ATY47_00080	PWY-5484	glycolysis II (from fructose 6-phosphate)
ATY47_00085	PWY-5913	TCA cycle VI (obligate autotrophs)
ATY47_00085	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
ATY47_00085	PWY-6638	sulfolactate degradation III
ATY47_00085	PWY-6642	(<i>R</i>)-cysteate degradation
ATY47_00085	PWY-6643	coenzyme M biosynthesis II
ATY47_00085	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
ATY47_00085	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
ATY47_00085	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
ATY47_00110	PWY-6825	phosphatidylcholine biosynthesis V
ATY47_00125	PWY-5971	palmitate biosynthesis II (bacteria and plants)
ATY47_00125	PWY-5973	<i>cis</i>-vaccenate biosynthesis
ATY47_00125	PWY-5989	stearate biosynthesis II (bacteria and plants)
ATY47_00125	PWY-6113	superpathway of mycolate biosynthesis
ATY47_00125	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
ATY47_00125	PWY-6519	8-amino-7-oxononanoate biosynthesis I
ATY47_00125	PWY-7663	gondoate biosynthesis (anaerobic)
ATY47_00125	PWY-7664	oleate biosynthesis IV (anaerobic)
ATY47_00125	PWY-7858	ATY47_00125
ATY47_00125	PWYG-321	mycolate biosynthesis
ATY47_00305	PWY-2661	trehalose biosynthesis V
ATY47_00310	PWY-5941	glycogen degradation II (eukaryotic)
ATY47_00310	PWY-6724	starch degradation II
ATY47_00310	PWY-6737	starch degradation V
ATY47_00310	PWY-7238	sucrose biosynthesis II
ATY47_00315	PWY-2661	trehalose biosynthesis V
ATY47_00320	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
ATY47_00320	PWY-622	starch biosynthesis
ATY47_00320	PWY-7900	ATY47_00320
ATY47_00325	PWY-622	starch biosynthesis
ATY47_00415	PWY-7980	ATY47_00415
ATY47_00800	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
ATY47_00805	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
ATY47_00830	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
ATY47_00830	PWY-622	starch biosynthesis
ATY47_00830	PWY-7900	ATY47_00830
ATY47_00835	PWY-2622	trehalose biosynthesis IV
ATY47_00835	PWY-7900	ATY47_00835
ATY47_00840	PWY-7900	ATY47_00840
ATY47_00905	PWY-7437	protein <i>O</i>-[<i>N</i>-acetyl]-glucosylation
ATY47_00925	PWY-40	putrescine biosynthesis I
ATY47_00925	PWY-43	putrescine biosynthesis II
ATY47_00925	PWY-6305	putrescine biosynthesis IV
ATY47_00925	PWY-6834	spermidine biosynthesis III
ATY47_01010	PWY-6519	8-amino-7-oxononanoate biosynthesis I
ATY47_01020	PWY-6519	8-amino-7-oxononanoate biosynthesis I
ATY47_01050	PWY-7199	pyrimidine deoxyribonucleosides salvage
ATY47_01080	PWY-5686	UMP biosynthesis
ATY47_01080	PWY-7790	ATY47_01080
ATY47_01080	PWY-7791	ATY47_01080
ATY47_01110	PWY-5667	CDP-diacylglycerol biosynthesis I
ATY47_01110	PWY-6453	stigma estolide biosynthesis
ATY47_01110	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
ATY47_01110	PWY-7587	oleate biosynthesis III (cyanobacteria)
ATY47_01155	PWY-6134	L-tyrosine biosynthesis IV
ATY47_01155	PWY-7158	L-phenylalanine degradation V
ATY47_01270	PWY-5874	heme degradation
ATY47_01460	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
ATY47_01460	PWY-6416	quinate degradation II
ATY47_01460	PWY-6707	gallate biosynthesis
ATY47_01485	PWY-5530	sorbitol biosynthesis II
ATY47_01685	PWY-6654	phosphopantothenate biosynthesis III
ATY47_01795	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
ATY47_01795	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
ATY47_01825	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
ATY47_01920	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
ATY47_01920	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
ATY47_01925	PWY-3961	phosphopantothenate biosynthesis II
ATY47_01940	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
ATY47_01940	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
ATY47_01940	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
ATY47_01940	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
ATY47_01940	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
ATY47_01940	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
ATY47_01960	PWY-31	canavanine degradation
ATY47_01960	PWY-4984	urea cycle
ATY47_01960	PWY-6305	putrescine biosynthesis IV
ATY47_01960	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
ATY47_02075	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
ATY47_02080	PWY-6519	8-amino-7-oxononanoate biosynthesis I
ATY47_02080	PWY-6578	8-amino-7-oxononanoate biosynthesis III
ATY47_02080	PWY-7147	8-amino-7-oxononanoate biosynthesis II
ATY47_02140	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
ATY47_02165	PWY-5392	reductive TCA cycle II
ATY47_02165	PWY-5537	pyruvate fermentation to acetate V
ATY47_02165	PWY-5538	pyruvate fermentation to acetate VI
ATY47_02165	PWY-5690	TCA cycle II (plants and fungi)
ATY47_02165	PWY-5913	TCA cycle VI (obligate autotrophs)
ATY47_02165	PWY-6728	methylaspartate cycle
ATY47_02165	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ATY47_02165	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
ATY47_02175	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
ATY47_02175	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
ATY47_02175	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
ATY47_02175	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
ATY47_02175	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
ATY47_02175	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
ATY47_02175	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
ATY47_02175	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
ATY47_02180	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
ATY47_02180	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
ATY47_02180	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
ATY47_02180	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
ATY47_02180	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
ATY47_02180	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
ATY47_02180	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
ATY47_02180	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
ATY47_02215	PWY-1361	benzoyl-CoA degradation I (aerobic)
ATY47_02215	PWY-2361	3-oxoadipate degradation
ATY47_02215	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
ATY47_02220	PWY-6041	4-sulfocatechol degradation
ATY47_02225	PWY-6041	4-sulfocatechol degradation
ATY47_02230	PWY-6123	inosine-5'-phosphate biosynthesis I
ATY47_02230	PWY-6124	inosine-5'-phosphate biosynthesis II
ATY47_02230	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
ATY47_02230	PWY-7234	inosine-5'-phosphate biosynthesis III
ATY47_02235	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
ATY47_02290	PWY-7851	ATY47_02290
ATY47_02300	PWY-6749	CMP-legionaminate biosynthesis I
ATY47_02345	PWY-5686	UMP biosynthesis
ATY47_02345	PWY-7790	ATY47_02345
ATY47_02345	PWY-7791	ATY47_02345
ATY47_02365	PWY-7883	ATY47_02365
ATY47_02465	PWY-5381	pyridine nucleotide cycling (plants)
ATY47_02465	PWY-7761	ATY47_02465
ATY47_02520	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
ATY47_02520	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
ATY47_02520	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
ATY47_02530	PWY-6123	inosine-5'-phosphate biosynthesis I
ATY47_02530	PWY-6124	inosine-5'-phosphate biosynthesis II
ATY47_02530	PWY-7234	inosine-5'-phosphate biosynthesis III
ATY47_02615	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
ATY47_02615	PWY-6416	quinate degradation II
ATY47_02615	PWY-6707	gallate biosynthesis
ATY47_02785	PWY-6168	flavin biosynthesis III (fungi)
ATY47_02785	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
ATY47_02785	PWY-7991	ATY47_02785
ATY47_03250	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
ATY47_03390	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
ATY47_03390	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
ATY47_03430	PWY-7980	ATY47_03430
ATY47_03440	PWY-7980	ATY47_03440
ATY47_03450	PWY-3461	L-tyrosine biosynthesis II
ATY47_03450	PWY-3462	L-phenylalanine biosynthesis II
ATY47_03450	PWY-6120	L-tyrosine biosynthesis III
ATY47_03450	PWY-6627	salinosporamide A biosynthesis
ATY47_03450	PWY-7626	bacilysin biosynthesis
ATY47_03460	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
ATY47_03505	PWY-6749	CMP-legionaminate biosynthesis I
ATY47_03535	PWY-5386	methylglyoxal degradation I
ATY47_03575	PWY-5971	palmitate biosynthesis II (bacteria and plants)
ATY47_03575	PWY-5973	<i>cis</i>-vaccenate biosynthesis
ATY47_03575	PWY-5989	stearate biosynthesis II (bacteria and plants)
ATY47_03575	PWY-5994	palmitate biosynthesis I (animals and fungi)
ATY47_03575	PWY-6113	superpathway of mycolate biosynthesis
ATY47_03575	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
ATY47_03575	PWY-6519	8-amino-7-oxononanoate biosynthesis I
ATY47_03575	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
ATY47_03575	PWY-7663	gondoate biosynthesis (anaerobic)
ATY47_03575	PWY-7664	oleate biosynthesis IV (anaerobic)
ATY47_03575	PWY-7858	ATY47_03575
ATY47_03575	PWYG-321	mycolate biosynthesis
ATY47_03585	PWY-181	photorespiration
