BRN52_00010 SM00480 DNA polymerase III beta subunit BRN52_00025 SM00387 Histidine kinase-like ATPases BRN52_00025 SM00433 TopoisomeraseII BRN52_00040 SM00028 Tetratricopeptide repeats BRN52_00075 SM00155 Phospholipase D. Active site motifs. BRN52_00210 SM01126 BRN52_00210 BRN52_00305 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRN52_00330 SM00369 Leucine-rich repeats, typical (most populated) subfamily BRN52_00445 SM00382 ATPases associated with a variety of cellular activities BRN52_00535 SM00267 diguanylate cyclase BRN52_00545 SM00642 Alpha-amylase domain BRN52_00550 SM00642 Alpha-amylase domain BRN52_00560 SM00642 Alpha-amylase domain BRN52_00570 SM00642 Alpha-amylase domain BRN52_00605 SM01126 BRN52_00605 BRN52_00670 SM00487 DEAD-like helicases superfamily BRN52_00670 SM00490 helicase superfamily c-terminal domain BRN52_00705 SM01126 BRN52_00705 BRN52_00730 SM00382 ATPases associated with a variety of cellular activities BRN52_00765 SM00382 ATPases associated with a variety of cellular activities BRN52_00815 SM00487 DEAD-like helicases superfamily BRN52_00815 SM00490 helicase superfamily c-terminal domain BRN52_00895 SM01126 BRN52_00895 BRN52_00925 SM00354 helix_turn _helix lactose operon repressor BRN52_00955 SM00642 Alpha-amylase domain BRN52_00960 SM00642 Alpha-amylase domain BRN52_00965 SM00642 Alpha-amylase domain BRN52_01030 SM00382 ATPases associated with a variety of cellular activities BRN52_01040 SM00938 Nitrogen regulatory protein P-II BRN52_01065 SM01126 BRN52_01065 BRN52_01120 SM01228 BRN52_01120 BRN52_01190 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRN52_01190 SM00388 His Kinase A (phosphoacceptor) domain BRN52_01225 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BRN52_01245 SM00354 helix_turn _helix lactose operon repressor BRN52_01260 SM00563 Phosphate acyltransferases BRN52_01265 SM00829 Enoylreductase BRN52_01290 SM00530 Helix-turn-helix XRE-family like proteins BRN52_01345 SM00382 ATPases associated with a variety of cellular activities BRN52_01360 SM00382 ATPases associated with a variety of cellular activities BRN52_01390 SM00530 Helix-turn-helix XRE-family like proteins BRN52_01415 SM00855 Phosphoglycerate mutase family BRN52_01420 SM00867 YceI-like domain BRN52_01425 SM00155 Phospholipase D. Active site motifs. BRN52_01435 SM00563 Phosphate acyltransferases BRN52_01450 SM00028 Tetratricopeptide repeats BRN52_01475 SM01230 BRN52_01475 BRN52_01480 SM00938 Nitrogen regulatory protein P-II BRN52_01490 SM00387 Histidine kinase-like ATPases BRN52_01490 SM00388 His Kinase A (phosphoacceptor) domain BRN52_01495 SM00382 ATPases associated with a variety of cellular activities BRN52_01495 SM00448 cheY-homologous receiver domain BRN52_01515 SM01126 BRN52_01515 BRN52_01575 SM00530 Helix-turn-helix XRE-family like proteins BRN52_01635 SM00530 Helix-turn-helix XRE-family like proteins BRN52_01665 SM00347 helix_turn_helix multiple antibiotic resistance protein BRN52_01715 SM00052 Putative diguanylate phosphodiesterase BRN52_01780 SM00633 Glycosyl hydrolase family 10 BRN52_01810 SM00758 BRN52_01810 BRN52_01810 SM01217 BRN52_01810 BRN52_01820 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BRN52_01835 SM00354 helix_turn _helix lactose operon repressor BRN52_01940 SM00382 ATPases associated with a variety of cellular activities BRN52_01950 SM00836 DALR anticodon binding domain BRN52_01995 SM00833 Cobalamin synthesis protein cobW C-terminal domain BRN52_02060 SM00878 Biotin carboxylase C-terminal domain BRN52_02165 SM01126 BRN52_02165 BRN52_02260 SM00448 cheY-homologous receiver domain BRN52_02260 SM00862 Transcriptional regulatory protein, C terminal BRN52_02405 SM00563 Phosphate acyltransferases BRN52_02465 SM00357 Cold shock protein domain BRN52_02465 SM00382 ATPases associated with a variety of cellular activities BRN52_02465 SM00959 Rho termination factor, N-terminal domain BRN52_02475 SM00487 DEAD-like helicases superfamily BRN52_02475 SM00490 helicase superfamily c-terminal domain BRN52_02480 SM00382 ATPases associated with a variety of cellular activities BRN52_02490 SM00448 cheY-homologous receiver domain BRN52_02495 SM00986 Uracil DNA glycosylase superfamily BRN52_02495 SM00987 UreE urease accessory protein, C-terminal domain BRN52_02530 SM00883 Chaperonin 10 Kd subunit BRN52_02580 SM01126 BRN52_02580 BRN52_02645 SM00867 YceI-like domain BRN52_02665 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRN52_02665 SM00331 Sigma factor PP2C-like phosphatases BRN52_02710 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRN52_02745 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BRN52_02745 SM00474 3'-5' exonuclease BRN52_02745 SM00475 5'-3' exonuclease BRN52_02745 SM00482 DNA polymerase A domain BRN52_02815 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRN52_02825 SM00347 helix_turn_helix multiple antibiotic resistance protein BRN52_02915 SM00382 ATPases associated with a variety of cellular activities BRN52_02915 SM00448 cheY-homologous receiver domain BRN52_02920 SM00387 Histidine kinase-like ATPases BRN52_02920 SM00388 His Kinase A (phosphoacceptor) domain BRN52_02945 SM00450 Rhodanese Homology Domain BRN52_02975 SM01150 BRN52_02975 BRN52_03050 SM01126 BRN52_03050 BRN52_03065 SM00382 ATPases associated with a variety of cellular activities BRN52_03125 SM00400 zinc finger BRN52_03125 SM00493 BRN52_03125 BRN52_03125 SM00766 DNA primase DnaG DnaB-binding BRN52_03165 SM00905 Dihydroneopterin aldolase BRN52_03170 SM01217 BRN52_03170 BRN52_03180 SM01126 BRN52_03180 BRN52_03200 SM01126 BRN52_03200 BRN52_03210 SM01126 BRN52_03210 BRN52_03275 SM01126 BRN52_03275 BRN52_03290 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BRN52_03300 SM00644 BRN52_03300 BRN52_03425 SM01126 BRN52_03425 BRN52_03460 SM00347 helix_turn_helix multiple antibiotic resistance protein BRN52_03540 SM00271 DnaJ molecular chaperone homology domain BRN52_03555 SM00046 Diacylglycerol kinase