locus-tag class description FDU21_00060 PF02616 Segregation and condensation protein ScpA FDU21_00165 PF00444 Ribosomal protein L36 FDU21_00285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDU21_00285 PF03466 LysR substrate binding domain FDU21_00345 PF03618 Kinase/pyrophosphorylase FDU21_00450 PF00072 Response regulator receiver domain FDU21_00475 PF07690 Major Facilitator Superfamily FDU21_00590 PF13393 Histidyl-tRNA synthetase FDU21_00590 PF03129 Anticodon binding domain FDU21_00610 PF01634 ATP phosphoribosyltransferase FDU21_00610 PF08029 HisG, C-terminal domain FDU21_00645 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FDU21_00645 PF01502 Phosphoribosyl-AMP cyclohydrolase FDU21_00680 PF02810 SEC-C motif FDU21_00680 PF07517 SecA DEAD-like domain FDU21_00680 PF07516 SecA Wing and Scaffold domain FDU21_00680 PF01043 SecA preprotein cross-linking domain FDU21_00760 PF13340 Putative transposase of IS4/5 family (DUF4096) FDU21_00835 PF13276 HTH-like domain FDU21_00835 PF00665 Integrase core domain FDU21_00835 PF13333 Integrase core domain FDU21_00905 PF01451 Low molecular weight phosphotyrosine protein phosphatase FDU21_00915 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FDU21_00950 PF00005 ABC transporter FDU21_00965 PF03937 Flavinator of succinate dehydrogenase FDU21_00980 PF00890 FAD binding domain FDU21_00980 PF02910 Fumarate reductase flavoprotein C-term FDU21_00985 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FDU21_01060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDU21_01060 PF00512 His Kinase A (phospho-acceptor) domain FDU21_01060 PF00672 HAMP domain FDU21_01060 PF01627 Hpt domain FDU21_01060 PF00072 Response regulator receiver domain FDU21_01060 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FDU21_01130 PF05683 Fumarase C-terminus FDU21_01130 PF05681 Fumarate hydratase (Fumerase) FDU21_01280 PF02261 Aspartate decarboxylase FDU21_01285 PF02569 Pantoate-beta-alanine ligase FDU21_01295 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FDU21_01300 PF01743 Poly A polymerase head domain FDU21_01300 PF12627 Probable RNA and SrmB- binding site of polymerase A FDU21_01300 PF12626 Polymerase A arginine-rich C-terminus FDU21_01310 PF02649 Type I GTP cyclohydrolase folE2 FDU21_01365 PF00072 Response regulator receiver domain FDU21_01365 PF13426 PAS domain FDU21_01365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDU21_01365 PF00512 His Kinase A (phospho-acceptor) domain FDU21_01365 PF08448 PAS fold FDU21_01410 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FDU21_01470 PF07969 Amidohydrolase family FDU21_01500 PF01527 Transposase FDU21_01525 PF00152 tRNA synthetases class II (D, K and N) FDU21_01550 PF01281 Ribosomal protein L9, N-terminal domain FDU21_01550 PF03948 Ribosomal protein L9, C-terminal domain FDU21_01555 PF01084 Ribosomal protein S18 FDU21_01650 PF01513 ATP-NAD kinase FDU21_01710 PF00293 NUDIX domain FDU21_01720 PF00378 Enoyl-CoA hydratase/isomerase FDU21_01730 PF10576 Iron-sulfur binding domain of endonuclease III FDU21_01730 PF00633 Helix-hairpin-helix motif FDU21_01730 PF00730 HhH-GPD superfamily base excision DNA repair protein FDU21_01770 PF00528 Binding-protein-dependent transport system inner membrane component FDU21_01795 PF00929 Exonuclease FDU21_01855 PF02699 Preprotein translocase subunit FDU21_01970 PF00037 4Fe-4S binding domain FDU21_02065 PF00994 Probable molybdopterin binding domain FDU21_02065 PF03453 MoeA N-terminal region (domain I and II) FDU21_02065 PF03454 MoeA C-terminal region (domain IV) FDU21_02115 PF02803 Thiolase, C-terminal domain FDU21_02115 PF00108 Thiolase, N-terminal domain FDU21_02130 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FDU21_02210 PF04356 Protein of unknown function (DUF489) FDU21_02275 PF00460 Flagella basal body rod protein FDU21_02275 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDU21_02295 PF00460 Flagella basal body rod protein FDU21_02295 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDU21_02350 PF00196 Bacterial regulatory proteins, luxR family FDU21_02350 PF00072 Response regulator receiver domain FDU21_02370 