ATY47_00005 SM00382 ATPases associated with a variety of cellular activities ATY47_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain ATY47_00010 SM00480 DNA polymerase III beta subunit ATY47_00020 SM00387 Histidine kinase-like ATPases ATY47_00020 SM00433 TopoisomeraseII ATY47_00035 SM00028 Tetratricopeptide repeats ATY47_00070 SM00155 Phospholipase D. Active site motifs. ATY47_00150 SM00382 ATPases associated with a variety of cellular activities ATY47_00175 SM01126 ATY47_00175 ATY47_00200 SM00487 DEAD-like helicases superfamily ATY47_00200 SM00490 helicase superfamily c-terminal domain ATY47_00270 SM01126 ATY47_00270 ATY47_00295 SM00642 Alpha-amylase domain ATY47_00305 SM00642 Alpha-amylase domain ATY47_00315 SM00642 Alpha-amylase domain ATY47_00320 SM00642 Alpha-amylase domain ATY47_00330 SM00267 diguanylate cyclase ATY47_00415 SM00382 ATPases associated with a variety of cellular activities ATY47_00520 SM00369 Leucine-rich repeats, typical (most populated) subfamily ATY47_00540 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY47_00635 SM00382 ATPases associated with a variety of cellular activities ATY47_00655 SM01126 ATY47_00655 ATY47_00680 SM00487 DEAD-like helicases superfamily ATY47_00680 SM00490 helicase superfamily c-terminal domain ATY47_00755 SM01126 ATY47_00755 ATY47_00810 SM00354 helix_turn _helix lactose operon repressor ATY47_00830 SM00642 Alpha-amylase domain ATY47_00835 SM00642 Alpha-amylase domain ATY47_00840 SM00642 Alpha-amylase domain ATY47_00890 SM00382 ATPases associated with a variety of cellular activities ATY47_00900 SM00938 Nitrogen regulatory protein P-II ATY47_00980 SM01228 ATY47_00980 ATY47_01045 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY47_01045 SM00388 His Kinase A (phosphoacceptor) domain ATY47_01080 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family ATY47_01100 SM00354 helix_turn _helix lactose operon repressor ATY47_01110 SM00563 Phosphate acyltransferases ATY47_01160 SM00344 helix_turn_helix ASNC type ATY47_01215 SM00829 Enoylreductase ATY47_01275 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY47_01275 SM00091 PAS domain ATY47_01330 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain ATY47_01330 SM01232 ATY47_01330 ATY47_01335 SM01126 ATY47_01335 ATY47_01385 SM00382 ATPases associated with a variety of cellular activities ATY47_01400 SM01126 ATY47_01400 ATY47_01470 SM00564 beta-propeller repeat ATY47_01510 SM00091 PAS domain ATY47_01510 SM00387 Histidine kinase-like ATPases ATY47_01510 SM00388 His Kinase A (phosphoacceptor) domain ATY47_01510 SM00448 cheY-homologous receiver domain ATY47_01520 SM00346 helix_turn_helix isocitrate lyase regulation ATY47_01540 SM01126 ATY47_01540 ATY47_01565 SM00563 Phosphate acyltransferases ATY47_01660 SM01126 ATY47_01660 ATY47_01700 SM00382 ATPases associated with a variety of cellular activities ATY47_01725 SM00530 Helix-turn-helix XRE-family like proteins ATY47_01735 SM00382 ATPases associated with a variety of cellular activities ATY47_01755 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. ATY47_01795 SM01004 Delta-aminolevulinic acid dehydratase ATY47_01810 SM00477 DNA/RNA non-specific endonuclease ATY47_01810 SM00892 DNA/RNA non-specific endonuclease ATY47_01835 SM00491 ATY47_01835 ATY47_01845 SM01126 ATY47_01845 ATY47_01860 SM01060 ATY47_01860 ATY47_01865 SM00248 ankyrin repeats ATY47_01890 SM00448 cheY-homologous receiver domain ATY47_01890 SM00862 Transcriptional regulatory protein, C terminal ATY47_01895 SM00387 Histidine kinase-like ATPases ATY47_01895 SM00388 His Kinase A (phosphoacceptor) domain ATY47_01985 SM00849 Metallo-beta-lactamase superfamily ATY47_02030 SM01060 ATY47_02030 ATY47_02075 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY47_02075 SM00876 Biotin and Thiamin Synthesis associated domain ATY47_02090 SM00822 ATY47_02090 ATY47_02115 SM00825 Beta-ketoacyl synthase ATY47_02125 SM00248 ankyrin repeats ATY47_02130 SM00226 Low molecular weight phosphatase family ATY47_02155 SM00116 Domain in cystathionine beta-synthase and other proteins. ATY47_02155 SM00924 MgtE intracellular N domain ATY47_02165 SM00881 CoA binding domain ATY47_02230 SM00998 Adenylosuccinate lyase C-terminus ATY47_02250 SM00346 helix_turn_helix isocitrate lyase regulation ATY47_02255 SM00090 RIO-like kinase ATY47_02280 SM00836 DALR anticodon binding domain ATY47_02280 SM01016 Arginyl tRNA synthetase N terminal dom ATY47_02310 SM01259 ATY47_02310 ATY47_02330 SM00470 ParB-like nuclease domain ATY47_02415 SM00073 Histidine Phosphotransfer domain ATY47_02415 SM00387 Histidine kinase-like ATPases ATY47_02415 SM00388 His Kinase A (phosphoacceptor) domain ATY47_02415 SM00448 cheY-homologous receiver domain ATY47_02420 SM00052 Putative diguanylate phosphodiesterase ATY47_02420 SM00267 diguanylate cyclase ATY47_02420 SM00448 cheY-homologous receiver domain ATY47_02490 SM00563 Phosphate acyltransferases ATY47_02520 SM01209 ATY47_02520 ATY47_02520 SM01210 ATY47_02520 ATY47_02530 SM00798 AICARFT/IMPCHase bienzyme ATY47_02530 SM00851 MGS-like domain ATY47_02560 SM01126 ATY47_02560 ATY47_02575 SM00530 Helix-turn-helix XRE-family like proteins ATY47_02600 SM00878 Biotin carboxylase C-terminal domain ATY47_02635 SM01126 ATY47_02635 ATY47_02650 SM00487 DEAD-like helicases superfamily ATY47_02650 SM00490 helicase superfamily c-terminal domain ATY47_02710 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain ATY47_02710 SM00437 Bacterial DNA topoisomerase I DNA-binding domain ATY47_02710 SM00493 ATY47_02710 ATY47_02735 SM00257 Lysin motif ATY47_02935 SM01126 ATY47_02935 ATY47_02950 SM00382 ATPases associated with a variety of cellular activities ATY47_03025 SM00382 ATPases associated with a variety of cellular activities ATY47_03025 SM00448 cheY-homologous receiver domain ATY47_03035 SM00448 cheY-homologous receiver domain ATY47_03040 SM00138 Methyltransferase, chemotaxis proteins ATY47_03060 SM00387 Histidine kinase-like ATPases ATY47_03065 SM00448 cheY-homologous receiver domain ATY47_03070 SM00850 LytTr