ATY44_00080	PWY-5484	glycolysis II (from fructose 6-phosphate)
ATY44_00085	PWY-5913	TCA cycle VI (obligate autotrophs)
ATY44_00085	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
ATY44_00085	PWY-6638	sulfolactate degradation III
ATY44_00085	PWY-6642	(<i>R</i>)-cysteate degradation
ATY44_00085	PWY-6643	coenzyme M biosynthesis II
ATY44_00085	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
ATY44_00085	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
ATY44_00085	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
ATY44_00110	PWY-6825	phosphatidylcholine biosynthesis V
ATY44_00125	PWY-5971	palmitate biosynthesis II (bacteria and plants)
ATY44_00125	PWY-5973	<i>cis</i>-vaccenate biosynthesis
ATY44_00125	PWY-5989	stearate biosynthesis II (bacteria and plants)
ATY44_00125	PWY-6113	superpathway of mycolate biosynthesis
ATY44_00125	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
ATY44_00125	PWY-6519	8-amino-7-oxononanoate biosynthesis I
ATY44_00125	PWY-7663	gondoate biosynthesis (anaerobic)
ATY44_00125	PWY-7664	oleate biosynthesis IV (anaerobic)
ATY44_00125	PWY-7858	ATY44_00125
ATY44_00125	PWYG-321	mycolate biosynthesis
ATY44_00400	PWY-7980	ATY44_00400
ATY44_00500	PWY-622	starch biosynthesis
ATY44_00505	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
ATY44_00505	PWY-622	starch biosynthesis
ATY44_00505	PWY-7900	ATY44_00505
ATY44_00510	PWY-2661	trehalose biosynthesis V
ATY44_00515	PWY-5941	glycogen degradation II (eukaryotic)
ATY44_00515	PWY-6724	starch degradation II
ATY44_00515	PWY-6737	starch degradation V
ATY44_00515	PWY-7238	sucrose biosynthesis II
ATY44_00520	PWY-2661	trehalose biosynthesis V
ATY44_00835	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
ATY44_00840	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
ATY44_00865	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
ATY44_00865	PWY-622	starch biosynthesis
ATY44_00865	PWY-7900	ATY44_00865
ATY44_00870	PWY-2622	trehalose biosynthesis IV
ATY44_00870	PWY-7900	ATY44_00870
ATY44_00875	PWY-7900	ATY44_00875
ATY44_00935	PWY-7437	protein <i>O</i>-[<i>N</i>-acetyl]-glucosylation
ATY44_00960	PWY-40	putrescine biosynthesis I
ATY44_00960	PWY-43	putrescine biosynthesis II
ATY44_00960	PWY-6305	putrescine biosynthesis IV
ATY44_00960	PWY-6834	spermidine biosynthesis III
ATY44_01025	PWY-6519	8-amino-7-oxononanoate biosynthesis I
ATY44_01035	PWY-6519	8-amino-7-oxononanoate biosynthesis I
ATY44_01065	PWY-7199	pyrimidine deoxyribonucleosides salvage
ATY44_01095	PWY-5686	UMP biosynthesis
ATY44_01095	PWY-7790	ATY44_01095
ATY44_01095	PWY-7791	ATY44_01095
ATY44_01125	PWY-5667	CDP-diacylglycerol biosynthesis I
ATY44_01125	PWY-6453	stigma estolide biosynthesis
ATY44_01125	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
ATY44_01125	PWY-7587	oleate biosynthesis III (cyanobacteria)
ATY44_01240	PWY-7255	ergothioneine biosynthesis I (bacteria)
ATY44_01245	PWY-7255	ergothioneine biosynthesis I (bacteria)
ATY44_01245	PWY-7550	ergothioneine biosynthesis II (fungi)
ATY44_01335	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
ATY44_01340	PWY-381	nitrate reduction II (assimilatory)
ATY44_01340	PWY-5675	nitrate reduction V (assimilatory)
ATY44_01340	PWY-6549	L-glutamine biosynthesis III
ATY44_01340	PWY-6963	ammonia assimilation cycle I
ATY44_01340	PWY-6964	ammonia assimilation cycle II
ATY44_01365	PWY-6854	ethylene biosynthesis III (microbes)
ATY44_01370	PWY-6854	ethylene biosynthesis III (microbes)
ATY44_01630	PWY-6717	(1,4)-&beta;-xylan degradation
ATY44_01630	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
ATY44_01635	PWY-6717	(1,4)-&beta;-xylan degradation
ATY44_01635	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
ATY44_01640	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
ATY44_01640	PWY-7248	pectin degradation III
ATY44_01660	PWY-6531	mannitol cycle
ATY44_01680	PWY-6807	xyloglucan degradation II (exoglucanase)
ATY44_01890	PWY-4381	fatty acid biosynthesis initiation I
ATY44_01890	PWY-5743	3-hydroxypropanoate cycle
ATY44_01890	PWY-5744	glyoxylate assimilation
ATY44_01890	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
ATY44_01890	PWY-6722	candicidin biosynthesis
ATY44_01945	PWY-5691	urate degradation to allantoin I
ATY44_01945	PWY-7394	urate degradation to allantoin II
ATY44_01945	PWY-7849	ATY44_01945
ATY44_01960	PWY-6832	2-aminoethylphosphonate degradation II
ATY44_02045	PWY-2201	folate transformations I
ATY44_02045	PWY-5497	purine nucleobases degradation II (anaerobic)
ATY44_02045	PWY-7909	ATY44_02045
ATY44_02065	PWY-2201	folate transformations I
ATY44_02065	PWY-3841	folate transformations II
ATY44_02070	PWY-6700	queuosine biosynthesis
ATY44_02090	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
ATY44_02090	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
ATY44_02090	PWY-6936	seleno-amino acid biosynthesis
ATY44_02090	PWY-702	L-methionine biosynthesis II
ATY44_02115	PWY-6825	phosphatidylcholine biosynthesis V
ATY44_02185	PWY-5667	CDP-diacylglycerol biosynthesis I
ATY44_02185	PWY-5981	CDP-diacylglycerol biosynthesis III
ATY44_02185	PWY-6453	stigma estolide biosynthesis
ATY44_02185	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
ATY44_02185	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
ATY44_02185	PWY-7587	oleate biosynthesis III (cyanobacteria)
ATY44_02185	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
ATY44_02185	PWY-7782	ATY44_02185
ATY44_02190	PWY-5971	palmitate biosynthesis II (bacteria and plants)
ATY44_02190	PWY-5973	<i>cis</i>-vaccenate biosynthesis
ATY44_02190	PWY-5989	stearate biosynthesis II (bacteria and plants)
ATY44_02190	PWY-5994	palmitate biosynthesis I (animals and fungi)
ATY44_02190	PWY-6113	superpathway of mycolate biosynthesis
ATY44_02190	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
ATY44_02190	PWY-6519	8-amino-7-oxononanoate biosynthesis I
ATY44_02190	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
ATY44_02190	PWY-7663	gondoate biosynthesis (anaerobic)
ATY44_02190	PWY-7664	oleate biosynthesis IV (anaerobic)
ATY44_02190	PWY-7858	ATY44_02190
ATY44_02190	PWYG-321	mycolate biosynthesis
ATY44_02250	PWY-7980	ATY44_02250
ATY44_02345	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
ATY44_02345	PWY-6164	3-dehydroquinate biosynthesis I
ATY44_02345	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
ATY44_02520	PWY-6891	thiazole biosynthesis II (Bacillus)
ATY44_02520	PWY-6892	thiazole biosynthesis I (E. coli)
ATY44_02520	PWY-7560	methylerythritol phosphate pathway II
ATY44_02565	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
ATY44_02600	PWY-5101	L-isoleucine biosynthesis II
ATY44_02600	PWY-5103	L-isoleucine biosynthesis III
ATY44_02600	PWY-5104	L-isoleucine biosynthesis IV
ATY44_02600	PWY-7111	pyruvate fermentation to isobutanol (engineered)
ATY44_02675	PWY-4381	fatty acid biosynthesis initiation I
ATY44_02730	PWY-5667	CDP-diacylglycerol biosynthesis I
ATY44_02730	PWY-5981	CDP-diacylglycerol biosynthesis III
ATY44_02730	PWY-7902	ATY44_02730
ATY44_02795	PWY-6700	queuosine biosynthesis
ATY44_02935	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
ATY44_02935	PWY-6148	tetrahydromethanopterin biosynthesis
ATY44_02935	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
ATY44_02935	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
ATY44_03075	PWY-6454	vancomycin resistance I
ATY44_03075	PWY-6455	vancomycin resistance II
ATY44_03140	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
ATY44_03140	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
ATY44_03290	PWY-6123	inosine-5'-phosphate biosynthesis I
ATY44_03290	PWY-6124	inosine-5'-phosphate biosynthesis II
ATY44_03290	PWY-7234	inosine-5'-phosphate biosynthesis III
ATY44_03300	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
ATY44_03300	PWY-5723	Rubisco shunt
ATY44_03315	PWY-5958	acridone alkaloid biosynthesis
ATY44_03315	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
ATY44_03315	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
ATY44_03395	PWY-7892	ATY44_03395
ATY44_03565	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
ATY44_03565	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
ATY44_03620	PWY-2941	L-lysine biosynthesis II
ATY44_03620	PWY-5097	L-lysine biosynthesis VI
ATY44_03665	PWY-5839	menaquinol-7 biosynthesis
ATY44_03665	PWY-5844	menaquinol-9 biosynthesis
ATY44_03665	PWY-5849	menaquinol-6 biosynthesis
ATY44_03665	PWY-5890	menaquinol-10 biosynthesis
ATY44_03665	PWY-5891	menaquinol-11 biosynthesis
ATY44_03665	PWY-5892	menaquinol-12 biosynthesis
ATY44_03665	PWY-5895	menaquinol-13 biosynthesis
ATY44_03740	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ATY44_03740	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ATY44_03745	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ATY44_03745	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
ATY44_03745	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