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FDU21_02435 PF02049 Flagellar hook-basal body complex protein FliE FDU21_02490 PF00813 FliP family FDU21_02500 PF01313 Bacterial export proteins, family 3 FDU21_02520 PF00990 Diguanylate cyclase, GGDEF domain FDU21_02520 PF00563 EAL domain FDU21_02520 PF03707 Bacterial signalling protein N terminal repeat FDU21_02525 PF00990 Diguanylate cyclase, GGDEF domain FDU21_02525 PF08448 PAS fold FDU21_02535 PF01312 FlhB HrpN YscU SpaS Family FDU21_02855 PF00764 Arginosuccinate synthase FDU21_02860 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FDU21_02860 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FDU21_02870 PF01406 tRNA synthetases class I (C) catalytic domain FDU21_02870 PF09190 DALR domain FDU21_02890 PF01258 Prokaryotic dksA/traR C4-type zinc finger FDU21_02905 PF01979 Amidohydrolase family FDU21_02910 PF08460 Bacterial SH3 domain FDU21_02910 PF01551 Peptidase family M23 FDU21_03000 PF09285 Elongation factor P, C-terminal FDU21_03000 PF08207 Elongation factor P (EF-P) KOW-like domain FDU21_03000 PF01132 Elongation factor P (EF-P) OB domain FDU21_03080 PF02798 Glutathione S-transferase, N-terminal domain FDU21_03080 PF14497 Glutathione S-transferase, C-terminal domain FDU21_03085 PF00313 'Cold-shock' DNA-binding domain FDU21_03090 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FDU21_03115 PF00749 tRNA synthetases class I (E and Q), catalytic domain FDU21_03125 PF07879 PHB/PHA accumulation regulator DNA-binding domain FDU21_03125 PF05233 PHB accumulation regulatory domain FDU21_03385 PF02130 Uncharacterized protein family UPF0054 FDU21_03395 PF03471 Transporter associated domain FDU21_03395 PF00571 CBS domain FDU21_03615 PF00294 pfkB family carbohydrate kinase FDU21_03800 PF01618 MotA/TolQ/ExbB proton channel family FDU21_03825 PF00072 Response regulator receiver domain FDU21_03905 PF07238 PilZ domain FDU21_03905 PF07317 Flagellar regulator YcgR FDU21_03910 PF01584 CheW-like domain FDU21_03950 PF01339 CheB methylesterase FDU21_03950 PF00072 Response regulator receiver domain FDU21_04005 PF00378 Enoyl-CoA hydratase/isomerase FDU21_04125 PF00155 Aminotransferase class I and II FDU21_04235 PF13378 Enolase C-terminal domain-like FDU21_04235 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FDU21_04250 PF00037 4Fe-4S binding domain FDU21_04250 PF11953 Domain of unknown function (DUF3470) FDU21_04290 PF08543 Phosphomethylpyrimidine kinase FDU21_04325 PF17954 Quercetinase C-terminal cupin domain FDU21_04325 PF02678 Pirin FDU21_04375 PF02599 Global regulator protein family FDU21_04405 PF02464 Competence-damaged protein FDU21_04450 PF01476 LysM domain FDU21_04450 PF01551 Peptidase family M23 FDU21_04500 PF00113 Enolase, C-terminal TIM barrel domain FDU21_04500 PF03952 Enolase, N-terminal domain FDU21_04510 PF00793 DAHP synthetase I family FDU21_04605 PF00664 ABC transporter transmembrane region FDU21_04605 PF00005 ABC transporter FDU21_04620 PF00005 ABC transporter FDU21_04700 PF05523 WxcM-like, C-terminal FDU21_04750 PF04995 Heme exporter protein D (CcmD) FDU21_04765 PF08534 Redoxin FDU21_05035 PF05638 Type VI secretion system effector, Hcp FDU21_05125 PF01329 Pterin 4 alpha carbinolamine dehydratase FDU21_05140 PF02535 ZIP Zinc transporter FDU21_05165 PF13340 Putative transposase of IS4/5 family (DUF4096) FDU21_05185 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDU21_05505 PF00730 HhH-GPD superfamily base excision DNA repair protein FDU21_05505 PF00633 Helix-hairpin-helix motif FDU21_05505 PF14815 NUDIX domain FDU21_05510 PF04362 Bacterial Fe(2+) trafficking FDU21_05735 PF00453 Ribosomal protein L20 FDU21_05740 PF01632 Ribosomal protein L35 FDU21_05785 PF07963 Prokaryotic N-terminal methylation motif FDU21_05785 PF00114 Pilin (bacterial filament) FDU21_05895 PF00312 Ribosomal protein S15 FDU21_05905 PF02033 Ribosome-binding factor A FDU21_05930 PF00361 Proton-conducting membrane transporter FDU21_05950 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FDU21_05955 PF12838 4Fe-4S dicluster domain FDU21_05965 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal FDU21_05965 