ATY43_00005 SM00382 ATPases associated with a variety of cellular activities ATY43_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain ATY43_00010 SM00480 DNA polymerase III beta subunit ATY43_00020 SM00387 Histidine kinase-like ATPases ATY43_00020 SM00433 TopoisomeraseII ATY43_00035 SM00028 Tetratricopeptide repeats ATY43_00070 SM00155 Phospholipase D. Active site motifs. ATY43_00195 SM01126 ATY43_00195 ATY43_00280 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY43_00305 SM00369 Leucine-rich repeats, typical (most populated) subfamily ATY43_00415 SM00382 ATPases associated with a variety of cellular activities ATY43_00510 SM00267 diguanylate cyclase ATY43_00520 SM00642 Alpha-amylase domain ATY43_00525 SM00642 Alpha-amylase domain ATY43_00535 SM00642 Alpha-amylase domain ATY43_00545 SM00642 Alpha-amylase domain ATY43_00580 SM01126 ATY43_00580 ATY43_00625 SM00487 DEAD-like helicases superfamily ATY43_00625 SM00490 helicase superfamily c-terminal domain ATY43_00650 SM01126 ATY43_00650 ATY43_00710 SM00382 ATPases associated with a variety of cellular activities ATY43_00730 SM01126 ATY43_00730 ATY43_00755 SM00487 DEAD-like helicases superfamily ATY43_00755 SM00490 helicase superfamily c-terminal domain ATY43_00830 SM01126 ATY43_00830 ATY43_00865 SM00354 helix_turn _helix lactose operon repressor ATY43_00885 SM00642 Alpha-amylase domain ATY43_00890 SM00642 Alpha-amylase domain ATY43_00895 SM00642 Alpha-amylase domain ATY43_00910 SM01126 ATY43_00910 ATY43_00940 SM00382 ATPases associated with a variety of cellular activities ATY43_00950 SM00938 Nitrogen regulatory protein P-II ATY43_00965 SM01126 ATY43_00965 ATY43_01020 SM01228 ATY43_01020 ATY43_01085 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY43_01085 SM00388 His Kinase A (phosphoacceptor) domain ATY43_01120 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family ATY43_01140 SM00354 helix_turn _helix lactose operon repressor ATY43_01150 SM00563 Phosphate acyltransferases ATY43_01155 SM00829 Enoylreductase ATY43_01235 SM00382 ATPases associated with a variety of cellular activities ATY43_01250 SM00382 ATPases associated with a variety of cellular activities ATY43_01280 SM00530 Helix-turn-helix XRE-family like proteins ATY43_01305 SM00855 Phosphoglycerate mutase family ATY43_01310 SM00867 YceI-like domain ATY43_01315 SM00155 Phospholipase D. Active site motifs. ATY43_01325 SM00563 Phosphate acyltransferases ATY43_01340 SM00028 Tetratricopeptide repeats ATY43_01365 SM01230 ATY43_01365 ATY43_01370 SM00938 Nitrogen regulatory protein P-II ATY43_01380 SM00387 Histidine kinase-like ATPases ATY43_01380 SM00388 His Kinase A (phosphoacceptor) domain ATY43_01385 SM00382 ATPases associated with a variety of cellular activities ATY43_01385 SM00448 cheY-homologous receiver domain ATY43_01405 SM01126 ATY43_01405 ATY43_01475 SM00530 Helix-turn-helix XRE-family like proteins ATY43_01525 SM00530 Helix-turn-helix XRE-family like proteins ATY43_01550 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY43_01665 SM00633 Glycosyl hydrolase family 10 ATY43_01670 SM00633 Glycosyl hydrolase family 10 ATY43_01700 SM00758 ATY43_01700 ATY43_01700 SM01217 ATY43_01700 ATY43_01710 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ATY43_01725 SM00354 helix_turn _helix lactose operon repressor ATY43_01810 SM00382 ATPases associated with a variety of cellular activities ATY43_01820 SM00836 DALR anticodon binding domain ATY43_01865 SM00833 Cobalamin synthesis protein cobW C-terminal domain ATY43_01935 SM00878 Biotin carboxylase C-terminal domain ATY43_02020 SM01126 ATY43_02020 ATY43_02110 SM00448 cheY-homologous receiver domain ATY43_02110 SM00862 Transcriptional regulatory protein, C terminal ATY43_02115 SM00387 Histidine kinase-like ATPases ATY43_02120 SM00388 His Kinase A (phosphoacceptor) domain ATY43_02250 SM00563 Phosphate acyltransferases ATY43_02320 SM00357 Cold shock protein domain ATY43_02320 SM00382 ATPases associated with a variety of cellular activities ATY43_02320 SM00959 Rho termination factor, N-terminal domain ATY43_02330 SM00487 DEAD-like helicases superfamily ATY43_02330 SM00490 helicase superfamily c-terminal domain ATY43_02335 SM00382 ATPases associated with a variety of cellular activities ATY43_02345 SM00448 cheY-homologous receiver domain ATY43_02350 SM00986 Uracil DNA glycosylase superfamily ATY43_02350 SM00987 UreE urease accessory protein, C-terminal domain ATY43_02390 SM00883 Chaperonin 10 Kd subunit ATY43_02440 SM01126 ATY43_02440 ATY43_02480 SM00944 Pro-kumamolisin, activation domain ATY43_02510 SM00867 YceI-like domain ATY43_02525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY43_02525 SM00331 Sigma factor PP2C-like phosphatases ATY43_02605 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY43_02640 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ATY43_02640 SM00474 3'-5' exonuclease ATY43_02640 SM00475 5'-3' exonuclease ATY43_02640 SM00482 DNA polymerase A domain ATY43_02700 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY43_02710 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY43_02790 SM00382 ATPases associated with a variety of cellular activities ATY43_02790 SM00448 cheY-homologous receiver domain ATY43_02795 SM00387 Histidine kinase-like ATPases ATY43_02795 SM00388 His Kinase A (phosphoacceptor) domain ATY43_02820 SM00450 Rhodanese Homology Domain ATY43_02835 SM01126 ATY43_02835 ATY43_02845 SM01150 ATY43_02845 ATY43_02910 SM01126 ATY43_02910 ATY43_02925 SM00382 ATPases associated with a variety of cellular activities ATY43_02985 SM00400 zinc finger ATY43_02985 SM00493 ATY43_02985 ATY43_02985 SM00766 DNA primase DnaG DnaB-binding ATY43_03015 SM00645 Papain family cysteine protease ATY43_03080 SM00357 Cold shock protein domain ATY43_03210 SM00829 Enoylreductase ATY43_03275 SM00487 DEAD-like helicases superfamily ATY43_03275 SM00490 helicase superfamily c-terminal domain ATY43_03280 SM00052 Putative diguanylate phosphodiesterase ATY43_03280 