ATY47_03600	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
ATY47_03725	PWY-3221	dTDP-L-rhamnose biosynthesis II
ATY47_03725	PWY-6808	dTDP-D-forosamine biosynthesis
ATY47_03725	PWY-6942	dTDP-D-desosamine biosynthesis
ATY47_03725	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
ATY47_03725	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
ATY47_03725	PWY-6974	dTDP-L-olivose biosynthesis
ATY47_03725	PWY-6976	dTDP-L-mycarose biosynthesis
ATY47_03725	PWY-7104	dTDP-L-megosamine biosynthesis
ATY47_03725	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
ATY47_03725	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
ATY47_03725	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
ATY47_03725	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
ATY47_03725	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
ATY47_03725	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
ATY47_03725	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
ATY47_03725	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
ATY47_03725	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
ATY47_03725	PWY-7688	ATY47_03725
ATY47_03725	PWY-7814	ATY47_03725
ATY47_03730	PWY-3221	dTDP-L-rhamnose biosynthesis II
ATY47_03730	PWY-6808	dTDP-D-forosamine biosynthesis
ATY47_03730	PWY-6942	dTDP-D-desosamine biosynthesis
ATY47_03730	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
ATY47_03730	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
ATY47_03730	PWY-6974	dTDP-L-olivose biosynthesis
ATY47_03730	PWY-6976	dTDP-L-mycarose biosynthesis
ATY47_03730	PWY-7104	dTDP-L-megosamine biosynthesis
ATY47_03730	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
ATY47_03730	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
ATY47_03730	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
ATY47_03730	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
ATY47_03730	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
ATY47_03730	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
ATY47_03730	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
ATY47_03730	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
ATY47_03730	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
ATY47_03730	PWY-7688	ATY47_03730
ATY47_03730	PWY-7814	ATY47_03730
ATY47_03745	PWY-5659	GDP-mannose biosynthesis
ATY47_03745	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
ATY47_03750	PWY-6749	CMP-legionaminate biosynthesis I
ATY47_03820	PWY-5669	phosphatidylethanolamine biosynthesis I
ATY47_03895	PWY-6825	phosphatidylcholine biosynthesis V
ATY47_03945	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
ATY47_03945	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
ATY47_03945	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
ATY47_04125	PWY-4381	fatty acid biosynthesis initiation I
ATY47_04135	PWY-4381	fatty acid biosynthesis initiation I
ATY47_04135	PWY-6799	fatty acid biosynthesis (plant mitochondria)
ATY47_04135	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
ATY47_04140	PWY-5367	petroselinate biosynthesis
ATY47_04140	PWY-5971	palmitate biosynthesis II (bacteria and plants)
ATY47_04140	PWY-5973	<i>cis</i>-vaccenate biosynthesis
ATY47_04140	PWY-5989	stearate biosynthesis II (bacteria and plants)
ATY47_04140	PWY-5994	palmitate biosynthesis I (animals and fungi)
ATY47_04140	PWY-6113	superpathway of mycolate biosynthesis
ATY47_04140	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
ATY47_04140	PWY-6519	8-amino-7-oxononanoate biosynthesis I
ATY47_04140	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
ATY47_04140	PWY-7663	gondoate biosynthesis (anaerobic)
ATY47_04140	PWY-7664	oleate biosynthesis IV (anaerobic)
ATY47_04140	PWY-7858	ATY47_04140
ATY47_04140	PWYG-321	mycolate biosynthesis
ATY47_04155	PWY-5958	acridone alkaloid biosynthesis
ATY47_04155	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
ATY47_04155	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
ATY47_04205	PWY-5747	2-methylcitrate cycle II
ATY47_04310	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
ATY47_04365	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
ATY47_04420	PWY-7396	butanol and isobutanol biosynthesis (engineered)
ATY47_04425	PWY-6871	3-methylbutanol biosynthesis
ATY47_04440	PWY-5101	L-isoleucine biosynthesis II
ATY47_04440	PWY-5103	L-isoleucine biosynthesis III
ATY47_04440	PWY-5104	L-isoleucine biosynthesis IV
ATY47_04440	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
ATY47_04440	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
ATY47_04440	PWY-6389	(<i>S</i>)-acetoin biosynthesis
ATY47_04440	PWY-7111	pyruvate fermentation to isobutanol (engineered)
ATY47_04445	PWY-5103	L-isoleucine biosynthesis III
ATY47_04445	PWY-7111	pyruvate fermentation to isobutanol (engineered)
ATY47_04450	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
ATY47_04475	PWY-7805	ATY47_04475
ATY47_04475	PWY-7807	ATY47_04475
ATY47_04505	PWY-1042	glycolysis IV (plant cytosol)
ATY47_04505	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
ATY47_04505	PWY-5484	glycolysis II (from fructose 6-phosphate)
ATY47_04505	PWY-7385	1,3-propanediol biosynthesis (engineered)
ATY47_04510	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
ATY47_04515	PWY-7883	ATY47_04515
ATY47_04545	PWY-1622	formaldehyde assimilation I (serine pathway)
ATY47_04545	PWY-5392	reductive TCA cycle II
ATY47_04545	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
ATY47_04545	PWY-5690	TCA cycle II (plants and fungi)
ATY47_04545	PWY-5913	TCA cycle VI (obligate autotrophs)
ATY47_04545	PWY-6728	methylaspartate cycle
ATY47_04545	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ATY47_04545	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
ATY47_04545	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
ATY47_04565	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
ATY47_04575	PWY-6164	3-dehydroquinate biosynthesis I
ATY47_04885	PWY-5386	methylglyoxal degradation I
ATY47_05005	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
ATY47_05005	PWY-7676	Kdo8N transfer to lipid IV<sub>A</sub>
ATY47_05015	PWY-6823	molybdenum cofactor biosynthesis
ATY47_05025	PWY-6823	molybdenum cofactor biosynthesis
ATY47_05035	PWY-6823	molybdenum cofactor biosynthesis
ATY47_05035	PWY-7887	ATY47_05035
ATY47_05110	PWY-6717	(1,4)-&beta;-xylan degradation
ATY47_05110	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
ATY47_05115	PWY-6769	rhamnogalacturonan type I degradation I (fungi)
ATY47_05115	PWY-6771	rhamnogalacturonan type I degradation II (bacteria)
ATY47_05215	PWY-5676	acetyl-CoA fermentation to butanoate II
ATY47_05215	PWY-5741	ethylmalonyl-CoA pathway
ATY47_05215	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
ATY47_05215	PWY-7948	ATY47_05215
ATY47_05300	PWY-1281	sulfoacetaldehyde degradation I
ATY47_05300	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
ATY47_05300	PWY-5482	pyruvate fermentation to acetate II
ATY47_05300	PWY-5485	pyruvate fermentation to acetate IV
ATY47_05300	PWY-5497	purine nucleobases degradation II (anaerobic)
ATY47_05300	PWY-6637	sulfolactate degradation II
ATY47_05300	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
ATY47_05340	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
ATY47_05340	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
ATY47_05340	PWY-6897	thiamin salvage II
ATY47_05340	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
ATY47_05340	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
ATY47_05340	PWY-7356	thiamin salvage IV (yeast)
ATY47_05340	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
ATY47_05360	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
ATY47_05360	PWY-5723	Rubisco shunt
ATY47_05390	PWY-7799	ATY47_05390
ATY47_05390	PWY-7800	ATY47_05390
ATY47_05450	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
ATY47_05505	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ATY47_05505	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
ATY47_05505	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
ATY47_05505	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ATY47_05590	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
ATY47_05590	PWY-5723	Rubisco shunt
ATY47_05590	PWY-6891	thiazole biosynthesis II (Bacillus)
ATY47_05590	PWY-6892	thiazole biosynthesis I (E. coli)
ATY47_05590	PWY-6901	superpathway of glucose and xylose degradation
ATY47_05590	PWY-7560	methylerythritol phosphate pathway II
ATY47_05725	PWY-1042	glycolysis IV (plant cytosol)
ATY47_05725	PWY-5484	glycolysis II (from fructose 6-phosphate)
ATY47_05725	PWY-6901	superpathway of glucose and xylose degradation
ATY47_05725	PWY-7003	glycerol degradation to butanol
ATY47_05860	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
ATY47_05970	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
ATY47_05970	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
ATY47_05970	PWY-7766	ATY47_05970
ATY47_05980	PWY-6164	3-dehydroquinate biosynthesis I
ATY47_05985	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
