ATY48_00005 PF00308 Bacterial dnaA protein ATY48_00005 PF08299 Bacterial dnaA protein helix-turn-helix ATY48_00005 PF11638 DnaA N-terminal domain ATY48_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ATY48_00010 PF02767 DNA polymerase III beta subunit, central domain ATY48_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ATY48_00015 PF02463 RecF/RecN/SMC N terminal domain ATY48_00020 PF00204 DNA gyrase B ATY48_00020 PF00986 DNA gyrase B subunit, carboxyl terminus ATY48_00020 PF01751 Toprim domain ATY48_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_00025 PF02517 CAAX protease self-immunity ATY48_00030 PF01435 Peptidase family M48 ATY48_00035 PF09295 ChAPs (Chs5p-Arf1p-binding proteins) ATY48_00035 PF13181 Tetratricopeptide repeat ATY48_00040 PF03544 Gram-negative bacterial TonB protein C-terminal ATY48_00045 PF01618 ATY48_00045 ATY48_00050 PF02472 Biopolymer transport protein ExbD/TolR ATY48_00055 PF02472 Biopolymer transport protein ExbD/TolR ATY48_00060 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ATY48_00070 PF13091 PLD-like domain ATY48_00080 PF00316 Fructose-1-6-bisphosphatase ATY48_00085 PF00155 Aminotransferase class I and II ATY48_00090 PF00593 TonB dependent receptor ATY48_00090 PF07715 TonB-dependent Receptor Plug Domain ATY48_00100 PF01609 Transposase DDE domain ATY48_00100 PF05598 ATY48_00100 ATY48_00105 PF01070 FMN-dependent dehydrogenase ATY48_00110 PF04191 Phospholipid methyltransferase ATY48_00125 PF07055 Enoyl reductase FAD binding domain ATY48_00125 PF12241 Trans-2-enoyl-CoA reductase catalytic region ATY48_00125 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ATY48_00130 PF00294 pfkB family carbohydrate kinase ATY48_00145 PF01609 Transposase DDE domain ATY48_00145 PF05598 ATY48_00145 ATY48_00165 PF01609 Transposase DDE domain ATY48_00165 PF05598 ATY48_00165 ATY48_00175 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ATY48_00180 PF12760 Transposase zinc-ribbon domain ATY48_00180 PF12762 ATY48_00180 ATY48_00185 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ATY48_00195 PF01609 Transposase DDE domain ATY48_00195 PF05598 ATY48_00195 ATY48_00205 PF00270 DEAD/DEAH box helicase ATY48_00205 PF00271 Helicase conserved C-terminal domain ATY48_00215 PF06903 ATY48_00215 ATY48_00220 PF00890 FAD binding domain ATY48_00220 PF13454 FAD-NAD(P)-binding ATY48_00240 PF01609 Transposase DDE domain ATY48_00240 PF05598 ATY48_00240 ATY48_00245 PF01609 Transposase DDE domain ATY48_00255 PF13340 ATY48_00255 ATY48_00260 PF01609 Transposase DDE domain ATY48_00270 PF05593 ATY48_00270 ATY48_00275 PF12760 Transposase zinc-ribbon domain ATY48_00275 PF12762 ATY48_00275 ATY48_00290 PF03150 Di-haem cytochrome c peroxidase ATY48_00295 PF13460 NADH(P)-binding ATY48_00300 PF00128 Alpha amylase, catalytic domain ATY48_00300 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ATY48_00305 PF11154 ATY48_00305 ATY48_00310 PF00128 Alpha amylase, catalytic domain ATY48_00315 PF02446 4-alpha-glucanotransferase ATY48_00320 PF00128 Alpha amylase, catalytic domain ATY48_00320 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ATY48_00320 PF11941 Domain of unknown function (DUF3459) ATY48_00325 PF00128 Alpha amylase, catalytic domain ATY48_00325 PF02806 Alpha amylase, C-terminal all-beta domain ATY48_00325 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ATY48_00330 PF00534 Glycosyl transferases group 1 ATY48_00330 PF08323 Starch synthase catalytic domain ATY48_00335 PF00990 GGDEF domain ATY48_00340 PF02638 ATY48_00340 ATY48_00345 PF05661 ATY48_00345 ATY48_00350 PF03109 ATY48_00350 ATY48_00355 PF13586 ATY48_00355 ATY48_00360 PF13340 ATY48_00360 ATY48_00370 PF00924 Mechanosensitive ion channel ATY48_00370 PF12607 ATY48_00370 ATY48_00375 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ATY48_00385 PF13358 DDE superfamily endonuclease ATY48_00385 PF13592 ATY48_00385 ATY48_00395 PF01464 Transglycosylase SLT domain ATY48_00405 PF00263 ATY48_00405 ATY48_00405 PF03958 Bacterial type II/III secretion system short domain ATY48_00410 PF01311 ATY48_00410 ATY48_00415 PF09486 ATY48_00415 ATY48_00420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATY48_00420 PF02874 ATP synthase alpha/beta family, beta-barrel domain ATY48_00425 PF02108 ATY48_00425 ATY48_00430 PF09502 ATY48_00430 ATY48_00435 PF01514 Secretory protein of YscJ/FliF family ATY48_00440 PF09487 ATY48_00440 ATY48_00445 PF09613 ATY48_00445 ATY48_00450 PF01312 FlhB HrpN YscU SpaS Family ATY48_00455 PF00771 FHIPEP family ATY48_00460 PF09483 ATY48_00460 ATY48_00465 PF01052 Surface presentation of antigens (SPOA) ATY48_00470 PF00813 ATY48_00470 ATY48_00475 PF01313 ATY48_00475 ATY48_00500 PF05932 Tir chaperone protein (CesT) family ATY48_00520 PF05819 ATY48_00520 ATY48_00525 PF13855 Leucine rich repeat ATY48_00545 PF13180 PDZ domain ATY48_00545 PF13365 Trypsin-like peptidase domain ATY48_00560 PF01370 NAD dependent epimerase/dehydratase family ATY48_00560 PF08338 Domain of unknown function (DUF1731) ATY48_00570 PF01609 Transposase DDE domain ATY48_00570 PF05598 ATY48_00570 ATY48_00590 PF13358 DDE superfamily endonuclease ATY48_00590 PF13551 Winged helix-turn helix ATY48_00590 PF13592 ATY48_00590 ATY48_00595 PF00665 Integrase core domain ATY48_00610 PF00293 NUDIX domain ATY48_00620 PF10116 ATY48_00620 ATY48_00630 PF13936 Helix-turn-helix domain ATY48_00635 PF16576 ATY48_00635 ATY48_00640 PF00005 ABC transporter ATY48_00645 PF02687 ATY48_00645 ATY48_00645 PF12704 MacB-like periplasmic core domain ATY48_00650 PF02687 ATY48_00650 ATY48_00650 PF12704 MacB-like periplasmic core domain ATY48_00655 PF00665 Integrase core domain ATY48_00660 PF12760 Transposase zinc-ribbon domain ATY48_00660 PF12762 ATY48_00660 ATY48_00665 PF08845 ATY48_00665 ATY48_00670 PF05016 Plasmid stabilisation system protein ATY48_00675 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system ATY48_00680 PF03006 ATY48_00680 ATY48_00685 PF00270 DEAD/DEAH box helicase ATY48_00685 PF00271 Helicase conserved C-terminal domain ATY48_00685 PF09369 ATY48_00685 ATY48_00690 PF13482 RNase_H superfamily ATY48_00695 PF03009 Glycerophosphoryl diester phosphodiesterase family ATY48_00700 PF00480 ROK family ATY48_00705 PF00593 TonB dependent receptor ATY48_00705 PF07715 TonB-dependent Receptor Plug Domain ATY48_00710 PF08975 Domain of unknown function (DUF1868) ATY48_00715 PF03435 Saccharopine dehydrogenase ATY48_00730 PF01028 Eukaryotic DNA topoisomerase I, catalytic core ATY48_00735 PF11720 Peptidase inhibitor I78 family ATY48_00740 PF00310 Glutamine amidotransferases class-II ATY48_00740 PF01493 GXGXG motif ATY48_00740 PF01645 Conserved region in glutamate synthase ATY48_00740 PF04898 Glutamate synthase central domain ATY48_00745 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY48_00745 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ATY48_00755 PF13936 Helix-turn-helix domain ATY48_00760 PF12760 Transposase zinc-ribbon domain ATY48_00760 PF12762 ATY48_00760 ATY48_00765 PF00665 Integrase core domain ATY48_00775 PF01609 Transposase DDE domain ATY48_00780 PF01609 Transposase DDE domain ATY48_00780 PF05598 ATY48_00780 ATY48_00785 PF04962 KduI/IolB family ATY48_00795 PF00356 Bacterial regulatory proteins, lacI family ATY48_00795 PF13377 Periplasmic binding protein-like domain ATY48_00810 PF12850 Calcineurin-like phosphoesterase superfamily domain ATY48_00815 PF00128 Alpha amylase, catalytic domain ATY48_00815 PF02806 Alpha amylase, C-terminal all-beta domain ATY48_00815 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ATY48_00820 PF00128 Alpha amylase, catalytic domain ATY48_00820 PF16657 ATY48_00820 ATY48_00825 PF00128 Alpha amylase, catalytic domain ATY48_00825 PF11896 Domain of unknown function (DUF3416) ATY48_00830 PF13276 ATY48_00830 ATY48_00830 PF13683 ATY48_00830 ATY48_00835 PF00872 ATY48_00835 ATY48_00845 PF00872 ATY48_00845 ATY48_00860 PF05598 ATY48_00860 ATY48_00865 PF01609 Transposase DDE domain ATY48_00870 PF13546 ATY48_00870 ATY48_00875 PF01078 Magnesium chelatase, subunit ChlI ATY48_00875 PF13335 ATY48_00875 ATY48_00875 PF13541 Subunit ChlI of Mg-chelatase ATY48_00880 PF04380 ATY48_00880 ATY48_00885 PF00543 Nitrogen regulatory protein P-II ATY48_00890 PF02838 Glycosyl hydrolase family 20, domain 2 ATY48_00890 PF07555 beta-N-acetylglucosaminidase ATY48_00895 PF13505 Outer membrane protein beta-barrel domain ATY48_00900 PF09851 ATY48_00900 ATY48_00900 PF14470 Bacterial PH domain ATY48_00905 PF01564 Spermine/spermidine synthase ATY48_00905 PF17284 ATY48_00905 ATY48_00910 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ATY48_00915 PF01609 Transposase DDE domain ATY48_00915 PF05598 ATY48_00915 ATY48_00920 PF05954 Phage late control gene D protein (GPD) ATY48_00920 PF10106 ATY48_00920 ATY48_00920 PF13296 ATY48_00920 ATY48_00925 PF11678 ATY48_00925 ATY48_00930 PF11394 ATY48_00930 ATY48_00935 PF05488 PAAR motif ATY48_00940 PF11678 ATY48_00940 ATY48_00945 PF11394 ATY48_00945 ATY48_00950 PF01134 Glucose inhibited division protein A ATY48_00950 PF13932 GidA associated domain 3 ATY48_00960 PF00291 Pyridoxal-phosphate dependent enzyme ATY48_00965 PF02698 DUF218 domain ATY48_00970 PF12680 SnoaL-like domain ATY48_00975 PF05118 Aspartyl/Asparaginyl beta-hydroxylase ATY48_00980 PF08241 Methyltransferase domain ATY48_00985 PF13561 Enoyl-(Acyl carrier protein) reductase ATY48_00990 PF12697 Alpha/beta hydrolase family ATY48_01000 PF13683 ATY48_01000 ATY48_01005 PF14315 ATY48_01005 ATY48_01010 PF04349 Periplasmic glucan biosynthesis protein, MdoG ATY48_01015 PF00512 His Kinase A (phospho-acceptor) domain ATY48_01015 PF01590 GAF domain ATY48_01020 PF00265 Thymidine kinase ATY48_01025 PF00580 UvrD/REP helicase N-terminal domain ATY48_01025 PF13361 UvrD-like helicase C-terminal domain ATY48_01035 PF04337 Protein of unknown function, DUF480 ATY48_01040 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) ATY48_01045 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ATY48_01050 PF04820 Tryptophan halogenase ATY48_01055 PF00593 TonB dependent receptor ATY48_01060 PF00593 TonB dependent receptor ATY48_01060 PF13620 Carboxypeptidase regulatory-like domain ATY48_01065 PF00356 Bacterial regulatory proteins, lacI family ATY48_01065 PF13377 Periplasmic binding protein-like domain ATY48_01075 PF01553 Acyltransferase ATY48_01085 PF04325 Protein of unknown function (DUF465) ATY48_01095 PF01527 Transposase ATY48_01105 PF02502 Ribose/Galactose Isomerase ATY48_01105 PF12408 Ribose-5-phosphate isomerase ATY48_01110 PF13472 GDSL-like Lipase/Acylhydrolase family ATY48_01115 PF14300 Domain of unknown function (DUF4375) ATY48_01120 PF00351 Biopterin-dependent aromatic amino acid hydroxylase ATY48_01125 PF01037 AsnC family ATY48_01125 PF13412 Winged helix-turn-helix DNA-binding ATY48_01135 PF07715 TonB-dependent Receptor Plug Domain ATY48_01140 PF00593 TonB dependent receptor ATY48_01150 PF05598 ATY48_01150 ATY48_01160 PF08212 Lipocalin-like domain ATY48_01165 PF01609 Transposase DDE domain ATY48_01165 PF05598 ATY48_01165 ATY48_01170 PF13546 ATY48_01170 ATY48_01180 PF00107 Zinc-binding dehydrogenase ATY48_01180 PF08240 Alcohol dehydrogenase GroES-like domain ATY48_01185 PF00150 Cellulase (glycosyl hydrolase family 5) ATY48_01190 PF00150 Cellulase (glycosyl hydrolase family 5) ATY48_01195 PF00150 Cellulase (glycosyl hydrolase family 5) ATY48_01200 PF13936 Helix-turn-helix domain ATY48_01220 PF01609 Transposase DDE domain ATY48_01220 PF05598 ATY48_01220 ATY48_01225 PF01263 Aldose 1-epimerase ATY48_01225 PF01471 Putative peptidoglycan binding domain ATY48_01225 PF13406 Transglycosylase SLT domain ATY48_01230 PF07690 Major Facilitator Superfamily ATY48_01235 PF01126 Heme oxygenase ATY48_01240 PF00360 Phytochrome region ATY48_01240 PF01590 GAF domain ATY48_01240 PF08446 PAS fold ATY48_01240 PF08448 PAS fold ATY48_01245 PF03594 ATY48_01245 ATY48_01250 PF03594 ATY48_01250 ATY48_01285 PF01527 Transposase ATY48_01290 PF12760 Transposase zinc-ribbon domain ATY48_01295 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ATY48_01295 PF06827 Zinc finger found in FPG and IleRS ATY48_01295 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ATY48_01300 PF12760 Transposase zinc-ribbon domain ATY48_01300 PF12762 ATY48_01300 ATY48_01305 PF13340 ATY48_01305 ATY48_01310 PF13586 ATY48_01310 ATY48_01315 PF05598 ATY48_01315 ATY48_01320 PF01609 Transposase DDE domain ATY48_01325 PF04333 ATY48_01325 ATY48_01330 PF13466 STAS domain ATY48_01335 PF05494 Toluene tolerance, Ttg2 ATY48_01340 PF02470 ATY48_01340 ATY48_01345 PF02405 ATY48_01345 ATY48_01350 PF00005 ABC transporter ATY48_01360 PF13508 Acetyltransferase (GNAT) domain ATY48_01365 PF12760 Transposase zinc-ribbon domain ATY48_01365 PF12762 ATY48_01365 ATY48_01375 PF00665 Integrase core domain ATY48_01375 PF13936 Helix-turn-helix domain ATY48_01380 PF13340 ATY48_01380 ATY48_01385 PF13586 ATY48_01385 ATY48_01390 PF01609 Transposase DDE domain ATY48_01395 PF01609 Transposase DDE domain ATY48_01400 PF01609 Transposase DDE domain ATY48_01405 PF01610 ATY48_01405 ATY48_01405 PF13542 ATY48_01405 ATY48_01410 PF00665 Integrase core domain ATY48_01410 PF13276 ATY48_01410 ATY48_01415 PF00285 Citrate synthase ATY48_01415 PF01527 Transposase ATY48_01435 PF13360 PQQ-like domain ATY48_01440 PF13340 ATY48_01440 ATY48_01445 PF13586 ATY48_01445 ATY48_01450 PF13671 AAA domain ATY48_01455 PF13347 MFS/sugar transport protein ATY48_01460 PF06165 Glycosyltransferase family 36 ATY48_01460 PF17167 ATY48_01460 ATY48_01465 PF15979 ATY48_01465 ATY48_01475 PF00072 Response regulator receiver domain ATY48_01475 PF00512 His Kinase A (phospho-acceptor) domain ATY48_01475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_01475 PF12860 ATY48_01475 ATY48_01480 PF02659 ATY48_01480 ATY48_01485 PF01614 Bacterial transcriptional regulator ATY48_01485 PF09339 IclR helix-turn-helix domain ATY48_01490 PF07690 Major Facilitator Superfamily ATY48_01495 PF05336 Domain of unknown function (DUF718) ATY48_01500 PF05598 ATY48_01500 ATY48_01505 PF12760 Transposase zinc-ribbon domain ATY48_01505 PF12762 ATY48_01505 ATY48_01520 PF01432 Peptidase family M3 ATY48_01530 PF01553 Acyltransferase ATY48_01535 PF00472 RF-1 domain ATY48_01540 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) ATY48_01545 PF00849 RNA pseudouridylate synthase ATY48_01550 PF07883 Cupin domain ATY48_01555 PF03109 ATY48_01555 ATY48_01560 PF02036 SCP-2 sterol transfer family ATY48_01575 PF01609 Transposase DDE domain ATY48_01580 PF05598 ATY48_01580 ATY48_01590 PF01609 Transposase DDE domain ATY48_01595 PF13586 ATY48_01595 ATY48_01600 PF13340 ATY48_01600 ATY48_01605 PF01527 Transposase ATY48_01620 PF13546 ATY48_01620 ATY48_01625 PF12760 Transposase zinc-ribbon domain ATY48_01625 PF12762 ATY48_01625 ATY48_01635 PF01609 Transposase DDE domain ATY48_01635 PF05598 ATY48_01635 ATY48_01650 PF02558 Ketopantoate reductase PanE/ApbA ATY48_01650 PF08546 Ketopantoate reductase PanE/ApbA C terminal ATY48_01655 PF12686 ATY48_01655 ATY48_01660 PF01061 ATY48_01660 ATY48_01665 PF00005 ABC transporter ATY48_01670 PF00175 Oxidoreductase NAD-binding domain ATY48_01670 PF00970 Oxidoreductase FAD-binding domain ATY48_01675 PF01545 Cation efflux family ATY48_01680 PF02583 Metal-sensitive transcriptional repressor ATY48_01690 PF01381 Helix-turn-helix ATY48_01695 PF08386 TAP-like protein ATY48_01700 PF00005 ABC transporter ATY48_01705 PF12679 ATY48_01705 ATY48_01710 PF03544 Gram-negative bacterial TonB protein C-terminal ATY48_01715 PF04820 Tryptophan halogenase ATY48_01720 PF13621 Cupin-like domain ATY48_01725 PF07277 ATY48_01725 ATY48_01730 PF00593 TonB dependent receptor ATY48_01730 PF07715 TonB-dependent Receptor Plug Domain ATY48_01735 PF00043 Glutathione S-transferase, C-terminal domain ATY48_01735 PF02798 Glutathione S-transferase, N-terminal domain ATY48_01740 PF00326 Prolyl oligopeptidase family ATY48_01740 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ATY48_01745 PF05960 Bacterial protein of unknown function (DUF885) ATY48_01760 PF00490 Delta-aminolevulinic acid dehydratase ATY48_01770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY48_01770 PF03466 LysR substrate binding domain ATY48_01775 PF01223 DNA/RNA non-specific endonuclease ATY48_01780 PF00175 Oxidoreductase NAD-binding domain ATY48_01780 PF00258 Flavodoxin ATY48_01780 PF03929 ATY48_01780 ATY48_01785 PF07676 WD40-like Beta Propeller Repeat ATY48_01790 PF01488 Shikimate / quinate 5-dehydrogenase ATY48_01790 PF08501 Shikimate dehydrogenase substrate binding domain ATY48_01800 PF13307 Helicase C-terminal domain ATY48_01810 PF12760 Transposase zinc-ribbon domain ATY48_01810 PF12762 ATY48_01810 ATY48_01820 PF13437 HlyD family secretion protein ATY48_01825 PF00199 Catalase ATY48_01825 PF06628 Catalase-related immune-responsive ATY48_01830 PF12796 Ankyrin repeats (3 copies) ATY48_01845 PF01207 Dihydrouridine synthase (Dus) ATY48_01855 PF00072 Response regulator receiver domain ATY48_01855 PF00486 Transcriptional regulatory protein, C terminal ATY48_01860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_01865 PF08811 ATY48_01865 ATY48_01870 PF07394 ATY48_01870 ATY48_01885 PF02237 Biotin protein ligase C terminal domain ATY48_01885 PF03099 Biotin/lipoate A/B protein ligase family ATY48_01885 PF08279 HTH domain ATY48_01890 PF03309 Type III pantothenate kinase ATY48_01895 PF05036 Sporulation related domain ATY48_01905 PF02223 Thymidylate kinase ATY48_01925 PF00491 Arginase family ATY48_01930 PF08085 ATY48_01930 ATY48_01935 PF08085 ATY48_01935 ATY48_01940 PF05532 CsbD-like ATY48_01945 PF00579 tRNA synthetases class I (W and Y) ATY48_01945 PF07411 Domain of unknown function (DUF1508) ATY48_01950 PF00753 Metallo-beta-lactamase superfamily ATY48_01955 PF02225 PA domain ATY48_01955 PF04389 Peptidase family M28 ATY48_01965 PF00892 EamA-like transporter family ATY48_01970 PF00892 EamA-like transporter family ATY48_01975 PF00892 EamA-like transporter family ATY48_01980 PF12697 Alpha/beta hydrolase family ATY48_01990 PF01292 Prokaryotic cytochrome b561 ATY48_01995 PF00199 Catalase ATY48_02000 PF04542 Sigma-70 region 2 ATY48_02000 PF08281 Sigma-70, region 4 ATY48_02010 PF00883 Cytosol aminopeptidase family, catalytic domain ATY48_02015 PF13419 Haloacid dehalogenase-like hydrolase ATY48_02020 PF01594 ATY48_02020 ATY48_02030 PF01040 UbiA prenyltransferase family ATY48_02035 PF00156 Phosphoribosyl transferase domain ATY48_02040 PF04055 Radical SAM superfamily ATY48_02040 PF06968 Biotin and Thiamin Synthesis associated domain ATY48_02045 PF00155 Aminotransferase class I and II ATY48_02050 PF13358 DDE superfamily endonuclease ATY48_02050 PF13551 Winged helix-turn helix ATY48_02050 PF13592 ATY48_02050 ATY48_02055 PF13561 Enoyl-(Acyl carrier protein) reductase ATY48_02065 PF01494 FAD binding domain ATY48_02070 PF00535 Glycosyl transferase family 2 ATY48_02075 PF13723 ATY48_02075 ATY48_02080 PF00109 Beta-ketoacyl synthase, N-terminal domain ATY48_02080 PF02801 Beta-ketoacyl synthase, C-terminal domain ATY48_02085 PF05166 YcgL domain ATY48_02090 PF00023 Ankyrin repeat ATY48_02090 PF12796 Ankyrin repeats (3 copies) ATY48_02100 PF00723 Glycosyl hydrolases family 15 ATY48_02105 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ATY48_02105 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ATY48_02110 PF13546 ATY48_02110 ATY48_02115 PF00999 Sodium/hydrogen exchanger family ATY48_02115 PF02254 TrkA-N domain ATY48_02120 PF00571 CBS domain ATY48_02120 PF01769 Divalent cation transporter ATY48_02120 PF03448 MgtE intracellular N domain ATY48_02130 PF13302 Acetyltransferase (GNAT) domain ATY48_02130 PF13380 CoA binding domain ATY48_02130 PF13549 ATP-grasp domain ATY48_02130 PF13607 Succinyl-CoA ligase like flavodoxin domain ATY48_02135 PF04332 ATY48_02135 ATY48_02140 PF00317 Ribonucleotide reductase, all-alpha domain ATY48_02140 PF02867 Ribonucleotide reductase, barrel domain ATY48_02145 PF00268 Ribonucleotide reductase, small chain ATY48_02150 PF06114 Domain of unknown function (DUF955) ATY48_02160 PF00085 Thioredoxin ATY48_02165 PF01527 Transposase ATY48_02170 PF13276 ATY48_02170 ATY48_02170 PF13683 ATY48_02170 ATY48_02180 PF00108 Thiolase, N-terminal domain ATY48_02180 PF02803 Thiolase, C-terminal domain ATY48_02185 PF00775 Dioxygenase ATY48_02185 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal ATY48_02190 PF00775 Dioxygenase ATY48_02195 PF00206 Lyase ATY48_02195 PF10397 Adenylosuccinate lyase C-terminus ATY48_02200 PF00561 alpha/beta hydrolase fold ATY48_02205 PF02627 Carboxymuconolactone decarboxylase family ATY48_02210 PF12146 Putative lysophospholipase ATY48_02215 PF01614 Bacterial transcriptional regulator ATY48_02215 PF09339 IclR helix-turn-helix domain ATY48_02220 PF01163 RIO1 family ATY48_02225 PF13936 Helix-turn-helix domain ATY48_02230 PF00106 short chain dehydrogenase ATY48_02240 PF05036 Sporulation related domain ATY48_02245 PF00750 tRNA synthetases class I (R) ATY48_02245 PF03485 Arginyl tRNA synthetase N terminal domain ATY48_02245 PF05746 DALR anticodon binding domain ATY48_02250 PF04002 RadC-like JAB domain ATY48_02255 PF02441 Flavoprotein ATY48_02255 PF04127 DNA / pantothenate metabolism flavoprotein ATY48_02260 PF00692 dUTPase ATY48_02265 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ATY48_02265 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ATY48_02265 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ATY48_02265 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ATY48_02275 PF07578 Lipid A Biosynthesis N-terminal domain ATY48_02280 PF00535 Glycosyl transferase family 2 ATY48_02285 PF01370 NAD dependent epimerase/dehydratase family ATY48_02290 PF11731 ATY48_02290 ATY48_02295 PF02195 ParB-like nuclease domain ATY48_02300 PF13614 AAA domain ATY48_02310 PF00156 Phosphoribosyl transferase domain ATY48_02315 PF03372 Endonuclease/Exonuclease/phosphatase family ATY48_02320 PF07690 Major Facilitator Superfamily ATY48_02330 PF03702 Uncharacterised protein family (UPF0075) ATY48_02335 PF01551 Peptidase family M23 ATY48_02335 PF04225 Opacity-associated protein A LysM-like domain ATY48_02340 PF00579 tRNA synthetases class I (W and Y) ATY48_02375 PF01527 Transposase ATY48_02380 PF00072 Response regulator receiver domain ATY48_02380 PF00512 His Kinase A (phospho-acceptor) domain ATY48_02380 PF01627 Hpt domain ATY48_02380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_02385 PF00072 Response regulator receiver domain ATY48_02385 PF00563 EAL domain ATY48_02385 PF00990 GGDEF domain ATY48_02390 PF13548 ATY48_02390 ATY48_02400 PF04519 ATY48_02400 ATY48_02405 PF04519 ATY48_02405 ATY48_02410 PF13340 ATY48_02410 ATY48_02415 PF13586 ATY48_02415 ATY48_02420 PF01521 Iron-sulphur cluster biosynthesis ATY48_02425 PF03583 Secretory lipase ATY48_02430 PF00293 NUDIX domain ATY48_02430 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain ATY48_02430 PF09297 NADH pyrophosphatase zinc ribbon domain ATY48_02435 PF03186 ATY48_02435 ATY48_02445 PF04505 ATY48_02445 ATY48_02455 PF01553 Acyltransferase ATY48_02455 PF07690 Major Facilitator Superfamily ATY48_02470 PF12805 ATY48_02470 ATY48_02470 PF13515 ATY48_02470 ATY48_02475 PF14103 ATY48_02475 ATY48_02480 PF13304 AAA domain ATY48_02485 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATY48_02485 PF02843 Phosphoribosylglycinamide synthetase, C domain ATY48_02485 PF02844 Phosphoribosylglycinamide synthetase, N domain ATY48_02490 PF14103 ATY48_02490 ATY48_02495 PF01808 AICARFT/IMPCHase bienzyme ATY48_02495 PF02142 MGS-like domain ATY48_02505 PF12146 Putative lysophospholipase ATY48_02515 PF12147 ATY48_02515 ATY48_02525 PF12760 Transposase zinc-ribbon domain ATY48_02525 PF12762 ATY48_02525 ATY48_02530 PF02954 Bacterial regulatory protein, Fis family ATY48_02535 PF11906 ATY48_02535 ATY48_02540 PF01381 Helix-turn-helix ATY48_02550 PF06325 Ribosomal protein L11 methyltransferase (PrmA) ATY48_02565 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain ATY48_02565 PF02785 Biotin carboxylase C-terminal domain ATY48_02565 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ATY48_02570 PF05635 23S rRNA-intervening sequence protein ATY48_02575 PF00364 Biotin-requiring enzyme ATY48_02580 PF01220 Dehydroquinase class II ATY48_02590 PF02683 ATY48_02590 ATY48_02590 PF11412 Disulphide bond corrector protein DsbC ATY48_02590 PF13899 Thioredoxin-like ATY48_02595 PF03091 CutA1 divalent ion tolerance protein ATY48_02600 PF12760 Transposase zinc-ribbon domain ATY48_02600 PF12762 ATY48_02600 ATY48_02605 PF13546 ATY48_02605 ATY48_02610 PF01548 ATY48_02610 ATY48_02615 PF00270 DEAD/DEAH box helicase ATY48_02615 PF00271 Helicase conserved C-terminal domain ATY48_02625 PF11304 ATY48_02625 ATY48_02640 PF01554 MatE ATY48_02645 PF01343 Peptidase family S49 ATY48_02655 PF13561 Enoyl-(Acyl carrier protein) reductase ATY48_02670 PF01300 Telomere recombination ATY48_02675 PF01131 DNA topoisomerase ATY48_02675 PF01751 Toprim domain ATY48_02675 PF13368 ATY48_02675 ATY48_02680 PF06271 ATY48_02680 ATY48_02680 PF14237 ATY48_02680 ATY48_02685 PF00114 Pilin (bacterial filament) ATY48_02685 PF14237 ATY48_02685 ATY48_02690 PF04361 ATY48_02690 ATY48_02695 PF02481 DNA recombination-mediator protein A ATY48_02700 PF01476 LysM domain ATY48_02705 PF01327 Polypeptide deformylase ATY48_02710 PF00551 Formyl transferase ATY48_02710 PF02911 Formyl transferase, C-terminal domain ATY48_02715 PF01029 NusB family ATY48_02715 PF01189 NOL1/NOP2/sun family ATY48_02720 PF13231 ATY48_02720 ATY48_02725 PF04932 ATY48_02725 ATY48_02730 PF00535 Glycosyl transferase family 2 ATY48_02735 PF02350 UDP-N-acetylglucosamine 2-epimerase ATY48_02740 PF03703 ATY48_02740 ATY48_02745 PF03703 ATY48_02745 ATY48_02750 PF00925 GTP cyclohydrolase II ATY48_02755 PF13420 Acetyltransferase (GNAT) domain ATY48_02760 PF03279 ATY48_02760 ATY48_02765 PF02580 D-Tyr-tRNA(Tyr) deacylase ATY48_02770 PF00140 Sigma-70 factor, region 1 ATY48_02770 PF03979 Sigma-70 factor, region 1 ATY48_02770 PF04539 Sigma-70 region 3 ATY48_02770 PF04542 Sigma-70 region 2 ATY48_02770 PF04545 Sigma-70, region 4 ATY48_02770 PF04546 Sigma-70, non-essential region ATY48_02785 PF00589 Phage integrase family ATY48_02795 PF13730 ATY48_02795 ATY48_02805 PF07996 Type IV secretion system proteins ATY48_02820 PF04610 ATY48_02820 ATY48_02835 PF03852 DNA mismatch endonuclease Vsr ATY48_02840 PF00145 C-5 cytosine-specific DNA methylase ATY48_02885 PF01610 ATY48_02885 ATY48_02885 PF13542 ATY48_02885 ATY48_02900 PF12760 Transposase zinc-ribbon domain ATY48_02900 PF12762 ATY48_02900 ATY48_02905 PF13936 Helix-turn-helix domain ATY48_02910 PF13683 ATY48_02910 ATY48_02915 PF00005 ABC transporter ATY48_02920 PF12040 ATY48_02920 ATY48_02920 PF12679 ATY48_02920 ATY48_02925 PF12040 ATY48_02925 ATY48_02930 PF00593 TonB dependent receptor ATY48_02930 PF07715 TonB-dependent Receptor Plug Domain ATY48_02935 PF11445 ATY48_02935 ATY48_02940 PF00691 OmpA family ATY48_02945 PF05650 ATY48_02945 ATY48_02950 PF11828 ATY48_02950 ATY48_02965 PF03692 ATY48_02965 ATY48_02975 PF01609 Transposase DDE domain ATY48_02980 PF02322 ATY48_02980 ATY48_02985 PF01654 ATY48_02985 ATY48_02990 PF00072 Response regulator receiver domain ATY48_02990 PF00158 Sigma-54 interaction domain ATY48_02990 PF02954 Bacterial regulatory protein, Fis family ATY48_03005 PF01339 CheB methylesterase ATY48_03005 PF01739 CheR methyltransferase, SAM binding domain ATY48_03005 PF03705 CheR methyltransferase, all-alpha domain ATY48_03015 PF01266 FAD dependent oxidoreductase ATY48_03025 PF06580 ATY48_03025 ATY48_03030 PF00072 Response regulator receiver domain ATY48_03035 PF04397 LytTr DNA-binding domain ATY48_03045 PF13520 Amino acid permease ATY48_03055 PF09995 ATY48_03055 ATY48_03060 PF01431 Peptidase family M13 ATY48_03060 PF05649 Peptidase family M13 ATY48_03065 PF00535 Glycosyl transferase family 2 ATY48_03075 PF00248 Aldo/keto reductase family ATY48_03080 PF03358 NADPH-dependent FMN reductase ATY48_03085 PF07681 ATY48_03085 ATY48_03090 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ATY48_03095 PF04055 Radical SAM superfamily ATY48_03100 PF03167 Uracil DNA glycosylase superfamily ATY48_03100 PF13566 ATY48_03100 ATY48_03105 PF02469 Fasciclin domain ATY48_03120 PF00999 Sodium/hydrogen exchanger family ATY48_03125 PF00005 ABC transporter ATY48_03130 PF01061 ATY48_03130 ATY48_03140 PF11730 ATY48_03140 ATY48_03150 PF00082 Subtilase family ATY48_03150 PF04151 Bacterial pre-peptidase C-terminal domain ATY48_03155 PF03895 YadA-like C-terminal region ATY48_03155 PF05658 Head domain of trimeric autotransporter