ATY44_03745	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ATY44_03815	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ATY44_03815	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ATY44_03830	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
ATY44_03830	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
ATY44_03835	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
ATY44_03835	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
ATY44_03855	PWY-5381	pyridine nucleotide cycling (plants)
ATY44_03920	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
ATY44_03920	PWY-6148	tetrahydromethanopterin biosynthesis
ATY44_03920	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
ATY44_03920	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
ATY44_03920	PWY-7852	ATY44_03920
ATY44_03920	PWY-7853	ATY44_03920
ATY44_03995	PWY-6906	chitin derivatives degradation
ATY44_03995	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
ATY44_03995	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
ATY44_04160	PWY-6840	homoglutathione biosynthesis
ATY44_04160	PWY-7255	ergothioneine biosynthesis I (bacteria)
ATY44_04220	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
ATY44_04220	PWY-3162	L-tryptophan degradation V (side chain pathway)
ATY44_04220	PWY-5057	L-valine degradation II
ATY44_04220	PWY-5076	L-leucine degradation III
ATY44_04220	PWY-5078	L-isoleucine degradation II
ATY44_04220	PWY-5079	L-phenylalanine degradation III
ATY44_04220	PWY-5082	L-methionine degradation III
ATY44_04220	PWY-5480	pyruvate fermentation to ethanol I
ATY44_04220	PWY-5486	pyruvate fermentation to ethanol II
ATY44_04220	PWY-5751	phenylethanol biosynthesis
ATY44_04220	PWY-6313	serotonin degradation
ATY44_04220	PWY-6333	acetaldehyde biosynthesis I
ATY44_04220	PWY-6342	noradrenaline and adrenaline degradation
ATY44_04220	PWY-6587	pyruvate fermentation to ethanol III
ATY44_04220	PWY-6802	salidroside biosynthesis
ATY44_04220	PWY-6871	3-methylbutanol biosynthesis
ATY44_04220	PWY-7013	L-1,2-propanediol degradation
ATY44_04220	PWY-7111	pyruvate fermentation to isobutanol (engineered)
ATY44_04220	PWY-7118	chitin degradation to ethanol
ATY44_04220	PWY-7396	butanol and isobutanol biosynthesis (engineered)
ATY44_04220	PWY-7798	ATY44_04220
ATY44_04230	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
ATY44_04270	PWY-1622	formaldehyde assimilation I (serine pathway)
ATY44_04270	PWY-181	photorespiration
ATY44_04270	PWY-2161	folate polyglutamylation
ATY44_04270	PWY-2201	folate transformations I
ATY44_04270	PWY-3661	glycine betaine degradation I
ATY44_04270	PWY-3661-1	glycine betaine degradation II (mammalian)
ATY44_04270	PWY-3841	folate transformations II
ATY44_04270	PWY-5497	purine nucleobases degradation II (anaerobic)
ATY44_04290	PWY-7991	ATY44_04290
ATY44_04300	PWY-6167	flavin biosynthesis II (archaea)
ATY44_04300	PWY-6168	flavin biosynthesis III (fungi)
ATY44_04300	PWY-7980	ATY44_04300
ATY44_04305	PWY-6167	flavin biosynthesis II (archaea)
ATY44_04305	PWY-6168	flavin biosynthesis III (fungi)
ATY44_04305	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
ATY44_04305	PWY-7991	ATY44_04305
ATY44_04310	PWY-6167	flavin biosynthesis II (archaea)
ATY44_04310	PWY-6168	flavin biosynthesis III (fungi)
ATY44_04320	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
ATY44_04320	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
ATY44_04320	PWY-6896	thiamin salvage I
ATY44_04320	PWY-6897	thiamin salvage II
ATY44_04420	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ATY44_04420	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ATY44_04430	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ATY44_04430	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ATY44_04430	PWY-7953	ATY44_04430
ATY44_04435	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ATY44_04435	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
ATY44_04435	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ATY44_04440	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ATY44_04440	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
ATY44_04440	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
ATY44_04440	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ATY44_04445	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ATY44_04445	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
ATY44_04445	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
ATY44_04445	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ATY44_04450	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ATY44_04450	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ATY44_04450	PWY-7953	ATY44_04450
ATY44_04455	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ATY44_04455	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ATY44_04455	PWY-7953	ATY44_04455
ATY44_04500	PWY-6502	oxidized GTP and dGTP detoxification
ATY44_04500	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
ATY44_04500	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
ATY44_04500	PWY-6897	thiamin salvage II
ATY44_04500	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
ATY44_04500	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
ATY44_04500	PWY-7356	thiamin salvage IV (yeast)
ATY44_04500	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
ATY44_04515	PWY-2201	folate transformations I
ATY44_04515	PWY-3841	folate transformations II
ATY44_04580	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
ATY44_04590	PWY-1622	formaldehyde assimilation I (serine pathway)
ATY44_04590	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
ATY44_04590	PWY-5913	TCA cycle VI (obligate autotrophs)
ATY44_04590	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ATY44_04590	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
ATY44_04590	PWY-6549	L-glutamine biosynthesis III
ATY44_04590	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
ATY44_04590	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
ATY44_04590	PWY-7124	ethylene biosynthesis V (engineered)
ATY44_04615	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
ATY44_04615	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
ATY44_04750	PWY-7039	phosphatidate metabolism, as a signaling molecule
ATY44_04750	PWY-7817	ATY44_04750
ATY44_04775	PWY-3841	folate transformations II
ATY44_04775	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
ATY44_04775	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
ATY44_04775	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
ATY44_04775	PWY-7199	pyrimidine deoxyribonucleosides salvage
ATY44_04775	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
ATY44_04785	PWY-3841	folate transformations II
ATY44_04785	PWY-6614	tetrahydrofolate biosynthesis
ATY44_04920	PWY-5530	sorbitol biosynthesis II
ATY44_05065	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
ATY44_05065	PWY-5723	Rubisco shunt
ATY44_05195	PWY-5057	L-valine degradation II
ATY44_05195	PWY-5076	L-leucine degradation III
ATY44_05195	PWY-5078	L-isoleucine degradation II
ATY44_05195	PWY-5101	L-isoleucine biosynthesis II
ATY44_05195	PWY-5103	L-isoleucine biosynthesis III
ATY44_05195	PWY-5104	L-isoleucine biosynthesis IV
ATY44_05195	PWY-5108	L-isoleucine biosynthesis V
ATY44_05195	PWY-7767	ATY44_05195
ATY44_05235	PWY-7731	ATY44_05235
ATY44_05270	PWY-7437	protein <i>O</i>-[<i>N</i>-acetyl]-glucosylation
ATY44_05280	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
ATY44_05295	PWY-7560	methylerythritol phosphate pathway II
ATY44_05315	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
ATY44_06370	PWY-1042	glycolysis IV (plant cytosol)
ATY44_06370	PWY-5484	glycolysis II (from fructose 6-phosphate)
ATY44_06370	PWY-6886	1-butanol autotrophic biosynthesis
ATY44_06370	PWY-6901	superpathway of glucose and xylose degradation
ATY44_06370	PWY-7003	glycerol degradation to butanol
ATY44_06380	PWY-1042	glycolysis IV (plant cytosol)
ATY44_06380	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
ATY44_06380	PWY-5484	glycolysis II (from fructose 6-phosphate)
ATY44_06380	PWY-5723	Rubisco shunt
ATY44_06380	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ATY44_06380	PWY-6886	1-butanol autotrophic biosynthesis
ATY44_06380	PWY-6901	superpathway of glucose and xylose degradation
ATY44_06380	PWY-7003	glycerol degradation to butanol
ATY44_06380	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
ATY44_06380	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
ATY44_06385	PWY-1042	glycolysis IV (plant cytosol)
ATY44_06385	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
ATY44_06385	PWY-5484	glycolysis II (from fructose 6-phosphate)
ATY44_06385	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ATY44_06385	PWY-7385	1,3-propanediol biosynthesis (engineered)
ATY44_06395	PWY-6825	phosphatidylcholine biosynthesis V
ATY44_06405	PWY-6936	seleno-amino acid biosynthesis
ATY44_06410	PWY-5194	siroheme biosynthesis
ATY44_06410	PWY-5196	factor 430 biosynthesis
ATY44_06410	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
ATY44_06450	PWY-6683	sulfate reduction III (assimilatory)