catalytic domain (presumed) BRN52_03650 SM00060 Fibronectin type 3 domain BRN52_03720 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRN52_03730 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRN52_03730 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BRN52_03730 SM00091 PAS domain BRN52_03730 SM00267 diguanylate cyclase BRN52_03750 SM00637 BRN52_03750 BRN52_03810 SM00448 cheY-homologous receiver domain BRN52_03810 SM00850 LytTr DNA-binding domain BRN52_03900 SM00382 ATPases associated with a variety of cellular activities BRN52_03900 SM01086 C-terminal, D2-small domain, of ClpB protein BRN52_03915 SM01263 BRN52_03915 BRN52_03920 SM00267 diguanylate cyclase BRN52_03980 SM00268 Actin BRN52_04045 SM01126 BRN52_04045 BRN52_04085 SM00936 Penicillin-binding protein 5, C-terminal domain BRN52_04105 SM00729 Elongator protein 3, MiaB family, Radical SAM BRN52_04110 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRN52_04110 SM00245 tail specific protease BRN52_04155 SM01350 BRN52_04155 BRN52_04165 SM00749 bacterial OsmY and nodulation domain BRN52_04170 SM00387 Histidine kinase-like ATPases BRN52_04170 SM00388 His Kinase A (phosphoacceptor) domain BRN52_04175 SM00448 cheY-homologous receiver domain BRN52_04180 SM00387 Histidine kinase-like ATPases BRN52_04180 SM00388 His Kinase A (phosphoacceptor) domain BRN52_04180 SM00448 cheY-homologous receiver domain BRN52_04255 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRN52_04255 SM00866 BRN52_04255 BRN52_04265 SM00354 helix_turn _helix lactose operon repressor BRN52_04310 SM01126 BRN52_04310 BRN52_04465 SM00387 Histidine kinase-like ATPases BRN52_04465 SM00388 His Kinase A (phosphoacceptor) domain BRN52_04505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRN52_04505 SM00387 Histidine kinase-like ATPases BRN52_04505 SM00388 His Kinase A (phosphoacceptor) domain BRN52_04510 SM00448 cheY-homologous receiver domain BRN52_04510 SM00862 Transcriptional regulatory protein, C terminal BRN52_04530 SM00829 Enoylreductase BRN52_04560 SM00382 ATPases associated with a variety of cellular activities BRN52_04670 SM00387 Histidine kinase-like ATPases BRN52_04670 SM00388 His Kinase A (phosphoacceptor) domain BRN52_04675 SM00448 cheY-homologous receiver domain BRN52_04675 SM00862 Transcriptional regulatory protein, C terminal BRN52_04780 SM00842 Cell division protein FtsA BRN52_04785 SM00864 Tubulin/FtsZ family, GTPase domain BRN52_04785 SM00865 Tubulin/FtsZ family, C-terminal domain BRN52_04805 SM00957 SecA DEAD-like domain BRN52_04805 SM00958 SecA preprotein cross-linking domain BRN52_04855 SM00829 Enoylreductase BRN52_04915 SM00996 S-adenosyl-L-homocysteine hydrolase BRN52_04915 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BRN52_05055 SM00382 ATPases associated with a variety of cellular activities BRN52_05075 SM00382 ATPases associated with a variety of cellular activities BRN52_05085 SM00448 cheY-homologous receiver domain BRN52_05085 SM00862 Transcriptional regulatory protein, C terminal BRN52_05090 SM00387 Histidine kinase-like ATPases BRN52_05090 SM00388 His Kinase A (phosphoacceptor) domain BRN52_05155 SM00650 Ribosomal RNA adenine dimethylases BRN52_05215 SM01126 BRN52_05215 BRN52_05260 SM00347 helix_turn_helix multiple antibiotic resistance protein BRN52_05360 SM00448 cheY-homologous receiver domain BRN52_05365 SM00387 Histidine kinase-like ATPases BRN52_05365 SM00448 cheY-homologous receiver domain BRN52_05390 SM00421 helix_turn_helix, Lux Regulon BRN52_05435 SM01126 BRN52_05435 BRN52_05515 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BRN52_05515 SM00475 5'-3' exonuclease BRN52_05530 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BRN52_05530 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BRN52_05660 SM00852 Probable molybdopterin binding domain BRN52_05665 SM00028 Tetratricopeptide repeats BRN52_05670 SM00937 BRN52_05670 BRN52_05680 SM00028 Tetratricopeptide repeats BRN52_05700 SM01400 BRN52_05700 BRN52_05750 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BRN52_05750 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BRN52_05760 SM00649 Ribosomal protein L11/L12 BRN52_05785 SM00663 RNA polymerase I subunit A N-terminus BRN52_05800 SM00838 Elongation factor G C-terminus BRN52_05800 SM00889 Elongation factor G, domain IV BRN52_05815 SM01403 BRN52_05815 BRN52_05835 SM01382 BRN52_05835 BRN52_05835 SM01383 BRN52_05835 BRN52_05850 SM00322 K homology RNA-binding domain BRN52_05870 SM01374 BRN52_05870 BRN52_05875 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BRN52_05935 SM00363 S4 RNA-binding domain BRN52_05935 SM01390 BRN52_05935 BRN52_05940 SM00662 RNA polymerases D BRN52_05985 SM00990 BRN52_05985 BRN52_06020 SM00382 ATPases associated with a variety of cellular activities BRN52_06055 SM00448 cheY-homologous receiver domain BRN52_06055 SM00862 Transcriptional regulatory protein, C terminal BRN52_06060 SM00387 Histidine kinase-like ATPases BRN52_06060 SM00388 His Kinase A (phosphoacceptor) domain BRN52_06100 SM00421 helix_turn_helix, Lux Regulon BRN52_06100 SM00448 cheY-homologous receiver domain BRN52_06115 SM00478 endonuclease III BRN52_06415 SM00382 ATPases associated with a variety of cellular activities BRN52_06415 SM01086 C-terminal, D2-small domain, of ClpB protein BRN52_06490 SM00487 DEAD-like helicases superfamily BRN52_06490 SM00490 helicase superfamily c-terminal domain BRN52_06530 SM00487 DEAD-like helicases superfamily BRN52_06540 SM00220 Serine/Threonine protein kinases, catalytic domain BRN52_06590 SM00966 SpoVT / AbrB like domain BRN52_06615 SM00481 DNA polymerase alpha chain like domain BRN52_06625 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRN52_06680 SM00091 PAS domain BRN52_06680 SM00342 helix_turn_helix, arabinose operon control protein BRN52_06710 SM01060 BRN52_06710 BRN52_06785 SM00506 Appr-1"-p processing enzyme BRN52_06840 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRN52_06840 