C0L89_00010 SM00382 ATPases associated with a variety of cellular activities C0L89_00010 SM00760 Bacterial dnaA protein helix-turn-helix domain C0L89_00015 SM00480 DNA polymerase III beta subunit C0L89_00025 SM00387 Histidine kinase-like ATPases C0L89_00025 SM00433 TopoisomeraseII C0L89_00040 SM00028 Tetratricopeptide repeats C0L89_00075 SM00155 Phospholipase D. Active site motifs. C0L89_00100 SM00729 Elongator protein 3, MiaB family, Radical SAM C0L89_00135 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C0L89_00135 SM00245 tail specific protease C0L89_00195 SM00829 Enoylreductase C0L89_00300 SM00487 DEAD-like helicases superfamily C0L89_00300 SM00490 helicase superfamily c-terminal domain C0L89_00340 SM00382 ATPases associated with a variety of cellular activities C0L89_00340 SM00448 cheY-homologous receiver domain C0L89_00345 SM00387 Histidine kinase-like ATPases C0L89_00345 SM00388 His Kinase A (phosphoacceptor) domain C0L89_00355 SM00938 Nitrogen regulatory protein P-II C0L89_00360 SM01230 C0L89_00360 C0L89_00390 SM00028 Tetratricopeptide repeats C0L89_00405 SM00563 Phosphate acyltransferases C0L89_00415 SM00155 Phospholipase D. Active site motifs. C0L89_00420 SM00867 YceI-like domain C0L89_00425 SM00855 Phosphoglycerate mutase family C0L89_00450 SM00530 Helix-turn-helix XRE-family like proteins C0L89_00480 SM00382 ATPases associated with a variety of cellular activities C0L89_00495 SM00382 ATPases associated with a variety of cellular activities C0L89_00520 SM00344 helix_turn_helix ASNC type C0L89_00555 SM00354 helix_turn _helix lactose operon repressor C0L89_00590 SM00642 Alpha-amylase domain C0L89_00595 SM00642 Alpha-amylase domain C0L89_00600 SM00642 Alpha-amylase domain C0L89_00660 SM00450 Rhodanese Homology Domain C0L89_00685 SM00387 Histidine kinase-like ATPases C0L89_00685 SM00388 His Kinase A (phosphoacceptor) domain C0L89_00690 SM00382 ATPases associated with a variety of cellular activities C0L89_00690 SM00448 cheY-homologous receiver domain C0L89_00825 SM00563 Phosphate acyltransferases C0L89_00885 SM00878 Biotin carboxylase C-terminal domain C0L89_00945 SM00833 Cobalamin synthesis protein cobW C-terminal domain C0L89_00970 SM00347 helix_turn_helix multiple antibiotic resistance protein C0L89_01040 SM00829 Enoylreductase C0L89_01070 SM00487 DEAD-like helicases superfamily C0L89_01070 SM00490 helicase superfamily c-terminal domain C0L89_01070 SM00847 Helicase associated domain (HA2) Add an annotation C0L89_01265 SM00448 cheY-homologous receiver domain C0L89_01265 SM00862 Transcriptional regulatory protein, C terminal C0L89_01415 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C0L89_01420 SM00347 helix_turn_helix multiple antibiotic resistance protein C0L89_01440 SM00342 helix_turn_helix, arabinose operon control protein C0L89_01475 SM00882 Coenzyme A transferase C0L89_01505 SM00998 Adenylosuccinate lyase C-terminus C0L89_01530 SM00346 helix_turn_helix isocitrate lyase regulation C0L89_01535 SM00090 RIO-like kinase C0L89_01555 SM01228 C0L89_01555 C0L89_01615 SM00729 Elongator protein 3, MiaB family, Radical SAM C0L89_01615 SM00876 Biotin and Thiamin Synthesis associated domain C0L89_01640 SM00369 Leucine-rich repeats, typical (most populated) subfamily C0L89_01760 SM00382 ATPases associated with a variety of cellular activities C0L89_01840 SM00267 diguanylate cyclase C0L89_01850 SM00642 Alpha-amylase domain C0L89_01855 SM00642 Alpha-amylase domain C0L89_01865 SM00642 Alpha-amylase domain C0L89_01875 SM00642 Alpha-amylase domain C0L89_01920 SM00487 DEAD-like helicases superfamily C0L89_01920 SM00490 helicase superfamily c-terminal domain C0L89_01955 SM00861 Transketolase, pyrimidine binding domain C0L89_01985 SM00347 helix_turn_helix multiple antibiotic resistance protein C0L89_02065 SM00271 DnaJ molecular chaperone homology domain C0L89_02080 SM00046 Diacylglycerol kinase catalytic domain (presumed) C0L89_02110 SM00903 Flavin reductase like domain C0L89_02130 SM00100 Cyclic nucleotide-monophosphate binding domain C0L89_02130 SM00419 helix_turn_helix, cAMP Regulatory protein C0L89_02185 SM00073 Histidine Phosphotransfer domain C0L89_02185 SM00387 Histidine kinase-like ATPases C0L89_02185 SM00388 His Kinase A (phosphoacceptor) domain C0L89_02185 SM00448 cheY-homologous receiver domain C0L89_02190 SM00052 Putative diguanylate phosphodiesterase C0L89_02190 SM00267 diguanylate cyclase C0L89_02190 SM00448 cheY-homologous receiver domain C0L89_02245 SM00563 Phosphate acyltransferases C0L89_02270 SM01209 C0L89_02270 C0L89_02270 SM01210 C0L89_02270 C0L89_02285 SM00798 AICARFT/IMPCHase bienzyme C0L89_02285 SM00851 MGS-like domain C0L89_02315 SM00530 Helix-turn-helix XRE-family like proteins C0L89_02355 SM00878 Biotin carboxylase C-terminal domain C0L89_02405 SM00487 DEAD-like helicases superfamily C0L89_02405 SM00490 helicase superfamily c-terminal domain C0L89_02460 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain C0L89_02460 SM00437 Bacterial DNA topoisomerase I DNA-binding domain C0L89_02460 SM00493 C0L89_02460 C0L89_02485 SM00257 Lysin motif C0L89_02645 SM00530 Helix-turn-helix XRE-family like proteins C0L89_02795 SM00530 Helix-turn-helix XRE-family like proteins C0L89_02855 SM00357 Cold shock protein domain C0L89_02855 SM00382 ATPases associated with a variety of cellular activities C0L89_02855 SM00959 Rho termination factor, N-terminal domain C0L89_02865 SM00487 DEAD-like helicases superfamily C0L89_02865 SM00490 helicase superfamily c-terminal domain C0L89_02870 SM00382 ATPases associated with a variety of cellular activities C0L89_02880 SM00448 cheY-homologous receiver domain C0L89_02885 SM00986 Uracil DNA glycosylase superfamily C0L89_02885 SM00987 UreE urease accessory protein, C-terminal domain C0L89_02920 SM00883 Chaperonin 10 Kd subunit C0L89_03020 SM00867 YceI-like domain C0L89_03195 SM00060 Fibronectin type 3 domain C0L89_03280 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C0L89_03290 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C0L89_03290 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C0L89_03290 SM00091 