DNA-binding domain ATY47_03135 SM00986 Uracil DNA glycosylase superfamily ATY47_03135 SM00987 UreE urease accessory protein, C-terminal domain ATY47_03140 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. ATY47_03160 SM00382 ATPases associated with a variety of cellular activities ATY47_03195 SM00387 Histidine kinase-like ATPases ATY47_03195 SM00388 His Kinase A (phosphoacceptor) domain ATY47_03200 SM00448 cheY-homologous receiver domain ATY47_03200 SM00862 Transcriptional regulatory protein, C terminal ATY47_03240 SM00344 helix_turn_helix ASNC type ATY47_03250 SM01005 Alanine racemase, C-terminal domain ATY47_03270 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY47_03270 SM00091 PAS domain ATY47_03270 SM00387 Histidine kinase-like ATPases ATY47_03270 SM00388 His Kinase A (phosphoacceptor) domain ATY47_03270 SM00448 cheY-homologous receiver domain ATY47_03345 SM00382 ATPases associated with a variety of cellular activities ATY47_03345 SM00930 ATY47_03345 ATY47_03370 SM00986 Uracil DNA glycosylase superfamily ATY47_03370 SM00987 UreE urease accessory protein, C-terminal domain ATY47_03440 SM00382 ATPases associated with a variety of cellular activities ATY47_03450 SM00830 Chorismate mutase type II ATY47_03475 SM01126 ATY47_03475 ATY47_03570 SM00825 Beta-ketoacyl synthase ATY47_03595 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY47_03620 SM00487 DEAD-like helicases superfamily ATY47_03620 SM00490 helicase superfamily c-terminal domain ATY47_03655 SM00116 Domain in cystathionine beta-synthase and other proteins. ATY47_03705 SM00382 ATPases associated with a variety of cellular activities ATY47_03715 SM00893 Electron transfer flavoprotein domain ATY47_03720 SM00893 Electron transfer flavoprotein domain ATY47_03755 SM00882 Coenzyme A transferase ATY47_03760 SM00882 Coenzyme A transferase ATY47_03790 SM00382 ATPases associated with a variety of cellular activities ATY47_03805 SM00528 Domain in histone-like proteins of HNS family ATY47_03860 SM00656 ATY47_03860 ATY47_03945 SM01211 ATY47_03945 ATY47_03970 SM00382 ATPases associated with a variety of cellular activities ATY47_04035 SM00345 helix_turn_helix gluconate operon transcriptional repressor ATY47_04035 SM00866 ATY47_04035 ATY47_04100 SM00487 DEAD-like helicases superfamily ATY47_04105 SM01126 ATY47_04105 ATY47_04135 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ATY47_04140 SM00822 ATY47_04140 ATY47_04150 SM00825 Beta-ketoacyl synthase ATY47_04200 SM00382 ATPases associated with a variety of cellular activities ATY47_04285 SM00271 DnaJ molecular chaperone homology domain ATY47_04290 SM00448 cheY-homologous receiver domain ATY47_04295 SM00244 prohibitin homologues ATY47_04300 SM00244 prohibitin homologues ATY47_04310 SM00788 Adenylosuccinate synthetase ATY47_04420 SM01329 ATY47_04420 ATY47_04425 SM00917 LeuA allosteric (dimerisation) domain ATY47_04455 SM00862 Transcriptional regulatory protein, C terminal ATY47_04460 SM00342 helix_turn_helix, arabinose operon control protein ATY47_04490 SM01126 ATY47_04490 ATY47_04500 SM01126 ATY47_04500 ATY47_04520 SM00464 Found in ATP-dependent protease La (LON) ATY47_04555 SM00838 Elongation factor G C-terminus ATY47_04635 SM01126 ATY47_04635 ATY47_04690 SM01126 ATY47_04690 ATY47_04775 SM01126 ATY47_04775 ATY47_04780 SM01329 ATY47_04780 ATY47_04845 SM00382 ATPases associated with a variety of cellular activities ATY47_04845 SM00994 ClpX C4-type zinc finger ATY47_04845 SM01086 C-terminal, D2-small domain, of ClpB protein ATY47_04850 SM00382 ATPases associated with a variety of cellular activities ATY47_04850 SM00464 Found in ATP-dependent protease La (LON) ATY47_04855 SM00411 bacterial (prokaryotic) histone like domain ATY47_04880 SM00257 Lysin motif ATY47_04885 SM00849 Metallo-beta-lactamase superfamily ATY47_04900 SM00479 ATY47_04900 ATY47_04905 SM00331 Sigma factor PP2C-like phosphatases ATY47_04905 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ATY47_04985 SM01126 ATY47_04985 ATY47_05010 SM00849 Metallo-beta-lactamase superfamily ATY47_05015 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY47_05045 SM00382 ATPases associated with a variety of cellular activities ATY47_05055 SM00493 ATY47_05055 ATY47_05070 SM00460 Transglutaminase/protease-like homologues ATY47_05080 SM00382 ATPases associated with a variety of cellular activities ATY47_05155 SM00450 Rhodanese Homology Domain ATY47_05185 SM01154 ATY47_05185 ATY47_05195 SM00642 Alpha-amylase domain ATY47_05210 SM00354 helix_turn _helix lactose operon repressor ATY47_05215 SM00822 ATY47_05215 ATY47_05230 SM00448 cheY-homologous receiver domain ATY47_05230 SM00862 Transcriptional regulatory protein, C terminal ATY47_05235 SM00387 Histidine kinase-like ATPases ATY47_05235 SM00388 His Kinase A (phosphoacceptor) domain ATY47_05245 SM00421 helix_turn_helix, Lux Regulon ATY47_05245 SM00448 cheY-homologous receiver domain ATY47_05285 SM00387 Histidine kinase-like ATPases ATY47_05285 SM00388 His Kinase A (phosphoacceptor) domain ATY47_05285 SM00448 cheY-homologous receiver domain ATY47_05300 SM00919 Malic enzyme, NAD binding domain ATY47_05300 SM01274 ATY47_05300 ATY47_05390 SM01011 Aminopeptidase P, N-terminal domain ATY47_05425 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY47_05450 SM00072 Guanylate kinase homologues. ATY47_05460 SM01409 ATY47_05460 ATY47_05465 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY47_05465 SM00954 Region found in RelA / SpoT proteins ATY47_05475 SM00487 DEAD-like helicases superfamily ATY47_05475 SM00490 helicase superfamily c-terminal domain ATY47_05530 SM00965 Secretin and TonB N terminus short domain ATY47_05565 SM00327 von Willebrand factor (vWF) type A domain ATY47_05570 SM00028 Tetratricopeptide repeats ATY47_05570 SM00327 von Willebrand factor (vWF) type A domain ATY47_05590 SM00861 Transketolase, pyrimidine binding domain ATY47_05650 SM00448 cheY-homologous receiver domain ATY47_05650 SM00862 Transcriptional regulatory protein, C terminal ATY47_05655 SM00387 Histidine kinase-like ATPases ATY47_05655 