SM00387 Histidine kinase-like ATPases BRN52_06910 SM01126 BRN52_06910 BRN52_06930 SM00967 RNA 2'-O ribose methyltransferase substrate binding BRN52_07030 SM00869 Autotransporter beta-domain BRN52_07075 SM00528 Domain in histone-like proteins of HNS family BRN52_07100 SM01126 BRN52_07100 BRN52_07105 SM01126 BRN52_07105 BRN52_07120 SM00642 Alpha-amylase domain BRN52_07130 SM01126 BRN52_07130 BRN52_07190 SM01126 BRN52_07190 BRN52_07305 SM00316 Ribosomal protein S1-like RNA-binding domain BRN52_07365 SM00977 TilS substrate C-terminal domain BRN52_07370 SM00098 Alkaline phosphatase homologues BRN52_07420 SM01126 BRN52_07420 BRN52_07435 SM01160 BRN52_07435 BRN52_07485 SM00729 Elongator protein 3, MiaB family, Radical SAM BRN52_07525 SM00257 Lysin motif BRN52_07555 SM00859 Semialdehyde dehydrogenase, NAD binding domain BRN52_07625 SM00052 Putative diguanylate phosphodiesterase BRN52_07625 SM00267 diguanylate cyclase BRN52_07625 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRN52_07700 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BRN52_07705 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BRN52_07755 SM00316 Ribosomal protein S1-like RNA-binding domain BRN52_07755 SM00322 K homology RNA-binding domain BRN52_07775 SM01387 BRN52_07775 BRN52_07780 SM00316 Ribosomal protein S1-like RNA-binding domain BRN52_07780 SM00322 K homology RNA-binding domain BRN52_07800 SM01001 AIR carboxylase BRN52_07895 SM00487 DEAD-like helicases superfamily BRN52_07895 SM00490 helicase superfamily c-terminal domain BRN52_07935 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BRN52_07960 SM00873 B3/4 domain BRN52_07960 SM00874 tRNA synthetase B5 domain BRN52_07960 SM00896 Ferredoxin-fold anticodon binding domain BRN52_07965 SM00411 bacterial (prokaryotic) histone like domain BRN52_07970 SM00422 helix_turn_helix, mercury resistance BRN52_08180 SM00478 endonuclease III BRN52_08195 SM00382 ATPases associated with a variety of cellular activities BRN52_08195 SM00962 SRP54-type protein, GTPase domain BRN52_08195 SM00963 SRP54-type protein, helical bundle domain BRN52_08200 SM00342 helix_turn_helix, arabinose operon control protein BRN52_08225 SM01130 BRN52_08225 BRN52_08290 SM00944 Pro-kumamolisin, activation domain BRN52_08375 SM01126 BRN52_08375 BRN52_08395 SM00852 Probable molybdopterin binding domain BRN52_08440 SM01126 BRN52_08440 BRN52_08450 SM01126 BRN52_08450 BRN52_08495 SM00984 UDP binding domain BRN52_08515 SM00450 Rhodanese Homology Domain BRN52_08520 SM00421 helix_turn_helix, Lux Regulon BRN52_08520 SM00448 cheY-homologous receiver domain BRN52_08535 SM00316 Ribosomal protein S1-like RNA-binding domain BRN52_08540 SM00363 S4 RNA-binding domain BRN52_08620 SM01126 BRN52_08620 BRN52_08710 SM00382 ATPases associated with a variety of cellular activities BRN52_08710 SM01086 C-terminal, D2-small domain, of ClpB protein BRN52_08745 SM00240 Forkhead associated domain BRN52_08770 SM00331 Sigma factor PP2C-like phosphatases BRN52_08770 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BRN52_08800 SM00387 Histidine kinase-like ATPases BRN52_08810 SM00448 cheY-homologous receiver domain BRN52_08810 SM00862 Transcriptional regulatory protein, C terminal BRN52_09050 SM00729 Elongator protein 3, MiaB family, Radical SAM BRN52_09060 SM00382 ATPases associated with a variety of cellular activities BRN52_09105 SM01091 Transporter associated domain BRN52_09140 SM00387 Histidine kinase-like ATPases BRN52_09140 SM00433 TopoisomeraseII BRN52_09165 SM01192 BRN52_09165 BRN52_09165 SM01193 BRN52_09165 BRN52_09200 SM00463 Small MutS-related domain BRN52_09220 SM00257 Lysin motif BRN52_09230 SM01103 BRN52_09230 BRN52_09240 SM00382 ATPases associated with a variety of cellular activities BRN52_09280 SM00382 ATPases associated with a variety of cellular activities BRN52_09295 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BRN52_09395 SM00670 Large family of predicted nucleotide-binding domains BRN52_09415 SM01130 BRN52_09415 BRN52_09440 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BRN52_09460 SM00758 BRN52_09460 BRN52_09500 SM00841 Elongation factor P, C-terminal BRN52_09500 SM01185 BRN52_09500 BRN52_09505 SM00822 BRN52_09505 BRN52_09525 SM00899 BRN52_09525 BRN52_09570 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BRN52_09580 SM00851 MGS-like domain BRN52_09580 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BRN52_09655 SM00850 LytTr DNA-binding domain BRN52_09670 SM00448 cheY-homologous receiver domain BRN52_09670 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRN52_09680 SM00073 Histidine Phosphotransfer domain BRN52_09680 SM00387 Histidine kinase-like ATPases BRN52_09680 SM00388 His Kinase A (phosphoacceptor) domain BRN52_09680 SM00448 cheY-homologous receiver domain BRN52_09705 SM00966 SpoVT / AbrB like domain BRN52_09735 SM00052 Putative diguanylate phosphodiesterase BRN52_09735 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRN52_09735 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BRN52_09735 SM00091 PAS domain BRN52_09735 SM00267 diguanylate cyclase BRN52_09740 SM00448 cheY-homologous receiver domain BRN52_09750 SM00138 Methyltransferase, chemotaxis proteins BRN52_09755 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRN52_09755 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRN52_09780 SM00260 Two component signalling adaptor domain BRN52_09800 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRN52_09800 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRN52_09805 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRN52_09805 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRN52_09810 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRN52_09810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRN52_09815 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRN52_09815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRN52_09825 