locus-tag class description ATY44_00005 PF00308 Bacterial dnaA protein ATY44_00005 PF08299 Bacterial dnaA protein helix-turn-helix ATY44_00005 PF11638 DnaA N-terminal domain ATY44_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ATY44_00010 PF02767 DNA polymerase III beta subunit, central domain ATY44_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ATY44_00015 PF02463 RecF/RecN/SMC N terminal domain ATY44_00020 PF18053 DNA gyrase B subunit insert domain ATY44_00020 PF01751 Toprim domain ATY44_00020 PF00986 DNA gyrase B subunit, carboxyl terminus ATY44_00020 PF00204 DNA gyrase B ATY44_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_00030 PF01435 Peptidase family M48 ATY44_00040 PF03544 Gram-negative bacterial TonB protein C-terminal ATY44_00045 PF01618 MotA/TolQ/ExbB proton channel family ATY44_00050 PF02472 Biopolymer transport protein ExbD/TolR ATY44_00055 PF02472 Biopolymer transport protein ExbD/TolR ATY44_00060 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ATY44_00070 PF13091 PLD-like domain ATY44_00070 PF13396 Phospholipase_D-nuclease N-terminal ATY44_00080 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ATY44_00085 PF00155 Aminotransferase class I and II ATY44_00090 PF07715 TonB-dependent Receptor Plug Domain ATY44_00090 PF00593 TonB dependent receptor ATY44_00100 PF05598 Transposase domain (DUF772) ATY44_00100 PF01609 Transposase DDE domain ATY44_00105 PF01070 FMN-dependent dehydrogenase ATY44_00110 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family ATY44_00125 PF12241 Trans-2-enoyl-CoA reductase catalytic region ATY44_00125 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ATY44_00125 PF07055 Enoyl reductase FAD binding domain ATY44_00130 PF00294 pfkB family carbohydrate kinase ATY44_00160 PF01609 Transposase DDE domain ATY44_00160 PF05598 Transposase domain (DUF772) ATY44_00210 PF13344 Haloacid dehalogenase-like hydrolase ATY44_00210 PF00293 NUDIX domain ATY44_00225 PF00665 Integrase core domain ATY44_00225 PF13936 Helix-turn-helix domain ATY44_00260 PF01370 NAD dependent epimerase/dehydratase family ATY44_00260 PF08338 Domain of unknown function (DUF1731) ATY44_00265 PF00512 His Kinase A (phospho-acceptor) domain ATY44_00265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_00265 PF08521 Two-component sensor kinase N-terminal ATY44_00275 PF00595 PDZ domain ATY44_00300 PF05819 NolX protein ATY44_00345 PF01313 Bacterial export proteins, family 3 ATY44_00350 PF00813 FliP family ATY44_00365 PF00771 FHIPEP family ATY44_00370 PF01312 FlhB HrpN YscU SpaS Family ATY44_00385 PF01514 Secretory protein of YscJ/FliF family ATY44_00400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATY44_00400 PF18269 T3SS EscN ATPase C-terminal domain ATY44_00400 PF02874 ATP synthase alpha/beta family, beta-barrel domain ATY44_00410 PF01311 Bacterial export proteins, family 1 ATY44_00425 PF01464 Transglycosylase SLT domain ATY44_00430 PF05598 Transposase domain (DUF772) ATY44_00460 PF00924 Mechanosensitive ion channel ATY44_00460 PF12795 Mechanosensitive ion channel porin domain ATY44_00460 PF12794 Mechanosensitive ion channel inner membrane domain 1 ATY44_00470 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_00480 PF03109 ABC1 family ATY44_00485 PF05661 Protein of unknown function (DUF808) ATY44_00495 PF00990 Diguanylate cyclase, GGDEF domain ATY44_00495 PF00072 Response regulator receiver domain ATY44_00500 PF08323 Starch synthase catalytic domain ATY44_00500 PF00534 Glycosyl transferases group 1 ATY44_00505 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ATY44_00505 PF02806 Alpha amylase, C-terminal all-beta domain ATY44_00505 PF00128 Alpha amylase, catalytic domain ATY44_00510 PF11941 Domain of unknown function (DUF3459) ATY44_00510 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ATY44_00510 PF00128 Alpha amylase, catalytic domain ATY44_00515 PF02446 4-alpha-glucanotransferase ATY44_00520 PF00128 Alpha amylase, catalytic domain ATY44_00530 PF00128 Alpha amylase, catalytic domain ATY44_00530 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ATY44_00535 PF13460 NAD(P)H-binding ATY44_00540 PF05598 Transposase domain (DUF772) ATY44_00545 PF03150 Di-haem cytochrome c peroxidase ATY44_00600 PF06903 VirK protein ATY44_00610 PF00271 Helicase conserved C-terminal domain ATY44_00610 PF00270 DEAD/DEAH box helicase ATY44_00620 PF05598 Transposase domain (DUF772) ATY44_00620 PF01609 Transposase DDE domain ATY44_00640 PF00364 Biotin-requiring enzyme ATY44_00640 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ATY44_00650 PF05598 Transposase domain (DUF772) ATY44_00675 PF13533 Biotin-lipoyl like ATY44_00690 PF00005 ABC transporter ATY44_00705 PF13936 Helix-turn-helix domain ATY44_00705 PF00665 Integrase core domain ATY44_00715 PF08845 Toxin SymE, type I toxin-antitoxin system ATY44_00730 PF03006 Haemolysin-III related ATY44_00735 PF00270 DEAD/DEAH box helicase ATY44_00735 PF09369 Domain of unknown function (DUF1998) ATY44_00735 PF00271 Helicase conserved C-terminal domain ATY44_00790 PF01645 Conserved region in glutamate synthase ATY44_00790 PF01493 GXGXG motif ATY44_00790 PF04898 Glutamate synthase central domain ATY44_00790 PF00310 Glutamine amidotransferases class-II ATY44_00795 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ATY44_00795 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY44_00815 PF13936 Helix-turn-helix domain ATY44_00815 PF00665 Integrase core domain ATY44_00830 PF05598 Transposase domain (DUF772) ATY44_00835 PF04962 KduI/IolB family ATY44_00840 PF04962 KduI/IolB family ATY44_00845 PF00356 Bacterial regulatory proteins, lacI family ATY44_00865 PF00128 Alpha amylase, catalytic domain ATY44_00865 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ATY44_00865 PF02806 Alpha amylase, C-terminal all-beta domain ATY44_00870 PF16657 Maltogenic Amylase, C-terminal domain ATY44_00870 PF00128 Alpha amylase, catalytic domain ATY44_00875 PF00128 Alpha amylase, catalytic domain ATY44_00875 PF11896 Domain of unknown function (DUF3416) ATY44_00895 PF00872 Transposase, Mutator family ATY44_00910 PF05598 Transposase domain (DUF772) ATY44_00920 PF01078 Magnesium chelatase, subunit ChlI ATY44_00920 PF13335 Magnesium chelatase, subunit ChlI C-terminal ATY44_00925 PF04380 Membrane fusogenic activity ATY44_00930 PF00543 Nitrogen regulatory protein P-II ATY44_00955 PF17284 Spermidine synthase tetramerisation domain ATY44_00960 PF17810 Arginine decarboxylase helical bundle domain ATY44_00960 PF17944 Arginine decarboxylase C-terminal helical extension ATY44_00960 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ATY44_00975 PF16671 Actin cross-linking domain ATY44_00975 PF04717 Type VI secretion system, phage-baseplate injector ATY44_00995 PF13932 GidA associated domain ATY44_00995 PF01134 Glucose inhibited division protein A ATY44_01005 PF00291 Pyridoxal-phosphate dependent enzyme ATY44_01025 PF13649 Methyltransferase domain ATY44_01035 PF12697 Alpha/beta hydrolase family ATY44_01045 PF13276 HTH-like domain ATY44_01045 PF13683 Integrase core domain ATY44_01055 PF04349 Periplasmic glucan biosynthesis protein, MdoG ATY44_01065 PF00265 Thymidine kinase ATY44_01070 PF13361 UvrD-like helicase C-terminal domain ATY44_01070 PF00580 UvrD/REP helicase N-terminal domain ATY44_01085 PF04337 Protein of unknown function, DUF480 ATY44_01090 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) ATY44_01095 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ATY44_01100 PF04820 Tryptophan halogenase ATY44_01115 PF00356 Bacterial regulatory proteins, lacI family ATY44_01125 PF01553 Acyltransferase ATY44_01130 PF08240 Alcohol dehydrogenase GroES-like domain ATY44_01130 PF14765 Polyketide synthase dehydratase ATY44_01130 PF00550 Phosphopantetheine attachment site ATY44_01130 PF08659 KR domain ATY44_01130 PF02801 Beta-ketoacyl synthase, C-terminal domain ATY44_01130 PF00109 Beta-ketoacyl synthase, N-terminal domain ATY44_01130 PF16197 Ketoacyl-synthetase C-terminal extension ATY44_01130 PF00698 Acyl transferase domain ATY44_01145 PF01527 Transposase ATY44_01150 PF00872 Transposase, Mutator family ATY44_01200 PF01734 Patatin-like phospholipase ATY44_01210 PF00005 ABC transporter ATY44_01225 PF00571 CBS domain ATY44_01225 PF00005 ABC transporter ATY44_01230 PF00528 Binding-protein-dependent transport system inner membrane component ATY44_01240 PF03781 Sulfatase-modifying factor enzyme 1 ATY44_01240 PF12867 DinB superfamily ATY44_01245 PF10017 Histidine-specific methyltransferase, SAM-dependent ATY44_01250 PF13657 HipA N-terminal domain ATY44_01250 PF07804 HipA-like C-terminal domain ATY44_01255 PF01381 Helix-turn-helix ATY44_01275 PF01883 Iron-sulfur cluster assembly protein ATY44_01275 PF10609 NUBPL iron-transfer P-loop NTPase ATY44_01290 PF13091 PLD-like domain ATY44_01295 PF03061 Thioesterase superfamily ATY44_01335 PF02673 Bacitracin resistance protein BacA ATY44_01340 PF00120 Glutamine synthetase, catalytic domain ATY44_01340 PF03951 Glutamine synthetase, beta-Grasp domain ATY44_01345 PF00543 Nitrogen regulatory protein P-II ATY44_01350 PF00909 Ammonium Transporter Family ATY44_01355 PF00989 PAS fold ATY44_01355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_01355 PF00512 His Kinase A (phospho-acceptor) domain ATY44_01360 PF00158 Sigma-54 interaction domain ATY44_01360 PF00072 Response regulator receiver domain ATY44_01360 PF02954 Bacterial regulatory protein, Fis family ATY44_01365 PF00080 Copper/zinc superoxide dismutase (SODC) ATY44_01370 PF00080 Copper/zinc superoxide dismutase (SODC) ATY44_01430 PF17946 RecC C-terminal domain ATY44_01435 PF13361 UvrD-like helicase C-terminal domain ATY44_01435 PF00580 UvrD/REP helicase N-terminal domain ATY44_01435 PF12705 PD-(D/E)XK nuclease superfamily ATY44_01440 PF13538 UvrD-like helicase C-terminal domain ATY44_01445 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB ATY44_01450 PF01381 Helix-turn-helix ATY44_01520 PF02566 OsmC-like protein ATY44_01525 PF01047 MarR family ATY44_01555 PF00440 Bacterial regulatory proteins, tetR family ATY44_01560 PF00111 2Fe-2S iron-sulfur cluster binding domain ATY44_01560 PF00175 Oxidoreductase NAD-binding domain ATY44_01560 PF00970 Oxidoreductase FAD-binding domain ATY44_01565 PF00487 Fatty acid desaturase ATY44_01580 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_01605 PF04616 Glycosyl hydrolases family 43 ATY44_01630 PF00553 Cellulose binding domain ATY44_01630 PF03422 Carbohydrate binding module (family 6) ATY44_01630 PF00331 Glycosyl hydrolase family 10 ATY44_01635 PF00553 Cellulose binding domain ATY44_01635 PF00331 Glycosyl hydrolase family 10 ATY44_01635 PF03422 Carbohydrate binding module (family 6) ATY44_01640 PF02614 Glucuronate isomerase ATY44_01660 PF08125 Mannitol dehydrogenase C-terminal domain ATY44_01660 PF01232 Mannitol dehydrogenase Rossmann domain ATY44_01665 PF07691 PA14 domain ATY44_01665 PF01915 Glycosyl hydrolase family 3 C-terminal domain ATY44_01665 PF00933 Glycosyl hydrolase family 3 N terminal domain ATY44_01665 PF14310 Fibronectin type III-like domain ATY44_01670 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain ATY44_01670 PF04616 Glycosyl hydrolases family 43 ATY44_01675 PF13378 Enolase C-terminal domain-like ATY44_01675 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ATY44_01685 PF07477 Glycosyl hydrolase family 67 C-terminus ATY44_01685 PF07488 Glycosyl hydrolase family 67 middle domain ATY44_01685 PF03648 Glycosyl hydrolase family 67 N-terminus ATY44_01690 PF00356 Bacterial regulatory proteins, lacI family ATY44_01700 PF01171 PP-loop family ATY44_01705 PF04381 Putative exonuclease, RdgC ATY44_01720 PF12697 Alpha/beta hydrolase family ATY44_01725 PF00762 Ferrochelatase ATY44_01735 PF02416 mttA/Hcf106 family ATY44_01740 PF02416 mttA/Hcf106 family ATY44_01745 PF00902 Sec-independent protein translocase protein (TatC) ATY44_01755 PF00117 Glutamine amidotransferase class-I ATY44_01755 PF00958 GMP synthase C terminal domain ATY44_01770 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ATY44_01770 PF00437 Type II/IV secretion system protein ATY44_01775 PF02091 Glycyl-tRNA synthetase alpha subunit ATY44_01780 PF02092 Glycyl-tRNA synthetase beta subunit ATY44_01780 PF05746 DALR anticodon binding domain ATY44_01785 PF13181 Tetratricopeptide repeat ATY44_01790 PF07715 TonB-dependent Receptor Plug Domain ATY44_01790 PF00593 TonB dependent receptor ATY44_01800 PF00664 ABC transporter transmembrane region ATY44_01800 PF00005 ABC transporter ATY44_01800 PF03412 Peptidase C39 family ATY44_01805 PF03969 AFG1-like ATPase ATY44_01825 PF02492 CobW/HypB/UreG, nucleotide-binding domain ATY44_01825 PF07683 Cobalamin synthesis protein cobW C-terminal domain ATY44_01885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATY44_01885 PF02770 Acyl-CoA dehydrogenase, middle domain ATY44_01885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATY44_01890 PF01039 Carboxyl transferase domain ATY44_01895 PF00364 Biotin-requiring enzyme ATY44_01895 PF02785 Biotin carboxylase C-terminal domain ATY44_01895 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ATY44_01895 PF00289 Biotin carboxylase, N-terminal domain ATY44_01900 PF00326 Prolyl oligopeptidase family ATY44_01905 PF13936 Helix-turn-helix domain ATY44_01905 PF00665 Integrase core domain ATY44_01945 PF01014 Uricase ATY44_01945 PF09349 OHCU decarboxylase ATY44_01960 PF00266 Aminotransferase class-V ATY44_02000 PF01026 TatD related DNase ATY44_02010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY44_02010 PF03466 LysR substrate binding domain ATY44_02015 PF07690 Major Facilitator Superfamily ATY44_02025 PF02146 Sir2 family ATY44_02030 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ATY44_02035 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ATY44_02035 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ATY44_02045 PF00551 Formyl transferase ATY44_02050 PF00486 Transcriptional regulatory protein, C terminal ATY44_02050 PF00072 Response regulator receiver domain ATY44_02055 PF00672 HAMP domain ATY44_02055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_02055 PF00512 His Kinase A (phospho-acceptor) domain ATY44_02060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_02060 PF00512 His Kinase A (phospho-acceptor) domain ATY44_02060 PF00672 HAMP domain ATY44_02070 PF02677 Epoxyqueuosine reductase QueH ATY44_02075 PF03466 LysR substrate binding domain ATY44_02075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY44_02080 PF03358 NADPH-dependent FMN reductase ATY44_02090 PF08267 Cobalamin-independent synthase, N-terminal domain ATY44_02090 PF01717 Cobalamin-independent synthase, Catalytic domain ATY44_02095 PF03812 2-keto-3-deoxygluconate permease ATY44_02105 PF05368 NmrA-like family ATY44_02110 PF01638 HxlR-like helix-turn-helix ATY44_02170 PF04820 Tryptophan halogenase ATY44_02175 PF00550 Phosphopantetheine attachment site ATY44_02185 PF01553 Acyltransferase ATY44_02190 PF07977 FabA-like domain ATY44_02225 PF04357 TamB, inner membrane protein subunit of TAM complex ATY44_02230 PF01103 Surface antigen ATY44_02230 PF17243 POTRA domain TamA domain 1 ATY44_02240 PF01527 Transposase ATY44_02250 PF07497 Rho termination factor, RNA-binding domain ATY44_02250 PF07498 Rho termination factor, N-terminal domain ATY44_02250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATY44_02255 PF00085 Thioredoxin ATY44_02260 PF00270 DEAD/DEAH box helicase ATY44_02260 PF00271 Helicase conserved C-terminal domain ATY44_02260 PF12300 ATP-dependent RNA helicase RhlB ATY44_02265 PF00005 ABC transporter ATY44_02270 PF18075 FtsX extracellular domain ATY44_02275 PF00072 Response regulator receiver domain ATY44_02275 PF01339 CheB methylesterase ATY44_02280 PF03167 Uracil DNA glycosylase superfamily ATY44_02285 PF04545 Sigma-70, region 4 ATY44_02285 PF04542 Sigma-70 region 2 ATY44_02295 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY44_02320 PF00166 Chaperonin 10 Kd subunit ATY44_02325 PF00118 TCP-1/cpn60 chaperonin family ATY44_02335 PF07715 TonB-dependent Receptor Plug Domain ATY44_02335 PF00593 TonB dependent receptor ATY44_02345 PF00793 DAHP synthetase I family ATY44_02385 PF08450 SMP-30/Gluconolactonase/LRE-like region ATY44_02395 PF08335 GlnD PII-uridylyltransferase ATY44_02395 PF03710 Glutamate-ammonia ligase adenylyltransferase ATY44_02400 PF02592 Putative vitamin uptake transporter ATY44_02430 PF00881 Nitroreductase family ATY44_02435 PF04264 YceI-like domain ATY44_02465 PF01527 Transposase ATY44_02480 PF05598 Transposase domain (DUF772) ATY44_02490 PF03377 TAL effector repeat ATY44_02520 PF00456 Transketolase, thiamine diphosphate binding domain ATY44_02520 PF17831 Pyruvate dehydrogenase E1 component middle domain ATY44_02525 PF01966 HD domain ATY44_02525 PF13286 Phosphohydrolase-associated domain ATY44_02560 PF01612 3'-5' exonuclease ATY44_02560 PF00476 DNA polymerase family A ATY44_02560 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ATY44_02560 PF01367 5'-3' exonuclease, C-terminal SAM fold ATY44_02565 PF01218 Coproporphyrinogen III oxidase ATY44_02580 PF01609 Transposase DDE domain ATY44_02580 PF05598 Transposase domain (DUF772) ATY44_02590 PF05598 Transposase domain (DUF772) ATY44_02595 PF13495 Phage integrase, N-terminal SAM-like domain ATY44_02595 PF00589 Phage integrase family ATY44_02600 PF00920 Dehydratase family ATY44_02605 PF03692 Putative zinc- or iron-chelating domain ATY44_02610 PF00132 Bacterial transferase hexapeptide (six repeats) ATY44_02615 PF07690 Major Facilitator Superfamily ATY44_02620 PF01966 HD domain ATY44_02620 PF11871 Domain of unknown function (DUF3391) ATY44_02625 PF05598 Transposase domain (DUF772) ATY44_02635 PF05598 Transposase domain (DUF772) ATY44_02640 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family ATY44_02645 PF00501 AMP-binding enzyme ATY44_02650 PF03692 Putative zinc- or iron-chelating domain ATY44_02655 PF00561 alpha/beta hydrolase fold ATY44_02665 PF01555 DNA methylase ATY44_02670 PF02661 Fic/DOC family ATY44_02670 PF13784 Fic/DOC family N-terminal ATY44_02675 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ATY44_02675 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ATY44_02690 PF00588 SpoU rRNA Methylase family ATY44_02695 PF07690 Major Facilitator Superfamily ATY44_02710 PF00072 Response regulator receiver domain ATY44_02710 PF00158 Sigma-54 interaction domain ATY44_02710 PF02954 Bacterial regulatory protein, Fis family ATY44_02715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_02715 PF00512 His Kinase A (phospho-acceptor) domain ATY44_02720 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ATY44_02720 PF00205 Thiamine pyrophosphate enzyme, central domain ATY44_02720 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ATY44_02730 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ATY44_02730 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ATY44_02735 PF02556 Preprotein translocase subunit SecB ATY44_02740 PF00581 Rhodanese-like domain ATY44_02765 PF07063 Domain of unknown function (DUF1338) ATY44_02770 PF00873 AcrB/AcrD/AcrF family ATY44_02775 PF00873 AcrB/AcrD/AcrF family ATY44_02780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ATY44_02785 PF07687 Peptidase dimerisation domain ATY44_02785 PF01546 Peptidase family M20/M25/M40 ATY44_02795 PF14489 QueF-like protein ATY44_02795 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ATY44_02800 PF00872 Transposase, Mutator family ATY44_02840 PF00005 ABC transporter ATY44_02855 PF00593 TonB dependent receptor ATY44_02855 PF07715 TonB-dependent Receptor Plug Domain ATY44_02900 PF10410 DnaB-helicase binding domain of primase ATY44_02900 PF08278 DNA primase DnaG DnaB-binding ATY44_02900 PF08275 DNA primase catalytic core, N-terminal domain ATY44_02900 PF01807 CHC2 zinc finger ATY44_02905 PF03631 Virulence factor BrkB ATY44_02910 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_02920 PF09424 Yqey-like protein ATY44_02925 PF01165 Ribosomal protein S21 ATY44_02930 PF00814 Glycoprotease family ATY44_02935 PF02152 Dihydroneopterin aldolase ATY44_02940 PF00933 Glycosyl hydrolase family 3 N terminal domain ATY44_02940 PF14310 Fibronectin type III-like domain ATY44_02940 PF01915 Glycosyl hydrolase family 3 C-terminal domain ATY44_02945 PF13936 Helix-turn-helix domain ATY44_02945 PF00665 Integrase core domain ATY44_02995 PF07995 Glucose / Sorbosone dehydrogenase ATY44_03005 PF05360 yiaA/B two helix domain ATY44_03020 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_03030 PF13520 Amino acid permease ATY44_03055 PF13378 Enolase C-terminal domain-like ATY44_03055 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ATY44_03065 PF01510 N-acetylmuramoyl-L-alanine amidase ATY44_03070 PF01609 Transposase DDE domain ATY44_03070 PF05598 Transposase domain (DUF772) ATY44_03075 PF01427 D-ala-D-ala dipeptidase ATY44_03110 PF05598 Transposase domain (DUF772) ATY44_03110 PF01609 Transposase DDE domain ATY44_03160 PF02803 Thiolase, C-terminal domain ATY44_03160 PF00108 Thiolase, N-terminal domain ATY44_03195 PF03301 Tryptophan 2,3-dioxygenase ATY44_03200 PF00854 POT family ATY44_03210 PF01047 MarR family ATY44_03215 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ATY44_03220 PF04209 homogentisate 1,2-dioxygenase ATY44_03225 PF03334 Na+/H+ antiporter subunit ATY44_03230 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ATY44_03240 PF00361 Proton-conducting membrane transporter ATY44_03245 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ATY44_03250 PF13244 Domain of unknown function (DUF4040) ATY44_03250 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ATY44_03250 PF00361 Proton-conducting membrane transporter ATY44_03250 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ATY44_03265 PF01447 Thermolysin metallopeptidase, catalytic domain ATY44_03265 PF03413 Peptidase propeptide and YPEB domain ATY44_03265 PF07504 Fungalysin/Thermolysin Propeptide Motif ATY44_03265 PF02868 Thermolysin metallopeptidase, alpha-helical domain ATY44_03270 PF07504 Fungalysin/Thermolysin Propeptide Motif ATY44_03270 PF01483 Proprotein convertase P-domain ATY44_03270 PF01447 Thermolysin metallopeptidase, catalytic domain ATY44_03270 PF02868 Thermolysin metallopeptidase, alpha-helical domain ATY44_03275 PF01447 Thermolysin metallopeptidase, catalytic domain ATY44_03275 PF02868 Thermolysin metallopeptidase, alpha-helical domain ATY44_03275 PF07504 Fungalysin/Thermolysin Propeptide Motif ATY44_03275 PF01483 Proprotein convertase P-domain ATY44_03290 PF01259 SAICAR synthetase ATY44_03295 PF05099 Tellurite resistance protein TerB ATY44_03295 PF00226 DnaJ domain ATY44_03300 PF00834 Ribulose-phosphate 3 