SM00388 His Kinase A (phosphoacceptor) domain ATY47_05675 SM00382 ATPases associated with a variety of cellular activities ATY47_05690 SM00849 Metallo-beta-lactamase superfamily ATY47_05725 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ATY47_05740 SM01126 ATY47_05740 ATY47_05745 SM00387 Histidine kinase-like ATPases ATY47_05745 SM00388 His Kinase A (phosphoacceptor) domain ATY47_05750 SM00448 cheY-homologous receiver domain ATY47_05750 SM00862 Transcriptional regulatory protein, C terminal ATY47_06045 SM00422 helix_turn_helix, mercury resistance ATY47_06070 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. ATY47_06080 SM00849 Metallo-beta-lactamase superfamily ATY47_06105 SM00421 helix_turn_helix, Lux Regulon ATY47_06140 SM00924 MgtE intracellular N domain ATY47_06185 SM00382 ATPases associated with a variety of cellular activities ATY47_06205 SM00116 Domain in cystathionine beta-synthase and other proteins. ATY47_06345 SM00813 Alpha-L-arabinofuranosidase C-terminus ATY47_06365 SM00382 ATPases associated with a variety of cellular activities ATY47_06365 SM00962 SRP54-type protein, GTPase domain ATY47_06365 SM00963 SRP54-type protein, helical bundle domain ATY47_06410 SM00363 S4 RNA-binding domain ATY47_06435 SM00382 ATPases associated with a variety of cellular activities ATY47_06435 SM01086 C-terminal, D2-small domain, of ClpB protein ATY47_06505 SM00855 Phosphoglycerate mutase family ATY47_06585 SM00382 ATPases associated with a variety of cellular activities ATY47_06630 SM00862 Transcriptional regulatory protein, C terminal ATY47_06635 SM00342 helix_turn_helix, arabinose operon control protein ATY47_06695 SM01126 ATY47_06695 ATY47_06735 SM00382 ATPases associated with a variety of cellular activities ATY47_06750 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain ATY47_06785 SM00411 bacterial (prokaryotic) histone like domain ATY47_06805 SM00382 ATPases associated with a variety of cellular activities ATY47_06845 SM00732 Likely ribonuclease with RNase H fold. ATY47_06920 SM00267 diguanylate cyclase ATY47_06925 SM00829 Enoylreductase ATY47_06940 SM01126 ATY47_06940 ATY47_07050 SM00855 Phosphoglycerate mutase family ATY47_07070 SM00448 cheY-homologous receiver domain ATY47_07075 SM00138 Methyltransferase, chemotaxis proteins ATY47_07080 SM00052 Putative diguanylate phosphodiesterase ATY47_07080 SM00448 cheY-homologous receiver domain ATY47_07085 SM00260 Two component signalling adaptor domain ATY47_07090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY47_07090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY47_07095 SM00073 Histidine Phosphotransfer domain ATY47_07095 SM00260 Two component signalling adaptor domain ATY47_07095 SM00387 Histidine kinase-like ATPases ATY47_07095 SM01231 ATY47_07095 ATY47_07105 SM00487 DEAD-like helicases superfamily ATY47_07105 SM00490 helicase superfamily c-terminal domain ATY47_07105 SM00982 ATY47_07105 ATY47_07105 SM01058 CarD-like/TRCF domain ATY47_07125 SM00387 Histidine kinase-like ATPases ATY47_07125 SM00388 His Kinase A (phosphoacceptor) domain ATY47_07140 SM00645 Papain family cysteine protease ATY47_07160 SM00645 Papain family cysteine protease ATY47_07175 SM00645 Papain family cysteine protease ATY47_07235 SM00357 Cold shock protein domain ATY47_07365 SM00829 Enoylreductase ATY47_07385 SM00342 helix_turn_helix, arabinose operon control protein ATY47_07385 SM00478 endonuclease III ATY47_07385 SM01009 AlkA N-terminal domain ATY47_07435 SM00487 DEAD-like helicases superfamily ATY47_07435 SM00490 helicase superfamily c-terminal domain ATY47_07440 SM00052 Putative diguanylate phosphodiesterase ATY47_07440 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY47_07440 SM00091 PAS domain ATY47_07440 SM00267 diguanylate cyclase ATY47_07445 SM00363 S4 RNA-binding domain ATY47_07475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY47_07475 SM00387 Histidine kinase-like ATPases ATY47_07475 SM00388 His Kinase A (phosphoacceptor) domain ATY47_07480 SM00448 cheY-homologous receiver domain ATY47_07480 SM00862 Transcriptional regulatory protein, C terminal ATY47_07510 SM00382 ATPases associated with a variety of cellular activities ATY47_07615 SM00382 ATPases associated with a variety of cellular activities ATY47_07615 SM00448 cheY-homologous receiver domain ATY47_07620 SM00387 Histidine kinase-like ATPases ATY47_07620 SM00388 His Kinase A (phosphoacceptor) domain ATY47_07630 SM00881 CoA binding domain ATY47_07790 SM00904 Riboflavin kinase ATY47_07835 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY47_07885 SM00533 DNA-binding domain of DNA mismatch repair MUTS family ATY47_07885 SM00534 ATPase domain of DNA mismatch repair MUTS family ATY47_07910 SM00382 ATPases associated with a variety of cellular activities ATY47_07950 SM00834 Putative regulatory protein ATY47_07985 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ATY47_07995 SM00382 ATPases associated with a variety of cellular activities ATY47_08170 SM00530 Helix-turn-helix XRE-family like proteins ATY47_08340 SM00448 cheY-homologous receiver domain ATY47_08350 SM00341 Helicase and RNase D C-terminal ATY47_08350 SM00487 DEAD-like helicases superfamily ATY47_08350 SM00490 helicase superfamily c-terminal domain ATY47_08350 SM00956 ATY47_08350 ATY47_08360 SM00382 ATPases associated with a variety of cellular activities ATY47_08360 SM00487 DEAD-like helicases superfamily ATY47_08360 SM00490 helicase superfamily c-terminal domain ATY47_08360 SM00847 Helicase associated domain (HA2) Add an annotation ATY47_08425 SM00954 Region found in RelA / SpoT proteins ATY47_08450 SM00491 ATY47_08450 ATY47_08475 SM00448 cheY-homologous receiver domain ATY47_08480 SM00448 cheY-homologous receiver domain ATY47_08485 SM00260 Two component signalling adaptor domain ATY47_08490 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY47_08495 SM00073 Histidine Phosphotransfer domain ATY47_08495 SM00260 Two component signalling adaptor domain ATY47_08495 SM00387 Histidine kinase-like ATPases ATY47_08495 