PAS domain C0L89_03290 SM00267 diguanylate cyclase C0L89_03315 SM00637 C0L89_03315 C0L89_03325 SM00267 diguanylate cyclase C0L89_03360 SM00448 cheY-homologous receiver domain C0L89_03360 SM00850 LytTr DNA-binding domain C0L89_03445 SM00382 ATPases associated with a variety of cellular activities C0L89_03445 SM01086 C-terminal, D2-small domain, of ClpB protein C0L89_03475 SM00267 diguanylate cyclase C0L89_03480 SM01263 C0L89_03480 C0L89_03500 SM00268 Actin C0L89_03540 SM00710 Parallel beta-helix repeats C0L89_03555 SM00936 Penicillin-binding protein 5, C-terminal domain C0L89_03580 SM00729 Elongator protein 3, MiaB family, Radical SAM C0L89_03585 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C0L89_03585 SM00245 tail specific protease C0L89_03630 SM01350 C0L89_03630 C0L89_03640 SM00749 bacterial OsmY and nodulation domain C0L89_03645 SM00387 Histidine kinase-like ATPases C0L89_03645 SM00388 His Kinase A (phosphoacceptor) domain C0L89_03650 SM00448 cheY-homologous receiver domain C0L89_03655 SM00387 Histidine kinase-like ATPases C0L89_03655 SM00388 His Kinase A (phosphoacceptor) domain C0L89_03655 SM00448 cheY-homologous receiver domain C0L89_03715 SM00345 helix_turn_helix gluconate operon transcriptional repressor C0L89_03715 SM00866 C0L89_03715 C0L89_03725 SM00354 helix_turn _helix lactose operon repressor C0L89_03860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C0L89_03860 SM00387 Histidine kinase-like ATPases C0L89_03860 SM00388 His Kinase A (phosphoacceptor) domain C0L89_03865 SM00448 cheY-homologous receiver domain C0L89_03865 SM00862 Transcriptional regulatory protein, C terminal C0L89_03885 SM00829 Enoylreductase C0L89_03920 SM00382 ATPases associated with a variety of cellular activities C0L89_04030 SM00387 Histidine kinase-like ATPases C0L89_04030 SM00388 His Kinase A (phosphoacceptor) domain C0L89_04035 SM00448 cheY-homologous receiver domain C0L89_04035 SM00862 Transcriptional regulatory protein, C terminal C0L89_04170 SM00842 Cell division protein FtsA C0L89_04175 SM00864 Tubulin/FtsZ family, GTPase domain C0L89_04175 SM00865 Tubulin/FtsZ family, C-terminal domain C0L89_04195 SM00957 SecA DEAD-like domain C0L89_04195 SM00958 SecA preprotein cross-linking domain C0L89_04235 SM00829 Enoylreductase C0L89_04240 SM00944 Pro-kumamolisin, activation domain C0L89_04300 SM00996 S-adenosyl-L-homocysteine hydrolase C0L89_04300 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C0L89_04435 SM00382 ATPases associated with a variety of cellular activities C0L89_04455 SM00382 ATPases associated with a variety of cellular activities C0L89_04465 SM00448 cheY-homologous receiver domain C0L89_04465 SM00862 Transcriptional regulatory protein, C terminal C0L89_04470 SM00387 Histidine kinase-like ATPases C0L89_04470 SM00388 His Kinase A (phosphoacceptor) domain C0L89_04535 SM00650 Ribosomal RNA adenine dimethylases C0L89_04610 SM00345 helix_turn_helix gluconate operon transcriptional repressor C0L89_04610 SM00895 C0L89_04610 C0L89_04645 SM00347 helix_turn_helix multiple antibiotic resistance protein C0L89_04710 SM00421 helix_turn_helix, Lux Regulon C0L89_04795 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs C0L89_04795 SM00475 5'-3' exonuclease C0L89_04810 SM01002 Alanine dehydrogenase/PNT, C-terminal domain C0L89_04810 SM01003 Alanine dehydrogenase/PNT, N-terminal domain C0L89_04930 SM00852 Probable molybdopterin binding domain C0L89_04935 SM00028 Tetratricopeptide repeats C0L89_04940 SM00937 C0L89_04940 C0L89_04950 SM00028 Tetratricopeptide repeats C0L89_04970 SM01400 C0L89_04970 C0L89_05020 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. C0L89_05020 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. C0L89_05030 SM00649 Ribosomal protein L11/L12 C0L89_05055 SM00663 RNA polymerase I subunit A N-terminus C0L89_05070 SM00838 Elongation factor G C-terminus C0L89_05070 SM00889 Elongation factor G, domain IV C0L89_05090 SM01403 C0L89_05090 C0L89_05110 SM01382 C0L89_05110 C0L89_05110 SM01383 C0L89_05110 C0L89_05125 SM00322 K homology RNA-binding domain C0L89_05145 SM01374 C0L89_05145 C0L89_05150 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. C0L89_05210 SM00363 S4 RNA-binding domain C0L89_05210 SM01390 C0L89_05210 C0L89_05215 SM00662 RNA polymerases D C0L89_05255 SM00838 Elongation factor G C-terminus C0L89_05325 SM00829 Enoylreductase C0L89_05375 SM00382 ATPases associated with a variety of cellular activities C0L89_05385 SM00829 Enoylreductase C0L89_05410 SM00855 Phosphoglycerate mutase family C0L89_05470 SM00014 Acid phosphatase homologues C0L89_05490 SM00387 Histidine kinase-like ATPases C0L89_05490 SM00388 His Kinase A (phosphoacceptor) domain C0L89_05495 SM00448 cheY-homologous receiver domain C0L89_05495 SM00862 Transcriptional regulatory protein, C terminal C0L89_05515 SM01329 C0L89_05515 C0L89_05595 SM00382 ATPases associated with a variety of cellular activities C0L89_05595 SM00994 ClpX C4-type zinc finger C0L89_05595 SM01086 C-terminal, D2-small domain, of ClpB protein C0L89_05600 SM00382 ATPases associated with a variety of cellular activities C0L89_05600 SM00464 Found in ATP-dependent protease La (LON) C0L89_05605 SM00411 bacterial (prokaryotic) histone like domain C0L89_05630 SM00257 Lysin motif C0L89_05635 SM00849 Metallo-beta-lactamase superfamily C0L89_05650 SM00479 C0L89_05650 C0L89_05665 SM00331 Sigma factor PP2C-like phosphatases C0L89_05665 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain C0L89_05705 SM00849 Metallo-beta-lactamase superfamily C0L89_05710 SM00729 Elongator protein 3, MiaB family, Radical SAM C0L89_05760 SM00382 ATPases associated with a variety of cellular activities C0L89_05770 SM00493 C0L89_05770 C0L89_05785 SM00460 Transglutaminase/protease-like homologues C0L89_05795 SM00382 ATPases associated with a variety of cellular activities C0L89_05835 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. C0L89_05840 SM00822 C0L89_05840 C0L89_05850 SM00825 Beta-ketoacyl synthase C0L89_05890 SM00382 ATPases associated with a variety of cellular activities C0L89_05975 SM00271 DnaJ molecular