPR036805 BRM88_15380 BRM88_15380 IPR036953 BRM88_15380 BRM88_15385 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain BRM88_15385 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain BRM88_15385 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain BRM88_15385 IPR006275 Carbamoyl-phosphate synthase, large subunit BRM88_15385 IPR011607 Methylglyoxal synthase-like domain BRM88_15385 IPR016185 Pre-ATP-grasp domain BRM88_15385 IPR036897 BRM88_15385 BRM88_15385 IPR036914 BRM88_15385 BRM88_15395 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain BRM88_15395 IPR006274 Carbamoyl-phosphate synthase, small subunit BRM88_15395 IPR017926 Glutamine amidotransferase BRM88_15395 IPR029062 Class I glutamine amidotransferase-like BRM88_15395 IPR036480 BRM88_15395 BRM88_15400 IPR000846 Dihydrodipicolinate reductase, N-terminal BRM88_15400 IPR022663 Dihydrodipicolinate reductase, C-terminal BRM88_15400 IPR022664 Dihydrodipicolinate reductase, conserved site BRM88_15400 IPR023940 Dihydrodipicolinate reductase, bacterial BRM88_15400 IPR036291 BRM88_15400 BRM88_15410 IPR005163 3-alpha domain BRM88_15410 IPR005302 Molybdenum cofactor sulfurase, C-terminal BRM88_15410 IPR011037 Pyruvate kinase-like, insert domain BRM88_15415 IPR004839 Aminotransferase, class I/classII BRM88_15415 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BRM88_15415 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BRM88_15415 IPR015424 Pyridoxal phosphate-dependent transferase BRM88_15435 IPR006073 GTP binding domain BRM88_15435 IPR011640 Ferrous iron transport protein B, C-terminal BRM88_15435 IPR011642 Nucleoside recognition Gate BRM88_15435 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_15435 IPR030389 BRM88_15435 BRM88_15440 IPR007167 Ferrous iron transporter FeoA domain BRM88_15440 IPR008988 Transcriptional repressor, C-terminal BRM88_15440 IPR038157 BRM88_15440 BRM88_15445 IPR001753 Crotonase superfamily BRM88_15445 IPR014748 Crontonase, C-terminal BRM88_15445 IPR029045 ClpP/crotonase-like domain BRM88_15450 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BRM88_15450 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BRM88_15455 IPR000891 Pyruvate carboxyltransferase BRM88_15455 IPR013785 Aldolase-type TIM barrel BRM88_15460 IPR002347 Glucose/ribitol dehydrogenase BRM88_15460 IPR020904 Short-chain dehydrogenase/reductase, conserved site BRM88_15460 IPR036291 BRM88_15460 BRM88_15465 IPR001059 Translation elongation factor P/YeiP, central BRM88_15465 IPR008991 Translation protein SH3-like domain BRM88_15465 IPR011897 Translation elongation factor P-like, YeiP BRM88_15465 IPR012340 Nucleic acid-binding, OB-fold BRM88_15465 IPR013185 Translation elongation factor, KOW-like BRM88_15465 IPR013852 Translation elongation factor P/YeiP, conserved site BRM88_15465 IPR014722 Ribosomal protein L2 domain 2 BRM88_15465 IPR015365 Elongation factor P, C-terminal BRM88_15465 IPR020599 Translation elongation factor P/YeiP BRM88_15485 IPR003663 Sugar/inositol transporter BRM88_15485 IPR005828 General substrate transporter BRM88_15485 IPR005829 Sugar transporter, conserved site BRM88_15485 IPR036259 BRM88_15485 BRM88_15490 IPR001998 Xylose isomerase BRM88_15490 IPR013452 Xylose isomerase, bacterial-type BRM88_15490 IPR036237 BRM88_15490 BRM88_15495 IPR000577 BRM88_15495 BRM88_15495 IPR006000 Xylulokinase BRM88_15495 IPR018483 Carbohydrate kinase, FGGY, conserved site BRM88_15495 IPR018484 Carbohydrate kinase, FGGY, N-terminal BRM88_15495 IPR018485 Carbohydrate kinase, FGGY, C-terminal BRM88_15505 IPR000322 Glycoside hydrolase, family 31 BRM88_15505 IPR011013 Galactose mutarotase-like domain BRM88_15505 IPR011658 PA14 BRM88_15505 IPR013780 Glycosyl hydrolase, family 13, all-beta BRM88_15505 IPR017853 Glycoside hydrolase, superfamily BRM88_15505 IPR032513 BRM88_15505 BRM88_15505 IPR033403 BRM88_15505 BRM88_15515 IPR000847 Transcription regulator HTH, LysR BRM88_15515 IPR005119 LysR, substrate-binding BRM88_15515 IPR036388 BRM88_15515 BRM88_15515 IPR036390 BRM88_15515 BRM88_15520 IPR000887 KDPG/KHG aldolase BRM88_15520 IPR013785 Aldolase-type TIM barrel BRM88_15520 IPR031338 BRM88_15520 BRM88_15525 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain BRM88_15525 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BRM88_15525 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site BRM88_15525 IPR023592 D-galactonate dehydratase BRM88_15525 IPR029017 Enolase N-terminal domain-like BRM88_15525 IPR029065 Enolase C-terminal domain-like BRM88_15525 IPR036849 BRM88_15525 BRM88_15530 IPR005511 Senescence marker protein-30 (SMP-30) BRM88_15530 IPR011042 Six-bladed beta-propeller, TolB-like BRM88_15530 IPR013658 SMP-30/Gluconolactonase/LRE-like region BRM88_15535 IPR007729 2-keto-3-deoxy-galactonokinase BRM88_15540 IPR000813 7Fe ferredoxin BRM88_15540 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BRM88_15540 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BRM88_15540 IPR022569 Ferredoxin, C-terminal BRM88_15550 IPR002220 DapA-like BRM88_15550 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA BRM88_15550 IPR013785 Aldolase-type TIM barrel BRM88_15550 IPR020624 Dihydrodipicolinate synthetase, conserved site BRM88_15550 IPR020625 Dihydrodipicolinate synthetase, active site BRM88_15555 IPR016867 Glycine cleavage repressor GcvR BRM88_15560 IPR009671 Regulator of ribonuclease activity B domain BRM88_15560 IPR036701 BRM88_15560 BRM88_15565 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant BRM88_15565 IPR036249 BRM88_15565 BRM88_15570 IPR002716 PIN domain BRM88_15570 IPR003714 PhoH-like protein BRM88_15570 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_15570 IPR029060 PIN domain-like BRM88_15580 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase BRM88_15580 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase BRM88_15580 IPR029056 Ribokinase-like BRM88_15585 IPR029058 Alpha/Beta hydrolase fold BRM88_15590 IPR029058 Alpha/Beta hydrolase fold BRM88_15605 IPR001763 Rhodanese-like domain BRM88_15605 IPR032816 BRM88_15605 BRM88_15605 IPR036873 BRM88_15605 BRM88_15610 IPR000847 Transcription regulator HTH, LysR BRM88_15610 IPR005119 LysR, substrate-binding BRM88_15610 IPR036388 BRM88_15610 BRM88_15610 IPR036390 BRM88_15610 BRM88_15615 IPR003829 Pirin, N-terminal domain BRM88_15615 IPR011051 RmlC-like cupin domain BRM88_15615 IPR012093 Pirin BRM88_15615 IPR014710 RmlC-like jelly roll fold BRM88_15625 IPR023346 Lysozyme-like domain BRM88_15630 IPR023346 Lysozyme-like domain BRM88_15635 IPR002648 Isopentenyl transferase BRM88_15635 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_15640 IPR007694 DNA helicase, DnaB-like, C-terminal BRM88_15640 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_15645 IPR007693 DNA helicase, DnaB-like, N-terminal BRM88_15645 IPR036185 BRM88_15645 BRM88_15655 IPR036388 BRM88_15655 BRM88_15665 IPR003751 Carbon storage regulator BRM88_15665 IPR036107 BRM88_15665 BRM88_15670 IPR002318 Alanine-tRNA ligase, class IIc BRM88_15670 IPR003156 DHHA1 domain BRM88_15670 IPR009000 Translation protein, beta-barrel domain BRM88_15670 IPR012947 Threonyl/alanyl tRNA synthetase, SAD BRM88_15670 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain BRM88_15670 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain BRM88_15670 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal BRM88_15670 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria BRM88_15675 IPR003783 Regulatory protein RecX BRM88_15675 IPR036388 BRM88_15675 BRM88_15685 IPR003593 AAA+ ATPase domain BRM88_15685 IPR013765 DNA recombination and repair protein RecA BRM88_15685 IPR020584 DNA recombination/repair protein RecA, conserved site BRM88_15685 IPR023400 DNA recombination and repair protein RecA, C-terminal BRM88_15685 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_15690 IPR006197 Peptidase S24, LexA-like BRM88_15690 IPR006199 LexA repressor, DNA-binding domain BRM88_15690 IPR006200 LexA repressor BRM88_15690 IPR015927 Peptidase S24/S26A/S26B/S26C BRM88_15690 IPR036286 BRM88_15690 BRM88_15690 IPR036388 BRM88_15690 BRM88_15690 IPR036390 BRM88_15690 BRM88_15695 IPR004147 UbiB domain BRM88_15695 IPR010232 Probable protein kinase UbiB BRM88_15695 IPR011009 Protein kinase-like domain BRM88_15700 IPR008136 CinA, C-terminal BRM88_15700 IPR036653 BRM88_15700 BRM88_15705 IPR005225 Small GTP-binding protein domain BRM88_15705 IPR006073 GTP binding domain BRM88_15705 IPR016496 GTPase HflX BRM88_15705 IPR025121 GTPase HflX N-terminal domain BRM88_15705 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_15705 IPR032305 BRM88_15705 BRM88_15710 IPR005001 Host factor Hfq BRM88_15710 IPR010920 Like-Sm (LSM) domain BRM88_15715 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase BRM88_15715 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_15720 IPR000489 Pterin-binding BRM88_15720 IPR006390 Dihydropteroate synthase BRM88_15720 IPR011005 Dihydropteroate synthase-like BRM88_15725 IPR000642 Peptidase M41 BRM88_15725 IPR003593 AAA+ ATPase domain BRM88_15725 IPR003959 ATPase, AAA-type, core BRM88_15725 IPR003960 ATPase, AAA-type, conserved site BRM88_15725 IPR005936 Peptidase, FtsH BRM88_15725 IPR011546 Peptidase M41, FtsH extracellular BRM88_15725 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_15725 IPR037219 BRM88_15725 BRM88_15730 IPR002877 Ribosomal RNA methyltransferase FtsJ domain BRM88_15730 IPR015507 Ribosomal RNA large subunit methyltransferase E BRM88_15730 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_15735 IPR001890 RNA-binding, CRM domain BRM88_15735 IPR017924 RNA-binding protein YhbY BRM88_15735 IPR035920 BRM88_15735 BRM88_15740 IPR007523 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 BRM88_15740 IPR036748 BRM88_15740 BRM88_15745 IPR011055 Duplicated hybrid motif BRM88_15745 IPR016047 Peptidase M23 BRM88_15745 IPR018392 LysM domain BRM88_15745 IPR036779 BRM88_15745 BRM88_15750 IPR032816 BRM88_15750 BRM88_15755 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase BRM88_15755 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_15760 IPR002828 Survival protein SurE-like phosphatase/nucleotidase BRM88_15760 IPR030048 BRM88_15760 BRM88_15760 IPR036523 BRM88_15760 BRM88_15765 IPR002625 Smr protein/MutS2 C-terminal BRM88_15765 IPR036063 BRM88_15765 BRM88_15775 IPR001656 Pseudouridine synthase, TruD BRM88_15775 IPR020103 Pseudouridine synthase, catalytic domain BRM88_15775 IPR020119 Pseudouridine synthase TruD, conserved site BRM88_15780 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase BRM88_15780 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site BRM88_15780 IPR036571 BRM88_15780 BRM88_15790 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BRM88_15790 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site BRM88_15790 IPR029044 Nucleotide-diphospho-sugar transferases BRM88_15790 IPR034683 BRM88_15790 BRM88_15795 IPR007060 Septum formation initiator FtsL/DivIC BRM88_15795 IPR023081 Cell division protein FtsB BRM88_15800 IPR000941 Enolase BRM88_15800 IPR020809 Enolase, conserved site BRM88_15800 IPR020810 Enolase, C-terminal BRM88_15800 IPR020811 Enolase, N-terminal BRM88_15800 IPR029017 Enolase N-terminal domain-like BRM88_15800 IPR036849 BRM88_15800 BRM88_15810 IPR006218 DAHP synthetase I/KDSA BRM88_15810 IPR006269 3-deoxy-8-phosphooctulonate synthase BRM88_15810 IPR013785 Aldolase-type TIM barrel BRM88_15815 IPR004468 CTP synthase BRM88_15815 IPR017456 CTP synthase, N-terminal BRM88_15815 IPR017926 Glutamine amidotransferase BRM88_15815 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_15815 IPR029062 Class I glutamine amidotransferase-like BRM88_15825 IPR001241 DNA topoisomerase, type IIA BRM88_15825 IPR002288 DNA gyrase B subunit, C-terminal BRM88_15825 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_15825 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative BRM88_15825 IPR006171 Toprim domain BRM88_15825 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 BRM88_15825 IPR013759 DNA topoisomerase, type IIA, central domain BRM88_15825 IPR013760 DNA topoisomerase, type IIA-like domain BRM88_15825 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BRM88_15825 IPR018522 DNA topoisomerase, type IIA, conserved site BRM88_15825 IPR020568 Ribosomal protein S5 domain 2-type fold BRM88_15825 IPR036890 BRM88_15825 BRM88_15835 IPR001563 Peptidase S10, serine carboxypeptidase BRM88_15835 IPR018202 Peptidase S10, serine carboxypeptidase, active site BRM88_15835 IPR029058 Alpha/Beta hydrolase fold BRM88_15840 IPR003848 Domain of unknown function DUF218 BRM88_15840 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_15845 IPR001204 Phosphate transporter BRM88_15850 IPR018445 Putitive phosphate transport regulator BRM88_15850 IPR038078 BRM88_15850 BRM88_15860 IPR000644 CBS domain BRM88_15860 IPR002550 Domain of unknown function DUF21 BRM88_15860 IPR005170 Transporter-associated domain BRM88_15860 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 BRM88_15860 IPR036318 BRM88_15860 BRM88_15870 IPR012349 FMN-binding split barrel BRM88_15870 IPR038725 BRM88_15870 BRM88_15875 IPR011251 Luciferase-like domain BRM88_15875 IPR019949 Luciferase family oxidoreductase, group 1 BRM88_15875 IPR036661 BRM88_15875 BRM88_15895 IPR005828 General substrate transporter BRM88_15895 IPR005829 Sugar transporter, conserved site BRM88_15895 IPR036259 BRM88_15895 BRM88_15905 IPR003439 ABC transporter-like BRM88_15905 IPR003593 AAA+ ATPase domain BRM88_15905 IPR017871 ABC transporter, conserved site BRM88_15905 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_15905 IPR036640 BRM88_15905 BRM88_15915 IPR006638 Elongator protein 3/MiaB/NifB BRM88_15915 IPR007197 Radical SAM BRM88_15915 IPR023404 Radical SAM, alpha/beta horseshoe BRM88_15920 IPR039498 BRM88_15920 BRM88_15925 IPR012337 Ribonuclease H-like domain BRM88_15925 IPR025246 Transposase IS30-like HTH domain BRM88_15930 IPR001296 Glycosyl transferase, family 1 BRM88_15930 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain BRM88_15935 IPR001296 Glycosyl transferase, family 1 BRM88_15935 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain BRM88_15940 IPR013216 Methyltransferase type 11 BRM88_15940 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_15945 IPR006680 Amidohydrolase 1 BRM88_15945 IPR011059 Metal-dependent hydrolase, composite domain BRM88_15945 IPR032466 BRM88_15945 BRM88_15950 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_15955 IPR003856 Lipopolysaccharide biosynthesis BRM88_15965 IPR001173 Glycosyltransferase 2-like BRM88_15965 IPR029044 Nucleotide-diphospho-sugar transferases BRM88_15970 IPR002797 Polysaccharide biosynthesis protein BRM88_15975 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BRM88_15975 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BRM88_15975 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BRM88_15975 IPR015424 Pyridoxal phosphate-dependent transferase BRM88_15980 IPR016181 Acyl-CoA N-acyltransferase BRM88_15980 IPR038740 BRM88_15980 BRM88_15985 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain BRM88_15990 IPR001451 Bacterial transferase hexapeptide repeat BRM88_15990 IPR011004 Trimeric LpxA-like BRM88_15990 IPR018357 Hexapeptide transferase, conserved site BRM88_15990 IPR020019 Sialic acid O-acyltransferase, NeuD BRM88_15995 IPR008894 WxcM-like, C-terminal BRM88_15995 IPR011051 RmlC-like cupin domain BRM88_15995 IPR014710 RmlC-like jelly roll fold BRM88_16000 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase BRM88_16000 IPR016174 Di-haem cytochrome, transmembrane BRM88_16010 IPR002327 Cytochrome c, class IA/ IB BRM88_16010 IPR009056 Cytochrome c-like domain BRM88_16010 IPR036909 BRM88_16010 BRM88_16020 IPR007627 RNA polymerase sigma-70 region 2 BRM88_16020 IPR007630 RNA polymerase sigma-70 region 4 BRM88_16020 IPR013324 RNA polymerase sigma factor, region 3/4 BRM88_16020 IPR013325 RNA polymerase sigma factor, region 2 BRM88_16020 IPR014284 RNA polymerase sigma-70 like domain BRM88_16020 IPR036388 BRM88_16020 BRM88_16025 IPR027383 Putative zinc-finger BRM88_16030 IPR000209 Peptidase S8/S53 domain BRM88_16030 IPR015500 Peptidase S8, subtilisin-related BRM88_16030 IPR022398 Peptidase S8, subtilisin, His-active site BRM88_16030 IPR023827 Peptidase S8, subtilisin, Asp-active site BRM88_16030 IPR036852 BRM88_16030 BRM88_16035 IPR002541 Cytochrome c assembly protein BRM88_16035 IPR003557 Cytochrome c-type biogenesis protein CcmC BRM88_16040 IPR007078 Haem exporter protein D (CcmD) BRM88_16045 IPR004329 CcmE/CycJ protein BRM88_16045 IPR036127 BRM88_16045 BRM88_16050 IPR002541 Cytochrome c assembly protein BRM88_16050 IPR003567 Cytochrome c-type biogenesis protein BRM88_16050 IPR003568 Cytochrome c-type biogenesis protein CcmF BRM88_16050 IPR032523 BRM88_16050 BRM88_16055 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE BRM88_16055 IPR013740 Redoxin BRM88_16055 IPR036249 BRM88_16055 BRM88_16060 IPR005616 Cytochrome C biogenesis protein CcmH BRM88_16060 IPR038297 BRM88_16060 BRM88_16065 IPR011990 Tetratricopeptide-like helical domain BRM88_16070 IPR005042 Avirulence protein PthA-related, Xanthomonas species BRM88_16090 IPR005042 Avirulence protein PthA-related, Xanthomonas species BRM88_16090 IPR016039 Thiolase-like BRM88_16105 IPR005042 Avirulence protein PthA-related, Xanthomonas species BRM88_16120 IPR008490 Transposase InsH, N-terminal BRM88_16125 IPR001036 Acriflavin resistance protein BRM88_16125 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 BRM88_16125 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BRM88_16130 IPR006143 RND efflux pump, membrane fusion protein BRM88_16130 IPR032317 BRM88_16130 BRM88_16135 IPR009057 Homeodomain-like BRM88_16180 IPR001789 Signal transduction response regulator, receiver domain BRM88_16180 IPR001867 Signal transduction response regulator, C-terminal BRM88_16180 IPR011006 CheY-like superfamily BRM88_16180 IPR016032 Signal transduction response regulator, C-terminal effector BRM88_16180 IPR036388 BRM88_16180 BRM88_16185 IPR004852 Di-haem cytochrome c peroxidase BRM88_16185 IPR009056 Cytochrome c-like domain BRM88_16185 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase BRM88_16185 IPR036909 BRM88_16185 BRM88_16190 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_16190 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_16190 IPR011006 CheY-like superfamily BRM88_16190 IPR036097 BRM88_16190 BRM88_16190 IPR036890 BRM88_16190 BRM88_16195 IPR000847 Transcription regulator HTH, LysR BRM88_16195 IPR005119 LysR, substrate-binding BRM88_16195 IPR036388 BRM88_16195 BRM88_16195 IPR036390 BRM88_16195 BRM88_16200 IPR010657 ImpA, N-terminal BRM88_16200 IPR017740 Type VI secretion system-associated, ImpA BRM88_16220 IPR000719 Protein kinase domain BRM88_16220 IPR005532 Formylglycine-generating sulphatase enzyme domain BRM88_16220 IPR008271 Serine/threonine-protein kinase, active site BRM88_16220 IPR011009 Protein kinase-like domain BRM88_16220 IPR016187 C-type lectin fold BRM88_16220 IPR017441 Protein kinase, ATP binding site BRM88_16225 IPR001932 Protein phosphatase 2C (PP2C)-like domain BRM88_16225 IPR036457 BRM88_16225 BRM88_16230 IPR017748 Type VI secretion system-associated, BMAA0400 BRM88_16230 IPR038225 BRM88_16230 BRM88_16235 IPR009612 ImcF-related BRM88_16235 IPR010623 Domain of unknown function DUF1215 BRM88_16235 IPR017731 Type VI secretion system, IcmF BRM88_16235 IPR025743 ImcF-related, N-terminal domain BRM88_16235 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_16240 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal BRM88_16240 IPR017732 Type IV / VI secretion system, DotU BRM88_16240 IPR017733 Type VI secretion system, OmpA/MotB domain BRM88_16240 IPR036737 BRM88_16240 BRM88_16240 IPR038522 BRM88_16240 BRM88_16245 IPR010263 Protein of unknown function DUF876 BRM88_16250 IPR000253 Forkhead-associated (FHA) domain BRM88_16250 IPR008984 SMAD/FHA domain BRM88_16250 IPR017735 Type VI secretion system, FHA domain-containing protein BRM88_16260 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein BRM88_16260 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset BRM88_16260 IPR037026 BRM88_16260 BRM88_16265 IPR002125 CMP/dCMP deaminase, zinc-binding BRM88_16265 IPR016192 APOBEC/CMP deaminase, zinc-binding BRM88_16265 IPR016193 Cytidine deaminase-like BRM88_16275 IPR016192 APOBEC/CMP deaminase, zinc-binding BRM88_16275 IPR027796 OTT_1508-like deaminase BRM88_16280 IPR001270 ClpA/B family BRM88_16280 IPR003593 AAA+ ATPase domain BRM88_16280 IPR003959 ATPase, AAA-type, core BRM88_16280 IPR017729 Type VI secretion system, ATPase ClpV1 BRM88_16280 IPR018368 ClpA/B, conserved site 1 BRM88_16280 IPR019489 Clp ATPase, C-terminal BRM88_16280 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_16280 IPR028299 ClpA/B, conserved site 2 BRM88_16280 IPR036628 BRM88_16280 BRM88_16285 IPR010732 Protein of unknown function DUF1305 BRM88_16290 IPR010272 Type VI secretion system, VCA0110 BRM88_16295 IPR007048 GpW/Gp25/anti-adapter protein IraD BRM88_16295 IPR017737 Type VI secretion system, lysozyme-related protein BRM88_16300 IPR009211 Predicted virulence protein, SciE type BRM88_16300 IPR011990 Tetratricopeptide-like helical domain BRM88_16305 IPR008514 Type VI secretion system effector, Hcp BRM88_16305 IPR036624 BRM88_16305 BRM88_16310 IPR010269 Protein of unknown function DUF877 BRM88_16315 IPR008312 Uncharacterised conserved protein UCP028301 BRM88_16335 IPR002559 Transposase, IS4-like BRM88_16335 IPR008490 Transposase InsH, N-terminal BRM88_16340 IPR012337 Ribonuclease H-like domain BRM88_16340 IPR038721 BRM88_16340 BRM88_16350 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 BRM88_16350 IPR032877 BRM88_16350 BRM88_16355 IPR002559 Transposase, IS4-like BRM88_16355 IPR008490 Transposase InsH, N-terminal BRM88_16400 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal BRM88_16400 IPR017726 Fe/S biogenesis protein NfuA BRM88_16400 IPR034904 BRM88_16400 BRM88_16400 IPR035903 BRM88_16400 BRM88_16405 IPR001533 Transcriptional coactivator/pterin dehydratase BRM88_16405 IPR036428 BRM88_16405 BRM88_16410 IPR006260 TonB, C-terminal BRM88_16410 IPR037682 BRM88_16410 BRM88_16415 IPR003689 Zinc/iron permease BRM88_16425 IPR021728 Protein of unknown function DUF3300 BRM88_16430 IPR002942 RNA-binding S4 domain BRM88_16430 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F BRM88_16430 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site BRM88_16430 IPR006225 Pseudouridine synthase, RluC/RluD BRM88_16430 IPR020103 Pseudouridine synthase, catalytic domain BRM88_16430 IPR036986 BRM88_16430 BRM88_16435 IPR003029 Ribosomal protein S1, RNA-binding domain BRM88_16435 IPR004659 Ribonuclease E/G BRM88_16435 IPR012340 Nucleic acid-binding, OB-fold BRM88_16435 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G BRM88_16435 IPR022967 RNA-binding domain, S1 BRM88_16435 IPR028878 Ribonuclease E BRM88_16450 IPR000792 Transcription regulator LuxR, C-terminal BRM88_16450 IPR001789 Signal transduction response regulator, receiver domain BRM88_16450 IPR011006 CheY-like superfamily BRM88_16450 IPR016032 Signal transduction response regulator, C-terminal effector BRM88_16455 IPR001763 Rhodanese-like domain BRM88_16455 IPR020936 Uncharacterised protein family UPF0176 BRM88_16455 IPR036873 BRM88_16455 BRM88_16460 IPR002559 Transposase, IS4-like BRM88_16460 IPR008490 Transposase InsH, N-terminal BRM88_16470 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain BRM88_16475 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like BRM88_16475 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 BRM88_16475 IPR023166 HI0933 insert-like domain BRM88_16475 IPR036188 BRM88_16475 BRM88_16480 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal BRM88_16480 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like BRM88_16480 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation BRM88_16480 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal BRM88_16480 IPR017476 UDP-glucose/GDP-mannose dehydrogenase BRM88_16480 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase BRM88_16480 IPR036220 BRM88_16480 BRM88_16480 IPR036291 BRM88_16480 BRM88_16490 IPR003542 Enterobactin synthetase-like, component D BRM88_16490 IPR008278 4'-phosphopantetheinyl transferase superfamily BRM88_16490 IPR037143 BRM88_16490 BRM88_16500 