ATY47_05990	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
ATY47_05990	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
ATY47_06200	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
ATY47_06200	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
ATY47_06215	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ATY47_06215	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ATY47_06215	PWY-7953	ATY47_06215
ATY47_06235	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
ATY47_06235	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
ATY47_06250	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
ATY47_06250	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
ATY47_06250	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
ATY47_06350	PWY-6317	galactose degradation I (Leloir pathway)
ATY47_06375	PWY-723	alkylnitronates degradation
ATY47_06395	PWY-6829	tRNA methylation (yeast)
ATY47_06395	PWY-7285	methylwyosine biosynthesis
ATY47_06395	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
ATY47_06495	PWY-6269	adenosylcobalamin salvage from cobinamide II
ATY47_06495	PWY-7962	ATY47_06495
ATY47_06495	PWY-7971	ATY47_06495
ATY47_06495	PWY-7972	ATY47_06495
ATY47_06500	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
ATY47_06500	PWY-6269	adenosylcobalamin salvage from cobinamide II
ATY47_06500	PWY-7964	ATY47_06500
ATY47_06500	PWY-7965	ATY47_06500
ATY47_06500	PWY-7966	ATY47_06500
ATY47_06500	PWY-7967	ATY47_06500
ATY47_06500	PWY-7968	ATY47_06500
ATY47_06500	PWY-7969	ATY47_06500
ATY47_06500	PWY-7970	ATY47_06500
ATY47_06510	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
ATY47_06510	PWY-6269	adenosylcobalamin salvage from cobinamide II
ATY47_06510	PWY-7961	ATY47_06510
ATY47_06510	PWY-7963	ATY47_06510
ATY47_06510	PWY-7964	ATY47_06510
ATY47_06510	PWY-7965	ATY47_06510
ATY47_06510	PWY-7966	ATY47_06510
ATY47_06510	PWY-7967	ATY47_06510
ATY47_06510	PWY-7968	ATY47_06510
ATY47_06510	PWY-7969	ATY47_06510
ATY47_06510	PWY-7970	ATY47_06510
ATY47_06510	PWY-7975	ATY47_06510
ATY47_06725	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
ATY47_06795	PWY-3341	L-proline biosynthesis III
ATY47_06795	PWY-4981	L-proline biosynthesis II (from arginine)
ATY47_06795	PWY-6344	L-ornithine degradation II (Stickland reaction)
ATY47_06800	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
ATY47_06850	PWY-5686	UMP biosynthesis
ATY47_06850	PWY-7790	ATY47_06850
ATY47_06850	PWY-7791	ATY47_06850
ATY47_06880	PWY-2941	L-lysine biosynthesis II
ATY47_06880	PWY-2942	L-lysine biosynthesis III
ATY47_06880	PWY-5097	L-lysine biosynthesis VI
ATY47_06880	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
ATY47_06880	PWY-6559	spermidine biosynthesis II
ATY47_06880	PWY-6562	norspermidine biosynthesis
ATY47_06880	PWY-7153	grixazone biosynthesis
ATY47_06880	PWY-7977	ATY47_06880
ATY47_06895	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ATY47_06895	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ATY47_07050	PWY-1622	formaldehyde assimilation I (serine pathway)
ATY47_07050	PWY-5484	glycolysis II (from fructose 6-phosphate)
ATY47_07205	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
ATY47_07570	PWY-7851	ATY47_07570
ATY47_07625	PWY-5392	reductive TCA cycle II
ATY47_07625	PWY-5537	pyruvate fermentation to acetate V
ATY47_07625	PWY-5538	pyruvate fermentation to acetate VI
ATY47_07625	PWY-5690	TCA cycle II (plants and fungi)
ATY47_07625	PWY-5913	TCA cycle VI (obligate autotrophs)
ATY47_07625	PWY-6728	methylaspartate cycle
ATY47_07625	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ATY47_07625	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
ATY47_07630	PWY-5392	reductive TCA cycle II
ATY47_07630	PWY-5537	pyruvate fermentation to acetate V
ATY47_07630	PWY-5538	pyruvate fermentation to acetate VI
ATY47_07630	PWY-5690	TCA cycle II (plants and fungi)
ATY47_07630	PWY-5913	TCA cycle VI (obligate autotrophs)
ATY47_07630	PWY-6728	methylaspartate cycle
ATY47_07630	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ATY47_07630	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
ATY47_07640	PWY-5381	pyridine nucleotide cycling (plants)
ATY47_07640	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
ATY47_07640	PWY-7761	ATY47_07640
ATY47_07715	PWY-7802	ATY47_07715
ATY47_07790	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
ATY47_07790	PWY-6167	flavin biosynthesis II (archaea)
ATY47_07790	PWY-6168	flavin biosynthesis III (fungi)
ATY47_07790	PWY-7863	ATY47_07790
ATY47_07800	PWY-7884	ATY47_07800
ATY47_07805	PWY-7560	methylerythritol phosphate pathway II
ATY47_07820	PWY-3781	aerobic respiration I (cytochrome c)
ATY47_07820	PWY-4521	arsenite oxidation I (respiratory)
ATY47_07820	PWY-6692	Fe(II) oxidation
ATY47_07820	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
ATY47_07820	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
ATY47_07930	PWY-7782	ATY47_07930
ATY47_07930	PWY-7783	ATY47_07930
ATY47_08035	PWY-6703	preQ<sub>0</sub> biosynthesis
ATY47_08095	PWY-6703	preQ<sub>0</sub> biosynthesis
ATY47_08370	PWY-2722	trehalose degradation IV
ATY47_08370	PWY-2723	trehalose degradation V
ATY47_08370	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
ATY47_08370	PWY-5661	GDP-glucose biosynthesis
ATY47_08370	PWY-621	sucrose degradation III (sucrose invertase)
ATY47_08370	PWY-7238	sucrose biosynthesis II
ATY47_08370	PWY-7385	1,3-propanediol biosynthesis (engineered)
ATY47_08375	PWY-2722	trehalose degradation IV
ATY47_08375	PWY-2723	trehalose degradation V
ATY47_08375	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
ATY47_08375	PWY-5661	GDP-glucose biosynthesis
ATY47_08375	PWY-621	sucrose degradation III (sucrose invertase)
ATY47_08375	PWY-7238	sucrose biosynthesis II
ATY47_08375	PWY-7385	1,3-propanediol biosynthesis (engineered)
ATY47_08380	PWY-2722	trehalose degradation IV
ATY47_08380	PWY-2723	trehalose degradation V
ATY47_08380	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
ATY47_08380	PWY-5661	GDP-glucose biosynthesis
ATY47_08380	PWY-621	sucrose degradation III (sucrose invertase)
ATY47_08380	PWY-7238	sucrose biosynthesis II
ATY47_08380	PWY-7385	1,3-propanediol biosynthesis (engineered)
ATY47_08415	PWY-6420	pyrroloquinoline quinone biosynthesis
ATY47_08440	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ATY47_08440	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
ATY47_08440	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
ATY47_08440	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ATY47_08590	PWY-6807	xyloglucan degradation II (exoglucanase)
ATY47_08660	PWY-6902	chitin degradation II
ATY47_08660	PWY-7822	ATY47_08660
ATY47_08660	PWY-7883	ATY47_08660
ATY47_08670	PWY-6807	xyloglucan degradation II (exoglucanase)
ATY47_08680	PWY-2722	trehalose degradation IV
ATY47_08680	PWY-2723	trehalose degradation V
ATY47_08680	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
ATY47_08680	PWY-5661	GDP-glucose biosynthesis
ATY47_08680	PWY-621	sucrose degradation III (sucrose invertase)
ATY47_08680	PWY-7238	sucrose biosynthesis II
ATY47_08680	PWY-7385	1,3-propanediol biosynthesis (engineered)
ATY47_08755	PWY-7094	fatty acid salvage
ATY47_08755	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
ATY47_08785	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ATY47_08785	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
ATY47_08785	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
ATY47_08785	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ATY47_08825	PWY-801	L-homocysteine and L-cysteine interconversion
ATY47_08890	PWY-6807	xyloglucan degradation II (exoglucanase)
ATY47_08900	PWY-6807	xyloglucan degradation II (exoglucanase)
ATY47_08905	PWY-6807	xyloglucan degradation II (exoglucanase)
ATY47_08925	PWY-5642	2,4-dinitrotoluene degradation
ATY47_08955	PWY-1361	benzoyl-CoA degradation I (aerobic)
ATY47_08955	PWY-5109	2-methylbutanoate biosynthesis
ATY47_08955	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
ATY47_08955	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
ATY47_08955	PWY-5177	glutaryl-CoA degradation
ATY47_08955	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
ATY47_08955	PWY-6435	4-hydroxybenzoate biosynthesis V
ATY47_08955	PWY-6583	pyruvate fermentation to butanol I
ATY47_08955	PWY-6863	pyruvate fermentation to hexanol
ATY47_08955	PWY-6883	pyruvate fermentation to butanol II
ATY47_08955	PWY-6944	androstenedione degradation
ATY47_08955	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
ATY47_08955	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
ATY47_08955	PWY-7007	methyl ketone biosynthesis
ATY47_08955	PWY-7046	4-coumarate degradation (anaerobic)
ATY47_08955	PWY-7094	fatty acid salvage
ATY47_08955	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
ATY47_08955	PWY-735	jasmonic acid biosynthesis
ATY47_08955	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
ATY47_08955	PWY-7606	docosahexaenoate biosynthesis III (mammals)
ATY47_08955	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
ATY47_08955	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