chaperone homology domain C0L89_05980 SM00448 cheY-homologous receiver domain C0L89_05990 SM00244 prohibitin homologues C0L89_05995 SM00244 prohibitin homologues C0L89_06005 SM00788 Adenylosuccinate synthetase C0L89_06050 SM00487 DEAD-like helicases superfamily C0L89_06050 SM00490 helicase superfamily c-terminal domain C0L89_06065 SM00220 Serine/Threonine protein kinases, catalytic domain C0L89_06090 SM00855 Phosphoglycerate mutase family C0L89_06115 SM00966 SpoVT / AbrB like domain C0L89_06135 SM00481 DNA polymerase alpha chain like domain C0L89_06145 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C0L89_06180 SM00091 PAS domain C0L89_06180 SM00342 helix_turn_helix, arabinose operon control protein C0L89_06225 SM01060 C0L89_06225 C0L89_06240 SM00990 C0L89_06240 C0L89_06275 SM00382 ATPases associated with a variety of cellular activities C0L89_06310 SM00448 cheY-homologous receiver domain C0L89_06310 SM00862 Transcriptional regulatory protein, C terminal C0L89_06315 SM00387 Histidine kinase-like ATPases C0L89_06315 SM00388 His Kinase A (phosphoacceptor) domain C0L89_06350 SM00421 helix_turn_helix, Lux Regulon C0L89_06350 SM00448 cheY-homologous receiver domain C0L89_06365 SM00478 endonuclease III C0L89_06555 SM00382 ATPases associated with a variety of cellular activities C0L89_06555 SM01086 C-terminal, D2-small domain, of ClpB protein C0L89_06690 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. C0L89_06700 SM00849 Metallo-beta-lactamase superfamily C0L89_06730 SM00421 helix_turn_helix, Lux Regulon C0L89_06795 SM00924 MgtE intracellular N domain C0L89_06865 SM00382 ATPases associated with a variety of cellular activities C0L89_06885 SM00116 Domain in cystathionine beta-synthase and other proteins. C0L89_07045 SM00382 ATPases associated with a variety of cellular activities C0L89_07060 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain C0L89_07100 SM00411 bacterial (prokaryotic) histone like domain C0L89_07120 SM00382 ATPases associated with a variety of cellular activities C0L89_07165 SM00732 Likely ribonuclease with RNase H fold. C0L89_07250 SM00267 diguanylate cyclase C0L89_07255 SM00829 Enoylreductase C0L89_07415 SM00855 Phosphoglycerate mutase family C0L89_07425 SM00448 cheY-homologous receiver domain C0L89_07430 SM00138 Methyltransferase, chemotaxis proteins C0L89_07435 SM00052 Putative diguanylate phosphodiesterase C0L89_07435 SM00448 cheY-homologous receiver domain C0L89_07440 SM00260 Two component signalling adaptor domain C0L89_07445 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C0L89_07445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C0L89_07455 SM00073 Histidine Phosphotransfer domain C0L89_07455 SM00260 Two component signalling adaptor domain C0L89_07455 SM00387 Histidine kinase-like ATPases C0L89_07455 SM01231 C0L89_07455 C0L89_07465 SM00487 DEAD-like helicases superfamily C0L89_07465 SM00490 helicase superfamily c-terminal domain C0L89_07465 SM00982 C0L89_07465 C0L89_07465 SM01058 CarD-like/TRCF domain C0L89_07485 SM00645 Papain family cysteine protease C0L89_07620 SM00829 Enoylreductase C0L89_07680 SM00487 DEAD-like helicases superfamily C0L89_07680 SM00490 helicase superfamily c-terminal domain C0L89_07685 SM00052 Putative diguanylate phosphodiesterase C0L89_07685 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C0L89_07685 SM00091 PAS domain C0L89_07685 SM00267 diguanylate cyclase C0L89_07690 SM00363 S4 RNA-binding domain C0L89_07725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C0L89_07725 SM00387 Histidine kinase-like ATPases C0L89_07725 SM00388 His Kinase A (phosphoacceptor) domain C0L89_07730 SM00448 cheY-homologous receiver domain C0L89_07730 SM00862 Transcriptional regulatory protein, C terminal C0L89_07760 SM00382 ATPases associated with a variety of cellular activities C0L89_07910 SM00316 Ribosomal protein S1-like RNA-binding domain C0L89_07950 SM01351 C0L89_07950 C0L89_07970 SM00977 TilS substrate C-terminal domain C0L89_07975 SM00098 Alkaline phosphatase homologues C0L89_08040 SM01160 C0L89_08040 C0L89_08150 SM00729 Elongator protein 3, MiaB family, Radical SAM C0L89_08200 SM00257 Lysin motif C0L89_08235 SM00859 Semialdehyde dehydrogenase, NAD binding domain C0L89_08305 SM00052 Putative diguanylate phosphodiesterase C0L89_08305 SM00267 diguanylate cyclase C0L89_08305 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C0L89_08345 SM00822 C0L89_08345 C0L89_08390 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C0L89_08395 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C0L89_08445 SM00316 Ribosomal protein S1-like RNA-binding domain C0L89_08445 SM00322 K homology RNA-binding domain C0L89_08465 SM01387 C0L89_08465 C0L89_08470 SM00316 Ribosomal protein S1-like RNA-binding domain C0L89_08470 SM00322 K homology RNA-binding domain C0L89_08490 SM01001 AIR carboxylase C0L89_08580 SM00487 DEAD-like helicases superfamily C0L89_08580 SM00490 helicase superfamily c-terminal domain C0L89_08635 SM00345 helix_turn_helix gluconate operon transcriptional repressor C0L89_08635 SM00866 C0L89_08635 C0L89_08655 SM00240 Forkhead associated domain C0L89_08680 SM00830 Chorismate mutase type II C0L89_08750 SM00966 SpoVT / AbrB like domain C0L89_08795 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C0L89_08795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C0L89_08800 SM01126 C0L89_08800 C0L89_08815 SM00448 cheY-homologous receiver domain C0L89_08820 SM00382 ATPases associated with a variety of cellular activities C0L89_08825 SM00091 PAS domain C0L89_08825 SM00387 Histidine kinase-like ATPases C0L89_08825 SM00388 His Kinase A (phosphoacceptor) domain C0L89_08825 SM00448 cheY-homologous receiver domain C0L89_08975 SM00729 Elongator protein 3, MiaB family, Radical SAM C0L89_08985 SM00382 ATPases associated with a variety of cellular activities C0L89_09030 SM01091 Transporter associated domain C0L89_09065 SM00387 Histidine kinase-like ATPases C0L89_09065 SM00433 TopoisomeraseII C0L89_09085 SM01192 C0L89_09085 C0L89_09085 SM01193 C0L89_09085 C0L89_09115 SM00463 Small MutS-related domain C0L89_09135 SM00257 