ATY44_06455	PWY-6683	sulfate reduction III (assimilatory)
ATY44_06460	PWY-5278	sulfite oxidation III
ATY44_06460	PWY-5340	sulfate activation for sulfonation
ATY44_06460	PWY-6683	sulfate reduction III (assimilatory)
ATY44_06460	PWY-6932	selenate reduction
ATY44_06465	PWY-5278	sulfite oxidation III
ATY44_06465	PWY-5340	sulfate activation for sulfonation
ATY44_06465	PWY-6683	sulfate reduction III (assimilatory)
ATY44_06465	PWY-6932	selenate reduction
ATY44_06595	PWY-6891	thiazole biosynthesis II (Bacillus)
ATY44_06595	PWY-6892	thiazole biosynthesis I (E. coli)
ATY44_06805	PWY-5381	pyridine nucleotide cycling (plants)
ATY44_06805	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
ATY44_06805	PWY-7761	ATY44_06805
ATY44_06935	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
ATY44_06935	PWY-5491	diethylphosphate degradation
ATY44_07075	PWY-5669	phosphatidylethanolamine biosynthesis I
ATY44_07090	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
ATY44_07100	PWY-2941	L-lysine biosynthesis II
ATY44_07100	PWY-2942	L-lysine biosynthesis III
ATY44_07100	PWY-5097	L-lysine biosynthesis VI
ATY44_07100	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ATY44_07100	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
ATY44_07100	PWY-6559	spermidine biosynthesis II
ATY44_07100	PWY-6562	norspermidine biosynthesis
ATY44_07100	PWY-7153	grixazone biosynthesis
ATY44_07100	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
ATY44_07100	PWY-7977	ATY44_07100
ATY44_07145	PWY-4381	fatty acid biosynthesis initiation I
ATY44_07145	PWY-5743	3-hydroxypropanoate cycle
ATY44_07145	PWY-5744	glyoxylate assimilation
ATY44_07145	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
ATY44_07145	PWY-6722	candicidin biosynthesis
ATY44_07150	PWY-6749	CMP-legionaminate biosynthesis I
ATY44_07195	PWY-1042	glycolysis IV (plant cytosol)
ATY44_07195	PWY-5484	glycolysis II (from fructose 6-phosphate)
ATY44_07195	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ATY44_07195	PWY-7003	glycerol degradation to butanol
ATY44_07325	PWY-5316	nicotine biosynthesis
ATY44_07325	PWY-5381	pyridine nucleotide cycling (plants)
ATY44_07325	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
ATY44_07325	PWY-7342	superpathway of nicotine biosynthesis
ATY44_07335	PWY-6123	inosine-5'-phosphate biosynthesis I
ATY44_07335	PWY-7234	inosine-5'-phosphate biosynthesis III
ATY44_07345	PWY-6854	ethylene biosynthesis III (microbes)
ATY44_07370	PWY-6617	adenosine nucleotides degradation III
ATY44_07370	PWY-7569	arginomycin biosynthesis
ATY44_07370	PWY-7570	blasticidin S biosynthesis
ATY44_07510	PWY-6655	xanthan biosynthesis
ATY44_07510	PWY-6658	acetan biosynthesis
ATY44_07885	PWY-6823	molybdenum cofactor biosynthesis
ATY44_07915	PWY-5194	siroheme biosynthesis
ATY44_07915	PWY-5196	factor 430 biosynthesis
ATY44_07915	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
ATY44_07975	PWY-6012	acyl carrier protein metabolism I
ATY44_07975	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
ATY44_07975	PWY-6289	petrobactin biosynthesis
ATY44_08055	PWY-7158	L-phenylalanine degradation V
ATY44_08430	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
ATY44_08430	PWY-7688	ATY44_08430
ATY44_08445	PWY-6519	8-amino-7-oxononanoate biosynthesis I
ATY44_08445	PWY-6578	8-amino-7-oxononanoate biosynthesis III
ATY44_08445	PWY-7147	8-amino-7-oxononanoate biosynthesis II
ATY44_08585	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
ATY44_08585	PWY-7177	UTP and CTP dephosphorylation II
ATY44_08585	PWY-7185	UTP and CTP dephosphorylation I
ATY44_08590	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
ATY44_08590	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
ATY44_08600	PWY-1042	glycolysis IV (plant cytosol)
ATY44_08600	PWY-1622	formaldehyde assimilation I (serine pathway)
ATY44_08600	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
ATY44_08600	PWY-5484	glycolysis II (from fructose 6-phosphate)
ATY44_08600	PWY-5723	Rubisco shunt
ATY44_08600	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ATY44_08600	PWY-6886	1-butanol autotrophic biosynthesis
ATY44_08600	PWY-6901	superpathway of glucose and xylose degradation
ATY44_08600	PWY-7003	glycerol degradation to butanol
ATY44_08600	PWY-7124	ethylene biosynthesis V (engineered)
ATY44_08600	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
ATY44_08610	PWY-7560	methylerythritol phosphate pathway II
ATY44_08615	PWY-7560	methylerythritol phosphate pathway II
ATY44_08630	PWY-5381	pyridine nucleotide cycling (plants)
ATY44_08630	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
ATY44_08630	PWY-6596	adenosine nucleotides degradation I
ATY44_08630	PWY-6606	guanosine nucleotides degradation II
ATY44_08630	PWY-6607	guanosine nucleotides degradation I
ATY44_08630	PWY-6608	guanosine nucleotides degradation III
ATY44_08630	PWY-7185	UTP and CTP dephosphorylation I
ATY44_08630	PWY-7821	ATY44_08630
ATY44_08670	PWY-6614	tetrahydrofolate biosynthesis
ATY44_08675	PWY-2781	<i>cis</i>-zeatin biosynthesis
ATY44_08745	PWY-2681	<i>trans</i>-zeatin biosynthesis
ATY44_08800	PWY-6910	hydroxymethylpyrimidine salvage
ATY44_08800	PWY-7356	thiamin salvage IV (yeast)
ATY44_08800	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
ATY44_08830	PWY-2941	L-lysine biosynthesis II
ATY44_08830	PWY-2942	L-lysine biosynthesis III
ATY44_08830	PWY-5097	L-lysine biosynthesis VI
ATY44_08845	PWY-7130	L-glucose degradation
ATY44_08860	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
ATY44_08860	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
ATY44_08860	PWY-7242	D-fructuronate degradation
ATY44_08860	PWY-7310	D-glucosaminate degradation
ATY44_08860	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
ATY44_08880	PWY-6807	xyloglucan degradation II (exoglucanase)
ATY44_08890	PWY-4261	glycerol degradation I
ATY44_08990	PWY-2941	L-lysine biosynthesis II
ATY44_08990	PWY-2942	L-lysine biosynthesis III
ATY44_08990	PWY-5097	L-lysine biosynthesis VI
ATY44_08995	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ATY44_08995	PWY-5686	UMP biosynthesis
ATY44_08995	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
ATY44_08995	PWY-7790	ATY44_08995
ATY44_08995	PWY-7791	ATY44_08995
ATY44_09005	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ATY44_09005	PWY-5686	UMP biosynthesis
ATY44_09005	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
ATY44_09005	PWY-7790	ATY44_09005
ATY44_09005	PWY-7791	ATY44_09005
ATY44_09020	PWY-7805	ATY44_09020
ATY44_09020	PWY-7807	ATY44_09020
ATY44_09115	PWY-5747	2-methylcitrate cycle II
ATY44_09290	PWY-6854	ethylene biosynthesis III (microbes)
ATY44_09425	PWY-5022	4-aminobutanoate degradation V
ATY44_09425	PWY-6728	methylaspartate cycle
ATY44_09425	PWY-7126	ethylene biosynthesis IV
ATY44_09505	PWY-381	nitrate reduction II (assimilatory)
ATY44_09505	PWY-5675	nitrate reduction V (assimilatory)
ATY44_09505	PWY-6549	L-glutamine biosynthesis III
ATY44_09505	PWY-6963	ammonia assimilation cycle I
ATY44_09505	PWY-6964	ammonia assimilation cycle II
ATY44_09515	PWY-381	nitrate reduction II (assimilatory)
ATY44_09515	PWY-5675	nitrate reduction V (assimilatory)
ATY44_09515	PWY-6549	L-glutamine biosynthesis III
ATY44_09515	PWY-6963	ammonia assimilation cycle I
ATY44_09515	PWY-6964	ammonia assimilation cycle II
ATY44_09625	PWY-3781	aerobic respiration I (cytochrome c)
ATY44_09625	PWY-6692	Fe(II) oxidation
ATY44_09625	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
ATY44_09625	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
ATY44_09755	PWY-6700	queuosine biosynthesis
ATY44_09760	PWY-6938	NADH repair
ATY44_09795	PWY-5676	acetyl-CoA fermentation to butanoate II
ATY44_09795	PWY-5741	ethylmalonyl-CoA pathway
ATY44_09795	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
ATY44_09795	PWY-7948	ATY44_09795
ATY44_09850	PWY-6605	adenine and adenosine salvage II
ATY44_09850	PWY-6610	adenine and adenosine salvage IV
ATY44_09850	PWY-7805	ATY44_09850
ATY44_09850	PWY-7807	ATY44_09850
ATY44_09880	PWY-6854	ethylene biosynthesis III (microbes)
ATY44_09885	PWY-2301	<i>myo</i>-inositol biosynthesis
ATY44_09885	PWY-4702	phytate degradation I
ATY44_09885	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
ATY44_09925	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
ATY44_09925	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
ATY44_09925	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
ATY44_09925	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
ATY44_09925	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
ATY44_09925	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
ATY44_09925	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
ATY44_09925	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
ATY44_09925	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
ATY44_09925	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
ATY44_09930	PWY-181	photorespiration
ATY44_09955	PWY-1081	homogalacturonan degradation
ATY44_09955	PWY-7246	pectin degradation II