ATY47_08955	PWY-7726	ATY47_08955
ATY47_08955	PWY-7778	ATY47_08955
ATY47_08955	PWY-7779	ATY47_08955
ATY47_09045	PWY-6902	chitin degradation II
ATY47_09045	PWY-7822	ATY47_09045
ATY47_09045	PWY-7883	ATY47_09045
ATY47_09500	PWY-4381	fatty acid biosynthesis initiation I
ATY47_09500	PWY-5743	3-hydroxypropanoate cycle
ATY47_09500	PWY-5744	glyoxylate assimilation
ATY47_09500	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
ATY47_09500	PWY-6722	candicidin biosynthesis
ATY47_09525	PWY-5971	palmitate biosynthesis II (bacteria and plants)
ATY47_09525	PWY-5973	<i>cis</i>-vaccenate biosynthesis
ATY47_09525	PWY-5989	stearate biosynthesis II (bacteria and plants)
ATY47_09525	PWY-5994	palmitate biosynthesis I (animals and fungi)
ATY47_09525	PWY-6113	superpathway of mycolate biosynthesis
ATY47_09525	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
ATY47_09525	PWY-6519	8-amino-7-oxononanoate biosynthesis I
ATY47_09525	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
ATY47_09525	PWY-7663	gondoate biosynthesis (anaerobic)
ATY47_09525	PWY-7664	oleate biosynthesis IV (anaerobic)
ATY47_09525	PWY-7858	ATY47_09525
ATY47_09525	PWYG-321	mycolate biosynthesis
ATY47_09545	PWY-7560	methylerythritol phosphate pathway II
ATY47_09550	PWY-5667	CDP-diacylglycerol biosynthesis I
ATY47_09550	PWY-5981	CDP-diacylglycerol biosynthesis III
ATY47_09550	PWY-7817	ATY47_09550
ATY47_09615	PWY-7799	ATY47_09615
ATY47_09615	PWY-7800	ATY47_09615
ATY47_09755	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ATY47_09755	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
ATY47_09755	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
ATY47_09755	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ATY47_09760	PWY-6891	thiazole biosynthesis II (Bacillus)
ATY47_09760	PWY-6892	thiazole biosynthesis I (E. coli)
ATY47_09760	PWY-7560	methylerythritol phosphate pathway II
ATY47_09840	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
ATY47_09840	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
ATY47_09845	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
ATY47_09880	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
ATY47_09880	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
ATY47_09885	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
ATY47_09890	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
ATY47_09915	PWY-6123	inosine-5'-phosphate biosynthesis I
ATY47_09915	PWY-6124	inosine-5'-phosphate biosynthesis II
ATY47_09915	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
ATY47_09915	PWY-7234	inosine-5'-phosphate biosynthesis III
ATY47_09955	PWY-5392	reductive TCA cycle II
ATY47_09955	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
ATY47_09955	PWY-5690	TCA cycle II (plants and fungi)
ATY47_09955	PWY-5913	TCA cycle VI (obligate autotrophs)
ATY47_09955	PWY-6728	methylaspartate cycle
ATY47_09955	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ATY47_09955	PWY-7254	TCA cycle VII (acetate-producers)
ATY47_09955	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
ATY47_10005	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
ATY47_10005	PWY-7820	ATY47_10005
ATY47_10045	PWY-2201	folate transformations I
ATY47_10045	PWY-3841	folate transformations II
ATY47_10045	PWY-7977	ATY47_10045
ATY47_10095	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
ATY47_10235	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
ATY47_10335	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
ATY47_10335	PWY-5389	3-methylthiopropanoate biosynthesis
ATY47_10340	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
ATY47_10445	PWY-7942	ATY47_10445
ATY47_10510	PWY-5941	glycogen degradation II (eukaryotic)
ATY47_10510	PWY-6724	starch degradation II
ATY47_10510	PWY-6737	starch degradation V
ATY47_10510	PWY-7238	sucrose biosynthesis II
ATY47_10530	PWY-43	putrescine biosynthesis II
ATY47_10545	PWY-7205	CMP phosphorylation
ATY47_10570	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ATY47_10570	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
ATY47_10570	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ATY47_10580	PWY-3801	sucrose degradation II (sucrose synthase)
ATY47_10580	PWY-6527	stachyose degradation
ATY47_10580	PWY-7238	sucrose biosynthesis II
ATY47_10580	PWY-7343	UDP-glucose biosynthesis
ATY47_10580	PWY-7817	ATY47_10580
ATY47_10620	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
ATY47_10620	PWY-2201	folate transformations I
ATY47_10620	PWY-3841	folate transformations II
ATY47_10620	PWY-5030	L-histidine degradation III
ATY47_10620	PWY-5497	purine nucleobases degradation II (anaerobic)
ATY47_10620	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
ATY47_10620	PWY-7909	ATY47_10620
ATY47_10625	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
ATY47_10625	PWY-6596	adenosine nucleotides degradation I
ATY47_10625	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
ATY47_10630	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
ATY47_10705	PWY-5484	glycolysis II (from fructose 6-phosphate)
ATY47_10705	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ATY47_10720	PWY-6502	oxidized GTP and dGTP detoxification
ATY47_10825	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ATY47_10825	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ATY47_10835	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ATY47_10835	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ATY47_10835	PWY-7953	ATY47_10835
ATY47_10840	PWY-5686	UMP biosynthesis
ATY47_10870	PWY-2941	L-lysine biosynthesis II
ATY47_10870	PWY-2942	L-lysine biosynthesis III
ATY47_10870	PWY-5097	L-lysine biosynthesis VI
ATY47_10870	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
ATY47_10870	PWY-6559	spermidine biosynthesis II
ATY47_10870	PWY-6562	norspermidine biosynthesis
ATY47_10870	PWY-7153	grixazone biosynthesis
ATY47_10870	PWY-7977	ATY47_10870
ATY47_10875	PWY-702	L-methionine biosynthesis II
ATY47_11255	PWY-5269	cardiolipin biosynthesis II
ATY47_11255	PWY-5668	cardiolipin biosynthesis I
ATY47_11255	PWY-7817	ATY47_11255
ATY47_11275	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
ATY47_11335	PWY-3781	aerobic respiration I (cytochrome c)
ATY47_11335	PWY-4302	aerobic respiration III (alternative oxidase pathway)
ATY47_11335	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
ATY47_11335	PWY-5690	TCA cycle II (plants and fungi)
ATY47_11335	PWY-6728	methylaspartate cycle
ATY47_11335	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ATY47_11335	PWY-7254	TCA cycle VII (acetate-producers)
ATY47_11335	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
ATY47_11345	PWY-3781	aerobic respiration I (cytochrome c)
ATY47_11345	PWY-4302	aerobic respiration III (alternative oxidase pathway)
ATY47_11345	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
ATY47_11345	PWY-5690	TCA cycle II (plants and fungi)
ATY47_11345	PWY-6728	methylaspartate cycle
ATY47_11345	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ATY47_11345	PWY-7254	TCA cycle VII (acetate-producers)
ATY47_11345	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
ATY47_11370	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
ATY47_11375	PWY-2722	trehalose degradation IV
ATY47_11375	PWY-2723	trehalose degradation V
ATY47_11375	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
ATY47_11375	PWY-5661	GDP-glucose biosynthesis
ATY47_11375	PWY-621	sucrose degradation III (sucrose invertase)
ATY47_11375	PWY-7238	sucrose biosynthesis II
ATY47_11375	PWY-7385	1,3-propanediol biosynthesis (engineered)
ATY47_11380	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
ATY47_11380	PWY-6855	chitin degradation I (archaea)
ATY47_11380	PWY-6906	chitin derivatives degradation
ATY47_11385	PWY-5101	L-isoleucine biosynthesis II
ATY47_11385	PWY-5103	L-isoleucine biosynthesis III
ATY47_11385	PWY-5104	L-isoleucine biosynthesis IV
ATY47_11385	PWY-7111	pyruvate fermentation to isobutanol (engineered)
ATY47_11390	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
ATY47_11390	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
ATY47_11390	PWY-7242	D-fructuronate degradation
ATY47_11390	PWY-7310	D-glucosaminate degradation
ATY47_11390	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
ATY47_11485	PWY-6803	phosphatidylcholine acyl editing
ATY47_11485	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
ATY47_11485	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
ATY47_11485	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
ATY47_11485	PWY-7783	ATY47_11485
ATY47_11495	PWY-5392	reductive TCA cycle II
ATY47_11495	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
ATY47_11495	PWY-5690	TCA cycle II (plants and fungi)
ATY47_11495	PWY-5913	TCA cycle VI (obligate autotrophs)
ATY47_11495	PWY-6728	methylaspartate cycle
ATY47_11495	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ATY47_11495	PWY-7254	TCA cycle VII (acetate-producers)
ATY47_11495	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
ATY47_11625	PWY-3801	sucrose degradation II (sucrose synthase)
