locus-tag class description ATY47_00005 PF08299 Bacterial dnaA protein helix-turn-helix ATY47_00005 PF11638 DnaA N-terminal domain ATY47_00005 PF00308 Bacterial dnaA protein ATY47_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ATY47_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ATY47_00010 PF02767 DNA polymerase III beta subunit, central domain ATY47_00015 PF02463 RecF/RecN/SMC N terminal domain ATY47_00020 PF00204 DNA gyrase B ATY47_00020 PF00986 DNA gyrase B subunit, carboxyl terminus ATY47_00020 PF18053 DNA gyrase B subunit insert domain ATY47_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_00020 PF01751 Toprim domain ATY47_00030 PF01435 Peptidase family M48 ATY47_00045 PF01618 MotA/TolQ/ExbB proton channel family ATY47_00050 PF02472 Biopolymer transport protein ExbD/TolR ATY47_00055 PF02472 Biopolymer transport protein ExbD/TolR ATY47_00060 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ATY47_00070 PF13396 Phospholipase_D-nuclease N-terminal ATY47_00070 PF13091 PLD-like domain ATY47_00080 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ATY47_00085 PF00155 Aminotransferase class I and II ATY47_00090 PF07715 TonB-dependent Receptor Plug Domain ATY47_00090 PF00593 TonB dependent receptor ATY47_00100 PF05598 Transposase domain (DUF772) ATY47_00100 PF01609 Transposase DDE domain ATY47_00105 PF01070 FMN-dependent dehydrogenase ATY47_00110 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family ATY47_00125 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ATY47_00125 PF07055 Enoyl reductase FAD binding domain ATY47_00125 PF12241 Trans-2-enoyl-CoA reductase catalytic region ATY47_00130 PF00294 pfkB family carbohydrate kinase ATY47_00145 PF05598 Transposase domain (DUF772) ATY47_00145 PF01609 Transposase DDE domain ATY47_00150 PF00005 ABC transporter ATY47_00160 PF05598 Transposase domain (DUF772) ATY47_00170 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ATY47_00170 PF00364 Biotin-requiring enzyme ATY47_00190 PF01609 Transposase DDE domain ATY47_00190 PF05598 Transposase domain (DUF772) ATY47_00200 PF00270 DEAD/DEAH box helicase ATY47_00200 PF00271 Helicase conserved C-terminal domain ATY47_00210 PF06903 VirK protein ATY47_00235 PF01609 Transposase DDE domain ATY47_00235 PF05598 Transposase domain (DUF772) ATY47_00285 PF03150 Di-haem cytochrome c peroxidase ATY47_00290 PF13460 NAD(P)H-binding ATY47_00295 PF00128 Alpha amylase, catalytic domain ATY47_00295 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ATY47_00305 PF00128 Alpha amylase, catalytic domain ATY47_00310 PF02446 4-alpha-glucanotransferase ATY47_00315 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ATY47_00315 PF00128 Alpha amylase, catalytic domain ATY47_00315 PF11941 Domain of unknown function (DUF3459) ATY47_00320 PF02806 Alpha amylase, C-terminal all-beta domain ATY47_00320 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ATY47_00320 PF00128 Alpha amylase, catalytic domain ATY47_00325 PF00534 Glycosyl transferases group 1 ATY47_00325 PF08323 Starch synthase catalytic domain ATY47_00330 PF00072 Response regulator receiver domain ATY47_00330 PF00990 Diguanylate cyclase, GGDEF domain ATY47_00340 PF05661 Protein of unknown function (DUF808) ATY47_00345 PF03109 ABC1 family ATY47_00355 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_00365 PF12794 Mechanosensitive ion channel inner membrane domain 1 ATY47_00365 PF12795 Mechanosensitive ion channel porin domain ATY47_00365 PF00924 Mechanosensitive ion channel ATY47_00390 PF01464 Transglycosylase SLT domain ATY47_00405 PF01311 Bacterial export proteins, family 1 ATY47_00415 PF18269 T3SS EscN ATPase C-terminal domain ATY47_00415 PF02874 ATP synthase alpha/beta family, beta-barrel domain ATY47_00415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATY47_00430 PF01514 Secretory protein of YscJ/FliF family ATY47_00445 PF01312 FlhB HrpN YscU SpaS Family ATY47_00450 PF00771 FHIPEP family ATY47_00465 PF00813 FliP family ATY47_00470 PF01313 Bacterial export proteins, family 3 ATY47_00515 PF05819 NolX protein ATY47_00540 PF00595 PDZ domain ATY47_00550 PF00512 His Kinase A (phospho-acceptor) domain ATY47_00550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_00550 PF08521 Two-component sensor kinase N-terminal ATY47_00555 PF08338 Domain of unknown function (DUF1731) ATY47_00555 PF01370 NAD dependent epimerase/dehydratase family ATY47_00565 PF01609 Transposase DDE domain ATY47_00565 PF05598 Transposase domain (DUF772) ATY47_00590 PF13936 Helix-turn-helix domain ATY47_00590 PF00665 Integrase core domain ATY47_00605 PF13344 Haloacid dehalogenase-like hydrolase ATY47_00605 PF00293 NUDIX domain ATY47_00630 PF13533 Biotin-lipoyl like ATY47_00635 PF00005 ABC transporter ATY47_00650 PF13936 Helix-turn-helix domain ATY47_00650 PF00665 Integrase core domain ATY47_00660 PF08845 Toxin SymE, type I toxin-antitoxin system ATY47_00675 PF03006 Haemolysin-III related ATY47_00680 PF00270 DEAD/DEAH box helicase ATY47_00680 PF09369 Domain of unknown function (DUF1998) ATY47_00680 PF00271 Helicase conserved C-terminal domain ATY47_00735 PF01493 GXGXG motif ATY47_00735 PF04898 Glutamate synthase central domain ATY47_00735 PF01645 Conserved region in glutamate synthase ATY47_00735 PF00310 Glutamine amidotransferases class-II ATY47_00740 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY47_00740 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ATY47_00760 PF13936 Helix-turn-helix domain ATY47_00760 PF00665 Integrase core domain ATY47_00795 PF05598 Transposase domain (DUF772) ATY47_00800 PF04962 KduI/IolB family ATY47_00805 PF04962 KduI/IolB family ATY47_00810 PF00356 Bacterial regulatory proteins, lacI family ATY47_00830 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ATY47_00830 PF02806 Alpha amylase, C-terminal all-beta domain ATY47_00830 PF00128 Alpha amylase, catalytic domain ATY47_00835 PF00128 Alpha amylase, catalytic domain ATY47_00835 PF16657 Maltogenic Amylase, C-terminal domain ATY47_00840 PF00128 Alpha amylase, catalytic domain ATY47_00840 PF11896 Domain of unknown function (DUF3416) ATY47_00845 PF13276 HTH-like domain ATY47_00845 PF13683 Integrase core domain ATY47_00860 PF00872 Transposase, Mutator family ATY47_00875 PF05598 Transposase domain (DUF772) ATY47_00890 PF13335 Magnesium chelatase, subunit ChlI C-terminal ATY47_00890 PF01078 Magnesium chelatase, subunit ChlI ATY47_00895 PF04380 Membrane fusogenic activity ATY47_00900 PF00543 Nitrogen regulatory protein P-II ATY47_00920 PF17284 Spermidine synthase tetramerisation domain ATY47_00925 PF17810 Arginine decarboxylase helical bundle domain ATY47_00925 PF17944 Arginine decarboxylase C-terminal helical extension ATY47_00925 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ATY47_00980 PF01134 Glucose inhibited division protein A ATY47_00980 PF13932 GidA associated domain ATY47_00990 PF00291 Pyridoxal-phosphate dependent enzyme ATY47_01010 PF13649 Methyltransferase domain ATY47_01020 PF12697 Alpha/beta hydrolase family ATY47_01030 PF13276 HTH-like domain ATY47_01030 PF13683 Integrase core domain ATY47_01040 PF04349 Periplasmic glucan biosynthesis protein, MdoG ATY47_01050 PF00265 Thymidine kinase ATY47_01055 PF00580 UvrD/REP helicase N-terminal domain ATY47_01055 PF13361 UvrD-like helicase C-terminal domain ATY47_01070 PF04337 Protein of unknown function, DUF480 ATY47_01075 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) ATY47_01080 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ATY47_01085 PF04820 Tryptophan halogenase ATY47_01100 PF00356 Bacterial regulatory proteins, lacI family ATY47_01110 PF01553 Acyltransferase ATY47_01130 PF01527 Transposase ATY47_01145 PF00657 GDSL-like Lipase/Acylhydrolase ATY47_01155 PF00351 Biopterin-dependent aromatic amino acid hydroxylase ATY47_01160 PF01037 Lrp/AsnC ligand binding domain ATY47_01170 PF00593 TonB dependent receptor ATY47_01170 PF07715 TonB-dependent Receptor Plug Domain ATY47_01170 PF07660 Secretin and TonB N terminus short domain ATY47_01175 PF00593 TonB dependent receptor ATY47_01175 PF07715 TonB-dependent Receptor Plug Domain ATY47_01185 PF05598 Transposase domain (DUF772) ATY47_01215 PF00107 Zinc-binding dehydrogenase ATY47_01215 PF08240 Alcohol dehydrogenase GroES-like domain ATY47_01220 PF00150 Cellulase (glycosyl hydrolase family 5) ATY47_01225 PF00150 Cellulase (glycosyl hydrolase family 5) ATY47_01230 PF00150 Cellulase (glycosyl hydrolase family 5) ATY47_01235 PF13936 Helix-turn-helix domain ATY47_01235 PF00665 Integrase core domain ATY47_01245 PF02810 SEC-C motif ATY47_01255 PF01609 Transposase DDE domain ATY47_01255 PF05598 Transposase domain (DUF772) ATY47_01260 PF01263 Aldose 1-epimerase ATY47_01265 PF07690 Major Facilitator Superfamily ATY47_01270 PF01126 Heme oxygenase ATY47_01275 PF13426 PAS domain ATY47_01275 PF01590 GAF domain ATY47_01275 PF00360 Phytochrome region ATY47_01275 PF08446 PAS fold ATY47_01280 PF03594 Benzoate membrane transport protein ATY47_01285 PF03594 Benzoate membrane transport protein ATY47_01320 PF01527 Transposase ATY47_01330 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ATY47_01330 PF06827 Zinc finger found in FPG and IleRS ATY47_01330 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ATY47_01340 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_01350 PF05598 Transposase domain (DUF772) ATY47_01360 PF04333 MlaA lipoprotein ATY47_01370 PF05494 MlaC protein ATY47_01375 PF02470 MlaD protein ATY47_01380 PF02405 Permease MlaE ATY47_01385 PF00005 ABC transporter ATY47_01415 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_01445 PF13276 HTH-like domain ATY47_01445 PF13683 Integrase core domain ATY47_01450 PF01527 Transposase ATY47_01470 PF13360 PQQ-like domain ATY47_01470 PF13570 PQQ-like domain ATY47_01470 PF01011 PQQ enzyme repeat ATY47_01475 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_01495 PF06165 Glycosyltransferase family 36 ATY47_01495 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain ATY47_01510 PF00512 His Kinase A (phospho-acceptor) domain ATY47_01510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_01515 PF02659 Putative manganese efflux pump ATY47_01520 PF01614 Bacterial transcriptional regulator ATY47_01520 PF09339 IclR helix-turn-helix domain ATY47_01525 PF07690 Major Facilitator Superfamily ATY47_01530 PF05336 L-rhamnose mutarotase ATY47_01555 PF01432 Peptidase family M3 ATY47_01570 PF00472 RF-1 domain ATY47_01580 PF00849 RNA pseudouridylate synthase ATY47_01590 PF03109 ABC1 family ATY47_01635 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_01640 PF01527 Transposase ATY47_01685 PF02558 Ketopantoate reductase PanE/ApbA ATY47_01685 PF08546 Ketopantoate reductase PanE/ApbA C terminal ATY47_01695 PF01061 ABC-2 type transporter ATY47_01700 PF00005 ABC transporter ATY47_01705 PF00175 Oxidoreductase NAD-binding domain ATY47_01705 PF01383 CpcD/allophycocyanin linker domain ATY47_01710 PF01545 Cation efflux family ATY47_01715 PF02583 Metal-sensitive transcriptional repressor ATY47_01725 PF01381 Helix-turn-helix ATY47_01735 PF00005 ABC transporter ATY47_01750 PF04820 Tryptophan halogenase ATY47_01770 PF00043 Glutathione S-transferase, C-terminal domain ATY47_01770 PF02798 Glutathione S-transferase, N-terminal domain ATY47_01775 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ATY47_01775 PF00326 Prolyl oligopeptidase family ATY47_01795 PF00490 Delta-aminolevulinic acid dehydratase ATY47_01805 PF03466 LysR substrate binding domain ATY47_01805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY47_01815 PF00258 Flavodoxin ATY47_01815 PF00175 Oxidoreductase NAD-binding domain ATY47_01815 PF00667 FAD binding domain ATY47_01825 PF01488 Shikimate / quinate 5-dehydrogenase ATY47_01825 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ATY47_01825 PF08501 Shikimate dehydrogenase substrate binding domain ATY47_01835 PF06733 DEAD_2 ATY47_01835 PF13307 Helicase C-terminal domain ATY47_01855 PF13533 Biotin-lipoyl like ATY47_01860 PF00199 Catalase ATY47_01860 PF06628 Catalase-related immune-responsive ATY47_01880 PF01207 Dihydrouridine synthase (Dus) ATY47_01890 PF00486 Transcriptional regulatory protein, C terminal ATY47_01890 PF00072 Response regulator receiver domain ATY47_01895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_01895 PF00512 His Kinase A (phospho-acceptor) domain ATY47_01895 PF00672 HAMP domain ATY47_01920 PF08279 HTH domain ATY47_01920 PF02237 Biotin protein ligase C terminal domain ATY47_01920 PF03099 Biotin/lipoate A/B protein ligase family ATY47_01925 PF03309 Type III pantothenate kinase ATY47_01940 PF02223 Thymidylate kinase ATY47_01960 PF00491 Arginase family ATY47_01975 PF05532 CsbD-like ATY47_01980 PF00579 tRNA synthetases class I (W and Y) ATY47_01985 PF00753 Metallo-beta-lactamase superfamily ATY47_02010 PF00892 EamA-like transporter family ATY47_02030 PF00199 Catalase ATY47_02035 PF04542 Sigma-70 region 2 ATY47_02035 PF08281 Sigma-70, region 4 ATY47_02045 PF02789 Cytosol aminopeptidase family, N-terminal domain ATY47_02045 PF00883 Cytosol aminopeptidase family, catalytic domain ATY47_02055 PF01594 AI-2E family transporter ATY47_02065 PF01040 UbiA prenyltransferase family ATY47_02075 PF06968 Biotin and Thiamin Synthesis associated domain ATY47_02075 PF04055 Radical SAM superfamily ATY47_02080 PF00155 Aminotransferase class I and II ATY47_02105 PF00535 Glycosyl transferase family 2 ATY47_02115 PF00109 Beta-ketoacyl synthase, N-terminal domain ATY47_02115 PF02801 Beta-ketoacyl synthase, C-terminal domain ATY47_02120 PF05166 YcgL domain ATY47_02135 PF00723 Glycosyl hydrolases family 15 ATY47_02140 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ATY47_02140 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ATY47_02150 PF00999 Sodium/hydrogen exchanger family ATY47_02150 PF02254 TrkA-N domain ATY47_02155 PF00571 CBS domain ATY47_02155 PF01769 Divalent cation transporter ATY47_02155 PF03448 MgtE intracellular N domain ATY47_02165 PF13607 Succinyl-CoA ligase like flavodoxin domain ATY47_02165 PF00583 Acetyltransferase (GNAT) family ATY47_02165 PF13380 CoA binding domain ATY47_02175 PF00317 Ribonucleotide reductase, all-alpha domain ATY47_02175 PF03477 ATP cone domain ATY47_02175 PF02867 Ribonucleotide reductase, barrel domain ATY47_02180 PF00268 Ribonucleotide reductase, small chain ATY47_02200 PF01527 Transposase ATY47_02215 PF02803 Thiolase, C-terminal domain ATY47_02215 PF00108 Thiolase, N-terminal domain ATY47_02220 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal ATY47_02220 PF00775 Dioxygenase ATY47_02230 PF00206 Lyase ATY47_02230 PF10397 Adenylosuccinate lyase C-terminus ATY47_02235 PF12146 Serine aminopeptidase, S33 ATY47_02240 PF02627 Carboxymuconolactone decarboxylase family ATY47_02250 PF01614 Bacterial transcriptional regulator ATY47_02250 PF09339 IclR helix-turn-helix domain ATY47_02260 PF00665 Integrase core domain ATY47_02260 PF13936 Helix-turn-helix domain ATY47_02265 PF00106 short chain dehydrogenase ATY47_02280 PF00750 tRNA synthetases class I (R) ATY47_02280 PF03485 Arginyl tRNA synthetase N terminal domain ATY47_02280 PF05746 DALR anticodon binding domain ATY47_02285 PF04002 RadC-like JAB domain ATY47_02290 PF04127 DNA / pantothenate metabolism flavoprotein ATY47_02290 PF02441 Flavoprotein ATY47_02295 PF00692 dUTPase ATY47_02300 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ATY47_02300 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ATY47_02300 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ATY47_02300 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ATY47_02315 PF00535 Glycosyl transferase family 2 ATY47_02320 PF01370 NAD dependent epimerase/dehydratase family ATY47_02330 PF17762 HTH domain found in ParB protein ATY47_02330 PF02195 ParB-like nuclease domain ATY47_02335 PF13614 AAA domain ATY47_02345 PF00156 Phosphoribosyl transferase domain ATY47_02350 PF03372 Endonuclease/Exonuclease/phosphatase family ATY47_02355 PF07690 Major Facilitator Superfamily ATY47_02365 PF03702 Anhydro-N-acetylmuramic acid kinase ATY47_02370 PF04225 Opacity-associated protein A LysM-like domain ATY47_02370 PF01551 Peptidase family M23 ATY47_02375 PF00579 tRNA synthetases class I (W and Y) ATY47_02410 PF01527 Transposase ATY47_02415 PF00072 Response regulator receiver domain ATY47_02415 PF01627 Hpt domain ATY47_02415 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ATY47_02415 PF00512 His Kinase A (phospho-acceptor) domain ATY47_02415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_02415 PF00672 HAMP domain ATY47_02420 PF00072 Response regulator receiver domain ATY47_02420 PF00486 Transcriptional regulatory protein, C terminal ATY47_02445 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_02455 PF01521 Iron-sulphur cluster biosynthesis ATY47_02465 PF09297 NADH pyrophosphatase zinc ribbon domain ATY47_02465 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain ATY47_02465 PF00293 NUDIX domain ATY47_02470 PF03186 CobD/Cbib protein ATY47_02470 PF17113 Regulatory signalling modulator protein AmpE ATY47_02490 PF07690 Major Facilitator Superfamily ATY47_02505 PF12805 FUSC-like inner membrane protein yccS ATY47_02515 PF12704 MacB-like periplasmic core domain ATY47_02515 PF02687 FtsX-like permease family ATY47_02515 PF00005 ABC transporter ATY47_02520 PF02844 Phosphoribosylglycinamide synthetase, N domain ATY47_02520 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATY47_02520 PF02843 Phosphoribosylglycinamide synthetase, C domain ATY47_02530 PF02142 MGS-like domain ATY47_02530 PF01808 AICARFT/IMPCHase bienzyme ATY47_02540 PF12147 Putative methyltransferase ATY47_02540 PF12146 Serine aminopeptidase, S33 ATY47_02550 PF12147 Putative methyltransferase ATY47_02550 PF12146 Serine aminopeptidase, S33 ATY47_02555 PF00782 Dual specificity phosphatase, catalytic domain ATY47_02565 PF02954 Bacterial regulatory protein, Fis family ATY47_02575 PF01381 Helix-turn-helix ATY47_02600 PF02785 Biotin carboxylase C-terminal domain ATY47_02600 PF00289 Biotin carboxylase, N-terminal domain ATY47_02600 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ATY47_02610 PF00364 Biotin-requiring enzyme ATY47_02615 PF01220 Dehydroquinase class II ATY47_02625 PF11412 Disulphide bond corrector protein DsbC ATY47_02625 PF02683 Cytochrome C biogenesis protein transmembrane region ATY47_02630 PF03091 CutA1 divalent ion tolerance protein ATY47_02650 PF00270 DEAD/DEAH box helicase ATY47_02650 PF00271 Helicase conserved C-terminal domain ATY47_02650 PF17764 3′ DNA-binding domain (3′BD) ATY47_02650 PF18074 Primosomal protein N C-terminal domain ATY47_02650 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ATY47_02675 PF01554 MatE ATY47_02680 PF01343 Peptidase family S49 ATY47_02705 PF01300 Telomere recombination ATY47_02710 PF13368 Topoisomerase C-terminal repeat ATY47_02710 PF01751 Toprim domain ATY47_02710 PF01131 DNA topoisomerase ATY47_02720 PF00114 Pilin (bacterial filament) ATY47_02720 PF07963 Prokaryotic N-terminal methylation motif ATY47_02725 PF04361 Protein of unknown function (DUF494) ATY47_02730 PF17782 DprA winged helix domain ATY47_02730 PF02481 DNA recombination-mediator protein A ATY47_02735 PF01476 LysM domain ATY47_02740 PF01327 Polypeptide deformylase ATY47_02745 PF00551 Formyl transferase ATY47_02745 PF02911 Formyl transferase, C-terminal domain ATY47_02750 PF01029 NusB family ATY47_02750 PF01189 16S rRNA methyltransferase RsmB/F ATY47_02765 PF00535 Glycosyl transferase family 2 ATY47_02785 PF00925 GTP cyclohydrolase II ATY47_02795 PF03279 Bacterial lipid A biosynthesis acyltransferase ATY47_02800 PF02580 D-Tyr-tRNA(Tyr) deacylase ATY47_02805 PF04542 Sigma-70 region 2 ATY47_02805 PF00140 Sigma-70 factor, region 1.2 ATY47_02805 PF03979 Sigma-70 factor, region 1.1 ATY47_02805 PF04546 Sigma-70, non-essential region ATY47_02805 PF04545 Sigma-70, region 4 ATY47_02805 PF04539 Sigma-70 region 3 ATY47_02825 PF00589 Phage integrase family ATY47_02845 PF07996 Type IV secretion system proteins ATY47_02860 PF04610 TrbL/VirB6 plasmid conjugal transfer protein ATY47_02875 PF00145 C-5 cytosine-specific DNA methylase ATY47_02950 PF00005 ABC transporter ATY47_02965 PF00593 TonB dependent receptor ATY47_02965 PF07715 TonB-dependent Receptor Plug Domain ATY47_03015 PF02322 Cytochrome bd terminal oxidase subunit II ATY47_03020 PF01654 Cytochrome bd terminal oxidase subunit I ATY47_03025 PF02954 Bacterial regulatory protein, Fis family ATY47_03025 PF00072 Response regulator receiver domain ATY47_03025 PF00158 Sigma-54 interaction domain ATY47_03040 PF01739 CheR methyltransferase, SAM binding domain ATY47_03040 PF01339 CheB methylesterase ATY47_03040 PF08448 PAS fold ATY47_03040 PF03705 CheR methyltransferase, all-alpha domain ATY47_03060 PF00672 HAMP domain ATY47_03060 PF02743 Cache domain ATY47_03060 PF06580 Histidine kinase ATY47_03060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_03065 PF00072 Response regulator receiver domain ATY47_03065 PF04397 LytTr DNA-binding domain ATY47_03070 PF00072 Response regulator receiver domain ATY47_03070 PF04397 LytTr DNA-binding domain ATY47_03080 PF13520 Amino acid permease ATY47_03095 PF01431 Peptidase family M13 ATY47_03095 PF05649 Peptidase family M13 ATY47_03110 PF00248 Aldo/keto reductase family ATY47_03115 PF03358 NADPH-dependent FMN reductase ATY47_03125 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ATY47_03135 PF03167 Uracil DNA glycosylase superfamily ATY47_03140 PF02469 Fasciclin domain ATY47_03155 PF00999 Sodium/hydrogen exchanger family ATY47_03160 PF00005 ABC transporter ATY47_03165 PF01061 ABC-2 type transporter ATY47_03185 PF04151 Bacterial pre-peptidase C-terminal domain ATY47_03185 PF00082 Subtilase family ATY47_03195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_03195 PF00512 His Kinase A (phospho-acceptor) domain ATY47_03195 PF08448 PAS fold ATY47_03195 PF13188 PAS domain ATY47_03195 PF00072 Response regulator receiver domain ATY47_03200 PF00072 Response regulator receiver domain ATY47_03200 PF00486 Transcriptional regulatory protein, C terminal ATY47_03215 PF00691 OmpA family ATY47_03215 PF13677 Membrane MotB of proton-channel complex MotA/MotB ATY47_03220 PF01618 MotA/TolQ/ExbB proton channel family ATY47_03230 PF01641 SelR domain ATY47_03240 PF01037 Lrp/AsnC ligand binding domain ATY47_03245 PF01266 FAD dependent oxidoreductase ATY47_03250 PF00842 Alanine racemase, C-terminal domain ATY47_03250 PF01168 Alanine racemase, N-terminal domain ATY47_03270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_03270 