Lysin motif C0L89_09145 SM01103 C0L89_09145 C0L89_09155 SM00382 ATPases associated with a variety of cellular activities C0L89_09195 SM00382 ATPases associated with a variety of cellular activities C0L89_09210 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain C0L89_09265 SM00507 HNH nucleases C0L89_09310 SM00670 Large family of predicted nucleotide-binding domains C0L89_09330 SM01130 C0L89_09330 C0L89_09355 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C0L89_09415 SM00646 C0L89_09415 C0L89_09500 SM00052 Putative diguanylate phosphodiesterase C0L89_09500 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C0L89_09500 SM00267 diguanylate cyclase C0L89_09520 SM00448 cheY-homologous receiver domain C0L89_09525 SM00387 Histidine kinase-like ATPases C0L89_09535 SM00014 Acid phosphatase homologues C0L89_09760 SM01007 Class II Aldolase and Adducin N-terminal domain C0L89_09810 SM00841 Elongation factor P, C-terminal C0L89_09810 SM01185 C0L89_09810 C0L89_09815 SM00822 C0L89_09815 C0L89_09835 SM00899 C0L89_09835 C0L89_09875 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain C0L89_09885 SM00851 MGS-like domain C0L89_09885 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C0L89_09915 SM00850 LytTr DNA-binding domain C0L89_09930 SM00448 cheY-homologous receiver domain C0L89_09930 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C0L89_09940 SM00073 Histidine Phosphotransfer domain C0L89_09940 SM00387 Histidine kinase-like ATPases C0L89_09940 SM00388 His Kinase A (phosphoacceptor) domain C0L89_09940 SM00448 cheY-homologous receiver domain C0L89_09965 SM00966 SpoVT / AbrB like domain C0L89_09990 SM00052 Putative diguanylate phosphodiesterase C0L89_09990 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C0L89_09990 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C0L89_09990 SM00091 PAS domain C0L89_09990 SM00267 diguanylate cyclase C0L89_09995 SM00448 cheY-homologous receiver domain C0L89_10005 SM00138 Methyltransferase, chemotaxis proteins C0L89_10010 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C0L89_10010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C0L89_10020 SM00260 Two component signalling adaptor domain C0L89_10035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C0L89_10035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C0L89_10040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C0L89_10040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C0L89_10045 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C0L89_10045 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C0L89_10060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C0L89_10060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C0L89_10070 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C0L89_10070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C0L89_10075 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C0L89_10105 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C0L89_10105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C0L89_10125 SM00073 Histidine Phosphotransfer domain C0L89_10125 SM00260 Two component signalling adaptor domain C0L89_10125 SM00387 Histidine kinase-like ATPases C0L89_10125 SM01231 C0L89_10125 C0L89_10130 SM00448 cheY-homologous receiver domain C0L89_10140 SM00260 Two component signalling adaptor domain C0L89_10280 SM00073 Histidine Phosphotransfer domain C0L89_10280 SM00260 Two component signalling adaptor domain C0L89_10280 SM00387 Histidine kinase-like ATPases C0L89_10280 SM01231 C0L89_10280 C0L89_10290 SM00448 cheY-homologous receiver domain C0L89_10305 SM00382 ATPases associated with a variety of cellular activities C0L89_10305 SM00962 SRP54-type protein, GTPase domain C0L89_10320 SM00052 Putative diguanylate phosphodiesterase C0L89_10320 SM00267 diguanylate cyclase C0L89_10325 SM00267 diguanylate cyclase C0L89_10330 SM00267 diguanylate cyclase C0L89_10380 SM00382 ATPases associated with a variety of cellular activities C0L89_10440 SM00822 C0L89_10440 C0L89_10460 SM00382 ATPases associated with a variety of cellular activities C0L89_10465 SM00448 cheY-homologous receiver domain C0L89_10475 SM00421 helix_turn_helix, Lux Regulon C0L89_10475 SM00448 cheY-homologous receiver domain C0L89_10515 SM00047 Lysozyme subfamily 2 C0L89_10565 SM00260 Two component signalling adaptor domain C0L89_10565 SM00448 cheY-homologous receiver domain C0L89_10570 SM00858 C0L89_10570 C0L89_10585 SM00387 Histidine kinase-like ATPases C0L89_10590 SM00052 Putative diguanylate phosphodiesterase C0L89_10590 SM00267 diguanylate cyclase C0L89_10590 SM00448 cheY-homologous receiver domain C0L89_10595 SM00091 PAS domain C0L89_10595 SM00387 Histidine kinase-like ATPases C0L89_10600 SM00052 Putative diguanylate phosphodiesterase C0L89_10600 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C0L89_10600 SM00091 PAS domain C0L89_10600 SM00267 diguanylate cyclase C0L89_10620 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C0L89_10645 SM00382 ATPases associated with a variety of cellular activities C0L89_10645 SM01086 C-terminal, D2-small domain, of ClpB protein C0L89_10650 SM00316 Ribosomal protein S1-like RNA-binding domain C0L89_10675 SM00382 ATPases associated with a variety of cellular activities C0L89_10675 SM00843 C0L89_10675 C0L89_10700 SM00382 ATPases associated with a variety of cellular activities C0L89_10740 SM00562 C0L89_10740 C0L89_10750 SM00028 Tetratricopeptide repeats C0L89_10765 SM00564 beta-propeller repeat C0L89_10770 SM00382 ATPases associated with a variety of cellular activities C0L89_10775 SM00852 Probable molybdopterin binding domain C0L89_10785 SM00450 Rhodanese Homology Domain C0L89_10825 SM00852 Probable molybdopterin binding domain C0L89_10920 SM00052 Putative diguanylate phosphodiesterase C0L89_10925 SM00869 Autotransporter beta-domain C0L89_10930 SM00421 helix_turn_helix, Lux Regulon C0L89_10930 SM00448 cheY-homologous receiver domain C0L89_10935 SM00387 Histidine kinase-like ATPases C0L89_10935 SM00388 His Kinase A (phosphoacceptor) domain C0L89_10960 SM00869 Autotransporter beta-domain C0L89_11010 