ATY47_11625	PWY-5054	sorbitol biosynthesis I
ATY47_11625	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
ATY47_11625	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
ATY47_11625	PWY-5659	GDP-mannose biosynthesis
ATY47_11625	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ATY47_11625	PWY-621	sucrose degradation III (sucrose invertase)
ATY47_11625	PWY-622	starch biosynthesis
ATY47_11625	PWY-6981	chitin biosynthesis
ATY47_11625	PWY-6992	1,5-anhydrofructose degradation
ATY47_11625	PWY-7238	sucrose biosynthesis II
ATY47_11625	PWY-7347	sucrose biosynthesis III
ATY47_11625	PWY-7385	1,3-propanediol biosynthesis (engineered)
ATY47_11630	PWY-5155	&beta;-alanine biosynthesis III
ATY47_11640	PWY-6654	phosphopantothenate biosynthesis III
ATY47_11645	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
ATY47_11645	PWY-6148	tetrahydromethanopterin biosynthesis
ATY47_11645	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
ATY47_11645	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
ATY47_11645	PWY-7852	ATY47_11645
ATY47_11645	PWY-7853	ATY47_11645
ATY47_11660	PWY-5663	tetrahydrobiopterin biosynthesis I
ATY47_11660	PWY-5664	tetrahydrobiopterin biosynthesis II
ATY47_11660	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
ATY47_11660	PWY-6703	preQ<sub>0</sub> biosynthesis
ATY47_11660	PWY-6983	tetrahydrobiopterin biosynthesis III
ATY47_11660	PWY-7442	drosopterin and aurodrosopterin biosynthesis
ATY47_11660	PWY-7852	ATY47_11660
ATY47_11740	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
ATY47_11745	PWY-3461	L-tyrosine biosynthesis II
ATY47_11745	PWY-3462	L-phenylalanine biosynthesis II
ATY47_11745	PWY-6120	L-tyrosine biosynthesis III
ATY47_11745	PWY-6627	salinosporamide A biosynthesis
ATY47_11745	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
ATY47_11745	PWY-7626	bacilysin biosynthesis
ATY47_11795	PWY-5028	L-histidine degradation II
ATY47_11795	PWY-5030	L-histidine degradation III
ATY47_11800	PWY-5028	L-histidine degradation II
ATY47_11800	PWY-5030	L-histidine degradation III
ATY47_11810	PWY-5028	L-histidine degradation II
ATY47_11810	PWY-5030	L-histidine degradation III
ATY47_11840	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
ATY47_11840	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
ATY47_11925	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
ATY47_11925	PWY-5743	3-hydroxypropanoate cycle
ATY47_11925	PWY-5744	glyoxylate assimilation
ATY47_11925	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
ATY47_11925	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ATY47_11925	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
ATY47_11925	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
ATY47_11930	PWY-5647	2-nitrobenzoate degradation I
ATY47_11930	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
ATY47_11930	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
ATY47_11930	PWY-6505	L-tryptophan degradation XII (Geobacillus)
ATY47_11940	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
ATY47_11940	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
ATY47_11945	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
ATY47_11945	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
ATY47_11945	PWY-7717	ATY47_11945
ATY47_11945	PWY-7765	ATY47_11945
ATY47_11970	PWY-5381	pyridine nucleotide cycling (plants)
ATY47_11970	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
ATY47_11970	PWY-6596	adenosine nucleotides degradation I
ATY47_11970	PWY-6606	guanosine nucleotides degradation II
ATY47_11970	PWY-6607	guanosine nucleotides degradation I
ATY47_11970	PWY-6608	guanosine nucleotides degradation III
ATY47_11970	PWY-7185	UTP and CTP dephosphorylation I
ATY47_11970	PWY-7821	ATY47_11970
ATY47_11975	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
ATY47_11975	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
ATY47_11975	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
ATY47_12060	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
ATY47_12060	PWY-5743	3-hydroxypropanoate cycle
ATY47_12060	PWY-5744	glyoxylate assimilation
ATY47_12060	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
ATY47_12060	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ATY47_12060	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
ATY47_12060	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
ATY47_12190	PWY-6700	queuosine biosynthesis
ATY47_12195	PWY-6700	queuosine biosynthesis
ATY47_12240	PWY-4702	phytate degradation I
ATY47_12255	PWY-7183	pyrimidine nucleobases salvage I
ATY47_12275	PWY-4041	&gamma;-glutamyl cycle
ATY47_12275	PWY-4061	glutathione-mediated detoxification I
ATY47_12275	PWY-5826	hypoglycin biosynthesis
ATY47_12275	PWY-6842	glutathione-mediated detoxification II
ATY47_12275	PWY-7112	4-hydroxy-2-nonenal detoxification
ATY47_12275	PWY-7559	glutathione degradation (DUG pathway - yeast)
ATY47_12295	PWY-7851	ATY47_12295
ATY47_12395	PWY-6823	molybdenum cofactor biosynthesis
ATY47_12430	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
ATY47_12430	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
ATY47_12430	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
ATY47_12430	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
ATY47_12430	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
ATY47_12430	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
ATY47_12430	PWY-7205	CMP phosphorylation
ATY47_12430	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
ATY47_12430	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
ATY47_12430	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
ATY47_12430	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
ATY47_12430	PWY-7224	purine deoxyribonucleosides salvage
ATY47_12430	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
ATY47_12430	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
ATY47_12440	PWY-1361	benzoyl-CoA degradation I (aerobic)
ATY47_12440	PWY-5109	2-methylbutanoate biosynthesis
ATY47_12440	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
ATY47_12440	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
ATY47_12440	PWY-5177	glutaryl-CoA degradation
ATY47_12440	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
ATY47_12440	PWY-6435	4-hydroxybenzoate biosynthesis V
ATY47_12440	PWY-6583	pyruvate fermentation to butanol I
ATY47_12440	PWY-6863	pyruvate fermentation to hexanol
ATY47_12440	PWY-6883	pyruvate fermentation to butanol II
ATY47_12440	PWY-6944	androstenedione degradation
ATY47_12440	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
ATY47_12440	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
ATY47_12440	PWY-7007	methyl ketone biosynthesis
ATY47_12440	PWY-7046	4-coumarate degradation (anaerobic)
ATY47_12440	PWY-7094	fatty acid salvage
ATY47_12440	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
ATY47_12440	PWY-735	jasmonic acid biosynthesis
ATY47_12440	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
ATY47_12440	PWY-7606	docosahexaenoate biosynthesis III (mammals)
ATY47_12440	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
ATY47_12440	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
ATY47_12440	PWY-7726	ATY47_12440
ATY47_12440	PWY-7778	ATY47_12440
ATY47_12440	PWY-7779	ATY47_12440
ATY47_12515	PWY-7801	ATY47_12515
ATY47_12540	PWY-7887	ATY47_12540
ATY47_12540	PWY-7892	ATY47_12540
ATY47_12715	PWY-4381	fatty acid biosynthesis initiation I
ATY47_12775	PWY-7980	ATY47_12775
ATY47_13055	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
ATY47_13075	PWY-3341	L-proline biosynthesis III
ATY47_13075	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
ATY47_13080	PWY-3341	L-proline biosynthesis III
ATY47_13080	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
ATY47_13095	PWY-4983	L-citrulline-nitric oxide cycle
ATY47_13095	PWY-4984	urea cycle
ATY47_13095	PWY-5	canavanine biosynthesis
ATY47_13095	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ATY47_13095	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
ATY47_13100	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ATY47_13100	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
ATY47_13110	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ATY47_13110	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
ATY47_13125	PWY-4983	L-citrulline-nitric oxide cycle
ATY47_13125	PWY-4984	urea cycle
ATY47_13125	PWY-5	canavanine biosynthesis
ATY47_13125	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ATY47_13125	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
ATY47_13130	PWY-5686	UMP biosynthesis
ATY47_13130	PWY-7790	ATY47_13130
ATY47_13130	PWY-7791	ATY47_13130
ATY47_13175	PWY-5686	UMP biosynthesis
ATY47_13175	PWY-7790	ATY47_13175
ATY47_13175	PWY-7791	ATY47_13175
ATY47_13225	PWY-1081	homogalacturonan degradation
ATY47_13225	PWY-7246	pectin degradation II
ATY47_13225	PWY-7248	pectin degradation III
ATY47_13255	PWY-181	photorespiration
ATY47_13260	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
ATY47_13260	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