PF00989 PAS fold ATY47_03270 PF00512 His Kinase A (phospho-acceptor) domain ATY47_03280 PF07995 Glucose / Sorbosone dehydrogenase ATY47_03295 PF05175 Methyltransferase small domain ATY47_03295 PF08468 Methyltransferase small domain N-terminal ATY47_03300 PF00849 RNA pseudouridylate synthase ATY47_03300 PF01479 S4 domain ATY47_03305 PF13419 Haloacid dehalogenase-like hydrolase ATY47_03335 PF04461 Protein of unknown function (DUF520) ATY47_03340 PF00892 EamA-like transporter family ATY47_03345 PF09383 NIL domain ATY47_03345 PF00005 ABC transporter ATY47_03350 PF00528 Binding-protein-dependent transport system inner membrane component ATY47_03355 PF03180 NLPA lipoprotein ATY47_03380 PF02817 e3 binding domain ATY47_03380 PF00364 Biotin-requiring enzyme ATY47_03380 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ATY47_03390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ATY47_03390 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY47_03410 PF00119 ATP synthase A chain ATY47_03415 PF00137 ATP synthase subunit C ATY47_03420 PF00430 ATP synthase B/B' CF(0) ATY47_03425 PF00213 ATP synthase delta (OSCP) subunit ATY47_03430 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATY47_03430 PF00306 ATP synthase alpha/beta chain, C terminal domain ATY47_03430 PF02874 ATP synthase alpha/beta family, beta-barrel domain ATY47_03435 PF00231 ATP synthase ATY47_03440 PF02874 ATP synthase alpha/beta family, beta-barrel domain ATY47_03440 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATY47_03445 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ATY47_03450 PF01817 Chorismate mutase type II ATY47_03460 PF14602 Hexapeptide repeat of succinyl-transferase ATY47_03460 PF12804 MobA-like NTP transferase domain ATY47_03460 PF00132 Bacterial transferase hexapeptide (six repeats) ATY47_03465 PF08448 PAS fold ATY47_03465 PF13426 PAS domain ATY47_03465 PF00072 Response regulator receiver domain ATY47_03465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_03465 PF00512 His Kinase A (phospho-acceptor) domain ATY47_03495 PF00005 ABC transporter ATY47_03495 PF08402 TOBE domain ATY47_03500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ATY47_03505 PF01380 SIS domain ATY47_03520 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_03535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ATY47_03540 PF05275 Copper resistance protein B precursor (CopB) ATY47_03545 PF07732 Multicopper oxidase ATY47_03545 PF07731 Multicopper oxidase ATY47_03545 PF00394 Multicopper oxidase ATY47_03560 PF01432 Peptidase family M3 ATY47_03570 PF02801 Beta-ketoacyl synthase, C-terminal domain ATY47_03570 PF00109 Beta-ketoacyl synthase, N-terminal domain ATY47_03575 PF07977 FabA-like domain ATY47_03580 PF00817 impB/mucB/samB family ATY47_03580 PF11799 impB/mucB/samB family C-terminal domain ATY47_03585 PF13419 Haloacid dehalogenase-like hydrolase ATY47_03595 PF13185 GAF domain ATY47_03610 PF01242 6-pyruvoyl tetrahydropterin synthase ATY47_03620 PF00270 DEAD/DEAH box helicase ATY47_03620 PF00271 Helicase conserved C-terminal domain ATY47_03630 PF13417 Glutathione S-transferase, N-terminal domain ATY47_03635 PF00437 Type II/IV secretion system protein ATY47_03655 PF00291 Pyridoxal-phosphate dependent enzyme ATY47_03655 PF00571 CBS domain ATY47_03660 PF01053 Cys/Met metabolism PLP-dependent enzyme ATY47_03665 PF01370 NAD dependent epimerase/dehydratase family ATY47_03695 PF00872 Transposase, Mutator family ATY47_03705 PF00005 ABC transporter ATY47_03715 PF00766 Electron transfer flavoprotein FAD-binding domain ATY47_03715 PF01012 Electron transfer flavoprotein domain ATY47_03720 PF01012 Electron transfer flavoprotein domain ATY47_03725 PF16363 GDP-mannose 4,6 dehydratase ATY47_03730 PF00483 Nucleotidyl transferase ATY47_03735 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ATY47_03740 PF04321 RmlD substrate binding domain ATY47_03745 PF01050 Mannose-6-phosphate isomerase ATY47_03745 PF00483 Nucleotidyl transferase ATY47_03750 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ATY47_03750 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ATY47_03750 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ATY47_03750 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ATY47_03755 PF01144 Coenzyme A transferase ATY47_03760 PF01144 Coenzyme A transferase ATY47_03765 PF14307 Glycosyltransferase WbsX ATY47_03765 PF05045 Rhamnan synthesis protein F ATY47_03785 PF02470 MlaD protein ATY47_03785 PF03886 ABC-type transport auxiliary lipoprotein component ATY47_03790 PF00005 ABC transporter ATY47_03795 PF02405 Permease MlaE ATY47_03805 PF00816 H-NS histone family ATY47_03810 PF04073 Aminoacyl-tRNA editing domain ATY47_03810 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ATY47_03810 PF03129 Anticodon binding domain ATY47_03820 PF01066 CDP-alcohol phosphatidyltransferase ATY47_03845 PF01609 Transposase DDE domain ATY47_03845 PF05598 Transposase domain (DUF772) ATY47_03855 PF01464 Transglycosylase SLT domain ATY47_03855 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ATY47_03860 PF00544 Pectate lyase ATY47_03885 PF13683 Integrase core domain ATY47_03885 PF13276 HTH-like domain ATY47_03890 PF01527 Transposase ATY47_03900 PF00133 tRNA synthetases class I (I, L, M and V) ATY47_03900 PF08264 Anticodon-binding domain of tRNA ATY47_03900 PF10458 Valyl tRNA synthetase tRNA binding arm ATY47_03915 PF02789 Cytosol aminopeptidase family, N-terminal domain ATY47_03915 PF00883 Cytosol aminopeptidase family, catalytic domain ATY47_03925 PF03739 Lipopolysaccharide export system permease LptF/LptG ATY47_03935 PF02899 Phage integrase, N-terminal SAM-like domain ATY47_03935 PF00589 Phage integrase family ATY47_03940 PF13098 Thioredoxin-like domain ATY47_03940 PF10411 Disulfide bond isomerase protein N-terminus ATY47_03945 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ATY47_03945 PF02769 AIR synthase related protein, C-terminal domain ATY47_03945 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ATY47_03950 PF03895 YadA-like membrane anchor domain ATY47_03950 PF05662 Coiled stalk of trimeric autotransporter adhesin ATY47_03950 PF13018 Extended Signal Peptide of Type V secretion system ATY47_03950 PF05658 Head domain of trimeric autotransporter adhesin ATY47_03970 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ATY47_03970 PF00437 Type II/IV secretion system protein ATY47_03980 PF00482 Type II secretion system (T2SS), protein F ATY47_03985 PF08334 Type II secretion system (T2SS), protein G ATY47_03990 PF12019 Type II transport protein GspH ATY47_03995 PF07963 Prokaryotic N-terminal methylation motif ATY47_04005 PF03934 Type II secretion system (T2SS), protein K ATY47_04010 PF05137 Fimbrial assembly protein (PilN) ATY47_04015 PF10741 Type II secretion system (T2SS), protein M subtype b ATY47_04025 PF00263 Bacterial type II and III secretion system protein ATY47_04025 PF03958 Bacterial type II/III secretion system short domain ATY47_04035 PF07702 UTRA domain ATY47_04035 PF00392 Bacterial regulatory proteins, gntR family ATY47_04045 PF07715 TonB-dependent Receptor Plug Domain ATY47_04045 PF00593 TonB dependent receptor ATY47_04070 PF09827 CRISPR associated protein Cas2 ATY47_04075 PF01867 CRISPR associated protein Cas1 ATY47_04095 PF09704 CRISPR-associated protein (Cas_Cas5) ATY47_04110 PF02545 Maf-like protein ATY47_04115 PF02620 Large ribosomal RNA subunit accumulation protein YceD ATY47_04120 PF01783 Ribosomal L32p protein family ATY47_04125 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ATY47_04125 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ATY47_04135 PF00698 Acyl transferase domain ATY47_04145 PF00550 Phosphopantetheine attachment site ATY47_04150 PF02801 Beta-ketoacyl synthase, C-terminal domain ATY47_04150 PF00109 Beta-ketoacyl synthase, N-terminal domain ATY47_04155 PF00425 chorismate binding enzyme ATY47_04155 PF04715 Anthranilate synthase component I, N terminal region ATY47_04160 PF02618 YceG-like family ATY47_04165 PF09115 DNA polymerase III, delta subunit, C terminal ATY47_04185 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_04200 PF02954 Bacterial regulatory protein, Fis family ATY47_04200 PF06506 Propionate catabolism activator ATY47_04200 PF00158 Sigma-54 interaction domain ATY47_04210 PF00285 Citrate synthase, C-terminal domain ATY47_04215 PF00330 Aconitase family (aconitate hydratase) ATY47_04215 PF00694 Aconitase C-terminal domain ATY47_04220 PF04303 PrpF protein ATY47_04225 PF05598 Transposase domain (DUF772) ATY47_04225 PF01609 Transposase DDE domain ATY47_04230 PF07715 TonB-dependent Receptor Plug Domain ATY47_04230 PF00593 TonB dependent receptor ATY47_04265 PF00665 Integrase core domain ATY47_04265 PF13936 Helix-turn-helix domain ATY47_04275 PF08534 Redoxin ATY47_04285 PF00226 DnaJ domain ATY47_04285 PF01556 DnaJ C terminal domain ATY47_04290 PF00072 Response regulator receiver domain ATY47_04295 PF12221 Bacterial membrane protein N terminal ATY47_04295 PF01145 SPFH domain / Band 7 family ATY47_04300 PF01145 SPFH domain / Band 7 family ATY47_04310 PF00709 Adenylosuccinate synthetase ATY47_04315 PF01433 Peptidase family M1 domain ATY47_04315 PF11838 ERAP1-like C-terminal domain ATY47_04325 PF05598 Transposase domain (DUF772) ATY47_04340 PF01609 Transposase DDE domain ATY47_04340 PF05598 Transposase domain (DUF772) ATY47_04360 PF03279 Bacterial lipid A biosynthesis acyltransferase ATY47_04365 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ATY47_04370 PF02321 Outer membrane efflux protein ATY47_04400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY47_04405 PF00330 Aconitase family (aconitate hydratase) ATY47_04410 PF00694 Aconitase C-terminal domain ATY47_04420 PF00180 Isocitrate/isopropylmalate dehydrogenase ATY47_04425 PF00682 HMGL-like ATY47_04425 PF08502 LeuA allosteric (dimerisation) domain ATY47_04430 PF00291 Pyridoxal-phosphate dependent enzyme ATY47_04440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ATY47_04440 PF00205 Thiamine pyrophosphate enzyme, central domain ATY47_04440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ATY47_04445 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ATY47_04445 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ATY47_04450 PF01964 Radical SAM ThiC family ATY47_04450 PF13667 ThiC-associated domain ATY47_04455 PF00486 Transcriptional regulatory protein, C terminal ATY47_04455 PF18500 CadC C-terminal domain 1 ATY47_04460 PF12833 Helix-turn-helix domain ATY47_04465 PF07715 TonB-dependent Receptor Plug Domain ATY47_04465 PF00593 TonB dependent receptor ATY47_04475 PF00719 Inorganic pyrophosphatase ATY47_04505 PF00365 Phosphofructokinase ATY47_04515 PF08245 Mur ligase middle domain ATY47_04515 PF02875 Mur ligase family, glutamate ligase domain ATY47_04515 PF01225 Mur ligase family, catalytic domain ATY47_04525 PF01062 Bestrophin, RFP-TM, chloride channel ATY47_04540 PF02798 Glutathione S-transferase, N-terminal domain ATY47_04540 PF00043 Glutathione S-transferase, C-terminal domain ATY47_04545 PF00056 lactate/malate dehydrogenase, NAD binding domain ATY47_04545 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ATY47_04550 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ATY47_04575 PF01474 Class-II DAHP synthetase family ATY47_04585 PF02600 Disulfide bond formation protein DsbB ATY47_04595 PF01527 Transposase ATY47_04600 PF13683 Integrase core domain ATY47_04600 PF13276 HTH-like domain ATY47_04645 PF00665 Integrase core domain ATY47_04645 PF13936 Helix-turn-helix domain ATY47_04675 PF01527 Transposase ATY47_04705 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_04725 PF01609 Transposase DDE domain ATY47_04725 PF05598 Transposase domain (DUF772) ATY47_04745 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_04750 PF03009 Glycerophosphoryl diester phosphodiesterase family ATY47_04780 PF18324 Hypothetical protein TT1725 ATY47_04780 PF00180 Isocitrate/isopropylmalate dehydrogenase ATY47_04810 PF01527 Transposase ATY47_04835 PF05697 Bacterial trigger factor protein (TF) ATY47_04835 PF05698 Bacterial trigger factor protein (TF) C-terminus ATY47_04840 PF00574 Clp protease ATY47_04845 PF06689 ClpX C4-type zinc finger ATY47_04845 PF10431 C-terminal, D2-small domain, of ClpB protein ATY47_04845 PF07724 AAA domain (Cdc48 subfamily) ATY47_04850 PF00004 ATPase family associated with various cellular activities (AAA) ATY47_04850 PF02190 ATP-dependent protease La (LON) substrate-binding domain ATY47_04850 PF05362 Lon protease (S16) C-terminal proteolytic domain ATY47_04855 PF00216 Bacterial DNA-binding protein ATY47_04880 PF01476 LysM domain ATY47_04880 PF05257 CHAP domain ATY47_04885 PF00753 Metallo-beta-lactamase superfamily ATY47_04885 PF16123 Hydroxyacylglutathione hydrolase C-terminus ATY47_04895 PF00075 RNase H ATY47_04900 PF00929 Exonuclease ATY47_04930 PF16671 Actin cross-linking domain ATY47_04930 PF04717 Type VI secretion system, phage-baseplate injector ATY47_04990 PF00589 Phage integrase family ATY47_04990 PF13356 Arm DNA-binding domain ATY47_05000 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ATY47_05010 PF00753 Metallo-beta-lactamase superfamily ATY47_05010 PF12706 Beta-lactamase superfamily domain ATY47_05015 PF06463 Molybdenum Cofactor Synthesis C ATY47_05015 PF04055 Radical SAM superfamily ATY47_05025 PF01967 MoaC family ATY47_05030 PF02597 ThiS family ATY47_05035 PF02391 MoaE protein ATY47_05045 PF12169 DNA polymerase III subunits gamma and tau domain III ATY47_05045 PF12170 DNA polymerase III tau subunit V interacting with alpha ATY47_05045 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ATY47_05050 PF02575 YbaB/EbfC DNA-binding family ATY47_05055 PF13662 Toprim domain ATY47_05055 PF02132 RecR protein ATY47_05060 PF01230 HIT domain ATY47_05070 PF11992 Domain of unknown function (DUF3488) ATY47_05070 PF13559 Domain of unknown function (DUF4129) ATY47_05070 PF01841 Transglutaminase-like superfamily ATY47_05080 PF07726 ATPase family associated with various cellular activities (AAA) ATY47_05080 PF17863 AAA lid domain ATY47_05100 PF01327 Polypeptide deformylase ATY47_05135 PF01609 Transposase DDE domain ATY47_05135 PF05598 Transposase domain (DUF772) ATY47_05155 PF00462 Glutaredoxin ATY47_05160 PF01522 Polysaccharide deacetylase ATY47_05180 PF03193 RsgA GTPase ATY47_05195 PF00128 Alpha amylase, catalytic domain ATY47_05210 PF00356 Bacterial regulatory proteins, lacI family ATY47_05215 PF00106 short chain dehydrogenase ATY47_05220 PF03600 Citrate transporter ATY47_05230 PF00486 Transcriptional regulatory protein, C terminal ATY47_05230 PF00072 Response regulator receiver domain ATY47_05235 PF00512 His Kinase A (phospho-acceptor) domain ATY47_05235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_05235 PF08521 Two-component sensor kinase N-terminal ATY47_05245 PF00196 Bacterial regulatory proteins, luxR family ATY47_05245 PF00072 Response regulator receiver domain ATY47_05270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY47_05270 PF03466 LysR substrate binding domain ATY47_05280 PF07690 Major Facilitator Superfamily ATY47_05285 PF00512 His Kinase A (phospho-acceptor) domain ATY47_05285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_05295 PF00375 Sodium:dicarboxylate symporter family ATY47_05300 PF00390 Malic enzyme, N-terminal domain ATY47_05300 PF01515 Phosphate acetyl/butaryl transferase ATY47_05300 PF03949 Malic enzyme, NAD binding domain ATY47_05310 PF01527 Transposase ATY47_05315 PF13683 Integrase core domain ATY47_05315 PF13276 HTH-like domain ATY47_05325 PF01527 Transposase ATY47_05340 PF02581 Thiamine monophosphate synthase ATY47_05345 PF00301 Rubredoxin ATY47_05350 PF13369 Transglutaminase-like superfamily ATY47_05360 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ATY47_05370 PF01812 5-formyltetrahydrofolate cyclo-ligase family ATY47_05375 PF05164 Cell division protein ZapA ATY47_05385 PF03695 Uncharacterised protein family (UPF0149) ATY47_05390 PF00557 Metallopeptidase family M24 ATY47_05390 PF05195 Aminopeptidase P, N-terminal domain ATY47_05405 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_05410 PF00557 Metallopeptidase family M24 ATY47_05425 PF06969 HemN C-terminal domain ATY47_05425 PF04055 Radical SAM superfamily ATY47_05430 PF01725 Ham1 family ATY47_05440 PF03725 3' exoribonuclease family, domain 2 ATY47_05440 PF01138 3' exoribonuclease family, domain 1 ATY47_05445 PF03755 YicC-like family, N-terminal region ATY47_05445 PF08340 Domain of unknown function (DUF1732) ATY47_05450 PF00625 Guanylate kinase ATY47_05460 PF01192 RNA polymerase Rpb6 ATY47_05465 PF13291 ACT domain ATY47_05465 PF04607 Region found in RelA / SpoT proteins ATY47_05465 PF02824 TGS domain ATY47_05470 PF01042 Endoribonuclease L-PSP ATY47_05475 PF00270 DEAD/DEAH box helicase ATY47_05475 PF17191 RecG wedge domain ATY47_05475 PF00271 Helicase conserved C-terminal domain ATY47_05480 PF01156 Inosine-uridine preferring nucleoside hydrolase ATY47_05485 PF01197 Ribosomal protein L31 ATY47_05490 PF00285 Citrate synthase, C-terminal domain ATY47_05505 PF17092 Penicillin-binding protein OB-like domain ATY47_05505 PF00905 Penicillin binding protein transpeptidase domain ATY47_05505 PF00912 Transglycosylase ATY47_05530 PF00263 Bacterial type II and III secretion system protein ATY47_05530 PF07660 Secretin and TonB N terminus short domain ATY47_05530 PF11741 AMIN domain ATY47_05530 PF03958 Bacterial type II/III secretion system short domain ATY47_05550 PF07726 ATPase family associated with various cellular activities (AAA) ATY47_05550 PF17863 AAA lid domain ATY47_05570 PF07584 Aerotolerance regulator N-terminal ATY47_05570 PF00092 von Willebrand factor type A domain ATY47_05585 PF00375 Sodium:dicarboxylate symporter family ATY47_05590 PF02779 Transketolase, pyrimidine binding domain ATY47_05590 PF00456 Transketolase, thiamine diphosphate binding domain ATY47_05590 PF02780 Transketolase, C-terminal domain ATY47_05595 PF00593 TonB dependent receptor ATY47_05595 PF07715 TonB-dependent Receptor Plug Domain ATY47_05600 PF01551 Peptidase family M23 ATY47_05600 PF04225 Opacity-associated protein A LysM-like domain ATY47_05605 PF03734 L,D-transpeptidase catalytic domain ATY47_05605 PF01476 LysM domain ATY47_05630 PF00501 AMP-binding enzyme ATY47_05650 PF00072 Response regulator receiver domain ATY47_05650 PF00486 Transcriptional regulatory protein, C terminal ATY47_05655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_05655 PF00512 His Kinase A (phospho-acceptor) domain ATY47_05655 PF08521 Two-component sensor kinase N-terminal ATY47_05675 PF03459 TOBE domain ATY47_05675 PF00005 ABC transporter ATY47_05680 PF00528 Binding-protein-dependent transport system inner membrane component ATY47_05690 PF00753 Metallo-beta-lactamase superfamily ATY47_05690 PF04273 Putative phosphatase (DUF442) ATY47_05725 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ATY47_05725 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ATY47_05730 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_05745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_05745 PF00672 HAMP domain ATY47_05745 PF00512 His Kinase A (phospho-acceptor) domain ATY47_05750 PF00072 Response regulator receiver domain ATY47_05750 PF00486 Transcriptional regulatory protein, C terminal ATY47_05760 PF18030 RimK PreATP-grasp domain ATY47_05760 PF08443 RimK-like ATP-grasp domain ATY47_05800 PF00027 Cyclic nucleotide-binding domain ATY47_05800 PF00520 Ion transport protein ATY47_05805 PF00202 Aminotransferase class-III ATY47_05820 PF01593 Flavin containing amine oxidoreductase ATY47_05825 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ATY47_05825 PF00034 Cytochrome c ATY47_05840 PF00155 Aminotransferase class I and II ATY47_05850 PF00127 Copper binding proteins, plastocyanin/azurin family ATY47_05860 PF00202 Aminotransferase class-III ATY47_05885 PF03377 TAL effector repeat ATY47_05915 PF03377 TAL effector repeat ATY47_05970 PF01208 Uroporphyrinogen decarboxylase (URO-D) ATY47_05980 PF01761 3-dehydroquinate synthase ATY47_05985 PF01202 Shikimate kinase ATY47_05990 PF01243 Pyridoxamine 5'-phosphate oxidase ATY47_05990 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ATY47_06000 PF04012 PspA/IM30 family ATY47_06025 PF03738 Glutathionylspermidine synthase preATP-grasp ATY47_06045 PF00376 MerR family regulatory protein ATY47_06045 PF09278 MerR, DNA binding ATY47_06080 PF12706 Beta-lactamase superfamily domain ATY47_06100 PF00324 Amino acid permease ATY47_06105 PF00196 Bacterial regulatory proteins, luxR family ATY47_06110 PF00561 alpha/beta hydrolase fold ATY47_06115 PF00324 Amino acid permease ATY47_06125 PF01654 Cytochrome bd terminal oxidase subunit I ATY47_06130 PF02322 Cytochrome bd terminal oxidase subunit II ATY47_06135 PF00756 Putative esterase ATY47_06140 PF00571 CBS domain ATY47_06140 PF01769 Divalent cation transporter ATY47_06140 PF03448 MgtE intracellular N domain ATY47_06145 PF05524 PEP-utilising enzyme, N-terminal ATY47_06145 PF00391 PEP-utilising enzyme, mobile domain ATY47_06145 PF02896 PEP-utilising enzyme, TIM barrel domain ATY47_06150 PF00381 PTS HPr component phosphorylation site ATY47_06160 PF03668 P-loop ATPase protein family ATY47_06165 PF02603 HPr Serine kinase N terminus ATY47_06165 PF07475 HPr Serine kinase C-terminal domain ATY47_06170 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ATY47_06175 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ATY47_06180 PF04552 Sigma-54, DNA binding domain ATY47_06180 PF00309 Sigma-54 factor, Activator interacting domain (AID) ATY47_06180 PF04963 Sigma-54 factor, core binding domain ATY47_06185 PF00005 ABC transporter ATY47_06190 PF03968 OstA-like protein ATY47_06205 PF00571 CBS domain ATY47_06205 PF01380 SIS domain ATY47_06210 PF01722 BolA-like protein ATY47_06215 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ATY47_06235 PF00551 Formyl transferase ATY47_06250 PF02769 AIR synthase related protein, C-terminal domain ATY47_06250 PF00586 AIR synthase related protein, N-terminal domain ATY47_06260 PF01594 AI-2E family transporter ATY47_06265 PF00308 Bacterial dnaA protein ATY47_06270 PF00483 Nucleotidyl transferase ATY47_06275 PF01636 Phosphotransferase enzyme family ATY47_06295 PF01546 Peptidase family M20/M25/M40 ATY47_06295 PF07687 Peptidase dimerisation domain ATY47_06310 PF01527 Transposase ATY47_06345 PF06964 Alpha-L-arabinofuranosidase C-terminal domain ATY47_06350 PF01263 Aldose 1-epimerase ATY47_06355 PF01578 Cytochrome C assembly