adhesin ATY48_03155 PF05662 Coiled stalk of trimeric autotransporter adhesin ATY48_03160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_03165 PF00072 Response regulator receiver domain ATY48_03165 PF00486 Transcriptional regulatory protein, C terminal ATY48_03170 PF13223 ATY48_03170 ATY48_03180 PF00691 OmpA family ATY48_03180 PF13677 ATY48_03180 ATY48_03185 PF01618 ATY48_03185 ATY48_03190 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme ATY48_03195 PF01641 SelR domain ATY48_03205 PF01037 AsnC family ATY48_03205 PF13404 AsnC-type helix-turn-helix domain ATY48_03210 PF01266 FAD dependent oxidoreductase ATY48_03215 PF00842 Alanine racemase, C-terminal domain ATY48_03215 PF01168 Alanine racemase, N-terminal domain ATY48_03220 PF11454 ATY48_03220 ATY48_03235 PF00072 Response regulator receiver domain ATY48_03235 PF00512 His Kinase A (phospho-acceptor) domain ATY48_03235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_03235 PF08448 PAS fold ATY48_03235 PF13188 PAS domain ATY48_03240 PF11607 Protein of unknown function (DUF3247) ATY48_03245 PF07995 Glucose / Sorbosone dehydrogenase ATY48_03260 PF05175 Methyltransferase small domain ATY48_03265 PF00849 RNA pseudouridylate synthase ATY48_03270 PF13419 Haloacid dehalogenase-like hydrolase ATY48_03275 PF13561 Enoyl-(Acyl carrier protein) reductase ATY48_03280 PF07209 ATY48_03280 ATY48_03300 PF04461 Protein of unknown function (DUF520) ATY48_03305 PF00892 EamA-like transporter family ATY48_03310 PF00005 ABC transporter ATY48_03310 PF09383 NIL domain ATY48_03315 PF00528 Binding-protein-dependent transport system inner membrane component ATY48_03320 PF03180 NLPA lipoprotein ATY48_03325 PF07301 ATY48_03325 ATY48_03330 PF03922 OmpW family ATY48_03335 PF03167 Uracil DNA glycosylase superfamily ATY48_03340 PF11101 ATY48_03340 ATY48_03345 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ATY48_03345 PF00364 Biotin-requiring enzyme ATY48_03345 PF02817 e3 binding domain ATY48_03355 PF00364 Biotin-requiring enzyme ATY48_03355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ATY48_03355 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY48_03375 PF00119 ATP synthase A chain ATY48_03380 PF00137 ATP synthase subunit C ATY48_03385 PF00430 ATP synthase B/B' CF(0) ATY48_03390 PF00213 ATP synthase delta (OSCP) subunit ATY48_03395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATY48_03395 PF00306 ATP synthase alpha/beta chain, C terminal domain ATY48_03395 PF02874 ATP synthase alpha/beta family, beta-barrel domain ATY48_03400 PF00231 ATP synthase ATY48_03405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATY48_03405 PF02874 ATP synthase alpha/beta family, beta-barrel domain ATY48_03410 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ATY48_03415 PF01817 Chorismate mutase type II ATY48_03420 PF04138 ATY48_03420 ATY48_03425 PF00132 Bacterial transferase hexapeptide (six repeats) ATY48_03425 PF12804 MobA-like NTP transferase domain ATY48_03425 PF14602 Hexapeptide repeat of succinyl-transferase ATY48_03430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_03435 PF13340 ATY48_03435 ATY48_03440 PF12760 Transposase zinc-ribbon domain ATY48_03440 PF12762 ATY48_03440 ATY48_03450 PF13586 ATY48_03450 ATY48_03460 PF00005 ABC transporter ATY48_03465 PF16576 ATY48_03465 ATY48_03470 PF01380 SIS domain ATY48_03470 PF13522 Glutamine amidotransferase domain ATY48_03485 PF13340 ATY48_03485 ATY48_03490 PF13586 ATY48_03490 ATY48_03495 PF13358 DDE superfamily endonuclease ATY48_03495 PF13551 Winged helix-turn helix ATY48_03495 PF13592 ATY48_03495 ATY48_03500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ATY48_03505 PF05275 ATY48_03505 ATY48_03510 PF00394 Multicopper oxidase ATY48_03510 PF07731 Multicopper oxidase ATY48_03510 PF07732 Multicopper oxidase ATY48_03520 PF00291 Pyridoxal-phosphate dependent enzyme ATY48_03525 PF01432 Peptidase family M3 ATY48_03535 PF00109 Beta-ketoacyl synthase, N-terminal domain ATY48_03535 PF02801 Beta-ketoacyl synthase, C-terminal domain ATY48_03540 PF07977 FabA-like domain ATY48_03545 PF00817 impB/mucB/samB family ATY48_03545 PF11799 impB/mucB/samB family C-terminal domain ATY48_03550 PF13419 Haloacid dehalogenase-like hydrolase ATY48_03555 PF04994 TfoX C-terminal domain ATY48_03560 PF13185 GAF domain ATY48_03565 PF13500 AAA domain ATY48_03570 PF09361 ATY48_03570 ATY48_03575 PF01242 6-pyruvoyl tetrahydropterin synthase ATY48_03585 PF00270 DEAD/DEAH box helicase ATY48_03585 PF00271 Helicase conserved C-terminal domain ATY48_03590 PF01557 Fumarylacetoacetate (FAA) hydrolase family ATY48_03595 PF13417 Glutathione S-transferase, N-terminal domain ATY48_03600 PF00437 Type II/IV secretion system protein ATY48_03605 PF14346 Domain of unknown function (DUF4398) ATY48_03615 PF04325 Protein of unknown function (DUF465) ATY48_03620 PF00291 Pyridoxal-phosphate dependent enzyme ATY48_03620 PF00571 CBS domain ATY48_03625 PF01053 Cys/Met metabolism PLP-dependent enzyme ATY48_03630 PF05050 Methyltransferase FkbM domain ATY48_03635 PF01370 NAD dependent epimerase/dehydratase family ATY48_03640 PF00534 Glycosyl transferases group 1 ATY48_03655 PF01757 ATY48_03655 ATY48_03660 PF13546 ATY48_03660 ATY48_03665 PF00872 ATY48_03665 ATY48_03675 PF00005 ABC transporter ATY48_03675 PF14524 Wzt C-terminal domain ATY48_03680 PF01061 ATY48_03680 ATY48_03685 PF00766 Electron transfer flavoprotein FAD-binding domain ATY48_03685 PF01012 Electron transfer flavoprotein domain ATY48_03690 PF01012 Electron transfer flavoprotein domain ATY48_03695 PF16363 ATY48_03695 ATY48_03700 PF00483 Nucleotidyl transferase ATY48_03705 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ATY48_03710 PF04321 RmlD substrate binding domain ATY48_03715 PF00483 Nucleotidyl transferase ATY48_03715 PF01050 Mannose-6-phosphate isomerase ATY48_03720 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ATY48_03720 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ATY48_03720 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ATY48_03720 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ATY48_03725 PF01144 Coenzyme A transferase ATY48_03730 PF01144 Coenzyme A transferase ATY48_03735 PF05045 ATY48_03735 ATY48_03735 PF14307 ATY48_03735 ATY48_03740 PF01946 Thi4 family ATY48_03740 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase ATY48_03745 PF13532 2OG-Fe(II) oxygenase superfamily ATY48_03750 PF03886 Protein of unknown function (DUF330) ATY48_03755 PF02470 ATY48_03755 ATY48_03760 PF00005 ABC transporter ATY48_03765 PF02405 ATY48_03765 ATY48_03770 PF06738 ATY48_03770 ATY48_03770 PF12821 ATY48_03770 ATY48_03775 PF00816 H-NS histone family ATY48_03780 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ATY48_03780 PF03129 Anticodon binding domain ATY48_03780 PF04073 Aminoacyl-tRNA editing domain ATY48_03785 PF13511 ATY48_03785 ATY48_03790 PF01066 CDP-alcohol phosphatidyltransferase ATY48_03800 PF00583 Acetyltransferase (GNAT) family ATY48_03805 PF13546 ATY48_03805 ATY48_03810 PF13546 ATY48_03810 ATY48_03815 PF01609 Transposase DDE domain ATY48_03815 PF05598 ATY48_03815 ATY48_03820 PF13546 ATY48_03820 ATY48_03825 PF01464 Transglycosylase SLT domain ATY48_03825 PF14718 Soluble lytic murein transglycosylase L domain ATY48_03830 PF00544 Pectate lyase ATY48_03835 PF13546 ATY48_03835 ATY48_03840 PF13340 ATY48_03840 ATY48_03845 PF01609 Transposase DDE domain ATY48_03850 PF01609 Transposase DDE domain ATY48_03855 PF13276 ATY48_03855 ATY48_03855 PF13683 ATY48_03855 ATY48_03860 PF01527 Transposase ATY48_03865 PF04191 Phospholipid methyltransferase ATY48_03870 PF00133 tRNA synthetases class I (I, L, M and V) ATY48_03870 PF08264 Anticodon-binding domain of tRNA ATY48_03870 PF10458 Valyl tRNA synthetase tRNA binding arm ATY48_03875 PF04364 DNA polymerase III chi subunit, HolC ATY48_03885 PF00883 Cytosol aminopeptidase family, catalytic domain ATY48_03885 PF02789 Cytosol aminopeptidase family, N-terminal domain ATY48_03890 PF03739 ATY48_03890 ATY48_03895 PF03739 ATY48_03895 ATY48_03900 PF06271 ATY48_03900 ATY48_03905 PF00589 Phage integrase family ATY48_03905 PF02899 Phage integrase, N-terminal SAM-like domain ATY48_03910 PF10411 Disulfide bond isomerase protein N-terminus ATY48_03910 PF13098 Thioredoxin-like domain ATY48_03920 PF02769 AIR synthase related protein, C-terminal domain ATY48_03920 PF13507 CobB/CobQ-like glutamine amidotransferase domain ATY48_03925 PF03895 YadA-like C-terminal region ATY48_03925 PF05658 Head domain of trimeric autotransporter adhesin ATY48_03925 PF05662 Coiled stalk of trimeric autotransporter adhesin ATY48_03925 PF13018 ATY48_03925 ATY48_03935 PF00665 Integrase core domain ATY48_03935 PF13936 Helix-turn-helix domain ATY48_03945 PF00437 Type II/IV secretion system protein ATY48_03945 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ATY48_03955 PF00482 Type II secretion system (T2SS), protein F ATY48_03960 PF08334 Type II secretion system (T2SS), protein G ATY48_03965 PF12019 Type II transport protein GspH ATY48_03970 PF07963 Prokaryotic N-terminal methylation motif ATY48_03980 PF03934 Type II secretion system (T2SS), protein K ATY48_03985 PF05137 ATY48_03985 ATY48_03990 PF10741 ATY48_03990 ATY48_04000 PF00263 ATY48_04000 ATY48_04000 PF03958 Bacterial type II/III secretion system short domain ATY48_04010 PF00392 Bacterial regulatory proteins, gntR family ATY48_04010 PF07702 UTRA domain ATY48_04015 PF04973 ATY48_04015 ATY48_04020 PF00593 TonB dependent receptor ATY48_04020 PF07715 TonB-dependent Receptor Plug Domain ATY48_04025 PF01636 Phosphotransferase enzyme family ATY48_04030 PF00535 Glycosyl transferase family 2 ATY48_04040 PF13358 DDE superfamily endonuclease ATY48_04045 PF09827 CRISPR associated protein Cas2 ATY48_04050 PF01867 CRISPR associated protein Cas1 ATY48_04055 PF01930 Domain of unknown function DUF83 ATY48_04060 PF05107 ATY48_04060 ATY48_04065 PF09709 ATY48_04065 ATY48_04070 PF09704 CRISPR-associated protein (Cas_Cas5) ATY48_04075 PF00270 DEAD/DEAH box helicase ATY48_04080 PF12760 Transposase zinc-ribbon domain ATY48_04080 PF12762 ATY48_04080 ATY48_04085 PF02545 Maf-like protein ATY48_04090 PF02620 ATY48_04090 ATY48_04095 PF01783 Ribosomal L32p protein family ATY48_04100 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ATY48_04100 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ATY48_04105 PF08670 ATY48_04105 ATY48_04110 PF00698 Acyl transferase domain ATY48_04115 PF13561 Enoyl-(Acyl carrier protein) reductase ATY48_04120 PF00550 Phosphopantetheine attachment site ATY48_04125 PF00109 Beta-ketoacyl synthase, N-terminal domain ATY48_04125 PF02801 Beta-ketoacyl synthase, C-terminal domain ATY48_04130 PF00425 chorismate binding enzyme ATY48_04130 PF04715 Anthranilate synthase component I, N terminal region ATY48_04135 PF02618 YceG-like family ATY48_04140 PF13177 DNA polymerase III, delta subunit ATY48_04145 PF07238 PilZ domain ATY48_04160 PF00158 Sigma-54 interaction domain ATY48_04160 PF02954 Bacterial regulatory protein, Fis family ATY48_04160 PF06506 Propionate catabolism activator ATY48_04165 PF13714 Phosphoenolpyruvate phosphomutase ATY48_04170 PF00285 Citrate synthase ATY48_04175 PF00330 Aconitase family (aconitate hydratase) ATY48_04175 PF00694 Aconitase C-terminal domain ATY48_04180 PF04303 PrpF protein ATY48_04185 PF01609 Transposase DDE domain ATY48_04185 PF05598 ATY48_04185 ATY48_04190 PF00593 TonB dependent receptor ATY48_04190 PF07715 TonB-dependent Receptor Plug Domain ATY48_04195 PF01156 Inosine-uridine preferring nucleoside hydrolase ATY48_04205 PF00593 TonB dependent receptor ATY48_04205 PF07715 TonB-dependent Receptor Plug Domain ATY48_04210 PF03009 Glycerophosphoryl diester phosphodiesterase family ATY48_04210 PF16387 ATY48_04210 ATY48_04225 PF00665 Integrase core domain ATY48_04230 PF00210 Ferritin-like domain ATY48_04235 PF08534 Redoxin ATY48_04240 PF00011 Hsp20/alpha crystallin family ATY48_04245 PF00226 DnaJ domain ATY48_04245 PF01556 DnaJ C terminal domain ATY48_04250 PF00072 Response regulator receiver domain ATY48_04255 PF01145 SPFH domain / Band 7 family ATY48_04260 PF01145 SPFH domain / Band 7 family ATY48_04265 PF09838 ATY48_04265 ATY48_04270 PF00709 Adenylosuccinate synthetase ATY48_04275 PF01433 Peptidase family M1 ATY48_04275 PF11838 ERAP1-like C-terminal domain ATY48_04285 PF01609 Transposase DDE domain ATY48_04285 PF05598 ATY48_04285 ATY48_04300 PF01609 Transposase DDE domain ATY48_04300 PF05598 ATY48_04300 ATY48_04305 PF10276 Zinc-finger domain ATY48_04310 PF00534 Glycosyl transferases group 1 ATY48_04310 PF13439 Glycosyltransferase Family 4 ATY48_04315 PF04932 ATY48_04315 ATY48_04320 PF03279 ATY48_04320 ATY48_04325 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ATY48_04330 PF02321 Outer membrane efflux protein ATY48_04335 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) ATY48_04340 PF00440 Bacterial regulatory proteins, tetR family ATY48_04340 PF14246 AefR-like transcriptional repressor, C-terminal region ATY48_04345 PF07494 Two component regulator propeller ATY48_04355 PF00990 GGDEF domain ATY48_04360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY48_04360 PF03466 LysR substrate binding domain ATY48_04365 PF00330 Aconitase family (aconitate hydratase) ATY48_04370 PF00694 Aconitase C-terminal domain ATY48_04380 PF00180 Isocitrate/isopropylmalate dehydrogenase ATY48_04385 PF00682 HMGL-like ATY48_04385 PF08502 LeuA allosteric (dimerisation) domain ATY48_04390 PF00291 Pyridoxal-phosphate dependent enzyme ATY48_04395 PF13710 ACT domain ATY48_04400 PF00205 Thiamine pyrophosphate enzyme, central domain ATY48_04400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ATY48_04400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ATY48_04405 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ATY48_04405 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain ATY48_04410 PF01964 ThiC family ATY48_04410 PF13667 ThiC-associated domain ATY48_04415 PF00486 Transcriptional regulatory protein, C terminal ATY48_04415 PF07676 WD40-like Beta Propeller Repeat ATY48_04420 PF12833 Helix-turn-helix domain ATY48_04425 PF00593 TonB dependent receptor ATY48_04425 PF07715 TonB-dependent Receptor Plug Domain ATY48_04430 PF08668 HDOD domain ATY48_04435 PF00719 Inorganic pyrophosphatase ATY48_04450 PF12760 Transposase zinc-ribbon domain ATY48_04450 PF12762 ATY48_04450 ATY48_04460 PF12762 ATY48_04460 ATY48_04465 PF12760 Transposase zinc-ribbon domain ATY48_04470 PF00365 Phosphofructokinase ATY48_04475 PF00406 Adenylate kinase ATY48_04480 PF01225 Mur ligase family, catalytic domain ATY48_04480 PF02875 Mur ligase family, glutamate ligase domain ATY48_04480 PF08245 Mur ligase middle domain ATY48_04485 PF02190 ATP-dependent protease La (LON) domain ATY48_04490 PF01062 ATY48_04490 ATY48_04495 PF01609 Transposase DDE domain ATY48_04505 PF00043 Glutathione S-transferase, C-terminal domain ATY48_04505 PF02798 Glutathione S-transferase, N-terminal domain ATY48_04510 PF00056 lactate/malate dehydrogenase, NAD binding domain ATY48_04510 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ATY48_04515 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ATY48_04520 PF00009 Elongation factor Tu GTP binding domain ATY48_04520 PF00679 Elongation factor G C-terminus ATY48_04520 PF03144 Elongation factor Tu domain 2 ATY48_04525 PF09900 ATY48_04525 ATY48_04530 PF01425 Amidase ATY48_04535 PF00924 Mechanosensitive ion channel ATY48_04540 PF01474 Class-II DAHP synthetase family ATY48_04545 PF00593 TonB dependent receptor ATY48_04545 PF07715 TonB-dependent Receptor Plug Domain ATY48_04550 PF02600 Disulfide bond formation protein DsbB ATY48_04560 PF01527 Transposase ATY48_04565 PF13276 ATY48_04565 ATY48_04565 PF13683 ATY48_04565 ATY48_04575 PF01610 ATY48_04575 ATY48_04575 PF13542 ATY48_04575 ATY48_04580 PF01609 Transposase DDE domain ATY48_04585 PF00089 Trypsin ATY48_04600 PF12760 Transposase zinc-ribbon domain ATY48_04600 PF12762 ATY48_04600 ATY48_04610 PF00665 Integrase core domain ATY48_04620 PF01610 ATY48_04620 ATY48_04620 PF13542 ATY48_04620 ATY48_04630 PF13546 ATY48_04630 ATY48_04640 PF01527 Transposase ATY48_04645 PF00665 Integrase core domain ATY48_04645 PF13936 Helix-turn-helix domain ATY48_04655 PF12760 Transposase zinc-ribbon domain ATY48_04655 PF12762 ATY48_04655 ATY48_04665 PF13586 ATY48_04665 ATY48_04670 PF13340 ATY48_04670 ATY48_04675 PF01609 Transposase DDE domain ATY48_04685 PF13546 ATY48_04685 ATY48_04690 PF01609 Transposase DDE domain ATY48_04690 PF05598 ATY48_04690 ATY48_04695 PF07486 Cell Wall Hydrolase ATY48_04700 PF16387 ATY48_04700 ATY48_04705 PF13586 ATY48_04705 ATY48_04710 PF13340 ATY48_04710 ATY48_04715 PF03009 Glycerophosphoryl diester phosphodiesterase family ATY48_04735 PF01609 Transposase DDE domain ATY48_04740 PF12760 Transposase zinc-ribbon domain ATY48_04740 PF12762 ATY48_04740 ATY48_04745 PF00180 Isocitrate/isopropylmalate dehydrogenase ATY48_04750 PF12811 ATY48_04750 ATY48_04775 PF01527 Transposase ATY48_04800 PF05697 Bacterial trigger factor protein (TF) ATY48_04800 PF05698 Bacterial trigger factor protein (TF) C-terminus ATY48_04805 PF00574 Clp protease ATY48_04810 PF06689 ClpX C4-type zinc finger ATY48_04810 PF07724 AAA domain (Cdc48 subfamily) ATY48_04810 PF10431 C-terminal, D2-small domain, of ClpB protein ATY48_04815 PF00004 ATPase family associated with various cellular activities (AAA) ATY48_04815 PF02190 ATP-dependent protease La (LON) domain ATY48_04815 PF05362 Lon protease (S16) C-terminal proteolytic domain ATY48_04820 PF00216 Bacterial DNA-binding protein ATY48_04840 PF13616 PPIC-type PPIASE domain ATY48_04840 PF13623 ATY48_04840 ATY48_04845 PF01464 Transglycosylase SLT domain ATY48_04845 PF01476 LysM domain ATY48_04850 PF00753 Metallo-beta-lactamase superfamily ATY48_04850 PF16123 ATY48_04850 ATY48_04860 PF00075 RNase H ATY48_04865 PF00929 Exonuclease ATY48_04870 PF13672 Protein phosphatase 2C ATY48_04905 PF11678 ATY48_04905 ATY48_04910 PF11394 ATY48_04910 ATY48_04920 PF12760 Transposase zinc-ribbon domain ATY48_04920 PF12762 ATY48_04920 ATY48_04925 PF00589 Phage integrase family ATY48_04935 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ATY48_04940 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family ATY48_04945 PF12706 Beta-lactamase superfamily domain ATY48_04950 PF04055 Radical SAM superfamily ATY48_04950 PF06463 Molybdenum Cofactor Synthesis C ATY48_04950 PF13353 4Fe-4S single cluster domain ATY48_04960 PF01967 MoaC family ATY48_04965 PF02597 ThiS family ATY48_04970 PF02391 MoaE protein ATY48_04980 PF12169 DNA polymerase III subunits gamma and tau domain III ATY48_04980 PF12170 DNA polymerase III tau subunit V interacting with alpha ATY48_04980 PF13177 DNA polymerase III, delta subunit ATY48_04985 PF02575 YbaB/EbfC DNA-binding family ATY48_04990 PF02132 RecR protein ATY48_04990 PF13662 Toprim domain ATY48_04995 PF01230 HIT domain ATY48_05000 PF03843 ATY48_05000 ATY48_05005 PF01841 Transglutaminase-like superfamily ATY48_05005 PF11992 ATY48_05005 ATY48_05010 PF01882 ATY48_05010 ATY48_05015 PF07726 ATPase family associated with various cellular activities (AAA) ATY48_05020 PF13231 ATY48_05020 ATY48_05035 PF01327 Polypeptide deformylase ATY48_05045 PF01670 Glycosyl hydrolase family 12 ATY48_05050 PF09284 Rhamnogalacturonase B, N-terminal ATY48_05050 PF14683 Polysaccharide lyase family 4, domain III ATY48_05050 PF14686 Polysaccharide lyase family 4, domain II ATY48_05060 PF01610 ATY48_05060 ATY48_05060 PF13542 ATY48_05060 ATY48_05070 PF01609 Transposase DDE domain ATY48_05070 PF05598 ATY48_05070 ATY48_05080 PF14487 ATY48_05080 ATY48_05085 PF13546 ATY48_05085 ATY48_05090 PF00462 Glutaredoxin ATY48_05090 PF00581 Rhodanese-like domain ATY48_05095 PF01522 Polysaccharide deacetylase ATY48_05100 PF08242 Methyltransferase domain ATY48_05105 PF13472 GDSL-like Lipase/Acylhydrolase family ATY48_05110 PF00155 Aminotransferase class I and II ATY48_05115 PF03193 Protein of unknown function, DUF258 ATY48_05120 PF08014 ATY48_05120 ATY48_05125 PF01965 DJ-1/PfpI family ATY48_05130 PF00128 Alpha amylase, catalytic domain ATY48_05135 PF00593 TonB dependent receptor ATY48_05135 PF07715 TonB-dependent Receptor Plug Domain ATY48_05140 PF07690 Major Facilitator Superfamily ATY48_05145 PF00356 Bacterial regulatory proteins, lacI family ATY48_05145 PF13377 Periplasmic binding protein-like domain ATY48_05150 PF13561 Enoyl-(Acyl carrier protein) reductase ATY48_05155 PF03600 Citrate transporter ATY48_05160 PF07396 Phosphate-selective porin O and P ATY48_05165 PF00072 Response regulator receiver domain ATY48_05165 PF00486 Transcriptional regulatory protein, C terminal ATY48_05170 PF00512 His Kinase A (phospho-acceptor) domain ATY48_05170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_05170 PF08521 ATY48_05170 ATY48_05175 PF13531 Bacterial extracellular solute-binding protein ATY48_05180 PF00072 Response regulator receiver domain ATY48_05180 PF00196 Bacterial regulatory proteins, luxR family ATY48_05185 PF11512 Agrobacterium tumefaciens protein Atu4866 ATY48_05200 PF00248 Aldo/keto reductase family ATY48_05205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY48_05205 PF03466 LysR substrate binding domain ATY48_05210 PF13531 Bacterial extracellular solute-binding protein ATY48_05215 PF00083 Sugar (and other) transporter ATY48_05220 PF00072 Response regulator receiver domain ATY48_05220 PF00512 His Kinase A (phospho-acceptor) domain ATY48_05220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_05220 PF02743 Cache domain ATY48_05220 PF12860 ATY48_05220 ATY48_05225 PF07396 Phosphate-selective porin O and P ATY48_05230 PF00375 Sodium:dicarboxylate symporter family ATY48_05235 PF00390 Malic enzyme, N-terminal domain ATY48_05235 PF01515 Phosphate acetyl/butaryl transferase ATY48_05235 PF03949 Malic enzyme, NAD binding domain ATY48_05245 PF01527 Transposase ATY48_05250 PF13276 ATY48_05250 ATY48_05250 PF13683 ATY48_05250 ATY48_05275 PF02581 Thiamine monophosphate synthase/TENI ATY48_05280 PF00301 Rubredoxin ATY48_05285 PF13369 ATY48_05285 ATY48_05285 PF13371 Tetratricopeptide repeat ATY48_05290 PF02643 Uncharacterized ACR, COG1430 ATY48_05295 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ATY48_05300 PF01878 EVE domain ATY48_05305 PF01812 5-formyltetrahydrofolate cyclo-ligase family ATY48_05310 PF05164 Cell division protein ZapA ATY48_05320 PF03695 Uncharacterised protein family (UPF0149) ATY48_05325 PF00557 Metallopeptidase family M24 ATY48_05325 PF05195 Aminopeptidase P, N-terminal domain ATY48_05335 PF13586 ATY48_05335 ATY48_05340 PF13340 ATY48_05340 ATY48_05345 PF00557 Metallopeptidase family M24 ATY48_05350 PF07238 PilZ domain ATY48_05355 PF07793 ATY48_05355 ATY48_05360 PF04055 Radical SAM superfamily ATY48_05360 PF06969 HemN C-terminal domain ATY48_05365 PF01725 Ham1 family ATY48_05370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ATY48_05375 PF01138 3' exoribonuclease family, domain 1 ATY48_05375 PF03725 3' exoribonuclease family, domain 2 ATY48_05380 PF03755 ATY48_05380 ATY48_05380 PF08340 ATY48_05380 ATY48_05385 PF00625 Guanylate kinase ATY48_05390 PF01609 Transposase DDE domain ATY48_05395 PF01192 RNA polymerase Rpb6 ATY48_05400 PF02824 TGS domain ATY48_05400 PF04607 Region found in RelA / SpoT proteins ATY48_05400 PF13291 ACT domain ATY48_05400 PF13328 HD domain ATY48_05405 PF01042 Endoribonuclease L-PSP ATY48_05410 PF00270 DEAD/DEAH box helicase ATY48_05410 PF00271 Helicase conserved C-terminal domain ATY48_05410 PF17191 ATY48_05410 ATY48_05415 PF01156 Inosine-uridine preferring nucleoside hydrolase ATY48_05420 PF01197 Ribosomal protein L31 ATY48_05425 PF00285 Citrate synthase ATY48_05430 PF13546 ATY48_05430 ATY48_05440 PF00905 Penicillin binding protein transpeptidase domain ATY48_05440 PF00912 Transglycosylase ATY48_05440 PF17092 ATY48_05440 ATY48_05445 PF11104 Type IV pilus assembly protein PilM; ATY48_05450 PF05137 ATY48_05450 ATY48_05455 PF04350 Pilus assembly protein, PilO ATY48_05460 PF04351 Pilus assembly protein, PilP ATY48_05465 PF00263 ATY48_05465 ATY48_05465 PF03958 Bacterial type II/III secretion system short domain ATY48_05465 PF07660 Secretin and TonB N terminus short domain ATY48_05470 PF01609 Transposase DDE domain ATY48_05475 PF13340 ATY48_05475 ATY48_05480 PF01610 ATY48_05480 ATY48_05480 PF13542 ATY48_05480 ATY48_05490 PF07726 ATPase family associated with various cellular activities (AAA) ATY48_05495 PF01882 ATY48_05495 ATY48_05500 PF14316 ATY48_05500 ATY48_05505 PF00092 von Willebrand factor type A domain ATY48_05510 PF00515 Tetratricopeptide repeat ATY48_05510 PF13519 von Willebrand factor type A domain ATY48_05515 PF13584 ATY48_05515 ATY48_05520 PF12395 ATY48_05520 ATY48_05525 PF00375 Sodium:dicarboxylate symporter family ATY48_05530 PF00456 Transketolase, thiamine diphosphate binding domain ATY48_05530 PF02779 Transketolase, pyrimidine binding domain ATY48_05530 PF02780 Transketolase, C-terminal domain ATY48_05540 PF01551 Peptidase family M23 ATY48_05545 PF01471 Putative peptidoglycan binding domain ATY48_05545 PF03734 L,D-transpeptidase catalytic domain ATY48_05550 PF00593 TonB dependent receptor ATY48_05550 PF07715 TonB-dependent Receptor Plug Domain ATY48_05555 PF16670 ATY48_05555 ATY48_05560 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ATY48_05565 PF12261 ATY48_05565 ATY48_05570 PF00501 AMP-binding enzyme ATY48_05575 PF14518 Iron-containing redox enzyme ATY48_05580 PF00106 short chain dehydrogenase ATY48_05590 PF00072 Response regulator receiver domain ATY48_05590 PF00486 Transcriptional regulatory protein, C terminal ATY48_05595 PF00512 His Kinase A (phospho-acceptor) domain ATY48_05595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_05595 PF08521 ATY48_05595 ATY48_05600 PF03965 Penicillinase repressor ATY48_05605 PF03544 Gram-negative bacterial TonB protein C-terminal ATY48_05605 PF05569 BlaR1 peptidase M56 ATY48_05615 PF00005 ABC transporter ATY48_05620 PF00528 Binding-protein-dependent transport system inner membrane component ATY48_05625 PF13531 Bacterial extracellular solute-binding protein ATY48_05630 PF00753 Metallo-beta-lactamase superfamily ATY48_05635 PF02265 S1/P1 Nuclease ATY48_05665 PF13340 ATY48_05665 ATY48_05670 PF13586 ATY48_05670 ATY48_05675 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ATY48_05675 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ATY48_05680 PF13340 ATY48_05680 ATY48_05685 PF13586 ATY48_05685 ATY48_05690 PF12760 Transposase zinc-ribbon domain ATY48_05690 PF12762 ATY48_05690 ATY48_05695 PF00512 His Kinase A (phospho-acceptor) domain ATY48_05695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_05700 PF00072 Response regulator receiver domain ATY48_05700 PF00486 Transcriptional regulatory protein, C terminal ATY48_05710 PF08443 RimK-like ATP-grasp domain ATY48_05720 PF01569 PAP2 superfamily ATY48_05720 PF09335 ATY48_05720 ATY48_05720 PF14067 ATY48_05720 ATY48_05730 PF01609 Transposase DDE domain ATY48_05740 PF12889 Protein of unknown function (DUF3829) ATY48_05745 PF12889 Protein of unknown function (DUF3829) ATY48_05750 PF00520 Ion transport protein ATY48_05755 PF00202 Aminotransferase class-III ATY48_05760 PF13419 Haloacid dehalogenase-like hydrolase ATY48_05770 PF01593 Flavin containing amine oxidoreductase ATY48_05775 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ATY48_05780 PF01042 Endoribonuclease L-PSP ATY48_05790 PF00155 Aminotransferase class I and II ATY48_05800 PF00127 Copper binding proteins, plastocyanin/azurin family ATY48_05810 PF00202 Aminotransferase class-III ATY48_05815 PF07715 TonB-dependent Receptor Plug Domain ATY48_05815 PF13620 Carboxypeptidase regulatory-like domain ATY48_05820 PF00665 Integrase core domain ATY48_05820 PF13936 Helix-turn-helix domain ATY48_05835 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY48_05850 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY48_05865 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY48_05880 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY48_05900 PF01208 Uroporphyrinogen decarboxylase (URO-D) ATY48_05910 PF01761 3-dehydroquinate synthase ATY48_05915 PF01202 Shikimate kinase ATY48_05920 PF01243 Pyridoxamine 5'-phosphate oxidase ATY48_05920 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ATY48_05925 PF09938 ATY48_05925 ATY48_05930 PF04012 ATY48_05930 ATY48_05935 PF07885 Ion channel ATY48_05940 PF10679 ATY48_05940 ATY48_05945 PF03994 ATY48_05945 ATY48_05950 PF06693 ATY48_05950 ATY48_05955 PF03738 Glutathionylspermidine synthase preATP-grasp ATY48_05980 PF00376 MerR family