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FDU21_05965 PF00384 Molybdopterin oxidoreductase FDU21_05980 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FDU21_05985 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FDU21_05990 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FDU21_05995 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FDU21_06160 PF05872 Bacterial protein of unknown function (DUF853) FDU21_06255 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDU21_06255 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FDU21_06275 PF04235 Protein of unknown function (DUF418) FDU21_06325 PF02609 Exonuclease VII small subunit FDU21_06330 PF00348 Polyprenyl synthetase FDU21_06400 PF02545 Maf-like protein FDU21_06490 PF00085 Thioredoxin FDU21_06730 PF00588 SpoU rRNA Methylase family FDU21_06730 PF08032 RNA 2'-O ribose methyltransferase substrate binding FDU21_06800 PF01507 Phosphoadenosine phosphosulfate reductase family FDU21_06875 PF00274 Fructose-bisphosphate aldolase class-I FDU21_06890 PF00162 Phosphoglycerate kinase FDU21_06965 PF02311 AraC-like ligand binding domain FDU21_06965 PF12833 Helix-turn-helix domain FDU21_07200 PF01420 Type I restriction modification DNA specificity domain FDU21_07460 PF00182 Chitinase class I FDU21_07565 PF04717 Type VI secretion system, phage-baseplate injector FDU21_07565 PF16671 Actin cross-linking domain FDU21_07580 PF00691 OmpA family FDU21_07580 PF04972 BON domain FDU21_07645 PF00730 HhH-GPD superfamily base excision DNA repair protein FDU21_07660 PF00072 Response regulator receiver domain FDU21_07660 PF00196 Bacterial regulatory proteins, luxR family FDU21_07735 PF07690 Major Facilitator Superfamily FDU21_07740 PF03412 Peptidase C39 family FDU21_07740 PF00664 ABC transporter transmembrane region FDU21_07740 PF00005 ABC transporter FDU21_07745 PF12857 TOBE-like domain FDU21_07745 PF00005 ABC transporter FDU21_07825 PF01196 Ribosomal protein L17 FDU21_07845 PF00416 Ribosomal protein S13/S18 FDU21_07855 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FDU21_07860 PF00327 Ribosomal protein L30p/L7e FDU21_07865 PF00333 Ribosomal protein S5, N-terminal domain FDU21_07865 PF03719 Ribosomal protein S5, C-terminal domain FDU21_07870 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FDU21_07895 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FDU21_07895 PF00467 KOW motif FDU21_07905 PF00366 Ribosomal protein S17 FDU21_07910 PF00831 Ribosomal L29 protein FDU21_07920 PF00189 Ribosomal protein S3, C-terminal domain FDU21_07920 PF07650 KH domain FDU21_07930 PF00203 Ribosomal protein S19 FDU21_07940 PF00276 Ribosomal protein L23 FDU21_07950 PF00297 Ribosomal protein L3 FDU21_07955 PF00338 Ribosomal protein S10p/S20e FDU21_07965 PF00009 Elongation factor Tu GTP binding domain FDU21_07965 PF03144 Elongation factor Tu domain 2 FDU21_07965 PF03143 Elongation factor Tu C-terminal domain FDU21_08000 PF00466 Ribosomal protein L10 FDU21_08005 PF00687 Ribosomal protein L1p/L10e family FDU21_08010 PF03946 Ribosomal protein L11, N-terminal domain FDU21_08010 PF00298 Ribosomal protein L11, RNA binding domain FDU21_08020 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FDU21_08055 PF01195 Peptidyl-tRNA hydrolase FDU21_08095 PF00472 RF-1 domain FDU21_08095 PF03462 PCRF domain FDU21_08110 PF00994 Probable molybdopterin binding domain FDU21_08115 PF03976 Polyphosphate kinase 2 (PPK2) FDU21_08165 PF04073 Aminoacyl-tRNA editing domain FDU21_08205 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FDU21_08260 PF00561 alpha/beta hydrolase fold FDU21_08290 PF10417 C-terminal domain of 1-Cys peroxiredoxin FDU21_08290 PF00578 AhpC/TSA family FDU21_08295 PF13192 Thioredoxin domain FDU21_08295 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDU21_08310 PF01272 Transcription elongation factor, GreA/GreB, C-term FDU21_08310 PF03449 Transcription elongation factor, N-terminal FDU21_08380 PF00462 Glutaredoxin FDU21_08390 PF00486 Transcriptional regulatory protein, C terminal FDU21_08390 PF00072 Response regulator receiver domain FDU21_08420 PF00149 Calcineurin-like phosphoesterase FDU21_08440 PF04305 Protein