locus-tag class description C0L89_00010 PF00308 Bacterial dnaA protein C0L89_00010 PF08299 Bacterial dnaA protein helix-turn-helix C0L89_00010 PF11638 DnaA N-terminal domain C0L89_00015 PF00712 DNA polymerase III beta subunit, N-terminal domain C0L89_00015 PF02767 DNA polymerase III beta subunit, central domain C0L89_00015 PF02768 DNA polymerase III beta subunit, C-terminal domain C0L89_00020 PF02463 RecF/RecN/SMC N terminal domain C0L89_00025 PF01751 Toprim domain C0L89_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_00025 PF18053 DNA gyrase B subunit insert domain C0L89_00025 PF00986 DNA gyrase B subunit, carboxyl terminus C0L89_00025 PF00204 DNA gyrase B C0L89_00035 PF01435 Peptidase family M48 C0L89_00045 PF03544 Gram-negative bacterial TonB protein C-terminal C0L89_00050 PF01618 MotA/TolQ/ExbB proton channel family C0L89_00055 PF02472 Biopolymer transport protein ExbD/TolR C0L89_00060 PF02472 Biopolymer transport protein ExbD/TolR C0L89_00065 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ C0L89_00090 PF05598 Transposase domain (DUF772) C0L89_00095 PF05598 Transposase domain (DUF772) C0L89_00095 PF01609 Transposase DDE domain C0L89_00100 PF04055 Radical SAM superfamily C0L89_00110 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) C0L89_00135 PF03572 Peptidase family S41 C0L89_00135 PF13180 PDZ domain C0L89_00140 PF01551 Peptidase family M23 C0L89_00150 PF04389 Peptidase family M28 C0L89_00160 PF00150 Cellulase (glycosyl hydrolase family 5) C0L89_00175 PF00150 Cellulase (glycosyl hydrolase family 5) C0L89_00185 PF00150 Cellulase (glycosyl hydrolase family 5) C0L89_00195 PF08240 Alcohol dehydrogenase GroES-like domain C0L89_00195 PF00107 Zinc-binding dehydrogenase C0L89_00225 PF07992 Pyridine nucleotide-disulphide oxidoreductase C0L89_00225 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C0L89_00230 PF04898 Glutamate synthase central domain C0L89_00230 PF01493 GXGXG motif C0L89_00230 PF00310 Glutamine amidotransferases class-II C0L89_00230 PF01645 Conserved region in glutamate synthase C0L89_00300 PF00270 DEAD/DEAH box helicase C0L89_00300 PF09369 Domain of unknown function (DUF1998) C0L89_00300 PF00271 Helicase conserved C-terminal domain C0L89_00305 PF03006 Haemolysin-III related C0L89_00335 PF00080 Copper/zinc superoxide dismutase (SODC) C0L89_00340 PF02954 Bacterial regulatory protein, Fis family C0L89_00340 PF00158 Sigma-54 interaction domain C0L89_00340 PF00072 Response regulator receiver domain C0L89_00345 PF00989 PAS fold C0L89_00345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_00345 PF00512 His Kinase A (phospho-acceptor) domain C0L89_00350 PF00909 Ammonium Transporter Family C0L89_00355 PF00543 Nitrogen regulatory protein P-II C0L89_00360 PF00120 Glutamine synthetase, catalytic domain C0L89_00360 PF03951 Glutamine synthetase, beta-Grasp domain C0L89_00365 PF02673 Bacitracin resistance protein BacA C0L89_00410 PF03061 Thioesterase superfamily C0L89_00415 PF13091 PLD-like domain C0L89_00430 PF10609 NUBPL iron-transfer P-loop NTPase C0L89_00430 PF01883 Iron-sulfur cluster assembly protein C0L89_00450 PF01381 Helix-turn-helix C0L89_00455 PF07804 HipA-like C-terminal domain C0L89_00455 PF13657 HipA N-terminal domain C0L89_00460 PF10017 Histidine-specific methyltransferase, SAM-dependent C0L89_00465 PF12867 DinB superfamily C0L89_00465 PF03781 Sulfatase-modifying factor enzyme 1 C0L89_00475 PF00528 Binding-protein-dependent transport system inner membrane component C0L89_00480 PF00005 ABC transporter C0L89_00480 PF00571 CBS domain C0L89_00495 PF00005 ABC transporter C0L89_00510 PF01734 Patatin-like phospholipase C0L89_00520 PF01037 Lrp/AsnC ligand binding domain C0L89_00525 PF00351 Biopterin-dependent aromatic amino acid hydroxylase C0L89_00555 PF00356 Bacterial regulatory proteins, lacI family C0L89_00590 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C0L89_00590 PF00128 Alpha amylase, catalytic domain C0L89_00590 PF02806 Alpha amylase, C-terminal all-beta domain C0L89_00595 PF16657 Maltogenic Amylase, C-terminal domain C0L89_00595 PF00128 Alpha amylase, catalytic domain C0L89_00600 PF11896 Domain of unknown function (DUF3416) C0L89_00600 PF00128 Alpha amylase, catalytic domain C0L89_00610 PF01609 Transposase DDE domain C0L89_00610 PF05598 Transposase domain (DUF772) C0L89_00620 PF02803 Thiolase, C-terminal domain C0L89_00620 PF00108 Thiolase, N-terminal domain C0L89_00660 PF00581 Rhodanese-like domain C0L89_00665 PF02556 Preprotein translocase subunit SecB C0L89_00670 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C0L89_00670 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C0L89_00680 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C0L89_00680 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C0L89_00680 PF00205 Thiamine pyrophosphate enzyme, central domain C0L89_00685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_00685 PF00512 His Kinase A (phospho-acceptor) domain C0L89_00690 PF02954 Bacterial regulatory protein, Fis family C0L89_00690 PF00072 Response regulator receiver domain C0L89_00690 PF00158 Sigma-54 interaction domain C0L89_00705 PF07690 Major Facilitator Superfamily C0L89_00710 PF01609 Transposase DDE domain C0L89_00710 PF05598 Transposase domain (DUF772) C0L89_00720 PF00588 SpoU rRNA Methylase family C0L89_00735 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C0L89_00735 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C0L89_00740 PF13784 Fic/DOC family N-terminal C0L89_00740 PF02661 Fic/DOC family C0L89_00745 PF00561 alpha/beta hydrolase fold C0L89_00755 PF03692 Putative zinc- or iron-chelating domain C0L89_00760 PF00501 AMP-binding enzyme C0L89_00765 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family C0L89_00780 PF07478 D-ala D-ala ligase C-terminus C0L89_00780 PF01820 D-ala D-ala ligase N-terminus C0L89_00795 PF03109 ABC1 family C0L89_00810 PF00849 RNA pseudouridylate synthase C0L89_00820 PF00472 RF-1 domain C0L89_00840 PF01432 Peptidase family M3 C0L89_00880 PF00326 Prolyl oligopeptidase family C0L89_00885 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C0L89_00885 PF00364 Biotin-requiring enzyme C0L89_00885 PF00289 Biotin carboxylase, N-terminal domain C0L89_00885 PF02785 Biotin carboxylase C-terminal domain C0L89_00895 PF01039 Carboxyl transferase domain C0L89_00900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C0L89_00900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C0L89_00900 PF02770 Acyl-CoA dehydrogenase, middle domain C0L89_00945 PF07683 Cobalamin synthesis protein cobW C-terminal domain C0L89_00945 PF02492 CobW/HypB/UreG, nucleotide-binding domain C0L89_00965 PF03969 AFG1-like ATPase C0L89_00970 PF01047 MarR family C0L89_00975 PF02566 OsmC-like protein C0L89_00995 PF03377 TAL effector repeat C0L89_01000 PF04717 Type VI secretion system, phage-baseplate injector C0L89_01000 PF16671 Actin cross-linking domain C0L89_01025 PF00248 Aldo/keto reductase family C0L89_01040 PF16884 N-terminal domain of oxidoreductase C0L89_01040 PF00107 Zinc-binding dehydrogenase C0L89_01055 PF00849 RNA pseudouridylate synthase C0L89_01070 PF08482 ATP-dependent helicase C-terminal C0L89_01070 PF04408 Helicase associated domain (HA2) C0L89_01070 PF00271 Helicase conserved C-terminal domain C0L89_01070 PF00270 DEAD/DEAH box helicase C0L89_01080 PF07308 Protein of unknown function (DUF1456) C0L89_01085 PF13454 FAD-NAD(P)-binding C0L89_01105 PF00266 Aminotransferase class-V C0L89_01110 PF01546 Peptidase family M20/M25/M40 C0L89_01110 PF07687 Peptidase dimerisation domain C0L89_01150 PF01609 Transposase DDE domain C0L89_01150 PF05598 Transposase domain (DUF772) C0L89_01195 PF01026 TatD related DNase C0L89_01215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L89_01215 PF03466 LysR substrate binding domain C0L89_01220 PF07690 Major Facilitator Superfamily C0L89_01230 PF02146 Sir2 family C0L89_01235 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C0L89_01240 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C0L89_01240 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C0L89_01260 PF00551 Formyl transferase C0L89_01265 PF00486 Transcriptional regulatory protein, C terminal C0L89_01265 PF00072 Response regulator receiver domain C0L89_01285 PF02677 Epoxyqueuosine reductase QueH C0L89_01290 PF03466 LysR substrate binding domain C0L89_01290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L89_01295 PF03358 NADPH-dependent FMN reductase C0L89_01305 PF08267 Cobalamin-independent synthase, N-terminal domain C0L89_01305 PF01717 Cobalamin-independent synthase, Catalytic domain C0L89_01310 PF03812 2-keto-3-deoxygluconate permease C0L89_01320 PF05368 NmrA-like family C0L89_01325 PF01638 HxlR-like helix-turn-helix C0L89_01360 PF01609 Transposase DDE domain C0L89_01360 PF05598 Transposase domain (DUF772) C0L89_01375 PF03377 TAL effector repeat C0L89_01380 PF04717 Type VI secretion system, phage-baseplate injector C0L89_01380 PF16671 Actin cross-linking domain C0L89_01385 PF13495 Phage integrase, N-terminal SAM-like domain C0L89_01385 PF00589 Phage integrase family C0L89_01390 PF05598 Transposase domain (DUF772) C0L89_01395 PF00920 Dehydratase family C0L89_01400 PF03692 Putative zinc- or iron-chelating domain C0L89_01405 PF00132 Bacterial transferase hexapeptide (six repeats) C0L89_01410 PF07690 Major Facilitator Superfamily C0L89_01415 PF11871 Domain of unknown function (DUF3391) C0L89_01415 PF01966 HD domain C0L89_01445 PF01494 FAD binding domain C0L89_01465 PF00111 2Fe-2S iron-sulfur cluster binding domain C0L89_01465 PF00175 Oxidoreductase NAD-binding domain C0L89_01470 PF00355 Rieske [2Fe-2S] domain C0L89_01475 PF01144 Coenzyme A transferase C0L89_01485 PF02803 Thiolase, C-terminal domain C0L89_01485 PF00108 Thiolase, N-terminal domain C0L89_01490 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal C0L89_01490 PF00775 Dioxygenase C0L89_01505 PF00206 Lyase C0L89_01505 PF10397 Adenylosuccinate lyase C-terminus C0L89_01510 PF12146 Serine aminopeptidase, S33 C0L89_01515 PF02627 Carboxymuconolactone decarboxylase family C0L89_01530 PF01614 Bacterial transcriptional regulator C0L89_01530 PF09339 IclR helix-turn-helix domain C0L89_01555 PF01134 Glucose inhibited division protein A C0L89_01555 PF13932 GidA associated domain C0L89_01570 PF00291 Pyridoxal-phosphate dependent enzyme C0L89_01590 PF13649 Methyltransferase domain C0L89_01600 PF12697 Alpha/beta hydrolase family C0L89_01610 PF00155 Aminotransferase class I and II C0L89_01615 PF06968 Biotin and Thiamin Synthesis associated domain C0L89_01615 PF04055 Radical SAM superfamily C0L89_01625 PF01040 UbiA prenyltransferase family C0L89_01645 PF05819 NolX protein C0L89_01705 PF01313 Bacterial export proteins, family 3 C0L89_01710 PF00813 FliP family C0L89_01725 PF00771 FHIPEP family C0L89_01730 PF01312 FlhB HrpN YscU SpaS Family C0L89_01745 PF01514 Secretory protein of YscJ/FliF family C0L89_01760 PF18269 T3SS EscN ATPase C-terminal domain C0L89_01760 PF02874 ATP synthase alpha/beta family, beta-barrel domain C0L89_01760 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C0L89_01770 PF01311 Bacterial export proteins, family 1 C0L89_01785 PF01464 Transglycosylase SLT domain C0L89_01805 PF12795 Mechanosensitive ion channel porin domain C0L89_01805 PF12794 Mechanosensitive ion channel inner membrane domain 1 C0L89_01805 PF00924 Mechanosensitive ion channel C0L89_01815 PF05598 Transposase domain (DUF772) C0L89_01815 PF01609 Transposase DDE domain C0L89_01820 PF03109 ABC1 family C0L89_01830 PF05661 Protein of unknown function (DUF808) C0L89_01840 PF00990 Diguanylate cyclase, GGDEF domain C0L89_01840 PF00072 Response regulator receiver domain C0L89_01845 PF00534 Glycosyl transferases group 1 C0L89_01845 PF08323 Starch synthase catalytic domain C0L89_01850 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C0L89_01850 PF02806 Alpha amylase, C-terminal all-beta domain C0L89_01850 PF00128 Alpha amylase, catalytic domain C0L89_01855 PF11941 Domain of unknown function (DUF3459) C0L89_01855 PF00128 Alpha amylase, catalytic domain C0L89_01855 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C0L89_01860 PF02446 4-alpha-glucanotransferase C0L89_01865 PF00128 Alpha amylase, catalytic domain C0L89_01875 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C0L89_01875 PF00128 Alpha amylase, catalytic domain C0L89_01880 PF13460 NAD(P)H-binding C0L89_01885 PF05598 Transposase domain (DUF772) C0L89_01905 PF06903 VirK protein C0L89_01920 PF00271 Helicase conserved C-terminal domain C0L89_01920 PF00270 DEAD/DEAH box helicase C0L89_01930 PF05598 Transposase domain (DUF772) C0L89_01930 PF01609 Transposase DDE domain C0L89_01945 PF02817 e3 binding domain C0L89_01945 PF00364 Biotin-requiring enzyme C0L89_01945 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C0L89_01955 PF02780 Transketolase, C-terminal domain C0L89_01955 PF02779 Transketolase, pyrimidine binding domain C0L89_01960 PF00676 Dehydrogenase E1 component C0L89_01970 PF03301 Tryptophan 2,3-dioxygenase C0L89_01975 PF00854 POT family C0L89_01985 PF01047 MarR family C0L89_01990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C0L89_01995 PF04209 homogentisate 1,2-dioxygenase C0L89_02005 PF03334 Na+/H+ antiporter subunit C0L89_02010 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) C0L89_02020 PF00361 Proton-conducting membrane transporter C0L89_02025 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C0L89_02030 PF13244 Domain of unknown function (DUF4040) C0L89_02030 PF00361 Proton-conducting membrane transporter C0L89_02030 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter C0L89_02030 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C0L89_02060 PF01259 SAICAR synthetase C0L89_02065 PF05099 Tellurite resistance protein TerB C0L89_02065 PF00226 DnaJ domain C0L89_02070 PF00834 Ribulose-phosphate 3 epimerase family C0L89_02075 PF00583 Acetyltransferase (GNAT) family C0L89_02080 PF00781 Diacylglycerol kinase catalytic domain C0L89_02085 PF04715 Anthranilate synthase component I, N terminal region C0L89_02085 PF00425 chorismate binding enzyme C0L89_02100 PF00117 Glutamine amidotransferase class-I C0L89_02115 PF00591 Glycosyl transferase family, a/b domain C0L89_02115 PF02885 Glycosyl transferase family, helical bundle domain C0L89_02120 PF00218 Indole-3-glycerol phosphate synthase C0L89_02130 PF00325 Bacterial regulatory proteins, crp family C0L89_02130 PF00027 Cyclic nucleotide-binding domain C0L89_02135 PF02675 S-adenosylmethionine decarboxylase C0L89_02140 PF00893 Small Multidrug Resistance protein C0L89_02145 PF03232 Ubiquinone biosynthesis protein COQ7 C0L89_02150 PF00572 Ribosomal protein L13 C0L89_02155 PF00380 Ribosomal protein S9/S16 C0L89_02170 PF00293 NUDIX domain C0L89_02175 PF04324 BFD-like [2Fe-2S] binding domain C0L89_02180 PF00210 Ferritin-like domain C0L89_02185 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C0L89_02185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_02185 PF01627 Hpt domain C0L89_02185 PF00072 Response regulator receiver domain C0L89_02185 PF00672 HAMP domain C0L89_02185 PF00512 His Kinase A (phospho-acceptor) domain C0L89_02190 PF03707 Bacterial signalling protein N terminal repeat C0L89_02190 PF00990 Diguanylate cyclase, GGDEF domain C0L89_02190 PF00563 EAL domain C0L89_02210 PF01521 Iron-sulphur cluster biosynthesis C0L89_02220 PF09297 NADH pyrophosphatase zinc ribbon domain C0L89_02220 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain C0L89_02220 PF00293 NUDIX domain C0L89_02225 PF03186 CobD/Cbib protein C0L89_02225 PF17113 Regulatory signalling modulator protein AmpE C0L89_02245 PF07690 Major Facilitator Superfamily C0L89_02255 PF07690 Major Facilitator Superfamily C0L89_02260 PF12805 FUSC-like inner membrane protein yccS C0L89_02270 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C0L89_02270 PF02843 Phosphoribosylglycinamide synthetase, C domain C0L89_02270 PF02844 Phosphoribosylglycinamide synthetase, N domain C0L89_02280 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system C0L89_02285 PF01808 AICARFT/IMPCHase bienzyme C0L89_02285 PF02142 MGS-like domain C0L89_02290 PF01066 CDP-alcohol phosphatidyltransferase C0L89_02300 PF02954 Bacterial regulatory protein, Fis family C0L89_02315 PF01381 Helix-turn-helix C0L89_02355 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C0L89_02355 PF00289 Biotin carboxylase, N-terminal domain C0L89_02355 PF02785 Biotin carboxylase C-terminal domain C0L89_02365 PF00364 Biotin-requiring enzyme C0L89_02370 PF01220 Dehydroquinase class II C0L89_02380 PF02683 Cytochrome C biogenesis protein transmembrane region C0L89_02380 PF11412 Disulphide bond corrector protein DsbC C0L89_02385 PF03091 CutA1 divalent ion tolerance protein C0L89_02405 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C0L89_02405 PF18074 Primosomal protein N C-terminal domain C0L89_02405 PF17764 3′ DNA-binding domain (3′BD) C0L89_02405 PF00271 Helicase conserved C-terminal domain C0L89_02405 PF00270 DEAD/DEAH box helicase C0L89_02425 PF01554 MatE C0L89_02430 PF01343 Peptidase family S49 C0L89_02455 PF01300 Telomere recombination C0L89_02460 PF01131 DNA topoisomerase C0L89_02460 PF01751 Toprim domain C0L89_02460 PF13368 Topoisomerase C-terminal repeat C0L89_02475 PF04361 Protein of unknown function (DUF494) C0L89_02480 PF17782 DprA winged helix domain C0L89_02480 PF02481 DNA recombination-mediator protein A C0L89_02485 PF01476 LysM domain C0L89_02490 PF01327 Polypeptide deformylase C0L89_02495 PF00551 Formyl transferase C0L89_02495 PF02911 Formyl transferase, C-terminal domain C0L89_02500 PF01029 NusB family C0L89_02500 PF01189 16S rRNA methyltransferase RsmB/F C0L89_02515 PF00535 Glycosyl transferase family 2 C0L89_02535 PF00925 GTP cyclohydrolase II C0L89_02550 PF03279 Bacterial lipid A biosynthesis acyltransferase C0L89_02555 PF02580 D-Tyr-tRNA(Tyr) deacylase C0L89_02560 PF04542 Sigma-70 region 2 C0L89_02560 PF04546 Sigma-70, non-essential region C0L89_02560 PF03979 Sigma-70 factor, region 1.1 C0L89_02560 PF00140 Sigma-70 factor, region 1.2 C0L89_02560 PF04539 Sigma-70 region 3 C0L89_02560 PF04545 Sigma-70, region 4 C0L89_02730 PF00182 Chitinase class I C0L89_02785 PF01555 DNA methylase C0L89_02800 PF16671 Actin cross-linking domain C0L89_02800 PF04717 Type VI secretion system, phage-baseplate injector C0L89_02825 PF05598 Transposase domain (DUF772) C0L89_02855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C0L89_02855 PF07498 Rho termination factor, N-terminal domain C0L89_02855 PF07497 Rho termination factor, RNA-binding domain C0L89_02860 PF00085 Thioredoxin C0L89_02865 PF00270 DEAD/DEAH box helicase C0L89_02865 PF00271 Helicase conserved C-terminal domain C0L89_02865 PF12300 ATP-dependent RNA helicase RhlB C0L89_02870 PF00005 ABC transporter C0L89_02875 PF18075 FtsX extracellular domain C0L89_02880 PF00072 Response regulator receiver domain C0L89_02885 PF03167 Uracil DNA glycosylase superfamily C0L89_02890 PF04542 Sigma-70 region 2 C0L89_02890 PF04545 Sigma-70, region 4 C0L89_02895 PF03458 UPF0126 domain C0L89_02900 PF07992 Pyridine nucleotide-disulphide oxidoreductase C0L89_02920 PF00166 Chaperonin 10 Kd subunit C0L89_02925 PF00118 TCP-1/cpn60 chaperonin family C0L89_02940 PF05598 Transposase domain (DUF772) C0L89_02940 PF01609 Transposase DDE domain C0L89_02955 PF00793 DAHP synthetase I family C0L89_02980 PF08335 GlnD PII-uridylyltransferase C0L89_02980 PF03710 Glutamate-ammonia ligase adenylyltransferase C0L89_02985 PF02592 Putative vitamin uptake transporter C0L89_03015 PF00881 Nitroreductase family C0L89_03020 PF04264 YceI-like domain C0L89_03045 PF00456 Transketolase, thiamine diphosphate binding domain C0L89_03045 PF17831 Pyruvate dehydrogenase E1 component middle domain C0L89_03055 PF05598 Transposase domain (DUF772) C0L89_03075 PF04717 Type VI secretion system, phage-baseplate injector C0L89_03075 PF16671 Actin cross-linking domain C0L89_03100 PF05598 Transposase domain (DUF772) C0L89_03120 PF03377 TAL effector repeat C0L89_03130 PF00106 short chain dehydrogenase C0L89_03170 PF07759 Protein of unknown function (DUF1615) C0L89_03185 PF00892 EamA-like transporter family C0L89_03190 PF03330 Lytic transglycolase C0L89_03195 PF00041 Fibronectin type III domain C0L89_03195 PF00553 Cellulose binding domain C0L89_03195 PF01341 Glycosyl hydrolases family 6 C0L89_03205 PF00324 Amino acid permease C0L89_03215 PF01544 CorA-like Mg2+ transporter protein C0L89_03245 PF05598 Transposase domain (DUF772) C0L89_03255 PF01204 Trehalase C0L89_03290 PF00990 Diguanylate cyclase, GGDEF domain C0L89_03290 PF13188 PAS domain C0L89_03290 PF03707 Bacterial signalling protein N terminal repeat C0L89_03290 PF00563 EAL domain C0L89_03315 PF00553 Cellulose binding domain C0L89_03315 PF00150 Cellulase (glycosyl hydrolase family 5) C0L89_03320 PF00916 Sulfate permease family C0L89_03320 PF01740 STAS domain C0L89_03325 PF08448 PAS fold C0L89_03325 PF00990 Diguanylate cyclase, GGDEF domain C0L89_03345 PF13632 Glycosyl transferase family group 2 C0L89_03355 PF06580 Histidine kinase C0L89_03355 PF07694 5TMR of 5TMR-LYT C0L89_03360 PF04397 LytTr DNA-binding domain C0L89_03360 PF00072 Response regulator receiver domain C0L89_03365 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C0L89_03365 PF03900 Porphobilinogen deaminase, C-terminal domain C0L89_03390 PF00326 Prolyl oligopeptidase family C0L89_03390 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C0L89_03400 PF00155 Aminotransferase class I and II C0L89_03405 PF00326 Prolyl oligopeptidase family C0L89_03405 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C0L89_03410 PF04304 Protein of unknown function (DUF454) C0L89_03420 PF01678 Diaminopimelate epimerase C0L89_03430 PF02899 Phage integrase, N-terminal SAM-like domain C0L89_03430 PF00589 Phage integrase family C0L89_03440 PF00227 Proteasome subunit C0L89_03445 PF00004 ATPase family associated with various cellular activities (AAA) C0L89_03445 PF10431 