ATY44_09955	PWY-7248	pectin degradation III
ATY44_10005	PWY-5686	UMP biosynthesis
ATY44_10005	PWY-7790	ATY44_10005
ATY44_10005	PWY-7791	ATY44_10005
ATY44_10050	PWY-5686	UMP biosynthesis
ATY44_10050	PWY-7790	ATY44_10050
ATY44_10050	PWY-7791	ATY44_10050
ATY44_10055	PWY-4983	L-citrulline-nitric oxide cycle
ATY44_10055	PWY-4984	urea cycle
ATY44_10055	PWY-5	canavanine biosynthesis
ATY44_10055	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ATY44_10055	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
ATY44_10070	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ATY44_10070	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
ATY44_10080	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ATY44_10080	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
ATY44_10085	PWY-4983	L-citrulline-nitric oxide cycle
ATY44_10085	PWY-4984	urea cycle
ATY44_10085	PWY-5	canavanine biosynthesis
ATY44_10085	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ATY44_10085	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
ATY44_10100	PWY-3341	L-proline biosynthesis III
ATY44_10100	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
ATY44_10105	PWY-3341	L-proline biosynthesis III
ATY44_10105	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
ATY44_10125	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
ATY44_10395	PWY-7980	ATY44_10395
ATY44_10460	PWY-4381	fatty acid biosynthesis initiation I
ATY44_10640	PWY-7887	ATY44_10640
ATY44_10640	PWY-7892	ATY44_10640
ATY44_10665	PWY-7801	ATY44_10665
ATY44_10740	PWY-1361	benzoyl-CoA degradation I (aerobic)
ATY44_10740	PWY-5109	2-methylbutanoate biosynthesis
ATY44_10740	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
ATY44_10740	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
ATY44_10740	PWY-5177	glutaryl-CoA degradation
ATY44_10740	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
ATY44_10740	PWY-6435	4-hydroxybenzoate biosynthesis V
ATY44_10740	PWY-6583	pyruvate fermentation to butanol I
ATY44_10740	PWY-6863	pyruvate fermentation to hexanol
ATY44_10740	PWY-6883	pyruvate fermentation to butanol II
ATY44_10740	PWY-6944	androstenedione degradation
ATY44_10740	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
ATY44_10740	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
ATY44_10740	PWY-7007	methyl ketone biosynthesis
ATY44_10740	PWY-7046	4-coumarate degradation (anaerobic)
ATY44_10740	PWY-7094	fatty acid salvage
ATY44_10740	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
ATY44_10740	PWY-735	jasmonic acid biosynthesis
ATY44_10740	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
ATY44_10740	PWY-7606	docosahexaenoate biosynthesis III (mammals)
ATY44_10740	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
ATY44_10740	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
ATY44_10740	PWY-7726	ATY44_10740
ATY44_10740	PWY-7778	ATY44_10740
ATY44_10740	PWY-7779	ATY44_10740
ATY44_10750	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
ATY44_10750	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
ATY44_10750	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
ATY44_10750	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
ATY44_10750	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
ATY44_10750	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
ATY44_10750	PWY-7205	CMP phosphorylation
ATY44_10750	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
ATY44_10750	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
ATY44_10750	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
ATY44_10750	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
ATY44_10750	PWY-7224	purine deoxyribonucleosides salvage
ATY44_10750	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
ATY44_10750	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
ATY44_10785	PWY-6823	molybdenum cofactor biosynthesis
ATY44_10890	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
ATY44_10890	PWY-5389	3-methylthiopropanoate biosynthesis
ATY44_10895	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
ATY44_11000	PWY-7942	ATY44_11000
ATY44_11065	PWY-5941	glycogen degradation II (eukaryotic)
ATY44_11065	PWY-6724	starch degradation II
ATY44_11065	PWY-6737	starch degradation V
ATY44_11065	PWY-7238	sucrose biosynthesis II
ATY44_11090	PWY-43	putrescine biosynthesis II
ATY44_11105	PWY-7205	CMP phosphorylation
ATY44_11130	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ATY44_11130	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
ATY44_11130	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ATY44_11140	PWY-3801	sucrose degradation II (sucrose synthase)
ATY44_11140	PWY-6527	stachyose degradation
ATY44_11140	PWY-7238	sucrose biosynthesis II
ATY44_11140	PWY-7343	UDP-glucose biosynthesis
ATY44_11140	PWY-7817	ATY44_11140
ATY44_11180	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
ATY44_11180	PWY-2201	folate transformations I
ATY44_11180	PWY-3841	folate transformations II
ATY44_11180	PWY-5030	L-histidine degradation III
ATY44_11180	PWY-5497	purine nucleobases degradation II (anaerobic)
ATY44_11180	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
ATY44_11180	PWY-7909	ATY44_11180
ATY44_11185	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
ATY44_11185	PWY-6596	adenosine nucleotides degradation I
ATY44_11185	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
ATY44_11190	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
ATY44_11270	PWY-5484	glycolysis II (from fructose 6-phosphate)
ATY44_11270	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ATY44_11285	PWY-6502	oxidized GTP and dGTP detoxification
ATY44_11370	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ATY44_11370	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ATY44_11380	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ATY44_11380	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ATY44_11380	PWY-7953	ATY44_11380
ATY44_11385	PWY-5686	UMP biosynthesis
ATY44_11415	PWY-2941	L-lysine biosynthesis II
ATY44_11415	PWY-2942	L-lysine biosynthesis III
ATY44_11415	PWY-5097	L-lysine biosynthesis VI
ATY44_11415	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
ATY44_11415	PWY-6559	spermidine biosynthesis II
ATY44_11415	PWY-6562	norspermidine biosynthesis
ATY44_11415	PWY-7153	grixazone biosynthesis
ATY44_11415	PWY-7977	ATY44_11415
ATY44_11420	PWY-702	L-methionine biosynthesis II
ATY44_11705	PWY-5269	cardiolipin biosynthesis II
ATY44_11705	PWY-5668	cardiolipin biosynthesis I
ATY44_11705	PWY-7817	ATY44_11705
ATY44_11725	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
ATY44_11785	PWY-3781	aerobic respiration I (cytochrome c)
ATY44_11785	PWY-4302	aerobic respiration III (alternative oxidase pathway)
ATY44_11785	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
ATY44_11785	PWY-5690	TCA cycle II (plants and fungi)
ATY44_11785	PWY-6728	methylaspartate cycle
ATY44_11785	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ATY44_11785	PWY-7254	TCA cycle VII (acetate-producers)
ATY44_11785	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
ATY44_11795	PWY-3781	aerobic respiration I (cytochrome c)
ATY44_11795	PWY-4302	aerobic respiration III (alternative oxidase pathway)
ATY44_11795	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
ATY44_11795	PWY-5690	TCA cycle II (plants and fungi)
ATY44_11795	PWY-6728	methylaspartate cycle
ATY44_11795	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ATY44_11795	PWY-7254	TCA cycle VII (acetate-producers)
ATY44_11795	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
ATY44_11820	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
ATY44_11825	PWY-2722	trehalose degradation IV
ATY44_11825	PWY-2723	trehalose degradation V
ATY44_11825	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
ATY44_11825	PWY-5661	GDP-glucose biosynthesis
ATY44_11825	PWY-621	sucrose degradation III (sucrose invertase)
ATY44_11825	PWY-7238	sucrose biosynthesis II
ATY44_11825	PWY-7385	1,3-propanediol biosynthesis (engineered)
ATY44_11830	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
ATY44_11830	PWY-6855	chitin degradation I (archaea)
ATY44_11830	PWY-6906	chitin derivatives degradation
ATY44_11835	PWY-5101	L-isoleucine biosynthesis II
ATY44_11835	PWY-5103	L-isoleucine biosynthesis III
ATY44_11835	PWY-5104	L-isoleucine biosynthesis IV
ATY44_11835	PWY-7111	pyruvate fermentation to isobutanol (engineered)
ATY44_11840	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
ATY44_11840	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
ATY44_11840	PWY-7242	D-fructuronate degradation
ATY44_11840	PWY-7310	D-glucosaminate degradation
ATY44_11840	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
ATY44_12045	PWY-6803	phosphatidylcholine acyl editing
ATY44_12045	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
ATY44_12045	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
ATY44_12045	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
ATY44_12045	PWY-7783	ATY44_12045