regulatory protein ATY48_05980 PF09278 MerR, DNA binding ATY48_05985 PF01433 Peptidase family M1 ATY48_05995 PF00593 TonB dependent receptor ATY48_05995 PF07715 TonB-dependent Receptor Plug Domain ATY48_06000 PF07277 ATY48_06000 ATY48_06005 PF13621 Cupin-like domain ATY48_06010 PF04820 Tryptophan halogenase ATY48_06015 PF12706 Beta-lactamase superfamily domain ATY48_06030 PF13365 Trypsin-like peptidase domain ATY48_06035 PF13520 Amino acid permease ATY48_06040 PF00196 Bacterial regulatory proteins, luxR family ATY48_06040 PF03472 Autoinducer binding domain ATY48_06045 PF00561 alpha/beta hydrolase fold ATY48_06050 PF00324 Amino acid permease ATY48_06055 PF01610 ATY48_06055 ATY48_06055 PF13542 ATY48_06055 ATY48_06060 PF01654 ATY48_06060 ATY48_06065 PF02322 ATY48_06065 ATY48_06070 PF00326 Prolyl oligopeptidase family ATY48_06075 PF00571 CBS domain ATY48_06075 PF01769 Divalent cation transporter ATY48_06075 PF03448 MgtE intracellular N domain ATY48_06080 PF00391 PEP-utilising enzyme, mobile domain ATY48_06080 PF02896 PEP-utilising enzyme, TIM barrel domain ATY48_06080 PF05524 PEP-utilising enzyme, N-terminal ATY48_06085 PF00381 PTS HPr component phosphorylation site ATY48_06090 PF03610 PTS system fructose IIA component ATY48_06095 PF03668 ATY48_06095 ATY48_06100 PF02603 HPr Serine kinase N terminus ATY48_06100 PF07475 HPr Serine kinase C-terminal domain ATY48_06105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ATY48_06110 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ATY48_06115 PF00309 ATY48_06115 ATY48_06115 PF04552 Sigma-54, DNA binding domain ATY48_06115 PF04963 Sigma-54 factor, core binding domain ATY48_06120 PF00005 ABC transporter ATY48_06120 PF12399 Branched-chain amino acid ATP-binding cassette transporter ATY48_06125 PF03968 OstA-like protein ATY48_06130 PF06835 Lipopolysaccharide-assembly, LptC-related ATY48_06135 PF08282 haloacid dehalogenase-like hydrolase ATY48_06140 PF00571 CBS domain ATY48_06140 PF01380 SIS domain ATY48_06145 PF01722 BolA-like protein ATY48_06150 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ATY48_06160 PF11306 Protein of unknown function (DUF3108) ATY48_06165 PF11306 Protein of unknown function (DUF3108) ATY48_06170 PF00551 Formyl transferase ATY48_06175 PF09997 ATY48_06175 ATY48_06185 PF00586 AIR synthase related protein, N-terminal domain ATY48_06185 PF02769 AIR synthase related protein, C-terminal domain ATY48_06190 PF09839 ATY48_06190 ATY48_06195 PF01594 ATY48_06195 ATY48_06200 PF00308 Bacterial dnaA protein ATY48_06205 PF00483 Nucleotidyl transferase ATY48_06210 PF01636 Phosphotransferase enzyme family ATY48_06215 PF04226 ATY48_06215 ATY48_06225 PF13358 DDE superfamily endonuclease ATY48_06225 PF13592 ATY48_06225 ATY48_06230 PF01546 Peptidase family M20/M25/M40 ATY48_06230 PF07687 Peptidase dimerisation domain ATY48_06235 PF12836 Helix-hairpin-helix motif ATY48_06255 PF05962 HutD ATY48_06260 PF05598 ATY48_06260 ATY48_06280 PF06964 Alpha-L-arabinofuranosidase C-terminus ATY48_06285 PF01263 Aldose 1-epimerase ATY48_06290 PF01578 ATY48_06290 ATY48_06300 PF00448 SRP54-type protein, GTPase domain ATY48_06300 PF02881 SRP54-type protein, helical bundle domain ATY48_06300 PF02978 Signal peptide binding domain ATY48_06310 PF03060 Nitronate monooxygenase ATY48_06315 PF01063 Aminotransferase class IV ATY48_06320 PF00886 Ribosomal protein S16 ATY48_06325 PF01782 RimM N-terminal domain ATY48_06325 PF05239 PRC-barrel domain ATY48_06330 PF01746 tRNA (Guanine-1)-methyltransferase ATY48_06335 PF01245 Ribosomal protein L19 ATY48_06340 PF01554 MatE ATY48_06345 PF01479 S4 domain ATY48_06350 PF01609 Transposase DDE domain ATY48_06355 PF13546 ATY48_06355 ATY48_06365 PF01541 GIY-YIG catalytic domain ATY48_06370 PF00004 ATPase family associated with various cellular activities (AAA) ATY48_06370 PF02861 Clp amino terminal domain ATY48_06370 PF07724 AAA domain (Cdc48 subfamily) ATY48_06370 PF10431 C-terminal, D2-small domain, of ClpB protein ATY48_06385 PF01527 Transposase ATY48_06400 PF00593 TonB dependent receptor ATY48_06400 PF07715 TonB-dependent Receptor Plug Domain ATY48_06405 PF13546 ATY48_06405 ATY48_06420 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ATY48_06420 PF12557 Cob(I)alamin adenosyltransferase N terminal ATY48_06430 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ATY48_06435 PF02277 Phosphoribosyltransferase ATY48_06440 PF00300 Histidine phosphatase superfamily (branch 1) ATY48_06445 PF02654 ATY48_06445 ATY48_06450 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ATY48_06450 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ATY48_06455 PF04183 IucA / IucC family ATY48_06455 PF06276 Ferric iron reductase FhuF-like transporter ATY48_06465 PF04183 IucA / IucC family ATY48_06465 PF06276 Ferric iron reductase FhuF-like transporter ATY48_06475 PF00593 TonB dependent receptor ATY48_06475 PF07715 TonB-dependent Receptor Plug Domain ATY48_06480 PF03328 HpcH/HpaI aldolase/citrate lyase family ATY48_06485 PF13276 ATY48_06485 ATY48_06485 PF13683 ATY48_06485 ATY48_06490 PF00999 Sodium/hydrogen exchanger family ATY48_06490 PF02254 TrkA-N domain ATY48_06500 PF00593 TonB dependent receptor ATY48_06500 PF07715 TonB-dependent Receptor Plug Domain ATY48_06505 PF00593 TonB dependent receptor ATY48_06505 PF07715 TonB-dependent Receptor Plug Domain ATY48_06510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ATY48_06515 PF00593 TonB dependent receptor ATY48_06515 PF07715 TonB-dependent Receptor Plug Domain ATY48_06520 PF00005 ABC transporter ATY48_06520 PF12848 ABC transporter ATY48_06520 PF16326 ATY48_06520 ATY48_06530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY48_06530 PF03466 LysR substrate binding domain ATY48_06540 PF07859 alpha/beta hydrolase fold ATY48_06550 PF05598 ATY48_06550 ATY48_06560 PF00486 Transcriptional regulatory protein, C terminal ATY48_06565 PF12833 Helix-turn-helix domain ATY48_06570 PF00183 Hsp90 protein ATY48_06570 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_06580 PF01609 Transposase DDE domain ATY48_06585 PF00665 Integrase core domain ATY48_06590 PF01527 Transposase ATY48_06595 PF05598 ATY48_06595 ATY48_06600 PF00872 ATY48_06600 ATY48_06610 PF00487 ATY48_06610 ATY48_06615 PF01053 Cys/Met metabolism PLP-dependent enzyme ATY48_06620 PF13683 ATY48_06620 ATY48_06625 PF12760 Transposase zinc-ribbon domain ATY48_06625 PF12762 ATY48_06625 ATY48_06630 PF00665 Integrase core domain ATY48_06630 PF13276 ATY48_06630 ATY48_06635 PF01527 Transposase ATY48_06640 PF01609 Transposase DDE domain ATY48_06645 PF00355 Rieske [2Fe-2S] domain ATY48_06650 PF13673 Acetyltransferase (GNAT) domain ATY48_06655 PF00266 Aminotransferase class-V ATY48_06660 PF01458 Uncharacterized protein family (UPF0051) ATY48_06665 PF00005 ABC transporter ATY48_06670 PF01458 Uncharacterized protein family (UPF0051) ATY48_06675 PF02082 Transcriptional regulator ATY48_06680 PF00856 SET domain ATY48_06695 PF07273 Protein of unknown function (DUF1439) ATY48_06705 PF12977 Domain of Unknown Function with PDB structure (DUF3861) ATY48_06710 PF01551 Peptidase family M23 ATY48_06715 PF00216 Bacterial DNA-binding protein ATY48_06720 PF13546 ATY48_06720 ATY48_06725 PF03807 NADP oxidoreductase coenzyme F420-dependent ATY48_06725 PF14748 Pyrroline-5-carboxylate reductase dimerisation ATY48_06730 PF01168 Alanine racemase, N-terminal domain ATY48_06735 PF13340 ATY48_06735 ATY48_06740 PF13586 ATY48_06740 ATY48_06745 PF00437 Type II/IV secretion system protein ATY48_06750 PF00437 Type II/IV secretion system protein ATY48_06755 PF02588 ATY48_06755 ATY48_06765 PF03352 Methyladenine glycosylase ATY48_06780 PF02622 Uncharacterized ACR, COG1678 ATY48_06785 PF03652 Uncharacterised protein family (UPF0081) ATY48_06790 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ATY48_06790 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ATY48_06795 PF02566 OsmC-like protein ATY48_06800 PF05433 ATY48_06800 ATY48_06805 PF02567 Phenazine biosynthesis-like protein ATY48_06810 PF02567 Phenazine biosynthesis-like protein ATY48_06815 PF02567 Phenazine biosynthesis-like protein ATY48_06820 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ATY48_06820 PF00696 Amino acid kinase family ATY48_06820 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ATY48_06835 PF08245 Mur ligase middle domain ATY48_06845 PF01738 Dienelactone hydrolase family ATY48_06850 PF00348 Polyprenyl synthetase ATY48_06855 PF00436 Single-strand binding protein family ATY48_06860 PF00990 GGDEF domain ATY48_06860 PF02743 Cache domain ATY48_06865 PF00107 Zinc-binding dehydrogenase ATY48_06865 PF08240 Alcohol dehydrogenase GroES-like domain ATY48_06870 PF13602 Zinc-binding dehydrogenase ATY48_06880 PF12760 Transposase zinc-ribbon domain ATY48_06880 PF12762 ATY48_06880 ATY48_06890 PF13419 Haloacid dehalogenase-like hydrolase ATY48_06895 PF04328 ATY48_06895 ATY48_06900 PF02554 ATY48_06900 ATY48_06900 PF13722 ATY48_06900 ATY48_06905 PF02678 Pirin ATY48_06905 PF05726 Pirin C-terminal cupin domain ATY48_06910 PF02566 OsmC-like protein ATY48_06915 PF05954 Phage late control gene D protein (GPD) ATY48_06915 PF10106 ATY48_06915 ATY48_06915 PF13296 ATY48_06915 ATY48_06920 PF13503 ATY48_06920 ATY48_06930 PF11745 ATY48_06930 ATY48_06935 PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) ATY48_06940 PF10106 ATY48_06940 ATY48_06940 PF13296 ATY48_06940 ATY48_06945 PF13503 ATY48_06945 ATY48_06950 PF01609 Transposase DDE domain ATY48_06950 PF05598 ATY48_06950 ATY48_06955 PF11745 ATY48_06955 ATY48_06960 PF11745 ATY48_06960 ATY48_06965 PF11745 ATY48_06965 ATY48_06970 PF11745 ATY48_06970 ATY48_06975 PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) ATY48_06985 PF02678 Pirin ATY48_06985 PF05726 Pirin C-terminal cupin domain ATY48_06995 PF04493 Endonuclease V ATY48_07000 PF00300 Histidine phosphatase superfamily (branch 1) ATY48_07010 PF01431 Peptidase family M13 ATY48_07010 PF05649 Peptidase family M13 ATY48_07020 PF00072 Response regulator receiver domain ATY48_07020 PF01339 CheB methylesterase ATY48_07025 PF01739 CheR methyltransferase, SAM binding domain ATY48_07025 PF03705 CheR methyltransferase, all-alpha domain ATY48_07030 PF00072 Response regulator receiver domain ATY48_07030 PF00563 EAL domain ATY48_07035 PF01584 CheW-like domain ATY48_07040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY48_07045 PF01584 CheW-like domain ATY48_07045 PF01627 Hpt domain ATY48_07045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_07045 PF02895 Signal transducing histidine kinase, homodimeric domain ATY48_07050 PF13466 STAS domain ATY48_07055 PF00270 DEAD/DEAH box helicase ATY48_07055 PF00271 Helicase conserved C-terminal domain ATY48_07055 PF02559 CarD-like/TRCF domain ATY48_07055 PF03461 TRCF domain ATY48_07060 PF13302 Acetyltransferase (GNAT) domain ATY48_07065 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ ATY48_07070 PF01609 Transposase DDE domain ATY48_07075 PF00512 His Kinase A (phospho-acceptor) domain ATY48_07075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_07080 PF13551 Winged helix-turn helix ATY48_07080 PF13592 ATY48_07080 ATY48_07085 PF13358 DDE superfamily endonuclease ATY48_07090 PF00112 Papain family cysteine protease ATY48_07095 PF06123 ATY48_07095 ATY48_07100 PF01609 Transposase DDE domain ATY48_07100 PF05598 ATY48_07100 ATY48_07105 PF13358 DDE superfamily endonuclease ATY48_07105 PF13551 Winged helix-turn helix ATY48_07105 PF13592 ATY48_07105 ATY48_07110 PF00112 Papain family cysteine protease ATY48_07115 PF06123 ATY48_07115 ATY48_07120 PF01609 Transposase DDE domain ATY48_07120 PF05598 ATY48_07120 ATY48_07125 PF00112 Papain family cysteine protease ATY48_07140 PF13936 Helix-turn-helix domain ATY48_07145 PF00795 Carbon-nitrogen hydrolase ATY48_07150 PF12275 ATY48_07150 ATY48_07155 PF00749 tRNA synthetases class I (E and Q), catalytic domain ATY48_07160 PF01475 Ferric uptake regulator family ATY48_07165 PF07883 Cupin domain ATY48_07180 PF04306 ATY48_07180 ATY48_07185 PF00313 'Cold-shock' DNA-binding domain ATY48_07190 PF05433 ATY48_07190 ATY48_07195 PF01322 Cytochrome C' ATY48_07200 PF00899 ThiF family ATY48_07205 PF01026 TatD related DNase ATY48_07215 PF05433 ATY48_07215 ATY48_07220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATY48_07220 PF02770 Acyl-CoA dehydrogenase, middle domain ATY48_07220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATY48_07240 PF00043 Glutathione S-transferase, C-terminal domain ATY48_07240 PF02798 Glutathione S-transferase, N-terminal domain ATY48_07245 PF00733 Asparagine synthase ATY48_07245 PF13537 Glutamine amidotransferase domain ATY48_07250 PF03358 NADPH-dependent FMN reductase ATY48_07255 PF00772 DnaB-like helicase N terminal domain ATY48_07255 PF03796 DnaB-like helicase C terminal domain ATY48_07260 PF00875 DNA photolyase ATY48_07260 PF03441 FAD binding domain of DNA photolyase ATY48_07270 PF00691 OmpA family ATY48_07270 PF13488 ATY48_07270 ATY48_07275 PF13561 Enoyl-(Acyl carrier protein) reductase ATY48_07285 PF00593 TonB dependent receptor ATY48_07285 PF07715 TonB-dependent Receptor Plug Domain ATY48_07290 PF00593 TonB dependent receptor ATY48_07290 PF07715 TonB-dependent Receptor Plug Domain ATY48_07300 PF03203 ATY48_07300 ATY48_07305 PF17067 ATY48_07305 ATY48_07310 PF00107 Zinc-binding dehydrogenase ATY48_07310 PF08240 Alcohol dehydrogenase GroES-like domain ATY48_07315 PF00654 Voltage gated chloride channel ATY48_07320 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase ATY48_07325 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ATY48_07325 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ATY48_07330 PF00730 HhH-GPD superfamily base excision DNA repair protein ATY48_07330 PF02805 Metal binding domain of Ada ATY48_07330 PF06029 AlkA N-terminal domain ATY48_07330 PF12833 Helix-turn-helix domain ATY48_07350 PF13211 ATY48_07350 ATY48_07355 PF01124 MAPEG family ATY48_07365 PF13275 S4 domain ATY48_07375 PF00270 DEAD/DEAH box helicase ATY48_07375 PF00271 Helicase conserved C-terminal domain ATY48_07375 PF03880 DbpA RNA binding domain ATY48_07380 PF00563 EAL domain ATY48_07380 PF00990 GGDEF domain ATY48_07385 PF00849 RNA pseudouridylate synthase ATY48_07385 PF01479 S4 domain ATY48_07390 PF00892 EamA-like transporter family ATY48_07400 PF03737 Demethylmenaquinone methyltransferase ATY48_07405 PF00144 Beta-lactamase ATY48_07405 PF11954 ATY48_07405 ATY48_07410 PF00999 Sodium/hydrogen exchanger family ATY48_07415 PF00512 His Kinase A (phospho-acceptor) domain ATY48_07415 PF00672 HAMP domain ATY48_07415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_07420 PF00072 Response regulator receiver domain ATY48_07420 PF00486 Transcriptional regulatory protein, C terminal ATY48_07425 PF02321 Outer membrane efflux protein ATY48_07430 PF06629 ATY48_07430 ATY48_07435 PF13437 HlyD family secretion protein ATY48_07435 PF13533 Biotin-lipoyl like ATY48_07440 PF00873 AcrB/AcrD/AcrF family ATY48_07445 PF07929 Plasmid pRiA4b ORF-3-like protein ATY48_07450 PF00005 ABC transporter ATY48_07450 PF00664 ABC transporter transmembrane region ATY48_07455 PF13586 ATY48_07455 ATY48_07460 PF13340 ATY48_07460 ATY48_07465 PF13546 ATY48_07465 ATY48_07470 PF01609 Transposase DDE domain ATY48_07470 PF05598 ATY48_07470 ATY48_07475 PF05593 ATY48_07475 ATY48_07475 PF15523 ATY48_07475 ATY48_07480 PF01609 Transposase DDE domain ATY48_07480 PF05598 ATY48_07480 ATY48_07490 PF01609 Transposase DDE domain ATY48_07490 PF05598 ATY48_07490 ATY48_07500 PF13936 Helix-turn-helix domain ATY48_07505 PF13546 ATY48_07505 ATY48_07510 PF01121 Dephospho-CoA kinase ATY48_07515 PF01478 Type IV leader peptidase family ATY48_07515 PF06750 ATY48_07515 ATY48_07520 PF00482 Type II secretion system (T2SS), protein F ATY48_07525 PF00114 Pilin (bacterial filament) ATY48_07525 PF07963 Prokaryotic N-terminal methylation motif ATY48_07530 PF00884 Sulfatase ATY48_07540 PF01564 Spermine/spermidine synthase ATY48_07545 PF00437 Type II/IV secretion system protein ATY48_07545 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ATY48_07550 PF02661 Fic/DOC family ATY48_07555 PF00072 Response regulator receiver domain ATY48_07555 PF00158 Sigma-54 interaction domain ATY48_07555 PF02954 Bacterial regulatory protein, Fis family ATY48_07560 PF00512 His Kinase A (phospho-acceptor) domain ATY48_07560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_07565 PF00549 CoA-ligase ATY48_07565 PF08442 ATP-grasp domain ATY48_07570 PF00549 CoA-ligase ATY48_07570 PF02629 CoA binding domain ATY48_07580 PF00795 Carbon-nitrogen hydrolase ATY48_07580 PF02540 NAD synthase ATY48_07585 PF13525 Outer membrane lipoprotein ATY48_07590 PF00849 RNA pseudouridylate synthase ATY48_07595 PF02578 Multi-copper polyphenol oxidoreductase laccase ATY48_07600 PF13761 ATY48_07600 ATY48_07605 PF04134 ATY48_07605 ATY48_07610 PF00982 Glycosyltransferase family 20 ATY48_07615 PF00723 Glycosyl hydrolases family 15 ATY48_07620 PF02358 Trehalose-phosphatase ATY48_07630 PF00593 TonB dependent receptor ATY48_07630 PF07715 TonB-dependent Receptor Plug Domain ATY48_07635 PF12098 ATY48_07635 ATY48_07640 PF14486 Domain of unknown function (DUF4432) ATY48_07655 PF03372 Endonuclease/Exonuclease/phosphatase family ATY48_07660 PF04376 ATY48_07660 ATY48_07660 PF04377 ATY48_07660 ATY48_07665 PF13202 EF hand ATY48_07670 PF01609 Transposase DDE domain ATY48_07680 PF04542 Sigma-70 region 2 ATY48_07690 PF13622 Thioesterase-like superfamily ATY48_07695 PF00378 Enoyl-CoA hydratase/isomerase family ATY48_07700 PF04314 Protein of unknown function (DUF461) ATY48_07705 PF13279 Thioesterase-like superfamily ATY48_07715 PF00829 Ribosomal prokaryotic L21 protein ATY48_07720 PF01016 Ribosomal L27 protein ATY48_07725 PF01018 GTP1/OBG ATY48_07725 PF01926 50S ribosome-binding GTPase ATY48_07730 PF01649 Ribosomal protein S20 ATY48_07735 PF03023 ATY48_07735 ATY48_07740 PF01687 Riboflavin kinase ATY48_07740 PF06574 FAD synthetase ATY48_07745 PF00133 tRNA synthetases class I (I, L, M and V) ATY48_07745 PF06827 Zinc finger found in FPG and IleRS ATY48_07745 PF08264 Anticodon-binding domain of tRNA ATY48_07750 PF01252 ATY48_07750 ATY48_07755 PF02401 LytB protein ATY48_07765 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ATY48_07765 PF06481 COX Aromatic Rich Motif ATY48_07770 PF00115 Cytochrome C and Quinol oxidase polypeptide I ATY48_07775 PF00510 Cytochrome c oxidase subunit III ATY48_07780 PF03626 ATY48_07780 ATY48_07785 PF05299 M61 glycyl aminopeptidase ATY48_07785 PF07720 Tetratricopeptide repeat ATY48_07790 PF05954 Phage late control gene D protein (GPD) ATY48_07800 PF05593 ATY48_07800 ATY48_07800 PF14440 ATY48_07800 ATY48_07805 PF14435 ATY48_07805 ATY48_07810 PF05593 ATY48_07810 ATY48_07815 PF01527 Transposase ATY48_07820 PF13276 ATY48_07820 ATY48_07820 PF13683 ATY48_07820 ATY48_07835 PF00488 MutS domain V ATY48_07835 PF01624 MutS domain I ATY48_07835 PF05188 MutS domain II ATY48_07835 PF05190 MutS family domain IV ATY48_07835 PF05192 MutS domain III ATY48_07845 PF13276 ATY48_07845 ATY48_07845 PF13683 ATY48_07845 ATY48_07850 PF01527 Transposase ATY48_07860 PF13481 AAA domain ATY48_07860 PF13541 Subunit ChlI of Mg-chelatase ATY48_07870 PF01527 Transposase ATY48_07875 PF13231 ATY48_07875 ATY48_07880 PF04185 Phosphoesterase family ATY48_07880 PF05506 ATY48_07880 ATY48_07885 PF04185 Phosphoesterase family ATY48_07890 PF04185 Phosphoesterase family ATY48_07895 PF07690 Major Facilitator Superfamily ATY48_07900 PF09723 ATY48_07900 ATY48_07905 PF11218 ATY48_07905 ATY48_07910 PF00152 tRNA synthetases class II (D, K and N) ATY48_07910 PF01336 OB-fold nucleic acid binding domain ATY48_07910 PF02938 GAD domain ATY48_07915 PF00583 Acetyltransferase (GNAT) family ATY48_07925 PF01709 Transcriptional regulator ATY48_07930 PF02075 Crossover junction endodeoxyribonuclease RuvC ATY48_07935 PF01330 RuvA N terminal domain ATY48_07935 PF07499 RuvA, C-terminal domain ATY48_07935 PF14520 Helix-hairpin-helix domain ATY48_07940 PF02705 ATY48_07940 ATY48_07945 PF05491 Holliday junction DNA helicase ruvB C-terminus ATY48_07945 PF05496 Holliday junction DNA helicase ruvB N-terminus ATY48_07950 PF03061 Thioesterase superfamily ATY48_07955 PF01618 ATY48_07955 ATY48_07960 PF02472 Biopolymer transport protein ExbD/TolR ATY48_07965 PF13103 TonB C terminal ATY48_07970 PF04052 TolB amino-terminal domain ATY48_07970 PF07676 WD40-like Beta Propeller Repeat ATY48_07975 PF00691 OmpA family ATY48_07980 PF13525 Outer membrane lipoprotein ATY48_07980 PF16331 ATY48_07980 ATY48_07985 PF04055 Radical SAM superfamily ATY48_07985 PF13394 4Fe-4S single cluster domain ATY48_07990 PF01479 S4 domain ATY48_08025 PF01610 ATY48_08025 ATY48_08025 PF13542 ATY48_08025 ATY48_08030 PF13586 ATY48_08030 ATY48_08035 PF13340 ATY48_08035 ATY48_08040 PF01609 Transposase DDE domain ATY48_08040 PF05598 ATY48_08040 ATY48_08045 PF06508 Queuosine biosynthesis protein QueC ATY48_08055 PF00072 Response regulator receiver domain ATY48_08065 PF00270 DEAD/DEAH box helicase ATY48_08065 PF00271 Helicase conserved C-terminal domain ATY48_08065 PF00570 HRDC domain ATY48_08065 PF09382 RQC domain ATY48_08065 PF16124 ATY48_08065 ATY48_08070 PF00210 Ferritin-like domain ATY48_08075 PF00270 DEAD/DEAH box helicase ATY48_08075 PF00271 Helicase conserved C-terminal domain ATY48_08075 PF04408 Helicase associated domain (HA2) ATY48_08075 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ATY48_08075 PF11898 ATY48_08075 ATY48_08080 PF00593 TonB dependent receptor ATY48_08080 PF07715 TonB-dependent Receptor Plug Domain ATY48_08085 PF02685 Glucokinase ATY48_08090 PF02685 Glucokinase ATY48_08095 PF02685 Glucokinase ATY48_08100 PF10142 PhoPQ-activated pathogenicity-related protein ATY48_08105 PF13340 ATY48_08105 ATY48_08110 PF01609 Transposase DDE domain ATY48_08120 PF04055 Radical SAM superfamily ATY48_08120 PF13186 Iron-sulfur cluster-binding domain ATY48_08120 PF13353 4Fe-4S single cluster domain ATY48_08125 PF05402 Coenzyme PQQ synthesis protein D (PqqD) ATY48_08130 PF03070 TENA/THI-4/PQQC family ATY48_08135 PF12706 Beta-lactamase superfamily domain ATY48_08140 PF02824 TGS domain ATY48_08140 PF04607 Region found in RelA / SpoT proteins ATY48_08140 PF13291 ACT domain ATY48_08140 PF13328 HD domain ATY48_08150 PF00535 Glycosyl transferase family 2 ATY48_08150 PF13692 Glycosyl transferases group 1 ATY48_08155 PF00905 Penicillin binding protein transpeptidase domain ATY48_08155 PF00912 Transglycosylase ATY48_08155 PF14814 Bifunctional transglycosylase second domain ATY48_08165 PF13307 Helicase C-terminal domain ATY48_08170 PF00814 Glycoprotease family ATY48_08175 PF03747 ADP-ribosylglycohydrolase ATY48_08180 PF03544 Gram-negative bacterial TonB protein C-terminal ATY48_08185 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ATY48_08185 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ATY48_08190 PF00072 Response regulator receiver domain ATY48_08195 PF00072 Response regulator receiver domain ATY48_08200 PF01584 CheW-like domain ATY48_08205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY48_08210 PF00072 Response regulator receiver domain ATY48_08210 PF01584 CheW-like domain ATY48_08210 PF01627 Hpt domain ATY48_08210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_08210 PF02895 Signal transducing histidine kinase, homodimeric domain ATY48_08215 PF01339 CheB methylesterase ATY48_08220 PF01584 CheW-like domain ATY48_08225 PF13302 Acetyltransferase (GNAT) domain ATY48_08230 PF13358 DDE superfamily endonuclease ATY48_08230 PF13518 Helix-turn-helix domain ATY48_08235 PF12034 ATY48_08235 ATY48_08240 PF00092 von Willebrand factor type A domain ATY48_08240 PF12450 ATY48_08240 ATY48_08245 PF12760 Transposase zinc-ribbon domain ATY48_08250 PF12762 ATY48_08250 ATY48_08255 PF01112 Asparaginase ATY48_08260 PF03932 CutC family ATY48_08265 PF00560 Leucine Rich Repeat ATY48_08270 PF13088 BNR repeat-like domain ATY48_08285 PF01610 ATY48_08285 ATY48_08285 PF13542 ATY48_08285 ATY48_08305 PF01301 Glycosyl hydrolases family 35 ATY48_08310 PF07971 Glycosyl hydrolase family 92 ATY48_08315 PF06824 Protein of unknown function (DUF1237) ATY48_08320 PF13533 Biotin-lipoyl like ATY48_08335 PF13437 HlyD family secretion protein ATY48_08360 PF01610 ATY48_08360 ATY48_08360 PF13542 ATY48_08360 ATY48_08365 PF00005 ABC transporter ATY48_08365 PF00664 ABC transporter transmembrane region ATY48_08365 PF03412 Peptidase C39 family ATY48_08370 PF00933 Glycosyl hydrolase family 3 N terminal domain ATY48_08370 PF01915 Glycosyl hydrolase family 3 C-terminal domain ATY48_08370 PF07691 PA14 domain ATY48_08370 PF14310 Fibronectin type III-like domain ATY48_08375 PF00703 Glycosyl hydrolases family 2 ATY48_08380 PF00728 Glycosyl hydrolase family 20, catalytic domain ATY48_08380 PF02838 Glycosyl hydrolase family 20, domain 2 ATY48_08380 PF13290 ATY48_08380 ATY48_08385 PF00704 Glycosyl hydrolases family 18 ATY48_08390 PF01120 Alpha-L-fucosidase ATY48_08390 PF16757 ATY48_08390 ATY48_08395 PF00593 TonB dependent receptor ATY48_08395 PF07715 TonB-dependent Receptor Plug Domain ATY48_08400 PF02685 Glucokinase ATY48_08405 PF04452 RNA methyltransferase ATY48_08410 PF00202 Aminotransferase class-III ATY48_08415 PF00293 NUDIX domain ATY48_08420 PF00459 Inositol monophosphatase family ATY48_08425 PF03819 MazG nucleotide pyrophosphohydrolase domain ATY48_08435 PF01145 SPFH domain / Band 7 family ATY48_08435 PF16200 ATY48_08435 ATY48_08445 PF01571 Aminomethyltransferase folate-binding domain ATY48_08445 PF08669 Glycine cleavage T-protein C-terminal barrel domain ATY48_08450 PF01597 Glycine cleavage H-protein ATY48_08460 PF00144 Beta-lactamase ATY48_08470 PF06993 ATY48_08470 ATY48_08475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATY48_08475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATY48_08475 PF09317 ATY48_08475 ATY48_08480 PF12146 Putative lysophospholipase ATY48_08485 PF00440 Bacterial regulatory proteins, tetR family ATY48_08490 PF00593 TonB dependent receptor ATY48_08490 PF07715 TonB-dependent Receptor Plug Domain ATY48_08500 PF01430 Hsp33 protein ATY48_08505 PF00912 Transglycosylase ATY48_08510 PF00535 Glycosyl transferase family 2 ATY48_08515 PF00571 CBS domain ATY48_08520 PF05170 ATY48_08520 ATY48_08525 PF03006 ATY48_08525 ATY48_08530 PF00009 Elongation factor Tu GTP binding domain ATY48_08530 PF16658 ATY48_08530 ATY48_08535 PF01551 Peptidase family M23 ATY48_08540 PF00561 alpha/beta hydrolase fold ATY48_08545 PF01053 Cys/Met metabolism PLP-dependent enzyme ATY48_08555 PF03313 ATY48_08555 ATY48_08555 PF03315 Serine dehydratase beta chain ATY48_08560 PF05768 Glutaredoxin-like domain (DUF836) ATY48_08565 PF04264 YceI-like domain ATY48_08570 PF01292 Prokaryotic cytochrome b561 ATY48_08575 PF04264 YceI-like domain ATY48_08580 PF00072 Response regulator receiver domain ATY48_08580 PF00512 His Kinase A (phospho-acceptor) domain ATY48_08580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_08580 PF07494 Two component regulator propeller ATY48_08580 PF07495 Y_Y_Y domain ATY48_08585 PF00072 Response regulator receiver domain ATY48_08585 PF00512 His Kinase A (phospho-acceptor) domain ATY48_08585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_08585 PF07494 Two component regulator propeller ATY48_08585 PF07495 Y_Y_Y domain ATY48_08590 PF00072 Response regulator receiver domain ATY48_08590 PF00512 His Kinase A (phospho-acceptor) domain ATY48_08590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_08590 PF07494 Two component regulator propeller ATY48_08590 PF07495 Y_Y_Y domain ATY48_08610 PF00754 F5/8 type C domain ATY48_08610 PF01120 Alpha-L-fucosidase ATY48_08620 PF16355 ATY48_08620 ATY48_08625 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ATY48_08625 PF07745 Glycosyl hydrolase family 53 ATY48_08635 PF07715 TonB-dependent Receptor Plug Domain ATY48_08640 PF06114 Domain of unknown function (DUF955) ATY48_08640 PF09856 ATY48_08640 ATY48_08640 PF13560 Helix-turn-helix domain ATY48_08645 PF00171 Aldehyde dehydrogenase family ATY48_08650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATY48_08650 PF02770 Acyl-CoA dehydrogenase, middle domain ATY48_08650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATY48_08655 PF00378 Enoyl-CoA hydratase/isomerase family ATY48_08660 PF16113 ATY48_08660 ATY48_08665 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ATY48_08665 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ATY48_08670 PF01545 Cation efflux family ATY48_08675 PF00378 Enoyl-CoA hydratase/isomerase family ATY48_08675 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ATY48_08675 