of unknown function (DUF455) FDU21_08470 PF00300 Histidine phosphatase superfamily (branch 1) FDU21_08515 PF00528 Binding-protein-dependent transport system inner membrane component FDU21_08605 PF00072 Response regulator receiver domain FDU21_08605 PF00990 Diguanylate cyclase, GGDEF domain FDU21_08715 PF00378 Enoyl-CoA hydratase/isomerase FDU21_08800 PF00639 PPIC-type PPIASE domain FDU21_08800 PF09312 SurA N-terminal domain FDU21_08840 PF00303 Thymidylate synthase FDU21_09135 PF02219 Methylenetetrahydrofolate reductase FDU21_09180 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FDU21_09200 PF07478 D-ala D-ala ligase C-terminus FDU21_09200 PF01820 D-ala D-ala ligase N-terminus FDU21_09205 PF08245 Mur ligase middle domain FDU21_09205 PF01225 Mur ligase family, catalytic domain FDU21_09205 PF02875 Mur ligase family, glutamate ligase domain FDU21_09240 PF04999 Cell division protein FtsL FDU21_09295 PF04307 LexA-binding, inner membrane-associated putative hydrolase FDU21_09305 PF00072 Response regulator receiver domain FDU21_09305 PF00486 Transcriptional regulatory protein, C terminal FDU21_09355 PF01029 NusB family FDU21_09380 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FDU21_09380 PF01872 RibD C-terminal domain FDU21_09390 PF03477 ATP cone domain FDU21_09470 PF00072 Response regulator receiver domain FDU21_09470 PF00486 Transcriptional regulatory protein, C terminal FDU21_09525 PF04107 Glutamate-cysteine ligase family 2(GCS2) FDU21_09545 PF00034 Cytochrome c FDU21_09820 PF00512 His Kinase A (phospho-acceptor) domain FDU21_09820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDU21_09825 PF00072 Response regulator receiver domain FDU21_09835 PF04972 BON domain FDU21_09840 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FDU21_09840 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FDU21_09845 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FDU21_09845 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FDU21_09915 PF04359 Protein of unknown function (DUF493) FDU21_09935 PF03330 Lytic transglycolase FDU21_09935 PF05036 Sporulation related domain FDU21_10085 PF01209 ubiE/COQ5 methyltransferase family FDU21_10115 PF00227 Proteasome subunit FDU21_10135 PF01678 Diaminopimelate epimerase FDU21_10190 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FDU21_10190 PF03900 Porphobilinogen deaminase, C-terminal domain FDU21_10195 PF04397 LytTr DNA-binding domain FDU21_10195 PF00072 Response regulator receiver domain FDU21_10370 PF07759 Protein of unknown function (DUF1615) FDU21_10440 PF00425 chorismate binding enzyme FDU21_10440 PF04715 Anthranilate synthase component I, N terminal region FDU21_10445 PF00781 Diacylglycerol kinase catalytic domain FDU21_10535 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FDU21_10690 PF01427 D-ala-D-ala dipeptidase FDU21_10735 PF13520 Amino acid permease FDU21_10815 PF00814 Glycoprotease family FDU21_10820 PF01165 Ribosomal protein S21 FDU21_10825 PF09424 Yqey-like protein FDU21_10905 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FDU21_10950 PF00210 Ferritin-like domain FDU21_10975 PF00380 Ribosomal protein S9/S16 FDU21_10980 PF00572 Ribosomal protein L13 FDU21_10990 PF00893 Small Multidrug Resistance protein FDU21_11000 PF00027 Cyclic nucleotide-binding domain FDU21_11000 PF00325 Bacterial regulatory proteins, crp family FDU21_11115 PF14489 QueF-like protein FDU21_11115 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FDU21_11215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDU21_11215 PF00512 His Kinase A (phospho-acceptor) domain FDU21_11260 PF13784 Fic/DOC family N-terminal FDU21_11260 PF02661 Fic/DOC family FDU21_11350 PF03692 Putative zinc- or iron-chelating domain FDU21_11455 PF01966 HD domain FDU21_11460 PF01966 HD domain FDU21_11460 PF13286 Phosphohydrolase-associated domain FDU21_11540 PF04264 YceI-like domain FDU21_11570 PF02592 Putative vitamin uptake transporter FDU21_11620 PF00793 DAHP synthetase I family FDU21_11645 PF00166 Chaperonin 10 Kd subunit FDU21_11680 PF04542 Sigma-70 region 2 FDU21_11680 PF04545 Sigma-70, region 4 FDU21_11685 PF03167 Uracil DNA