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRN52_09825 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRN52_09830 SM01126 BRN52_09830 BRN52_09840 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRN52_09855 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRN52_09875 SM00073 Histidine Phosphotransfer domain BRN52_09875 SM00260 Two component signalling adaptor domain BRN52_09875 SM00387 Histidine kinase-like ATPases BRN52_09875 SM01231 BRN52_09875 BRN52_09880 SM00448 cheY-homologous receiver domain BRN52_09890 SM00260 Two component signalling adaptor domain BRN52_10100 SM00354 helix_turn _helix lactose operon repressor BRN52_10110 SM01126 BRN52_10110 BRN52_10150 SM00448 cheY-homologous receiver domain BRN52_10150 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRN52_10155 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BRN52_10155 SM00091 PAS domain BRN52_10155 SM00387 Histidine kinase-like ATPases BRN52_10155 SM00388 His Kinase A (phosphoacceptor) domain BRN52_10155 SM00448 cheY-homologous receiver domain BRN52_10155 SM01079 BRN52_10155 BRN52_10210 SM00267 diguanylate cyclase BRN52_10210 SM00448 cheY-homologous receiver domain BRN52_10220 SM01230 BRN52_10220 BRN52_10230 SM01230 BRN52_10230 BRN52_10260 SM00382 ATPases associated with a variety of cellular activities BRN52_10295 SM00116 Domain in cystathionine beta-synthase and other proteins. BRN52_10295 SM01091 Transporter associated domain BRN52_10320 SM00729 Elongator protein 3, MiaB family, Radical SAM BRN52_10405 SM01126 BRN52_10405 BRN52_10475 SM00528 Domain in histone-like proteins of HNS family BRN52_10495 SM00474 3'-5' exonuclease BRN52_10545 SM00646 BRN52_10545 BRN52_10550 SM00853 MutL C terminal dimerisation domain BRN52_10550 SM01340 BRN52_10550 BRN52_10575 SM00822 BRN52_10575 BRN52_10590 SM00052 Putative diguanylate phosphodiesterase BRN52_10590 SM00267 diguanylate cyclase BRN52_10600 SM01322 BRN52_10600 BRN52_10610 SM00357 Cold shock protein domain BRN52_10635 SM00382 ATPases associated with a variety of cellular activities BRN52_10635 SM00487 DEAD-like helicases superfamily BRN52_10635 SM00490 helicase superfamily c-terminal domain BRN52_10640 SM00382 ATPases associated with a variety of cellular activities BRN52_10685 SM00052 Putative diguanylate phosphodiesterase BRN52_10685 SM00267 diguanylate cyclase BRN52_10685 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRN52_10695 SM00841 Elongation factor P, C-terminal BRN52_10695 SM01185 BRN52_10695 BRN52_10800 SM01234 BRN52_10800 BRN52_10810 SM00245 tail specific protease BRN52_10825 SM00840 BRN52_10825 BRN52_10865 SM00859 Semialdehyde dehydrogenase, NAD binding domain BRN52_10885 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BRN52_10895 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BRN52_10930 SM00382 ATPases associated with a variety of cellular activities BRN52_10935 SM00382 ATPases associated with a variety of cellular activities BRN52_10945 SM01126 BRN52_10945 BRN52_11080 SM00073 Histidine Phosphotransfer domain BRN52_11080 SM00260 Two component signalling adaptor domain BRN52_11080 SM00387 Histidine kinase-like ATPases BRN52_11080 SM01231 BRN52_11080 BRN52_11090 SM00448 cheY-homologous receiver domain BRN52_11105 SM00382 ATPases associated with a variety of cellular activities BRN52_11105 SM00962 SRP54-type protein, GTPase domain BRN52_11120 SM00052 Putative diguanylate phosphodiesterase BRN52_11120 SM00267 diguanylate cyclase BRN52_11125 SM00267 diguanylate cyclase BRN52_11130 SM00267 diguanylate cyclase BRN52_11185 SM00382 ATPases associated with a variety of cellular activities BRN52_11245 SM00822 BRN52_11245 BRN52_11250 SM00822 BRN52_11250 BRN52_11270 SM00382 ATPases associated with a variety of cellular activities BRN52_11275 SM00448 cheY-homologous receiver domain BRN52_11285 SM00421 helix_turn_helix, Lux Regulon BRN52_11285 SM00448 cheY-homologous receiver domain BRN52_11325 SM00047 Lysozyme subfamily 2 BRN52_11375 SM00260 Two component signalling adaptor domain BRN52_11375 SM00448 cheY-homologous receiver domain BRN52_11380 SM00858 BRN52_11380 BRN52_11395 SM00387 Histidine kinase-like ATPases BRN52_11400 SM00052 Putative diguanylate phosphodiesterase BRN52_11400 SM00267 diguanylate cyclase BRN52_11400 SM00448 cheY-homologous receiver domain BRN52_11405 SM00091 PAS domain BRN52_11405 SM00387 Histidine kinase-like ATPases BRN52_11410 SM00052 Putative diguanylate phosphodiesterase BRN52_11410 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BRN52_11410 SM00091 PAS domain BRN52_11410 SM00267 diguanylate cyclase BRN52_11425 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRN52_11450 SM00382 ATPases associated with a variety of cellular activities BRN52_11450 SM01086 C-terminal, D2-small domain, of ClpB protein BRN52_11455 SM00316 Ribosomal protein S1-like RNA-binding domain BRN52_11480 SM00382 ATPases associated with a variety of cellular activities BRN52_11480 SM00843 BRN52_11480 BRN52_11505 SM00382 ATPases associated with a variety of cellular activities BRN52_11545 SM00562 BRN52_11545 BRN52_11555 SM00028 Tetratricopeptide repeats BRN52_11570 SM00564 beta-propeller repeat BRN52_11575 SM00382 ATPases associated with a variety of cellular activities BRN52_11580 SM00852 Probable molybdopterin binding domain BRN52_11650 SM01126 BRN52_11650 BRN52_11660 SM00450 Rhodanese Homology Domain BRN52_11710 SM01007 Class II Aldolase and Adducin N-terminal domain BRN52_11795 SM00382 ATPases associated with a variety of cellular activities BRN52_11825 SM00363 S4 RNA-binding domain BRN52_11850 SM00354 helix_turn _helix lactose operon repressor BRN52_11930 SM00316 Ribosomal protein S1-like RNA-binding domain BRN52_11935 SM00411 bacterial (prokaryotic) histone like domain BRN52_11955 SM00822 BRN52_11955 BRN52_11985 SM00116 Domain in cystathionine beta-synthase and other proteins. BRN52_11985 SM01240 BRN52_11985 BRN52_12050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRN52_12065 