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY43_03280 SM00091 PAS domain ATY43_03280 SM00267 diguanylate cyclase ATY43_03285 SM00363 S4 RNA-binding domain ATY43_03320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY43_03320 SM00387 Histidine kinase-like ATPases ATY43_03320 SM00388 His Kinase A (phosphoacceptor) domain ATY43_03325 SM00448 cheY-homologous receiver domain ATY43_03325 SM00862 Transcriptional regulatory protein, C terminal ATY43_03355 SM00382 ATPases associated with a variety of cellular activities ATY43_03455 SM00382 ATPases associated with a variety of cellular activities ATY43_03455 SM00448 cheY-homologous receiver domain ATY43_03460 SM00387 Histidine kinase-like ATPases ATY43_03460 SM00388 His Kinase A (phosphoacceptor) domain ATY43_03470 SM00881 CoA binding domain ATY43_03635 SM00904 Riboflavin kinase ATY43_03680 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY43_03810 SM00533 DNA-binding domain of DNA mismatch repair MUTS family ATY43_03810 SM00534 ATPase domain of DNA mismatch repair MUTS family ATY43_03840 SM00382 ATPases associated with a variety of cellular activities ATY43_03880 SM00834 Putative regulatory protein ATY43_03915 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ATY43_03925 SM00382 ATPases associated with a variety of cellular activities ATY43_04005 SM00448 cheY-homologous receiver domain ATY43_04015 SM00341 Helicase and RNase D C-terminal ATY43_04015 SM00487 DEAD-like helicases superfamily ATY43_04015 SM00490 helicase superfamily c-terminal domain ATY43_04015 SM00956 ATY43_04015 ATY43_04025 SM00382 ATPases associated with a variety of cellular activities ATY43_04025 SM00487 DEAD-like helicases superfamily ATY43_04025 SM00490 helicase superfamily c-terminal domain ATY43_04025 SM00847 Helicase associated domain (HA2) Add an annotation ATY43_04080 SM00954 Region found in RelA / SpoT proteins ATY43_04105 SM00491 ATY43_04105 ATY43_04130 SM00448 cheY-homologous receiver domain ATY43_04135 SM00448 cheY-homologous receiver domain ATY43_04140 SM00260 Two component signalling adaptor domain ATY43_04145 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY43_04150 SM00073 Histidine Phosphotransfer domain ATY43_04150 SM00260 Two component signalling adaptor domain ATY43_04150 SM00387 Histidine kinase-like ATPases ATY43_04150 SM00448 cheY-homologous receiver domain ATY43_04150 SM01231 ATY43_04150 ATY43_04185 SM00327 von Willebrand factor (vWF) type A domain ATY43_04205 SM00369 Leucine-rich repeats, typical (most populated) subfamily ATY43_04250 SM01149 ATY43_04250 ATY43_04295 SM00382 ATPases associated with a variety of cellular activities ATY43_04300 SM00758 ATY43_04300 ATY43_04300 SM01217 ATY43_04300 ATY43_04320 SM00636 ATY43_04320 ATY43_04325 SM00812 Alpha-L-fucosidase ATY43_04375 SM00244 prohibitin homologues ATY43_04455 SM00116 Domain in cystathionine beta-synthase and other proteins. ATY43_04515 SM00867 YceI-like domain ATY43_04525 SM00867 YceI-like domain ATY43_04530 SM00387 Histidine kinase-like ATPases ATY43_04530 SM00388 His Kinase A (phosphoacceptor) domain ATY43_04530 SM00448 cheY-homologous receiver domain ATY43_04535 SM00387 Histidine kinase-like ATPases ATY43_04535 SM00388 His Kinase A (phosphoacceptor) domain ATY43_04535 SM00448 cheY-homologous receiver domain ATY43_04540 SM00387 Histidine kinase-like ATPases ATY43_04540 SM00388 His Kinase A (phosphoacceptor) domain ATY43_04540 SM00448 cheY-homologous receiver domain ATY43_04560 SM00812 Alpha-L-fucosidase ATY43_04590 SM00530 Helix-turn-helix XRE-family like proteins ATY43_04645 SM00838 Elongation factor G C-terminus ATY43_04660 SM00358 Double-stranded RNA binding motif ATY43_04660 SM00535 Ribonuclease III family ATY43_04675 SM00448 cheY-homologous receiver domain ATY43_04685 SM01118 ATY43_04685 ATY43_04740 SM00357 Cold shock protein domain ATY43_04765 SM00487 DEAD-like helicases superfamily ATY43_04765 SM00490 helicase superfamily c-terminal domain ATY43_04795 SM00267 diguanylate cyclase ATY43_04815 SM00869 Autotransporter beta-domain ATY43_04820 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ATY43_05185 SM00382 ATPases associated with a variety of cellular activities ATY43_05205 SM00481 DNA polymerase alpha chain like domain ATY43_05240 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY43_05295 SM00972 Spore Coat Protein U domain ATY43_05310 SM00972 Spore Coat Protein U domain ATY43_05320 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY43_05350 SM01172 ATY43_05350 ATY43_05355 SM00710 Parallel beta-helix repeats ATY43_05355 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses ATY43_05390 SM00434 DNA Topoisomerase IV ATY43_05395 SM00342 helix_turn_helix, arabinose operon control protein ATY43_05400 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY43_05445 SM01126 ATY43_05445 ATY43_05470 SM00861 Transketolase, pyrimidine binding domain ATY43_05475 SM00507 HNH nucleases ATY43_05545 SM00271 DnaJ molecular chaperone homology domain ATY43_05585 SM00382 ATPases associated with a variety of cellular activities ATY43_05610 SM00861 Transketolase, pyrimidine binding domain ATY43_05620 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. ATY43_05630 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY43_05725 SM00382 ATPases associated with a variety of cellular activities ATY43_05730 SM00345 helix_turn_helix gluconate operon transcriptional repressor ATY43_05745 SM00984 UDP binding domain ATY43_05765 SM00354 helix_turn _helix lactose operon repressor ATY43_05785 SM01018 B12 binding domain ATY43_05795 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ATY43_05840 SM00967 RNA 2'-O ribose methyltransferase substrate binding ATY43_05870 SM01126 ATY43_05870 ATY43_05925 SM01126 ATY43_05925 ATY43_06055 SM00387 Histidine kinase-like ATPases ATY43_06250 SM00344 helix_turn_helix ASNC type ATY43_06265 SM01323 ATY43_06265 ATY43_06320 SM00479 ATY43_06320 ATY43_06335 SM00382 ATPases associated with a variety of cellular activities ATY43_06380 SM00947 Carbonic anhydrase