SM00342 helix_turn_helix, arabinose operon control protein C0L89_11015 SM00823 Phosphopantetheine attachment site C0L89_11025 SM00823 Phosphopantetheine attachment site C0L89_11030 SM00823 Phosphopantetheine attachment site C0L89_11040 SM00823 Phosphopantetheine attachment site C0L89_11045 SM00823 Phosphopantetheine attachment site C0L89_11050 SM00823 Phosphopantetheine attachment site C0L89_11050 SM00824 Thioesterase C0L89_11085 SM00382 ATPases associated with a variety of cellular activities C0L89_11090 SM00923 MbtH-like protein C0L89_11175 SM00448 cheY-homologous receiver domain C0L89_11175 SM00862 Transcriptional regulatory protein, C terminal C0L89_11185 SM00387 Histidine kinase-like ATPases C0L89_11215 SM00331 Sigma factor PP2C-like phosphatases C0L89_11215 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain C0L89_11240 SM00240 Forkhead associated domain C0L89_11290 SM00382 ATPases associated with a variety of cellular activities C0L89_11290 SM01086 C-terminal, D2-small domain, of ClpB protein C0L89_11400 SM00363 S4 RNA-binding domain C0L89_11405 SM00316 Ribosomal protein S1-like RNA-binding domain C0L89_11415 SM00421 helix_turn_helix, Lux Regulon C0L89_11415 SM00448 cheY-homologous receiver domain C0L89_11420 SM00450 Rhodanese Homology Domain C0L89_11440 SM00984 UDP binding domain C0L89_11480 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C0L89_11480 SM00465 GIY-YIG type nucleases (URI domain) C0L89_11490 SM00226 Low molecular weight phosphatase family C0L89_11505 SM00382 ATPases associated with a variety of cellular activities C0L89_11520 SM00849 Metallo-beta-lactamase superfamily C0L89_11535 SM00382 ATPases associated with a variety of cellular activities C0L89_11595 SM00382 ATPases associated with a variety of cellular activities C0L89_11695 SM00448 cheY-homologous receiver domain C0L89_11700 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C0L89_11700 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C0L89_11700 SM00091 PAS domain C0L89_11700 SM00387 Histidine kinase-like ATPases C0L89_11700 SM00388 His Kinase A (phosphoacceptor) domain C0L89_11700 SM00448 cheY-homologous receiver domain C0L89_11715 SM00316 Ribosomal protein S1-like RNA-binding domain C0L89_11715 SM00732 Likely ribonuclease with RNase H fold. C0L89_11785 SM00479 C0L89_11785 C0L89_11795 SM00529 Helix-turn-helix diphteria tox regulatory element C0L89_11820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C0L89_11875 SM00116 Domain in cystathionine beta-synthase and other proteins. C0L89_11875 SM01240 C0L89_11875 C0L89_11900 SM00822 C0L89_11900 C0L89_11920 SM00411 bacterial (prokaryotic) histone like domain C0L89_11925 SM00316 Ribosomal protein S1-like RNA-binding domain C0L89_12005 SM00354 helix_turn _helix lactose operon repressor C0L89_12030 SM00363 S4 RNA-binding domain C0L89_12055 SM00382 ATPases associated with a variety of cellular activities C0L89_12105 SM00357 Cold shock protein domain C0L89_12115 SM00382 ATPases associated with a variety of cellular activities C0L89_12120 SM00382 ATPases associated with a variety of cellular activities C0L89_12160 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain C0L89_12170 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase C0L89_12190 SM00859 Semialdehyde dehydrogenase, NAD binding domain C0L89_12225 SM00840 C0L89_12225 C0L89_12250 SM01234 C0L89_12250 C0L89_12335 SM00841 Elongation factor P, C-terminal C0L89_12335 SM01185 C0L89_12335 C0L89_12345 SM00052 Putative diguanylate phosphodiesterase C0L89_12345 SM00267 diguanylate cyclase C0L89_12345 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C0L89_12390 SM00382 ATPases associated with a variety of cellular activities C0L89_12395 SM00487 DEAD-like helicases superfamily C0L89_12395 SM00490 helicase superfamily c-terminal domain C0L89_12420 SM00357 Cold shock protein domain C0L89_12430 SM01322 C0L89_12430 C0L89_12440 SM00052 Putative diguanylate phosphodiesterase C0L89_12440 SM00267 diguanylate cyclase C0L89_12455 SM00822 C0L89_12455 C0L89_12475 SM00853 MutL C terminal dimerisation domain C0L89_12475 SM01340 C0L89_12475 C0L89_12480 SM00646 C0L89_12480 C0L89_12540 SM00474 3'-5' exonuclease C0L89_12555 SM00528 Domain in histone-like proteins of HNS family C0L89_12570 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C0L89_12570 SM00267 diguanylate cyclase C0L89_12575 SM00260 Two component signalling adaptor domain C0L89_12580 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C0L89_12580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C0L89_12660 SM00729 Elongator protein 3, MiaB family, Radical SAM C0L89_12685 SM00116 Domain in cystathionine beta-synthase and other proteins. C0L89_12685 SM01091 Transporter associated domain C0L89_12720 SM00382 ATPases associated with a variety of cellular activities C0L89_12765 SM01230 C0L89_12765 C0L89_12775 SM01230 C0L89_12775 C0L89_12785 SM00267 diguanylate cyclase C0L89_12785 SM00448 cheY-homologous receiver domain C0L89_12840 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C0L89_12840 SM00091 PAS domain C0L89_12840 SM00387 Histidine kinase-like ATPases C0L89_12840 SM00388 His Kinase A (phosphoacceptor) domain C0L89_12840 SM00448 cheY-homologous receiver domain C0L89_12840 SM01079 C0L89_12840 C0L89_12885 SM00354 helix_turn _helix lactose operon repressor C0L89_12975 SM01323 C0L89_12975 C0L89_12990 SM00344 helix_turn_helix ASNC type C0L89_13075 SM00387 Histidine kinase-like ATPases C0L89_13135 SM00944 Pro-kumamolisin, activation domain C0L89_13195 SM01130 C0L89_13195 C0L89_13220 SM00342 helix_turn_helix, arabinose operon control protein C0L89_13225 SM00382 ATPases associated with a variety of cellular activities C0L89_13225 SM00962 SRP54-type protein, GTPase domain C0L89_13225 SM00963 SRP54-type protein, helical bundle domain C0L89_13240 SM00478 endonuclease III C0L89_13250 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C0L89_13250 SM00091 PAS domain C0L89_13250 SM00387 Histidine kinase-like ATPases C0L89_13250 SM00388 His Kinase A (phosphoacceptor) domain C0L89_13250 SM00448 cheY-homologous receiver