SM00448 cheY-homologous receiver domain ATY47_08495 SM01231 ATY47_08495 ATY47_08505 SM00260 Two component signalling adaptor domain ATY47_08525 SM00327 von Willebrand factor (vWF) type A domain ATY47_08550 SM00369 Leucine-rich repeats, typical (most populated) subfamily ATY47_08600 SM01149 ATY47_08600 ATY47_08645 SM00382 ATPases associated with a variety of cellular activities ATY47_08650 SM00758 ATY47_08650 ATY47_08650 SM01217 ATY47_08650 ATY47_08665 SM00636 ATY47_08665 ATY47_08670 SM00812 Alpha-L-fucosidase ATY47_08715 SM00244 prohibitin homologues ATY47_08795 SM00116 Domain in cystathionine beta-synthase and other proteins. ATY47_08845 SM00867 YceI-like domain ATY47_08855 SM00867 YceI-like domain ATY47_08860 SM00387 Histidine kinase-like ATPases ATY47_08860 SM00388 His Kinase A (phosphoacceptor) domain ATY47_08860 SM00448 cheY-homologous receiver domain ATY47_08865 SM00387 Histidine kinase-like ATPases ATY47_08865 SM00388 His Kinase A (phosphoacceptor) domain ATY47_08865 SM00448 cheY-homologous receiver domain ATY47_08870 SM00387 Histidine kinase-like ATPases ATY47_08870 SM00388 His Kinase A (phosphoacceptor) domain ATY47_08870 SM00448 cheY-homologous receiver domain ATY47_08890 SM00812 Alpha-L-fucosidase ATY47_08920 SM00530 Helix-turn-helix XRE-family like proteins ATY47_08970 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY47_08975 SM00838 Elongation factor G C-terminus ATY47_08990 SM00358 Double-stranded RNA binding motif ATY47_08990 SM00535 Ribonuclease III family ATY47_09005 SM00448 cheY-homologous receiver domain ATY47_09015 SM01118 ATY47_09015 ATY47_09060 SM00357 Cold shock protein domain ATY47_09085 SM00487 DEAD-like helicases superfamily ATY47_09085 SM00490 helicase superfamily c-terminal domain ATY47_09115 SM00267 diguanylate cyclase ATY47_09135 SM00869 Autotransporter beta-domain ATY47_09140 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ATY47_09485 SM00382 ATPases associated with a variety of cellular activities ATY47_09505 SM00481 DNA polymerase alpha chain like domain ATY47_09540 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY47_09595 SM00972 Spore Coat Protein U domain ATY47_09610 SM00972 Spore Coat Protein U domain ATY47_09620 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY47_09650 SM01172 ATY47_09650 ATY47_09655 SM00710 Parallel beta-helix repeats ATY47_09655 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses ATY47_09680 SM00434 DNA Topoisomerase IV ATY47_09690 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY47_09735 SM01126 ATY47_09735 ATY47_09760 SM00861 Transketolase, pyrimidine binding domain ATY47_09765 SM00507 HNH nucleases ATY47_09835 SM00271 DnaJ molecular chaperone homology domain ATY47_09865 SM00382 ATPases associated with a variety of cellular activities ATY47_09890 SM00861 Transketolase, pyrimidine binding domain ATY47_09900 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. ATY47_09905 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY47_09985 SM00382 ATPases associated with a variety of cellular activities ATY47_09990 SM00345 helix_turn_helix gluconate operon transcriptional repressor ATY47_10005 SM00984 UDP binding domain ATY47_10025 SM00354 helix_turn _helix lactose operon repressor ATY47_10045 SM01018 B12 binding domain ATY47_10055 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ATY47_10080 SM00316 Ribosomal protein S1-like RNA-binding domain ATY47_10080 SM00357 Cold shock protein domain ATY47_10080 SM00955 ATY47_10080 ATY47_10100 SM00967 RNA 2'-O ribose methyltransferase substrate binding ATY47_10170 SM01126 ATY47_10170 ATY47_10190 SM01126 ATY47_10190 ATY47_10340 SM01007 Class II Aldolase and Adducin N-terminal domain ATY47_10425 SM00382 ATPases associated with a variety of cellular activities ATY47_10440 SM01126 ATY47_10440 ATY47_10455 SM00363 S4 RNA-binding domain ATY47_10480 SM00354 helix_turn _helix lactose operon repressor ATY47_10550 SM00316 Ribosomal protein S1-like RNA-binding domain ATY47_10555 SM00411 bacterial (prokaryotic) histone like domain ATY47_10575 SM00822 ATY47_10575 ATY47_10625 SM00116 Domain in cystathionine beta-synthase and other proteins. ATY47_10625 SM01240 ATY47_10625 ATY47_10675 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY47_10685 SM00529 Helix-turn-helix diphteria tox regulatory element ATY47_10695 SM00479 ATY47_10695 ATY47_10780 SM00316 Ribosomal protein S1-like RNA-binding domain ATY47_10780 SM00732 Likely ribonuclease with RNase H fold. ATY47_10790 SM00448 cheY-homologous receiver domain ATY47_10795 SM00387 Histidine kinase-like ATPases ATY47_10805 SM00014 Acid phosphatase homologues ATY47_11215 SM01126 ATY47_11215 ATY47_11260 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ATY47_11260 SM00465 GIY-YIG type nucleases (URI domain) ATY47_11270 SM00226 Low molecular weight phosphatase family ATY47_11285 SM00382 ATPases associated with a variety of cellular activities ATY47_11300 SM00849 Metallo-beta-lactamase superfamily ATY47_11305 SM01126 ATY47_11305 ATY47_11315 SM00382 ATPases associated with a variety of cellular activities ATY47_11365 SM00382 ATPases associated with a variety of cellular activities ATY47_11420 SM00448 cheY-homologous receiver domain ATY47_11425 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY47_11425 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY47_11425 SM00091 PAS domain ATY47_11425 SM00387 Histidine kinase-like ATPases ATY47_11425 SM00388 His Kinase A (phosphoacceptor) domain ATY47_11425 SM00448 cheY-homologous receiver domain ATY47_11455 SM00267 diguanylate cyclase ATY47_11500 SM00382 ATPases associated with a variety of cellular activities ATY47_11545 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY47_11575 SM00631 ATY47_11575 ATY47_11580 SM01217 ATY47_11580 ATY47_11595 SM00052 Putative diguanylate phosphodiesterase ATY47_11595 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY47_11595 SM00267 diguanylate cyclase ATY47_11665 SM00646 ATY47_11665 ATY47_11695 SM00869 Autotransporter beta-domain ATY47_11715 SM00387 Histidine kinase-like