SM00529 Helix-turn-helix diphteria tox regulatory element BRN52_12075 SM00479 BRN52_12075 BRN52_12145 SM00316 Ribosomal protein S1-like RNA-binding domain BRN52_12145 SM00732 Likely ribonuclease with RNase H fold. BRN52_12160 SM00448 cheY-homologous receiver domain BRN52_12165 SM00387 Histidine kinase-like ATPases BRN52_12175 SM00014 Acid phosphatase homologues BRN52_12505 SM01126 BRN52_12505 BRN52_12555 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BRN52_12555 SM00465 GIY-YIG type nucleases (URI domain) BRN52_12565 SM00226 Low molecular weight phosphatase family BRN52_12580 SM00382 ATPases associated with a variety of cellular activities BRN52_12595 SM00849 Metallo-beta-lactamase superfamily BRN52_12600 SM01126 BRN52_12600 BRN52_12615 SM00382 ATPases associated with a variety of cellular activities BRN52_12675 SM00382 ATPases associated with a variety of cellular activities BRN52_12730 SM00448 cheY-homologous receiver domain BRN52_12735 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRN52_12735 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BRN52_12735 SM00091 PAS domain BRN52_12735 SM00387 Histidine kinase-like ATPases BRN52_12735 SM00388 His Kinase A (phosphoacceptor) domain BRN52_12735 SM00448 cheY-homologous receiver domain BRN52_12755 SM00450 Rhodanese Homology Domain BRN52_12775 SM00226 Low molecular weight phosphatase family BRN52_12780 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BRN52_12820 SM00382 ATPases associated with a variety of cellular activities BRN52_12870 SM00267 diguanylate cyclase BRN52_12910 SM00382 ATPases associated with a variety of cellular activities BRN52_12960 SM00347 helix_turn_helix multiple antibiotic resistance protein BRN52_12990 SM00631 BRN52_12990 BRN52_12995 SM01217 BRN52_12995 BRN52_13010 SM00052 Putative diguanylate phosphodiesterase BRN52_13010 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRN52_13010 SM00267 diguanylate cyclase BRN52_13095 SM00646 BRN52_13095 BRN52_13115 SM00869 Autotransporter beta-domain BRN52_13140 SM00387 Histidine kinase-like ATPases BRN52_13140 SM00388 His Kinase A (phosphoacceptor) domain BRN52_13145 SM00421 helix_turn_helix, Lux Regulon BRN52_13145 SM00448 cheY-homologous receiver domain BRN52_13150 SM00869 Autotransporter beta-domain BRN52_13185 SM00830 Chorismate mutase type II BRN52_13210 SM00240 Forkhead associated domain BRN52_13230 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRN52_13230 SM00866 BRN52_13230 BRN52_13275 SM00434 DNA Topoisomerase IV BRN52_13300 SM00292 breast cancer carboxy-terminal domain BRN52_13300 SM00532 Ligase N family BRN52_13310 SM00771 ZipA, C-terminal domain (FtsZ-binding) BRN52_13315 SM00968 SMC proteins Flexible Hinge Domain BRN52_13370 SM00947 Carbonic anhydrase BRN52_13400 SM00479 BRN52_13400 BRN52_13435 SM00981 BRN52_13435 BRN52_13465 SM00644 BRN52_13465 BRN52_13475 SM00450 Rhodanese Homology Domain BRN52_13500 SM00478 endonuclease III BRN52_13510 SM00947 Carbonic anhydrase BRN52_13550 SM00382 ATPases associated with a variety of cellular activities BRN52_13565 SM00479 BRN52_13565 BRN52_13625 SM01323 BRN52_13625 BRN52_13640 SM00344 helix_turn_helix ASNC type BRN52_13845 SM00387 Histidine kinase-like ATPases BRN52_14045 SM01126 BRN52_14045 BRN52_14075 SM00967 RNA 2'-O ribose methyltransferase substrate binding BRN52_14090 SM00316 Ribosomal protein S1-like RNA-binding domain BRN52_14090 SM00357 Cold shock protein domain BRN52_14090 SM00955 BRN52_14090 BRN52_14125 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BRN52_14135 SM01018 B12 binding domain BRN52_14155 SM00354 helix_turn _helix lactose operon repressor BRN52_14175 SM00984 UDP binding domain BRN52_14195 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRN52_14200 SM00382 ATPases associated with a variety of cellular activities BRN52_14285 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRN52_14295 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BRN52_14305 SM00861 Transketolase, pyrimidine binding domain BRN52_14330 SM00382 ATPases associated with a variety of cellular activities BRN52_14380 SM00271 DnaJ molecular chaperone homology domain BRN52_14450 SM00507 HNH nucleases BRN52_14455 SM00861 Transketolase, pyrimidine binding domain BRN52_14475 SM01126 BRN52_14475 BRN52_14515 SM00347 helix_turn_helix multiple antibiotic resistance protein BRN52_14520 SM00342 helix_turn_helix, arabinose operon control protein BRN52_14525 SM00434 DNA Topoisomerase IV BRN52_14565 SM00710 Parallel beta-helix repeats BRN52_14565 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses BRN52_14570 SM01172 BRN52_14570 BRN52_14600 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRN52_14610 SM00972 Spore Coat Protein U domain BRN52_14625 SM00972 Spore Coat Protein U domain BRN52_14680 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRN52_14715 SM00481 DNA polymerase alpha chain like domain BRN52_14735 SM00382 ATPases associated with a variety of cellular activities BRN52_15135 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BRN52_15140 SM00869 Autotransporter beta-domain BRN52_15160 SM00267 diguanylate cyclase BRN52_15190 SM00487 DEAD-like helicases superfamily BRN52_15190 SM00490 helicase superfamily c-terminal domain BRN52_15210 SM00357 Cold shock protein domain BRN52_15270 SM01118 BRN52_15270 BRN52_15280 SM00448 cheY-homologous receiver domain BRN52_15295 SM00358 Double-stranded RNA binding motif BRN52_15295 SM00535 Ribonuclease III family BRN52_15310 SM00838 Elongation factor G C-terminus BRN52_15315 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRN52_15365 SM00530 Helix-turn-helix XRE-family like proteins BRN52_15390 SM00812 Alpha-L-fucosidase BRN52_15415 SM00387 Histidine kinase-like ATPases BRN52_15415 SM00388 His Kinase A (phosphoacceptor) domain BRN52_15415 SM00448 cheY-homologous receiver domain BRN52_15420 SM00387 Histidine kinase-like ATPases BRN52_15420 SM00388 His Kinase A (phosphoacceptor) domain