domain C0L89_13295 SM00507 HNH nucleases C0L89_13300 SM00861 Transketolase, pyrimidine binding domain C0L89_13385 SM00422 helix_turn_helix, mercury resistance C0L89_13390 SM00411 bacterial (prokaryotic) histone like domain C0L89_13395 SM00873 B3/4 domain C0L89_13395 SM00874 tRNA synthetase B5 domain C0L89_13395 SM00896 Ferredoxin-fold anticodon binding domain C0L89_13420 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain C0L89_13435 SM00434 DNA Topoisomerase IV C0L89_13460 SM00292 breast cancer carboxy-terminal domain C0L89_13460 SM00532 Ligase N family C0L89_13470 SM00771 ZipA, C-terminal domain (FtsZ-binding) C0L89_13475 SM00968 SMC proteins Flexible Hinge Domain C0L89_13530 SM00947 Carbonic anhydrase C0L89_13565 SM00479 C0L89_13565 C0L89_13605 SM00981 C0L89_13605 C0L89_13635 SM00644 C0L89_13635 C0L89_13645 SM00450 Rhodanese Homology Domain C0L89_13670 SM00478 endonuclease III C0L89_13680 SM00947 Carbonic anhydrase C0L89_13715 SM00382 ATPases associated with a variety of cellular activities C0L89_13730 SM00479 C0L89_13730 C0L89_13740 SM00967 RNA 2'-O ribose methyltransferase substrate binding C0L89_13755 SM00316 Ribosomal protein S1-like RNA-binding domain C0L89_13755 SM00357 Cold shock protein domain C0L89_13755 SM00955 C0L89_13755 C0L89_13790 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C0L89_13800 SM01018 B12 binding domain C0L89_13820 SM00354 helix_turn _helix lactose operon repressor C0L89_13840 SM00984 UDP binding domain C0L89_13860 SM00345 helix_turn_helix gluconate operon transcriptional repressor C0L89_13865 SM00382 ATPases associated with a variety of cellular activities C0L89_13930 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C0L89_13935 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. C0L89_13945 SM00861 Transketolase, pyrimidine binding domain C0L89_13970 SM00382 ATPases associated with a variety of cellular activities C0L89_14010 SM00271 DnaJ molecular chaperone homology domain C0L89_14155 SM01230 C0L89_14155 C0L89_14200 SM00267 diguanylate cyclase C0L89_14300 SM00357 Cold shock protein domain C0L89_14325 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C0L89_14325 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C0L89_14375 SM00382 ATPases associated with a variety of cellular activities C0L89_14425 SM00347 helix_turn_helix multiple antibiotic resistance protein C0L89_14455 SM00631 C0L89_14455 C0L89_14460 SM01217 C0L89_14460 C0L89_14500 SM00347 helix_turn_helix multiple antibiotic resistance protein C0L89_14505 SM00342 helix_turn_helix, arabinose operon control protein C0L89_14510 SM00434 DNA Topoisomerase IV C0L89_14540 SM00710 Parallel beta-helix repeats C0L89_14540 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses C0L89_14545 SM01172 C0L89_14545 C0L89_14575 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C0L89_14585 SM00972 Spore Coat Protein U domain C0L89_14600 SM00972 Spore Coat Protein U domain C0L89_14655 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C0L89_14695 SM00481 DNA polymerase alpha chain like domain C0L89_15030 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C0L89_15035 SM00869 Autotransporter beta-domain C0L89_15055 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C0L89_15055 SM00267 diguanylate cyclase C0L89_15085 SM00487 DEAD-like helicases superfamily C0L89_15085 SM00490 helicase superfamily c-terminal domain C0L89_15105 SM00357 Cold shock protein domain C0L89_15140 SM01118 C0L89_15140 C0L89_15150 SM00448 cheY-homologous receiver domain C0L89_15165 SM00358 Double-stranded RNA binding motif C0L89_15165 SM00535 Ribonuclease III family C0L89_15180 SM00838 Elongation factor G C-terminus C0L89_15185 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C0L89_15235 SM00530 Helix-turn-helix XRE-family like proteins C0L89_15265 SM00812 Alpha-L-fucosidase C0L89_15275 SM00387 Histidine kinase-like ATPases C0L89_15275 SM00388 His Kinase A (phosphoacceptor) domain C0L89_15275 SM00448 cheY-homologous receiver domain C0L89_15285 SM00387 Histidine kinase-like ATPases C0L89_15285 SM00388 His Kinase A (phosphoacceptor) domain C0L89_15285 SM00448 cheY-homologous receiver domain C0L89_15290 SM00387 Histidine kinase-like ATPases C0L89_15290 SM00388 His Kinase A (phosphoacceptor) domain C0L89_15290 SM00448 cheY-homologous receiver domain C0L89_15295 SM00387 Histidine kinase-like ATPases C0L89_15295 SM00388 His Kinase A (phosphoacceptor) domain C0L89_15295 SM00448 cheY-homologous receiver domain C0L89_15300 SM00867 YceI-like domain C0L89_15310 SM00867 YceI-like domain C0L89_15375 SM00116 Domain in cystathionine beta-synthase and other proteins. C0L89_15460 SM00244 prohibitin homologues C0L89_15510 SM00812 Alpha-L-fucosidase C0L89_15515 SM00636 C0L89_15515 C0L89_15535 SM00758 C0L89_15535 C0L89_15535 SM01217 C0L89_15535 C0L89_15540 SM00382 ATPases associated with a variety of cellular activities C0L89_15565 SM01149 C0L89_15565 C0L89_15610 SM00369 Leucine-rich repeats, typical (most populated) subfamily C0L89_15630 SM00327 von Willebrand factor (vWF) type A domain C0L89_15645 SM00260 Two component signalling adaptor domain C0L89_15655 SM00073 Histidine Phosphotransfer domain C0L89_15655 SM00260 Two component signalling adaptor domain C0L89_15655 SM00387 Histidine kinase-like ATPases C0L89_15655 SM00448 cheY-homologous receiver domain C0L89_15655 SM01231 C0L89_15655 C0L89_15660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C0L89_15665 SM00260 Two component signalling adaptor domain C0L89_15670 SM00448 cheY-homologous receiver domain C0L89_15675 SM00448 cheY-homologous receiver domain C0L89_15700 SM00491 C0L89_15700 C0L89_15725 SM00954 Region found in RelA / SpoT proteins C0L89_15775 SM00382 ATPases associated with a variety of cellular activities C0L89_15775 SM00487 DEAD-like helicases superfamily C0L89_15775 SM00490 helicase superfamily c-terminal domain C0L89_15775 SM00847 Helicase associated domain (HA2) Add an annotation C0L89_15795 SM00341 Helicase and RNase D C-terminal C0L89_15795 SM00487 DEAD-like helicases superfamily C0L89_15795 SM00490 helicase superfamily c-terminal