C-terminal, D2-small domain, of ClpB protein C0L89_03445 PF07724 AAA domain (Cdc48 subfamily) C0L89_03455 PF13673 Acetyltransferase (GNAT) domain C0L89_03470 PF01209 ubiE/COQ5 methyltransferase family C0L89_03475 PF00990 Diguanylate cyclase, GGDEF domain C0L89_03475 PF03707 Bacterial signalling protein N terminal repeat C0L89_03475 PF00563 EAL domain C0L89_03480 PF01433 Peptidase family M1 domain C0L89_03480 PF11838 ERAP1-like C-terminal domain C0L89_03495 PF00294 pfkB family carbohydrate kinase C0L89_03505 PF04085 rod shape-determining protein MreC C0L89_03515 PF00905 Penicillin binding protein transpeptidase domain C0L89_03515 PF03717 Penicillin-binding Protein dimerisation domain C0L89_03520 PF01098 Cell cycle protein C0L89_03540 PF00295 Glycosyl hydrolases family 28 C0L89_03545 PF13406 Transglycosylase SLT domain C0L89_03550 PF05036 Sporulation related domain C0L89_03550 PF03330 Lytic transglycolase C0L89_03555 PF00768 D-alanyl-D-alanine carboxypeptidase C0L89_03555 PF07943 Penicillin-binding protein 5, C-terminal domain C0L89_03570 PF04359 Protein of unknown function (DUF493) C0L89_03575 PF03099 Biotin/lipoate A/B protein ligase family C0L89_03580 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family C0L89_03580 PF04055 Radical SAM superfamily C0L89_03585 PF17804 Tail specific protease N-terminal domain C0L89_03585 PF11818 C-terminal domain of tail specific protease (DUF3340) C0L89_03585 PF00595 PDZ domain C0L89_03585 PF03572 Peptidase family S41 C0L89_03595 PF00293 NUDIX domain C0L89_03595 PF01467 Cytidylyltransferase-like C0L89_03630 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C0L89_03630 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain C0L89_03635 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C0L89_03635 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C0L89_03640 PF04972 BON domain C0L89_03645 PF00360 Phytochrome region C0L89_03645 PF00512 His Kinase A (phospho-acceptor) domain C0L89_03645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_03645 PF01590 GAF domain C0L89_03645 PF08446 PAS fold C0L89_03650 PF00072 Response regulator receiver domain C0L89_03655 PF00512 His Kinase A (phospho-acceptor) domain C0L89_03655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_03660 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C0L89_03685 PF05598 Transposase domain (DUF772) C0L89_03685 PF01609 Transposase DDE domain C0L89_03700 PF02837 Glycosyl hydrolases family 2, sugar binding domain C0L89_03700 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C0L89_03700 PF00703 Glycosyl hydrolases family 2 C0L89_03700 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 C0L89_03700 PF16355 Domain of unknown function (DUF4982) C0L89_03720 PF07690 Major Facilitator Superfamily C0L89_03725 PF00356 Bacterial regulatory proteins, lacI family C0L89_03730 PF01380 SIS domain C0L89_03735 PF01979 Amidohydrolase family C0L89_03750 PF00535 Glycosyl transferase family 2 C0L89_03755 PF01522 Polysaccharide deacetylase C0L89_03755 PF14883 Hypothetical glycosyl hydrolase family 13 C0L89_03770 PF12627 Probable RNA and SrmB- binding site of polymerase A C0L89_03770 PF01743 Poly A polymerase head domain C0L89_03770 PF01966 HD domain C0L89_03775 PF01609 Transposase DDE domain C0L89_03775 PF05598 Transposase domain (DUF772) C0L89_03815 PF00034 Cytochrome c C0L89_03820 PF01926 50S ribosome-binding GTPase C0L89_03830 PF04107 Glutamate-cysteine ligase family 2(GCS2) C0L89_03860 PF00512 His Kinase A (phospho-acceptor) domain C0L89_03860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_03860 PF00672 HAMP domain C0L89_03860 PF16527 Two-component sensor protein CpxA, periplasmic domain C0L89_03865 PF00072 Response regulator receiver domain C0L89_03865 PF00486 Transcriptional regulatory protein, C terminal C0L89_03880 PF02583 Metal-sensitive transcriptional repressor C0L89_03885 PF00107 Zinc-binding dehydrogenase C0L89_03885 PF08240 Alcohol dehydrogenase GroES-like domain C0L89_03890 PF04828 Glutathione-dependent formaldehyde-activating enzyme C0L89_03895 PF00756 Putative esterase C0L89_03905 PF01609 Transposase DDE domain C0L89_03905 PF05598 Transposase domain (DUF772) C0L89_03920 PF12848 ABC transporter C0L89_03920 PF00005 ABC transporter C0L89_03940 PF00464 Serine hydroxymethyltransferase C0L89_03950 PF03477 ATP cone domain C0L89_03960 PF01872 RibD C-terminal domain C0L89_03960 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C0L89_03970 PF00677 Lumazine binding domain C0L89_03975 PF00925 GTP cyclohydrolase II C0L89_03975 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C0L89_03980 PF00885 6,7-dimethyl-8-ribityllumazine synthase C0L89_03985 PF01029 NusB family C0L89_03990 PF00586 AIR synthase related protein, N-terminal domain C0L89_03990 PF02769 AIR synthase related protein, C-terminal domain C0L89_04015 PF03814 Potassium-transporting ATPase A subunit C0L89_04025 PF02669 K+-transporting ATPase, c chain C0L89_04030 PF02702 Osmosensitive K+ channel His kinase sensor domain C0L89_04030 PF13492 GAF domain C0L89_04030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_04030 PF00512 His Kinase A (phospho-acceptor) domain C0L89_04030 PF13493 Domain of unknown function (DUF4118) C0L89_04035 PF00486 Transcriptional regulatory protein, C terminal C0L89_04035 PF00072 Response regulator receiver domain C0L89_04065 PF01565 FAD binding domain C0L89_04065 PF02913 FAD linked oxidases, C-terminal domain C0L89_04075 PF02021 Uncharacterised protein family UPF0102 C0L89_04085 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C0L89_04110 PF02381 MraZ protein, putative antitoxin-like C0L89_04115 PF01795 MraW methylase family C0L89_04120 PF04999 Cell division protein FtsL C0L89_04125 PF03717 Penicillin-binding Protein dimerisation domain C0L89_04125 PF00905 Penicillin binding protein transpeptidase domain C0L89_04130 PF08245 Mur ligase middle domain C0L89_04130 PF01225 Mur ligase family, catalytic domain C0L89_04130 PF02875 Mur ligase family, glutamate ligase domain C0L89_04135 PF08245 Mur ligase middle domain C0L89_04135 PF02875 Mur ligase family, glutamate ligase domain C0L89_04135 PF01225 Mur ligase family, catalytic domain C0L89_04140 PF00953 Glycosyl transferase family 4 C0L89_04145 PF01098 Cell cycle protein C0L89_04150 PF03033 Glycosyltransferase family 28 N-terminal domain C0L89_04150 PF04101 Glycosyltransferase family 28 C-terminal domain C0L89_04155 PF08245 Mur ligase middle domain C0L89_04155 PF01225 Mur ligase family, catalytic domain C0L89_04155 PF02875 Mur ligase family, glutamate ligase domain C0L89_04160 PF07478 D-ala D-ala ligase C-terminus C0L89_04160 PF01820 D-ala D-ala ligase N-terminus C0L89_04165 PF03799 Cell division protein FtsQ C0L89_04165 PF08478 POTRA domain, FtsQ-type C0L89_04170 PF02491 SHS2 domain inserted in FTSA C0L89_04175 PF00091 Tubulin/FtsZ family, GTPase domain C0L89_04175 PF12327 FtsZ family, C-terminal domain C0L89_04180 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C0L89_04190 PF01464 Transglycosylase SLT domain C0L89_04190 PF01551 Peptidase family M23 C0L89_04190 PF10145 Phage-related minor tail protein C0L89_04195 PF02810 SEC-C motif C0L89_04195 PF07516 SecA Wing and Scaffold domain C0L89_04195 PF01043 SecA preprotein cross-linking domain C0L89_04195 PF07517 SecA DEAD-like domain C0L89_04205 PF00293 NUDIX domain C0L89_04220 PF02219 Methylenetetrahydrofolate reductase C0L89_04235 PF00698 Acyl transferase domain C0L89_04235 PF08240 Alcohol dehydrogenase GroES-like domain C0L89_04235 PF16197 Ketoacyl-synthetase C-terminal extension C0L89_04235 PF00109 Beta-ketoacyl synthase, N-terminal domain C0L89_04235 PF02801 Beta-ketoacyl synthase, C-terminal domain C0L89_04235 PF08659 KR domain C0L89_04235 PF00550 Phosphopantetheine attachment site C0L89_04235 PF14765 Polyketide synthase dehydratase C0L89_04235 PF00107 Zinc-binding dehydrogenase C0L89_04240 PF09286 Pro-kumamolisin, activation domain C0L89_04240 PF00082 Subtilase family C0L89_04260 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C0L89_04295 PF13649 Methyltransferase domain C0L89_04300 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C0L89_04300 PF05221 S-adenosyl-L-homocysteine hydrolase C0L89_04310 PF00311 Phosphoenolpyruvate carboxylase C0L89_04340 PF00665 Integrase core domain C0L89_04340 PF13936 Helix-turn-helix domain C0L89_04360 PF00328 Histidine phosphatase superfamily (branch 2) C0L89_04365 PF00438 S-adenosylmethionine synthetase, N-terminal domain C0L89_04365 PF02772 S-adenosylmethionine synthetase, central domain C0L89_04365 PF02773 S-adenosylmethionine synthetase, C-terminal domain C0L89_04380 PF01207 Dihydrouridine synthase (Dus) C0L89_04390 PF00294 pfkB family carbohydrate kinase C0L89_04395 PF07662 Na+ dependent nucleoside transporter C-terminus C0L89_04395 PF01773 Na+ dependent nucleoside transporter N-terminus C0L89_04395 PF07670 Nucleoside recognition C0L89_04405 PF00248 Aldo/keto reductase family C0L89_04435 PF00005 ABC transporter C0L89_04445 PF02668 Taurine catabolism dioxygenase TauD, TfdA family C0L89_04455 PF00005 ABC transporter C0L89_04460 PF13472 GDSL-like Lipase/Acylhydrolase family C0L89_04465 PF00486 Transcriptional regulatory protein, C terminal C0L89_04465 PF00072 Response regulator receiver domain C0L89_04470 PF08521 Two-component sensor kinase N-terminal C0L89_04470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_04470 PF00512 His Kinase A (phospho-acceptor) domain C0L89_04485 PF01219 Prokaryotic diacylglycerol kinase C0L89_04505 PF01790 Prolipoprotein diacylglyceryl transferase C0L89_04510 PF00303 Thymidylate synthase C0L89_04520 PF00186 Dihydrofolate reductase C0L89_04525 PF00149 Calcineurin-like phosphoesterase C0L89_04530 PF04379 ApaG domain C0L89_04535 PF00398 Ribosomal RNA adenine dimethylase C0L89_04540 PF05598 Transposase domain (DUF772) C0L89_04550 PF04166 Pyridoxal phosphate biosynthetic protein PdxA C0L89_04555 PF00639 PPIC-type PPIASE domain C0L89_04555 PF09312 SurA N-terminal domain C0L89_04560 PF03968 OstA-like protein C0L89_04560 PF04453 LPS transport system D C0L89_04565 PF00850 Histone deacetylase domain C0L89_04570 PF01923 Cobalamin adenosyltransferase C0L89_04585 PF01494 FAD binding domain C0L89_04590 PF01494 FAD binding domain C0L89_04610 PF00392 Bacterial regulatory proteins, gntR family C0L89_04610 PF07729 FCD domain C0L89_04615 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C0L89_04620 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C0L89_04620 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit C0L89_04625 PF03466 LysR substrate binding domain C0L89_04625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L89_04630 PF00501 AMP-binding enzyme C0L89_04630 PF13193 AMP-binding enzyme C-terminal domain C0L89_04635 PF00171 Aldehyde dehydrogenase family C0L89_04640 PF00378 Enoyl-CoA hydratase/isomerase C0L89_04660 PF08450 SMP-30/Gluconolactonase/LRE-like region C0L89_04665 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C0L89_04665 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C0L89_04670 PF18125 RlmM ferredoxin-like domain C0L89_04670 PF01728 FtsJ-like methyltransferase C0L89_04700 PF00749 tRNA synthetases class I (E and Q), catalytic domain C0L89_04700 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain C0L89_04710 PF00072 Response regulator receiver domain C0L89_04710 PF00196 Bacterial regulatory proteins, luxR family C0L89_04720 PF01625 Peptide methionine sulfoxide reductase C0L89_04725 PF00923 Transaldolase/Fructose-6-phosphate aldolase C0L89_04730 PF01272 Transcription elongation factor, GreA/GreB, C-term C0L89_04730 PF03449 Transcription elongation factor, N-terminal C0L89_04740 PF03466 LysR substrate binding domain C0L89_04740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L89_04745 PF13192 Thioredoxin domain C0L89_04745 PF07992 Pyridine nucleotide-disulphide oxidoreductase C0L89_04750 PF00578 AhpC/TSA family C0L89_04750 PF10417 C-terminal domain of 1-Cys peroxiredoxin C0L89_04755 PF17827 PrmC N-terminal domain C0L89_04755 PF05175 Methyltransferase small domain C0L89_04780 PF00561 alpha/beta hydrolase fold C0L89_04790 PF00293 NUDIX domain C0L89_04795 PF01612 3'-5' exonuclease C0L89_04795 PF01367 5'-3' exonuclease, C-terminal SAM fold C0L89_04795 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C0L89_04795 PF00476 DNA polymerase family A C0L89_04810 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C0L89_04810 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch C0L89_04810 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C0L89_04835 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch C0L89_04840 PF02233 NAD(P) transhydrogenase beta subunit C0L89_04865 PF01063 Amino-transferase class IV C0L89_04875 PF04073 Aminoacyl-tRNA editing domain C0L89_04885 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain C0L89_04885 PF17189 Glycosyl hydrolase family 30 beta sandwich domain C0L89_04900 PF03358 NADPH-dependent FMN reductase C0L89_04905 PF03631 Virulence factor BrkB C0L89_04910 PF08534 Redoxin C0L89_04915 PF00708 Acylphosphatase C0L89_04925 PF03976 Polyphosphate kinase 2 (PPK2) C0L89_04930 PF00994 Probable molybdopterin binding domain C0L89_04940 PF03462 PCRF domain C0L89_04940 PF00472 RF-1 domain C0L89_04945 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain C0L89_04945 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C0L89_04945 PF01488 Shikimate / quinate 5-dehydrogenase C0L89_04955 PF03550 Outer membrane lipoprotein LolB C0L89_04960 PF08544 GHMP kinases C terminal C0L89_04960 PF00288 GHMP kinases N terminal domain C0L89_04970 PF14572 Phosphoribosyl synthetase-associated domain C0L89_04970 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C0L89_04975 PF14693 Ribosomal protein TL5, C-terminal domain C0L89_04975 PF01386 Ribosomal L25p family C0L89_04980 PF01195 Peptidyl-tRNA hydrolase C0L89_04985 PF06071 Protein of unknown function (DUF933) C0L89_04985 PF01926 50S ribosome-binding GTPase C0L89_05005 PF00009 Elongation factor Tu GTP binding domain C0L89_05005 PF03144 Elongation factor Tu domain 2 C0L89_05005 PF03143 Elongation factor Tu C-terminal domain C0L89_05015 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C0L89_05020 PF02357 Transcription termination factor nusG C0L89_05020 PF00467 KOW motif C0L89_05030 PF00298 Ribosomal protein L11, RNA binding domain C0L89_05030 PF03946 Ribosomal protein L11, N-terminal domain C0L89_05035 PF00687 Ribosomal protein L1p/L10e family C0L89_05040 PF00466 Ribosomal protein L10 C0L89_05045 PF00542 Ribosomal protein L7/L12 C-terminal domain C0L89_05045 PF16320 Ribosomal protein L7/L12 dimerisation domain C0L89_05050 PF00562 RNA polymerase Rpb2, domain 6 C0L89_05050 PF04560 RNA polymerase Rpb2, domain 7 C0L89_05050 PF10385 RNA polymerase beta subunit external 1 domain C0L89_05050 PF04565 RNA polymerase Rpb2, domain 3 C0L89_05050 PF04563 RNA polymerase beta subunit C0L89_05050 PF04561 RNA polymerase Rpb2, domain 2 C0L89_05055 PF04998 RNA polymerase Rpb1, domain 5 C0L89_05055 PF04983 RNA polymerase Rpb1, domain 3 C0L89_05055 PF00623 RNA polymerase Rpb1, domain 2 C0L89_05055 PF04997 RNA polymerase Rpb1, domain 1 C0L89_05055 PF05000 RNA polymerase Rpb1, domain 4 C0L89_05060 PF00164 Ribosomal protein S12/S23 C0L89_05065 PF00177 Ribosomal protein S7p/S5e C0L89_05070 PF00679 Elongation factor G C-terminus C0L89_05070 PF03764 Elongation factor G, domain IV C0L89_05070 PF00009 Elongation factor Tu GTP binding domain C0L89_05070 PF14492 Elongation Factor G, domain II C0L89_05070 PF03144 Elongation factor Tu domain 2 C0L89_05075 PF03144 Elongation factor Tu domain 2 C0L89_05075 PF03143 Elongation factor Tu C-terminal domain C0L89_05075 PF00009 Elongation factor Tu GTP binding domain C0L89_05090 PF00338 Ribosomal protein S10p/S20e C0L89_05095 PF00297 Ribosomal protein L3 C0L89_05100 PF00573 Ribosomal protein L4/L1 family C0L89_05105 PF00276 Ribosomal protein L23 C0L89_05110 PF03947 Ribosomal Proteins L2, C-terminal domain C0L89_05110 PF00181 Ribosomal Proteins L2, RNA binding domain C0L89_05115 PF00203 Ribosomal protein S19 C0L89_05120 PF00237 Ribosomal protein L22p/L17e C0L89_05125 PF00189 Ribosomal protein S3, C-terminal domain C0L89_05125 PF07650 KH domain C0L89_05130 PF00252 Ribosomal protein L16p/L10e C0L89_05135 PF00831 Ribosomal L29 protein C0L89_05140 PF00366 Ribosomal protein S17 C0L89_05145 PF00238 Ribosomal protein L14p/L23e C0L89_05150 PF00467 KOW motif C0L89_05150 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C0L89_05155 PF00281 Ribosomal protein L5 C0L89_05155 PF00673 ribosomal L5P family C-terminus C0L89_05160 PF00253 Ribosomal protein S14p/S29e C0L89_05165 PF00410 Ribosomal protein S8 C0L89_05170 PF00347 Ribosomal protein L6 C0L89_05175 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C0L89_05180 PF00333 Ribosomal protein S5, N-terminal domain C0L89_05180 PF03719 Ribosomal protein S5, C-terminal domain C0L89_05185 PF00327 Ribosomal protein L30p/L7e C0L89_05190 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C0L89_05195 PF00344 SecY translocase C0L89_05200 PF00416 Ribosomal protein S13/S18 C0L89_05205 PF00411 Ribosomal protein S11 C0L89_05210 PF01479 S4 domain C0L89_05210 PF00163 Ribosomal protein S4/S9 N-terminal domain C0L89_05215 PF01000 RNA polymerase Rpb3/RpoA insert domain C0L89_05215 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C0L89_05215 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C0L89_05220 PF01196 Ribosomal protein L17 C0L89_05225 PF02600 Disulfide bond formation protein DsbB C0L89_05235 PF01474 Class-II DAHP synthetase family C0L89_05260 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C0L89_05265 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C0L89_05265 PF00056 lactate/malate dehydrogenase, NAD binding domain C0L89_05270 PF00043 Glutathione S-transferase, C-terminal domain C0L89_05270 PF02798 Glutathione S-transferase, N-terminal domain C0L89_05300 PF01609 Transposase DDE domain C0L89_05300 PF05598 Transposase domain (DUF772) C0L89_05320 PF07992 Pyridine nucleotide-disulphide oxidoreductase C0L89_05320 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C0L89_05325 PF00107 Zinc-binding dehydrogenase C0L89_05325 PF08240 Alcohol dehydrogenase GroES-like domain C0L89_05335 PF05736 OprF membrane domain C0L89_05335 PF00691 OmpA family C0L89_05345 PF00849 RNA pseudouridylate synthase C0L89_05355 PF00155 Aminotransferase class I and II C0L89_05365 PF00528 Binding-protein-dependent transport system inner membrane component C0L89_05370 PF00528 Binding-protein-dependent transport system inner membrane component C0L89_05375 PF17850 CysA C-terminal regulatory domain C0L89_05375 PF12857 TOBE-like domain C0L89_05375 PF00005 ABC transporter C0L89_05385 PF00107 Zinc-binding dehydrogenase C0L89_05385 PF08240 Alcohol dehydrogenase GroES-like domain C0L89_05405 PF10459 Peptidase S46 C0L89_05410 PF00300 Histidine phosphatase superfamily (branch 1) C0L89_05420 PF08245 Mur ligase middle domain C0L89_05420 PF02875 Mur ligase family, glutamate ligase domain C0L89_05435 PF00156 Phosphoribosyl transferase domain C0L89_05440 PF04305 Protein of unknown function (DUF455) C0L89_05465 PF00149 Calcineurin-like phosphoesterase C0L89_05470 PF01569 PAP2 superfamily C0L89_05475 PF13439 Glycosyltransferase Family 4 C0L89_05475 PF00534 Glycosyl transferases group 1 C0L89_05480 PF02541 Ppx/GppA phosphatase family C0L89_05485 PF02503 Polyphosphate kinase middle domain C0L89_05485 PF13090 Polyphosphate kinase C-terminal domain 2 C0L89_05485 PF17941 Polyphosphate kinase C-terminal domain 1 C0L89_05485 PF13089 Polyphosphate kinase N-terminal domain C0L89_05490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_05490 PF00989 PAS fold C0L89_05490 PF11808 Phosphate regulon sensor protein PhoR C0L89_05490 PF00512 His Kinase A (phospho-acceptor) domain C0L89_05495 PF00486 Transcriptional regulatory protein, C terminal C0L89_05495 PF00072 Response regulator receiver domain C0L89_05500 PF13181 Tetratricopeptide repeat C0L89_05500 PF01435 Peptidase family M48 C0L89_05505 PF00462 Glutaredoxin C0L89_05515 PF00180 Isocitrate/isopropylmalate dehydrogenase C0L89_05515 PF18324 Hypothetical protein TT1725 C0L89_05560 PF05598 Transposase domain (DUF772) C0L89_05560 PF01609 Transposase DDE domain C0L89_05585 PF05698 Bacterial trigger factor protein (TF) C-terminus C0L89_05585 PF05697 Bacterial trigger factor protein (TF) C0L89_05590 PF00574 Clp protease C0L89_05595 PF07724 AAA domain (Cdc48 subfamily) C0L89_05595 PF10431 C-terminal, D2-small domain, of ClpB protein C0L89_05595 PF06689 ClpX C4-type zinc finger C0L89_05600 PF05362 Lon protease (S16) C-terminal proteolytic domain C0L89_05600 PF00004 ATPase family associated with various cellular activities (AAA) C0L89_05600 PF02190 ATP-dependent protease La (LON) substrate-binding domain C0L89_05605 PF00216 Bacterial DNA-binding protein C0L89_05630 PF01476 LysM domain C0L89_05630 PF05257 CHAP domain C0L89_05635 PF00753 Metallo-beta-lactamase superfamily C0L89_05635 PF16123 Hydroxyacylglutathione hydrolase C-terminus C0L89_05645 PF00075 RNase H C0L89_05650 PF00929 Exonuclease C0L89_05660 PF05598 Transposase domain (DUF772) C0L89_05685 PF05598 Transposase domain (DUF772) C0L89_05685 PF01609 Transposase DDE domain C0L89_05695 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C0L89_05705 PF12706 Beta-lactamase superfamily domain C0L89_05705 PF00753 Metallo-beta-lactamase superfamily C0L89_05710 PF06463 Molybdenum Cofactor Synthesis C C0L89_05710 PF04055 Radical SAM superfamily C0L89_05720 PF01967 MoaC family C0L89_05725 PF02597 ThiS family C0L89_05730 PF02391 MoaE protein C0L89_05760 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding C0L89_05760 PF12170 DNA polymerase III tau subunit V interacting with alpha C0L89_05760 PF12169 DNA polymerase III subunits gamma and tau domain III C0L89_05765 PF02575 YbaB/EbfC DNA-binding family C0L89_05770 PF02132 RecR protein C0L89_05770 PF13662 Toprim