ATY43_06390 SM00478 endonuclease III ATY43_06415 SM00450 Rhodanese Homology Domain ATY43_06425 SM00644 ATY43_06425 ATY43_06455 SM00981 ATY43_06455 ATY43_06490 SM00479 ATY43_06490 ATY43_06515 SM00947 Carbonic anhydrase ATY43_06570 SM00968 SMC proteins Flexible Hinge Domain ATY43_06575 SM00771 ZipA, C-terminal domain (FtsZ-binding) ATY43_06585 SM00292 breast cancer carboxy-terminal domain ATY43_06585 SM00532 Ligase N family ATY43_06610 SM00434 DNA Topoisomerase IV ATY43_06660 SM00345 helix_turn_helix gluconate operon transcriptional repressor ATY43_06660 SM00866 ATY43_06660 ATY43_06680 SM00240 Forkhead associated domain ATY43_06700 SM00830 Chorismate mutase type II ATY43_06725 SM00869 Autotransporter beta-domain ATY43_06730 SM00421 helix_turn_helix, Lux Regulon ATY43_06730 SM00448 cheY-homologous receiver domain ATY43_06735 SM00387 Histidine kinase-like ATPases ATY43_06735 SM00388 His Kinase A (phosphoacceptor) domain ATY43_06755 SM00869 Autotransporter beta-domain ATY43_06775 SM00646 ATY43_06775 ATY43_06850 SM00052 Putative diguanylate phosphodiesterase ATY43_06850 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY43_06850 SM00267 diguanylate cyclase ATY43_06865 SM01217 ATY43_06865 ATY43_06870 SM00631 ATY43_06870 ATY43_06900 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY43_06945 SM00382 ATPases associated with a variety of cellular activities ATY43_06995 SM00267 diguanylate cyclase ATY43_07050 SM00382 ATPases associated with a variety of cellular activities ATY43_07070 SM00646 ATY43_07070 ATY43_07195 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ATY43_07200 SM00226 Low molecular weight phosphatase family ATY43_07220 SM00450 Rhodanese Homology Domain ATY43_07240 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY43_07240 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY43_07240 SM00091 PAS domain ATY43_07240 SM00387 Histidine kinase-like ATPases ATY43_07240 SM00388 His Kinase A (phosphoacceptor) domain ATY43_07240 SM00448 cheY-homologous receiver domain ATY43_07245 SM00448 cheY-homologous receiver domain ATY43_07305 SM00382 ATPases associated with a variety of cellular activities ATY43_07360 SM00382 ATPases associated with a variety of cellular activities ATY43_07370 SM01126 ATY43_07370 ATY43_07375 SM00849 Metallo-beta-lactamase superfamily ATY43_07390 SM00382 ATPases associated with a variety of cellular activities ATY43_07405 SM00226 Low molecular weight phosphatase family ATY43_07415 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ATY43_07415 SM00465 GIY-YIG type nucleases (URI domain) ATY43_07460 SM01126 ATY43_07460 ATY43_07580 SM01126 ATY43_07580 ATY43_07780 SM00014 Acid phosphatase homologues ATY43_07790 SM00387 Histidine kinase-like ATPases ATY43_07795 SM00448 cheY-homologous receiver domain ATY43_07810 SM00316 Ribosomal protein S1-like RNA-binding domain ATY43_07810 SM00732 Likely ribonuclease with RNase H fold. ATY43_07880 SM00479 ATY43_07880 ATY43_07890 SM00529 Helix-turn-helix diphteria tox regulatory element ATY43_07900 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY43_07965 SM00116 Domain in cystathionine beta-synthase and other proteins. ATY43_07965 SM01240 ATY43_07965 ATY43_08015 SM00822 ATY43_08015 ATY43_08035 SM00411 bacterial (prokaryotic) histone like domain ATY43_08040 SM00316 Ribosomal protein S1-like RNA-binding domain ATY43_08120 SM00354 helix_turn _helix lactose operon repressor ATY43_08145 SM00363 S4 RNA-binding domain ATY43_08175 SM00382 ATPases associated with a variety of cellular activities ATY43_08255 SM01007 Class II Aldolase and Adducin N-terminal domain ATY43_08300 SM00450 Rhodanese Homology Domain ATY43_08310 SM01126 ATY43_08310 ATY43_08380 SM00852 Probable molybdopterin binding domain ATY43_08385 SM00382 ATPases associated with a variety of cellular activities ATY43_08390 SM00564 beta-propeller repeat ATY43_08405 SM00028 Tetratricopeptide repeats ATY43_08415 SM00562 ATY43_08415 ATY43_08455 SM00382 ATPases associated with a variety of cellular activities ATY43_08475 SM00382 ATPases associated with a variety of cellular activities ATY43_08475 SM00843 ATY43_08475 ATY43_08505 SM00316 Ribosomal protein S1-like RNA-binding domain ATY43_08510 SM00382 ATPases associated with a variety of cellular activities ATY43_08510 SM01086 C-terminal, D2-small domain, of ClpB protein ATY43_08535 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY43_08550 SM00052 Putative diguanylate phosphodiesterase ATY43_08550 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY43_08550 SM00091 PAS domain ATY43_08550 SM00267 diguanylate cyclase ATY43_08555 SM00091 PAS domain ATY43_08555 SM00387 Histidine kinase-like ATPases ATY43_08560 SM00052 Putative diguanylate phosphodiesterase ATY43_08560 SM00267 diguanylate cyclase ATY43_08560 SM00448 cheY-homologous receiver domain ATY43_08565 SM00387 Histidine kinase-like ATPases ATY43_08580 SM00858 ATY43_08580 ATY43_08585 SM00260 Two component signalling adaptor domain ATY43_08585 SM00448 cheY-homologous receiver domain ATY43_08635 SM00047 Lysozyme subfamily 2 ATY43_08675 SM00421 helix_turn_helix, Lux Regulon ATY43_08675 SM00448 cheY-homologous receiver domain ATY43_08685 SM00448 cheY-homologous receiver domain ATY43_08690 SM00382 ATPases associated with a variety of cellular activities ATY43_08710 SM00822 ATY43_08710 ATY43_08715 SM00822 ATY43_08715 ATY43_08770 SM00382 ATPases associated with a variety of cellular activities ATY43_08825 SM00267 diguanylate cyclase ATY43_08830 SM00267 diguanylate cyclase ATY43_08835 SM00052 Putative diguanylate phosphodiesterase ATY43_08835 SM00267 diguanylate cyclase ATY43_08850 SM00382 ATPases associated with a variety of cellular activities ATY43_08850 SM00962 SRP54-type protein, GTPase domain ATY43_08865 SM00448 cheY-homologous receiver domain ATY43_08875 SM00073 Histidine Phosphotransfer domain ATY43_08875 SM00260 Two component signalling adaptor domain ATY43_08875 SM00387 Histidine kinase-like ATPases ATY43_08875 SM01231 ATY43_08875 