protein ATY47_06365 PF02881 SRP54-type protein, helical bundle domain ATY47_06365 PF02978 Signal peptide binding domain ATY47_06365 PF00448 SRP54-type protein, GTPase domain ATY47_06375 PF03060 Nitronate monooxygenase ATY47_06385 PF00886 Ribosomal protein S16 ATY47_06390 PF01782 RimM N-terminal domain ATY47_06390 PF05239 PRC-barrel domain ATY47_06395 PF01746 tRNA (Guanine-1)-methyltransferase ATY47_06400 PF01245 Ribosomal protein L19 ATY47_06405 PF01554 MatE ATY47_06410 PF01479 S4 domain ATY47_06430 PF01541 GIY-YIG catalytic domain ATY47_06435 PF10431 C-terminal, D2-small domain, of ClpB protein ATY47_06435 PF00004 ATPase family associated with various cellular activities (AAA) ATY47_06435 PF02861 Clp amino terminal domain, pathogenicity island component ATY47_06435 PF07724 AAA domain (Cdc48 subfamily) ATY47_06435 PF17871 AAA lid domain ATY47_06450 PF01527 Transposase ATY47_06465 PF07715 TonB-dependent Receptor Plug Domain ATY47_06465 PF00593 TonB dependent receptor ATY47_06485 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ATY47_06485 PF12557 Cob(I)alamin adenosyltransferase N terminal ATY47_06495 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ATY47_06500 PF02277 Phosphoribosyltransferase ATY47_06510 PF02654 Cobalamin-5-phosphate synthase ATY47_06515 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ATY47_06515 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ATY47_06525 PF07690 Major Facilitator Superfamily ATY47_06530 PF04183 IucA / IucC family ATY47_06530 PF06276 Ferric iron reductase FhuF-like transporter ATY47_06540 PF07660 Secretin and TonB N terminus short domain ATY47_06540 PF00593 TonB dependent receptor ATY47_06540 PF07715 TonB-dependent Receptor Plug Domain ATY47_06550 PF13276 HTH-like domain ATY47_06550 PF13683 Integrase core domain ATY47_06555 PF00999 Sodium/hydrogen exchanger family ATY47_06555 PF02254 TrkA-N domain ATY47_06565 PF00593 TonB dependent receptor ATY47_06565 PF07715 TonB-dependent Receptor Plug Domain ATY47_06570 PF00593 TonB dependent receptor ATY47_06570 PF07715 TonB-dependent Receptor Plug Domain ATY47_06580 PF07715 TonB-dependent Receptor Plug Domain ATY47_06580 PF00593 TonB dependent receptor ATY47_06585 PF12848 ABC transporter ATY47_06585 PF00005 ABC transporter ATY47_06600 PF03466 LysR substrate binding domain ATY47_06600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY47_06610 PF13472 GDSL-like Lipase/Acylhydrolase family ATY47_06610 PF07859 alpha/beta hydrolase fold ATY47_06635 PF12833 Helix-turn-helix domain ATY47_06640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_06640 PF00183 Hsp90 protein ATY47_06655 PF13276 HTH-like domain ATY47_06660 PF01527 Transposase ATY47_06670 PF00872 Transposase, Mutator family ATY47_06685 PF01053 Cys/Met metabolism PLP-dependent enzyme ATY47_06700 PF13276 HTH-like domain ATY47_06700 PF13683 Integrase core domain ATY47_06705 PF01527 Transposase ATY47_06710 PF01609 Transposase DDE domain ATY47_06710 PF05598 Transposase domain (DUF772) ATY47_06715 PF00355 Rieske [2Fe-2S] domain ATY47_06725 PF00266 Aminotransferase class-V ATY47_06730 PF01458 Uncharacterized protein family (UPF0051) ATY47_06735 PF00005 ABC transporter ATY47_06740 PF01458 Uncharacterized protein family (UPF0051) ATY47_06745 PF02082 Transcriptional regulator ATY47_06795 PF14748 Pyrroline-5-carboxylate reductase dimerisation ATY47_06795 PF03807 NADP oxidoreductase coenzyme F420-dependent ATY47_06800 PF01168 Alanine racemase, N-terminal domain ATY47_06805 PF00437 Type II/IV secretion system protein ATY47_06810 PF00437 Type II/IV secretion system protein ATY47_06825 PF00958 GMP synthase C terminal domain ATY47_06825 PF00117 Glutamine amidotransferase class-I ATY47_06825 PF13302 Acetyltransferase (GNAT) domain ATY47_06825 PF03352 Methyladenine glycosylase ATY47_06825 PF13673 Acetyltransferase (GNAT) domain ATY47_06840 PF02622 Uncharacterized ACR, COG1678 ATY47_06845 PF03652 Holliday junction resolvase ATY47_06850 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ATY47_06850 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ATY47_06855 PF02566 OsmC-like protein ATY47_06865 PF02567 Phenazine biosynthesis-like protein ATY47_06870 PF02567 Phenazine biosynthesis-like protein ATY47_06875 PF02567 Phenazine biosynthesis-like protein ATY47_06880 PF01842 ACT domain ATY47_06880 PF00696 Amino acid kinase family ATY47_06895 PF08245 Mur ligase middle domain ATY47_06910 PF00348 Polyprenyl synthetase ATY47_06915 PF00436 Single-strand binding protein family ATY47_06920 PF00360 Phytochrome region ATY47_06920 PF00990 Diguanylate cyclase, GGDEF domain ATY47_06920 PF01590 GAF domain ATY47_06920 PF00563 EAL domain ATY47_06925 PF16197 Ketoacyl-synthetase C-terminal extension ATY47_06925 PF00698 Acyl transferase domain ATY47_06925 PF02801 Beta-ketoacyl synthase, C-terminal domain ATY47_06925 PF00107 Zinc-binding dehydrogenase ATY47_06925 PF08659 KR domain ATY47_06925 PF00550 Phosphopantetheine attachment site ATY47_06925 PF08240 Alcohol dehydrogenase GroES-like domain ATY47_06925 PF14765 Polyketide synthase dehydratase ATY47_06925 PF00109 Beta-ketoacyl synthase, N-terminal domain ATY47_06950 PF04328 Selenoprotein, putative ATY47_06955 PF13722 5TM C-terminal transporter carbon starvation CstA ATY47_06955 PF02554 Carbon starvation protein CstA ATY47_06960 PF05726 Pirin C-terminal cupin domain ATY47_06960 PF02678 Pirin ATY47_06970 PF04717 Type VI secretion system, phage-baseplate injector ATY47_06995 PF04717 Type VI secretion system, phage-baseplate injector ATY47_07035 PF05726 Pirin C-terminal cupin domain ATY47_07035 PF02678 Pirin ATY47_07045 PF04493 Endonuclease V ATY47_07050 PF00300 Histidine phosphatase superfamily (branch 1) ATY47_07060 PF05649 Peptidase family M13 ATY47_07060 PF01431 Peptidase family M13 ATY47_07070 PF01339 CheB methylesterase ATY47_07070 PF00072 Response regulator receiver domain ATY47_07075 PF01739 CheR methyltransferase, SAM binding domain ATY47_07075 PF03705 CheR methyltransferase, all-alpha domain ATY47_07080 PF13426 PAS domain ATY47_07080 PF00990 Diguanylate cyclase, GGDEF domain ATY47_07080 PF00563 EAL domain ATY47_07085 PF01584 CheW-like domain ATY47_07090 PF00672 HAMP domain ATY47_07090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY47_07090 PF02203 Tar ligand binding domain homologue ATY47_07095 PF01584 CheW-like domain ATY47_07095 PF01627 Hpt domain ATY47_07095 PF09078 CheY binding ATY47_07095 PF02895 Signal transducing histidine kinase, homodimeric domain ATY47_07095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_07105 PF02559 CarD-like/TRCF domain ATY47_07105 PF00271 Helicase conserved C-terminal domain ATY47_07105 PF17757 UvrB interaction domain ATY47_07105 PF00270 DEAD/DEAH box helicase ATY47_07105 PF03461 TRCF domain ATY47_07115 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ATY47_07125 PF00512 His Kinase A (phospho-acceptor) domain ATY47_07125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_07125 PF00672 HAMP domain ATY47_07150 PF05598 Transposase domain (DUF772) ATY47_07150 PF01609 Transposase DDE domain ATY47_07170 PF05598 Transposase domain (DUF772) ATY47_07170 PF01609 Transposase DDE domain ATY47_07190 PF01609 Transposase DDE domain ATY47_07190 PF05598 Transposase domain (DUF772) ATY47_07205 PF00749 tRNA synthetases class I (E and Q), catalytic domain ATY47_07210 PF01475 Ferric uptake regulator family ATY47_07235 PF00313 'Cold-shock' DNA-binding domain ATY47_07250 PF00899 ThiF family ATY47_07255 PF01026 TatD related DNase ATY47_07270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATY47_07270 PF02770 Acyl-CoA dehydrogenase, middle domain ATY47_07270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATY47_07295 PF13417 Glutathione S-transferase, N-terminal domain ATY47_07300 PF13537 Glutamine amidotransferase domain ATY47_07300 PF00733 Asparagine synthase ATY47_07305 PF03358 NADPH-dependent FMN reductase ATY47_07310 PF00772 DnaB-like helicase N terminal domain ATY47_07310 PF03796 DnaB-like helicase C terminal domain ATY47_07315 PF03441 FAD binding domain of DNA photolyase ATY47_07315 PF00875 DNA photolyase ATY47_07325 PF00691 OmpA family ATY47_07325 PF05736 OprF membrane domain ATY47_07345 PF07715 TonB-dependent Receptor Plug Domain ATY47_07345 PF00593 TonB dependent receptor ATY47_07365 PF00107 Zinc-binding dehydrogenase ATY47_07365 PF08240 Alcohol dehydrogenase GroES-like domain ATY47_07370 PF00654 Voltage gated chloride channel ATY47_07380 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ATY47_07380 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ATY47_07385 PF12833 Helix-turn-helix domain ATY47_07385 PF00730 HhH-GPD superfamily base excision DNA repair protein ATY47_07385 PF06029 AlkA N-terminal domain ATY47_07385 PF02805 Metal binding domain of Ada ATY47_07435 PF00271 Helicase conserved C-terminal domain ATY47_07435 PF00270 DEAD/DEAH box helicase ATY47_07435 PF03880 DbpA RNA binding domain ATY47_07440 PF08448 PAS fold ATY47_07440 PF00990 Diguanylate cyclase, GGDEF domain ATY47_07440 PF00563 EAL domain ATY47_07445 PF01479 S4 domain ATY47_07445 PF00849 RNA pseudouridylate synthase ATY47_07460 PF03737 Aldolase/RraA ATY47_07465 PF00144 Beta-lactamase ATY47_07470 PF00999 Sodium/hydrogen exchanger family ATY47_07475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_07475 PF00672 HAMP domain ATY47_07475 PF00512 His Kinase A (phospho-acceptor) domain ATY47_07480 PF00072 Response regulator receiver domain ATY47_07480 PF00486 Transcriptional regulatory protein, C terminal ATY47_07485 PF02321 Outer membrane efflux protein ATY47_07500 PF00873 AcrB/AcrD/AcrF family ATY47_07510 PF00005 ABC transporter ATY47_07510 PF00664 ABC transporter transmembrane region ATY47_07520 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_07530 PF01609 Transposase DDE domain ATY47_07530 PF05598 Transposase domain (DUF772) ATY47_07540 PF05598 Transposase domain (DUF772) ATY47_07540 PF01609 Transposase DDE domain ATY47_07550 PF01609 Transposase DDE domain ATY47_07550 PF05598 Transposase domain (DUF772) ATY47_07570 PF01121 Dephospho-CoA kinase ATY47_07575 PF06750 Bacterial Peptidase A24 N-terminal domain ATY47_07575 PF01478 Type IV leader peptidase family ATY47_07580 PF00482 Type II secretion system (T2SS), protein F ATY47_07585 PF00114 Pilin (bacterial filament) ATY47_07585 PF07963 Prokaryotic N-terminal methylation motif ATY47_07590 PF08019 Phosphoethanolamine transferase EptA/EptB ATY47_07590 PF00884 Sulfatase ATY47_07605 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ATY47_07605 PF00437 Type II/IV secretion system protein ATY47_07610 PF18543 Intracellular delivery domain ATY47_07610 PF02661 Fic/DOC family ATY47_07615 PF02954 Bacterial regulatory protein, Fis family ATY47_07615 PF00072 Response regulator receiver domain ATY47_07615 PF00158 Sigma-54 interaction domain ATY47_07620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_07620 PF00512 His Kinase A (phospho-acceptor) domain ATY47_07625 PF00549 CoA-ligase ATY47_07625 PF08442 ATP-grasp domain ATY47_07630 PF00549 CoA-ligase ATY47_07630 PF02629 CoA binding domain ATY47_07640 PF00795 Carbon-nitrogen hydrolase ATY47_07640 PF02540 NAD synthase ATY47_07645 PF13525 Outer membrane lipoprotein ATY47_07650 PF00849 RNA pseudouridylate synthase ATY47_07670 PF00982 Glycosyltransferase family 20 ATY47_07675 PF00723 Glycosyl hydrolases family 15 ATY47_07680 PF02358 Trehalose-phosphatase ATY47_07690 PF07715 TonB-dependent Receptor Plug Domain ATY47_07690 PF00593 TonB dependent receptor ATY47_07715 PF04376 Arginine-tRNA-protein transferase, N terminus ATY47_07715 PF04377 Arginine-tRNA-protein transferase, C terminus ATY47_07730 PF08281 Sigma-70, region 4 ATY47_07730 PF04542 Sigma-70 region 2 ATY47_07745 PF00378 Enoyl-CoA hydratase/isomerase ATY47_07760 PF17755 UvrA DNA-binding domain ATY47_07760 PF00005 ABC transporter ATY47_07760 PF17760 UvrA interaction domain ATY47_07765 PF00829 Ribosomal prokaryotic L21 protein ATY47_07770 PF01016 Ribosomal L27 protein ATY47_07775 PF01926 50S ribosome-binding GTPase ATY47_07775 PF01018 GTP1/OBG ATY47_07780 PF01649 Ribosomal protein S20 ATY47_07785 PF03023 Lipid II flippase MurJ ATY47_07790 PF01687 Riboflavin kinase ATY47_07790 PF06574 FAD synthetase ATY47_07795 PF06827 Zinc finger found in FPG and IleRS ATY47_07795 PF08264 Anticodon-binding domain of tRNA ATY47_07795 PF00133 tRNA synthetases class I (I, L, M and V) ATY47_07800 PF01252 Signal peptidase (SPase) II ATY47_07805 PF02401 LytB protein ATY47_07815 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ATY47_07815 PF06481 COX Aromatic Rich Motif ATY47_07820 PF00115 Cytochrome C and Quinol oxidase polypeptide I ATY47_07825 PF00510 Cytochrome c oxidase subunit III ATY47_07830 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ATY47_07840 PF04717 Type VI secretion system, phage-baseplate injector ATY47_07850 PF03527 RHS protein ATY47_07850 PF14220 Domain of unknown function (DUF4329) ATY47_07850 PF03527 RHS protein ATY47_07850 PF05593 RHS Repeat ATY47_07850 PF14220 Domain of unknown function (DUF4329) ATY47_07850 PF05593 RHS Repeat ATY47_07865 PF01527 Transposase ATY47_07870 PF13276 HTH-like domain ATY47_07870 PF13683 Integrase core domain ATY47_07885 PF05192 MutS domain III ATY47_07885 PF05188 MutS domain II ATY47_07885 PF01624 MutS domain I ATY47_07885 PF05190 MutS family domain IV ATY47_07885 PF00488 MutS domain V ATY47_07895 PF13683 Integrase core domain ATY47_07895 PF13276 HTH-like domain ATY47_07900 PF01527 Transposase ATY47_07910 PF18073 Rubredoxin metal binding domain ATY47_07920 PF01527 Transposase ATY47_07930 PF05506 Domain of unknown function (DUF756) ATY47_07930 PF04185 Phosphoesterase family ATY47_07935 PF04185 Phosphoesterase family ATY47_07935 PF05506 Domain of unknown function (DUF756) ATY47_07940 PF04185 Phosphoesterase family ATY47_07940 PF05506 Domain of unknown function (DUF756) ATY47_07960 PF01336 OB-fold nucleic acid binding domain ATY47_07960 PF00152 tRNA synthetases class II (D, K and N) ATY47_07960 PF02938 GAD domain ATY47_07975 PF01709 Transcriptional regulator ATY47_07980 PF02075 Crossover junction endodeoxyribonuclease RuvC ATY47_07985 PF07499 RuvA, C-terminal domain ATY47_07985 PF01330 RuvA N terminal domain ATY47_07990 PF02705 K+ potassium transporter ATY47_07995 PF05496 Holliday junction DNA helicase RuvB P-loop domain ATY47_07995 PF05491 RuvB C-terminal winged helix domain ATY47_07995 PF17864 RuvB AAA lid domain ATY47_08000 PF03061 Thioesterase superfamily ATY47_08005 PF01618 MotA/TolQ/ExbB proton channel family ATY47_08010 PF02472 Biopolymer transport protein ExbD/TolR ATY47_08020 PF07676 WD40-like Beta Propeller Repeat ATY47_08020 PF04052 TolB amino-terminal domain ATY47_08025 PF00691 OmpA family ATY47_08035 PF04055 Radical SAM superfamily ATY47_08040 PF01479 S4 domain ATY47_08040 PF00849 RNA pseudouridylate synthase ATY47_08085 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_08090 PF05598 Transposase domain (DUF772) ATY47_08095 PF06508 Queuosine biosynthesis protein QueC ATY47_08255 PF00182 Chitinase class I ATY47_08310 PF01555 DNA methylase ATY47_08335 PF00817 impB/mucB/samB family ATY47_08335 PF11798 IMS family HHH motif ATY47_08335 PF13438 Domain of unknown function (DUF4113) ATY47_08335 PF11799 impB/mucB/samB family C-terminal domain ATY47_08350 PF00271 Helicase conserved C-terminal domain ATY47_08350 PF00570 HRDC domain ATY47_08350 PF16124 RecQ zinc-binding ATY47_08350 PF00270 DEAD/DEAH box helicase ATY47_08350 PF09382 RQC domain ATY47_08355 PF00210 Ferritin-like domain ATY47_08360 PF04408 Helicase associated domain (HA2) ATY47_08360 PF00270 DEAD/DEAH box helicase ATY47_08360 PF00271 Helicase conserved C-terminal domain ATY47_08360 PF11898 Domain of unknown function (DUF3418) ATY47_08360 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ATY47_08370 PF02685 Glucokinase ATY47_08375 PF02685 Glucokinase ATY47_08380 PF02685 Glucokinase ATY47_08390 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_08405 PF13186 Iron-sulfur cluster-binding domain ATY47_08405 PF04055 Radical SAM superfamily ATY47_08410 PF05402 Coenzyme PQQ synthesis protein D (PqqD) ATY47_08415 PF03070 TENA/THI-4/PQQC family ATY47_08420 PF12706 Beta-lactamase superfamily domain ATY47_08425 PF13291 ACT domain ATY47_08425 PF02824 TGS domain ATY47_08425 PF04607 Region found in RelA / SpoT proteins ATY47_08435 PF00535 Glycosyl transferase family 2 ATY47_08440 PF14814 Bifunctional transglycosylase second domain ATY47_08440 PF00905 Penicillin binding protein transpeptidase domain ATY47_08440 PF00912 Transglycosylase ATY47_08450 PF04851 Type III restriction enzyme, res subunit ATY47_08450 PF13307 Helicase C-terminal domain ATY47_08455 PF00814 Glycoprotease family ATY47_08460 PF03747 ADP-ribosylglycohydrolase ATY47_08470 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ATY47_08470 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ATY47_08475 PF00072 Response regulator receiver domain ATY47_08480 PF00072 Response regulator receiver domain ATY47_08485 PF01584 CheW-like domain ATY47_08490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY47_08490 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ATY47_08495 PF01627 Hpt domain ATY47_08495 PF01584 CheW-like domain ATY47_08495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_08495 PF00072 Response regulator receiver domain ATY47_08510 PF13302 Acetyltransferase (GNAT) domain ATY47_08525 PF12450 von Willebrand factor ATY47_08525 PF00092 von Willebrand factor type A domain ATY47_08525 PF12034 Domain of unknown function (DUF3520) ATY47_08540 PF01112 Asparaginase ATY47_08545 PF03932 CutC family ATY47_08590 PF01301 Glycosyl hydrolases family 35 ATY47_08595 PF17678 Glycosyl hydrolase family 92 N-terminal domain ATY47_08595 PF07971 Glycosyl hydrolase family 92 ATY47_08645 PF00664 ABC transporter transmembrane region ATY47_08645 PF03412 Peptidase C39 family ATY47_08645 PF00005 ABC transporter ATY47_08650 PF07691 PA14 domain ATY47_08650 PF00933 Glycosyl hydrolase family 3 N terminal domain ATY47_08650 PF01915 Glycosyl hydrolase family 3 C-terminal domain ATY47_08650 PF14310 Fibronectin type III-like domain ATY47_08660 PF02838 Glycosyl hydrolase family 20, domain 2 ATY47_08660 PF00728 Glycosyl hydrolase family 20, catalytic domain ATY47_08660 PF07691 PA14 domain ATY47_08665 PF01476 LysM domain ATY47_08665 PF00704 Glycosyl hydrolases family 18 ATY47_08680 PF02685 Glucokinase ATY47_08685 PF04452 RNA methyltransferase ATY47_08690 PF00202 Aminotransferase class-III ATY47_08695 PF00293 NUDIX domain ATY47_08700 PF00459 Inositol monophosphatase family ATY47_08705 PF03819 MazG nucleotide pyrophosphohydrolase domain ATY47_08715 PF16200 C-terminal region of band_7 ATY47_08715 PF01145 SPFH domain / Band 7 family ATY47_08725 PF01571 Aminomethyltransferase folate-binding domain ATY47_08725 PF08669 Glycine cleavage T-protein C-terminal barrel domain ATY47_08730 PF01597 Glycine cleavage H-protein ATY47_08755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATY47_08755 PF09317 Domain of unknown function (DUF1974) ATY47_08755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATY47_08760 PF00561 alpha/beta hydrolase fold ATY47_08765 PF00440 Bacterial regulatory proteins, tetR family ATY47_08770 PF07715 TonB-dependent Receptor Plug Domain ATY47_08770 PF00593 TonB dependent receptor ATY47_08780 PF01430 Hsp33 protein ATY47_08785 PF00912 Transglycosylase ATY47_08790 PF00535 Glycosyl transferase family 2 ATY47_08795 PF00478 IMP dehydrogenase / GMP reductase domain ATY47_08795 PF00571 CBS domain ATY47_08805 PF03006 Haemolysin-III related ATY47_08810 PF16658 Class II release factor RF3, C-terminal domain ATY47_08810 PF00009 Elongation factor Tu GTP binding domain ATY47_08815 PF08525 Opacity-associated protein A N-terminal motif ATY47_08815 PF01476 LysM domain ATY47_08815 PF01551 Peptidase family M23 ATY47_08820 PF00561 alpha/beta hydrolase fold ATY47_08825 PF01053 Cys/Met metabolism PLP-dependent enzyme ATY47_08835 PF03315 Serine dehydratase beta chain ATY47_08835 PF03313 Serine dehydratase alpha chain ATY47_08845 PF04264 YceI-like domain ATY47_08855 PF04264 YceI-like domain ATY47_08860 PF00512 His Kinase A (phospho-acceptor) domain ATY47_08860 PF00072 Response regulator receiver domain ATY47_08860 PF01627 Hpt domain ATY47_08860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_08860 PF17149 Periplasmic sensor domain found in signal transduction proteins ATY47_08860 PF00672 HAMP domain ATY47_08865 PF00672 HAMP domain ATY47_08865 PF17149 Periplasmic sensor domain found in signal transduction proteins ATY47_08865 PF00512 His Kinase A (phospho-acceptor) domain ATY47_08865 PF01627 Hpt domain ATY47_08865 PF00072 Response regulator receiver domain ATY47_08865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_08870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_08870 PF17149 Periplasmic sensor domain found in signal transduction proteins ATY47_08870 PF00072 Response regulator receiver domain ATY47_08870 PF00672 HAMP domain ATY47_08870 PF01627 Hpt domain ATY47_08870 PF00512 His Kinase A (phospho-acceptor) domain ATY47_08905 PF07745 Glycosyl hydrolase family 53 ATY47_08920 PF09856 Predicted transcriptional regulator (DUF2083) ATY47_08920 PF06114 IrrE N-terminal-like domain ATY47_08920 PF01381 Helix-turn-helix ATY47_08925 PF00171 Aldehyde dehydrogenase family ATY47_08930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATY47_08930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATY47_08930 PF02770 Acyl-CoA dehydrogenase, middle domain ATY47_08935 PF00378 Enoyl-CoA hydratase/isomerase ATY47_08940 PF00378 Enoyl-CoA hydratase/isomerase ATY47_08940 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ATY47_08940 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ATY47_08945 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ATY47_08945 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ATY47_08950 PF01545 Cation efflux family ATY47_08955 PF00378 Enoyl-CoA hydratase/isomerase ATY47_08955 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ATY47_08955 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ATY47_08960 PF08281 Sigma-70, region 4 ATY47_08960 PF04542 Sigma-70 region 2 ATY47_08970 PF13180 PDZ domain ATY47_08975 PF00009 Elongation factor Tu GTP binding domain ATY47_08975 PF03144 Elongation factor Tu domain 2 ATY47_08975 PF00679 Elongation factor G C-terminus ATY47_08975 PF06421 GTP-binding protein LepA C-terminus ATY47_08980 PF10502 Signal peptidase, peptidase S26 ATY47_08990 PF00035 