ATPases ATY47_11715 SM00388 His Kinase A (phosphoacceptor) domain ATY47_11720 SM00421 helix_turn_helix, Lux Regulon ATY47_11720 SM00448 cheY-homologous receiver domain ATY47_11725 SM00869 Autotransporter beta-domain ATY47_11745 SM00830 Chorismate mutase type II ATY47_11765 SM00240 Forkhead associated domain ATY47_11785 SM00345 helix_turn_helix gluconate operon transcriptional repressor ATY47_11785 SM00866 ATY47_11785 ATY47_11835 SM00434 DNA Topoisomerase IV ATY47_11855 SM00292 breast cancer carboxy-terminal domain ATY47_11855 SM00532 Ligase N family ATY47_11865 SM00771 ZipA, C-terminal domain (FtsZ-binding) ATY47_11870 SM00968 SMC proteins Flexible Hinge Domain ATY47_11925 SM00947 Carbonic anhydrase ATY47_11950 SM00479 ATY47_11950 ATY47_11980 SM00981 ATY47_11980 ATY47_11995 SM00382 ATPases associated with a variety of cellular activities ATY47_12015 SM00644 ATY47_12015 ATY47_12025 SM00450 Rhodanese Homology Domain ATY47_12050 SM00478 endonuclease III ATY47_12060 SM00947 Carbonic anhydrase ATY47_12115 SM00382 ATPases associated with a variety of cellular activities ATY47_12130 SM00479 ATY47_12130 ATY47_12185 SM01323 ATY47_12185 ATY47_12200 SM00344 helix_turn_helix ASNC type ATY47_12305 SM00387 Histidine kinase-like ATPases ATY47_12325 SM00450 Rhodanese Homology Domain ATY47_12335 SM01126 ATY47_12335 ATY47_12395 SM00852 Probable molybdopterin binding domain ATY47_12400 SM00382 ATPases associated with a variety of cellular activities ATY47_12405 SM00564 beta-propeller repeat ATY47_12420 SM00028 Tetratricopeptide repeats ATY47_12430 SM00562 ATY47_12430 ATY47_12470 SM00382 ATPases associated with a variety of cellular activities ATY47_12490 SM00382 ATPases associated with a variety of cellular activities ATY47_12490 SM00843 ATY47_12490 ATY47_12520 SM00316 Ribosomal protein S1-like RNA-binding domain ATY47_12525 SM00382 ATPases associated with a variety of cellular activities ATY47_12525 SM01086 C-terminal, D2-small domain, of ClpB protein ATY47_12550 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY47_12565 SM00052 Putative diguanylate phosphodiesterase ATY47_12565 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY47_12565 SM00091 PAS domain ATY47_12565 SM00267 diguanylate cyclase ATY47_12570 SM00091 PAS domain ATY47_12570 SM00387 Histidine kinase-like ATPases ATY47_12575 SM00052 Putative diguanylate phosphodiesterase ATY47_12575 SM00267 diguanylate cyclase ATY47_12575 SM00448 cheY-homologous receiver domain ATY47_12580 SM00387 Histidine kinase-like ATPases ATY47_12595 SM00858 ATY47_12595 ATY47_12600 SM00260 Two component signalling adaptor domain ATY47_12600 SM00448 cheY-homologous receiver domain ATY47_12645 SM00047 Lysozyme subfamily 2 ATY47_12685 SM00421 helix_turn_helix, Lux Regulon ATY47_12685 SM00448 cheY-homologous receiver domain ATY47_12695 SM00448 cheY-homologous receiver domain ATY47_12700 SM00382 ATPases associated with a variety of cellular activities ATY47_12720 SM00822 ATY47_12720 ATY47_12725 SM00822 ATY47_12725 ATY47_12775 SM00382 ATPases associated with a variety of cellular activities ATY47_12825 SM00267 diguanylate cyclase ATY47_12830 SM00267 diguanylate cyclase ATY47_12835 SM00052 Putative diguanylate phosphodiesterase ATY47_12835 SM00267 diguanylate cyclase ATY47_12850 SM00382 ATPases associated with a variety of cellular activities ATY47_12850 SM00962 SRP54-type protein, GTPase domain ATY47_12865 SM00448 cheY-homologous receiver domain ATY47_12875 SM00073 Histidine Phosphotransfer domain ATY47_12875 SM00260 Two component signalling adaptor domain ATY47_12875 SM00387 Histidine kinase-like ATPases ATY47_12875 SM01231 ATY47_12875 ATY47_13015 SM01126 ATY47_13015 ATY47_13030 SM00382 ATPases associated with a variety of cellular activities ATY47_13035 SM00382 ATPases associated with a variety of cellular activities ATY47_13070 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ATY47_13080 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase ATY47_13100 SM00859 Semialdehyde dehydrogenase, NAD binding domain ATY47_13140 SM00840 ATY47_13140 ATY47_13155 SM00245 tail specific protease ATY47_13170 SM01234 ATY47_13170 ATY47_13275 SM00841 Elongation factor P, C-terminal ATY47_13275 SM01185 ATY47_13275 ATY47_13285 SM00052 Putative diguanylate phosphodiesterase ATY47_13285 SM00267 diguanylate cyclase ATY47_13285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY47_13325 SM00382 ATPases associated with a variety of cellular activities ATY47_13330 SM00382 ATPases associated with a variety of cellular activities ATY47_13330 SM00487 DEAD-like helicases superfamily ATY47_13330 SM00490 helicase superfamily c-terminal domain ATY47_13355 SM00357 Cold shock protein domain ATY47_13365 SM01322 ATY47_13365 ATY47_13375 SM00052 Putative diguanylate phosphodiesterase ATY47_13375 SM00267 diguanylate cyclase ATY47_13390 SM00822 ATY47_13390 ATY47_13410 SM00853 MutL C terminal dimerisation domain ATY47_13410 SM01340 ATY47_13410 ATY47_13415 SM00646 ATY47_13415 ATY47_13465 SM00474 3'-5' exonuclease ATY47_13480 SM00528 Domain in histone-like proteins of HNS family ATY47_13515 SM01126 ATY47_13515 ATY47_13585 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY47_13610 SM00116 Domain in cystathionine beta-synthase and other proteins. ATY47_13610 SM01091 Transporter associated domain ATY47_13670 SM01230 ATY47_13670 ATY47_13680 SM01230 ATY47_13680 ATY47_13690 SM00267 diguanylate cyclase ATY47_13690 SM00448 cheY-homologous receiver domain ATY47_13745 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY47_13745 SM00091 PAS domain ATY47_13745 SM00387 Histidine kinase-like ATPases ATY47_13745 SM00388 His Kinase A (phosphoacceptor) domain ATY47_13745 SM00448 cheY-homologous receiver domain ATY47_13745 SM01079 ATY47_13745 ATY47_13750 SM00448 cheY-homologous receiver domain ATY47_13750 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY47_13785 SM01126 ATY47_13785 ATY47_13795 SM00354 helix_turn _helix lactose operon repressor ATY47_13995 SM00260 Two component signalling adaptor domain ATY47_14005 SM00448 