ATY43_09005 SM01126 ATY43_09005 ATY43_09015 SM00382 ATPases associated with a variety of cellular activities ATY43_09020 SM00382 ATPases associated with a variety of cellular activities ATY43_09055 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ATY43_09065 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase ATY43_09085 SM00859 Semialdehyde dehydrogenase, NAD binding domain ATY43_09125 SM00840 ATY43_09125 ATY43_09140 SM00245 tail specific protease ATY43_09155 SM01234 ATY43_09155 ATY43_09255 SM00841 Elongation factor P, C-terminal ATY43_09255 SM01185 ATY43_09255 ATY43_09265 SM00052 Putative diguanylate phosphodiesterase ATY43_09265 SM00267 diguanylate cyclase ATY43_09265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY43_09310 SM00382 ATPases associated with a variety of cellular activities ATY43_09315 SM00382 ATPases associated with a variety of cellular activities ATY43_09315 SM00487 DEAD-like helicases superfamily ATY43_09315 SM00490 helicase superfamily c-terminal domain ATY43_09340 SM00357 Cold shock protein domain ATY43_09350 SM01322 ATY43_09350 ATY43_09365 SM00052 Putative diguanylate phosphodiesterase ATY43_09365 SM00267 diguanylate cyclase ATY43_09380 SM00822 ATY43_09380 ATY43_09400 SM00853 MutL C terminal dimerisation domain ATY43_09400 SM01340 ATY43_09400 ATY43_09405 SM00646 ATY43_09405 ATY43_09450 SM00474 3'-5' exonuclease ATY43_09465 SM00528 Domain in histone-like proteins of HNS family ATY43_09510 SM01126 ATY43_09510 ATY43_09585 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY43_09610 SM00116 Domain in cystathionine beta-synthase and other proteins. ATY43_09610 SM01091 Transporter associated domain ATY43_09670 SM01230 ATY43_09670 ATY43_09680 SM01230 ATY43_09680 ATY43_09690 SM00267 diguanylate cyclase ATY43_09690 SM00448 cheY-homologous receiver domain ATY43_09745 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY43_09745 SM00091 PAS domain ATY43_09745 SM00387 Histidine kinase-like ATPases ATY43_09745 SM00388 His Kinase A (phosphoacceptor) domain ATY43_09745 SM00448 cheY-homologous receiver domain ATY43_09745 SM01079 ATY43_09745 ATY43_09750 SM00448 cheY-homologous receiver domain ATY43_09750 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY43_09785 SM01126 ATY43_09785 ATY43_09795 SM00354 helix_turn _helix lactose operon repressor ATY43_09990 SM00260 Two component signalling adaptor domain ATY43_10000 SM00448 cheY-homologous receiver domain ATY43_10005 SM00073 Histidine Phosphotransfer domain ATY43_10005 SM00260 Two component signalling adaptor domain ATY43_10005 SM00387 Histidine kinase-like ATPases ATY43_10005 SM01231 ATY43_10005 ATY43_10030 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY43_10050 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY43_10050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY43_10060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY43_10060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY43_10065 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY43_10065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY43_10070 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY43_10070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY43_10075 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY43_10075 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY43_10090 SM00260 Two component signalling adaptor domain ATY43_10110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY43_10110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY43_10115 SM00138 Methyltransferase, chemotaxis proteins ATY43_10125 SM00448 cheY-homologous receiver domain ATY43_10130 SM00052 Putative diguanylate phosphodiesterase ATY43_10130 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY43_10130 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY43_10130 SM00091 PAS domain ATY43_10130 SM00267 diguanylate cyclase ATY43_10155 SM00966 SpoVT / AbrB like domain ATY43_10180 SM00073 Histidine Phosphotransfer domain ATY43_10180 SM00387 Histidine kinase-like ATPases ATY43_10180 SM00388 His Kinase A (phosphoacceptor) domain ATY43_10180 SM00448 cheY-homologous receiver domain ATY43_10190 SM00448 cheY-homologous receiver domain ATY43_10190 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY43_10200 SM00937 ATY43_10200 ATY43_10205 SM00850 LytTr DNA-binding domain ATY43_10255 SM00851 MGS-like domain ATY43_10255 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ATY43_10265 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain ATY43_10315 SM00899 ATY43_10315 ATY43_10335 SM00822 ATY43_10335 ATY43_10340 SM00841 Elongation factor P, C-terminal ATY43_10340 SM01185 ATY43_10340 ATY43_10385 SM00758 ATY43_10385 ATY43_10405 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ATY43_10430 SM01130 ATY43_10430 ATY43_10450 SM00670 Large family of predicted nucleotide-binding domains ATY43_10545 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ATY43_10555 SM00382 ATPases associated with a variety of cellular activities ATY43_10595 SM00382 ATPases associated with a variety of cellular activities ATY43_10605 SM01103 ATY43_10605 ATY43_10615 SM00257 Lysin motif ATY43_10635 SM00463 Small MutS-related domain ATY43_10665 SM01192 ATY43_10665 ATY43_10665 SM01193 ATY43_10665 ATY43_10690 SM00387 Histidine kinase-like ATPases ATY43_10690 SM00433 TopoisomeraseII ATY43_10725 SM01091 Transporter associated domain ATY43_10760 SM00382 ATPases associated with a variety of cellular activities ATY43_10770 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY43_10965 SM00060 Fibronectin type 3 domain ATY43_11005 SM00448 cheY-homologous receiver domain ATY43_11005 SM00862 Transcriptional regulatory protein, C terminal ATY43_11015 SM00387 Histidine kinase-like ATPases ATY43_11045 SM00331 Sigma factor PP2C-like phosphatases ATY43_11045 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ATY43_11070 SM00240 Forkhead associated domain ATY43_11105 SM00382 ATPases associated with a variety of cellular activities ATY43_11105 SM01086 