BRN52_15420 SM00448 cheY-homologous receiver domain BRN52_15425 SM00387 Histidine kinase-like ATPases BRN52_15425 SM00388 His Kinase A (phosphoacceptor) domain BRN52_15425 SM00448 cheY-homologous receiver domain BRN52_15430 SM00867 YceI-like domain BRN52_15440 SM00867 YceI-like domain BRN52_15600 SM00244 prohibitin homologues BRN52_15650 SM00812 Alpha-L-fucosidase BRN52_15655 SM00636 BRN52_15655 BRN52_15675 SM00758 BRN52_15675 BRN52_15675 SM01217 BRN52_15675 BRN52_15680 SM00382 ATPases associated with a variety of cellular activities BRN52_15735 SM01149 BRN52_15735 BRN52_15785 SM00369 Leucine-rich repeats, typical (most populated) subfamily BRN52_15850 SM00073 Histidine Phosphotransfer domain BRN52_15850 SM00260 Two component signalling adaptor domain BRN52_15850 SM00387 Histidine kinase-like ATPases BRN52_15850 SM00448 cheY-homologous receiver domain BRN52_15850 SM01231 BRN52_15850 BRN52_15855 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRN52_15860 SM00260 Two component signalling adaptor domain BRN52_15865 SM00448 cheY-homologous receiver domain BRN52_15870 SM00448 cheY-homologous receiver domain BRN52_15895 SM00491 BRN52_15895 BRN52_15920 SM00954 Region found in RelA / SpoT proteins BRN52_15970 SM00382 ATPases associated with a variety of cellular activities BRN52_15970 SM00487 DEAD-like helicases superfamily BRN52_15970 SM00490 helicase superfamily c-terminal domain BRN52_15970 SM00847 Helicase associated domain (HA2) Add an annotation BRN52_15985 SM00341 Helicase and RNase D C-terminal BRN52_15985 SM00487 DEAD-like helicases superfamily BRN52_15985 SM00490 helicase superfamily c-terminal domain BRN52_15985 SM00956 BRN52_15985 BRN52_15995 SM00448 cheY-homologous receiver domain BRN52_16075 SM00382 ATPases associated with a variety of cellular activities BRN52_16085 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BRN52_16120 SM00834 Putative regulatory protein BRN52_16150 SM00382 ATPases associated with a variety of cellular activities BRN52_16185 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BRN52_16185 SM00534 ATPase domain of DNA mismatch repair MUTS family BRN52_16320 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRN52_16365 SM00904 Riboflavin kinase BRN52_16530 SM00881 CoA binding domain BRN52_16540 SM00387 Histidine kinase-like ATPases BRN52_16540 SM00388 His Kinase A (phosphoacceptor) domain BRN52_16545 SM00382 ATPases associated with a variety of cellular activities BRN52_16545 SM00448 cheY-homologous receiver domain BRN52_16655 SM00382 ATPases associated with a variety of cellular activities BRN52_16685 SM00448 cheY-homologous receiver domain BRN52_16685 SM00862 Transcriptional regulatory protein, C terminal BRN52_16690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRN52_16690 SM00387 Histidine kinase-like ATPases BRN52_16690 SM00388 His Kinase A (phosphoacceptor) domain BRN52_16730 SM00363 S4 RNA-binding domain BRN52_16735 SM00052 Putative diguanylate phosphodiesterase BRN52_16735 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BRN52_16735 SM00091 PAS domain BRN52_16735 SM00267 diguanylate cyclase BRN52_16740 SM00487 DEAD-like helicases superfamily BRN52_16740 SM00490 helicase superfamily c-terminal domain BRN52_16805 SM00829 Enoylreductase BRN52_16920 SM00357 Cold shock protein domain BRN52_16995 SM00645 Papain family cysteine protease BRN52_17025 SM00645 Papain family cysteine protease BRN52_17050 SM00645 Papain family cysteine protease BRN52_17065 SM00387 Histidine kinase-like ATPases BRN52_17065 SM00388 His Kinase A (phosphoacceptor) domain BRN52_17085 SM00487 DEAD-like helicases superfamily BRN52_17085 SM00490 helicase superfamily c-terminal domain BRN52_17085 SM00982 BRN52_17085 BRN52_17085 SM01058 CarD-like/TRCF domain BRN52_17095 SM00073 Histidine Phosphotransfer domain BRN52_17095 SM00260 Two component signalling adaptor domain BRN52_17095 SM00387 Histidine kinase-like ATPases BRN52_17095 SM01231 BRN52_17095 BRN52_17105 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRN52_17105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRN52_17110 SM00260 Two component signalling adaptor domain BRN52_17115 SM00052 Putative diguanylate phosphodiesterase BRN52_17115 SM00448 cheY-homologous receiver domain BRN52_17120 SM00138 Methyltransferase, chemotaxis proteins BRN52_17125 SM00448 cheY-homologous receiver domain BRN52_17150 SM00855 Phosphoglycerate mutase family BRN52_17330 SM01126 BRN52_17330 BRN52_17345 SM00267 diguanylate cyclase BRN52_17425 SM00732 Likely ribonuclease with RNase H fold. BRN52_17460 SM00382 ATPases associated with a variety of cellular activities BRN52_17485 SM00411 bacterial (prokaryotic) histone like domain BRN52_17525 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain BRN52_17540 SM00382 ATPases associated with a variety of cellular activities BRN52_17580 SM01126 BRN52_17580 BRN52_17620 SM01230 BRN52_17620 BRN52_17670 SM00342 helix_turn_helix, arabinose operon control protein BRN52_17675 SM00862 Transcriptional regulatory protein, C terminal BRN52_17715 SM00382 ATPases associated with a variety of cellular activities BRN52_17815 SM00855 Phosphoglycerate mutase family BRN52_17900 SM00382 ATPases associated with a variety of cellular activities BRN52_17900 SM01086 C-terminal, D2-small domain, of ClpB protein BRN52_17945 SM00363 S4 RNA-binding domain BRN52_18000 SM00382 ATPases associated with a variety of cellular activities BRN52_18000 SM00962 SRP54-type protein, GTPase domain BRN52_18000 SM00963 SRP54-type protein, helical bundle domain BRN52_18025 SM00813 Alpha-L-arabinofuranosidase C-terminus BRN52_18045 SM01126 BRN52_18045 BRN52_18160 SM00116 Domain in cystathionine beta-synthase and other proteins. BRN52_18180 SM00382 ATPases associated with a variety of cellular activities BRN52_18230 SM00924 MgtE intracellular N domain BRN52_18280 SM00421 helix_turn_helix, Lux Regulon BRN52_18305 SM00849 Metallo-beta-lactamase superfamily