epimerase family ATY44_03305 PF00583 Acetyltransferase (GNAT) family ATY44_03310 PF00781 Diacylglycerol kinase catalytic domain ATY44_03315 PF00425 chorismate binding enzyme ATY44_03315 PF04715 Anthranilate synthase component I, N terminal region ATY44_03325 PF01527 Transposase ATY44_03340 PF00106 short chain dehydrogenase ATY44_03375 PF07759 Protein of unknown function (DUF1615) ATY44_03400 PF00892 EamA-like transporter family ATY44_03405 PF03330 Lytic transglycolase ATY44_03410 PF00553 Cellulose binding domain ATY44_03410 PF00041 Fibronectin type III domain ATY44_03410 PF01341 Glycosyl hydrolases family 6 ATY44_03415 PF00324 Amino acid permease ATY44_03425 PF01544 CorA-like Mg2+ transporter protein ATY44_03445 PF01204 Trehalase ATY44_03465 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_03490 PF03707 Bacterial signalling protein N terminal repeat ATY44_03490 PF00563 EAL domain ATY44_03490 PF00990 Diguanylate cyclase, GGDEF domain ATY44_03495 PF02203 Tar ligand binding domain homologue ATY44_03495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY44_03495 PF00672 HAMP domain ATY44_03505 PF00150 Cellulase (glycosyl hydrolase family 5) ATY44_03505 PF00553 Cellulose binding domain ATY44_03510 PF01740 STAS domain ATY44_03510 PF00916 Sulfate permease family ATY44_03520 PF00990 Diguanylate cyclase, GGDEF domain ATY44_03520 PF08448 PAS fold ATY44_03540 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_03545 PF13632 Glycosyl transferase family group 2 ATY44_03555 PF07694 5TMR of 5TMR-LYT ATY44_03555 PF06580 Histidine kinase ATY44_03560 PF04397 LytTr DNA-binding domain ATY44_03560 PF00072 Response regulator receiver domain ATY44_03565 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ATY44_03565 PF03900 Porphobilinogen deaminase, C-terminal domain ATY44_03590 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ATY44_03590 PF00326 Prolyl oligopeptidase family ATY44_03600 PF00155 Aminotransferase class I and II ATY44_03605 PF00326 Prolyl oligopeptidase family ATY44_03605 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ATY44_03620 PF01678 Diaminopimelate epimerase ATY44_03630 PF00589 Phage integrase family ATY44_03630 PF02899 Phage integrase, N-terminal SAM-like domain ATY44_03635 PF00227 Proteasome subunit ATY44_03640 PF10431 C-terminal, D2-small domain, of ClpB protein ATY44_03640 PF07724 AAA domain (Cdc48 subfamily) ATY44_03640 PF00004 ATPase family associated with various cellular activities (AAA) ATY44_03655 PF11838 ERAP1-like C-terminal domain ATY44_03655 PF01433 Peptidase family M1 domain ATY44_03660 PF00990 Diguanylate cyclase, GGDEF domain ATY44_03660 PF17152 Periplasmic sensor domain ATY44_03665 PF01209 ubiE/COQ5 methyltransferase family ATY44_03675 PF13533 Biotin-lipoyl like ATY44_03690 PF13673 Acetyltransferase (GNAT) domain ATY44_03715 PF05598 Transposase domain (DUF772) ATY44_03715 PF01609 Transposase DDE domain ATY44_03720 PF00294 pfkB family carbohydrate kinase ATY44_03730 PF04085 rod shape-determining protein MreC ATY44_03740 PF00905 Penicillin binding protein transpeptidase domain ATY44_03740 PF03717 Penicillin-binding Protein dimerisation domain ATY44_03745 PF01098 Cell cycle protein ATY44_03780 PF04717 Type VI secretion system, phage-baseplate injector ATY44_03780 PF16671 Actin cross-linking domain ATY44_03790 PF05598 Transposase domain (DUF772) ATY44_03800 PF13406 Transglycosylase SLT domain ATY44_03805 PF03330 Lytic transglycolase ATY44_03805 PF05036 Sporulation related domain ATY44_03815 PF00768 D-alanyl-D-alanine carboxypeptidase ATY44_03815 PF07943 Penicillin-binding protein 5, C-terminal domain ATY44_03825 PF04359 Protein of unknown function (DUF493) ATY44_03830 PF03099 Biotin/lipoate A/B protein ligase family ATY44_03835 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ATY44_03835 PF04055 Radical SAM superfamily ATY44_03840 PF17804 Tail specific protease N-terminal domain ATY44_03840 PF03572 Peptidase family S41 ATY44_03840 PF11818 C-terminal domain of tail specific protease (DUF3340) ATY44_03840 PF00595 PDZ domain ATY44_03850 PF00293 NUDIX domain ATY44_03850 PF01467 Cytidylyltransferase-like ATY44_03890 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ATY44_03890 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ATY44_03895 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ATY44_03895 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ATY44_03900 PF04972 BON domain ATY44_03905 PF08446 PAS fold ATY44_03905 PF01590 GAF domain ATY44_03905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_03905 PF00512 His Kinase A (phospho-acceptor) domain ATY44_03905 PF00360 Phytochrome region ATY44_03910 PF00072 Response regulator receiver domain ATY44_03915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_03915 PF00512 His Kinase A (phospho-acceptor) domain ATY44_03920 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ATY44_03940 PF13683 Integrase core domain ATY44_03940 PF13276 HTH-like domain ATY44_03950 PF01527 Transposase ATY44_03980 PF07690 Major Facilitator Superfamily ATY44_03985 PF00356 Bacterial regulatory proteins, lacI family ATY44_03990 PF01380 SIS domain ATY44_03995 PF01979 Amidohydrolase family ATY44_04005 PF00535 Glycosyl transferase family 2 ATY44_04010 PF01522 Polysaccharide deacetylase ATY44_04010 PF14883 Hypothetical glycosyl hydrolase family 13 ATY44_04035 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_04050 PF01966 HD domain ATY44_04050 PF01743 Poly A polymerase head domain ATY44_04050 PF12627 Probable RNA and SrmB- binding site of polymerase A ATY44_04080 PF05598 Transposase domain (DUF772) ATY44_04090 PF01527 Transposase ATY44_04105 PF13291 ACT domain ATY44_04105 PF00291 Pyridoxal-phosphate dependent enzyme ATY44_04110 PF05598 Transposase domain (DUF772) ATY44_04110 PF01609 Transposase DDE domain ATY44_04115 PF01527 Transposase ATY44_04125 PF02028 BCCT, betaine/carnitine/choline family transporter ATY44_04145 PF00034 Cytochrome c ATY44_04150 PF01926 50S ribosome-binding GTPase ATY44_04160 PF04107 Glutamate-cysteine ligase family 2(GCS2) ATY44_04195 PF00672 HAMP domain ATY44_04195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_04195 PF16527 Two-component sensor protein CpxA, periplasmic domain ATY44_04195 PF00512 His Kinase A (phospho-acceptor) domain ATY44_04200 PF00486 Transcriptional regulatory protein, C terminal ATY44_04200 PF00072 Response regulator receiver domain ATY44_04215 PF02583 Metal-sensitive transcriptional repressor ATY44_04220 PF08240 Alcohol dehydrogenase GroES-like domain ATY44_04220 PF00107 Zinc-binding dehydrogenase ATY44_04230 PF00756 Putative esterase ATY44_04235 PF05598 Transposase domain (DUF772) ATY44_04250 PF00005 ABC transporter ATY44_04250 PF12848 ABC transporter ATY44_04270 PF00464 Serine hydroxymethyltransferase ATY44_04280 PF03477 ATP cone domain ATY44_04290 PF01872 RibD C-terminal domain ATY44_04290 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ATY44_04300 PF00677 Lumazine binding domain ATY44_04305 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ATY44_04305 PF00925 GTP cyclohydrolase II ATY44_04310 PF00885 6,7-dimethyl-8-ribityllumazine synthase ATY44_04315 PF01029 NusB family ATY44_04320 PF00586 AIR synthase related protein, N-terminal domain ATY44_04320 PF02769 AIR synthase related protein, C-terminal domain ATY44_04345 PF03814 Potassium-transporting ATPase A subunit ATY44_04355 PF02669 K+-transporting ATPase, c chain ATY44_04360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_04360 PF02702 Osmosensitive K+ channel His kinase sensor domain ATY44_04360 PF00512 His Kinase A (phospho-acceptor) domain ATY44_04360 PF13492 GAF domain ATY44_04360 PF13493 Domain of unknown function (DUF4118) ATY44_04365 PF00072 Response regulator receiver domain ATY44_04365 PF00486 Transcriptional regulatory protein, C terminal ATY44_04370 PF01565 FAD binding domain ATY44_04370 PF02913 FAD linked oxidases, C-terminal domain ATY44_04375 PF04307 LexA-binding, inner membrane-associated putative hydrolase ATY44_04380 PF02021 Uncharacterised protein family UPF0102 ATY44_04390 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ATY44_04405 PF02381 MraZ protein, putative antitoxin-like ATY44_04410 PF01795 MraW methylase family ATY44_04415 PF04999 Cell division protein FtsL ATY44_04420 PF03717 Penicillin-binding Protein dimerisation domain ATY44_04420 PF00905 Penicillin binding protein transpeptidase domain ATY44_04425 PF08245 Mur ligase middle domain ATY44_04425 PF01225 Mur ligase family, catalytic domain ATY44_04425 PF02875 Mur ligase family, glutamate ligase domain ATY44_04430 PF02875 Mur ligase family, glutamate ligase domain ATY44_04430 PF08245 Mur ligase middle domain ATY44_04430 PF01225 Mur ligase family, catalytic domain ATY44_04435 PF00953 Glycosyl transferase family 4 ATY44_04440 PF01098 Cell cycle protein ATY44_04445 PF04101 Glycosyltransferase family 28 C-terminal domain ATY44_04445 PF03033 Glycosyltransferase family 28 N-terminal domain ATY44_04450 PF02875 Mur ligase family, glutamate ligase domain ATY44_04450 PF01225 Mur ligase family, catalytic domain ATY44_04450 PF08245 Mur ligase middle domain ATY44_04455 PF07478 D-ala D-ala ligase C-terminus ATY44_04455 PF01820 D-ala D-ala ligase N-terminus ATY44_04460 PF03799 Cell division protein FtsQ ATY44_04460 PF08478 POTRA domain, FtsQ-type ATY44_04465 PF02491 SHS2 domain inserted in FTSA ATY44_04470 PF12327 FtsZ family, C-terminal domain ATY44_04470 PF00091 Tubulin/FtsZ family, GTPase domain ATY44_04475 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ATY44_04485 PF01551 Peptidase family M23 ATY44_04485 PF01476 LysM domain ATY44_04490 PF02810 SEC-C motif ATY44_04490 PF07517 SecA DEAD-like domain ATY44_04490 PF01043 SecA preprotein cross-linking domain ATY44_04490 PF07516 SecA Wing and Scaffold domain ATY44_04500 PF00293 NUDIX domain ATY44_04515 PF02219 Methylenetetrahydrofolate reductase ATY44_04525 PF00550 Phosphopantetheine attachment site ATY44_04525 PF14765 Polyketide synthase dehydratase ATY44_04525 PF08659 KR domain ATY44_04525 PF02801 Beta-ketoacyl synthase, C-terminal domain ATY44_04525 PF00107 Zinc-binding dehydrogenase ATY44_04525 PF16197 Ketoacyl-synthetase C-terminal extension ATY44_04525 PF08240 Alcohol dehydrogenase GroES-like domain ATY44_04525 PF00698 Acyl transferase domain ATY44_04525 PF00109 Beta-ketoacyl synthase, N-terminal domain ATY44_04530 PF09286 Pro-kumamolisin, activation domain ATY44_04530 PF00082 Subtilase family ATY44_04545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ATY44_04575 PF13649 Methyltransferase domain ATY44_04580 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ATY44_04580 PF05221 S-adenosyl-L-homocysteine hydrolase ATY44_04590 PF00311 Phosphoenolpyruvate carboxylase ATY44_04610 PF00328 Histidine phosphatase superfamily (branch 2) ATY44_04615 PF02772 S-adenosylmethionine synthetase, central domain ATY44_04615 PF00438 S-adenosylmethionine synthetase, N-terminal domain ATY44_04615 PF02773 S-adenosylmethionine synthetase, C-terminal domain ATY44_04625 PF13649 Methyltransferase domain ATY44_04630 PF01207 Dihydrouridine synthase (Dus) ATY44_04645 PF00294 pfkB family carbohydrate kinase ATY44_04650 PF07670 Nucleoside recognition ATY44_04650 PF07662 Na+ dependent nucleoside transporter C-terminus ATY44_04650 PF01773 Na+ dependent nucleoside transporter N-terminus ATY44_04660 PF00248 Aldo/keto reductase family ATY44_04670 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_04700 PF00005 ABC transporter ATY44_04710 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ATY44_04720 PF00005 ABC transporter ATY44_04725 PF13472 GDSL-like Lipase/Acylhydrolase family ATY44_04730 PF00486 Transcriptional regulatory protein, C terminal ATY44_04730 PF00072 Response regulator receiver domain ATY44_04735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_04735 PF08521 Two-component sensor kinase N-terminal ATY44_04735 PF00512 His Kinase A (phospho-acceptor) domain ATY44_04750 PF01219 Prokaryotic diacylglycerol kinase ATY44_04770 PF01790 Prolipoprotein diacylglyceryl transferase ATY44_04775 PF00303 Thymidylate synthase ATY44_04785 PF00186 Dihydrofolate reductase ATY44_04790 PF00149 Calcineurin-like phosphoesterase ATY44_04795 PF04379 ApaG domain ATY44_04800 PF00398 Ribosomal RNA adenine dimethylase ATY44_04805 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ATY44_04810 PF00639 PPIC-type PPIASE domain ATY44_04810 PF09312 SurA N-terminal domain ATY44_04815 PF04453 LPS transport system D ATY44_04815 PF03968 OstA-like protein ATY44_04820 PF00850 Histone deacetylase domain ATY44_04825 PF01923 Cobalamin adenosyltransferase ATY44_04835 PF01494 FAD binding domain ATY44_04840 PF01494 FAD binding domain ATY44_04870 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ATY44_04880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY44_04880 PF03466 LysR substrate binding domain ATY44_04885 PF13193 AMP-binding enzyme C-terminal domain ATY44_04885 PF00501 AMP-binding enzyme ATY44_04890 PF00171 Aldehyde dehydrogenase family ATY44_04895 PF00378 Enoyl-CoA hydratase/isomerase ATY44_04915 PF08450 SMP-30/Gluconolactonase/LRE-like region ATY44_04920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ATY44_04920 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ATY44_04925 PF01728 FtsJ-like methyltransferase ATY44_04925 PF18125 RlmM ferredoxin-like domain ATY44_04965 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_04975 PF13936 Helix-turn-helix domain ATY44_04975 PF00665 Integrase core domain ATY44_04980 PF00749 tRNA synthetases class I (E and Q), catalytic domain ATY44_04980 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ATY44_05000 PF00990 Diguanylate cyclase, GGDEF domain ATY44_05000 PF00072 Response regulator receiver domain ATY44_05005 PF00072 Response regulator receiver domain ATY44_05005 PF00512 His Kinase A (phospho-acceptor) domain ATY44_05005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_05005 PF01627 Hpt domain ATY44_05005 PF00672 HAMP domain ATY44_05005 PF17149 Periplasmic sensor domain found in signal transduction proteins ATY44_05025 PF00072 Response regulator receiver domain ATY44_05025 PF00196 Bacterial regulatory proteins, luxR family ATY44_05045 PF01625 Peptide methionine sulfoxide reductase ATY44_05065 PF00923 Transaldolase/Fructose-6-phosphate aldolase ATY44_05070 PF01272 Transcription elongation factor, GreA/GreB, C-term ATY44_05070 PF03449 Transcription elongation factor, N-terminal ATY44_05075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY44_05075 PF03466 LysR substrate binding domain ATY44_05080 PF13192 Thioredoxin domain ATY44_05080 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY44_05085 PF00578 AhpC/TSA family ATY44_05085 PF10417 C-terminal domain of 1-Cys peroxiredoxin ATY44_05090 PF17827 PrmC N-terminal domain ATY44_05090 PF05175 Methyltransferase small domain ATY44_05115 PF00561 alpha/beta hydrolase fold ATY44_05125 PF00293 NUDIX domain ATY44_05130 PF01612 3'-5' exonuclease ATY44_05130 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ATY44_05130 PF01367 5'-3' exonuclease, C-terminal SAM fold ATY44_05130 PF00476 DNA polymerase family A ATY44_05145 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ATY44_05145 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ATY44_05145 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ATY44_05165 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ATY44_05170 PF02233 NAD(P) transhydrogenase beta subunit ATY44_05195 PF01063 Amino-transferase class IV ATY44_05205 PF00082 Subtilase family ATY44_05205 PF04151 Bacterial pre-peptidase C-terminal domain ATY44_05210 PF00082 Subtilase family ATY44_05210 PF04151 Bacterial pre-peptidase C-terminal domain ATY44_05215 PF04073 Aminoacyl-tRNA editing domain ATY44_05225 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain ATY44_05225 PF17189 Glycosyl hydrolase family 30 beta sandwich domain ATY44_05235 PF03358 NADPH-dependent FMN reductase ATY44_05240 PF03631 Virulence factor BrkB ATY44_05245 PF08534 Redoxin ATY44_05250 PF00708 Acylphosphatase ATY44_05260 PF03976 Polyphosphate kinase 2 (PPK2) ATY44_05265 PF00994 Probable molybdopterin binding domain ATY44_05275 PF03462 PCRF domain ATY44_05275 PF00472 RF-1 domain ATY44_05280 PF01488 Shikimate / quinate 5-dehydrogenase ATY44_05280 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ATY44_05280 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ATY44_05290 PF03550 Outer membrane lipoprotein LolB ATY44_05295 PF00288 GHMP kinases N terminal domain ATY44_05295 PF08544 GHMP kinases C terminal ATY44_05305 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ATY44_05305 PF14572 Phosphoribosyl synthetase-associated domain ATY44_05310 PF01386 Ribosomal L25p family ATY44_05310 PF14693 Ribosomal protein TL5, C-terminal domain ATY44_05315 PF01195 Peptidyl-tRNA hydrolase ATY44_05320 PF06071 Protein of unknown function (DUF933) ATY44_05320 PF01926 50S ribosome-binding GTPase ATY44_05340 PF03143 Elongation factor Tu C-terminal domain ATY44_05340 PF03144 Elongation factor Tu domain 2 ATY44_05340 PF00009 Elongation factor Tu GTP binding domain ATY44_05350 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ATY44_05355 PF00467 KOW motif ATY44_05355 PF02357 Transcription termination factor nusG ATY44_05360 PF03946 Ribosomal protein L11, N-terminal domain ATY44_05360 PF00298 Ribosomal protein L11, RNA binding domain ATY44_05365 PF00687 Ribosomal protein L1p/L10e family ATY44_05370 PF00466 Ribosomal protein L10 ATY44_05375 PF00542 Ribosomal protein L7/L12 C-terminal domain ATY44_05375 PF16320 Ribosomal protein L7/L12 dimerisation domain ATY44_05380 PF04561 RNA polymerase Rpb2, domain 2 ATY44_05380 PF04565 RNA polymerase Rpb2, domain 3 ATY44_05380 PF10385 RNA polymerase beta subunit external 1 domain ATY44_05380 PF00562 RNA polymerase Rpb2, domain 6 ATY44_05380 PF04560 RNA polymerase Rpb2, domain 7 ATY44_05380 PF04563 RNA polymerase beta subunit ATY44_05385 PF04997 RNA polymerase Rpb1, domain 1 ATY44_05385 PF05000 RNA polymerase Rpb1, domain 4 ATY44_05385 PF04983 RNA polymerase Rpb1, domain 3 ATY44_05385 PF00623 RNA polymerase Rpb1, domain 2 ATY44_05385 PF04998 RNA polymerase Rpb1, domain 5 ATY44_05390 PF00164 Ribosomal protein S12/S23 ATY44_05395 PF00177 Ribosomal protein S7p/S5e ATY44_05400 PF03764 Elongation factor G, domain IV ATY44_05400 PF03144 Elongation factor Tu domain 2 ATY44_05400 PF00009 Elongation factor Tu GTP binding domain ATY44_05400 PF14492 Elongation Factor G, domain II ATY44_05400 PF00679 Elongation factor G C-terminus ATY44_05405 PF03143 Elongation factor Tu C-terminal domain ATY44_05405 PF03144 Elongation factor Tu domain 2 ATY44_05405 PF00009 Elongation factor Tu GTP binding domain ATY44_05415 PF00338 Ribosomal protein S10p/S20e ATY44_05420 PF00297 Ribosomal protein L3 ATY44_05425 PF00573 Ribosomal protein L4/L1 family ATY44_05430 PF00276 Ribosomal protein L23 ATY44_05435 PF03947 Ribosomal Proteins L2, C-terminal domain ATY44_05435 PF00181 Ribosomal Proteins L2, RNA binding domain ATY44_05440 PF00203 Ribosomal protein S19 ATY44_05445 PF00237 Ribosomal protein L22p/L17e ATY44_05450 PF07650 KH domain ATY44_05450 PF00189 Ribosomal protein S3, C-terminal domain ATY44_05455 PF00252 Ribosomal protein L16p/L10e ATY44_05460 PF00831 Ribosomal L29 protein ATY44_05465 PF00366 Ribosomal protein S17 ATY44_05470 PF00238 Ribosomal protein L14p/L23e ATY44_05475 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ATY44_05475 PF00467 KOW motif ATY44_05480 PF00673 ribosomal L5P family C-terminus ATY44_05480 PF00281 Ribosomal protein L5 ATY44_05485 PF00253 Ribosomal protein S14p/S29e ATY44_05490 PF00410 Ribosomal protein S8 ATY44_05495 PF00347 Ribosomal protein L6 ATY44_05500 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ATY44_05505 PF00333 Ribosomal protein S5, N-terminal domain ATY44_05505 PF03719 Ribosomal protein S5, C-terminal domain ATY44_05510 PF00327 Ribosomal protein L30p/L7e ATY44_05515 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ATY44_05520 PF00344 SecY translocase ATY44_05525 PF00416 Ribosomal protein S13/S18 ATY44_05530 PF00411 Ribosomal protein S11 ATY44_05535 PF01479 S4 domain ATY44_05535 PF00163 Ribosomal protein S4/S9 N-terminal domain ATY44_05540 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ATY44_05540 PF01000 RNA polymerase Rpb3/RpoA insert domain ATY44_05540 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ATY44_05545 PF01196 Ribosomal protein L17 ATY44_05570 PF01527 Transposase ATY44_05605 PF02347 Glycine cleavage system P-protein ATY44_05625 PF00005 ABC transporter ATY44_05625 PF03412 Peptidase C39 family ATY44_05625 PF00664 ABC transporter transmembrane region ATY44_05645 PF08019 Phosphoethanolamine transferase EptA/EptB ATY44_05645 PF00884 Sulfatase ATY44_05655 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ATY44_05660 PF00486 Transcriptional regulatory protein, C terminal ATY44_05660 PF00072 Response regulator receiver domain ATY44_05665 PF00512 His Kinase A (phospho-acceptor) domain ATY44_05665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_05665 PF08521 Two-component sensor kinase N-terminal ATY44_05675 PF03776 Septum formation topological specificity factor MinE ATY44_05680 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ATY44_05685 PF05209 Septum formation inhibitor MinC, N-terminal domain ATY44_05685 PF03775 Septum formation inhibitor MinC, C-terminal domain ATY44_05705 PF07730 Histidine kinase ATY44_05710 PF00072 Response regulator receiver domain ATY44_05710 PF00196 Bacterial regulatory proteins, luxR family ATY44_05725 PF00730 HhH-GPD superfamily base excision DNA repair protein ATY44_05750 PF02222 ATP-grasp domain ATY44_05755 PF01527 Transposase ATY44_05790 PF00691 OmpA family ATY44_05790 PF04972 BON domain ATY44_05805 PF04717 Type VI secretion system, phage-baseplate injector ATY44_05815 PF03781 Sulfatase-modifying factor enzyme 1 ATY44_05825 PF03781 Sulfatase-modifying factor enzyme 1 ATY44_05830 PF04717 Type VI secretion system, phage-baseplate injector ATY44_05875 PF03781 Sulfatase-modifying factor enzyme 1 ATY44_05880 PF04717 Type VI secretion system, phage-baseplate injector ATY44_05930 PF16671 Actin cross-linking domain ATY44_05930 PF04717 Type VI secretion system, phage-baseplate injector ATY44_05935 PF13276 HTH-like domain ATY44_05935 PF13683 Integrase core domain ATY44_05940 PF01527 Transposase ATY44_05955 PF16671 Actin cross-linking domain ATY44_05955 PF04717 Type VI secretion system, phage-baseplate injector ATY44_05980 PF16671 Actin cross-linking domain ATY44_05980 PF04717 Type VI secretion system, phage-baseplate injector ATY44_06005 PF16671 Actin cross-linking domain ATY44_06005 