C-terminal, D2-small domain, of ClpB protein ATY43_11255 SM00363 S4 RNA-binding domain ATY43_11260 SM00316 Ribosomal protein S1-like RNA-binding domain ATY43_11280 SM00421 helix_turn_helix, Lux Regulon ATY43_11280 SM00448 cheY-homologous receiver domain ATY43_11285 SM00450 Rhodanese Homology Domain ATY43_11305 SM00984 UDP binding domain ATY43_11345 SM01126 ATY43_11345 ATY43_11355 SM01126 ATY43_11355 ATY43_11365 SM01012 ATY43_11365 ATY43_11405 SM00852 Probable molybdopterin binding domain ATY43_11425 SM01126 ATY43_11425 ATY43_11490 SM00944 Pro-kumamolisin, activation domain ATY43_11555 SM01130 ATY43_11555 ATY43_11580 SM00342 helix_turn_helix, arabinose operon control protein ATY43_11585 SM00382 ATPases associated with a variety of cellular activities ATY43_11585 SM00962 SRP54-type protein, GTPase domain ATY43_11585 SM00963 SRP54-type protein, helical bundle domain ATY43_11600 SM00478 endonuclease III ATY43_11610 SM00448 cheY-homologous receiver domain ATY43_11810 SM00422 helix_turn_helix, mercury resistance ATY43_11815 SM00411 bacterial (prokaryotic) histone like domain ATY43_11820 SM00873 B3/4 domain ATY43_11820 SM00874 tRNA synthetase B5 domain ATY43_11820 SM00896 Ferredoxin-fold anticodon binding domain ATY43_11845 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ATY43_11880 SM00487 DEAD-like helicases superfamily ATY43_11880 SM00490 helicase superfamily c-terminal domain ATY43_11970 SM01001 AIR carboxylase ATY43_11990 SM00316 Ribosomal protein S1-like RNA-binding domain ATY43_11990 SM00322 K homology RNA-binding domain ATY43_11995 SM01387 ATY43_11995 ATY43_12015 SM00316 Ribosomal protein S1-like RNA-binding domain ATY43_12015 SM00322 K homology RNA-binding domain ATY43_12065 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ATY43_12070 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ATY43_12145 SM00052 Putative diguanylate phosphodiesterase ATY43_12145 SM00267 diguanylate cyclase ATY43_12145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY43_12215 SM00859 Semialdehyde dehydrogenase, NAD binding domain ATY43_12250 SM00257 Lysin motif ATY43_12285 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY43_12325 SM01160 ATY43_12325 ATY43_12335 SM01126 ATY43_12335 ATY43_12385 SM00098 Alkaline phosphatase homologues ATY43_12390 SM00977 TilS substrate C-terminal domain ATY43_12445 SM00316 Ribosomal protein S1-like RNA-binding domain ATY43_12560 SM01126 ATY43_12560 ATY43_12615 SM01126 ATY43_12615 ATY43_12630 SM00642 Alpha-amylase domain ATY43_12640 SM01126 ATY43_12640 ATY43_12645 SM01126 ATY43_12645 ATY43_12680 SM00528 Domain in histone-like proteins of HNS family ATY43_12715 SM01126 ATY43_12715 ATY43_12725 SM00869 Autotransporter beta-domain ATY43_12830 SM00967 RNA 2'-O ribose methyltransferase substrate binding ATY43_12850 SM01126 ATY43_12850 ATY43_12915 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY43_12915 SM00387 Histidine kinase-like ATPases ATY43_12970 SM00506 Appr-1"-p processing enzyme ATY43_13030 SM01060 ATY43_13030 ATY43_13055 SM00091 PAS domain ATY43_13055 SM00342 helix_turn_helix, arabinose operon control protein ATY43_13115 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY43_13120 SM00481 DNA polymerase alpha chain like domain ATY43_13140 SM00966 SpoVT / AbrB like domain ATY43_13195 SM00220 Serine/Threonine protein kinases, catalytic domain ATY43_13205 SM00487 DEAD-like helicases superfamily ATY43_13240 SM00487 DEAD-like helicases superfamily ATY43_13240 SM00490 helicase superfamily c-terminal domain ATY43_13305 SM00382 ATPases associated with a variety of cellular activities ATY43_13305 SM01086 C-terminal, D2-small domain, of ClpB protein ATY43_13635 SM00478 endonuclease III ATY43_13650 SM00421 helix_turn_helix, Lux Regulon ATY43_13650 SM00448 cheY-homologous receiver domain ATY43_13695 SM00387 Histidine kinase-like ATPases ATY43_13695 SM00388 His Kinase A (phosphoacceptor) domain ATY43_13700 SM00448 cheY-homologous receiver domain ATY43_13700 SM00862 Transcriptional regulatory protein, C terminal ATY43_13735 SM00382 ATPases associated with a variety of cellular activities ATY43_13765 SM00990 ATY43_13765 ATY43_13820 SM00662 RNA polymerases D ATY43_13825 SM00363 S4 RNA-binding domain ATY43_13825 SM01390 ATY43_13825 ATY43_13885 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ATY43_13890 SM01374 ATY43_13890 ATY43_13910 SM00322 K homology RNA-binding domain ATY43_13925 SM01382 ATY43_13925 ATY43_13925 SM01383 ATY43_13925 ATY43_13945 SM01403 ATY43_13945 ATY43_13960 SM00838 Elongation factor G C-terminus ATY43_13960 SM00889 Elongation factor G, domain IV ATY43_13975 SM00663 RNA polymerase I subunit A N-terminus ATY43_14000 SM00649 Ribosomal protein L11/L12 ATY43_14005 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. ATY43_14005 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ATY43_14055 SM01400 ATY43_14055 ATY43_14075 SM00028 Tetratricopeptide repeats ATY43_14085 SM00937 ATY43_14085 ATY43_14090 SM00028 Tetratricopeptide repeats ATY43_14095 SM00852 Probable molybdopterin binding domain ATY43_14225 SM01002 Alanine dehydrogenase/PNT, C-terminal domain ATY43_14225 SM01003 Alanine dehydrogenase/PNT, N-terminal domain ATY43_14240 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ATY43_14240 SM00475 5'-3' exonuclease ATY43_14310 SM01126 ATY43_14310 ATY43_14345 SM00421 helix_turn_helix, Lux Regulon ATY43_14365 SM00387 Histidine kinase-like ATPases ATY43_14365 SM00448 cheY-homologous receiver domain ATY43_14370 SM00448 cheY-homologous receiver domain ATY43_14480 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY43_14525 SM01126 ATY43_14525 ATY43_14585 SM00650 Ribosomal RNA adenine dimethylases ATY43_14650 SM00387 Histidine kinase-like ATPases ATY43_14650 SM00388 His Kinase A (phosphoacceptor) domain ATY43_14655 SM00448 cheY-homologous receiver domain ATY43_14655 SM00862 Transcriptional regulatory protein, C terminal ATY43_14665 SM00382 ATPases associated with a variety of cellular activities ATY43_14685 SM00382 ATPases