Double-stranded RNA binding motif ATY47_08990 PF14622 Ribonuclease-III-like ATY47_08995 PF07650 KH domain ATY47_08995 PF01926 50S ribosome-binding GTPase ATY47_09000 PF02565 Recombination protein O C terminal ATY47_09000 PF11967 Recombination protein O N terminal ATY47_09010 PF05958 tRNA (Uracil-5-)-methyltransferase ATY47_09025 PF05598 Transposase domain (DUF772) ATY47_09030 PF01323 DSBA-like thioredoxin domain ATY47_09035 PF01593 Flavin containing amine oxidoreductase ATY47_09040 PF04244 Deoxyribodipyrimidine photo-lyase-related protein ATY47_09045 PF00933 Glycosyl hydrolase family 3 N terminal domain ATY47_09055 PF01048 Phosphorylase superfamily ATY47_09060 PF00313 'Cold-shock' DNA-binding domain ATY47_09065 PF01494 FAD binding domain ATY47_09075 PF01494 FAD binding domain ATY47_09085 PF00270 DEAD/DEAH box helicase ATY47_09085 PF08494 DEAD/H associated ATY47_09085 PF00271 Helicase conserved C-terminal domain ATY47_09090 PF04675 DNA ligase N terminus ATY47_09090 PF04679 ATP dependent DNA ligase C terminal region ATY47_09090 PF01068 ATP dependent DNA ligase domain ATY47_09100 PF04675 DNA ligase N terminus ATY47_09100 PF04679 ATP dependent DNA ligase C terminal region ATY47_09100 PF01068 ATP dependent DNA ligase domain ATY47_09115 PF00072 Response regulator receiver domain ATY47_09115 PF00990 Diguanylate cyclase, GGDEF domain ATY47_09130 PF02803 Thiolase, C-terminal domain ATY47_09130 PF00108 Thiolase, N-terminal domain ATY47_09135 PF00082 Subtilase family ATY47_09135 PF12951 Passenger-associated-transport-repeat ATY47_09135 PF03797 Autotransporter beta-domain ATY47_09140 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ATY47_09140 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ATY47_09145 PF01863 Protein of unknown function DUF45 ATY47_09155 PF01258 Prokaryotic dksA/traR C4-type zinc finger ATY47_09180 PF01609 Transposase DDE domain ATY47_09180 PF05598 Transposase domain (DUF772) ATY47_09190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATY47_09205 PF03831 PhnA domain ATY47_09205 PF08274 PhnA Zinc-Ribbon ATY47_09215 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ATY47_09220 PF07690 Major Facilitator Superfamily ATY47_09270 PF03706 Lysylphosphatidylglycerol synthase TM region ATY47_09270 PF09924 Uncharacterised conserved protein (DUF2156) ATY47_09285 PF01042 Endoribonuclease L-PSP ATY47_09330 PF04542 Sigma-70 region 2 ATY47_09330 PF04545 Sigma-70, region 4 ATY47_09350 PF04060 Putative Fe-S cluster ATY47_09360 PF09334 tRNA synthetases class I (M) ATY47_09360 PF01588 Putative tRNA binding domain ATY47_09380 PF00324 Amino acid permease ATY47_09385 PF02574 Homocysteine S-methyltransferase ATY47_09395 PF02592 Putative vitamin uptake transporter ATY47_09410 PF05598 Transposase domain (DUF772) ATY47_09485 PF00005 ABC transporter ATY47_09485 PF13732 Domain of unknown function (DUF4162) ATY47_09490 PF00593 TonB dependent receptor ATY47_09490 PF07715 TonB-dependent Receptor Plug Domain ATY47_09500 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ATY47_09505 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ATY47_09505 PF14579 Helix-hairpin-helix motif ATY47_09505 PF02811 PHP domain ATY47_09505 PF01336 OB-fold nucleic acid binding domain ATY47_09505 PF07733 Bacterial DNA polymerase III alpha NTPase domain ATY47_09510 PF01351 Ribonuclease HII ATY47_09515 PF02684 Lipid-A-disaccharide synthetase ATY47_09520 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ATY47_09520 PF00132 Bacterial transferase hexapeptide (six repeats) ATY47_09525 PF07977 FabA-like domain ATY47_09530 PF00132 Bacterial transferase hexapeptide (six repeats) ATY47_09530 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ATY47_09535 PF01103 Surface antigen ATY47_09535 PF07244 Surface antigen variable number repeat ATY47_09540 PF02163 Peptidase family M50 ATY47_09540 PF17820 PDZ domain ATY47_09545 PF13288 DXP reductoisomerase C-terminal domain ATY47_09545 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ATY47_09545 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ATY47_09555 PF01255 Putative undecaprenyl diphosphate synthase ATY47_09560 PF01765 Ribosome recycling factor ATY47_09565 PF00696 Amino acid kinase family ATY47_09575 PF00889 Elongation factor TS ATY47_09580 PF00318 Ribosomal protein S2 ATY47_09615 PF00557 Metallopeptidase family M24 ATY47_09620 PF01909 Nucleotidyltransferase domain ATY47_09620 PF08335 GlnD PII-uridylyltransferase ATY47_09620 PF01966 HD domain ATY47_09625 PF14602 Hexapeptide repeat of succinyl-transferase ATY47_09625 PF00132 Bacterial transferase hexapeptide (six repeats) ATY47_09625 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ATY47_09635 PF03960 ArsC family ATY47_09645 PF07687 Peptidase dimerisation domain ATY47_09645 PF01546 Peptidase family M20/M25/M40 ATY47_09650 PF00733 Asparagine synthase ATY47_09650 PF13537 Glutamine amidotransferase domain ATY47_09665 PF07715 TonB-dependent Receptor Plug Domain ATY47_09665 PF00593 TonB dependent receptor ATY47_09670 PF01804 Penicillin amidase ATY47_09675 PF00210 Ferritin-like domain ATY47_09680 PF03989 DNA gyrase C-terminal domain, beta-propeller ATY47_09680 PF00521 DNA gyrase/topoisomerase IV, subunit A ATY47_09695 PF02321 Outer membrane efflux protein ATY47_09700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ATY47_09700 PF00529 HlyD membrane-fusion protein of T1SS ATY47_09705 PF07690 Major Facilitator Superfamily ATY47_09740 PF00665 Integrase core domain ATY47_09740 PF13936 Helix-turn-helix domain ATY47_09760 PF02780 Transketolase, C-terminal domain ATY47_09760 PF02779 Transketolase, pyrimidine binding domain ATY47_09760 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ATY47_09770 PF02770 Acyl-CoA dehydrogenase, middle domain ATY47_09770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATY47_09770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATY47_09770 PF12806 Acetyl-CoA dehydrogenase C-terminal like ATY47_09790 PF01668 SmpB protein ATY47_09795 PF03364 Polyketide cyclase / dehydrase and lipid transport ATY47_09800 PF03658 RnfH family Ubiquitin ATY47_09805 PF04355 SmpA / OmlA family ATY47_09810 PF01475 Ferric uptake regulator family ATY47_09815 PF02463 RecF/RecN/SMC N terminal domain ATY47_09820 PF01628 HrcA protein C terminal domain ATY47_09820 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding ATY47_09825 PF01025 GrpE ATY47_09830 PF00012 Hsp70 protein ATY47_09835 PF00226 DnaJ domain ATY47_09835 PF01556 DnaJ C terminal domain ATY47_09835 PF00684 DnaJ central domain ATY47_09840 PF08543 Phosphomethylpyrimidine kinase ATY47_09845 PF01817 Chorismate mutase type II ATY47_09845 PF02153 Prephenate dehydrogenase ATY47_09860 PF03466 LysR substrate binding domain ATY47_09860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY47_09865 PF00005 ABC transporter ATY47_09865 PF00664 ABC transporter transmembrane region ATY47_09870 PF01205 Uncharacterized protein family UPF0029 ATY47_09875 PF03641 Possible lysine decarboxylase ATY47_09880 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY47_09880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ATY47_09885 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ATY47_09885 PF00364 Biotin-requiring enzyme ATY47_09885 PF02817 e3 binding domain ATY47_09890 PF16870 2-oxoglutarate dehydrogenase C-terminal ATY47_09890 PF00676 Dehydrogenase E1 component ATY47_09890 PF16078 2-oxoglutarate dehydrogenase N-terminus ATY47_09890 PF02779 Transketolase, pyrimidine binding domain ATY47_09900 PF08007 Cupin superfamily protein ATY47_09915 PF00206 Lyase ATY47_09915 PF08328 Adenylosuccinate lyase C-terminal ATY47_09935 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_09945 PF13936 Helix-turn-helix domain ATY47_09945 PF00665 Integrase core domain ATY47_09955 PF00206 Lyase ATY47_09955 PF10415 Fumarase C C-terminus ATY47_09985 PF00005 ABC transporter ATY47_09990 PF00392 Bacterial regulatory proteins, gntR family ATY47_09995 PF00255 Glutathione peroxidase ATY47_10000 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ATY47_10000 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATY47_10005 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ATY47_10005 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ATY47_10005 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ATY47_10010 PF04102 SlyX ATY47_10030 PF07690 Major Facilitator Superfamily ATY47_10035 PF00294 pfkB family carbohydrate kinase ATY47_10045 PF02607 B12 binding domain ATY47_10045 PF02574 Homocysteine S-methyltransferase ATY47_10045 PF02965 Vitamin B12 dependent methionine synthase, activation domain ATY47_10045 PF00809 Pterin binding enzyme ATY47_10045 PF02310 B12 binding domain ATY47_10050 PF00809 Pterin binding enzyme ATY47_10050 PF02574 Homocysteine S-methyltransferase ATY47_10055 PF01209 ubiE/COQ5 methyltransferase family ATY47_10060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATY47_10060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATY47_10060 PF02770 Acyl-CoA dehydrogenase, middle domain ATY47_10080 PF00575 S1 RNA binding domain ATY47_10080 PF17876 Cold shock domain ATY47_10080 PF08461 Ribonuclease R winged-helix domain ATY47_10080 PF08206 Ribonuclease B OB domain ATY47_10080 PF00773 RNB domain ATY47_10100 PF08032 RNA 2'-O ribose methyltransferase substrate binding ATY47_10100 PF00588 SpoU rRNA Methylase family ATY47_10110 PF01609 Transposase DDE domain ATY47_10110 PF05598 Transposase domain (DUF772) ATY47_10125 PF00872 Transposase, Mutator family ATY47_10135 PF00313 'Cold-shock' DNA-binding domain ATY47_10140 PF00561 alpha/beta hydrolase fold ATY47_10150 PF01609 Transposase DDE domain ATY47_10150 PF05598 Transposase domain (DUF772) ATY47_10155 PF01609 Transposase DDE domain ATY47_10155 PF05598 Transposase domain (DUF772) ATY47_10200 PF01609 Transposase DDE domain ATY47_10200 PF05598 Transposase domain (DUF772) ATY47_10210 PF05598 Transposase domain (DUF772) ATY47_10215 PF13683 Integrase core domain ATY47_10215 PF13276 HTH-like domain ATY47_10220 PF01527 Transposase ATY47_10230 PF03544 Gram-negative bacterial TonB protein C-terminal ATY47_10235 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ATY47_10235 PF02403 Seryl-tRNA synthetase N-terminal domain ATY47_10250 PF01609 Transposase DDE domain ATY47_10250 PF05598 Transposase domain (DUF772) ATY47_10255 PF02525 Flavodoxin-like fold ATY47_10260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY47_10260 PF03466 LysR substrate binding domain ATY47_10290 PF03377 TAL effector repeat ATY47_10310 PF03377 TAL effector repeat ATY47_10335 PF03079 ARD/ARD' family ATY47_10340 PF00596 Class II Aldolase and Adducin N-terminal domain ATY47_10345 PF13520 Amino acid permease ATY47_10350 PF13520 Amino acid permease ATY47_10360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATY47_10360 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ATY47_10365 PF01565 FAD binding domain ATY47_10365 PF02913 FAD linked oxidases, C-terminal domain ATY47_10390 PF03918 Cytochrome C biogenesis protein ATY47_10395 PF08534 Redoxin ATY47_10400 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ATY47_10400 PF01578 Cytochrome C assembly protein ATY47_10405 PF03100 CcmE ATY47_10415 PF01578 Cytochrome C assembly protein ATY47_10420 PF03379 CcmB protein ATY47_10425 PF00005 ABC transporter ATY47_10430 PF00155 Aminotransferase class I and II ATY47_10435 PF00795 Carbon-nitrogen hydrolase ATY47_10455 PF01479 S4 domain ATY47_10455 PF00849 RNA pseudouridylate synthase ATY47_10460 PF04079 Segregation and condensation complex subunit ScpB ATY47_10465 PF02616 Segregation and condensation protein ScpA ATY47_10470 PF03795 YCII-related domain ATY47_10480 PF00356 Bacterial regulatory proteins, lacI family ATY47_10500 PF00528 Binding-protein-dependent transport system inner membrane component ATY47_10505 PF00528 Binding-protein-dependent transport system inner membrane component ATY47_10525 PF00795 Carbon-nitrogen hydrolase ATY47_10530 PF04371 Porphyromonas-type peptidyl-arginine deiminase ATY47_10540 PF00444 Ribosomal protein L36 ATY47_10545 PF02224 Cytidylate kinase ATY47_10550 PF00575 S1 RNA binding domain ATY47_10555 PF00216 Bacterial DNA-binding protein ATY47_10565 PF18073 Rubredoxin metal binding domain ATY47_10570 PF00953 Glycosyl transferase family 4 ATY47_10575 PF02719 Polysaccharide biosynthesis protein ATY47_10580 PF00483 Nucleotidyl transferase ATY47_10585 PF00999 Sodium/hydrogen exchanger family ATY47_10585 PF02254 TrkA-N domain ATY47_10620 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ATY47_10620 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ATY47_10625 PF00571 CBS domain ATY47_10625 PF00478 IMP dehydrogenase / GMP reductase domain ATY47_10630 PF00958 GMP synthase C terminal domain ATY47_10630 PF00117 Glutamine amidotransferase class-I ATY47_10630 PF02540 NAD synthase ATY47_10635 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) ATY47_10640 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ATY47_10640 PF00361 Proton-conducting membrane transporter ATY47_10640 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus ATY47_10645 PF03466 LysR substrate binding domain ATY47_10645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY47_10660 PF03601 Conserved hypothetical protein 698 ATY47_10665 PF03466 LysR substrate binding domain ATY47_10665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY47_10680 PF01566 Natural resistance-associated macrophage protein ATY47_10685 PF02742 Iron dependent repressor, metal binding and dimerisation domain ATY47_10685 PF01325 Iron dependent repressor, N-terminal DNA binding domain ATY47_10690 PF14437 MafB19-like deaminase ATY47_10695 PF00929 Exonuclease ATY47_10700 PF05552 Conserved TM helix ATY47_10700 PF00924 Mechanosensitive ion channel ATY47_10705 PF00391 PEP-utilising enzyme, mobile domain ATY47_10705 PF02896 PEP-utilising enzyme, TIM barrel domain ATY47_10705 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ATY47_10710 PF03618 Kinase/pyrophosphorylase ATY47_10745 PF01066 CDP-alcohol phosphatidyltransferase ATY47_10755 PF00561 alpha/beta hydrolase fold ATY47_10770 PF01266 FAD dependent oxidoreductase ATY47_10770 PF00355 Rieske [2Fe-2S] domain ATY47_10780 PF09371 Tex-like protein N-terminal domain ATY47_10780 PF00575 S1 RNA binding domain ATY47_10780 PF16921 Tex protein YqgF-like domain ATY47_10780 PF17674 HHH domain ATY47_10790 PF00072 Response regulator receiver domain ATY47_10800 PF04551 GcpE protein ATY47_10805 PF01569 PAP2 superfamily ATY47_10815 PF07690 Major Facilitator Superfamily ATY47_10825 PF01177 Asp/Glu/Hydantoin racemase ATY47_10830 PF00892 EamA-like transporter family ATY47_10835 PF01565 FAD binding domain ATY47_10835 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ATY47_10840 PF01180 Dihydroorotate dehydrogenase ATY47_10855 PF00171 Aldehyde dehydrogenase family ATY47_10865 PF03073 TspO/MBR family ATY47_10870 PF01842 ACT domain ATY47_10870 PF00696 Amino acid kinase family ATY47_10870 PF03447 Homoserine dehydrogenase, NAD binding domain ATY47_10870 PF00742 Homoserine dehydrogenase ATY47_10870 PF13840 ACT domain ATY47_10875 PF00288 GHMP kinases N terminal domain ATY47_10875 PF08544 GHMP kinases C terminal ATY47_10890 PF00291 Pyridoxal-phosphate dependent enzyme ATY47_10890 PF14821 Threonine synthase N terminus ATY47_10905 PF03129 Anticodon binding domain ATY47_10905 PF13393 Histidyl-tRNA synthetase ATY47_10920 PF01634 ATP phosphoribosyltransferase ATY47_10920 PF08029 HisG, C-terminal domain ATY47_10925 PF00815 Histidinol dehydrogenase ATY47_10930 PF00155 Aminotransferase class I and II ATY47_10935 PF00475 Imidazoleglycerol-phosphate dehydratase ATY47_10940 PF00117 Glutamine amidotransferase class-I ATY47_10945 PF00977 Histidine biosynthesis protein ATY47_10950 PF00977 Histidine biosynthesis protein ATY47_10955 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ATY47_10955 PF01502 Phosphoribosyl-AMP cyclohydrolase ATY47_10980 PF03377 TAL effector repeat ATY47_11075 PF02303 Helix-destabilising protein ATY47_11105 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_11115 PF05598 Transposase domain (DUF772) ATY47_11115 PF01609 Transposase DDE domain ATY47_11130 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_11140 PF03377 TAL effector repeat ATY47_11160 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_11210 PF05598 Transposase domain (DUF772) ATY47_11210 PF01609 Transposase DDE domain ATY47_11225 PF00872 Transposase, Mutator family ATY47_11235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ATY47_11255 PF01066 CDP-alcohol phosphatidyltransferase ATY47_11260 PF08459 UvrC Helix-hairpin-helix N-terminal ATY47_11260 PF01541 GIY-YIG catalytic domain ATY47_11260 PF02151 UvrB/uvrC motif ATY47_11270 PF01451 Low molecular weight phosphotyrosine protein phosphatase ATY47_11275 PF02348 Cytidylyltransferase ATY47_11280 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ATY47_11285 PF00005 ABC transporter ATY47_11285 PF00664 ABC transporter transmembrane region ATY47_11295 PF01618 MotA/TolQ/ExbB proton channel family ATY47_11300 PF00753 Metallo-beta-lactamase superfamily ATY47_11300 PF03772 Competence protein ATY47_11315 PF00005 ABC transporter ATY47_11320 PF02687 FtsX-like permease family ATY47_11320 PF12704 MacB-like periplasmic core domain ATY47_11330 PF03937 Flavinator of succinate dehydrogenase ATY47_11335 PF13085 2Fe-2S iron-sulfur cluster binding domain ATY47_11345 PF00890 FAD binding domain ATY47_11345 PF02910 Fumarate reductase flavoprotein C-term ATY47_11350 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ATY47_11355 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ATY47_11360 PF01571 Aminomethyltransferase folate-binding domain ATY47_11365 PF00005 ABC transporter ATY47_11365 PF17912 MalK OB fold domain ATY47_11370 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ATY47_11370 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ATY47_11375 PF02685 Glucokinase ATY47_11380 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ATY47_11385 PF00920 Dehydratase family ATY47_11390 PF01081 KDPG and KHG aldolase ATY47_11395 PF05598 Transposase domain (DUF772) ATY47_11425 PF01627 Hpt domain ATY47_11425 PF00672 HAMP domain ATY47_11425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_11425 PF00512 His Kinase A (phospho-acceptor) domain ATY47_11425 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ATY47_11425 PF00072 Response regulator receiver domain ATY47_11435 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_11455 PF08448 PAS fold ATY47_11455 PF00990 Diguanylate cyclase, GGDEF domain ATY47_11485 PF02253 Phospholipase A1 ATY47_11495 PF05681 Fumarate hydratase (Fumerase) ATY47_11495 PF05683 Fumarase C-terminus ATY47_11500 PF00005 ABC transporter ATY47_11505 PF00970 Oxidoreductase FAD-binding domain ATY47_11505 PF00175 Oxidoreductase NAD-binding domain ATY47_11510 PF00255 Glutathione peroxidase ATY47_11530 PF00082 Subtilase family ATY47_11535 PF08281 Sigma-70, region 4 ATY47_11535 PF04542 Sigma-70 region 2 ATY47_11545 PF12802 MarR family ATY47_11570 PF00854 POT family ATY47_11580 PF00933 Glycosyl hydrolase family 3 N terminal domain ATY47_11580 PF01915 Glycosyl hydrolase family 3 C-terminal domain ATY47_11580 PF14310 Fibronectin type III-like domain ATY47_11595 PF01590 GAF domain ATY47_11595 PF00563 EAL domain ATY47_11595 PF00360 Phytochrome region ATY47_11595 PF00990 Diguanylate cyclase, GGDEF domain ATY47_11600 PF00474 Sodium:solute symporter family ATY47_11605 PF14310 Fibronectin type III-like domain ATY47_11605 PF00933 Glycosyl hydrolase family 3 N terminal domain ATY47_11605 PF01915 Glycosyl hydrolase family 3 C-terminal domain ATY47_11625 PF00342 Phosphoglucose isomerase ATY47_11630 PF02261 Aspartate decarboxylase ATY47_11635 PF02569 Pantoate-beta-alanine ligase ATY47_11640 PF02548 Ketopantoate hydroxymethyltransferase ATY47_11645 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ATY47_11650 PF12627 Probable RNA and SrmB- binding site of polymerase A ATY47_11650 PF12626 Polymerase A arginine-rich C-terminus ATY47_11650 PF01743 Poly A polymerase head domain ATY47_11660 PF02649 Type I GTP cyclohydrolase folE2 ATY47_11665 PF01520 N-acetylmuramoyl-L-alanine amidase ATY47_11680 PF01527 Transposase ATY47_11690 PF05598 Transposase domain (DUF772) ATY47_11695 PF00082 Subtilase family ATY47_11695 PF03797 Autotransporter beta-domain ATY47_11700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ATY47_11705 PF00873 AcrB/AcrD/AcrF family ATY47_11710 PF02321 Outer membrane efflux protein ATY47_11715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_11715 PF13426 PAS domain ATY47_11715 PF08448 PAS fold ATY47_11715 PF00512 His Kinase A (phospho-acceptor) domain ATY47_11715 PF00072 Response regulator receiver domain ATY47_11720 PF00196 Bacterial regulatory proteins, luxR family ATY47_11720 PF00072 Response regulator receiver domain ATY47_11725 PF12951 Passenger-associated-transport-repeat ATY47_11730 PF01527 Transposase ATY47_11740 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ATY47_11745 PF00800 Prephenate dehydratase ATY47_11745 PF01817 Chorismate mutase type II ATY47_11745 PF01842 ACT domain ATY47_11750 PF00266 Aminotransferase class-V ATY47_11755 PF00174 Oxidoreductase molybdopterin binding domain ATY47_11760 PF01794 Ferric reductase like transmembrane component ATY47_11785 PF07702 UTRA domain ATY47_11785 PF00392 Bacterial regulatory proteins, gntR family ATY47_11795 PF07969 Amidohydrolase family ATY47_11800 PF00221 Aromatic amino acid lyase ATY47_11810 PF17392 Urocanase C-terminal domain ATY47_11810 PF01175 Urocanase Rossmann-like domain ATY47_11810 PF17391 Urocanase N-terminal domain ATY47_11825 PF13276 HTH-like domain ATY47_11830 PF01527 Transposase ATY47_11835 PF00521 DNA gyrase/topoisomerase IV, subunit A ATY47_11835 PF03989 DNA gyrase C-terminal domain, beta-propeller ATY47_11840 PF01008 Initiation factor 2 subunit family ATY47_11850 PF00152 tRNA synthetases class II (D, K and N) ATY47_11855 PF12826 Helix-hairpin-helix motif ATY47_11855 PF03120 NAD-dependent DNA ligase OB-fold domain ATY47_11855 PF01653 NAD-dependent DNA ligase adenylation domain ATY47_11855 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ATY47_11855 PF00533 BRCA1 C Terminus (BRCT) domain ATY47_11865 PF04354 ZipA, C-terminal FtsZ-binding domain ATY47_11870 PF02463 RecF/RecN/SMC N terminal domain ATY47_11875 PF03948 Ribosomal protein L9, C-terminal domain ATY47_11875 PF01281 Ribosomal protein L9, N-terminal domain ATY47_11880 PF01084 Ribosomal protein S18 