domain C0L89_05775 PF01230 HIT domain C0L89_05785 PF13559 Domain of unknown function (DUF4129) C0L89_05785 PF01841 Transglutaminase-like superfamily C0L89_05785 PF11992 Domain of unknown function (DUF3488) C0L89_05795 PF07726 ATPase family associated with various cellular activities (AAA) C0L89_05795 PF17863 AAA lid domain C0L89_05810 PF02545 Maf-like protein C0L89_05815 PF02620 Large ribosomal RNA subunit accumulation protein YceD C0L89_05820 PF01783 Ribosomal L32p protein family C0L89_05825 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C0L89_05825 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C0L89_05835 PF00698 Acyl transferase domain C0L89_05845 PF00550 Phosphopantetheine attachment site C0L89_05850 PF02801 Beta-ketoacyl synthase, C-terminal domain C0L89_05850 PF00109 Beta-ketoacyl synthase, N-terminal domain C0L89_05855 PF04715 Anthranilate synthase component I, N terminal region C0L89_05855 PF00425 chorismate binding enzyme C0L89_05860 PF02618 YceG-like family C0L89_05865 PF09115 DNA polymerase III, delta subunit, C terminal C0L89_05890 PF00158 Sigma-54 interaction domain C0L89_05890 PF06506 Propionate catabolism activator C0L89_05890 PF02954 Bacterial regulatory protein, Fis family C0L89_05900 PF00285 Citrate synthase, C-terminal domain C0L89_05905 PF00694 Aconitase C-terminal domain C0L89_05905 PF00330 Aconitase family (aconitate hydratase) C0L89_05920 PF04303 PrpF protein C0L89_05925 PF07715 TonB-dependent Receptor Plug Domain C0L89_05925 PF00593 TonB dependent receptor C0L89_05975 PF01556 DnaJ C terminal domain C0L89_05975 PF00226 DnaJ domain C0L89_05980 PF00072 Response regulator receiver domain C0L89_05990 PF01145 SPFH domain / Band 7 family C0L89_05990 PF12221 Bacterial membrane protein N terminal C0L89_05995 PF01145 SPFH domain / Band 7 family C0L89_06005 PF00709 Adenylosuccinate synthetase C0L89_06010 PF01433 Peptidase family M1 domain C0L89_06010 PF11838 ERAP1-like C-terminal domain C0L89_06025 PF01420 Type I restriction modification DNA specificity domain C0L89_06035 PF01420 Type I restriction modification DNA specificity domain C0L89_06040 PF02384 N-6 DNA Methylase C0L89_06050 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C0L89_06050 PF08463 EcoEI R protein C-terminal C0L89_06050 PF00271 Helicase conserved C-terminal domain C0L89_06050 PF04851 Type III restriction enzyme, res subunit C0L89_06090 PF00300 Histidine phosphatase superfamily (branch 1) C0L89_06090 PF13456 Reverse transcriptase-like C0L89_06120 PF01726 LexA DNA binding domain C0L89_06120 PF00717 Peptidase S24-like C0L89_06135 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C0L89_06135 PF14579 Helix-hairpin-helix motif C0L89_06135 PF02811 PHP domain C0L89_06135 PF07733 Bacterial DNA polymerase III alpha NTPase domain C0L89_06155 PF03169 OPT oligopeptide transporter protein C0L89_06170 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region C0L89_06170 PF00326 Prolyl oligopeptidase family C0L89_06170 PF07676 WD40-like Beta Propeller Repeat C0L89_06180 PF12833 Helix-turn-helix domain C0L89_06180 PF02311 AraC-like ligand binding domain C0L89_06225 PF00199 Catalase C0L89_06225 PF06628 Catalase-related immune-responsive C0L89_06225 PF18011 C-terminal domain found in long catalases C0L89_06255 PF02347 Glycine cleavage system P-protein C0L89_06275 PF03412 Peptidase C39 family C0L89_06275 PF00664 ABC transporter transmembrane region C0L89_06275 PF00005 ABC transporter C0L89_06295 PF08019 Phosphoethanolamine transferase EptA/EptB C0L89_06295 PF00884 Sulfatase C0L89_06305 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase C0L89_06310 PF00486 Transcriptional regulatory protein, C terminal C0L89_06310 PF00072 Response regulator receiver domain C0L89_06315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_06315 PF08521 Two-component sensor kinase N-terminal C0L89_06315 PF00512 His Kinase A (phospho-acceptor) domain C0L89_06325 PF03776 Septum formation topological specificity factor MinE C0L89_06330 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C0L89_06335 PF03775 Septum formation inhibitor MinC, C-terminal domain C0L89_06335 PF05209 Septum formation inhibitor MinC, N-terminal domain C0L89_06345 PF07730 Histidine kinase C0L89_06350 PF00072 Response regulator receiver domain C0L89_06350 PF00196 Bacterial regulatory proteins, luxR family C0L89_06365 PF00730 HhH-GPD superfamily base excision DNA repair protein C0L89_06390 PF02222 ATP-grasp domain C0L89_06435 PF04972 BON domain C0L89_06435 PF00691 OmpA family C0L89_06450 PF04717 Type VI secretion system, phage-baseplate injector C0L89_06460 PF13936 Helix-turn-helix domain C0L89_06460 PF00665 Integrase core domain C0L89_06470 PF05598 Transposase domain (DUF772) C0L89_06475 PF05598 Transposase domain (DUF772) C0L89_06485 PF01609 Transposase DDE domain C0L89_06485 PF05598 Transposase domain (DUF772) C0L89_06555 PF07724 AAA domain (Cdc48 subfamily) C0L89_06555 PF17871 AAA lid domain C0L89_06555 PF10431 C-terminal, D2-small domain, of ClpB protein C0L89_06555 PF00004 ATPase family associated with various cellular activities (AAA) C0L89_06565 PF16671 Actin cross-linking domain C0L89_06565 PF04717 Type VI secretion system, phage-baseplate injector C0L89_06590 PF01208 Uroporphyrinogen decarboxylase (URO-D) C0L89_06600 PF01761 3-dehydroquinate synthase C0L89_06605 PF01202 Shikimate kinase C0L89_06610 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region C0L89_06610 PF01243 Pyridoxamine 5'-phosphate oxidase C0L89_06620 PF04012 PspA/IM30 family C0L89_06645 PF03738 Glutathionylspermidine synthase preATP-grasp C0L89_06700 PF12706 Beta-lactamase superfamily domain C0L89_06710 PF05598 Transposase domain (DUF772) C0L89_06725 PF00324 Amino acid permease C0L89_06730 PF00196 Bacterial regulatory proteins, luxR family C0L89_06735 PF00561 alpha/beta hydrolase fold C0L89_06745 PF00324 Amino acid permease C0L89_06770 PF00145 C-5 cytosine-specific DNA methylase C0L89_06775 PF05598 Transposase domain (DUF772) C0L89_06775 PF01609 Transposase DDE domain C0L89_06785 PF02322 Cytochrome bd terminal oxidase subunit II C0L89_06790 PF00756 Putative esterase C0L89_06795 PF03448 MgtE intracellular N domain C0L89_06795 PF01769 Divalent cation transporter C0L89_06795 PF00571 CBS domain C0L89_06805 PF02896 PEP-utilising enzyme, TIM barrel domain C0L89_06805 PF00391 PEP-utilising enzyme, mobile domain C0L89_06805 PF05524 PEP-utilising enzyme, N-terminal C0L89_06810 PF00381 PTS HPr component phosphorylation site C0L89_06825 PF05598 Transposase domain (DUF772) C0L89_06825 PF01609 Transposase DDE domain C0L89_06840 PF03668 P-loop ATPase protein family C0L89_06845 PF07475 HPr Serine kinase C-terminal domain C0L89_06845 PF02603 HPr Serine kinase N terminus C0L89_06850 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C0L89_06855 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C0L89_06860 PF04963 Sigma-54 factor, core binding domain C0L89_06860 PF00309 Sigma-54 factor, Activator interacting domain (AID) C0L89_06860 PF04552 Sigma-54, DNA binding domain C0L89_06865 PF00005 ABC transporter C0L89_06870 PF03968 OstA-like protein C0L89_06885 PF01380 SIS domain C0L89_06885 PF00571 CBS domain C0L89_06890 PF01722 BolA-like protein C0L89_06895 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C0L89_06920 PF00551 Formyl transferase C0L89_06935 PF02769 AIR synthase related protein, C-terminal domain C0L89_06935 PF00586 AIR synthase related protein, N-terminal domain C0L89_06945 PF01594 AI-2E family transporter C0L89_06950 PF00308 Bacterial dnaA protein C0L89_06955 PF00483 Nucleotidyl transferase C0L89_06960 PF01636 Phosphotransferase enzyme family C0L89_06970 PF01546 Peptidase family M20/M25/M40 C0L89_06970 PF07687 Peptidase dimerisation domain C0L89_07000 PF05598 Transposase domain (DUF772) C0L89_07000 PF01609 Transposase DDE domain C0L89_07010 PF00355 Rieske [2Fe-2S] domain C0L89_07025 PF13936 Helix-turn-helix domain C0L89_07025 PF00665 Integrase core domain C0L89_07035 PF00266 Aminotransferase class-V C0L89_07040 PF01458 Uncharacterized protein family (UPF0051) C0L89_07045 PF00005 ABC transporter C0L89_07050 PF01458 Uncharacterized protein family (UPF0051) C0L89_07055 PF02082 Transcriptional regulator C0L89_07105 PF14748 Pyrroline-5-carboxylate reductase dimerisation C0L89_07105 PF03807 NADP oxidoreductase coenzyme F420-dependent C0L89_07110 PF01168 Alanine racemase, N-terminal domain C0L89_07120 PF00437 Type II/IV secretion system protein C0L89_07125 PF00437 Type II/IV secretion system protein C0L89_07145 PF13302 Acetyltransferase (GNAT) domain C0L89_07145 PF00117 Glutamine amidotransferase class-I C0L89_07145 PF03352 Methyladenine glycosylase C0L89_07145 PF13673 Acetyltransferase (GNAT) domain C0L89_07145 PF00958 GMP synthase C terminal domain C0L89_07160 PF02622 Uncharacterized ACR, COG1678 C0L89_07165 PF03652 Holliday junction resolvase C0L89_07170 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C0L89_07170 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C0L89_07180 PF02566 OsmC-like protein C0L89_07190 PF02567 Phenazine biosynthesis-like protein C0L89_07200 PF00696 Amino acid kinase family C0L89_07200 PF01842 ACT domain C0L89_07215 PF08245 Mur ligase middle domain C0L89_07230 PF01609 Transposase DDE domain C0L89_07230 PF05598 Transposase domain (DUF772) C0L89_07240 PF00348 Polyprenyl synthetase C0L89_07245 PF00436 Single-strand binding protein family C0L89_07250 PF00563 EAL domain C0L89_07250 PF01590 GAF domain C0L89_07250 PF00990 Diguanylate cyclase, GGDEF domain C0L89_07250 PF00360 Phytochrome region C0L89_07255 PF00109 Beta-ketoacyl synthase, N-terminal domain C0L89_07255 PF14765 Polyketide synthase dehydratase C0L89_07255 PF00550 Phosphopantetheine attachment site C0L89_07255 PF08659 KR domain C0L89_07255 PF02801 Beta-ketoacyl synthase, C-terminal domain C0L89_07255 PF16197 Ketoacyl-synthetase C-terminal extension C0L89_07255 PF08240 Alcohol dehydrogenase GroES-like domain C0L89_07255 PF00698 Acyl transferase domain C0L89_07255 PF09277 Erythronolide synthase, docking C0L89_07255 PF08990 Erythronolide synthase docking C0L89_07295 PF04328 Selenoprotein, putative C0L89_07300 PF02554 Carbon starvation protein CstA C0L89_07300 PF13722 5TM C-terminal transporter carbon starvation CstA C0L89_07305 PF05726 Pirin C-terminal cupin domain C0L89_07305 PF02678 Pirin C0L89_07315 PF04717 Type VI secretion system, phage-baseplate injector C0L89_07355 PF05598 Transposase domain (DUF772) C0L89_07375 PF05598 Transposase domain (DUF772) C0L89_07410 PF04493 Endonuclease V C0L89_07415 PF00300 Histidine phosphatase superfamily (branch 1) C0L89_07425 PF00072 Response regulator receiver domain C0L89_07425 PF01339 CheB methylesterase C0L89_07430 PF01739 CheR methyltransferase, SAM binding domain C0L89_07430 PF03705 CheR methyltransferase, all-alpha domain C0L89_07435 PF00563 EAL domain C0L89_07435 PF00990 Diguanylate cyclase, GGDEF domain C0L89_07435 PF13426 PAS domain C0L89_07440 PF01584 CheW-like domain C0L89_07445 PF02203 Tar ligand binding domain homologue C0L89_07445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0L89_07445 PF00672 HAMP domain C0L89_07455 PF02895 Signal transducing histidine kinase, homodimeric domain C0L89_07455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_07455 PF01584 CheW-like domain C0L89_07455 PF09078 CheY binding C0L89_07455 PF01627 Hpt domain C0L89_07465 PF00270 DEAD/DEAH box helicase C0L89_07465 PF03461 TRCF domain C0L89_07465 PF17757 UvrB interaction domain C0L89_07465 PF02559 CarD-like/TRCF domain C0L89_07465 PF00271 Helicase conserved C-terminal domain C0L89_07475 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ C0L89_07500 PF00795 Carbon-nitrogen hydrolase C0L89_07510 PF00749 tRNA synthetases class I (E and Q), catalytic domain C0L89_07515 PF01475 Ferric uptake regulator family C0L89_07545 PF13936 Helix-turn-helix domain C0L89_07545 PF00665 Integrase core domain C0L89_07550 PF05598 Transposase domain (DUF772) C0L89_07620 PF00107 Zinc-binding dehydrogenase C0L89_07620 PF08240 Alcohol dehydrogenase GroES-like domain C0L89_07625 PF00654 Voltage gated chloride channel C0L89_07635 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C0L89_07635 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C0L89_07675 PF04542 Sigma-70 region 2 C0L89_07675 PF04545 Sigma-70, region 4 C0L89_07675 PF04539 Sigma-70 region 3 C0L89_07680 PF03880 DbpA RNA binding domain C0L89_07680 PF00270 DEAD/DEAH box helicase C0L89_07680 PF00271 Helicase conserved C-terminal domain C0L89_07685 PF08448 PAS fold C0L89_07685 PF00563 EAL domain C0L89_07685 PF00990 Diguanylate cyclase, GGDEF domain C0L89_07690 PF01479 S4 domain C0L89_07690 PF00849 RNA pseudouridylate synthase C0L89_07710 PF03737 Aldolase/RraA C0L89_07715 PF00144 Beta-lactamase C0L89_07720 PF00999 Sodium/hydrogen exchanger family C0L89_07725 PF00512 His Kinase A (phospho-acceptor) domain C0L89_07725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_07725 PF00672 HAMP domain C0L89_07730 PF00072 Response regulator receiver domain C0L89_07730 PF00486 Transcriptional regulatory protein, C terminal C0L89_07735 PF02321 Outer membrane efflux protein C0L89_07750 PF00873 AcrB/AcrD/AcrF family C0L89_07760 PF00664 ABC transporter transmembrane region C0L89_07760 PF00005 ABC transporter C0L89_07825 PF00085 Thioredoxin C0L89_07835 PF08264 Anticodon-binding domain of tRNA C0L89_07835 PF13603 Leucyl-tRNA synthetase, Domain 2 C0L89_07835 PF00133 tRNA synthetases class I (I, L, M and V) C0L89_07855 PF01467 Cytidylyltransferase-like C0L89_07875 PF02590 Predicted SPOUT methyltransferase C0L89_07885 PF03544 Gram-negative bacterial TonB protein C-terminal C0L89_07900 PF04402 Protein of unknown function (DUF541) C0L89_07905 PF02545 Maf-like protein C0L89_07910 PF00575 S1 RNA binding domain C0L89_07910 PF10150 Ribonuclease E/G family C0L89_07915 PF13502 AsmA-like C-terminal region C0L89_07915 PF13116 Protein of unknown function C0L89_07925 PF01523 Putative modulator of DNA gyrase C0L89_07930 PF04751 Protein of unknown function (DUF615) C0L89_07935 PF01523 Putative modulator of DNA gyrase C0L89_07950 PF14521 Lysine-specific metallo-endopeptidase C0L89_07960 PF00348 Polyprenyl synthetase C0L89_07965 PF02609 Exonuclease VII small subunit C0L89_07970 PF11734 TilS substrate C-terminal domain C0L89_07970 PF01171 PP-loop family C0L89_07970 PF09179 TilS substrate binding domain C0L89_07975 PF00245 Alkaline phosphatase C0L89_07980 PF00375 Sodium:dicarboxylate symporter family C0L89_07995 PF00877 NlpC/P60 family C0L89_08000 PF00877 NlpC/P60 family C0L89_08005 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C0L89_08010 PF04235 Protein of unknown function (DUF418) C0L89_08015 PF01266 FAD dependent oxidoreductase C0L89_08020 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C0L89_08020 PF07992 Pyridine nucleotide-disulphide oxidoreductase C0L89_08045 PF01609 Transposase DDE domain C0L89_08045 PF05598 Transposase domain (DUF772) C0L89_08055 PF13936 Helix-turn-helix domain C0L89_08055 PF00665 Integrase core domain C0L89_08070 PF05598 Transposase domain (DUF772) C0L89_08085 PF13936 Helix-turn-helix domain C0L89_08085 PF00665 Integrase core domain C0L89_08090 PF01609 Transposase DDE domain C0L89_08090 PF05598 Transposase domain (DUF772) C0L89_08105 PF10609 NUBPL iron-transfer P-loop NTPase C0L89_08115 PF00692 dUTPase C0L89_08130 PF05598 Transposase domain (DUF772) C0L89_08130 PF01609 Transposase DDE domain C0L89_08145 PF01738 Dienelactone hydrolase family C0L89_08150 PF18693 TRAM domain C0L89_08150 PF00919 Uncharacterized protein family UPF0004 C0L89_08150 PF04055 Radical SAM superfamily C0L89_08160 PF05598 Transposase domain (DUF772) C0L89_08160 PF01609 Transposase DDE domain C0L89_08170 PF03449 Transcription elongation factor, N-terminal C0L89_08170 PF01272 Transcription elongation factor, GreA/GreB, C-term C0L89_08190 PF05872 Bacterial protein of unknown function (DUF853) C0L89_08210 PF02666 Phosphatidylserine decarboxylase C0L89_08215 PF02630 SCO1/SenC C0L89_08220 PF05175 Methyltransferase small domain C0L89_08225 PF01264 Chorismate synthase C0L89_08230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C0L89_08230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C0L89_08235 PF01118 Semialdehyde dehydrogenase, NAD binding domain C0L89_08235 PF02774 Semialdehyde dehydrogenase, dimerisation domain C0L89_08255 PF01416 tRNA pseudouridine synthase C0L89_08260 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C0L89_08265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L89_08265 PF03466 LysR substrate binding domain C0L89_08270 PF00291 Pyridoxal-phosphate dependent enzyme C0L89_08280 PF00290 Tryptophan synthase alpha chain C0L89_08285 PF01039 Carboxyl transferase domain C0L89_08285 PF17848 Acetyl-coA carboxylase zinc finger domain C0L89_08290 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C0L89_08290 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C0L89_08290 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C0L89_08290 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C0L89_08305 PF00563 EAL domain C0L89_08305 PF00990 Diguanylate cyclase, GGDEF domain C0L89_08305 PF03707 Bacterial signalling protein N terminal repeat C0L89_08335 PF05598 Transposase domain (DUF772) C0L89_08350 PF00121 Triosephosphate isomerase C0L89_08365 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C0L89_08370 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C0L89_08375 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C0L89_08380 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C0L89_08390 PF10531 SLBB domain C0L89_08390 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C0L89_08390 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C0L89_08395 PF00384 Molybdopterin oxidoreductase C0L89_08395 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal C0L89_08395 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C0L89_08400 PF00146 NADH dehydrogenase C0L89_08405 PF12838 4Fe-4S dicluster domain C0L89_08410 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 C0L89_08415 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C0L89_08420 PF00361 Proton-conducting membrane transporter C0L89_08420 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C0L89_08425 PF00361 Proton-conducting membrane transporter C0L89_08425 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus C0L89_08430 PF00361 Proton-conducting membrane transporter C0L89_08440 PF17384 RimP C-terminal SH3 domain C0L89_08440 PF02576 RimP N-terminal domain C0L89_08445 PF00575 S1 RNA binding domain C0L89_08445 PF08529 NusA N-terminal domain C0L89_08445 PF13184 NusA-like KH domain C0L89_08450 PF04760 Translation initiation factor IF-2, N-terminal region C0L89_08450 PF08364 Bacterial translation initiation factor IF-2 associated region C0L89_08450 PF11987 Translation-initiation factor 2 C0L89_08450 PF00009 Elongation factor Tu GTP binding domain C0L89_08455 PF02033 Ribosome-binding factor A C0L89_08460 PF01509 TruB family pseudouridylate synthase (N terminal domain) C0L89_08460 PF09157 Pseudouridine synthase II TruB, C-terminal C0L89_08460 PF16198 tRNA pseudouridylate synthase B C-terminal domain C0L89_08465 PF00312 Ribosomal protein S15 C0L89_08470 PF03725 3' exoribonuclease family, domain 2 C0L89_08470 PF00013 KH domain C0L89_08470 PF00575 S1 RNA binding domain C0L89_08470 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C0L89_08470 PF01138 3' exoribonuclease family, domain 1 C0L89_08480 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C0L89_08480 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C0L89_08490 PF00731 AIR carboxylase C0L89_08495 PF02222 ATP-grasp domain C0L89_08495 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain C0L89_08500 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C0L89_08500 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C0L89_08505 PF00462 Glutaredoxin C0L89_08515 PF01914 MarC family integral membrane protein C0L89_08525 PF00593 TonB dependent receptor C0L89_08530 PF11892 Domain of unknown function (DUF3412) C0L89_08530 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases C0L89_08530 PF03641 Possible lysine decarboxylase C0L89_08535 PF12019 Type II transport protein GspH C0L89_08535 PF07963 Prokaryotic N-terminal methylation motif C0L89_08560 PF05567 Neisseria PilC beta-propeller domain C0L89_08575 PF00114 Pilin (bacterial filament) C0L89_08575 PF07963 Prokaryotic N-terminal methylation motif C0L89_08580 PF17757 UvrB interaction domain C0L89_08580 PF12344 Ultra-violet resistance protein B C0L89_08580 PF02151 UvrB/uvrC motif C0L89_08580 PF04851 Type III restriction enzyme, res subunit C0L89_08580 PF00271 Helicase conserved C-terminal domain C0L89_08610 PF17391 Urocanase N-terminal domain C0L89_08610 PF17392 Urocanase C-terminal domain C0L89_08610 PF01175 Urocanase Rossmann-like domain C0L89_08620 PF00221 Aromatic amino acid lyase C0L89_08625 PF07969 Amidohydrolase family C0L89_08635 PF00392 Bacterial regulatory proteins, gntR family C0L89_08635 PF07702 UTRA domain C0L89_08660 PF01794 Ferric reductase like transmembrane component C0L89_08670 PF00174 Oxidoreductase molybdopterin binding domain C0L89_08675 PF00266 Aminotransferase class-V C0L89_08680 PF01842 ACT domain C0L89_08680 PF00800 Prephenate dehydratase C0L89_08680 PF01817 Chorismate mutase type II C0L89_08685 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C0L89_08710 PF01609 Transposase DDE domain C0L89_08710 PF05598 Transposase domain (DUF772) C0L89_08715 PF03544 Gram-negative bacterial TonB protein C-terminal C0L89_08720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C0L89_08720 PF02403 Seryl-tRNA synthetase N-terminal domain C0L89_08730 PF02525 Flavodoxin-like fold C0L89_08735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L89_08735 PF03466 LysR substrate binding domain C0L89_08750 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin C0L89_08775 PF03377 TAL