associated with a variety of cellular activities ATY43_14825 SM00996 S-adenosyl-L-homocysteine hydrolase ATY43_14825 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ATY43_14885 SM00829 Enoylreductase ATY43_14930 SM00957 SecA DEAD-like domain ATY43_14930 SM00958 SecA preprotein cross-linking domain ATY43_14950 SM00864 Tubulin/FtsZ family, GTPase domain ATY43_14950 SM00865 Tubulin/FtsZ family, C-terminal domain ATY43_14955 SM00842 Cell division protein FtsA ATY43_15060 SM00448 cheY-homologous receiver domain ATY43_15060 SM00862 Transcriptional regulatory protein, C terminal ATY43_15065 SM00387 Histidine kinase-like ATPases ATY43_15065 SM00388 His Kinase A (phosphoacceptor) domain ATY43_15175 SM00382 ATPases associated with a variety of cellular activities ATY43_15205 SM00829 Enoylreductase ATY43_15225 SM00448 cheY-homologous receiver domain ATY43_15225 SM00862 Transcriptional regulatory protein, C terminal ATY43_15230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY43_15230 SM00387 Histidine kinase-like ATPases ATY43_15230 SM00388 His Kinase A (phosphoacceptor) domain ATY43_15380 SM01126 ATY43_15380 ATY43_15405 SM01126 ATY43_15405 ATY43_15445 SM00354 helix_turn _helix lactose operon repressor ATY43_15455 SM00345 helix_turn_helix gluconate operon transcriptional repressor ATY43_15455 SM00866 ATY43_15455 ATY43_15515 SM00387 Histidine kinase-like ATPases ATY43_15515 SM00388 His Kinase A (phosphoacceptor) domain ATY43_15515 SM00448 cheY-homologous receiver domain ATY43_15520 SM00448 cheY-homologous receiver domain ATY43_15525 SM00387 Histidine kinase-like ATPases ATY43_15525 SM00388 His Kinase A (phosphoacceptor) domain ATY43_15530 SM00749 bacterial OsmY and nodulation domain ATY43_15540 SM01350 ATY43_15540 ATY43_15590 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY43_15590 SM00245 tail specific protease ATY43_15595 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY43_15615 SM00936 Penicillin-binding protein 5, C-terminal domain ATY43_15705 SM00268 Actin ATY43_15775 SM00267 diguanylate cyclase ATY43_15780 SM01263 ATY43_15780 ATY43_15795 SM00382 ATPases associated with a variety of cellular activities ATY43_15795 SM01086 C-terminal, D2-small domain, of ClpB protein ATY43_15885 SM00448 cheY-homologous receiver domain ATY43_15885 SM00850 LytTr DNA-binding domain ATY43_15930 SM00267 diguanylate cyclase ATY43_15945 SM00637 ATY43_15945 ATY43_15965 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY43_15965 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY43_15965 SM00091 PAS domain ATY43_15965 SM00267 diguanylate cyclase ATY43_15975 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY43_16045 SM00060 Fibronectin type 3 domain ATY43_16155 SM00046 Diacylglycerol kinase catalytic domain (presumed) ATY43_16170 SM00271 DnaJ molecular chaperone homology domain ATY43_16255 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY43_16290 SM01126 ATY43_16290 ATY43_16405 SM00644 ATY43_16405 ATY43_16415 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ATY43_16435 SM01126 ATY43_16435 ATY43_16500 SM01126 ATY43_16500 ATY43_16510 SM01126 ATY43_16510 ATY43_16530 SM01126 ATY43_16530 ATY43_16540 SM01217 ATY43_16540 ATY43_16545 SM00905 Dihydroneopterin aldolase ATY43_16585 SM00645 Papain family cysteine protease ATY43_16605 SM00645 Papain family cysteine protease ATY43_16625 SM00387 Histidine kinase-like ATPases ATY43_16625 SM00388 His Kinase A (phosphoacceptor) domain ATY43_16645 SM00487 DEAD-like helicases superfamily ATY43_16645 SM00490 helicase superfamily c-terminal domain ATY43_16645 SM00982 ATY43_16645 ATY43_16645 SM01058 CarD-like/TRCF domain ATY43_16655 SM00073 Histidine Phosphotransfer domain ATY43_16655 SM00260 Two component signalling adaptor domain ATY43_16655 SM00387 Histidine kinase-like ATPases ATY43_16655 SM01231 ATY43_16655 ATY43_16660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY43_16660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY43_16665 SM00260 Two component signalling adaptor domain ATY43_16670 SM00052 Putative diguanylate phosphodiesterase ATY43_16670 SM00448 cheY-homologous receiver domain ATY43_16675 SM00138 Methyltransferase, chemotaxis proteins ATY43_16680 SM00448 cheY-homologous receiver domain ATY43_16705 SM00855 Phosphoglycerate mutase family ATY43_16840 SM01126 ATY43_16840 ATY43_16855 SM00829 Enoylreductase ATY43_16860 SM00267 diguanylate cyclase ATY43_16950 SM00732 Likely ribonuclease with RNase H fold. ATY43_16990 SM00382 ATPases associated with a variety of cellular activities ATY43_17010 SM00411 bacterial (prokaryotic) histone like domain ATY43_17050 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain ATY43_17065 SM00382 ATPases associated with a variety of cellular activities ATY43_17105 SM01126 ATY43_17105 ATY43_17170 SM00342 helix_turn_helix, arabinose operon control protein ATY43_17175 SM00862 Transcriptional regulatory protein, C terminal ATY43_17215 SM00382 ATPases associated with a variety of cellular activities ATY43_17315 SM00855 Phosphoglycerate mutase family ATY43_17390 SM00382 ATPases associated with a variety of cellular activities ATY43_17390 SM01086 C-terminal, D2-small domain, of ClpB protein ATY43_17430 SM00363 S4 RNA-binding domain ATY43_17485 SM00382 ATPases associated with a variety of cellular activities ATY43_17485 SM00962 SRP54-type protein, GTPase domain ATY43_17485 SM00963 SRP54-type protein, helical bundle domain ATY43_17490 SM01126 ATY43_17490 ATY43_17505 SM00813 Alpha-L-arabinofuranosidase C-terminus ATY43_17520 SM01126 ATY43_17520 ATY43_17640 SM00116 Domain in cystathionine beta-synthase and other proteins. ATY43_17660 SM00382 ATPases associated with a variety of cellular activities ATY43_17705 SM00924 MgtE intracellular N domain ATY43_17745 SM00421 helix_turn_helix, Lux Regulon ATY43_17770 SM00849 Metallo-beta-lactamase superfamily ATY43_17780 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. ATY43_17805 SM00422 helix_turn_helix, mercury resistance ATY43_18115 SM00448 