ATY47_11885 PF01250 Ribosomal protein S6 ATY47_11890 PF01521 Iron-sulphur cluster biosynthesis ATY47_11895 PF00152 tRNA synthetases class II (D, K and N) ATY47_11895 PF01336 OB-fold nucleic acid binding domain ATY47_11925 PF00484 Carbonic anhydrase ATY47_11930 PF06052 3-hydroxyanthranilic acid dioxygenase ATY47_11940 PF00266 Aminotransferase class-V ATY47_11945 PF01494 FAD binding domain ATY47_11950 PF00929 Exonuclease ATY47_11950 PF08411 Exonuclease C-terminal ATY47_11960 PF00248 Aldo/keto reductase family ATY47_11975 PF01513 ATP-NAD kinase ATY47_11980 PF01170 Putative RNA methylase family UPF0020 ATY47_11980 PF10672 S-adenosylmethionine-dependent methyltransferase ATY47_11980 PF02926 THUMP domain ATY47_11985 PF12848 ABC transporter ATY47_11985 PF00005 ABC transporter ATY47_11990 PF00005 ABC transporter ATY47_11995 PF00005 ABC transporter ATY47_12025 PF00581 Rhodanese-like domain ATY47_12030 PF00293 NUDIX domain ATY47_12035 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ATY47_12035 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATY47_12040 PF00378 Enoyl-CoA hydratase/isomerase ATY47_12050 PF10576 Iron-sulfur binding domain of endonuclease III ATY47_12050 PF00730 HhH-GPD superfamily base excision DNA repair protein ATY47_12050 PF00633 Helix-hairpin-helix motif ATY47_12060 PF00484 Carbonic anhydrase ATY47_12065 PF05598 Transposase domain (DUF772) ATY47_12065 PF01609 Transposase DDE domain ATY47_12080 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_12095 PF12849 PBP superfamily domain ATY47_12100 PF12849 PBP superfamily domain ATY47_12105 PF00528 Binding-protein-dependent transport system inner membrane component ATY47_12110 PF00528 Binding-protein-dependent transport system inner membrane component ATY47_12115 PF00005 ABC transporter ATY47_12120 PF01895 PhoU domain ATY47_12130 PF00929 Exonuclease ATY47_12145 PF00872 Transposase, Mutator family ATY47_12170 PF13495 Phage integrase, N-terminal SAM-like domain ATY47_12170 PF00589 Phage integrase family ATY47_12175 PF02355 Protein export membrane protein ATY47_12175 PF07549 SecD/SecF GG Motif ATY47_12180 PF02355 Protein export membrane protein ATY47_12180 PF13721 SecD export protein N-terminal TM region ATY47_12180 PF07549 SecD/SecF GG Motif ATY47_12185 PF02699 Preprotein translocase subunit ATY47_12190 PF01702 Queuine tRNA-ribosyltransferase ATY47_12195 PF02547 Queuosine biosynthesis protein ATY47_12230 PF05598 Transposase domain (DUF772) ATY47_12260 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_12280 PF00037 4Fe-4S binding domain ATY47_12295 PF01467 Cytidylyltransferase-like ATY47_12305 PF00183 Hsp90 protein ATY47_12305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_12325 PF00899 ThiF family ATY47_12340 PF05598 Transposase domain (DUF772) ATY47_12360 PF00665 Integrase core domain ATY47_12360 PF13936 Helix-turn-helix domain ATY47_12365 PF05598 Transposase domain (DUF772) ATY47_12365 PF01609 Transposase DDE domain ATY47_12395 PF00994 Probable molybdopterin binding domain ATY47_12395 PF03454 MoeA C-terminal region (domain IV) ATY47_12395 PF03453 MoeA N-terminal region (domain I and II) ATY47_12400 PF01926 50S ribosome-binding GTPase ATY47_12400 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ATY47_12405 PF01011 PQQ enzyme repeat ATY47_12405 PF13360 PQQ-like domain ATY47_12415 PF13464 Domain of unknown function (DUF4115) ATY47_12425 PF04055 Radical SAM superfamily ATY47_12430 PF00334 Nucleoside diphosphate kinase ATY47_12440 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ATY47_12440 PF00378 Enoyl-CoA hydratase/isomerase ATY47_12440 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ATY47_12445 PF00108 Thiolase, N-terminal domain ATY47_12445 PF02803 Thiolase, C-terminal domain ATY47_12450 PF00654 Voltage gated chloride channel ATY47_12460 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ATY47_12470 PF16193 AAA C-terminal domain ATY47_12470 PF00004 ATPase family associated with various cellular activities (AAA) ATY47_12470 PF12002 MgsA AAA+ ATPase C terminal ATY47_12480 PF03548 Outer membrane lipoprotein carrier protein LolA ATY47_12490 PF17854 FtsK alpha domain ATY47_12490 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ATY47_12490 PF09397 Ftsk gamma domain ATY47_12490 PF01580 FtsK/SpoIIIE family ATY47_12495 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY47_12515 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ATY47_12520 PF01176 Translation initiation factor 1A / IF-1 ATY47_12525 PF00004 ATPase family associated with various cellular activities (AAA) ATY47_12525 PF07724 AAA domain (Cdc48 subfamily) ATY47_12525 PF17871 AAA lid domain ATY47_12525 PF02861 Clp amino terminal domain, pathogenicity island component ATY47_12525 PF10431 C-terminal, D2-small domain, of ClpB protein ATY47_12530 PF02617 ATP-dependent Clp protease adaptor protein ClpS ATY47_12535 PF00293 NUDIX domain ATY47_12545 PF04356 Protein of unknown function (DUF489) ATY47_12550 PF12729 Four helix bundle sensory module for signal transduction ATY47_12550 PF00672 HAMP domain ATY47_12550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY47_12565 PF08448 PAS fold ATY47_12565 PF00563 EAL domain ATY47_12565 PF00990 Diguanylate cyclase, GGDEF domain ATY47_12565 PF08447 PAS fold ATY47_12570 PF07730 Histidine kinase ATY47_12570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_12575 PF03707 Bacterial signalling protein N terminal repeat ATY47_12575 PF00563 EAL domain ATY47_12575 PF00990 Diguanylate cyclase, GGDEF domain ATY47_12580 PF13188 PAS domain ATY47_12580 PF00989 PAS fold ATY47_12580 PF00512 His Kinase A (phospho-acceptor) domain ATY47_12580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_12580 PF13426 PAS domain ATY47_12600 PF00072 Response regulator receiver domain ATY47_12600 PF01584 CheW-like domain ATY47_12610 PF00460 Flagella basal body rod protein ATY47_12610 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATY47_12615 PF03963 Flagellar hook capping protein - N-terminal region ATY47_12620 PF07559 Flagellar basal body protein FlaE ATY47_12620 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATY47_12620 PF00460 Flagella basal body rod protein ATY47_12625 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATY47_12625 PF00460 Flagella basal body rod protein ATY47_12630 PF00460 Flagella basal body rod protein ATY47_12630 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATY47_12635 PF02107 Flagellar L-ring protein ATY47_12640 PF02119 Flagellar P-ring protein ATY47_12645 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ATY47_12645 PF10135 Rod binding protein ATY47_12650 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATY47_12650 PF07196 Flagellin hook IN motif ATY47_12660 PF00669 Bacterial flagellin N-terminal helical region ATY47_12660 PF00700 Bacterial flagellin C-terminal helical region ATY47_12665 PF07196 Flagellin hook IN motif ATY47_12665 PF02465 Flagellar hook-associated protein 2 N-terminus ATY47_12665 PF07195 Flagellar hook-associated protein 2 C-terminus ATY47_12670 PF02561 Flagellar protein FliS ATY47_12685 PF00196 Bacterial regulatory proteins, luxR family ATY47_12685 PF00072 Response regulator receiver domain ATY47_12690 PF00309 Sigma-54 factor, Activator interacting domain (AID) ATY47_12690 PF04963 Sigma-54 factor, core binding domain ATY47_12690 PF04552 Sigma-54, DNA binding domain ATY47_12695 PF00072 Response regulator receiver domain ATY47_12695 PF01339 CheB methylesterase ATY47_12700 PF00158 Sigma-54 interaction domain ATY47_12700 PF00072 Response regulator receiver domain ATY47_12700 PF02954 Bacterial regulatory protein, Fis family ATY47_12705 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ATY47_12715 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ATY47_12715 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ATY47_12750 PF00534 Glycosyl transferases group 1 ATY47_12750 PF00535 Glycosyl transferase family 2 ATY47_12755 PF02049 Flagellar hook-basal body complex protein FliE ATY47_12760 PF08345 Flagellar M-ring protein C-terminal ATY47_12760 PF01514 Secretory protein of YscJ/FliF family ATY47_12765 PF01706 FliG C-terminal domain ATY47_12765 PF14842 FliG N-terminal domain ATY47_12765 PF14841 FliG middle domain ATY47_12775 PF18269 T3SS EscN ATPase C-terminal domain ATY47_12775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATY47_12795 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ATY47_12795 PF02154 Flagellar motor switch protein FliM ATY47_12800 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ATY47_12805 PF04347 Flagellar biosynthesis protein, FliO ATY47_12810 PF00813 FliP family ATY47_12815 PF01313 Bacterial export proteins, family 3 ATY47_12820 PF01311 Bacterial export proteins, family 1 ATY47_12825 PF00563 EAL domain ATY47_12825 PF00990 Diguanylate cyclase, GGDEF domain ATY47_12825 PF03707 Bacterial signalling protein N terminal repeat ATY47_12825 PF13188 PAS domain ATY47_12830 PF13188 PAS domain ATY47_12830 PF00563 EAL domain ATY47_12830 PF00990 Diguanylate cyclase, GGDEF domain ATY47_12830 PF03707 Bacterial signalling protein N terminal repeat ATY47_12835 PF00563 EAL domain ATY47_12835 PF03707 Bacterial signalling protein N terminal repeat ATY47_12835 PF00990 Diguanylate cyclase, GGDEF domain ATY47_12840 PF01312 FlhB HrpN YscU SpaS Family ATY47_12845 PF00771 FHIPEP family ATY47_12850 PF00448 SRP54-type protein, GTPase domain ATY47_12855 PF10609 NUBPL iron-transfer P-loop NTPase ATY47_12860 PF04545 Sigma-70, region 4 ATY47_12860 PF04542 Sigma-70 region 2 ATY47_12860 PF04539 Sigma-70 region 3 ATY47_12865 PF00072 Response regulator receiver domain ATY47_12870 PF04344 Chemotaxis phosphatase, CheZ ATY47_12875 PF01584 CheW-like domain ATY47_12875 PF07194 P2 response regulator binding domain ATY47_12875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_12875 PF02895 Signal transducing histidine kinase, homodimeric domain ATY47_12875 PF01627 Hpt domain ATY47_12890 PF13936 Helix-turn-helix domain ATY47_12890 PF00665 Integrase core domain ATY47_12905 PF01609 Transposase DDE domain ATY47_12905 PF05598 Transposase domain (DUF772) ATY47_12910 PF05593 RHS Repeat ATY47_12910 PF03527 RHS protein ATY47_12920 PF01609 Transposase DDE domain ATY47_12920 PF05598 Transposase domain (DUF772) ATY47_12930 PF01609 Transposase DDE domain ATY47_12930 PF05598 Transposase domain (DUF772) ATY47_12955 PF00873 AcrB/AcrD/AcrF family ATY47_12975 PF00034 Cytochrome c ATY47_13025 PF01609 Transposase DDE domain ATY47_13025 PF05598 Transposase domain (DUF772) ATY47_13030 PF00664 ABC transporter transmembrane region ATY47_13030 PF00005 ABC transporter ATY47_13035 PF00005 ABC transporter ATY47_13035 PF00664 ABC transporter transmembrane region ATY47_13040 PF01654 Cytochrome bd terminal oxidase subunit I ATY47_13045 PF01654 Cytochrome bd terminal oxidase subunit I ATY47_13050 PF02322 Cytochrome bd terminal oxidase subunit II ATY47_13070 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ATY47_13070 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ATY47_13075 PF00171 Aldehyde dehydrogenase family ATY47_13080 PF00696 Amino acid kinase family ATY47_13080 PF01472 PUA domain ATY47_13095 PF00206 Lyase ATY47_13100 PF01118 Semialdehyde dehydrogenase, NAD binding domain ATY47_13110 PF00696 Amino acid kinase family ATY47_13110 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase ATY47_13115 PF01546 Peptidase family M20/M25/M40 ATY47_13115 PF07687 Peptidase dimerisation domain ATY47_13125 PF00764 Arginosuccinate synthase ATY47_13130 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ATY47_13130 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ATY47_13140 PF01406 tRNA synthetases class I (C) catalytic domain ATY47_13140 PF09190 DALR domain ATY47_13145 PF02657 Fe-S metabolism associated domain ATY47_13160 PF01258 Prokaryotic dksA/traR C4-type zinc finger ATY47_13170 PF01809 Putative membrane protein insertion efficiency factor ATY47_13175 PF01979 Amidohydrolase family ATY47_13180 PF08460 Bacterial SH3 domain ATY47_13180 PF01551 Peptidase family M23 ATY47_13185 PF05985 Ethanolamine ammonia-lyase light chain (EutC) ATY47_13190 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_13215 PF01609 Transposase DDE domain ATY47_13215 PF05598 Transposase domain (DUF772) ATY47_13225 PF01095 Pectinesterase ATY47_13245 PF00295 Glycosyl hydrolases family 28 ATY47_13255 PF13419 Haloacid dehalogenase-like hydrolase ATY47_13265 PF01979 Amidohydrolase family ATY47_13275 PF09285 Elongation factor P, C-terminal ATY47_13275 PF08207 Elongation factor P (EF-P) KOW-like domain ATY47_13275 PF01132 Elongation factor P (EF-P) OB domain ATY47_13280 PF04055 Radical SAM superfamily ATY47_13285 PF03707 Bacterial signalling protein N terminal repeat ATY47_13285 PF13188 PAS domain ATY47_13285 PF00990 Diguanylate cyclase, GGDEF domain ATY47_13285 PF00563 EAL domain ATY47_13295 PF00588 SpoU rRNA Methylase family ATY47_13300 PF00459 Inositol monophosphatase family ATY47_13305 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ATY47_13305 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ATY47_13310 PF00545 ribonuclease ATY47_13330 PF00271 Helicase conserved C-terminal domain ATY47_13330 PF00270 DEAD/DEAH box helicase ATY47_13330 PF03880 DbpA RNA binding domain ATY47_13335 PF00156 Phosphoribosyl transferase domain ATY47_13340 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ATY47_13350 PF14497 Glutathione S-transferase, C-terminal domain ATY47_13350 PF02798 Glutathione S-transferase, N-terminal domain ATY47_13355 PF00313 'Cold-shock' DNA-binding domain ATY47_13360 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ATY47_13365 PF07152 YaeQ protein ATY47_13375 PF00990 Diguanylate cyclase, GGDEF domain ATY47_13375 PF00072 Response regulator receiver domain ATY47_13375 PF00563 EAL domain ATY47_13380 PF01435 Peptidase family M48 ATY47_13385 PF00749 tRNA synthetases class I (E and Q), catalytic domain ATY47_13390 PF00106 short chain dehydrogenase ATY47_13395 PF05233 PHB accumulation regulatory domain ATY47_13395 PF07879 PHB/PHA accumulation regulator DNA-binding domain ATY47_13410 PF01119 DNA mismatch repair protein, C-terminal domain ATY47_13410 PF08676 MutL C terminal dimerisation domain ATY47_13415 PF11741 AMIN domain ATY47_13415 PF01520 N-acetylmuramoyl-L-alanine amidase ATY47_13420 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ATY47_13425 PF01256 Carbohydrate kinase ATY47_13425 PF03853 YjeF-related protein N-terminus ATY47_13430 PF08331 Domain of unknown function (DUF1730) ATY47_13440 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_13445 PF13742 OB-fold nucleic acid binding domain ATY47_13445 PF02601 Exonuclease VII, large subunit ATY47_13460 PF03781 Sulfatase-modifying factor enzyme 1 ATY47_13465 PF01612 3'-5' exonuclease ATY47_13465 PF00570 HRDC domain ATY47_13505 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ATY47_13505 PF14850 DNA-binding domain of Proline dehydrogenase ATY47_13505 PF01619 Proline dehydrogenase ATY47_13505 PF00171 Aldehyde dehydrogenase family ATY47_13510 PF00872 Transposase, Mutator family ATY47_13540 PF04386 Stringent starvation protein B ATY47_13545 PF00043 Glutathione S-transferase, C-terminal domain ATY47_13545 PF02798 Glutathione S-transferase, N-terminal domain ATY47_13550 PF02167 Cytochrome C1 family ATY47_13555 PF00033 Cytochrome b/b6/petB ATY47_13555 PF00032 Cytochrome b(C-terminal)/b6/petD ATY47_13560 PF00355 Rieske [2Fe-2S] domain ATY47_13560 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ATY47_13565 PF01464 Transglycosylase SLT domain ATY47_13585 PF01938 TRAM domain ATY47_13585 PF04055 Radical SAM superfamily ATY47_13585 PF00919 Uncharacterized protein family UPF0004 ATY47_13590 PF02562 PhoH-like protein ATY47_13600 PF02130 Uncharacterized protein family UPF0054 ATY47_13610 PF00571 CBS domain ATY47_13610 PF03471 Transporter associated domain ATY47_13625 PF00171 Aldehyde dehydrogenase family ATY47_13635 PF00528 Binding-protein-dependent transport system inner membrane component ATY47_13650 PF02321 Outer membrane efflux protein ATY47_13655 PF07690 Major Facilitator Superfamily ATY47_13660 PF13533 Biotin-lipoyl like ATY47_13670 PF00120 Glutamine synthetase, catalytic domain ATY47_13680 PF00120 Glutamine synthetase, catalytic domain ATY47_13685 PF01266 FAD dependent oxidoreductase ATY47_13690 PF00072 Response regulator receiver domain ATY47_13690 PF00990 Diguanylate cyclase, GGDEF domain ATY47_13695 PF07690 Major Facilitator Superfamily ATY47_13695 PF00083 Sugar (and other) transporter ATY47_13705 PF00384 Molybdopterin oxidoreductase ATY47_13710 PF02634 FdhD/NarQ family ATY47_13715 PF07690 Major Facilitator Superfamily ATY47_13725 PF00202 Aminotransferase class-III ATY47_13730 PF00005 ABC transporter ATY47_13740 PF04286 Protein of unknown function (DUF445) ATY47_13745 PF01627 Hpt domain ATY47_13745 PF00072 Response regulator receiver domain ATY47_13745 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ATY47_13745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_13745 PF00512 His Kinase A (phospho-acceptor) domain ATY47_13745 PF00672 HAMP domain ATY47_13750 PF00072 Response regulator receiver domain ATY47_13755 PF05598 Transposase domain (DUF772) ATY47_13755 PF01609 Transposase DDE domain ATY47_13760 PF05088 Bacterial NAD-glutamate dehydrogenase ATY47_13770 PF00529 HlyD membrane-fusion protein of T1SS ATY47_13770 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ATY47_13775 PF00873 AcrB/AcrD/AcrF family ATY47_13790 PF13006 Insertion element 4 transposase N-terminal ATY47_13790 PF01609 Transposase DDE domain ATY47_13795 PF00356 Bacterial regulatory proteins, lacI family ATY47_13800 PF05524 PEP-utilising enzyme, N-terminal ATY47_13800 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ATY47_13800 PF00391 PEP-utilising enzyme, mobile domain ATY47_13800 PF00381 PTS HPr component phosphorylation site ATY47_13800 PF02896 PEP-utilising enzyme, TIM barrel domain ATY47_13805 PF00294 pfkB family carbohydrate kinase ATY47_13810 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ATY47_13825 PF01609 Transposase DDE domain ATY47_13825 PF05598 Transposase domain (DUF772) ATY47_13890 PF16671 Actin cross-linking domain ATY47_13890 PF04717 Type VI secretion system, phage-baseplate injector ATY47_13900 PF13276 HTH-like domain ATY47_13900 PF00665 Integrase core domain ATY47_13900 PF13333 Integrase core domain ATY47_13910 PF16671 Actin cross-linking domain ATY47_13910 PF04717 Type VI secretion system, phage-baseplate injector ATY47_13950 PF07715 TonB-dependent Receptor Plug Domain ATY47_13950 PF00593 TonB dependent receptor ATY47_13960 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ATY47_13960 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ATY47_13980 PF01618 MotA/TolQ/ExbB proton channel family ATY47_13985 PF00691 OmpA family ATY47_13985 PF13677 Membrane MotB of proton-channel complex MotA/MotB ATY47_13990 PF13614 AAA domain ATY47_13995 PF01584 CheW-like domain ATY47_14005 PF00072 Response regulator receiver domain ATY47_14010 PF09078 CheY binding ATY47_14010 PF01584 CheW-like domain ATY47_14010 PF01627 Hpt domain ATY47_14010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_14010 PF02895 Signal transducing histidine kinase, homodimeric domain ATY47_14035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY47_14035 PF00672 HAMP domain ATY47_14035 PF02203 Tar ligand binding domain homologue ATY47_14045 PF00672 HAMP domain ATY47_14045 PF02203 Tar ligand binding domain homologue ATY47_14045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY47_14050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY47_14050 PF00672 HAMP domain ATY47_14050 PF02203 Tar ligand binding domain homologue ATY47_14055 PF00672 HAMP domain ATY47_14055 PF02203 Tar ligand binding domain homologue ATY47_14055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY47_14060 PF02203 Tar ligand binding domain homologue ATY47_14060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY47_14060 PF00672 HAMP domain ATY47_14065 PF02203 Tar ligand binding domain homologue ATY47_14065 PF00672 HAMP domain ATY47_14065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY47_14070 PF07238 PilZ domain ATY47_14070 PF07317 Flagellar regulator YcgR ATY47_14075 PF01584 CheW-like domain ATY47_14095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY47_14095 PF00672 HAMP domain ATY47_14095 PF02203 Tar ligand binding domain homologue ATY47_14100 PF03705 CheR methyltransferase, all-alpha domain ATY47_14100 PF01739 CheR methyltransferase, SAM binding domain ATY47_14105 PF03975 CheD chemotactic sensory transduction ATY47_14110 PF00072 Response regulator receiver domain ATY47_14110 PF01339 CheB methylesterase ATY47_14115 PF00990 Diguanylate cyclase, GGDEF domain ATY47_14115 PF00563 EAL domain ATY47_14115 PF03707 Bacterial signalling protein N terminal repeat ATY47_14120 PF00561 alpha/beta hydrolase fold ATY47_14125 PF11791 Aconitate B N-terminal domain ATY47_14125 PF06434 Aconitate hydratase 2 N-terminus ATY47_14125 PF00330 Aconitase family (aconitate hydratase) ATY47_14140 PF00694 Aconitase C-terminal domain ATY47_14140 PF00330 Aconitase family (aconitate hydratase) ATY47_14150 PF00501 AMP-binding enzyme ATY47_14150 PF13193 AMP-binding enzyme C-terminal domain ATY47_14155 PF00378 Enoyl-CoA hydratase/isomerase ATY47_14160 PF00072 Response regulator receiver domain ATY47_14160 PF01627 Hpt domain ATY47_14160 PF00512 His Kinase A (phospho-acceptor) domain ATY47_14160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_14170 PF00072 Response regulator receiver domain ATY47_14175 PF01336 OB-fold nucleic acid binding domain ATY47_14175 PF00152 tRNA synthetases class II (D, K and N) ATY47_14180 PF00472 RF-1 domain ATY47_14180 PF03462 PCRF domain ATY47_14195 PF01610 Transposase ATY47_14195 PF13542 Helix-turn-helix domain of transposase family ISL3 ATY47_14195 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 ATY47_14210 PF17768 RecJ OB domain ATY47_14210 PF01368 DHH family ATY47_14210 PF02272 DHHA1 domain ATY47_14220 PF01272 Transcription elongation factor, GreA/GreB, C-term ATY47_14220 PF03449 Transcription elongation factor, N-terminal ATY47_14225 PF02142 MGS-like domain ATY47_14225 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ATY47_14225 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ATY47_14235 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ATY47_14235 PF00117 Glutamine amidotransferase class-I ATY47_14240 PF05173 Dihydrodipicolinate reductase, C-terminus