ATY44_12055	PWY-5392	reductive TCA cycle II
ATY44_12055	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
ATY44_12055	PWY-5690	TCA cycle II (plants and fungi)
ATY44_12055	PWY-5913	TCA cycle VI (obligate autotrophs)
ATY44_12055	PWY-6728	methylaspartate cycle
ATY44_12055	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ATY44_12055	PWY-7254	TCA cycle VII (acetate-producers)
ATY44_12055	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
ATY44_12185	PWY-3801	sucrose degradation II (sucrose synthase)
ATY44_12185	PWY-5054	sorbitol biosynthesis I
ATY44_12185	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
ATY44_12185	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
ATY44_12185	PWY-5659	GDP-mannose biosynthesis
ATY44_12185	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ATY44_12185	PWY-621	sucrose degradation III (sucrose invertase)
ATY44_12185	PWY-622	starch biosynthesis
ATY44_12185	PWY-6981	chitin biosynthesis
ATY44_12185	PWY-6992	1,5-anhydrofructose degradation
ATY44_12185	PWY-7238	sucrose biosynthesis II
ATY44_12185	PWY-7347	sucrose biosynthesis III
ATY44_12185	PWY-7385	1,3-propanediol biosynthesis (engineered)
ATY44_12190	PWY-5155	&beta;-alanine biosynthesis III
ATY44_12200	PWY-6654	phosphopantothenate biosynthesis III
ATY44_12205	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
ATY44_12205	PWY-6148	tetrahydromethanopterin biosynthesis
ATY44_12205	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
ATY44_12205	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
ATY44_12205	PWY-7852	ATY44_12205
ATY44_12205	PWY-7853	ATY44_12205
ATY44_12220	PWY-5663	tetrahydrobiopterin biosynthesis I
ATY44_12220	PWY-5664	tetrahydrobiopterin biosynthesis II
ATY44_12220	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
ATY44_12220	PWY-6703	preQ<sub>0</sub> biosynthesis
ATY44_12220	PWY-6983	tetrahydrobiopterin biosynthesis III
ATY44_12220	PWY-7442	drosopterin and aurodrosopterin biosynthesis
ATY44_12220	PWY-7852	ATY44_12220
ATY44_12295	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
ATY44_12300	PWY-3461	L-tyrosine biosynthesis II
ATY44_12300	PWY-3462	L-phenylalanine biosynthesis II
ATY44_12300	PWY-6120	L-tyrosine biosynthesis III
ATY44_12300	PWY-6627	salinosporamide A biosynthesis
ATY44_12300	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
ATY44_12300	PWY-7626	bacilysin biosynthesis
ATY44_12355	PWY-5028	L-histidine degradation II
ATY44_12355	PWY-5030	L-histidine degradation III
ATY44_12360	PWY-5028	L-histidine degradation II
ATY44_12360	PWY-5030	L-histidine degradation III
ATY44_12370	PWY-5028	L-histidine degradation II
ATY44_12370	PWY-5030	L-histidine degradation III
ATY44_12400	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
ATY44_12400	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
ATY44_12485	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
ATY44_12485	PWY-5743	3-hydroxypropanoate cycle
ATY44_12485	PWY-5744	glyoxylate assimilation
ATY44_12485	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
ATY44_12485	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ATY44_12485	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
ATY44_12485	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
ATY44_12490	PWY-5647	2-nitrobenzoate degradation I
ATY44_12490	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
ATY44_12490	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
ATY44_12490	PWY-6505	L-tryptophan degradation XII (Geobacillus)
ATY44_12500	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
ATY44_12500	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
ATY44_12505	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
ATY44_12505	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
ATY44_12505	PWY-7717	ATY44_12505
ATY44_12505	PWY-7765	ATY44_12505
ATY44_12530	PWY-5381	pyridine nucleotide cycling (plants)
ATY44_12530	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
ATY44_12530	PWY-6596	adenosine nucleotides degradation I
ATY44_12530	PWY-6606	guanosine nucleotides degradation II
ATY44_12530	PWY-6607	guanosine nucleotides degradation I
ATY44_12530	PWY-6608	guanosine nucleotides degradation III
ATY44_12530	PWY-7185	UTP and CTP dephosphorylation I
ATY44_12530	PWY-7821	ATY44_12530
ATY44_12535	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
ATY44_12535	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
ATY44_12535	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
ATY44_12610	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
ATY44_12610	PWY-5743	3-hydroxypropanoate cycle
ATY44_12610	PWY-5744	glyoxylate assimilation
ATY44_12610	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
ATY44_12610	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ATY44_12610	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
ATY44_12610	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
ATY44_12735	PWY-6700	queuosine biosynthesis
ATY44_12740	PWY-6700	queuosine biosynthesis
ATY44_12875	PWY-4702	phytate degradation I
ATY44_12890	PWY-7183	pyrimidine nucleobases salvage I
ATY44_12910	PWY-4041	&gamma;-glutamyl cycle
ATY44_12910	PWY-4061	glutathione-mediated detoxification I
ATY44_12910	PWY-5826	hypoglycin biosynthesis
ATY44_12910	PWY-6842	glutathione-mediated detoxification II
ATY44_12910	PWY-7112	4-hydroxy-2-nonenal detoxification
ATY44_12910	PWY-7559	glutathione degradation (DUG pathway - yeast)
ATY44_12930	PWY-7851	ATY44_12930
ATY44_13025	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
ATY44_13175	PWY-6700	queuosine biosynthesis
ATY44_13295	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
ATY44_13335	PWY-2201	folate transformations I
ATY44_13335	PWY-3841	folate transformations II
ATY44_13335	PWY-7977	ATY44_13335
ATY44_13375	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
ATY44_13375	PWY-7820	ATY44_13375
ATY44_13425	PWY-5392	reductive TCA cycle II
ATY44_13425	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
ATY44_13425	PWY-5690	TCA cycle II (plants and fungi)
ATY44_13425	PWY-5913	TCA cycle VI (obligate autotrophs)
ATY44_13425	PWY-6728	methylaspartate cycle
ATY44_13425	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ATY44_13425	PWY-7254	TCA cycle VII (acetate-producers)
ATY44_13425	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
ATY44_13475	PWY-6123	inosine-5'-phosphate biosynthesis I
ATY44_13475	PWY-6124	inosine-5'-phosphate biosynthesis II
ATY44_13475	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
ATY44_13475	PWY-7234	inosine-5'-phosphate biosynthesis III
ATY44_13505	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
ATY44_13510	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
ATY44_13515	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
ATY44_13515	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
ATY44_13550	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
ATY44_13555	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
ATY44_13555	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
ATY44_13635	PWY-6891	thiazole biosynthesis II (Bacillus)
ATY44_13635	PWY-6892	thiazole biosynthesis I (E. coli)
ATY44_13635	PWY-7560	methylerythritol phosphate pathway II
ATY44_13640	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ATY44_13640	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
ATY44_13640	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
ATY44_13640	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ATY44_13790	PWY-7799	ATY44_13790
ATY44_13790	PWY-7800	ATY44_13790
ATY44_13855	PWY-5667	CDP-diacylglycerol biosynthesis I
ATY44_13855	PWY-5981	CDP-diacylglycerol biosynthesis III
ATY44_13855	PWY-7817	ATY44_13855
ATY44_13860	PWY-7560	methylerythritol phosphate pathway II
ATY44_13880	PWY-5971	palmitate biosynthesis II (bacteria and plants)
ATY44_13880	PWY-5973	<i>cis</i>-vaccenate biosynthesis
ATY44_13880	PWY-5989	stearate biosynthesis II (bacteria and plants)
ATY44_13880	PWY-5994	palmitate biosynthesis I (animals and fungi)
ATY44_13880	PWY-6113	superpathway of mycolate biosynthesis
ATY44_13880	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
ATY44_13880	PWY-6519	8-amino-7-oxononanoate biosynthesis I
ATY44_13880	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
ATY44_13880	PWY-7663	gondoate biosynthesis (anaerobic)
ATY44_13880	PWY-7664	oleate biosynthesis IV (anaerobic)
ATY44_13880	PWY-7858	ATY44_13880
ATY44_13880	PWYG-321	mycolate biosynthesis
ATY44_13905	PWY-4381	fatty acid biosynthesis initiation I
ATY44_13905	PWY-5743	3-hydroxypropanoate cycle
ATY44_13905	PWY-5744	glyoxylate assimilation
ATY44_13905	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
ATY44_13905	PWY-6722	candicidin biosynthesis
ATY44_14355	PWY-6902	chitin degradation II
ATY44_14355	PWY-7822	ATY44_14355
ATY44_14355	PWY-7883	ATY44_14355
ATY44_14455	PWY-1361	benzoyl-CoA degradation I (aerobic)
ATY44_14455	PWY-5109	2-methylbutanoate biosynthesis
ATY44_14455	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
ATY44_14455	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