cheY-homologous receiver domain ATY47_14010 SM00073 Histidine Phosphotransfer domain ATY47_14010 SM00260 Two component signalling adaptor domain ATY47_14010 SM00387 Histidine kinase-like ATPases ATY47_14010 SM01231 ATY47_14010 ATY47_14035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY47_14040 SM01126 ATY47_14040 ATY47_14045 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY47_14045 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY47_14050 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY47_14050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY47_14055 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY47_14055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY47_14060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY47_14060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY47_14065 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY47_14065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY47_14075 SM00260 Two component signalling adaptor domain ATY47_14095 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY47_14095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY47_14100 SM00138 Methyltransferase, chemotaxis proteins ATY47_14110 SM00448 cheY-homologous receiver domain ATY47_14115 SM00052 Putative diguanylate phosphodiesterase ATY47_14115 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY47_14115 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY47_14115 SM00091 PAS domain ATY47_14115 SM00267 diguanylate cyclase ATY47_14135 SM00966 SpoVT / AbrB like domain ATY47_14160 SM00073 Histidine Phosphotransfer domain ATY47_14160 SM00387 Histidine kinase-like ATPases ATY47_14160 SM00388 His Kinase A (phosphoacceptor) domain ATY47_14160 SM00448 cheY-homologous receiver domain ATY47_14170 SM00448 cheY-homologous receiver domain ATY47_14170 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY47_14180 SM00937 ATY47_14180 ATY47_14185 SM00850 LytTr DNA-binding domain ATY47_14225 SM00851 MGS-like domain ATY47_14225 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ATY47_14235 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain ATY47_14285 SM00899 ATY47_14285 ATY47_14305 SM00822 ATY47_14305 ATY47_14310 SM00841 Elongation factor P, C-terminal ATY47_14310 SM01185 ATY47_14310 ATY47_14360 SM00758 ATY47_14360 ATY47_14380 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ATY47_14405 SM01130 ATY47_14405 ATY47_14425 SM00670 Large family of predicted nucleotide-binding domains ATY47_14520 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ATY47_14530 SM00382 ATPases associated with a variety of cellular activities ATY47_14570 SM00382 ATPases associated with a variety of cellular activities ATY47_14580 SM01103 ATY47_14580 ATY47_14590 SM00257 Lysin motif ATY47_14610 SM00463 Small MutS-related domain ATY47_14635 SM01192 ATY47_14635 ATY47_14635 SM01193 ATY47_14635 ATY47_14660 SM00387 Histidine kinase-like ATPases ATY47_14660 SM00433 TopoisomeraseII ATY47_14690 SM01091 Transporter associated domain ATY47_14715 SM00382 ATPases associated with a variety of cellular activities ATY47_14725 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY47_14980 SM00448 cheY-homologous receiver domain ATY47_14980 SM00862 Transcriptional regulatory protein, C terminal ATY47_14990 SM00387 Histidine kinase-like ATPases ATY47_15030 SM00331 Sigma factor PP2C-like phosphatases ATY47_15030 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ATY47_15055 SM00240 Forkhead associated domain ATY47_15085 SM00382 ATPases associated with a variety of cellular activities ATY47_15085 SM01086 C-terminal, D2-small domain, of ClpB protein ATY47_15215 SM00363 S4 RNA-binding domain ATY47_15220 SM00316 Ribosomal protein S1-like RNA-binding domain ATY47_15240 SM00421 helix_turn_helix, Lux Regulon ATY47_15240 SM00448 cheY-homologous receiver domain ATY47_15245 SM00450 Rhodanese Homology Domain ATY47_15270 SM00984 UDP binding domain ATY47_15320 SM01126 ATY47_15320 ATY47_15330 SM01126 ATY47_15330 ATY47_15340 SM01012 ATY47_15340 ATY47_15380 SM00852 Probable molybdopterin binding domain ATY47_15480 SM00944 Pro-kumamolisin, activation domain ATY47_15550 SM01130 ATY47_15550 ATY47_15575 SM00342 helix_turn_helix, arabinose operon control protein ATY47_15580 SM00382 ATPases associated with a variety of cellular activities ATY47_15580 SM00962 SRP54-type protein, GTPase domain ATY47_15580 SM00963 SRP54-type protein, helical bundle domain ATY47_15590 SM00478 endonuclease III ATY47_15600 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY47_15600 SM00091 PAS domain ATY47_15600 SM00387 Histidine kinase-like ATPases ATY47_15600 SM00388 His Kinase A (phosphoacceptor) domain ATY47_15600 SM00448 cheY-homologous receiver domain ATY47_15620 SM01126 ATY47_15620 ATY47_15765 SM00422 helix_turn_helix, mercury resistance ATY47_15770 SM00411 bacterial (prokaryotic) histone like domain ATY47_15775 SM00873 B3/4 domain ATY47_15775 SM00874 tRNA synthetase B5 domain ATY47_15775 SM00896 Ferredoxin-fold anticodon binding domain ATY47_15800 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ATY47_15830 SM00487 DEAD-like helicases superfamily ATY47_15830 SM00490 helicase superfamily c-terminal domain ATY47_15910 SM01001 AIR carboxylase ATY47_15930 SM00316 Ribosomal protein S1-like RNA-binding domain ATY47_15930 SM00322 K homology RNA-binding domain ATY47_15935 SM01387 ATY47_15935 ATY47_15955 SM00316 Ribosomal protein S1-like RNA-binding domain ATY47_15955 SM00322 K homology RNA-binding domain ATY47_16005 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ATY47_16010 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ATY47_16055 SM00822 ATY47_16055 ATY47_16080 SM00052 Putative diguanylate phosphodiesterase ATY47_16080 SM00267 diguanylate cyclase ATY47_16080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY47_16145 SM00859 Semialdehyde dehydrogenase, NAD binding domain ATY47_16175 SM00257 Lysin motif ATY47_16205 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY47_16245 SM01160 ATY47_16245 ATY47_16255 SM01126 ATY47_16255 