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 BRM88_16500 IPR032877 BRM88_16500 BRM88_16515 IPR019626 Stress-induced protein, KGG, repeat BRM88_16520 IPR002559 Transposase, IS4-like BRM88_16520 IPR008490 Transposase InsH, N-terminal BRM88_16525 IPR002559 Transposase, IS4-like BRM88_16525 IPR008490 Transposase InsH, N-terminal BRM88_16530 IPR024442 Transposase, zinc-ribbon BRM88_16530 IPR024445 Transposase, ISXO2-like BRM88_16540 IPR024442 Transposase, zinc-ribbon BRM88_16540 IPR024445 Transposase, ISXO2-like BRM88_16555 IPR000878 Tetrapyrrole methylase BRM88_16555 IPR006367 Sirohaem synthase, N-terminal BRM88_16555 IPR014777 Tetrapyrrole methylase, subdomain 1 BRM88_16555 IPR019478 Sirohaem synthase, dimerisation domain BRM88_16555 IPR028281 Siroheme synthase, central domain BRM88_16555 IPR035996 BRM88_16555 BRM88_16555 IPR036291 BRM88_16555 BRM88_16580 IPR025877 MobA-like NTP transferase domain BRM88_16580 IPR029044 Nucleotide-diphospho-sugar transferases BRM88_16585 IPR001453 Molybdopterin binding domain BRM88_16585 IPR005110 MoeA, N-terminal and linker domain BRM88_16585 IPR005111 MoeA, C-terminal, domain IV BRM88_16585 IPR008284 Molybdenum cofactor biosynthesis, conserved site BRM88_16585 IPR036135 BRM88_16585 BRM88_16585 IPR036425 BRM88_16585 BRM88_16585 IPR036688 BRM88_16585 BRM88_16615 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 BRM88_16615 IPR032877 BRM88_16615 BRM88_16630 IPR009057 Homeodomain-like BRM88_16630 IPR025959 Winged helix-turn helix domain BRM88_16630 IPR038717 BRM88_16630 BRM88_16640 IPR008928 Six-hairpin glycosidase-like BRM88_16640 IPR012878 Protein of unknown function DUF1680 BRM88_16655 IPR001207 Transposase, mutator type BRM88_16660 IPR012910 TonB-dependent receptor, plug BRM88_16660 IPR037066 BRM88_16660 BRM88_16665 IPR012910 TonB-dependent receptor, plug BRM88_16665 IPR037066 BRM88_16665 BRM88_16680 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BRM88_16680 IPR002469 Peptidase S9B, dipeptidylpeptidase IV N-terminal BRM88_16680 IPR029058 Alpha/Beta hydrolase fold BRM88_16680 IPR038554 BRM88_16680 BRM88_16685 IPR006710 Glycoside hydrolase, family 43 BRM88_16685 IPR008979 Galactose-binding domain-like BRM88_16685 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain BRM88_16690 IPR000421 Coagulation factor 5/8 C-terminal type domain BRM88_16690 IPR008928 Six-hairpin glycosidase-like BRM88_16690 IPR008979 Galactose-binding domain-like BRM88_16690 IPR011081 Bacterial Ig-related BRM88_16690 IPR012341 Six-hairpin glycosidase BRM88_16690 IPR013783 Immunoglobulin-like fold BRM88_16695 IPR000531 TonB-dependent receptor, beta-barrel BRM88_16695 IPR012910 TonB-dependent receptor, plug BRM88_16695 IPR037066 BRM88_16695 BRM88_16700 IPR008928 Six-hairpin glycosidase-like BRM88_16700 IPR012341 Six-hairpin glycosidase BRM88_16705 IPR000209 Peptidase S8/S53 domain BRM88_16705 IPR015366 Peptidase S53, propeptide BRM88_16705 IPR023828 Peptidase S8, subtilisin, Ser-active site BRM88_16705 IPR036852 BRM88_16705 BRM88_16720 IPR017853 Glycoside hydrolase, superfamily BRM88_16725 IPR017853 Glycoside hydrolase, superfamily BRM88_16740 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BRM88_16740 IPR002469 Peptidase S9B, dipeptidylpeptidase IV N-terminal BRM88_16740 IPR029058 Alpha/Beta hydrolase fold BRM88_16740 IPR038554 BRM88_16740 BRM88_16745 IPR002293 Amino acid/polyamine transporter I BRM88_16750 IPR010281 Protein of unknown function DUF885 BRM88_16755 IPR010281 Protein of unknown function DUF885 BRM88_16760 IPR000587 Creatinase, N-terminal BRM88_16760 IPR000994 Peptidase M24, structural domain BRM88_16760 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BRM88_16760 IPR036005 BRM88_16760 BRM88_16765 IPR015590 Aldehyde dehydrogenase domain BRM88_16765 IPR016161 Aldehyde/histidinol dehydrogenase BRM88_16765 IPR016162 Aldehyde dehydrogenase, N-terminal BRM88_16765 IPR016163 Aldehyde dehydrogenase, C-terminal BRM88_16770 IPR002220 DapA-like BRM88_16770 IPR013785 Aldolase-type TIM barrel BRM88_16775 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II BRM88_16775 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B BRM88_16775 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain BRM88_16775 IPR036188 BRM88_16775 BRM88_16780 IPR036010 BRM88_16780 BRM88_16785 IPR006076 FAD dependent oxidoreductase BRM88_16785 IPR036188 BRM88_16785 BRM88_16790 IPR008794 Proline racemase family BRM88_16795 IPR009057 Homeodomain-like BRM88_16795 IPR013656 PAS fold-4 BRM88_16795 IPR018060 DNA binding HTH domain, AraC-type BRM88_16795 IPR018062 HTH domain AraC-type, conserved site BRM88_16795 IPR020449 Transcription regulator HTH, AraC- type BRM88_16795 IPR035965 BRM88_16795 BRM88_16800 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain BRM88_16800 IPR003593 AAA+ ATPase domain BRM88_16800 IPR004390 Signal-recognition particle receptor FtsY BRM88_16800 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle BRM88_16800 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_16815 IPR000445 Helix-hairpin-helix motif BRM88_16815 IPR003265 HhH-GPD domain BRM88_16815 IPR004035 Endonuclease III, iron-sulphur binding site BRM88_16815 IPR004036 Endonuclease III-like, conserved site-2 BRM88_16815 IPR005760 A/G-specific adenine glycosylase MutY BRM88_16815 IPR011257 DNA glycosylase BRM88_16815 IPR015797 NUDIX hydrolase domain-like BRM88_16815 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal BRM88_16815 IPR029119 MutY, C-terminal BRM88_16820 IPR007457 Fe(II) trafficking protein YggX BRM88_16820 IPR036766 BRM88_16820 BRM88_16825 IPR000014 PAS domain BRM88_16825 IPR001610 PAC motif BRM88_16825 IPR001789 Signal transduction response regulator, receiver domain BRM88_16825 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_16825 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_16825 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_16825 IPR011006 CheY-like superfamily BRM88_16825 IPR035965 BRM88_16825 BRM88_16825 IPR036097 BRM88_16825 BRM88_16825 IPR036890 BRM88_16825 BRM88_16870 IPR014942 Protein of unknown function DUF1814 BRM88_16875 IPR025159 Domain of unknown function DUF4095 BRM88_16885 IPR006793 FaeA-like protein BRM88_16885 IPR036388 BRM88_16885 BRM88_16895 IPR009057 Homeodomain-like BRM88_16895 IPR025959 Winged helix-turn helix domain BRM88_16895 IPR038717 BRM88_16895 BRM88_16915 IPR000566 Lipocalin/cytosolic fatty-acid binding domain BRM88_16915 IPR002446 Lipocalin, bacterial BRM88_16915 IPR012674 Calycin BRM88_16915 IPR022271 Lipocalin, ApoD type BRM88_16915 IPR022272 Lipocalin family conserved site BRM88_16930 IPR009057 Homeodomain-like BRM88_16930 IPR012337 Ribonuclease H-like domain BRM88_16930 IPR038717 BRM88_16930 BRM88_16935 IPR002816 Pheromone shutdown, TraB BRM88_16940 IPR009327 Protein of unknown function DUF985 BRM88_16940 IPR011051 RmlC-like cupin domain BRM88_16940 IPR014710 RmlC-like jelly roll fold BRM88_16945 IPR004629 Glycosyl transferase WecB/TagA/CpsF BRM88_16950 IPR007345 Polysaccharide pyruvyl transferase BRM88_16970 IPR001296 Glycosyl transferase, family 1 BRM88_16970 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain BRM88_16975 IPR002656 Acyltransferase 3 BRM88_16980 IPR002656 Acyltransferase 3 BRM88_16990 IPR003362 Bacterial sugar transferase BRM88_16990 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ BRM88_16990 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase BRM88_16995 IPR003856 Lipopolysaccharide biosynthesis BRM88_16995 IPR032807 BRM88_16995 BRM88_17000 IPR003715 Polysaccharide export protein BRM88_17000 IPR019554 Soluble ligand binding domain BRM88_17010 IPR000551 MerR-type HTH domain BRM88_17010 IPR009061 DNA binding domain, putative BRM88_17015 IPR000119 Histone-like bacterial DNA-binding protein BRM88_17015 IPR005684 Integration host factor, alpha subunit BRM88_17015 IPR010992 Integration host factor (IHF)-like DNA-binding domain BRM88_17015 IPR020816 Histone-like DNA-binding protein, conserved site BRM88_17020 IPR002547 tRNA-binding domain BRM88_17020 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit BRM88_17020 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding BRM88_17020 IPR005146 B3/B4 tRNA-binding domain BRM88_17020 IPR005147 tRNA synthetase, B5-domain BRM88_17020 IPR009061 DNA binding domain, putative BRM88_17020 IPR012340 Nucleic acid-binding, OB-fold BRM88_17020 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 BRM88_17020 IPR036690 BRM88_17020 BRM88_17025 IPR002319 Phenylalanyl-tRNA synthetase BRM88_17025 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal BRM88_17025 IPR010978 tRNA-binding arm BRM88_17025 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial BRM88_17030 IPR005813 Ribosomal protein L20 BRM88_17030 IPR035566 BRM88_17030 BRM88_17035 IPR001706 Ribosomal protein L35, non-mitochondrial BRM88_17035 IPR018265 Ribosomal protein L35, conserved site BRM88_17035 IPR021137 Ribosomal protein L35 BRM88_17035 IPR037229 BRM88_17035 BRM88_17040 IPR001288 Translation initiation factor 3 BRM88_17040 IPR019813 Translation initiation factor 3, conserved site BRM88_17040 IPR019814 Translation initiation factor 3, N-terminal BRM88_17040 IPR019815 Translation initiation factor 3, C-terminal BRM88_17040 IPR036787 BRM88_17040 BRM88_17040 IPR036788 BRM88_17040 BRM88_17045 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain BRM88_17045 IPR002320 Threonine-tRNA ligase, class IIa BRM88_17045 IPR004095 TGS BRM88_17045 IPR004154 Anticodon-binding BRM88_17045 IPR012675 Beta-grasp domain BRM88_17045 IPR012676 TGS-like BRM88_17045 IPR012947 Threonyl/alanyl tRNA synthetase, SAD BRM88_17045 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain BRM88_17045 IPR036621 BRM88_17045 BRM88_17075 IPR001650 Helicase, C-terminal BRM88_17075 IPR001943 UVR domain BRM88_17075 IPR004807 UvrABC system, subunit B BRM88_17075 IPR006935 Helicase/UvrB domain BRM88_17075 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BRM88_17075 IPR024759 UvrB, YAD/RRR-motif-containing domain BRM88_17075 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_17075 IPR036876 BRM88_17075 BRM88_17080 IPR022346 General secretion pathway, GspH BRM88_17090 IPR000983 Bacterial general secretion pathway protein G-type pilin BRM88_17090 IPR012902 Prokaryotic N-terminal methylation site BRM88_17090 IPR031982 BRM88_17090 BRM88_17095 IPR008707 PilC beta-propeller domain BRM88_17100 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain BRM88_17105 IPR012902 Prokaryotic N-terminal methylation site BRM88_17105 IPR032092 BRM88_17105 BRM88_17110 IPR012902 Prokaryotic N-terminal methylation site BRM88_17110 IPR013362 Pilus modification type IV, PilV BRM88_17115 IPR012902 Prokaryotic N-terminal methylation site BRM88_17115 IPR022346 General secretion pathway, GspH BRM88_17120 IPR021826 Protein of unknown function DUF3412 BRM88_17120 IPR027820 Domain of unknown function DUF4478 BRM88_17120 IPR031100 BRM88_17120 BRM88_17120 IPR037153 BRM88_17120 BRM88_17125 IPR008969 Carboxypeptidase-like, regulatory domain BRM88_17125 IPR012910 TonB-dependent receptor, plug BRM88_17125 IPR036942 BRM88_17125 BRM88_17135 IPR002771 Multiple antibiotic resistance (MarC)-related BRM88_17140 IPR002347 Glucose/ribitol dehydrogenase BRM88_17140 IPR036291 BRM88_17140 BRM88_17145 IPR002109 Glutaredoxin BRM88_17145 IPR004480 Monothiol glutaredoxin-related BRM88_17145 IPR014434 Monothiol glutaredoxin BRM88_17145 IPR036249 BRM88_17145 BRM88_17150 IPR001189 Manganese/iron superoxide dismutase BRM88_17150 IPR019831 Manganese/iron superoxide dismutase, N-terminal BRM88_17150 IPR019832 Manganese/iron superoxide dismutase, C-terminal BRM88_17150 IPR019833 Manganese/iron superoxide dismutase, binding site BRM88_17150 IPR036314 BRM88_17150 BRM88_17150 IPR036324 BRM88_17150 BRM88_17155 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type BRM88_17155 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit BRM88_17155 IPR011054 Rudiment single hybrid motif BRM88_17155 IPR013815 ATP-grasp fold, subdomain 1 BRM88_17155 IPR016185 Pre-ATP-grasp domain BRM88_17160 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain BRM88_17160 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE BRM88_17160 IPR033747 BRM88_17160 BRM88_17160 IPR035893 BRM88_17160 BRM88_17165 IPR005651 Uncharacterised protein family UPF0434/Trm112 BRM88_17170 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal BRM88_17170 IPR004393 Nicotinate-nucleotide pyrophosphorylase BRM88_17170 IPR013785 Aldolase-type TIM barrel BRM88_17170 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal BRM88_17170 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD BRM88_17170 IPR036068 BRM88_17170 BRM88_17170 IPR037128 BRM88_17170 BRM88_17175 IPR014545 Uncharacterised conserved protein UCP028415 BRM88_17175 IPR019262 Domain of unknown function DUF2272 BRM88_17180 IPR001247 Exoribonuclease, phosphorolytic domain 1 BRM88_17180 IPR003029 Ribosomal protein S1, RNA-binding domain BRM88_17180 IPR004087 K Homology domain BRM88_17180 IPR004088 K Homology domain, type 1 BRM88_17180 IPR012162 Polyribonucleotide nucleotidyltransferase BRM88_17180 IPR012340 Nucleic acid-binding, OB-fold BRM88_17180 IPR015847 Exoribonuclease, phosphorolytic domain 2 BRM88_17180 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain BRM88_17180 IPR020568 Ribosomal protein S5 domain 2-type fold BRM88_17180 IPR022967 RNA-binding domain, S1 BRM88_17180 IPR027408 PNPase/RNase PH domain BRM88_17180 IPR036345 BRM88_17180 BRM88_17180 IPR036456 BRM88_17180 BRM88_17180 IPR036612 BRM88_17180 BRM88_17185 IPR000589 Ribosomal protein S15 BRM88_17185 IPR005290 Ribosomal protein S15, bacterial-type BRM88_17185 IPR009068 S15/NS1, RNA-binding BRM88_17190 IPR002501 Pseudouridine synthase II BRM88_17190 IPR014780 tRNA pseudouridine synthase II, TruB BRM88_17190 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal BRM88_17190 IPR015947 PUA-like domain BRM88_17190 IPR020103 Pseudouridine synthase, catalytic domain BRM88_17190 IPR032819 BRM88_17190 BRM88_17195 IPR000238 Ribosome-binding factor A BRM88_17195 IPR015946 K homology domain-like, alpha/beta BRM88_17195 IPR020053 Ribosome-binding factor A, conserved site BRM88_17195 IPR023799 Ribosome-binding factor A domain BRM88_17200 IPR000178 Translation initiation factor aIF-2, bacterial-like BRM88_17200 IPR000795 Elongation factor, GTP-binding domain BRM88_17200 IPR005225 Small GTP-binding protein domain BRM88_17200 IPR006847 Translation initiation factor IF-2, N-terminal BRM88_17200 IPR009000 Translation protein, beta-barrel domain BRM88_17200 IPR009061 DNA binding domain, putative BRM88_17200 IPR013575 Initiation factor 2 associated domain, bacterial BRM88_17200 IPR023115 Translation initiation factor IF- 2, domain 3 BRM88_17200 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_17200 IPR036925 BRM88_17200 BRM88_17205 IPR003029 Ribosomal protein S1, RNA-binding domain BRM88_17205 IPR004087 K Homology domain BRM88_17205 IPR009019 K homology domain, prokaryotic type BRM88_17205 IPR010213 Transcription termination factor NusA BRM88_17205 IPR010214 Transcription termination factor NusA, C-terminal duplication BRM88_17205 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical BRM88_17205 IPR012340 Nucleic acid-binding, OB-fold BRM88_17205 IPR013735 Transcription factor NusA, N-terminal BRM88_17205 IPR015946 K homology domain-like, alpha/beta BRM88_17205 IPR022967 RNA-binding domain, S1 BRM88_17205 IPR025249 KH domain, NusA-like BRM88_17205 IPR030842 BRM88_17205 BRM88_17205 IPR036555 BRM88_17205 BRM88_17210 IPR003728 Ribosome maturation factor RimP BRM88_17210 IPR028989 Ribosome maturation factor RimP, N-terminal BRM88_17210 IPR028998 Ribosome maturation factor RimP, C-terminal BRM88_17210 IPR035956 BRM88_17210 BRM88_17210 IPR036847 BRM88_17210 BRM88_17220 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase BRM88_17220 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 BRM88_17225 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase BRM88_17225 IPR003918 NADH:ubiquinone oxidoreductase BRM88_17225 IPR010227 NADH-quinone oxidoreductase, chain M/4 BRM88_17230 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal BRM88_17230 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase BRM88_17230 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 BRM88_17230 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup BRM88_17235 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K BRM88_17235 IPR039428 BRM88_17235 BRM88_17240 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 BRM88_17245 IPR010226 NADH-quinone oxidoreductase, chain I BRM88_17245 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BRM88_17245 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BRM88_17250 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H BRM88_17250 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site BRM88_17255 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site BRM88_17255 IPR006656 Molybdopterin oxidoreductase BRM88_17255 IPR006657 Molydopterin dinucleotide-binding domain BRM88_17255 IPR009010 Aspartate decarboxylase-like domain BRM88_17255 IPR010228 NADH:ubiquinone oxidoreductase, subunit G BRM88_17255 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding BRM88_17255 IPR036010 BRM88_17255 BRM88_17260 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site BRM88_17260 IPR011537 NADH ubiquinone oxidoreductase, F subunit BRM88_17260 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit BRM88_17260 IPR019554 Soluble ligand binding domain BRM88_17260 IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding BRM88_17260 IPR037207 BRM88_17260 BRM88_17260 IPR037225 BRM88_17260 BRM88_17265 IPR002023 NADH-quinone oxidoreductase subunit E-like BRM88_17265 IPR036249 BRM88_17265 BRM88_17270 IPR001135 NADH-quinone oxidoreductase, subunit D BRM88_17270 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site BRM88_17270 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H BRM88_17270 IPR029014 NiFe hydrogenase-like BRM88_17270 IPR038290 BRM88_17270 BRM88_17275 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit BRM88_17275 IPR010218 NADH dehydrogenase, subunit C BRM88_17275 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site BRM88_17275 IPR037232 BRM88_17275 BRM88_17280 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit BRM88_17280 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit BRM88_17285 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 BRM88_17285 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid BRM88_17285 IPR038430 BRM88_17285 BRM88_17295 IPR004692 Preprotein translocase SecG subunit BRM88_17300 IPR000652 Triosephosphate isomerase BRM88_17300 IPR013785 Aldolase-type TIM barrel BRM88_17300 IPR020861 Triosephosphate isomerase, active site BRM88_17300 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic BRM88_17300 IPR035990 BRM88_17300 BRM88_17305 IPR002347 Glucose/ribitol dehydrogenase BRM88_17305 IPR036291 BRM88_17305 BRM88_17315 IPR001486 Globin, truncated bacterial-like BRM88_17315 IPR009050 Globin-like BRM88_17315 IPR012292 Globin, structural domain BRM88_17315 IPR016339 Globin, truncated bacterial-like, HbN/cyanoglobin BRM88_17335 IPR000160 GGDEF domain BRM88_17335 IPR001633 EAL domain BRM88_17335 IPR003660 HAMP linker domain BRM88_17335 IPR029150 Sensory domain of two-component sensor kinase BRM88_17335 IPR029787 Nucleotide cyclase BRM88_17335 IPR035919 BRM88_17335 BRM88_17340 IPR008969 Carboxypeptidase-like, regulatory domain BRM88_17340 IPR008972 Cupredoxin BRM88_17345 IPR005123 Oxoglutarate/iron-dependent dioxygenase BRM88_17345 IPR026992 Non-haem dioxygenase N-terminal domain BRM88_17345 IPR027443 Isopenicillin N synthase-like BRM88_17350 IPR005841 Alpha-D-phosphohexomutase superfamily BRM88_17350 IPR005843 Alpha-D-phosphohexomutase, C-terminal BRM88_17350 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I BRM88_17350 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II BRM88_17350 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III BRM88_17350 IPR006352 Phosphoglucosamine mutase BRM88_17350 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III BRM88_17350 IPR016066 Alpha-D-phosphohexomutase, conserved site BRM88_17350 IPR036900 BRM88_17350 BRM88_17355 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit BRM88_17355 IPR029045 ClpP/crotonase-like domain BRM88_17355 IPR034733 BRM88_17355 BRM88_17360 IPR002028 Tryptophan synthase, alpha chain BRM88_17360 IPR011060 Ribulose-phosphate binding barrel BRM88_17360 IPR013785 Aldolase-type TIM barrel BRM88_17360 IPR018204 Tryptophan synthase, alpha chain, active site BRM88_17370 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BRM88_17370 IPR006653 Tryptophan synthase, beta chain, conserved site BRM88_17370 IPR006654 Tryptophan synthase, beta chain BRM88_17370 IPR023026 Tryptophan synthase beta chain/beta chain-like BRM88_17370 IPR036052 BRM88_17370 BRM88_17375 IPR000847 Transcription regulator HTH, LysR BRM88_17375 IPR005119 LysR, substrate-binding BRM88_17375 IPR036388 BRM88_17375 BRM88_17375 IPR036390 BRM88_17375 BRM88_17380 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain BRM88_17380 IPR011060 Ribulose-phosphate binding barrel BRM88_17380 IPR013785 Aldolase-type TIM barrel BRM88_17385 IPR001406 Pseudouridine synthase I, TruA BRM88_17385 IPR020095 Pseudouridine synthase I, TruA, C-terminal BRM88_17385 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain BRM88_17385 IPR020103 Pseudouridine synthase, catalytic domain BRM88_17395 IPR020011 Motility protein FimV, C-terminal BRM88_17395 IPR020012 Motility protein FimV, N-terminal BRM88_17395 IPR038440 BRM88_17395 BRM88_17405 IPR000534 Semialdehyde dehydrogenase, NAD-binding BRM88_17405 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type BRM88_17405 IPR012080 Aspartate-semialdehyde dehydrogenase BRM88_17405 IPR012280 Semialdehyde dehydrogenase, dimerisation domain BRM88_17405 IPR036291 BRM88_17405 BRM88_17410 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BRM88_17410 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain BRM88_17410 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BRM88_17410 IPR036291 BRM88_17410 BRM88_17415 IPR000453 Chorismate synthase BRM88_17415 IPR020541 Chorismate synthase, conserved site BRM88_17415 IPR035904 BRM88_17415 BRM88_17420 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BRM88_17420 IPR004556 Modification methylase HemK BRM88_17420 IPR007848 Methyltransferase small domain BRM88_17420 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase BRM88_17420 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_17425 IPR003782 Copper chaperone SCO1/SenC BRM88_17425 IPR036249 BRM88_17425 BRM88_17430 IPR003817 Phosphatidylserine decarboxylase-related BRM88_17430 IPR033177 BRM88_17430 BRM88_17430 IPR033178 BRM88_17430 BRM88_17440 IPR008258 Lytic transglycosylase-like SLT domain BRM88_17440 IPR018392 LysM domain BRM88_17440 IPR023346 Lysozyme-like domain BRM88_17440 IPR036779 BRM88_17440 BRM88_17465 IPR022764 Peptidase S54, rhomboid domain BRM88_17465 IPR035952 BRM88_17465 BRM88_17475 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal BRM88_17475 IPR006358 Transcription elongation factor GreB BRM88_17475 IPR018151 Transcription elongation factor, GreA/GreB, conserved site BRM88_17475 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal BRM88_17475 IPR023459 Transcription elongation factor GreA/GreB family BRM88_17475 IPR028624 Transcription elongation factor GreA/GreB BRM88_17475 IPR036805 BRM88_17475 BRM88_17475 IPR036953 BRM88_17475 BRM88_17480 IPR005839 Methylthiotransferase BRM88_17480 IPR005840 Ribosomal protein S12 methylthiotransferase RimO BRM88_17480 IPR006638 Elongator protein 3/MiaB/NifB BRM88_17480 IPR007197 Radical SAM BRM88_17480 IPR013848 Methylthiotransferase, N-terminal BRM88_17480 IPR020612 Methylthiotransferase, conserved site BRM88_17480 IPR023404 Radical SAM, alpha/beta horseshoe BRM88_17480 IPR038135 BRM88_17480 BRM88_17485 IPR002925 Dienelactone hydrolase BRM88_17485 IPR029058 Alpha/Beta hydrolase fold BRM88_17490 IPR001310 Histidine triad (HIT) protein BRM88_17490 IPR026026 Histidine triad hydrolase, Hint-type BRM88_17490 IPR036265 BRM88_17490 BRM88_17505 IPR011962 Deoxycytidine triphosphate deaminase BRM88_17505 IPR029054 dUTPase-like BRM88_17505 IPR036157 BRM88_17505 