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ATY48_08680 PF04542 Sigma-70 region 2 ATY48_08680 PF08281 Sigma-70, region 4 ATY48_08685 PF03872 Anti sigma-E protein RseA, N-terminal domain ATY48_08690 PF13180 PDZ domain ATY48_08690 PF13365 Trypsin-like peptidase domain ATY48_08695 PF00009 Elongation factor Tu GTP binding domain ATY48_08695 PF00679 Elongation factor G C-terminus ATY48_08695 PF03144 Elongation factor Tu domain 2 ATY48_08695 PF06421 GTP-binding protein LepA C-terminus ATY48_08700 PF00717 Peptidase S24-like ATY48_08705 PF16137 ATY48_08705 ATY48_08710 PF00035 Double-stranded RNA binding motif ATY48_08710 PF14622 Ribonuclease-III-like ATY48_08715 PF01926 50S ribosome-binding GTPase ATY48_08715 PF07650 KH domain ATY48_08720 PF02565 Recombination protein O C terminal ATY48_08720 PF11967 Recombination protein O N terminal ATY48_08725 PF00072 Response regulator receiver domain ATY48_08725 PF01627 Hpt domain ATY48_08730 PF05958 tRNA (Uracil-5-)-methyltransferase ATY48_08735 PF01928 CYTH domain ATY48_08740 PF01610 ATY48_08740 ATY48_08740 PF13542 ATY48_08740 ATY48_08745 PF01609 Transposase DDE domain ATY48_08745 PF05598 ATY48_08745 ATY48_08750 PF01323 DSBA-like thioredoxin domain ATY48_08755 PF13450 NAD(P)-binding Rossmann-like domain ATY48_08760 PF04244 Deoxyribodipyrimidine photo-lyase-related protein ATY48_08765 PF00933 Glycosyl hydrolase family 3 N terminal domain ATY48_08770 PF00156 Phosphoribosyl transferase domain ATY48_08775 PF01048 Phosphorylase superfamily ATY48_08780 PF00313 'Cold-shock' DNA-binding domain ATY48_08795 PF01494 FAD binding domain ATY48_08800 PF00149 Calcineurin-like phosphoesterase ATY48_08805 PF00270 DEAD/DEAH box helicase ATY48_08805 PF00271 Helicase conserved C-terminal domain ATY48_08805 PF08494 ATY48_08805 ATY48_08810 PF01068 ATP dependent DNA ligase domain ATY48_08810 PF04675 DNA ligase N terminus ATY48_08810 PF04679 ATP dependent DNA ligase C terminal region ATY48_08830 PF04519 ATY48_08830 ATY48_08835 PF00990 GGDEF domain ATY48_08835 PF05227 CHASE3 domain ATY48_08850 PF00108 Thiolase, N-terminal domain ATY48_08850 PF02803 Thiolase, C-terminal domain ATY48_08855 PF00082 Subtilase family ATY48_08855 PF03797 Autotransporter beta-domain ATY48_08855 PF12951 ATY48_08855 ATY48_08860 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ATY48_08860 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ATY48_08865 PF01863 Protein of unknown function DUF45 ATY48_08870 PF10982 Protein of unknown function (DUF2789) ATY48_08875 PF01258 Prokaryotic dksA/traR C4-type zinc finger ATY48_08880 PF00924 Mechanosensitive ion channel ATY48_08885 PF01609 Transposase DDE domain ATY48_08895 PF13546 ATY48_08895 ATY48_08905 PF00012 Hsp70 protein ATY48_08910 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATY48_08915 PF01610 ATY48_08915 ATY48_08915 PF13542 ATY48_08915 ATY48_08920 PF01545 Cation efflux family ATY48_08925 PF03831 PhnA protein ATY48_08925 PF08274 PhnA Zinc-Ribbon ATY48_08935 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ATY48_08940 PF07690 Major Facilitator Superfamily ATY48_08945 PF01609 Transposase DDE domain ATY48_08955 PF09537 Domain of unknown function (DUF2383) ATY48_08960 PF13563 2'-5' RNA ligase superfamily ATY48_08970 PF09791 ATY48_08970 ATY48_08975 PF06057 Bacterial virulence protein (VirJ) ATY48_08980 PF13586 ATY48_08980 ATY48_08990 PF03706 ATY48_08990 ATY48_08990 PF09924 Uncharacterized conserved protein (DUF2156) ATY48_08995 PF06197 ATY48_08995 ATY48_09000 PF01042 Endoribonuclease L-PSP ATY48_09005 PF02353 Mycolic acid cyclopropane synthetase ATY48_09010 PF06966 ATY48_09010 ATY48_09015 PF11086 ATY48_09015 ATY48_09020 PF02353 Mycolic acid cyclopropane synthetase ATY48_09025 PF07103 ATY48_09025 ATY48_09030 PF01593 Flavin containing amine oxidoreductase ATY48_09035 PF00487 ATY48_09035 ATY48_09040 PF10099 ATY48_09040 ATY48_09045 PF04542 Sigma-70 region 2 ATY48_09045 PF08281 Sigma-70, region 4 ATY48_09065 PF04060 Putative Fe-S cluster ATY48_09065 PF14697 4Fe-4S dicluster domain ATY48_09070 PF12710 haloacid dehalogenase-like hydrolase ATY48_09075 PF01588 Putative tRNA binding domain ATY48_09075 PF09334 tRNA synthetases class I (M) ATY48_09080 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) ATY48_09090 PF13358 DDE superfamily endonuclease ATY48_09090 PF13551 Winged helix-turn helix ATY48_09090 PF13592 ATY48_09090 ATY48_09095 PF00324 Amino acid permease ATY48_09100 PF02574 Homocysteine S-methyltransferase ATY48_09105 PF05960 Bacterial protein of unknown function (DUF885) ATY48_09110 PF02592 ATY48_09110 ATY48_09115 PF04367 ATY48_09115 ATY48_09125 PF01609 Transposase DDE domain ATY48_09125 PF05598 ATY48_09125 ATY48_09130 PF08845 ATY48_09130 ATY48_09135 PF05598 ATY48_09135 ATY48_09155 PF05598 ATY48_09155 ATY48_09165 PF06850 ATY48_09165 ATY48_09175 PF03653 ATY48_09175 ATY48_09190 PF12040 ATY48_09190 ATY48_09190 PF12679 ATY48_09190 ATY48_09195 PF12040 ATY48_09195 ATY48_09200 PF00005 ABC transporter ATY48_09205 PF00593 TonB dependent receptor ATY48_09205 PF07715 TonB-dependent Receptor Plug Domain ATY48_09210 PF05598 ATY48_09210 ATY48_09215 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ATY48_09220 PF01336 OB-fold nucleic acid binding domain ATY48_09220 PF02811 PHP domain ATY48_09220 PF07733 Bacterial DNA polymerase III alpha subunit ATY48_09220 PF14579 Helix-hairpin-helix motif ATY48_09225 PF01351 Ribonuclease HII ATY48_09230 PF02684 ATY48_09230 ATY48_09235 PF00132 Bacterial transferase hexapeptide (six repeats) ATY48_09235 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ATY48_09240 PF07977 FabA-like domain ATY48_09245 PF00132 Bacterial transferase hexapeptide (six repeats) ATY48_09245 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ATY48_09250 PF01103 Surface antigen ATY48_09250 PF07244 Surface antigen variable number repeat ATY48_09255 PF02163 Peptidase family M50 ATY48_09260 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ATY48_09260 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal ATY48_09260 PF13288 DXP reductoisomerase C-terminal domain ATY48_09265 PF01148 Cytidylyltransferase family ATY48_09270 PF01255 Putative undecaprenyl diphosphate synthase ATY48_09275 PF01765 Ribosome recycling factor ATY48_09280 PF00696 Amino acid kinase family ATY48_09285 PF08668 HDOD domain ATY48_09290 PF00889 Elongation factor TS ATY48_09295 PF00318 Ribosomal protein S2 ATY48_09300 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ATY48_09310 PF05229 ATY48_09310 ATY48_09315 PF00577 Outer membrane usher protein ATY48_09315 PF13953 PapC C-terminal domain ATY48_09320 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ATY48_09325 PF05229 ATY48_09325 ATY48_09330 PF00557 Metallopeptidase family M24 ATY48_09335 PF01909 Nucleotidyltransferase domain ATY48_09335 PF01966 HD domain ATY48_09335 PF08335 GlnD PII-uridylyltransferase ATY48_09340 PF00132 Bacterial transferase hexapeptide (six repeats) ATY48_09340 PF14602 Hexapeptide repeat of succinyl-transferase ATY48_09340 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ATY48_09350 PF03960 ArsC family ATY48_09355 PF13508 Acetyltransferase (GNAT) domain ATY48_09360 PF01546 Peptidase family M20/M25/M40 ATY48_09360 PF07687 Peptidase dimerisation domain ATY48_09365 PF00733 Asparagine synthase ATY48_09365 PF13537 Glutamine amidotransferase domain ATY48_09370 PF13229 Right handed beta helix region ATY48_09380 PF00593 TonB dependent receptor ATY48_09380 PF07715 TonB-dependent Receptor Plug Domain ATY48_09385 PF01804 Penicillin amidase ATY48_09390 PF00210 Ferritin-like domain ATY48_09395 PF00521 DNA gyrase/topoisomerase IV, subunit A ATY48_09395 PF03989 DNA gyrase C-terminal domain, beta-propeller ATY48_09405 PF01047 MarR family ATY48_09410 PF02321 Outer membrane efflux protein ATY48_09415 PF00529 HlyD family secretion protein ATY48_09415 PF16576 ATY48_09415 ATY48_09420 PF07690 Major Facilitator Superfamily ATY48_09425 PF00144 Beta-lactamase ATY48_09430 PF13586 ATY48_09430 ATY48_09450 PF12760 Transposase zinc-ribbon domain ATY48_09450 PF12762 ATY48_09450 ATY48_09455 PF00665 Integrase core domain ATY48_09460 PF13936 Helix-turn-helix domain ATY48_09470 PF04101 Glycosyltransferase family 28 C-terminal domain ATY48_09475 PF02779 Transketolase, pyrimidine binding domain ATY48_09475 PF02780 Transketolase, C-terminal domain ATY48_09475 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ATY48_09480 PF14279 ATY48_09480 ATY48_09485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATY48_09485 PF02770 Acyl-CoA dehydrogenase, middle domain ATY48_09485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATY48_09485 PF12418 ATY48_09485 ATY48_09485 PF12806 ATY48_09485 ATY48_09490 PF03168 Late embryogenesis abundant protein ATY48_09500 PF00082 Subtilase family ATY48_09505 PF01668 SmpB protein ATY48_09510 PF03364 Polyketide cyclase / dehydrase and lipid transport ATY48_09515 PF03658 RnfH family Ubiquitin ATY48_09520 PF04355 SmpA / OmlA family ATY48_09525 PF01475 Ferric uptake regulator family ATY48_09530 PF02463 RecF/RecN/SMC N terminal domain ATY48_09535 PF01628 HrcA protein C terminal domain ATY48_09535 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding ATY48_09540 PF01025 GrpE ATY48_09545 PF00012 Hsp70 protein ATY48_09550 PF00226 DnaJ domain ATY48_09550 PF00684 DnaJ central domain ATY48_09550 PF01556 DnaJ C terminal domain ATY48_09555 PF08543 Phosphomethylpyrimidine kinase ATY48_09560 PF01842 ACT domain ATY48_09560 PF02153 Prephenate dehydrogenase ATY48_09565 PF13546 ATY48_09565 ATY48_09570 PF02321 Outer membrane efflux protein ATY48_09575 PF03466 LysR substrate binding domain ATY48_09580 PF00005 ABC transporter ATY48_09580 PF00664 ABC transporter transmembrane region ATY48_09585 PF01205 Uncharacterized protein family UPF0029 ATY48_09585 PF09186 Domain of unknown function (DUF1949) ATY48_09590 PF03641 Possible lysine decarboxylase ATY48_09595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ATY48_09595 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY48_09600 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ATY48_09600 PF00364 Biotin-requiring enzyme ATY48_09600 PF02817 e3 binding domain ATY48_09605 PF00676 Dehydrogenase E1 component ATY48_09605 PF02779 Transketolase, pyrimidine binding domain ATY48_09605 PF16078 ATY48_09605 ATY48_09605 PF16870 ATY48_09605 ATY48_09610 PF13673 Acetyltransferase (GNAT) domain ATY48_09615 PF08007 Cupin superfamily protein ATY48_09620 PF13180 PDZ domain ATY48_09625 PF11259 ATY48_09625 ATY48_09630 PF00206 Lyase ATY48_09630 PF08328 Adenylosuccinate lyase C-terminal ATY48_09645 PF13358 DDE superfamily endonuclease ATY48_09645 PF13551 Winged helix-turn helix ATY48_09645 PF13592 ATY48_09645 ATY48_09650 PF13340 ATY48_09650 ATY48_09655 PF13586 ATY48_09655 ATY48_09660 PF00665 Integrase core domain ATY48_09665 PF13936 Helix-turn-helix domain ATY48_09670 PF00206 Lyase ATY48_09670 PF10415 Fumarase C C-terminus ATY48_09690 PF13349 ATY48_09690 ATY48_09700 PF00005 ABC transporter ATY48_09705 PF00392 Bacterial regulatory proteins, gntR family ATY48_09715 PF00255 Glutathione peroxidase ATY48_09720 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATY48_09720 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ATY48_09725 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ATY48_09725 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ATY48_09725 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ATY48_09730 PF04102 SlyX ATY48_09735 PF09831 ATY48_09735 ATY48_09740 PF13557 ATY48_09740 ATY48_09745 PF00356 Bacterial regulatory proteins, lacI family ATY48_09745 PF13377 Periplasmic binding protein-like domain ATY48_09750 PF07690 Major Facilitator Superfamily ATY48_09755 PF00294 pfkB family carbohydrate kinase ATY48_09760 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) ATY48_09765 PF00809 Pterin binding enzyme ATY48_09765 PF02310 B12 binding domain ATY48_09765 PF02607 B12 binding domain ATY48_09765 PF02965 Vitamin B12 dependent methionine synthase, activation domain ATY48_09770 PF02574 Homocysteine S-methyltransferase ATY48_09775 PF01022 Bacterial regulatory protein, arsR family ATY48_09775 PF08241 Methyltransferase domain ATY48_09780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATY48_09780 PF02770 Acyl-CoA dehydrogenase, middle domain ATY48_09780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATY48_09790 PF13472 GDSL-like Lipase/Acylhydrolase family ATY48_09800 PF00575 S1 RNA binding domain ATY48_09800 PF00773 RNB domain ATY48_09800 PF08206 Ribonuclease B OB domain ATY48_09805 PF01609 Transposase DDE domain ATY48_09810 PF13340 ATY48_09810 ATY48_09815 PF04828 Glutathione-dependent formaldehyde-activating enzyme ATY48_09820 PF00588 SpoU rRNA Methylase family ATY48_09820 PF08032 RNA 2'-O ribose methyltransferase substrate binding ATY48_09830 PF01609 Transposase DDE domain ATY48_09830 PF05598 ATY48_09830 ATY48_09835 PF13546 ATY48_09835 ATY48_09840 PF12760 Transposase zinc-ribbon domain ATY48_09840 PF12762 ATY48_09840 ATY48_09845 PF00872 ATY48_09845 ATY48_09850 PF05598 ATY48_09850 ATY48_09855 PF00313 'Cold-shock' DNA-binding domain ATY48_09860 PF00561 alpha/beta hydrolase fold ATY48_09865 PF13546 ATY48_09865 ATY48_09870 PF01609 Transposase DDE domain ATY48_09870 PF05598 ATY48_09870 ATY48_09875 PF13546 ATY48_09875 ATY48_09880 PF01609 Transposase DDE domain ATY48_09880 PF05598 ATY48_09880 ATY48_09885 PF13546 ATY48_09885 ATY48_09890 PF01609 Transposase DDE domain ATY48_09895 PF12760 Transposase zinc-ribbon domain ATY48_09895 PF12762 ATY48_09895 ATY48_09900 PF01609 Transposase DDE domain ATY48_09900 PF05598 ATY48_09900 ATY48_09905 PF12762 ATY48_09905 ATY48_09910 PF01609 Transposase DDE domain ATY48_09920 PF01609 Transposase DDE domain ATY48_09925 PF12760 Transposase zinc-ribbon domain ATY48_09925 PF12762 ATY48_09925 ATY48_09930 PF01609 Transposase DDE domain ATY48_09935 PF01609 Transposase DDE domain ATY48_09935 PF05598 ATY48_09935 ATY48_09940 PF01610 ATY48_09940 ATY48_09940 PF13542 ATY48_09940 ATY48_09945 PF13546 ATY48_09945 ATY48_09950 PF05598 ATY48_09950 ATY48_09955 PF13276 ATY48_09955 ATY48_09955 PF13683 ATY48_09955 ATY48_09960 PF01527 Transposase ATY48_09965 PF03544 Gram-negative bacterial TonB protein C-terminal ATY48_09970 PF03544 Gram-negative bacterial TonB protein C-terminal ATY48_09975 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ATY48_09975 PF02403 Seryl-tRNA synthetase N-terminal domain ATY48_09980 PF01609 Transposase DDE domain ATY48_09985 PF13546 ATY48_09985 ATY48_09990 PF01609 Transposase DDE domain ATY48_09990 PF05598 ATY48_09990 ATY48_09995 PF02525 Flavodoxin-like fold ATY48_10000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY48_10000 PF03466 LysR substrate binding domain ATY48_10015 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY48_10030 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY48_10045 PF05598 ATY48_10045 ATY48_10050 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY48_10055 PF13546 ATY48_10055 ATY48_10065 PF01650 Peptidase C13 family ATY48_10075 PF03079 ARD/ARD' family ATY48_10080 PF00596 Class II Aldolase and Adducin N-terminal domain ATY48_10085 PF13520 Amino acid permease ATY48_10090 PF13520 Amino acid permease ATY48_10095 PF00293 NUDIX domain ATY48_10100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ATY48_10100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATY48_10105 PF01565 FAD binding domain ATY48_10105 PF02913 FAD linked oxidases, C-terminal domain ATY48_10110 PF09498 ATY48_10110 ATY48_10120 PF13358 DDE superfamily endonuclease ATY48_10120 PF13551 Winged helix-turn helix ATY48_10120 PF13592 ATY48_10120 ATY48_10130 PF13683 ATY48_10130 ATY48_10135 PF13432 Tetratricopeptide repeat ATY48_10140 PF03918 Cytochrome C biogenesis protein ATY48_10145 PF08534 Redoxin ATY48_10150 PF01578 ATY48_10150 ATY48_10150 PF16327 ATY48_10150 ATY48_10155 PF03100 CcmE ATY48_10160 PF04995 ATY48_10160 ATY48_10165 PF01578 ATY48_10165 ATY48_10170 PF03379 ATY48_10170 ATY48_10175 PF00005 ABC transporter ATY48_10180 PF00155 Aminotransferase class I and II ATY48_10185 PF00795 Carbon-nitrogen hydrolase ATY48_10190 PF12760 Transposase zinc-ribbon domain ATY48_10190 PF12762 ATY48_10190 ATY48_10195 PF05096 Glutamine cyclotransferase ATY48_10205 PF00849 RNA pseudouridylate synthase ATY48_10205 PF01479 S4 domain ATY48_10210 PF04079 Putative transcriptional regulators (Ypuh-like) ATY48_10215 PF02616 ScpA/B protein ATY48_10220 PF03795 YCII-related domain ATY48_10225 PF01722 BolA-like protein ATY48_10230 PF00356 Bacterial regulatory proteins, lacI family ATY48_10230 PF13377 Periplasmic binding protein-like domain ATY48_10235 PF00593 TonB dependent receptor ATY48_10235 PF07715 TonB-dependent Receptor Plug Domain ATY48_10240 PF10091 Putative glucoamylase ATY48_10245 PF13416 Bacterial extracellular solute-binding protein ATY48_10250 PF00528 Binding-protein-dependent transport system inner membrane component ATY48_10255 PF00528 Binding-protein-dependent transport system inner membrane component ATY48_10260 PF00754 F5/8 type C domain ATY48_10260 PF06202 Amylo-alpha-1,6-glucosidase ATY48_10270 PF01963 ATY48_10270 ATY48_10275 PF13420 Acetyltransferase (GNAT) domain ATY48_10280 PF00795 Carbon-nitrogen hydrolase ATY48_10285 PF04371 Porphyromonas-type peptidyl-arginine deiminase ATY48_10295 PF00444 Ribosomal protein L36 ATY48_10300 PF02224 Cytidylate kinase ATY48_10305 PF00575 S1 RNA binding domain ATY48_10310 PF00216 Bacterial DNA-binding protein ATY48_10315 PF06305 ATY48_10315 ATY48_10320 PF13432 Tetratricopeptide repeat ATY48_10325 PF00953 Glycosyl transferase family 4 ATY48_10330 PF02719 Polysaccharide biosynthesis protein ATY48_10330 PF13727 CoA-binding domain ATY48_10335 PF00483 Nucleotidyl transferase ATY48_10340 PF00999 Sodium/hydrogen exchanger family ATY48_10360 PF01609 Transposase DDE domain ATY48_10370 PF06844 Protein of unknown function (DUF1244) ATY48_10375 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ATY48_10375 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ATY48_10380 PF00478 IMP dehydrogenase / GMP reductase domain ATY48_10380 PF00571 CBS domain ATY48_10385 PF00117 Glutamine amidotransferase class-I ATY48_10385 PF00958 GMP synthase C terminal domain ATY48_10385 PF02540 NAD synthase ATY48_10390 PF10070 ATY48_10390 ATY48_10395 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains ATY48_10395 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ATY48_10400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY48_10400 PF03466 LysR substrate binding domain ATY48_10415 PF03601 ATY48_10415 ATY48_10420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY48_10425 PF03466 LysR substrate binding domain ATY48_10435 PF17201 ATY48_10435 ATY48_10440 PF01566 ATY48_10440 ATY48_10445 PF01325 Iron dependent repressor, N-terminal DNA binding domain ATY48_10445 PF02742 Iron dependent repressor, metal binding and dimerisation domain ATY48_10450 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ATY48_10455 PF00929 Exonuclease ATY48_10460 PF00924 Mechanosensitive ion channel ATY48_10465 PF00391 PEP-utilising enzyme, mobile domain ATY48_10465 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ATY48_10465 PF02896 PEP-utilising enzyme, TIM barrel domain ATY48_10470 PF03618 ATY48_10470 ATY48_10475 PF06853 ATY48_10475 ATY48_10480 PF00293 NUDIX domain ATY48_10495 PF13546 ATY48_10495 ATY48_10500 PF13561 Enoyl-(Acyl carrier protein) reductase ATY48_10505 PF01066 CDP-alcohol phosphatidyltransferase ATY48_10510 PF09712 ATY48_10510 ATY48_10515 PF00561 alpha/beta hydrolase fold ATY48_10520 PF04024 ATY48_10520 ATY48_10530 PF01266 FAD dependent oxidoreductase ATY48_10540 PF00575 S1 RNA binding domain ATY48_10540 PF09371 Tex-like protein N-terminal domain ATY48_10540 PF12836 Helix-hairpin-helix motif ATY48_10540 PF16921 ATY48_10540 ATY48_10550 PF00072 Response regulator receiver domain ATY48_10550 PF02954 Bacterial regulatory protein, Fis family ATY48_10555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_10560 PF04551 GcpE protein ATY48_10565 PF01569 PAP2 superfamily ATY48_10570 PF13546 ATY48_10570 ATY48_10575 PF07690 Major Facilitator Superfamily ATY48_10580 PF00665 Integrase core domain ATY48_10580 PF13936 Helix-turn-helix domain ATY48_10590 PF00892 EamA-like transporter family ATY48_10595 PF01565 FAD binding domain ATY48_10595 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ATY48_10600 PF01180 Dihydroorotate dehydrogenase ATY48_10605 PF08241 Methyltransferase domain ATY48_10610 PF13828 ATY48_10610 ATY48_10615 PF00171 Aldehyde dehydrogenase family ATY48_10625 PF03073 TspO/MBR family ATY48_10630 PF00696 Amino acid kinase family ATY48_10630 PF00742 Homoserine dehydrogenase ATY48_10630 PF03447 Homoserine dehydrogenase, NAD binding domain ATY48_10630 PF13840 ACT domain ATY48_10635 PF00288 GHMP kinases N terminal domain ATY48_10635 PF08544 GHMP kinases C terminal ATY48_10645 PF07110 EthD domain ATY48_10650 PF00291 Pyridoxal-phosphate dependent enzyme ATY48_10650 PF14821 Threonine synthase N terminus ATY48_10655 PF13645 ATY48_10655 ATY48_10665 PF03129 Anticodon binding domain ATY48_10665 PF13393 Histidyl-tRNA synthetase ATY48_10670 PF01609 Transposase DDE domain ATY48_10675 PF01371 Trp repressor protein ATY48_10680 PF01634 ATP phosphoribosyltransferase ATY48_10680 PF08029 HisG, C-terminal domain ATY48_10685 PF00815 Histidinol dehydrogenase ATY48_10690 PF00155 Aminotransferase class I and II ATY48_10695 PF00475 Imidazoleglycerol-phosphate dehydratase ATY48_10695 PF13242 HAD-hyrolase-like ATY48_10700 PF00117 Glutamine amidotransferase class-I ATY48_10705 PF00977 Histidine biosynthesis protein ATY48_10710 PF00977 Histidine biosynthesis protein ATY48_10715 PF01502 Phosphoribosyl-AMP cyclohydrolase ATY48_10715 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ATY48_10720 PF16371 ATY48_10720 ATY48_10725 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY48_10740 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY48_10745 PF16380 ATY48_10745 ATY48_10760 PF02486 ATY48_10760 ATY48_10765 PF02303 Helix-destabilising protein ATY48_10780 PF10734 ATY48_10780 ATY48_10785 PF05707 Zonular occludens toxin (Zot) ATY48_10800 PF05857 ATY48_10800 ATY48_10805 PF05707 Zonular occludens toxin (Zot) ATY48_10810 PF10734 ATY48_10810 ATY48_10820 PF10389 Bacteriophage coat protein B ATY48_10830 PF02303 Helix-destabilising protein ATY48_10835 PF11726 ATY48_10835 ATY48_10860 PF13340 ATY48_10860 ATY48_10865 PF13586 ATY48_10865 ATY48_10880 PF13340 ATY48_10880 ATY48_10885 PF13586 ATY48_10885 ATY48_10890 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY48_10905 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY48_10910 PF13340 ATY48_10910 ATY48_10915 PF13586 ATY48_10915 ATY48_10930 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY48_10945 PF13936 Helix-turn-helix domain ATY48_10955 PF13936 Helix-turn-helix domain ATY48_10960 PF01609 Transposase DDE domain ATY48_10960 PF05598 ATY48_10960 ATY48_10965 PF13546 ATY48_10965 ATY48_10970 PF12760 Transposase zinc-ribbon domain ATY48_10970 PF12762 ATY48_10970 ATY48_10975 PF05593 ATY48_10975 ATY48_10980 PF00872 ATY48_10980 ATY48_10985 PF00665 Integrase core domain ATY48_10990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ATY48_11010 PF01066 CDP-alcohol phosphatidyltransferase ATY48_11015 PF01541 GIY-YIG catalytic domain ATY48_11015 PF02151 UvrB/uvrC motif ATY48_11015 PF08459 UvrC Helix-hairpin-helix N-terminal ATY48_11020 PF01436 NHL repeat ATY48_11025 PF01451 Low molecular weight phosphotyrosine protein phosphatase ATY48_11030 PF02348 Cytidylyltransferase ATY48_11035 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ATY48_11040 PF00005 ABC transporter ATY48_11040 PF00664 ABC transporter transmembrane region ATY48_11045 PF02472 Biopolymer transport protein ExbD/TolR ATY48_11050 PF01618 ATY48_11050 ATY48_11055 PF00753 Metallo-beta-lactamase superfamily ATY48_11055 PF03772 ATY48_11055 ATY48_11055 PF13567 ATY48_11055 ATY48_11060 PF12760 Transposase zinc-ribbon domain ATY48_11060 PF12762 ATY48_11060 ATY48_11070 PF00005 ABC transporter ATY48_11075 PF02687 ATY48_11075 ATY48_11075 PF12704 MacB-like periplasmic core domain ATY48_11085 PF03937 Flavinator of succinate dehydrogenase ATY48_11090 PF13085 2Fe-2S iron-sulfur cluster binding domain ATY48_11090 PF13534 4Fe-4S dicluster domain ATY48_11100 PF00890 FAD binding domain ATY48_11100 PF02910 Fumarate reductase flavoprotein C-term ATY48_11105 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ATY48_11110 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ATY48_11115 PF01571 Aminomethyltransferase folate-binding domain ATY48_11115 PF08669 Glycine cleavage T-protein C-terminal barrel domain ATY48_11120 PF00005 ABC transporter ATY48_11120 PF08402 TOBE domain ATY48_11125 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ATY48_11125 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ATY48_11130 PF02685 Glucokinase ATY48_11135 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ATY48_11140 PF00920 Dehydratase family ATY48_11145 PF01081 KDPG and KHG aldolase ATY48_11150 PF05598 ATY48_11150 ATY48_11155 PF01609 Transposase DDE domain ATY48_11175 PF00072 Response regulator receiver domain ATY48_11180 PF00072 Response regulator receiver domain ATY48_11180 PF00512 His Kinase A (phospho-acceptor) domain ATY48_11180 PF01590 GAF domain ATY48_11180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_11180 PF08447 PAS fold ATY48_11180 PF08448 PAS fold ATY48_11180 PF13185 GAF domain ATY48_11185 PF13358 DDE superfamily endonuclease ATY48_11185 PF13592 ATY48_11185 ATY48_11190 PF13340 ATY48_11190 ATY48_11195 PF13586 ATY48_11195 ATY48_11210 PF00990 GGDEF domain ATY48_11230 PF13358 DDE superfamily endonuclease ATY48_11235 PF13518 Helix-turn-helix domain ATY48_11240 PF02253 Phospholipase A1 ATY48_11245 PF13410 Glutathione S-transferase, C-terminal domain ATY48_11250 PF05681 ATY48_11250 ATY48_11250 PF05683 Fumarase C-terminus ATY48_11255 PF00005 ABC transporter ATY48_11260 PF00175 Oxidoreductase NAD-binding domain ATY48_11260 PF00970 Oxidoreductase FAD-binding domain ATY48_11265 PF00255 Glutathione peroxidase ATY48_11275 PF08279 HTH domain ATY48_11285 PF00082 Subtilase family ATY48_11290 PF04542 Sigma-70 region 2 ATY48_11290 PF08281 Sigma-70, region 4 ATY48_11300 PF01047 MarR family ATY48_11310 PF14542 GCN5-related N-acetyl-transferase ATY48_11320 PF01694 Rhomboid family ATY48_11325 PF00854 POT family ATY48_11330 PF00246 Zinc carboxypeptidase ATY48_11335 PF00933 Glycosyl hydrolase family 3 N terminal domain ATY48_11335 PF01915 Glycosyl hydrolase family 3 C-terminal domain ATY48_11335 PF14310 Fibronectin type III-like domain ATY48_11350 PF00563 EAL domain ATY48_11350 PF00990 GGDEF domain ATY48_11350 PF01590 GAF domain ATY48_11355 PF00474 Sodium:solute symporter family ATY48_11360 PF00933 Glycosyl hydrolase family 3 N terminal domain ATY48_11360 PF01915 Glycosyl hydrolase family 3 C-terminal domain ATY48_11365 PF05787 Bacterial protein of unknown function (DUF839) ATY48_11375 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system ATY48_11380 PF00342 Phosphoglucose isomerase ATY48_11385 PF02261 Aspartate decarboxylase ATY48_11390 PF02569 Pantoate-beta-alanine ligase ATY48_11395 PF02548 Ketopantoate hydroxymethyltransferase ATY48_11400 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ATY48_11405 PF01743 Poly A polymerase head domain ATY48_11405 PF12626 Polymerase A arginine-rich C-terminus ATY48_11405 PF12627 Probable RNA and SrmB- binding site of polymerase A ATY48_11415 PF02649 Type I GTP cyclohydrolase folE2 ATY48_11420 PF01520 N-acetylmuramoyl-L-alanine amidase ATY48_11420 PF11741 AMIN domain ATY48_11425 PF05598 ATY48_11425 ATY48_11440 PF01609 Transposase DDE domain ATY48_11440 PF05598 ATY48_11440 ATY48_11445 PF00082 Subtilase family ATY48_11445 PF03797 Autotransporter beta-domain ATY48_11445 PF12951 ATY48_11445 ATY48_11450 PF16576 ATY48_11450 ATY48_11455 PF00873 AcrB/AcrD/AcrF family ATY48_11460 PF02321 Outer membrane efflux protein ATY48_11465 PF00512 His Kinase A (phospho-acceptor) domain ATY48_11465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_11470 PF00072 Response regulator receiver domain ATY48_11470 PF00196 Bacterial regulatory proteins, luxR family ATY48_11475 PF12951 ATY48_11475 ATY48_11475 PF13018 ATY48_11475 ATY48_11480 PF01527 Transposase ATY48_11485 PF01609 Transposase DDE domain ATY48_11490 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ATY48_11495 PF00800 Prephenate dehydratase ATY48_11495 PF01817 Chorismate