cheY-homologous receiver domain ATY43_18115 SM00862 Transcriptional regulatory protein, C terminal ATY43_18120 SM00387 Histidine kinase-like ATPases ATY43_18120 SM00388 His Kinase A (phosphoacceptor) domain ATY43_18125 SM01126 ATY43_18125 ATY43_18140 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ATY43_18185 SM00849 Metallo-beta-lactamase superfamily ATY43_18200 SM00382 ATPases associated with a variety of cellular activities ATY43_18220 SM00387 Histidine kinase-like ATPases ATY43_18220 SM00388 His Kinase A (phosphoacceptor) domain ATY43_18225 SM00448 cheY-homologous receiver domain ATY43_18225 SM00862 Transcriptional regulatory protein, C terminal ATY43_18285 SM00861 Transketolase, pyrimidine binding domain ATY43_18310 SM00028 Tetratricopeptide repeats ATY43_18310 SM00327 von Willebrand factor (vWF) type A domain ATY43_18315 SM00327 von Willebrand factor (vWF) type A domain ATY43_18330 SM00382 ATPases associated with a variety of cellular activities ATY43_18360 SM00965 Secretin and TonB N terminus short domain ATY43_18415 SM00487 DEAD-like helicases superfamily ATY43_18415 SM00490 helicase superfamily c-terminal domain ATY43_18425 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY43_18425 SM00954 Region found in RelA / SpoT proteins ATY43_18430 SM01409 ATY43_18430 ATY43_18450 SM00072 Guanylate kinase homologues. ATY43_18475 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY43_18505 SM01011 Aminopeptidase P, N-terminal domain ATY43_18600 SM00919 Malic enzyme, NAD binding domain ATY43_18600 SM01274 ATY43_18600 ATY43_18620 SM00387 Histidine kinase-like ATPases ATY43_18620 SM00388 His Kinase A (phosphoacceptor) domain ATY43_18620 SM00448 cheY-homologous receiver domain ATY43_18650 SM00421 helix_turn_helix, Lux Regulon ATY43_18650 SM00448 cheY-homologous receiver domain ATY43_18660 SM00387 Histidine kinase-like ATPases ATY43_18660 SM00388 His Kinase A (phosphoacceptor) domain ATY43_18665 SM00448 cheY-homologous receiver domain ATY43_18665 SM00862 Transcriptional regulatory protein, C terminal ATY43_18680 SM00822 ATY43_18680 ATY43_18685 SM00354 helix_turn _helix lactose operon repressor ATY43_18705 SM00642 Alpha-amylase domain ATY43_18715 SM01154 ATY43_18715 ATY43_18750 SM00450 Rhodanese Homology Domain ATY43_18815 SM00382 ATPases associated with a variety of cellular activities ATY43_18825 SM00460 Transglutaminase/protease-like homologues ATY43_18840 SM00493 ATY43_18840 ATY43_18855 SM00382 ATPases associated with a variety of cellular activities ATY43_18890 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY43_18895 SM00849 Metallo-beta-lactamase superfamily ATY43_18920 SM01126 ATY43_18920 ATY43_19000 SM00331 Sigma factor PP2C-like phosphatases ATY43_19000 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ATY43_19010 SM00479 ATY43_19010 ATY43_19025 SM00849 Metallo-beta-lactamase superfamily ATY43_19030 SM00257 Lysin motif ATY43_19055 SM00411 bacterial (prokaryotic) histone like domain ATY43_19060 SM00382 ATPases associated with a variety of cellular activities ATY43_19060 SM00464 Found in ATP-dependent protease La (LON) ATY43_19065 SM00382 ATPases associated with a variety of cellular activities ATY43_19065 SM00994 ClpX C4-type zinc finger ATY43_19065 SM01086 C-terminal, D2-small domain, of ClpB protein ATY43_19130 SM01329 ATY43_19130 ATY43_19135 SM01126 ATY43_19135 ATY43_19165 SM00448 cheY-homologous receiver domain ATY43_19165 SM00862 Transcriptional regulatory protein, C terminal ATY43_19170 SM00387 Histidine kinase-like ATPases ATY43_19170 SM00388 His Kinase A (phosphoacceptor) domain ATY43_19190 SM00014 Acid phosphatase homologues ATY43_19240 SM00855 Phosphoglycerate mutase family ATY43_19260 SM00829 Enoylreductase ATY43_19270 SM00382 ATPases associated with a variety of cellular activities ATY43_19315 SM00829 Enoylreductase ATY43_19375 SM01126 ATY43_19375 ATY43_19430 SM00838 Elongation factor G C-terminus ATY43_19555 SM01126 ATY43_19555 ATY43_19620 SM01126 ATY43_19620 ATY43_19630 SM01126 ATY43_19630 ATY43_19670 SM00342 helix_turn_helix, arabinose operon control protein ATY43_19710 SM00917 LeuA allosteric (dimerisation) domain ATY43_19715 SM01329 ATY43_19715 ATY43_19750 SM01126 ATY43_19750 ATY43_19825 SM00788 Adenylosuccinate synthetase ATY43_19835 SM00244 prohibitin homologues ATY43_19840 SM00244 prohibitin homologues ATY43_19845 SM00448 cheY-homologous receiver domain ATY43_19850 SM00271 DnaJ molecular chaperone homology domain ATY43_19925 SM00382 ATPases associated with a variety of cellular activities ATY43_19960 SM00825 Beta-ketoacyl synthase ATY43_19970 SM00822 ATY43_19970 ATY43_19975 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ATY43_20005 SM01126 ATY43_20005 ATY43_20010 SM00487 DEAD-like helicases superfamily ATY43_20080 SM00345 helix_turn_helix gluconate operon transcriptional repressor ATY43_20080 SM00866 ATY43_20080 ATY43_20150 SM00382 ATPases associated with a variety of cellular activities ATY43_20165 SM01211 ATY43_20165 ATY43_20250 SM00656 ATY43_20250 ATY43_20310 SM00528 Domain in histone-like proteins of HNS family ATY43_20325 SM00382 ATPases associated with a variety of cellular activities ATY43_20355 SM00882 Coenzyme A transferase ATY43_20360 SM00882 Coenzyme A transferase ATY43_20395 SM00893 Electron transfer flavoprotein domain ATY43_20400 SM00893 Electron transfer flavoprotein domain ATY43_20410 SM00382 ATPases associated with a variety of cellular activities ATY43_20470 SM00116 Domain in cystathionine beta-synthase and other proteins. ATY43_20505 SM00487 DEAD-like helicases superfamily ATY43_20505 SM00490 helicase superfamily c-terminal domain ATY43_20530 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY43_20555 SM00825 Beta-ketoacyl synthase ATY43_20650 SM01126 ATY43_20650 ATY43_20675 SM00830 Chorismate mutase type II ATY43_20685 SM00382 ATPases associated with a variety of cellular activities ATY43_20755 SM00986 Uracil DNA glycosylase superfamily ATY43_20755 SM00987 UreE urease accessory protein, C-terminal