ATY47_14240 PF01113 Dihydrodipicolinate reductase, N-terminus ATY47_14250 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_14255 PF03473 MOSC domain ATY47_14255 PF03475 3-alpha domain ATY47_14260 PF00155 Aminotransferase class I and II ATY47_14280 PF02421 Ferrous iron transport protein B ATY47_14280 PF07664 Ferrous iron transport protein B C terminus ATY47_14280 PF07670 Nucleoside recognition ATY47_14290 PF00378 Enoyl-CoA hydratase/isomerase ATY47_14300 PF00682 HMGL-like ATY47_14305 PF00106 short chain dehydrogenase ATY47_14310 PF01132 Elongation factor P (EF-P) OB domain ATY47_14310 PF08207 Elongation factor P (EF-P) KOW-like domain ATY47_14310 PF09285 Elongation factor P, C-terminal ATY47_14325 PF00665 Integrase core domain ATY47_14325 PF13936 Helix-turn-helix domain ATY47_14335 PF00083 Sugar (and other) transporter ATY47_14345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ATY47_14345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ATY47_14360 PF17137 Domain of unknown function (DUF5110) ATY47_14360 PF16338 Domain of unknown function (DUF4968) ATY47_14360 PF01055 Glycosyl hydrolases family 31 ATY47_14370 PF03466 LysR substrate binding domain ATY47_14370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY47_14375 PF01081 KDPG and KHG aldolase ATY47_14380 PF13378 Enolase C-terminal domain-like ATY47_14380 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ATY47_14385 PF08450 SMP-30/Gluconolactonase/LRE-like region ATY47_14390 PF05035 2-keto-3-deoxy-galactonokinase ATY47_14395 PF00037 4Fe-4S binding domain ATY47_14395 PF11953 Domain of unknown function (DUF3470) ATY47_14405 PF00701 Dihydrodipicolinate synthetase family ATY47_14420 PF00578 AhpC/TSA family ATY47_14425 PF02562 PhoH-like protein ATY47_14425 PF13638 PIN domain ATY47_14435 PF08543 Phosphomethylpyrimidine kinase ATY47_14465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY47_14465 PF03466 LysR substrate binding domain ATY47_14470 PF02678 Pirin ATY47_14470 PF17954 Quercetinase C-terminal cupin domain ATY47_14495 PF00772 DnaB-like helicase N terminal domain ATY47_14495 PF03796 DnaB-like helicase C terminal domain ATY47_14515 PF02599 Global regulator protein family ATY47_14520 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ATY47_14520 PF02272 DHHA1 domain ATY47_14520 PF01411 tRNA synthetases class II (A) ATY47_14525 PF02631 RecX family ATY47_14530 PF00154 recA bacterial DNA recombination protein ATY47_14535 PF01726 LexA DNA binding domain ATY47_14535 PF00717 Peptidase S24-like ATY47_14540 PF03109 ABC1 family ATY47_14545 PF02464 Competence-damaged protein ATY47_14550 PF01926 50S ribosome-binding GTPase ATY47_14550 PF13167 GTP-binding GTPase N-terminal ATY47_14550 PF16360 GTP-binding GTPase Middle Region ATY47_14555 PF17209 Hfq protein ATY47_14565 PF00809 Pterin binding enzyme ATY47_14570 PF17862 AAA+ lid domain ATY47_14570 PF06480 FtsH Extracellular ATY47_14570 PF01434 Peptidase family M41 ATY47_14570 PF00004 ATPase family associated with various cellular activities (AAA) ATY47_14575 PF01728 FtsJ-like methyltransferase ATY47_14580 PF01985 CRS1 / YhbY (CRM) domain ATY47_14590 PF01551 Peptidase family M23 ATY47_14590 PF01476 LysM domain ATY47_14595 PF09335 SNARE associated Golgi protein ATY47_14605 PF01975 Survival protein SurE ATY47_14610 PF01713 Smr domain ATY47_14615 PF01142 tRNA pseudouridine synthase D (TruD) ATY47_14620 PF02542 YgbB family ATY47_14625 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ATY47_14630 PF04977 Septum formation initiator ATY47_14635 PF03952 Enolase, N-terminal domain ATY47_14635 PF00113 Enolase, C-terminal TIM barrel domain ATY47_14645 PF00793 DAHP synthetase I family ATY47_14650 PF06418 CTP synthase N-terminus ATY47_14650 PF00117 Glutamine amidotransferase class-I ATY47_14660 PF00204 DNA gyrase B ATY47_14660 PF00986 DNA gyrase B subunit, carboxyl terminus ATY47_14660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_14660 PF01751 Toprim domain ATY47_14675 PF02698 DUF218 domain ATY47_14680 PF01384 Phosphate transporter family ATY47_14690 PF00571 CBS domain ATY47_14690 PF01595 Cyclin M transmembrane N-terminal domain ATY47_14690 PF03471 Transporter associated domain ATY47_14705 PF00296 Luciferase-like monooxygenase ATY47_14710 PF07690 Major Facilitator Superfamily ATY47_14715 PF00664 ABC transporter transmembrane region ATY47_14715 PF00005 ABC transporter ATY47_14720 PF00005 ABC transporter ATY47_14740 PF13579 Glycosyl transferase 4-like domain ATY47_14740 PF00534 Glycosyl transferases group 1 ATY47_14760 PF08241 Methyltransferase domain ATY47_14775 PF00535 Glycosyl transferase family 2 ATY47_14780 PF01943 Polysaccharide biosynthesis protein ATY47_14785 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ATY47_14805 PF05523 WxcM-like, C-terminal ATY47_14820 PF00034 Cytochrome c ATY47_14830 PF04542 Sigma-70 region 2 ATY47_14830 PF08281 Sigma-70, region 4 ATY47_14840 PF00082 Subtilase family ATY47_14845 PF01578 Cytochrome C assembly protein ATY47_14850 PF04995 Heme exporter protein D (CcmD) ATY47_14855 PF03100 CcmE ATY47_14860 PF01578 Cytochrome C assembly protein ATY47_14860 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ATY47_14865 PF08534 Redoxin ATY47_14870 PF03918 Cytochrome C biogenesis protein ATY47_14895 PF03377 TAL effector repeat ATY47_14910 PF03377 TAL effector repeat ATY47_14915 PF00873 AcrB/AcrD/AcrF family ATY47_14925 PF00873 AcrB/AcrD/AcrF family ATY47_14930 PF00529 HlyD membrane-fusion protein of T1SS ATY47_14930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ATY47_14960 PF01527 Transposase ATY47_14965 PF13276 HTH-like domain ATY47_14975 PF01526 Tn3 transposase DDE domain ATY47_14975 PF13700 Domain of unknown function (DUF4158) ATY47_14980 PF00486 Transcriptional regulatory protein, C terminal ATY47_14980 PF00072 Response regulator receiver domain ATY47_14985 PF00034 Cytochrome c ATY47_14985 PF03150 Di-haem cytochrome c peroxidase ATY47_14990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_14990 PF00512 His Kinase A (phospho-acceptor) domain ATY47_14995 PF03466 LysR substrate binding domain ATY47_14995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY47_15025 PF00069 Protein kinase domain ATY47_15065 PF04717 Type VI secretion system, phage-baseplate injector ATY47_15065 PF16671 Actin cross-linking domain ATY47_15075 PF01609 Transposase DDE domain ATY47_15075 PF05598 Transposase domain (DUF772) ATY47_15085 PF17871 AAA lid domain ATY47_15085 PF10431 C-terminal, D2-small domain, of ClpB protein ATY47_15085 PF00004 ATPase family associated with various cellular activities (AAA) ATY47_15085 PF07724 AAA domain (Cdc48 subfamily) ATY47_15110 PF05638 Type VI secretion system effector, Hcp ATY47_15130 PF05598 Transposase domain (DUF772) ATY47_15130 PF01609 Transposase DDE domain ATY47_15145 PF05598 Transposase domain (DUF772) ATY47_15145 PF01609 Transposase DDE domain ATY47_15175 PF13683 Integrase core domain ATY47_15175 PF13276 HTH-like domain ATY47_15185 PF01106 NifU-like domain ATY47_15190 PF01329 Pterin 4 alpha carbinolamine dehydratase ATY47_15200 PF02535 ZIP Zinc transporter ATY47_15205 PF02535 ZIP Zinc transporter ATY47_15210 PF11737 Protein of unknown function (DUF3300) ATY47_15215 PF00849 RNA pseudouridylate synthase ATY47_15215 PF01479 S4 domain ATY47_15220 PF12111 Polyribonucleotide phosphorylase C terminal ATY47_15220 PF10150 Ribonuclease E/G family ATY47_15220 PF00575 S1 RNA binding domain ATY47_15235 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_15240 PF00196 Bacterial regulatory proteins, luxR family ATY47_15240 PF00072 Response regulator receiver domain ATY47_15250 PF01609 Transposase DDE domain ATY47_15250 PF05598 Transposase domain (DUF772) ATY47_15260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATY47_15270 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ATY47_15270 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ATY47_15270 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ATY47_15280 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ATY47_15280 PF01648 4'-phosphopantetheinyl transferase superfamily ATY47_15310 PF05598 Transposase domain (DUF772) ATY47_15310 PF01609 Transposase DDE domain ATY47_15340 PF03861 ANTAR domain ATY47_15340 PF00072 Response regulator receiver domain ATY47_15350 PF10414 Sirohaem synthase dimerisation region ATY47_15350 PF14824 Sirohaem biosynthesis protein central ATY47_15350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ATY47_15375 PF12804 MobA-like NTP transferase domain ATY47_15380 PF00994 Probable molybdopterin binding domain ATY47_15380 PF03454 MoeA C-terminal region (domain IV) ATY47_15380 PF03453 MoeA N-terminal region (domain I and II) ATY47_15440 PF07715 TonB-dependent Receptor Plug Domain ATY47_15440 PF00593 TonB dependent receptor ATY47_15460 PF04616 Glycosyl hydrolases family 43 ATY47_15465 PF07532 Bacterial Ig-like domain (group 4) ATY47_15470 PF07715 TonB-dependent Receptor Plug Domain ATY47_15470 PF00593 TonB dependent receptor ATY47_15480 PF09286 Pro-kumamolisin, activation domain ATY47_15480 PF00082 Subtilase family ATY47_15525 PF13520 Amino acid permease ATY47_15540 PF00557 Metallopeptidase family M24 ATY47_15540 PF01321 Creatinase/Prolidase N-terminal domain ATY47_15545 PF00171 Aldehyde dehydrogenase family ATY47_15550 PF00701 Dihydrodipicolinate synthetase family ATY47_15555 PF04324 BFD-like [2Fe-2S] binding domain ATY47_15555 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY47_15565 PF01266 FAD dependent oxidoreductase ATY47_15570 PF05544 Proline racemase ATY47_15580 PF02881 SRP54-type protein, helical bundle domain ATY47_15580 PF00448 SRP54-type protein, GTPase domain ATY47_15590 PF00730 HhH-GPD superfamily base excision DNA repair protein ATY47_15590 PF14815 NUDIX domain ATY47_15590 PF00633 Helix-hairpin-helix motif ATY47_15595 PF04362 Bacterial Fe(2+) trafficking ATY47_15600 PF00072 Response regulator receiver domain ATY47_15600 PF13426 PAS domain ATY47_15600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_15605 PF05598 Transposase domain (DUF772) ATY47_15700 PF03808 Glycosyl transferase WecB/TagA/CpsF family ATY47_15715 PF14667 Polysaccharide biosynthesis C-terminal domain ATY47_15725 PF13439 Glycosyltransferase Family 4 ATY47_15725 PF00534 Glycosyl transferases group 1 ATY47_15745 PF02397 Bacterial sugar transferase ATY47_15765 PF13411 MerR HTH family regulatory protein ATY47_15770 PF00216 Bacterial DNA-binding protein ATY47_15775 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ATY47_15775 PF03483 B3/4 domain ATY47_15775 PF03484 tRNA synthetase B5 domain ATY47_15775 PF01588 Putative tRNA binding domain ATY47_15775 PF03147 Ferredoxin-fold anticodon binding domain ATY47_15780 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ATY47_15780 PF01409 tRNA synthetases class II core domain (F) ATY47_15785 PF00453 Ribosomal protein L20 ATY47_15790 PF01632 Ribosomal protein L35 ATY47_15795 PF00707 Translation initiation factor IF-3, C-terminal domain ATY47_15795 PF05198 Translation initiation factor IF-3, N-terminal domain ATY47_15800 PF03129 Anticodon binding domain ATY47_15800 PF02824 TGS domain ATY47_15800 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ATY47_15800 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ATY47_15810 PF01527 Transposase ATY47_15830 PF17757 UvrB interaction domain ATY47_15830 PF12344 Ultra-violet resistance protein B ATY47_15830 PF02151 UvrB/uvrC motif ATY47_15830 PF00271 Helicase conserved C-terminal domain ATY47_15830 PF04851 Type III restriction enzyme, res subunit ATY47_15835 PF07963 Prokaryotic N-terminal methylation motif ATY47_15835 PF00114 Pilin (bacterial filament) ATY47_15845 PF07963 Prokaryotic N-terminal methylation motif ATY47_15845 PF00114 Pilin (bacterial filament) ATY47_15850 PF05567 Neisseria PilC beta-propeller domain ATY47_15870 PF12019 Type II transport protein GspH ATY47_15870 PF07963 Prokaryotic N-terminal methylation motif ATY47_15875 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ATY47_15875 PF11892 Domain of unknown function (DUF3412) ATY47_15875 PF03641 Possible lysine decarboxylase ATY47_15880 PF00593 TonB dependent receptor ATY47_15885 PF01914 MarC family integral membrane protein ATY47_15895 PF00462 Glutaredoxin ATY47_15900 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ATY47_15900 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ATY47_15905 PF02222 ATP-grasp domain ATY47_15905 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ATY47_15910 PF00731 AIR carboxylase ATY47_15920 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ATY47_15920 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ATY47_15930 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ATY47_15930 PF00575 S1 RNA binding domain ATY47_15930 PF03725 3' exoribonuclease family, domain 2 ATY47_15930 PF00013 KH domain ATY47_15930 PF01138 3' exoribonuclease family, domain 1 ATY47_15935 PF00312 Ribosomal protein S15 ATY47_15940 PF01509 TruB family pseudouridylate synthase (N terminal domain) ATY47_15940 PF16198 tRNA pseudouridylate synthase B C-terminal domain ATY47_15940 PF09157 Pseudouridine synthase II TruB, C-terminal ATY47_15945 PF02033 Ribosome-binding factor A ATY47_15950 PF08364 Bacterial translation initiation factor IF-2 associated region ATY47_15950 PF00009 Elongation factor Tu GTP binding domain ATY47_15950 PF04760 Translation initiation factor IF-2, N-terminal region ATY47_15950 PF11987 Translation-initiation factor 2 ATY47_15955 PF08529 NusA N-terminal domain ATY47_15955 PF13184 NusA-like KH domain ATY47_15955 PF00575 S1 RNA binding domain ATY47_15960 PF02576 RimP N-terminal domain ATY47_15960 PF17384 RimP C-terminal SH3 domain ATY47_15970 PF00361 Proton-conducting membrane transporter ATY47_15975 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus ATY47_15975 PF00361 Proton-conducting membrane transporter ATY47_15980 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ATY47_15980 PF00361 Proton-conducting membrane transporter ATY47_15985 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ATY47_15990 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ATY47_15995 PF12838 4Fe-4S dicluster domain ATY47_16000 PF00146 NADH dehydrogenase ATY47_16005 PF00384 Molybdopterin oxidoreductase ATY47_16005 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal ATY47_16005 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ATY47_16010 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ATY47_16010 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ATY47_16010 PF10531 SLBB domain ATY47_16020 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ATY47_16025 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ATY47_16030 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ATY47_16035 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ATY47_16050 PF00121 Triosephosphate isomerase ATY47_16070 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_16080 PF00990 Diguanylate cyclase, GGDEF domain ATY47_16080 PF03707 Bacterial signalling protein N terminal repeat ATY47_16080 PF00563 EAL domain ATY47_16095 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ATY47_16095 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ATY47_16095 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ATY47_16095 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ATY47_16100 PF17848 Acetyl-coA carboxylase zinc finger domain ATY47_16100 PF01039 Carboxyl transferase domain ATY47_16105 PF00290 Tryptophan synthase alpha chain ATY47_16115 PF00291 Pyridoxal-phosphate dependent enzyme ATY47_16120 PF03466 LysR substrate binding domain ATY47_16120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY47_16125 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ATY47_16130 PF01416 tRNA pseudouridine synthase ATY47_16145 PF01118 Semialdehyde dehydrogenase, NAD binding domain ATY47_16145 PF02774 Semialdehyde dehydrogenase, dimerisation domain ATY47_16150 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ATY47_16150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATY47_16155 PF01264 Chorismate synthase ATY47_16160 PF05175 Methyltransferase small domain ATY47_16165 PF02630 SCO1/SenC ATY47_16170 PF02666 Phosphatidylserine decarboxylase ATY47_16180 PF05872 Bacterial protein of unknown function (DUF853) ATY47_16185 PF13936 Helix-turn-helix domain ATY47_16185 PF00665 Integrase core domain ATY47_16200 PF03449 Transcription elongation factor, N-terminal ATY47_16200 PF01272 Transcription elongation factor, GreA/GreB, C-term ATY47_16205 PF04055 Radical SAM superfamily ATY47_16205 PF18693 TRAM domain ATY47_16205 PF00919 Uncharacterized protein family UPF0004 ATY47_16210 PF01738 Dienelactone hydrolase family ATY47_16225 PF00692 dUTPase ATY47_16230 PF10609 NUBPL iron-transfer P-loop NTPase ATY47_16265 PF01266 FAD dependent oxidoreductase ATY47_16270 PF04235 Protein of unknown function (DUF418) ATY47_16275 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATY47_16280 PF00877 NlpC/P60 family ATY47_16285 PF00877 NlpC/P60 family ATY47_16300 PF00375 Sodium:dicarboxylate symporter family ATY47_16305 PF00245 Alkaline phosphatase ATY47_16310 PF09179 TilS substrate binding domain ATY47_16310 PF01171 PP-loop family ATY47_16310 PF11734 TilS substrate C-terminal domain ATY47_16315 PF02609 Exonuclease VII small subunit ATY47_16320 PF00348 Polyprenyl synthetase ATY47_16340 PF01523 Putative modulator of DNA gyrase ATY47_16345 PF04751 Protein of unknown function (DUF615) ATY47_16350 PF01523 Putative modulator of DNA gyrase ATY47_16355 PF13116 Protein of unknown function ATY47_16355 PF13502 AsmA-like C-terminal region ATY47_16360 PF10150 Ribonuclease E/G family ATY47_16360 PF00575 S1 RNA binding domain ATY47_16365 PF02545 Maf-like protein ATY47_16370 PF04402 Protein of unknown function (DUF541) ATY47_16385 PF02590 Predicted SPOUT methyltransferase ATY47_16405 PF01467 Cytidylyltransferase-like ATY47_16420 PF08264 Anticodon-binding domain of tRNA ATY47_16420 PF00133 tRNA synthetases class I (I, L, M and V) ATY47_16420 PF13603 Leucyl-tRNA synthetase, Domain 2 ATY47_16430 PF00085 Thioredoxin ATY47_16445 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_16495 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_16505 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ATY47_16505 PF00128 Alpha amylase, catalytic domain ATY47_16510 PF05598 Transposase domain (DUF772) ATY47_16510 PF01609 Transposase DDE domain ATY47_16515 PF05598 Transposase domain (DUF772) ATY47_16515 PF01609 Transposase DDE domain ATY47_16540 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_16545 PF13936 Helix-turn-helix domain ATY47_16545 PF00665 Integrase core domain ATY47_16570 PF13683 Integrase core domain ATY47_16570 PF13276 HTH-like domain ATY47_16580 PF01527 Transposase ATY47_16605 PF00657 GDSL-like Lipase/Acylhydrolase ATY47_16605 PF03797 Autotransporter beta-domain ATY47_16615 PF05690 Thiazole biosynthesis protein ThiG ATY47_16620 PF02390 Putative methyltransferase ATY47_16625 PF02080 TrkA-C domain ATY47_16625 PF03600 Citrate transporter ATY47_16655 PF13936 Helix-turn-helix domain ATY47_16655 PF00665 Integrase core domain ATY47_16660 PF01557 Fumarylacetoacetate (FAA) hydrolase family ATY47_16665 PF01741 Large-conductance mechanosensitive channel, MscL ATY47_16675 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_16685 PF00135 Carboxylesterase family ATY47_16690 PF08032 RNA 2'-O ribose methyltransferase substrate binding ATY47_16690 PF00588 SpoU rRNA Methylase family ATY47_16720 PF01433 Peptidase family M1 domain ATY47_16720 PF11838 ERAP1-like C-terminal domain ATY47_16725 PF00873 AcrB/AcrD/AcrF family ATY47_16730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ATY47_16730 PF00529 HlyD membrane-fusion protein of T1SS ATY47_16735 PF00009 Elongation factor Tu GTP binding domain ATY47_16740 PF01507 Phosphoadenosine phosphosulfate reductase family ATY47_16745 PF00175 Oxidoreductase NAD-binding domain ATY47_16745 PF00258 Flavodoxin ATY47_16745 PF00667 FAD binding domain ATY47_16750 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ATY47_16750 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ATY47_16755 PF01507 Phosphoadenosine phosphosulfate reductase family ATY47_16775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_16775 PF00672 HAMP domain ATY47_16775 PF00512 His Kinase A (phospho-acceptor) domain ATY47_16775 PF01627 Hpt domain ATY47_16775 PF00072 Response regulator receiver domain ATY47_16785 PF03466 LysR substrate binding domain ATY47_16785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY47_16790 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ATY47_16790 PF14824 Sirohaem biosynthesis protein central ATY47_16790 PF10414 Sirohaem synthase dimerisation region ATY47_16795 PF00291 Pyridoxal-phosphate dependent enzyme ATY47_16810 PF01661 Macro domain ATY47_16815 PF00274 Fructose-bisphosphate aldolase class-I ATY47_16820 PF00224 Pyruvate kinase, barrel domain ATY47_16820 PF02887 Pyruvate kinase, alpha/beta domain ATY47_16830 PF00162 Phosphoglycerate kinase ATY47_16860 PF18011 C-terminal domain found in long catalases ATY47_16860 PF06628 Catalase-related immune-responsive ATY47_16860 PF00199 Catalase ATY47_16875 PF01609 Transposase DDE domain ATY47_16875 PF05598 Transposase domain (DUF772) ATY47_16895 PF02311 AraC-like ligand binding domain ATY47_16895 PF12833 Helix-turn-helix domain ATY47_16915 PF05598 Transposase domain (DUF772) ATY47_16930 PF00326 Prolyl oligopeptidase family ATY47_16930 PF07676 WD40-like Beta Propeller Repeat ATY47_16930 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ATY47_16950 PF05598 Transposase domain (DUF772) ATY47_16950 PF01609 Transposase DDE domain ATY47_16955 PF03169 OPT oligopeptide transporter protein ATY47_16970 PF02811 PHP domain ATY47_16970 PF14579 Helix-hairpin-helix motif ATY47_16970 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ATY47_16970 PF07733 Bacterial DNA polymerase III alpha NTPase domain ATY47_16985 PF00717 Peptidase S24-like ATY47_16985 PF01726 LexA DNA binding domain ATY47_17015 PF13456 Reverse transcriptase-like ATY47_17015 PF00300 Histidine phosphatase superfamily (branch 1) ATY47_17055 PF18766 SWI2/SNF2 ATPase ATY47_17055 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ATY47_17055 PF11867 Domain of unknown function (DUF3387) ATY47_17070 PF01909 Nucleotidyltransferase domain ATY47_17075 PF08780 Nucleotidyltransferase substrate binding protein like ATY47_17080 PF02384 N-6 DNA Methylase ATY47_17100 PF08463 EcoEI R protein C-terminal