mutase type II ATY48_11495 PF01842 ACT domain ATY48_11500 PF00266 Aminotransferase class-V ATY48_11505 PF00174 Oxidoreductase molybdopterin binding domain ATY48_11515 PF01794 ATY48_11515 ATY48_11520 PF16697 ATY48_11520 ATY48_11525 PF09650 ATY48_11525 ATY48_11530 PF05597 ATY48_11530 ATY48_11535 PF04471 Restriction endonuclease ATY48_11540 PF00392 Bacterial regulatory proteins, gntR family ATY48_11540 PF07702 UTRA domain ATY48_11545 PF01979 Amidohydrolase family ATY48_11550 PF07969 Amidohydrolase family ATY48_11555 PF00221 Aromatic amino acid lyase ATY48_11560 PF05013 N-formylglutamate amidohydrolase ATY48_11565 PF01175 Urocanase ATY48_11565 PF17391 ATY48_11565 ATY48_11565 PF17392 ATY48_11565 ATY48_11570 PF01757 ATY48_11570 ATY48_11580 PF13276 ATY48_11580 ATY48_11585 PF01527 Transposase ATY48_11590 PF00521 DNA gyrase/topoisomerase IV, subunit A ATY48_11590 PF03989 DNA gyrase C-terminal domain, beta-propeller ATY48_11595 PF01008 Initiation factor 2 subunit family ATY48_11600 PF11218 ATY48_11600 ATY48_11605 PF00152 tRNA synthetases class II (D, K and N) ATY48_11610 PF00533 BRCA1 C Terminus (BRCT) domain ATY48_11610 PF01653 NAD-dependent DNA ligase adenylation domain ATY48_11610 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ATY48_11610 PF03120 NAD-dependent DNA ligase OB-fold domain ATY48_11610 PF12826 Helix-hairpin-helix motif ATY48_11620 PF04354 ZipA, C-terminal FtsZ-binding domain ATY48_11625 PF02463 RecF/RecN/SMC N terminal domain ATY48_11630 PF01281 Ribosomal protein L9, N-terminal domain ATY48_11630 PF03948 Ribosomal protein L9, C-terminal domain ATY48_11635 PF01084 Ribosomal protein S18 ATY48_11640 PF01250 Ribosomal protein S6 ATY48_11645 PF01521 Iron-sulphur cluster biosynthesis ATY48_11650 PF00152 tRNA synthetases class II (D, K and N) ATY48_11650 PF01336 OB-fold nucleic acid binding domain ATY48_11670 PF04299 Putative FMN-binding domain ATY48_11680 PF00484 Carbonic anhydrase ATY48_11685 PF06052 3-hydroxyanthranilic acid dioxygenase ATY48_11695 PF00266 Aminotransferase class-V ATY48_11700 PF01494 FAD binding domain ATY48_11705 PF00929 Exonuclease ATY48_11705 PF08411 Exonuclease C-terminal ATY48_11710 PF09365 ATY48_11710 ATY48_11715 PF00248 Aldo/keto reductase family ATY48_11720 PF11159 ATY48_11720 ATY48_11725 PF06189 ATY48_11725 ATY48_11730 PF01513 ATP-NAD kinase ATY48_11735 PF01170 Putative RNA methylase family UPF0020 ATY48_11735 PF02926 THUMP domain ATY48_11735 PF10672 S-adenosylmethionine-dependent methyltransferase ATY48_11745 PF00005 ABC transporter ATY48_11750 PF00005 ABC transporter ATY48_11755 PF00005 ABC transporter ATY48_11760 PF00583 Acetyltransferase (GNAT) family ATY48_11765 PF05728 Uncharacterised protein family (UPF0227) ATY48_11770 PF03473 MOSC domain ATY48_11775 PF01510 N-acetylmuramoyl-L-alanine amidase ATY48_11780 PF07920 Protein of unknown function (DUF1684) ATY48_11785 PF00581 Rhodanese-like domain ATY48_11790 PF00293 NUDIX domain ATY48_11790 PF06945 ATY48_11790 ATY48_11795 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATY48_11795 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ATY48_11800 PF00378 Enoyl-CoA hydratase/isomerase family ATY48_11810 PF00633 Helix-hairpin-helix motif ATY48_11810 PF00730 HhH-GPD superfamily base excision DNA repair protein ATY48_11820 PF00484 Carbonic anhydrase ATY48_11825 PF01609 Transposase DDE domain ATY48_11825 PF05598 ATY48_11825 ATY48_11830 PF13586 ATY48_11830 ATY48_11835 PF01610 ATY48_11835 ATY48_11835 PF13542 ATY48_11835 ATY48_11840 PF13340 ATY48_11840 ATY48_11850 PF07396 Phosphate-selective porin O and P ATY48_11855 PF12849 PBP superfamily domain ATY48_11860 PF12849 PBP superfamily domain ATY48_11865 PF00528 Binding-protein-dependent transport system inner membrane component ATY48_11870 PF00528 Binding-protein-dependent transport system inner membrane component ATY48_11875 PF00005 ABC transporter ATY48_11880 PF01895 PhoU domain ATY48_11885 PF11776 Domain of unknown function (DUF3315) ATY48_11890 PF00929 Exonuclease ATY48_11895 PF13546 ATY48_11895 ATY48_11900 PF01609 Transposase DDE domain ATY48_11900 PF05598 ATY48_11900 ATY48_11905 PF00872 ATY48_11905 ATY48_11910 PF13546 ATY48_11910 ATY48_11930 PF13495 Phage integrase, N-terminal SAM-like domain ATY48_11935 PF02355 Protein export membrane protein ATY48_11935 PF07549 SecD/SecF GG Motif ATY48_11940 PF02355 Protein export membrane protein ATY48_11940 PF07549 SecD/SecF GG Motif ATY48_11940 PF13721 SecD export protein N-terminal TM region ATY48_11945 PF02699 Preprotein translocase subunit ATY48_11950 PF01702 Queuine tRNA-ribosyltransferase ATY48_11955 PF02547 Queuosine biosynthesis protein ATY48_11960 PF01037 AsnC family ATY48_11960 PF13412 Winged helix-turn-helix DNA-binding ATY48_11965 PF00202 Aminotransferase class-III ATY48_11975 PF04488 Glycosyltransferase sugar-binding region containing DXD motif ATY48_11990 PF05598 ATY48_11990 ATY48_11995 PF01609 Transposase DDE domain ATY48_12000 PF16656 ATY48_12000 ATY48_12005 PF02333 Phytase ATY48_12010 PF00593 TonB dependent receptor ATY48_12015 PF07715 TonB-dependent Receptor Plug Domain ATY48_12020 PF14681 Uracil phosphoribosyltransferase ATY48_12025 PF13340 ATY48_12025 ATY48_12030 PF13586 ATY48_12030 ATY48_12035 PF13358 DDE superfamily endonuclease ATY48_12035 PF13551 Winged helix-turn helix ATY48_12035 PF13592 ATY48_12035 ATY48_12040 PF01019 Gamma-glutamyltranspeptidase ATY48_12045 PF00037 4Fe-4S binding domain ATY48_12060 PF01467 Cytidylyltransferase ATY48_12065 PF03602 Conserved hypothetical protein 95 ATY48_12070 PF00183 Hsp90 protein ATY48_12070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_12075 PF13358 DDE superfamily endonuclease ATY48_12080 PF13551 Winged helix-turn helix ATY48_12080 PF13592 ATY48_12080 ATY48_12090 PF00581 Rhodanese-like domain ATY48_12090 PF00899 ThiF family ATY48_12100 PF12760 Transposase zinc-ribbon domain ATY48_12100 PF12762 ATY48_12100 ATY48_12105 PF01609 Transposase DDE domain ATY48_12105 PF05598 ATY48_12105 ATY48_12110 PF01609 Transposase DDE domain ATY48_12125 PF00665 Integrase core domain ATY48_12130 PF01609 Transposase DDE domain ATY48_12130 PF05598 ATY48_12130 ATY48_12140 PF13340 ATY48_12140 ATY48_12145 PF13551 Winged helix-turn helix ATY48_12150 PF13592 ATY48_12150 ATY48_12155 PF13358 DDE superfamily endonuclease ATY48_12160 PF00994 Probable molybdopterin binding domain ATY48_12160 PF03453 MoeA N-terminal region (domain I and II) ATY48_12160 PF03454 MoeA C-terminal region (domain IV) ATY48_12165 PF01926 50S ribosome-binding GTPase ATY48_12165 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ATY48_12170 PF13360 PQQ-like domain ATY48_12175 PF09976 Tetratricopeptide repeat ATY48_12180 PF13413 Helix-turn-helix domain ATY48_12180 PF13464 ATY48_12180 ATY48_12185 PF13432 Tetratricopeptide repeat ATY48_12190 PF04055 Radical SAM superfamily ATY48_12195 PF00334 Nucleoside diphosphate kinase ATY48_12200 PF00440 Bacterial regulatory proteins, tetR family ATY48_12205 PF00378 Enoyl-CoA hydratase/isomerase family ATY48_12205 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ATY48_12205 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ATY48_12210 PF00108 Thiolase, N-terminal domain ATY48_12210 PF02803 Thiolase, C-terminal domain ATY48_12215 PF00654 Voltage gated chloride channel ATY48_12225 PF02537 ATY48_12225 ATY48_12230 PF02641 Uncharacterized ACR, COG1993 ATY48_12235 PF00004 ATPase family associated with various cellular activities (AAA) ATY48_12235 PF12002 MgsA AAA+ ATPase C terminal ATY48_12235 PF16193 ATY48_12235 ATY48_12245 PF03548 Outer membrane lipoprotein carrier protein LolA ATY48_12255 PF01580 FtsK/SpoIIIE family ATY48_12255 PF09397 Ftsk gamma domain ATY48_12255 PF13491 ATY48_12255 ATY48_12260 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY48_12265 PF04339 ATY48_12265 ATY48_12270 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family ATY48_12280 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ATY48_12285 PF01176 Translation initiation factor 1A / IF-1 ATY48_12290 PF00004 ATPase family associated with various cellular activities (AAA) ATY48_12290 PF02861 Clp amino terminal domain ATY48_12290 PF07724 AAA domain (Cdc48 subfamily) ATY48_12290 PF10431 C-terminal, D2-small domain, of ClpB protein ATY48_12295 PF02617 ATP-dependent Clp protease adaptor protein ClpS ATY48_12300 PF00293 NUDIX domain ATY48_12305 PF03054 tRNA methyl transferase ATY48_12310 PF04356 Protein of unknown function (DUF489) ATY48_12315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY48_12330 PF00563 EAL domain ATY48_12330 PF00990 GGDEF domain ATY48_12330 PF08447 PAS fold ATY48_12335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_12335 PF07730 Histidine kinase ATY48_12335 PF08448 PAS fold ATY48_12335 PF13426 PAS domain ATY48_12340 PF00072 Response regulator receiver domain ATY48_12340 PF00563 EAL domain ATY48_12340 PF00990 GGDEF domain ATY48_12345 PF00512 His Kinase A (phospho-acceptor) domain ATY48_12345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_12355 PF04316 Anti-sigma-28 factor, FlgM ATY48_12360 PF13144 SAF-like ATY48_12365 PF00072 Response regulator receiver domain ATY48_12365 PF01584 CheW-like domain ATY48_12370 PF00460 Flagella basal body rod protein ATY48_12375 PF00460 Flagella basal body rod protein ATY48_12375 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATY48_12380 PF03963 ATY48_12380 ATY48_12380 PF13860 FlgD Ig-like domain ATY48_12380 PF13861 FlgD Tudor-like domain ATY48_12385 PF00460 Flagella basal body rod protein ATY48_12385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATY48_12385 PF07559 Flagellar basal body protein FlaE ATY48_12390 PF00460 Flagella basal body rod protein ATY48_12390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATY48_12395 PF00460 Flagella basal body rod protein ATY48_12395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATY48_12400 PF02107 ATY48_12400 ATY48_12405 PF02119 ATY48_12405 ATY48_12410 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ATY48_12410 PF10135 ATY48_12410 ATY48_12415 PF00460 Flagella basal body rod protein ATY48_12415 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATY48_12420 PF00669 Bacterial flagellin N-terminal helical region ATY48_12420 PF00700 Bacterial flagellin C-terminal helical region ATY48_12425 PF00669 Bacterial flagellin N-terminal helical region ATY48_12425 PF00700 Bacterial flagellin C-terminal helical region ATY48_12430 PF02465 ATY48_12430 ATY48_12430 PF07195 ATY48_12430 ATY48_12430 PF07196 Flagellin hook IN motif ATY48_12435 PF02561 Flagellar protein FliS ATY48_12445 PF16823 ATY48_12445 ATY48_12450 PF00072 Response regulator receiver domain ATY48_12450 PF00196 Bacterial regulatory proteins, luxR family ATY48_12455 PF00309 ATY48_12455 ATY48_12455 PF04552 Sigma-54, DNA binding domain ATY48_12455 PF04963 Sigma-54 factor, core binding domain ATY48_12460 PF00072 Response regulator receiver domain ATY48_12465 PF00158 Sigma-54 interaction domain ATY48_12465 PF02954 Bacterial regulatory protein, Fis family ATY48_12465 PF06490 ATY48_12465 ATY48_12470 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ATY48_12480 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ATY48_12480 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ATY48_12485 PF13561 Enoyl-(Acyl carrier protein) reductase ATY48_12490 PF13561 Enoyl-(Acyl carrier protein) reductase ATY48_12495 PF00132 Bacterial transferase hexapeptide (six repeats) ATY48_12500 PF00355 Rieske [2Fe-2S] domain ATY48_12500 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ATY48_12505 PF00132 Bacterial transferase hexapeptide (six repeats) ATY48_12510 PF05050 Methyltransferase FkbM domain ATY48_12515 PF00535 Glycosyl transferase family 2 ATY48_12520 PF02049 ATY48_12520 ATY48_12525 PF01514 Secretory protein of YscJ/FliF family ATY48_12525 PF08345 ATY48_12525 ATY48_12530 PF01706 FliG C-terminal domain ATY48_12530 PF14841 FliG middle domain ATY48_12530 PF14842 FliG N-terminal domain ATY48_12535 PF02108 ATY48_12535 ATY48_12540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATY48_12545 PF02050 Flagellar FliJ protein ATY48_12550 PF02120 Flagellar hook-length control protein FliK ATY48_12555 PF03748 ATY48_12555 ATY48_12560 PF01052 Surface presentation of antigens (SPOA) ATY48_12560 PF02154 Flagellar motor switch protein FliM ATY48_12565 PF01052 Surface presentation of antigens (SPOA) ATY48_12570 PF04347 ATY48_12570 ATY48_12575 PF00813 ATY48_12575 ATY48_12580 PF01313 ATY48_12580 ATY48_12585 PF01311 ATY48_12585 ATY48_12590 PF00990 GGDEF domain ATY48_12590 PF07494 Two component regulator propeller ATY48_12590 PF07495 Y_Y_Y domain ATY48_12595 PF00990 GGDEF domain ATY48_12595 PF07495 Y_Y_Y domain ATY48_12600 PF00563 EAL domain ATY48_12600 PF00990 GGDEF domain ATY48_12600 PF03707 ATY48_12600 ATY48_12605 PF01312 FlhB HrpN YscU SpaS Family ATY48_12610 PF00771 FHIPEP family ATY48_12615 PF00448 SRP54-type protein, GTPase domain ATY48_12620 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ATY48_12625 PF04539 Sigma-70 region 3 ATY48_12625 PF04542 Sigma-70 region 2 ATY48_12625 PF04545 Sigma-70, region 4 ATY48_12630 PF00072 Response regulator receiver domain ATY48_12635 PF04344 Chemotaxis phosphatase, CheZ ATY48_12640 PF01584 CheW-like domain ATY48_12640 PF01627 Hpt domain ATY48_12640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_12640 PF02895 Signal transducing histidine kinase, homodimeric domain ATY48_12650 PF13936 Helix-turn-helix domain ATY48_12655 PF00665 Integrase core domain ATY48_12670 PF13546 ATY48_12670 ATY48_12675 PF01609 Transposase DDE domain ATY48_12675 PF05598 ATY48_12675 ATY48_12685 PF13340 ATY48_12685 ATY48_12690 PF13586 ATY48_12690 ATY48_12705 PF01609 Transposase DDE domain ATY48_12705 PF05598 ATY48_12705 ATY48_12715 PF01609 Transposase DDE domain ATY48_12715 PF05598 ATY48_12715 ATY48_12730 PF12760 Transposase zinc-ribbon domain ATY48_12730 PF12762 ATY48_12730 ATY48_12735 PF00873 AcrB/AcrD/AcrF family ATY48_12745 PF00873 AcrB/AcrD/AcrF family ATY48_12755 PF16576 ATY48_12755 ATY48_12760 PF00034 Cytochrome c ATY48_12765 PF00034 Cytochrome c ATY48_12805 PF12760 Transposase zinc-ribbon domain ATY48_12805 PF12762 ATY48_12805 ATY48_12810 PF13546 ATY48_12810 ATY48_12815 PF00005 ABC transporter ATY48_12820 PF00005 ABC transporter ATY48_12820 PF00664 ABC transporter transmembrane region ATY48_12825 PF01654 ATY48_12825 ATY48_12830 PF13936 Helix-turn-helix domain ATY48_12835 PF01609 Transposase DDE domain ATY48_12835 PF05598 ATY48_12835 ATY48_12840 PF01654 ATY48_12840 ATY48_12845 PF02322 ATY48_12845 ATY48_12850 PF08173 ATY48_12850 ATY48_12860 PF07690 Major Facilitator Superfamily ATY48_12865 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ATY48_12865 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ATY48_12870 PF00171 Aldehyde dehydrogenase family ATY48_12875 PF00696 Amino acid kinase family ATY48_12875 PF01472 PUA domain ATY48_12880 PF03795 YCII-related domain ATY48_12885 PF07883 Cupin domain ATY48_12890 PF00206 Lyase ATY48_12895 PF01118 Semialdehyde dehydrogenase, NAD binding domain ATY48_12905 PF00696 Amino acid kinase family ATY48_12905 PF04768 Protein of unknown function (DUF619) ATY48_12910 PF01546 Peptidase family M20/M25/M40 ATY48_12910 PF07687 Peptidase dimerisation domain ATY48_12915 PF13508 Acetyltransferase (GNAT) domain ATY48_12920 PF00764 Arginosuccinate synthase ATY48_12925 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ATY48_12925 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ATY48_12935 PF01406 tRNA synthetases class I (C) catalytic domain ATY48_12935 PF09190 DALR domain ATY48_12940 PF02657 Fe-S metabolism associated domain ATY48_12945 PF05977 Transmembrane secretion effector ATY48_12950 PF03572 Peptidase family S41 ATY48_12955 PF01258 Prokaryotic dksA/traR C4-type zinc finger ATY48_12965 PF01809 ATY48_12965 ATY48_12970 PF01979 Amidohydrolase family ATY48_12975 PF01551 Peptidase family M23 ATY48_12980 PF05985 Ethanolamine ammonia-lyase light chain (EutC) ATY48_12985 PF13340 ATY48_12985 ATY48_12990 PF13586 ATY48_12990 ATY48_13000 PF16242 ATY48_13000 ATY48_13005 PF13546 ATY48_13005 ATY48_13010 PF01609 Transposase DDE domain ATY48_13010 PF05598 ATY48_13010 ATY48_13015 PF13546 ATY48_13015 ATY48_13020 PF01095 Pectinesterase ATY48_13030 PF00665 Integrase core domain ATY48_13040 PF00295 Glycosyl hydrolases family 28 ATY48_13050 PF13419 Haloacid dehalogenase-like hydrolase ATY48_13055 PF13489 Methyltransferase domain ATY48_13060 PF01979 Amidohydrolase family ATY48_13070 PF01132 Elongation factor P (EF-P) OB domain ATY48_13070 PF08207 Elongation factor P (EF-P) KOW-like domain ATY48_13070 PF09285 Elongation factor P, C-terminal ATY48_13075 PF13394 4Fe-4S single cluster domain ATY48_13080 PF00563 EAL domain ATY48_13080 PF00672 HAMP domain ATY48_13080 PF00990 GGDEF domain ATY48_13080 PF17203 ATY48_13080 ATY48_13085 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein ATY48_13090 PF00588 SpoU rRNA Methylase family ATY48_13095 PF00459 Inositol monophosphatase family ATY48_13100 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ATY48_13100 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ATY48_13105 PF00545 ribonuclease ATY48_13110 PF01337 Barstar (barnase inhibitor) ATY48_13120 PF00005 ABC transporter ATY48_13120 PF12848 ABC transporter ATY48_13120 PF16326 ATY48_13120 ATY48_13125 PF00270 DEAD/DEAH box helicase ATY48_13125 PF00271 Helicase conserved C-terminal domain ATY48_13125 PF03880 DbpA RNA binding domain ATY48_13130 PF00156 Phosphoribosyl transferase domain ATY48_13135 PF02696 ATY48_13135 ATY48_13140 PF00135 Carboxylesterase family ATY48_13145 PF00043 Glutathione S-transferase, C-terminal domain ATY48_13145 PF02798 Glutathione S-transferase, N-terminal domain ATY48_13150 PF00313 'Cold-shock' DNA-binding domain ATY48_13155 PF02639 ATY48_13155 ATY48_13160 PF07152 YaeQ protein ATY48_13165 PF03486 HI0933-like protein ATY48_13170 PF00563 EAL domain ATY48_13170 PF00990 GGDEF domain ATY48_13170 PF13188 PAS domain ATY48_13175 PF01435 Peptidase family M48 ATY48_13180 PF00749 tRNA synthetases class I (E and Q), catalytic domain ATY48_13185 PF13561 Enoyl-(Acyl carrier protein) reductase ATY48_13190 PF05233 ATY48_13190 ATY48_13190 PF07879 ATY48_13190 ATY48_13195 PF01963 ATY48_13195 ATY48_13200 PF07920 Protein of unknown function (DUF1684) ATY48_13205 PF01119 DNA mismatch repair protein, C-terminal domain ATY48_13205 PF08676 MutL C terminal dimerisation domain ATY48_13205 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_13210 PF01520 N-acetylmuramoyl-L-alanine amidase ATY48_13210 PF11741 AMIN domain ATY48_13215 PF02367 Uncharacterised P-loop hydrolase UPF0079 ATY48_13220 PF01256 Carbohydrate kinase ATY48_13220 PF03853 YjeF-related protein N-terminus ATY48_13225 PF08331 ATY48_13225 ATY48_13225 PF13484 ATY48_13225 ATY48_13230 PF13586 ATY48_13230 ATY48_13235 PF13340 ATY48_13235 ATY48_13240 PF02601 ATY48_13240 ATY48_13240 PF13742 ATY48_13240 ATY48_13245 PF06057 Bacterial virulence protein (VirJ) ATY48_13250 PF01609 Transposase DDE domain ATY48_13255 PF03781 Sulfatase-modifying factor enzyme 1 ATY48_13260 PF00570 HRDC domain ATY48_13260 PF01612 3'-5' exonuclease ATY48_13275 PF00816 H-NS histone family ATY48_13295 PF05016 Plasmid stabilisation system protein ATY48_13300 PF01402 Ribbon-helix-helix protein, copG family ATY48_13305 PF00872 ATY48_13305 ATY48_13310 PF12760 Transposase zinc-ribbon domain ATY48_13310 PF12762 ATY48_13310 ATY48_13325 PF11743 ATY48_13325 ATY48_13335 PF04386 Stringent starvation protein B ATY48_13340 PF00043 Glutathione S-transferase, C-terminal domain ATY48_13340 PF13417 Glutathione S-transferase, N-terminal domain ATY48_13345 PF02167 Cytochrome C1 family ATY48_13350 PF00032 Cytochrome b(C-terminal)/b6/petD ATY48_13350 PF00033 Cytochrome b(N-terminal)/b6/petB ATY48_13355 PF00355 Rieske [2Fe-2S] domain ATY48_13355 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ATY48_13360 PF01464 Transglycosylase SLT domain ATY48_13365 PF08279 HTH domain ATY48_13365 PF13280 ATY48_13365 ATY48_13370 PF02798 Glutathione S-transferase, N-terminal domain ATY48_13380 PF00919 Uncharacterized protein family UPF0004 ATY48_13380 PF01938 TRAM domain ATY48_13380 PF04055 Radical SAM superfamily ATY48_13385 PF02562 PhoH-like protein ATY48_13395 PF02130 Uncharacterized protein family UPF0054 ATY48_13405 PF00571 CBS domain ATY48_13405 PF03471 Transporter associated domain ATY48_13410 PF13387 ATY48_13410 ATY48_13415 PF01544 CorA-like Mg2+ transporter protein ATY48_13420 PF00171 Aldehyde dehydrogenase family ATY48_13430 PF00528 Binding-protein-dependent transport system inner membrane component ATY48_13445 PF02321 Outer membrane efflux protein ATY48_13450 PF07690 Major Facilitator Superfamily ATY48_13455 PF13533 Biotin-lipoyl like ATY48_13455 PF16576 ATY48_13455 ATY48_13465 PF00120 Glutamine synthetase, catalytic domain ATY48_13475 PF00120 Glutamine synthetase, catalytic domain ATY48_13480 PF01266 FAD dependent oxidoreductase ATY48_13485 PF00072 Response regulator receiver domain ATY48_13485 PF00990 GGDEF domain ATY48_13490 PF00083 Sugar (and other) transporter ATY48_13490 PF07690 Major Facilitator Superfamily ATY48_13500 PF00384 Molybdopterin oxidoreductase ATY48_13500 PF01568 Molydopterin dinucleotide binding domain ATY48_13505 PF02634 FdhD/NarQ family ATY48_13510 PF07690 Major Facilitator Superfamily ATY48_13520 PF00202 Aminotransferase class-III ATY48_13525 PF13086 AAA domain ATY48_13525 PF13087 AAA domain ATY48_13535 PF04286 ATY48_13535 ATY48_13540 PF00072 Response regulator receiver domain ATY48_13540 PF00512 His Kinase A (phospho-acceptor) domain ATY48_13540 PF01627 Hpt domain ATY48_13540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_13540 PF03924 CHASE domain ATY48_13540 PF08448 PAS fold ATY48_13540 PF13426 PAS domain ATY48_13545 PF00072 Response regulator receiver domain ATY48_13545 PF13487 HD domain ATY48_13550 PF01609 Transposase DDE domain ATY48_13550 PF05598 ATY48_13550 ATY48_13555 PF05088 ATY48_13555 ATY48_13555 PF12466 ATY48_13555 ATY48_13560 PF00440 Bacterial regulatory proteins, tetR family ATY48_13560 PF16859 ATY48_13560 ATY48_13565 PF16576 ATY48_13565 ATY48_13570 PF00873 AcrB/AcrD/AcrF family ATY48_13580 PF12760 Transposase zinc-ribbon domain ATY48_13580 PF12762 ATY48_13580 ATY48_13590 PF00356 Bacterial regulatory proteins, lacI family ATY48_13590 PF13377 Periplasmic binding protein-like domain ATY48_13595 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ATY48_13595 PF00381 PTS HPr component phosphorylation site ATY48_13595 PF00391 PEP-utilising enzyme, mobile domain ATY48_13595 PF02896 PEP-utilising enzyme, TIM barrel domain ATY48_13595 PF05524 PEP-utilising enzyme, N-terminal ATY48_13600 PF00294 pfkB family carbohydrate kinase ATY48_13605 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ATY48_13610 PF04966 Carbohydrate-selective porin, OprB family ATY48_13620 PF01609 Transposase DDE domain ATY48_13620 PF05598 ATY48_13620 ATY48_13625 PF13936 Helix-turn-helix domain ATY48_13655 PF13340 ATY48_13655 ATY48_13660 PF13586 ATY48_13660 ATY48_13680 PF13503 ATY48_13680 ATY48_13685 PF05954 Phage late control gene D protein (GPD) ATY48_13685 PF10106 ATY48_13685 ATY48_13685 PF13296 ATY48_13685 ATY48_13695 PF00665 Integrase core domain ATY48_13695 PF13276 ATY48_13695 ATY48_13705 PF05954 Phage late control gene D protein (GPD) ATY48_13715 PF00665 Integrase core domain ATY48_13715 PF13276 ATY48_13715 ATY48_13720 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY48_13725 PF05954 Phage late control gene D protein (GPD) ATY48_13730 PF13546 ATY48_13730 ATY48_13735 PF06627 Protein of unknown function (DUF1153) ATY48_13740 PF13546 ATY48_13740 ATY48_13745 PF01610 ATY48_13745 ATY48_13745 PF13542 ATY48_13745 ATY48_13755 PF08845 ATY48_13755 ATY48_13770 PF01609 Transposase DDE domain ATY48_13770 PF05598 ATY48_13770 ATY48_13785 PF00593 TonB dependent receptor ATY48_13785 PF07715 TonB-dependent Receptor Plug Domain ATY48_13790 PF04314 Protein of unknown function (DUF461) ATY48_13800 PF00593 TonB dependent receptor ATY48_13800 PF07715 TonB-dependent Receptor Plug Domain ATY48_13810 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ATY48_13810 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ATY48_13815 PF07715 TonB-dependent Receptor Plug Domain ATY48_13820 PF00593 TonB dependent receptor ATY48_13830 PF01618 ATY48_13830 ATY48_13835 PF00691 OmpA family ATY48_13835 PF13677 ATY48_13835 ATY48_13840 PF13614 AAA domain ATY48_13845 PF01584 CheW-like domain ATY48_13850 PF13466 STAS domain ATY48_13855 PF00072 Response regulator receiver domain ATY48_13860 PF01584 CheW-like domain ATY48_13860 PF01627 Hpt domain ATY48_13860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_13860 PF02895 Signal transducing histidine kinase, homodimeric domain ATY48_13870 PF00665 Integrase core domain ATY48_13870 PF13936 Helix-turn-helix domain ATY48_13880 PF13557 ATY48_13880 ATY48_13885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY48_13890 PF12760 Transposase zinc-ribbon domain ATY48_13890 PF12762 ATY48_13890 ATY48_13895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY48_13895 PF00672 HAMP domain ATY48_13895 PF12729 ATY48_13895 ATY48_13900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY48_13900 PF00672 HAMP domain ATY48_13900 PF05227 CHASE3 domain ATY48_13905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY48_13905 PF12729 ATY48_13905 ATY48_13910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY48_13910 PF12729 ATY48_13910 ATY48_13915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY48_13915 PF00672 HAMP domain ATY48_13915 PF12729 ATY48_13915 ATY48_13920 PF07238 PilZ domain ATY48_13920 PF07317 Flagellar regulator YcgR ATY48_13925 PF01584 CheW-like domain ATY48_13930 PF01609 Transposase DDE domain ATY48_13935 PF01609 Transposase DDE domain ATY48_13945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY48_13945 PF00672 HAMP domain ATY48_13945 PF12729 ATY48_13945 ATY48_13950 PF01739 CheR methyltransferase, SAM binding domain ATY48_13950 PF03705 CheR methyltransferase, all-alpha domain ATY48_13955 PF03975 CheD chemotactic sensory transduction ATY48_13960 PF00072 Response regulator receiver domain ATY48_13960 PF01339 CheB methylesterase ATY48_13965 PF00563 EAL domain ATY48_13965 PF00990 GGDEF domain ATY48_13965 PF13185 GAF domain ATY48_13965 PF13426 PAS domain ATY48_13970 PF00561 alpha/beta hydrolase fold ATY48_13975 PF00330 Aconitase family (aconitate hydratase) ATY48_13975 PF06434 Aconitate hydratase 2 N-terminus ATY48_13975 PF11791 Aconitate B N-terminal domain ATY48_13980 PF01850 PIN domain ATY48_13985 PF04014 Antidote-toxin recognition MazE ATY48_13990 PF00330 Aconitase family (aconitate hydratase) ATY48_13990 PF00694 Aconitase C-terminal domain ATY48_14000 PF00501 AMP-binding enzyme ATY48_14000 PF13193 AMP-binding enzyme C-terminal domain ATY48_14005 PF00378 Enoyl-CoA hydratase/isomerase family ATY48_14010 PF00072 Response regulator receiver domain ATY48_14010 PF00512 His Kinase A (phospho-acceptor) domain ATY48_14010 PF01627 Hpt domain ATY48_14010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_14020 PF00072 Response regulator receiver domain ATY48_14020 PF01966 HD domain ATY48_14025 PF00152 tRNA synthetases class II (D, K and N) ATY48_14025 PF01336 OB-fold nucleic acid binding domain ATY48_14030 PF00472 RF-1 domain ATY48_14030 PF03462 PCRF domain ATY48_14035 PF04397 LytTr DNA-binding domain ATY48_14045 PF13542 ATY48_14045 ATY48_14060 PF01368 DHH family ATY48_14060 PF02272 DHHA1 domain ATY48_14070 PF01272 Transcription elongation factor, GreA/GreB, C-term ATY48_14070 PF03449 Transcription elongation factor, N-terminal ATY48_14075 PF02142 MGS-like domain ATY48_14075 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ATY48_14075 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ATY48_14085 PF00117 Glutamine amidotransferase class-I ATY48_14085 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ATY48_14090 PF01113 Dihydrodipicolinate reductase, N-terminus ATY48_14090 PF05173 Dihydrodipicolinate reductase, C-terminus ATY48_14095 PF13586 ATY48_14095 ATY48_14100 PF13340 ATY48_14100 ATY48_14105 PF01610 ATY48_14105 ATY48_14105 PF13542 ATY48_14105 ATY48_14110 PF03473 MOSC domain ATY48_14110 PF03475 3-alpha domain ATY48_14115 PF00155 Aminotransferase class I and II ATY48_14135 PF02421 Ferrous iron transport protein B ATY48_14135 PF07664 ATY48_14135 ATY48_14135 PF07670 Nucleoside recognition ATY48_14140 PF04023 FeoA domain ATY48_14145 PF00378 Enoyl-CoA hydratase/isomerase family