glycosylase superfamily FDU21_11700 PF00005 ABC transporter FDU21_11775 PF07977 FabA-like domain FDU21_11780 PF01553 Acyltransferase FDU21_11790 PF00550 Phosphopantetheine attachment site FDU21_11850 PF01638 HxlR-like helix-turn-helix FDU21_11935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FDU21_11935 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FDU21_12025 PF07687 Peptidase dimerisation domain FDU21_12025 PF01546 Peptidase family M20/M25/M40 FDU21_12210 PF02091 Glycyl-tRNA synthetase alpha subunit FDU21_12235 PF00117 Glutamine amidotransferase class-I FDU21_12235 PF00958 GMP synthase C terminal domain FDU21_12245 PF00902 Sec-independent protein translocase protein (TatC) FDU21_12250 PF02416 mttA/Hcf106 family FDU21_12270 PF12697 Alpha/beta hydrolase family FDU21_12295 PF01171 PP-loop family FDU21_12325 PF13378 Enolase C-terminal domain-like FDU21_12325 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FDU21_12395 PF04616 Glycosyl hydrolases family 43 FDU21_12485 PF01047 MarR family FDU21_12575 PF01381 Helix-turn-helix FDU21_12580 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB FDU21_12590 PF13538 UvrD-like helicase C-terminal domain FDU21_12595 PF13538 UvrD-like helicase C-terminal domain FDU21_12650 PF00080 Copper/zinc superoxide dismutase (SODC) FDU21_12670 PF00909 Ammonium Transporter Family FDU21_12730 PF13091 PLD-like domain FDU21_12920 PF00248 Aldo/keto reductase family FDU21_13000 PF04226 Transglycosylase associated protein FDU21_13165 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FDU21_13260 PF01227 GTP cyclohydrolase I FDU21_13420 PF03741 Integral membrane protein TerC family FDU21_13445 PF10396 GTP-binding protein TrmE N-terminus FDU21_13445 PF12631 MnmE helical domain FDU21_13445 PF01926 50S ribosome-binding GTPase FDU21_13470 PF00468 Ribosomal protein L34 FDU21_13480 PF00308 Bacterial dnaA protein FDU21_13480 PF08299 Bacterial dnaA protein helix-turn-helix FDU21_13480 PF11638 DnaA N-terminal domain FDU21_13485 PF00712 DNA polymerase III beta subunit, N-terminal domain FDU21_13485 PF02768 DNA polymerase III beta subunit, C-terminal domain FDU21_13485 PF02767 DNA polymerase III beta subunit, central domain FDU21_13530 PF02472 Biopolymer transport protein ExbD/TolR FDU21_13535 PF02472 Biopolymer transport protein ExbD/TolR FDU21_13540 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FDU21_13610 PF12241 Trans-2-enoyl-CoA reductase catalytic region FDU21_13610 PF07055 Enoyl reductase FAD binding domain FDU21_13610 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FDU21_13765 PF08338 Domain of unknown function (DUF1731) FDU21_13765 PF01370 NAD dependent epimerase/dehydratase family FDU21_13770 PF00512 His Kinase A (phospho-acceptor) domain FDU21_13770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDU21_13770 PF08521 Two-component sensor kinase N-terminal FDU21_13880 PF01313 Bacterial export proteins, family 3 FDU21_14225 PF00005 ABC transporter FDU21_14300 PF00005 ABC transporter FDU21_14325 PF08845 Toxin SymE, type I toxin-antitoxin system FDU21_14345 PF03006 Haemolysin-III related FDU21_14490 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FDU21_14490 PF00128 Alpha amylase, catalytic domain FDU21_14490 PF02806 Alpha amylase, C-terminal all-beta domain FDU21_14615 PF17284 Spermidine synthase tetramerisation domain FDU21_14720 PF12697 Alpha/beta hydrolase family FDU21_14750 PF00265 Thymidine kinase FDU21_14780 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) FDU21_14865 PF01037 Lrp/AsnC ligand binding domain FDU21_14970 PF02810 SEC-C motif FDU21_15100 PF02405 Permease MlaE FDU21_15105 PF00005 ABC transporter FDU21_15195 PF13340 Putative transposase of IS4/5 family (DUF4096) FDU21_15290 PF00472 RF-1 domain FDU21_15300 PF00849 RNA pseudouridylate synthase FDU21_15405 PF08546 Ketopantoate reductase PanE/ApbA C terminal FDU21_15405 PF02558 Ketopantoate reductase PanE/ApbA FDU21_15445 PF01381 Helix-turn-helix FDU21_15525 PF00490 Delta-aminolevulinic acid dehydratase FDU21_15565 PF01488 Shikimate / quinate 5-dehydrogenase FDU21_15565 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FDU21_15565 