ATY44_14455	PWY-5177	glutaryl-CoA degradation
ATY44_14455	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
ATY44_14455	PWY-6435	4-hydroxybenzoate biosynthesis V
ATY44_14455	PWY-6583	pyruvate fermentation to butanol I
ATY44_14455	PWY-6863	pyruvate fermentation to hexanol
ATY44_14455	PWY-6883	pyruvate fermentation to butanol II
ATY44_14455	PWY-6944	androstenedione degradation
ATY44_14455	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
ATY44_14455	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
ATY44_14455	PWY-7007	methyl ketone biosynthesis
ATY44_14455	PWY-7046	4-coumarate degradation (anaerobic)
ATY44_14455	PWY-7094	fatty acid salvage
ATY44_14455	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
ATY44_14455	PWY-735	jasmonic acid biosynthesis
ATY44_14455	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
ATY44_14455	PWY-7606	docosahexaenoate biosynthesis III (mammals)
ATY44_14455	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
ATY44_14455	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
ATY44_14455	PWY-7726	ATY44_14455
ATY44_14455	PWY-7778	ATY44_14455
ATY44_14455	PWY-7779	ATY44_14455
ATY44_14485	PWY-5642	2,4-dinitrotoluene degradation
ATY44_14505	PWY-6807	xyloglucan degradation II (exoglucanase)
ATY44_14510	PWY-6807	xyloglucan degradation II (exoglucanase)
ATY44_14520	PWY-6807	xyloglucan degradation II (exoglucanase)
ATY44_14595	PWY-801	L-homocysteine and L-cysteine interconversion
ATY44_14640	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ATY44_14640	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
ATY44_14640	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
ATY44_14640	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ATY44_14670	PWY-7094	fatty acid salvage
ATY44_14670	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
ATY44_14745	PWY-2722	trehalose degradation IV
ATY44_14745	PWY-2723	trehalose degradation V
ATY44_14745	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
ATY44_14745	PWY-5661	GDP-glucose biosynthesis
ATY44_14745	PWY-621	sucrose degradation III (sucrose invertase)
ATY44_14745	PWY-7238	sucrose biosynthesis II
ATY44_14745	PWY-7385	1,3-propanediol biosynthesis (engineered)
ATY44_14755	PWY-6807	xyloglucan degradation II (exoglucanase)
ATY44_14765	PWY-6902	chitin degradation II
ATY44_14765	PWY-7822	ATY44_14765
ATY44_14765	PWY-7883	ATY44_14765
ATY44_14835	PWY-6807	xyloglucan degradation II (exoglucanase)
ATY44_14975	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ATY44_14975	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
ATY44_14975	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
ATY44_14975	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ATY44_15000	PWY-6420	pyrroloquinoline quinone biosynthesis
ATY44_15025	PWY-2722	trehalose degradation IV
ATY44_15025	PWY-2723	trehalose degradation V
ATY44_15025	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
ATY44_15025	PWY-5661	GDP-glucose biosynthesis
ATY44_15025	PWY-621	sucrose degradation III (sucrose invertase)
ATY44_15025	PWY-7238	sucrose biosynthesis II
ATY44_15025	PWY-7385	1,3-propanediol biosynthesis (engineered)
ATY44_15030	PWY-2722	trehalose degradation IV
ATY44_15030	PWY-2723	trehalose degradation V
ATY44_15030	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
ATY44_15030	PWY-5661	GDP-glucose biosynthesis
ATY44_15030	PWY-621	sucrose degradation III (sucrose invertase)
ATY44_15030	PWY-7238	sucrose biosynthesis II
ATY44_15030	PWY-7385	1,3-propanediol biosynthesis (engineered)
ATY44_15035	PWY-2722	trehalose degradation IV
ATY44_15035	PWY-2723	trehalose degradation V
ATY44_15035	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
ATY44_15035	PWY-5661	GDP-glucose biosynthesis
ATY44_15035	PWY-621	sucrose degradation III (sucrose invertase)
ATY44_15035	PWY-7238	sucrose biosynthesis II
ATY44_15035	PWY-7385	1,3-propanediol biosynthesis (engineered)
ATY44_15075	PWY-6703	preQ<sub>0</sub> biosynthesis
ATY44_15100	PWY-6703	preQ<sub>0</sub> biosynthesis
ATY44_15205	PWY-7782	ATY44_15205
ATY44_15205	PWY-7783	ATY44_15205
ATY44_15400	PWY-3781	aerobic respiration I (cytochrome c)
ATY44_15400	PWY-4521	arsenite oxidation I (respiratory)
ATY44_15400	PWY-6692	Fe(II) oxidation
ATY44_15400	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
ATY44_15400	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
ATY44_15415	PWY-7560	methylerythritol phosphate pathway II
ATY44_15420	PWY-7884	ATY44_15420
ATY44_15430	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
ATY44_15430	PWY-6167	flavin biosynthesis II (archaea)
ATY44_15430	PWY-6168	flavin biosynthesis III (fungi)
ATY44_15430	PWY-7863	ATY44_15430
ATY44_15505	PWY-7802	ATY44_15505
ATY44_15585	PWY-5381	pyridine nucleotide cycling (plants)
ATY44_15585	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
ATY44_15585	PWY-7761	ATY44_15585
ATY44_15595	PWY-5392	reductive TCA cycle II
ATY44_15595	PWY-5537	pyruvate fermentation to acetate V
ATY44_15595	PWY-5538	pyruvate fermentation to acetate VI
ATY44_15595	PWY-5690	TCA cycle II (plants and fungi)
ATY44_15595	PWY-5913	TCA cycle VI (obligate autotrophs)
ATY44_15595	PWY-6728	methylaspartate cycle
ATY44_15595	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ATY44_15595	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
ATY44_15600	PWY-5392	reductive TCA cycle II
ATY44_15600	PWY-5537	pyruvate fermentation to acetate V
ATY44_15600	PWY-5538	pyruvate fermentation to acetate VI
ATY44_15600	PWY-5690	TCA cycle II (plants and fungi)
ATY44_15600	PWY-5913	TCA cycle VI (obligate autotrophs)
ATY44_15600	PWY-6728	methylaspartate cycle
ATY44_15600	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ATY44_15600	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
ATY44_15660	PWY-7851	ATY44_15660
ATY44_16005	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
ATY44_16160	PWY-1622	formaldehyde assimilation I (serine pathway)
ATY44_16160	PWY-5484	glycolysis II (from fructose 6-phosphate)
ATY44_16340	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ATY44_16340	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ATY44_16355	PWY-2941	L-lysine biosynthesis II
ATY44_16355	PWY-2942	L-lysine biosynthesis III
ATY44_16355	PWY-5097	L-lysine biosynthesis VI
ATY44_16355	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
ATY44_16355	PWY-6559	spermidine biosynthesis II
ATY44_16355	PWY-6562	norspermidine biosynthesis
ATY44_16355	PWY-7153	grixazone biosynthesis
ATY44_16355	PWY-7977	ATY44_16355
ATY44_16390	PWY-5686	UMP biosynthesis
ATY44_16390	PWY-7790	ATY44_16390
ATY44_16390	PWY-7791	ATY44_16390
ATY44_16440	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
ATY44_16445	PWY-3341	L-proline biosynthesis III
ATY44_16445	PWY-4981	L-proline biosynthesis II (from arginine)
ATY44_16445	PWY-6344	L-ornithine degradation II (Stickland reaction)
ATY44_16515	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
ATY44_16745	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
ATY44_16745	PWY-6269	adenosylcobalamin salvage from cobinamide II
ATY44_16745	PWY-7961	ATY44_16745
ATY44_16745	PWY-7963	ATY44_16745
ATY44_16745	PWY-7964	ATY44_16745
ATY44_16745	PWY-7965	ATY44_16745
ATY44_16745	PWY-7966	ATY44_16745
ATY44_16745	PWY-7967	ATY44_16745
ATY44_16745	PWY-7968	ATY44_16745
ATY44_16745	PWY-7969	ATY44_16745
ATY44_16745	PWY-7970	ATY44_16745
ATY44_16745	PWY-7975	ATY44_16745
ATY44_16755	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
ATY44_16755	PWY-6269	adenosylcobalamin salvage from cobinamide II
ATY44_16755	PWY-7964	ATY44_16755
ATY44_16755	PWY-7965	ATY44_16755
ATY44_16755	PWY-7966	ATY44_16755
ATY44_16755	PWY-7967	ATY44_16755
ATY44_16755	PWY-7968	ATY44_16755
ATY44_16755	PWY-7969	ATY44_16755
ATY44_16755	PWY-7970	ATY44_16755
ATY44_16760	PWY-6269	adenosylcobalamin salvage from cobinamide II
ATY44_16760	PWY-7962	ATY44_16760
ATY44_16760	PWY-7971	ATY44_16760
ATY44_16760	PWY-7972	ATY44_16760
ATY44_16875	PWY-6829	tRNA methylation (yeast)
ATY44_16875	PWY-7285	methylwyosine biosynthesis
ATY44_16875	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
ATY44_16895	PWY-723	alkylnitronates degradation
ATY44_16920	PWY-6317	galactose degradation I (Leloir pathway)
ATY44_17015	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
ATY44_17015	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
ATY44_17015	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
ATY44_17030	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
ATY44_17030	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
ATY44_17050	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ATY44_17050	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ATY44_17050	PWY-7953	ATY44_17050
ATY44_17065	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
ATY44_17065	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
ATY44_17275	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
ATY44_17275	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
ATY44_17280	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