PF04717 Type VI secretion system, phage-baseplate injector ATY44_06010 PF04717 Type VI secretion system, phage-baseplate injector ATY44_06010 PF16671 Actin cross-linking domain ATY44_06065 PF07724 AAA domain (Cdc48 subfamily) ATY44_06065 PF17871 AAA lid domain ATY44_06065 PF10431 C-terminal, D2-small domain, of ClpB protein ATY44_06065 PF00004 ATPase family associated with various cellular activities (AAA) ATY44_06075 PF04717 Type VI secretion system, phage-baseplate injector ATY44_06075 PF16671 Actin cross-linking domain ATY44_06110 PF01420 Type I restriction modification DNA specificity domain ATY44_06115 PF02384 N-6 DNA Methylase ATY44_06125 PF00271 Helicase conserved C-terminal domain ATY44_06125 PF04851 Type III restriction enzyme, res subunit ATY44_06125 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ATY44_06125 PF08463 EcoEI R protein C-terminal ATY44_06145 PF02384 N-6 DNA Methylase ATY44_06150 PF08780 Nucleotidyltransferase substrate binding protein like ATY44_06155 PF01909 Nucleotidyltransferase domain ATY44_06160 PF18766 SWI2/SNF2 ATPase ATY44_06160 PF11867 Domain of unknown function (DUF3387) ATY44_06160 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ATY44_06240 PF00717 Peptidase S24-like ATY44_06240 PF01726 LexA DNA binding domain ATY44_06255 PF07733 Bacterial DNA polymerase III alpha NTPase domain ATY44_06255 PF14579 Helix-hairpin-helix motif ATY44_06255 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ATY44_06255 PF02811 PHP domain ATY44_06270 PF03169 OPT oligopeptide transporter protein ATY44_06285 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ATY44_06285 PF07676 WD40-like Beta Propeller Repeat ATY44_06285 PF00326 Prolyl oligopeptidase family ATY44_06310 PF02311 AraC-like ligand binding domain ATY44_06310 PF12833 Helix-turn-helix domain ATY44_06330 PF00199 Catalase ATY44_06330 PF18011 C-terminal domain found in long catalases ATY44_06330 PF06628 Catalase-related immune-responsive ATY44_06345 PF01609 Transposase DDE domain ATY44_06345 PF05598 Transposase domain (DUF772) ATY44_06370 PF00162 Phosphoglycerate kinase ATY44_06380 PF00224 Pyruvate kinase, barrel domain ATY44_06380 PF02887 Pyruvate kinase, alpha/beta domain ATY44_06385 PF00274 Fructose-bisphosphate aldolase class-I ATY44_06390 PF01661 Macro domain ATY44_06405 PF00291 Pyridoxal-phosphate dependent enzyme ATY44_06410 PF10414 Sirohaem synthase dimerisation region ATY44_06410 PF14824 Sirohaem biosynthesis protein central ATY44_06410 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ATY44_06415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY44_06415 PF03466 LysR substrate binding domain ATY44_06425 PF01627 Hpt domain ATY44_06425 PF00672 HAMP domain ATY44_06425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_06425 PF00512 His Kinase A (phospho-acceptor) domain ATY44_06425 PF00072 Response regulator receiver domain ATY44_06445 PF01507 Phosphoadenosine phosphosulfate reductase family ATY44_06450 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ATY44_06450 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ATY44_06455 PF00258 Flavodoxin ATY44_06455 PF00667 FAD binding domain ATY44_06455 PF00175 Oxidoreductase NAD-binding domain ATY44_06460 PF01507 Phosphoadenosine phosphosulfate reductase family ATY44_06465 PF00009 Elongation factor Tu GTP binding domain ATY44_06470 PF00529 HlyD membrane-fusion protein of T1SS ATY44_06470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ATY44_06475 PF00873 AcrB/AcrD/AcrF family ATY44_06480 PF11838 ERAP1-like C-terminal domain ATY44_06480 PF01433 Peptidase family M1 domain ATY44_06510 PF08032 RNA 2'-O ribose methyltransferase substrate binding ATY44_06510 PF00588 SpoU rRNA Methylase family ATY44_06515 PF00135 Carboxylesterase family ATY44_06540 PF01741 Large-conductance mechanosensitive channel, MscL ATY44_06545 PF01557 Fumarylacetoacetate (FAA) hydrolase family ATY44_06550 PF13936 Helix-turn-helix domain ATY44_06550 PF00665 Integrase core domain ATY44_06570 PF05598 Transposase domain (DUF772) ATY44_06585 PF02080 TrkA-C domain ATY44_06585 PF03600 Citrate transporter ATY44_06590 PF02390 Putative methyltransferase ATY44_06595 PF05690 Thiazole biosynthesis protein ThiG ATY44_06605 PF03797 Autotransporter beta-domain ATY44_06605 PF00657 GDSL-like Lipase/Acylhydrolase ATY44_06630 PF01527 Transposase ATY44_06665 PF00665 Integrase core domain ATY44_06665 PF13936 Helix-turn-helix domain ATY44_06670 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_06695 PF05598 Transposase domain (DUF772) ATY44_06695 PF01609 Transposase DDE domain ATY44_06700 PF00128 Alpha amylase, catalytic domain ATY44_06700 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ATY44_06710 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_06720 PF01609 Transposase DDE domain ATY44_06720 PF05598 Transposase domain (DUF772) ATY44_06765 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_06780 PF00085 Thioredoxin ATY44_06790 PF00133 tRNA synthetases class I (I, L, M and V) ATY44_06790 PF08264 Anticodon-binding domain of tRNA ATY44_06790 PF13603 Leucyl-tRNA synthetase, Domain 2 ATY44_06805 PF01467 Cytidylyltransferase-like ATY44_06830 PF02590 Predicted SPOUT methyltransferase ATY44_06855 PF05598 Transposase domain (DUF772) ATY44_06855 PF01609 Transposase DDE domain ATY44_06865 PF04402 Protein of unknown function (DUF541) ATY44_06870 PF02545 Maf-like protein ATY44_06875 PF10150 Ribonuclease E/G family ATY44_06875 PF00575 S1 RNA binding domain ATY44_06880 PF13116 Protein of unknown function ATY44_06880 PF13502 AsmA-like C-terminal region ATY44_06890 PF01523 Putative modulator of DNA gyrase ATY44_06895 PF04751 Protein of unknown function (DUF615) ATY44_06900 PF01523 Putative modulator of DNA gyrase ATY44_06920 PF00348 Polyprenyl synthetase ATY44_06925 PF02609 Exonuclease VII small subunit ATY44_06930 PF11734 TilS substrate C-terminal domain ATY44_06930 PF09179 TilS substrate binding domain ATY44_06930 PF01171 PP-loop family ATY44_06935 PF00245 Alkaline phosphatase ATY44_06940 PF00375 Sodium:dicarboxylate symporter family ATY44_06955 PF00877 NlpC/P60 family ATY44_06960 PF00877 NlpC/P60 family ATY44_06965 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATY44_06970 PF04235 Protein of unknown function (DUF418) ATY44_06975 PF01266 FAD dependent oxidoreductase ATY44_07010 PF10609 NUBPL iron-transfer P-loop NTPase ATY44_07015 PF00692 dUTPase ATY44_07030 PF01738 Dienelactone hydrolase family ATY44_07035 PF18693 TRAM domain ATY44_07035 PF00919 Uncharacterized protein family UPF0004 ATY44_07035 PF04055 Radical SAM superfamily ATY44_07040 PF03449 Transcription elongation factor, N-terminal ATY44_07040 PF01272 Transcription elongation factor, GreA/GreB, C-term ATY44_07060 PF13936 Helix-turn-helix domain ATY44_07060 PF00665 Integrase core domain ATY44_07065 PF05872 Bacterial protein of unknown function (DUF853) ATY44_07075 PF02666 Phosphatidylserine decarboxylase ATY44_07080 PF02630 SCO1/SenC ATY44_07085 PF05175 Methyltransferase small domain ATY44_07090 PF01264 Chorismate synthase ATY44_07095 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ATY44_07095 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATY44_07100 PF01118 Semialdehyde dehydrogenase, NAD binding domain ATY44_07100 PF02774 Semialdehyde dehydrogenase, dimerisation domain ATY44_07115 PF01416 tRNA pseudouridine synthase ATY44_07120 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ATY44_07125 PF03466 LysR substrate binding domain ATY44_07125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY44_07130 PF00291 Pyridoxal-phosphate dependent enzyme ATY44_07140 PF00290 Tryptophan synthase alpha chain ATY44_07145 PF01039 Carboxyl transferase domain ATY44_07145 PF17848 Acetyl-coA carboxylase zinc finger domain ATY44_07150 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ATY44_07150 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ATY44_07150 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ATY44_07150 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ATY44_07165 PF03707 Bacterial signalling protein N terminal repeat ATY44_07165 PF00563 EAL domain ATY44_07165 PF00990 Diguanylate cyclase, GGDEF domain ATY44_07175 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_07195 PF00121 Triosephosphate isomerase ATY44_07210 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ATY44_07215 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ATY44_07220 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ATY44_07225 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ATY44_07235 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ATY44_07235 PF10531 SLBB domain ATY44_07235 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ATY44_07240 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal ATY44_07240 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ATY44_07240 PF00384 Molybdopterin oxidoreductase ATY44_07245 PF00146 NADH dehydrogenase ATY44_07250 PF12838 4Fe-4S dicluster domain ATY44_07255 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ATY44_07260 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ATY44_07265 PF00361 Proton-conducting membrane transporter ATY44_07265 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ATY44_07270 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus ATY44_07270 PF00361 Proton-conducting membrane transporter ATY44_07275 PF00361 Proton-conducting membrane transporter ATY44_07285 PF02576 RimP N-terminal domain ATY44_07285 PF17384 RimP C-terminal SH3 domain ATY44_07290 PF08529 NusA N-terminal domain ATY44_07290 PF13184 NusA-like KH domain ATY44_07290 PF00575 S1 RNA binding domain ATY44_07295 PF04760 Translation initiation factor IF-2, N-terminal region ATY44_07295 PF00009 Elongation factor Tu GTP binding domain ATY44_07295 PF11987 Translation-initiation factor 2 ATY44_07295 PF08364 Bacterial translation initiation factor IF-2 associated region ATY44_07300 PF02033 Ribosome-binding factor A ATY44_07305 PF16198 tRNA pseudouridylate synthase B C-terminal domain ATY44_07305 PF01509 TruB family pseudouridylate synthase (N terminal domain) ATY44_07305 PF09157 Pseudouridine synthase II TruB, C-terminal ATY44_07310 PF00312 Ribosomal protein S15 ATY44_07315 PF00575 S1 RNA binding domain ATY44_07315 PF03725 3' exoribonuclease family, domain 2 ATY44_07315 PF01138 3' exoribonuclease family, domain 1 ATY44_07315 PF00013 KH domain ATY44_07315 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ATY44_07325 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ATY44_07325 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ATY44_07335 PF00731 AIR carboxylase ATY44_07340 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ATY44_07340 PF02222 ATP-grasp domain ATY44_07345 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ATY44_07345 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ATY44_07350 PF00462 Glutaredoxin ATY44_07360 PF01914 MarC family integral membrane protein ATY44_07365 PF00593 TonB dependent receptor ATY44_07370 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ATY44_07370 PF11892 Domain of unknown function (DUF3412) ATY44_07370 PF03641 Possible lysine decarboxylase ATY44_07375 PF01609 Transposase DDE domain ATY44_07375 PF05598 Transposase domain (DUF772) ATY44_07380 PF07963 Prokaryotic N-terminal methylation motif ATY44_07380 PF12019 Type II transport protein GspH ATY44_07400 PF05567 Neisseria PilC beta-propeller domain ATY44_07405 PF00114 Pilin (bacterial filament) ATY44_07405 PF07963 Prokaryotic N-terminal methylation motif ATY44_07415 PF07963 Prokaryotic N-terminal methylation motif ATY44_07415 PF00114 Pilin (bacterial filament) ATY44_07420 PF00271 Helicase conserved C-terminal domain ATY44_07420 PF12344 Ultra-violet resistance protein B ATY44_07420 PF04851 Type III restriction enzyme, res subunit ATY44_07420 PF17757 UvrB interaction domain ATY44_07420 PF02151 UvrB/uvrC motif ATY44_07445 PF01527 Transposase ATY44_07455 PF02824 TGS domain ATY44_07455 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ATY44_07455 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ATY44_07455 PF03129 Anticodon binding domain ATY44_07460 PF00707 Translation initiation factor IF-3, C-terminal domain ATY44_07460 PF05198 Translation initiation factor IF-3, N-terminal domain ATY44_07465 PF01632 Ribosomal protein L35 ATY44_07470 PF00453 Ribosomal protein L20 ATY44_07475 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ATY44_07475 PF01409 tRNA synthetases class II core domain (F) ATY44_07480 PF03483 B3/4 domain ATY44_07480 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ATY44_07480 PF01588 Putative tRNA binding domain ATY44_07480 PF03147 Ferredoxin-fold anticodon binding domain ATY44_07480 PF03484 tRNA synthetase B5 domain ATY44_07485 PF00216 Bacterial DNA-binding protein ATY44_07490 PF13411 MerR HTH family regulatory protein ATY44_07510 PF02397 Bacterial sugar transferase ATY44_07530 PF13439 Glycosyltransferase Family 4 ATY44_07530 PF00534 Glycosyl transferases group 1 ATY44_07540 PF14667 Polysaccharide biosynthesis C-terminal domain ATY44_07555 PF03808 Glycosyl transferase WecB/TagA/CpsF family ATY44_07685 PF00072 Response regulator receiver domain ATY44_07685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_07685 PF13426 PAS domain ATY44_07690 PF04362 Bacterial Fe(2+) trafficking ATY44_07695 PF14815 NUDIX domain ATY44_07695 PF00730 HhH-GPD superfamily base excision DNA repair protein ATY44_07695 PF00633 Helix-hairpin-helix motif ATY44_07705 PF00448 SRP54-type protein, GTPase domain ATY44_07705 PF02881 SRP54-type protein, helical bundle domain ATY44_07715 PF05544 Proline racemase ATY44_07720 PF01266 FAD dependent oxidoreductase ATY44_07730 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY44_07730 PF04324 BFD-like [2Fe-2S] binding domain ATY44_07735 PF00701 Dihydrodipicolinate synthetase family ATY44_07740 PF00171 Aldehyde dehydrogenase family ATY44_07745 PF00557 Metallopeptidase family M24 ATY44_07745 PF01321 Creatinase/Prolidase N-terminal domain ATY44_07760 PF13520 Amino acid permease ATY44_07800 PF09286 Pro-kumamolisin, activation domain ATY44_07800 PF00082 Subtilase family ATY44_07810 PF07715 TonB-dependent Receptor Plug Domain ATY44_07810 PF00593 TonB dependent receptor ATY44_07815 PF07532 Bacterial Ig-like domain (group 4) ATY44_07820 PF04616 Glycosyl hydrolases family 43 ATY44_07835 PF00593 TonB dependent receptor ATY44_07835 PF07715 TonB-dependent Receptor Plug Domain ATY44_07885 PF03454 MoeA C-terminal region (domain IV) ATY44_07885 PF00994 Probable molybdopterin binding domain ATY44_07885 PF03453 MoeA N-terminal region (domain I and II) ATY44_07890 PF12804 MobA-like NTP transferase domain ATY44_07915 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ATY44_07915 PF10414 Sirohaem synthase dimerisation region ATY44_07915 PF14824 Sirohaem biosynthesis protein central ATY44_07925 PF03861 ANTAR domain ATY44_07925 PF00072 Response regulator receiver domain ATY44_07975 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ATY44_07975 PF01648 4'-phosphopantetheinyl transferase superfamily ATY44_07985 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ATY44_07985 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ATY44_07985 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ATY44_07995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATY44_08010 PF00196 Bacterial regulatory proteins, luxR family ATY44_08010 PF00072 Response regulator receiver domain ATY44_08015 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_08025 PF10150 Ribonuclease E/G family ATY44_08025 PF00575 S1 RNA binding domain ATY44_08025 PF12111 Polyribonucleotide phosphorylase C terminal ATY44_08030 PF01479 S4 domain ATY44_08030 PF00849 RNA pseudouridylate synthase ATY44_08035 PF11737 Protein of unknown function (DUF3300) ATY44_08040 PF02535 ZIP Zinc transporter ATY44_08045 PF02535 ZIP Zinc transporter ATY44_08055 PF01329 Pterin 4 alpha carbinolamine dehydratase ATY44_08060 PF01106 NifU-like domain ATY44_08070 PF13276 HTH-like domain ATY44_08070 PF13683 Integrase core domain ATY44_08095 PF05598 Transposase domain (DUF772) ATY44_08125 PF01609 Transposase DDE domain ATY44_08125 PF05598 Transposase domain (DUF772) ATY44_08150 PF05638 Type VI secretion system effector, Hcp ATY44_08175 PF07724 AAA domain (Cdc48 subfamily) ATY44_08175 PF17871 AAA lid domain ATY44_08175 PF10431 C-terminal, D2-small domain, of ClpB protein ATY44_08175 PF00004 ATPase family associated with various cellular activities (AAA) ATY44_08190 PF01609 Transposase DDE domain ATY44_08190 PF05598 Transposase domain (DUF772) ATY44_08200 PF16671 Actin cross-linking domain ATY44_08200 PF04717 Type VI secretion system, phage-baseplate injector ATY44_08240 PF00069 Protein kinase domain ATY44_08255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY44_08255 PF03466 LysR substrate binding domain ATY44_08260 PF00512 His Kinase A (phospho-acceptor) domain ATY44_08260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_08265 PF00034 Cytochrome c ATY44_08265 PF03150 Di-haem cytochrome c peroxidase ATY44_08270 PF00072 Response regulator receiver domain ATY44_08270 PF00486 Transcriptional regulatory protein, C terminal ATY44_08275 PF01526 Tn3 transposase DDE domain ATY44_08275 PF13700 Domain of unknown function (DUF4158) ATY44_08285 PF13276 HTH-like domain ATY44_08290 PF01527 Transposase ATY44_08320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ATY44_08320 PF00529 HlyD membrane-fusion protein of T1SS ATY44_08325 PF00873 AcrB/AcrD/AcrF family ATY44_08335 PF00873 AcrB/AcrD/AcrF family ATY44_08340 PF03377 TAL effector repeat ATY44_08355 PF03377 TAL effector repeat ATY44_08365 PF03918 Cytochrome C biogenesis protein ATY44_08370 PF08534 Redoxin ATY44_08375 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ATY44_08375 PF01578 Cytochrome C assembly protein ATY44_08380 PF03100 CcmE ATY44_08385 PF04995 Heme exporter protein D (CcmD) ATY44_08390 PF01578 Cytochrome C assembly protein ATY44_08395 PF00082 Subtilase family ATY44_08405 PF08281 Sigma-70, region 4 ATY44_08405 PF04542 Sigma-70 region 2 ATY44_08415 PF00034 Cytochrome c ATY44_08430 PF05523 WxcM-like, C-terminal ATY44_08450 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ATY44_08455 PF01943 Polysaccharide biosynthesis protein ATY44_08460 PF00535 Glycosyl transferase family 2 ATY44_08475 PF08241 Methyltransferase domain ATY44_08495 PF13579 Glycosyl transferase 4-like domain ATY44_08495 PF00534 Glycosyl transferases group 1 ATY44_08510 PF00005 ABC transporter ATY44_08515 PF00005 ABC transporter ATY44_08515 PF00664 ABC transporter transmembrane region ATY44_08520 PF07690 Major Facilitator Superfamily ATY44_08525 PF00296 Luciferase-like monooxygenase ATY44_08540 PF00571 CBS domain ATY44_08540 PF01595 Cyclin M transmembrane N-terminal domain ATY44_08540 PF03471 Transporter associated domain ATY44_08550 PF01384 Phosphate transporter family ATY44_08575 PF00986 DNA gyrase B subunit, carboxyl terminus ATY44_08575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_08575 PF00204 DNA gyrase B ATY44_08575 PF01751 Toprim domain ATY44_08585 PF00117 Glutamine amidotransferase class-I ATY44_08585 PF06418 CTP synthase N-terminus ATY44_08590 PF00793 DAHP synthetase I family ATY44_08600 PF03952 Enolase, N-terminal domain ATY44_08600 PF00113 Enolase, C-terminal TIM barrel domain ATY44_08605 PF04977 Septum formation initiator ATY44_08610 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ATY44_08615 PF02542 YgbB family ATY44_08620 PF01142 tRNA pseudouridine synthase D (TruD) ATY44_08625 PF01713 Smr domain ATY44_08630 PF01975 Survival protein SurE ATY44_08640 PF09335 SNARE associated Golgi protein ATY44_08645 PF01551 Peptidase family M23 ATY44_08645 PF01476 LysM domain ATY44_08655 PF01985 CRS1 / YhbY (CRM) domain ATY44_08660 PF01728 FtsJ-like methyltransferase ATY44_08665 PF06480 FtsH Extracellular ATY44_08665 PF17862 AAA+ lid domain ATY44_08665 PF00004 ATPase family associated with various cellular activities (AAA) ATY44_08665 PF01434 Peptidase family M41 ATY44_08670 PF00809 Pterin binding enzyme ATY44_08680 PF17209 Hfq protein ATY44_08685 PF16360 GTP-binding GTPase Middle Region ATY44_08685 PF13167 GTP-binding GTPase N-terminal ATY44_08685 PF01926 50S ribosome-binding GTPase ATY44_08690 PF02464 Competence-damaged protein ATY44_08695 PF03109 ABC1 family ATY44_08700 PF01726 LexA DNA binding domain ATY44_08700 PF00717 Peptidase S24-like ATY44_08705 PF00154 recA bacterial DNA recombination protein ATY44_08710 PF02631 RecX family ATY44_08715 PF01411 tRNA synthetases class II (A) ATY44_08715 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ATY44_08715 PF02272 DHHA1 domain ATY44_08720 PF02599 Global regulator protein family ATY44_08740 PF00772 DnaB-like helicase N terminal domain ATY44_08740 PF03796 DnaB-like helicase C terminal domain ATY44_08765 PF17954 Quercetinase C-terminal cupin domain ATY44_08765 PF02678 Pirin ATY44_08770 PF03466 LysR substrate binding domain ATY44_08770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY44_08800 PF08543 Phosphomethylpyrimidine kinase ATY44_08810 PF02562 PhoH-like protein ATY44_08810 PF13638 PIN domain ATY44_08815 PF00578 AhpC/TSA family ATY44_08830 PF00701 Dihydrodipicolinate synthetase family ATY44_08840 PF00037 4Fe-4S binding domain ATY44_08840 PF11953 Domain of unknown function (DUF3470) ATY44_08845 PF05035 2-keto-3-deoxy-galactonokinase ATY44_08850 PF08450 SMP-30/Gluconolactonase/LRE-like region ATY44_08855 PF13378 Enolase C-terminal domain-like ATY44_08855 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ATY44_08860 PF01081 KDPG and KHG aldolase ATY44_08865 PF03466 LysR substrate binding domain ATY44_08865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY44_08875 PF16338 Domain of unknown function (DUF4968) ATY44_08875 PF17137 Domain of unknown function (DUF5110) ATY44_08875 PF01055 Glycosyl hydrolases family 31 ATY44_08890 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ATY44_08890 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ATY44_08900 PF00083 Sugar (and other) transporter ATY44_08920 PF08207 Elongation factor P (EF-P) KOW-like domain ATY44_08920 PF01132 Elongation factor P (EF-P) OB domain ATY44_08920 PF09285 Elongation factor P, C-terminal ATY44_08925 PF00106 short chain dehydrogenase ATY44_08930 PF00682 HMGL-like ATY44_08940 PF00378 Enoyl-CoA hydratase/isomerase ATY44_08950 PF07664 Ferrous iron transport protein B C terminus ATY44_08950 PF07670 Nucleoside recognition ATY44_08950 PF02421 Ferrous iron transport protein B ATY44_08970 PF00155 Aminotransferase class I and II ATY44_08975 PF03475 3-alpha domain ATY44_08975 PF03473 MOSC domain ATY44_08980 