effector repeat C0L89_08795 PF00672 HAMP domain C0L89_08795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0L89_08795 PF02203 Tar ligand binding domain homologue C0L89_08815 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C0L89_08815 PF00072 Response regulator receiver domain C0L89_08815 PF00512 His Kinase A (phospho-acceptor) domain C0L89_08815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_08815 PF01627 Hpt domain C0L89_08815 PF00672 HAMP domain C0L89_08820 PF06745 KaiC C0L89_08825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_08825 PF13426 PAS domain C0L89_08825 PF00072 Response regulator receiver domain C0L89_08835 PF03918 Cytochrome C biogenesis protein C0L89_08840 PF08534 Redoxin C0L89_08845 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal C0L89_08845 PF01578 Cytochrome C assembly protein C0L89_08850 PF03100 CcmE C0L89_08855 PF04995 Heme exporter protein D (CcmD) C0L89_08860 PF01578 Cytochrome C assembly protein C0L89_08865 PF00082 Subtilase family C0L89_08875 PF08281 Sigma-70, region 4 C0L89_08875 PF04542 Sigma-70 region 2 C0L89_08885 PF00034 Cytochrome c C0L89_08900 PF05523 WxcM-like, C-terminal C0L89_08920 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C0L89_08925 PF01943 Polysaccharide biosynthesis protein C0L89_08930 PF00535 Glycosyl transferase family 2 C0L89_08965 PF13579 Glycosyl transferase 4-like domain C0L89_08965 PF00534 Glycosyl transferases group 1 C0L89_08980 PF06745 KaiC C0L89_08985 PF00664 ABC transporter transmembrane region C0L89_08985 PF00005 ABC transporter C0L89_08995 PF00083 Sugar (and other) transporter C0L89_09015 PF00296 Luciferase-like monooxygenase C0L89_09030 PF01595 Cyclin M transmembrane N-terminal domain C0L89_09030 PF03471 Transporter associated domain C0L89_09030 PF00571 CBS domain C0L89_09045 PF01384 Phosphate transporter family C0L89_09065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_09065 PF00204 DNA gyrase B C0L89_09065 PF00986 DNA gyrase B subunit, carboxyl terminus C0L89_09065 PF01751 Toprim domain C0L89_09075 PF06418 CTP synthase N-terminus C0L89_09075 PF00117 Glutamine amidotransferase class-I C0L89_09080 PF00793 DAHP synthetase I family C0L89_09085 PF03952 Enolase, N-terminal domain C0L89_09085 PF00113 Enolase, C-terminal TIM barrel domain C0L89_09090 PF04977 Septum formation initiator C0L89_09095 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C0L89_09105 PF02542 YgbB family C0L89_09110 PF01142 tRNA pseudouridine synthase D (TruD) C0L89_09115 PF01713 Smr domain C0L89_09120 PF01975 Survival protein SurE C0L89_09130 PF09335 SNARE associated Golgi protein C0L89_09135 PF01476 LysM domain C0L89_09135 PF01551 Peptidase family M23 C0L89_09145 PF01985 CRS1 / YhbY (CRM) domain C0L89_09150 PF01728 FtsJ-like methyltransferase C0L89_09155 PF06480 FtsH Extracellular C0L89_09155 PF17862 AAA+ lid domain C0L89_09155 PF00004 ATPase family associated with various cellular activities (AAA) C0L89_09155 PF01434 Peptidase family M41 C0L89_09160 PF00809 Pterin binding enzyme C0L89_09170 PF17209 Hfq protein C0L89_09175 PF13167 GTP-binding GTPase N-terminal C0L89_09175 PF01926 50S ribosome-binding GTPase C0L89_09175 PF16360 GTP-binding GTPase Middle Region C0L89_09180 PF02464 Competence-damaged protein C0L89_09185 PF03109 ABC1 family C0L89_09190 PF00717 Peptidase S24-like C0L89_09190 PF01726 LexA DNA binding domain C0L89_09195 PF00154 recA bacterial DNA recombination protein C0L89_09205 PF02631 RecX family C0L89_09210 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C0L89_09210 PF02272 DHHA1 domain C0L89_09210 PF01411 tRNA synthetases class II (A) C0L89_09215 PF02599 Global regulator protein family C0L89_09270 PF17954 Quercetinase C-terminal cupin domain C0L89_09270 PF02678 Pirin C0L89_09275 PF03466 LysR substrate binding domain C0L89_09275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L89_09300 PF02581 Thiamine monophosphate synthase C0L89_09300 PF08543 Phosphomethylpyrimidine kinase C0L89_09310 PF02562 PhoH-like protein C0L89_09310 PF13638 PIN domain C0L89_09315 PF00578 AhpC/TSA family C0L89_09330 PF00701 Dihydrodipicolinate synthetase family C0L89_09340 PF00037 4Fe-4S binding domain C0L89_09340 PF11953 Domain of unknown function (DUF3470) C0L89_09345 PF05035 2-keto-3-deoxy-galactonokinase C0L89_09350 PF08450 SMP-30/Gluconolactonase/LRE-like region C0L89_09355 PF13378 Enolase C-terminal domain-like C0L89_09355 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C0L89_09360 PF01081 KDPG and KHG aldolase C0L89_09365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L89_09365 PF03466 LysR substrate binding domain C0L89_09385 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C0L89_09385 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C0L89_09395 PF00083 Sugar (and other) transporter C0L89_09415 PF01520 N-acetylmuramoyl-L-alanine amidase C0L89_09420 PF02649 Type I GTP cyclohydrolase folE2 C0L89_09430 PF01743 Poly A polymerase head domain C0L89_09430 PF12626 Polymerase A arginine-rich C-terminus C0L89_09430 PF12627 Probable RNA and SrmB- binding site of polymerase A C0L89_09435 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C0L89_09440 PF02548 Ketopantoate hydroxymethyltransferase C0L89_09445 PF02569 Pantoate-beta-alanine ligase C0L89_09450 PF02261 Aspartate decarboxylase C0L89_09455 PF00342 Phosphoglucose isomerase C0L89_09480 PF01915 Glycosyl hydrolase family 3 C-terminal domain C0L89_09480 PF00933 Glycosyl hydrolase family 3 N terminal domain C0L89_09480 PF14310 Fibronectin type III-like domain C0L89_09490 PF00474 Sodium:solute symporter family C0L89_09500 PF00563 EAL domain C0L89_09500 PF01590 GAF domain C0L89_09500 PF00990 Diguanylate cyclase, GGDEF domain C0L89_09500 PF00360 Phytochrome region C0L89_09510 PF00150 Cellulase (glycosyl hydrolase family 5) C0L89_09510 PF02013 Cellulose or protein binding domain C0L89_09520 PF00072 Response regulator receiver domain C0L89_09530 PF04551 GcpE protein C0L89_09535 PF01569 PAP2 superfamily C0L89_09545 PF07690 Major Facilitator Superfamily C0L89_09555 PF01177 Asp/Glu/Hydantoin racemase C0L89_09565 PF00892 EamA-like transporter family C0L89_09570 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C0L89_09570 PF01565 FAD binding domain C0L89_09575 PF01180 Dihydroorotate dehydrogenase C0L89_09595 PF00171 Aldehyde dehydrogenase family C0L89_09630 PF00742 Homoserine dehydrogenase C0L89_09630 PF00696 Amino acid kinase family C0L89_09630 PF03447 Homoserine dehydrogenase, NAD binding domain C0L89_09630 PF01842 ACT domain C0L89_09630 PF13840 ACT domain C0L89_09635 PF08544 GHMP kinases C terminal C0L89_09635 PF00288 GHMP kinases N terminal domain C0L89_09640 PF07519 Tannase and feruloyl esterase C0L89_09655 PF00291 Pyridoxal-phosphate dependent enzyme C0L89_09655 PF14821 Threonine synthase N terminus C0L89_09670 PF13393 Histidyl-tRNA synthetase C0L89_09670 PF03129 Anticodon binding domain C0L89_09695 PF01634 ATP phosphoribosyltransferase C0L89_09695 PF08029 HisG, C-terminal domain C0L89_09700 PF00815 Histidinol dehydrogenase C0L89_09705 PF00155 Aminotransferase class I and II C0L89_09710 PF00475 Imidazoleglycerol-phosphate dehydratase C0L89_09715 PF00117 Glutamine amidotransferase class-I C0L89_09720 PF00977 Histidine biosynthesis protein C0L89_09725 PF00977 Histidine biosynthesis protein C0L89_09730 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase C0L89_09730 PF01502 Phosphoribosyl-AMP cyclohydrolase C0L89_09755 PF03079 ARD/ARD' family C0L89_09760 PF00596 Class II Aldolase and Adducin N-terminal domain C0L89_09765 PF13520 Amino acid permease C0L89_09770 PF13520 Amino acid permease C0L89_09780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C0L89_09780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C0L89_09785 PF01565 FAD binding domain C0L89_09785 PF02913 FAD linked oxidases, C-terminal domain C0L89_09810 PF01132 Elongation factor P (EF-P) OB domain C0L89_09810 PF08207 Elongation factor P (EF-P) KOW-like domain C0L89_09810 PF09285 Elongation factor P, C-terminal C0L89_09815 PF00106 short chain dehydrogenase C0L89_09820 PF00682 HMGL-like C0L89_09830 PF00378 Enoyl-CoA hydratase/isomerase C0L89_09840 PF07670 Nucleoside recognition C0L89_09840 PF02421 Ferrous iron transport protein B C0L89_09840 PF07664 Ferrous iron transport protein B C terminus C0L89_09860 PF00155 Aminotransferase class I and II C0L89_09865 PF03475 3-alpha domain C0L89_09865 PF03473 MOSC domain C0L89_09870 PF01113 Dihydrodipicolinate reductase, N-terminus C0L89_09870 PF05173 Dihydrodipicolinate reductase, C-terminus C0L89_09875 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C0L89_09875 PF00117 Glutamine amidotransferase class-I C0L89_09885 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C0L89_09885 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C0L89_09885 PF02142 MGS-like domain C0L89_09890 PF01272 Transcription elongation factor, GreA/GreB, C-term C0L89_09890 PF03449 Transcription elongation factor, N-terminal C0L89_09900 PF01368 DHH family C0L89_09900 PF02272 DHHA1 domain C0L89_09900 PF17768 RecJ OB domain C0L89_09915 PF00072 Response regulator receiver domain C0L89_09915 PF04397 LytTr DNA-binding domain C0L89_09925 PF00152 tRNA synthetases class II (D, K and N) C0L89_09925 PF01336 OB-fold nucleic acid binding domain C0L89_09930 PF00072 Response regulator receiver domain C0L89_09940 PF00512 His Kinase A (phospho-acceptor) domain C0L89_09940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_09940 PF00072 Response regulator receiver domain C0L89_09940 PF01627 Hpt domain C0L89_09945 PF00378 Enoyl-CoA hydratase/isomerase C0L89_09950 PF00501 AMP-binding enzyme C0L89_09950 PF13193 AMP-binding enzyme C-terminal domain C0L89_09960 PF00330 Aconitase family (aconitate hydratase) C0L89_09960 PF00694 Aconitase C-terminal domain C0L89_09975 PF06434 Aconitate hydratase 2 N-terminus C0L89_09975 PF00330 Aconitase family (aconitate hydratase) C0L89_09975 PF11791 Aconitate B N-terminal domain C0L89_09980 PF00561 alpha/beta hydrolase fold C0L89_09990 PF03707 Bacterial signalling protein N terminal repeat C0L89_09990 PF00563 EAL domain C0L89_09990 PF00990 Diguanylate cyclase, GGDEF domain C0L89_09995 PF00072 Response regulator receiver domain C0L89_09995 PF01339 CheB methylesterase C0L89_10000 PF03975 CheD chemotactic sensory transduction C0L89_10005 PF03705 CheR methyltransferase, all-alpha domain C0L89_10005 PF01739 CheR methyltransferase, SAM binding domain C0L89_10010 PF00672 HAMP domain C0L89_10010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0L89_10010 PF02203 Tar ligand binding domain homologue C0L89_10020 PF01584 CheW-like domain C0L89_10025 PF07238 PilZ domain C0L89_10025 PF07317 Flagellar regulator YcgR C0L89_10035 PF02203 Tar ligand binding domain homologue C0L89_10035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0L89_10035 PF00672 HAMP domain C0L89_10040 PF00672 HAMP domain C0L89_10040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0L89_10040 PF02203 Tar ligand binding domain homologue C0L89_10045 PF00672 HAMP domain C0L89_10045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0L89_10045 PF02203 Tar ligand binding domain homologue C0L89_10060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0L89_10060 PF02203 Tar ligand binding domain homologue C0L89_10060 PF00672 HAMP domain C0L89_10065 PF05598 Transposase domain (DUF772) C0L89_10070 PF00672 HAMP domain C0L89_10070 PF02203 Tar ligand binding domain homologue C0L89_10070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0L89_10075 PF00672 HAMP domain C0L89_10075 PF02203 Tar ligand binding domain homologue C0L89_10075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0L89_10105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0L89_10105 PF00672 HAMP domain C0L89_10105 PF02203 Tar ligand binding domain homologue C0L89_10110 PF00665 Integrase core domain C0L89_10110 PF13936 Helix-turn-helix domain C0L89_10125 PF02895 Signal transducing histidine kinase, homodimeric domain C0L89_10125 PF01584 CheW-like domain C0L89_10125 PF01627 Hpt domain C0L89_10125 PF09078 CheY binding C0L89_10125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_10130 PF00072 Response regulator receiver domain C0L89_10140 PF01584 CheW-like domain C0L89_10145 PF13614 AAA domain C0L89_10150 PF00691 OmpA family C0L89_10150 PF13677 Membrane MotB of proton-channel complex MotA/MotB C0L89_10155 PF01618 MotA/TolQ/ExbB proton channel family C0L89_10175 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C0L89_10175 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C0L89_10190 PF00593 TonB dependent receptor C0L89_10190 PF07715 TonB-dependent Receptor Plug Domain C0L89_10210 PF17728 BsuBI/PstI restriction endonuclease HTH domain C0L89_10210 PF06616 BsuBI/PstI restriction endonuclease domain C0L89_10215 PF05598 Transposase domain (DUF772) C0L89_10215 PF01609 Transposase DDE domain C0L89_10260 PF05598 Transposase domain (DUF772) C0L89_10270 PF05598 Transposase domain (DUF772) C0L89_10280 PF07194 P2 response regulator binding domain C0L89_10280 PF01584 CheW-like domain C0L89_10280 PF01627 Hpt domain C0L89_10280 PF02895 Signal transducing histidine kinase, homodimeric domain C0L89_10280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_10285 PF04344 Chemotaxis phosphatase, CheZ C0L89_10290 PF00072 Response regulator receiver domain C0L89_10295 PF04545 Sigma-70, region 4 C0L89_10295 PF04539 Sigma-70 region 3 C0L89_10295 PF04542 Sigma-70 region 2 C0L89_10300 PF10609 NUBPL iron-transfer P-loop NTPase C0L89_10305 PF00448 SRP54-type protein, GTPase domain C0L89_10310 PF00771 FHIPEP family C0L89_10315 PF01312 FlhB HrpN YscU SpaS Family C0L89_10320 PF00990 Diguanylate cyclase, GGDEF domain C0L89_10320 PF00563 EAL domain C0L89_10320 PF03707 Bacterial signalling protein N terminal repeat C0L89_10325 PF03707 Bacterial signalling protein N terminal repeat C0L89_10325 PF00990 Diguanylate cyclase, GGDEF domain C0L89_10325 PF00563 EAL domain C0L89_10325 PF13188 PAS domain C0L89_10330 PF13188 PAS domain C0L89_10330 PF03707 Bacterial signalling protein N terminal repeat C0L89_10330 PF00990 Diguanylate cyclase, GGDEF domain C0L89_10330 PF00563 EAL domain C0L89_10335 PF01311 Bacterial export proteins, family 1 C0L89_10340 PF01313 Bacterial export proteins, family 3 C0L89_10345 PF00813 FliP family C0L89_10350 PF04347 Flagellar biosynthesis protein, FliO C0L89_10355 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C0L89_10360 PF02154 Flagellar motor switch protein FliM C0L89_10360 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C0L89_10380 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C0L89_10380 PF18269 T3SS EscN ATPase C-terminal domain C0L89_10390 PF01706 FliG C-terminal domain C0L89_10390 PF14841 FliG middle domain C0L89_10390 PF14842 FliG N-terminal domain C0L89_10395 PF08345 Flagellar M-ring protein C-terminal C0L89_10395 PF01514 Secretory protein of YscJ/FliF family C0L89_10400 PF02049 Flagellar hook-basal body complex protein FliE C0L89_10410 PF00534 Glycosyl transferases group 1 C0L89_10410 PF00535 Glycosyl transferase family 2 C0L89_10445 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C0L89_10445 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C0L89_10455 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C0L89_10460 PF02954 Bacterial regulatory protein, Fis family C0L89_10460 PF00158 Sigma-54 interaction domain C0L89_10460 PF00072 Response regulator receiver domain C0L89_10465 PF01339 CheB methylesterase C0L89_10465 PF00072 Response regulator receiver domain C0L89_10470 PF04552 Sigma-54, DNA binding domain C0L89_10470 PF04963 Sigma-54 factor, core binding domain C0L89_10470 PF00309 Sigma-54 factor, Activator interacting domain (AID) C0L89_10475 PF00072 Response regulator receiver domain C0L89_10475 PF00196 Bacterial regulatory proteins, luxR family C0L89_10490 PF02561 Flagellar protein FliS C0L89_10495 PF07196 Flagellin hook IN motif C0L89_10495 PF07195 Flagellar hook-associated protein 2 C-terminus C0L89_10495 PF02465 Flagellar hook-associated protein 2 N-terminus C0L89_10500 PF00700 Bacterial flagellin C-terminal helical region C0L89_10500 PF00669 Bacterial flagellin N-terminal helical region C0L89_10510 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C0L89_10510 PF07196 Flagellin hook IN motif C0L89_10515 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase C0L89_10515 PF10135 Rod binding protein C0L89_10520 PF02119 Flagellar P-ring protein C0L89_10525 PF02107 Flagellar L-ring protein C0L89_10530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C0L89_10530 PF00460 Flagella basal body rod protein C0L89_10540 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C0L89_10540 PF00460 Flagella basal body rod protein C0L89_10545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C0L89_10545 PF00460 Flagella basal body rod protein C0L89_10545 PF07559 Flagellar basal body protein FlaE C0L89_10550 PF03963 Flagellar hook capping protein - N-terminal region C0L89_10555 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C0L89_10555 PF00460 Flagella basal body rod protein C0L89_10565 PF00072 Response regulator receiver domain C0L89_10565 PF01584 CheW-like domain C0L89_10585 PF00989 PAS fold C0L89_10585 PF13426 PAS domain C0L89_10585 PF13188 PAS domain C0L89_10585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_10585 PF00512 His Kinase A (phospho-acceptor) domain C0L89_10590 PF00563 EAL domain C0L89_10590 PF03707 Bacterial signalling protein N terminal repeat C0L89_10590 PF00990 Diguanylate cyclase, GGDEF domain C0L89_10595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_10595 PF07730 Histidine kinase C0L89_10600 PF03707 Bacterial signalling protein N terminal repeat C0L89_10600 PF00990 Diguanylate cyclase, GGDEF domain C0L89_10600 PF00563 EAL domain C0L89_10620 PF12729 Four helix bundle sensory module for signal transduction C0L89_10620 PF00672 HAMP domain C0L89_10620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0L89_10625 PF04356 Protein of unknown function (DUF489) C0L89_10635 PF00293 NUDIX domain C0L89_10640 PF02617 ATP-dependent Clp protease adaptor protein ClpS C0L89_10645 PF00004 ATPase family associated with various cellular activities (AAA) C0L89_10645 PF07724 AAA domain (Cdc48 subfamily) C0L89_10645 PF17871 AAA lid domain C0L89_10645 PF02861 Clp amino terminal domain, pathogenicity island component C0L89_10645 PF10431 C-terminal, D2-small domain, of ClpB protein C0L89_10650 PF01176 Translation initiation factor 1A / IF-1 C0L89_10655 PF03588 Leucyl/phenylalanyl-tRNA protein transferase C0L89_10670 PF07992 Pyridine nucleotide-disulphide oxidoreductase C0L89_10675 PF09397 Ftsk gamma domain C0L89_10675 PF13491 4TM region of DNA translocase FtsK/SpoIIIE C0L89_10675 PF17854 FtsK alpha domain C0L89_10675 PF01580 FtsK/SpoIIIE family C0L89_10685 PF03548 Outer membrane lipoprotein carrier protein LolA C0L89_10700 PF00004 ATPase family associated with various cellular activities (AAA) C0L89_10700 PF16193 AAA C-terminal domain C0L89_10700 PF12002 MgsA AAA+ ATPase C terminal C0L89_10710 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C0L89_10720 PF00654 Voltage gated chloride channel C0L89_10725 PF00108 Thiolase, N-terminal domain C0L89_10725 PF02803 Thiolase, C-terminal domain C0L89_10730 PF00378 Enoyl-CoA hydratase/isomerase C0L89_10730 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C0L89_10730 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C0L89_10740 PF00334 Nucleoside diphosphate kinase C0L89_10745 PF04055 Radical SAM superfamily C0L89_10755 PF13464 Domain of unknown function (DUF4115) C0L89_10765 PF13360 PQQ-like domain C0L89_10765 PF01011 PQQ enzyme repeat C0L89_10770 PF01926 50S ribosome-binding GTPase C0L89_10770 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C0L89_10775 PF00994 Probable molybdopterin binding domain C0L89_10775 PF03453 MoeA N-terminal region (domain I and II) C0L89_10775 PF03454 MoeA C-terminal region (domain IV) C0L89_10785 PF00899 ThiF family C0L89_10795 PF00665 Integrase core domain C0L89_10795 PF13936 Helix-turn-helix domain C0L89_10805 PF01609 Transposase DDE domain C0L89_10805 PF05598 Transposase domain (DUF772) C0L89_10825 PF03453 MoeA N-terminal region (domain I and II) C0L89_10825 PF00994 Probable molybdopterin binding domain C0L89_10825 PF03454 MoeA C-terminal region (domain IV) C0L89_10830 PF12804 MobA-like NTP transferase domain C0L89_10855 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C0L89_10855 PF14824 Sirohaem biosynthesis protein central C0L89_10855 PF10414 Sirohaem synthase dimerisation region C0L89_10895 PF05598 Transposase domain (DUF772) C0L89_10895 PF01609 Transposase DDE domain C0L89_10920 PF08448 PAS fold C0L89_10920 PF08447 PAS fold C0L89_10920 PF00990 Diguanylate cyclase, GGDEF domain C0L89_10920 PF00563 EAL domain C0L89_10925 PF12951 Passenger-associated-transport-repeat C0L89_10930 PF00072 Response regulator receiver domain C0L89_10930 PF00196 Bacterial regulatory proteins, luxR family C0L89_10935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_10935 PF08448 PAS fold C0L89_10935 PF00512 His Kinase A (phospho-acceptor) domain C0L89_10935 PF00072 Response regulator receiver domain C0L89_10935 PF13426 PAS domain C0L89_10945 PF00873 AcrB/AcrD/AcrF family C0L89_10950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C0L89_10960 PF03797 Autotransporter beta-domain C0L89_10960 PF00082 Subtilase family C0L89_10980 PF16671 Actin cross-linking domain C0L89_10980 PF04717 Type VI secretion system, phage-baseplate injector C0L89_10985 PF03377 TAL effector repeat C0L89_10990 PF03377 TAL effector repeat C0L89_10995 PF03377 TAL effector repeat C0L89_11015 PF00975 Thioesterase domain C0L89_11015 PF00550 Phosphopantetheine attachment site C0L89_11015 PF00668 Condensation domain C0L89_11015 PF13193 AMP-binding enzyme C-terminal domain C0L89_11015 PF00501 AMP-binding enzyme C0L89_11020 PF13340 Putative transposase of IS4/5 family (DUF4096) C0L89_11025 