BRM88_17510 IPR000808 Mrp, conserved site BRM88_17510 IPR019591 Mrp/NBP35 ATP-binding protein BRM88_17510 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_17510 IPR033756 BRM88_17510 BRM88_17525 IPR008753 Peptidase M13, N-terminal domain BRM88_17525 IPR018497 Peptidase M13, C-terminal domain BRM88_17525 IPR024079 Metallopeptidase, catalytic domain BRM88_17530 IPR022764 Peptidase S54, rhomboid domain BRM88_17530 IPR035952 BRM88_17530 BRM88_17535 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding BRM88_17535 IPR036217 BRM88_17535 BRM88_17535 IPR036388 BRM88_17535 BRM88_17545 IPR024442 Transposase, zinc-ribbon BRM88_17545 IPR024445 Transposase, ISXO2-like BRM88_17555 IPR006076 FAD dependent oxidoreductase BRM88_17555 IPR036188 BRM88_17555 BRM88_17560 IPR007349 Domain of unknown function DUF418 BRM88_17565 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain BRM88_17570 IPR000064 Endopeptidase, NLPC/P60 domain BRM88_17570 IPR038765 BRM88_17570 BRM88_17575 IPR000064 Endopeptidase, NLPC/P60 domain BRM88_17575 IPR038765 BRM88_17575 BRM88_17580 IPR006683 Thioesterase superfamily BRM88_17580 IPR029069 HotDog domain BRM88_17590 IPR001991 Sodium:dicarboxylate symporter BRM88_17590 IPR036458 BRM88_17590 BRM88_17595 IPR001952 Alkaline phosphatase BRM88_17595 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha BRM88_17595 IPR017850 Alkaline-phosphatase-like, core domain BRM88_17600 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase BRM88_17600 IPR012094 Lysidine-tRNA(Ile) synthetase BRM88_17600 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal BRM88_17600 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal BRM88_17600 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_17600 IPR015262 Lysidine-tRNA(Ile) synthetase, substrate-binding domain BRM88_17605 IPR003761 Exonuclease VII, small subunit BRM88_17605 IPR037004 BRM88_17605 BRM88_17610 IPR000092 Polyprenyl synthetase BRM88_17610 IPR008949 Terpenoid synthase BRM88_17610 IPR033749 BRM88_17610 BRM88_17620 IPR019109 Protein of unknown function DUF4870 BRM88_17635 IPR002510 TldD/PmbA BRM88_17635 IPR035068 BRM88_17635 BRM88_17635 IPR036059 BRM88_17635 BRM88_17640 IPR006839 Ribosome-associated, YjgA BRM88_17640 IPR023153 PSPTO4464-like domain BRM88_17645 IPR002510 TldD/PmbA BRM88_17645 IPR025502 TldD BRM88_17645 IPR035068 BRM88_17645 BRM88_17645 IPR036059 BRM88_17645 BRM88_17655 IPR011836 Conserved hypothetical protein CHP02099 BRM88_17655 IPR025263 Domain of unknown function DUF3971 BRM88_17655 IPR032712 BRM88_17655 BRM88_17660 IPR003029 Ribosomal protein S1, RNA-binding domain BRM88_17660 IPR004659 Ribonuclease E/G BRM88_17660 IPR012340 Nucleic acid-binding, OB-fold BRM88_17660 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G BRM88_17660 IPR022967 RNA-binding domain, S1 BRM88_17665 IPR003697 Maf-like protein BRM88_17665 IPR029001 Inosine triphosphate pyrophosphatase-like BRM88_17670 IPR007497 Protein of unknown function DUF541 BRM88_17680 IPR000531 TonB-dependent receptor, beta-barrel BRM88_17680 IPR012910 TonB-dependent receptor, plug BRM88_17680 IPR013784 Carbohydrate-binding-like fold BRM88_17680 IPR036942 BRM88_17680 BRM88_17680 IPR037066 BRM88_17680 BRM88_17695 IPR003742 SPOUT methyltransferase, predicted BRM88_17695 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BRM88_17695 IPR029028 Alpha/beta knot methyltransferases BRM88_17705 IPR008557 Protein of unknown function DUF839 BRM88_17710 IPR036869 BRM88_17710 BRM88_17715 IPR004394 Protein Iojap/ribosomal silencing factor RsfS BRM88_17720 IPR004821 Cytidyltransferase-like domain BRM88_17720 IPR005248 Probable nicotinate-nucleotide adenylyltransferase BRM88_17720 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_17725 IPR005790 DNA polymerase III, delta subunit BRM88_17725 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal BRM88_17725 IPR010372 DNA polymerase III, delta BRM88_17725 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_17730 IPR007485 Lipopolysaccharide assembly, LptE BRM88_17740 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BRM88_17740 IPR002300 Aminoacyl-tRNA synthetase, class Ia BRM88_17740 IPR002302 Leucine-tRNA ligase BRM88_17740 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain BRM88_17740 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding BRM88_17740 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding BRM88_17740 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_17740 IPR025709 Leucyl-tRNA synthetase, editing domain BRM88_17745 IPR009339 Protein of unknown function DUF998 BRM88_17750 IPR005746 Thioredoxin BRM88_17750 IPR011990 Tetratricopeptide-like helical domain BRM88_17750 IPR013766 Thioredoxin domain BRM88_17750 IPR017937 Thioredoxin, conserved site BRM88_17750 IPR036249 BRM88_17750 BRM88_17755 IPR027961 Protein of unknown function DUF4442 BRM88_17755 IPR029069 HotDog domain BRM88_17760 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 BRM88_17760 IPR032877 BRM88_17760 BRM88_17765 IPR024442 Transposase, zinc-ribbon BRM88_17765 IPR024445 Transposase, ISXO2-like BRM88_17785 IPR007211 Protein of unknown function DUF378 BRM88_17790 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain BRM88_17790 IPR029000 Cyclophilin-like domain BRM88_17800 IPR012337 Ribonuclease H-like domain BRM88_17800 IPR038721 BRM88_17800 BRM88_17805 IPR002559 Transposase, IS4-like BRM88_17805 IPR012337 Ribonuclease H-like domain BRM88_17820 IPR024442 Transposase, zinc-ribbon BRM88_17820 IPR024445 Transposase, ISXO2-like BRM88_17830 IPR004193 Glycoside hydrolase, family 13, N-terminal BRM88_17830 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BRM88_17830 IPR011837 Glycogen debranching enzyme, GlgX type BRM88_17830 IPR013780 Glycosyl hydrolase, family 13, all-beta BRM88_17830 IPR013783 Immunoglobulin-like fold BRM88_17830 IPR014756 Immunoglobulin E-set BRM88_17830 IPR017853 Glycoside hydrolase, superfamily BRM88_17835 IPR002559 Transposase, IS4-like BRM88_17835 IPR008490 Transposase InsH, N-terminal BRM88_17840 IPR002559 Transposase, IS4-like BRM88_17840 IPR008490 Transposase InsH, N-terminal BRM88_17850 IPR024442 Transposase, zinc-ribbon BRM88_17850 IPR024445 Transposase, ISXO2-like BRM88_17855 IPR025246 Transposase IS30-like HTH domain BRM88_17875 IPR001801 Histone-like protein H-NS BRM88_17875 IPR027444 Histone-like protein H-NS, C-terminal domain BRM88_17900 IPR002104 Integrase, catalytic BRM88_17900 IPR011010 DNA breaking-rejoining enzyme, catalytic core BRM88_17900 IPR013762 Integrase-like, catalytic core BRM88_17920 IPR001087 Lipase, GDSL BRM88_17920 IPR005546 Autotransporter beta-domain BRM88_17920 IPR017186 Lipase, autotransporter EstA BRM88_17920 IPR036514 BRM88_17920 BRM88_17920 IPR036709 BRM88_17920 BRM88_17925 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 BRM88_17925 IPR010035 ThiS, thiamine-biosynthesis BRM88_17925 IPR012675 Beta-grasp domain BRM88_17925 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BRM88_17935 IPR008867 Thiazole biosynthesis BRM88_17935 IPR013785 Aldolase-type TIM barrel BRM88_17935 IPR033983 BRM88_17935 BRM88_17945 IPR003358 tRNA (guanine-N-7) methyltransferase BRM88_17945 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_17950 IPR004680 Citrate transporter-like domain BRM88_17950 IPR006037 Regulator of K+ conductance, C-terminal BRM88_17950 IPR036721 BRM88_17950 BRM88_17955 IPR017941 Rieske [2Fe-2S] iron-sulphur domain BRM88_17955 IPR036922 BRM88_17955 BRM88_17975 IPR011234 Fumarylacetoacetase, C-terminal-related BRM88_17975 IPR036663 BRM88_17975 BRM88_17980 IPR001185 Large-conductance mechanosensitive channel BRM88_17980 IPR019823 Large-conductance mechanosensitive channel, conserved site BRM88_17980 IPR036019 BRM88_17980 BRM88_17980 IPR037673 BRM88_17980 BRM88_18005 IPR001537 tRNA/rRNA methyltransferase, SpoU type BRM88_18005 IPR013123 RNA 2-O ribose methyltransferase, substrate binding BRM88_18005 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BRM88_18005 IPR029028 Alpha/beta knot methyltransferases BRM88_18005 IPR029064 50S ribosomal protein L30e-like BRM88_18025 IPR024442 Transposase, zinc-ribbon BRM88_18025 IPR024445 Transposase, ISXO2-like BRM88_18035 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal BRM88_18035 IPR024571 ERAP1-like C-terminal domain BRM88_18040 IPR001036 Acriflavin resistance protein BRM88_18040 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BRM88_18045 IPR006143 RND efflux pump, membrane fusion protein BRM88_18045 IPR032317 BRM88_18045 BRM88_18055 IPR000795 Elongation factor, GTP-binding domain BRM88_18055 IPR002891 Adenylylsulphate kinase BRM88_18055 IPR009000 Translation protein, beta-barrel domain BRM88_18055 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BRM88_18055 IPR011779 Sulphate adenylyltransferase, large subunit BRM88_18055 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_18055 IPR031157 BRM88_18055 BRM88_18060 IPR002500 Phosphoadenosine phosphosulphate reductase BRM88_18060 IPR011784 Sulphate adenylyltransferase, small subunit BRM88_18060 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_18065 IPR001094 Flavodoxin BRM88_18065 IPR001433 Oxidoreductase FAD/NAD(P)-binding BRM88_18065 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase BRM88_18065 IPR003097 FAD-binding, type 1 BRM88_18065 IPR008254 Flavodoxin/nitric oxide synthase BRM88_18065 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain BRM88_18065 IPR017938 Riboflavin synthase-like beta-barrel BRM88_18065 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 BRM88_18065 IPR029039 Flavoprotein-like BRM88_18065 IPR039261 BRM88_18065 BRM88_18070 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain BRM88_18070 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site BRM88_18070 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain BRM88_18070 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit BRM88_18070 IPR036136 BRM88_18070 BRM88_18075 IPR002500 Phosphoadenosine phosphosulphate reductase BRM88_18075 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase BRM88_18075 IPR011800 Phosphoadenosine phosphosulphate reductase CysH BRM88_18075 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_18080 IPR005625 PepSY-associated TM helix BRM88_18085 IPR000531 TonB-dependent receptor, beta-barrel BRM88_18085 IPR012910 TonB-dependent receptor, plug BRM88_18085 IPR036942 BRM88_18085 BRM88_18085 IPR037066 BRM88_18085 BRM88_18090 IPR021333 Protein of unknown function DUF2946 BRM88_18095 IPR003018 GAF domain BRM88_18095 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_18095 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_18095 IPR029016 GAF domain-like BRM88_18095 IPR036097 BRM88_18095 BRM88_18095 IPR036890 BRM88_18095 BRM88_18120 IPR000847 Transcription regulator HTH, LysR BRM88_18120 IPR005119 LysR, substrate-binding BRM88_18120 IPR036388 BRM88_18120 BRM88_18120 IPR036390 BRM88_18120 BRM88_18125 IPR000878 Tetrapyrrole methylase BRM88_18125 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site BRM88_18125 IPR006366 Uroporphyrin-III C-methyltransferase BRM88_18125 IPR006367 Sirohaem synthase, N-terminal BRM88_18125 IPR012409 Sirohaem synthase BRM88_18125 IPR014776 Tetrapyrrole methylase, subdomain 2 BRM88_18125 IPR014777 Tetrapyrrole methylase, subdomain 1 BRM88_18125 IPR035996 BRM88_18125 BRM88_18125 IPR036291 BRM88_18125 BRM88_18130 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site BRM88_18130 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BRM88_18130 IPR005856 Cysteine synthase K/M BRM88_18130 IPR005859 Cysteine synthase A BRM88_18130 IPR036052 BRM88_18130 BRM88_18135 IPR007318 Phospholipid methyltransferase BRM88_18140 IPR002589 Macro domain BRM88_18145 IPR000741 Fructose-bisphosphate aldolase, class-I BRM88_18145 IPR013785 Aldolase-type TIM barrel BRM88_18145 IPR029768 Fructose-bisphosphate aldolase class-I active site BRM88_18150 IPR001697 Pyruvate kinase BRM88_18150 IPR011037 Pyruvate kinase-like, insert domain BRM88_18150 IPR015793 Pyruvate kinase, barrel BRM88_18150 IPR015795 Pyruvate kinase, C-terminal BRM88_18150 IPR015806 Pyruvate kinase, beta-barrel insert domain BRM88_18150 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain BRM88_18150 IPR018209 Pyruvate kinase, active site BRM88_18150 IPR036918 BRM88_18150 BRM88_18155 IPR006439 HAD hydrolase, subfamily IA BRM88_18155 IPR023198 Phosphoglycolate phosphatase, domain 2 BRM88_18155 IPR023214 HAD-like domain BRM88_18155 IPR036412 BRM88_18155 BRM88_18160 IPR001576 Phosphoglycerate kinase BRM88_18160 IPR015824 Phosphoglycerate kinase, N-terminal BRM88_18160 IPR015911 Phosphoglycerate kinase, conserved site BRM88_18160 IPR036043 BRM88_18160 BRM88_18170 IPR025060 Protein of unknown function DUF3999 BRM88_18175 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein BRM88_18175 IPR019286 Protein of unknown function DUF2339, transmembrane BRM88_18190 IPR036812 BRM88_18190 BRM88_18195 IPR002226 Catalase haem-binding site BRM88_18195 IPR010582 Catalase immune-responsive domain BRM88_18195 IPR011614 Catalase core domain BRM88_18195 IPR018028 Catalase, mono-functional, haem-containing BRM88_18195 IPR020835 Catalase-like domain BRM88_18195 IPR024708 Catalase active site BRM88_18195 IPR024712 Catalase, mono-functional, haem-containing, clade 2 BRM88_18195 IPR029062 Class I glutamine amidotransferase-like BRM88_18195 IPR037060 BRM88_18195 BRM88_18220 IPR002559 Transposase, IS4-like BRM88_18220 IPR008490 Transposase InsH, N-terminal BRM88_18230 IPR009057 Homeodomain-like BRM88_18230 IPR025959 Winged helix-turn helix domain BRM88_18230 IPR038717 BRM88_18230 BRM88_18240 IPR000014 PAS domain BRM88_18240 IPR009057 Homeodomain-like BRM88_18240 IPR013656 PAS fold-4 BRM88_18240 IPR018060 DNA binding HTH domain, AraC-type BRM88_18240 IPR018062 HTH domain AraC-type, conserved site BRM88_18240 IPR020449 Transcription regulator HTH, AraC- type BRM88_18240 IPR035965 BRM88_18240 BRM88_18270 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BRM88_18270 IPR011042 Six-bladed beta-propeller, TolB-like BRM88_18270 IPR011659 WD40-like Beta Propeller BRM88_18270 IPR029058 Alpha/Beta hydrolase fold BRM88_18280 IPR025737 MetA-pathway of phenol degradation, putative BRM88_18295 IPR002559 Transposase, IS4-like BRM88_18295 IPR008490 Transposase InsH, N-terminal BRM88_18300 IPR004813 Oligopeptide transporter, OPT superfamily BRM88_18300 IPR004814 Oligopeptide transporter HI_0561 BRM88_18305 IPR009003 Trypsin-like cysteine/serine peptidase domain BRM88_18310 IPR003607 HD/PDEase domain BRM88_18310 IPR013976 Metal-dependent hydrolase HDOD BRM88_18320 IPR003141 Polymerase/histidinol phosphatase, N-terminal BRM88_18320 IPR004013 PHP, C-terminal BRM88_18320 IPR004805 DNA polymerase III, alpha subunit BRM88_18320 IPR011708 Bacterial DNA polymerase III, alpha subunit BRM88_18320 IPR016195 Polymerase/histidinol phosphatase-like BRM88_18320 IPR023073 DNA polymerase, error-prone BRM88_18320 IPR029460 DNA polymerase, helix-hairpin-helix motif BRM88_18330 IPR001126 DNA-repair protein, UmuC-like BRM88_18335 IPR017166 Uncharacterised conserved protein UCP037290 BRM88_18335 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_18340 IPR006197 Peptidase S24, LexA-like BRM88_18340 IPR006199 LexA repressor, DNA-binding domain BRM88_18340 IPR006200 LexA repressor BRM88_18340 IPR015927 Peptidase S24/S26A/S26B/S26C BRM88_18340 IPR036286 BRM88_18340 BRM88_18340 IPR036388 BRM88_18340 BRM88_18340 IPR036390 BRM88_18340 BRM88_18345 IPR007159 AbrB-like domain BRM88_18345 IPR013432 Putative addiction module antidote BRM88_18345 IPR037914 BRM88_18345 BRM88_18350 IPR003812 Fido domain BRM88_18350 IPR006440 Death on curing protein BRM88_18350 IPR036597 BRM88_18350 BRM88_18370 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site BRM88_18370 IPR013078 Histidine phosphatase superfamily, clade-1 BRM88_18370 IPR029033 Histidine phosphatase superfamily BRM88_18375 IPR001647 DNA-binding HTH domain, TetR-type BRM88_18375 IPR009057 Homeodomain-like BRM88_18395 IPR000719 Protein kinase domain BRM88_18395 IPR011009 Protein kinase-like domain BRM88_18395 IPR017441 Protein kinase, ATP binding site BRM88_18405 IPR004473 Restriction endonuclease, type I, HsdR BRM88_18405 IPR006935 Helicase/UvrB domain BRM88_18405 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal BRM88_18405 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BRM88_18405 IPR021810 Protein of unknown function DUF3387 BRM88_18405 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_18415 IPR026001 Abortive infection protein-like, C-terminal domain BRM88_18425 IPR002559 Transposase, IS4-like BRM88_18425 IPR008490 Transposase InsH, N-terminal BRM88_18430 IPR000055 Restriction endonuclease, type I, HsdS BRM88_18435 IPR002559 Transposase, IS4-like BRM88_18435 IPR008490 Transposase InsH, N-terminal BRM88_18445 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 BRM88_18450 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BRM88_18450 IPR003356 DNA methylase, adenine-specific BRM88_18450 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain BRM88_18450 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_18450 IPR038333 BRM88_18450 BRM88_18455 IPR007560 Restriction endonuclease type IV, Mrr BRM88_18455 IPR011335 Restriction endonuclease type II-like BRM88_18455 IPR016984 Uncharacterised conserved protein UCP031853 BRM88_18460 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family BRM88_18460 IPR035093 BRM88_18460 BRM88_18470 IPR001650 Helicase, C-terminal BRM88_18470 IPR006935 Helicase/UvrB domain BRM88_18470 IPR013670 EcoEI R protein C-terminal domain BRM88_18470 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BRM88_18470 IPR025285 Domain of unknown function DUF4145 BRM88_18470 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_18475 IPR011664 Abortive infection system protein AbiD/AbiF-like BRM88_18480 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BRM88_18480 IPR003356 DNA methylase, adenine-specific BRM88_18480 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain BRM88_18480 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_18480 IPR038333 BRM88_18480 BRM88_18490 IPR000055 Restriction endonuclease, type I, HsdS BRM88_18495 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family BRM88_18495 IPR035093 BRM88_18495 BRM88_18530 IPR001584 Integrase, catalytic core BRM88_18530 IPR012337 Ribonuclease H-like domain BRM88_18530 IPR025246 Transposase IS30-like HTH domain BRM88_18530 IPR036397 BRM88_18530 BRM88_18580 IPR025391 Domain of unknown function DUF4123 BRM88_18585 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein BRM88_18585 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset BRM88_18585 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal BRM88_18585 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain BRM88_18585 IPR037026 BRM88_18585 BRM88_18595 IPR001270 ClpA/B family BRM88_18595 IPR003593 AAA+ ATPase domain BRM88_18595 IPR003959 ATPase, AAA-type, core BRM88_18595 IPR004176 Clp, N-terminal BRM88_18595 IPR017729 Type VI secretion system, ATPase ClpV1 BRM88_18595 IPR018368 ClpA/B, conserved site 1 BRM88_18595 IPR019489 Clp ATPase, C-terminal BRM88_18595 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_18595 IPR036628 BRM88_18595 BRM88_18600 IPR010732 Protein of unknown function DUF1305 BRM88_18605 IPR010272 Type VI secretion system, VCA0110 BRM88_18610 IPR007048 GpW/Gp25/anti-adapter protein IraD BRM88_18610 IPR017737 Type VI secretion system, lysozyme-related protein BRM88_18615 IPR008514 Type VI secretion system effector, Hcp BRM88_18615 IPR036624 BRM88_18615 BRM88_18620 IPR010269 Protein of unknown function DUF877 BRM88_18625 IPR008312 Uncharacterised conserved protein UCP028301 BRM88_18630 IPR011990 Tetratricopeptide-like helical domain BRM88_18635 IPR017734 Type VI secretion system, lipoprotein SciN BRM88_18635 IPR038706 BRM88_18635 BRM88_18640 IPR010263 Protein of unknown function DUF876 BRM88_18645 IPR017732 Type IV / VI secretion system, DotU BRM88_18645 IPR038522 BRM88_18645 BRM88_18650 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein BRM88_18650 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset BRM88_18650 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal BRM88_18650 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain BRM88_18650 IPR037026 BRM88_18650 BRM88_18665 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal BRM88_18670 IPR018712 Domain of unknown function DUF2235 BRM88_18675 IPR021733 Protein of unknown function DUF3304 BRM88_18680 IPR025391 Domain of unknown function DUF4123 BRM88_18685 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein BRM88_18685 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset BRM88_18685 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal BRM88_18685 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain BRM88_18685 IPR037026 BRM88_18685 BRM88_18690 IPR005532 Formylglycine-generating sulphatase enzyme domain BRM88_18690 IPR016187 C-type lectin fold BRM88_18700 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal BRM88_18705 IPR018712 Domain of unknown function DUF2235 BRM88_18710 IPR021733 Protein of unknown function DUF3304 BRM88_18715 IPR021733 Protein of unknown function DUF3304 BRM88_18725 IPR021733 Protein of unknown function DUF3304 BRM88_18730 IPR021733 Protein of unknown function DUF3304 BRM88_18735 IPR025391 Domain of unknown function DUF4123 BRM88_18740 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein BRM88_18740 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset BRM88_18740 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal BRM88_18740 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain BRM88_18740 IPR037026 BRM88_18740 BRM88_18750 IPR010657 ImpA, N-terminal BRM88_18750 IPR017740 Type VI secretion system-associated, ImpA BRM88_18755 IPR006664 Outer membrane protein, bacterial BRM88_18755 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal BRM88_18755 IPR036737 BRM88_18755 BRM88_18760 IPR017748 Type VI secretion system-associated, BMAA0400 BRM88_18760 IPR038225 BRM88_18760 BRM88_18775 IPR008727 PAAR motif BRM88_18780 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain BRM88_18780 IPR039561 BRM88_18780 BRM88_18795 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type BRM88_18795 IPR005862 Phosphoribosylglycinamide formyltransferase 2 BRM88_18795 IPR011054 Rudiment single hybrid motif BRM88_18795 IPR013815 ATP-grasp fold, subdomain 1 BRM88_18795 IPR016185 Pre-ATP-grasp domain BRM88_18810 IPR005569 Arc-like DNA binding BRM88_18810 IPR010985 Ribbon-helix-helix BRM88_18810 IPR013321 Arc-type ribbon-helix-helix BRM88_18815 IPR003709 Peptidase M15B/M15C BRM88_18815 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain BRM88_18820 IPR003265 HhH-GPD domain BRM88_18820 IPR011257 DNA glycosylase BRM88_18825 IPR006696 Protein of unknown function DUF423 BRM88_18830 IPR011256 Regulatory factor, effector binding domain BRM88_18830 IPR019587 Polyketide cyclase/dehydrase BRM88_18835 IPR000792 Transcription regulator LuxR, C-terminal BRM88_18835 IPR001789 Signal transduction response regulator, receiver domain BRM88_18835 IPR011006 CheY-like superfamily BRM88_18835 IPR016032 Signal transduction response regulator, C-terminal effector BRM88_18840 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain BRM88_18840 IPR036890 BRM88_18840 BRM88_18850 IPR000182 GNAT domain BRM88_18850 IPR016181 Acyl-CoA N-acyltransferase BRM88_18850 IPR016890 Uncharacterised conserved protein UCP028520 BRM88_18855 IPR005526 Septum formation inhibitor MinC, C-terminal BRM88_18855 IPR007874 Septum formation inhibitor MinC, N-terminal BRM88_18855 IPR013033 Septum formation inhibitor MinC BRM88_18855 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal BRM88_18855 IPR036145 BRM88_18855 BRM88_18855 IPR038061 BRM88_18855 BRM88_18860 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain BRM88_18860 IPR010223 ATP binding protein MinD, bacterial-type BRM88_18860 IPR025501 ATP binding protein MinD BRM88_18860 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_18865 IPR005527 Septum formation topological specificity factor MinE BRM88_18865 IPR036707 BRM88_18865 BRM88_18875 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_18875 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_18875 