ATY44_17285	PWY-6164	3-dehydroquinate biosynthesis I
ATY44_17295	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
ATY44_17295	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
ATY44_17295	PWY-7766	ATY44_17295
ATY44_17400	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
ATY44_17540	PWY-1042	glycolysis IV (plant cytosol)
ATY44_17540	PWY-5484	glycolysis II (from fructose 6-phosphate)
ATY44_17540	PWY-6901	superpathway of glucose and xylose degradation
ATY44_17540	PWY-7003	glycerol degradation to butanol
ATY44_17685	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
ATY44_17685	PWY-5723	Rubisco shunt
ATY44_17685	PWY-6891	thiazole biosynthesis II (Bacillus)
ATY44_17685	PWY-6892	thiazole biosynthesis I (E. coli)
ATY44_17685	PWY-6901	superpathway of glucose and xylose degradation
ATY44_17685	PWY-7560	methylerythritol phosphate pathway II
ATY44_17775	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ATY44_17775	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
ATY44_17775	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
ATY44_17775	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ATY44_17835	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
ATY44_17885	PWY-7799	ATY44_17885
ATY44_17885	PWY-7800	ATY44_17885
ATY44_17915	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
ATY44_17915	PWY-5723	Rubisco shunt
ATY44_17935	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
ATY44_17935	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
ATY44_17935	PWY-6897	thiamin salvage II
ATY44_17935	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
ATY44_17935	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
ATY44_17935	PWY-7356	thiamin salvage IV (yeast)
ATY44_17935	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
ATY44_17975	PWY-1281	sulfoacetaldehyde degradation I
ATY44_17975	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
ATY44_17975	PWY-5482	pyruvate fermentation to acetate II
ATY44_17975	PWY-5485	pyruvate fermentation to acetate IV
ATY44_17975	PWY-5497	purine nucleobases degradation II (anaerobic)
ATY44_17975	PWY-6637	sulfolactate degradation II
ATY44_17975	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
ATY44_18050	PWY-5676	acetyl-CoA fermentation to butanoate II
ATY44_18050	PWY-5741	ethylmalonyl-CoA pathway
ATY44_18050	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
ATY44_18050	PWY-7948	ATY44_18050
ATY44_18130	PWY-6769	rhamnogalacturonan type I degradation I (fungi)
ATY44_18130	PWY-6771	rhamnogalacturonan type I degradation II (bacteria)
ATY44_18135	PWY-6717	(1,4)-&beta;-xylan degradation
ATY44_18135	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
ATY44_18150	PWY-4202	arsenate detoxification I (glutaredoxin)
ATY44_18150	PWY-4621	arsenate detoxification II (glutaredoxin)
ATY44_18210	PWY-6823	molybdenum cofactor biosynthesis
ATY44_18210	PWY-7887	ATY44_18210
ATY44_18220	PWY-6823	molybdenum cofactor biosynthesis
ATY44_18230	PWY-6823	molybdenum cofactor biosynthesis
ATY44_18240	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
ATY44_18240	PWY-7676	Kdo8N transfer to lipid IV<sub>A</sub>
ATY44_18360	PWY-5386	methylglyoxal degradation I
ATY44_18545	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
ATY44_18545	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
ATY44_18545	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
ATY44_18545	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
ATY44_18560	PWY-2161	folate polyglutamylation
ATY44_18575	PWY-7782	ATY44_18575
ATY44_18575	PWY-7783	ATY44_18575
ATY44_18585	PWY-7378	aminopropanol phosphate biosynthesis II
ATY44_18745	PWY-1622	formaldehyde assimilation I (serine pathway)
ATY44_18745	PWY-5392	reductive TCA cycle II
ATY44_18745	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
ATY44_18745	PWY-5690	TCA cycle II (plants and fungi)
ATY44_18745	PWY-5913	TCA cycle VI (obligate autotrophs)
ATY44_18745	PWY-6728	methylaspartate cycle
ATY44_18745	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ATY44_18745	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
ATY44_18745	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
ATY44_18765	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
ATY44_18775	PWY-6164	3-dehydroquinate biosynthesis I
ATY44_18930	PWY-7883	ATY44_18930
ATY44_18935	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
ATY44_18940	PWY-1042	glycolysis IV (plant cytosol)
ATY44_18940	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
ATY44_18940	PWY-5484	glycolysis II (from fructose 6-phosphate)
ATY44_18940	PWY-7385	1,3-propanediol biosynthesis (engineered)
ATY44_18970	PWY-7805	ATY44_18970
ATY44_18970	PWY-7807	ATY44_18970
ATY44_19000	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
ATY44_19005	PWY-5103	L-isoleucine biosynthesis III
ATY44_19005	PWY-7111	pyruvate fermentation to isobutanol (engineered)
ATY44_19010	PWY-5101	L-isoleucine biosynthesis II
ATY44_19010	PWY-5103	L-isoleucine biosynthesis III
ATY44_19010	PWY-5104	L-isoleucine biosynthesis IV
ATY44_19010	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
ATY44_19010	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
ATY44_19010	PWY-6389	(<i>S</i>)-acetoin biosynthesis
ATY44_19010	PWY-7111	pyruvate fermentation to isobutanol (engineered)
ATY44_19025	PWY-6871	3-methylbutanol biosynthesis
ATY44_19030	PWY-7396	butanol and isobutanol biosynthesis (engineered)
ATY44_19090	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
ATY44_19140	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
ATY44_19235	PWY-5747	2-methylcitrate cycle II
ATY44_19270	PWY-5958	acridone alkaloid biosynthesis
ATY44_19270	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
ATY44_19270	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
ATY44_19285	PWY-5367	petroselinate biosynthesis
ATY44_19285	PWY-5971	palmitate biosynthesis II (bacteria and plants)
ATY44_19285	PWY-5973	<i>cis</i>-vaccenate biosynthesis
ATY44_19285	PWY-5989	stearate biosynthesis II (bacteria and plants)
ATY44_19285	PWY-5994	palmitate biosynthesis I (animals and fungi)
ATY44_19285	PWY-6113	superpathway of mycolate biosynthesis
ATY44_19285	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
ATY44_19285	PWY-6519	8-amino-7-oxononanoate biosynthesis I
ATY44_19285	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
ATY44_19285	PWY-7663	gondoate biosynthesis (anaerobic)
ATY44_19285	PWY-7664	oleate biosynthesis IV (anaerobic)
ATY44_19285	PWY-7858	ATY44_19285
ATY44_19285	PWYG-321	mycolate biosynthesis
ATY44_19290	PWY-4381	fatty acid biosynthesis initiation I
ATY44_19290	PWY-6799	fatty acid biosynthesis (plant mitochondria)
ATY44_19290	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
ATY44_19300	PWY-4381	fatty acid biosynthesis initiation I
ATY44_19470	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
ATY44_19470	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
ATY44_19470	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
ATY44_19525	PWY-6825	phosphatidylcholine biosynthesis V
ATY44_19600	PWY-5669	phosphatidylethanolamine biosynthesis I
ATY44_19670	PWY-6749	CMP-legionaminate biosynthesis I
ATY44_19675	PWY-5659	GDP-mannose biosynthesis
ATY44_19675	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
ATY44_19690	PWY-3221	dTDP-L-rhamnose biosynthesis II
ATY44_19690	PWY-6808	dTDP-D-forosamine biosynthesis
ATY44_19690	PWY-6942	dTDP-D-desosamine biosynthesis
ATY44_19690	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
ATY44_19690	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
ATY44_19690	PWY-6974	dTDP-L-olivose biosynthesis
ATY44_19690	PWY-6976	dTDP-L-mycarose biosynthesis
ATY44_19690	PWY-7104	dTDP-L-megosamine biosynthesis
ATY44_19690	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
ATY44_19690	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
ATY44_19690	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
ATY44_19690	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
ATY44_19690	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
ATY44_19690	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
ATY44_19690	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
ATY44_19690	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
ATY44_19690	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
ATY44_19690	PWY-7688	ATY44_19690
ATY44_19690	PWY-7814	ATY44_19690
ATY44_19695	PWY-3221	dTDP-L-rhamnose biosynthesis II
ATY44_19695	PWY-6808	dTDP-D-forosamine biosynthesis
ATY44_19695	PWY-6942	dTDP-D-desosamine biosynthesis
ATY44_19695	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
ATY44_19695	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
ATY44_19695	PWY-6974	dTDP-L-olivose biosynthesis
ATY44_19695	PWY-6976	dTDP-L-mycarose biosynthesis
ATY44_19695	PWY-7104	dTDP-L-megosamine biosynthesis
ATY44_19695	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
ATY44_19695	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
ATY44_19695	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