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_08990 PF01113 Dihydrodipicolinate reductase, N-terminus ATY44_08990 PF05173 Dihydrodipicolinate reductase, C-terminus ATY44_08995 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ATY44_08995 PF00117 Glutamine amidotransferase class-I ATY44_09005 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ATY44_09005 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ATY44_09005 PF02142 MGS-like domain ATY44_09010 PF03449 Transcription elongation factor, N-terminal ATY44_09010 PF01272 Transcription elongation factor, GreA/GreB, C-term ATY44_09020 PF17768 RecJ OB domain ATY44_09020 PF02272 DHHA1 domain ATY44_09020 PF01368 DHH family ATY44_09045 PF13542 Helix-turn-helix domain of transposase family ISL3 ATY44_09045 PF01610 Transposase ATY44_09045 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 ATY44_09060 PF00472 RF-1 domain ATY44_09060 PF03462 PCRF domain ATY44_09065 PF00152 tRNA synthetases class II (D, K and N) ATY44_09065 PF01336 OB-fold nucleic acid binding domain ATY44_09070 PF00072 Response regulator receiver domain ATY44_09080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_09080 PF00512 His Kinase A (phospho-acceptor) domain ATY44_09080 PF01627 Hpt domain ATY44_09080 PF00072 Response regulator receiver domain ATY44_09085 PF00378 Enoyl-CoA hydratase/isomerase ATY44_09090 PF00501 AMP-binding enzyme ATY44_09090 PF13193 AMP-binding enzyme C-terminal domain ATY44_09100 PF00694 Aconitase C-terminal domain ATY44_09100 PF00330 Aconitase family (aconitate hydratase) ATY44_09115 PF11791 Aconitate B N-terminal domain ATY44_09115 PF06434 Aconitate hydratase 2 N-terminus ATY44_09115 PF00330 Aconitase family (aconitate hydratase) ATY44_09120 PF00561 alpha/beta hydrolase fold ATY44_09125 PF00990 Diguanylate cyclase, GGDEF domain ATY44_09125 PF03707 Bacterial signalling protein N terminal repeat ATY44_09125 PF00563 EAL domain ATY44_09130 PF00072 Response regulator receiver domain ATY44_09130 PF01339 CheB methylesterase ATY44_09135 PF03975 CheD chemotactic sensory transduction ATY44_09140 PF03705 CheR methyltransferase, all-alpha domain ATY44_09140 PF01739 CheR methyltransferase, SAM binding domain ATY44_09145 PF02203 Tar ligand binding domain homologue ATY44_09145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY44_09145 PF00672 HAMP domain ATY44_09165 PF01584 CheW-like domain ATY44_09170 PF07238 PilZ domain ATY44_09170 PF07317 Flagellar regulator YcgR ATY44_09175 PF00672 HAMP domain ATY44_09175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY44_09175 PF02203 Tar ligand binding domain homologue ATY44_09180 PF00672 HAMP domain ATY44_09180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY44_09180 PF02203 Tar ligand binding domain homologue ATY44_09185 PF02203 Tar ligand binding domain homologue ATY44_09185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY44_09185 PF00672 HAMP domain ATY44_09190 PF02203 Tar ligand binding domain homologue ATY44_09190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY44_09190 PF00672 HAMP domain ATY44_09195 PF02203 Tar ligand binding domain homologue ATY44_09195 PF00672 HAMP domain ATY44_09195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY44_09205 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_09215 PF02203 Tar ligand binding domain homologue ATY44_09215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY44_09215 PF00672 HAMP domain ATY44_09240 PF09078 CheY binding ATY44_09240 PF02895 Signal transducing histidine kinase, homodimeric domain ATY44_09240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_09240 PF01627 Hpt domain ATY44_09240 PF01584 CheW-like domain ATY44_09245 PF00072 Response regulator receiver domain ATY44_09255 PF01584 CheW-like domain ATY44_09260 PF13614 AAA domain ATY44_09265 PF13677 Membrane MotB of proton-channel complex MotA/MotB ATY44_09265 PF00691 OmpA family ATY44_09270 PF01618 MotA/TolQ/ExbB proton channel family ATY44_09290 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ATY44_09290 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ATY44_09300 PF07715 TonB-dependent Receptor Plug Domain ATY44_09300 PF00593 TonB dependent receptor ATY44_09330 PF05598 Transposase domain (DUF772) ATY44_09330 PF01609 Transposase DDE domain ATY44_09360 PF01609 Transposase DDE domain ATY44_09360 PF05598 Transposase domain (DUF772) ATY44_09375 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ATY44_09380 PF00294 pfkB family carbohydrate kinase ATY44_09385 PF00381 PTS HPr component phosphorylation site ATY44_09385 PF05524 PEP-utilising enzyme, N-terminal ATY44_09385 PF00391 PEP-utilising enzyme, mobile domain ATY44_09385 PF02896 PEP-utilising enzyme, TIM barrel domain ATY44_09385 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ATY44_09390 PF00356 Bacterial regulatory proteins, lacI family ATY44_09395 PF13006 Insertion element 4 transposase N-terminal ATY44_09395 PF01609 Transposase DDE domain ATY44_09410 PF00873 AcrB/AcrD/AcrF family ATY44_09415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ATY44_09415 PF00529 HlyD membrane-fusion protein of T1SS ATY44_09425 PF05088 Bacterial NAD-glutamate dehydrogenase ATY44_09430 PF01609 Transposase DDE domain ATY44_09430 PF05598 Transposase domain (DUF772) ATY44_09435 PF00072 Response regulator receiver domain ATY44_09440 PF00072 Response regulator receiver domain ATY44_09440 PF01627 Hpt domain ATY44_09440 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ATY44_09440 PF00512 His Kinase A (phospho-acceptor) domain ATY44_09440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_09440 PF00672 HAMP domain ATY44_09445 PF04286 Protein of unknown function (DUF445) ATY44_09455 PF00005 ABC transporter ATY44_09460 PF00202 Aminotransferase class-III ATY44_09470 PF07690 Major Facilitator Superfamily ATY44_09475 PF02634 FdhD/NarQ family ATY44_09480 PF00384 Molybdopterin oxidoreductase ATY44_09490 PF07690 Major Facilitator Superfamily ATY44_09490 PF00083 Sugar (and other) transporter ATY44_09495 PF00990 Diguanylate cyclase, GGDEF domain ATY44_09495 PF00072 Response regulator receiver domain ATY44_09500 PF01266 FAD dependent oxidoreductase ATY44_09505 PF00120 Glutamine synthetase, catalytic domain ATY44_09515 PF00120 Glutamine synthetase, catalytic domain ATY44_09525 PF13533 Biotin-lipoyl like ATY44_09530 PF07690 Major Facilitator Superfamily ATY44_09535 PF02321 Outer membrane efflux protein ATY44_09550 PF00528 Binding-protein-dependent transport system inner membrane component ATY44_09560 PF00171 Aldehyde dehydrogenase family ATY44_09575 PF00571 CBS domain ATY44_09575 PF03471 Transporter associated domain ATY44_09585 PF02130 Uncharacterized protein family UPF0054 ATY44_09595 PF02562 PhoH-like protein ATY44_09600 PF01938 TRAM domain ATY44_09600 PF04055 Radical SAM superfamily ATY44_09600 PF00919 Uncharacterized protein family UPF0004 ATY44_09620 PF01464 Transglycosylase SLT domain ATY44_09625 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ATY44_09625 PF00355 Rieske [2Fe-2S] domain ATY44_09630 PF00032 Cytochrome b(C-terminal)/b6/petD ATY44_09630 PF00033 Cytochrome b/b6/petB ATY44_09635 PF02167 Cytochrome C1 family ATY44_09640 PF02798 Glutathione S-transferase, N-terminal domain ATY44_09640 PF00043 Glutathione S-transferase, C-terminal domain ATY44_09645 PF04386 Stringent starvation protein B ATY44_09675 PF00872 Transposase, Mutator family ATY44_09680 PF01609 Transposase DDE domain ATY44_09680 PF05598 Transposase domain (DUF772) ATY44_09690 PF14850 DNA-binding domain of Proline dehydrogenase ATY44_09690 PF01619 Proline dehydrogenase ATY44_09690 PF00171 Aldehyde dehydrogenase family ATY44_09690 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ATY44_09730 PF00570 HRDC domain ATY44_09730 PF01612 3'-5' exonuclease ATY44_09735 PF03781 Sulfatase-modifying factor enzyme 1 ATY44_09750 PF02601 Exonuclease VII, large subunit ATY44_09750 PF13742 OB-fold nucleic acid binding domain ATY44_09755 PF08331 Domain of unknown function (DUF1730) ATY44_09760 PF03853 YjeF-related protein N-terminus ATY44_09760 PF01256 Carbohydrate kinase ATY44_09765 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ATY44_09770 PF11741 AMIN domain ATY44_09770 PF01520 N-acetylmuramoyl-L-alanine amidase ATY44_09775 PF08676 MutL C terminal dimerisation domain ATY44_09775 PF01119 DNA mismatch repair protein, C-terminal domain ATY44_09790 PF07879 PHB/PHA accumulation regulator DNA-binding domain ATY44_09790 PF05233 PHB accumulation regulatory domain ATY44_09795 PF00106 short chain dehydrogenase ATY44_09800 PF00749 tRNA synthetases class I (E and Q), catalytic domain ATY44_09805 PF01435 Peptidase family M48 ATY44_09810 PF00990 Diguanylate cyclase, GGDEF domain ATY44_09810 PF00072 Response regulator receiver domain ATY44_09810 PF00563 EAL domain ATY44_09820 PF07152 YaeQ protein ATY44_09825 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ATY44_09830 PF00313 'Cold-shock' DNA-binding domain ATY44_09835 PF02798 Glutathione S-transferase, N-terminal domain ATY44_09835 PF14497 Glutathione S-transferase, C-terminal domain ATY44_09845 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ATY44_09850 PF00156 Phosphoribosyl transferase domain ATY44_09855 PF03880 DbpA RNA binding domain ATY44_09855 PF00270 DEAD/DEAH box helicase ATY44_09855 PF00271 Helicase conserved C-terminal domain ATY44_09875 PF00545 ribonuclease ATY44_09880 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ATY44_09880 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ATY44_09885 PF00459 Inositol monophosphatase family ATY44_09890 PF00588 SpoU rRNA Methylase family ATY44_09900 PF03707 Bacterial signalling protein N terminal repeat ATY44_09900 PF13188 PAS domain ATY44_09900 PF00990 Diguanylate cyclase, GGDEF domain ATY44_09900 PF00563 EAL domain ATY44_09905 PF04055 Radical SAM superfamily ATY44_09910 PF09285 Elongation factor P, C-terminal ATY44_09910 PF08207 Elongation factor P (EF-P) KOW-like domain ATY44_09910 PF01132 Elongation factor P (EF-P) OB domain ATY44_09920 PF01979 Amidohydrolase family ATY44_09930 PF13419 Haloacid dehalogenase-like hydrolase ATY44_09940 PF00295 Glycosyl hydrolases family 28 ATY44_09955 PF01095 Pectinesterase ATY44_09975 PF01609 Transposase DDE domain ATY44_09975 PF05598 Transposase domain (DUF772) ATY44_09995 PF05985 Ethanolamine ammonia-lyase light chain (EutC) ATY44_10000 PF01551 Peptidase family M23 ATY44_10000 PF08460 Bacterial SH3 domain ATY44_10005 PF01979 Amidohydrolase family ATY44_10010 PF01809 Putative membrane protein insertion efficiency factor ATY44_10020 PF01258 Prokaryotic dksA/traR C4-type zinc finger ATY44_10035 PF02657 Fe-S metabolism associated domain ATY44_10040 PF01406 tRNA synthetases class I (C) catalytic domain ATY44_10040 PF09190 DALR domain ATY44_10050 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ATY44_10050 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ATY44_10055 PF00764 Arginosuccinate synthase ATY44_10065 PF07687 Peptidase dimerisation domain ATY44_10065 PF01546 Peptidase family M20/M25/M40 ATY44_10070 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase ATY44_10070 PF00696 Amino acid kinase family ATY44_10080 PF01118 Semialdehyde dehydrogenase, NAD binding domain ATY44_10085 PF00206 Lyase ATY44_10100 PF01472 PUA domain ATY44_10100 PF00696 Amino acid kinase family ATY44_10105 PF00171 Aldehyde dehydrogenase family ATY44_10110 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ATY44_10110 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ATY44_10130 PF02322 Cytochrome bd terminal oxidase subunit II ATY44_10135 PF01654 Cytochrome bd terminal oxidase subunit I ATY44_10140 PF01654 Cytochrome bd terminal oxidase subunit I ATY44_10145 PF00664 ABC transporter transmembrane region ATY44_10145 PF00005 ABC transporter ATY44_10150 PF00664 ABC transporter transmembrane region ATY44_10150 PF00005 ABC transporter ATY44_10165 PF05598 Transposase domain (DUF772) ATY44_10205 PF00034 Cytochrome c ATY44_10220 PF00873 AcrB/AcrD/AcrF family ATY44_10225 PF00873 AcrB/AcrD/AcrF family ATY44_10280 PF13936 Helix-turn-helix domain ATY44_10280 PF00665 Integrase core domain ATY44_10295 PF01584 CheW-like domain ATY44_10295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_10295 PF02895 Signal transducing histidine kinase, homodimeric domain ATY44_10295 PF07194 P2 response regulator binding domain ATY44_10295 PF01627 Hpt domain ATY44_10300 PF04344 Chemotaxis phosphatase, CheZ ATY44_10305 PF00072 Response regulator receiver domain ATY44_10310 PF04542 Sigma-70 region 2 ATY44_10310 PF04539 Sigma-70 region 3 ATY44_10310 PF04545 Sigma-70, region 4 ATY44_10315 PF10609 NUBPL iron-transfer P-loop NTPase ATY44_10320 PF00448 SRP54-type protein, GTPase domain ATY44_10325 PF00771 FHIPEP family ATY44_10330 PF01312 FlhB HrpN YscU SpaS Family ATY44_10335 PF03707 Bacterial signalling protein N terminal repeat ATY44_10335 PF00990 Diguanylate cyclase, GGDEF domain ATY44_10335 PF00563 EAL domain ATY44_10340 PF00990 Diguanylate cyclase, GGDEF domain ATY44_10340 PF00563 EAL domain ATY44_10340 PF03707 Bacterial signalling protein N terminal repeat ATY44_10340 PF13188 PAS domain ATY44_10345 PF00990 Diguanylate cyclase, GGDEF domain ATY44_10345 PF00563 EAL domain ATY44_10345 PF03707 Bacterial signalling protein N terminal repeat ATY44_10345 PF13188 PAS domain ATY44_10350 PF01311 Bacterial export proteins, family 1 ATY44_10355 PF01313 Bacterial export proteins, family 3 ATY44_10360 PF00813 FliP family ATY44_10365 PF04347 Flagellar biosynthesis protein, FliO ATY44_10370 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ATY44_10375 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ATY44_10375 PF02154 Flagellar motor switch protein FliM ATY44_10395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATY44_10395 PF18269 T3SS EscN ATPase C-terminal domain ATY44_10405 PF14841 FliG middle domain ATY44_10405 PF01706 FliG C-terminal domain ATY44_10405 PF14842 FliG N-terminal domain ATY44_10410 PF08345 Flagellar M-ring protein C-terminal ATY44_10410 PF01514 Secretory protein of YscJ/FliF family ATY44_10415 PF02049 Flagellar hook-basal body complex protein FliE ATY44_10420 PF00535 Glycosyl transferase family 2 ATY44_10420 PF00534 Glycosyl transferases group 1 ATY44_10460 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ATY44_10460 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ATY44_10470 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ATY44_10475 PF02954 Bacterial regulatory protein, Fis family ATY44_10475 PF00072 Response regulator receiver domain ATY44_10475 PF00158 Sigma-54 interaction domain ATY44_10480 PF01339 CheB methylesterase ATY44_10480 PF00072 Response regulator receiver domain ATY44_10485 PF00309 Sigma-54 factor, Activator interacting domain (AID) ATY44_10485 PF04963 Sigma-54 factor, core binding domain ATY44_10485 PF04552 Sigma-54, DNA binding domain ATY44_10490 PF00196 Bacterial regulatory proteins, luxR family ATY44_10490 PF00072 Response regulator receiver domain ATY44_10505 PF02561 Flagellar protein FliS ATY44_10510 PF07196 Flagellin hook IN motif ATY44_10510 PF07195 Flagellar hook-associated protein 2 C-terminus ATY44_10510 PF02465 Flagellar hook-associated protein 2 N-terminus ATY44_10515 PF00669 Bacterial flagellin N-terminal helical region ATY44_10515 PF00700 Bacterial flagellin C-terminal helical region ATY44_10525 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATY44_10525 PF07196 Flagellin hook IN motif ATY44_10530 PF10135 Rod binding protein ATY44_10530 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ATY44_10535 PF02119 Flagellar P-ring protein ATY44_10540 PF02107 Flagellar L-ring protein ATY44_10545 PF00460 Flagella basal body rod protein ATY44_10545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATY44_10555 PF00460 Flagella basal body rod protein ATY44_10555 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATY44_10560 PF00460 Flagella basal body rod protein ATY44_10560 PF07559 Flagellar basal body protein FlaE ATY44_10560 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATY44_10565 PF03963 Flagellar hook capping protein - N-terminal region ATY44_10570 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATY44_10570 PF00460 Flagella basal body rod protein ATY44_10580 PF00072 Response regulator receiver domain ATY44_10580 PF01584 CheW-like domain ATY44_10600 PF00989 PAS fold ATY44_10600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_10600 PF13188 PAS domain ATY44_10600 PF00512 His Kinase A (phospho-acceptor) domain ATY44_10600 PF13426 PAS domain ATY44_10605 PF03707 Bacterial signalling protein N terminal repeat ATY44_10605 PF00990 Diguanylate cyclase, GGDEF domain ATY44_10605 PF00563 EAL domain ATY44_10610 PF07730 Histidine kinase ATY44_10610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_10615 PF00990 Diguanylate cyclase, GGDEF domain ATY44_10615 PF08447 PAS fold ATY44_10615 PF00563 EAL domain ATY44_10615 PF08448 PAS fold ATY44_10630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY44_10630 PF12729 Four helix bundle sensory module for signal transduction ATY44_10630 PF00672 HAMP domain ATY44_10635 PF04356 Protein of unknown function (DUF489) ATY44_10645 PF00293 NUDIX domain ATY44_10650 PF02617 ATP-dependent Clp protease adaptor protein ClpS ATY44_10655 PF02861 Clp amino terminal domain, pathogenicity island component ATY44_10655 PF10431 C-terminal, D2-small domain, of ClpB protein ATY44_10655 PF07724 AAA domain (Cdc48 subfamily) ATY44_10655 PF00004 ATPase family associated with various cellular activities (AAA) ATY44_10655 PF17871 AAA lid domain ATY44_10660 PF01176 Translation initiation factor 1A / IF-1 ATY44_10665 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ATY44_10685 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY44_10690 PF17854 FtsK alpha domain ATY44_10690 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ATY44_10690 PF09397 Ftsk gamma domain ATY44_10690 PF01580 FtsK/SpoIIIE family ATY44_10700 PF03548 Outer membrane lipoprotein carrier protein LolA ATY44_10710 PF00004 ATPase family associated with various cellular activities (AAA) ATY44_10710 PF12002 MgsA AAA+ ATPase C terminal ATY44_10710 PF16193 AAA C-terminal domain ATY44_10720 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ATY44_10730 PF00654 Voltage gated chloride channel ATY44_10735 PF00108 Thiolase, N-terminal domain ATY44_10735 PF02803 Thiolase, C-terminal domain ATY44_10740 PF00378 Enoyl-CoA hydratase/isomerase ATY44_10740 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ATY44_10740 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ATY44_10750 PF00334 Nucleoside diphosphate kinase ATY44_10755 PF04055 Radical SAM superfamily ATY44_10765 PF13464 Domain of unknown function (DUF4115) ATY44_10775 PF01011 PQQ enzyme repeat ATY44_10775 PF13360 PQQ-like domain ATY44_10780 PF01926 50S ribosome-binding GTPase ATY44_10780 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ATY44_10785 PF00994 Probable molybdopterin binding domain ATY44_10785 PF03454 MoeA C-terminal region (domain IV) ATY44_10785 PF03453 MoeA N-terminal region (domain I and II) ATY44_10820 PF00665 Integrase core domain ATY44_10820 PF13936 Helix-turn-helix domain ATY44_10840 PF05598 Transposase domain (DUF772) ATY44_10855 PF00899 ThiF family ATY44_10865 PF05598 Transposase domain (DUF772) ATY44_10865 PF01609 Transposase DDE domain ATY44_10890 PF03079 ARD/ARD' family ATY44_10895 PF00596 Class II Aldolase and Adducin N-terminal domain ATY44_10900 PF13520 Amino acid permease ATY44_10905 PF13520 Amino acid permease ATY44_10915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATY44_10915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ATY44_10920 PF02913 FAD linked oxidases, C-terminal domain ATY44_10920 PF01565 FAD binding domain ATY44_10945 PF03918 Cytochrome C biogenesis protein ATY44_10950 PF08534 Redoxin ATY44_10955 PF01578 Cytochrome C assembly protein ATY44_10955 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ATY44_10960 PF03100 CcmE ATY44_10970 PF01578 Cytochrome C assembly protein ATY44_10975 PF03379 CcmB protein ATY44_10980 PF00005 ABC transporter ATY44_10985 PF00155 Aminotransferase class I and II ATY44_10990 PF00795 Carbon-nitrogen hydrolase ATY44_11010 PF01479 S4 domain ATY44_11010 PF00849 RNA pseudouridylate synthase ATY44_11015 PF04079 Segregation and condensation complex subunit ScpB ATY44_11020 PF02616 Segregation and condensation protein ScpA ATY44_11025 PF03795 YCII-related domain ATY44_11035 PF00356 Bacterial regulatory proteins, lacI family ATY44_11055 PF00528 Binding-protein-dependent transport system inner membrane component ATY44_11060 PF00528 Binding-protein-dependent transport system inner membrane component ATY44_11085 PF00795 Carbon-nitrogen hydrolase ATY44_11090 PF04371 Porphyromonas-type peptidyl-arginine deiminase ATY44_11100 PF00444 Ribosomal protein L36 ATY44_11105 PF02224 Cytidylate kinase ATY44_11110 PF00575 S1 RNA binding domain ATY44_11115 PF00216 Bacterial DNA-binding protein ATY44_11125 PF18073 Rubredoxin metal binding domain ATY44_11130 PF00953 Glycosyl transferase family 4 ATY44_11135 PF02719 Polysaccharide biosynthesis protein ATY44_11140 PF00483 Nucleotidyl transferase ATY44_11145 PF02254 TrkA-N domain ATY44_11145 PF00999 Sodium/hydrogen exchanger family ATY44_11180 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ATY44_11180 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ATY44_11185 PF00478 IMP dehydrogenase / GMP reductase domain ATY44_11185 PF00571 CBS domain ATY44_11190 PF00958 GMP synthase C terminal domain ATY44_11190 PF02540 NAD synthase ATY44_11190 PF00117 Glutamine amidotransferase class-I ATY44_11195 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) ATY44_11200 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus ATY44_11200 PF00361 Proton-conducting membrane transporter ATY44_11200 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ATY44_11205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY44_11205 PF03466 LysR substrate binding domain ATY44_11220 PF03601 Conserved hypothetical protein 698 ATY44_11225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY44_11225 PF03466 LysR substrate binding domain ATY44_11230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY44_11230 PF03466 LysR substrate binding domain ATY44_11245 PF01566 Natural resistance-associated macrophage protein ATY44_11250 PF02742 Iron dependent repressor, metal binding and dimerisation domain ATY44_11250 PF01325 Iron dependent repressor, N-terminal DNA binding domain ATY44_11255 PF14437 MafB19-like deaminase ATY44_11260 PF00929 Exonuclease ATY44_11265 PF05552 Conserved TM helix ATY44_11265 PF00924 Mechanosensitive ion