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_18875 IPR036097 BRM88_18875 BRM88_18875 IPR036890 BRM88_18875 BRM88_18880 IPR001789 Signal transduction response regulator, receiver domain BRM88_18880 IPR001867 Signal transduction response regulator, C-terminal BRM88_18880 IPR011006 CheY-like superfamily BRM88_18880 IPR036388 BRM88_18880 BRM88_18885 IPR038731 BRM88_18885 BRM88_18890 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BRM88_18890 IPR036938 BRM88_18890 BRM88_18895 IPR000917 Sulfatase BRM88_18895 IPR012549 Domain of unknown function DUF1705 BRM88_18895 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha BRM88_18895 IPR017850 Alkaline-phosphatase-like, core domain BRM88_18900 IPR001548 Peptidase M2, peptidyl-dipeptidase A BRM88_18915 IPR003439 ABC transporter-like BRM88_18915 IPR003593 AAA+ ATPase domain BRM88_18915 IPR005074 Peptidase C39, bacteriocin processing BRM88_18915 IPR011527 ABC transporter type 1, transmembrane domain BRM88_18915 IPR017871 ABC transporter, conserved site BRM88_18915 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_18915 IPR036640 BRM88_18915 BRM88_18920 IPR003997 RTX secretion protein D, Gram-negative bacteria BRM88_18920 IPR039562 BRM88_18920 BRM88_18925 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_18935 IPR003437 Glycine cleavage system P protein, homodimeric BRM88_18935 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BRM88_18935 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BRM88_18935 IPR015424 Pyridoxal phosphate-dependent transferase BRM88_18935 IPR020581 Glycine cleavage system P protein BRM88_18950 IPR014883 VRR-NUC domain BRM88_18955 IPR021815 Protein of unknown function DUF3396 BRM88_18960 IPR021815 Protein of unknown function DUF3396 BRM88_18975 IPR012337 Ribonuclease H-like domain BRM88_18975 IPR025246 Transposase IS30-like HTH domain BRM88_18985 IPR009057 Homeodomain-like BRM88_18985 IPR025959 Winged helix-turn helix domain BRM88_18985 IPR038717 BRM88_18985 BRM88_18990 IPR000456 Ribosomal protein L17 BRM88_18990 IPR036373 BRM88_18990 BRM88_18995 IPR011260 RNA polymerase, alpha subunit, C-terminal BRM88_18995 IPR011262 DNA-directed RNA polymerase, insert domain BRM88_18995 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type BRM88_18995 IPR011773 DNA-directed RNA polymerase, alpha subunit BRM88_18995 IPR036603 BRM88_18995 BRM88_18995 IPR036643 BRM88_18995 BRM88_19000 IPR001912 Ribosomal protein S4/S9, N-terminal BRM88_19000 IPR002942 RNA-binding S4 domain BRM88_19000 IPR005709 Ribosomal protein S4, bacterial-type BRM88_19000 IPR018079 Ribosomal protein S4, conserved site BRM88_19000 IPR036986 BRM88_19000 BRM88_19005 IPR001971 Ribosomal protein S11 BRM88_19005 IPR018102 Ribosomal S11, conserved site BRM88_19005 IPR019981 Ribosomal protein S11, bacterial-type BRM88_19005 IPR036967 BRM88_19005 BRM88_19010 IPR001892 Ribosomal protein S13 BRM88_19010 IPR010979 Ribosomal protein S13-like, H2TH BRM88_19010 IPR018269 Ribosomal protein S13, conserved site BRM88_19010 IPR019980 Ribosomal protein S13, bacterial-type BRM88_19010 IPR027437 30s ribosomal protein S13, C-terminal BRM88_19015 IPR002208 SecY/SEC61-alpha family BRM88_19015 IPR023201 SecY subunit domain BRM88_19015 IPR026593 Protein translocase subunit SecY BRM88_19015 IPR030659 BRM88_19015 BRM88_19020 IPR001196 Ribosomal protein L15, conserved site BRM88_19020 IPR005749 Ribosomal protein L15, bacterial-type BRM88_19020 IPR021131 Ribosomal protein L18e/L15P BRM88_19020 IPR030878 BRM88_19020 BRM88_19020 IPR036227 BRM88_19020 BRM88_19025 IPR005996 Ribosomal protein L30, bacterial-type BRM88_19025 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain BRM88_19025 IPR036919 BRM88_19025 BRM88_19030 IPR005324 Ribosomal protein S5, C-terminal BRM88_19030 IPR005712 Ribosomal protein S5, bacterial-type BRM88_19030 IPR013810 Ribosomal protein S5, N-terminal BRM88_19030 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BRM88_19030 IPR018192 Ribosomal protein S5, N-terminal, conserved site BRM88_19030 IPR020568 Ribosomal protein S5 domain 2-type fold BRM88_19035 IPR004389 Ribosomal protein L18, bacterial-type BRM88_19035 IPR005484 Ribosomal protein L18/L5 BRM88_19040 IPR000702 Ribosomal protein L6 BRM88_19040 IPR002358 Ribosomal protein L6, conserved site BRM88_19040 IPR019906 Ribosomal protein L6, bacterial-type BRM88_19040 IPR020040 Ribosomal protein L6, alpha-beta domain BRM88_19040 IPR036789 BRM88_19040 BRM88_19045 IPR000630 Ribosomal protein S8 BRM88_19045 IPR035987 BRM88_19045 BRM88_19050 IPR001209 Ribosomal protein S14 BRM88_19050 IPR023036 Ribosomal protein S14, bacterial/plastid BRM88_19055 IPR002132 Ribosomal protein L5 BRM88_19055 IPR020929 Ribosomal protein L5, conserved site BRM88_19055 IPR020930 Ribosomal protein L5, bacterial-type BRM88_19055 IPR022803 Ribosomal protein L5 domain BRM88_19055 IPR031309 BRM88_19055 BRM88_19055 IPR031310 BRM88_19055 BRM88_19060 IPR003256 Ribosomal protein L24 BRM88_19060 IPR005824 KOW BRM88_19060 IPR008991 Translation protein SH3-like domain BRM88_19060 IPR014722 Ribosomal protein L2 domain 2 BRM88_19065 IPR000218 Ribosomal protein L14b/L23e BRM88_19065 IPR005745 Ribosomal protein L14, bacterial-type BRM88_19065 IPR019972 Ribosomal protein L14 conserved site BRM88_19065 IPR036853 BRM88_19065 BRM88_19070 IPR000266 Ribosomal protein S17 BRM88_19070 IPR012340 Nucleic acid-binding, OB-fold BRM88_19070 IPR019984 Ribosomal protein S17, bacterial-type BRM88_19075 IPR001854 Ribosomal protein L29 BRM88_19075 IPR036049 BRM88_19075 BRM88_19080 IPR000114 Ribosomal protein L16 BRM88_19080 IPR016180 Ribosomal protein L10e/L16 BRM88_19080 IPR020798 Ribosomal protein L16, conserved site BRM88_19080 IPR036920 BRM88_19080 BRM88_19085 IPR001351 Ribosomal protein S3, C-terminal BRM88_19085 IPR004044 K Homology domain, type 2 BRM88_19085 IPR004087 K Homology domain BRM88_19085 IPR005704 Ribosomal protein S3, bacterial BRM88_19085 IPR009019 K homology domain, prokaryotic type BRM88_19085 IPR015946 K homology domain-like, alpha/beta BRM88_19085 IPR018280 Ribosomal protein S3, conserved site BRM88_19085 IPR036419 BRM88_19085 BRM88_19090 IPR001063 Ribosomal protein L22/L17 BRM88_19090 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type BRM88_19090 IPR018260 Ribosomal protein L22/L17, conserved site BRM88_19090 IPR036394 BRM88_19090 BRM88_19095 IPR002222 Ribosomal protein S19/S15 BRM88_19095 IPR005732 Ribosomal protein S19, bacterial-type BRM88_19095 IPR020934 Ribosomal protein S19 conserved site BRM88_19095 IPR023575 Ribosomal protein S19, superfamily BRM88_19100 IPR002171 Ribosomal protein L2 BRM88_19100 IPR005880 Ribosomal protein L2, bacterial/organellar-type BRM88_19100 IPR008991 Translation protein SH3-like domain BRM88_19100 IPR012340 Nucleic acid-binding, OB-fold BRM88_19100 IPR014722 Ribosomal protein L2 domain 2 BRM88_19100 IPR014726 Ribosomal protein L2, domain 3 BRM88_19100 IPR022666 Ribosomal Proteins L2, RNA binding domain BRM88_19100 IPR022669 Ribosomal protein L2, C-terminal BRM88_19100 IPR022671 Ribosomal protein L2, conserved site BRM88_19105 IPR012677 Nucleotide-binding, alpha-beta plait BRM88_19105 IPR012678 Ribosomal protein L23/L15e core domain BRM88_19105 IPR013025 Ribosomal protein L25/L23 BRM88_19110 IPR002136 Ribosomal protein L4/L1e BRM88_19110 IPR013005 Ribosomal protein L4/L1e, bacterial-type BRM88_19110 IPR023574 Ribosomal protein L4 domain BRM88_19115 IPR000597 Ribosomal protein L3 BRM88_19115 IPR009000 Translation protein, beta-barrel domain BRM88_19115 IPR019926 Ribosomal protein L3, conserved site BRM88_19115 IPR019927 Ribosomal protein L3, bacterial/organelle-type BRM88_19120 IPR001848 Ribosomal protein S10 BRM88_19120 IPR018268 Ribosomal protein S10, conserved site BRM88_19120 IPR027486 Ribosomal protein S10 domain BRM88_19120 IPR036838 BRM88_19120 BRM88_19135 IPR000795 Elongation factor, GTP-binding domain BRM88_19135 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal BRM88_19135 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 BRM88_19135 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle BRM88_19135 IPR005225 Small GTP-binding protein domain BRM88_19135 IPR009000 Translation protein, beta-barrel domain BRM88_19135 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BRM88_19135 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_19135 IPR031157 BRM88_19135 BRM88_19140 IPR000640 Translation elongation factor EFG, V domain BRM88_19140 IPR000795 Elongation factor, GTP-binding domain BRM88_19140 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 BRM88_19140 IPR004540 Translation elongation factor EFG/EF2 BRM88_19140 IPR005225 Small GTP-binding protein domain BRM88_19140 IPR005517 Translation elongation factor EFG/EF2, domain IV BRM88_19140 IPR009000 Translation protein, beta-barrel domain BRM88_19140 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BRM88_19140 IPR020568 Ribosomal protein S5 domain 2-type fold BRM88_19140 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_19140 IPR031157 BRM88_19140 BRM88_19140 IPR035647 BRM88_19140 BRM88_19145 IPR000235 Ribosomal protein S5/S7 BRM88_19145 IPR005717 Ribosomal protein S7, bacterial/organellar-type BRM88_19145 IPR020606 Ribosomal protein S7, conserved site BRM88_19145 IPR023798 Ribosomal protein S7 domain BRM88_19145 IPR036823 BRM88_19145 BRM88_19150 IPR005679 Ribosomal protein S12, bacteria BRM88_19150 IPR006032 Ribosomal protein S12/S23 BRM88_19150 IPR012340 Nucleic acid-binding, OB-fold BRM88_19155 IPR000722 RNA polymerase, alpha subunit BRM88_19155 IPR006592 RNA polymerase, N-terminal BRM88_19155 IPR007066 RNA polymerase Rpb1, domain 3 BRM88_19155 IPR007080 RNA polymerase Rpb1, domain 1 BRM88_19155 IPR007081 RNA polymerase Rpb1, domain 5 BRM88_19155 IPR007083 RNA polymerase Rpb1, domain 4 BRM88_19155 IPR012754 DNA-directed RNA polymerase, subunit beta-prime BRM88_19155 IPR038120 BRM88_19155 BRM88_19160 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 BRM88_19160 IPR007121 RNA polymerase, beta subunit, conserved site BRM88_19160 IPR007641 RNA polymerase Rpb2, domain 7 BRM88_19160 IPR007642 RNA polymerase Rpb2, domain 2 BRM88_19160 IPR007644 RNA polymerase, beta subunit, protrusion BRM88_19160 IPR007645 RNA polymerase Rpb2, domain 3 BRM88_19160 IPR010243 DNA-directed RNA polymerase, beta subunit BRM88_19160 IPR014724 RNA polymerase Rpb2, OB-fold BRM88_19160 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain BRM88_19160 IPR037033 BRM88_19160 BRM88_19160 IPR037034 BRM88_19160 BRM88_19165 IPR000206 Ribosomal protein L7/L12 BRM88_19165 IPR008932 Ribosomal protein L7/L12, oligomerisation BRM88_19165 IPR013823 Ribosomal protein L7/L12, C-terminal BRM88_19165 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BRM88_19165 IPR036235 BRM88_19165 BRM88_19170 IPR001790 Ribosomal protein L10/acidic P0 BRM88_19170 IPR022973 Ribosomal protein L10 BRM88_19175 IPR002143 Ribosomal protein L1 BRM88_19175 IPR005878 Ribosomal protein L1, bacterial-type BRM88_19175 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich BRM88_19175 IPR023673 Ribosomal protein L1, conserved site BRM88_19175 IPR023674 Ribosomal protein L1-like BRM88_19175 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein BRM88_19180 IPR000911 Ribosomal protein L11/L12 BRM88_19180 IPR006519 Ribosomal protein L11, bacterial-type BRM88_19180 IPR020783 Ribosomal protein L11, C-terminal BRM88_19180 IPR020784 Ribosomal protein L11, N-terminal BRM88_19180 IPR020785 Ribosomal protein L11, conserved site BRM88_19180 IPR036769 BRM88_19180 BRM88_19180 IPR036796 BRM88_19180 BRM88_19190 IPR001062 Transcription antitermination protein, NusG BRM88_19190 IPR005824 KOW BRM88_19190 IPR006645 NusG, N-terminal BRM88_19190 IPR008991 Translation protein SH3-like domain BRM88_19190 IPR014722 Ribosomal protein L2 domain 2 BRM88_19190 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site BRM88_19190 IPR036735 BRM88_19190 BRM88_19195 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit BRM88_19195 IPR005807 SecE subunit of protein translocation complex BRM88_19195 IPR038379 BRM88_19195 BRM88_19205 IPR000795 Elongation factor, GTP-binding domain BRM88_19205 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal BRM88_19205 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 BRM88_19205 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle BRM88_19205 IPR005225 Small GTP-binding protein domain BRM88_19205 IPR009000 Translation protein, beta-barrel domain BRM88_19205 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BRM88_19205 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_19205 IPR031157 BRM88_19205 BRM88_19225 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 BRM88_19225 IPR006073 GTP binding domain BRM88_19225 IPR012675 Beta-grasp domain BRM88_19225 IPR012676 TGS-like BRM88_19225 IPR013029 Domain of unknown function DUF933 BRM88_19225 IPR023192 TGS-like domain BRM88_19225 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_19230 IPR001328 Peptidyl-tRNA hydrolase BRM88_19230 IPR018171 Peptidyl-tRNA hydrolase, conserved site BRM88_19230 IPR036416 BRM88_19230 BRM88_19235 IPR001021 Ribosomal protein L25, long-form BRM88_19235 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain BRM88_19235 IPR020055 Ribosomal protein L25, short-form BRM88_19235 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain BRM88_19235 IPR020057 Ribosomal protein L25, beta domain BRM88_19235 IPR029751 Ribosomal protein L25 BRM88_19235 IPR037121 BRM88_19235 BRM88_19240 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site BRM88_19240 IPR005946 Ribose-phosphate diphosphokinase BRM88_19240 IPR029057 Phosphoribosyltransferase-like BRM88_19240 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain BRM88_19240 IPR037515 BRM88_19240 BRM88_19250 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase BRM88_19250 IPR006204 GHMP kinase N-terminal domain BRM88_19250 IPR013750 GHMP kinase, C-terminal domain BRM88_19250 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BRM88_19250 IPR020568 Ribosomal protein S5 domain 2-type fold BRM88_19250 IPR036554 BRM88_19250 BRM88_19255 IPR004565 Outer membrane lipoprotein LolB BRM88_19255 IPR029046 Lipoprotein localisation LolA/LolB/LppX BRM88_19260 IPR011990 Tetratricopeptide-like helical domain BRM88_19260 IPR019734 Tetratricopeptide repeat BRM88_19265 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase BRM88_19265 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase BRM88_19265 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal BRM88_19265 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain BRM88_19265 IPR018214 Glutamyl-tRNA reductase, conserved site BRM88_19265 IPR036291 BRM88_19265 BRM88_19265 IPR036343 BRM88_19265 BRM88_19265 IPR036453 BRM88_19265 BRM88_19270 IPR000352 Peptide chain release factor class I/class II BRM88_19270 IPR004373 Peptide chain release factor 1 BRM88_19270 IPR005139 Peptide chain release factor BRM88_19275 IPR011990 Tetratricopeptide-like helical domain BRM88_19275 IPR019734 Tetratricopeptide repeat BRM88_19275 IPR029489 O-GlcNAc transferase, C-terminal BRM88_19280 IPR001453 Molybdopterin binding domain BRM88_19280 IPR012245 Molybdenum cofactor biosynthesis protein MoaB BRM88_19280 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria BRM88_19280 IPR036425 BRM88_19280 BRM88_19285 IPR016898 Polyphosphate kinase 2 BRM88_19285 IPR022486 Polyphosphate kinase 2, PA0141 BRM88_19285 IPR022488 Polyphosphate kinase-2-related BRM88_19285 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_19295 IPR001792 Acylphosphatase-like domain BRM88_19295 IPR036046 BRM88_19295 BRM88_19300 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant BRM88_19300 IPR017937 Thioredoxin, conserved site BRM88_19300 IPR036249 BRM88_19300 BRM88_19305 IPR017039 Virulence factor BrkB BRM88_19305 IPR023679 Uncharacterised protein family UPF0761, bacterial BRM88_19310 IPR005025 NADPH-dependent FMN reductase-like BRM88_19310 IPR010089 Flavoprotein WrbA BRM88_19310 IPR029039 Flavoprotein-like BRM88_19315 IPR018643 Protein of unknown function DUF2069, membrane BRM88_19325 IPR013780 Glycosyl hydrolase, family 13, all-beta BRM88_19325 IPR017853 Glycoside hydrolase, superfamily BRM88_19325 IPR033452 BRM88_19325 BRM88_19325 IPR033453 BRM88_19325 BRM88_19330 IPR006034 Asparaginase/glutaminase BRM88_19330 IPR027474 L-asparaginase, N-terminal BRM88_19330 IPR036152 BRM88_19330 BRM88_19330 IPR037152 BRM88_19330 BRM88_19335 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC BRM88_19335 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain BRM88_19335 IPR036754 BRM88_19335 BRM88_19345 IPR001544 Aminotransferase, class IV BRM88_19345 IPR005786 Branched-chain amino acid aminotransferase II BRM88_19345 IPR018300 Aminotransferase, class IV, conserved site BRM88_19345 IPR036038 BRM88_19345 BRM88_19350 IPR002744 Domain of unknown function DUF59 BRM88_19350 IPR017776 FeS assembly SUF system protein SufT, putative BRM88_19350 IPR034904 BRM88_19350 BRM88_19375 IPR012136 NADP transhydrogenase, beta subunit BRM88_19375 IPR029035 DHS-like NAD/FAD-binding domain BRM88_19375 IPR034300 BRM88_19375 BRM88_19380 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal BRM88_19385 IPR007627 RNA polymerase sigma-70 region 2 BRM88_19385 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BRM88_19385 IPR013324 RNA polymerase sigma factor, region 3/4 BRM88_19385 IPR013325 RNA polymerase sigma factor, region 2 BRM88_19385 IPR014284 RNA polymerase sigma-70 like domain BRM88_19385 IPR036388 BRM88_19385 BRM88_19395 IPR021455 Protein of unknown function DUF3106 BRM88_19400 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain BRM88_19400 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal BRM88_19400 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 BRM88_19400 IPR036291 BRM88_19400 BRM88_19405 IPR012434 Protein of unknown function DUF1631 BRM88_19410 IPR000415 Nitroreductase-like BRM88_19410 IPR026021 Putative NAD(P)H nitroreductase YdjA-like BRM88_19410 IPR029479 Nitroreductase BRM88_19415 IPR002421 5'-3' exonuclease, N-terminal BRM88_19415 IPR008918 Helix-hairpin-helix motif, class 2 BRM88_19415 IPR020045 5'-3' exonuclease, C-terminal domain BRM88_19415 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal BRM88_19415 IPR029060 PIN domain-like BRM88_19415 IPR036279 BRM88_19415 BRM88_19420 IPR000086 NUDIX hydrolase domain BRM88_19420 IPR015797 NUDIX hydrolase domain-like BRM88_19425 IPR007709 N-formylglutamate amidohydrolase BRM88_19425 IPR011227 Uncharacterised conserved protein UCP029730 BRM88_19430 IPR000073 Alpha/beta hydrolase fold-1 BRM88_19430 IPR002410 Peptidase S33 BRM88_19430 IPR005944 Proline iminopeptidase BRM88_19430 IPR029058 Alpha/Beta hydrolase fold BRM88_19460 IPR001584 Integrase, catalytic core BRM88_19460 IPR012337 Ribonuclease H-like domain BRM88_19460 IPR025246 Transposase IS30-like HTH domain BRM88_19460 IPR036397 BRM88_19460 BRM88_19465 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BRM88_19465 IPR004556 Modification methylase HemK BRM88_19465 IPR007848 Methyltransferase small domain BRM88_19465 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific BRM88_19465 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_19470 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant BRM88_19470 IPR017559 Alkyl hydroperoxide reductase subunit C BRM88_19470 IPR019479 Peroxiredoxin, C-terminal BRM88_19470 IPR024706 Peroxiredoxin, AhpC-type BRM88_19470 IPR036249 BRM88_19470 BRM88_19475 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II BRM88_19475 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site BRM88_19475 IPR012081 Alkyl hydroperoxide reductase subunit F BRM88_19475 IPR012336 Thioredoxin-like fold BRM88_19475 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain BRM88_19475 IPR036188 BRM88_19475 BRM88_19475 IPR036249 BRM88_19475 BRM88_19480 IPR000847 Transcription regulator HTH, LysR BRM88_19480 IPR005119 LysR, substrate-binding BRM88_19480 IPR036388 BRM88_19480 BRM88_19480 IPR036390 BRM88_19480 BRM88_19490 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal BRM88_19490 IPR023459 Transcription elongation factor GreA/GreB family BRM88_19490 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain BRM88_19490 IPR036953 BRM88_19490 BRM88_19495 IPR001585 Transaldolase BRM88_19495 IPR004730 Transaldolase type 1 BRM88_19495 IPR013785 Aldolase-type TIM barrel BRM88_19495 IPR018225 Transaldolase, active site BRM88_19505 IPR024442 Transposase, zinc-ribbon BRM88_19505 IPR024445 Transposase, ISXO2-like BRM88_19520 IPR002818 ThiJ/PfpI BRM88_19520 IPR029062 Class I glutamine amidotransferase-like BRM88_19530 IPR002569 Peptide methionine sulphoxide reductase MsrA BRM88_19530 IPR036509 BRM88_19530 BRM88_19535 IPR011944 Steroid delta5-4-isomerase BRM88_19535 IPR013543 Calcium/calmodulin-dependent protein kinase II, association-domain BRM88_19535 IPR016887 Uncharacterised conserved protein UCP028470, steroid isomerase-related BRM88_19535 IPR032710 BRM88_19535 BRM88_19560 IPR003779 Carboxymuconolactone decarboxylase-like BRM88_19560 IPR004675 Alkylhydroperoxidase AhpD core BRM88_19560 IPR029032 AhpD-like BRM88_19565 IPR002109 Glutaredoxin BRM88_19565 IPR011767 Glutaredoxin active site BRM88_19565 IPR011900 Glutaredoxin, GrxC BRM88_19565 IPR014025 Glutaredoxin subgroup BRM88_19565 IPR036249 BRM88_19565 BRM88_19570 IPR001915 Peptidase M48 BRM88_19570 IPR011990 Tetratricopeptide-like helical domain BRM88_19570 IPR030873 BRM88_19570 BRM88_19575 IPR001789 Signal transduction response regulator, receiver domain BRM88_19575 IPR001867 Signal transduction response regulator, C-terminal BRM88_19575 IPR011006 CheY-like superfamily BRM88_19575 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB BRM88_19575 IPR016032 Signal transduction response regulator, C-terminal effector BRM88_19575 IPR036388 BRM88_19575 BRM88_19580 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_19580 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_19580 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_19580 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR BRM88_19580 IPR021766 Protein of unknown function DUF3329 BRM88_19580 IPR035965 BRM88_19580 BRM88_19580 IPR036097 BRM88_19580 BRM88_19580 IPR036890 BRM88_19580 BRM88_19585 IPR003414 Polyphosphate kinase BRM88_19585 IPR024953 Polyphosphate kinase middle domain BRM88_19585 IPR025198 Polyphosphate kinase N-terminal domain BRM88_19585 IPR025200 Polyphosphate kinase C-terminal domain BRM88_19585 IPR036830 BRM88_19585 BRM88_19585 IPR036832 BRM88_19585 BRM88_19590 IPR003695 Ppx/GppA phosphatase BRM88_19590 IPR022371 Exopolyphosphatase BRM88_19590 IPR030673 BRM88_19590 BRM88_19595 IPR001296 Glycosyl transferase, family 1 BRM88_19595 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain BRM88_19600 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BRM88_19600 IPR036938 BRM88_19600 BRM88_19605 IPR004843 Calcineurin-like phosphoesterase domain, apaH type BRM88_19605 IPR010138 UDP-2,3-diacylglucosamine hydrolase BRM88_19605 IPR029052 Metallo-dependent phosphatase-like BRM88_19625 IPR007402 Protein of unknown function DUF455 BRM88_19625 IPR009078 Ferritin-like superfamily BRM88_19625 IPR011197 Uncharacterised conserved protein UCP012318 BRM88_19630 IPR005854 Amidophosphoribosyl transferase BRM88_19630 IPR029055 Nucleophile aminohydrolases, N-terminal BRM88_19630 IPR029057 Phosphoribosyltransferase-like BRM88_19635 IPR003825 Colicin V production, CvpA BRM88_19640 IPR007730 Sporulation-related domain BRM88_19640 IPR036680 BRM88_19640 BRM88_19645 IPR001645 Folylpolyglutamate synthetase BRM88_19645 IPR013221 Mur ligase, central BRM88_19645 IPR036565 BRM88_19645 BRM88_19645 IPR036615 BRM88_19645 BRM88_19655 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site BRM88_19655 IPR013078 Histidine phosphatase superfamily, clade-1 BRM88_19655 IPR029033 Histidine phosphatase superfamily BRM88_19660 IPR009003 Trypsin-like cysteine/serine peptidase domain BRM88_19660 IPR019500 Peptidase S46 BRM88_19670 IPR000531 TonB-dependent receptor, beta-barrel BRM88_19670 IPR010917 TonB-dependent receptor, conserved site BRM88_19670 IPR012910 TonB-dependent receptor, plug BRM88_19670 IPR037066 BRM88_19670 BRM88_19680 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site BRM88_19680 IPR004627 L-threonine 3-dehydrogenase BRM88_19680 IPR011032 GroES (chaperonin 