ATY47_13260	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
ATY47_13260	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
ATY47_13260	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
ATY47_13260	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
ATY47_13260	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
ATY47_13260	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
ATY47_13260	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
ATY47_13260	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
ATY47_13300	PWY-2301	<i>myo</i>-inositol biosynthesis
ATY47_13300	PWY-4702	phytate degradation I
ATY47_13300	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
ATY47_13305	PWY-6854	ethylene biosynthesis III (microbes)
ATY47_13335	PWY-6605	adenine and adenosine salvage II
ATY47_13335	PWY-6610	adenine and adenosine salvage IV
ATY47_13335	PWY-7805	ATY47_13335
ATY47_13335	PWY-7807	ATY47_13335
ATY47_13390	PWY-5676	acetyl-CoA fermentation to butanoate II
ATY47_13390	PWY-5741	ethylmalonyl-CoA pathway
ATY47_13390	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
ATY47_13390	PWY-7948	ATY47_13390
ATY47_13425	PWY-6938	NADH repair
ATY47_13430	PWY-6700	queuosine biosynthesis
ATY47_13560	PWY-3781	aerobic respiration I (cytochrome c)
ATY47_13560	PWY-6692	Fe(II) oxidation
ATY47_13560	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
ATY47_13560	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
ATY47_13670	PWY-381	nitrate reduction II (assimilatory)
ATY47_13670	PWY-5675	nitrate reduction V (assimilatory)
ATY47_13670	PWY-6549	L-glutamine biosynthesis III
ATY47_13670	PWY-6963	ammonia assimilation cycle I
ATY47_13670	PWY-6964	ammonia assimilation cycle II
ATY47_13680	PWY-381	nitrate reduction II (assimilatory)
ATY47_13680	PWY-5675	nitrate reduction V (assimilatory)
ATY47_13680	PWY-6549	L-glutamine biosynthesis III
ATY47_13680	PWY-6963	ammonia assimilation cycle I
ATY47_13680	PWY-6964	ammonia assimilation cycle II
ATY47_13760	PWY-5022	4-aminobutanoate degradation V
ATY47_13760	PWY-6728	methylaspartate cycle
ATY47_13760	PWY-7126	ethylene biosynthesis IV
ATY47_13960	PWY-6854	ethylene biosynthesis III (microbes)
ATY47_14125	PWY-5747	2-methylcitrate cycle II
ATY47_14210	PWY-7805	ATY47_14210
ATY47_14210	PWY-7807	ATY47_14210
ATY47_14225	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ATY47_14225	PWY-5686	UMP biosynthesis
ATY47_14225	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
ATY47_14225	PWY-7790	ATY47_14225
ATY47_14225	PWY-7791	ATY47_14225
ATY47_14235	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ATY47_14235	PWY-5686	UMP biosynthesis
ATY47_14235	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
ATY47_14235	PWY-7790	ATY47_14235
ATY47_14235	PWY-7791	ATY47_14235
ATY47_14240	PWY-2941	L-lysine biosynthesis II
ATY47_14240	PWY-2942	L-lysine biosynthesis III
ATY47_14240	PWY-5097	L-lysine biosynthesis VI
ATY47_14345	PWY-4261	glycerol degradation I
ATY47_14355	PWY-6807	xyloglucan degradation II (exoglucanase)
ATY47_14375	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
ATY47_14375	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
ATY47_14375	PWY-7242	D-fructuronate degradation
ATY47_14375	PWY-7310	D-glucosaminate degradation
ATY47_14375	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
ATY47_14390	PWY-7130	L-glucose degradation
ATY47_14405	PWY-2941	L-lysine biosynthesis II
ATY47_14405	PWY-2942	L-lysine biosynthesis III
ATY47_14405	PWY-5097	L-lysine biosynthesis VI
ATY47_14435	PWY-6910	hydroxymethylpyrimidine salvage
ATY47_14435	PWY-7356	thiamin salvage IV (yeast)
ATY47_14435	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
ATY47_14490	PWY-2681	<i>trans</i>-zeatin biosynthesis
ATY47_14560	PWY-2781	<i>cis</i>-zeatin biosynthesis
ATY47_14565	PWY-6614	tetrahydrofolate biosynthesis
ATY47_14605	PWY-5381	pyridine nucleotide cycling (plants)
ATY47_14605	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
ATY47_14605	PWY-6596	adenosine nucleotides degradation I
ATY47_14605	PWY-6606	guanosine nucleotides degradation II
ATY47_14605	PWY-6607	guanosine nucleotides degradation I
ATY47_14605	PWY-6608	guanosine nucleotides degradation III
ATY47_14605	PWY-7185	UTP and CTP dephosphorylation I
ATY47_14605	PWY-7821	ATY47_14605
ATY47_14620	PWY-7560	methylerythritol phosphate pathway II
ATY47_14625	PWY-7560	methylerythritol phosphate pathway II
ATY47_14635	PWY-1042	glycolysis IV (plant cytosol)
ATY47_14635	PWY-1622	formaldehyde assimilation I (serine pathway)
ATY47_14635	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
ATY47_14635	PWY-5484	glycolysis II (from fructose 6-phosphate)
ATY47_14635	PWY-5723	Rubisco shunt
ATY47_14635	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ATY47_14635	PWY-6886	1-butanol autotrophic biosynthesis
ATY47_14635	PWY-6901	superpathway of glucose and xylose degradation
ATY47_14635	PWY-7003	glycerol degradation to butanol
ATY47_14635	PWY-7124	ethylene biosynthesis V (engineered)
ATY47_14635	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
ATY47_14645	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
ATY47_14645	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
ATY47_14650	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
ATY47_14650	PWY-7177	UTP and CTP dephosphorylation II
ATY47_14650	PWY-7185	UTP and CTP dephosphorylation I
ATY47_14790	PWY-6519	8-amino-7-oxononanoate biosynthesis I
ATY47_14790	PWY-6578	8-amino-7-oxononanoate biosynthesis III
ATY47_14790	PWY-7147	8-amino-7-oxononanoate biosynthesis II
ATY47_14805	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
ATY47_14805	PWY-7688	ATY47_14805
ATY47_15190	PWY-7158	L-phenylalanine degradation V
ATY47_15280	PWY-6012	acyl carrier protein metabolism I
ATY47_15280	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
ATY47_15280	PWY-6289	petrobactin biosynthesis
ATY47_15350	PWY-5194	siroheme biosynthesis
ATY47_15350	PWY-5196	factor 430 biosynthesis
ATY47_15350	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
ATY47_15380	PWY-6823	molybdenum cofactor biosynthesis
ATY47_15745	PWY-6655	xanthan biosynthesis
ATY47_15745	PWY-6658	acetan biosynthesis
ATY47_15875	PWY-6617	adenosine nucleotides degradation III
ATY47_15875	PWY-7569	arginomycin biosynthesis
ATY47_15875	PWY-7570	blasticidin S biosynthesis
ATY47_15900	PWY-6854	ethylene biosynthesis III (microbes)
ATY47_15910	PWY-6123	inosine-5'-phosphate biosynthesis I
ATY47_15910	PWY-7234	inosine-5'-phosphate biosynthesis III
ATY47_15920	PWY-5316	nicotine biosynthesis
ATY47_15920	PWY-5381	pyridine nucleotide cycling (plants)
ATY47_15920	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
ATY47_15920	PWY-7342	superpathway of nicotine biosynthesis
ATY47_16050	PWY-1042	glycolysis IV (plant cytosol)
ATY47_16050	PWY-5484	glycolysis II (from fructose 6-phosphate)
ATY47_16050	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ATY47_16050	PWY-7003	glycerol degradation to butanol
ATY47_16095	PWY-6749	CMP-legionaminate biosynthesis I
ATY47_16100	PWY-4381	fatty acid biosynthesis initiation I
ATY47_16100	PWY-5743	3-hydroxypropanoate cycle
ATY47_16100	PWY-5744	glyoxylate assimilation
ATY47_16100	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
ATY47_16100	PWY-6722	candicidin biosynthesis
ATY47_16145	PWY-2941	L-lysine biosynthesis II
ATY47_16145	PWY-2942	L-lysine biosynthesis III
ATY47_16145	PWY-5097	L-lysine biosynthesis VI
ATY47_16145	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ATY47_16145	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
ATY47_16145	PWY-6559	spermidine biosynthesis II
ATY47_16145	PWY-6562	norspermidine biosynthesis
ATY47_16145	PWY-7153	grixazone biosynthesis
ATY47_16145	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
ATY47_16145	PWY-7977	ATY47_16145
ATY47_16155	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
ATY47_16170	PWY-5669	phosphatidylethanolamine biosynthesis I
ATY47_16305	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
ATY47_16305	PWY-5491	diethylphosphate degradation
ATY47_16405	PWY-5381	pyridine nucleotide cycling (plants)
ATY47_16405	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
ATY47_16405	PWY-7761	ATY47_16405
ATY47_16615	PWY-6891	thiazole biosynthesis II (Bacillus)
ATY47_16615	PWY-6892	thiazole biosynthesis I (E. coli)
ATY47_16735	PWY-5278	sulfite oxidation III
ATY47_16735	PWY-5340	sulfate activation for sulfonation
ATY47_16735	PWY-6683	sulfate reduction III (assimilatory)
ATY47_16735	PWY-6932	selenate reduction
ATY47_16740	PWY-5278	sulfite oxidation III
ATY47_16740	PWY-5340	sulfate activation for sulfonation
ATY47_16740	PWY-6683	sulfate reduction III (assimilatory)
ATY47_16740	PWY-6932	selenate reduction
ATY47_16745	PWY-6683	sulfate reduction III (assimilatory)
ATY47_16750	PWY-6683	sulfate reduction III (assimilatory)
ATY47_16790	PWY-5194	siroheme biosynthesis
ATY47_16790	PWY-5196	factor 430 biosynthesis
ATY47_16790	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
ATY47_16795	PWY-6936	seleno-amino acid biosynthesis
ATY47_16805	PWY-6825	phosphatidylcholine biosynthesis V