PF00550 Phosphopantetheine attachment site C0L89_11025 PF00668 Condensation domain C0L89_11025 PF13193 AMP-binding enzyme C-terminal domain C0L89_11025 PF00501 AMP-binding enzyme C0L89_11030 PF00550 Phosphopantetheine attachment site C0L89_11030 PF00501 AMP-binding enzyme C0L89_11030 PF00668 Condensation domain C0L89_11030 PF13193 AMP-binding enzyme C-terminal domain C0L89_11035 PF00501 AMP-binding enzyme C0L89_11035 PF00668 Condensation domain C0L89_11035 PF13193 AMP-binding enzyme C-terminal domain C0L89_11035 PF00550 Phosphopantetheine attachment site C0L89_11040 PF13193 AMP-binding enzyme C-terminal domain C0L89_11040 PF00501 AMP-binding enzyme C0L89_11040 PF00975 Thioesterase domain C0L89_11040 PF00550 Phosphopantetheine attachment site C0L89_11040 PF00668 Condensation domain C0L89_11045 PF00550 Phosphopantetheine attachment site C0L89_11045 PF13193 AMP-binding enzyme C-terminal domain C0L89_11045 PF00501 AMP-binding enzyme C0L89_11045 PF00668 Condensation domain C0L89_11045 PF00975 Thioesterase domain C0L89_11050 PF00550 Phosphopantetheine attachment site C0L89_11050 PF00501 AMP-binding enzyme C0L89_11050 PF13193 AMP-binding enzyme C-terminal domain C0L89_11050 PF00668 Condensation domain C0L89_11050 PF00975 Thioesterase domain C0L89_11050 PF00975 Thioesterase domain C0L89_11050 PF00501 AMP-binding enzyme C0L89_11050 PF13193 AMP-binding enzyme C-terminal domain C0L89_11050 PF00550 Phosphopantetheine attachment site C0L89_11050 PF00668 Condensation domain C0L89_11060 PF02797 Chalcone and stilbene synthases, C-terminal domain C0L89_11060 PF00195 Chalcone and stilbene synthases, N-terminal domain C0L89_11070 PF00378 Enoyl-CoA hydratase/isomerase C0L89_11075 PF00155 Aminotransferase class I and II C0L89_11080 PF00378 Enoyl-CoA hydratase/isomerase C0L89_11085 PF00005 ABC transporter C0L89_11085 PF00664 ABC transporter transmembrane region C0L89_11090 PF03621 MbtH-like protein C0L89_11095 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain C0L89_11095 PF12706 Beta-lactamase superfamily domain C0L89_11110 PF01609 Transposase DDE domain C0L89_11110 PF05598 Transposase domain (DUF772) C0L89_11125 PF00873 AcrB/AcrD/AcrF family C0L89_11130 PF00529 HlyD membrane-fusion protein of T1SS C0L89_11130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C0L89_11175 PF00486 Transcriptional regulatory protein, C terminal C0L89_11175 PF00072 Response regulator receiver domain C0L89_11180 PF00034 Cytochrome c C0L89_11180 PF03150 Di-haem cytochrome c peroxidase C0L89_11185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_11185 PF00512 His Kinase A (phospho-acceptor) domain C0L89_11190 PF03466 LysR substrate binding domain C0L89_11190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L89_11210 PF03793 PASTA domain C0L89_11210 PF00069 Protein kinase domain C0L89_11250 PF04717 Type VI secretion system, phage-baseplate injector C0L89_11250 PF16671 Actin cross-linking domain C0L89_11270 PF05598 Transposase domain (DUF772) C0L89_11280 PF05598 Transposase domain (DUF772) C0L89_11280 PF01609 Transposase DDE domain C0L89_11290 PF10431 C-terminal, D2-small domain, of ClpB protein C0L89_11290 PF17871 AAA lid domain C0L89_11290 PF07724 AAA domain (Cdc48 subfamily) C0L89_11290 PF00004 ATPase family associated with various cellular activities (AAA) C0L89_11315 PF05638 Type VI secretion system effector, Hcp C0L89_11365 PF05598 Transposase domain (DUF772) C0L89_11365 PF01609 Transposase DDE domain C0L89_11375 PF01106 NifU-like domain C0L89_11380 PF01329 Pterin 4 alpha carbinolamine dehydratase C0L89_11395 PF11737 Protein of unknown function (DUF3300) C0L89_11400 PF00849 RNA pseudouridylate synthase C0L89_11400 PF01479 S4 domain C0L89_11405 PF00575 S1 RNA binding domain C0L89_11405 PF10150 Ribonuclease E/G family C0L89_11405 PF12111 Polyribonucleotide phosphorylase C terminal C0L89_11415 PF00196 Bacterial regulatory proteins, luxR family C0L89_11415 PF00072 Response regulator receiver domain C0L89_11430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C0L89_11440 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C0L89_11440 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C0L89_11440 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C0L89_11450 PF17837 4'-phosphopantetheinyl transferase N-terminal domain C0L89_11450 PF01648 4'-phosphopantetheinyl transferase superfamily C0L89_11475 PF01066 CDP-alcohol phosphatidyltransferase C0L89_11480 PF01541 GIY-YIG catalytic domain C0L89_11480 PF02151 UvrB/uvrC motif C0L89_11480 PF08459 UvrC Helix-hairpin-helix N-terminal C0L89_11490 PF01451 Low molecular weight phosphotyrosine protein phosphatase C0L89_11495 PF02348 Cytidylyltransferase C0L89_11500 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C0L89_11505 PF00005 ABC transporter C0L89_11505 PF00664 ABC transporter transmembrane region C0L89_11515 PF01618 MotA/TolQ/ExbB proton channel family C0L89_11520 PF03772 Competence protein C0L89_11520 PF00753 Metallo-beta-lactamase superfamily C0L89_11535 PF00005 ABC transporter C0L89_11540 PF12704 MacB-like periplasmic core domain C0L89_11540 PF02687 FtsX-like permease family C0L89_11550 PF03937 Flavinator of succinate dehydrogenase C0L89_11555 PF13085 2Fe-2S iron-sulfur cluster binding domain C0L89_11565 PF02910 Fumarate reductase flavoprotein C-term C0L89_11565 PF00890 FAD binding domain C0L89_11570 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C0L89_11575 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C0L89_11585 PF01571 Aminomethyltransferase folate-binding domain C0L89_11595 PF00005 ABC transporter C0L89_11595 PF17912 MalK OB fold domain C0L89_11600 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain C0L89_11600 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain C0L89_11605 PF02685 Glucokinase C0L89_11610 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C0L89_11615 PF00920 Dehydratase family C0L89_11620 PF01081 KDPG and KHG aldolase C0L89_11640 PF00873 AcrB/AcrD/AcrF family C0L89_11655 PF00034 Cytochrome c C0L89_11700 PF00072 Response regulator receiver domain C0L89_11700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_11700 PF00512 His Kinase A (phospho-acceptor) domain C0L89_11700 PF09308 LuxQ, periplasmic C0L89_11715 PF16921 Tex protein YqgF-like domain C0L89_11715 PF17674 HHH domain C0L89_11715 PF09371 Tex-like protein N-terminal domain C0L89_11715 PF00575 S1 RNA binding domain C0L89_11725 PF01266 FAD dependent oxidoreductase C0L89_11725 PF00355 Rieske [2Fe-2S] domain C0L89_11740 PF00561 alpha/beta hydrolase fold C0L89_11750 PF01066 CDP-alcohol phosphatidyltransferase C0L89_11770 PF03618 Kinase/pyrophosphorylase C0L89_11775 PF02896 PEP-utilising enzyme, TIM barrel domain C0L89_11775 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C0L89_11775 PF00391 PEP-utilising enzyme, mobile domain C0L89_11780 PF05552 Conserved TM helix C0L89_11780 PF00924 Mechanosensitive ion channel C0L89_11785 PF00929 Exonuclease C0L89_11790 PF14437 MafB19-like deaminase C0L89_11795 PF01325 Iron dependent repressor, N-terminal DNA binding domain C0L89_11795 PF02742 Iron dependent repressor, metal binding and dimerisation domain C0L89_11800 PF01566 Natural resistance-associated macrophage protein C0L89_11830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L89_11830 PF03466 LysR substrate binding domain C0L89_11835 PF03601 Conserved hypothetical protein 698 C0L89_11855 PF03466 LysR substrate binding domain C0L89_11855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L89_11860 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C0L89_11860 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus C0L89_11860 PF00361 Proton-conducting membrane transporter C0L89_11865 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) C0L89_11870 PF00958 GMP synthase C terminal domain C0L89_11870 PF02540 NAD synthase C0L89_11870 PF00117 Glutamine amidotransferase class-I C0L89_11875 PF00478 IMP dehydrogenase / GMP reductase domain C0L89_11875 PF00571 CBS domain C0L89_11880 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C0L89_11880 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C0L89_11895 PF00483 Nucleotidyl transferase C0L89_11900 PF02719 Polysaccharide biosynthesis protein C0L89_11905 PF00953 Glycosyl transferase family 4 C0L89_11910 PF18073 Rubredoxin metal binding domain C0L89_11920 PF00216 Bacterial DNA-binding protein C0L89_11925 PF00575 S1 RNA binding domain C0L89_11930 PF02224 Cytidylate kinase C0L89_11935 PF00444 Ribosomal protein L36 C0L89_11945 PF04371 Porphyromonas-type peptidyl-arginine deiminase C0L89_11955 PF00795 Carbon-nitrogen hydrolase C0L89_11980 PF00528 Binding-protein-dependent transport system inner membrane component C0L89_11985 PF00528 Binding-protein-dependent transport system inner membrane component C0L89_12005 PF00356 Bacterial regulatory proteins, lacI family C0L89_12015 PF03795 YCII-related domain C0L89_12020 PF02616 Segregation and condensation protein ScpA C0L89_12025 PF04079 Segregation and condensation complex subunit ScpB C0L89_12030 PF00849 RNA pseudouridylate synthase C0L89_12030 PF01479 S4 domain C0L89_12045 PF00795 Carbon-nitrogen hydrolase C0L89_12050 PF00155 Aminotransferase class I and II C0L89_12055 PF00005 ABC transporter C0L89_12060 PF03379 CcmB protein C0L89_12065 PF01578 Cytochrome C assembly protein C0L89_12075 PF03100 CcmE C0L89_12080 PF01578 Cytochrome C assembly protein C0L89_12080 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal C0L89_12085 PF08534 Redoxin C0L89_12090 PF03918 Cytochrome C biogenesis protein C0L89_12100 PF00561 alpha/beta hydrolase fold C0L89_12105 PF00313 'Cold-shock' DNA-binding domain C0L89_12115 PF00005 ABC transporter C0L89_12115 PF00664 ABC transporter transmembrane region C0L89_12120 PF00664 ABC transporter transmembrane region C0L89_12120 PF00005 ABC transporter C0L89_12130 PF01654 Cytochrome bd terminal oxidase subunit I C0L89_12160 PF02129 X-Pro dipeptidyl-peptidase (S15 family) C0L89_12160 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain C0L89_12165 PF00171 Aldehyde dehydrogenase family C0L89_12170 PF01472 PUA domain C0L89_12170 PF00696 Amino acid kinase family C0L89_12185 PF00206 Lyase C0L89_12190 PF01118 Semialdehyde dehydrogenase, NAD binding domain C0L89_12200 PF00696 Amino acid kinase family C0L89_12200 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase C0L89_12205 PF01546 Peptidase family M20/M25/M40 C0L89_12205 PF07687 Peptidase dimerisation domain C0L89_12210 PF00764 Arginosuccinate synthase C0L89_12215 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C0L89_12215 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C0L89_12225 PF01406 tRNA synthetases class I (C) catalytic domain C0L89_12225 PF09190 DALR domain C0L89_12230 PF02657 Fe-S metabolism associated domain C0L89_12245 PF01258 Prokaryotic dksA/traR C4-type zinc finger C0L89_12250 PF01809 Putative membrane protein insertion efficiency factor C0L89_12255 PF01979 Amidohydrolase family C0L89_12260 PF08460 Bacterial SH3 domain C0L89_12260 PF01551 Peptidase family M23 C0L89_12270 PF05985 Ethanolamine ammonia-lyase light chain (EutC) C0L89_12285 PF01095 Pectinesterase C0L89_12290 PF13936 Helix-turn-helix domain C0L89_12290 PF00665 Integrase core domain C0L89_12295 PF00295 Glycosyl hydrolases family 28 C0L89_12310 PF13419 Haloacid dehalogenase-like hydrolase C0L89_12320 PF01979 Amidohydrolase family C0L89_12335 PF01132 Elongation factor P (EF-P) OB domain C0L89_12335 PF08207 Elongation factor P (EF-P) KOW-like domain C0L89_12335 PF09285 Elongation factor P, C-terminal C0L89_12340 PF04055 Radical SAM superfamily C0L89_12345 PF13188 PAS domain C0L89_12345 PF00563 EAL domain C0L89_12345 PF00990 Diguanylate cyclase, GGDEF domain C0L89_12345 PF03707 Bacterial signalling protein N terminal repeat C0L89_12355 PF00588 SpoU rRNA Methylase family C0L89_12360 PF00459 Inositol monophosphatase family C0L89_12365 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C0L89_12365 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C0L89_12370 PF00545 ribonuclease C0L89_12395 PF00270 DEAD/DEAH box helicase C0L89_12395 PF00271 Helicase conserved C-terminal domain C0L89_12395 PF03880 DbpA RNA binding domain C0L89_12400 PF00156 Phosphoribosyl transferase domain C0L89_12405 PF02696 Uncharacterized ACR, YdiU/UPF0061 family C0L89_12415 PF02798 Glutathione S-transferase, N-terminal domain C0L89_12415 PF14497 Glutathione S-transferase, C-terminal domain C0L89_12420 PF00313 'Cold-shock' DNA-binding domain C0L89_12425 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 C0L89_12430 PF07152 YaeQ protein C0L89_12440 PF00563 EAL domain C0L89_12440 PF00498 FHA domain C0L89_12440 PF00990 Diguanylate cyclase, GGDEF domain C0L89_12445 PF01435 Peptidase family M48 C0L89_12450 PF00749 tRNA synthetases class I (E and Q), catalytic domain C0L89_12455 PF00106 short chain dehydrogenase C0L89_12460 PF05233 PHB accumulation regulatory domain C0L89_12460 PF07879 PHB/PHA accumulation regulator DNA-binding domain C0L89_12475 PF01119 DNA mismatch repair protein, C-terminal domain C0L89_12475 PF08676 MutL C terminal dimerisation domain C0L89_12480 PF11741 AMIN domain C0L89_12480 PF01520 N-acetylmuramoyl-L-alanine amidase C0L89_12485 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C0L89_12490 PF03853 YjeF-related protein N-terminus C0L89_12490 PF01256 Carbohydrate kinase C0L89_12495 PF08331 Domain of unknown function (DUF1730) C0L89_12500 PF13742 OB-fold nucleic acid binding domain C0L89_12500 PF02601 Exonuclease VII, large subunit C0L89_12515 PF05598 Transposase domain (DUF772) C0L89_12515 PF01609 Transposase DDE domain C0L89_12525 PF03781 Sulfatase-modifying factor enzyme 1 C0L89_12540 PF00570 HRDC domain C0L89_12540 PF01612 3'-5' exonuclease C0L89_12575 PF01584 CheW-like domain C0L89_12580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0L89_12580 PF00672 HAMP domain C0L89_12580 PF02743 Cache domain C0L89_12610 PF04386 Stringent starvation protein B C0L89_12615 PF02798 Glutathione S-transferase, N-terminal domain C0L89_12615 PF00043 Glutathione S-transferase, C-terminal domain C0L89_12620 PF02167 Cytochrome C1 family C0L89_12625 PF00033 Cytochrome b/b6/petB C0L89_12625 PF00032 Cytochrome b(C-terminal)/b6/petD C0L89_12630 PF00355 Rieske [2Fe-2S] domain C0L89_12630 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal C0L89_12640 PF01464 Transglycosylase SLT domain C0L89_12660 PF04055 Radical SAM superfamily C0L89_12660 PF00919 Uncharacterized protein family UPF0004 C0L89_12660 PF01938 TRAM domain C0L89_12665 PF02562 PhoH-like protein C0L89_12675 PF02130 Uncharacterized protein family UPF0054 C0L89_12685 PF03471 Transporter associated domain C0L89_12685 PF00571 CBS domain C0L89_12700 PF00171 Aldehyde dehydrogenase family C0L89_12705 PF00528 Binding-protein-dependent transport system inner membrane component C0L89_12710 PF00528 Binding-protein-dependent transport system inner membrane component C0L89_12720 PF08402 TOBE domain C0L89_12720 PF00005 ABC transporter C0L89_12725 PF02321 Outer membrane efflux protein C0L89_12730 PF07690 Major Facilitator Superfamily C0L89_12735 PF13533 Biotin-lipoyl like C0L89_12750 PF01609 Transposase DDE domain C0L89_12750 PF05598 Transposase domain (DUF772) C0L89_12765 PF00120 Glutamine synthetase, catalytic domain C0L89_12775 PF00120 Glutamine synthetase, catalytic domain C0L89_12780 PF01266 FAD dependent oxidoreductase C0L89_12785 PF00990 Diguanylate cyclase, GGDEF domain C0L89_12785 PF00072 Response regulator receiver domain C0L89_12790 PF07690 Major Facilitator Superfamily C0L89_12790 PF00083 Sugar (and other) transporter C0L89_12800 PF00384 Molybdopterin oxidoreductase C0L89_12805 PF02634 FdhD/NarQ family C0L89_12810 PF07690 Major Facilitator Superfamily C0L89_12820 PF00202 Aminotransferase class-III C0L89_12825 PF00005 ABC transporter C0L89_12835 PF04286 Protein of unknown function (DUF445) C0L89_12840 PF00512 His Kinase A (phospho-acceptor) domain C0L89_12840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_12840 PF01627 Hpt domain C0L89_12840 PF00072 Response regulator receiver domain C0L89_12840 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C0L89_12840 PF00672 HAMP domain C0L89_12850 PF01609 Transposase DDE domain C0L89_12850 PF05598 Transposase domain (DUF772) C0L89_12855 PF05088 Bacterial NAD-glutamate dehydrogenase C0L89_12865 PF00529 HlyD membrane-fusion protein of T1SS C0L89_12865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C0L89_12870 PF00873 AcrB/AcrD/AcrF family C0L89_12885 PF00356 Bacterial regulatory proteins, lacI family C0L89_12890 PF02896 PEP-utilising enzyme, TIM barrel domain C0L89_12890 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C0L89_12890 PF00381 PTS HPr component phosphorylation site C0L89_12890 PF00391 PEP-utilising enzyme, mobile domain C0L89_12890 PF05524 PEP-utilising enzyme, N-terminal C0L89_12895 PF00294 pfkB family carbohydrate kinase C0L89_12900 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C0L89_12910 PF04717 Type VI secretion system, phage-baseplate injector C0L89_12910 PF16671 Actin cross-linking domain C0L89_12925 PF00665 Integrase core domain C0L89_12925 PF13936 Helix-turn-helix domain C0L89_12940 PF05598 Transposase domain (DUF772) C0L89_12945 PF05598 Transposase domain (DUF772) C0L89_12965 PF02355 Protein export membrane protein C0L89_12965 PF07549 SecD/SecF GG Motif C0L89_12970 PF02355 Protein export membrane protein C0L89_12970 PF07549 SecD/SecF GG Motif C0L89_12970 PF13721 SecD export protein N-terminal TM region C0L89_12975 PF02699 Preprotein translocase subunit C0L89_12980 PF01702 Queuine tRNA-ribosyltransferase C0L89_12985 PF02547 Queuosine biosynthesis protein C0L89_13050 PF00037 4Fe-4S binding domain C0L89_13065 PF01467 Cytidylyltransferase-like C0L89_13075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_13075 PF00183 Hsp90 protein C0L89_13085 PF05598 Transposase domain (DUF772) C0L89_13110 PF04616 Glycosyl hydrolases family 43 C0L89_13115 PF07532 Bacterial Ig-like domain (group 4) C0L89_13120 PF07715 TonB-dependent Receptor Plug Domain C0L89_13120 PF00593 TonB dependent receptor C0L89_13135 PF00082 Subtilase family C0L89_13135 PF09286 Pro-kumamolisin, activation domain C0L89_13170 PF13520 Amino acid permease C0L89_13185 PF01321 Creatinase/Prolidase N-terminal domain C0L89_13185 PF00557 Metallopeptidase family M24 C0L89_13190 PF00171 Aldehyde dehydrogenase family C0L89_13195 PF00701 Dihydrodipicolinate synthetase family C0L89_13200 PF04324 BFD-like [2Fe-2S] binding domain C0L89_13200 PF07992 Pyridine nucleotide-disulphide oxidoreductase C0L89_13210 PF01266 FAD dependent oxidoreductase C0L89_13215 PF05544 Proline racemase C0L89_13225 PF00448 SRP54-type protein, GTPase domain C0L89_13225 PF02881 SRP54-type protein, helical bundle domain C0L89_13240 PF14815 NUDIX domain C0L89_13240 PF00730 HhH-GPD superfamily base excision DNA repair protein C0L89_13240 PF00633 Helix-hairpin-helix motif C0L89_13240 PF10576 Iron-sulfur binding domain of endonuclease III C0L89_13245 PF04362 Bacterial Fe(2+) trafficking C0L89_13250 PF00072 Response regulator receiver domain C0L89_13250 PF13426 PAS domain C0L89_13250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_13280 PF08212 Lipocalin-like domain C0L89_13290 PF12806 Acetyl-CoA dehydrogenase C-terminal like C0L89_13290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C0L89_13290 PF02770 Acyl-CoA dehydrogenase, middle domain C0L89_13290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C0L89_13300 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C0L89_13300 PF02779 Transketolase, pyrimidine binding domain C0L89_13300 PF02780 Transketolase, C-terminal domain C0L89_13320 PF03808 Glycosyl transferase WecB/TagA/CpsF family C0L89_13335 PF14667 Polysaccharide biosynthesis C-terminal domain C0L89_13345 PF13439 Glycosyltransferase Family 4 C0L89_13345 PF00534 Glycosyl transferases group 1 C0L89_13365 PF02397 Bacterial sugar transferase C0L89_13385 PF13411 MerR HTH family regulatory protein C0L89_13390 PF00216 Bacterial DNA-binding protein C0L89_13395 PF03147 Ferredoxin-fold anticodon binding domain C0L89_13395 PF03483 B3/4 domain C0L89_13395 PF03484 tRNA synthetase B5 domain C0L89_13395 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C0L89_13395 PF01588 Putative tRNA binding domain C0L89_13400 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C0L89_13400 PF01409 tRNA synthetases class II core domain (F) C0L89_13405 PF00453 Ribosomal protein L20 C0L89_13410 PF01632 Ribosomal protein L35 C0L89_13415 PF00707 Translation initiation factor IF-3, C-terminal domain C0L89_13415 PF05198 Translation initiation factor IF-3, N-terminal domain C0L89_13420 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C0L89_13420 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C0L89_13420 PF02824 TGS domain C0L89_13420 PF03129 Anticodon binding domain C0L89_13435 PF00521 DNA gyrase/topoisomerase IV, subunit A C0L89_13435 PF03989 DNA gyrase C-terminal domain, beta-propeller C0L89_13440 PF01008 Initiation factor 2 subunit family C0L89_13455 PF00152 tRNA synthetases class II (D, K and N) C0L89_13460 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C0L89_13460 PF12826 Helix-hairpin-helix motif C0L89_13460 PF00533 BRCA1 C Terminus (BRCT) domain C0L89_13460 PF03120 NAD-dependent DNA ligase OB-fold domain C0L89_13460 PF01653 NAD-dependent DNA ligase adenylation domain C0L89_13465 PF00155 Aminotransferase class I and II C0L89_13470 PF04354 ZipA, C-terminal FtsZ-binding domain C0L89_13475 PF02463 RecF/RecN/SMC N terminal domain C0L89_13480 PF01281 Ribosomal protein L9, N-terminal domain C0L89_13480 PF03948 Ribosomal protein L9, C-terminal domain C0L89_13485 PF01084 Ribosomal protein S18 C0L89_13490 PF01250 Ribosomal protein S6 C0L89_13495 PF01521 Iron-sulphur cluster biosynthesis C0L89_13505 PF00152 tRNA synthetases class II (D, K and N) C0L89_13505 PF01336 OB-fold nucleic acid binding domain C0L89_13530 PF00484 