ATY47_16305 SM00098 Alkaline phosphatase homologues ATY47_16310 SM00977 TilS substrate C-terminal domain ATY47_16360 SM00316 Ribosomal protein S1-like RNA-binding domain ATY47_16440 SM01126 ATY47_16440 ATY47_16490 SM01126 ATY47_16490 ATY47_16505 SM00642 Alpha-amylase domain ATY47_16525 SM01126 ATY47_16525 ATY47_16555 SM00528 Domain in histone-like proteins of HNS family ATY47_16595 SM01126 ATY47_16595 ATY47_16605 SM00869 Autotransporter beta-domain ATY47_16690 SM00967 RNA 2'-O ribose methyltransferase substrate binding ATY47_16710 SM01126 ATY47_16710 ATY47_16775 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY47_16775 SM00387 Histidine kinase-like ATPases ATY47_16810 SM00506 Appr-1"-p processing enzyme ATY47_16860 SM01060 ATY47_16860 ATY47_16880 SM01126 ATY47_16880 ATY47_16895 SM00091 PAS domain ATY47_16895 SM00342 helix_turn_helix, arabinose operon control protein ATY47_16965 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY47_16970 SM00481 DNA polymerase alpha chain like domain ATY47_16990 SM00966 SpoVT / AbrB like domain ATY47_17015 SM00855 Phosphoglycerate mutase family ATY47_17045 SM00220 Serine/Threonine protein kinases, catalytic domain ATY47_17055 SM00487 DEAD-like helicases superfamily ATY47_17100 SM00487 DEAD-like helicases superfamily ATY47_17100 SM00490 helicase superfamily c-terminal domain ATY47_17180 SM00382 ATPases associated with a variety of cellular activities ATY47_17180 SM01086 C-terminal, D2-small domain, of ClpB protein ATY47_17440 SM00478 endonuclease III ATY47_17465 SM00421 helix_turn_helix, Lux Regulon ATY47_17465 SM00448 cheY-homologous receiver domain ATY47_17500 SM00387 Histidine kinase-like ATPases ATY47_17500 SM00388 His Kinase A (phosphoacceptor) domain ATY47_17505 SM00448 cheY-homologous receiver domain ATY47_17505 SM00862 Transcriptional regulatory protein, C terminal ATY47_17540 SM00382 ATPases associated with a variety of cellular activities ATY47_17570 SM00990 ATY47_17570 ATY47_17625 SM00662 RNA polymerases D ATY47_17630 SM00363 S4 RNA-binding domain ATY47_17630 SM01390 ATY47_17630 ATY47_17690 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ATY47_17695 SM01374 ATY47_17695 ATY47_17715 SM00322 K homology RNA-binding domain ATY47_17730 SM01382 ATY47_17730 ATY47_17730 SM01383 ATY47_17730 ATY47_17750 SM01403 ATY47_17750 ATY47_17765 SM00838 Elongation factor G C-terminus ATY47_17765 SM00889 Elongation factor G, domain IV ATY47_17780 SM00663 RNA polymerase I subunit A N-terminus ATY47_17805 SM00649 Ribosomal protein L11/L12 ATY47_17810 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. ATY47_17810 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ATY47_17860 SM01400 ATY47_17860 ATY47_17880 SM00028 Tetratricopeptide repeats ATY47_17890 SM00937 ATY47_17890 ATY47_17895 SM00028 Tetratricopeptide repeats ATY47_17900 SM00852 Probable molybdopterin binding domain ATY47_18015 SM01002 Alanine dehydrogenase/PNT, C-terminal domain ATY47_18015 SM01003 Alanine dehydrogenase/PNT, N-terminal domain ATY47_18030 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ATY47_18030 SM00475 5'-3' exonuclease ATY47_18105 SM01126 ATY47_18105 ATY47_18165 SM00448 cheY-homologous receiver domain ATY47_18165 SM00862 Transcriptional regulatory protein, C terminal ATY47_18170 SM00387 Histidine kinase-like ATPases ATY47_18170 SM00388 His Kinase A (phosphoacceptor) domain ATY47_18190 SM00014 Acid phosphatase homologues ATY47_18230 SM00855 Phosphoglycerate mutase family ATY47_18250 SM00829 Enoylreductase ATY47_18260 SM00382 ATPases associated with a variety of cellular activities ATY47_18305 SM00829 Enoylreductase ATY47_18350 SM00387 Histidine kinase-like ATPases ATY47_18350 SM00448 cheY-homologous receiver domain ATY47_18355 SM00448 cheY-homologous receiver domain ATY47_18450 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY47_18495 SM01126 ATY47_18495 ATY47_18550 SM00650 Ribosomal RNA adenine dimethylases ATY47_18610 SM00387 Histidine kinase-like ATPases ATY47_18610 SM00388 His Kinase A (phosphoacceptor) domain ATY47_18615 SM00448 cheY-homologous receiver domain ATY47_18615 SM00862 Transcriptional regulatory protein, C terminal ATY47_18625 SM00382 ATPases associated with a variety of cellular activities ATY47_18645 SM00382 ATPases associated with a variety of cellular activities ATY47_18760 SM00996 S-adenosyl-L-homocysteine hydrolase ATY47_18760 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ATY47_18815 SM00829 Enoylreductase ATY47_18845 SM00957 SecA DEAD-like domain ATY47_18845 SM00958 SecA preprotein cross-linking domain ATY47_18865 SM00864 Tubulin/FtsZ family, GTPase domain ATY47_18865 SM00865 Tubulin/FtsZ family, C-terminal domain ATY47_18870 SM00842 Cell division protein FtsA ATY47_18970 SM00448 cheY-homologous receiver domain ATY47_18970 SM00862 Transcriptional regulatory protein, C terminal ATY47_18975 SM00387 Histidine kinase-like ATPases ATY47_18975 SM00388 His Kinase A (phosphoacceptor) domain ATY47_19085 SM00382 ATPases associated with a variety of cellular activities ATY47_19115 SM00829 Enoylreductase ATY47_19130 SM00448 cheY-homologous receiver domain ATY47_19130 SM00862 Transcriptional regulatory protein, C terminal ATY47_19135 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY47_19135 SM00387 Histidine kinase-like ATPases ATY47_19135 SM00388 His Kinase A (phosphoacceptor) domain ATY47_19270 SM01126 ATY47_19270 ATY47_19300 SM01126 ATY47_19300 ATY47_19345 SM00354 helix_turn _helix lactose operon repressor ATY47_19355 SM00345 helix_turn_helix gluconate operon transcriptional repressor ATY47_19355 SM00866 ATY47_19355 ATY47_19410 SM00387 Histidine kinase-like ATPases ATY47_19410 SM00388 His Kinase A (phosphoacceptor) domain ATY47_19410 SM00448 cheY-homologous receiver domain ATY47_19415 SM00448 cheY-homologous receiver domain ATY47_19420 SM00387 Histidine kinase-like ATPases ATY47_19420 SM00388 His Kinase A (phosphoacceptor) domain ATY47_19425 SM00749 bacterial OsmY and nodulation domain ATY47_19435 SM01350 ATY47_19435 ATY47_19485 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY47_19485 