ATY47_16815	PWY-1042	glycolysis IV (plant cytosol)
ATY47_16815	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
ATY47_16815	PWY-5484	glycolysis II (from fructose 6-phosphate)
ATY47_16815	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ATY47_16815	PWY-7385	1,3-propanediol biosynthesis (engineered)
ATY47_16820	PWY-1042	glycolysis IV (plant cytosol)
ATY47_16820	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
ATY47_16820	PWY-5484	glycolysis II (from fructose 6-phosphate)
ATY47_16820	PWY-5723	Rubisco shunt
ATY47_16820	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ATY47_16820	PWY-6886	1-butanol autotrophic biosynthesis
ATY47_16820	PWY-6901	superpathway of glucose and xylose degradation
ATY47_16820	PWY-7003	glycerol degradation to butanol
ATY47_16820	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
ATY47_16820	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
ATY47_16830	PWY-1042	glycolysis IV (plant cytosol)
ATY47_16830	PWY-5484	glycolysis II (from fructose 6-phosphate)
ATY47_16830	PWY-6886	1-butanol autotrophic biosynthesis
ATY47_16830	PWY-6901	superpathway of glucose and xylose degradation
ATY47_16830	PWY-7003	glycerol degradation to butanol
ATY47_17245	PWY-6855	chitin degradation I (archaea)
ATY47_17245	PWY-6902	chitin degradation II
ATY47_17245	PWY-7822	ATY47_17245
ATY47_17850	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
ATY47_17870	PWY-7560	methylerythritol phosphate pathway II
ATY47_17885	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
ATY47_17895	PWY-7437	protein <i>O</i>-[<i>N</i>-acetyl]-glucosylation
ATY47_17930	PWY-7731	ATY47_17930
ATY47_17960	PWY-5057	L-valine degradation II
ATY47_17960	PWY-5076	L-leucine degradation III
ATY47_17960	PWY-5078	L-isoleucine degradation II
ATY47_17960	PWY-5101	L-isoleucine biosynthesis II
ATY47_17960	PWY-5103	L-isoleucine biosynthesis III
ATY47_17960	PWY-5104	L-isoleucine biosynthesis IV
ATY47_17960	PWY-5108	L-isoleucine biosynthesis V
ATY47_17960	PWY-7767	ATY47_17960
ATY47_18100	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
ATY47_18100	PWY-5723	Rubisco shunt
ATY47_18125	PWY-2582	brassinosteroid biosynthesis II
ATY47_18125	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
ATY47_18125	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
ATY47_18125	PWY-6948	sitosterol degradation to androstenedione
ATY47_18125	PWY-699	brassinosteroid biosynthesis I
ATY47_18125	PWY-7299	progesterone biosynthesis
ATY47_18210	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
ATY47_18210	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
ATY47_18210	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
ATY47_18210	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
ATY47_18225	PWY-2161	folate polyglutamylation
ATY47_18240	PWY-7782	ATY47_18240
ATY47_18240	PWY-7783	ATY47_18240
ATY47_18250	PWY-7378	aminopropanol phosphate biosynthesis II
ATY47_18430	PWY-5530	sorbitol biosynthesis II
ATY47_18565	PWY-3841	folate transformations II
ATY47_18565	PWY-6614	tetrahydrofolate biosynthesis
ATY47_18575	PWY-3841	folate transformations II
ATY47_18575	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
ATY47_18575	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
ATY47_18575	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
ATY47_18575	PWY-7199	pyrimidine deoxyribonucleosides salvage
ATY47_18575	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
ATY47_18600	PWY-7039	phosphatidate metabolism, as a signaling molecule
ATY47_18600	PWY-7817	ATY47_18600
ATY47_18715	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
ATY47_18715	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
ATY47_18750	PWY-1622	formaldehyde assimilation I (serine pathway)
ATY47_18750	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
ATY47_18750	PWY-5913	TCA cycle VI (obligate autotrophs)
ATY47_18750	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ATY47_18750	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
ATY47_18750	PWY-6549	L-glutamine biosynthesis III
ATY47_18750	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
ATY47_18750	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
ATY47_18750	PWY-7124	ethylene biosynthesis V (engineered)
ATY47_18760	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
ATY47_18820	PWY-6807	xyloglucan degradation II (exoglucanase)
ATY47_18825	PWY-2201	folate transformations I
ATY47_18825	PWY-3841	folate transformations II
ATY47_18835	PWY-6502	oxidized GTP and dGTP detoxification
ATY47_18835	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
ATY47_18835	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
ATY47_18835	PWY-6897	thiamin salvage II
ATY47_18835	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
ATY47_18835	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
ATY47_18835	PWY-7356	thiamin salvage IV (yeast)
ATY47_18835	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
ATY47_18880	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ATY47_18880	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ATY47_18880	PWY-7953	ATY47_18880
ATY47_18885	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ATY47_18885	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ATY47_18885	PWY-7953	ATY47_18885
ATY47_18890	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ATY47_18890	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
ATY47_18890	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
ATY47_18890	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ATY47_18895	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ATY47_18895	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
ATY47_18895	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
ATY47_18895	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ATY47_18900	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ATY47_18900	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
ATY47_18900	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ATY47_18905	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ATY47_18905	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ATY47_18905	PWY-7953	ATY47_18905
ATY47_18915	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ATY47_18915	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ATY47_19015	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
ATY47_19015	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
ATY47_19015	PWY-6896	thiamin salvage I
ATY47_19015	PWY-6897	thiamin salvage II
ATY47_19025	PWY-6167	flavin biosynthesis II (archaea)
ATY47_19025	PWY-6168	flavin biosynthesis III (fungi)
ATY47_19030	PWY-6167	flavin biosynthesis II (archaea)
ATY47_19030	PWY-6168	flavin biosynthesis III (fungi)
ATY47_19030	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
ATY47_19030	PWY-7991	ATY47_19030
ATY47_19035	PWY-6167	flavin biosynthesis II (archaea)
ATY47_19035	PWY-6168	flavin biosynthesis III (fungi)
ATY47_19035	PWY-7980	ATY47_19035
ATY47_19045	PWY-7991	ATY47_19045
ATY47_19065	PWY-1622	formaldehyde assimilation I (serine pathway)
ATY47_19065	PWY-181	photorespiration
ATY47_19065	PWY-2161	folate polyglutamylation
ATY47_19065	PWY-2201	folate transformations I
ATY47_19065	PWY-3661	glycine betaine degradation I
ATY47_19065	PWY-3661-1	glycine betaine degradation II (mammalian)
ATY47_19065	PWY-3841	folate transformations II
ATY47_19065	PWY-5497	purine nucleobases degradation II (anaerobic)
ATY47_19105	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
ATY47_19115	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
ATY47_19115	PWY-3162	L-tryptophan degradation V (side chain pathway)
ATY47_19115	PWY-5057	L-valine degradation II
ATY47_19115	PWY-5076	L-leucine degradation III
ATY47_19115	PWY-5078	L-isoleucine degradation II
ATY47_19115	PWY-5079	L-phenylalanine degradation III
ATY47_19115	PWY-5082	L-methionine degradation III
ATY47_19115	PWY-5480	pyruvate fermentation to ethanol I
ATY47_19115	PWY-5486	pyruvate fermentation to ethanol II
ATY47_19115	PWY-5751	phenylethanol biosynthesis
ATY47_19115	PWY-6313	serotonin degradation
ATY47_19115	PWY-6333	acetaldehyde biosynthesis I
ATY47_19115	PWY-6342	noradrenaline and adrenaline degradation
ATY47_19115	PWY-6587	pyruvate fermentation to ethanol III
ATY47_19115	PWY-6802	salidroside biosynthesis
ATY47_19115	PWY-6871	3-methylbutanol biosynthesis
ATY47_19115	PWY-7013	L-1,2-propanediol degradation
ATY47_19115	PWY-7111	pyruvate fermentation to isobutanol (engineered)
ATY47_19115	PWY-7118	chitin degradation to ethanol
ATY47_19115	PWY-7396	butanol and isobutanol biosynthesis (engineered)
ATY47_19115	PWY-7798	ATY47_19115
ATY47_19165	PWY-6840	homoglutathione biosynthesis
ATY47_19165	PWY-7255	ergothioneine biosynthesis I (bacteria)
ATY47_19335	PWY-6906	chitin derivatives degradation
ATY47_19335	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
ATY47_19335	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
ATY47_19370	PWY-6807	xyloglucan degradation II (exoglucanase)
ATY47_19405	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