Carbonic anhydrase C0L89_13535 PF06052 3-hydroxyanthranilic acid dioxygenase C0L89_13555 PF00266 Aminotransferase class-V C0L89_13560 PF01494 FAD binding domain C0L89_13565 PF08411 Exonuclease C-terminal C0L89_13565 PF00929 Exonuclease C0L89_13575 PF00248 Aldo/keto reductase family C0L89_13590 PF01513 ATP-NAD kinase C0L89_13605 PF01170 Putative RNA methylase family UPF0020 C0L89_13605 PF02926 THUMP domain C0L89_13605 PF10672 S-adenosylmethionine-dependent methyltransferase C0L89_13645 PF00581 Rhodanese-like domain C0L89_13650 PF00293 NUDIX domain C0L89_13655 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C0L89_13655 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C0L89_13660 PF00378 Enoyl-CoA hydratase/isomerase C0L89_13670 PF00730 HhH-GPD superfamily base excision DNA repair protein C0L89_13670 PF00633 Helix-hairpin-helix motif C0L89_13670 PF10576 Iron-sulfur binding domain of endonuclease III C0L89_13675 PF00916 Sulfate permease family C0L89_13675 PF01740 STAS domain C0L89_13680 PF00484 Carbonic anhydrase C0L89_13695 PF12849 PBP superfamily domain C0L89_13700 PF12849 PBP superfamily domain C0L89_13705 PF00528 Binding-protein-dependent transport system inner membrane component C0L89_13710 PF00528 Binding-protein-dependent transport system inner membrane component C0L89_13715 PF00005 ABC transporter C0L89_13720 PF01895 PhoU domain C0L89_13730 PF00929 Exonuclease C0L89_13740 PF08032 RNA 2'-O ribose methyltransferase substrate binding C0L89_13740 PF00588 SpoU rRNA Methylase family C0L89_13755 PF08461 Ribonuclease R winged-helix domain C0L89_13755 PF00575 S1 RNA binding domain C0L89_13755 PF00773 RNB domain C0L89_13755 PF08206 Ribonuclease B OB domain C0L89_13755 PF17876 Cold shock domain C0L89_13785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C0L89_13785 PF02770 Acyl-CoA dehydrogenase, middle domain C0L89_13785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C0L89_13790 PF01209 ubiE/COQ5 methyltransferase family C0L89_13795 PF02574 Homocysteine S-methyltransferase C0L89_13795 PF00809 Pterin binding enzyme C0L89_13800 PF02607 B12 binding domain C0L89_13800 PF02965 Vitamin B12 dependent methionine synthase, activation domain C0L89_13800 PF00809 Pterin binding enzyme C0L89_13800 PF02574 Homocysteine S-methyltransferase C0L89_13800 PF02310 B12 binding domain C0L89_13810 PF00294 pfkB family carbohydrate kinase C0L89_13815 PF07690 Major Facilitator Superfamily C0L89_13835 PF04102 SlyX C0L89_13840 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C0L89_13840 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C0L89_13840 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C0L89_13845 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C0L89_13845 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C0L89_13850 PF00255 Glutathione peroxidase C0L89_13860 PF00392 Bacterial regulatory proteins, gntR family C0L89_13865 PF00005 ABC transporter C0L89_13895 PF00206 Lyase C0L89_13895 PF10415 Fumarase C C-terminus C0L89_13905 PF05598 Transposase domain (DUF772) C0L89_13905 PF01609 Transposase DDE domain C0L89_13920 PF00206 Lyase C0L89_13920 PF08328 Adenylosuccinate lyase C-terminal C0L89_13935 PF08007 Cupin superfamily protein C0L89_13945 PF02779 Transketolase, pyrimidine binding domain C0L89_13945 PF16870 2-oxoglutarate dehydrogenase C-terminal C0L89_13945 PF16078 2-oxoglutarate dehydrogenase N-terminus C0L89_13945 PF00676 Dehydrogenase E1 component C0L89_13950 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C0L89_13950 PF00364 Biotin-requiring enzyme C0L89_13950 PF02817 e3 binding domain C0L89_13955 PF07992 Pyridine nucleotide-disulphide oxidoreductase C0L89_13955 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C0L89_13960 PF03641 Possible lysine decarboxylase C0L89_13965 PF01205 Uncharacterized protein family UPF0029 C0L89_13970 PF00664 ABC transporter transmembrane region C0L89_13970 PF00005 ABC transporter C0L89_14000 PF08543 Phosphomethylpyrimidine kinase C0L89_14010 PF01556 DnaJ C terminal domain C0L89_14010 PF00226 DnaJ domain C0L89_14010 PF00684 DnaJ central domain C0L89_14015 PF00012 Hsp70 protein C0L89_14020 PF01025 GrpE C0L89_14025 PF01628 HrcA protein C terminal domain C0L89_14025 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding C0L89_14030 PF02463 RecF/RecN/SMC N terminal domain C0L89_14035 PF01475 Ferric uptake regulator family C0L89_14040 PF04355 SmpA / OmlA family C0L89_14050 PF03658 RnfH family Ubiquitin C0L89_14060 PF01668 SmpB protein C0L89_14065 PF00082 Subtilase family C0L89_14085 PF01609 Transposase DDE domain C0L89_14085 PF05598 Transposase domain (DUF772) C0L89_14090 PF05598 Transposase domain (DUF772) C0L89_14130 PF01053 Cys/Met metabolism PLP-dependent enzyme C0L89_14140 PF07722 Peptidase C26 C0L89_14145 PF01810 LysE type translocator C0L89_14150 PF04204 Homoserine O-succinyltransferase C0L89_14155 PF00120 Glutamine synthetase, catalytic domain C0L89_14165 PF05598 Transposase domain (DUF772) C0L89_14200 PF00990 Diguanylate cyclase, GGDEF domain C0L89_14200 PF08448 PAS fold C0L89_14215 PF00691 OmpA family C0L89_14215 PF05736 OprF membrane domain C0L89_14235 PF00875 DNA photolyase C0L89_14235 PF03441 FAD binding domain of DNA photolyase C0L89_14240 PF03796 DnaB-like helicase C terminal domain C0L89_14240 PF00772 DnaB-like helicase N terminal domain C0L89_14245 PF03358 NADPH-dependent FMN reductase C0L89_14250 PF13537 Glutamine amidotransferase domain C0L89_14250 PF00733 Asparagine synthase C0L89_14255 PF13417 Glutathione S-transferase, N-terminal domain C0L89_14280 PF01026 TatD related DNase C0L89_14285 PF00899 ThiF family C0L89_14300 PF00313 'Cold-shock' DNA-binding domain C0L89_14325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0L89_14325 PF00672 HAMP domain C0L89_14325 PF02203 Tar ligand binding domain homologue C0L89_14330 PF05598 Transposase domain (DUF772) C0L89_14340 PF01609 Transposase DDE domain C0L89_14340 PF05598 Transposase domain (DUF772) C0L89_14350 PF05598 Transposase domain (DUF772) C0L89_14350 PF01609 Transposase DDE domain C0L89_14365 PF05683 Fumarase C-terminus C0L89_14365 PF05681 Fumarate hydratase (Fumerase) C0L89_14375 PF00005 ABC transporter C0L89_14380 PF00175 Oxidoreductase NAD-binding domain C0L89_14380 PF00970 Oxidoreductase FAD-binding domain C0L89_14385 PF00255 Glutathione peroxidase C0L89_14415 PF04542 Sigma-70 region 2 C0L89_14415 PF08281 Sigma-70, region 4 C0L89_14425 PF12802 MarR family C0L89_14460 PF00933 Glycosyl hydrolase family 3 N terminal domain C0L89_14460 PF14310 Fibronectin type III-like domain C0L89_14460 PF01915 Glycosyl hydrolase family 3 C-terminal domain C0L89_14485 PF07690 Major Facilitator Superfamily C0L89_14490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C0L89_14490 PF00529 HlyD membrane-fusion protein of T1SS C0L89_14495 PF02321 Outer membrane efflux protein C0L89_14505 PF12833 Helix-turn-helix domain C0L89_14510 PF00521 DNA gyrase/topoisomerase IV, subunit A C0L89_14510 PF03989 DNA gyrase C-terminal domain, beta-propeller C0L89_14520 PF00210 Ferritin-like domain C0L89_14525 PF01804 Penicillin amidase C0L89_14535 PF07715 TonB-dependent Receptor Plug Domain C0L89_14535 PF00593 TonB dependent receptor C0L89_14545 PF00733 Asparagine synthase C0L89_14545 PF13537 Glutamine amidotransferase domain C0L89_14560 PF03960 ArsC family C0L89_14570 PF00132 Bacterial transferase hexapeptide (six repeats) C0L89_14570 PF14602 Hexapeptide repeat of succinyl-transferase C0L89_14570 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal C0L89_14575 PF01966 HD domain C0L89_14575 PF08335 GlnD PII-uridylyltransferase C0L89_14575 PF01909 Nucleotidyltransferase domain C0L89_14580 PF00557 Metallopeptidase family M24 C0L89_14615 PF00318 Ribosomal protein S2 C0L89_14620 PF00889 Elongation factor TS C0L89_14630 PF00696 Amino acid kinase family C0L89_14635 PF01765 Ribosome recycling factor C0L89_14640 PF01255 Putative undecaprenyl diphosphate synthase C0L89_14650 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C0L89_14650 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C0L89_14650 PF13288 DXP reductoisomerase C-terminal domain C0L89_14655 PF02163 Peptidase family M50 C0L89_14655 PF17820 PDZ domain C0L89_14660 PF01103 Surface antigen C0L89_14660 PF07244 Surface antigen variable number repeat C0L89_14670 PF00132 Bacterial transferase hexapeptide (six repeats) C0L89_14670 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C0L89_14675 PF07977 FabA-like domain C0L89_14680 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C0L89_14680 PF00132 Bacterial transferase hexapeptide (six repeats) C0L89_14685 PF02684 Lipid-A-disaccharide synthetase C0L89_14690 PF01351 Ribonuclease HII C0L89_14695 PF01336 OB-fold nucleic acid binding domain C0L89_14695 PF07733 Bacterial DNA polymerase III alpha NTPase domain C0L89_14695 PF02811 PHP domain C0L89_14695 PF14579 Helix-hairpin-helix motif C0L89_14695 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C0L89_14700 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C0L89_14775 PF02592 Putative vitamin uptake transporter C0L89_14790 PF02574 Homocysteine S-methyltransferase C0L89_14795 PF00324 Amino acid permease C0L89_14800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C0L89_14810 PF01588 Putative tRNA binding domain C0L89_14810 PF09334 tRNA synthetases class I (M) C0L89_14820 PF04060 Putative Fe-S cluster C0L89_14840 PF04542 Sigma-70 region 2 C0L89_14840 PF04545 Sigma-70, region 4 C0L89_14885 PF01042 Endoribonuclease L-PSP C0L89_14895 PF09924 Uncharacterised conserved protein (DUF2156) C0L89_14895 PF03706 Lysylphosphatidylglycerol synthase TM region C0L89_14935 PF07690 Major Facilitator Superfamily C0L89_14940 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C0L89_14955 PF03831 PhnA domain C0L89_14955 PF08274 PhnA Zinc-Ribbon C0L89_14965 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C0L89_14995 PF08281 Sigma-70, region 4 C0L89_14995 PF04542 Sigma-70 region 2 C0L89_14995 PF12680 SnoaL-like domain C0L89_15005 PF01258 Prokaryotic dksA/traR C4-type zinc finger C0L89_15015 PF07043 Protein of unknown function (DUF1328) C0L89_15020 PF01863 Protein of unknown function DUF45 C0L89_15030 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C0L89_15030 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C0L89_15035 PF12951 Passenger-associated-transport-repeat C0L89_15035 PF03797 Autotransporter beta-domain C0L89_15035 PF00082 Subtilase family C0L89_15040 PF02803 Thiolase, C-terminal domain C0L89_15040 PF00108 Thiolase, N-terminal domain C0L89_15055 PF00990 Diguanylate cyclase, GGDEF domain C0L89_15055 PF00072 Response regulator receiver domain C0L89_15070 PF01068 ATP dependent DNA ligase domain C0L89_15070 PF04675 DNA ligase N terminus C0L89_15070 PF04679 ATP dependent DNA ligase C terminal region C0L89_15080 PF04679 ATP dependent DNA ligase C terminal region C0L89_15080 PF01068 ATP dependent DNA ligase domain C0L89_15080 PF04675 DNA ligase N terminus C0L89_15085 PF00271 Helicase conserved C-terminal domain C0L89_15085 PF08494 DEAD/H associated C0L89_15085 PF00270 DEAD/DEAH box helicase C0L89_15105 PF00313 'Cold-shock' DNA-binding domain C0L89_15110 PF01048 Phosphorylase superfamily C0L89_15120 PF00933 Glycosyl hydrolase family 3 N terminal domain C0L89_15125 PF04244 Deoxyribodipyrimidine photo-lyase-related protein C0L89_15130 PF01593 Flavin containing amine oxidoreductase C0L89_15145 PF05958 tRNA (Uracil-5-)-methyltransferase C0L89_15155 PF02565 Recombination protein O C terminal C0L89_15155 PF11967 Recombination protein O N terminal C0L89_15160 PF01926 50S ribosome-binding GTPase C0L89_15160 PF07650 KH domain C0L89_15165 PF14622 Ribonuclease-III-like C0L89_15165 PF00035 Double-stranded RNA binding motif C0L89_15175 PF10502 Signal peptidase, peptidase S26 C0L89_15180 PF00009 Elongation factor Tu GTP binding domain C0L89_15180 PF03144 Elongation factor Tu domain 2 C0L89_15180 PF06421 GTP-binding protein LepA C-terminus C0L89_15180 PF00679 Elongation factor G C-terminus C0L89_15185 PF13180 PDZ domain C0L89_15195 PF04542 Sigma-70 region 2 C0L89_15195 PF08281 Sigma-70, region 4 C0L89_15200 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C0L89_15200 PF00378 Enoyl-CoA hydratase/isomerase C0L89_15200 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C0L89_15205 PF01545 Cation efflux family C0L89_15210 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C0L89_15210 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C0L89_15215 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C0L89_15215 PF00378 Enoyl-CoA hydratase/isomerase C0L89_15215 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C0L89_15220 PF00378 Enoyl-CoA hydratase/isomerase C0L89_15225 PF02770 Acyl-CoA dehydrogenase, middle domain C0L89_15225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C0L89_15225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C0L89_15230 PF00171 Aldehyde dehydrogenase family C0L89_15235 PF06114 IrrE N-terminal-like domain C0L89_15235 PF01381 Helix-turn-helix C0L89_15235 PF09856 Predicted transcriptional regulator (DUF2083) C0L89_15250 PF05598 Transposase domain (DUF772) C0L89_15275 PF00512 His Kinase A (phospho-acceptor) domain C0L89_15275 PF00672 HAMP domain C0L89_15275 PF00072 Response regulator receiver domain C0L89_15275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_15275 PF17149 Periplasmic sensor domain found in signal transduction proteins C0L89_15275 PF01627 Hpt domain C0L89_15285 PF01627 Hpt domain C0L89_15285 PF17149 Periplasmic sensor domain found in signal transduction proteins C0L89_15285 PF00672 HAMP domain C0L89_15285 PF00512 His Kinase A (phospho-acceptor) domain C0L89_15285 PF00072 Response regulator receiver domain C0L89_15285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_15290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_15290 PF00672 HAMP domain C0L89_15290 PF00512 His Kinase A (phospho-acceptor) domain C0L89_15290 PF01627 Hpt domain C0L89_15290 PF00072 Response regulator receiver domain C0L89_15290 PF17149 Periplasmic sensor domain found in signal transduction proteins C0L89_15295 PF00512 His Kinase A (phospho-acceptor) domain C0L89_15295 PF00072 Response regulator receiver domain C0L89_15295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_15295 PF00672 HAMP domain C0L89_15295 PF17149 Periplasmic sensor domain found in signal transduction proteins C0L89_15295 PF01627 Hpt domain C0L89_15300 PF04264 YceI-like domain C0L89_15325 PF03313 Serine dehydratase alpha chain C0L89_15325 PF03315 Serine dehydratase beta chain C0L89_15335 PF01053 Cys/Met metabolism PLP-dependent enzyme C0L89_15340 PF00561 alpha/beta hydrolase fold C0L89_15345 PF01476 LysM domain C0L89_15345 PF08525 Opacity-associated protein A N-terminal motif C0L89_15345 PF01551 Peptidase family M23 C0L89_15350 PF16658 Class II release factor RF3, C-terminal domain C0L89_15350 PF00009 Elongation factor Tu GTP binding domain C0L89_15355 PF03006 Haemolysin-III related C0L89_15365 PF05598 Transposase domain (DUF772) C0L89_15375 PF00571 CBS domain C0L89_15375 PF00478 IMP dehydrogenase / GMP reductase domain C0L89_15380 PF00535 Glycosyl transferase family 2 C0L89_15385 PF00912 Transglycosylase C0L89_15390 PF01430 Hsp33 protein C0L89_15400 PF07715 TonB-dependent Receptor Plug Domain C0L89_15400 PF00593 TonB dependent receptor C0L89_15405 PF00440 Bacterial regulatory proteins, tetR family C0L89_15410 PF00561 alpha/beta hydrolase fold C0L89_15415 PF09317 Domain of unknown function (DUF1974) C0L89_15415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C0L89_15415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C0L89_15445 PF01597 Glycine cleavage H-protein C0L89_15450 PF08669 Glycine cleavage T-protein C-terminal barrel domain C0L89_15450 PF01571 Aminomethyltransferase folate-binding domain C0L89_15460 PF01145 SPFH domain / Band 7 family C0L89_15460 PF16200 C-terminal region of band_7 C0L89_15470 PF02694 Uncharacterised BCR, YnfA/UPF0060 family C0L89_15475 PF03819 MazG nucleotide pyrophosphohydrolase domain C0L89_15480 PF00459 Inositol monophosphatase family C0L89_15485 PF00293 NUDIX domain C0L89_15490 PF00202 Aminotransferase class-III C0L89_15495 PF04452 RNA methyltransferase C0L89_15500 PF02685 Glucokinase C0L89_15515 PF00704 Glycosyl hydrolases family 18 C0L89_15515 PF01476 LysM domain C0L89_15535 PF14310 Fibronectin type III-like domain C0L89_15535 PF00933 Glycosyl hydrolase family 3 N terminal domain C0L89_15535 PF01915 Glycosyl hydrolase family 3 C-terminal domain C0L89_15535 PF07691 PA14 domain C0L89_15540 PF00005 ABC transporter C0L89_15540 PF03412 Peptidase C39 family C0L89_15540 PF00664 ABC transporter transmembrane region C0L89_15550 PF05598 Transposase domain (DUF772) C0L89_15570 PF07971 Glycosyl hydrolase family 92 C0L89_15570 PF17678 Glycosyl hydrolase family 92 N-terminal domain C0L89_15580 PF01301 Glycosyl hydrolases family 35 C0L89_15615 PF03932 CutC family C0L89_15620 PF01112 Asparaginase C0L89_15630 PF00092 von Willebrand factor type A domain C0L89_15630 PF12450 von Willebrand factor C0L89_15630 PF12034 Domain of unknown function (DUF3520) C0L89_15640 PF13302 Acetyltransferase (GNAT) domain C0L89_15655 PF01584 CheW-like domain C0L89_15655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_15655 PF01627 Hpt domain C0L89_15655 PF00072 Response regulator receiver domain C0L89_15660 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term C0L89_15660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C0L89_15665 PF01584 CheW-like domain C0L89_15670 PF00072 Response regulator receiver domain C0L89_15675 PF00072 Response regulator receiver domain C0L89_15680 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain C0L89_15680 PF02951 Prokaryotic glutathione synthetase, N-terminal domain C0L89_15690 PF03747 ADP-ribosylglycohydrolase C0L89_15695 PF00814 Glycoprotease family C0L89_15700 PF13307 Helicase C-terminal domain C0L89_15700 PF04851 Type III restriction enzyme, res subunit C0L89_15710 PF00905 Penicillin binding protein transpeptidase domain C0L89_15710 PF14814 Bifunctional transglycosylase second domain C0L89_15710 PF00912 Transglycosylase C0L89_15715 PF00535 Glycosyl transferase family 2 C0L89_15725 PF13291 ACT domain C0L89_15725 PF04607 Region found in RelA / SpoT proteins C0L89_15725 PF02824 TGS domain C0L89_15730 PF08042 PqqA family C0L89_15735 PF12706 Beta-lactamase superfamily domain C0L89_15740 PF03070 TENA/THI-4/PQQC family C0L89_15745 PF05402 Coenzyme PQQ synthesis protein D (PqqD) C0L89_15750 PF04055 Radical SAM superfamily C0L89_15750 PF13186 Iron-sulfur cluster-binding domain C0L89_15775 PF11898 Domain of unknown function (DUF3418) C0L89_15775 PF00270 DEAD/DEAH box helicase C0L89_15775 PF04408 Helicase associated domain (HA2) C0L89_15775 PF00271 Helicase conserved C-terminal domain C0L89_15775 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold C0L89_15780 PF00210 Ferritin-like domain C0L89_15795 PF09382 RQC domain C0L89_15795 PF16124 RecQ zinc-binding C0L89_15795 PF00570 HRDC domain C0L89_15795 PF00271 Helicase conserved C-terminal domain C0L89_15795 PF00270 DEAD/DEAH box helicase C0L89_15810 PF05598 Transposase domain (DUF772) C0L89_15810 PF01609 Transposase DDE domain C0L89_15825 PF01479 S4 domain C0L89_15825 PF00849 RNA pseudouridylate synthase C0L89_15860 PF05598 Transposase domain (DUF772) C0L89_15875 PF06508 Queuosine biosynthesis protein QueC C0L89_15885 PF04055 Radical SAM superfamily C0L89_15895 PF00691 OmpA family C0L89_15900 PF04052 TolB amino-terminal domain C0L89_15900 PF07676 WD40-like Beta Propeller Repeat C0L89_15910 PF02472 Biopolymer transport protein ExbD/TolR C0L89_15915 PF01618 MotA/TolQ/ExbB proton channel family C0L89_15920 PF03061 Thioesterase superfamily C0L89_15925 PF05496 Holliday junction DNA helicase RuvB P-loop domain C0L89_15925 PF05491 RuvB C-terminal winged helix domain C0L89_15925 PF17864 RuvB AAA lid domain C0L89_15930 PF02705 K+ potassium transporter C0L89_15935 PF07499 RuvA, C-terminal domain C0L89_15935 PF01330 RuvA N terminal domain C0L89_15940 PF02075 Crossover junction endodeoxyribonuclease RuvC C0L89_15945 PF01709 Transcriptional regulator C0L89_15960 PF00152 tRNA synthetases class II (D, K and N) C0L89_15960 PF01336 OB-fold nucleic acid binding domain C0L89_15960 PF02938 GAD domain C0L89_15975 PF07690 Major Facilitator Superfamily C0L89_15980 PF05506 Domain of unknown function (DUF756) C0L89_15980 PF04185 Phosphoesterase family C0L89_16000 PF03466 LysR substrate binding domain C0L89_16000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L89_16010 PF00005 ABC transporter C0L89_16010 PF12848 ABC transporter C0L89_16015 PF00593 TonB dependent receptor C0L89_16015 PF07715 TonB-dependent Receptor Plug Domain C0L89_16025 PF07715 TonB-dependent Receptor Plug Domain C0L89_16025 PF00593 TonB dependent receptor C0L89_16030 PF00593 TonB dependent receptor C0L89_16030 PF07715 TonB-dependent Receptor Plug Domain C0L89_16040 PF02254 TrkA-N domain C0L89_16040 PF00999 Sodium/hydrogen exchanger family C0L89_16075 PF04273 Putative phosphatase (DUF442) C0L89_16075 PF00753 Metallo-beta-lactamase superfamily C0L89_16085 PF07660 Secretin and TonB N terminus short domain C0L89_16085 PF00593 TonB dependent receptor C0L89_16085 PF07715 TonB-dependent Receptor Plug Domain C0L89_16095 PF04183 IucA / IucC family C0L89_16095 PF06276 Ferric iron reductase FhuF-like transporter C0L89_16100 PF07690 Major Facilitator Superfamily C0L89_16110 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C0L89_16110 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C0L89_16120 PF02654 Cobalamin-5-phosphate synthase C0L89_16130 PF02277 Phosphoribosyltransferase C0L89_16135 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase C0L89_16140 PF00155 Aminotransferase class I and II C0L89_16145 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP C0L89_16145 PF12557 Cob(I)alamin adenosyltransferase N terminal C0L89_16165 PF07715 