ATY48_14150 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ATY48_14155 PF00682 HMGL-like ATY48_14160 PF00106 short chain dehydrogenase ATY48_14165 PF01132 Elongation factor P (EF-P) OB domain ATY48_14165 PF08207 Elongation factor P (EF-P) KOW-like domain ATY48_14165 PF09285 Elongation factor P, C-terminal ATY48_14180 PF13936 Helix-turn-helix domain ATY48_14185 PF00665 Integrase core domain ATY48_14190 PF00083 Sugar (and other) transporter ATY48_14200 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ATY48_14200 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ATY48_14210 PF14498 Glycosyl hydrolase family 65, N-terminal domain ATY48_14215 PF01055 Glycosyl hydrolases family 31 ATY48_14215 PF07691 PA14 domain ATY48_14215 PF16338 ATY48_14215 ATY48_14215 PF17137 ATY48_14215 ATY48_14225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY48_14225 PF03466 LysR substrate binding domain ATY48_14230 PF01081 KDPG and KHG aldolase ATY48_14235 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ATY48_14235 PF13378 Enolase C-terminal domain-like ATY48_14240 PF08450 SMP-30/Gluconolaconase/LRE-like region ATY48_14245 PF05035 2-keto-3-deoxy-galactonokinase ATY48_14250 PF00037 4Fe-4S binding domain ATY48_14250 PF11953 Domain of unknown function (DUF3470) ATY48_14260 PF00701 Dihydrodipicolinate synthetase family ATY48_14265 PF13740 ACT domain ATY48_14270 PF06877 Regulator of ribonuclease activity B ATY48_14275 PF00578 AhpC/TSA family ATY48_14280 PF02562 PhoH-like protein ATY48_14280 PF13638 PIN domain ATY48_14290 PF08543 Phosphomethylpyrimidine kinase ATY48_14315 PF00581 Rhodanese-like domain ATY48_14315 PF09335 ATY48_14315 ATY48_14320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY48_14320 PF03466 LysR substrate binding domain ATY48_14325 PF02678 Pirin ATY48_14345 PF01745 Isopentenyl transferase ATY48_14350 PF03796 DnaB-like helicase C terminal domain ATY48_14360 PF13730 ATY48_14360 ATY48_14370 PF02599 Global regulator protein family ATY48_14375 PF01411 tRNA synthetases class II (A) ATY48_14375 PF02272 DHHA1 domain ATY48_14375 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ATY48_14380 PF02631 RecX family ATY48_14385 PF00154 recA bacterial DNA recombination protein ATY48_14390 PF00717 Peptidase S24-like ATY48_14390 PF01726 LexA DNA binding domain ATY48_14395 PF03109 ATY48_14395 ATY48_14400 PF02464 Competence-damaged protein ATY48_14405 PF01926 50S ribosome-binding GTPase ATY48_14405 PF13167 ATY48_14405 ATY48_14405 PF16360 ATY48_14405 ATY48_14410 PF17209 ATY48_14410 ATY48_14415 PF01715 IPP transferase ATY48_14420 PF00809 Pterin binding enzyme ATY48_14425 PF00004 ATPase family associated with various cellular activities (AAA) ATY48_14425 PF01434 Peptidase family M41 ATY48_14425 PF06480 FtsH Extracellular ATY48_14430 PF01728 FtsJ-like methyltransferase ATY48_14435 PF01985 CRS1 / YhbY (CRM) domain ATY48_14440 PF04430 Protein of unknown function (DUF498/DUF598) ATY48_14445 PF01476 LysM domain ATY48_14445 PF01551 Peptidase family M23 ATY48_14450 PF09335 ATY48_14450 ATY48_14455 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) ATY48_14460 PF01975 Survival protein SurE ATY48_14465 PF01713 Smr domain ATY48_14470 PF01142 tRNA pseudouridine synthase D (TruD) ATY48_14475 PF02542 YgbB family ATY48_14480 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ATY48_14485 PF04977 Septum formation initiator ATY48_14490 PF00113 Enolase, C-terminal TIM barrel domain ATY48_14490 PF03952 Enolase, N-terminal domain ATY48_14500 PF00793 DAHP synthetase I family ATY48_14505 PF00117 Glutamine amidotransferase class-I ATY48_14505 PF06418 CTP synthase N-terminus ATY48_14515 PF00204 DNA gyrase B ATY48_14515 PF00986 DNA gyrase B subunit, carboxyl terminus ATY48_14515 PF01751 Toprim domain ATY48_14515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_14520 PF01609 Transposase DDE domain ATY48_14525 PF13340 ATY48_14525 ATY48_14530 PF00450 Serine carboxypeptidase ATY48_14535 PF02698 DUF218 domain ATY48_14540 PF01384 ATY48_14540 ATY48_14545 PF01865 Protein of unknown function DUF47 ATY48_14550 PF00571 CBS domain ATY48_14550 PF01595 ATY48_14550 ATY48_14550 PF03471 Transporter associated domain ATY48_14560 PF16242 ATY48_14560 ATY48_14565 PF00296 Luciferase-like monooxygenase ATY48_14570 PF00083 Sugar (and other) transporter ATY48_14575 PF00005 ABC transporter ATY48_14585 PF04055 Radical SAM superfamily ATY48_14590 PF14907 Uncharacterised nucleotidyltransferase ATY48_14595 PF13936 Helix-turn-helix domain ATY48_14600 PF00534 Glycosyl transferases group 1 ATY48_14600 PF13579 Glycosyl transferase 4-like domain ATY48_14605 PF00534 Glycosyl transferases group 1 ATY48_14605 PF13439 Glycosyltransferase Family 4 ATY48_14610 PF08241 Methyltransferase domain ATY48_14615 PF01979 Amidohydrolase family ATY48_14620 PF13649 Methyltransferase domain ATY48_14625 PF02706 Chain length determinant protein ATY48_14635 PF00535 Glycosyl transferase family 2 ATY48_14640 PF01943 ATY48_14640 ATY48_14645 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ATY48_14650 PF13480 Acetyltransferase (GNAT) domain ATY48_14660 PF00132 Bacterial transferase hexapeptide (six repeats) ATY48_14665 PF05523 WxcM-like, C-terminal ATY48_14670 PF01292 Prokaryotic cytochrome b561 ATY48_14680 PF00034 Cytochrome c ATY48_14690 PF04542 Sigma-70 region 2 ATY48_14690 PF04545 Sigma-70, region 4 ATY48_14695 PF13490 Putative zinc-finger ATY48_14700 PF00082 Subtilase family ATY48_14705 PF01578 ATY48_14705 ATY48_14710 PF04995 ATY48_14710 ATY48_14715 PF03100 CcmE ATY48_14720 PF01578 ATY48_14720 ATY48_14720 PF16327 ATY48_14720 ATY48_14725 PF08534 Redoxin ATY48_14730 PF03918 Cytochrome C biogenesis protein ATY48_14740 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY48_14770 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY48_14775 PF00873 AcrB/AcrD/AcrF family ATY48_14780 PF05598 ATY48_14780 ATY48_14785 PF00873 AcrB/AcrD/AcrF family ATY48_14790 PF16576 ATY48_14790 ATY48_14810 PF01609 Transposase DDE domain ATY48_14810 PF05598 ATY48_14810 ATY48_14820 PF01527 Transposase ATY48_14825 PF13276 ATY48_14825 ATY48_14835 PF01526 ATY48_14835 ATY48_14840 PF00072 Response regulator receiver domain ATY48_14840 PF00486 Transcriptional regulatory protein, C terminal ATY48_14845 PF00034 Cytochrome c ATY48_14845 PF03150 Di-haem cytochrome c peroxidase ATY48_14850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_14855 PF03466 LysR substrate binding domain ATY48_14860 PF06812 ATY48_14860 ATY48_14865 PF13340 ATY48_14865 ATY48_14870 PF01609 Transposase DDE domain ATY48_14875 PF01609 Transposase DDE domain ATY48_14885 PF00069 Protein kinase domain ATY48_14885 PF03781 Sulfatase-modifying factor enzyme 1 ATY48_14890 PF13672 Protein phosphatase 2C ATY48_14895 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) ATY48_14900 PF06744 ATY48_14900 ATY48_14900 PF06761 ATY48_14900 ATY48_14900 PF14331 ATY48_14900 ATY48_14905 PF00691 OmpA family ATY48_14905 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) ATY48_14910 PF05936 ATY48_14910 ATY48_14915 PF00498 FHA domain ATY48_14925 PF05954 Phage late control gene D protein (GPD) ATY48_14930 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ATY48_14940 PF14441 ATY48_14940 ATY48_14945 PF00004 ATPase family associated with various cellular activities (AAA) ATY48_14945 PF07724 AAA domain (Cdc48 subfamily) ATY48_14945 PF10431 C-terminal, D2-small domain, of ClpB protein ATY48_14950 PF06996 ATY48_14950 ATY48_14955 PF05947 ATY48_14955 ATY48_14960 PF04965 Gene 25-like lysozyme ATY48_14965 PF07024 ImpE protein ATY48_14970 PF05638 Protein of unknown function (DUF796) ATY48_14975 PF05943 ATY48_14975 ATY48_14980 PF05591 ATY48_14980 ATY48_14990 PF01609 Transposase DDE domain ATY48_14990 PF05598 ATY48_14990 ATY48_14995 PF13546 ATY48_14995 ATY48_15000 PF01610 ATY48_15000 ATY48_15000 PF13542 ATY48_15000 ATY48_15005 PF13546 ATY48_15005 ATY48_15010 PF01609 Transposase DDE domain ATY48_15010 PF05598 ATY48_15010 ATY48_15030 PF13683 ATY48_15030 ATY48_15040 PF01106 NifU-like domain ATY48_15045 PF01329 Pterin 4 alpha carbinolamine dehydratase ATY48_15050 PF03544 Gram-negative bacterial TonB protein C-terminal ATY48_15055 PF02535 ATY48_15055 ATY48_15065 PF11737 ATY48_15065 ATY48_15070 PF00849 RNA pseudouridylate synthase ATY48_15070 PF01479 S4 domain ATY48_15075 PF00575 S1 RNA binding domain ATY48_15075 PF10150 Ribonuclease E/G family ATY48_15080 PF13586 ATY48_15080 ATY48_15085 PF13340 ATY48_15085 ATY48_15090 PF00072 Response regulator receiver domain ATY48_15090 PF00196 Bacterial regulatory proteins, luxR family ATY48_15095 PF00581 Rhodanese-like domain ATY48_15100 PF01609 Transposase DDE domain ATY48_15100 PF05598 ATY48_15100 ATY48_15110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATY48_15115 PF03486 HI0933-like protein ATY48_15120 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ATY48_15120 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ATY48_15120 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ATY48_15130 PF01648 4'-phosphopantetheinyl transferase superfamily ATY48_15140 PF01610 ATY48_15140 ATY48_15140 PF13542 ATY48_15140 ATY48_15145 PF13546 ATY48_15145 ATY48_15150 PF10685 ATY48_15150 ATY48_15160 PF01609 Transposase DDE domain ATY48_15160 PF05598 ATY48_15160 ATY48_15165 PF13546 ATY48_15165 ATY48_15170 PF12760 Transposase zinc-ribbon domain ATY48_15170 PF12762 ATY48_15170 ATY48_15180 PF12760 Transposase zinc-ribbon domain ATY48_15180 PF12762 ATY48_15180 ATY48_15185 PF13379 NMT1-like family ATY48_15190 PF03861 ANTAR domain ATY48_15195 PF00072 Response regulator receiver domain ATY48_15200 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ATY48_15200 PF10414 Sirohaem synthase dimerisation region ATY48_15200 PF13241 Putative NAD(P)-binding ATY48_15200 PF14824 Sirohaem biosynthesis protein central ATY48_15230 PF01609 Transposase DDE domain ATY48_15230 PF05598 ATY48_15230 ATY48_15240 PF12760 Transposase zinc-ribbon domain ATY48_15240 PF12762 ATY48_15240 ATY48_15250 PF12760 Transposase zinc-ribbon domain ATY48_15250 PF12762 ATY48_15250 ATY48_15255 PF13379 NMT1-like family ATY48_15260 PF03861 ANTAR domain ATY48_15265 PF00072 Response regulator receiver domain ATY48_15270 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ATY48_15270 PF10414 Sirohaem synthase dimerisation region ATY48_15270 PF13241 Putative NAD(P)-binding ATY48_15270 PF14824 Sirohaem biosynthesis protein central ATY48_15285 PF12625 ATY48_15285 ATY48_15295 PF12804 MobA-like NTP transferase domain ATY48_15300 PF00994 Probable molybdopterin binding domain ATY48_15300 PF03453 MoeA N-terminal region (domain I and II) ATY48_15300 PF03454 MoeA C-terminal region (domain IV) ATY48_15320 PF01610 ATY48_15320 ATY48_15320 PF13542 ATY48_15320 ATY48_15330 PF13340 ATY48_15330 ATY48_15335 PF13358 DDE superfamily endonuclease ATY48_15335 PF13551 Winged helix-turn helix ATY48_15335 PF13592 ATY48_15335 ATY48_15340 PF01609 Transposase DDE domain ATY48_15345 PF07944 Putative glycosyl hydrolase of unknown function (DUF1680) ATY48_15360 PF07715 TonB-dependent Receptor Plug Domain ATY48_15365 PF07715 TonB-dependent Receptor Plug Domain ATY48_15375 PF00326 Prolyl oligopeptidase family ATY48_15375 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ATY48_15380 PF04616 Glycosyl hydrolases family 43 ATY48_15385 PF00754 F5/8 type C domain ATY48_15385 PF07532 ATY48_15385 ATY48_15390 PF00593 TonB dependent receptor ATY48_15390 PF07715 TonB-dependent Receptor Plug Domain ATY48_15400 PF00082 Subtilase family ATY48_15400 PF09286 Pro-kumamolisin, activation domain ATY48_15430 PF00326 Prolyl oligopeptidase family ATY48_15430 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ATY48_15435 PF13520 Amino acid permease ATY48_15440 PF05960 Bacterial protein of unknown function (DUF885) ATY48_15445 PF05960 Bacterial protein of unknown function (DUF885) ATY48_15450 PF00557 Metallopeptidase family M24 ATY48_15450 PF01321 Creatinase/Prolidase N-terminal domain ATY48_15455 PF00171 Aldehyde dehydrogenase family ATY48_15460 PF00701 Dihydrodipicolinate synthetase family ATY48_15465 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY48_15470 PF13510 2Fe-2S iron-sulfur cluster binding domain ATY48_15475 PF01266 FAD dependent oxidoreductase ATY48_15480 PF05544 Proline racemase ATY48_15485 PF08448 PAS fold ATY48_15485 PF12833 Helix-turn-helix domain ATY48_15490 PF00448 SRP54-type protein, GTPase domain ATY48_15490 PF02881 SRP54-type protein, helical bundle domain ATY48_15500 PF00633 Helix-hairpin-helix motif ATY48_15500 PF00730 HhH-GPD superfamily base excision DNA repair protein ATY48_15500 PF14815 NUDIX domain ATY48_15505 PF04362 Bacterial Fe(2+) trafficking ATY48_15510 PF00072 Response regulator receiver domain ATY48_15510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_15510 PF13426 PAS domain ATY48_15520 PF05598 ATY48_15520 ATY48_15525 PF01609 Transposase DDE domain ATY48_15530 PF10294 Putative methyltransferase ATY48_15540 PF12760 Transposase zinc-ribbon domain ATY48_15540 PF12762 ATY48_15540 ATY48_15560 PF08843 Nucleotidyl transferase of unknown function (DUF1814) ATY48_15565 PF13338 ATY48_15565 ATY48_15575 PF04703 FaeA-like protein ATY48_15585 PF13358 DDE superfamily endonuclease ATY48_15585 PF13551 Winged helix-turn helix ATY48_15585 PF13592 ATY48_15585 ATY48_15605 PF13358 DDE superfamily endonuclease ATY48_15605 PF13518 Helix-turn-helix domain ATY48_15610 PF01963 ATY48_15610 ATY48_15615 PF06172 Cupin superfamily (DUF985) ATY48_15620 PF03808 ATY48_15620 ATY48_15625 PF04230 ATY48_15625 ATY48_15635 PF13440 ATY48_15635 ATY48_15640 PF13692 Glycosyl transferases group 1 ATY48_15645 PF00534 Glycosyl transferases group 1 ATY48_15645 PF13439 Glycosyltransferase Family 4 ATY48_15650 PF01757 ATY48_15650 ATY48_15655 PF01757 ATY48_15655 ATY48_15665 PF02397 ATY48_15665 ATY48_15665 PF13727 CoA-binding domain ATY48_15670 PF02706 Chain length determinant protein ATY48_15670 PF13807 ATY48_15670 ATY48_15675 PF02563 Polysaccharide biosynthesis/export protein ATY48_15675 PF10531 SLBB domain ATY48_15685 PF13411 MerR HTH family regulatory protein ATY48_15690 PF00216 Bacterial DNA-binding protein ATY48_15695 PF01588 Putative tRNA binding domain ATY48_15695 PF03147 Ferredoxin-fold anticodon binding domain ATY48_15695 PF03483 B3/4 domain ATY48_15695 PF03484 tRNA synthetase B5 domain ATY48_15700 PF01409 tRNA synthetases class II core domain (F) ATY48_15700 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ATY48_15705 PF00453 Ribosomal protein L20 ATY48_15710 PF01632 Ribosomal protein L35 ATY48_15715 PF00707 Translation initiation factor IF-3, C-terminal domain ATY48_15715 PF05198 Translation initiation factor IF-3, N-terminal domain ATY48_15720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ATY48_15720 PF02824 TGS domain ATY48_15720 PF03129 Anticodon binding domain ATY48_15720 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ATY48_15725 PF13683 ATY48_15725 ATY48_15730 PF01527 Transposase ATY48_15750 PF00271 Helicase conserved C-terminal domain ATY48_15750 PF02151 UvrB/uvrC motif ATY48_15750 PF04851 Type III restriction enzyme, res subunit ATY48_15750 PF12344 Ultra-violet resistance protein B ATY48_15755 PF12019 Type II transport protein GspH ATY48_15765 PF16732 ATY48_15765 ATY48_15770 PF05567 Neisseria PilC beta-propeller domain ATY48_15775 PF14341 ATY48_15775 ATY48_15780 PF07963 Prokaryotic N-terminal methylation motif ATY48_15780 PF16074 ATY48_15780 ATY48_15785 PF07963 Prokaryotic N-terminal methylation motif ATY48_15790 PF07963 Prokaryotic N-terminal methylation motif ATY48_15790 PF12019 Type II transport protein GspH ATY48_15795 PF03641 Possible lysine decarboxylase ATY48_15795 PF11892 Domain of unknown function (DUF3412) ATY48_15795 PF14793 Domain of unknown function (DUF4478) ATY48_15800 PF07715 TonB-dependent Receptor Plug Domain ATY48_15800 PF13620 Carboxypeptidase regulatory-like domain ATY48_15805 PF01914 ATY48_15805 ATY48_15810 PF00106 short chain dehydrogenase ATY48_15815 PF00462 Glutaredoxin ATY48_15820 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ATY48_15820 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ATY48_15825 PF02222 ATP-grasp domain ATY48_15830 PF00731 AIR carboxylase ATY48_15835 PF03966 Trm112p-like protein ATY48_15840 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ATY48_15840 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ATY48_15845 PF10030 ATY48_15845 ATY48_15850 PF00013 KH domain ATY48_15850 PF00575 S1 RNA binding domain ATY48_15850 PF01138 3' exoribonuclease family, domain 1 ATY48_15850 PF03725 3' exoribonuclease family, domain 2 ATY48_15850 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ATY48_15855 PF00312 Ribosomal protein S15 ATY48_15860 PF01509 TruB family pseudouridylate synthase (N terminal domain) ATY48_15860 PF09157 Pseudouridine synthase II TruB, C-terminal ATY48_15860 PF16198 ATY48_15860 ATY48_15865 PF02033 Ribosome-binding factor A ATY48_15870 PF00009 Elongation factor Tu GTP binding domain ATY48_15870 PF04760 Translation initiation factor IF-2, N-terminal region ATY48_15870 PF08364 ATY48_15870 ATY48_15870 PF11987 Translation-initiation factor 2 ATY48_15875 PF00575 S1 RNA binding domain ATY48_15875 PF08529 NusA N-terminal domain ATY48_15875 PF13184 NusA-like KH domain ATY48_15875 PF14520 Helix-hairpin-helix domain ATY48_15880 PF02576 Uncharacterised BCR, YhbC family COG0779 ATY48_15880 PF17384 ATY48_15880 ATY48_15890 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains ATY48_15895 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains ATY48_15900 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains ATY48_15900 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ATY48_15905 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ATY48_15910 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ATY48_15915 PF12838 4Fe-4S dicluster domain ATY48_15920 PF00146 NADH dehydrogenase ATY48_15925 PF00384 Molybdopterin oxidoreductase ATY48_15925 PF01568 Molydopterin dinucleotide binding domain ATY48_15925 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ATY48_15925 PF13510 2Fe-2S iron-sulfur cluster binding domain ATY48_15930 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ATY48_15930 PF10531 SLBB domain ATY48_15930 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ATY48_15935 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin ATY48_15940 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ATY48_15945 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ATY48_15950 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ATY48_15955 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ATY48_15965 PF03840 Preprotein translocase SecG subunit ATY48_15970 PF00121 Triosephosphate isomerase ATY48_15975 PF00106 short chain dehydrogenase ATY48_15980 PF01152 Bacterial-like globin ATY48_15985 PF13586 ATY48_15985 ATY48_15990 PF13340 ATY48_15990 ATY48_16005 PF00563 EAL domain ATY48_16005 PF00672 HAMP domain ATY48_16005 PF00990 GGDEF domain ATY48_16005 PF14827 Sensory domain of two-component sensor kinase ATY48_16015 PF03171 2OG-Fe(II) oxygenase superfamily ATY48_16015 PF14226 non-haem dioxygenase in morphine synthesis N-terminal ATY48_16020 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ATY48_16020 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ATY48_16020 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ATY48_16020 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ATY48_16025 PF01039 Carboxyl transferase domain ATY48_16030 PF00290 Tryptophan synthase alpha chain ATY48_16040 PF00291 Pyridoxal-phosphate dependent enzyme ATY48_16045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY48_16045 PF03466 LysR substrate binding domain ATY48_16050 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ATY48_16055 PF01416 tRNA pseudouridine synthase ATY48_16070 PF01118 Semialdehyde dehydrogenase, NAD binding domain ATY48_16070 PF02774 Semialdehyde dehydrogenase, dimerisation domain ATY48_16075 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ATY48_16075 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATY48_16080 PF01264 Chorismate synthase ATY48_16085 PF05175 Methyltransferase small domain ATY48_16090 PF02630 SCO1/SenC ATY48_16095 PF02666 ATY48_16095 ATY48_16100 PF01464 Transglycosylase SLT domain ATY48_16100 PF01476 LysM domain ATY48_16105 PF05872 ATY48_16105 ATY48_16110 PF13936 Helix-turn-helix domain ATY48_16115 PF01694 Rhomboid family ATY48_16125 PF01272 Transcription elongation factor, GreA/GreB, C-term ATY48_16125 PF03449 Transcription elongation factor, N-terminal ATY48_16130 PF00919 Uncharacterized protein family UPF0004 ATY48_16130 PF04055 Radical SAM superfamily ATY48_16135 PF01738 Dienelactone hydrolase family ATY48_16140 PF01230 HIT domain ATY48_16150 PF00692 dUTPase ATY48_16155 PF10609 ParA/MinD ATPase like ATY48_16165 PF01431 Peptidase family M13 ATY48_16165 PF05649 Peptidase family M13 ATY48_16170 PF01694 Rhomboid family ATY48_16175 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ATY48_16180 PF12760 Transposase zinc-ribbon domain ATY48_16180 PF12762 ATY48_16180 ATY48_16190 PF01266 FAD dependent oxidoreductase ATY48_16195 PF04235 ATY48_16195 ATY48_16200 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATY48_16205 PF00877 NlpC/P60 family ATY48_16210 PF00877 NlpC/P60 family ATY48_16215 PF03061 Thioesterase superfamily ATY48_16225 PF00375 Sodium:dicarboxylate symporter family ATY48_16230 PF00245 Alkaline phosphatase ATY48_16235 PF01171 PP-loop family ATY48_16235 PF09179 TilS substrate binding domain ATY48_16235 PF11734 TilS substrate C-terminal domain ATY48_16240 PF02609 Exonuclease VII small subunit ATY48_16245 PF00348 Polyprenyl synthetase ATY48_16255 PF09685 ATY48_16255 ATY48_16265 PF01523 Putative modulator of DNA gyrase ATY48_16270 PF04751 Protein of unknown function (DUF615) ATY48_16275 PF01523 Putative modulator of DNA gyrase ATY48_16285 PF13116 ATY48_16285 ATY48_16285 PF13502 ATY48_16285 ATY48_16290 PF00575 S1 RNA binding domain ATY48_16290 PF10150 Ribonuclease E/G family ATY48_16295 PF02545 Maf-like protein ATY48_16300 PF04402 Protein of unknown function (DUF541) ATY48_16305 PF00593 TonB dependent receptor ATY48_16305 PF07715 TonB-dependent Receptor Plug Domain ATY48_16305 PF13620 Carboxypeptidase regulatory-like domain ATY48_16315 PF02590 Predicted SPOUT methyltransferase ATY48_16325 PF05787 Bacterial protein of unknown function (DUF839) ATY48_16335 PF02410 Oligomerisation domain ATY48_16340 PF01467 Cytidylyltransferase ATY48_16345 PF06144 DNA polymerase III, delta subunit ATY48_16350 PF04390 Lipopolysaccharide-assembly ATY48_16355 PF00133 tRNA synthetases class I (I, L, M and V) ATY48_16355 PF08264 Anticodon-binding domain of tRNA ATY48_16355 PF13603 Leucyl-tRNA synthetase, Domain 2 ATY48_16360 PF06197 ATY48_16360 ATY48_16365 PF00085 Thioredoxin ATY48_16365 PF14559 Tetratricopeptide repeat ATY48_16365 PF14561 Tetratricopeptide repeat ATY48_16370 PF14539 Domain of unknown function (DUF4442) ATY48_16375 PF01609 Transposase DDE domain ATY48_16375 PF05598 ATY48_16375 ATY48_16380 PF12760 Transposase zinc-ribbon domain ATY48_16380 PF12762 ATY48_16380 ATY48_16385 PF13340 ATY48_16385 ATY48_16390 PF13586 ATY48_16390 ATY48_16405 PF04070 ATY48_16405 ATY48_16410 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ATY48_16420 PF13546 ATY48_16420 ATY48_16425 PF01609 Transposase DDE domain ATY48_16430 PF12760 Transposase zinc-ribbon domain ATY48_16430 PF12762 ATY48_16430 ATY48_16435 PF13340 ATY48_16435 ATY48_16440 PF13586 ATY48_16440 ATY48_16445 PF00128 Alpha amylase, catalytic domain ATY48_16445 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ATY48_16455 PF01609 Transposase DDE domain ATY48_16455 PF05598 ATY48_16455 ATY48_16460 PF12760 Transposase zinc-ribbon domain ATY48_16465 PF12762 ATY48_16465 ATY48_16470 PF13936 Helix-turn-helix domain ATY48_16475 PF13586 ATY48_16475 ATY48_16480 PF13340 ATY48_16480 ATY48_16485 PF00665 Integrase core domain ATY48_16490 PF01609 Transposase DDE domain ATY48_16495 PF00816 H-NS histone family ATY48_16505 PF01609 Transposase DDE domain ATY48_16510 PF00665 Integrase core domain ATY48_16510 PF13276 ATY48_16510 ATY48_16515 PF00589 Phage integrase family ATY48_16520 PF12760 Transposase zinc-ribbon domain ATY48_16525 PF12762 ATY48_16525 ATY48_16535 PF00657 GDSL-like Lipase/Acylhydrolase ATY48_16535 PF03797 Autotransporter beta-domain ATY48_16540 PF02597 ThiS family ATY48_16545 PF05690 Thiazole biosynthesis protein ThiG ATY48_16550 PF02390 Putative methyltransferase ATY48_16555 PF02080 TrkA-C domain ATY48_16555 PF03600 Citrate transporter ATY48_16560 PF00355 Rieske [2Fe-2S] domain ATY48_16575 PF01609 Transposase DDE domain ATY48_16580 PF13936 Helix-turn-helix domain ATY48_16585 PF00665 Integrase core domain ATY48_16590 PF01557 Fumarylacetoacetate (FAA) hydrolase family ATY48_16595 PF01741 Large-conductance mechanosensitive channel, MscL ATY48_16600 PF13586 ATY48_16600 ATY48_16605 PF13340 ATY48_16605 ATY48_16610 PF12760 Transposase zinc-ribbon domain ATY48_16610 PF12762 ATY48_16610 ATY48_16615 PF00135 Carboxylesterase family ATY48_16620 PF00588 SpoU rRNA Methylase family ATY48_16620 PF08032 RNA 2'-O ribose methyltransferase substrate binding ATY48_16640 PF12760 Transposase zinc-ribbon domain ATY48_16640 PF12762 ATY48_16640 ATY48_16650 PF01433 Peptidase family M1 ATY48_16650 PF11838 ERAP1-like C-terminal domain ATY48_16655 PF00873 AcrB/AcrD/AcrF family ATY48_16660 PF16576 ATY48_16660 ATY48_16665 PF00009 Elongation factor Tu GTP binding domain ATY48_16665 PF01583 Adenylylsulphate kinase ATY48_16670 PF01507 Phosphoadenosine phosphosulfate reductase family ATY48_16675 PF00175 Oxidoreductase NAD-binding domain ATY48_16675 PF00258 Flavodoxin ATY48_16675 PF00667 FAD binding domain ATY48_16680 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ATY48_16680 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ATY48_16685 PF01507 Phosphoadenosine phosphosulfate reductase family ATY48_16690 PF03929 ATY48_16690 ATY48_16695 PF00593 TonB dependent receptor ATY48_16695 PF07715 TonB-dependent Receptor Plug Domain ATY48_16700 PF11162 ATY48_16700 ATY48_16705 PF01590 GAF domain ATY48_16705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_16715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY48_16715 PF03466 LysR substrate binding domain ATY48_16720 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ATY48_16725 PF00291 Pyridoxal-phosphate dependent enzyme ATY48_16735 PF04191 Phospholipid methyltransferase ATY48_16740 PF01661 Macro domain ATY48_16745 PF00274 Fructose-bisphosphate aldolase class-I ATY48_16750 PF00224 Pyruvate kinase, barrel domain ATY48_16750 PF02887 Pyruvate kinase, alpha/beta domain ATY48_16755 PF13419 Haloacid dehalogenase-like hydrolase ATY48_16760 PF00162 Phosphoglycerate kinase ATY48_16765 PF13163 ATY48_16765 ATY48_16770 PF10101 ATY48_16770 ATY48_16790 PF00199 Catalase ATY48_16790 PF06628 Catalase-related immune-responsive ATY48_16805 PF01609 Transposase DDE domain ATY48_16805 PF05598 ATY48_16805 ATY48_16810 PF12760 Transposase zinc-ribbon domain ATY48_16810 PF12762 ATY48_16810 ATY48_16815 PF13358 DDE superfamily endonuclease ATY48_16815 PF13551 Winged helix-turn helix ATY48_16815 PF13592 ATY48_16815 ATY48_16825 PF08448 PAS fold ATY48_16825 PF12833 Helix-turn-helix domain ATY48_16845 PF05598 ATY48_16845 ATY48_16850 PF01610 ATY48_16850 ATY48_16850 PF13542 ATY48_16850 ATY48_16860 PF00326 Prolyl oligopeptidase family ATY48_16860 PF07676 WD40-like Beta Propeller Repeat ATY48_16865 PF13557 ATY48_16865 ATY48_16880 PF01609 Transposase DDE domain ATY48_16880 PF05598 ATY48_16880 ATY48_16885 PF03169 ATY48_16885 ATY48_16890 PF13365 Trypsin-like peptidase domain ATY48_16895 PF08668 HDOD domain ATY48_16900 PF02811 PHP domain ATY48_16900 PF07733 Bacterial DNA polymerase III alpha subunit ATY48_16900 PF14579 Helix-hairpin-helix motif ATY48_16905 PF00817 impB/mucB/samB family ATY48_16915 PF00717 Peptidase S24-like ATY48_16915 PF01726 LexA DNA binding domain ATY48_16920 PF04014 Antidote-toxin recognition MazE ATY48_16925 PF02661 Fic/DOC family ATY48_16935 PF01609 Transposase DDE domain ATY48_16945 PF00300 Histidine phosphatase superfamily (branch 1) ATY48_16950 PF00440 Bacterial regulatory proteins, tetR family ATY48_16975 PF00069 Protein kinase domain ATY48_16985 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ATY48_16985 PF04851 Type III restriction enzyme, res subunit ATY48_16985 PF11867 ATY48_16985 ATY48_16995 PF14355 ATY48_16995 ATY48_17005 PF01609 Transposase DDE domain