SM00245 tail specific protease ATY47_19490 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY47_19510 SM00936 Penicillin-binding protein 5, C-terminal domain ATY47_19580 SM00268 Actin ATY47_19635 SM00267 diguanylate cyclase ATY47_19640 SM01263 ATY47_19640 ATY47_19655 SM00382 ATPases associated with a variety of cellular activities ATY47_19655 SM01086 C-terminal, D2-small domain, of ClpB protein ATY47_19735 SM00448 cheY-homologous receiver domain ATY47_19735 SM00850 LytTr DNA-binding domain ATY47_19760 SM00267 diguanylate cyclase ATY47_19775 SM00637 ATY47_19775 ATY47_19790 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY47_19790 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY47_19790 SM00091 PAS domain ATY47_19790 SM00267 diguanylate cyclase ATY47_19800 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY47_19865 SM00060 Fibronectin type 3 domain ATY47_19965 SM00046 Diacylglycerol kinase catalytic domain (presumed) ATY47_19980 SM00271 DnaJ molecular chaperone homology domain ATY47_20080 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY47_20115 SM01126 ATY47_20115 ATY47_20230 SM00644 ATY47_20230 ATY47_20240 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ATY47_20255 SM01126 ATY47_20255 ATY47_20330 SM01126 ATY47_20330 ATY47_20340 SM01126 ATY47_20340 ATY47_20350 SM01217 ATY47_20350 ATY47_20355 SM00905 Dihydroneopterin aldolase ATY47_20380 SM00400 zinc finger ATY47_20380 SM00493 ATY47_20380 ATY47_20380 SM00766 DNA primase DnaG DnaB-binding ATY47_20470 SM01126 ATY47_20470 ATY47_20525 SM00100 Cyclic nucleotide-monophosphate binding domain ATY47_20525 SM00419 helix_turn_helix, cAMP Regulatory protein ATY47_20545 SM00903 Flavin reductase like domain ATY47_20670 SM01150 ATY47_20670 ATY47_20680 SM01126 ATY47_20680 ATY47_20685 SM01126 ATY47_20685 ATY47_20700 SM00450 Rhodanese Homology Domain ATY47_20725 SM00387 Histidine kinase-like ATPases ATY47_20725 SM00388 His Kinase A (phosphoacceptor) domain ATY47_20730 SM00382 ATPases associated with a variety of cellular activities ATY47_20730 SM00448 cheY-homologous receiver domain ATY47_20810 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY47_20815 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY47_20830 SM01126 ATY47_20830 ATY47_20900 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ATY47_20900 SM00474 3'-5' exonuclease ATY47_20900 SM00475 5'-3' exonuclease ATY47_20900 SM00482 DNA polymerase A domain ATY47_20930 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY47_20995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY47_20995 SM00331 Sigma factor PP2C-like phosphatases ATY47_21010 SM00867 YceI-like domain ATY47_21040 SM00944 Pro-kumamolisin, activation domain ATY47_21085 SM01126 ATY47_21085 ATY47_21130 SM00883 Chaperonin 10 Kd subunit ATY47_21175 SM00986 Uracil DNA glycosylase superfamily ATY47_21175 SM00987 UreE urease accessory protein, C-terminal domain ATY47_21180 SM00448 cheY-homologous receiver domain ATY47_21190 SM00382 ATPases associated with a variety of cellular activities ATY47_21195 SM00487 DEAD-like helicases superfamily ATY47_21195 SM00490 helicase superfamily c-terminal domain ATY47_21205 SM00357 Cold shock protein domain ATY47_21205 SM00382 ATPases associated with a variety of cellular activities ATY47_21205 SM00959 Rho termination factor, N-terminal domain ATY47_21265 SM00563 Phosphate acyltransferases ATY47_21380 SM00388 His Kinase A (phosphoacceptor) domain ATY47_21385 SM00387 Histidine kinase-like ATPases ATY47_21390 SM00448 cheY-homologous receiver domain ATY47_21390 SM00862 Transcriptional regulatory protein, C terminal ATY47_21460 SM01126 ATY47_21460 ATY47_21560 SM00878 Biotin carboxylase C-terminal domain ATY47_21630 SM00833 Cobalamin synthesis protein cobW C-terminal domain ATY47_21675 SM00836 DALR anticodon binding domain ATY47_21685 SM00382 ATPases associated with a variety of cellular activities ATY47_21765 SM00354 helix_turn _helix lactose operon repressor ATY47_21780 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ATY47_21790 SM00758 ATY47_21790 ATY47_21790 SM01217 ATY47_21790 ATY47_21820 SM00633 Glycosyl hydrolase family 10 ATY47_21825 SM00633 Glycosyl hydrolase family 10 ATY47_21865 SM01126 ATY47_21865 ATY47_21930 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY47_21965 SM00530 Helix-turn-helix XRE-family like proteins ATY47_22015 SM00530 Helix-turn-helix XRE-family like proteins ATY47_22085 SM00382 ATPases associated with a variety of cellular activities ATY47_22085 SM00448 cheY-homologous receiver domain ATY47_22090 SM00387 Histidine kinase-like ATPases ATY47_22090 SM00388 His Kinase A (phosphoacceptor) domain ATY47_22100 SM00938 Nitrogen regulatory protein P-II ATY47_22105 SM01230 ATY47_22105 ATY47_22130 SM00028 Tetratricopeptide repeats ATY47_22145 SM00563 Phosphate acyltransferases ATY47_22155 SM00155 Phospholipase D. Active site motifs. ATY47_22160 SM00867 YceI-like domain ATY47_22165 SM00855 Phosphoglycerate mutase family ATY47_22190 SM00530 Helix-turn-helix XRE-family like proteins ATY47_22220 SM00382 ATPases associated with a variety of cellular activities ATY47_22235 SM00382 ATPases associated with a variety of cellular activities ATY47_22250 SM01126 ATY47_22250 ATY47_22290 SM00829 Enoylreductase ATY47_22320 SM00487 DEAD-like helicases superfamily ATY47_22320 SM00490 helicase superfamily c-terminal domain ATY47_22320 SM00847 Helicase associated domain (HA2) Add an annotation ATY47_22330 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ATY47_22380 SM00421 helix_turn_helix, Lux Regulon ATY47_22380 SM00448 cheY-homologous receiver domain ATY47_22500 SM00155 Phospholipase D. Active site motifs. ATY47_22525 SM01126 ATY47_22525 ATY47_22570 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY47_22600 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY47_22600 SM00245 tail specific protease ATY47_22675 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY47_22815 SM00014 Acid phosphatase homologues ATY47_22825 SM00028 Tetratricopeptide repeats