domain C0L89_15795 SM00956 C0L89_15795 C0L89_15805 SM00448 cheY-homologous receiver domain C0L89_15850 SM00448 cheY-homologous receiver domain C0L89_15925 SM00382 ATPases associated with a variety of cellular activities C0L89_15935 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C0L89_15970 SM00834 Putative regulatory protein C0L89_16010 SM00382 ATPases associated with a variety of cellular activities C0L89_16070 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C0L89_16075 SM00849 Metallo-beta-lactamase superfamily C0L89_16125 SM00855 Phosphoglycerate mutase family C0L89_16195 SM00382 ATPases associated with a variety of cellular activities C0L89_16195 SM01086 C-terminal, D2-small domain, of ClpB protein C0L89_16210 SM00533 DNA-binding domain of DNA mismatch repair MUTS family C0L89_16210 SM00534 ATPase domain of DNA mismatch repair MUTS family C0L89_16225 SM00363 S4 RNA-binding domain C0L89_16280 SM00382 ATPases associated with a variety of cellular activities C0L89_16280 SM00962 SRP54-type protein, GTPase domain C0L89_16280 SM00963 SRP54-type protein, helical bundle domain C0L89_16295 SM00813 Alpha-L-arabinofuranosidase C-terminus C0L89_16310 SM00387 Histidine kinase-like ATPases C0L89_16310 SM00388 His Kinase A (phosphoacceptor) domain C0L89_16310 SM00448 cheY-homologous receiver domain C0L89_16315 SM00387 Histidine kinase-like ATPases C0L89_16315 SM00388 His Kinase A (phosphoacceptor) domain C0L89_16350 SM00342 helix_turn_helix, arabinose operon control protein C0L89_16355 SM00862 Transcriptional regulatory protein, C terminal C0L89_16370 SM00382 ATPases associated with a variety of cellular activities C0L89_16405 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C0L89_16580 SM00564 beta-propeller repeat C0L89_16635 SM00881 CoA binding domain C0L89_16645 SM00387 Histidine kinase-like ATPases C0L89_16645 SM00388 His Kinase A (phosphoacceptor) domain C0L89_16650 SM00382 ATPases associated with a variety of cellular activities C0L89_16650 SM00448 cheY-homologous receiver domain C0L89_16705 SM00387 Histidine kinase-like ATPases C0L89_16705 SM00388 His Kinase A (phosphoacceptor) domain C0L89_16710 SM00448 cheY-homologous receiver domain C0L89_16710 SM00862 Transcriptional regulatory protein, C terminal C0L89_16725 SM00642 Alpha-amylase domain C0L89_16735 SM00528 Domain in histone-like proteins of HNS family C0L89_16880 SM00967 RNA 2'-O ribose methyltransferase substrate binding C0L89_16950 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C0L89_16950 SM00387 Histidine kinase-like ATPases C0L89_16995 SM00506 Appr-1"-p processing enzyme C0L89_17040 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C0L89_17055 SM00849 Metallo-beta-lactamase superfamily C0L89_17070 SM00382 ATPases associated with a variety of cellular activities C0L89_17090 SM00387 Histidine kinase-like ATPases C0L89_17090 SM00388 His Kinase A (phosphoacceptor) domain C0L89_17095 SM00448 cheY-homologous receiver domain C0L89_17095 SM00862 Transcriptional regulatory protein, C terminal C0L89_17165 SM00861 Transketolase, pyrimidine binding domain C0L89_17190 SM00028 Tetratricopeptide repeats C0L89_17190 SM00327 von Willebrand factor (vWF) type A domain C0L89_17195 SM00327 von Willebrand factor (vWF) type A domain C0L89_17210 SM00382 ATPases associated with a variety of cellular activities C0L89_17220 SM00965 Secretin and TonB N terminus short domain C0L89_17280 SM00487 DEAD-like helicases superfamily C0L89_17280 SM00490 helicase superfamily c-terminal domain C0L89_17290 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C0L89_17290 SM00954 Region found in RelA / SpoT proteins C0L89_17295 SM01409 C0L89_17295 C0L89_17305 SM00072 Guanylate kinase homologues. C0L89_17330 SM00729 Elongator protein 3, MiaB family, Radical SAM C0L89_17360 SM01011 Aminopeptidase P, N-terminal domain C0L89_17440 SM00028 Tetratricopeptide repeats C0L89_17440 SM00382 ATPases associated with a variety of cellular activities C0L89_17440 SM00421 helix_turn_helix, Lux Regulon C0L89_17530 SM00464 Found in ATP-dependent protease La (LON) C0L89_17555 SM01126 C0L89_17555 C0L89_17595 SM00342 helix_turn_helix, arabinose operon control protein C0L89_17600 SM00862 Transcriptional regulatory protein, C terminal C0L89_17635 SM00917 LeuA allosteric (dimerisation) domain C0L89_17640 SM01329 C0L89_17640 C0L89_17710 SM00382 ATPases associated with a variety of cellular activities C0L89_17735 SM00530 Helix-turn-helix XRE-family like proteins C0L89_17760 SM00919 Malic enzyme, NAD binding domain C0L89_17760 SM01274 C0L89_17760 C0L89_17780 SM00387 Histidine kinase-like ATPases C0L89_17780 SM00388 His Kinase A (phosphoacceptor) domain C0L89_17780 SM00448 cheY-homologous receiver domain C0L89_17815 SM00421 helix_turn_helix, Lux Regulon C0L89_17815 SM00448 cheY-homologous receiver domain C0L89_17825 SM00387 Histidine kinase-like ATPases C0L89_17825 SM00388 His Kinase A (phosphoacceptor) domain C0L89_17830 SM00448 cheY-homologous receiver domain C0L89_17830 SM00862 Transcriptional regulatory protein, C terminal C0L89_17850 SM00822 C0L89_17850 C0L89_17860 SM00354 helix_turn _helix lactose operon repressor C0L89_17875 SM00642 Alpha-amylase domain C0L89_17885 SM01154 C0L89_17885 C0L89_17920 SM00450 Rhodanese Homology Domain C0L89_18085 SM00345 helix_turn_helix gluconate operon transcriptional repressor C0L89_18085 SM00866 C0L89_18085 C0L89_18155 SM00382 ATPases associated with a variety of cellular activities C0L89_18175 SM01211 C0L89_18175 C0L89_18330 SM00528 Domain in histone-like proteins of HNS family C0L89_18345 SM00382 ATPases associated with a variety of cellular activities C0L89_18385 SM00882 Coenzyme A transferase C0L89_18390 SM00882 Coenzyme A transferase C0L89_18430 SM00893 Electron transfer flavoprotein domain C0L89_18435 SM00893 Electron transfer flavoprotein domain C0L89_18445 SM00382 ATPases associated with a variety of cellular activities C0L89_18495 SM00116 Domain in cystathionine beta-synthase and other proteins. C0L89_18535 SM00487 DEAD-like helicases superfamily C0L89_18535 SM00490 helicase superfamily c-terminal domain