PF08501 Shikimate dehydrogenase substrate binding domain FDU21_15595 PF13533 Biotin-lipoyl like FDU21_15630 PF01207 Dihydrouridine synthase (Dus) FDU21_15640 PF00486 Transcriptional regulatory protein, C terminal FDU21_15640 PF00072 Response regulator receiver domain FDU21_15670 PF08279 HTH domain FDU21_15670 PF03099 Biotin/lipoate A/B protein ligase family FDU21_15670 PF02237 Biotin protein ligase C terminal domain FDU21_15695 PF02223 Thymidylate kinase FDU21_15720 PF00491 Arginase family FDU21_15735 PF05532 CsbD-like FDU21_15800 PF04542 Sigma-70 region 2 FDU21_15800 PF08281 Sigma-70, region 4 FDU21_15970 PF00268 Ribonucleotide reductase, small chain FDU21_16000 PF02803 Thiolase, C-terminal domain FDU21_16000 PF00108 Thiolase, N-terminal domain FDU21_16025 PF12146 Serine aminopeptidase, S33 FDU21_16080 PF02441 Flavoprotein FDU21_16080 PF04127 DNA / pantothenate metabolism flavoprotein FDU21_16120 PF00535 Glycosyl transferase family 2 FDU21_16180 PF00579 tRNA synthetases class I (W and Y) FDU21_16245 PF01521 Iron-sulphur cluster biosynthesis FDU21_16260 PF03186 CobD/Cbib protein FDU21_16260 PF17113 Regulatory signalling modulator protein AmpE FDU21_16360 PF02954 Bacterial regulatory protein, Fis family FDU21_16375 PF01381 Helix-turn-helix FDU21_16435 PF01220 Dehydroquinase class II FDU21_16450 PF03091 CutA1 divalent ion tolerance protein FDU21_16540 PF01300 Telomere recombination FDU21_16575 PF01327 Polypeptide deformylase FDU21_16600 PF00535 Glycosyl transferase family 2 FDU21_16620 PF00925 GTP cyclohydrolase II FDU21_16635 PF03279 Bacterial lipid A biosynthesis acyltransferase FDU21_16725 PF03852 DNA mismatch endonuclease Vsr FDU21_17045 PF02469 Fasciclin domain FDU21_17075 PF00005 ABC transporter FDU21_17155 PF01037 Lrp/AsnC ligand binding domain FDU21_17260 PF00892 EamA-like transporter family FDU21_17335 PF00119 ATP synthase A chain FDU21_17340 PF00137 ATP synthase subunit C FDU21_17350 PF00213 ATP synthase delta (OSCP) subunit FDU21_17355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FDU21_17355 PF00306 ATP synthase alpha/beta chain, C terminal domain FDU21_17355 PF02874 ATP synthase alpha/beta family, beta-barrel domain FDU21_17360 PF00231 ATP synthase FDU21_17365 PF02874 ATP synthase alpha/beta family, beta-barrel domain FDU21_17365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FDU21_17370 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FDU21_17420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDU21_17470 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDU21_17505 PF00109 Beta-ketoacyl synthase, N-terminal domain FDU21_17505 PF02801 Beta-ketoacyl synthase, C-terminal domain FDU21_17525 PF13419 Haloacid dehalogenase-like hydrolase FDU21_17535 PF13185 GAF domain FDU21_17575 PF13417 Glutathione S-transferase, N-terminal domain FDU21_17690 PF16363 GDP-mannose 4,6 dehydratase FDU21_17700 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FDU21_17705 PF04321 RmlD substrate binding domain FDU21_17725 PF01144 Coenzyme A transferase FDU21_17735 PF05045 Rhamnan synthesis protein F FDU21_17735 PF14307 Glycosyltransferase WbsX FDU21_17765 PF02405 Permease MlaE FDU21_17780 PF03129 Anticodon binding domain FDU21_17780 PF04073 Aminoacyl-tRNA editing domain FDU21_17780 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FDU21_17790 PF01066 CDP-alcohol phosphatidyltransferase FDU21_17975 PF08334 Type II secretion system (T2SS), protein G FDU21_17985 PF07963 Prokaryotic N-terminal methylation motif FDU21_18060 PF00535 Glycosyl transferase family 2 FDU21_18090 PF09827 CRISPR associated protein Cas2 FDU21_18140 PF02620 Large ribosomal RNA subunit accumulation protein YceD FDU21_18145 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FDU21_18145 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FDU21_18155 PF00698 Acyl transferase domain FDU21_18165 PF00550 Phosphopantetheine attachment site FDU21_18175 PF00425 chorismate binding enzyme FDU21_18175 PF04715 Anthranilate synthase component I, N terminal region FDU21_18185 PF09115 DNA polymerase III, delta subunit, C terminal FDU21_18320 PF00072 Response regulator receiver domain