BRN52_18315 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BRN52_18340 SM00422 helix_turn_helix, mercury resistance BRN52_18620 SM00448 cheY-homologous receiver domain BRN52_18620 SM00862 Transcriptional regulatory protein, C terminal BRN52_18625 SM00387 Histidine kinase-like ATPases BRN52_18625 SM00388 His Kinase A (phosphoacceptor) domain BRN52_18630 SM01126 BRN52_18630 BRN52_18645 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BRN52_18690 SM00849 Metallo-beta-lactamase superfamily BRN52_18705 SM00382 ATPases associated with a variety of cellular activities BRN52_18725 SM00387 Histidine kinase-like ATPases BRN52_18725 SM00388 His Kinase A (phosphoacceptor) domain BRN52_18730 SM00448 cheY-homologous receiver domain BRN52_18730 SM00862 Transcriptional regulatory protein, C terminal BRN52_18790 SM00861 Transketolase, pyrimidine binding domain BRN52_18815 SM00028 Tetratricopeptide repeats BRN52_18815 SM00327 von Willebrand factor (vWF) type A domain BRN52_18820 SM00327 von Willebrand factor (vWF) type A domain BRN52_18835 SM00382 ATPases associated with a variety of cellular activities BRN52_18860 SM00965 Secretin and TonB N terminus short domain BRN52_18915 SM00487 DEAD-like helicases superfamily BRN52_18915 SM00490 helicase superfamily c-terminal domain BRN52_18925 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRN52_18925 SM00954 Region found in RelA / SpoT proteins BRN52_18930 SM01409 BRN52_18930 BRN52_18945 SM00072 Guanylate kinase homologues. BRN52_18970 SM00729 Elongator protein 3, MiaB family, Radical SAM BRN52_19000 SM01011 Aminopeptidase P, N-terminal domain BRN52_19090 SM00919 Malic enzyme, NAD binding domain BRN52_19090 SM01274 BRN52_19090 BRN52_19110 SM00387 Histidine kinase-like ATPases BRN52_19110 SM00388 His Kinase A (phosphoacceptor) domain BRN52_19110 SM00448 cheY-homologous receiver domain BRN52_19150 SM00421 helix_turn_helix, Lux Regulon BRN52_19150 SM00448 cheY-homologous receiver domain BRN52_19160 SM00387 Histidine kinase-like ATPases BRN52_19160 SM00388 His Kinase A (phosphoacceptor) domain BRN52_19165 SM00448 cheY-homologous receiver domain BRN52_19165 SM00862 Transcriptional regulatory protein, C terminal BRN52_19185 SM00822 BRN52_19185 BRN52_19190 SM00354 helix_turn _helix lactose operon repressor BRN52_19210 SM00642 Alpha-amylase domain BRN52_19220 SM01154 BRN52_19220 BRN52_19255 SM00450 Rhodanese Homology Domain BRN52_19325 SM00382 ATPases associated with a variety of cellular activities BRN52_19335 SM00460 Transglutaminase/protease-like homologues BRN52_19350 SM00493 BRN52_19350 BRN52_19360 SM00382 ATPases associated with a variety of cellular activities BRN52_19395 SM00729 Elongator protein 3, MiaB family, Radical SAM BRN52_19400 SM00849 Metallo-beta-lactamase superfamily BRN52_19425 SM01126 BRN52_19425 BRN52_19510 SM00331 Sigma factor PP2C-like phosphatases BRN52_19510 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BRN52_19520 SM00479 BRN52_19520 BRN52_19535 SM00849 Metallo-beta-lactamase superfamily BRN52_19540 SM00257 Lysin motif BRN52_19565 SM00411 bacterial (prokaryotic) histone like domain BRN52_19570 SM00382 ATPases associated with a variety of cellular activities BRN52_19570 SM00464 Found in ATP-dependent protease La (LON) BRN52_19575 SM00382 ATPases associated with a variety of cellular activities BRN52_19575 SM00994 ClpX C4-type zinc finger BRN52_19575 SM01086 C-terminal, D2-small domain, of ClpB protein BRN52_19640 SM01329 BRN52_19640 BRN52_19645 SM01126 BRN52_19645 BRN52_19670 SM00448 cheY-homologous receiver domain BRN52_19670 SM00862 Transcriptional regulatory protein, C terminal BRN52_19675 SM00387 Histidine kinase-like ATPases BRN52_19675 SM00388 His Kinase A (phosphoacceptor) domain BRN52_19695 SM00014 Acid phosphatase homologues BRN52_19750 SM00855 Phosphoglycerate mutase family BRN52_19775 SM00829 Enoylreductase BRN52_19785 SM00382 ATPases associated with a variety of cellular activities BRN52_19835 SM00829 Enoylreductase BRN52_19885 SM01126 BRN52_19885 BRN52_19940 SM00838 Elongation factor G C-terminus BRN52_20105 SM00464 Found in ATP-dependent protease La (LON) BRN52_20145 SM01126 BRN52_20145 BRN52_20185 SM00342 helix_turn_helix, arabinose operon control protein BRN52_20225 SM00917 LeuA allosteric (dimerisation) domain BRN52_20230 SM01329 BRN52_20230 BRN52_20260 SM01126 BRN52_20260 BRN52_20345 SM00788 Adenylosuccinate synthetase BRN52_20355 SM00244 prohibitin homologues BRN52_20360 SM00244 prohibitin homologues BRN52_20365 SM00448 cheY-homologous receiver domain BRN52_20370 SM00271 DnaJ molecular chaperone homology domain BRN52_20465 SM00382 ATPases associated with a variety of cellular activities BRN52_20500 SM00825 Beta-ketoacyl synthase BRN52_20510 SM00822 BRN52_20510 BRN52_20515 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BRN52_20550 SM01126 BRN52_20550 BRN52_20555 SM00487 DEAD-like helicases superfamily BRN52_20640 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRN52_20640 SM00866 BRN52_20640 BRN52_20710 SM00382 ATPases associated with a variety of cellular activities BRN52_20730 SM01211 BRN52_20730 BRN52_20830 SM00656 BRN52_20830 BRN52_20905 SM00528 Domain in histone-like proteins of HNS family BRN52_20920 SM00382 ATPases associated with a variety of cellular activities BRN52_20955 SM00882 Coenzyme A transferase BRN52_20960 SM00882 Coenzyme A transferase BRN52_20995 SM00893 Electron transfer flavoprotein domain BRN52_21000 SM00893 Electron transfer flavoprotein domain BRN52_21010 SM00382 ATPases associated with a variety of cellular activities BRN52_21075 SM00116 Domain in cystathionine beta-synthase and other proteins. BRN52_21115 SM00487 DEAD-like helicases superfamily BRN52_21115 SM00490 helicase superfamily c-terminal domain BRN52_21140 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRN52_21170 SM00825 Beta-ketoacyl synthase BRN52_21255 SM01126 BRN52_21255 BRN52_21285 SM00830 Chorismate mutase type II BRN52_21295 