C0L89_18560 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C0L89_18595 SM00825 Beta-ketoacyl synthase C0L89_18710 SM00830 Chorismate mutase type II C0L89_18720 SM00382 ATPases associated with a variety of cellular activities C0L89_18790 SM00986 Uracil DNA glycosylase superfamily C0L89_18790 SM00987 UreE urease accessory protein, C-terminal domain C0L89_18820 SM00382 ATPases associated with a variety of cellular activities C0L89_18820 SM00930 C0L89_18820 C0L89_18905 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C0L89_18905 SM00091 PAS domain C0L89_18905 SM00387 Histidine kinase-like ATPases C0L89_18905 SM00388 His Kinase A (phosphoacceptor) domain C0L89_18905 SM00448 cheY-homologous receiver domain C0L89_18925 SM01005 Alanine racemase, C-terminal domain C0L89_18935 SM00344 helix_turn_helix ASNC type C0L89_18980 SM00448 cheY-homologous receiver domain C0L89_18980 SM00862 Transcriptional regulatory protein, C terminal C0L89_18985 SM00387 Histidine kinase-like ATPases C0L89_18985 SM00388 His Kinase A (phosphoacceptor) domain C0L89_19015 SM00382 ATPases associated with a variety of cellular activities C0L89_19030 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. C0L89_19040 SM00986 Uracil DNA glycosylase superfamily C0L89_19040 SM00987 UreE urease accessory protein, C-terminal domain C0L89_19045 SM00729 Elongator protein 3, MiaB family, Radical SAM C0L89_19110 SM00448 cheY-homologous receiver domain C0L89_19110 SM00850 LytTr DNA-binding domain C0L89_19145 SM00091 PAS domain C0L89_19145 SM00138 Methyltransferase, chemotaxis proteins C0L89_19145 SM00911 HWE histidine kinase C0L89_19160 SM00448 cheY-homologous receiver domain C0L89_19170 SM00382 ATPases associated with a variety of cellular activities C0L89_19170 SM00448 cheY-homologous receiver domain C0L89_19280 SM00382 ATPases associated with a variety of cellular activities C0L89_19365 SM01150 C0L89_19365 C0L89_19415 SM00644 C0L89_19415 C0L89_19425 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C0L89_19490 SM01217 C0L89_19490 C0L89_19495 SM00905 Dihydroneopterin aldolase C0L89_19540 SM00400 zinc finger C0L89_19540 SM00493 C0L89_19540 C0L89_19540 SM00766 DNA primase DnaG DnaB-binding C0L89_19860 SM00507 HNH nucleases C0L89_19975 SM00470 ParB-like nuclease domain C0L89_19995 SM01259 C0L89_19995 C0L89_20025 SM00836 DALR anticodon binding domain C0L89_20025 SM01016 Arginyl tRNA synthetase N terminal dom C0L89_20120 SM00938 Nitrogen regulatory protein P-II C0L89_20130 SM00382 ATPases associated with a variety of cellular activities C0L89_20155 SM00052 Putative diguanylate phosphodiesterase C0L89_20260 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C0L89_20310 SM01060 C0L89_20310 C0L89_20360 SM00849 Metallo-beta-lactamase superfamily C0L89_20450 SM00387 Histidine kinase-like ATPases C0L89_20450 SM00388 His Kinase A (phosphoacceptor) domain C0L89_20455 SM00448 cheY-homologous receiver domain C0L89_20455 SM00862 Transcriptional regulatory protein, C terminal C0L89_20510 SM00248 ankyrin repeats C0L89_20515 SM01060 C0L89_20515 C0L89_20540 SM00491 C0L89_20540 C0L89_20580 SM00477 DNA/RNA non-specific endonuclease C0L89_20580 SM00892 DNA/RNA non-specific endonuclease C0L89_20600 SM01004 Delta-aminolevulinic acid dehydratase C0L89_20675 SM00382 ATPases associated with a variety of cellular activities C0L89_20685 SM00530 Helix-turn-helix XRE-family like proteins C0L89_20715 SM00382 ATPases associated with a variety of cellular activities C0L89_20830 SM00881 CoA binding domain C0L89_20840 SM00116 Domain in cystathionine beta-synthase and other proteins. C0L89_20840 SM00924 MgtE intracellular N domain C0L89_20880 SM00248 ankyrin repeats C0L89_20890 SM00825 Beta-ketoacyl synthase C0L89_20915 SM00822 C0L89_20915 C0L89_20950 SM00563 Phosphate acyltransferases C0L89_21015 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs C0L89_21015 SM00474 3'-5' exonuclease C0L89_21015 SM00475 5'-3' exonuclease C0L89_21015 SM00482 DNA polymerase A domain C0L89_21055 SM00342 helix_turn_helix, arabinose operon control protein C0L89_21065 SM01266 C0L89_21065 C0L89_21095 SM00155 Phospholipase D. Active site motifs. C0L89_21220 SM00421 helix_turn_helix, Lux Regulon C0L89_21220 SM00448 cheY-homologous receiver domain C0L89_21275 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C0L89_21300 SM00346 helix_turn_helix isocitrate lyase regulation C0L89_21310 SM00091 PAS domain C0L89_21310 SM00387 Histidine kinase-like ATPases C0L89_21310 SM00388 His Kinase A (phosphoacceptor) domain C0L89_21310 SM00448 cheY-homologous receiver domain C0L89_21335 SM00564 beta-propeller repeat C0L89_21410 SM00836 DALR anticodon binding domain C0L89_21420 SM00382 ATPases associated with a variety of cellular activities C0L89_21515 SM00354 helix_turn _helix lactose operon repressor C0L89_21530 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C0L89_21615 SM00633 Glycosyl hydrolase family 10 C0L89_21685 SM00829 Enoylreductase C0L89_21690 SM00563 Phosphate acyltransferases C0L89_21705 SM00354 helix_turn _helix lactose operon repressor C0L89_21735 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family C0L89_21770 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C0L89_21770 SM00388 His Kinase A (phosphoacceptor) domain C0L89_21785 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain C0L89_21785 SM01232 C0L89_21785 C0L89_21825 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C0L89_21900 SM00347 helix_turn_helix multiple antibiotic resistance protein C0L89_21950 SM00155 Phospholipase D. Active site motifs. C0L89_22195 SM00220 Serine/Threonine protein kinases, catalytic domain C0L89_22195 SM01260 C0L89_22195 C0L89_22210 SM00382 ATPases associated with a variety of cellular activities C0L89_22390 SM00382 ATPases associated with a variety of cellular activities C0L89_22415 SM00382 ATPases associated with a variety of cellular activities C0L89_22435 SM00382 ATPases associated with a variety of cellular activities C0L89_22465 SM00901 C0L89_22465 C0L89_22570 SM00014 Acid phosphatase homologues C0L89_22580 SM00028 Tetratricopeptide repeats