FDU21_18325 PF01145 SPFH domain / Band 7 family FDU21_18325 PF12221 Bacterial membrane protein N terminal FDU21_18400 PF03279 Bacterial lipid A biosynthesis acyltransferase FDU21_18405 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FDU21_18410 PF02321 Outer membrane efflux protein FDU21_18440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDU21_18510 PF12833 Helix-turn-helix domain FDU21_18615 PF00056 lactate/malate dehydrogenase, NAD binding domain FDU21_18615 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FDU21_18620 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FDU21_18645 PF01474 Class-II DAHP synthetase family FDU21_18780 PF13340 Putative transposase of IS4/5 family (DUF4096) FDU21_18915 PF10431 C-terminal, D2-small domain, of ClpB protein FDU21_18915 PF07724 AAA domain (Cdc48 subfamily) FDU21_18915 PF06689 ClpX C4-type zinc finger FDU21_19105 PF01967 MoaC family FDU21_19110 PF02597 ThiS family FDU21_19115 PF02391 MoaE protein FDU21_19135 PF02575 YbaB/EbfC DNA-binding family FDU21_19335 PF03600 Citrate transporter FDU21_19380 PF03466 LysR substrate binding domain FDU21_19380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDU21_19400 PF00512 His Kinase A (phospho-acceptor) domain FDU21_19400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDU21_19455 PF00301 Rubredoxin FDU21_19470 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FDU21_19540 PF04055 Radical SAM superfamily FDU21_19540 PF06969 HemN C-terminal domain FDU21_19555 PF01138 3' exoribonuclease family, domain 1 FDU21_19555 PF03725 3' exoribonuclease family, domain 2 FDU21_19580 PF01192 RNA polymerase Rpb6 FDU21_19590 PF01042 Endoribonuclease L-PSP FDU21_19605 PF01197 Ribosomal protein L31 FDU21_19610 PF00285 Citrate synthase, C-terminal domain FDU21_19800 PF00005 ABC transporter FDU21_19800 PF03459 TOBE domain FDU21_19945 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FDU21_19945 PF00034 Cytochrome c FDU21_19975 PF00202 Aminotransferase class-III FDU21_20000 PF13333 Integrase core domain FDU21_20000 PF13276 HTH-like domain FDU21_20000 PF00665 Integrase core domain FDU21_20105 PF04012 PspA/IM30 family FDU21_20265 PF00381 PTS HPr component phosphorylation site FDU21_20285 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FDU21_20325 PF01722 BolA-like protein FDU21_20355 PF00551 Formyl transferase FDU21_20370 PF00586 AIR synthase related protein, N-terminal domain FDU21_20370 PF02769 AIR synthase related protein, C-terminal domain FDU21_20385 PF00308 Bacterial dnaA protein FDU21_20500 PF00886 Ribosomal protein S16 FDU21_20505 PF01782 RimM N-terminal domain FDU21_20505 PF05239 PRC-barrel domain FDU21_20510 PF01746 tRNA (Guanine-1)-methyltransferase FDU21_20515 PF01245 Ribosomal protein L19 FDU21_20555 PF01541 GIY-YIG catalytic domain FDU21_20630 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FDU21_20670 PF06276 Ferric iron reductase FhuF-like transporter FDU21_20670 PF04183 IucA / IucC family FDU21_20745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDU21_20745 PF03466 LysR substrate binding domain FDU21_20830 PF01810 LysE type translocator FDU21_20885 PF00355 Rieske [2Fe-2S] domain FDU21_20990 PF00437 Type II/IV secretion system protein FDU21_21020 PF00958 GMP synthase C terminal domain FDU21_21020 PF00117 Glutamine amidotransferase class-I FDU21_21020 PF03352 Methyladenine glycosylase FDU21_21020 PF13302 Acetyltransferase (GNAT) domain FDU21_21020 PF13673 Acetyltransferase (GNAT) domain FDU21_21030 PF02622 Uncharacterized ACR, COG1678 FDU21_21105 PF00348 Polyprenyl synthetase FDU21_21155 PF04328 Selenoprotein, putative FDU21_21165 PF05726 Pirin C-terminal cupin domain FDU21_21165 PF02678 Pirin FDU21_21340 PF03705 CheR methyltransferase, all-alpha domain FDU21_21340 PF01739 CheR methyltransferase, SAM binding domain FDU21_21385 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FDU21_21405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDU21_21405 PF00512 His Kinase A (phospho-acceptor) domain FDU21_21405 PF00672 HAMP domain FDU21_21515 PF01475 Ferric uptake regulator family FDU21_21615 PF03358 NADPH-dependent FMN reductase