10)-like BRM88_19680 IPR013149 Alcohol dehydrogenase, C-terminal BRM88_19680 IPR013154 Alcohol dehydrogenase GroES-like BRM88_19680 IPR020843 Polyketide synthase, enoylreductase BRM88_19680 IPR036291 BRM88_19680 BRM88_19685 IPR010239 Conserved hypothetical protein CHP02001 BRM88_19690 IPR003439 ABC transporter-like BRM88_19690 IPR003593 AAA+ ATPase domain BRM88_19690 IPR005666 Sulphate transport system permease protein 1 BRM88_19690 IPR008995 Molybdate/tungstate binding, C-terminal BRM88_19690 IPR017871 ABC transporter, conserved site BRM88_19690 IPR024765 TOBE-like domain BRM88_19690 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_19695 IPR000515 MetI-like domain BRM88_19695 IPR005667 Sulphate ABC transporter permease protein 2 BRM88_19695 IPR011866 Sulphate ABC transporter, permease protein CysW BRM88_19695 IPR035906 BRM88_19695 BRM88_19700 IPR000515 MetI-like domain BRM88_19700 IPR005667 Sulphate ABC transporter permease protein 2 BRM88_19700 IPR011865 Sulphate ABC transporter, permease protein CysT BRM88_19700 IPR035906 BRM88_19700 BRM88_19705 IPR005669 Thiosulphate/Sulfate-binding protein BRM88_19705 IPR034408 BRM88_19705 BRM88_19710 IPR004839 Aminotransferase, class I/classII BRM88_19710 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase BRM88_19710 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BRM88_19710 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BRM88_19710 IPR015424 Pyridoxal phosphate-dependent transferase BRM88_19720 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BRM88_19720 IPR002942 RNA-binding S4 domain BRM88_19720 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F BRM88_19720 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site BRM88_19720 IPR020103 Pseudouridine synthase, catalytic domain BRM88_19720 IPR036986 BRM88_19720 BRM88_19730 IPR006664 Outer membrane protein, bacterial BRM88_19730 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal BRM88_19730 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel BRM88_19730 IPR027385 Outer membrane protein beta-barrel BRM88_19730 IPR028974 TSP type-3 repeat BRM88_19730 IPR036737 BRM88_19730 BRM88_19740 IPR011032 GroES (chaperonin 10)-like BRM88_19740 IPR013154 Alcohol dehydrogenase GroES-like BRM88_19740 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 BRM88_19740 IPR020843 Polyketide synthase, enoylreductase BRM88_19740 IPR036291 BRM88_19740 BRM88_19745 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal BRM88_19745 IPR013785 Aldolase-type TIM barrel BRM88_19745 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain BRM88_19745 IPR036188 BRM88_19745 BRM88_19750 IPR036259 BRM88_19750 BRM88_19790 IPR001789 Signal transduction response regulator, receiver domain BRM88_19790 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_19790 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_19790 IPR011006 CheY-like superfamily BRM88_19790 IPR036890 BRM88_19790 BRM88_19795 IPR001789 Signal transduction response regulator, receiver domain BRM88_19795 IPR011006 CheY-like superfamily BRM88_19800 IPR018551 Domain of unknown function DUF2007 BRM88_19805 IPR004045 Glutathione S-transferase, N-terminal BRM88_19805 IPR036249 BRM88_19805 BRM88_19805 IPR036282 BRM88_19805 BRM88_19815 IPR000924 Glutamyl/glutaminyl-tRNA synthetase BRM88_19815 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BRM88_19815 IPR004514 Glutamine-tRNA synthetase BRM88_19815 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain BRM88_19815 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_19815 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain BRM88_19815 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain BRM88_19815 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain BRM88_19815 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain BRM88_19815 IPR022861 Glutamine-tRNA ligase, bacterial BRM88_19835 IPR025246 Transposase IS30-like HTH domain BRM88_19870 IPR002125 CMP/dCMP deaminase, zinc-binding BRM88_19870 IPR016193 Cytidine deaminase-like BRM88_19875 IPR002877 Ribosomal RNA methyltransferase FtsJ domain BRM88_19875 IPR011224 Ribosomal RNA large subunit methyltransferase M BRM88_19875 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_19880 IPR000683 Oxidoreductase, N-terminal BRM88_19880 IPR008354 Glucose-fructose oxidoreductase, bacterial BRM88_19880 IPR036291 BRM88_19880 BRM88_19885 IPR005511 Senescence marker protein-30 (SMP-30) BRM88_19885 IPR011042 Six-bladed beta-propeller, TolB-like BRM88_19885 IPR013658 SMP-30/Gluconolactonase/LRE-like region BRM88_19895 IPR002048 EF-hand domain BRM88_19895 IPR011992 EF-hand domain pair BRM88_19900 IPR000835 MarR-type HTH domain BRM88_19900 IPR036388 BRM88_19900 BRM88_19900 IPR036390 BRM88_19900 BRM88_19905 IPR001753 Crotonase superfamily BRM88_19905 IPR029045 ClpP/crotonase-like domain BRM88_19910 IPR015590 Aldehyde dehydrogenase domain BRM88_19910 IPR016161 Aldehyde/histidinol dehydrogenase BRM88_19910 IPR016162 Aldehyde dehydrogenase, N-terminal BRM88_19910 IPR016163 Aldehyde dehydrogenase, C-terminal BRM88_19915 IPR000873 AMP-dependent synthetase/ligase BRM88_19915 IPR020845 AMP-binding, conserved site BRM88_19915 IPR025110 AMP-binding enzyme C-terminal domain BRM88_19920 IPR000847 Transcription regulator HTH, LysR BRM88_19920 IPR005119 LysR, substrate-binding BRM88_19920 IPR036388 BRM88_19920 BRM88_19920 IPR036390 BRM88_19920 BRM88_19930 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B BRM88_19945 IPR024442 Transposase, zinc-ribbon BRM88_19945 IPR024445 Transposase, ISXO2-like BRM88_19955 IPR029058 Alpha/Beta hydrolase fold BRM88_19960 IPR002938 Monooxygenase, FAD-binding BRM88_19960 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 BRM88_19960 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site BRM88_19960 IPR036188 BRM88_19960 BRM88_19965 IPR002938 Monooxygenase, FAD-binding BRM88_19965 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 BRM88_19965 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase BRM88_19965 IPR036188 BRM88_19965 BRM88_19975 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like BRM88_19975 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type BRM88_19975 IPR036451 BRM88_19975 BRM88_19980 IPR000286 Histone deacetylase superfamily BRM88_19980 IPR023696 Ureohydrolase domain BRM88_19980 IPR023801 Histone deacetylase domain BRM88_19980 IPR037138 BRM88_19980 BRM88_19985 IPR005653 Organic solvent tolerance-like, N-terminal BRM88_19985 IPR007543 Organic solvent tolerance protein, C-terminal BRM88_19985 IPR020889 Lipopolysaccharide assembly, LptD BRM88_19990 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type BRM88_19990 IPR015391 SurA N-terminal BRM88_19990 IPR023034 Peptidyl-prolyl isomerase SurA BRM88_19990 IPR027304 Trigger factor/SurA domain BRM88_19995 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA BRM88_19995 IPR037510 BRM88_19995 BRM88_20005 IPR001737 Ribosomal RNA adenine methylase transferase BRM88_20005 IPR011530 Ribosomal RNA adenine dimethylase BRM88_20005 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site BRM88_20005 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal BRM88_20005 IPR023165 rRNA adenine dimethylase-like BRM88_20005 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_20010 IPR007474 ApaG domain BRM88_20010 IPR023065 Uncharacterised protein family ApaG BRM88_20010 IPR036767 BRM88_20010 BRM88_20015 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) BRM88_20015 IPR004843 Calcineurin-like phosphoesterase domain, apaH type BRM88_20015 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase BRM88_20015 IPR029052 Metallo-dependent phosphatase-like BRM88_20020 IPR001796 Dihydrofolate reductase domain BRM88_20020 IPR012259 Dihydrofolate reductase BRM88_20020 IPR017925 Dihydrofolate reductase conserved site BRM88_20020 IPR024072 Dihydrofolate reductase-like domain BRM88_20030 IPR000398 Thymidylate synthase BRM88_20030 IPR020940 Thymidylate synthase, active site BRM88_20030 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain BRM88_20030 IPR036926 BRM88_20030 BRM88_20035 IPR001640 Prolipoprotein diacylglyceryl transferase BRM88_20040 IPR007621 TPM domain BRM88_20045 IPR007621 TPM domain BRM88_20050 IPR007156 LemA BRM88_20050 IPR023353 LemA-like domain BRM88_20055 IPR000829 Diacylglycerol kinase, prokaryotic BRM88_20055 IPR036945 BRM88_20055 BRM88_20060 IPR036514 BRM88_20060 BRM88_20065 IPR002559 Transposase, IS4-like BRM88_20065 IPR012337 Ribonuclease H-like domain BRM88_20080 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_20080 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_20080 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_20080 IPR036097 BRM88_20080 BRM88_20080 IPR036890 BRM88_20080 BRM88_20090 IPR013830 BRM88_20090 BRM88_20090 IPR036514 BRM88_20090 BRM88_20095 IPR003439 ABC transporter-like BRM88_20095 IPR003593 AAA+ ATPase domain BRM88_20095 IPR017871 ABC transporter, conserved site BRM88_20095 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_20100 IPR003838 Permease FtsX-like BRM88_20105 IPR003819 Taurine catabolism dioxygenase TauD/TfdA BRM88_20115 IPR003439 ABC transporter-like BRM88_20115 IPR003593 AAA+ ATPase domain BRM88_20115 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_20125 IPR007437 Protein of unknown function DUF486 BRM88_20150 IPR019600 Hemin uptake protein HemP BRM88_20155 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related BRM88_20155 IPR023210 NADP-dependent oxidoreductase domain BRM88_20155 IPR036812 BRM88_20155 BRM88_20165 IPR002668 Concentrative nucleoside transporter N-terminal domain BRM88_20165 IPR011642 Nucleoside recognition Gate BRM88_20165 IPR011657 Concentrative nucleoside transporter C-terminal domain BRM88_20170 IPR002139 Ribokinase BRM88_20170 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BRM88_20170 IPR011611 Carbohydrate kinase PfkB BRM88_20170 IPR011877 Ribokinase, bacterial BRM88_20170 IPR029056 Ribokinase-like BRM88_20185 IPR005084 Carbohydrate binding module family 6 BRM88_20185 IPR008979 Galactose-binding domain-like BRM88_20185 IPR011071 Polysaccharide lyase family 8-like, C-terminal BRM88_20185 IPR013190 Glycosyl hydrolase family 98, C-terminal domain BRM88_20185 IPR013191 Glycosyl hydrolase family 98 BRM88_20190 IPR001269 tRNA-dihydrouridine synthase BRM88_20190 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 BRM88_20190 IPR013785 Aldolase-type TIM barrel BRM88_20190 IPR018517 tRNA-dihydrouridine synthase, conserved site BRM88_20190 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal BRM88_20190 IPR032887 BRM88_20190 BRM88_20205 IPR002133 S-adenosylmethionine synthetase BRM88_20205 IPR022628 S-adenosylmethionine synthetase, N-terminal BRM88_20205 IPR022629 S-adenosylmethionine synthetase, central domain BRM88_20205 IPR022630 S-adenosylmethionine synthetase, C-terminal BRM88_20205 IPR022631 S-adenosylmethionine synthetase, conserved site BRM88_20205 IPR022636 S-adenosylmethionine synthetase superfamily BRM88_20215 IPR000560 Histidine phosphatase superfamily, clade-2 BRM88_20215 IPR029033 Histidine phosphatase superfamily BRM88_20215 IPR033379 BRM88_20215 BRM88_20220 IPR000531 TonB-dependent receptor, beta-barrel BRM88_20220 IPR010104 Bacterial TonB-dependent receptor BRM88_20220 IPR012910 TonB-dependent receptor, plug BRM88_20220 IPR037066 BRM88_20220 BRM88_20235 IPR012337 Ribonuclease H-like domain BRM88_20235 IPR038721 BRM88_20235 BRM88_20245 IPR001647 DNA-binding HTH domain, TetR-type BRM88_20245 IPR009057 Homeodomain-like BRM88_20245 IPR036271 BRM88_20245 BRM88_20250 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain BRM88_20250 IPR018129 Phosphoenolpyruvate carboxylase, active site BRM88_20250 IPR021135 Phosphoenolpyruvate carboxylase BRM88_20250 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type BRM88_20250 IPR033129 BRM88_20250 BRM88_20255 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BRM88_20255 IPR029058 Alpha/Beta hydrolase fold BRM88_20260 IPR000043 Adenosylhomocysteinase BRM88_20260 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BRM88_20260 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site BRM88_20260 IPR034373 BRM88_20260 BRM88_20260 IPR036291 BRM88_20260 BRM88_20265 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_20270 IPR000863 Sulfotransferase domain BRM88_20270 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_20275 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_20280 IPR021610 Protein of unknown function DUF3228 BRM88_20285 IPR018636 Protein of unknown function DUF2058 BRM88_20300 IPR000683 Oxidoreductase, N-terminal BRM88_20300 IPR036291 BRM88_20300 BRM88_20315 IPR000209 Peptidase S8/S53 domain BRM88_20315 IPR023828 Peptidase S8, subtilisin, Ser-active site BRM88_20315 IPR036852 BRM88_20315 BRM88_20320 IPR011032 GroES (chaperonin 10)-like BRM88_20320 IPR013154 Alcohol dehydrogenase GroES-like BRM88_20320 IPR014189 Quinone oxidoreductase PIG3 BRM88_20320 IPR020843 Polyketide synthase, enoylreductase BRM88_20320 IPR036291 BRM88_20320 BRM88_20330 IPR006103 Glycoside hydrolase, family 2, TIM barrel BRM88_20330 IPR017853 Glycoside hydrolase, superfamily BRM88_20335 IPR003171 Methylenetetrahydrofolate reductase BRM88_20335 IPR004620 5,10-methylenetetrahydrofolate reductase BRM88_20335 IPR029041 FAD-linked oxidoreductase-like BRM88_20350 IPR000086 NUDIX hydrolase domain BRM88_20350 IPR003561 Mutator MutT BRM88_20350 IPR013785 Aldolase-type TIM barrel BRM88_20350 IPR015797 NUDIX hydrolase domain-like BRM88_20350 IPR020084 NUDIX hydrolase, conserved site BRM88_20350 IPR020476 NUDIX hydrolase BRM88_20350 IPR022998 Thiamin phosphate synthase superfamily BRM88_20350 IPR036206 BRM88_20350 BRM88_20355 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BRM88_20360 IPR000185 Protein translocase subunit SecA BRM88_20360 IPR004027 SEC-C motif BRM88_20360 IPR011115 SecA DEAD-like, N-terminal BRM88_20360 IPR011116 SecA Wing/Scaffold BRM88_20360 IPR011130 SecA preprotein, cross-linking domain BRM88_20360 IPR020937 SecA conserved site BRM88_20360 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_20360 IPR036266 BRM88_20360 BRM88_20360 IPR036670 BRM88_20360 BRM88_20365 IPR011055 Duplicated hybrid motif BRM88_20365 IPR016047 Peptidase M23 BRM88_20370 IPR007922 Protein of unknown function DUF721/UPF0232 BRM88_20375 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase BRM88_20375 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal BRM88_20375 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal BRM88_20375 IPR020568 Ribosomal protein S5 domain 2-type fold BRM88_20380 IPR000158 Cell division protein FtsZ BRM88_20380 IPR003008 Tubulin/FtsZ, GTPase domain BRM88_20380 IPR008280 Tubulin/FtsZ, C-terminal BRM88_20380 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain BRM88_20380 IPR020805 Cell division protein FtsZ, conserved site BRM88_20380 IPR024757 Cell division protein FtsZ, C-terminal BRM88_20380 IPR036525 BRM88_20380 BRM88_20385 IPR003494 SHS2 domain inserted in FtsA BRM88_20385 IPR020823 Cell division protein FtsA BRM88_20390 IPR005548 Cell division protein FtsQ/DivIB BRM88_20390 IPR013685 Polypeptide-transport-associated, FtsQ-type BRM88_20390 IPR026579 Cell division protein FtsQ BRM88_20395 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site BRM88_20395 IPR005905 D-alanine--D-alanine ligase BRM88_20395 IPR011095 D-alanine--D-alanine ligase, C-terminal BRM88_20395 IPR011127 D-alanine--D-alanine ligase, N-terminal domain BRM88_20395 IPR013815 ATP-grasp fold, subdomain 1 BRM88_20395 IPR016185 Pre-ATP-grasp domain BRM88_20400 IPR000713 Mur ligase, N-terminal BRM88_20400 IPR004101 Mur ligase, C-terminal BRM88_20400 IPR005758 UDP-N-acetylmuramate-alanine ligase BRM88_20400 IPR013221 Mur ligase, central BRM88_20400 IPR036565 BRM88_20400 BRM88_20400 IPR036615 BRM88_20400 BRM88_20405 IPR004276 Glycosyl transferase, family 28 BRM88_20405 IPR006009 N-acetylglucosaminyltransferase, MurG BRM88_20405 IPR007235 Glycosyl transferase, family 28, C-terminal BRM88_20410 IPR001182 Cell cycle protein FtsW/RodA BRM88_20410 IPR013437 Cell division protein FtsW BRM88_20415 IPR000715 Glycosyl transferase, family 4 BRM88_20415 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase BRM88_20415 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site BRM88_20420 IPR000713 Mur ligase, N-terminal BRM88_20420 IPR004101 Mur ligase, C-terminal BRM88_20420 IPR005863 UDP-MurNAc-pentapeptide synthetase BRM88_20420 IPR013221 Mur ligase, central BRM88_20420 IPR035911 BRM88_20420 BRM88_20420 IPR036565 BRM88_20420 BRM88_20420 IPR036615 BRM88_20420 BRM88_20425 IPR000713 Mur ligase, N-terminal BRM88_20425 IPR004101 Mur ligase, C-terminal BRM88_20425 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase BRM88_20425 IPR013221 Mur ligase, central BRM88_20425 IPR035911 BRM88_20425 BRM88_20425 IPR036565 BRM88_20425 BRM88_20425 IPR036615 BRM88_20425 BRM88_20430 IPR001460 Penicillin-binding protein, transpeptidase BRM88_20430 IPR005311 Penicillin-binding protein, dimerisation domain BRM88_20430 IPR012338 Beta-lactamase/transpeptidase-like BRM88_20430 IPR036138 BRM88_20430 BRM88_20430 IPR037532 BRM88_20430 BRM88_20435 IPR011922 Cell division protein FtsL BRM88_20440 IPR002903 Ribosomal RNA small subunit methyltransferase H BRM88_20440 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain BRM88_20440 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_20445 IPR003444 MraZ BRM88_20445 IPR020603 MraZ domain BRM88_20445 IPR037914 BRM88_20445 BRM88_20445 IPR038619 BRM88_20445 BRM88_20450 IPR008551 Protein of unknown function DUF833 BRM88_20465 IPR000878 Tetrapyrrole methylase BRM88_20465 IPR008189 rRNA small subunit methyltransferase I BRM88_20465 IPR014776 Tetrapyrrole methylase, subdomain 2 BRM88_20465 IPR014777 Tetrapyrrole methylase, subdomain 1 BRM88_20465 IPR018063 SAM-dependent methyltransferase RsmI, conserved site BRM88_20465 IPR035996 BRM88_20465 BRM88_20470 IPR007443 Penicillin-binding protein activator LpoA BRM88_20470 IPR028082 Periplasmic binding protein-like I BRM88_20475 IPR003509 Uncharacterised protein family UPF0102 BRM88_20475 IPR011335 Restriction endonuclease type II-like BRM88_20475 IPR011856 tRNA endonuclease-like domain BRM88_20480 IPR007404 Protein of unknown function DUF457 BRM88_20485 IPR004113 FAD-linked oxidase, C-terminal BRM88_20485 IPR006094 FAD linked oxidase, N-terminal BRM88_20485 IPR016164 FAD-linked oxidase-like, C-terminal BRM88_20485 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 BRM88_20485 IPR036318 BRM88_20485 BRM88_20490 IPR001789 Signal transduction response regulator, receiver domain BRM88_20490 IPR001867 Signal transduction response regulator, C-terminal BRM88_20490 IPR011006 CheY-like superfamily BRM88_20490 IPR036388 BRM88_20490 BRM88_20495 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_20495 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_20495 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal BRM88_20495 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_20495 IPR006016 UspA BRM88_20495 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_20495 IPR025201 Sensor protein KdpD, transmembrane domain BRM88_20495 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_20495 IPR029016 GAF domain-like BRM88_20495 IPR036097 BRM88_20495 BRM88_20495 IPR036890 BRM88_20495 BRM88_20495 IPR038318 BRM88_20495 BRM88_20500 IPR003820 Potassium-transporting ATPase C chain BRM88_20505 IPR001757 Cation-transporting P-type ATPase BRM88_20505 IPR006391 Potassium-transporting P-type ATPase, B chain, subfamily IA BRM88_20505 IPR008250 P-type ATPase, A domain BRM88_20505 IPR018303 P-type ATPase, phosphorylation site BRM88_20505 IPR023298 P-type ATPase, transmembrane domain BRM88_20505 IPR023299 P-type ATPase, cytoplasmic domain N BRM88_20505 IPR036412 BRM88_20505 BRM88_20510 IPR004623 Potassium-transporting ATPase A chain BRM88_20515 IPR011726 K+ transporting P-type ATPase, F subunit BRM88_20535 IPR006283 Thiamine-monophosphate kinase BRM88_20535 IPR010918 AIR synthase-related protein, C-terminal domain BRM88_20535 IPR016188 PurM, N-terminal-like BRM88_20535 IPR036676 BRM88_20535 BRM88_20535 IPR036921 BRM88_20535 BRM88_20540 IPR006027 NusB/RsmB/TIM44 BRM88_20540 IPR011605 NusB antitermination factor BRM88_20540 IPR035926 BRM88_20540 BRM88_20545 IPR002180 6,7-dimethyl-8-ribityllumazine synthase BRM88_20545 IPR034964 BRM88_20545 BRM88_20545 IPR036467 BRM88_20545 BRM88_20550 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB BRM88_20550 IPR017945 DHBP synthase RibB-like alpha/beta domain BRM88_20550 IPR032677 BRM88_20550 BRM88_20550 IPR036144 BRM88_20550 BRM88_20555 IPR001783 Lumazine-binding protein BRM88_20555 IPR017938 Riboflavin synthase-like beta-barrel BRM88_20555 IPR023366 ATP synthase subunit alpha-like domain BRM88_20555 IPR026017 Lumazine-binding domain BRM88_20565 IPR002125 CMP/dCMP deaminase, zinc-binding BRM88_20565 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal BRM88_20565 IPR004794 Riboflavin biosynthesis protein RibD BRM88_20565 IPR011549 Riboflavin-specific deaminase, C-terminal BRM88_20565 IPR016192 APOBEC/CMP deaminase, zinc-binding BRM88_20565 IPR016193 Cytidine deaminase-like BRM88_20565 IPR024072 Dihydrofolate reductase-like domain BRM88_20570 IPR000182 GNAT domain BRM88_20570 IPR016181 Acyl-CoA N-acyltransferase BRM88_20575 IPR003796 Ribonucleotide reductase regulator NrdR-like BRM88_20575 IPR005144 ATP-cone BRM88_20585 IPR001085 Serine hydroxymethyltransferase BRM88_20585 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BRM88_20585 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BRM88_20585 IPR015424 Pyridoxal phosphate-dependent transferase BRM88_20585 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site BRM88_20585 IPR039429 BRM88_20585 BRM88_20590 IPR000531 TonB-dependent receptor, beta-barrel BRM88_20590 IPR012910 TonB-dependent receptor, plug BRM88_20590 IPR036942 BRM88_20590 BRM88_20590 IPR037066 BRM88_20590 BRM88_20600 IPR024572 Protein of unknown function DUF3315 BRM88_20605 IPR003439 ABC transporter-like BRM88_20605 IPR003593 AAA+ ATPase domain BRM88_20605 IPR017871 ABC transporter, conserved site BRM88_20605 IPR022374 ABC transporter, ATP-binding protein, ChvD BRM88_20605 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_20605 IPR032781 BRM88_20605 BRM88_20615 IPR025495 Protein of unknown function DUF4386 BRM88_20620 IPR025495 Protein of unknown function DUF4386 BRM88_20625 IPR000801 Putative esterase BRM88_20625 IPR014186 S-formylglutathione hydrolase BRM88_20625 IPR029058 Alpha/Beta hydrolase fold BRM88_20635 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site BRM88_20635 IPR011032 GroES (chaperonin 10)-like BRM88_20635 IPR013149 Alcohol dehydrogenase, C-terminal BRM88_20635 IPR013154 Alcohol dehydrogenase GroES-like BRM88_20635 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase BRM88_20635 IPR020843 Polyketide synthase, enoylreductase BRM88_20635 IPR036291 BRM88_20635 BRM88_20640 IPR003735 Metal-sensitive transcriptional repressor BRM88_20640 IPR038390 BRM88_20640 BRM88_20645 IPR001296 Glycosyl transferase, family 1 BRM88_20650 IPR001789 Signal transduction response regulator, receiver domain BRM88_20650 IPR001867 Signal transduction response regulator, C-terminal BRM88_20650 IPR011006 CheY-like superfamily BRM88_20650 IPR016032 Signal transduction response regulator, C-terminal effector BRM88_20650 IPR036388 BRM88_20650 BRM88_20655 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_20655 IPR003660 HAMP linker domain BRM88_20655 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_20655 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_20655 IPR036097 BRM88_20655 BRM88_20655 IPR036890 BRM88_20655 BRM88_20685 IPR006336 Glutamate--cysteine ligase, GCS2 BRM88_20685 IPR012337 Ribonuclease H-like domain BRM88_20685 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain BRM88_20685 IPR038721 BRM88_20685 BRM88_20695 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_20695 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_20695 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_20695 IPR036097 BRM88_20695 BRM88_20695 IPR036890 BRM88_20695 BRM88_20700 IPR006336 Glutamate--cysteine ligase, GCS2 BRM88_20700 IPR011556 Glutamate--cysteine ligase, plant BRM88_20700 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain BRM88_20700 IPR035434 BRM88_20700 BRM88_20705 IPR008217 Domain of unknown function DUF125, transmembrane BRM88_20715 IPR006073 GTP binding domain BRM88_20715 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC BRM88_20715 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_20720 IPR009056 Cytochrome c-like domain BRM88_20720 IPR024167 Cytochrome c4 BRM88_20720 IPR036909 BRM88_20720 BRM88_20725 IPR012336 Thioredoxin-like fold BRM88_20725 IPR017937 Thioredoxin, conserved site BRM88_20725 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL BRM88_20725 IPR036249 BRM88_20725 BRM88_20730 IPR001853 DSBA-like thioredoxin domain BRM88_20730 IPR036249 BRM88_20730 BRM88_20735 IPR005135 Endonuclease/exonuclease/phosphatase BRM88_20735 IPR036691 BRM88_20735 BRM88_20750 IPR002559 Transposase, IS4-like BRM88_20750 IPR008490 Transposase InsH, N-terminal BRM88_20755 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme BRM88_20755 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site BRM88_20755 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BRM88_20755 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BRM88_20755 IPR015424 Pyridoxal phosphate-dependent transferase BRM88_20755 IPR036052 BRM88_20755 BRM88_20770 IPR002559 Transposase, IS4-like BRM88_20770 IPR008490 Transposase InsH, N-terminal BRM88_20780 IPR002559 Transposase, IS4-like BRM88_20780 IPR008490 Transposase InsH, N-terminal BRM88_20790 IPR002514 Transposase IS3/IS911family BRM88_20790 IPR009057 Homeodomain-like BRM88_20820 IPR002646 Poly A polymerase, head domain BRM88_20820 IPR006674 HD domain BRM88_20820 IPR012006 tRNA nucleotidyltransferase, proteobacteria BRM88_20820 IPR032828 BRM88_20820 BRM88_20825 IPR024442 Transposase, zinc-ribbon BRM88_20825 IPR024445 Transposase, ISXO2-like BRM88_20830 IPR012337 Ribonuclease H-like domain BRM88_20830 IPR025246 Transposase IS30-like HTH domain BRM88_20835 IPR002559 Transposase, IS4-like BRM88_20835 IPR008490 Transposase InsH, N-terminal BRM88_20865 IPR024442 Transposase, zinc-ribbon BRM88_20865 IPR024445 Transposase, ISXO2-like BRM88_20880 IPR011990 Tetratricopeptide-like helical domain BRM88_20880 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA BRM88_20885 IPR002509 Polysaccharide deacetylase BRM88_20885 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BRM88_20885 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB BRM88_20885 IPR032772 BRM88_20885 BRM88_20890 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA BRM88_20890 IPR029044 Nucleotide-diphospho-sugar transferases BRM88_20895 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD BRM88_20900 IPR003764 N-acetylglucosamine-6-phosphate deacetylase BRM88_20900 IPR006680 Amidohydrolase 1 BRM88_20900 IPR011059 Metal-dependent hydrolase, composite domain BRM88_20900 IPR032466 BRM88_20900 BRM88_20905 IPR001347 Sugar isomerase (SIS) BRM88_20910 IPR000843 Transcription regulator HTH, LacI BRM88_20910 IPR010982 Lambda repressor-like, DNA-binding domain BRM88_20910 IPR028082 Periplasmic binding protein-like I BRM88_20915 IPR005964 Bacterial glucose/galactose transporter BRM88_20915 IPR011701 Major facilitator superfamily BRM88_20915 IPR036259 BRM88_20915 BRM88_20920 IPR000524 Transcription regulator HTH, GntR BRM88_20920 IPR011663 UbiC transcription regulator-associated BRM88_20920 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain BRM88_20920 IPR036388 BRM88_20920 BRM88_20920 IPR036390 BRM88_20920 BRM88_20925 IPR012429 Protein of unknown function DUF1624 BRM88_20935 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich BRM88_20935 IPR006103 Glycoside hydrolase, family 2, TIM barrel BRM88_20935 IPR006104 Glycosyl hydrolases family 2, sugar binding domain BRM88_20935 IPR008979 Galactose-binding domain-like BRM88_20935 IPR013783 Immunoglobulin-like fold BRM88_20935 IPR017853 Glycoside hydrolase, superfamily BRM88_20935 IPR023232 Glycoside hydrolase, family 2, active site BRM88_20935 IPR032311 BRM88_20935 BRM88_20935 IPR036156 BRM88_20935 BRM88_20940 IPR000531 TonB-dependent receptor, beta-barrel BRM88_20940 IPR010104 Bacterial TonB-dependent receptor BRM88_20940 IPR012910 TonB-dependent receptor, plug BRM88_20940 IPR036942 BRM88_20940 BRM88_20940 IPR037066 BRM88_20940 BRM88_20945 IPR012337 Ribonuclease H-like domain BRM88_20945 IPR025246 Transposase IS30-like HTH domain BRM88_20960 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 BRM88_20960 IPR032877 BRM88_20960 BRM88_20980 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA BRM88_20980 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_20980 IPR038375 BRM88_20980 BRM88_20985 IPR002347 Glucose/ribitol dehydrogenase BRM88_20985 IPR020904 Short-chain dehydrogenase/reductase, conserved site BRM88_20985 IPR036291 BRM88_20985 BRM88_20990 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK BRM88_20990 IPR035907 BRM88_20990 BRM88_20995 IPR001789 Signal transduction response regulator, receiver domain BRM88_20995 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_20995 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_20995 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_20995 IPR011006 CheY-like superfamily BRM88_20995 IPR036097 BRM88_20995 BRM88_20995 IPR036890 BRM88_20995 BRM88_21000 IPR001789 Signal transduction response regulator, receiver domain BRM88_21000 IPR011006 CheY-like superfamily BRM88_21005 IPR000014 PAS domain BRM88_21005 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_21005 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_21005 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_21005 IPR007891 CHASE3 BRM88_21005 IPR035965 BRM88_21005 BRM88_21005 IPR036097 BRM88_21005 BRM88_21005 IPR036890 BRM88_21005 BRM88_21010 IPR007055 BON domain BRM88_21010 IPR014004 Transport-associated and nodulation domain, bacteria BRM88_21015 IPR000683 Oxidoreductase, N-terminal BRM88_21015 IPR004104 Oxidoreductase, C-terminal BRM88_21015 IPR036291 BRM88_21015 BRM88_21020 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site BRM88_21020 IPR004849 6-phosphogluconate dehydrogenase-related protein BRM88_21020 IPR006114 6-phosphogluconate dehydrogenase, C-terminal BRM88_21020 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding BRM88_21020 IPR006183 BRM88_21020 BRM88_21020 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like BRM88_21020 IPR013328 Dehydrogenase, multihelical BRM88_21020 IPR036291 BRM88_21020 BRM88_21030 IPR008816 Glycine zipper 2TM domain BRM88_21035 IPR018718 Protein of unknown function DUF2242 BRM88_21050 IPR007229 Nicotinate phosphoribosyltransferase family BRM88_21050 IPR013785 Aldolase-type TIM barrel BRM88_21050 IPR016471 Nicotinamide phosphoribosyl transferase BRM88_21050 IPR036068 BRM88_21050 BRM88_21055 IPR000086 NUDIX hydrolase domain BRM88_21055 IPR004821 Cytidyltransferase-like domain BRM88_21055 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_21055 IPR015797 NUDIX hydrolase domain-like BRM88_21055 IPR020084 NUDIX hydrolase, conserved site BRM88_21060 IPR005135 Endonuclease/exonuclease/phosphatase BRM88_21060 IPR036691 BRM88_21060 BRM88_21065 IPR001478 PDZ domain BRM88_21065 IPR004447 C-terminal-processing peptidase S41A BRM88_21065 IPR005151 Tail specific protease BRM88_21065 IPR020992 Tail specific protease, C-terminal BRM88_21065 IPR029045 ClpP/crotonase-like domain BRM88_21065 IPR036034 BRM88_21065 BRM88_21070 IPR009528 Restriction endonuclease, type II, BsuBI/PstI, C-terminal BRM88_21075 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BRM88_21075 IPR011639 Restriction modification methylase Eco57I BRM88_21075 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_21080 IPR003698 Lipoyl synthase BRM88_21080 IPR006638 Elongator protein 3/MiaB/NifB BRM88_21080 IPR007197 Radical SAM BRM88_21080 IPR013785 Aldolase-type TIM barrel BRM88_21080 IPR031691 BRM88_21080 BRM88_21085 IPR000544 Octanoyltransferase BRM88_21085 IPR004143 Biotin/lipoate A/B protein ligase BRM88_21085 IPR020605 Octanoyltransferase, conserved site BRM88_21090 IPR007454 Uncharacterised protein family UPF0250 BRM88_21090 IPR027471 YbeD-like domain BRM88_21105 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal BRM88_21105 IPR012338 Beta-lactamase/transpeptidase-like BRM88_21105 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal BRM88_21105 IPR015956 Penicillin-binding protein-associated BRM88_21105 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A BRM88_21105 IPR037167 BRM88_21105 BRM88_21115 IPR007730 Sporulation-related domain BRM88_21115 IPR009009 RlpA-like double-psi beta-barrel domain BRM88_21115 IPR012997 Rare lipoprotein A, bacterial BRM88_21115 IPR034718 BRM88_21115 BRM88_21115 IPR036680 BRM88_21115 BRM88_21115 IPR036908 BRM88_21115 BRM88_21120 IPR011757 Lytic transglycosylase MltB BRM88_21120 IPR023346 Lysozyme-like domain BRM88_21120 IPR031304 BRM88_21120 BRM88_21135 IPR018392 LysM domain BRM88_21135 IPR024408 Domain of unknown function DUF3380 BRM88_21135 IPR036779 BRM88_21135 BRM88_21145 IPR024442 Transposase, zinc-ribbon BRM88_21145 IPR024445 Transposase, ISXO2-like BRM88_21155 IPR028950 Immunity protein 43 BRM88_21155 IPR028966 Immunity protein 44 BRM88_21165 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal BRM88_21180 IPR001182 Cell cycle protein FtsW/RodA BRM88_21180 IPR011923 Rod shape-determining protein RodA BRM88_21180 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site BRM88_21185 IPR001460 Penicillin-binding protein, transpeptidase BRM88_21185 IPR005311 Penicillin-binding protein, dimerisation domain BRM88_21185 IPR012338 Beta-lactamase/transpeptidase-like BRM88_21185 IPR017790 Penicillin-binding protein 2 BRM88_21185 IPR036138 BRM88_21185 BRM88_21190 IPR007227 Cell shape-determining protein MreD BRM88_21190 IPR026034 Cell shape-determining protein MreD, proteobacterial type BRM88_21195 IPR007221 Rod shape-determining protein MreC BRM88_21200 IPR004000 Actin-related protein BRM88_21200 IPR004753 Cell shape determining protein MreB/Mrl BRM88_21205 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BRM88_21205 IPR011611 Carbohydrate kinase PfkB BRM88_21205 IPR029056 Ribokinase-like BRM88_21220 IPR002125 CMP/dCMP deaminase, zinc-binding BRM88_21220 IPR016193 Cytidine deaminase-like BRM88_21225 IPR000182 GNAT domain BRM88_21225 IPR016181 Acyl-CoA N-acyltransferase BRM88_21235 IPR032317 BRM88_21235 BRM88_21245 IPR004033 UbiE/COQ5 methyltransferase BRM88_21245 IPR023576 UbiE/COQ5 methyltransferase, conserved site BRM88_21245 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_21250 IPR000160 GGDEF domain BRM88_21250 IPR029787 Nucleotide cyclase BRM88_21255 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal BRM88_21255 IPR015211 Peptidase M1, leukotriene A4 hydrolase, aminopeptidase C-terminal BRM88_21255 IPR016024 Armadillo-type fold BRM88_21255 IPR027268 BRM88_21255 BRM88_21255 IPR038502 BRM88_21255 BRM88_21265 IPR006439 HAD hydrolase, subfamily IA BRM88_21265 IPR023214 HAD-like domain BRM88_21265 IPR036412 BRM88_21265 BRM88_21270 IPR003593 AAA+ ATPase domain BRM88_21270 IPR003959 ATPase, AAA-type, core BRM88_21270 IPR004491 Heat shock protein HslU BRM88_21270 IPR019489 Clp ATPase, C-terminal BRM88_21270 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_21275 IPR001353 Proteasome, subunit alpha/beta BRM88_21275 IPR022281 ATP-dependent protease, HslV subunit BRM88_21275 IPR029055 Nucleophile aminohydrolases, N-terminal BRM88_21285 IPR002104 Integrase, catalytic BRM88_21285 IPR004107 Integrase, SAM-like, N-terminal BRM88_21285 IPR010998 Integrase, Lambda-type, N-terminal BRM88_21285 IPR011010 DNA breaking-rejoining enzyme, catalytic core BRM88_21285 IPR011931 Tyrosine recombinase XerC BRM88_21285 IPR013762 Integrase-like, catalytic core BRM88_21285 IPR023009 Tyrosine recombinase XerC/XerD BRM88_21290 IPR007435 Protein of unknown function DUF484 BRM88_21290 IPR029016 GAF domain-like BRM88_21295 IPR001653 Diaminopimelate epimerase, DapF BRM88_21295 IPR018510 Diaminopimelate epimerase, active site BRM88_21300 IPR032831 BRM88_21300 BRM88_21305 IPR007401 Protein of unknown function DUF454 BRM88_21310 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BRM88_21310 IPR002470 Peptidase S9A, prolyl oligopeptidase BRM88_21310 IPR023302 Peptidase S9A, N-terminal domain BRM88_21310 IPR029058 Alpha/Beta hydrolase fold BRM88_21315 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site BRM88_21315 IPR004839 Aminotransferase, class I/classII BRM88_21315 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BRM88_21315 IPR015424 Pyridoxal phosphate-dependent transferase BRM88_21330 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BRM88_21330 IPR002470 Peptidase S9A, prolyl oligopeptidase BRM88_21330 IPR023302 Peptidase S9A, N-terminal domain BRM88_21330 IPR029058 Alpha/Beta hydrolase fold BRM88_21340 IPR000566 Lipocalin/cytosolic fatty-acid binding domain BRM88_21340 IPR012674 Calycin BRM88_21340 IPR022271 Lipocalin, ApoD type BRM88_21340 IPR022272 Lipocalin family conserved site BRM88_21345 IPR013196 Helix-turn-helix, type 11 BRM88_21345 IPR026881 WYL domain BRM88_21345 IPR036388 BRM88_21345 BRM88_21345 IPR036390 BRM88_21345 BRM88_21350 IPR007433 Protein of unknown function DUF481 BRM88_21355 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase BRM88_21355 IPR022417 Porphobilinogen deaminase, N-terminal BRM88_21355 IPR022418 Porphobilinogen deaminase, C-terminal BRM88_21355 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site BRM88_21355 IPR036803 BRM88_21355 BRM88_21360 IPR001789 Signal transduction response regulator, receiver domain BRM88_21360 IPR007492 LytTR DNA-binding domain BRM88_21360 IPR011006 CheY-like superfamily BRM88_21365 IPR010559 Signal transduction histidine kinase, internal region BRM88_21365 IPR036890 BRM88_21365 BRM88_21370 IPR003140 Phospholipase/carboxylesterase/thioesterase BRM88_21370 IPR029058 Alpha/Beta hydrolase fold BRM88_21375 IPR001173 Glycosyltransferase 2-like BRM88_21375 IPR023725 Glucan biosynthesis glucosyltransferase H BRM88_21375 IPR029044 Nucleotide-diphospho-sugar transferases BRM88_21400 IPR003137 Protease-associated domain, PA BRM88_21400 IPR007484 Peptidase M28 BRM88_21410 IPR002645 STAS domain BRM88_21410 IPR011547 Sulphate transporter BRM88_21410 IPR036513 BRM88_21410 BRM88_21415 IPR001547 Glycoside hydrolase, family 5 BRM88_21415 IPR001919 Cellulose-binding domain, family II, bacterial-type BRM88_21415 IPR008965 Carbohydrate-binding domain BRM88_21415 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain BRM88_21415 IPR017853 Glycoside hydrolase, superfamily BRM88_21415 IPR018087 Glycoside hydrolase, family 5, conserved site BRM88_21430 IPR000014 PAS domain BRM88_21430 IPR000160 GGDEF domain BRM88_21430 IPR001610 PAC motif BRM88_21430 IPR003018 GAF domain BRM88_21430 IPR013655 PAS fold-3 BRM88_21430 IPR013656 PAS fold-4 BRM88_21430 IPR029016 GAF domain-like BRM88_21430 IPR029787 Nucleotide cyclase BRM88_21430 IPR035965 BRM88_21430 BRM88_21435 IPR007863 Peptidase M16, C-terminal domain BRM88_21435 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like BRM88_21435 IPR011765 Peptidase M16, N-terminal BRM88_21440 IPR003018 GAF domain BRM88_21440 IPR029016 GAF domain-like BRM88_21460 IPR002763 Protein of unknown function DUF72 BRM88_21460 IPR036520 BRM88_21460 BRM88_21470 IPR001661 Glycoside hydrolase, family 37 BRM88_21470 IPR008928 Six-hairpin glycosidase-like BRM88_21470 IPR012341 Six-hairpin glycosidase BRM88_21470 IPR018232 Glycoside hydrolase, family 37, conserved site BRM88_21470 IPR023720 Trehalase, periplasmic BRM88_21475 IPR005468 Avidin/streptavidin BRM88_21475 IPR005469 Avidin BRM88_21475 IPR036896 BRM88_21475 BRM88_21490 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB BRM88_21500 IPR002293 Amino acid/polyamine transporter I BRM88_21500 IPR004840 Amino acid permease, conserved site BRM88_21500 IPR004841 Amino acid permease/ SLC12A domain BRM88_21510 IPR003961 Fibronectin, type III BRM88_21510 IPR013783 Immunoglobulin-like fold BRM88_21510 IPR016288 1, 4-beta cellobiohydrolase BRM88_21510 IPR036116 BRM88_21510 BRM88_21510 IPR036434 BRM88_21510 BRM88_21515 IPR001547 Glycoside hydrolase, family 5 BRM88_21515 IPR017853 Glycoside hydrolase, superfamily BRM88_21515 IPR036749 BRM88_21515 BRM88_21515 IPR036908 BRM88_21515 BRM88_21520 IPR000620 Drug/metabolite transporter BRM88_21525 IPR008471 MnmC-like methyltransferase BRM88_21525 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_21540 IPR011673 Protein of unknown function DUF1615 BRM88_21550 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BRM88_21550 IPR002469 Peptidase S9B, dipeptidylpeptidase IV N-terminal BRM88_21550 IPR029058 Alpha/Beta hydrolase fold BRM88_21550 IPR038554 BRM88_21550 BRM88_21560 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BRM88_21560 IPR029058 Alpha/Beta hydrolase fold BRM88_21580 IPR002347 Glucose/ribitol dehydrogenase BRM88_21580 IPR036291 BRM88_21580 BRM88_21595 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase BRM88_21595 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BRM88_21595 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BRM88_21595 IPR015424 Pyridoxal phosphate-dependent transferase BRM88_21600 IPR005256 Anthranilate synthase component I, PabB-like BRM88_21600 IPR005801 ADC synthase BRM88_21600 IPR006805 Anthranilate synthase component I, N-terminal BRM88_21600 IPR015890 Chorismate binding, C-terminal BRM88_21600 IPR019999 Anthranilate synthase component I - like BRM88_21605 IPR001206 Diacylglycerol kinase, catalytic domain BRM88_21605 IPR005218 Diacylglycerol/lipid kinase BRM88_21605 IPR016064 ATP-NAD kinase-like domain BRM88_21605 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 BRM88_21605 IPR022433 Lipid kinase YegS BRM88_21610 IPR000182 GNAT domain BRM88_21610 IPR016181 Acyl-CoA N-acyltransferase BRM88_21615 IPR000056 Ribulose-phosphate 3-epimerase-like BRM88_21615 IPR011060 Ribulose-phosphate binding barrel BRM88_21615 IPR013785 Aldolase-type TIM barrel BRM88_21615 IPR026019 Ribulose-phosphate 3-epimerase BRM88_21620 IPR001623 DnaJ domain BRM88_21620 IPR036869 BRM88_21620 BRM88_21625 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase BRM88_21625 IPR018236 SAICAR synthetase, conserved site BRM88_21625 IPR028923 SAICAR synthetase/ADE2, N-terminal BRM88_21645 IPR009057 Homeodomain-like BRM88_21645 IPR025959 Winged helix-turn helix domain BRM88_21645 IPR038717 BRM88_21645 BRM88_21665 IPR009305 Protein of unknown function DUF962 BRM88_21675 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal BRM88_21675 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase BRM88_21675 IPR007182 Na+/H+ antiporter MnhB subunit-related protein BRM88_21675 IPR025383 Domain of unknown function DUF4040 BRM88_21680 IPR039428 BRM88_21680 BRM88_21685 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase BRM88_21685 IPR003918 NADH:ubiquinone oxidoreductase BRM88_21690 IPR002758 Na+/H+ antiporter subunit E BRM88_21695 IPR007208 Na(+)/H(+) antiporter subunit F-like BRM88_21700 IPR005133 Na+/H+ antiporter subunit G BRM88_21710 IPR005708 Homogentisate 1,2-dioxygenase BRM88_21710 IPR011051 RmlC-like cupin domain BRM88_21710 IPR014710 RmlC-like jelly roll fold BRM88_21710 IPR022950 Homogentisate 1,2-dioxygenase, bacterial BRM88_21715 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BRM88_21715 IPR005956 4-hydroxyphenylpyruvate dioxygenase BRM88_21715 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BRM88_21720 IPR000835 MarR-type HTH domain BRM88_21720 IPR023187 Transcriptional regulator MarR-type, conserved site BRM88_21720 IPR036388 BRM88_21720 BRM88_21720 IPR036390 BRM88_21720 BRM88_21725 IPR036249 BRM88_21725 BRM88_21730 IPR000109 Proton-dependent oligopeptide transporter family BRM88_21730 IPR005279 Amino acid/peptide transporter family BRM88_21730 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site BRM88_21730 IPR036259 BRM88_21730 BRM88_21735 IPR004981 Tryptophan 2,3-dioxygenase BRM88_21735 IPR037217 BRM88_21735 BRM88_21745 IPR001017 Dehydrogenase, E1 component BRM88_21745 IPR029061 Thiamin diphosphate-binding fold BRM88_21755 IPR024442 Transposase, zinc-ribbon BRM88_21755 IPR024445 Transposase, ISXO2-like BRM88_21765 IPR001452 SH3 domain BRM88_21765 IPR014593 Uncharacterised conserved protein UCP034961, SH3-2 BRM88_21765 IPR036028 BRM88_21765 BRM88_21780 IPR002155 Thiolase BRM88_21780 IPR016039 Thiolase-like BRM88_21780 IPR020616 Thiolase, N-terminal BRM88_21780 IPR020617 Thiolase, C-terminal BRM88_21790 IPR005254 Heme biosynthesis-associated TPR protein BRM88_21790 IPR010817 HemY, N-terminal BRM88_21790 IPR011990 Tetratricopeptide-like helical domain BRM88_21795 IPR007470 HemX BRM88_21800 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase BRM88_21800 IPR036108 BRM88_21800 BRM88_21805 IPR002654 Glycosyl transferase, family 25 BRM88_21825 IPR012337 Ribonuclease H-like domain BRM88_21825 IPR038721 BRM88_21825 BRM88_21835 IPR002559 Transposase, IS4-like BRM88_21835 IPR008490 Transposase InsH, N-terminal BRM88_21840 IPR023198 Phosphoglycolate phosphatase, domain 2 BRM88_21840 IPR023214 HAD-like domain BRM88_21840 IPR036412 BRM88_21840 BRM88_21845 IPR002048 EF-hand domain BRM88_21845 IPR011992 EF-hand domain pair BRM88_21845 IPR018247 EF-Hand 1, calcium-binding site BRM88_21850 IPR002048 EF-hand domain BRM88_21850 IPR011992 EF-hand domain pair BRM88_21850 IPR018247 EF-Hand 1, calcium-binding site BRM88_21860 IPR017143 Uncharacterised conserved protein UCP037225 BRM88_21860 IPR025990 Cysteine-rich CPXCG protein BRM88_21865 IPR000755 Peptidase M15D, VanX D-ala-D-ala dipeptidase BRM88_21865 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain BRM88_21870 IPR002502 N-acetylmuramoyl-L-alanine amidase domain BRM88_21870 IPR036505 BRM88_21870 BRM88_21875 IPR000064 Endopeptidase, NLPC/P60 domain BRM88_21875 IPR026864 SH3b2-type SH3 domain BRM88_21875 IPR027017 Uncharacterised peptidase with NlpC/P60 domain, YkfC type BRM88_21875 IPR038765 BRM88_21875 BRM88_21875 IPR039439 BRM88_21875 BRM88_21880 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain BRM88_21880 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BRM88_21880 IPR029017 Enolase N-terminal domain-like BRM88_21880 IPR029065 Enolase C-terminal domain-like BRM88_21880 IPR036849 BRM88_21880 BRM88_21900 IPR024442 Transposase, zinc-ribbon BRM88_21900 IPR024445 Transposase, ISXO2-like BRM88_21920 IPR002293 Amino acid/polyamine transporter I BRM88_21930 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 BRM88_21930 IPR032877 BRM88_21930 BRM88_21935 IPR024442 Transposase, zinc-ribbon BRM88_21935 IPR024445 Transposase, ISXO2-like BRM88_21960 IPR008024 YiaAB two helix BRM88_21965 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase BRM88_21965 IPR011042 Six-bladed beta-propeller, TolB-like BRM88_21965 IPR012938 Glucose/Sorbosone dehydrogenase BRM88_21980 IPR024442 Transposase, zinc-ribbon BRM88_21980 IPR024445 Transposase, ISXO2-like BRM88_22000 IPR001764 Glycoside hydrolase, family 3, N-terminal BRM88_22000 IPR002772 Glycoside hydrolase family 3 C-terminal domain BRM88_22000 IPR013783 Immunoglobulin-like fold BRM88_22000 IPR017853 Glycoside hydrolase, superfamily BRM88_22000 IPR019800 Glycoside hydrolase, family 3, active site BRM88_22000 IPR026891 Fibronectin type III-like domain BRM88_22000 IPR036881 BRM88_22000 BRM88_22000 IPR036962 BRM88_22000 BRM88_22005 IPR006156 Dihydroneopterin aldolase BRM88_22005 IPR006157 Dihydroneopterin aldolase/epimerase domain BRM88_22010 IPR000905 Gcp-like domain BRM88_22010 IPR017860 Peptidase M22, conserved site BRM88_22010 IPR017861 Kae1/YgjD family BRM88_22010 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD BRM88_22015 IPR001911 Ribosomal protein S21 BRM88_22015 IPR018278 Ribosomal protein S21, conserved site BRM88_22015 IPR038380 BRM88_22015 BRM88_22020 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related BRM88_22020 IPR019004 Uncharacterised domain YOR215C, mitochondrial BRM88_22020 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal BRM88_22035 IPR017039 Virulence factor BrkB BRM88_22040 IPR002694 Zinc finger, CHC2-type BRM88_22040 IPR006171 Toprim domain BRM88_22040 IPR006295 DNA primase, DnaG BRM88_22040 IPR013173 DNA primase DnaG, DnaB-binding domain BRM88_22040 IPR013264 DNA primase, catalytic core, N-terminal BRM88_22040 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BRM88_22040 