TonB-dependent Receptor Plug Domain C0L89_16165 PF00593 TonB dependent receptor C0L89_16195 PF10431 C-terminal, D2-small domain, of ClpB protein C0L89_16195 PF02861 Clp amino terminal domain, pathogenicity island component C0L89_16195 PF17871 AAA lid domain C0L89_16195 PF07724 AAA domain (Cdc48 subfamily) C0L89_16195 PF00004 ATPase family associated with various cellular activities (AAA) C0L89_16200 PF01541 GIY-YIG catalytic domain C0L89_16210 PF00488 MutS domain V C0L89_16210 PF05188 MutS domain II C0L89_16210 PF05192 MutS domain III C0L89_16210 PF01624 MutS domain I C0L89_16210 PF05190 MutS family domain IV C0L89_16220 PF00141 Peroxidase C0L89_16225 PF01479 S4 domain C0L89_16230 PF01554 MatE C0L89_16240 PF01245 Ribosomal protein L19 C0L89_16245 PF01746 tRNA (Guanine-1)-methyltransferase C0L89_16250 PF01782 RimM N-terminal domain C0L89_16250 PF05239 PRC-barrel domain C0L89_16255 PF00886 Ribosomal protein S16 C0L89_16280 PF02978 Signal peptide binding domain C0L89_16280 PF00448 SRP54-type protein, GTPase domain C0L89_16280 PF02881 SRP54-type protein, helical bundle domain C0L89_16285 PF01578 Cytochrome C assembly protein C0L89_16290 PF01263 Aldose 1-epimerase C0L89_16295 PF06964 Alpha-L-arabinofuranosidase C-terminal domain C0L89_16310 PF13188 PAS domain C0L89_16310 PF08448 PAS fold C0L89_16310 PF00512 His Kinase A (phospho-acceptor) domain C0L89_16310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_16310 PF00072 Response regulator receiver domain C0L89_16315 PF00512 His Kinase A (phospho-acceptor) domain C0L89_16315 PF00672 HAMP domain C0L89_16315 PF01627 Hpt domain C0L89_16315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_16315 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C0L89_16315 PF00072 Response regulator receiver domain C0L89_16325 PF13581 Histidine kinase-like ATPase domain C0L89_16330 PF01740 STAS domain C0L89_16335 PF08678 Rsbr N terminal C0L89_16335 PF01740 STAS domain C0L89_16345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_16345 PF00183 Hsp90 protein C0L89_16350 PF12833 Helix-turn-helix domain C0L89_16370 PF18073 Rubredoxin metal binding domain C0L89_16390 PF14220 Domain of unknown function (DUF4329) C0L89_16390 PF05593 RHS Repeat C0L89_16390 PF03527 RHS protein C0L89_16400 PF04717 Type VI secretion system, phage-baseplate injector C0L89_16410 PF03626 Prokaryotic Cytochrome C oxidase subunit IV C0L89_16415 PF00510 Cytochrome c oxidase subunit III C0L89_16420 PF00115 Cytochrome C and Quinol oxidase polypeptide I C0L89_16425 PF06481 COX Aromatic Rich Motif C0L89_16425 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C0L89_16435 PF02401 LytB protein C0L89_16440 PF01252 Signal peptidase (SPase) II C0L89_16445 PF06827 Zinc finger found in FPG and IleRS C0L89_16445 PF00133 tRNA synthetases class I (I, L, M and V) C0L89_16445 PF08264 Anticodon-binding domain of tRNA C0L89_16455 PF03023 Lipid II flippase MurJ C0L89_16460 PF01649 Ribosomal protein S20 C0L89_16465 PF01926 50S ribosome-binding GTPase C0L89_16465 PF01018 GTP1/OBG C0L89_16470 PF01016 Ribosomal L27 protein C0L89_16475 PF00829 Ribosomal prokaryotic L21 protein C0L89_16480 PF17755 UvrA DNA-binding domain C0L89_16480 PF17760 UvrA interaction domain C0L89_16480 PF00005 ABC transporter C0L89_16495 PF00378 Enoyl-CoA hydratase/isomerase C0L89_16510 PF04542 Sigma-70 region 2 C0L89_16510 PF08281 Sigma-70, region 4 C0L89_16525 PF04376 Arginine-tRNA-protein transferase, N terminus C0L89_16525 PF04377 Arginine-tRNA-protein transferase, C terminus C0L89_16555 PF00593 TonB dependent receptor C0L89_16555 PF07715 TonB-dependent Receptor Plug Domain C0L89_16565 PF02358 Trehalose-phosphatase C0L89_16570 PF00723 Glycosyl hydrolases family 15 C0L89_16575 PF00982 Glycosyltransferase family 20 C0L89_16580 PF01011 PQQ enzyme repeat C0L89_16610 PF00849 RNA pseudouridylate synthase C0L89_16615 PF13525 Outer membrane lipoprotein C0L89_16620 PF00795 Carbon-nitrogen hydrolase C0L89_16620 PF02540 NAD synthase C0L89_16635 PF02629 CoA binding domain C0L89_16635 PF00549 CoA-ligase C0L89_16640 PF08442 ATP-grasp domain C0L89_16640 PF00549 CoA-ligase C0L89_16645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_16645 PF00512 His Kinase A (phospho-acceptor) domain C0L89_16650 PF02954 Bacterial regulatory protein, Fis family C0L89_16650 PF00072 Response regulator receiver domain C0L89_16650 PF00158 Sigma-54 interaction domain C0L89_16660 PF02661 Fic/DOC family C0L89_16665 PF00437 Type II/IV secretion system protein C0L89_16665 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C0L89_16680 PF00884 Sulfatase C0L89_16680 PF08019 Phosphoethanolamine transferase EptA/EptB C0L89_16685 PF07963 Prokaryotic N-terminal methylation motif C0L89_16685 PF00114 Pilin (bacterial filament) C0L89_16690 PF00482 Type II secretion system (T2SS), protein F C0L89_16695 PF01478 Type IV leader peptidase family C0L89_16695 PF06750 Bacterial Peptidase A24 N-terminal domain C0L89_16700 PF01121 Dephospho-CoA kinase C0L89_16705 PF00512 His Kinase A (phospho-acceptor) domain C0L89_16705 PF00672 HAMP domain C0L89_16705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_16710 PF00486 Transcriptional regulatory protein, C terminal C0L89_16710 PF00072 Response regulator receiver domain C0L89_16720 PF08443 RimK-like ATP-grasp domain C0L89_16720 PF18030 RimK PreATP-grasp domain C0L89_16725 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C0L89_16725 PF00128 Alpha amylase, catalytic domain C0L89_16730 PF01609 Transposase DDE domain C0L89_16730 PF05598 Transposase domain (DUF772) C0L89_16745 PF01609 Transposase DDE domain C0L89_16745 PF05598 Transposase domain (DUF772) C0L89_16750 PF05598 Transposase domain (DUF772) C0L89_16775 PF05598 Transposase domain (DUF772) C0L89_16775 PF01609 Transposase DDE domain C0L89_16800 PF05690 Thiazole biosynthesis protein ThiG C0L89_16810 PF02390 Putative methyltransferase C0L89_16815 PF02080 TrkA-C domain C0L89_16815 PF03600 Citrate transporter C0L89_16840 PF01557 Fumarylacetoacetate (FAA) hydrolase family C0L89_16845 PF01741 Large-conductance mechanosensitive channel, MscL C0L89_16880 PF00588 SpoU rRNA Methylase family C0L89_16880 PF08032 RNA 2'-O ribose methyltransferase substrate binding C0L89_16895 PF01433 Peptidase family M1 domain C0L89_16895 PF11838 ERAP1-like C-terminal domain C0L89_16900 PF00873 AcrB/AcrD/AcrF family C0L89_16905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C0L89_16905 PF00529 HlyD membrane-fusion protein of T1SS C0L89_16910 PF00009 Elongation factor Tu GTP binding domain C0L89_16915 PF01507 Phosphoadenosine phosphosulfate reductase family C0L89_16920 PF00667 FAD binding domain C0L89_16920 PF00258 Flavodoxin C0L89_16920 PF00175 Oxidoreductase NAD-binding domain C0L89_16925 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C0L89_16925 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C0L89_16930 PF01507 Phosphoadenosine phosphosulfate reductase family C0L89_16950 PF00072 Response regulator receiver domain C0L89_16950 PF00672 HAMP domain C0L89_16950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_16950 PF01627 Hpt domain C0L89_16950 PF00512 His Kinase A (phospho-acceptor) domain C0L89_16975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L89_16975 PF03466 LysR substrate binding domain C0L89_16980 PF10414 Sirohaem synthase dimerisation region C0L89_16980 PF14824 Sirohaem biosynthesis protein central C0L89_16980 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C0L89_16985 PF00291 Pyridoxal-phosphate dependent enzyme C0L89_16995 PF01661 Macro domain C0L89_17000 PF00274 Fructose-bisphosphate aldolase class-I C0L89_17010 PF00224 Pyruvate kinase, barrel domain C0L89_17010 PF02887 Pyruvate kinase, alpha/beta domain C0L89_17020 PF00162 Phosphoglycerate kinase C0L89_17040 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C0L89_17040 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C0L89_17055 PF04273 Putative phosphatase (DUF442) C0L89_17055 PF00753 Metallo-beta-lactamase superfamily C0L89_17065 PF00528 Binding-protein-dependent transport system inner membrane component C0L89_17070 PF00005 ABC transporter C0L89_17070 PF03459 TOBE domain C0L89_17090 PF08521 Two-component sensor kinase N-terminal C0L89_17090 PF00512 His Kinase A (phospho-acceptor) domain C0L89_17090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_17095 PF00486 Transcriptional regulatory protein, C terminal C0L89_17095 PF00072 Response regulator receiver domain C0L89_17115 PF00501 AMP-binding enzyme C0L89_17145 PF03734 L,D-transpeptidase catalytic domain C0L89_17145 PF01476 LysM domain C0L89_17150 PF04225 Opacity-associated protein A LysM-like domain C0L89_17150 PF01551 Peptidase family M23 C0L89_17165 PF02779 Transketolase, pyrimidine binding domain C0L89_17165 PF00456 Transketolase, thiamine diphosphate binding domain C0L89_17165 PF02780 Transketolase, C-terminal domain C0L89_17170 PF00375 Sodium:dicarboxylate symporter family C0L89_17190 PF00092 von Willebrand factor type A domain C0L89_17190 PF07584 Aerotolerance regulator N-terminal C0L89_17210 PF07726 ATPase family associated with various cellular activities (AAA) C0L89_17210 PF17863 AAA lid domain C0L89_17220 PF03958 Bacterial type II/III secretion system short domain C0L89_17220 PF11741 AMIN domain C0L89_17220 PF07660 Secretin and TonB N terminus short domain C0L89_17220 PF00263 Bacterial type II and III secretion system protein C0L89_17245 PF17092 Penicillin-binding protein OB-like domain C0L89_17245 PF00912 Transglycosylase C0L89_17245 PF00905 Penicillin binding protein transpeptidase domain C0L89_17250 PF05598 Transposase domain (DUF772) C0L89_17265 PF00285 Citrate synthase, C-terminal domain C0L89_17270 PF01197 Ribosomal protein L31 C0L89_17275 PF01156 Inosine-uridine preferring nucleoside hydrolase C0L89_17280 PF00270 DEAD/DEAH box helicase C0L89_17280 PF17191 RecG wedge domain C0L89_17280 PF00271 Helicase conserved C-terminal domain C0L89_17285 PF01042 Endoribonuclease L-PSP C0L89_17290 PF13291 ACT domain C0L89_17290 PF04607 Region found in RelA / SpoT proteins C0L89_17290 PF02824 TGS domain C0L89_17295 PF01192 RNA polymerase Rpb6 C0L89_17305 PF00625 Guanylate kinase C0L89_17310 PF08340 Domain of unknown function (DUF1732) C0L89_17310 PF03755 YicC-like family, N-terminal region C0L89_17315 PF01138 3' exoribonuclease family, domain 1 C0L89_17315 PF03725 3' exoribonuclease family, domain 2 C0L89_17325 PF01725 Ham1 family C0L89_17330 PF06969 HemN C-terminal domain C0L89_17330 PF04055 Radical SAM superfamily C0L89_17345 PF00557 Metallopeptidase family M24 C0L89_17360 PF05195 Aminopeptidase P, N-terminal domain C0L89_17360 PF00557 Metallopeptidase family M24 C0L89_17365 PF03695 Uncharacterised protein family (UPF0149) C0L89_17375 PF05164 Cell division protein ZapA C0L89_17385 PF01812 5-formyltetrahydrofolate cyclo-ligase family C0L89_17395 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C0L89_17405 PF13369 Transglutaminase-like superfamily C0L89_17410 PF00301 Rubredoxin C0L89_17415 PF02581 Thiamine monophosphate synthase C0L89_17430 PF00202 Aminotransferase class-III C0L89_17440 PF00196 Bacterial regulatory proteins, luxR family C0L89_17440 PF17874 MalT-like TPR region C0L89_17445 PF00127 Copper binding proteins, plastocyanin/azurin family C0L89_17485 PF00202 Aminotransferase class-III C0L89_17510 PF01569 PAP2 superfamily C0L89_17525 PF01062 Bestrophin, RFP-TM, chloride channel C0L89_17535 PF01225 Mur ligase family, catalytic domain C0L89_17535 PF02875 Mur ligase family, glutamate ligase domain C0L89_17535 PF08245 Mur ligase middle domain C0L89_17545 PF00365 Phosphofructokinase C0L89_17550 PF01609 Transposase DDE domain C0L89_17550 PF05598 Transposase domain (DUF772) C0L89_17565 PF03030 Inorganic H+ pyrophosphatase C0L89_17575 PF00719 Inorganic pyrophosphatase C0L89_17590 PF07715 TonB-dependent Receptor Plug Domain C0L89_17590 PF00593 TonB dependent receptor C0L89_17595 PF12833 Helix-turn-helix domain C0L89_17600 PF00486 Transcriptional regulatory protein, C terminal C0L89_17600 PF18500 CadC C-terminal domain 1 C0L89_17605 PF13667 ThiC-associated domain C0L89_17605 PF01964 Radical SAM ThiC family C0L89_17615 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C0L89_17615 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C0L89_17620 PF00205 Thiamine pyrophosphate enzyme, central domain C0L89_17620 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C0L89_17620 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C0L89_17630 PF00291 Pyridoxal-phosphate dependent enzyme C0L89_17635 PF00682 HMGL-like C0L89_17635 PF08502 LeuA allosteric (dimerisation) domain C0L89_17640 PF00180 Isocitrate/isopropylmalate dehydrogenase C0L89_17645 PF08241 Methyltransferase domain C0L89_17650 PF00694 Aconitase C-terminal domain C0L89_17655 PF00330 Aconitase family (aconitate hydratase) C0L89_17660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L89_17680 PF02321 Outer membrane efflux protein C0L89_17685 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) C0L89_17690 PF03279 Bacterial lipid A biosynthesis acyltransferase C0L89_17710 PF00664 ABC transporter transmembrane region C0L89_17710 PF03412 Peptidase C39 family C0L89_17710 PF00005 ABC transporter C0L89_17720 PF13936 Helix-turn-helix domain C0L89_17720 PF00665 Integrase core domain C0L89_17725 PF00005 ABC transporter C0L89_17725 PF03412 Peptidase C39 family C0L89_17725 PF00664 ABC transporter transmembrane region C0L89_17760 PF03949 Malic enzyme, NAD binding domain C0L89_17760 PF01515 Phosphate acetyl/butaryl transferase C0L89_17760 PF00390 Malic enzyme, N-terminal domain C0L89_17765 PF00375 Sodium:dicarboxylate symporter family C0L89_17780 PF00512 His Kinase A (phospho-acceptor) domain C0L89_17780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_17785 PF07690 Major Facilitator Superfamily C0L89_17795 PF03466 LysR substrate binding domain C0L89_17795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L89_17815 PF00072 Response regulator receiver domain C0L89_17815 PF00196 Bacterial regulatory proteins, luxR family C0L89_17825 PF08521 Two-component sensor kinase N-terminal C0L89_17825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_17825 PF00512 His Kinase A (phospho-acceptor) domain C0L89_17830 PF00486 Transcriptional regulatory protein, C terminal C0L89_17830 PF00072 Response regulator receiver domain C0L89_17845 PF03600 Citrate transporter C0L89_17850 PF00106 short chain dehydrogenase C0L89_17860 PF00356 Bacterial regulatory proteins, lacI family C0L89_17875 PF00128 Alpha amylase, catalytic domain C0L89_17890 PF03193 RsgA GTPase C0L89_17895 PF00155 Aminotransferase class I and II C0L89_17915 PF01522 Polysaccharide deacetylase C0L89_17920 PF00462 Glutaredoxin C0L89_17940 PF01979 Amidohydrolase family C0L89_17990 PF01327 Polypeptide deformylase C0L89_17995 PF05598 Transposase domain (DUF772) C0L89_17995 PF01609 Transposase DDE domain C0L89_18000 PF03960 ArsC family C0L89_18025 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C0L89_18025 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C0L89_18070 PF00593 TonB dependent receptor C0L89_18070 PF07715 TonB-dependent Receptor Plug Domain C0L89_18085 PF07702 UTRA domain C0L89_18085 PF00392 Bacterial regulatory proteins, gntR family C0L89_18100 PF00263 Bacterial type II and III secretion system protein C0L89_18100 PF03958 Bacterial type II/III secretion system short domain C0L89_18110 PF10741 Type II secretion system (T2SS), protein M subtype b C0L89_18115 PF05137 Fimbrial assembly protein (PilN) C0L89_18120 PF03934 Type II secretion system (T2SS), protein K C0L89_18130 PF07963 Prokaryotic N-terminal methylation motif C0L89_18135 PF12019 Type II transport protein GspH C0L89_18140 PF08334 Type II secretion system (T2SS), protein G C0L89_18145 PF00482 Type II secretion system (T2SS), protein F C0L89_18155 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C0L89_18155 PF00437 Type II/IV secretion system protein C0L89_18160 PF04151 Bacterial pre-peptidase C-terminal domain C0L89_18160 PF00082 Subtilase family C0L89_18165 PF03895 YadA-like membrane anchor domain C0L89_18165 PF13018 Extended Signal Peptide of Type V secretion system C0L89_18165 PF05658 Head domain of trimeric autotransporter adhesin C0L89_18165 PF05662 Coiled stalk of trimeric autotransporter adhesin C0L89_18175 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C0L89_18175 PF02769 AIR synthase related protein, C-terminal domain C0L89_18175 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal C0L89_18185 PF13098 Thioredoxin-like domain C0L89_18185 PF10411 Disulfide bond isomerase protein N-terminus C0L89_18190 PF02899 Phage integrase, N-terminal SAM-like domain C0L89_18190 PF00589 Phage integrase family C0L89_18205 PF03739 Lipopolysaccharide export system permease LptF/LptG C0L89_18215 PF02789 Cytosol aminopeptidase family, N-terminal domain C0L89_18215 PF00883 Cytosol aminopeptidase family, catalytic domain C0L89_18240 PF08264 Anticodon-binding domain of tRNA C0L89_18240 PF00133 tRNA synthetases class I (I, L, M and V) C0L89_18240 PF10458 Valyl tRNA synthetase tRNA binding arm C0L89_18250 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain C0L89_18250 PF01464 Transglycosylase SLT domain C0L89_18280 PF13936 Helix-turn-helix domain C0L89_18280 PF00665 Integrase core domain C0L89_18290 PF00665 Integrase core domain C0L89_18290 PF13936 Helix-turn-helix domain C0L89_18315 PF01066 CDP-alcohol phosphatidyltransferase C0L89_18325 PF04073 Aminoacyl-tRNA editing domain C0L89_18325 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C0L89_18325 PF03129 Anticodon binding domain C0L89_18330 PF00816 H-NS histone family C0L89_18340 PF02405 Permease MlaE C0L89_18345 PF00005 ABC transporter C0L89_18350 PF03886 ABC-type transport auxiliary lipoprotein component C0L89_18350 PF02470 MlaD protein C0L89_18380 PF05045 Rhamnan synthesis protein F C0L89_18380 PF14307 Glycosyltransferase WbsX C0L89_18385 PF01144 Coenzyme A transferase C0L89_18390 PF01144 Coenzyme A transferase C0L89_18395 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C0L89_18395 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C0L89_18395 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C0L89_18395 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C0L89_18400 PF00483 Nucleotidyl transferase C0L89_18400 PF01050 Mannose-6-phosphate isomerase C0L89_18405 PF04321 RmlD substrate binding domain C0L89_18410 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase C0L89_18415 PF00483 Nucleotidyl transferase C0L89_18420 PF16363 GDP-mannose 4,6 dehydratase C0L89_18430 PF01012 Electron transfer flavoprotein domain C0L89_18435 PF01012 Electron transfer flavoprotein domain C0L89_18435 PF00766 Electron transfer flavoprotein FAD-binding domain C0L89_18445 PF00005 ABC transporter C0L89_18450 PF05598 Transposase domain (DUF772) C0L89_18480 PF01370 NAD dependent epimerase/dehydratase family C0L89_18490 PF01053 Cys/Met metabolism PLP-dependent enzyme C0L89_18495 PF00291 Pyridoxal-phosphate dependent enzyme C0L89_18495 PF00571 CBS domain C0L89_18515 PF00437 Type II/IV secretion system protein C0L89_18520 PF14497 Glutathione S-transferase, C-terminal domain C0L89_18520 PF02798 Glutathione S-transferase, N-terminal domain C0L89_18535 PF00270 DEAD/DEAH box helicase C0L89_18535 PF00271 Helicase conserved C-terminal domain C0L89_18545 PF01242 6-pyruvoyl tetrahydropterin synthase C0L89_18560 PF13185 GAF domain C0L89_18570 PF01609 Transposase DDE domain C0L89_18570 PF05598 Transposase domain (DUF772) C0L89_18575 PF13419 Haloacid dehalogenase-like hydrolase C0L89_18580 PF00817 impB/mucB/samB family C0L89_18580 PF11799 impB/mucB/samB family C-terminal domain C0L89_18590 PF07977 FabA-like domain C0L89_18595 PF02801 Beta-ketoacyl synthase, C-terminal domain C0L89_18595 PF00109 Beta-ketoacyl synthase, N-terminal domain C0L89_18605 PF01432 Peptidase family M3 C0L89_18620 PF00394 Multicopper oxidase C0L89_18620 PF07732 Multicopper oxidase C0L89_18620 PF07731 Multicopper oxidase C0L89_18625 PF05275 Copper resistance protein B precursor (CopB) C0L89_18630 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C0L89_18655 PF01380 SIS domain C0L89_18695 PF14602 Hexapeptide repeat of succinyl-transferase C0L89_18695 PF12804 MobA-like NTP transferase domain C0L89_18695 PF00132 Bacterial transferase hexapeptide (six repeats) C0L89_18710 PF01817 Chorismate mutase type II C0L89_18715 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C0L89_18720 PF02874 ATP synthase alpha/beta family, beta-barrel domain C0L89_18720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C0L89_18725 PF00231 ATP synthase C0L89_18730 PF02874 ATP synthase alpha/beta family, beta-barrel domain C0L89_18730 PF00306 ATP synthase alpha/beta chain, C terminal domain C0L89_18730 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C0L89_18735 PF00213 ATP synthase delta (OSCP) subunit C0L89_18740 PF00430 ATP synthase B/B' CF(0) C0L89_18745 PF00137 ATP synthase subunit C C0L89_18750 PF00119 ATP synthase A chain C0L89_18770 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C0L89_18770 PF07992 Pyridine nucleotide-disulphide oxidoreductase C0L89_18780 PF02817 e3 binding domain C0L89_18780 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C0L89_18780 PF00364 Biotin-requiring enzyme C0L89_18810 PF03180 NLPA lipoprotein C0L89_18815 PF00528 Binding-protein-dependent transport system inner membrane component C0L89_18820 PF09383 NIL domain C0L89_18820 PF00005 ABC transporter C0L89_18825 PF00892 EamA-like transporter family C0L89_18830 PF04461 Protein of unknown function (DUF520) C0L89_18865 PF13419 Haloacid dehalogenase-like hydrolase C0L89_18870 PF00849 RNA pseudouridylate synthase C0L89_18870 PF01479 S4 domain C0L89_18875 PF05175 Methyltransferase small domain C0L89_18875 PF08468 Methyltransferase small domain N-terminal C0L89_18890 PF07995 Glucose / Sorbosone dehydrogenase C0L89_18905 PF00512 His Kinase A (phospho-acceptor) domain