FDU21_21635 PF05736 OprF membrane domain FDU21_21635 PF00691 OmpA family FDU21_21685 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FDU21_21685 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FDU21_21950 PF00114 Pilin (bacterial filament) FDU21_21950 PF07963 Prokaryotic N-terminal methylation motif FDU21_22000 PF00549 CoA-ligase FDU21_22000 PF08442 ATP-grasp domain FDU21_22060 PF02358 Trehalose-phosphatase FDU21_22100 PF04376 Arginine-tRNA-protein transferase, N terminus FDU21_22100 PF04377 Arginine-tRNA-protein transferase, C terminus FDU21_22160 PF01926 50S ribosome-binding GTPase FDU21_22160 PF01018 GTP1/OBG FDU21_22210 PF00510 Cytochrome c oxidase subunit III FDU21_22215 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FDU21_22255 PF05593 RHS Repeat FDU21_22255 PF03527 RHS protein FDU21_22375 PF01709 Transcriptional regulator FDU21_22380 PF02075 Crossover junction endodeoxyribonuclease RuvC FDU21_22395 PF05496 Holliday junction DNA helicase RuvB P-loop domain FDU21_22395 PF17864 RuvB AAA lid domain FDU21_22395 PF05491 RuvB C-terminal winged helix domain FDU21_22410 PF02472 Biopolymer transport protein ExbD/TolR FDU21_22635 PF00182 Chitinase class I FDU21_22685 PF01555 DNA methylase FDU21_22760 PF00210 Ferritin-like domain FDU21_22800 PF05402 Coenzyme PQQ synthesis protein D (PqqD) FDU21_22810 PF12706 Beta-lactamase superfamily domain FDU21_22815 PF08042 PqqA family FDU21_22855 PF03747 ADP-ribosylglycohydrolase FDU21_22875 PF00072 Response regulator receiver domain FDU21_22885 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term FDU21_22885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDU21_23150 PF00293 NUDIX domain FDU21_23190 PF01597 Glycine cleavage H-protein FDU21_23330 PF04264 YceI-like domain FDU21_23340 PF04264 YceI-like domain FDU21_23430 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FDU21_23430 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FDU21_23480 PF01926 50S ribosome-binding GTPase FDU21_23480 PF07650 KH domain FDU21_23545 PF00313 'Cold-shock' DNA-binding domain FDU21_23580 PF04675 DNA ligase N terminus FDU21_23580 PF01068 ATP dependent DNA ligase domain FDU21_23580 PF04679 ATP dependent DNA ligase C terminal region FDU21_23615 PF03797 Autotransporter beta-domain FDU21_23615 PF12951 Passenger-associated-transport-repeat FDU21_23615 PF00082 Subtilase family FDU21_23620 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FDU21_23620 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FDU21_23635 PF01863 Protein of unknown function DUF45 FDU21_23640 PF07043 Protein of unknown function (DUF1328) FDU21_23650 PF01258 Prokaryotic dksA/traR C4-type zinc finger FDU21_23785 PF01042 Endoribonuclease L-PSP FDU21_23830 PF04545 Sigma-70, region 4 FDU21_23830 PF04542 Sigma-70 region 2 FDU21_23850 PF04060 Putative Fe-S cluster FDU21_23880 PF00324 Amino acid permease FDU21_23885 PF02574 Homocysteine S-methyltransferase FDU21_23930 PF00009 Elongation factor Tu GTP binding domain FDU21_24025 PF01351 Ribonuclease HII FDU21_24035 PF00132 Bacterial transferase hexapeptide (six repeats) FDU21_24035 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FDU21_24100 PF00318 Ribosomal protein S2 FDU21_24135 PF00557 Metallopeptidase family M24 FDU21_24190 PF00210 Ferritin-like domain FDU21_24225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDU21_24225 PF00529 HlyD membrane-fusion protein of T1SS FDU21_24300 PF01668 SmpB protein FDU21_24310 PF03658 RnfH family Ubiquitin FDU21_24405 PF01205 Uncharacterized protein family UPF0029 FDU21_24475 PF13340 Putative transposase of IS4/5 family (DUF4096) FDU21_24535 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDU21_24535 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FDU21_24695 PF00313 'Cold-shock' DNA-binding domain FDU21_24820 PF01609 Transposase DDE domain FDU21_24820 PF05598 Transposase domain (DUF772) FDU21_24825 PF02525 Flavodoxin-like fold FDU21_24990 PF03918 Cytochrome C biogenesis protein FDU21_25025 PF00005 ABC transporter FDU21_25030 PF00155 Aminotransferase class I and II FDU21_25070 PF03795 YCII-related domain FDU21_25160 PF00444 Ribosomal protein L36