ATY47_19405	PWY-6148	tetrahydromethanopterin biosynthesis
ATY47_19405	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
ATY47_19405	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
ATY47_19405	PWY-7852	ATY47_19405
ATY47_19405	PWY-7853	ATY47_19405
ATY47_19470	PWY-5381	pyridine nucleotide cycling (plants)
ATY47_19490	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
ATY47_19490	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
ATY47_19495	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
ATY47_19495	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
ATY47_19510	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ATY47_19510	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ATY47_19560	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ATY47_19560	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
ATY47_19560	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
ATY47_19560	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ATY47_19565	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ATY47_19565	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ATY47_19630	PWY-5839	menaquinol-7 biosynthesis
ATY47_19630	PWY-5844	menaquinol-9 biosynthesis
ATY47_19630	PWY-5849	menaquinol-6 biosynthesis
ATY47_19630	PWY-5890	menaquinol-10 biosynthesis
ATY47_19630	PWY-5891	menaquinol-11 biosynthesis
ATY47_19630	PWY-5892	menaquinol-12 biosynthesis
ATY47_19630	PWY-5895	menaquinol-13 biosynthesis
ATY47_19730	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
ATY47_19730	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
ATY47_19880	PWY-7892	ATY47_19880
ATY47_19960	PWY-5958	acridone alkaloid biosynthesis
ATY47_19960	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
ATY47_19960	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
ATY47_19975	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
ATY47_19975	PWY-5723	Rubisco shunt
ATY47_20165	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
ATY47_20165	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
ATY47_20225	PWY-6454	vancomycin resistance I
ATY47_20225	PWY-6455	vancomycin resistance II
ATY47_20355	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
ATY47_20355	PWY-6148	tetrahydromethanopterin biosynthesis
ATY47_20355	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
ATY47_20355	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
ATY47_20440	PWY-3781	aerobic respiration I (cytochrome c)
ATY47_20440	PWY-4521	arsenite oxidation I (respiratory)
ATY47_20440	PWY-6692	Fe(II) oxidation
ATY47_20440	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
ATY47_20455	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
ATY47_20455	PWY-6853	ethylene biosynthesis II (microbes)
ATY47_20455	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
ATY47_20520	PWY-6834	spermidine biosynthesis III
ATY47_20555	PWY-5958	acridone alkaloid biosynthesis
ATY47_20555	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
ATY47_20555	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
ATY47_20580	PWY-5913	TCA cycle VI (obligate autotrophs)
ATY47_20580	PWY-6549	L-glutamine biosynthesis III
ATY47_20580	PWY-6728	methylaspartate cycle
ATY47_20580	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ATY47_20580	PWY-7124	ethylene biosynthesis V (engineered)
ATY47_20580	PWY-7254	TCA cycle VII (acetate-producers)
ATY47_20580	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
ATY47_20640	PWY-6700	queuosine biosynthesis
ATY47_20710	PWY-5667	CDP-diacylglycerol biosynthesis I
ATY47_20710	PWY-5981	CDP-diacylglycerol biosynthesis III
ATY47_20710	PWY-7902	ATY47_20710
ATY47_20765	PWY-4381	fatty acid biosynthesis initiation I
ATY47_20860	PWY-5101	L-isoleucine biosynthesis II
ATY47_20860	PWY-5103	L-isoleucine biosynthesis III
ATY47_20860	PWY-5104	L-isoleucine biosynthesis IV
ATY47_20860	PWY-7111	pyruvate fermentation to isobutanol (engineered)
ATY47_20895	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
ATY47_20935	PWY-6891	thiazole biosynthesis II (Bacillus)
ATY47_20935	PWY-6892	thiazole biosynthesis I (E. coli)
ATY47_20935	PWY-7560	methylerythritol phosphate pathway II
ATY47_21105	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
ATY47_21105	PWY-6164	3-dehydroquinate biosynthesis I
ATY47_21105	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
ATY47_21205	PWY-7980	ATY47_21205
ATY47_21260	PWY-5971	palmitate biosynthesis II (bacteria and plants)
ATY47_21260	PWY-5973	<i>cis</i>-vaccenate biosynthesis
ATY47_21260	PWY-5989	stearate biosynthesis II (bacteria and plants)
ATY47_21260	PWY-5994	palmitate biosynthesis I (animals and fungi)
ATY47_21260	PWY-6113	superpathway of mycolate biosynthesis
ATY47_21260	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
ATY47_21260	PWY-6519	8-amino-7-oxononanoate biosynthesis I
ATY47_21260	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
ATY47_21260	PWY-7663	gondoate biosynthesis (anaerobic)
ATY47_21260	PWY-7664	oleate biosynthesis IV (anaerobic)
ATY47_21260	PWY-7858	ATY47_21260
ATY47_21260	PWYG-321	mycolate biosynthesis
ATY47_21265	PWY-5667	CDP-diacylglycerol biosynthesis I
ATY47_21265	PWY-5981	CDP-diacylglycerol biosynthesis III
ATY47_21265	PWY-6453	stigma estolide biosynthesis
ATY47_21265	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
ATY47_21265	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
ATY47_21265	PWY-7587	oleate biosynthesis III (cyanobacteria)
ATY47_21265	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
ATY47_21265	PWY-7782	ATY47_21265
ATY47_21290	PWY-5381	pyridine nucleotide cycling (plants)
ATY47_21290	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
ATY47_21290	PWY-6596	adenosine nucleotides degradation I
ATY47_21290	PWY-6606	guanosine nucleotides degradation II
ATY47_21290	PWY-6607	guanosine nucleotides degradation I
ATY47_21290	PWY-6608	guanosine nucleotides degradation III
ATY47_21290	PWY-7185	UTP and CTP dephosphorylation I
ATY47_21290	PWY-7821	ATY47_21290
ATY47_21325	PWY-6825	phosphatidylcholine biosynthesis V
ATY47_21350	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
ATY47_21350	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
ATY47_21350	PWY-6936	seleno-amino acid biosynthesis
ATY47_21350	PWY-702	L-methionine biosynthesis II
ATY47_21370	PWY-6700	queuosine biosynthesis
ATY47_21375	PWY-2201	folate transformations I
ATY47_21375	PWY-3841	folate transformations II
ATY47_21395	PWY-2201	folate transformations I
ATY47_21395	PWY-5497	purine nucleobases degradation II (anaerobic)
ATY47_21395	PWY-7909	ATY47_21395
ATY47_21490	PWY-6832	2-aminoethylphosphonate degradation II
ATY47_21505	PWY-5691	urate degradation to allantoin I
ATY47_21505	PWY-7394	urate degradation to allantoin II
ATY47_21505	PWY-7849	ATY47_21505
ATY47_21565	PWY-4381	fatty acid biosynthesis initiation I
ATY47_21565	PWY-5743	3-hydroxypropanoate cycle
ATY47_21565	PWY-5744	glyoxylate assimilation
ATY47_21565	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
ATY47_21565	PWY-6722	candicidin biosynthesis
ATY47_21775	PWY-6807	xyloglucan degradation II (exoglucanase)
ATY47_21795	PWY-6531	mannitol cycle
ATY47_21815	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
ATY47_21815	PWY-7248	pectin degradation III
ATY47_21820	PWY-6717	(1,4)-&beta;-xylan degradation
ATY47_21820	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
ATY47_21825	PWY-6717	(1,4)-&beta;-xylan degradation
ATY47_21825	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
ATY47_22075	PWY-6854	ethylene biosynthesis III (microbes)
ATY47_22080	PWY-6854	ethylene biosynthesis III (microbes)
ATY47_22105	PWY-381	nitrate reduction II (assimilatory)
ATY47_22105	PWY-5675	nitrate reduction V (assimilatory)
ATY47_22105	PWY-6549	L-glutamine biosynthesis III
ATY47_22105	PWY-6963	ammonia assimilation cycle I
ATY47_22105	PWY-6964	ammonia assimilation cycle II
ATY47_22110	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
ATY47_22200	PWY-7255	ergothioneine biosynthesis I (bacteria)
ATY47_22200	PWY-7550	ergothioneine biosynthesis II (fungi)
ATY47_22205	PWY-7255	ergothioneine biosynthesis I (bacteria)
ATY47_22385	PWY-5108	L-isoleucine biosynthesis V
ATY47_22385	PWY-5132	humulone biosynthesis
ATY47_22385	PWY-5133	cohumulone biosynthesis
ATY47_22385	PWY-6672	<i>cis</i>-genanyl-CoA degradation
ATY47_22385	PWY-7118	chitin degradation to ethanol
ATY47_22385	PWY-7857	ATY47_22385
ATY47_22420	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
ATY47_22430	PWY-6012	acyl carrier protein metabolism I
ATY47_22430	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
ATY47_22430	PWY-6289	petrobactin biosynthesis
ATY47_22490	PWY-7701	ATY47_22490
ATY47_22670	PWY-5663	tetrahydrobiopterin biosynthesis I
ATY47_22670	PWY-5664	tetrahydrobiopterin biosynthesis II
ATY47_22670	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
ATY47_22670	PWY-6703	preQ<sub>0</sub> biosynthesis
ATY47_22670	PWY-6983	tetrahydrobiopterin biosynthesis III
ATY47_22670	PWY-7442	drosopterin and aurodrosopterin biosynthesis
ATY47_22670	PWY-7852	ATY47_22670
ATY47_22815	PWY-6348	phosphate acquisition