ATY47_17100 PF04851 Type III restriction enzyme, res subunit ATY47_17100 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ATY47_17100 PF00271 Helicase conserved C-terminal domain ATY47_17110 PF02384 N-6 DNA Methylase ATY47_17115 PF01420 Type I restriction modification DNA specificity domain ATY47_17170 PF16671 Actin cross-linking domain ATY47_17170 PF04717 Type VI secretion system, phage-baseplate injector ATY47_17180 PF10431 C-terminal, D2-small domain, of ClpB protein ATY47_17180 PF00004 ATPase family associated with various cellular activities (AAA) ATY47_17180 PF07724 AAA domain (Cdc48 subfamily) ATY47_17180 PF17871 AAA lid domain ATY47_17240 PF04717 Type VI secretion system, phage-baseplate injector ATY47_17240 PF16671 Actin cross-linking domain ATY47_17245 PF00182 Chitinase class I ATY47_17250 PF04717 Type VI secretion system, phage-baseplate injector ATY47_17250 PF16671 Actin cross-linking domain ATY47_17305 PF04717 Type VI secretion system, phage-baseplate injector ATY47_17305 PF16671 Actin cross-linking domain ATY47_17330 PF04717 Type VI secretion system, phage-baseplate injector ATY47_17340 PF05598 Transposase domain (DUF772) ATY47_17340 PF01609 Transposase DDE domain ATY47_17350 PF03781 Sulfatase-modifying factor enzyme 1 ATY47_17360 PF04717 Type VI secretion system, phage-baseplate injector ATY47_17375 PF04972 BON domain ATY47_17375 PF00691 OmpA family ATY47_17410 PF01527 Transposase ATY47_17415 PF02222 ATP-grasp domain ATY47_17440 PF00730 HhH-GPD superfamily base excision DNA repair protein ATY47_17465 PF00196 Bacterial regulatory proteins, luxR family ATY47_17465 PF00072 Response regulator receiver domain ATY47_17470 PF07730 Histidine kinase ATY47_17480 PF03775 Septum formation inhibitor MinC, C-terminal domain ATY47_17480 PF05209 Septum formation inhibitor MinC, N-terminal domain ATY47_17485 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ATY47_17490 PF03776 Septum formation topological specificity factor MinE ATY47_17500 PF08521 Two-component sensor kinase N-terminal ATY47_17500 PF00512 His Kinase A (phospho-acceptor) domain ATY47_17500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_17505 PF00072 Response regulator receiver domain ATY47_17505 PF00486 Transcriptional regulatory protein, C terminal ATY47_17510 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ATY47_17520 PF00884 Sulfatase ATY47_17520 PF08019 Phosphoethanolamine transferase EptA/EptB ATY47_17540 PF00664 ABC transporter transmembrane region ATY47_17540 PF03412 Peptidase C39 family ATY47_17540 PF00005 ABC transporter ATY47_17560 PF02347 Glycine cleavage system P-protein ATY47_17595 PF01527 Transposase ATY47_17605 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_17620 PF01196 Ribosomal protein L17 ATY47_17625 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ATY47_17625 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ATY47_17625 PF01000 RNA polymerase Rpb3/RpoA insert domain ATY47_17630 PF01479 S4 domain ATY47_17630 PF00163 Ribosomal protein S4/S9 N-terminal domain ATY47_17635 PF00411 Ribosomal protein S11 ATY47_17640 PF00416 Ribosomal protein S13/S18 ATY47_17645 PF00344 SecY translocase ATY47_17650 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ATY47_17655 PF00327 Ribosomal protein L30p/L7e ATY47_17660 PF00333 Ribosomal protein S5, N-terminal domain ATY47_17660 PF03719 Ribosomal protein S5, C-terminal domain ATY47_17665 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ATY47_17670 PF00347 Ribosomal protein L6 ATY47_17675 PF00410 Ribosomal protein S8 ATY47_17680 PF00253 Ribosomal protein S14p/S29e ATY47_17685 PF00673 ribosomal L5P family C-terminus ATY47_17685 PF00281 Ribosomal protein L5 ATY47_17690 PF00467 KOW motif ATY47_17690 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ATY47_17695 PF00238 Ribosomal protein L14p/L23e ATY47_17700 PF00366 Ribosomal protein S17 ATY47_17705 PF00831 Ribosomal L29 protein ATY47_17710 PF00252 Ribosomal protein L16p/L10e ATY47_17715 PF00189 Ribosomal protein S3, C-terminal domain ATY47_17715 PF07650 KH domain ATY47_17720 PF00237 Ribosomal protein L22p/L17e ATY47_17725 PF00203 Ribosomal protein S19 ATY47_17730 PF03947 Ribosomal Proteins L2, C-terminal domain ATY47_17730 PF00181 Ribosomal Proteins L2, RNA binding domain ATY47_17735 PF00276 Ribosomal protein L23 ATY47_17740 PF00573 Ribosomal protein L4/L1 family ATY47_17745 PF00297 Ribosomal protein L3 ATY47_17750 PF00338 Ribosomal protein S10p/S20e ATY47_17760 PF03143 Elongation factor Tu C-terminal domain ATY47_17760 PF03144 Elongation factor Tu domain 2 ATY47_17760 PF00009 Elongation factor Tu GTP binding domain ATY47_17765 PF03144 Elongation factor Tu domain 2 ATY47_17765 PF00009 Elongation factor Tu GTP binding domain ATY47_17765 PF03764 Elongation factor G, domain IV ATY47_17765 PF14492 Elongation Factor G, domain II ATY47_17765 PF00679 Elongation factor G C-terminus ATY47_17770 PF00177 Ribosomal protein S7p/S5e ATY47_17775 PF00164 Ribosomal protein S12/S23 ATY47_17780 PF05000 RNA polymerase Rpb1, domain 4 ATY47_17780 PF04983 RNA polymerase Rpb1, domain 3 ATY47_17780 PF04997 RNA polymerase Rpb1, domain 1 ATY47_17780 PF04998 RNA polymerase Rpb1, domain 5 ATY47_17780 PF00623 RNA polymerase Rpb1, domain 2 ATY47_17785 PF04565 RNA polymerase Rpb2, domain 3 ATY47_17785 PF10385 RNA polymerase beta subunit external 1 domain ATY47_17785 PF04560 RNA polymerase Rpb2, domain 7 ATY47_17785 PF04563 RNA polymerase beta subunit ATY47_17785 PF00562 RNA polymerase Rpb2, domain 6 ATY47_17785 PF04561 RNA polymerase Rpb2, domain 2 ATY47_17790 PF16320 Ribosomal protein L7/L12 dimerisation domain ATY47_17790 PF00542 Ribosomal protein L7/L12 C-terminal domain ATY47_17795 PF00466 Ribosomal protein L10 ATY47_17800 PF00687 Ribosomal protein L1p/L10e family ATY47_17805 PF00298 Ribosomal protein L11, RNA binding domain ATY47_17805 PF03946 Ribosomal protein L11, N-terminal domain ATY47_17810 PF02357 Transcription termination factor nusG ATY47_17810 PF00467 KOW motif ATY47_17815 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ATY47_17825 PF03144 Elongation factor Tu domain 2 ATY47_17825 PF00009 Elongation factor Tu GTP binding domain ATY47_17825 PF03143 Elongation factor Tu C-terminal domain ATY47_17845 PF01926 50S ribosome-binding GTPase ATY47_17845 PF06071 Protein of unknown function (DUF933) ATY47_17850 PF01195 Peptidyl-tRNA hydrolase ATY47_17855 PF01386 Ribosomal L25p family ATY47_17855 PF14693 Ribosomal protein TL5, C-terminal domain ATY47_17860 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ATY47_17860 PF14572 Phosphoribosyl synthetase-associated domain ATY47_17870 PF00288 GHMP kinases N terminal domain ATY47_17870 PF08544 GHMP kinases C terminal ATY47_17875 PF03550 Outer membrane lipoprotein LolB ATY47_17885 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ATY47_17885 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ATY47_17885 PF01488 Shikimate / quinate 5-dehydrogenase ATY47_17890 PF03462 PCRF domain ATY47_17890 PF00472 RF-1 domain ATY47_17900 PF00994 Probable molybdopterin binding domain ATY47_17905 PF03976 Polyphosphate kinase 2 (PPK2) ATY47_17915 PF00708 Acylphosphatase ATY47_17920 PF08534 Redoxin ATY47_17925 PF03631 Virulence factor BrkB ATY47_17930 PF03358 NADPH-dependent FMN reductase ATY47_17940 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain ATY47_17940 PF17189 Glycosyl hydrolase family 30 beta sandwich domain ATY47_17950 PF04073 Aminoacyl-tRNA editing domain ATY47_17960 PF01063 Amino-transferase class IV ATY47_17990 PF02233 NAD(P) transhydrogenase beta subunit ATY47_17995 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ATY47_18015 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ATY47_18015 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ATY47_18015 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ATY47_18030 PF01612 3'-5' exonuclease ATY47_18030 PF00476 DNA polymerase family A ATY47_18030 PF01367 5'-3' exonuclease, C-terminal SAM fold ATY47_18030 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ATY47_18035 PF00293 NUDIX domain ATY47_18045 PF00561 alpha/beta hydrolase fold ATY47_18075 PF17827 PrmC N-terminal domain ATY47_18075 PF05175 Methyltransferase small domain ATY47_18080 PF10417 C-terminal domain of 1-Cys peroxiredoxin ATY47_18080 PF00578 AhpC/TSA family ATY47_18085 PF13192 Thioredoxin domain ATY47_18085 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY47_18090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY47_18090 PF03466 LysR substrate binding domain ATY47_18095 PF03449 Transcription elongation factor, N-terminal ATY47_18095 PF01272 Transcription elongation factor, GreA/GreB, C-term ATY47_18100 PF00923 Transaldolase/Fructose-6-phosphate aldolase ATY47_18120 PF01625 Peptide methionine sulfoxide reductase ATY47_18155 PF00462 Glutaredoxin ATY47_18160 PF01435 Peptidase family M48 ATY47_18160 PF13181 Tetratricopeptide repeat ATY47_18165 PF00072 Response regulator receiver domain ATY47_18165 PF00486 Transcriptional regulatory protein, C terminal ATY47_18170 PF11808 Phosphate regulon sensor protein PhoR ATY47_18170 PF00989 PAS fold ATY47_18170 PF00512 His Kinase A (phospho-acceptor) domain ATY47_18170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_18175 PF13089 Polyphosphate kinase N-terminal domain ATY47_18175 PF02503 Polyphosphate kinase middle domain ATY47_18175 PF13090 Polyphosphate kinase C-terminal domain 2 ATY47_18175 PF17941 Polyphosphate kinase C-terminal domain 1 ATY47_18180 PF02541 Ppx/GppA phosphatase family ATY47_18190 PF01569 PAP2 superfamily ATY47_18195 PF00149 Calcineurin-like phosphoesterase ATY47_18205 PF04305 Protein of unknown function (DUF455) ATY47_18210 PF00156 Phosphoribosyl transferase domain ATY47_18225 PF02875 Mur ligase family, glutamate ligase domain ATY47_18225 PF08245 Mur ligase middle domain ATY47_18230 PF00300 Histidine phosphatase superfamily (branch 1) ATY47_18235 PF10459 Peptidase S46 ATY47_18240 PF05506 Domain of unknown function (DUF756) ATY47_18240 PF04185 Phosphoesterase family ATY47_18250 PF00107 Zinc-binding dehydrogenase ATY47_18250 PF08240 Alcohol dehydrogenase GroES-like domain ATY47_18260 PF17850 CysA C-terminal regulatory domain ATY47_18260 PF12857 TOBE-like domain ATY47_18260 PF00005 ABC transporter ATY47_18265 PF00528 Binding-protein-dependent transport system inner membrane component ATY47_18270 PF00528 Binding-protein-dependent transport system inner membrane component ATY47_18280 PF00155 Aminotransferase class I and II ATY47_18290 PF00849 RNA pseudouridylate synthase ATY47_18300 PF00691 OmpA family ATY47_18300 PF05736 OprF membrane domain ATY47_18305 PF08240 Alcohol dehydrogenase GroES-like domain ATY47_18305 PF00107 Zinc-binding dehydrogenase ATY47_18310 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY47_18310 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ATY47_18320 PF01527 Transposase ATY47_18350 PF00672 HAMP domain ATY47_18350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_18350 PF00512 His Kinase A (phospho-acceptor) domain ATY47_18350 PF01627 Hpt domain ATY47_18350 PF17149 Periplasmic sensor domain found in signal transduction proteins ATY47_18350 PF00072 Response regulator receiver domain ATY47_18355 PF00990 Diguanylate cyclase, GGDEF domain ATY47_18355 PF00072 Response regulator receiver domain ATY47_18375 PF00749 tRNA synthetases class I (E and Q), catalytic domain ATY47_18375 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ATY47_18385 PF13936 Helix-turn-helix domain ATY47_18385 PF00665 Integrase core domain ATY47_18395 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_18425 PF01728 FtsJ-like methyltransferase ATY47_18425 PF18125 RlmM ferredoxin-like domain ATY47_18430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ATY47_18430 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ATY47_18435 PF08450 SMP-30/Gluconolactonase/LRE-like region ATY47_18455 PF00378 Enoyl-CoA hydratase/isomerase ATY47_18460 PF00171 Aldehyde dehydrogenase family ATY47_18465 PF13193 AMP-binding enzyme C-terminal domain ATY47_18465 PF00501 AMP-binding enzyme ATY47_18470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY47_18470 PF03466 LysR substrate binding domain ATY47_18480 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ATY47_18510 PF01494 FAD binding domain ATY47_18515 PF01494 FAD binding domain ATY47_18525 PF01923 Cobalamin adenosyltransferase ATY47_18530 PF00850 Histone deacetylase domain ATY47_18535 PF04453 LPS transport system D ATY47_18535 PF03968 OstA-like protein ATY47_18540 PF00639 PPIC-type PPIASE domain ATY47_18540 PF09312 SurA N-terminal domain ATY47_18545 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ATY47_18550 PF00398 Ribosomal RNA adenine dimethylase ATY47_18555 PF04379 ApaG domain ATY47_18560 PF00149 Calcineurin-like phosphoesterase ATY47_18565 PF00186 Dihydrofolate reductase ATY47_18575 PF00303 Thymidylate synthase ATY47_18580 PF01790 Prolipoprotein diacylglyceryl transferase ATY47_18600 PF01219 Prokaryotic diacylglycerol kinase ATY47_18610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_18610 PF00512 His Kinase A (phospho-acceptor) domain ATY47_18610 PF08521 Two-component sensor kinase N-terminal ATY47_18615 PF00486 Transcriptional regulatory protein, C terminal ATY47_18615 PF00072 Response regulator receiver domain ATY47_18620 PF13472 GDSL-like Lipase/Acylhydrolase family ATY47_18625 PF00005 ABC transporter ATY47_18635 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ATY47_18645 PF00005 ABC transporter ATY47_18670 PF00248 Aldo/keto reductase family ATY47_18680 PF07662 Na+ dependent nucleoside transporter C-terminus ATY47_18680 PF07670 Nucleoside recognition ATY47_18680 PF01773 Na+ dependent nucleoside transporter N-terminus ATY47_18685 PF00294 pfkB family carbohydrate kinase ATY47_18700 PF01207 Dihydrouridine synthase (Dus) ATY47_18705 PF13649 Methyltransferase domain ATY47_18715 PF00438 S-adenosylmethionine synthetase, N-terminal domain ATY47_18715 PF02773 S-adenosylmethionine synthetase, C-terminal domain ATY47_18715 PF02772 S-adenosylmethionine synthetase, central domain ATY47_18725 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_18730 PF00328 Histidine phosphatase superfamily (branch 2) ATY47_18750 PF00311 Phosphoenolpyruvate carboxylase ATY47_18760 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ATY47_18760 PF05221 S-adenosyl-L-homocysteine hydrolase ATY47_18765 PF13649 Methyltransferase domain ATY47_18795 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ATY47_18810 PF09286 Pro-kumamolisin, activation domain ATY47_18810 PF00082 Subtilase family ATY47_18815 PF14765 Polyketide synthase dehydratase ATY47_18815 PF08659 KR domain ATY47_18815 PF02801 Beta-ketoacyl synthase, C-terminal domain ATY47_18815 PF00109 Beta-ketoacyl synthase, N-terminal domain ATY47_18815 PF16197 Ketoacyl-synthetase C-terminal extension ATY47_18815 PF00550 Phosphopantetheine attachment site ATY47_18815 PF08240 Alcohol dehydrogenase GroES-like domain ATY47_18815 PF00698 Acyl transferase domain ATY47_18815 PF00107 Zinc-binding dehydrogenase ATY47_18825 PF02219 Methylenetetrahydrofolate reductase ATY47_18835 PF00293 NUDIX domain ATY47_18845 PF07516 SecA Wing and Scaffold domain ATY47_18845 PF07517 SecA DEAD-like domain ATY47_18845 PF02810 SEC-C motif ATY47_18845 PF01043 SecA preprotein cross-linking domain ATY47_18850 PF01476 LysM domain ATY47_18850 PF01551 Peptidase family M23 ATY47_18860 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ATY47_18865 PF00091 Tubulin/FtsZ family, GTPase domain ATY47_18865 PF12327 FtsZ family, C-terminal domain ATY47_18870 PF02491 SHS2 domain inserted in FTSA ATY47_18875 PF08478 POTRA domain, FtsQ-type ATY47_18875 PF03799 Cell division protein FtsQ ATY47_18880 PF01820 D-ala D-ala ligase N-terminus ATY47_18880 PF07478 D-ala D-ala ligase C-terminus ATY47_18885 PF01225 Mur ligase family, catalytic domain ATY47_18885 PF02875 Mur ligase family, glutamate ligase domain ATY47_18885 PF08245 Mur ligase middle domain ATY47_18890 PF04101 Glycosyltransferase family 28 C-terminal domain ATY47_18890 PF03033 Glycosyltransferase family 28 N-terminal domain ATY47_18895 PF01098 Cell cycle protein ATY47_18900 PF00953 Glycosyl transferase family 4 ATY47_18905 PF08245 Mur ligase middle domain ATY47_18905 PF01225 Mur ligase family, catalytic domain ATY47_18905 PF02875 Mur ligase family, glutamate ligase domain ATY47_18910 PF02875 Mur ligase family, glutamate ligase domain ATY47_18910 PF01225 Mur ligase family, catalytic domain ATY47_18910 PF08245 Mur ligase middle domain ATY47_18915 PF03717 Penicillin-binding Protein dimerisation domain ATY47_18915 PF00905 Penicillin binding protein transpeptidase domain ATY47_18920 PF04999 Cell division protein FtsL ATY47_18925 PF01795 MraW methylase family ATY47_18930 PF02381 MraZ protein, putative antitoxin-like ATY47_18945 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ATY47_18955 PF02021 Uncharacterised protein family UPF0102 ATY47_18960 PF04307 LexA-binding, inner membrane-associated putative hydrolase ATY47_18965 PF02913 FAD linked oxidases, C-terminal domain ATY47_18965 PF01565 FAD binding domain ATY47_18970 PF00072 Response regulator receiver domain ATY47_18970 PF00486 Transcriptional regulatory protein, C terminal ATY47_18975 PF02702 Osmosensitive K+ channel His kinase sensor domain ATY47_18975 PF00512 His Kinase A (phospho-acceptor) domain ATY47_18975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_18975 PF13493 Domain of unknown function (DUF4118) ATY47_18975 PF13492 GAF domain ATY47_18980 PF02669 K+-transporting ATPase, c chain ATY47_18990 PF03814 Potassium-transporting ATPase A subunit ATY47_19015 PF00586 AIR synthase related protein, N-terminal domain ATY47_19015 PF02769 AIR synthase related protein, C-terminal domain ATY47_19020 PF01029 NusB family ATY47_19025 PF00885 6,7-dimethyl-8-ribityllumazine synthase ATY47_19030 PF00925 GTP cyclohydrolase II ATY47_19030 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ATY47_19035 PF00677 Lumazine binding domain ATY47_19045 PF01872 RibD C-terminal domain ATY47_19045 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ATY47_19055 PF03477 ATP cone domain ATY47_19065 PF00464 Serine hydroxymethyltransferase ATY47_19085 PF12848 ABC transporter ATY47_19085 PF00005 ABC transporter ATY47_19105 PF00756 Putative esterase ATY47_19115 PF00107 Zinc-binding dehydrogenase ATY47_19115 PF08240 Alcohol dehydrogenase GroES-like domain ATY47_19120 PF02583 Metal-sensitive transcriptional repressor ATY47_19130 PF00072 Response regulator receiver domain ATY47_19130 PF00486 Transcriptional regulatory protein, C terminal ATY47_19135 PF16527 Two-component sensor protein CpxA, periplasmic domain ATY47_19135 PF00672 HAMP domain ATY47_19135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_19135 PF00512 His Kinase A (phospho-acceptor) domain ATY47_19165 PF04107 Glutamate-cysteine ligase family 2(GCS2) ATY47_19180 PF01926 50S ribosome-binding GTPase ATY47_19185 PF00034 Cytochrome c ATY47_19205 PF02028 BCCT, betaine/carnitine/choline family transporter ATY47_19215 PF01527 Transposase ATY47_19220 PF05598 Transposase domain (DUF772) ATY47_19220 PF01609 Transposase DDE domain ATY47_19225 PF00291 Pyridoxal-phosphate dependent enzyme ATY47_19225 PF13291 ACT domain ATY47_19230 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_19240 PF05598 Transposase domain (DUF772) ATY47_19240 PF01609 Transposase DDE domain ATY47_19245 PF01527 Transposase ATY47_19265 PF12627 Probable RNA and SrmB- binding site of polymerase A ATY47_19265 PF01966 HD domain ATY47_19265 PF01743 Poly A polymerase head domain ATY47_19280 PF05598 Transposase domain (DUF772) ATY47_19280 PF01609 Transposase DDE domain ATY47_19285 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_19320 PF14883 Hypothetical glycosyl hydrolase family 13 ATY47_19320 PF01522 Polysaccharide deacetylase ATY47_19325 PF00535 Glycosyl transferase family 2 ATY47_19335 PF01979 Amidohydrolase family ATY47_19340 PF01380 SIS domain ATY47_19345 PF00356 Bacterial regulatory proteins, lacI family ATY47_19350 PF07690 Major Facilitator Superfamily ATY47_19370 PF02837 Glycosyl hydrolases family 2, sugar binding domain ATY47_19370 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ATY47_19370 PF00703 Glycosyl hydrolases family 2 ATY47_19370 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 ATY47_19370 PF16355 Domain of unknown function (DUF4982) ATY47_19405 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ATY47_19410 PF00512 His Kinase A (phospho-acceptor) domain ATY47_19410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_19415 PF00072 Response regulator receiver domain ATY47_19420 PF08446 PAS fold ATY47_19420 PF00360 Phytochrome region ATY47_19420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_19420 PF01590 GAF domain ATY47_19420 PF00512 His Kinase A (phospho-acceptor) domain ATY47_19425 PF04972 BON domain ATY47_19430 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ATY47_19430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ATY47_19435 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ATY47_19435 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ATY47_19475 PF00293 NUDIX domain ATY47_19475 PF01467 Cytidylyltransferase-like ATY47_19485 PF11818 C-terminal domain of tail specific protease (DUF3340) ATY47_19485 PF00595 PDZ domain ATY47_19485 PF03572 Peptidase family S41 ATY47_19485 PF17804 Tail specific protease N-terminal domain ATY47_19490 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ATY47_19490 PF04055 Radical SAM superfamily ATY47_19495 PF03099 Biotin/lipoate A/B protein ligase family ATY47_19500 PF04359 Protein of unknown function (DUF493) ATY47_19510 PF00768 D-alanyl-D-alanine carboxypeptidase ATY47_19510 PF07943 Penicillin-binding protein 5, C-terminal domain ATY47_19520 PF05036 Sporulation related domain ATY47_19520 PF03330 Lytic transglycolase ATY47_19525 PF13406 Transglycosylase SLT domain ATY47_19560 PF01098 Cell cycle protein ATY47_19565 PF03717 Penicillin-binding Protein dimerisation domain ATY47_19565 PF00905 Penicillin binding protein transpeptidase domain ATY47_19575 PF04085 rod shape-determining protein MreC ATY47_19585 PF00294 pfkB family carbohydrate kinase ATY47_19605 PF13673 Acetyltransferase (GNAT) domain ATY47_19620 PF13533 Biotin-lipoyl like ATY47_19630 PF01209 ubiE/COQ5 methyltransferase family ATY47_19635 PF17152 Periplasmic sensor domain ATY47_19635 PF00990 Diguanylate cyclase, GGDEF domain ATY47_19640 PF11838 ERAP1-like C-terminal