ATY48_17005 PF05598 ATY48_17005 ATY48_17015 PF08780 Nucleotidyltransferase substrate binding protein like ATY48_17020 PF02384 N-6 DNA Methylase ATY48_17020 PF12161 HsdM N-terminal domain ATY48_17025 PF04471 Restriction endonuclease ATY48_17030 PF05016 Plasmid stabilisation system protein ATY48_17040 PF00271 Helicase conserved C-terminal domain ATY48_17040 PF04851 Type III restriction enzyme, res subunit ATY48_17040 PF08463 ATY48_17040 ATY48_17040 PF13643 ATY48_17040 ATY48_17045 PF07751 ATY48_17045 ATY48_17050 PF02384 N-6 DNA Methylase ATY48_17050 PF12161 HsdM N-terminal domain ATY48_17055 PF01420 Type I restriction modification DNA specificity domain ATY48_17060 PF05016 Plasmid stabilisation system protein ATY48_17070 PF05954 Phage late control gene D protein (GPD) ATY48_17115 PF13503 ATY48_17115 ATY48_17120 PF05954 Phage late control gene D protein (GPD) ATY48_17120 PF10106 ATY48_17120 ATY48_17120 PF13296 ATY48_17120 ATY48_17130 PF00004 ATPase family associated with various cellular activities (AAA) ATY48_17130 PF02861 Clp amino terminal domain ATY48_17130 PF07724 AAA domain (Cdc48 subfamily) ATY48_17130 PF10431 C-terminal, D2-small domain, of ClpB protein ATY48_17135 PF06996 ATY48_17135 ATY48_17140 PF05947 ATY48_17140 ATY48_17145 PF04965 Gene 25-like lysozyme ATY48_17150 PF05638 Protein of unknown function (DUF796) ATY48_17155 PF05943 ATY48_17155 ATY48_17160 PF05591 ATY48_17160 ATY48_17170 PF12790 Type VI secretion lipoprotein ATY48_17175 PF05936 ATY48_17175 ATY48_17180 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) ATY48_17185 PF05954 Phage late control gene D protein (GPD) ATY48_17185 PF10106 ATY48_17185 ATY48_17185 PF13296 ATY48_17185 ATY48_17190 PF05954 Phage late control gene D protein (GPD) ATY48_17210 PF01609 Transposase DDE domain ATY48_17215 PF15584 ATY48_17215 ATY48_17225 PF15584 ATY48_17225 ATY48_17225 PF15602 ATY48_17225 ATY48_17235 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) ATY48_17240 PF05954 Phage late control gene D protein (GPD) ATY48_17240 PF10106 ATY48_17240 ATY48_17240 PF13296 ATY48_17240 ATY48_17245 PF10106 ATY48_17245 ATY48_17250 PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) ATY48_17255 PF11745 ATY48_17255 ATY48_17260 PF13503 ATY48_17260 ATY48_17270 PF03781 Sulfatase-modifying factor enzyme 1 ATY48_17280 PF03781 Sulfatase-modifying factor enzyme 1 ATY48_17290 PF05954 Phage late control gene D protein (GPD) ATY48_17290 PF10106 ATY48_17290 ATY48_17290 PF13296 ATY48_17290 ATY48_17300 PF06812 ATY48_17300 ATY48_17305 PF00691 OmpA family ATY48_17310 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) ATY48_17315 PF06744 ATY48_17315 ATY48_17315 PF06761 ATY48_17315 ATY48_17315 PF14331 ATY48_17315 ATY48_17325 PF05488 PAAR motif ATY48_17330 PF13539 D-alanyl-D-alanine carboxypeptidase ATY48_17340 PF01527 Transposase ATY48_17340 PF13359 ATY48_17340 ATY48_17345 PF01609 Transposase DDE domain ATY48_17345 PF05598 ATY48_17345 ATY48_17350 PF02222 ATP-grasp domain ATY48_17365 PF03869 Arc-like DNA binding domain ATY48_17370 PF02557 D-alanyl-D-alanine carboxypeptidase ATY48_17375 PF00730 HhH-GPD superfamily base excision DNA repair protein ATY48_17380 PF04241 ATY48_17380 ATY48_17385 PF10604 Polyketide cyclase / dehydrase and lipid transport ATY48_17390 PF00072 Response regulator receiver domain ATY48_17390 PF00196 Bacterial regulatory proteins, luxR family ATY48_17395 PF07730 Histidine kinase ATY48_17400 PF00583 Acetyltransferase (GNAT) family ATY48_17405 PF03775 Septum formation inhibitor MinC, C-terminal domain ATY48_17405 PF05209 Septum formation inhibitor MinC, N-terminal domain ATY48_17410 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ATY48_17415 PF03776 Septum formation topological specificity factor MinE ATY48_17425 PF00512 His Kinase A (phospho-acceptor) domain ATY48_17425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_17430 PF00072 Response regulator receiver domain ATY48_17430 PF00486 Transcriptional regulatory protein, C terminal ATY48_17435 PF13231 ATY48_17435 ATY48_17440 PF01569 PAP2 superfamily ATY48_17445 PF00884 Sulfatase ATY48_17445 PF08019 ATY48_17445 ATY48_17450 PF01401 Angiotensin-converting enzyme ATY48_17465 PF00005 ABC transporter ATY48_17465 PF00664 ABC transporter transmembrane region ATY48_17465 PF03412 Peptidase C39 family ATY48_17475 PF13469 Sulfotransferase family ATY48_17485 PF02347 Glycine cleavage system P-protein ATY48_17495 PF08774 VRR-NUC domain ATY48_17500 PF11876 ATY48_17500 ATY48_17505 PF11876 ATY48_17505 ATY48_17520 PF01527 Transposase ATY48_17525 PF13936 Helix-turn-helix domain ATY48_17530 PF13340 ATY48_17530 ATY48_17535 PF13586 ATY48_17535 ATY48_17540 PF13358 DDE superfamily endonuclease ATY48_17540 PF13551 Winged helix-turn helix ATY48_17540 PF13592 ATY48_17540 ATY48_17545 PF01196 Ribosomal protein L17 ATY48_17550 PF01000 RNA polymerase Rpb3/RpoA insert domain ATY48_17550 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ATY48_17550 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ATY48_17555 PF00163 Ribosomal protein S4/S9 N-terminal domain ATY48_17555 PF01479 S4 domain ATY48_17560 PF00411 Ribosomal protein S11 ATY48_17565 PF00416 Ribosomal protein S13/S18 ATY48_17570 PF00344 SecY translocase ATY48_17575 PF00828 Ribosomal protein L18e/L15 ATY48_17580 PF00327 Ribosomal protein L30p/L7e ATY48_17585 PF00333 Ribosomal protein S5, N-terminal domain ATY48_17585 PF03719 Ribosomal protein S5, C-terminal domain ATY48_17590 PF00861 Ribosomal L18p/L5e family ATY48_17595 PF00347 Ribosomal protein L6 ATY48_17600 PF00410 Ribosomal protein S8 ATY48_17605 PF00253 Ribosomal protein S14p/S29e ATY48_17610 PF00281 Ribosomal protein L5 ATY48_17610 PF00673 ribosomal L5P family C-terminus ATY48_17615 PF00467 KOW motif ATY48_17615 PF17136 ATY48_17615 ATY48_17620 PF00238 Ribosomal protein L14p/L23e ATY48_17625 PF00366 Ribosomal protein S17 ATY48_17630 PF00831 Ribosomal L29 protein ATY48_17635 PF00252 Ribosomal protein L16p/L10e ATY48_17640 PF00189 Ribosomal protein S3, C-terminal domain ATY48_17640 PF07650 KH domain ATY48_17645 PF00237 Ribosomal protein L22p/L17e ATY48_17650 PF00203 Ribosomal protein S19 ATY48_17655 PF00181 Ribosomal Proteins L2, RNA binding domain ATY48_17655 PF03947 Ribosomal Proteins L2, C-terminal domain ATY48_17660 PF00276 Ribosomal protein L23 ATY48_17665 PF00573 Ribosomal protein L4/L1 family ATY48_17670 PF00297 Ribosomal protein L3 ATY48_17675 PF00338 Ribosomal protein S10p/S20e ATY48_17685 PF00009 Elongation factor Tu GTP binding domain ATY48_17685 PF03143 Elongation factor Tu C-terminal domain ATY48_17685 PF03144 Elongation factor Tu domain 2 ATY48_17690 PF00009 Elongation factor Tu GTP binding domain ATY48_17690 PF00679 Elongation factor G C-terminus ATY48_17690 PF03144 Elongation factor Tu domain 2 ATY48_17690 PF03764 Elongation factor G, domain IV ATY48_17690 PF14492 Elongation Factor G, domain II ATY48_17695 PF00177 Ribosomal protein S7p/S5e ATY48_17700 PF00164 Ribosomal protein S12/S23 ATY48_17705 PF00623 RNA polymerase Rpb1, domain 2 ATY48_17705 PF04983 RNA polymerase Rpb1, domain 3 ATY48_17705 PF04997 RNA polymerase Rpb1, domain 1 ATY48_17705 PF04998 RNA polymerase Rpb1, domain 5 ATY48_17705 PF05000 RNA polymerase Rpb1, domain 4 ATY48_17710 PF00562 RNA polymerase Rpb2, domain 6 ATY48_17710 PF04560 RNA polymerase Rpb2, domain 7 ATY48_17710 PF04561 RNA polymerase Rpb2, domain 2 ATY48_17710 PF04563 RNA polymerase beta subunit ATY48_17710 PF04565 RNA polymerase Rpb2, domain 3 ATY48_17710 PF10385 RNA polymerase beta subunit external 1 domain ATY48_17715 PF00542 Ribosomal protein L7/L12 C-terminal domain ATY48_17715 PF16320 ATY48_17715 ATY48_17720 PF00466 Ribosomal protein L10 ATY48_17725 PF00687 Ribosomal protein L1p/L10e family ATY48_17730 PF00298 Ribosomal protein L11, RNA binding domain ATY48_17730 PF03946 Ribosomal protein L11, N-terminal domain ATY48_17735 PF00467 KOW motif ATY48_17735 PF02357 Transcription termination factor nusG ATY48_17740 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ATY48_17750 PF00009 Elongation factor Tu GTP binding domain ATY48_17750 PF03143 Elongation factor Tu C-terminal domain ATY48_17750 PF03144 Elongation factor Tu domain 2 ATY48_17770 PF01926 50S ribosome-binding GTPase ATY48_17770 PF06071 Protein of unknown function (DUF933) ATY48_17775 PF01195 Peptidyl-tRNA hydrolase ATY48_17780 PF01386 Ribosomal L25p family ATY48_17780 PF14693 Ribosomal protein TL5, C-terminal domain ATY48_17785 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ATY48_17785 PF14572 Phosphoribosyl synthetase-associated domain ATY48_17795 PF00288 GHMP kinases N terminal domain ATY48_17795 PF08544 GHMP kinases C terminal ATY48_17800 PF03550 Outer membrane lipoprotein LolB ATY48_17805 PF13429 Tetratricopeptide repeat ATY48_17810 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ATY48_17810 PF01488 Shikimate / quinate 5-dehydrogenase ATY48_17810 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ATY48_17815 PF00472 RF-1 domain ATY48_17815 PF03462 PCRF domain ATY48_17820 PF13844 Glycosyl transferase family 41 ATY48_17820 PF14559 Tetratricopeptide repeat ATY48_17825 PF00994 Probable molybdopterin binding domain ATY48_17830 PF03976 Polyphosphate kinase 2 (PPK2) ATY48_17840 PF00708 Acylphosphatase ATY48_17845 PF00578 AhpC/TSA family ATY48_17850 PF03631 ATY48_17850 ATY48_17855 PF03358 NADPH-dependent FMN reductase ATY48_17860 PF09842 ATY48_17860 ATY48_17865 PF02055 O-Glycosyl hydrolase family 30 ATY48_17865 PF17189 ATY48_17865 ATY48_17870 PF00710 Asparaginase ATY48_17875 PF04073 Aminoacyl-tRNA editing domain ATY48_17885 PF01063 Aminotransferase class IV ATY48_17890 PF01883 Domain of unknown function DUF59 ATY48_17905 PF13340 ATY48_17905 ATY48_17910 PF01609 Transposase DDE domain ATY48_17915 PF02233 NAD(P) transhydrogenase beta subunit ATY48_17920 PF12769 Domain of unknown function (DUF3814) ATY48_17925 PF04542 Sigma-70 region 2 ATY48_17925 PF08281 Sigma-70, region 4 ATY48_17935 PF11304 ATY48_17935 ATY48_17940 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ATY48_17940 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ATY48_17945 PF07793 ATY48_17945 ATY48_17950 PF00881 Nitroreductase family ATY48_17955 PF01367 5'-3' exonuclease, C-terminal SAM fold ATY48_17955 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ATY48_17960 PF00293 NUDIX domain ATY48_17965 PF05013 N-formylglutamate amidohydrolase ATY48_17970 PF00561 alpha/beta hydrolase fold ATY48_17995 PF00665 Integrase core domain ATY48_17995 PF13936 Helix-turn-helix domain ATY48_18000 PF05175 Methyltransferase small domain ATY48_18005 PF00578 AhpC/TSA family ATY48_18005 PF10417 C-terminal domain of 1-Cys peroxiredoxin ATY48_18010 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY48_18010 PF13192 Thioredoxin domain ATY48_18015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY48_18015 PF03466 LysR substrate binding domain ATY48_18020 PF01272 Transcription elongation factor, GreA/GreB, C-term ATY48_18020 PF14760 Rnk N-terminus ATY48_18025 PF00923 Transaldolase ATY48_18030 PF12760 Transposase zinc-ribbon domain ATY48_18030 PF12762 ATY48_18030 ATY48_18040 PF01965 DJ-1/PfpI family ATY48_18045 PF01625 Peptide methionine sulfoxide reductase ATY48_18050 PF08332 Calcium/calmodulin dependent protein kinase II Association ATY48_18060 PF01609 Transposase DDE domain ATY48_18070 PF13340 ATY48_18070 ATY48_18075 PF02627 Carboxymuconolactone decarboxylase family ATY48_18080 PF00462 Glutaredoxin ATY48_18085 PF01435 Peptidase family M48 ATY48_18090 PF00072 Response regulator receiver domain ATY48_18090 PF00486 Transcriptional regulatory protein, C terminal ATY48_18095 PF00512 His Kinase A (phospho-acceptor) domain ATY48_18095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_18095 PF11808 ATY48_18095 ATY48_18100 PF02503 Polyphosphate kinase middle domain ATY48_18100 PF13089 Polyphosphate kinase N-terminal domain ATY48_18100 PF13090 Polyphosphate kinase C-terminal domain ATY48_18105 PF02541 Ppx/GppA phosphatase family ATY48_18110 PF00534 Glycosyl transferases group 1 ATY48_18110 PF13439 Glycosyltransferase Family 4 ATY48_18115 PF01569 PAP2 superfamily ATY48_18120 PF00149 Calcineurin-like phosphoesterase ATY48_18130 PF04305 ATY48_18130 ATY48_18135 PF13522 Glutamine amidotransferase domain ATY48_18140 PF02674 ATY48_18140 ATY48_18145 PF05036 Sporulation related domain ATY48_18150 PF08245 Mur ligase middle domain ATY48_18155 PF00300 Histidine phosphatase superfamily (branch 1) ATY48_18160 PF10459 Peptidase S46 ATY48_18165 PF04185 Phosphoesterase family ATY48_18165 PF05506 ATY48_18165 ATY48_18170 PF00593 TonB dependent receptor ATY48_18170 PF07715 TonB-dependent Receptor Plug Domain ATY48_18175 PF00107 Zinc-binding dehydrogenase ATY48_18175 PF08240 Alcohol dehydrogenase GroES-like domain ATY48_18180 PF09694 ATY48_18180 ATY48_18185 PF00005 ABC transporter ATY48_18185 PF12857 ATY48_18185 ATY48_18190 PF00528 Binding-protein-dependent transport system inner membrane component ATY48_18195 PF00528 Binding-protein-dependent transport system inner membrane component ATY48_18200 PF13531 Bacterial extracellular solute-binding protein ATY48_18205 PF00155 Aminotransferase class I and II ATY48_18215 PF00849 RNA pseudouridylate synthase ATY48_18215 PF01479 S4 domain ATY48_18225 PF00691 OmpA family ATY48_18225 PF13505 Outer membrane protein beta-barrel domain ATY48_18230 PF08240 Alcohol dehydrogenase GroES-like domain ATY48_18230 PF13602 Zinc-binding dehydrogenase ATY48_18235 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ATY48_18235 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY48_18245 PF01527 Transposase ATY48_18270 PF01609 Transposase DDE domain ATY48_18275 PF00072 Response regulator receiver domain ATY48_18275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_18280 PF00072 Response regulator receiver domain ATY48_18285 PF09413 Domain of unknown function (DUF2007) ATY48_18290 PF13409 Glutathione S-transferase, N-terminal domain ATY48_18300 PF00749 tRNA synthetases class I (E and Q), catalytic domain ATY48_18300 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ATY48_18315 PF13586 ATY48_18315 ATY48_18320 PF13340 ATY48_18320 ATY48_18330 PF01609 Transposase DDE domain ATY48_18355 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ATY48_18360 PF01728 FtsJ-like methyltransferase ATY48_18365 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ATY48_18370 PF08450 SMP-30/Gluconolaconase/LRE-like region ATY48_18380 PF13202 EF hand ATY48_18385 PF12802 MarR family ATY48_18390 PF00378 Enoyl-CoA hydratase/isomerase family ATY48_18395 PF00171 Aldehyde dehydrogenase family ATY48_18400 PF00501 AMP-binding enzyme ATY48_18400 PF13193 AMP-binding enzyme C-terminal domain ATY48_18405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY48_18405 PF03466 LysR substrate binding domain ATY48_18415 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ATY48_18425 PF13358 DDE superfamily endonuclease ATY48_18430 PF12760 Transposase zinc-ribbon domain ATY48_18430 PF12762 ATY48_18430 ATY48_18435 PF13551 Winged helix-turn helix ATY48_18435 PF13592 ATY48_18435 ATY48_18445 PF01494 FAD binding domain ATY48_18450 PF01494 FAD binding domain ATY48_18460 PF01923 Cobalamin adenosyltransferase ATY48_18465 PF00850 Histone deacetylase domain ATY48_18470 PF03968 OstA-like protein ATY48_18470 PF04453 Organic solvent tolerance protein ATY48_18475 PF00639 PPIC-type PPIASE domain ATY48_18475 PF09312 SurA N-terminal domain ATY48_18475 PF13616 PPIC-type PPIASE domain ATY48_18480 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ATY48_18485 PF00398 Ribosomal RNA adenine dimethylase ATY48_18490 PF04379 Protein of unknown function (DUF525) ATY48_18495 PF00149 Calcineurin-like phosphoesterase ATY48_18500 PF00186 Dihydrofolate reductase ATY48_18510 PF00303 Thymidylate synthase ATY48_18515 PF01790 ATY48_18515 ATY48_18520 PF04536 TLP18 ATY48_18525 PF04536 TLP18 ATY48_18530 PF04011 LemA family ATY48_18535 PF01219 Prokaryotic diacylglycerol kinase ATY48_18545 PF00512 His Kinase A (phospho-acceptor) domain ATY48_18545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_18550 PF00072 Response regulator receiver domain ATY48_18550 PF00486 Transcriptional regulatory protein, C terminal ATY48_18555 PF13472 GDSL-like Lipase/Acylhydrolase family ATY48_18560 PF00005 ABC transporter ATY48_18565 PF02687 ATY48_18565 ATY48_18570 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ATY48_18580 PF00005 ABC transporter ATY48_18590 PF04342 ATY48_18590 ATY48_18600 PF10636 Hemin uptake protein hemP ATY48_18605 PF00248 Aldo/keto reductase family ATY48_18615 PF01773 Na+ dependent nucleoside transporter N-terminus ATY48_18615 PF07662 Na+ dependent nucleoside transporter C-terminus ATY48_18615 PF07670 Nucleoside recognition ATY48_18620 PF00294 pfkB family carbohydrate kinase ATY48_18630 PF08306 Glycosyl hydrolase family 98 ATY48_18630 PF08307 Glycosyl hydrolase family 98 C-terminal domain ATY48_18630 PF16990 ATY48_18630 ATY48_18635 PF01207 Dihydrouridine synthase (Dus) ATY48_18640 PF08241 Methyltransferase domain ATY48_18650 PF00438 S-adenosylmethionine synthetase, N-terminal domain ATY48_18650 PF02772 S-adenosylmethionine synthetase, central domain ATY48_18650 PF02773 S-adenosylmethionine synthetase, C-terminal domain ATY48_18655 PF13586 ATY48_18655 ATY48_18660 PF13340 ATY48_18660 ATY48_18665 PF00328 Histidine phosphatase superfamily (branch 2) ATY48_18670 PF00593 TonB dependent receptor ATY48_18670 PF07715 TonB-dependent Receptor Plug Domain ATY48_18680 PF13546 ATY48_18680 ATY48_18685 PF00440 Bacterial regulatory proteins, tetR family ATY48_18690 PF00311 Phosphoenolpyruvate carboxylase ATY48_18695 PF00326 Prolyl oligopeptidase family ATY48_18700 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ATY48_18700 PF05221 S-adenosyl-L-homocysteine hydrolase ATY48_18705 PF13649 Methyltransferase domain ATY48_18710 PF00685 Sulfotransferase domain ATY48_18720 PF11539 Protein of unknown function (DUF3228) ATY48_18725 PF09831 ATY48_18725 ATY48_18735 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ATY48_18750 PF00082 Subtilase family ATY48_18755 PF08240 Alcohol dehydrogenase GroES-like domain ATY48_18755 PF13602 Zinc-binding dehydrogenase ATY48_18765 PF02219 Methylenetetrahydrofolate reductase ATY48_18775 PF13358 DDE superfamily endonuclease ATY48_18775 PF13551 Winged helix-turn helix ATY48_18775 PF13592 ATY48_18775 ATY48_18780 PF00293 NUDIX domain ATY48_18780 PF02581 Thiamine monophosphate synthase/TENI ATY48_18790 PF01043 SecA preprotein cross-linking domain ATY48_18790 PF02810 SEC-C motif ATY48_18790 PF07516 SecA Wing and Scaffold domain ATY48_18790 PF07517 SecA DEAD-like domain ATY48_18795 PF01551 Peptidase family M23 ATY48_18800 PF05258 ATY48_18800 ATY48_18805 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ATY48_18810 PF00091 Tubulin/FtsZ family, GTPase domain ATY48_18810 PF12327 FtsZ family, C-terminal domain ATY48_18815 PF02491 SHS2 domain inserted in FTSA ATY48_18815 PF14450 Cell division protein FtsA ATY48_18820 PF03799 Cell division protein FtsQ ATY48_18820 PF08478 POTRA domain, FtsQ-type ATY48_18825 PF01820 D-ala D-ala ligase N-terminus ATY48_18825 PF07478 D-ala D-ala ligase C-terminus ATY48_18830 PF01225 Mur ligase family, catalytic domain ATY48_18830 PF02875 Mur ligase family, glutamate ligase domain ATY48_18830 PF08245 Mur ligase middle domain ATY48_18835 PF03033 Glycosyltransferase family 28 N-terminal domain ATY48_18835 PF04101 Glycosyltransferase family 28 C-terminal domain ATY48_18840 PF01098 ATY48_18840 ATY48_18845 PF00953 Glycosyl transferase family 4 ATY48_18850 PF01225 Mur ligase family, catalytic domain ATY48_18850 PF02875 Mur ligase family, glutamate ligase domain ATY48_18850 PF08245 Mur ligase middle domain ATY48_18855 PF01225 Mur ligase family, catalytic domain ATY48_18855 PF02875 Mur ligase family, glutamate ligase domain ATY48_18855 PF08245 Mur ligase middle domain ATY48_18860 PF00905 Penicillin binding protein transpeptidase domain ATY48_18860 PF03717 Penicillin-binding Protein dimerisation domain ATY48_18865 PF04999 ATY48_18865 ATY48_18870 PF01795 MraW methylase family ATY48_18875 PF02381 MraZ protein ATY48_18880 PF05742 ATY48_18880 ATY48_18890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ATY48_18895 PF04348 LppC putative lipoprotein ATY48_18900 PF02021 Uncharacterised protein family UPF0102 ATY48_18905 PF04307 ATY48_18905 ATY48_18910 PF01565 FAD binding domain ATY48_18910 PF02913 FAD linked oxidases, C-terminal domain ATY48_18915 PF00072 Response regulator receiver domain ATY48_18915 PF00486 Transcriptional regulatory protein, C terminal ATY48_18920 PF00512 His Kinase A (phospho-acceptor) domain ATY48_18920 PF00582 Universal stress protein family ATY48_18920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_18920 PF02702 Osmosensitive K+ channel His kinase sensor domain ATY48_18920 PF13493 Domain of unknown function (DUF4118) ATY48_18925 PF02669 ATY48_18925 ATY48_18930 PF00122 E1-E2 ATPase ATY48_18930 PF00702 haloacid dehalogenase-like hydrolase ATY48_18935 PF03814 ATY48_18935 ATY48_18940 PF09604 ATY48_18940 ATY48_18950 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ATY48_18955 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ATY48_18960 PF00586 AIR synthase related protein, N-terminal domain ATY48_18960 PF02769 AIR synthase related protein, C-terminal domain ATY48_18965 PF01029 NusB family ATY48_18970 PF00885 6,7-dimethyl-8-ribityllumazine synthase ATY48_18975 PF00925 GTP cyclohydrolase II ATY48_18975 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ATY48_18980 PF00677 Lumazine binding domain ATY48_18990 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ATY48_18990 PF01872 RibD C-terminal domain ATY48_18995 PF13673 Acetyltransferase (GNAT) domain ATY48_19000 PF03477 ATP cone domain ATY48_19010 PF00464 Serine hydroxymethyltransferase ATY48_19015 PF00593 TonB dependent receptor ATY48_19015 PF07715 TonB-dependent Receptor Plug Domain ATY48_19025 PF11776 Domain of unknown function (DUF3315) ATY48_19030 PF00005 ABC transporter ATY48_19030 PF12848 ABC transporter ATY48_19040 PF14329 ATY48_19040 ATY48_19045 PF14329 ATY48_19045 ATY48_19050 PF00756 Putative esterase ATY48_19060 PF00107 Zinc-binding dehydrogenase ATY48_19060 PF08240 Alcohol dehydrogenase GroES-like domain ATY48_19065 PF02583 Metal-sensitive transcriptional repressor ATY48_19070 PF00534 Glycosyl transferases group 1 ATY48_19075 PF00072 Response regulator receiver domain ATY48_19075 PF00486 Transcriptional regulatory protein, C terminal ATY48_19080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_19105 PF13546 ATY48_19105 ATY48_19115 PF04107 Glutamate-cysteine ligase family 2(GCS2) ATY48_19120 PF01988 ATY48_19120 ATY48_19125 PF01609 Transposase DDE domain ATY48_19130 PF01926 50S ribosome-binding GTPase ATY48_19135 PF00034 Cytochrome c ATY48_19140 PF13462 Thioredoxin ATY48_19145 PF01323 DSBA-like thioredoxin domain ATY48_19150 PF03372 Endonuclease/Exonuclease/phosphatase family ATY48_19155 PF02028 BCCT family transporter ATY48_19165 PF01527 Transposase ATY48_19170 PF01609 Transposase DDE domain ATY48_19170 PF05598 ATY48_19170 ATY48_19175 PF00291 Pyridoxal-phosphate dependent enzyme ATY48_19175 PF01053 Cys/Met metabolism PLP-dependent enzyme ATY48_19180 PF13340 ATY48_19180 ATY48_19185 PF13586 ATY48_19185 ATY48_19190 PF01609 Transposase DDE domain ATY48_19190 PF05598 ATY48_19190 ATY48_19195 PF01609 Transposase DDE domain ATY48_19195 PF05598 ATY48_19195 ATY48_19200 PF01527 Transposase ATY48_19210 PF01609 Transposase DDE domain ATY48_19215 PF01609 Transposase DDE domain ATY48_19220 PF01743 Poly A polymerase head domain ATY48_19220 PF01966 HD domain ATY48_19220 PF12627 Probable RNA and SrmB- binding site of polymerase A ATY48_19225 PF12760 Transposase zinc-ribbon domain ATY48_19225 PF12762 ATY48_19225 ATY48_19230 PF13936 Helix-turn-helix domain ATY48_19235 PF01609 Transposase DDE domain ATY48_19235 PF05598 ATY48_19235 ATY48_19240 PF13340 ATY48_19240 ATY48_19245 PF13586 ATY48_19245 ATY48_19255 PF12760 Transposase zinc-ribbon domain ATY48_19255 PF12762 ATY48_19255 ATY48_19265 PF14559 Tetratricopeptide repeat ATY48_19270 PF01522 Polysaccharide deacetylase ATY48_19270 PF14883 Hypothetical glycosyl hydrolase family 13 ATY48_19275 PF13641 Glycosyltransferase like family 2 ATY48_19280 PF13994 ATY48_19280 ATY48_19285 PF01979 Amidohydrolase family ATY48_19290 PF01380 SIS domain ATY48_19295 PF00356 Bacterial regulatory proteins, lacI family ATY48_19295 PF13377 Periplasmic binding protein-like domain ATY48_19300 PF07690 Major Facilitator Superfamily ATY48_19305 PF00392 Bacterial regulatory proteins, gntR family ATY48_19305 PF07702 UTRA domain ATY48_19310 PF07786 ATY48_19310 ATY48_19320 PF00703 Glycosyl hydrolases family 2 ATY48_19320 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ATY48_19320 PF02837 Glycosyl hydrolases family 2, sugar binding domain ATY48_19320 PF16355 ATY48_19320 ATY48_19325 PF00593 TonB dependent receptor ATY48_19325 PF07715 TonB-dependent Receptor Plug Domain ATY48_19345 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase ATY48_19350 PF13561 Enoyl-(Acyl carrier protein) reductase ATY48_19355 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ATY48_19360 PF00072 Response regulator receiver domain ATY48_19360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_19365 PF00072 Response regulator receiver domain ATY48_19370 PF00512 His Kinase A (phospho-acceptor) domain ATY48_19370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_19370 PF05227 CHASE3 domain ATY48_19370 PF13188 PAS domain ATY48_19375 PF04972 BON domain ATY48_19380 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ATY48_19380 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ATY48_19385 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ATY48_19385 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ATY48_19395 PF05433 ATY48_19395 ATY48_19400 PF10001 ATY48_19400 ATY48_19410 PF01555 DNA methylase ATY48_19420 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ATY48_19425 PF00293 NUDIX domain ATY48_19425 PF01467 Cytidylyltransferase ATY48_19435 PF01609 Transposase DDE domain ATY48_19435 PF05598 ATY48_19435 ATY48_19445 PF00595 PDZ domain (Also known as DHR or GLGF) ATY48_19445 PF03572 Peptidase family S41 ATY48_19445 PF11818 ATY48_19445 ATY48_19450 PF06616 BsuBI/PstI restriction endonuclease C-terminus ATY48_19455 PF07669 Eco57I restriction-modification methylase ATY48_19460 PF04055 Radical SAM superfamily ATY48_19460 PF16881 ATY48_19460 ATY48_19465 PF03099 Biotin/lipoate A/B protein ligase family ATY48_19470 PF04359 Protein of unknown function (DUF493) ATY48_19480 PF00768 D-alanyl-D-alanine carboxypeptidase ATY48_19480 PF07943 Penicillin-binding protein 5, C-terminal domain ATY48_19490 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel ATY48_19490 PF05036 Sporulation related domain ATY48_19495 PF13406 Transglycosylase SLT domain ATY48_19515 PF13936 Helix-turn-helix domain ATY48_19530 PF01098 ATY48_19530 ATY48_19535 PF00905 Penicillin binding protein transpeptidase domain ATY48_19535 PF03717 Penicillin-binding Protein dimerisation domain ATY48_19540 PF04093 ATY48_19540 ATY48_19545 PF04085 rod shape-determining protein MreC ATY48_19550 PF06723 MreB/Mbl protein ATY48_19555 PF00294 pfkB family carbohydrate kinase ATY48_19570 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ATY48_19575 PF13673 Acetyltransferase (GNAT) domain ATY48_19585 PF13518 Helix-turn-helix domain ATY48_19590 PF16576 ATY48_19590 ATY48_19600 PF01209 ubiE/COQ5 methyltransferase family ATY48_19605 PF00990 GGDEF domain ATY48_19610 PF01433 Peptidase family M1 ATY48_19610 PF09127 Leukotriene A4 hydrolase, C-terminal ATY48_19620 PF00702 haloacid dehalogenase-like hydrolase ATY48_19625 PF00004 ATPase family associated with various cellular activities (AAA) ATY48_19625 PF07724 AAA domain (Cdc48 subfamily) ATY48_19625 PF10431 C-terminal, D2-small domain, of ClpB protein ATY48_19630 PF00227 Proteasome subunit ATY48_19635 PF00589 Phage integrase family ATY48_19635 PF02899 Phage integrase, N-terminal SAM-like domain ATY48_19640 PF04340 Protein of unknown function, DUF484 ATY48_19645 PF01678 Diaminopimelate epimerase ATY48_19650 PF13627 ATY48_19650 ATY48_19655 PF04304 ATY48_19655 ATY48_19660 PF00326 Prolyl oligopeptidase family ATY48_19660 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ATY48_19665 PF00155 Aminotransferase class I and II ATY48_19675 PF00326 Prolyl oligopeptidase family ATY48_19675 