channel ATY44_11270 PF02896 PEP-utilising enzyme, TIM barrel domain ATY44_11270 PF00391 PEP-utilising enzyme, mobile domain ATY44_11270 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ATY44_11275 PF03618 Kinase/pyrophosphorylase ATY44_11295 PF01066 CDP-alcohol phosphatidyltransferase ATY44_11305 PF00561 alpha/beta hydrolase fold ATY44_11320 PF01266 FAD dependent oxidoreductase ATY44_11320 PF00355 Rieske [2Fe-2S] domain ATY44_11330 PF16921 Tex protein YqgF-like domain ATY44_11330 PF09371 Tex-like protein N-terminal domain ATY44_11330 PF00575 S1 RNA binding domain ATY44_11330 PF17674 HHH domain ATY44_11340 PF00072 Response regulator receiver domain ATY44_11350 PF04551 GcpE protein ATY44_11355 PF01569 PAP2 superfamily ATY44_11360 PF07690 Major Facilitator Superfamily ATY44_11370 PF01177 Asp/Glu/Hydantoin racemase ATY44_11375 PF00892 EamA-like transporter family ATY44_11380 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ATY44_11380 PF01565 FAD binding domain ATY44_11385 PF01180 Dihydroorotate dehydrogenase ATY44_11400 PF00171 Aldehyde dehydrogenase family ATY44_11415 PF01842 ACT domain ATY44_11415 PF13840 ACT domain ATY44_11415 PF03447 Homoserine dehydrogenase, NAD binding domain ATY44_11415 PF00742 Homoserine dehydrogenase ATY44_11415 PF00696 Amino acid kinase family ATY44_11420 PF08544 GHMP kinases C terminal ATY44_11420 PF00288 GHMP kinases N terminal domain ATY44_11435 PF00291 Pyridoxal-phosphate dependent enzyme ATY44_11435 PF14821 Threonine synthase N terminus ATY44_11450 PF13393 Histidyl-tRNA synthetase ATY44_11450 PF03129 Anticodon binding domain ATY44_11470 PF08029 HisG, C-terminal domain ATY44_11470 PF01634 ATP phosphoribosyltransferase ATY44_11475 PF00815 Histidinol dehydrogenase ATY44_11480 PF00155 Aminotransferase class I and II ATY44_11485 PF00475 Imidazoleglycerol-phosphate dehydratase ATY44_11490 PF00117 Glutamine amidotransferase class-I ATY44_11495 PF00977 Histidine biosynthesis protein ATY44_11500 PF00977 Histidine biosynthesis protein ATY44_11505 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ATY44_11505 PF01502 Phosphoribosyl-AMP cyclohydrolase ATY44_11515 PF03377 TAL effector repeat ATY44_11530 PF03377 TAL effector repeat ATY44_11575 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_11600 PF03377 TAL effector repeat ATY44_11620 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_11640 PF03377 TAL effector repeat ATY44_11685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ATY44_11705 PF01066 CDP-alcohol phosphatidyltransferase ATY44_11710 PF02151 UvrB/uvrC motif ATY44_11710 PF01541 GIY-YIG catalytic domain ATY44_11710 PF08459 UvrC Helix-hairpin-helix N-terminal ATY44_11720 PF01451 Low molecular weight phosphotyrosine protein phosphatase ATY44_11725 PF02348 Cytidylyltransferase ATY44_11730 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ATY44_11735 PF00664 ABC transporter transmembrane region ATY44_11735 PF00005 ABC transporter ATY44_11745 PF01618 MotA/TolQ/ExbB proton channel family ATY44_11750 PF03772 Competence protein ATY44_11750 PF00753 Metallo-beta-lactamase superfamily ATY44_11765 PF00005 ABC transporter ATY44_11770 PF12704 MacB-like periplasmic core domain ATY44_11770 PF02687 FtsX-like permease family ATY44_11780 PF03937 Flavinator of succinate dehydrogenase ATY44_11785 PF13085 2Fe-2S iron-sulfur cluster binding domain ATY44_11795 PF02910 Fumarate reductase flavoprotein C-term ATY44_11795 PF00890 FAD binding domain ATY44_11800 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ATY44_11805 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ATY44_11810 PF01571 Aminomethyltransferase folate-binding domain ATY44_11815 PF17912 MalK OB fold domain ATY44_11815 PF00005 ABC transporter ATY44_11820 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ATY44_11820 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ATY44_11825 PF02685 Glucokinase ATY44_11830 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ATY44_11835 PF00920 Dehydratase family ATY44_11840 PF01081 KDPG and KHG aldolase ATY44_11845 PF05598 Transposase domain (DUF772) ATY44_11855 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_11880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_11880 PF01627 Hpt domain ATY44_11880 PF00512 His Kinase A (phospho-acceptor) domain ATY44_11880 PF00072 Response regulator receiver domain ATY44_11880 PF00672 HAMP domain ATY44_11880 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ATY44_11890 PF01526 Tn3 transposase DDE domain ATY44_11890 PF13700 Domain of unknown function (DUF4158) ATY44_11900 PF00581 Rhodanese-like domain ATY44_11905 PF02040 Arsenical pump membrane protein ATY44_11910 PF03358 NADPH-dependent FMN reductase ATY44_11915 PF03960 ArsC family ATY44_11935 PF13175 AAA ATPase domain ATY44_11960 PF00004 ATPase family associated with various cellular activities (AAA) ATY44_11960 PF17862 AAA+ lid domain ATY44_11960 PF06480 FtsH Extracellular ATY44_11960 PF01434 Peptidase family M41 ATY44_11975 PF05598 Transposase domain (DUF772) ATY44_11995 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_12015 PF00990 Diguanylate cyclase, GGDEF domain ATY44_12015 PF08448 PAS fold ATY44_12045 PF02253 Phospholipase A1 ATY44_12055 PF05683 Fumarase C-terminus ATY44_12055 PF05681 Fumarate hydratase (Fumerase) ATY44_12060 PF00005 ABC transporter ATY44_12065 PF00175 Oxidoreductase NAD-binding domain ATY44_12065 PF00970 Oxidoreductase FAD-binding domain ATY44_12070 PF00255 Glutathione peroxidase ATY44_12090 PF00082 Subtilase family ATY44_12095 PF04542 Sigma-70 region 2 ATY44_12095 PF08281 Sigma-70, region 4 ATY44_12105 PF12802 MarR family ATY44_12130 PF00854 POT family ATY44_12140 PF14310 Fibronectin type III-like domain ATY44_12140 PF00933 Glycosyl hydrolase family 3 N terminal domain ATY44_12140 PF01915 Glycosyl hydrolase family 3 C-terminal domain ATY44_12155 PF00990 Diguanylate cyclase, GGDEF domain ATY44_12155 PF00563 EAL domain ATY44_12155 PF00360 Phytochrome region ATY44_12155 PF01590 GAF domain ATY44_12160 PF00474 Sodium:solute symporter family ATY44_12165 PF14310 Fibronectin type III-like domain ATY44_12165 PF01915 Glycosyl hydrolase family 3 C-terminal domain ATY44_12165 PF00933 Glycosyl hydrolase family 3 N terminal domain ATY44_12185 PF00342 Phosphoglucose isomerase ATY44_12190 PF02261 Aspartate decarboxylase ATY44_12195 PF02569 Pantoate-beta-alanine ligase ATY44_12200 PF02548 Ketopantoate hydroxymethyltransferase ATY44_12205 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ATY44_12220 PF02649 Type I GTP cyclohydrolase folE2 ATY44_12225 PF01520 N-acetylmuramoyl-L-alanine amidase ATY44_12240 PF05598 Transposase domain (DUF772) ATY44_12245 PF00082 Subtilase family ATY44_12245 PF03797 Autotransporter beta-domain ATY44_12250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ATY44_12255 PF00873 AcrB/AcrD/AcrF family ATY44_12260 PF02321 Outer membrane efflux protein ATY44_12265 PF08448 PAS fold ATY44_12265 PF13426 PAS domain ATY44_12265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_12265 PF00072 Response regulator receiver domain ATY44_12265 PF00512 His Kinase A (phospho-acceptor) domain ATY44_12270 PF00196 Bacterial regulatory proteins, luxR family ATY44_12270 PF00072 Response regulator receiver domain ATY44_12275 PF12951 Passenger-associated-transport-repeat ATY44_12280 PF05598 Transposase domain (DUF772) ATY44_12285 PF01527 Transposase ATY44_12295 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ATY44_12300 PF01842 ACT domain ATY44_12300 PF00800 Prephenate dehydratase ATY44_12300 PF01817 Chorismate mutase type II ATY44_12305 PF00266 Aminotransferase class-V ATY44_12310 PF00174 Oxidoreductase molybdopterin binding domain ATY44_12320 PF01794 Ferric reductase like transmembrane component ATY44_12345 PF00392 Bacterial regulatory proteins, gntR family ATY44_12345 PF07702 UTRA domain ATY44_12355 PF07969 Amidohydrolase family ATY44_12360 PF00221 Aromatic amino acid lyase ATY44_12370 PF01175 Urocanase Rossmann-like domain ATY44_12370 PF17392 Urocanase C-terminal domain ATY44_12370 PF17391 Urocanase N-terminal domain ATY44_12385 PF13276 HTH-like domain ATY44_12390 PF01527 Transposase ATY44_12395 PF03989 DNA gyrase C-terminal domain, beta-propeller ATY44_12395 PF00521 DNA gyrase/topoisomerase IV, subunit A ATY44_12400 PF01008 Initiation factor 2 subunit family ATY44_12410 PF00152 tRNA synthetases class II (D, K and N) ATY44_12415 PF00533 BRCA1 C Terminus (BRCT) domain ATY44_12415 PF01653 NAD-dependent DNA ligase adenylation domain ATY44_12415 PF03120 NAD-dependent DNA ligase OB-fold domain ATY44_12415 PF12826 Helix-hairpin-helix motif ATY44_12415 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ATY44_12425 PF04354 ZipA, C-terminal FtsZ-binding domain ATY44_12430 PF02463 RecF/RecN/SMC N terminal domain ATY44_12435 PF01281 Ribosomal protein L9, N-terminal domain ATY44_12435 PF03948 Ribosomal protein L9, C-terminal domain ATY44_12440 PF01084 Ribosomal protein S18 ATY44_12445 PF01250 Ribosomal protein S6 ATY44_12450 PF01521 Iron-sulphur cluster biosynthesis ATY44_12455 PF01336 OB-fold nucleic acid binding domain ATY44_12455 PF00152 tRNA synthetases class II (D, K and N) ATY44_12485 PF00484 Carbonic anhydrase ATY44_12490 PF06052 3-hydroxyanthranilic acid dioxygenase ATY44_12500 PF00266 Aminotransferase class-V ATY44_12505 PF01494 FAD binding domain ATY44_12510 PF08411 Exonuclease C-terminal ATY44_12510 PF00929 Exonuclease ATY44_12520 PF00248 Aldo/keto reductase family ATY44_12535 PF01513 ATP-NAD kinase ATY44_12540 PF10672 S-adenosylmethionine-dependent methyltransferase ATY44_12540 PF02926 THUMP domain ATY44_12540 PF01170 Putative RNA methylase family UPF0020 ATY44_12575 PF00581 Rhodanese-like domain ATY44_12580 PF00293 NUDIX domain ATY44_12585 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ATY44_12585 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATY44_12590 PF00378 Enoyl-CoA hydratase/isomerase ATY44_12600 PF00730 HhH-GPD superfamily base excision DNA repair protein ATY44_12600 PF00633 Helix-hairpin-helix motif ATY44_12600 PF10576 Iron-sulfur binding domain of endonuclease III ATY44_12610 PF00484 Carbonic anhydrase ATY44_12620 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_12635 PF12849 PBP superfamily domain ATY44_12640 PF12849 PBP superfamily domain ATY44_12645 PF00528 Binding-protein-dependent transport system inner membrane component ATY44_12650 PF00528 Binding-protein-dependent transport system inner membrane component ATY44_12655 PF00005 ABC transporter ATY44_12660 PF01895 PhoU domain ATY44_12670 PF00929 Exonuclease ATY44_12715 PF13495 Phage integrase, N-terminal SAM-like domain ATY44_12715 PF00589 Phage integrase family ATY44_12720 PF07549 SecD/SecF GG Motif ATY44_12720 PF02355 Protein export membrane protein ATY44_12725 PF07549 SecD/SecF GG Motif ATY44_12725 PF13721 SecD export protein N-terminal TM region ATY44_12725 PF02355 Protein export membrane protein ATY44_12730 PF02699 Preprotein translocase subunit ATY44_12735 PF01702 Queuine tRNA-ribosyltransferase ATY44_12740 PF02547 Queuosine biosynthesis protein ATY44_12775 PF05598 Transposase domain (DUF772) ATY44_12780 PF01609 Transposase DDE domain ATY44_12780 PF05598 Transposase domain (DUF772) ATY44_12785 PF05598 Transposase domain (DUF772) ATY44_12820 PF04717 Type VI secretion system, phage-baseplate injector ATY44_12820 PF16671 Actin cross-linking domain ATY44_12830 PF13333 Integrase core domain ATY44_12830 PF00665 Integrase core domain ATY44_12830 PF13276 HTH-like domain ATY44_12840 PF16671 Actin cross-linking domain ATY44_12840 PF04717 Type VI secretion system, phage-baseplate injector ATY44_12895 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_12915 PF00037 4Fe-4S binding domain ATY44_12930 PF01467 Cytidylyltransferase-like ATY44_12940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_12940 PF00183 Hsp90 protein ATY44_12955 PF03377 TAL effector repeat ATY44_12975 PF03377 TAL effector repeat ATY44_12990 PF03377 TAL effector repeat ATY44_13005 PF03466 LysR substrate binding domain ATY44_13005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY44_13010 PF02525 Flavodoxin-like fold ATY44_13015 PF05598 Transposase domain (DUF772) ATY44_13015 PF01609 Transposase DDE domain ATY44_13025 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ATY44_13025 PF02403 Seryl-tRNA synthetase N-terminal domain ATY44_13030 PF03544 Gram-negative bacterial TonB protein C-terminal ATY44_13040 PF01527 Transposase ATY44_13045 PF13276 HTH-like domain ATY44_13045 PF13683 Integrase core domain ATY44_13050 PF05598 Transposase domain (DUF772) ATY44_13080 PF00561 alpha/beta hydrolase fold ATY44_13085 PF00313 'Cold-shock' DNA-binding domain ATY44_13155 PF00589 Phage integrase family ATY44_13155 PF13495 Phage integrase, N-terminal SAM-like domain ATY44_13160 PF07549 SecD/SecF GG Motif ATY44_13160 PF02355 Protein export membrane protein ATY44_13165 PF07549 SecD/SecF GG Motif ATY44_13165 PF13721 SecD export protein N-terminal TM region ATY44_13165 PF02355 Protein export membrane protein ATY44_13170 PF02699 Preprotein translocase subunit ATY44_13175 PF01702 Queuine tRNA-ribosyltransferase ATY44_13225 PF00561 alpha/beta hydrolase fold ATY44_13230 PF00313 'Cold-shock' DNA-binding domain ATY44_13280 PF05598 Transposase domain (DUF772) ATY44_13280 PF01609 Transposase DDE domain ATY44_13290 PF00588 SpoU rRNA Methylase family ATY44_13290 PF08032 RNA 2'-O ribose methyltransferase substrate binding ATY44_13300 PF08461 Ribonuclease R winged-helix domain ATY44_13300 PF00575 S1 RNA binding domain ATY44_13300 PF08206 Ribonuclease B OB domain ATY44_13300 PF00773 RNB domain ATY44_13300 PF17876 Cold shock domain ATY44_13320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATY44_13320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATY44_13320 PF02770 Acyl-CoA dehydrogenase, middle domain ATY44_13325 PF01209 ubiE/COQ5 methyltransferase family ATY44_13330 PF00809 Pterin binding enzyme ATY44_13330 PF02574 Homocysteine S-methyltransferase ATY44_13335 PF02310 B12 binding domain ATY44_13335 PF02607 B12 binding domain ATY44_13335 PF02965 Vitamin B12 dependent methionine synthase, activation domain ATY44_13335 PF00809 Pterin binding enzyme ATY44_13335 PF02574 Homocysteine S-methyltransferase ATY44_13345 PF00294 pfkB family carbohydrate kinase ATY44_13350 PF07690 Major Facilitator Superfamily ATY44_13370 PF04102 SlyX ATY44_13375 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ATY44_13375 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ATY44_13375 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ATY44_13380 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATY44_13380 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ATY44_13385 PF00255 Glutathione peroxidase ATY44_13390 PF00392 Bacterial regulatory proteins, gntR family ATY44_13395 PF00005 ABC transporter ATY44_13425 PF00206 Lyase ATY44_13425 PF10415 Fumarase C C-terminus ATY44_13435 PF00665 Integrase core domain ATY44_13435 PF13936 Helix-turn-helix domain ATY44_13445 PF00665 Integrase core domain ATY44_13445 PF13936 Helix-turn-helix domain ATY44_13455 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_13475 PF08328 Adenylosuccinate lyase C-terminal ATY44_13475 PF00206 Lyase ATY44_13495 PF08007 Cupin superfamily protein ATY44_13505 PF02779 Transketolase, pyrimidine binding domain ATY44_13505 PF16078 2-oxoglutarate dehydrogenase N-terminus ATY44_13505 PF00676 Dehydrogenase E1 component ATY44_13505 PF16870 2-oxoglutarate dehydrogenase C-terminal ATY44_13510 PF00364 Biotin-requiring enzyme ATY44_13510 PF02817 e3 binding domain ATY44_13510 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ATY44_13515 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY44_13515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ATY44_13520 PF03641 Possible lysine decarboxylase ATY44_13525 PF01205 Uncharacterized protein family UPF0029 ATY44_13530 PF00664 ABC transporter transmembrane region ATY44_13530 PF00005 ABC transporter ATY44_13535 PF03466 LysR substrate binding domain ATY44_13535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY44_13550 PF01817 Chorismate mutase type II ATY44_13550 PF02153 Prephenate dehydrogenase ATY44_13555 PF08543 Phosphomethylpyrimidine kinase ATY44_13560 PF00684 DnaJ central domain ATY44_13560 PF01556 DnaJ C terminal domain ATY44_13560 PF00226 DnaJ domain ATY44_13565 PF00012 Hsp70 protein ATY44_13570 PF01025 GrpE ATY44_13575 PF01628 HrcA protein C terminal domain ATY44_13575 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding ATY44_13580 PF02463 RecF/RecN/SMC N terminal domain ATY44_13585 PF01475 Ferric uptake regulator family ATY44_13590 PF04355 SmpA / OmlA family ATY44_13595 PF03658 RnfH family Ubiquitin ATY44_13600 PF03364 Polyketide cyclase / dehydrase and lipid transport ATY44_13605 PF01668 SmpB protein ATY44_13625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATY44_13625 PF02770 Acyl-CoA dehydrogenase, middle domain ATY44_13625 PF12806 Acetyl-CoA dehydrogenase C-terminal like ATY44_13625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATY44_13635 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ATY44_13635 PF02779 Transketolase, pyrimidine binding domain ATY44_13635 PF02780 Transketolase, C-terminal domain ATY44_13655 PF00665 Integrase core domain ATY44_13655 PF13936 Helix-turn-helix domain ATY44_13675 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_13690 PF07690 Major Facilitator Superfamily ATY44_13695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ATY44_13695 PF00529 HlyD membrane-fusion protein of T1SS ATY44_13700 PF02321 Outer membrane efflux protein ATY44_13710 PF12833 Helix-turn-helix domain ATY44_13715 PF00521 DNA gyrase/topoisomerase IV, subunit A ATY44_13715 PF03989 DNA gyrase C-terminal domain, beta-propeller ATY44_13720 PF00210 Ferritin-like domain ATY44_13725 PF01804 Penicillin amidase ATY44_13740 PF07715 TonB-dependent Receptor Plug Domain ATY44_13740 PF00593 TonB dependent receptor ATY44_13755 PF13537 Glutamine amidotransferase domain ATY44_13755 PF00733 Asparagine synthase ATY44_13760 PF07687 Peptidase dimerisation domain ATY44_13760 PF01546 Peptidase family M20/M25/M40 ATY44_13770 PF03960 ArsC family ATY44_13780 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ATY44_13780 PF14602 Hexapeptide repeat of succinyl-transferase ATY44_13780 PF00132 Bacterial transferase hexapeptide (six repeats) ATY44_13785 PF01909 Nucleotidyltransferase domain ATY44_13785 PF08335 GlnD PII-uridylyltransferase ATY44_13785 PF01966 HD domain ATY44_13790 PF00557 Metallopeptidase family M24 ATY44_13825 PF00318 Ribosomal protein S2 ATY44_13830 PF00889 Elongation factor TS ATY44_13840 PF00696 Amino acid kinase family ATY44_13845 PF01765 Ribosome recycling factor ATY44_13850 PF01255 Putative undecaprenyl diphosphate synthase ATY44_13860 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ATY44_13860 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ATY44_13860 PF13288 DXP reductoisomerase C-terminal domain ATY44_13865 PF17820 PDZ domain ATY44_13865 PF02163 Peptidase family M50 ATY44_13870 PF01103 Surface antigen ATY44_13870 PF07244 Surface antigen variable number repeat ATY44_13875 PF00132 Bacterial transferase hexapeptide (six repeats) ATY44_13875 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ATY44_13880 PF07977 FabA-like domain ATY44_13885 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ATY44_13885 PF00132 Bacterial transferase hexapeptide (six repeats) ATY44_13890 PF02684 Lipid-A-disaccharide synthetase ATY44_13895 PF01351 Ribonuclease HII ATY44_13900 PF02811 PHP domain ATY44_13900 PF07733 Bacterial DNA polymerase III alpha NTPase domain ATY44_13900 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ATY44_13900 PF01336 OB-fold nucleic acid binding domain ATY44_13900 PF14579 Helix-hairpin-helix motif ATY44_13905 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ATY44_13915 PF07715 TonB-dependent Receptor Plug Domain ATY44_13915 PF00593 TonB dependent receptor ATY44_13920 PF00005 ABC transporter ATY44_13920 PF13732 Domain of unknown function (DUF4162) ATY44_13940 PF05598 Transposase domain (DUF772) ATY44_13945 PF05598 Transposase domain (DUF772) ATY44_14005 PF05598 Transposase domain (DUF772) ATY44_14020 PF02592 Putative vitamin uptake transporter ATY44_14035 PF02574 Homocysteine S-methyltransferase ATY44_14040 PF00324 Amino acid permease ATY44_14060 PF09334 tRNA synthetases class I (M) ATY44_14060 PF01588 Putative tRNA binding domain ATY44_14070 PF04060 Putative Fe-S cluster ATY44_14090 PF04545 Sigma-70, region 4 ATY44_14090 PF04542 Sigma-70 region 2 ATY44_14135 PF01042 Endoribonuclease L-PSP ATY44_14145 PF03706 Lysylphosphatidylglycerol synthase TM region ATY44_14145 PF09924 Uncharacterised conserved protein (DUF2156) ATY44_14175 PF07690 Major Facilitator Superfamily ATY44_14180 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ATY44_14190 PF03831 PhnA domain ATY44_14190 PF08274 PhnA Zinc-Ribbon ATY44_14205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATY44_14240 PF05598 Transposase domain (DUF772) ATY44_14240 PF01609 Transposase DDE domain ATY44_14245 PF01258 Prokaryotic dksA/traR C4-type zinc finger ATY44_14260 PF01863 Protein of unknown function DUF45 ATY44_14265 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ATY44_14265 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ATY44_14270 PF00082 Subtilase family ATY44_14270 PF12951 Passenger-associated-transport-repeat ATY44_14270 PF03797 Autotransporter beta-domain ATY44_14275 PF00108 Thiolase, N-terminal domain ATY44_14275 PF02803 Thiolase, C-terminal domain ATY44_14290 PF00990 Diguanylate cyclase, GGDEF domain ATY44_14290 PF00072 Response regulator receiver domain ATY44_14305 PF04675 DNA ligase N terminus ATY44_14305 PF01068 ATP dependent DNA ligase domain ATY44_14305 PF04679 ATP dependent DNA ligase C terminal region ATY44_14315 PF04675 DNA ligase N terminus ATY44_14315 PF04679 ATP dependent DNA ligase C terminal region ATY44_14315 PF01068 ATP dependent DNA ligase domain ATY44_14320 PF08494 DEAD/H associated ATY44_14320 PF00270 DEAD/DEAH box helicase ATY44_14320 PF00271 Helicase conserved C-terminal domain ATY44_14335 PF01494 FAD binding domain ATY44_14340 PF00313 'Cold-shock' DNA-binding domain ATY44_14345 PF01048 Phosphorylase superfamily ATY44_14355 PF00933 Glycosyl hydrolase family 3 N terminal domain ATY44_14360 PF04244 Deoxyribodipyrimidine photo-lyase-related protein ATY44_14365 PF01593 Flavin containing amine oxidoreductase ATY44_14370 PF01323 DSBA-like thioredoxin domain ATY44_14385 PF05598 Transposase domain (DUF772) ATY44_14400 PF05958 tRNA (Uracil-5-)-methyltransferase ATY44_14410 PF11967 Recombination