domain ATY43_20780 SM00382 ATPases associated with a variety of cellular activities ATY43_20780 SM00930 ATY43_20780 ATY43_20860 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY43_20860 SM00091 PAS domain ATY43_20860 SM00387 Histidine kinase-like ATPases ATY43_20860 SM00388 His Kinase A (phosphoacceptor) domain ATY43_20860 SM00448 cheY-homologous receiver domain ATY43_20880 SM01005 Alanine racemase, C-terminal domain ATY43_20890 SM00344 helix_turn_helix ASNC type ATY43_20935 SM00448 cheY-homologous receiver domain ATY43_20935 SM00862 Transcriptional regulatory protein, C terminal ATY43_20940 SM00387 Histidine kinase-like ATPases ATY43_20940 SM00388 His Kinase A (phosphoacceptor) domain ATY43_20975 SM00382 ATPases associated with a variety of cellular activities ATY43_20995 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. ATY43_21005 SM00986 Uracil DNA glycosylase superfamily ATY43_21005 SM00987 UreE urease accessory protein, C-terminal domain ATY43_21075 SM00850 LytTr DNA-binding domain ATY43_21080 SM00448 cheY-homologous receiver domain ATY43_21085 SM00387 Histidine kinase-like ATPases ATY43_21135 SM00138 Methyltransferase, chemotaxis proteins ATY43_21140 SM00448 cheY-homologous receiver domain ATY43_21150 SM00382 ATPases associated with a variety of cellular activities ATY43_21150 SM00448 cheY-homologous receiver domain ATY43_21285 SM01126 ATY43_21285 ATY43_21340 SM00100 Cyclic nucleotide-monophosphate binding domain ATY43_21340 SM00419 helix_turn_helix, cAMP Regulatory protein ATY43_21360 SM00903 Flavin reductase like domain ATY43_21605 SM00257 Lysin motif ATY43_21630 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain ATY43_21630 SM00437 Bacterial DNA topoisomerase I DNA-binding domain ATY43_21630 SM00493 ATY43_21630 ATY43_21685 SM00487 DEAD-like helicases superfamily ATY43_21685 SM00490 helicase superfamily c-terminal domain ATY43_21700 SM01126 ATY43_21700 ATY43_21735 SM00878 Biotin carboxylase C-terminal domain ATY43_21765 SM00530 Helix-turn-helix XRE-family like proteins ATY43_21780 SM01126 ATY43_21780 ATY43_21810 SM00912 haemagglutination activity domain ATY43_21835 SM01126 ATY43_21835 ATY43_21865 SM00798 AICARFT/IMPCHase bienzyme ATY43_21865 SM00851 MGS-like domain ATY43_21875 SM01209 ATY43_21875 ATY43_21875 SM01210 ATY43_21875 ATY43_21905 SM00563 Phosphate acyltransferases ATY43_21965 SM00052 Putative diguanylate phosphodiesterase ATY43_21965 SM00267 diguanylate cyclase ATY43_21965 SM00448 cheY-homologous receiver domain ATY43_21970 SM00073 Histidine Phosphotransfer domain ATY43_21970 SM00387 Histidine kinase-like ATPases ATY43_21970 SM00388 His Kinase A (phosphoacceptor) domain ATY43_21970 SM00448 cheY-homologous receiver domain ATY43_22055 SM00470 ParB-like nuclease domain ATY43_22075 SM01259 ATY43_22075 ATY43_22105 SM00836 DALR anticodon binding domain ATY43_22105 SM01016 Arginyl tRNA synthetase N terminal dom ATY43_22130 SM00090 RIO-like kinase ATY43_22155 SM00998 Adenylosuccinate lyase C-terminus ATY43_22230 SM00881 CoA binding domain ATY43_22240 SM00116 Domain in cystathionine beta-synthase and other proteins. ATY43_22240 SM00924 MgtE intracellular N domain ATY43_22265 SM00226 Low molecular weight phosphatase family ATY43_22270 SM00248 ankyrin repeats ATY43_22280 SM00825 Beta-ketoacyl synthase ATY43_22305 SM00822 ATY43_22305 ATY43_22320 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY43_22320 SM00876 Biotin and Thiamin Synthesis associated domain ATY43_22365 SM01060 ATY43_22365 ATY43_22415 SM00849 Metallo-beta-lactamase superfamily ATY43_22505 SM00387 Histidine kinase-like ATPases ATY43_22505 SM00388 His Kinase A (phosphoacceptor) domain ATY43_22510 SM00448 cheY-homologous receiver domain ATY43_22510 SM00862 Transcriptional regulatory protein, C terminal ATY43_22535 SM00248 ankyrin repeats ATY43_22540 SM01060 ATY43_22540 ATY43_22555 SM01126 ATY43_22555 ATY43_22570 SM00491 ATY43_22570 ATY43_22600 SM00477 DNA/RNA non-specific endonuclease ATY43_22600 SM00892 DNA/RNA non-specific endonuclease ATY43_22620 SM01004 Delta-aminolevulinic acid dehydratase ATY43_22665 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. ATY43_22685 SM00382 ATPases associated with a variety of cellular activities ATY43_22695 SM00530 Helix-turn-helix XRE-family like proteins ATY43_22720 SM00382 ATPases associated with a variety of cellular activities ATY43_22860 SM00563 Phosphate acyltransferases ATY43_22885 SM01126 ATY43_22885 ATY43_22905 SM00346 helix_turn_helix isocitrate lyase regulation ATY43_22925 SM00091 PAS domain ATY43_22925 SM00387 Histidine kinase-like ATPases ATY43_22925 SM00388 His Kinase A (phosphoacceptor) domain ATY43_22925 SM00448 cheY-homologous receiver domain ATY43_22955 SM00564 beta-propeller repeat ATY43_23010 SM01126 ATY43_23010 ATY43_23035 SM01126 ATY43_23035 ATY43_23050 SM00382 ATPases associated with a variety of cellular activities ATY43_23100 SM01126 ATY43_23100 ATY43_23105 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain ATY43_23105 SM01232 ATY43_23105 ATY43_23160 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY43_23160 SM00091 PAS domain ATY43_23225 SM00829 Enoylreductase ATY43_23295 SM00344 helix_turn_helix ASNC type ATY43_23345 SM00829 Enoylreductase ATY43_23375 SM00487 DEAD-like helicases superfamily ATY43_23375 SM00490 helicase superfamily c-terminal domain ATY43_23375 SM00847 Helicase associated domain (HA2) Add an annotation ATY43_23385 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ATY43_23440 SM00421 helix_turn_helix, Lux Regulon ATY43_23440 SM00448 cheY-homologous receiver domain ATY43_23550 SM00155 Phospholipase D. Active site motifs. ATY43_23575 SM01126 ATY43_23575 ATY43_23615 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY43_23650 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY43_23650 SM00245 tail specific protease ATY43_23845 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase ATY43_23870 SM00014 Acid phosphatase homologues ATY43_23880 SM00028 Tetratricopeptide repeats