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ATY48_19685 PF08212 Lipocalin-like domain ATY48_19690 PF08279 HTH domain ATY48_19690 PF13280 ATY48_19690 ATY48_19695 PF04338 Protein of unknown function, DUF481 ATY48_19700 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ATY48_19700 PF03900 Porphobilinogen deaminase, C-terminal domain ATY48_19705 PF00072 Response regulator receiver domain ATY48_19705 PF04397 LytTr DNA-binding domain ATY48_19710 PF06580 ATY48_19710 ATY48_19715 PF02230 Phospholipase/Carboxylesterase ATY48_19720 PF13632 Glycosyl transferase family group 2 ATY48_19725 PF13340 ATY48_19725 ATY48_19730 PF13586 ATY48_19730 ATY48_19735 PF02225 PA domain ATY48_19735 PF04389 Peptidase family M28 ATY48_19740 PF00990 GGDEF domain ATY48_19750 PF00916 ATY48_19750 ATY48_19750 PF01740 STAS domain ATY48_19755 PF00150 Cellulase (glycosyl hydrolase family 5) ATY48_19755 PF00553 Cellulose binding domain ATY48_19770 PF00990 GGDEF domain ATY48_19770 PF01590 GAF domain ATY48_19770 PF08447 PAS fold ATY48_19770 PF08448 PAS fold ATY48_19775 PF00675 Insulinase (Peptidase family M16) ATY48_19775 PF05193 Peptidase M16 inactive domain ATY48_19780 PF01590 GAF domain ATY48_19790 PF13586 ATY48_19790 ATY48_19795 PF13340 ATY48_19795 ATY48_19805 PF01904 Protein of unknown function DUF72 ATY48_19810 PF01204 Trehalase ATY48_19815 PF01382 Avidin family ATY48_19825 PF01987 Mitochondrial biogenesis AIM24 ATY48_19830 PF01544 CorA-like Mg2+ transporter protein ATY48_19840 PF00324 Amino acid permease ATY48_19845 PF01341 Glycosyl hydrolases family 6 ATY48_19850 PF00150 Cellulase (glycosyl hydrolase family 5) ATY48_19855 PF00892 EamA-like transporter family ATY48_19860 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ATY48_19870 PF13518 Helix-turn-helix domain ATY48_19875 PF13358 DDE superfamily endonuclease ATY48_19880 PF07759 ATY48_19880 ATY48_19895 PF08887 ATY48_19895 ATY48_19900 PF00326 Prolyl oligopeptidase family ATY48_19900 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ATY48_19905 PF00326 Prolyl oligopeptidase family ATY48_19915 PF00106 short chain dehydrogenase ATY48_19915 PF13561 Enoyl-(Acyl carrier protein) reductase ATY48_19930 PF01527 Transposase ATY48_19935 PF01212 Beta-eliminating lyase ATY48_19940 PF00425 chorismate binding enzyme ATY48_19940 PF04715 Anthranilate synthase component I, N terminal region ATY48_19945 PF00781 Diacylglycerol kinase catalytic domain ATY48_19950 PF00583 Acetyltransferase (GNAT) family ATY48_19955 PF00834 Ribulose-phosphate 3 epimerase family ATY48_19960 PF00226 DnaJ domain ATY48_19970 PF01936 NYN domain ATY48_19980 PF07504 Fungalysin/Thermolysin Propeptide Motif ATY48_19985 PF01447 Thermolysin metallopeptidase, catalytic domain ATY48_19985 PF02868 Thermolysin metallopeptidase, alpha-helical domain ATY48_19990 PF02868 Thermolysin metallopeptidase, alpha-helical domain ATY48_19995 PF06127 ATY48_19995 ATY48_20005 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains ATY48_20005 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ATY48_20005 PF04039 ATY48_20005 ATY48_20005 PF13244 ATY48_20005 ATY48_20010 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ATY48_20015 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains ATY48_20020 PF01899 ATY48_20020 ATY48_20025 PF04066 ATY48_20025 ATY48_20030 PF03334 ATY48_20030 ATY48_20035 PF01609 Transposase DDE domain ATY48_20035 PF05598 ATY48_20035 ATY48_20040 PF04209 homogentisate 1,2-dioxygenase ATY48_20045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ATY48_20045 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ATY48_20050 PF12802 MarR family ATY48_20055 PF13899 Thioredoxin-like ATY48_20060 PF00854 POT family ATY48_20065 PF03301 Tryptophan 2,3-dioxygenase ATY48_20070 PF00932 Lamin Tail Domain ATY48_20085 PF12760 Transposase zinc-ribbon domain ATY48_20085 PF12762 ATY48_20085 ATY48_20095 PF07653 Variant SH3 domain ATY48_20100 PF13586 ATY48_20100 ATY48_20105 PF13340 ATY48_20105 ATY48_20115 PF00108 Thiolase, N-terminal domain ATY48_20115 PF02803 Thiolase, C-terminal domain ATY48_20125 PF07219 ATY48_20125 ATY48_20130 PF04375 ATY48_20130 ATY48_20135 PF02602 Uroporphyrinogen-III synthase HemD ATY48_20140 PF01755 ATY48_20140 ATY48_20145 PF01609 Transposase DDE domain ATY48_20160 PF13546 ATY48_20160 ATY48_20165 PF01609 Transposase DDE domain ATY48_20165 PF05598 ATY48_20165 ATY48_20170 PF13419 Haloacid dehalogenase-like hydrolase ATY48_20175 PF13202 EF hand ATY48_20180 PF13202 EF hand ATY48_20190 PF14255 ATY48_20190 ATY48_20195 PF01427 D-ala-D-ala dipeptidase ATY48_20200 PF01510 N-acetylmuramoyl-L-alanine amidase ATY48_20205 PF00877 NlpC/P60 family ATY48_20205 PF12913 SH3 domain of the SH3b1 type ATY48_20205 PF12914 SH3 domain of SH3b2 type ATY48_20210 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ATY48_20210 PF13378 Enolase C-terminal domain-like ATY48_20215 PF01609 Transposase DDE domain ATY48_20220 PF01609 Transposase DDE domain ATY48_20225 PF13340 ATY48_20225 ATY48_20230 PF12760 Transposase zinc-ribbon domain ATY48_20230 PF12762 ATY48_20230 ATY48_20235 PF13586 ATY48_20235 ATY48_20240 PF13340 ATY48_20240 ATY48_20250 PF13520 Amino acid permease ATY48_20255 PF13586 ATY48_20255 ATY48_20260 PF01610 ATY48_20260 ATY48_20260 PF13542 ATY48_20260 ATY48_20265 PF13340 ATY48_20265 ATY48_20280 PF05360 ATY48_20280 ATY48_20285 PF07995 Glucose / Sorbosone dehydrogenase ATY48_20295 PF13551 Winged helix-turn helix ATY48_20295 PF13592 ATY48_20295 ATY48_20300 PF12760 Transposase zinc-ribbon domain ATY48_20300 PF12762 ATY48_20300 ATY48_20310 PF12760 Transposase zinc-ribbon domain ATY48_20310 PF12762 ATY48_20310 ATY48_20315 PF00665 Integrase core domain ATY48_20320 PF00933 Glycosyl hydrolase family 3 N terminal domain ATY48_20320 PF01915 Glycosyl hydrolase family 3 C-terminal domain ATY48_20320 PF14310 Fibronectin type III-like domain ATY48_20325 PF02152 Dihydroneopterin aldolase ATY48_20330 PF00814 Glycoprotease family ATY48_20335 PF01165 Ribosomal protein S21 ATY48_20340 PF09424 Yqey-like protein ATY48_20345 PF03631 ATY48_20345 ATY48_20350 PF01807 CHC2 zinc finger ATY48_20350 PF08275 DNA primase catalytic core, N-terminal domain ATY48_20350 PF08278 DNA primase DnaG DnaB-binding ATY48_20350 PF10410 DnaB-helicase binding domain of primase ATY48_20350 PF13155 Toprim-like ATY48_20355 PF13546 ATY48_20355 ATY48_20370 PF13593 SBF-like CPA transporter family (DUF4137) ATY48_20375 PF13899 Thioredoxin-like ATY48_20380 PF01040 UbiA prenyltransferase family ATY48_20385 PF02628 ATY48_20385 ATY48_20395 PF02104 ATY48_20395 ATY48_20400 PF11137 ATY48_20400 ATY48_20405 PF00510 Cytochrome c oxidase subunit III ATY48_20410 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 ATY48_20415 PF00115 Cytochrome C and Quinol oxidase polypeptide I ATY48_20420 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ATY48_20420 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ATY48_20425 PF10003 ATY48_20425 ATY48_20430 PF00171 Aldehyde dehydrogenase family ATY48_20430 PF01619 Proline dehydrogenase ATY48_20430 PF14850 DNA-binding domain of Proline dehydrogenase ATY48_20435 PF01527 Transposase ATY48_20445 PF12760 Transposase zinc-ribbon domain ATY48_20445 PF12762 ATY48_20445 ATY48_20450 PF00210 Ferritin-like domain ATY48_20455 PF04324 BFD-like [2Fe-2S] binding domain ATY48_20460 PF00293 NUDIX domain ATY48_20475 PF00380 Ribosomal protein S9/S16 ATY48_20480 PF00572 Ribosomal protein L13 ATY48_20485 PF03232 ATY48_20485 ATY48_20490 PF00893 Small Multidrug Resistance protein ATY48_20495 PF02675 S-adenosylmethionine decarboxylase ATY48_20500 PF00027 Cyclic nucleotide-binding domain ATY48_20500 PF00325 Bacterial regulatory proteins, crp family ATY48_20505 PF12710 haloacid dehalogenase-like hydrolase ATY48_20510 PF00218 Indole-3-glycerol phosphate synthase ATY48_20515 PF00591 Glycosyl transferase family, a/b domain ATY48_20515 PF02885 Glycosyl transferase family, helical bundle domain ATY48_20520 PF01613 Flavin reductase like domain ATY48_20530 PF00117 Glutamine amidotransferase class-I ATY48_20540 PF01527 Transposase ATY48_20545 PF13276 ATY48_20545 ATY48_20545 PF13683 ATY48_20545 ATY48_20550 PF03466 LysR substrate binding domain ATY48_20555 PF03971 Monomeric isocitrate dehydrogenase ATY48_20565 PF01609 Transposase DDE domain ATY48_20565 PF05598 ATY48_20565 ATY48_20580 PF01609 Transposase DDE domain ATY48_20585 PF01609 Transposase DDE domain ATY48_20590 PF01609 Transposase DDE domain ATY48_20605 PF01609 Transposase DDE domain ATY48_20605 PF05598 ATY48_20605 ATY48_20610 PF00665 Integrase core domain ATY48_20610 PF13936 Helix-turn-helix domain ATY48_20615 PF00872 ATY48_20615 ATY48_20620 PF14489 QueF-like protein ATY48_20620 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ATY48_20630 PF01546 Peptidase family M20/M25/M40 ATY48_20630 PF07687 Peptidase dimerisation domain ATY48_20635 PF16576 ATY48_20635 ATY48_20640 PF00873 AcrB/AcrD/AcrF family ATY48_20645 PF00873 AcrB/AcrD/AcrF family ATY48_20650 PF07063 Domain of unknown function (DUF1338) ATY48_20655 PF01609 Transposase DDE domain ATY48_20660 PF12760 Transposase zinc-ribbon domain ATY48_20660 PF12762 ATY48_20660 ATY48_20665 PF12760 Transposase zinc-ribbon domain ATY48_20665 PF12762 ATY48_20665 ATY48_20670 PF09500 Putative thioesterase (yiiD_Cterm) ATY48_20680 PF00581 Rhodanese-like domain ATY48_20685 PF02556 Preprotein translocase subunit SecB ATY48_20690 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ATY48_20690 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ATY48_20700 PF00205 Thiamine pyrophosphate enzyme, central domain ATY48_20700 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ATY48_20700 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ATY48_20705 PF00512 His Kinase A (phospho-acceptor) domain ATY48_20705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_20710 PF00072 Response regulator receiver domain ATY48_20710 PF00158 Sigma-54 interaction domain ATY48_20710 PF02954 Bacterial regulatory protein, Fis family ATY48_20725 PF07690 Major Facilitator Superfamily ATY48_20730 PF00588 SpoU rRNA Methylase family ATY48_20740 PF13698 ATY48_20740 ATY48_20745 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ATY48_20745 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ATY48_20750 PF02661 Fic/DOC family ATY48_20750 PF13784 Fic/DOC family N-terminal ATY48_20755 PF01555 DNA methylase ATY48_20760 PF04851 Type III restriction enzyme, res subunit ATY48_20765 PF00561 alpha/beta hydrolase fold ATY48_20770 PF03692 ATY48_20770 ATY48_20775 PF00501 AMP-binding enzyme ATY48_20780 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family ATY48_20785 PF01609 Transposase DDE domain ATY48_20785 PF05598 ATY48_20785 ATY48_20790 PF12802 MarR family ATY48_20795 PF11871 ATY48_20795 ATY48_20795 PF13487 HD domain ATY48_20800 PF07690 Major Facilitator Superfamily ATY48_20810 PF12760 Transposase zinc-ribbon domain ATY48_20810 PF12762 ATY48_20810 ATY48_20820 PF13586 ATY48_20820 ATY48_20825 PF13358 DDE superfamily endonuclease ATY48_20825 PF13551 Winged helix-turn helix ATY48_20825 PF13592 ATY48_20825 ATY48_20830 PF00132 Bacterial transferase hexapeptide (six repeats) ATY48_20840 PF00920 Dehydratase family ATY48_20845 PF00589 Phage integrase family ATY48_20845 PF13495 Phage integrase, N-terminal SAM-like domain ATY48_20850 PF05598 ATY48_20850 ATY48_20855 PF01609 Transposase DDE domain ATY48_20860 PF01610 ATY48_20860 ATY48_20860 PF13542 ATY48_20860 ATY48_20865 PF01609 Transposase DDE domain ATY48_20865 PF05598 ATY48_20865 ATY48_20875 PF01218 Coproporphyrinogen III oxidase ATY48_20880 PF00476 DNA polymerase family A ATY48_20880 PF01367 5'-3' exonuclease, C-terminal SAM fold ATY48_20880 PF01612 3'-5' exonuclease ATY48_20880 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ATY48_20885 PF11191 Protein of unknown function (DUF2782) ATY48_20890 PF13276 ATY48_20890 ATY48_20890 PF13683 ATY48_20890 ATY48_20895 PF01527 Transposase ATY48_20905 PF00456 Transketolase, thiamine diphosphate binding domain ATY48_20910 PF07745 Glycosyl hydrolase family 53 ATY48_20915 PF07745 Glycosyl hydrolase family 53 ATY48_20925 PF01764 Lipase (class 3) ATY48_20930 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY48_20940 PF05598 ATY48_20940 ATY48_20945 PF01609 Transposase DDE domain ATY48_20965 PF00672 HAMP domain ATY48_20965 PF02743 Cache domain ATY48_20965 PF07228 Stage II sporulation protein E (SpoIIE) ATY48_20970 PF13581 Histidine kinase-like ATPase domain ATY48_20975 PF13466 STAS domain ATY48_20980 PF04264 YceI-like domain ATY48_20985 PF00881 Nitroreductase family ATY48_20990 PF06258 ATY48_20990 ATY48_21015 PF09286 Pro-kumamolisin, activation domain ATY48_21020 PF02592 ATY48_21020 ATY48_21025 PF03710 Glutamate-ammonia ligase adenylyltransferase ATY48_21025 PF08335 GlnD PII-uridylyltransferase ATY48_21035 PF08450 SMP-30/Gluconolaconase/LRE-like region ATY48_21060 PF12760 Transposase zinc-ribbon domain ATY48_21060 PF12762 ATY48_21060 ATY48_21080 PF00793 DAHP synthetase I family ATY48_21085 PF00593 TonB dependent receptor ATY48_21090 PF07715 TonB-dependent Receptor Plug Domain ATY48_21100 PF00118 TCP-1/cpn60 chaperonin family ATY48_21105 PF00166 Chaperonin 10 Kd subunit ATY48_21120 PF01936 NYN domain ATY48_21120 PF12872 OST-HTH/LOTUS domain ATY48_21135 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY48_21145 PF00140 Sigma-70 factor, region 1 ATY48_21145 PF04542 Sigma-70 region 2 ATY48_21145 PF04545 Sigma-70, region 4 ATY48_21150 PF03167 Uracil DNA glycosylase superfamily ATY48_21155 PF00072 Response regulator receiver domain ATY48_21165 PF00005 ABC transporter ATY48_21170 PF00270 DEAD/DEAH box helicase ATY48_21170 PF00271 Helicase conserved C-terminal domain ATY48_21170 PF12300 ATY48_21170 ATY48_21175 PF00085 Thioredoxin ATY48_21180 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATY48_21180 PF07497 Rho termination factor, RNA-binding domain ATY48_21180 PF07498 Rho termination factor, N-terminal domain ATY48_21200 PF01103 Surface antigen ATY48_21200 PF07244 Surface antigen variable number repeat ATY48_21200 PF17243 ATY48_21200 ATY48_21205 PF04357 ATY48_21205 ATY48_21210 PF13551 Winged helix-turn helix ATY48_21210 PF13592 ATY48_21210 ATY48_21220 PF03176 MMPL family ATY48_21230 PF03279 ATY48_21230 ATY48_21235 PF07977 FabA-like domain ATY48_21240 PF01553 Acyltransferase ATY48_21250 PF00550 Phosphopantetheine attachment site ATY48_21255 PF01494 FAD binding domain ATY48_21270 PF00501 AMP-binding enzyme ATY48_21275 PF00326 Prolyl oligopeptidase family ATY48_21275 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ATY48_21300 PF04191 Phospholipid methyltransferase ATY48_21305 PF01638 HxlR-like helix-turn-helix ATY48_21310 PF05368 NmrA-like family ATY48_21320 PF03812 ATY48_21320 ATY48_21325 PF01717 Cobalamin-independent synthase, Catalytic domain ATY48_21330 PF08908 ATY48_21330 ATY48_21335 PF03358 NADPH-dependent FMN reductase ATY48_21340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY48_21340 PF03466 LysR substrate binding domain ATY48_21345 PF02677 ATY48_21345 ATY48_21350 PF02219 Methylenetetrahydrofolate reductase ATY48_21355 PF00512 His Kinase A (phospho-acceptor) domain ATY48_21360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_21365 PF00072 Response regulator receiver domain ATY48_21365 PF00486 Transcriptional regulatory protein, C terminal ATY48_21370 PF00551 Formyl transferase ATY48_21370 PF01842 ACT domain ATY48_21380 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ATY48_21380 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ATY48_21385 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ATY48_21390 PF02146 Sir2 family ATY48_21395 PF00376 MerR family regulatory protein ATY48_21400 PF07690 Major Facilitator Superfamily ATY48_21405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY48_21405 PF03466 LysR substrate binding domain ATY48_21415 PF01026 TatD related DNase ATY48_21425 PF00326 Prolyl oligopeptidase family ATY48_21435 PF12760 Transposase zinc-ribbon domain ATY48_21435 PF12762 ATY48_21435 ATY48_21445 PF13340 ATY48_21445 ATY48_21450 PF13586 ATY48_21450 ATY48_21455 PF13358 DDE superfamily endonuclease ATY48_21455 PF13551 Winged helix-turn helix ATY48_21455 PF13592 ATY48_21455 ATY48_21465 PF00266 Aminotransferase class-V ATY48_21470 PF01522 Polysaccharide deacetylase ATY48_21475 PF11533 Protein of unknown function (DUF3225) ATY48_21480 PF09349 OHCU decarboxylase ATY48_21495 PF01609 Transposase DDE domain ATY48_21515 PF01609 Transposase DDE domain ATY48_21515 PF05598 ATY48_21515 ATY48_21520 PF00665 Integrase core domain ATY48_21525 PF00326 Prolyl oligopeptidase family ATY48_21530 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain ATY48_21530 PF00364 Biotin-requiring enzyme ATY48_21530 PF02785 Biotin carboxylase C-terminal domain ATY48_21530 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ATY48_21535 PF01039 Carboxyl transferase domain ATY48_21540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATY48_21540 PF02770 Acyl-CoA dehydrogenase, middle domain ATY48_21540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATY48_21545 PF00440 Bacterial regulatory proteins, tetR family ATY48_21555 PF11804 ATY48_21555 ATY48_21565 PF03929 ATY48_21565 ATY48_21570 PF03929 ATY48_21570 ATY48_21575 PF12365 ATY48_21575 ATY48_21585 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ATY48_21595 PF03203 ATY48_21595 ATY48_21600 PF02492 CobW/HypB/UreG, nucleotide-binding domain ATY48_21600 PF07683 Cobalamin synthesis protein cobW C-terminal domain ATY48_21615 PF12146 Putative lysophospholipase ATY48_21620 PF03969 AFG1-like ATPase ATY48_21625 PF00005 ABC transporter ATY48_21635 PF00593 TonB dependent receptor ATY48_21635 PF07715 TonB-dependent Receptor Plug Domain ATY48_21640 PF13469 Sulfotransferase family ATY48_21645 PF02092 ATY48_21645 ATY48_21645 PF05746 DALR anticodon binding domain ATY48_21650 PF02091 Glycyl-tRNA synthetase alpha subunit ATY48_21655 PF00437 Type II/IV secretion system protein ATY48_21655 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ATY48_21665 PF01609 Transposase DDE domain ATY48_21670 PF00117 Glutamine amidotransferase class-I ATY48_21680 PF00902 Sec-independent protein translocase protein (TatC) ATY48_21685 PF02416 mttA/Hcf106 family ATY48_21690 PF02416 mttA/Hcf106 family ATY48_21695 PF04366 ATY48_21695 ATY48_21700 PF00762 Ferrochelatase ATY48_21705 PF00561 alpha/beta hydrolase fold ATY48_21715 PF01863 Protein of unknown function DUF45 ATY48_21720 PF04381 Putative exonuclease, RdgC ATY48_21725 PF01171 PP-loop family ATY48_21735 PF00356 Bacterial regulatory proteins, lacI family ATY48_21735 PF13377 Periplasmic binding protein-like domain ATY48_21740 PF03648 Glycosyl hydrolase family 67 N-terminus ATY48_21740 PF07477 Glycosyl hydrolase family 67 C-terminus ATY48_21740 PF07488 Glycosyl hydrolase family 67 middle domain ATY48_21745 PF02837 Glycosyl hydrolases family 2, sugar binding domain ATY48_21745 PF03629 Domain of unknown function (DUF303) ATY48_21750 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ATY48_21750 PF13378 Enolase C-terminal domain-like ATY48_21755 PF04616 Glycosyl hydrolases family 43 ATY48_21760 PF00933 Glycosyl hydrolase family 3 N terminal domain ATY48_21760 PF01915 Glycosyl hydrolase family 3 C-terminal domain ATY48_21760 PF07691 PA14 domain ATY48_21760 PF14310 Fibronectin type III-like domain ATY48_21765 PF01232 Mannitol dehydrogenase Rossmann domain ATY48_21765 PF08125 Mannitol dehydrogenase C-terminal domain ATY48_21785 PF02614 Glucuronate isomerase ATY48_21790 PF00331 Glycosyl hydrolase family 10 ATY48_21795 PF00331 Glycosyl hydrolase family 10 ATY48_21805 PF07690 Major Facilitator Superfamily ATY48_21810 PF00593 TonB dependent receptor ATY48_21810 PF07715 TonB-dependent Receptor Plug Domain ATY48_21815 PF13347 MFS/sugar transport protein ATY48_21820 PF04616 Glycosyl hydrolases family 43 ATY48_21825 PF01610 ATY48_21825 ATY48_21825 PF13542 ATY48_21825 ATY48_21830 PF01609 Transposase DDE domain ATY48_21840 PF12760 Transposase zinc-ribbon domain ATY48_21840 PF12762 ATY48_21840 ATY48_21845 PF12792 ATY48_21845 ATY48_21850 PF13340 ATY48_21850 ATY48_21855 PF13586 ATY48_21855 ATY48_21865 PF00487 ATY48_21865 ATY48_21870 PF00111 2Fe-2S iron-sulfur cluster binding domain ATY48_21870 PF00175 Oxidoreductase NAD-binding domain ATY48_21870 PF00970 Oxidoreductase FAD-binding domain ATY48_21875 PF00440 Bacterial regulatory proteins, tetR family ATY48_21880 PF01609 Transposase DDE domain ATY48_21885 PF13340 ATY48_21885 ATY48_21890 PF13546 ATY48_21890 ATY48_21895 PF00665 Integrase core domain ATY48_21895 PF13936 Helix-turn-helix domain ATY48_21900 PF11379 ATY48_21900 ATY48_21905 PF11379 ATY48_21905 ATY48_21910 PF01047 MarR family ATY48_21915 PF02566 OsmC-like protein ATY48_21920 PF11101 ATY48_21920 ATY48_21940 PF01609 Transposase DDE domain ATY48_21950 PF13560 Helix-turn-helix domain ATY48_21955 PF15579 ATY48_21955 ATY48_21960 PF15648 ATY48_21960 ATY48_21975 PF05488 PAAR motif ATY48_21995 PF01156 Inosine-uridine preferring nucleoside hydrolase ATY48_22000 PF01381 Helix-turn-helix ATY48_22005 PF05015 Plasmid maintenance system killer protein ATY48_22010 PF13245 Part of AAA domain ATY48_22010 PF13538 UvrD-like helicase C-terminal domain ATY48_22015 PF00580 UvrD/REP helicase N-terminal domain ATY48_22015 PF12705 PD-(D/E)XK nuclease superfamily ATY48_22015 PF13361 UvrD-like helicase C-terminal domain ATY48_22020 PF04257 Exodeoxyribonuclease V, gamma subunit ATY48_22035 PF07484 Phage Tail Collar Domain ATY48_22040 PF07484 Phage Tail Collar Domain ATY48_22045 PF07484 Phage Tail Collar Domain ATY48_22050 PF12760 Transposase zinc-ribbon domain ATY48_22050 PF12762 ATY48_22050 ATY48_22055 PF13358 DDE superfamily endonuclease ATY48_22060 PF00080 Copper/zinc superoxide dismutase (SODC) ATY48_22065 PF00080 Copper/zinc superoxide dismutase (SODC) ATY48_22070 PF00072 Response regulator receiver domain ATY48_22070 PF00158 Sigma-54 interaction domain ATY48_22070 PF02954 Bacterial regulatory protein, Fis family ATY48_22075 PF00512 His Kinase A (phospho-acceptor) domain ATY48_22075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY48_22080 PF00909 Ammonium Transporter Family ATY48_22085 PF00543 Nitrogen regulatory protein P-II ATY48_22090 PF00120 Glutamine synthetase, catalytic domain ATY48_22090 PF03951 Glutamine synthetase, beta-Grasp domain ATY48_22095 PF02673 ATY48_22095 ATY48_22100 PF03724 META domain ATY48_22100 PF14302 ATY48_22100 ATY48_22110 PF01161 Phosphatidylethanolamine-binding protein ATY48_22115 PF13432 Tetratricopeptide repeat ATY48_22125 PF12697 Alpha/beta hydrolase family ATY48_22130 PF01553 Acyltransferase ATY48_22135 PF03061 Thioesterase superfamily ATY48_22140 PF13091 PLD-like domain ATY48_22145 PF04264 YceI-like domain ATY48_22150 PF00300 Histidine phosphatase superfamily (branch 1) ATY48_22155 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ATY48_22160 PF03547 ATY48_22160 ATY48_22170 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ATY48_22175 PF13560 Helix-turn-helix domain ATY48_22180 PF07804 HipA-like C-terminal domain ATY48_22180 PF13657 HipA N-terminal domain ATY48_22185 PF10017 ATY48_22185 ATY48_22190 PF03781 Sulfatase-modifying factor enzyme 1 ATY48_22190 PF12867 DinB superfamily ATY48_22195 PF00266 Aminotransferase class-V ATY48_22200 PF00528 Binding-protein-dependent transport system inner membrane component ATY48_22200 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ATY48_22205 PF00005 ABC transporter ATY48_22210 PF13202 EF hand ATY48_22215 PF00487 ATY48_22215 ATY48_22220 PF00005 ABC transporter ATY48_22230 PF01734 Patatin-like phospholipase ATY48_22235 PF12760 Transposase zinc-ribbon domain ATY48_22235 PF12762 ATY48_22235 ATY48_22245 PF01609 Transposase DDE domain ATY48_22245 PF05598 ATY48_22245 ATY48_22250 PF13276 ATY48_22250 ATY48_22250 PF13683 ATY48_22250 ATY48_22255 PF01527 Transposase ATY48_22260 PF01609 Transposase DDE domain ATY48_22270 PF00248 Aldo/keto reductase family ATY48_22275 PF00107 Zinc-binding dehydrogenase ATY48_22275 PF16884 ATY48_22275 ATY48_22280 PF00248 Aldo/keto reductase family ATY48_22290 PF00849 RNA pseudouridylate synthase ATY48_22305 PF00271 Helicase conserved C-terminal domain ATY48_22305 PF04408 Helicase associated domain (HA2) ATY48_22305 PF08482 ATY48_22305 ATY48_22310 PF07308 ATY48_22310 ATY48_22315 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ATY48_22315 PF13378 Enolase C-terminal domain-like ATY48_22320 PF01557 Fumarylacetoacetate (FAA) hydrolase family ATY48_22325 PF13561 Enoyl-(Acyl carrier protein) reductase ATY48_22330 PF04909 Amidohydrolase ATY48_22335 PF00248 Aldo/keto reductase family ATY48_22345 PF04616 Glycosyl hydrolases family 43 ATY48_22365 PF00072 Response regulator receiver domain ATY48_22365 PF00196 Bacterial regulatory proteins, luxR family ATY48_22370 PF00501 AMP-binding enzyme ATY48_22370 PF13193 AMP-binding enzyme C-terminal domain ATY48_22370 PF16177 ATY48_22370 ATY48_22385 PF04341 ATY48_22385 ATY48_22390 PF00474 Sodium:solute symporter family ATY48_22395 PF00480 ROK family ATY48_22400 PF03372 Endonuclease/Exonuclease/phosphatase family ATY48_22405 PF04828 Glutathione-dependent formaldehyde-activating enzyme ATY48_22410 PF04226 ATY48_22410 ATY48_22415 PF01648 4'-phosphopantetheinyl transferase superfamily ATY48_22420 PF09423 PhoD-like phosphatase ATY48_22420 PF16655 ATY48_22420 ATY48_22425 PF09423 PhoD-like phosphatase ATY48_22425 PF16655 ATY48_22425 ATY48_22430 PF02527 rRNA small subunit methyltransferase G ATY48_22440 PF00830 Ribosomal L28 family ATY48_22445 PF00471 Ribosomal protein L33 ATY48_22455 PF01610 ATY48_22455 ATY48_22455 PF13542 ATY48_22455 ATY48_22465 PF04303 PrpF protein ATY48_22470 PF03737 Demethylmenaquinone methyltransferase ATY48_22475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY48_22475 PF03466 LysR substrate binding domain ATY48_22480 PF13091 PLD-like domain ATY48_22480 PF13396 ATY48_22480 ATY48_22490 PF13454 FAD-NAD(P)-binding ATY48_22495 PF00580 UvrD/REP helicase N-terminal domain ATY48_22495 PF13361 UvrD-like helicase C-terminal domain ATY48_22505 PF12760 Transposase zinc-ribbon domain ATY48_22505 PF12762 ATY48_22505 ATY48_22510 PF13520 Amino acid permease ATY48_22515 PF02646 ATY48_22515 ATY48_22525 PF00255 Glutathione peroxidase ATY48_22530 PF01609 Transposase DDE domain ATY48_22535 PF05598 ATY48_22535 ATY48_22545 PF13546 ATY48_22545 ATY48_22550 PF04055 Radical SAM superfamily ATY48_22560 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ATY48_22565 PF01694 Rhomboid family ATY48_22570 PF08850 ATY48_22570 ATY48_22575 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ATY48_22575 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATY48_22580 PF03572 Peptidase family S41 ATY48_22580 PF13180 PDZ domain ATY48_22585 PF01551 Peptidase family M23 ATY48_22595 PF02225 PA domain ATY48_22595 PF04389 Peptidase family M28 ATY48_22600 PF13670 ATY48_22600 ATY48_22605 PF13546 ATY48_22605 ATY48_22610 PF05598 ATY48_22610 ATY48_22620 PF09983 ATY48_22620 ATY48_22620 PF11795 ATY48_22620 ATY48_22625 PF13555 P-loop containing region of AAA domain ATY48_22625 PF13558 Putative exonuclease SbcCD, C subunit ATY48_22630 PF13835 ATY48_22630 ATY48_22635 PF11855 ATY48_22635 ATY48_22640 PF14103 ATY48_22640 ATY48_22645 PF13304 AAA domain ATY48_22650 PF01227 GTP cyclohydrolase I ATY48_22655 PF12802 MarR family ATY48_22660 PF07869 ATY48_22660 ATY48_22665 PF02321 Outer membrane efflux protein ATY48_22670 PF04632 ATY48_22670 ATY48_22675 PF00083 Sugar (and other) transporter ATY48_22695 PF05016 Plasmid stabilisation system protein ATY48_22705 PF15579 ATY48_22705 ATY48_22710 PF15648 ATY48_22710 ATY48_22720 PF13503 ATY48_22720 ATY48_22725 PF05488 PAAR motif ATY48_22730 PF01609 Transposase DDE domain ATY48_22750 PF02595 Glycerate kinase family ATY48_22755 PF07690 Major Facilitator Superfamily ATY48_22770 PF10672 S-adenosylmethionine-dependent methyltransferase ATY48_22775 PF03741 ATY48_22775 ATY48_22780 PF01694 Rhomboid family ATY48_22785 PF03009 Glycerophosphoryl diester phosphodiesterase family ATY48_22795 PF01569 PAP2 superfamily ATY48_22800 PF01926 50S ribosome-binding GTPase ATY48_22800 PF10396 GTP-binding protein TrmE N-terminus ATY48_22800 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE ATY48_22805 PF00656 Caspase domain ATY48_22805 PF01522 Polysaccharide deacetylase ATY48_22805 PF13432 Tetratricopeptide repeat ATY48_22810 PF02096 60Kd inner membrane protein ATY48_22810 PF14849 YidC periplasmic domain ATY48_22815 PF00825 Ribonuclease P ATY48_22820 PF00468 Ribosomal protein L34