protein O N terminal ATY44_14410 PF02565 Recombination protein O C terminal ATY44_14415 PF07650 KH domain ATY44_14415 PF01926 50S ribosome-binding GTPase ATY44_14420 PF00035 Double-stranded RNA binding motif ATY44_14420 PF14622 Ribonuclease-III-like ATY44_14430 PF10502 Signal peptidase, peptidase S26 ATY44_14435 PF06421 GTP-binding protein LepA C-terminus ATY44_14435 PF00679 Elongation factor G C-terminus ATY44_14435 PF00009 Elongation factor Tu GTP binding domain ATY44_14435 PF03144 Elongation factor Tu domain 2 ATY44_14440 PF13180 PDZ domain ATY44_14450 PF08281 Sigma-70, region 4 ATY44_14450 PF04542 Sigma-70 region 2 ATY44_14455 PF00378 Enoyl-CoA hydratase/isomerase ATY44_14455 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ATY44_14455 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ATY44_14460 PF01545 Cation efflux family ATY44_14465 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ATY44_14465 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ATY44_14470 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ATY44_14470 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ATY44_14470 PF00378 Enoyl-CoA hydratase/isomerase ATY44_14475 PF00378 Enoyl-CoA hydratase/isomerase ATY44_14480 PF02770 Acyl-CoA dehydrogenase, middle domain ATY44_14480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATY44_14480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATY44_14485 PF00171 Aldehyde dehydrogenase family ATY44_14490 PF01381 Helix-turn-helix ATY44_14490 PF06114 IrrE N-terminal-like domain ATY44_14490 PF09856 Predicted transcriptional regulator (DUF2083) ATY44_14505 PF07745 Glycosyl hydrolase family 53 ATY44_14540 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_14550 PF17149 Periplasmic sensor domain found in signal transduction proteins ATY44_14550 PF00072 Response regulator receiver domain ATY44_14550 PF01627 Hpt domain ATY44_14550 PF00672 HAMP domain ATY44_14550 PF00512 His Kinase A (phospho-acceptor) domain ATY44_14550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_14555 PF00512 His Kinase A (phospho-acceptor) domain ATY44_14555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_14555 PF01627 Hpt domain ATY44_14555 PF00072 Response regulator receiver domain ATY44_14555 PF17149 Periplasmic sensor domain found in signal transduction proteins ATY44_14555 PF00672 HAMP domain ATY44_14560 PF00512 His Kinase A (phospho-acceptor) domain ATY44_14560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_14560 PF00672 HAMP domain ATY44_14560 PF17149 Periplasmic sensor domain found in signal transduction proteins ATY44_14560 PF00072 Response regulator receiver domain ATY44_14560 PF01627 Hpt domain ATY44_14565 PF04264 YceI-like domain ATY44_14575 PF04264 YceI-like domain ATY44_14585 PF03313 Serine dehydratase alpha chain ATY44_14585 PF03315 Serine dehydratase beta chain ATY44_14595 PF01053 Cys/Met metabolism PLP-dependent enzyme ATY44_14600 PF00561 alpha/beta hydrolase fold ATY44_14605 PF01476 LysM domain ATY44_14605 PF01551 Peptidase family M23 ATY44_14605 PF08525 Opacity-associated protein A N-terminal motif ATY44_14610 PF00009 Elongation factor Tu GTP binding domain ATY44_14610 PF16658 Class II release factor RF3, C-terminal domain ATY44_14615 PF03006 Haemolysin-III related ATY44_14625 PF05598 Transposase domain (DUF772) ATY44_14630 PF00478 IMP dehydrogenase / GMP reductase domain ATY44_14630 PF00571 CBS domain ATY44_14635 PF00535 Glycosyl transferase family 2 ATY44_14640 PF00912 Transglycosylase ATY44_14645 PF01430 Hsp33 protein ATY44_14655 PF00593 TonB dependent receptor ATY44_14655 PF07715 TonB-dependent Receptor Plug Domain ATY44_14660 PF00440 Bacterial regulatory proteins, tetR family ATY44_14665 PF00561 alpha/beta hydrolase fold ATY44_14670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATY44_14670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATY44_14670 PF09317 Domain of unknown function (DUF1974) ATY44_14695 PF01597 Glycine cleavage H-protein ATY44_14700 PF08669 Glycine cleavage T-protein C-terminal barrel domain ATY44_14700 PF01571 Aminomethyltransferase folate-binding domain ATY44_14710 PF16200 C-terminal region of band_7 ATY44_14710 PF01145 SPFH domain / Band 7 family ATY44_14720 PF03819 MazG nucleotide pyrophosphohydrolase domain ATY44_14725 PF00459 Inositol monophosphatase family ATY44_14730 PF00293 NUDIX domain ATY44_14735 PF00202 Aminotransferase class-III ATY44_14740 PF04452 RNA methyltransferase ATY44_14745 PF02685 Glucokinase ATY44_14760 PF00704 Glycosyl hydrolases family 18 ATY44_14760 PF01476 LysM domain ATY44_14765 PF02838 Glycosyl hydrolase family 20, domain 2 ATY44_14765 PF00728 Glycosyl hydrolase family 20, catalytic domain ATY44_14765 PF07691 PA14 domain ATY44_14775 PF01915 Glycosyl hydrolase family 3 C-terminal domain ATY44_14775 PF00933 Glycosyl hydrolase family 3 N terminal domain ATY44_14775 PF14310 Fibronectin type III-like domain ATY44_14775 PF07691 PA14 domain ATY44_14780 PF00005 ABC transporter ATY44_14780 PF03412 Peptidase C39 family ATY44_14780 PF00664 ABC transporter transmembrane region ATY44_14830 PF07971 Glycosyl hydrolase family 92 ATY44_14830 PF17678 Glycosyl hydrolase family 92 N-terminal domain ATY44_14835 PF01301 Glycosyl hydrolases family 35 ATY44_14870 PF03932 CutC family ATY44_14875 PF01112 Asparaginase ATY44_14885 PF12034 Domain of unknown function (DUF3520) ATY44_14885 PF00092 von Willebrand factor type A domain ATY44_14885 PF12450 von Willebrand factor ATY44_14905 PF13302 Acetyltransferase (GNAT) domain ATY44_14920 PF00072 Response regulator receiver domain ATY44_14920 PF01627 Hpt domain ATY44_14920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_14920 PF01584 CheW-like domain ATY44_14925 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ATY44_14925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY44_14930 PF01584 CheW-like domain ATY44_14935 PF00072 Response regulator receiver domain ATY44_14940 PF00072 Response regulator receiver domain ATY44_14945 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ATY44_14945 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ATY44_14955 PF03747 ADP-ribosylglycohydrolase ATY44_14960 PF00814 Glycoprotease family ATY44_14965 PF04851 Type III restriction enzyme, res subunit ATY44_14965 PF13307 Helicase C-terminal domain ATY44_14975 PF00905 Penicillin binding protein transpeptidase domain ATY44_14975 PF14814 Bifunctional transglycosylase second domain ATY44_14975 PF00912 Transglycosylase ATY44_14980 PF00535 Glycosyl transferase family 2 ATY44_14990 PF04607 Region found in RelA / SpoT proteins ATY44_14990 PF13291 ACT domain ATY44_14990 PF02824 TGS domain ATY44_14995 PF12706 Beta-lactamase superfamily domain ATY44_15000 PF03070 TENA/THI-4/PQQC family ATY44_15005 PF05402 Coenzyme PQQ synthesis protein D (PqqD) ATY44_15010 PF04055 Radical SAM superfamily ATY44_15010 PF13186 Iron-sulfur cluster-binding domain ATY44_15025 PF02685 Glucokinase ATY44_15030 PF02685 Glucokinase ATY44_15035 PF02685 Glucokinase ATY44_15045 PF11898 Domain of unknown function (DUF3418) ATY44_15045 PF00270 DEAD/DEAH box helicase ATY44_15045 PF00271 Helicase conserved C-terminal domain ATY44_15045 PF04408 Helicase associated domain (HA2) ATY44_15045 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ATY44_15050 PF00210 Ferritin-like domain ATY44_15055 PF16124 RecQ zinc-binding ATY44_15055 PF09382 RQC domain ATY44_15055 PF00270 DEAD/DEAH box helicase ATY44_15055 PF00570 HRDC domain ATY44_15055 PF00271 Helicase conserved C-terminal domain ATY44_15075 PF06508 Queuosine biosynthesis protein QueC ATY44_15080 PF05598 Transposase domain (DUF772) ATY44_15085 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_15100 PF04055 Radical SAM superfamily ATY44_15110 PF00691 OmpA family ATY44_15115 PF04052 TolB amino-terminal domain ATY44_15115 PF07676 WD40-like Beta Propeller Repeat ATY44_15125 PF02472 Biopolymer transport protein ExbD/TolR ATY44_15130 PF01618 MotA/TolQ/ExbB proton channel family ATY44_15135 PF03061 Thioesterase superfamily ATY44_15140 PF05496 Holliday junction DNA helicase RuvB P-loop domain ATY44_15140 PF05491 RuvB C-terminal winged helix domain ATY44_15140 PF17864 RuvB AAA lid domain ATY44_15145 PF02705 K+ potassium transporter ATY44_15150 PF01330 RuvA N terminal domain ATY44_15150 PF07499 RuvA, C-terminal domain ATY44_15155 PF02075 Crossover junction endodeoxyribonuclease RuvC ATY44_15160 PF01709 Transcriptional regulator ATY44_15175 PF01336 OB-fold nucleic acid binding domain ATY44_15175 PF00152 tRNA synthetases class II (D, K and N) ATY44_15175 PF02938 GAD domain ATY44_15195 PF05506 Domain of unknown function (DUF756) ATY44_15195 PF04185 Phosphoesterase family ATY44_15200 PF05506 Domain of unknown function (DUF756) ATY44_15200 PF04185 Phosphoesterase family ATY44_15205 PF05506 Domain of unknown function (DUF756) ATY44_15205 PF04185 Phosphoesterase family ATY44_15225 PF18073 Rubredoxin metal binding domain ATY44_15235 PF01527 Transposase ATY44_15245 PF13683 Integrase core domain ATY44_15245 PF13276 HTH-like domain ATY44_15255 PF01624 MutS domain I ATY44_15255 PF05190 MutS family domain IV ATY44_15255 PF05192 MutS domain III ATY44_15255 PF00488 MutS domain V ATY44_15255 PF05188 MutS domain II ATY44_15280 PF13683 Integrase core domain ATY44_15280 PF13276 HTH-like domain ATY44_15285 PF01527 Transposase ATY44_15305 PF01609 Transposase DDE domain ATY44_15305 PF05598 Transposase domain (DUF772) ATY44_15310 PF01609 Transposase DDE domain ATY44_15310 PF05598 Transposase domain (DUF772) ATY44_15325 PF01609 Transposase DDE domain ATY44_15325 PF05598 Transposase domain (DUF772) ATY44_15360 PF00872 Transposase, Mutator family ATY44_15370 PF03527 RHS protein ATY44_15370 PF05593 RHS Repeat ATY44_15380 PF04717 Type VI secretion system, phage-baseplate injector ATY44_15390 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ATY44_15395 PF00510 Cytochrome c oxidase subunit III ATY44_15400 PF00115 Cytochrome C and Quinol oxidase polypeptide I ATY44_15405 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ATY44_15405 PF06481 COX Aromatic Rich Motif ATY44_15415 PF02401 LytB protein ATY44_15420 PF01252 Signal peptidase (SPase) II ATY44_15425 PF06827 Zinc finger found in FPG and IleRS ATY44_15425 PF08264 Anticodon-binding domain of tRNA ATY44_15425 PF00133 tRNA synthetases class I (I, L, M and V) ATY44_15430 PF01687 Riboflavin kinase ATY44_15430 PF06574 FAD synthetase ATY44_15435 PF03023 Lipid II flippase MurJ ATY44_15440 PF01649 Ribosomal protein S20 ATY44_15445 PF01926 50S ribosome-binding GTPase ATY44_15445 PF01018 GTP1/OBG ATY44_15450 PF01016 Ribosomal L27 protein ATY44_15455 PF00829 Ribosomal prokaryotic L21 protein ATY44_15460 PF17755 UvrA DNA-binding domain ATY44_15460 PF00005 ABC transporter ATY44_15460 PF17760 UvrA interaction domain ATY44_15475 PF00378 Enoyl-CoA hydratase/isomerase ATY44_15490 PF04542 Sigma-70 region 2 ATY44_15490 PF08281 Sigma-70, region 4 ATY44_15505 PF04377 Arginine-tRNA-protein transferase, C terminus ATY44_15505 PF04376 Arginine-tRNA-protein transferase, N terminus ATY44_15535 PF00593 TonB dependent receptor ATY44_15535 PF07715 TonB-dependent Receptor Plug Domain ATY44_15545 PF02358 Trehalose-phosphatase ATY44_15550 PF00723 Glycosyl hydrolases family 15 ATY44_15555 PF00982 Glycosyltransferase family 20 ATY44_15575 PF00849 RNA pseudouridylate synthase ATY44_15580 PF13525 Outer membrane lipoprotein ATY44_15585 PF00795 Carbon-nitrogen hydrolase ATY44_15585 PF02540 NAD synthase ATY44_15595 PF02629 CoA binding domain ATY44_15595 PF00549 CoA-ligase ATY44_15600 PF08442 ATP-grasp domain ATY44_15600 PF00549 CoA-ligase ATY44_15605 PF00512 His Kinase A (phospho-acceptor) domain ATY44_15605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_15610 PF02954 Bacterial regulatory protein, Fis family ATY44_15610 PF00158 Sigma-54 interaction domain ATY44_15610 PF00072 Response regulator receiver domain ATY44_15620 PF18543 Intracellular delivery domain ATY44_15620 PF02661 Fic/DOC family ATY44_15625 PF00437 Type II/IV secretion system protein ATY44_15625 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ATY44_15640 PF00884 Sulfatase ATY44_15640 PF08019 Phosphoethanolamine transferase EptA/EptB ATY44_15645 PF07963 Prokaryotic N-terminal methylation motif ATY44_15645 PF00114 Pilin (bacterial filament) ATY44_15650 PF00482 Type II secretion system (T2SS), protein F ATY44_15655 PF01478 Type IV leader peptidase family ATY44_15655 PF06750 Bacterial Peptidase A24 N-terminal domain ATY44_15660 PF01121 Dephospho-CoA kinase ATY44_15675 PF05598 Transposase domain (DUF772) ATY44_15675 PF01609 Transposase DDE domain ATY44_15690 PF05598 Transposase domain (DUF772) ATY44_15690 PF01609 Transposase DDE domain ATY44_15700 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_15710 PF00005 ABC transporter ATY44_15710 PF00664 ABC transporter transmembrane region ATY44_15720 PF00873 AcrB/AcrD/AcrF family ATY44_15735 PF02321 Outer membrane efflux protein ATY44_15740 PF00072 Response regulator receiver domain ATY44_15740 PF00486 Transcriptional regulatory protein, C terminal ATY44_15745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_15745 PF00512 His Kinase A (phospho-acceptor) domain ATY44_15745 PF00672 HAMP domain ATY44_15750 PF00999 Sodium/hydrogen exchanger family ATY44_15755 PF00144 Beta-lactamase ATY44_15760 PF03737 Aldolase/RraA ATY44_15775 PF01479 S4 domain ATY44_15775 PF00849 RNA pseudouridylate synthase ATY44_15780 PF08448 PAS fold ATY44_15780 PF00990 Diguanylate cyclase, GGDEF domain ATY44_15780 PF00563 EAL domain ATY44_15785 PF00271 Helicase conserved C-terminal domain ATY44_15785 PF03880 DbpA RNA binding domain ATY44_15785 PF00270 DEAD/DEAH box helicase ATY44_15835 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ATY44_15835 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ATY44_15845 PF00654 Voltage gated chloride channel ATY44_15850 PF08240 Alcohol dehydrogenase GroES-like domain ATY44_15850 PF00107 Zinc-binding dehydrogenase ATY44_15870 PF07715 TonB-dependent Receptor Plug Domain ATY44_15870 PF00593 TonB dependent receptor ATY44_15890 PF05736 OprF membrane domain ATY44_15890 PF00691 OmpA family ATY44_15900 PF03441 FAD binding domain of DNA photolyase ATY44_15900 PF00875 DNA photolyase ATY44_15905 PF00772 DnaB-like helicase N terminal domain ATY44_15905 PF03796 DnaB-like helicase C terminal domain ATY44_15910 PF03358 NADPH-dependent FMN reductase ATY44_15915 PF00733 Asparagine synthase ATY44_15915 PF13537 Glutamine amidotransferase domain ATY44_15920 PF13417 Glutathione S-transferase, N-terminal domain ATY44_15940 PF02770 Acyl-CoA dehydrogenase, middle domain ATY44_15940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATY44_15940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATY44_15955 PF01026 TatD related DNase ATY44_15960 PF00899 ThiF family ATY44_15975 PF00313 'Cold-shock' DNA-binding domain ATY44_16000 PF01475 Ferric uptake regulator family ATY44_16005 PF00749 tRNA synthetases class I (E and Q), catalytic domain ATY44_16030 PF05598 Transposase domain (DUF772) ATY44_16030 PF01609 Transposase DDE domain ATY44_16060 PF01609 Transposase DDE domain ATY44_16060 PF05598 Transposase domain (DUF772) ATY44_16085 PF00672 HAMP domain ATY44_16085 PF00512 His Kinase A (phospho-acceptor) domain ATY44_16085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_16095 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ATY44_16105 PF02559 CarD-like/TRCF domain ATY44_16105 PF00271 Helicase conserved C-terminal domain ATY44_16105 PF03461 TRCF domain ATY44_16105 PF17757 UvrB interaction domain ATY44_16105 PF00270 DEAD/DEAH box helicase ATY44_16115 PF01627 Hpt domain ATY44_16115 PF02895 Signal transducing histidine kinase, homodimeric domain ATY44_16115 PF01584 CheW-like domain ATY44_16115 PF09078 CheY binding ATY44_16115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_16120 PF02203 Tar ligand binding domain homologue ATY44_16120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY44_16120 PF00672 HAMP domain ATY44_16125 PF01584 CheW-like domain ATY44_16130 PF00563 EAL domain ATY44_16130 PF13426 PAS domain ATY44_16130 PF00990 Diguanylate cyclase, GGDEF domain ATY44_16135 PF03705 CheR methyltransferase, all-alpha domain ATY44_16135 PF01739 CheR methyltransferase, SAM binding domain ATY44_16140 PF00072 Response regulator receiver domain ATY44_16140 PF01339 CheB methylesterase ATY44_16150 PF01431 Peptidase family M13 ATY44_16150 PF05649 Peptidase family M13 ATY44_16160 PF00300 Histidine phosphatase superfamily (branch 1) ATY44_16165 PF04493 Endonuclease V ATY44_16175 PF02678 Pirin ATY44_16175 PF05726 Pirin C-terminal cupin domain ATY44_16215 PF04717 Type VI secretion system, phage-baseplate injector ATY44_16225 PF01609 Transposase DDE domain ATY44_16225 PF05598 Transposase domain (DUF772) ATY44_16245 PF04717 Type VI secretion system, phage-baseplate injector ATY44_16260 PF04717 Type VI secretion system, phage-baseplate injector ATY44_16270 PF02678 Pirin ATY44_16270 PF05726 Pirin C-terminal cupin domain ATY44_16275 PF13722 5TM C-terminal transporter carbon starvation CstA ATY44_16275 PF02554 Carbon starvation protein CstA ATY44_16280 PF04328 Selenoprotein, putative ATY44_16305 PF00107 Zinc-binding dehydrogenase ATY44_16305 PF16197 Ketoacyl-synthetase C-terminal extension ATY44_16305 PF14765 Polyketide synthase dehydratase ATY44_16305 PF00550 Phosphopantetheine attachment site ATY44_16305 PF08659 KR domain ATY44_16305 PF00109 Beta-ketoacyl synthase, N-terminal domain ATY44_16305 PF02801 Beta-ketoacyl synthase, C-terminal domain ATY44_16305 PF00698 Acyl transferase domain ATY44_16305 PF08240 Alcohol dehydrogenase GroES-like domain ATY44_16310 PF01590 GAF domain ATY44_16310 PF00990 Diguanylate cyclase, GGDEF domain ATY44_16310 PF00360 Phytochrome region ATY44_16310 PF00563 EAL domain ATY44_16320 PF00436 Single-strand binding protein family ATY44_16325 PF00348 Polyprenyl synthetase ATY44_16340 PF08245 Mur ligase middle domain ATY44_16355 PF01842 ACT domain ATY44_16355 PF00696 Amino acid kinase family ATY44_16365 PF02567 Phenazine biosynthesis-like protein ATY44_16370 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_16385 PF02566 OsmC-like protein ATY44_16390 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ATY44_16390 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ATY44_16395 PF03652 Holliday junction resolvase ATY44_16400 PF02622 Uncharacterized ACR, COG1678 ATY44_16415 PF00117 Glutamine amidotransferase class-I ATY44_16415 PF03352 Methyladenine glycosylase ATY44_16415 PF13302 Acetyltransferase (GNAT) domain ATY44_16415 PF00958 GMP synthase C terminal domain ATY44_16415 PF13673 Acetyltransferase (GNAT) domain ATY44_16430 PF00437 Type II/IV secretion system protein ATY44_16435 PF00437 Type II/IV secretion system protein ATY44_16440 PF01168 Alanine racemase, N-terminal domain ATY44_16445 PF03807 NADP oxidoreductase coenzyme F420-dependent ATY44_16445 PF14748 Pyrroline-5-carboxylate reductase dimerisation ATY44_16495 PF02082 Transcriptional regulator ATY44_16500 PF01458 Uncharacterized protein family (UPF0051) ATY44_16505 PF00005 ABC transporter ATY44_16510 PF01458 Uncharacterized protein family (UPF0051) ATY44_16515 PF00266 Aminotransferase class-V ATY44_16525 PF00355 Rieske [2Fe-2S] domain ATY44_16530 PF05598 Transposase domain (DUF772) ATY44_16530 PF01609 Transposase DDE domain ATY44_16535 PF01527 Transposase ATY44_16540 PF13683 Integrase core domain ATY44_16540 PF13276 HTH-like domain ATY44_16555 PF00266 Aminotransferase class-V ATY44_16560 PF01053 Cys/Met metabolism PLP-dependent enzyme ATY44_16575 PF00872 Transposase, Mutator family ATY44_16585 PF01527 Transposase ATY44_16590 PF13276 HTH-like domain ATY44_16610 PF00183 Hsp90 protein ATY44_16610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_16615 PF12833 Helix-turn-helix domain ATY44_16635 PF13472 GDSL-like Lipase/Acylhydrolase family ATY44_16635 PF07859 alpha/beta hydrolase fold ATY44_16645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY44_16645 PF03466 LysR substrate binding domain ATY44_16660 PF12848 ABC transporter ATY44_16660 PF00005 ABC transporter ATY44_16685 PF00593 TonB dependent receptor ATY44_16685 PF07715 TonB-dependent Receptor Plug Domain ATY44_16690 PF00593 TonB dependent receptor ATY44_16690 PF07715 TonB-dependent Receptor Plug Domain ATY44_16700 PF00999 Sodium/hydrogen exchanger family ATY44_16700 PF02254 TrkA-N domain ATY44_16705 PF13683 Integrase core domain ATY44_16705 PF13276 HTH-like domain ATY44_16715 PF07715 TonB-dependent Receptor Plug Domain ATY44_16715 PF07660 Secretin and TonB N terminus short domain ATY44_16715 PF00593 TonB dependent receptor ATY44_16725 PF06276 Ferric iron reductase FhuF-like transporter ATY44_16725 PF04183 IucA / IucC family ATY44_16730 PF07690 Major Facilitator Superfamily ATY44_16740 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ATY44_16740 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ATY44_16745 PF02654 Cobalamin-5-phosphate synthase ATY44_16755 PF02277 Phosphoribosyltransferase ATY44_16760 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ATY44_16770 PF12557 Cob(I)alamin adenosyltransferase N terminal ATY44_16770 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ATY44_16790 PF07715 TonB-dependent Receptor Plug Domain ATY44_16790 PF00593 TonB dependent receptor ATY44_16805 PF01527 Transposase ATY44_16820 PF07724 AAA domain (Cdc48 subfamily) ATY44_16820 PF02861 Clp amino terminal domain, pathogenicity island component ATY44_16820 PF17871 AAA lid domain ATY44_16820 PF00004 ATPase family associated with various cellular activities (AAA) ATY44_16820 PF10431 C-terminal, D2-small domain, of ClpB protein ATY44_16825 PF01541 GIY-YIG catalytic domain ATY44_16860 PF01479 S4 domain ATY44_16865 PF01554 MatE ATY44_16870 PF01245 Ribosomal protein L19 ATY44_16875 PF01746 tRNA (Guanine-1)-methyltransferase ATY44_16880 PF01782 RimM N-terminal domain ATY44_16880 PF05239 PRC-barrel domain ATY44_16885 PF00886 Ribosomal protein S16 ATY44_16895 PF03060 Nitronate monooxygenase ATY44_16905 PF02881 SRP54-type protein, helical bundle domain ATY44_16905 PF02978 Signal peptide binding domain ATY44_16905 PF00448 SRP54-type protein, GTPase domain ATY44_16915 PF01578 Cytochrome C assembly protein ATY44_16920 PF01263 Aldose 1-epimerase ATY44_16925 PF06964 Alpha-L-arabinofuranosidase C-terminal domain ATY44_16960 PF01527 Transposase ATY44_16965 PF13333 Integrase core domain ATY44_16965 PF00665 Integrase core domain ATY44_16965 PF13276 HTH-like domain ATY44_16975 PF01546 Peptidase family M20/M25/M40 ATY44_16975 PF07687 Peptidase dimerisation domain ATY44_16990 PF01636 Phosphotransferase enzyme family ATY44_16995 