IPR019475 DNA primase, DnaB-helicase binding domain BRM88_22040 IPR030846 BRM88_22040 BRM88_22040 IPR036977 BRM88_22040 BRM88_22040 IPR037068 BRM88_22040 BRM88_22050 IPR029058 Alpha/Beta hydrolase fold BRM88_22055 IPR029058 Alpha/Beta hydrolase fold BRM88_22060 IPR016833 Putative sodium bile acid cotransporter BRM88_22060 IPR038770 BRM88_22060 BRM88_22065 IPR036249 BRM88_22065 BRM88_22075 IPR000537 UbiA prenyltransferase family BRM88_22075 IPR006369 Protohaem IX farnesyltransferase BRM88_22075 IPR030470 BRM88_22075 BRM88_22080 IPR003780 COX15/CtaA family BRM88_22085 IPR036249 BRM88_22085 BRM88_22090 IPR002994 Surfeit locus 1/Shy1 BRM88_22095 IPR021313 Protein of unknown function DUF2909 BRM88_22100 IPR000298 Cytochrome c oxidase subunit III domain BRM88_22100 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle BRM88_22100 IPR035973 BRM88_22100 BRM88_22105 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 BRM88_22105 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain BRM88_22115 IPR000883 Cytochrome c oxidase subunit I BRM88_22115 IPR014241 Cytochrome c oxidase, subunit I bacterial type BRM88_22115 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site BRM88_22115 IPR036927 BRM88_22115 BRM88_22120 IPR001505 Copper centre Cu(A) BRM88_22120 IPR002429 Cytochrome c oxidase subunit II C-terminal BRM88_22120 IPR008972 Cupredoxin BRM88_22120 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain BRM88_22120 IPR014222 Cytochrome c oxidase, subunit II BRM88_22120 IPR036257 BRM88_22120 BRM88_22125 IPR019253 Protein of unknown function DUF2244, transmembrane BRM88_22130 IPR002872 Proline dehydrogenase domain BRM88_22130 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 BRM88_22130 IPR015590 Aldehyde dehydrogenase domain BRM88_22130 IPR016160 Aldehyde dehydrogenase, cysteine active site BRM88_22130 IPR016161 Aldehyde/histidinol dehydrogenase BRM88_22130 IPR016162 Aldehyde dehydrogenase, N-terminal BRM88_22130 IPR016163 Aldehyde dehydrogenase, C-terminal BRM88_22130 IPR024082 Proline dehydrogenase PutA, domain II BRM88_22130 IPR024089 Proline dehydrogenase PutA, domain I/II BRM88_22130 IPR025703 Bifunctional protein PutA BRM88_22130 IPR029041 FAD-linked oxidoreductase-like BRM88_22140 IPR024442 Transposase, zinc-ribbon BRM88_22140 IPR024445 Transposase, ISXO2-like BRM88_22145 IPR002024 Bacterioferritin BRM88_22145 IPR008331 Ferritin/DPS protein domain BRM88_22145 IPR009078 Ferritin-like superfamily BRM88_22145 IPR012347 Ferritin-related BRM88_22150 IPR007419 BFD-like [2Fe-2S]-binding domain BRM88_22155 IPR000086 NUDIX hydrolase domain BRM88_22155 IPR015797 NUDIX hydrolase domain-like BRM88_22155 IPR020084 NUDIX hydrolase, conserved site BRM88_22155 IPR022927 RNA pyrophosphohydrolase RppH BRM88_22170 IPR000754 Ribosomal protein S9 BRM88_22170 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BRM88_22170 IPR020568 Ribosomal protein S5 domain 2-type fold BRM88_22170 IPR020574 Ribosomal protein S9, conserved site BRM88_22170 IPR023035 Ribosomal protein S9, bacterial/plastid BRM88_22175 IPR005822 Ribosomal protein L13 BRM88_22175 IPR005823 Ribosomal protein L13, bacterial-type BRM88_22175 IPR023563 Ribosomal protein L13, conserved site BRM88_22175 IPR036899 BRM88_22175 BRM88_22180 IPR009078 Ferritin-like superfamily BRM88_22180 IPR011566 Ubiquinone biosynthesis protein Coq7 BRM88_22180 IPR012347 Ferritin-related BRM88_22185 IPR000390 Small multidrug resistance protein family BRM88_22190 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic BRM88_22190 IPR009165 S-adenosylmethionine decarboxylase, bacterial BRM88_22190 IPR016067 S-adenosylmethionine decarboxylase, core BRM88_22195 IPR000595 Cyclic nucleotide-binding domain BRM88_22195 IPR012318 Helix-turn-helix motif, Crp-type BRM88_22195 IPR014710 RmlC-like jelly roll fold BRM88_22195 IPR018335 Transcription regulator HTH, Crp-type, conserved site BRM88_22195 IPR018490 Cyclic nucleotide-binding-like BRM88_22195 IPR036388 BRM88_22195 BRM88_22195 IPR036390 BRM88_22195 BRM88_22200 IPR023214 HAD-like domain BRM88_22200 IPR036412 BRM88_22200 BRM88_22205 IPR001468 Indole-3-glycerol phosphate synthase, conserved site BRM88_22205 IPR011060 Ribulose-phosphate binding barrel BRM88_22205 IPR013785 Aldolase-type TIM barrel BRM88_22205 IPR013798 Indole-3-glycerol phosphate synthase BRM88_22210 IPR000312 Glycosyl transferase, family 3 BRM88_22210 IPR005940 Anthranilate phosphoribosyl transferase BRM88_22210 IPR017459 Glycosyl transferase family 3, N-terminal domain BRM88_22210 IPR035902 BRM88_22210 BRM88_22210 IPR036320 BRM88_22210 BRM88_22215 IPR002563 Flavin reductase-like, FMN-binding BRM88_22215 IPR012349 FMN-binding split barrel BRM88_22225 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain BRM88_22225 IPR017926 Glutamine amidotransferase BRM88_22225 IPR029062 Class I glutamine amidotransferase-like BRM88_22250 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric BRM88_22255 IPR011990 Tetratricopeptide-like helical domain BRM88_22260 IPR002559 Transposase, IS4-like BRM88_22260 IPR008490 Transposase InsH, N-terminal BRM88_22290 IPR002559 Transposase, IS4-like BRM88_22290 IPR008490 Transposase InsH, N-terminal BRM88_22300 IPR001584 Integrase, catalytic core BRM88_22300 IPR012337 Ribonuclease H-like domain BRM88_22300 IPR025246 Transposase IS30-like HTH domain BRM88_22305 IPR001207 Transposase, mutator type BRM88_22320 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 BRM88_22320 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal BRM88_22320 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF BRM88_22330 IPR002933 Peptidase M20 BRM88_22330 IPR011650 Peptidase M20, dimerisation domain BRM88_22330 IPR017439 Amidohydrolase BRM88_22330 IPR036264 BRM88_22330 BRM88_22335 IPR006143 RND efflux pump, membrane fusion protein BRM88_22335 IPR032317 BRM88_22335 BRM88_22340 IPR001036 Acriflavin resistance protein BRM88_22340 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BRM88_22345 IPR001036 Acriflavin resistance protein BRM88_22345 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BRM88_22355 IPR009770 Domain of unknown function DUF1338 BRM88_22370 IPR024442 Transposase, zinc-ribbon BRM88_22370 IPR024445 Transposase, ISXO2-like BRM88_22380 IPR024442 Transposase, zinc-ribbon BRM88_22380 IPR024445 Transposase, ISXO2-like BRM88_22385 IPR012660 Thioesterase, putative BRM88_22385 IPR029069 HotDog domain BRM88_22395 IPR001763 Rhodanese-like domain BRM88_22395 IPR036873 BRM88_22395 BRM88_22400 IPR003708 Bacterial protein export chaperone SecB BRM88_22400 IPR035958 BRM88_22400 BRM88_22405 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal BRM88_22405 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent BRM88_22405 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like BRM88_22405 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal BRM88_22405 IPR013328 Dehydrogenase, multihelical BRM88_22405 IPR036291 BRM88_22405 BRM88_22410 IPR023614 Porin domain BRM88_22410 IPR026364 Sulfation-dependent quorum factor, Ax21 family BRM88_22415 IPR000399 TPP-binding enzyme, conserved site BRM88_22415 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BRM88_22415 IPR012000 Thiamine pyrophosphate enzyme, central domain BRM88_22415 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BRM88_22415 IPR029035 DHS-like NAD/FAD-binding domain BRM88_22415 IPR029061 Thiamin diphosphate-binding fold BRM88_22420 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_22420 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_22420 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_22420 IPR036097 BRM88_22420 BRM88_22420 IPR036890 BRM88_22420 BRM88_22425 IPR001789 Signal transduction response regulator, receiver domain BRM88_22425 IPR002078 RNA polymerase sigma factor 54 interaction domain BRM88_22425 IPR002197 DNA binding HTH domain, Fis-type BRM88_22425 IPR003593 AAA+ ATPase domain BRM88_22425 IPR009057 Homeodomain-like BRM88_22425 IPR011006 CheY-like superfamily BRM88_22425 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BRM88_22425 IPR025944 Sigma-54 interaction domain, conserved site BRM88_22425 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_22440 IPR011701 Major facilitator superfamily BRM88_22440 IPR036259 BRM88_22440 BRM88_22445 IPR001537 tRNA/rRNA methyltransferase, SpoU type BRM88_22445 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase BRM88_22445 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BRM88_22445 IPR029028 Alpha/beta knot methyltransferases BRM88_22455 IPR025294 Protein of unknown function DUF4156 BRM88_22460 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal BRM88_22460 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BRM88_22460 IPR016039 Thiolase-like BRM88_22465 IPR003812 Fido domain BRM88_22465 IPR025758 Fic/DOC N-terminal BRM88_22465 IPR026287 Adenosine monophosphate-protein transferase BRM88_22465 IPR036388 BRM88_22465 BRM88_22465 IPR036390 BRM88_22465 BRM88_22465 IPR036597 BRM88_22465 BRM88_22470 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class BRM88_22470 IPR002941 DNA methylase N-4/N-6 BRM88_22470 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_22475 IPR006935 Helicase/UvrB domain BRM88_22475 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_22480 IPR000073 Alpha/beta hydrolase fold-1 BRM88_22480 IPR000639 Epoxide hydrolase-like BRM88_22480 IPR029058 Alpha/Beta hydrolase fold BRM88_22485 IPR005358 Putative zinc- or iron-chelating domain containing protein BRM88_22490 IPR000873 AMP-dependent synthetase/ligase BRM88_22490 IPR020845 AMP-binding, conserved site BRM88_22495 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase BRM88_22495 IPR036291 BRM88_22495 BRM88_22500 IPR009760 Protein of unknown function DUF1328 BRM88_22505 IPR002559 Transposase, IS4-like BRM88_22505 IPR008490 Transposase InsH, N-terminal BRM88_22510 IPR000835 MarR-type HTH domain BRM88_22510 IPR036388 BRM88_22510 BRM88_22510 IPR036390 BRM88_22510 BRM88_22520 IPR003607 HD/PDEase domain BRM88_22520 IPR006675 Uncharacterised domain HDIG BRM88_22520 IPR021812 Protein of unknown function DUF3391 BRM88_22525 IPR011701 Major facilitator superfamily BRM88_22525 IPR036259 BRM88_22525 BRM88_22545 IPR009057 Homeodomain-like BRM88_22545 IPR025959 Winged helix-turn helix domain BRM88_22545 IPR038717 BRM88_22545 BRM88_22550 IPR001451 Bacterial transferase hexapeptide repeat BRM88_22550 IPR011004 Trimeric LpxA-like BRM88_22560 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase BRM88_22560 IPR004404 Dihydroxy-acid dehydratase BRM88_22560 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site BRM88_22560 IPR037237 BRM88_22560 BRM88_22565 IPR002104 Integrase, catalytic BRM88_22565 IPR004107 Integrase, SAM-like, N-terminal BRM88_22565 IPR010998 Integrase, Lambda-type, N-terminal BRM88_22565 IPR011010 DNA breaking-rejoining enzyme, catalytic core BRM88_22565 IPR011946 Integrase, integron-type BRM88_22565 IPR013762 Integrase-like, catalytic core BRM88_22585 IPR002559 Transposase, IS4-like BRM88_22585 IPR008490 Transposase InsH, N-terminal BRM88_22595 IPR001260 Coproporphyrinogen III oxidase, aerobic BRM88_22595 IPR018375 Coproporphyrinogen III oxidase, conserved site BRM88_22595 IPR036406 BRM88_22595 BRM88_22610 IPR001098 DNA-directed DNA polymerase, family A, palm domain BRM88_22610 IPR002298 DNA polymerase A BRM88_22610 IPR002421 5'-3' exonuclease, N-terminal BRM88_22610 IPR002562 3'-5' exonuclease domain BRM88_22610 IPR008918 Helix-hairpin-helix motif, class 2 BRM88_22610 IPR012337 Ribonuclease H-like domain BRM88_22610 IPR018320 DNA polymerase 1 BRM88_22610 IPR019760 DNA-directed DNA polymerase, family A, conserved site BRM88_22610 IPR020045 5'-3' exonuclease, C-terminal domain BRM88_22610 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal BRM88_22610 IPR029060 PIN domain-like BRM88_22610 IPR036279 BRM88_22610 BRM88_22610 IPR036397 BRM88_22610 BRM88_22615 IPR021357 Protein of unknown function DUF2782 BRM88_22630 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type BRM88_22630 IPR005474 Transketolase, N-terminal BRM88_22630 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II BRM88_22630 IPR029061 Thiamin diphosphate-binding fold BRM88_22645 IPR005042 Avirulence protein PthA-related, Xanthomonas species BRM88_22660 IPR025948 HTH-like domain BRM88_22675 IPR001932 Protein phosphatase 2C (PP2C)-like domain BRM88_22675 IPR003660 HAMP linker domain BRM88_22675 IPR029151 Periplasmic sensor domain-like BRM88_22675 IPR033479 BRM88_22675 BRM88_22675 IPR036457 BRM88_22675 BRM88_22680 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_22680 IPR036890 BRM88_22680 BRM88_22685 IPR002645 STAS domain BRM88_22685 IPR036513 BRM88_22685 BRM88_22695 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BRM88_22695 IPR036761 BRM88_22695 BRM88_22700 IPR000415 Nitroreductase-like BRM88_22700 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE BRM88_22700 IPR029479 Nitroreductase BRM88_22705 IPR009367 Mitochondrial fission protein ELM1-like BRM88_22710 IPR014547 Uncharacterised conserved protein UCP028477 BRM88_22725 IPR003744 Protein of unknown function DUF165 BRM88_22730 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain BRM88_22730 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase BRM88_22730 IPR023057 Glutamate-ammonia-ligase adenylyltransferase BRM88_22735 IPR011051 RmlC-like cupin domain BRM88_22735 IPR014710 RmlC-like jelly roll fold BRM88_22740 IPR005511 Senescence marker protein-30 (SMP-30) BRM88_22740 IPR011042 Six-bladed beta-propeller, TolB-like BRM88_22740 IPR013658 SMP-30/Gluconolactonase/LRE-like region BRM88_22765 IPR024442 Transposase, zinc-ribbon BRM88_22765 IPR024445 Transposase, ISXO2-like BRM88_22780 IPR006218 DAHP synthetase I/KDSA BRM88_22780 IPR006219 DHAP synthase, class 1 BRM88_22780 IPR013785 Aldolase-type TIM barrel BRM88_22790 IPR000531 TonB-dependent receptor, beta-barrel BRM88_22795 IPR012910 TonB-dependent receptor, plug BRM88_22795 IPR037066 BRM88_22795 BRM88_22805 IPR001844 Chaperonin Cpn60 BRM88_22805 IPR002423 Chaperonin Cpn60/TCP-1 BRM88_22805 IPR018370 Chaperonin Cpn60, conserved site BRM88_22805 IPR027409 GroEL-like apical domain BRM88_22805 IPR027410 TCP-1-like chaperonin intermediate domain BRM88_22805 IPR027413 GroEL-like equatorial domain BRM88_22810 IPR011032 GroES (chaperonin 10)-like BRM88_22810 IPR018369 Chaperonin Cpn10, conserved site BRM88_22810 IPR020818 Chaperonin Cpn10 BRM88_22810 IPR037124 BRM88_22810 BRM88_22820 IPR021139 NYN domain, limkain-b1-type BRM88_22820 IPR025605 OST-HTH/LOTUS domain BRM88_22830 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain BRM88_22830 IPR036188 BRM88_22830 BRM88_22840 IPR000943 RNA polymerase sigma-70 BRM88_22840 IPR007627 RNA polymerase sigma-70 region 2 BRM88_22840 IPR007630 RNA polymerase sigma-70 region 4 BRM88_22840 IPR009042 RNA polymerase sigma-70 region 1.2 BRM88_22840 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria BRM88_22840 IPR013324 RNA polymerase sigma factor, region 3/4 BRM88_22840 IPR013325 RNA polymerase sigma factor, region 2 BRM88_22840 IPR014284 RNA polymerase sigma-70 like domain BRM88_22840 IPR036388 BRM88_22840 BRM88_22845 IPR002043 Uracil-DNA glycosylase BRM88_22845 IPR005122 Uracil-DNA glycosylase-like BRM88_22845 IPR018085 Uracil-DNA glycosylase, active site BRM88_22845 IPR036895 BRM88_22845 BRM88_22850 IPR001789 Signal transduction response regulator, receiver domain BRM88_22850 IPR011006 CheY-like superfamily BRM88_22855 IPR004513 ABC transporter, cell division protein FtsX BRM88_22860 IPR003439 ABC transporter-like BRM88_22860 IPR003593 AAA+ ATPase domain BRM88_22860 IPR005286 Cell division protein FtsE, ATP-binding BRM88_22860 IPR017871 ABC transporter, conserved site BRM88_22860 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_22865 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site BRM88_22865 IPR001650 Helicase, C-terminal BRM88_22865 IPR011545 DEAD/DEAH box helicase domain BRM88_22865 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BRM88_22865 IPR022077 ATP-dependent RNA helicase RhlB BRM88_22865 IPR023554 RNA helicase, ATP-dependent, RhlB-type BRM88_22865 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_22870 IPR005746 Thioredoxin BRM88_22870 IPR013766 Thioredoxin domain BRM88_22870 IPR017937 Thioredoxin, conserved site BRM88_22870 IPR036249 BRM88_22870 BRM88_22875 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BRM88_22875 IPR003593 AAA+ ATPase domain BRM88_22875 IPR004665 Transcription termination factor Rho BRM88_22875 IPR011112 Rho termination factor, N-terminal BRM88_22875 IPR011113 Rho termination factor, RNA-binding BRM88_22875 IPR011129 Cold shock protein BRM88_22875 IPR012340 Nucleic acid-binding, OB-fold BRM88_22875 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_22875 IPR036269 BRM88_22875 BRM88_22890 IPR000184 Bacterial surface antigen (D15) BRM88_22890 IPR010827 Surface antigen variable number BRM88_22890 IPR035243 BRM88_22890 BRM88_22895 IPR007452 Protein of unknown function DUF490 BRM88_22910 IPR029069 HotDog domain BRM88_22915 IPR004869 Membrane transport protein, MMPL domain BRM88_22925 IPR004960 Bacterial lipid A biosynthesis acyltransferase BRM88_22925 IPR014548 Predicted acyltransferase BRM88_22930 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ BRM88_22930 IPR016962 Dehydrase, ECs4332, predicted BRM88_22930 IPR029069 HotDog domain BRM88_22935 IPR002123 Phospholipid/glycerol acyltransferase BRM88_22935 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase BRM88_22945 IPR009081 Acyl carrier protein-like BRM88_22945 IPR036736 BRM88_22945 BRM88_22950 IPR002938 Monooxygenase, FAD-binding BRM88_22950 IPR036188 BRM88_22950 BRM88_22955 IPR035959 BRM88_22955 BRM88_22960 IPR010394 5-nucleotidase BRM88_22960 IPR036412 BRM88_22960 BRM88_22965 IPR000873 AMP-dependent synthetase/ligase BRM88_22975 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BRM88_22975 IPR002469 Peptidase S9B, dipeptidylpeptidase IV N-terminal BRM88_22975 IPR029058 Alpha/Beta hydrolase fold BRM88_22975 IPR038554 BRM88_22975 BRM88_23000 IPR007318 Phospholipid methyltransferase BRM88_23005 IPR002577 Helix-turn-helix, HxlR type BRM88_23005 IPR036388 BRM88_23005 BRM88_23005 IPR036390 BRM88_23005 BRM88_23010 IPR008030 NmrA-like domain BRM88_23010 IPR036291 BRM88_23010 BRM88_23025 IPR004684 2-keto-3-deoxygluconate permease BRM88_23025 IPR018395 2-keto-3-deoxygluconate permease, subgroup BRM88_23030 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal BRM88_23030 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit BRM88_23030 IPR038071 BRM88_23030 BRM88_23035 IPR015004 Protein of unknown function DUF1852 BRM88_23040 IPR005025 NADPH-dependent FMN reductase-like BRM88_23040 IPR019912 FMN reductase, MsuE-like BRM88_23040 IPR029039 Flavoprotein-like BRM88_23045 IPR000847 Transcription regulator HTH, LysR BRM88_23045 IPR005119 LysR, substrate-binding BRM88_23045 IPR036388 BRM88_23045 BRM88_23045 IPR036390 BRM88_23045 BRM88_23050 IPR003828 Protein of unknown function DUF208 BRM88_23060 IPR003171 Methylenetetrahydrofolate reductase BRM88_23060 IPR029041 FAD-linked oxidoreductase-like BRM88_23070 IPR001789 Signal transduction response regulator, receiver domain BRM88_23070 IPR001867 Signal transduction response regulator, C-terminal BRM88_23070 IPR011006 CheY-like superfamily BRM88_23070 IPR016032 Signal transduction response regulator, C-terminal effector BRM88_23070 IPR036388 BRM88_23070 BRM88_23075 IPR002376 Formyl transferase, N-terminal BRM88_23075 IPR002912 ACT domain BRM88_23075 IPR004810 Formyltetrahydrofolate deformylase BRM88_23075 IPR036477 BRM88_23075 BRM88_23095 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site BRM88_23095 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding BRM88_23095 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like BRM88_23095 IPR013328 Dehydrogenase, multihelical BRM88_23095 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type BRM88_23095 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain BRM88_23095 IPR036291 BRM88_23095 BRM88_23100 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal BRM88_23100 IPR013785 Aldolase-type TIM barrel BRM88_23105 IPR003000 Sirtuin family BRM88_23105 IPR026587 Sirtuin, class II BRM88_23105 IPR026591 Sirtuin family, catalytic core small domain BRM88_23105 IPR029035 DHS-like NAD/FAD-binding domain BRM88_23115 IPR005829 Sugar transporter, conserved site BRM88_23115 IPR011701 Major facilitator superfamily BRM88_23115 IPR036259 BRM88_23115 BRM88_23120 IPR000847 Transcription regulator HTH, LysR BRM88_23120 IPR005119 LysR, substrate-binding BRM88_23120 IPR036388 BRM88_23120 BRM88_23120 IPR036390 BRM88_23120 BRM88_23140 IPR001130 TatD family BRM88_23140 IPR018228 Deoxyribonuclease, TatD-related, conserved site BRM88_23140 IPR032466 BRM88_23140 BRM88_23155 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BRM88_23155 IPR011042 Six-bladed beta-propeller, TolB-like BRM88_23155 IPR029058 Alpha/Beta hydrolase fold BRM88_23160 IPR000073 Alpha/beta hydrolase fold-1 BRM88_23160 IPR029058 Alpha/Beta hydrolase fold BRM88_23165 IPR024442 Transposase, zinc-ribbon BRM88_23165 IPR024445 Transposase, ISXO2-like BRM88_23180 IPR009057 Homeodomain-like BRM88_23180 IPR025959 Winged helix-turn helix domain BRM88_23180 IPR038717 BRM88_23180 BRM88_23190 IPR000192 Aminotransferase class V domain BRM88_23190 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BRM88_23190 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BRM88_23190 IPR015424 Pyridoxal phosphate-dependent transferase BRM88_23190 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase BRM88_23195 IPR002509 Polysaccharide deacetylase BRM88_23195 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BRM88_23195 IPR017625 Putative urate catabolism protein BRM88_23200 IPR024507 Protein of unknown function DUF3225 BRM88_23200 IPR032710 BRM88_23200 BRM88_23205 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 BRM88_23205 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase BRM88_23205 IPR036778 BRM88_23205 BRM88_23215 IPR012337 Ribonuclease H-like domain BRM88_23215 IPR038721 BRM88_23215 BRM88_23255 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BRM88_23255 IPR002470 Peptidase S9A, prolyl oligopeptidase BRM88_23255 IPR011042 Six-bladed beta-propeller, TolB-like BRM88_23255 IPR029058 Alpha/Beta hydrolase fold BRM88_23260 IPR000089 Biotin/lipoyl attachment BRM88_23260 IPR001882 Biotin-binding site BRM88_23260 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain BRM88_23260 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal BRM88_23260 IPR005482 Biotin carboxylase, C-terminal BRM88_23260 IPR011053 Single hybrid motif BRM88_23260 IPR011054 Rudiment single hybrid motif BRM88_23260 IPR016185 Pre-ATP-grasp domain BRM88_23265 IPR029045 ClpP/crotonase-like domain BRM88_23265 IPR034733 BRM88_23265 BRM88_23270 IPR006089 Acyl-CoA dehydrogenase, conserved site BRM88_23270 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain BRM88_23270 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal BRM88_23270 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain BRM88_23270 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal BRM88_23270 IPR036250 BRM88_23270 BRM88_23270 IPR037069 BRM88_23270 BRM88_23275 IPR001647 DNA-binding HTH domain, TetR-type BRM88_23275 IPR009057 Homeodomain-like BRM88_23275 IPR036271 BRM88_23275 BRM88_23290 IPR021762 Protein of unknown function DUF3325 BRM88_23300 IPR022109 Protein of unknown function DUF3649 BRM88_23310 IPR009056 Cytochrome c-like domain BRM88_23310 IPR036909 BRM88_23310 BRM88_23315 IPR036691 BRM88_23315 BRM88_23320 IPR004891 MerC mercury resistance protein BRM88_23325 IPR003495 CobW/HypB/UreG domain BRM88_23325 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal BRM88_23325 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_23340 IPR022742 Putative lysophospholipase BRM88_23340 IPR029058 Alpha/Beta hydrolase fold BRM88_23345 IPR005654 ATPase, AFG1-like BRM88_23345 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_23345 IPR030870 BRM88_23345 BRM88_23360 IPR000531 TonB-dependent receptor, beta-barrel BRM88_23360 IPR012910 TonB-dependent receptor, plug BRM88_23360 IPR037066 BRM88_23360 BRM88_23365 IPR011990 Tetratricopeptide-like helical domain BRM88_23365 