C0L89_18905 PF00989 PAS fold C0L89_18905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_18925 PF01168 Alanine racemase, N-terminal domain C0L89_18925 PF00842 Alanine racemase, C-terminal domain C0L89_18930 PF01266 FAD dependent oxidoreductase C0L89_18935 PF01037 Lrp/AsnC ligand binding domain C0L89_18945 PF01641 SelR domain C0L89_18955 PF01618 MotA/TolQ/ExbB proton channel family C0L89_18960 PF13677 Membrane MotB of proton-channel complex MotA/MotB C0L89_18960 PF00691 OmpA family C0L89_18980 PF00486 Transcriptional regulatory protein, C terminal C0L89_18980 PF00072 Response regulator receiver domain C0L89_18985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_18985 PF00512 His Kinase A (phospho-acceptor) domain C0L89_18985 PF08448 PAS fold C0L89_18985 PF00072 Response regulator receiver domain C0L89_18985 PF13188 PAS domain C0L89_18995 PF00082 Subtilase family C0L89_18995 PF04151 Bacterial pre-peptidase C-terminal domain C0L89_19010 PF01061 ABC-2 type transporter C0L89_19015 PF00005 ABC transporter C0L89_19020 PF00999 Sodium/hydrogen exchanger family C0L89_19030 PF02469 Fasciclin domain C0L89_19040 PF03167 Uracil DNA glycosylase superfamily C0L89_19050 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C0L89_19060 PF03358 NADPH-dependent FMN reductase C0L89_19065 PF00248 Aldo/keto reductase family C0L89_19080 PF05649 Peptidase family M13 C0L89_19080 PF01431 Peptidase family M13 C0L89_19100 PF13520 Amino acid permease C0L89_19110 PF00072 Response regulator receiver domain C0L89_19110 PF04397 LytTr DNA-binding domain C0L89_19125 PF05974 Domain of unknown function (DUF892) C0L89_19130 PF05067 Manganese containing catalase C0L89_19145 PF03705 CheR methyltransferase, all-alpha domain C0L89_19145 PF01739 CheR methyltransferase, SAM binding domain C0L89_19145 PF08448 PAS fold C0L89_19145 PF01339 CheB methylesterase C0L89_19155 PF01609 Transposase DDE domain C0L89_19155 PF05598 Transposase domain (DUF772) C0L89_19170 PF00072 Response regulator receiver domain C0L89_19170 PF00158 Sigma-54 interaction domain C0L89_19170 PF02954 Bacterial regulatory protein, Fis family C0L89_19185 PF01654 Cytochrome bd terminal oxidase subunit I C0L89_19190 PF02322 Cytochrome bd terminal oxidase subunit II C0L89_19225 PF08240 Alcohol dehydrogenase GroES-like domain C0L89_19225 PF00107 Zinc-binding dehydrogenase C0L89_19225 PF13823 Alcohol dehydrogenase GroES-associated C0L89_19265 PF07715 TonB-dependent Receptor Plug Domain C0L89_19265 PF00593 TonB dependent receptor C0L89_19280 PF00005 ABC transporter C0L89_19300 PF03971 Monomeric isocitrate dehydrogenase C0L89_19320 PF14489 QueF-like protein C0L89_19320 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term C0L89_19330 PF01546 Peptidase family M20/M25/M40 C0L89_19330 PF07687 Peptidase dimerisation domain C0L89_19335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C0L89_19340 PF00873 AcrB/AcrD/AcrF family C0L89_19345 PF00873 AcrB/AcrD/AcrF family C0L89_19365 PF07063 Domain of unknown function (DUF1338) C0L89_19415 PF01510 N-acetylmuramoyl-L-alanine amidase C0L89_19425 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C0L89_19425 PF13378 Enolase C-terminal domain-like C0L89_19450 PF13520 Amino acid permease C0L89_19470 PF05360 yiaA/B two helix domain C0L89_19475 PF07995 Glucose / Sorbosone dehydrogenase C0L89_19490 PF00933 Glycosyl hydrolase family 3 N terminal domain C0L89_19490 PF01915 Glycosyl hydrolase family 3 C-terminal domain C0L89_19490 PF14310 Fibronectin type III-like domain C0L89_19495 PF02152 Dihydroneopterin aldolase C0L89_19500 PF00814 Glycoprotease family C0L89_19505 PF01165 Ribosomal protein S21 C0L89_19515 PF09424 Yqey-like protein C0L89_19535 PF03631 Virulence factor BrkB C0L89_19540 PF10410 DnaB-helicase binding domain of primase C0L89_19540 PF08278 DNA primase DnaG DnaB-binding C0L89_19540 PF08275 DNA primase catalytic core, N-terminal domain C0L89_19540 PF01807 CHC2 zinc finger C0L89_19560 PF13593 SBF-like CPA transporter family (DUF4137) C0L89_19580 PF01040 UbiA prenyltransferase family C0L89_19605 PF00510 Cytochrome c oxidase subunit III C0L89_19610 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 C0L89_19620 PF00115 Cytochrome C and Quinol oxidase polypeptide I C0L89_19625 PF02790 Cytochrome C oxidase subunit II, transmembrane domain C0L89_19625 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C0L89_19635 PF00171 Aldehyde dehydrogenase family C0L89_19635 PF18327 Proline utilization A proline dehydrogenase N-terminal domain C0L89_19635 PF14850 DNA-binding domain of Proline dehydrogenase C0L89_19635 PF01619 Proline dehydrogenase C0L89_19685 PF00579 tRNA synthetases class I (W and Y) C0L89_19690 PF04225 Opacity-associated protein A LysM-like domain C0L89_19690 PF01551 Peptidase family M23 C0L89_19695 PF03702 Anhydro-N-acetylmuramic acid kinase C0L89_19705 PF07690 Major Facilitator Superfamily C0L89_19710 PF03372 Endonuclease/Exonuclease/phosphatase family C0L89_19745 PF16671 Actin cross-linking domain C0L89_19745 PF04717 Type VI secretion system, phage-baseplate injector C0L89_19840 PF00574 Clp protease C0L89_19845 PF04860 Phage portal protein C0L89_19850 PF03354 Phage Terminase C0L89_19910 PF00772 DnaB-like helicase N terminal domain C0L89_19910 PF03796 DnaB-like helicase C terminal domain C0L89_19955 PF00589 Phage integrase family C0L89_19955 PF14659 Phage integrase, N-terminal SAM-like domain C0L89_19955 PF13356 Arm DNA-binding domain C0L89_19960 PF00156 Phosphoribosyl transferase domain C0L89_19970 PF13614 AAA domain C0L89_19975 PF02195 ParB-like nuclease domain C0L89_19975 PF17762 HTH domain found in ParB protein C0L89_19985 PF01370 NAD dependent epimerase/dehydratase family C0L89_19990 PF00535 Glycosyl transferase family 2 C0L89_20005 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C0L89_20005 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C0L89_20005 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C0L89_20005 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C0L89_20010 PF00692 dUTPase C0L89_20015 PF02441 Flavoprotein C0L89_20015 PF04127 DNA / pantothenate metabolism flavoprotein C0L89_20020 PF04002 RadC-like JAB domain C0L89_20025 PF00750 tRNA synthetases class I (R) C0L89_20025 PF05746 DALR anticodon binding domain C0L89_20025 PF03485 Arginyl tRNA synthetase N terminal domain C0L89_20040 PF00106 short chain dehydrogenase C0L89_20050 PF03377 TAL effector repeat C0L89_20080 PF17810 Arginine decarboxylase helical bundle domain C0L89_20080 PF17944 Arginine decarboxylase C-terminal helical extension C0L89_20080 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C0L89_20085 PF17284 Spermidine synthase tetramerisation domain C0L89_20120 PF00543 Nitrogen regulatory protein P-II C0L89_20125 PF04380 Membrane fusogenic activity C0L89_20130 PF13335 Magnesium chelatase, subunit ChlI C-terminal C0L89_20130 PF01078 Magnesium chelatase, subunit ChlI C0L89_20155 PF00563 EAL domain C0L89_20155 PF12792 CSS motif domain associated with EAL C0L89_20160 PF00487 Fatty acid desaturase C0L89_20165 PF00970 Oxidoreductase FAD-binding domain C0L89_20165 PF00175 Oxidoreductase NAD-binding domain C0L89_20165 PF00111 2Fe-2S iron-sulfur cluster binding domain C0L89_20170 PF00440 Bacterial regulatory proteins, tetR family C0L89_20175 PF05598 Transposase domain (DUF772) C0L89_20175 PF01609 Transposase DDE domain C0L89_20235 PF01370 NAD dependent epimerase/dehydratase family C0L89_20235 PF08338 Domain of unknown function (DUF1731) C0L89_20245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_20245 PF08521 Two-component sensor kinase N-terminal C0L89_20245 PF00512 His Kinase A (phospho-acceptor) domain C0L89_20260 PF00595 PDZ domain C0L89_20285 PF01594 AI-2E family transporter C0L89_20295 PF00883 Cytosol aminopeptidase family, catalytic domain C0L89_20295 PF02789 Cytosol aminopeptidase family, N-terminal domain C0L89_20305 PF08281 Sigma-70, region 4 C0L89_20305 PF04542 Sigma-70 region 2 C0L89_20310 PF00199 Catalase C0L89_20330 PF00892 EamA-like transporter family C0L89_20335 PF00892 EamA-like transporter family C0L89_20360 PF00753 Metallo-beta-lactamase superfamily C0L89_20365 PF00579 tRNA synthetases class I (W and Y) C0L89_20370 PF05532 CsbD-like C0L89_20385 PF00491 Arginase family C0L89_20405 PF02223 Thymidylate kinase C0L89_20420 PF03309 Type III pantothenate kinase C0L89_20425 PF03099 Biotin/lipoate A/B protein ligase family C0L89_20425 PF08279 HTH domain C0L89_20425 PF02237 Biotin protein ligase C terminal domain C0L89_20435 PF06167 Glucose-regulated metallo-peptidase M90 C0L89_20450 PF00672 HAMP domain C0L89_20450 PF00512 His Kinase A (phospho-acceptor) domain C0L89_20450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_20455 PF00486 Transcriptional regulatory protein, C terminal C0L89_20455 PF00072 Response regulator receiver domain C0L89_20465 PF01207 Dihydrouridine synthase (Dus) C0L89_20480 PF03377 TAL effector repeat C0L89_20515 PF06628 Catalase-related immune-responsive C0L89_20515 PF00199 Catalase C0L89_20520 PF01609 Transposase DDE domain C0L89_20520 PF05598 Transposase domain (DUF772) C0L89_20525 PF13533 Biotin-lipoyl like C0L89_20540 PF06733 DEAD_2 C0L89_20540 PF13307 Helicase C-terminal domain C0L89_20555 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C0L89_20555 PF01488 Shikimate / quinate 5-dehydrogenase C0L89_20555 PF08501 Shikimate dehydrogenase substrate binding domain C0L89_20575 PF00175 Oxidoreductase NAD-binding domain C0L89_20575 PF00258 Flavodoxin C0L89_20575 PF00667 FAD binding domain C0L89_20585 PF03466 LysR substrate binding domain C0L89_20585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L89_20600 PF00490 Delta-aminolevulinic acid dehydratase C0L89_20625 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region C0L89_20625 PF00326 Prolyl oligopeptidase family C0L89_20645 PF13936 Helix-turn-helix domain C0L89_20645 PF00665 Integrase core domain C0L89_20650 PF05598 Transposase domain (DUF772) C0L89_20675 PF00005 ABC transporter C0L89_20685 PF01381 Helix-turn-helix C0L89_20700 PF02583 Metal-sensitive transcriptional repressor C0L89_20705 PF01545 Cation efflux family C0L89_20710 PF01383 CpcD/allophycocyanin linker domain C0L89_20710 PF00175 Oxidoreductase NAD-binding domain C0L89_20715 PF00005 ABC transporter C0L89_20720 PF01061 ABC-2 type transporter C0L89_20730 PF08546 Ketopantoate reductase PanE/ApbA C terminal C0L89_20730 PF02558 Ketopantoate reductase PanE/ApbA C0L89_20755 PF05598 Transposase domain (DUF772) C0L89_20785 PF13406 Transglycosylase SLT domain C0L89_20805 PF00268 Ribonucleotide reductase, small chain C0L89_20815 PF03477 ATP cone domain C0L89_20815 PF02867 Ribonucleotide reductase, barrel domain C0L89_20815 PF00317 Ribonucleotide reductase, all-alpha domain C0L89_20830 PF13380 CoA binding domain C0L89_20830 PF00583 Acetyltransferase (GNAT) family C0L89_20830 PF13607 Succinyl-CoA ligase like flavodoxin domain C0L89_20840 PF03448 MgtE intracellular N domain C0L89_20840 PF00571 CBS domain C0L89_20840 PF01769 Divalent cation transporter C0L89_20850 PF00999 Sodium/hydrogen exchanger family C0L89_20850 PF02254 TrkA-N domain C0L89_20865 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain C0L89_20865 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain C0L89_20870 PF00723 Glycosyl hydrolases family 15 C0L89_20885 PF05166 YcgL domain C0L89_20890 PF00109 Beta-ketoacyl synthase, N-terminal domain C0L89_20890 PF02801 Beta-ketoacyl synthase, C-terminal domain C0L89_20900 PF00535 Glycosyl transferase family 2 C0L89_20910 PF05598 Transposase domain (DUF772) C0L89_20945 PF07977 FabA-like domain C0L89_20950 PF01553 Acyltransferase C0L89_20960 PF00550 Phosphopantetheine attachment site C0L89_20965 PF04820 Tryptophan halogenase C0L89_21000 PF01218 Coproporphyrinogen III oxidase C0L89_21015 PF01367 5'-3' exonuclease, C-terminal SAM fold C0L89_21015 PF00476 DNA polymerase family A C0L89_21015 PF01612 3'-5' exonuclease C0L89_21015 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C0L89_21065 PF12464 Maltose acetyltransferase C0L89_21065 PF14602 Hexapeptide repeat of succinyl-transferase C0L89_21075 PF00580 UvrD/REP helicase N-terminal domain C0L89_21075 PF13361 UvrD-like helicase C-terminal domain C0L89_21095 PF13396 Phospholipase_D-nuclease N-terminal C0L89_21095 PF13091 PLD-like domain C0L89_21100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C0L89_21105 PF05598 Transposase domain (DUF772) C0L89_21110 PF03737 Aldolase/RraA C0L89_21125 PF04909 Amidohydrolase C0L89_21130 PF00471 Ribosomal protein L33 C0L89_21135 PF00830 Ribosomal L28 family C0L89_21155 PF02527 rRNA small subunit methyltransferase G C0L89_21160 PF16655 PhoD-like phosphatase, N-terminal domain C0L89_21160 PF09423 PhoD-like phosphatase C0L89_21170 PF01648 4'-phosphopantetheinyl transferase superfamily C0L89_21175 PF04226 Transglycosylase associated protein C0L89_21185 PF03372 Endonuclease/Exonuclease/phosphatase family C0L89_21200 PF00474 Sodium:solute symporter family C0L89_21205 PF04341 Protein of unknown function, DUF485 C0L89_21215 PF13193 AMP-binding enzyme C-terminal domain C0L89_21215 PF16177 Acetyl-coenzyme A synthetase N-terminus C0L89_21215 PF00501 AMP-binding enzyme C0L89_21220 PF00072 Response regulator receiver domain C0L89_21220 PF00196 Bacterial regulatory proteins, luxR family C0L89_21250 PF00248 Aldo/keto reductase family C0L89_21265 PF01557 Fumarylacetoacetate (FAA) hydrolase family C0L89_21275 PF13378 Enolase C-terminal domain-like C0L89_21275 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C0L89_21285 PF05598 Transposase domain (DUF772) C0L89_21285 PF01609 Transposase DDE domain C0L89_21290 PF05336 L-rhamnose mutarotase C0L89_21295 PF07690 Major Facilitator Superfamily C0L89_21300 PF09339 IclR helix-turn-helix domain C0L89_21300 PF01614 Bacterial transcriptional regulator C0L89_21305 PF02659 Putative manganese efflux pump C0L89_21310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C0L89_21310 PF00512 His Kinase A (phospho-acceptor) domain C0L89_21320 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain C0L89_21320 PF06165 Glycosyltransferase family 36 C0L89_21335 PF01011 PQQ enzyme repeat C0L89_21335 PF13570 PQQ-like domain C0L89_21335 PF13360 PQQ-like domain C0L89_21375 PF01609 Transposase DDE domain C0L89_21375 PF05598 Transposase domain (DUF772) C0L89_21385 PF01609 Transposase DDE domain C0L89_21385 PF05598 Transposase domain (DUF772) C0L89_21390 PF04357 TamB, inner membrane protein subunit of TAM complex C0L89_21395 PF01103 Surface antigen C0L89_21395 PF17243 POTRA domain TamA domain 1 C0L89_21400 PF07715 TonB-dependent Receptor Plug Domain C0L89_21400 PF00593 TonB dependent receptor C0L89_21405 PF13181 Tetratricopeptide repeat C0L89_21410 PF02092 Glycyl-tRNA synthetase beta subunit C0L89_21410 PF05746 DALR anticodon binding domain C0L89_21415 PF02091 Glycyl-tRNA synthetase alpha subunit C0L89_21420 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C0L89_21420 PF00437 Type II/IV secretion system protein C0L89_21430 PF00117 Glutamine amidotransferase class-I C0L89_21430 PF00958 GMP synthase C terminal domain C0L89_21440 PF00902 Sec-independent protein translocase protein (TatC) C0L89_21445 PF02416 mttA/Hcf106 family C0L89_21450 PF02416 mttA/Hcf106 family C0L89_21460 PF00762 Ferrochelatase C0L89_21465 PF12697 Alpha/beta hydrolase family C0L89_21490 PF04381 Putative exonuclease, RdgC C0L89_21495 PF01171 PP-loop family C0L89_21515 PF00356 Bacterial regulatory proteins, lacI family C0L89_21520 PF07488 Glycosyl hydrolase family 67 middle domain C0L89_21520 PF03648 Glycosyl hydrolase family 67 N-terminus C0L89_21520 PF07477 Glycosyl hydrolase family 67 C-terminus C0L89_21530 PF13378 Enolase C-terminal domain-like C0L89_21530 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C0L89_21535 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain C0L89_21535 PF04616 Glycosyl hydrolases family 43 C0L89_21550 PF08125 Mannitol dehydrogenase C-terminal domain C0L89_21550 PF01232 Mannitol dehydrogenase Rossmann domain C0L89_21560 PF05598 Transposase domain (DUF772) C0L89_21585 PF00665 Integrase core domain C0L89_21585 PF13936 Helix-turn-helix domain C0L89_21590 PF05598 Transposase domain (DUF772) C0L89_21610 PF02614 Glucuronate isomerase C0L89_21615 PF00553 Cellulose binding domain C0L89_21615 PF03422 Carbohydrate binding module (family 6) C0L89_21615 PF00331 Glycosyl hydrolase family 10 C0L89_21645 PF04616 Glycosyl hydrolases family 43 C0L89_21655 PF01609 Transposase DDE domain C0L89_21655 PF05598 Transposase domain (DUF772) C0L89_21685 PF02801 Beta-ketoacyl synthase, C-terminal domain C0L89_21685 PF08659 KR domain C0L89_21685 PF14765 Polyketide synthase dehydratase C0L89_21685 PF08240 Alcohol dehydrogenase GroES-like domain C0L89_21685 PF00698 Acyl transferase domain C0L89_21685 PF00107 Zinc-binding dehydrogenase C0L89_21685 PF16197 Ketoacyl-synthetase C-terminal extension C0L89_21685 PF00109 Beta-ketoacyl synthase, N-terminal domain C0L89_21685 PF00550 Phosphopantetheine attachment site C0L89_21690 PF01553 Acyltransferase C0L89_21705 PF00356 Bacterial regulatory proteins, lacI family C0L89_21720 PF05598 Transposase domain (DUF772) C0L89_21730 PF04820 Tryptophan halogenase C0L89_21735 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C0L89_21740 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) C0L89_21745 PF04337 Protein of unknown function, DUF480 C0L89_21760 PF13361 UvrD-like helicase C-terminal domain C0L89_21760 PF00580 UvrD/REP helicase N-terminal domain C0L89_21765 PF00265 Thymidine kinase C0L89_21775 PF04349 Periplasmic glucan biosynthesis protein, MdoG C0L89_21785 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C0L89_21785 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C0L89_21785 PF06827 Zinc finger found in FPG and IleRS C0L89_21790 PF05598 Transposase domain (DUF772) C0L89_21825 PF08446 PAS fold C0L89_21825 PF13426 PAS domain C0L89_21825 PF00360 Phytochrome region C0L89_21825 PF01590 GAF domain C0L89_21830 PF01126 Heme oxygenase C0L89_21835 PF07690 Major Facilitator Superfamily C0L89_21840 PF01263 Aldose 1-epimerase C0L89_21850 PF02810 SEC-C motif C0L89_21855 PF01925 Sulfite exporter TauE/SafE C0L89_21860 PF05598 Transposase domain (DUF772) C0L89_21890 PF02463 RecF/RecN/SMC N terminal domain C0L89_21895 PF01227 GTP cyclohydrolase I C0L89_21925 PF00665 Integrase core domain C0L89_21925 PF13936 Helix-turn-helix domain C0L89_21935 PF00083 Sugar (and other) transporter C0L89_21940 PF05598 Transposase domain (DUF772) C0L89_21950 PF13091 PLD-like domain C0L89_21950 PF13396 Phospholipase_D-nuclease N-terminal C0L89_21995 PF00085 Thioredoxin C0L89_22010 PF00293 NUDIX domain C0L89_22010 PF13344 Haloacid dehalogenase-like hydrolase C0L89_22030 PF05598 Transposase domain (DUF772) C0L89_22055 PF05532 CsbD-like C0L89_22090 PF00294 pfkB family carbohydrate kinase C0L89_22100 PF12241 Trans-2-enoyl-CoA reductase catalytic region C0L89_22100 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase C0L89_22100 PF07055 Enoyl reductase FAD binding domain C0L89_22120 PF01070 FMN-dependent dehydrogenase C0L89_22135 PF05598 Transposase domain (DUF772) C0L89_22145 PF07715 TonB-dependent Receptor Plug Domain C0L89_22145 PF00593 TonB dependent receptor C0L89_22150 PF00155 Aminotransferase class I and II C0L89_22155 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain C0L89_22175 PF05598 Transposase domain (DUF772) C0L89_22180 PF05598 Transposase domain (DUF772) C0L89_22190 PF01609 Transposase DDE domain C0L89_22190 PF05598 Transposase domain (DUF772) C0L89_22210 PF00005 ABC transporter C0L89_22210 PF03412 Peptidase C39 family C0L89_22210 PF00664 ABC transporter transmembrane region C0L89_22215 PF05598 Transposase domain (DUF772) C0L89_22220 PF05598 Transposase domain (DUF772) C0L89_22245 PF00849 RNA pseudouridylate synthase C0L89_22260 PF01751 Toprim domain C0L89_22260 PF01396 Topoisomerase DNA binding C4 zinc finger C0L89_22260 PF01131 DNA topoisomerase C0L89_22295 PF01609 Transposase DDE domain C0L89_22295 PF05598 Transposase domain (DUF772) C0L89_22315 PF00665 Integrase core domain C0L89_22315 PF13936 Helix-turn-helix domain C0L89_22375 PF13538 UvrD-like helicase C-terminal domain C0L89_22380 PF12705 PD-(D/E)XK nuclease superfamily C0L89_22380 PF00580 UvrD/REP helicase N-terminal domain C0L89_22380 PF13361 UvrD-like helicase C-terminal domain C0L89_22385 PF17946 RecC C-terminal domain C0L89_22390 PF00005 ABC transporter C0L89_22400 PF01609 Transposase DDE domain C0L89_22400 PF05598 Transposase domain (DUF772) C0L89_22405 PF05598 Transposase domain (DUF772) C0L89_22405 PF01609 Transposase DDE domain C0L89_22415 PF00005 ABC transporter C0L89_22435 PF00005 ABC transporter C0L89_22440 PF02405 Permease MlaE C0L89_22445 PF02470 MlaD protein C0L89_22450 PF05494 MlaC protein C0L89_22460 PF04333 MlaA lipoprotein C0L89_22470 PF05598 Transposase domain (DUF772) C0L89_22475 PF00255 Glutathione peroxidase C0L89_22485 PF02646 RmuC family C0L89_22490 PF05598 Transposase domain (DUF772) C0L89_22490 PF01609 Transposase DDE domain C0L89_22510 PF13556 PucR C-terminal helix-turn-helix domain C0L89_22510 PF07905 Purine catabolism regulatory protein-like family C0L89_22515 PF02595 Glycerate kinase family C0L89_22520 PF07690 Major Facilitator Superfamily C0L89_22535 PF10672 S-adenosylmethionine-dependent methyltransferase C0L89_22535 PF17785 PUA-like domain C0L89_22545 PF03741 Integral membrane protein TerC family C0L89_22555 PF01694 Rhomboid family C0L89_22560 PF03009 Glycerophosphoryl diester phosphodiesterase family C0L89_22570 PF01569 PAP2 superfamily C0L89_22575 PF12631 MnmE helical domain C0L89_22575 PF10396 GTP-binding protein TrmE N-terminus C0L89_22575 PF01926 50S ribosome-binding GTPase C0L89_22580 PF01522 Polysaccharide deacetylase C0L89_22585 PF14849 YidC periplasmic domain C0L89_22585 PF02096 60Kd inner membrane protein C0L89_22590 PF00825 Ribonuclease P C0L89_22595 PF00468 Ribosomal protein L34