domain ATY47_19640 PF01433 Peptidase family M1 domain ATY47_19655 PF10431 C-terminal, D2-small domain, of ClpB protein ATY47_19655 PF07724 AAA domain (Cdc48 subfamily) ATY47_19655 PF00004 ATPase family associated with various cellular activities (AAA) ATY47_19660 PF00227 Proteasome subunit ATY47_19665 PF00589 Phage integrase family ATY47_19665 PF02899 Phage integrase, N-terminal SAM-like domain ATY47_19690 PF00326 Prolyl oligopeptidase family ATY47_19690 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ATY47_19695 PF00155 Aminotransferase class I and II ATY47_19705 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ATY47_19705 PF00326 Prolyl oligopeptidase family ATY47_19730 PF03900 Porphobilinogen deaminase, C-terminal domain ATY47_19730 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ATY47_19735 PF04397 LytTr DNA-binding domain ATY47_19735 PF00072 Response regulator receiver domain ATY47_19740 PF06580 Histidine kinase ATY47_19740 PF07694 5TMR of 5TMR-LYT ATY47_19750 PF13632 Glycosyl transferase family group 2 ATY47_19760 PF08448 PAS fold ATY47_19760 PF00990 Diguanylate cyclase, GGDEF domain ATY47_19770 PF01740 STAS domain ATY47_19770 PF00916 Sulfate permease family ATY47_19775 PF00150 Cellulase (glycosyl hydrolase family 5) ATY47_19775 PF00553 Cellulose binding domain ATY47_19785 PF02203 Tar ligand binding domain homologue ATY47_19785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY47_19785 PF00672 HAMP domain ATY47_19790 PF00563 EAL domain ATY47_19790 PF00990 Diguanylate cyclase, GGDEF domain ATY47_19790 PF03707 Bacterial signalling protein N terminal repeat ATY47_19815 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_19830 PF01204 Trehalase ATY47_19850 PF01544 CorA-like Mg2+ transporter protein ATY47_19860 PF00324 Amino acid permease ATY47_19865 PF00553 Cellulose binding domain ATY47_19865 PF00041 Fibronectin type III domain ATY47_19865 PF01341 Glycosyl hydrolases family 6 ATY47_19870 PF03330 Lytic transglycolase ATY47_19875 PF00892 EamA-like transporter family ATY47_19900 PF07759 Protein of unknown function (DUF1615) ATY47_19935 PF00106 short chain dehydrogenase ATY47_19950 PF01527 Transposase ATY47_19960 PF00425 chorismate binding enzyme ATY47_19960 PF04715 Anthranilate synthase component I, N terminal region ATY47_19965 PF00781 Diacylglycerol kinase catalytic domain ATY47_19970 PF00583 Acetyltransferase (GNAT) family ATY47_19975 PF00834 Ribulose-phosphate 3 epimerase family ATY47_19980 PF00226 DnaJ domain ATY47_19980 PF05099 Tellurite resistance protein TerB ATY47_20000 PF01483 Proprotein convertase P-domain ATY47_20000 PF07504 Fungalysin/Thermolysin Propeptide Motif ATY47_20000 PF02868 Thermolysin metallopeptidase, alpha-helical domain ATY47_20000 PF01447 Thermolysin metallopeptidase, catalytic domain ATY47_20005 PF01447 Thermolysin metallopeptidase, catalytic domain ATY47_20005 PF01483 Proprotein convertase P-domain ATY47_20005 PF07504 Fungalysin/Thermolysin Propeptide Motif ATY47_20005 PF02868 Thermolysin metallopeptidase, alpha-helical domain ATY47_20010 PF02868 Thermolysin metallopeptidase, alpha-helical domain ATY47_20010 PF01447 Thermolysin metallopeptidase, catalytic domain ATY47_20010 PF03413 Peptidase propeptide and YPEB domain ATY47_20010 PF07504 Fungalysin/Thermolysin Propeptide Motif ATY47_20025 PF13244 Domain of unknown function (DUF4040) ATY47_20025 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ATY47_20025 PF00361 Proton-conducting membrane transporter ATY47_20025 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ATY47_20030 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ATY47_20035 PF00361 Proton-conducting membrane transporter ATY47_20045 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ATY47_20050 PF03334 Na+/H+ antiporter subunit ATY47_20055 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_20065 PF05598 Transposase domain (DUF772) ATY47_20065 PF01609 Transposase DDE domain ATY47_20070 PF04209 homogentisate 1,2-dioxygenase ATY47_20075 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ATY47_20080 PF01047 MarR family ATY47_20090 PF00854 POT family ATY47_20095 PF03301 Tryptophan 2,3-dioxygenase ATY47_20135 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_20145 PF00108 Thiolase, N-terminal domain ATY47_20145 PF02803 Thiolase, C-terminal domain ATY47_20195 PF05598 Transposase domain (DUF772) ATY47_20195 PF01609 Transposase DDE domain ATY47_20225 PF01427 D-ala-D-ala dipeptidase ATY47_20230 PF01510 N-acetylmuramoyl-L-alanine amidase ATY47_20240 PF13378 Enolase C-terminal domain-like ATY47_20240 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ATY47_20265 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_20275 PF13520 Amino acid permease ATY47_20290 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_20305 PF05360 yiaA/B two helix domain ATY47_20310 PF01609 Transposase DDE domain ATY47_20310 PF05598 Transposase domain (DUF772) ATY47_20315 PF07995 Glucose / Sorbosone dehydrogenase ATY47_20345 PF00665 Integrase core domain ATY47_20345 PF13936 Helix-turn-helix domain ATY47_20350 PF00933 Glycosyl hydrolase family 3 N terminal domain ATY47_20350 PF14310 Fibronectin type III-like domain ATY47_20350 PF01915 Glycosyl hydrolase family 3 C-terminal domain ATY47_20355 PF02152 Dihydroneopterin aldolase ATY47_20360 PF00814 Glycoprotease family ATY47_20365 PF01165 Ribosomal protein S21 ATY47_20370 PF09424 Yqey-like protein ATY47_20375 PF03631 Virulence factor BrkB ATY47_20380 PF01807 CHC2 zinc finger ATY47_20380 PF08275 DNA primase catalytic core, N-terminal domain ATY47_20380 PF10410 DnaB-helicase binding domain of primase ATY47_20380 PF08278 DNA primase DnaG DnaB-binding ATY47_20395 PF13593 SBF-like CPA transporter family (DUF4137) ATY47_20405 PF01040 UbiA prenyltransferase family ATY47_20430 PF00510 Cytochrome c oxidase subunit III ATY47_20435 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 ATY47_20440 PF00115 Cytochrome C and Quinol oxidase polypeptide I ATY47_20445 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ATY47_20445 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ATY47_20455 PF14850 DNA-binding domain of Proline dehydrogenase ATY47_20455 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ATY47_20455 PF00171 Aldehyde dehydrogenase family ATY47_20455 PF01619 Proline dehydrogenase ATY47_20460 PF01527 Transposase ATY47_20475 PF00210 Ferritin-like domain ATY47_20485 PF00293 NUDIX domain ATY47_20500 PF00380 Ribosomal protein S9/S16 ATY47_20505 PF00572 Ribosomal protein L13 ATY47_20510 PF03232 Ubiquinone biosynthesis protein COQ7 ATY47_20515 PF00893 Small Multidrug Resistance protein ATY47_20520 PF02675 S-adenosylmethionine decarboxylase ATY47_20525 PF00325 Bacterial regulatory proteins, crp family ATY47_20525 PF00027 Cyclic nucleotide-binding domain ATY47_20535 PF00218 Indole-3-glycerol phosphate synthase ATY47_20540 PF02885 Glycosyl transferase family, helical bundle domain ATY47_20540 PF00591 Glycosyl transferase family, a/b domain ATY47_20555 PF00117 Glutamine amidotransferase class-I ATY47_20565 PF01527 Transposase ATY47_20570 PF13683 Integrase core domain ATY47_20570 PF13276 HTH-like domain ATY47_20580 PF03971 Monomeric isocitrate dehydrogenase ATY47_20590 PF05598 Transposase domain (DUF772) ATY47_20625 PF05598 Transposase domain (DUF772) ATY47_20625 PF01609 Transposase DDE domain ATY47_20635 PF00872 Transposase, Mutator family ATY47_20640 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ATY47_20640 PF14489 QueF-like protein ATY47_20650 PF01546 Peptidase family M20/M25/M40 ATY47_20650 PF07687 Peptidase dimerisation domain ATY47_20655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ATY47_20660 PF00873 AcrB/AcrD/AcrF family ATY47_20665 PF00873 AcrB/AcrD/AcrF family ATY47_20670 PF07063 Domain of unknown function (DUF1338) ATY47_20700 PF00581 Rhodanese-like domain ATY47_20705 PF02556 Preprotein translocase subunit SecB ATY47_20710 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ATY47_20710 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ATY47_20720 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ATY47_20720 PF00205 Thiamine pyrophosphate enzyme, central domain ATY47_20720 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ATY47_20725 PF00512 His Kinase A (phospho-acceptor) domain ATY47_20725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_20730 PF00072 Response regulator receiver domain ATY47_20730 PF00158 Sigma-54 interaction domain ATY47_20730 PF02954 Bacterial regulatory protein, Fis family ATY47_20745 PF07690 Major Facilitator Superfamily ATY47_20750 PF00588 SpoU rRNA Methylase family ATY47_20765 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ATY47_20765 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ATY47_20770 PF13784 Fic/DOC family N-terminal ATY47_20770 PF02661 Fic/DOC family ATY47_20775 PF01555 DNA methylase ATY47_20785 PF00561 alpha/beta hydrolase fold ATY47_20790 PF03692 Putative zinc- or iron-chelating domain ATY47_20795 PF00501 AMP-binding enzyme ATY47_20800 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family ATY47_20805 PF05598 Transposase domain (DUF772) ATY47_20815 PF11871 Domain of unknown function (DUF3391) ATY47_20815 PF01966 HD domain ATY47_20820 PF07690 Major Facilitator Superfamily ATY47_20850 PF00132 Bacterial transferase hexapeptide (six repeats) ATY47_20855 PF03692 Putative zinc- or iron-chelating domain ATY47_20860 PF00920 Dehydratase family ATY47_20865 PF13495 Phage integrase, N-terminal SAM-like domain ATY47_20865 PF00589 Phage integrase family ATY47_20870 PF05598 Transposase domain (DUF772) ATY47_20880 PF01609 Transposase DDE domain ATY47_20880 PF05598 Transposase domain (DUF772) ATY47_20895 PF01218 Coproporphyrinogen III oxidase ATY47_20900 PF01367 5'-3' exonuclease, C-terminal SAM fold ATY47_20900 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ATY47_20900 PF01612 3'-5' exonuclease ATY47_20900 PF00476 DNA polymerase family A ATY47_20930 PF13286 Phosphohydrolase-associated domain ATY47_20930 PF01966 HD domain ATY47_20935 PF17831 Pyruvate dehydrogenase E1 component middle domain ATY47_20935 PF00456 Transketolase, thiamine diphosphate binding domain ATY47_20970 PF05598 Transposase domain (DUF772) ATY47_21010 PF04264 YceI-like domain ATY47_21015 PF00881 Nitroreductase family ATY47_21045 PF02592 Putative vitamin uptake transporter ATY47_21050 PF08335 GlnD PII-uridylyltransferase ATY47_21050 PF03710 Glutamate-ammonia ligase adenylyltransferase ATY47_21060 PF08450 SMP-30/Gluconolactonase/LRE-like region ATY47_21105 PF00793 DAHP synthetase I family ATY47_21115 PF00593 TonB dependent receptor ATY47_21115 PF07715 TonB-dependent Receptor Plug Domain ATY47_21125 PF00118 TCP-1/cpn60 chaperonin family ATY47_21130 PF00166 Chaperonin 10 Kd subunit ATY47_21160 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY47_21170 PF04542 Sigma-70 region 2 ATY47_21170 PF04545 Sigma-70, region 4 ATY47_21175 PF03167 Uracil DNA glycosylase superfamily ATY47_21180 PF00072 Response regulator receiver domain ATY47_21180 PF01339 CheB methylesterase ATY47_21185 PF18075 FtsX extracellular domain ATY47_21190 PF00005 ABC transporter ATY47_21195 PF00270 DEAD/DEAH box helicase ATY47_21195 PF00271 Helicase conserved C-terminal domain ATY47_21195 PF12300 ATP-dependent RNA helicase RhlB ATY47_21200 PF00085 Thioredoxin ATY47_21205 PF07497 Rho termination factor, RNA-binding domain ATY47_21205 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATY47_21205 PF07498 Rho termination factor, N-terminal domain ATY47_21215 PF01527 Transposase ATY47_21225 PF01103 Surface antigen ATY47_21225 PF17243 POTRA domain TamA domain 1 ATY47_21230 PF04357 TamB, inner membrane protein subunit of TAM complex ATY47_21260 PF07977 FabA-like domain ATY47_21265 PF01553 Acyltransferase ATY47_21275 PF00550 Phosphopantetheine attachment site ATY47_21280 PF04820 Tryptophan halogenase ATY47_21330 PF01638 HxlR-like helix-turn-helix ATY47_21335 PF05368 NmrA-like family ATY47_21345 PF03812 2-keto-3-deoxygluconate permease ATY47_21350 PF08267 Cobalamin-independent synthase, N-terminal domain ATY47_21350 PF01717 Cobalamin-independent synthase, Catalytic domain ATY47_21360 PF03358 NADPH-dependent FMN reductase ATY47_21365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY47_21365 PF03466 LysR substrate binding domain ATY47_21370 PF02677 Epoxyqueuosine reductase QueH ATY47_21380 PF00672 HAMP domain ATY47_21380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_21380 PF00512 His Kinase A (phospho-acceptor) domain ATY47_21385 PF00512 His Kinase A (phospho-acceptor) domain ATY47_21385 PF00672 HAMP domain ATY47_21385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_21390 PF00486 Transcriptional regulatory protein, C terminal ATY47_21390 PF00072 Response regulator receiver domain ATY47_21395 PF00551 Formyl transferase ATY47_21405 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ATY47_21405 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ATY47_21410 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ATY47_21415 PF02146 Sir2 family ATY47_21425 PF07690 Major Facilitator Superfamily ATY47_21430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY47_21430 PF03466 LysR substrate binding domain ATY47_21440 PF01026 TatD related DNase ATY47_21470 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_21490 PF00266 Aminotransferase class-V ATY47_21505 PF09349 OHCU decarboxylase ATY47_21505 PF01014 Uricase ATY47_21550 PF00665 Integrase core domain ATY47_21550 PF13936 Helix-turn-helix domain ATY47_21555 PF00326 Prolyl oligopeptidase family ATY47_21560 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ATY47_21560 PF00364 Biotin-requiring enzyme ATY47_21560 PF00289 Biotin carboxylase, N-terminal domain ATY47_21560 PF02785 Biotin carboxylase C-terminal domain ATY47_21565 PF01039 Carboxyl transferase domain ATY47_21570 PF02770 Acyl-CoA dehydrogenase, middle domain ATY47_21570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATY47_21570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATY47_21630 PF07683 Cobalamin synthesis protein cobW C-terminal domain ATY47_21630 PF02492 CobW/HypB/UreG, nucleotide-binding domain ATY47_21650 PF03969 AFG1-like ATPase ATY47_21655 PF03412 Peptidase C39 family ATY47_21655 PF00005 ABC transporter ATY47_21655 PF00664 ABC transporter transmembrane region ATY47_21665 PF07715 TonB-dependent Receptor Plug Domain ATY47_21665 PF00593 TonB dependent receptor ATY47_21670 PF13181 Tetratricopeptide repeat ATY47_21675 PF02092 Glycyl-tRNA synthetase beta subunit ATY47_21675 PF05746 DALR anticodon binding domain ATY47_21680 PF02091 Glycyl-tRNA synthetase alpha subunit ATY47_21685 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ATY47_21685 PF00437 Type II/IV secretion system protein ATY47_21700 PF00958 GMP synthase C terminal domain ATY47_21700 PF00117 Glutamine amidotransferase class-I ATY47_21710 PF00902 Sec-independent protein translocase protein (TatC) ATY47_21715 PF02416 mttA/Hcf106 family ATY47_21720 PF02416 mttA/Hcf106 family ATY47_21730 PF00762 Ferrochelatase ATY47_21735 PF12697 Alpha/beta hydrolase family ATY47_21750 PF04381 Putative exonuclease, RdgC ATY47_21755 PF01171 PP-loop family ATY47_21765 PF00356 Bacterial regulatory proteins, lacI family ATY47_21770 PF07477 Glycosyl hydrolase family 67 C-terminus ATY47_21770 PF07488 Glycosyl hydrolase family 67 middle domain ATY47_21770 PF03648 Glycosyl hydrolase family 67 N-terminus ATY47_21780 PF13378 Enolase C-terminal domain-like ATY47_21780 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ATY47_21785 PF04616 Glycosyl hydrolases family 43 ATY47_21785 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain ATY47_21790 PF00933 Glycosyl hydrolase family 3 N terminal domain ATY47_21790 PF14310 Fibronectin type III-like domain ATY47_21790 PF01915 Glycosyl hydrolase family 3 C-terminal domain ATY47_21790 PF07691 PA14 domain ATY47_21795 PF01232 Mannitol dehydrogenase Rossmann domain ATY47_21795 PF08125 Mannitol dehydrogenase C-terminal domain ATY47_21815 PF02614 Glucuronate isomerase ATY47_21820 PF00553 Cellulose binding domain ATY47_21820 PF00331 Glycosyl hydrolase family 10 ATY47_21820 PF03422 Carbohydrate binding module (family 6) ATY47_21825 PF03422 Carbohydrate binding module (family 6) ATY47_21825 PF00553 Cellulose binding domain ATY47_21825 PF00331 Glycosyl hydrolase family 10 ATY47_21850 PF04616 Glycosyl hydrolases family 43 ATY47_21875 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY47_21890 PF00487 Fatty acid desaturase ATY47_21895 PF00970 Oxidoreductase FAD-binding domain ATY47_21895 PF00111 2Fe-2S iron-sulfur cluster binding domain ATY47_21895 PF00175 Oxidoreductase NAD-binding domain ATY47_21900 PF00440 Bacterial regulatory proteins, tetR family ATY47_21930 PF01047 MarR family ATY47_21935 PF02566 OsmC-like protein ATY47_22015 PF01381 Helix-turn-helix ATY47_22020 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB ATY47_22025 PF13538 UvrD-like helicase C-terminal domain ATY47_22030 PF00580 UvrD/REP helicase N-terminal domain ATY47_22030 PF13361 UvrD-like helicase C-terminal domain ATY47_22030 PF12705 PD-(D/E)XK nuclease superfamily ATY47_22035 PF17946 RecC C-terminal domain ATY47_22075 PF00080 Copper/zinc superoxide dismutase (SODC) ATY47_22080 PF00080 Copper/zinc superoxide dismutase (SODC) ATY47_22085 PF00072 Response regulator receiver domain ATY47_22085 PF00158 Sigma-54 interaction domain ATY47_22085 PF02954 Bacterial regulatory protein, Fis family ATY47_22090 PF00512 His Kinase A (phospho-acceptor) domain ATY47_22090 PF00989 PAS fold ATY47_22090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY47_22095 PF00909 Ammonium Transporter Family ATY47_22100 PF00543 Nitrogen regulatory protein P-II ATY47_22105 PF00120 Glutamine synthetase, catalytic domain ATY47_22105 PF03951 Glutamine synthetase, beta-Grasp domain ATY47_22110 PF02673 Bacitracin resistance protein BacA ATY47_22150 PF03061 Thioesterase superfamily ATY47_22155 PF13091 PLD-like domain ATY47_22170 PF01883 Iron-sulfur cluster assembly protein ATY47_22170 PF10609 NUBPL iron-transfer P-loop NTPase ATY47_22190 PF01381 Helix-turn-helix ATY47_22195 PF07804 HipA-like C-terminal domain ATY47_22195 PF13657 HipA N-terminal domain ATY47_22200 PF10017 Histidine-specific methyltransferase, SAM-dependent ATY47_22205 PF03781 Sulfatase-modifying factor enzyme 1 ATY47_22205 PF12867 DinB superfamily ATY47_22215 PF00528 Binding-protein-dependent transport system inner membrane component ATY47_22220 PF00005 ABC transporter ATY47_22220 PF00571 CBS domain ATY47_22235 PF00005 ABC transporter ATY47_22245 PF01734 Patatin-like phospholipase ATY47_22260 PF01609 Transposase DDE domain ATY47_22260 PF05598 Transposase domain (DUF772) ATY47_22265 PF13683 Integrase core domain ATY47_22265 PF13276 HTH-like domain ATY47_22270 PF01527 Transposase ATY47_22285 PF00248 Aldo/keto reductase family ATY47_22290 PF16884 N-terminal domain of oxidoreductase ATY47_22290 PF00107 Zinc-binding dehydrogenase ATY47_22295 PF00248 Aldo/keto reductase family ATY47_22305 PF00849 RNA pseudouridylate synthase ATY47_22320 PF00270 DEAD/DEAH box helicase ATY47_22320 PF04408 Helicase associated domain (HA2) ATY47_22320 PF00271 Helicase conserved C-terminal domain ATY47_22320 PF08482 ATP-dependent helicase C-terminal ATY47_22325 PF07308 Protein of unknown function (DUF1456) ATY47_22330 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ATY47_22330 PF13378 Enolase C-terminal domain-like ATY47_22335 PF01557 Fumarylacetoacetate (FAA) hydrolase family ATY47_22350 PF00248 Aldo/keto reductase family ATY47_22360 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain ATY47_22360 PF04616 Glycosyl hydrolases family 43 ATY47_22380 PF00072 Response regulator receiver domain ATY47_22380 PF00196 Bacterial regulatory proteins, luxR family ATY47_22385 PF13193 AMP-binding enzyme C-terminal domain ATY47_22385 PF00501 AMP-binding enzyme ATY47_22385 PF16177 Acetyl-coenzyme A synthetase N-terminus ATY47_22400 PF04341 Protein of unknown function, DUF485 ATY47_22405 PF00474 Sodium:solute symporter family ATY47_22415 PF03372 Endonuclease/Exonuclease/phosphatase family ATY47_22425 PF04226 Transglycosylase associated protein ATY47_22430 PF01648 4'-phosphopantetheinyl transferase superfamily ATY47_22435 PF16655 PhoD-like phosphatase, N-terminal domain ATY47_22435 PF09423 PhoD-like phosphatase ATY47_22440 PF16655 PhoD-like phosphatase, N-terminal domain ATY47_22440 PF09423 PhoD-like phosphatase ATY47_22445 PF02527 rRNA small subunit methyltransferase G ATY47_22460 PF00830 Ribosomal L28 family ATY47_22465 PF00471 Ribosomal protein L33 ATY47_22485 PF04303 PrpF protein ATY47_22490 PF03737 Aldolase/RraA ATY47_22495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY47_22495 PF03466 LysR substrate binding domain ATY47_22500 PF13091 PLD-like domain ATY47_22500 PF13396 Phospholipase_D-nuclease N-terminal ATY47_22515 PF13361 UvrD-like helicase C-terminal domain ATY47_22515 PF00580 UvrD/REP helicase N-terminal domain ATY47_22530 PF13520 Amino acid permease ATY47_22535 PF02646 RmuC family ATY47_22545 PF00255 Glutathione peroxidase ATY47_22555 PF05598 Transposase domain (DUF772) ATY47_22570 PF04055 Radical SAM superfamily ATY47_22580 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ATY47_22595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATY47_22595 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ATY47_22600 PF13180 PDZ domain ATY47_22600 PF03572 Peptidase family S41 ATY47_22605 PF01551 Peptidase family M23 ATY47_22615 PF04389 Peptidase family M28 ATY47_22630 PF05598 Transposase domain (DUF772) ATY47_22665 PF02463 RecF/RecN/SMC N terminal domain ATY47_22670 PF01227 GTP cyclohydrolase I ATY47_22695 PF00083 Sugar (and other) transporter ATY47_22770 PF02595 Glycerate kinase family ATY47_22775 PF07690 Major Facilitator Superfamily ATY47_22790 PF17785 PUA-like domain ATY47_22790 PF10672 S-adenosylmethionine-dependent methyltransferase ATY47_22795 PF03741 Integral membrane protein TerC family ATY47_22800 PF01694 Rhomboid family ATY47_22805 PF03009 Glycerophosphoryl diester phosphodiesterase family ATY47_22815 PF01569 PAP2 superfamily ATY47_22820 PF12631 MnmE helical domain ATY47_22820 PF01926 50S ribosome-binding GTPase ATY47_22820 PF10396 GTP-binding protein TrmE N-terminus ATY47_22825 PF01522 Polysaccharide deacetylase ATY47_22830 PF02096 60Kd inner membrane protein ATY47_22830 PF14849 YidC periplasmic domain ATY47_22835 PF00825 Ribonuclease P ATY47_22840 PF00468 Ribosomal protein L34