PF00483 Nucleotidyl transferase ATY44_17000 PF00308 Bacterial dnaA protein ATY44_17005 PF01594 AI-2E family transporter ATY44_17015 PF02769 AIR synthase related protein, C-terminal domain ATY44_17015 PF00586 AIR synthase related protein, N-terminal domain ATY44_17030 PF00551 Formyl transferase ATY44_17050 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ATY44_17055 PF01722 BolA-like protein ATY44_17060 PF01380 SIS domain ATY44_17060 PF00571 CBS domain ATY44_17075 PF03968 OstA-like protein ATY44_17080 PF00005 ABC transporter ATY44_17085 PF00309 Sigma-54 factor, Activator interacting domain (AID) ATY44_17085 PF04963 Sigma-54 factor, core binding domain ATY44_17085 PF04552 Sigma-54, DNA binding domain ATY44_17090 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ATY44_17095 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ATY44_17100 PF02603 HPr Serine kinase N terminus ATY44_17100 PF07475 HPr Serine kinase C-terminal domain ATY44_17105 PF03668 P-loop ATPase protein family ATY44_17115 PF00381 PTS HPr component phosphorylation site ATY44_17120 PF02896 PEP-utilising enzyme, TIM barrel domain ATY44_17120 PF00391 PEP-utilising enzyme, mobile domain ATY44_17120 PF05524 PEP-utilising enzyme, N-terminal ATY44_17125 PF01769 Divalent cation transporter ATY44_17125 PF00571 CBS domain ATY44_17125 PF03448 MgtE intracellular N domain ATY44_17130 PF00756 Putative esterase ATY44_17135 PF02322 Cytochrome bd terminal oxidase subunit II ATY44_17140 PF01654 Cytochrome bd terminal oxidase subunit I ATY44_17150 PF00324 Amino acid permease ATY44_17155 PF00561 alpha/beta hydrolase fold ATY44_17160 PF00196 Bacterial regulatory proteins, luxR family ATY44_17165 PF00324 Amino acid permease ATY44_17185 PF12706 Beta-lactamase superfamily domain ATY44_17220 PF09278 MerR, DNA binding ATY44_17220 PF00376 MerR family regulatory protein ATY44_17240 PF03738 Glutathionylspermidine synthase preATP-grasp ATY44_17265 PF04012 PspA/IM30 family ATY44_17275 PF01243 Pyridoxamine 5'-phosphate oxidase ATY44_17275 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ATY44_17280 PF01202 Shikimate kinase ATY44_17285 PF01761 3-dehydroquinate synthase ATY44_17295 PF01208 Uroporphyrinogen decarboxylase (URO-D) ATY44_17315 PF03377 TAL effector repeat ATY44_17330 PF03377 TAL effector repeat ATY44_17345 PF03377 TAL effector repeat ATY44_17360 PF03377 TAL effector repeat ATY44_17375 PF03377 TAL effector repeat ATY44_17400 PF00202 Aminotransferase class-III ATY44_17410 PF00127 Copper binding proteins, plastocyanin/azurin family ATY44_17420 PF00155 Aminotransferase class I and II ATY44_17435 PF00034 Cytochrome c ATY44_17435 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ATY44_17440 PF01593 Flavin containing amine oxidoreductase ATY44_17455 PF00202 Aminotransferase class-III ATY44_17460 PF00520 Ion transport protein ATY44_17460 PF00027 Cyclic nucleotide-binding domain ATY44_17495 PF01609 Transposase DDE domain ATY44_17495 PF05598 Transposase domain (DUF772) ATY44_17500 PF18030 RimK PreATP-grasp domain ATY44_17500 PF08443 RimK-like ATP-grasp domain ATY44_17515 PF00072 Response regulator receiver domain ATY44_17515 PF00486 Transcriptional regulatory protein, C terminal ATY44_17520 PF00512 His Kinase A (phospho-acceptor) domain ATY44_17520 PF00672 HAMP domain ATY44_17520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_17535 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_17540 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ATY44_17540 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ATY44_17585 PF00753 Metallo-beta-lactamase superfamily ATY44_17585 PF04273 Putative phosphatase (DUF442) ATY44_17595 PF00528 Binding-protein-dependent transport system inner membrane component ATY44_17600 PF03459 TOBE domain ATY44_17600 PF00005 ABC transporter ATY44_17620 PF00512 His Kinase A (phospho-acceptor) domain ATY44_17620 PF08521 Two-component sensor kinase N-terminal ATY44_17620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_17625 PF00486 Transcriptional regulatory protein, C terminal ATY44_17625 PF00072 Response regulator receiver domain ATY44_17645 PF00501 AMP-binding enzyme ATY44_17670 PF01476 LysM domain ATY44_17670 PF03734 L,D-transpeptidase catalytic domain ATY44_17675 PF01551 Peptidase family M23 ATY44_17675 PF04225 Opacity-associated protein A LysM-like domain ATY44_17680 PF00593 TonB dependent receptor ATY44_17680 PF07715 TonB-dependent Receptor Plug Domain ATY44_17685 PF02779 Transketolase, pyrimidine binding domain ATY44_17685 PF02780 Transketolase, C-terminal domain ATY44_17685 PF00456 Transketolase, thiamine diphosphate binding domain ATY44_17690 PF00375 Sodium:dicarboxylate symporter family ATY44_17705 PF07584 Aerotolerance regulator N-terminal ATY44_17705 PF00092 von Willebrand factor type A domain ATY44_17725 PF17863 AAA lid domain ATY44_17725 PF07726 ATPase family associated with various cellular activities (AAA) ATY44_17750 PF07660 Secretin and TonB N terminus short domain ATY44_17750 PF03958 Bacterial type II/III secretion system short domain ATY44_17750 PF00263 Bacterial type II and III secretion system protein ATY44_17750 PF11741 AMIN domain ATY44_17775 PF17092 Penicillin-binding protein OB-like domain ATY44_17775 PF00912 Transglycosylase ATY44_17775 PF00905 Penicillin binding protein transpeptidase domain ATY44_17790 PF00285 Citrate synthase, C-terminal domain ATY44_17795 PF01197 Ribosomal protein L31 ATY44_17800 PF01156 Inosine-uridine preferring nucleoside hydrolase ATY44_17805 PF00271 Helicase conserved C-terminal domain ATY44_17805 PF17191 RecG wedge domain ATY44_17805 PF00270 DEAD/DEAH box helicase ATY44_17810 PF01042 Endoribonuclease L-PSP ATY44_17815 PF04607 Region found in RelA / SpoT proteins ATY44_17815 PF13291 ACT domain ATY44_17815 PF02824 TGS domain ATY44_17820 PF01192 RNA polymerase Rpb6 ATY44_17835 PF00625 Guanylate kinase ATY44_17840 PF03755 YicC-like family, N-terminal region ATY44_17840 PF08340 Domain of unknown function (DUF1732) ATY44_17845 PF03725 3' exoribonuclease family, domain 2 ATY44_17845 PF01138 3' exoribonuclease family, domain 1 ATY44_17855 PF01725 Ham1 family ATY44_17860 PF04055 Radical SAM superfamily ATY44_17860 PF06969 HemN C-terminal domain ATY44_17875 PF00557 Metallopeptidase family M24 ATY44_17885 PF05195 Aminopeptidase P, N-terminal domain ATY44_17885 PF00557 Metallopeptidase family M24 ATY44_17890 PF03695 Uncharacterised protein family (UPF0149) ATY44_17900 PF05164 Cell division protein ZapA ATY44_17905 PF01812 5-formyltetrahydrofolate cyclo-ligase family ATY44_17915 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ATY44_17925 PF13369 Transglutaminase-like superfamily ATY44_17930 PF00301 Rubredoxin ATY44_17935 PF02581 Thiamine monophosphate synthase ATY44_17950 PF01527 Transposase ATY44_17960 PF13683 Integrase core domain ATY44_17960 PF13276 HTH-like domain ATY44_17965 PF01527 Transposase ATY44_17975 PF03949 Malic enzyme, NAD binding domain ATY44_17975 PF01515 Phosphate acetyl/butaryl transferase ATY44_17975 PF00390 Malic enzyme, N-terminal domain ATY44_17980 PF00375 Sodium:dicarboxylate symporter family ATY44_17990 PF00512 His Kinase A (phospho-acceptor) domain ATY44_17990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_17995 PF07690 Major Facilitator Superfamily ATY44_18005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY44_18005 PF03466 LysR substrate binding domain ATY44_18020 PF00072 Response regulator receiver domain ATY44_18020 PF00196 Bacterial regulatory proteins, luxR family ATY44_18030 PF08521 Two-component sensor kinase N-terminal ATY44_18030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_18030 PF00512 His Kinase A (phospho-acceptor) domain ATY44_18035 PF00072 Response regulator receiver domain ATY44_18035 PF00486 Transcriptional regulatory protein, C terminal ATY44_18045 PF03600 Citrate transporter ATY44_18050 PF00106 short chain dehydrogenase ATY44_18055 PF00356 Bacterial regulatory proteins, lacI family ATY44_18070 PF00128 Alpha amylase, catalytic domain ATY44_18085 PF03193 RsgA GTPase ATY44_18105 PF01522 Polysaccharide deacetylase ATY44_18110 PF00462 Glutaredoxin ATY44_18145 PF01327 Polypeptide deformylase ATY44_18150 PF03960 ArsC family ATY44_18165 PF07726 ATPase family associated with various cellular activities (AAA) ATY44_18165 PF17863 AAA lid domain ATY44_18175 PF11992 Domain of unknown function (DUF3488) ATY44_18175 PF01841 Transglutaminase-like superfamily ATY44_18175 PF13559 Domain of unknown function (DUF4129) ATY44_18185 PF01230 HIT domain ATY44_18190 PF13662 Toprim domain ATY44_18190 PF02132 RecR protein ATY44_18195 PF02575 YbaB/EbfC DNA-binding family ATY44_18200 PF12170 DNA polymerase III tau subunit V interacting with alpha ATY44_18200 PF12169 DNA polymerase III subunits gamma and tau domain III ATY44_18200 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ATY44_18210 PF02391 MoaE protein ATY44_18215 PF02597 ThiS family ATY44_18220 PF01967 MoaC family ATY44_18230 PF04055 Radical SAM superfamily ATY44_18230 PF06463 Molybdenum Cofactor Synthesis C ATY44_18235 PF00753 Metallo-beta-lactamase superfamily ATY44_18235 PF12706 Beta-lactamase superfamily domain ATY44_18245 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ATY44_18255 PF00589 Phage integrase family ATY44_18255 PF13356 Arm DNA-binding domain ATY44_18310 PF16671 Actin cross-linking domain ATY44_18310 PF04717 Type VI secretion system, phage-baseplate injector ATY44_18345 PF00929 Exonuclease ATY44_18350 PF00075 RNase H ATY44_18360 PF00753 Metallo-beta-lactamase superfamily ATY44_18360 PF16123 Hydroxyacylglutathione hydrolase C-terminus ATY44_18365 PF05257 CHAP domain ATY44_18365 PF01476 LysM domain ATY44_18390 PF00216 Bacterial DNA-binding protein ATY44_18395 PF02190 ATP-dependent protease La (LON) substrate-binding domain ATY44_18395 PF05362 Lon protease (S16) C-terminal proteolytic domain ATY44_18395 PF00004 ATPase family associated with various cellular activities (AAA) ATY44_18400 PF10431 C-terminal, D2-small domain, of ClpB protein ATY44_18400 PF06689 ClpX C4-type zinc finger ATY44_18400 PF07724 AAA domain (Cdc48 subfamily) ATY44_18405 PF00574 Clp protease ATY44_18410 PF05697 Bacterial trigger factor protein (TF) ATY44_18410 PF05698 Bacterial trigger factor protein (TF) C-terminus ATY44_18435 PF01527 Transposase ATY44_18465 PF00180 Isocitrate/isopropylmalate dehydrogenase ATY44_18465 PF18324 Hypothetical protein TT1725 ATY44_18490 PF00462 Glutaredoxin ATY44_18495 PF01435 Peptidase family M48 ATY44_18495 PF13181 Tetratricopeptide repeat ATY44_18500 PF00072 Response regulator receiver domain ATY44_18500 PF00486 Transcriptional regulatory protein, C terminal ATY44_18505 PF00512 His Kinase A (phospho-acceptor) domain ATY44_18505 PF11808 Phosphate regulon sensor protein PhoR ATY44_18505 PF00989 PAS fold ATY44_18505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_18510 PF17941 Polyphosphate kinase C-terminal domain 1 ATY44_18510 PF02503 Polyphosphate kinase middle domain ATY44_18510 PF13090 Polyphosphate kinase C-terminal domain 2 ATY44_18510 PF13089 Polyphosphate kinase N-terminal domain ATY44_18515 PF02541 Ppx/GppA phosphatase family ATY44_18520 PF00534 Glycosyl transferases group 1 ATY44_18520 PF13439 Glycosyltransferase Family 4 ATY44_18525 PF01569 PAP2 superfamily ATY44_18530 PF00149 Calcineurin-like phosphoesterase ATY44_18540 PF04305 Protein of unknown function (DUF455) ATY44_18545 PF00156 Phosphoribosyl transferase domain ATY44_18560 PF02875 Mur ligase family, glutamate ligase domain ATY44_18560 PF08245 Mur ligase middle domain ATY44_18565 PF00300 Histidine phosphatase superfamily (branch 1) ATY44_18570 PF10459 Peptidase S46 ATY44_18575 PF04185 Phosphoesterase family ATY44_18575 PF05506 Domain of unknown function (DUF756) ATY44_18585 PF08240 Alcohol dehydrogenase GroES-like domain ATY44_18585 PF00107 Zinc-binding dehydrogenase ATY44_18595 PF00005 ABC transporter ATY44_18595 PF17850 CysA C-terminal regulatory domain ATY44_18595 PF12857 TOBE-like domain ATY44_18600 PF00528 Binding-protein-dependent transport system inner membrane component ATY44_18605 PF00528 Binding-protein-dependent transport system inner membrane component ATY44_18615 PF00155 Aminotransferase class I and II ATY44_18625 PF00849 RNA pseudouridylate synthase ATY44_18635 PF00691 OmpA family ATY44_18635 PF05736 OprF membrane domain ATY44_18640 PF00107 Zinc-binding dehydrogenase ATY44_18640 PF08240 Alcohol dehydrogenase GroES-like domain ATY44_18645 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY44_18645 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ATY44_18660 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_18695 PF03009 Glycerophosphoryl diester phosphodiesterase family ATY44_18705 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_18725 PF01609 Transposase DDE domain ATY44_18725 PF05598 Transposase domain (DUF772) ATY44_18740 PF00043 Glutathione S-transferase, C-terminal domain ATY44_18740 PF02798 Glutathione S-transferase, N-terminal domain ATY44_18745 PF00056 lactate/malate dehydrogenase, NAD binding domain ATY44_18745 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ATY44_18750 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ATY44_18775 PF01474 Class-II DAHP synthetase family ATY44_18785 PF02600 Disulfide bond formation protein DsbB ATY44_18795 PF01527 Transposase ATY44_18845 PF01527 Transposase ATY44_18870 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_18895 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_18920 PF01062 Bestrophin, RFP-TM, chloride channel ATY44_18930 PF08245 Mur ligase middle domain ATY44_18930 PF02875 Mur ligase family, glutamate ligase domain ATY44_18930 PF01225 Mur ligase family, catalytic domain ATY44_18940 PF00365 Phosphofructokinase ATY44_18970 PF00719 Inorganic pyrophosphatase ATY44_18985 PF00593 TonB dependent receptor ATY44_18985 PF07715 TonB-dependent Receptor Plug Domain ATY44_18990 PF12833 Helix-turn-helix domain ATY44_19000 PF13667 ThiC-associated domain ATY44_19000 PF01964 Radical SAM ThiC family ATY44_19005 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ATY44_19005 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ATY44_19010 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ATY44_19010 PF00205 Thiamine pyrophosphate enzyme, central domain ATY44_19010 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ATY44_19020 PF00291 Pyridoxal-phosphate dependent enzyme ATY44_19025 PF08502 LeuA allosteric (dimerisation) domain ATY44_19025 PF00682 HMGL-like ATY44_19030 PF00180 Isocitrate/isopropylmalate dehydrogenase ATY44_19040 PF00694 Aconitase C-terminal domain ATY44_19045 PF00330 Aconitase family (aconitate hydratase) ATY44_19050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY44_19085 PF02321 Outer membrane efflux protein ATY44_19090 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ATY44_19095 PF03279 Bacterial lipid A biosynthesis acyltransferase ATY44_19135 PF01433 Peptidase family M1 domain ATY44_19135 PF11838 ERAP1-like C-terminal domain ATY44_19140 PF00709 Adenylosuccinate synthetase ATY44_19150 PF01145 SPFH domain / Band 7 family ATY44_19155 PF12221 Bacterial membrane protein N terminal ATY44_19155 PF01145 SPFH domain / Band 7 family ATY44_19160 PF00072 Response regulator receiver domain ATY44_19165 PF00226 DnaJ domain ATY44_19165 PF01556 DnaJ C terminal domain ATY44_19175 PF08534 Redoxin ATY44_19215 PF00593 TonB dependent receptor ATY44_19215 PF07715 TonB-dependent Receptor Plug Domain ATY44_19220 PF04303 PrpF protein ATY44_19225 PF00330 Aconitase family (aconitate hydratase) ATY44_19225 PF00694 Aconitase C-terminal domain ATY44_19230 PF00285 Citrate synthase, C-terminal domain ATY44_19240 PF02954 Bacterial regulatory protein, Fis family ATY44_19240 PF06506 Propionate catabolism activator ATY44_19240 PF00158 Sigma-54 interaction domain ATY44_19260 PF09115 DNA polymerase III, delta subunit, C terminal ATY44_19265 PF02618 YceG-like family ATY44_19270 PF04715 Anthranilate synthase component I, N terminal region ATY44_19270 PF00425 chorismate binding enzyme ATY44_19275 PF00109 Beta-ketoacyl synthase, N-terminal domain ATY44_19275 PF02801 Beta-ketoacyl synthase, C-terminal domain ATY44_19280 PF00550 Phosphopantetheine attachment site ATY44_19290 PF00698 Acyl transferase domain ATY44_19300 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ATY44_19300 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ATY44_19305 PF01783 Ribosomal L32p protein family ATY44_19310 PF02620 Large ribosomal RNA subunit accumulation protein YceD ATY44_19315 PF02545 Maf-like protein ATY44_19330 PF09704 CRISPR-associated protein (Cas_Cas5) ATY44_19350 PF01867 CRISPR associated protein Cas1 ATY44_19355 PF09827 CRISPR associated protein Cas2 ATY44_19380 PF00593 TonB dependent receptor ATY44_19380 PF07715 TonB-dependent Receptor Plug Domain ATY44_19390 PF07702 UTRA domain ATY44_19390 PF00392 Bacterial regulatory proteins, gntR family ATY44_19400 PF03958 Bacterial type II/III secretion system short domain ATY44_19400 PF00263 Bacterial type II and III secretion system protein ATY44_19410 PF10741 Type II secretion system (T2SS), protein M subtype b ATY44_19415 PF05137 Fimbrial assembly protein (PilN) ATY44_19420 PF03934 Type II secretion system (T2SS), protein K ATY44_19430 PF07963 Prokaryotic N-terminal methylation motif ATY44_19435 PF12019 Type II transport protein GspH ATY44_19440 PF08334 Type II secretion system (T2SS), protein G ATY44_19445 PF00482 Type II secretion system (T2SS), protein F ATY44_19455 PF00437 Type II/IV secretion system protein ATY44_19455 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ATY44_19465 PF03895 YadA-like membrane anchor domain ATY44_19465 PF05662 Coiled stalk of trimeric autotransporter adhesin ATY44_19465 PF13018 Extended Signal Peptide of Type V secretion system ATY44_19465 PF05658 Head domain of trimeric autotransporter adhesin ATY44_19470 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ATY44_19470 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ATY44_19470 PF02769 AIR synthase related protein, C-terminal domain ATY44_19475 PF13098 Thioredoxin-like domain ATY44_19475 PF10411 Disulfide bond isomerase protein N-terminus ATY44_19480 PF02899 Phage integrase, N-terminal SAM-like domain ATY44_19480 PF00589 Phage integrase family ATY44_19495 PF03739 Lipopolysaccharide export system permease LptF/LptG ATY44_19505 PF02789 Cytosol aminopeptidase family, N-terminal domain ATY44_19505 PF00883 Cytosol aminopeptidase family, catalytic domain ATY44_19520 PF10458 Valyl tRNA synthetase tRNA binding arm ATY44_19520 PF00133 tRNA synthetases class I (I, L, M and V) ATY44_19520 PF08264 Anticodon-binding domain of tRNA ATY44_19530 PF01527 Transposase ATY44_19535 PF13276 HTH-like domain ATY44_19535 PF13683 Integrase core domain ATY44_19545 PF05598 Transposase domain (DUF772) ATY44_19545 PF01609 Transposase DDE domain ATY44_19555 PF00544 Pectate lyase ATY44_19560 PF01464 Transglycosylase SLT domain ATY44_19560 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ATY44_19570 PF05598 Transposase domain (DUF772) ATY44_19570 PF01609 Transposase DDE domain ATY44_19600 PF01066 CDP-alcohol phosphatidyltransferase ATY44_19610 PF03129 Anticodon binding domain ATY44_19610 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ATY44_19610 PF04073 Aminoacyl-tRNA editing domain ATY44_19615 PF00816 H-NS histone family ATY44_19625 PF02405 Permease MlaE ATY44_19630 PF00005 ABC transporter ATY44_19635 PF03886 ABC-type transport auxiliary lipoprotein component ATY44_19635 PF02470 MlaD protein ATY44_19655 PF14307 Glycosyltransferase WbsX ATY44_19655 PF05045 Rhamnan synthesis protein F ATY44_19660 PF01144 Coenzyme A transferase ATY44_19665 PF01144 Coenzyme A transferase ATY44_19670 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ATY44_19670 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ATY44_19670 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ATY44_19670 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ATY44_19675 PF00483 Nucleotidyl transferase ATY44_19675 PF01050 Mannose-6-phosphate isomerase ATY44_19680 PF04321 RmlD substrate binding domain ATY44_19685 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ATY44_19690 PF00483 Nucleotidyl transferase ATY44_19695 PF16363 GDP-mannose 4,6 dehydratase ATY44_19700 PF01012 Electron transfer flavoprotein domain ATY44_19705 PF00766 Electron transfer flavoprotein FAD-binding domain ATY44_19705 PF01012 Electron transfer flavoprotein domain ATY44_19715 PF00005 ABC transporter ATY44_19725 PF00872 Transposase, Mutator family ATY44_19755 PF01370 NAD dependent epimerase/dehydratase family ATY44_19765 PF01053 Cys/Met metabolism PLP-dependent enzyme ATY44_19770 PF00571 CBS domain ATY44_19770 PF00291 Pyridoxal-phosphate dependent enzyme ATY44_19790 PF00437 Type II/IV secretion system protein ATY44_19795 PF14497 Glutathione S-transferase, C-terminal domain ATY44_19795 PF02798 Glutathione S-transferase, N-terminal domain ATY44_19805 PF00271 Helicase conserved C-terminal domain ATY44_19805 PF00270 DEAD/DEAH box helicase ATY44_19815 PF01242 6-pyruvoyl tetrahydropterin synthase ATY44_19830 PF13185 GAF domain ATY44_19840 PF13419 Haloacid dehalogenase-like hydrolase ATY44_19845 PF11799 impB/mucB/samB family C-terminal domain ATY44_19845 PF00817 impB/mucB/samB family ATY44_19850 PF07977 FabA-like domain ATY44_19855 PF00109 Beta-ketoacyl synthase, N-terminal domain ATY44_19855 PF02801 Beta-ketoacyl synthase, C-terminal domain ATY44_19865 PF01432 Peptidase family M3 ATY44_19880 PF07731 Multicopper oxidase ATY44_19880 PF07732 Multicopper oxidase ATY44_19880 PF00394 Multicopper oxidase ATY44_19885 PF05275 Copper resistance protein B precursor (CopB) ATY44_19890 PF01609 Transposase DDE domain ATY44_19890 PF05598 Transposase domain (DUF772) ATY44_19895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ATY44_19905 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_19920 PF01380 SIS domain ATY44_19925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ATY44_19930 PF08402 TOBE domain ATY44_19930 PF00005 ABC transporter ATY44_19960 PF13426 PAS domain ATY44_19960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_19960 PF00512 His Kinase A (phospho-acceptor) domain ATY44_19960 PF08448 PAS fold ATY44_19960 PF00072 Response regulator receiver domain ATY44_19965 PF14602 Hexapeptide repeat of succinyl-transferase ATY44_19965 PF00132 Bacterial transferase hexapeptide (six repeats) ATY44_19965 PF12804 MobA-like NTP transferase domain ATY44_19975 PF01817 Chorismate mutase type II ATY44_19980 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ATY44_19985 PF02874 ATP synthase alpha/beta family, beta-barrel