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_23370 IPR008909 DALR anticodon binding BRM88_23370 IPR015944 Glycine-tRNA ligase, beta subunit BRM88_23375 IPR002310 Glycine-tRNA ligase, alpha subunit BRM88_23380 IPR001482 Type II secretion system protein E BRM88_23380 IPR003593 AAA+ ATPase domain BRM88_23380 IPR007831 General secretory system II, protein E, N-terminal BRM88_23380 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_23380 IPR037257 BRM88_23380 BRM88_23385 IPR011989 Armadillo-like helical BRM88_23385 IPR016024 Armadillo-type fold BRM88_23405 IPR017926 Glutamine amidotransferase BRM88_23405 IPR029062 Class I glutamine amidotransferase-like BRM88_23415 IPR002033 Sec-independent periplasmic protein translocase TatC BRM88_23415 IPR019820 Sec-independent periplasmic protein translocase, conserved site BRM88_23420 IPR003369 Sec-independent protein translocase protein TatA/B/E BRM88_23420 IPR018448 Twin-arginine translocation protein TatB BRM88_23425 IPR003369 Sec-independent protein translocase protein TatA/B/E BRM88_23425 IPR006312 Sec-independent protein translocase protein TatA/E BRM88_23430 IPR007461 Ysc84 actin-binding domain BRM88_23435 IPR001015 Ferrochelatase BRM88_23435 IPR019772 Ferrochelatase, active site BRM88_23440 IPR000073 Alpha/beta hydrolase fold-1 BRM88_23440 IPR029058 Alpha/Beta hydrolase fold BRM88_23455 IPR002725 Protein of unknown function DUF45 BRM88_23465 IPR007476 Putative exonuclease, RdgC BRM88_23470 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase BRM88_23470 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA BRM88_23470 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BRM88_23470 IPR035107 BRM88_23470 BRM88_23480 IPR001998 Xylose isomerase BRM88_23480 IPR013452 Xylose isomerase, bacterial-type BRM88_23480 IPR036237 BRM88_23480 BRM88_23485 IPR000843 Transcription regulator HTH, LacI BRM88_23485 IPR010982 Lambda repressor-like, DNA-binding domain BRM88_23485 IPR028082 Periplasmic binding protein-like I BRM88_23490 IPR005154 Alpha glucuronidase, N-terminal BRM88_23490 IPR011099 Glycosyl hydrolase family 67, C-terminal BRM88_23490 IPR011100 Glycosyl hydrolase family 67 middle BRM88_23490 IPR011395 Alpha glucuronidase BRM88_23490 IPR017853 Glycoside hydrolase, superfamily BRM88_23490 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like BRM88_23490 IPR037054 BRM88_23490 BRM88_23495 IPR005181 Domain of unknown function DUF303, acetylesterase putative BRM88_23495 IPR006104 Glycosyl hydrolases family 2, sugar binding domain BRM88_23495 IPR008979 Galactose-binding domain-like BRM88_23495 IPR013783 Immunoglobulin-like fold BRM88_23495 IPR036514 BRM88_23495 BRM88_23500 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain BRM88_23500 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BRM88_23500 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site BRM88_23500 IPR029017 Enolase N-terminal domain-like BRM88_23500 IPR029065 Enolase C-terminal domain-like BRM88_23500 IPR036849 BRM88_23500 BRM88_23505 IPR006710 Glycoside hydrolase, family 43 BRM88_23505 IPR013320 Concanavalin A-like lectin/glucanase, subgroup BRM88_23505 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain BRM88_23510 IPR001764 Glycoside hydrolase, family 3, N-terminal BRM88_23510 IPR002772 Glycoside hydrolase family 3 C-terminal domain BRM88_23510 IPR011658 PA14 BRM88_23510 IPR013783 Immunoglobulin-like fold BRM88_23510 IPR017853 Glycoside hydrolase, superfamily BRM88_23510 IPR026891 Fibronectin type III-like domain BRM88_23510 IPR036881 BRM88_23510 BRM88_23510 IPR036962 BRM88_23510 BRM88_23515 IPR000669 Mannitol dehydrogenase BRM88_23515 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like BRM88_23515 IPR013118 Mannitol dehydrogenase, C-terminal BRM88_23515 IPR013131 Mannitol dehydrogenase, N-terminal BRM88_23515 IPR013328 Dehydrogenase, multihelical BRM88_23515 IPR036291 BRM88_23515 BRM88_23535 IPR003766 Uronate isomerase BRM88_23535 IPR032466 BRM88_23535 BRM88_23540 IPR001000 Glycoside hydrolase, family 10 BRM88_23540 IPR017853 Glycoside hydrolase, superfamily BRM88_23555 IPR011701 Major facilitator superfamily BRM88_23555 IPR036259 BRM88_23555 BRM88_23560 IPR000531 TonB-dependent receptor, beta-barrel BRM88_23560 IPR010104 Bacterial TonB-dependent receptor BRM88_23560 IPR010917 TonB-dependent receptor, conserved site BRM88_23560 IPR012910 TonB-dependent receptor, plug BRM88_23560 IPR036942 BRM88_23560 BRM88_23560 IPR037066 BRM88_23560 BRM88_23565 IPR001927 Sodium:galactoside symporter BRM88_23565 IPR036259 BRM88_23565 BRM88_23570 IPR006710 Glycoside hydrolase, family 43 BRM88_23570 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain BRM88_23595 IPR024442 Transposase, zinc-ribbon BRM88_23595 IPR024445 Transposase, ISXO2-like BRM88_23610 IPR001633 EAL domain BRM88_23610 IPR035919 BRM88_23610 BRM88_23615 IPR005804 Fatty acid desaturase, type 1 BRM88_23620 IPR001041 2Fe-2S ferredoxin-type domain BRM88_23620 IPR001433 Oxidoreductase FAD/NAD(P)-binding BRM88_23620 IPR001834 NADH:cytochrome b5 reductase (CBR) BRM88_23620 IPR008333 Oxidoreductase, FAD-binding domain BRM88_23620 IPR012675 Beta-grasp domain BRM88_23620 IPR017938 Riboflavin synthase-like beta-barrel BRM88_23620 IPR036010 BRM88_23620 BRM88_23620 IPR039261 BRM88_23620 BRM88_23625 IPR001647 DNA-binding HTH domain, TetR-type BRM88_23625 IPR009057 Homeodomain-like BRM88_23635 IPR012337 Ribonuclease H-like domain BRM88_23635 IPR038721 BRM88_23635 BRM88_23645 IPR001584 Integrase, catalytic core BRM88_23645 IPR012337 Ribonuclease H-like domain BRM88_23645 IPR025246 Transposase IS30-like HTH domain BRM88_23660 IPR000835 MarR-type HTH domain BRM88_23660 IPR036388 BRM88_23660 BRM88_23660 IPR036390 BRM88_23660 BRM88_23665 IPR003718 OsmC/Ohr family BRM88_23665 IPR015946 K homology domain-like, alpha/beta BRM88_23665 IPR019953 Organic hydroperoxide resistance protein famiy BRM88_23665 IPR036102 BRM88_23665 BRM88_23670 IPR021307 Protein of unknown function DUF2884 BRM88_23700 IPR001387 Cro/C1-type helix-turn-helix domain BRM88_23700 IPR010982 Lambda repressor-like, DNA-binding domain BRM88_23705 IPR028969 Immunity protein 32 BRM88_23710 IPR028904 Tox-REase-5 domain BRM88_23725 IPR008727 PAAR motif BRM88_23750 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain BRM88_23750 IPR036452 BRM88_23750 BRM88_23760 IPR001387 Cro/C1-type helix-turn-helix domain BRM88_23760 IPR010982 Lambda repressor-like, DNA-binding domain BRM88_23760 IPR013430 Toxin-antitoxin system, antidote protein, HigA BRM88_23765 IPR007711 Plasmid maintenance system killer BRM88_23765 IPR035093 BRM88_23765 BRM88_23770 IPR006344 Exodeoxyribonuclease V, alpha subunit BRM88_23770 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_23770 IPR027785 UvrD-like helicase C-terminal domain BRM88_23775 IPR004586 Exodeoxyribonuclease V, beta subunit BRM88_23775 IPR011335 Restriction endonuclease type II-like BRM88_23775 IPR011604 Exonuclease, phage-type/RecB, C-terminal BRM88_23775 IPR014017 DNA helicase, UvrD-like, C-terminal BRM88_23775 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_23775 IPR034739 BRM88_23775 BRM88_23775 IPR038726 BRM88_23775 BRM88_23780 IPR006697 Exodeoxyribonuclease V, gamma subunit BRM88_23780 IPR011335 Restriction endonuclease type II-like BRM88_23780 IPR013986 DExx box DNA helicase domain BRM88_23780 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_23795 IPR011083 Phage tail collar domain BRM88_23795 IPR037053 BRM88_23795 BRM88_23800 IPR011083 Phage tail collar domain BRM88_23800 IPR037053 BRM88_23800 BRM88_23805 IPR011083 Phage tail collar domain BRM88_23805 IPR037053 BRM88_23805 BRM88_23810 IPR024442 Transposase, zinc-ribbon BRM88_23810 IPR024445 Transposase, ISXO2-like BRM88_23820 IPR001424 Superoxide dismutase, copper/zinc binding domain BRM88_23820 IPR018152 Superoxide dismutase, copper/zinc, binding site BRM88_23820 IPR036423 BRM88_23820 BRM88_23825 IPR001424 Superoxide dismutase, copper/zinc binding domain BRM88_23825 IPR018152 Superoxide dismutase, copper/zinc, binding site BRM88_23825 IPR036423 BRM88_23825 BRM88_23830 IPR001789 Signal transduction response regulator, receiver domain BRM88_23830 IPR002078 RNA polymerase sigma factor 54 interaction domain BRM88_23830 IPR002197 DNA binding HTH domain, Fis-type BRM88_23830 IPR003593 AAA+ ATPase domain BRM88_23830 IPR009057 Homeodomain-like BRM88_23830 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) BRM88_23830 IPR011006 CheY-like superfamily BRM88_23830 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BRM88_23830 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BRM88_23830 IPR025944 Sigma-54 interaction domain, conserved site BRM88_23830 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_23835 IPR003594 Histidine kinase-like ATPase, C-terminal domain BRM88_23835 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain BRM88_23835 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BRM88_23835 IPR035965 BRM88_23835 BRM88_23835 IPR036097 BRM88_23835 BRM88_23835 IPR036890 BRM88_23835 BRM88_23840 IPR001905 Ammonium transporter BRM88_23840 IPR002229 Blood group Rhesus C/E/D polypeptide BRM88_23840 IPR018047 Ammonium transporter, conserved site BRM88_23840 IPR024041 Ammonium transporter AmtB-like domain BRM88_23840 IPR029020 Ammonium/urea transporter BRM88_23845 IPR002187 Nitrogen regulatory protein PII BRM88_23845 IPR002332 Nitrogen regulatory protein P-II, urydylation site BRM88_23845 IPR011322 Nitrogen regulatory PII-like, alpha/beta BRM88_23845 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BRM88_23845 IPR017918 Nitrogen regulatory protein PII, conserved site BRM88_23850 IPR004809 Glutamine synthetase type I BRM88_23850 IPR008146 Glutamine synthetase, catalytic domain BRM88_23850 IPR008147 Glutamine synthetase, beta-Grasp BRM88_23850 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain BRM88_23850 IPR027302 Glutamine synthetase, N-terminal conserved site BRM88_23850 IPR027303 Glutamine synthetase, glycine-rich site BRM88_23850 IPR036651 BRM88_23850 BRM88_23855 IPR003824 Undecaprenyl-diphosphatase UppP BRM88_23860 IPR005184 Domain of unknown function DUF306, Meta/HslJ BRM88_23860 IPR025485 Domain of unknown function DUF4377 BRM88_23860 IPR038670 BRM88_23860 BRM88_23870 IPR005247 YbhB/YbcL BRM88_23870 IPR008914 Phosphatidylethanolamine-binding protein PEBP BRM88_23870 IPR036610 BRM88_23870 BRM88_23875 IPR011990 Tetratricopeptide-like helical domain BRM88_23875 IPR019734 Tetratricopeptide repeat BRM88_23885 IPR000073 Alpha/beta hydrolase fold-1 BRM88_23885 IPR012020 AB-hydrolase YheT, putative BRM88_23885 IPR029058 Alpha/Beta hydrolase fold BRM88_23890 IPR002123 Phospholipid/glycerol acyltransferase BRM88_23895 IPR003736 Phenylacetic acid degradation-related domain BRM88_23895 IPR006683 Thioesterase superfamily BRM88_23895 IPR029069 HotDog domain BRM88_23900 IPR001736 Phospholipase D/Transphosphatidylase BRM88_23900 IPR025202 Phospholipase D-like domain BRM88_23905 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BRM88_23905 IPR036761 BRM88_23905 BRM88_23910 IPR013078 Histidine phosphatase superfamily, clade-1 BRM88_23910 IPR029033 Histidine phosphatase superfamily BRM88_23915 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain BRM88_23915 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_23920 IPR004776 Auxin efflux carrier BRM88_23920 IPR038770 BRM88_23920 BRM88_23930 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain BRM88_23930 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II BRM88_23930 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain BRM88_23930 IPR029061 Thiamin diphosphate-binding fold BRM88_23935 IPR001387 Cro/C1-type helix-turn-helix domain BRM88_23935 IPR010982 Lambda repressor-like, DNA-binding domain BRM88_23935 IPR017507 Transcription regulator, HipB-like BRM88_23940 IPR012893 HipA-like, C-terminal BRM88_23940 IPR017508 HipA, N-terminal subdomain 1 BRM88_23945 IPR017804 Methyltransferase EgtD-like BRM88_23945 IPR019257 Histidine-specific methyltransferase, SAM-dependent BRM88_23945 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_23945 IPR035094 BRM88_23945 BRM88_23950 IPR005532 Formylglycine-generating sulphatase enzyme domain BRM88_23950 IPR016187 C-type lectin fold BRM88_23950 IPR017806 Ergothioneine biosynthesis protein EgtB BRM88_23950 IPR024775 DinB-like domain BRM88_23955 IPR000192 Aminotransferase class V domain BRM88_23955 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 BRM88_23955 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 BRM88_23955 IPR015424 Pyridoxal phosphate-dependent transferase BRM88_23960 IPR000515 MetI-like domain BRM88_23960 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain BRM88_23960 IPR035906 BRM88_23960 BRM88_23965 IPR003439 ABC transporter-like BRM88_23965 IPR003593 AAA+ ATPase domain BRM88_23965 IPR017871 ABC transporter, conserved site BRM88_23965 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_23970 IPR002048 EF-hand domain BRM88_23970 IPR011992 EF-hand domain pair BRM88_23970 IPR018247 EF-Hand 1, calcium-binding site BRM88_23975 IPR005804 Fatty acid desaturase, type 1 BRM88_23980 IPR003439 ABC transporter-like BRM88_23980 IPR003593 AAA+ ATPase domain BRM88_23980 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_23990 IPR002641 Patatin/Phospholipase A2-related BRM88_23990 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BRM88_24005 IPR002559 Transposase, IS4-like BRM88_24005 IPR008490 Transposase InsH, N-terminal BRM88_24030 IPR018170 Aldo/keto reductase, conserved site BRM88_24030 IPR020471 Aldo/keto reductase subgroup BRM88_24030 IPR023210 NADP-dependent oxidoreductase domain BRM88_24030 IPR036812 BRM88_24030 BRM88_24035 IPR011032 GroES (chaperonin 10)-like BRM88_24035 IPR013149 Alcohol dehydrogenase, C-terminal BRM88_24035 IPR020843 Polyketide synthase, enoylreductase BRM88_24035 IPR036291 BRM88_24035 BRM88_24040 IPR023210 NADP-dependent oxidoreductase domain BRM88_24040 IPR036812 BRM88_24040 BRM88_24045 IPR016980 S-adenosyl-L-methionine dependent methyltransferase, Alr7345, predicted BRM88_24045 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_24050 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BRM88_24050 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F BRM88_24050 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site BRM88_24050 IPR020103 Pseudouridine synthase, catalytic domain BRM88_24065 IPR001650 Helicase, C-terminal BRM88_24065 IPR007502 Helicase-associated domain BRM88_24065 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type BRM88_24065 IPR013689 RNA helicase, ATP-dependent, HrpB type, C-terminal BRM88_24065 IPR014001 Helicase, superfamily 1/2, ATP-binding domain BRM88_24065 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_24070 IPR009921 Domain of unknown function DUF1456 BRM88_24075 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain BRM88_24075 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BRM88_24075 IPR029017 Enolase N-terminal domain-like BRM88_24075 IPR029065 Enolase C-terminal domain-like BRM88_24075 IPR036849 BRM88_24075 BRM88_24085 IPR011234 Fumarylacetoacetase, C-terminal-related BRM88_24085 IPR036663 BRM88_24085 BRM88_24090 IPR002347 Glucose/ribitol dehydrogenase BRM88_24090 IPR020904 Short-chain dehydrogenase/reductase, conserved site BRM88_24090 IPR036291 BRM88_24090 BRM88_24095 IPR006680 Amidohydrolase 1 BRM88_24095 IPR032466 BRM88_24095 BRM88_24100 IPR023210 NADP-dependent oxidoreductase domain BRM88_24100 IPR036812 BRM88_24100 BRM88_24110 IPR006710 Glycoside hydrolase, family 43 BRM88_24110 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain BRM88_24135 IPR000792 Transcription regulator LuxR, C-terminal BRM88_24135 IPR001789 Signal transduction response regulator, receiver domain BRM88_24135 IPR011006 CheY-like superfamily BRM88_24135 IPR016032 Signal transduction response regulator, C-terminal effector BRM88_24135 IPR036388 BRM88_24135 BRM88_24140 IPR000873 AMP-dependent synthetase/ligase BRM88_24140 IPR011904 Acetate-CoA ligase BRM88_24140 IPR020845 AMP-binding, conserved site BRM88_24140 IPR025110 AMP-binding enzyme C-terminal domain BRM88_24140 IPR032387 BRM88_24140 BRM88_24155 IPR007436 Protein of unknown function DUF485 BRM88_24160 IPR001734 Sodium/solute symporter BRM88_24160 IPR018212 Sodium/solute symporter, conserved site BRM88_24160 IPR038377 BRM88_24160 BRM88_24170 IPR000600 ROK BRM88_24170 IPR036388 BRM88_24170 BRM88_24170 IPR036390 BRM88_24170 BRM88_24175 IPR004808 AP endonuclease 1 BRM88_24175 IPR005135 Endonuclease/exonuclease/phosphatase BRM88_24175 IPR020847 AP endonuclease 1, binding site BRM88_24175 IPR020848 AP endonuclease 1, conserved site BRM88_24175 IPR036691 BRM88_24175 BRM88_24180 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V BRM88_24180 IPR011057 Mss4-like BRM88_24185 IPR007341 Transglycosylase-associated protein BRM88_24190 IPR008278 4'-phosphopantetheinyl transferase superfamily BRM88_24190 IPR037143 BRM88_24190 BRM88_24195 IPR008963 Purple acid phosphatase-like, N-terminal BRM88_24195 IPR018946 Alkaline phosphatase D-related BRM88_24195 IPR032093 BRM88_24195 BRM88_24195 IPR038607 BRM88_24195 BRM88_24200 IPR008963 Purple acid phosphatase-like, N-terminal BRM88_24200 IPR018946 Alkaline phosphatase D-related BRM88_24200 IPR032093 BRM88_24200 BRM88_24200 IPR038607 BRM88_24200 BRM88_24205 IPR003682 rRNA small subunit methyltransferase G BRM88_24205 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_24220 IPR001383 Ribosomal protein L28 BRM88_24220 IPR026569 Ribosomal protein L28/L24 BRM88_24220 IPR034704 BRM88_24220 BRM88_24220 IPR037147 BRM88_24220 BRM88_24225 IPR001705 Ribosomal protein L33 BRM88_24225 IPR011332 Zinc-binding ribosomal protein BRM88_24225 IPR018264 Ribosomal protein L33, conserved site BRM88_24225 IPR038584 BRM88_24225 BRM88_24230 IPR006680 Amidohydrolase 1 BRM88_24230 IPR032466 BRM88_24230 BRM88_24235 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 BRM88_24235 IPR032877 BRM88_24235 BRM88_24250 IPR007400 PrpF protein BRM88_24255 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase BRM88_24255 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase BRM88_24255 IPR036704 BRM88_24255 BRM88_24260 IPR000847 Transcription regulator HTH, LysR BRM88_24260 IPR005119 LysR, substrate-binding BRM88_24260 IPR036388 BRM88_24260 BRM88_24260 IPR036390 BRM88_24260 BRM88_24265 IPR001736 Phospholipase D/Transphosphatidylase BRM88_24265 IPR022924 Cardiolipin synthase BRM88_24265 IPR025202 Phospholipase D-like domain BRM88_24265 IPR027379 Cardiolipin synthase N-terminal BRM88_24275 IPR036188 BRM88_24275 BRM88_24275 IPR038732 BRM88_24275 BRM88_24285 IPR005753 DNA helicase, ATP-dependent, UvrD type BRM88_24285 IPR013986 DExx box DNA helicase domain BRM88_24285 IPR014017 DNA helicase, UvrD-like, C-terminal BRM88_24285 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_24285 IPR034739 BRM88_24285 BRM88_24295 IPR024442 Transposase, zinc-ribbon BRM88_24295 IPR024445 Transposase, ISXO2-like BRM88_24300 IPR002293 Amino acid/polyamine transporter I BRM88_24310 IPR003798 DNA recombination RmuC BRM88_24310 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 BRM88_24310 IPR036291 BRM88_24310 BRM88_24320 IPR000889 Glutathione peroxidase BRM88_24320 IPR029759 Glutathione peroxidase active site BRM88_24320 IPR036249 BRM88_24320 BRM88_24330 IPR012337 Ribonuclease H-like domain BRM88_24330 IPR038721 BRM88_24330 BRM88_24340 IPR006638 Elongator protein 3/MiaB/NifB BRM88_24340 IPR007197 Radical SAM BRM88_24350 IPR005017 Membrane protein, aromatic hydrocarbon degradation BRM88_24355 IPR022764 Peptidase S54, rhomboid domain BRM88_24355 IPR035952 BRM88_24355 BRM88_24360 IPR014949 Protein of unknown function DUF1820 BRM88_24365 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BRM88_24365 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain BRM88_24365 IPR036291 BRM88_24365 BRM88_24375 IPR001478 PDZ domain BRM88_24375 IPR004447 C-terminal-processing peptidase S41A BRM88_24375 IPR005151 Tail specific protease BRM88_24375 IPR029045 ClpP/crotonase-like domain BRM88_24375 IPR036034 BRM88_24375 BRM88_24380 IPR011055 Duplicated hybrid motif BRM88_24380 IPR016047 Peptidase M23 BRM88_24390 IPR003137 Protease-associated domain, PA BRM88_24390 IPR007484 Peptidase M28 BRM88_24395 IPR025711 PepSY domain BRM88_24405 IPR012337 Ribonuclease H-like domain BRM88_24405 IPR038721 BRM88_24405 BRM88_24415 IPR014544 Uncharacterised conserved protein UCP028408 BRM88_24415 IPR024534 Domain of unknown function DUF2220 BRM88_24415 IPR024537 Domain of unknown function DUF3322 BRM88_24420 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_24425 IPR025449 Protein of unknown function DUF4194 BRM88_24430 IPR021804 Protein of unknown function DUF3375 BRM88_24435 IPR025455 Protein of unknown function DUF4276 BRM88_24440 IPR003959 ATPase, AAA-type, core BRM88_24440 IPR014555 RecF-like BRM88_24440 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_24445 IPR001474 GTP cyclohydrolase I BRM88_24445 IPR018234 GTP cyclohydrolase I, conserved site BRM88_24445 IPR020602 GTP cyclohydrolase I domain BRM88_24460 IPR003423 Outer membrane efflux protein BRM88_24465 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein BRM88_24470 IPR005828 General substrate transporter BRM88_24470 IPR005829 Sugar transporter, conserved site BRM88_24470 IPR036259 BRM88_24470 BRM88_24480 IPR001736 Phospholipase D/Transphosphatidylase BRM88_24480 IPR025202 Phospholipase D-like domain BRM88_24490 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family BRM88_24490 IPR035093 BRM88_24490 BRM88_24510 IPR002559 Transposase, IS4-like BRM88_24510 IPR008490 Transposase InsH, N-terminal BRM88_24520 IPR028969 Immunity protein 32 BRM88_24525 IPR028904 Tox-REase-5 domain BRM88_24535 IPR025391 Domain of unknown function DUF4123 BRM88_24540 IPR008727 PAAR motif BRM88_24575 IPR004381 Glycerate kinase BRM88_24575 IPR018193 Glycerate kinase, flavodoxin-like domain BRM88_24575 IPR018197 Glycerate kinase, restriction-enzyme-like fold BRM88_24575 IPR036129 BRM88_24575 BRM88_24580 IPR011701 Major facilitator superfamily BRM88_24580 IPR036259 BRM88_24580 BRM88_24595 IPR002478 PUA domain BRM88_24595 IPR015947 PUA-like domain BRM88_24595 IPR019614 S-adenosylmethionine-dependent methyltransferase BRM88_24595 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like BRM88_24595 IPR036974 BRM88_24595 BRM88_24605 IPR005496 Integral membrane protein TerC BRM88_24605 IPR022369 Integral membrane protein TerC, riboswitch-linked BRM88_24610 IPR022764 Peptidase S54, rhomboid domain BRM88_24610 IPR035952 BRM88_24610 BRM88_24615 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain BRM88_24615 IPR030395 BRM88_24615 BRM88_24625 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BRM88_24625 IPR001011 Acid phosphatase, class A, bacterial BRM88_24625 IPR018296 Acid phosphatase, class A, bacterial, conserved site BRM88_24625 IPR036938 BRM88_24625 BRM88_24630 IPR004520 tRNA modification GTPase MnmE BRM88_24630 IPR005225 Small GTP-binding protein domain BRM88_24630 IPR006073 GTP binding domain BRM88_24630 IPR018948 GTP-binding protein TrmE, N-terminal BRM88_24630 IPR025867 tRNA modification GTPase MnmE C-terminal domain BRM88_24630 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 BRM88_24630 IPR027368 tRNA modification GTPase MnmE domain 2 BRM88_24630 IPR027417 P-loop containing nucleoside triphosphate hydrolase BRM88_24635 IPR002509 Polysaccharide deacetylase BRM88_24635 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BRM88_24635 IPR011990 Tetratricopeptide-like helical domain BRM88_24635 IPR018247 EF-Hand 1, calcium-binding site BRM88_24635 IPR019734 Tetratricopeptide repeat BRM88_24635 IPR029030 Caspase-like domain BRM88_24640 IPR001708 Membrane insertase OXA1/ALB3/YidC BRM88_24640 IPR019998 Membrane insertase YidC BRM88_24640 IPR028053 Membrane insertase YidC, N-terminal BRM88_24640 IPR028055 Membrane insertase YidC/Oxa1, C-terminal BRM88_24640 IPR038210 BRM88_24640 BRM88_24640 IPR038221 BRM88_24640 BRM88_24645 IPR000100 Ribonuclease P BRM88_24645 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BRM88_24645 IPR020539 Ribonuclease P, conserved site BRM88_24645 IPR020568 Ribosomal protein S5 domain 2-type fold BRM88_24650 IPR000271 Ribosomal protein L34 BRM88_24650 IPR020939 Ribosomal protein L34, conserved site