ATY44_19695	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
ATY44_19695	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
ATY44_19695	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
ATY44_19695	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
ATY44_19695	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
ATY44_19695	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
ATY44_19695	PWY-7688	ATY44_19695
ATY44_19695	PWY-7814	ATY44_19695
ATY44_19825	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
ATY44_19840	PWY-181	photorespiration
ATY44_19850	PWY-5971	palmitate biosynthesis II (bacteria and plants)
ATY44_19850	PWY-5973	<i>cis</i>-vaccenate biosynthesis
ATY44_19850	PWY-5989	stearate biosynthesis II (bacteria and plants)
ATY44_19850	PWY-5994	palmitate biosynthesis I (animals and fungi)
ATY44_19850	PWY-6113	superpathway of mycolate biosynthesis
ATY44_19850	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
ATY44_19850	PWY-6519	8-amino-7-oxononanoate biosynthesis I
ATY44_19850	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
ATY44_19850	PWY-7663	gondoate biosynthesis (anaerobic)
ATY44_19850	PWY-7664	oleate biosynthesis IV (anaerobic)
ATY44_19850	PWY-7858	ATY44_19850
ATY44_19850	PWYG-321	mycolate biosynthesis
ATY44_19895	PWY-5386	methylglyoxal degradation I
ATY44_19920	PWY-6749	CMP-legionaminate biosynthesis I
ATY44_19965	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
ATY44_19975	PWY-3461	L-tyrosine biosynthesis II
ATY44_19975	PWY-3462	L-phenylalanine biosynthesis II
ATY44_19975	PWY-6120	L-tyrosine biosynthesis III
ATY44_19975	PWY-6627	salinosporamide A biosynthesis
ATY44_19975	PWY-7626	bacilysin biosynthesis
ATY44_19985	PWY-7980	ATY44_19985
ATY44_19995	PWY-7980	ATY44_19995
ATY44_20035	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
ATY44_20035	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
ATY44_20170	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
ATY44_20525	PWY-3781	aerobic respiration I (cytochrome c)
ATY44_20525	PWY-4521	arsenite oxidation I (respiratory)
ATY44_20525	PWY-6692	Fe(II) oxidation
ATY44_20525	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
ATY44_20540	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
ATY44_20540	PWY-6853	ethylene biosynthesis II (microbes)
ATY44_20540	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
ATY44_20605	PWY-6834	spermidine biosynthesis III
ATY44_20640	PWY-5958	acridone alkaloid biosynthesis
ATY44_20640	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
ATY44_20640	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
ATY44_20665	PWY-5913	TCA cycle VI (obligate autotrophs)
ATY44_20665	PWY-6549	L-glutamine biosynthesis III
ATY44_20665	PWY-6728	methylaspartate cycle
ATY44_20665	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ATY44_20665	PWY-7124	ethylene biosynthesis V (engineered)
ATY44_20665	PWY-7254	TCA cycle VII (acetate-producers)
ATY44_20665	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
ATY44_20820	PWY-6168	flavin biosynthesis III (fungi)
ATY44_20820	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
ATY44_20820	PWY-7991	ATY44_20820
ATY44_20985	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
ATY44_20985	PWY-6416	quinate degradation II
ATY44_20985	PWY-6707	gallate biosynthesis
ATY44_21120	PWY-6123	inosine-5'-phosphate biosynthesis I
ATY44_21120	PWY-6124	inosine-5'-phosphate biosynthesis II
ATY44_21120	PWY-7234	inosine-5'-phosphate biosynthesis III
ATY44_21130	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
ATY44_21130	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
ATY44_21130	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
ATY44_21185	PWY-5381	pyridine nucleotide cycling (plants)
ATY44_21185	PWY-7761	ATY44_21185
ATY44_21275	PWY-7883	ATY44_21275
ATY44_21295	PWY-5686	UMP biosynthesis
ATY44_21295	PWY-7790	ATY44_21295
ATY44_21295	PWY-7791	ATY44_21295
ATY44_21340	PWY-6749	CMP-legionaminate biosynthesis I
ATY44_21350	PWY-7851	ATY44_21350
ATY44_21405	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
ATY44_21410	PWY-6123	inosine-5'-phosphate biosynthesis I
ATY44_21410	PWY-6124	inosine-5'-phosphate biosynthesis II
ATY44_21410	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
ATY44_21410	PWY-7234	inosine-5'-phosphate biosynthesis III
ATY44_21415	PWY-6041	4-sulfocatechol degradation
ATY44_21420	PWY-6041	4-sulfocatechol degradation
ATY44_21425	PWY-1361	benzoyl-CoA degradation I (aerobic)
ATY44_21425	PWY-2361	3-oxoadipate degradation
ATY44_21425	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
ATY44_21465	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
ATY44_21465	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
ATY44_21465	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
ATY44_21465	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
ATY44_21465	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
ATY44_21465	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
ATY44_21465	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
ATY44_21465	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
ATY44_21470	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
ATY44_21470	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
ATY44_21470	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
ATY44_21470	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
ATY44_21470	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
ATY44_21470	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
ATY44_21470	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
ATY44_21470	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
ATY44_21480	PWY-5392	reductive TCA cycle II
ATY44_21480	PWY-5537	pyruvate fermentation to acetate V
ATY44_21480	PWY-5538	pyruvate fermentation to acetate VI
ATY44_21480	PWY-5690	TCA cycle II (plants and fungi)
ATY44_21480	PWY-5913	TCA cycle VI (obligate autotrophs)
ATY44_21480	PWY-6728	methylaspartate cycle
ATY44_21480	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ATY44_21480	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
ATY44_21505	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
ATY44_21565	PWY-6519	8-amino-7-oxononanoate biosynthesis I
ATY44_21565	PWY-6578	8-amino-7-oxononanoate biosynthesis III
ATY44_21565	PWY-7147	8-amino-7-oxononanoate biosynthesis II
ATY44_21570	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
ATY44_21685	PWY-31	canavanine degradation
ATY44_21685	PWY-4984	urea cycle
ATY44_21685	PWY-6305	putrescine biosynthesis IV
ATY44_21685	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
ATY44_21705	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
ATY44_21705	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
ATY44_21705	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
ATY44_21705	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
ATY44_21705	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
ATY44_21705	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
ATY44_21720	PWY-3961	phosphopantothenate biosynthesis II
ATY44_21725	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
ATY44_21725	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
ATY44_21825	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
ATY44_21855	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
ATY44_21855	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
ATY44_21965	PWY-6654	phosphopantothenate biosynthesis III
ATY44_22045	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ATY44_22045	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ATY44_22045	PWY-7953	ATY44_22045
ATY44_22175	PWY-5530	sorbitol biosynthesis II
ATY44_22190	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
ATY44_22190	PWY-6416	quinate degradation II
ATY44_22190	PWY-6707	gallate biosynthesis
ATY44_22400	PWY-5874	heme degradation
ATY44_22520	PWY-6134	L-tyrosine biosynthesis IV
ATY44_22520	PWY-7158	L-phenylalanine degradation V
ATY44_22660	PWY-5108	L-isoleucine biosynthesis V
ATY44_22660	PWY-5132	humulone biosynthesis
ATY44_22660	PWY-5133	cohumulone biosynthesis
ATY44_22660	PWY-6672	<i>cis</i>-genanyl-CoA degradation
ATY44_22660	PWY-7118	chitin degradation to ethanol
ATY44_22660	PWY-7857	ATY44_22660
ATY44_22695	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
ATY44_22705	PWY-6012	acyl carrier protein metabolism I
ATY44_22705	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
ATY44_22705	PWY-6289	petrobactin biosynthesis
ATY44_22750	PWY-7701	ATY44_22750
ATY44_22925	PWY-5663	tetrahydrobiopterin biosynthesis I
ATY44_22925	PWY-5664	tetrahydrobiopterin biosynthesis II
ATY44_22925	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
ATY44_22925	PWY-6703	preQ<sub>0</sub> biosynthesis
ATY44_22925	PWY-6983	tetrahydrobiopterin biosynthesis III
ATY44_22925	PWY-7442	drosopterin and aurodrosopterin biosynthesis
ATY44_22925	PWY-7852	ATY44_22925
ATY44_23040	PWY-7533	gliotoxin biosynthesis
ATY44_23075	PWY-6348	phosphate acquisition