domain ATY44_19985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATY44_19990 PF00231 ATP synthase ATY44_19995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATY44_19995 PF00306 ATP synthase alpha/beta chain, C terminal domain ATY44_19995 PF02874 ATP synthase alpha/beta family, beta-barrel domain ATY44_20000 PF00213 ATP synthase delta (OSCP) subunit ATY44_20005 PF00430 ATP synthase B/B' CF(0) ATY44_20010 PF00137 ATP synthase subunit C ATY44_20015 PF00119 ATP synthase A chain ATY44_20035 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY44_20035 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ATY44_20045 PF00364 Biotin-requiring enzyme ATY44_20045 PF02817 e3 binding domain ATY44_20045 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ATY44_20070 PF03180 NLPA lipoprotein ATY44_20075 PF00528 Binding-protein-dependent transport system inner membrane component ATY44_20080 PF00005 ABC transporter ATY44_20080 PF09383 NIL domain ATY44_20085 PF00892 EamA-like transporter family ATY44_20090 PF04461 Protein of unknown function (DUF520) ATY44_20120 PF13419 Haloacid dehalogenase-like hydrolase ATY44_20125 PF00849 RNA pseudouridylate synthase ATY44_20125 PF01479 S4 domain ATY44_20130 PF08468 Methyltransferase small domain N-terminal ATY44_20130 PF05175 Methyltransferase small domain ATY44_20140 PF07995 Glucose / Sorbosone dehydrogenase ATY44_20150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_20150 PF00512 His Kinase A (phospho-acceptor) domain ATY44_20150 PF00989 PAS fold ATY44_20170 PF00842 Alanine racemase, C-terminal domain ATY44_20170 PF01168 Alanine racemase, N-terminal domain ATY44_20175 PF01266 FAD dependent oxidoreductase ATY44_20180 PF01037 Lrp/AsnC ligand binding domain ATY44_20190 PF01641 SelR domain ATY44_20200 PF01618 MotA/TolQ/ExbB proton channel family ATY44_20205 PF13677 Membrane MotB of proton-channel complex MotA/MotB ATY44_20205 PF00691 OmpA family ATY44_20220 PF00072 Response regulator receiver domain ATY44_20220 PF00486 Transcriptional regulatory protein, C terminal ATY44_20225 PF00512 His Kinase A (phospho-acceptor) domain ATY44_20225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_20225 PF13188 PAS domain ATY44_20225 PF00072 Response regulator receiver domain ATY44_20225 PF08448 PAS fold ATY44_20235 PF00082 Subtilase family ATY44_20235 PF04151 Bacterial pre-peptidase C-terminal domain ATY44_20255 PF01061 ABC-2 type transporter ATY44_20260 PF00005 ABC transporter ATY44_20265 PF00999 Sodium/hydrogen exchanger family ATY44_20280 PF02469 Fasciclin domain ATY44_20285 PF03167 Uracil DNA glycosylase superfamily ATY44_20295 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ATY44_20305 PF03358 NADPH-dependent FMN reductase ATY44_20310 PF00248 Aldo/keto reductase family ATY44_20325 PF01431 Peptidase family M13 ATY44_20325 PF05649 Peptidase family M13 ATY44_20340 PF13520 Amino acid permease ATY44_20350 PF00072 Response regulator receiver domain ATY44_20350 PF04397 LytTr DNA-binding domain ATY44_20355 PF00072 Response regulator receiver domain ATY44_20355 PF04397 LytTr DNA-binding domain ATY44_20360 PF00672 HAMP domain ATY44_20360 PF06580 Histidine kinase ATY44_20360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_20360 PF02743 Cache domain ATY44_20400 PF01527 Transposase ATY44_20410 PF01739 CheR methyltransferase, SAM binding domain ATY44_20410 PF03705 CheR methyltransferase, all-alpha domain ATY44_20410 PF01339 CheB methylesterase ATY44_20410 PF08448 PAS fold ATY44_20425 PF00158 Sigma-54 interaction domain ATY44_20425 PF00072 Response regulator receiver domain ATY44_20425 PF02954 Bacterial regulatory protein, Fis family ATY44_20435 PF01654 Cytochrome bd terminal oxidase subunit I ATY44_20440 PF02322 Cytochrome bd terminal oxidase subunit II ATY44_20450 PF13936 Helix-turn-helix domain ATY44_20450 PF00665 Integrase core domain ATY44_20465 PF01609 Transposase DDE domain ATY44_20465 PF05598 Transposase domain (DUF772) ATY44_20480 PF13593 SBF-like CPA transporter family (DUF4137) ATY44_20490 PF01040 UbiA prenyltransferase family ATY44_20515 PF00510 Cytochrome c oxidase subunit III ATY44_20520 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 ATY44_20525 PF00115 Cytochrome C and Quinol oxidase polypeptide I ATY44_20530 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ATY44_20530 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ATY44_20540 PF00171 Aldehyde dehydrogenase family ATY44_20540 PF01619 Proline dehydrogenase ATY44_20540 PF14850 DNA-binding domain of Proline dehydrogenase ATY44_20540 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ATY44_20545 PF01527 Transposase ATY44_20550 PF13276 HTH-like domain ATY44_20550 PF13683 Integrase core domain ATY44_20560 PF00210 Ferritin-like domain ATY44_20570 PF00293 NUDIX domain ATY44_20585 PF00380 Ribosomal protein S9/S16 ATY44_20590 PF00572 Ribosomal protein L13 ATY44_20595 PF03232 Ubiquinone biosynthesis protein COQ7 ATY44_20600 PF00893 Small Multidrug Resistance protein ATY44_20605 PF02675 S-adenosylmethionine decarboxylase ATY44_20610 PF00027 Cyclic nucleotide-binding domain ATY44_20610 PF00325 Bacterial regulatory proteins, crp family ATY44_20620 PF00218 Indole-3-glycerol phosphate synthase ATY44_20625 PF02885 Glycosyl transferase family, helical bundle domain ATY44_20625 PF00591 Glycosyl transferase family, a/b domain ATY44_20640 PF00117 Glutamine amidotransferase class-I ATY44_20650 PF01527 Transposase ATY44_20655 PF13683 Integrase core domain ATY44_20655 PF13276 HTH-like domain ATY44_20665 PF03971 Monomeric isocitrate dehydrogenase ATY44_20675 PF05598 Transposase domain (DUF772) ATY44_20735 PF00145 C-5 cytosine-specific DNA methylase ATY44_20740 PF03852 DNA mismatch endonuclease Vsr ATY44_20755 PF04610 TrbL/VirB6 plasmid conjugal transfer protein ATY44_20770 PF07996 Type IV secretion system proteins ATY44_20785 PF00589 Phage integrase family ATY44_20800 PF03979 Sigma-70 factor, region 1.1 ATY44_20800 PF04546 Sigma-70, non-essential region ATY44_20800 PF00140 Sigma-70 factor, region 1.2 ATY44_20800 PF04542 Sigma-70 region 2 ATY44_20800 PF04539 Sigma-70 region 3 ATY44_20800 PF04545 Sigma-70, region 4 ATY44_20805 PF02580 D-Tyr-tRNA(Tyr) deacylase ATY44_20810 PF03279 Bacterial lipid A biosynthesis acyltransferase ATY44_20820 PF00925 GTP cyclohydrolase II ATY44_20840 PF00535 Glycosyl transferase family 2 ATY44_20855 PF01029 NusB family ATY44_20855 PF01189 16S rRNA methyltransferase RsmB/F ATY44_20860 PF00551 Formyl transferase ATY44_20860 PF02911 Formyl transferase, C-terminal domain ATY44_20865 PF01327 Polypeptide deformylase ATY44_20870 PF01476 LysM domain ATY44_20875 PF17782 DprA winged helix domain ATY44_20875 PF02481 DNA recombination-mediator protein A ATY44_20880 PF04361 Protein of unknown function (DUF494) ATY44_20885 PF00114 Pilin (bacterial filament) ATY44_20885 PF07963 Prokaryotic N-terminal methylation motif ATY44_20895 PF01131 DNA topoisomerase ATY44_20895 PF01751 Toprim domain ATY44_20895 PF13368 Topoisomerase C-terminal repeat ATY44_20900 PF01300 Telomere recombination ATY44_20925 PF01343 Peptidase family S49 ATY44_20930 PF01554 MatE ATY44_20950 PF18074 Primosomal protein N C-terminal domain ATY44_20950 PF17764 3′ DNA-binding domain (3′BD) ATY44_20950 PF00271 Helicase conserved C-terminal domain ATY44_20950 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ATY44_20950 PF00270 DEAD/DEAH box helicase ATY44_20970 PF03091 CutA1 divalent ion tolerance protein ATY44_20975 PF11412 Disulphide bond corrector protein DsbC ATY44_20975 PF02683 Cytochrome C biogenesis protein transmembrane region ATY44_20985 PF01220 Dehydroquinase class II ATY44_20990 PF00364 Biotin-requiring enzyme ATY44_21000 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ATY44_21000 PF00289 Biotin carboxylase, N-terminal domain ATY44_21000 PF02785 Biotin carboxylase C-terminal domain ATY44_21025 PF01381 Helix-turn-helix ATY44_21035 PF02954 Bacterial regulatory protein, Fis family ATY44_21050 PF05598 Transposase domain (DUF772) ATY44_21065 PF04829 Pre-toxin domain with VENN motif ATY44_21065 PF13332 Hemagglutinin repeat ATY44_21065 PF15605 Bacterial toxin 28 ATY44_21065 PF05860 haemagglutination activity domain ATY44_21070 PF04829 Pre-toxin domain with VENN motif ATY44_21070 PF05860 haemagglutination activity domain ATY44_21070 PF13332 Hemagglutinin repeat ATY44_21070 PF13018 Extended Signal Peptide of Type V secretion system ATY44_21075 PF17287 POTRA domain ATY44_21075 PF08479 POTRA domain, ShlB-type ATY44_21075 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ATY44_21085 PF00818 Ice nucleation protein repeat ATY44_21095 PF00782 Dual specificity phosphatase, catalytic domain ATY44_21100 PF12147 Putative methyltransferase ATY44_21100 PF12146 Serine aminopeptidase, S33 ATY44_21110 PF12146 Serine aminopeptidase, S33 ATY44_21110 PF12147 Putative methyltransferase ATY44_21120 PF02142 MGS-like domain ATY44_21120 PF01808 AICARFT/IMPCHase bienzyme ATY44_21130 PF02844 Phosphoribosylglycinamide synthetase, N domain ATY44_21130 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATY44_21130 PF02843 Phosphoribosylglycinamide synthetase, C domain ATY44_21135 PF00005 ABC transporter ATY44_21135 PF12704 MacB-like periplasmic core domain ATY44_21135 PF02687 FtsX-like permease family ATY44_21145 PF12805 FUSC-like inner membrane protein yccS ATY44_21160 PF07690 Major Facilitator Superfamily ATY44_21180 PF17113 Regulatory signalling modulator protein AmpE ATY44_21180 PF03186 CobD/Cbib protein ATY44_21185 PF00293 NUDIX domain ATY44_21185 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain ATY44_21185 PF09297 NADH pyrophosphatase zinc ribbon domain ATY44_21195 PF01521 Iron-sulphur cluster biosynthesis ATY44_21220 PF00072 Response regulator receiver domain ATY44_21220 PF00486 Transcriptional regulatory protein, C terminal ATY44_21225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_21225 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ATY44_21225 PF01627 Hpt domain ATY44_21225 PF00512 His Kinase A (phospho-acceptor) domain ATY44_21225 PF00672 HAMP domain ATY44_21225 PF00072 Response regulator receiver domain ATY44_21230 PF01527 Transposase ATY44_21265 PF00579 tRNA synthetases class I (W and Y) ATY44_21270 PF04225 Opacity-associated protein A LysM-like domain ATY44_21270 PF01551 Peptidase family M23 ATY44_21275 PF03702 Anhydro-N-acetylmuramic acid kinase ATY44_21285 PF07690 Major Facilitator Superfamily ATY44_21290 PF03372 Endonuclease/Exonuclease/phosphatase family ATY44_21295 PF00156 Phosphoribosyl transferase domain ATY44_21305 PF13614 AAA domain ATY44_21310 PF02195 ParB-like nuclease domain ATY44_21310 PF17762 HTH domain found in ParB protein ATY44_21320 PF01370 NAD dependent epimerase/dehydratase family ATY44_21325 PF00535 Glycosyl transferase family 2 ATY44_21340 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ATY44_21340 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ATY44_21340 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ATY44_21340 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ATY44_21345 PF00692 dUTPase ATY44_21350 PF02441 Flavoprotein ATY44_21350 PF04127 DNA / pantothenate metabolism flavoprotein ATY44_21355 PF04002 RadC-like JAB domain ATY44_21360 PF00750 tRNA synthetases class I (R) ATY44_21360 PF05746 DALR anticodon binding domain ATY44_21360 PF03485 Arginyl tRNA synthetase N terminal domain ATY44_21375 PF00106 short chain dehydrogenase ATY44_21380 PF00665 Integrase core domain ATY44_21380 PF13936 Helix-turn-helix domain ATY44_21390 PF01614 Bacterial transcriptional regulator ATY44_21390 PF09339 IclR helix-turn-helix domain ATY44_21400 PF02627 Carboxymuconolactone decarboxylase family ATY44_21405 PF12146 Serine aminopeptidase, S33 ATY44_21410 PF10397 Adenylosuccinate lyase C-terminus ATY44_21410 PF00206 Lyase ATY44_21420 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal ATY44_21420 PF00775 Dioxygenase ATY44_21425 PF00108 Thiolase, N-terminal domain ATY44_21425 PF02803 Thiolase, C-terminal domain ATY44_21440 PF01527 Transposase ATY44_21465 PF00268 Ribonucleotide reductase, small chain ATY44_21470 PF03477 ATP cone domain ATY44_21470 PF02867 Ribonucleotide reductase, barrel domain ATY44_21470 PF00317 Ribonucleotide reductase, all-alpha domain ATY44_21480 PF13607 Succinyl-CoA ligase like flavodoxin domain ATY44_21480 PF13380 CoA binding domain ATY44_21480 PF00583 Acetyltransferase (GNAT) family ATY44_21490 PF03448 MgtE intracellular N domain ATY44_21490 PF00571 CBS domain ATY44_21490 PF01769 Divalent cation transporter ATY44_21495 PF00999 Sodium/hydrogen exchanger family ATY44_21495 PF02254 TrkA-N domain ATY44_21505 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ATY44_21505 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ATY44_21510 PF00723 Glycosyl hydrolases family 15 ATY44_21525 PF05166 YcgL domain ATY44_21530 PF02801 Beta-ketoacyl synthase, C-terminal domain ATY44_21530 PF00109 Beta-ketoacyl synthase, N-terminal domain ATY44_21540 PF00535 Glycosyl transferase family 2 ATY44_21565 PF00155 Aminotransferase class I and II ATY44_21570 PF06968 Biotin and Thiamin Synthesis associated domain ATY44_21570 PF04055 Radical SAM superfamily ATY44_21580 PF01040 UbiA prenyltransferase family ATY44_21590 PF01594 AI-2E family transporter ATY44_21600 PF00883 Cytosol aminopeptidase family, catalytic domain ATY44_21600 PF02789 Cytosol aminopeptidase family, N-terminal domain ATY44_21610 PF08281 Sigma-70, region 4 ATY44_21610 PF04542 Sigma-70 region 2 ATY44_21615 PF00199 Catalase ATY44_21635 PF00892 EamA-like transporter family ATY44_21660 PF00753 Metallo-beta-lactamase superfamily ATY44_21665 PF00579 tRNA synthetases class I (W and Y) ATY44_21670 PF05532 CsbD-like ATY44_21685 PF00491 Arginase family ATY44_21705 PF02223 Thymidylate kinase ATY44_21720 PF03309 Type III pantothenate kinase ATY44_21725 PF02237 Biotin protein ligase C terminal domain ATY44_21725 PF03099 Biotin/lipoate A/B protein ligase family ATY44_21725 PF08279 HTH domain ATY44_21750 PF00672 HAMP domain ATY44_21750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_21750 PF00512 His Kinase A (phospho-acceptor) domain ATY44_21755 PF00486 Transcriptional regulatory protein, C terminal ATY44_21755 PF00072 Response regulator receiver domain ATY44_21765 PF01207 Dihydrouridine synthase (Dus) ATY44_21785 PF06628 Catalase-related immune-responsive ATY44_21785 PF00199 Catalase ATY44_21790 PF13533 Biotin-lipoyl like ATY44_21810 PF01609 Transposase DDE domain ATY44_21810 PF05598 Transposase domain (DUF772) ATY44_21815 PF13307 Helicase C-terminal domain ATY44_21815 PF06733 DEAD_2 ATY44_21825 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ATY44_21825 PF01488 Shikimate / quinate 5-dehydrogenase ATY44_21825 PF08501 Shikimate dehydrogenase substrate binding domain ATY44_21835 PF00175 Oxidoreductase NAD-binding domain ATY44_21835 PF00258 Flavodoxin ATY44_21835 PF00667 FAD binding domain ATY44_21845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY44_21845 PF03466 LysR substrate binding domain ATY44_21855 PF00490 Delta-aminolevulinic acid dehydratase ATY44_21875 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ATY44_21875 PF00326 Prolyl oligopeptidase family ATY44_21880 PF00043 Glutathione S-transferase, C-terminal domain ATY44_21880 PF02798 Glutathione S-transferase, N-terminal domain ATY44_21900 PF04820 Tryptophan halogenase ATY44_21915 PF00005 ABC transporter ATY44_21925 PF01381 Helix-turn-helix ATY44_21935 PF02583 Metal-sensitive transcriptional repressor ATY44_21940 PF01545 Cation efflux family ATY44_21945 PF00111 2Fe-2S iron-sulfur cluster binding domain ATY44_21945 PF00970 Oxidoreductase FAD-binding domain ATY44_21945 PF00175 Oxidoreductase NAD-binding domain ATY44_21950 PF00005 ABC transporter ATY44_21955 PF01061 ABC-2 type transporter ATY44_21965 PF08546 Ketopantoate reductase PanE/ApbA C terminal ATY44_21965 PF02558 Ketopantoate reductase PanE/ApbA ATY44_22000 PF13683 Integrase core domain ATY44_22000 PF13276 HTH-like domain ATY44_22005 PF01527 Transposase ATY44_22015 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_22045 PF07478 D-ala D-ala ligase C-terminus ATY44_22045 PF01820 D-ala D-ala ligase N-terminus ATY44_22060 PF03109 ABC1 family ATY44_22070 PF00849 RNA pseudouridylate synthase ATY44_22080 PF00472 RF-1 domain ATY44_22095 PF01432 Peptidase family M3 ATY44_22120 PF05336 L-rhamnose mutarotase ATY44_22125 PF07690 Major Facilitator Superfamily ATY44_22130 PF01614 Bacterial transcriptional regulator ATY44_22130 PF09339 IclR helix-turn-helix domain ATY44_22140 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_22145 PF02659 Putative manganese efflux pump ATY44_22150 PF00512 His Kinase A (phospho-acceptor) domain ATY44_22150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY44_22165 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain ATY44_22165 PF06165 Glycosyltransferase family 36 ATY44_22180 PF01011 PQQ enzyme repeat ATY44_22180 PF13360 PQQ-like domain ATY44_22180 PF13570 PQQ-like domain ATY44_22200 PF01527 Transposase ATY44_22205 PF13276 HTH-like domain ATY44_22205 PF13683 Integrase core domain ATY44_22230 PF05598 Transposase domain (DUF772) ATY44_22230 PF01609 Transposase DDE domain ATY44_22285 PF00005 ABC transporter ATY44_22290 PF02405 Permease MlaE ATY44_22295 PF02470 MlaD protein ATY44_22300 PF05494 MlaC protein ATY44_22310 PF04333 MlaA lipoprotein ATY44_22320 PF05598 Transposase domain (DUF772) ATY44_22330 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_22340 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ATY44_22340 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ATY44_22340 PF06827 Zinc finger found in FPG and IleRS ATY44_22350 PF01527 Transposase ATY44_22385 PF03594 Benzoate membrane transport protein ATY44_22390 PF03594 Benzoate membrane transport protein ATY44_22395 PF00360 Phytochrome region ATY44_22395 PF01590 GAF domain ATY44_22395 PF08446 PAS fold ATY44_22395 PF13426 PAS domain ATY44_22400 PF01126 Heme oxygenase ATY44_22405 PF07690 Major Facilitator Superfamily ATY44_22410 PF01263 Aldose 1-epimerase ATY44_22420 PF02810 SEC-C motif ATY44_22430 PF00150 Cellulase (glycosyl hydrolase family 5) ATY44_22435 PF00150 Cellulase (glycosyl hydrolase family 5) ATY44_22440 PF00150 Cellulase (glycosyl hydrolase family 5) ATY44_22445 PF00107 Zinc-binding dehydrogenase ATY44_22445 PF08240 Alcohol dehydrogenase GroES-like domain ATY44_22480 PF05598 Transposase domain (DUF772) ATY44_22490 PF07715 TonB-dependent Receptor Plug Domain ATY44_22490 PF00593 TonB dependent receptor ATY44_22495 PF00593 TonB dependent receptor ATY44_22495 PF07715 TonB-dependent Receptor Plug Domain ATY44_22515 PF01037 Lrp/AsnC ligand binding domain ATY44_22520 PF00351 Biopterin-dependent aromatic amino acid hydroxylase ATY44_22530 PF00657 GDSL-like Lipase/Acylhydrolase ATY44_22545 PF01527 Transposase ATY44_22560 PF00248 Aldo/keto reductase family ATY44_22565 PF16884 N-terminal domain of oxidoreductase ATY44_22565 PF00107 Zinc-binding dehydrogenase ATY44_22570 PF00248 Aldo/keto reductase family ATY44_22580 PF00849 RNA pseudouridylate synthase ATY44_22595 PF00271 Helicase conserved C-terminal domain ATY44_22595 PF00270 DEAD/DEAH box helicase ATY44_22595 PF04408 Helicase associated domain (HA2) ATY44_22595 PF08482 ATP-dependent helicase C-terminal ATY44_22600 PF07308 Protein of unknown function (DUF1456) ATY44_22605 PF13378 Enolase C-terminal domain-like ATY44_22605 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ATY44_22610 PF01557 Fumarylacetoacetate (FAA) hydrolase family ATY44_22625 PF00248 Aldo/keto reductase family ATY44_22635 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain ATY44_22635 PF04616 Glycosyl hydrolases family 43 ATY44_22655 PF00196 Bacterial regulatory proteins, luxR family ATY44_22655 PF00072 Response regulator receiver domain ATY44_22660 PF00501 AMP-binding enzyme ATY44_22660 PF16177 Acetyl-coenzyme A synthetase N-terminus ATY44_22660 PF13193 AMP-binding enzyme C-terminal domain ATY44_22675 PF04341 Protein of unknown function, DUF485 ATY44_22680 PF00474 Sodium:solute symporter family ATY44_22690 PF03372 Endonuclease/Exonuclease/phosphatase family ATY44_22700 PF04226 Transglycosylase associated protein ATY44_22705 PF01648 4'-phosphopantetheinyl transferase superfamily ATY44_22710 PF16655 PhoD-like phosphatase, N-terminal domain ATY44_22710 PF09423 PhoD-like phosphatase ATY44_22715 PF09423 PhoD-like phosphatase ATY44_22715 PF16655 PhoD-like phosphatase, N-terminal domain ATY44_22720 PF02527 rRNA small subunit methyltransferase G ATY44_22730 PF00830 Ribosomal L28 family ATY44_22735 PF00471 Ribosomal protein L33 ATY44_22740 PF04909 Amidohydrolase ATY44_22745 PF04303 PrpF protein ATY44_22750 PF03737 Aldolase/RraA ATY44_22755 PF03466 LysR substrate binding domain ATY44_22755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY44_22760 PF13091 PLD-like domain ATY44_22760 PF13396 Phospholipase_D-nuclease N-terminal ATY44_22775 PF13361 UvrD-like helicase C-terminal domain ATY44_22775 PF00580 UvrD/REP helicase N-terminal domain ATY44_22790 PF13520 Amino acid permease ATY44_22795 PF02646 RmuC family ATY44_22805 PF00255 Glutathione peroxidase ATY44_22810 PF05598 Transposase domain (DUF772) ATY44_22820 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY44_22825 PF04055 Radical SAM superfamily ATY44_22835 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ATY44_22850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ATY44_22850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATY44_22855 PF13180 PDZ domain ATY44_22855 PF03572 Peptidase family S41 ATY44_22860 PF01551 Peptidase family M23 ATY44_22870 PF04389 Peptidase family M28 ATY44_22885 PF05598 Transposase domain (DUF772) ATY44_22920 PF02463 RecF/RecN/SMC N terminal domain ATY44_22925 PF01227 GTP cyclohydrolase I ATY44_22945 PF00083 Sugar (and other) transporter ATY44_22980 PF05598 Transposase domain (DUF772) ATY44_23030 PF02595 Glycerate kinase family ATY44_23035 PF07690 Major Facilitator Superfamily ATY44_23050 PF10672 S-adenosylmethionine-dependent methyltransferase ATY44_23050 PF17785 PUA-like domain ATY44_23055 PF03741 Integral membrane protein TerC family ATY44_23060 PF01694 Rhomboid family ATY44_23065 PF03009 Glycerophosphoryl diester phosphodiesterase family ATY44_23075 PF01569 PAP2 superfamily ATY44_23080 PF01926 50S ribosome-binding GTPase ATY44_23080 PF12631 MnmE helical domain ATY44_23080 PF10396 GTP-binding protein TrmE N-terminus ATY44_23085 PF01522 Polysaccharide deacetylase ATY44_23090 PF02096 60Kd inner membrane protein ATY44_23090 PF14849 YidC periplasmic domain ATY44_23095 PF00825 Ribonuclease P ATY44_23100 PF00468 Ribosomal protein L34