SM00382 ATPases associated with a variety of cellular activities BRN52_21365 SM00986 Uracil DNA glycosylase superfamily BRN52_21365 SM00987 UreE urease accessory protein, C-terminal domain BRN52_21390 SM00382 ATPases associated with a variety of cellular activities BRN52_21390 SM00930 BRN52_21390 BRN52_21475 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BRN52_21475 SM00091 PAS domain BRN52_21475 SM00387 Histidine kinase-like ATPases BRN52_21475 SM00388 His Kinase A (phosphoacceptor) domain BRN52_21475 SM00448 cheY-homologous receiver domain BRN52_21495 SM01005 Alanine racemase, C-terminal domain BRN52_21505 SM00344 helix_turn_helix ASNC type BRN52_21550 SM00448 cheY-homologous receiver domain BRN52_21550 SM00862 Transcriptional regulatory protein, C terminal BRN52_21555 SM00387 Histidine kinase-like ATPases BRN52_21555 SM00388 His Kinase A (phosphoacceptor) domain BRN52_21590 SM00382 ATPases associated with a variety of cellular activities BRN52_21610 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. BRN52_21620 SM00986 Uracil DNA glycosylase superfamily BRN52_21620 SM00987 UreE urease accessory protein, C-terminal domain BRN52_21695 SM00387 Histidine kinase-like ATPases BRN52_21745 SM00138 Methyltransferase, chemotaxis proteins BRN52_21750 SM00448 cheY-homologous receiver domain BRN52_21760 SM00382 ATPases associated with a variety of cellular activities BRN52_21760 SM00448 cheY-homologous receiver domain BRN52_21965 SM00100 Cyclic nucleotide-monophosphate binding domain BRN52_21965 SM00419 helix_turn_helix, cAMP Regulatory protein BRN52_21985 SM00903 Flavin reductase like domain BRN52_22255 SM00257 Lysin motif BRN52_22280 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BRN52_22280 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BRN52_22280 SM00493 BRN52_22280 BRN52_22340 SM00487 DEAD-like helicases superfamily BRN52_22340 SM00490 helicase superfamily c-terminal domain BRN52_22365 SM01126 BRN52_22365 BRN52_22405 SM00878 Biotin carboxylase C-terminal domain BRN52_22450 SM00530 Helix-turn-helix XRE-family like proteins BRN52_22475 SM01126 BRN52_22475 BRN52_22510 SM00912 haemagglutination activity domain BRN52_22565 SM00798 AICARFT/IMPCHase bienzyme BRN52_22565 SM00851 MGS-like domain BRN52_22580 SM01209 BRN52_22580 BRN52_22580 SM01210 BRN52_22580 BRN52_22610 SM00563 Phosphate acyltransferases BRN52_22670 SM00052 Putative diguanylate phosphodiesterase BRN52_22670 SM00267 diguanylate cyclase BRN52_22670 SM00448 cheY-homologous receiver domain BRN52_22675 SM00073 Histidine Phosphotransfer domain BRN52_22675 SM00387 Histidine kinase-like ATPases BRN52_22675 SM00388 His Kinase A (phosphoacceptor) domain BRN52_22675 SM00448 cheY-homologous receiver domain BRN52_22755 SM00470 ParB-like nuclease domain BRN52_22775 SM01259 BRN52_22775 BRN52_22805 SM00836 DALR anticodon binding domain BRN52_22805 SM01016 Arginyl tRNA synthetase N terminal dom BRN52_22830 SM00090 RIO-like kinase BRN52_22855 SM00998 Adenylosuccinate lyase C-terminus BRN52_22935 SM00881 CoA binding domain BRN52_22945 SM00116 Domain in cystathionine beta-synthase and other proteins. BRN52_22945 SM00924 MgtE intracellular N domain BRN52_22975 SM00226 Low molecular weight phosphatase family BRN52_22980 SM00248 ankyrin repeats BRN52_22990 SM00825 Beta-ketoacyl synthase BRN52_23015 SM00822 BRN52_23015 BRN52_23035 SM00729 Elongator protein 3, MiaB family, Radical SAM BRN52_23035 SM00876 Biotin and Thiamin Synthesis associated domain BRN52_23085 SM01060 BRN52_23085 BRN52_23130 SM00849 Metallo-beta-lactamase superfamily BRN52_23225 SM00387 Histidine kinase-like ATPases BRN52_23225 SM00388 His Kinase A (phosphoacceptor) domain BRN52_23230 SM00448 cheY-homologous receiver domain BRN52_23230 SM00862 Transcriptional regulatory protein, C terminal BRN52_23260 SM00248 ankyrin repeats BRN52_23265 SM01060 BRN52_23265 BRN52_23295 SM00491 BRN52_23295 BRN52_23325 SM00477 DNA/RNA non-specific endonuclease BRN52_23325 SM00892 DNA/RNA non-specific endonuclease BRN52_23345 SM01004 Delta-aminolevulinic acid dehydratase BRN52_23395 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BRN52_23415 SM00382 ATPases associated with a variety of cellular activities BRN52_23425 SM00530 Helix-turn-helix XRE-family like proteins BRN52_23450 SM00382 ATPases associated with a variety of cellular activities BRN52_23600 SM00563 Phosphate acyltransferases BRN52_23630 SM01126 BRN52_23630 BRN52_23655 SM00346 helix_turn_helix isocitrate lyase regulation BRN52_23670 SM00091 PAS domain BRN52_23670 SM00387 Histidine kinase-like ATPases BRN52_23670 SM00388 His Kinase A (phosphoacceptor) domain BRN52_23670 SM00448 cheY-homologous receiver domain BRN52_23705 SM00564 beta-propeller repeat BRN52_23805 SM01126 BRN52_23805 BRN52_23820 SM00382 ATPases associated with a variety of cellular activities BRN52_23860 SM01126 BRN52_23860 BRN52_23870 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BRN52_23870 SM01232 BRN52_23870 BRN52_23920 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRN52_23920 SM00091 PAS domain BRN52_23990 SM00829 Enoylreductase BRN52_24050 SM00344 helix_turn_helix ASNC type BRN52_24100 SM00829 Enoylreductase BRN52_24130 SM00487 DEAD-like helicases superfamily BRN52_24130 SM00490 helicase superfamily c-terminal domain BRN52_24130 SM00847 Helicase associated domain (HA2) Add an annotation BRN52_24140 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BRN52_24200 SM00421 helix_turn_helix, Lux Regulon BRN52_24200 SM00448 cheY-homologous receiver domain BRN52_24320 SM00155 Phospholipase D. Active site motifs. BRN52_24350 SM01126 BRN52_24350 BRN52_24390 SM00729 Elongator protein 3, MiaB family, Radical SAM BRN52_24425 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRN52_24425 SM00245 tail specific protease BRN52_24640 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BRN52_24670 SM00014 Acid phosphatase homologues BRN52_24680 SM00028 Tetratricopeptide repeats