ATY48_00005 SM00382 ATPases associated with a variety of cellular activities ATY48_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain ATY48_00010 SM00480 DNA polymerase III beta subunit ATY48_00020 SM00387 Histidine kinase-like ATPases ATY48_00020 SM00433 TopoisomeraseII ATY48_00035 SM00028 Tetratricopeptide repeats ATY48_00070 SM00155 Phospholipase D. Active site motifs. ATY48_00180 SM01126 ATY48_00180 ATY48_00205 SM00487 DEAD-like helicases superfamily ATY48_00205 SM00490 helicase superfamily c-terminal domain ATY48_00275 SM01126 ATY48_00275 ATY48_00300 SM00642 Alpha-amylase domain ATY48_00310 SM00642 Alpha-amylase domain ATY48_00320 SM00642 Alpha-amylase domain ATY48_00325 SM00642 Alpha-amylase domain ATY48_00335 SM00267 diguanylate cyclase ATY48_00420 SM00382 ATPases associated with a variety of cellular activities ATY48_00525 SM00369 Leucine-rich repeats, typical (most populated) subfamily ATY48_00545 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY48_00640 SM00382 ATPases associated with a variety of cellular activities ATY48_00660 SM01126 ATY48_00660 ATY48_00685 SM00487 DEAD-like helicases superfamily ATY48_00685 SM00490 helicase superfamily c-terminal domain ATY48_00760 SM01126 ATY48_00760 ATY48_00795 SM00354 helix_turn _helix lactose operon repressor ATY48_00815 SM00642 Alpha-amylase domain ATY48_00820 SM00642 Alpha-amylase domain ATY48_00825 SM00642 Alpha-amylase domain ATY48_00875 SM00382 ATPases associated with a variety of cellular activities ATY48_00885 SM00938 Nitrogen regulatory protein P-II ATY48_00950 SM01228 ATY48_00950 ATY48_01015 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY48_01015 SM00388 His Kinase A (phosphoacceptor) domain ATY48_01045 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family ATY48_01065 SM00354 helix_turn _helix lactose operon repressor ATY48_01075 SM00563 Phosphate acyltransferases ATY48_01125 SM00344 helix_turn_helix ASNC type ATY48_01180 SM00829 Enoylreductase ATY48_01240 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY48_01240 SM00091 PAS domain ATY48_01295 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain ATY48_01295 SM01232 ATY48_01295 ATY48_01300 SM01126 ATY48_01300 ATY48_01350 SM00382 ATPases associated with a variety of cellular activities ATY48_01365 SM01126 ATY48_01365 ATY48_01435 SM00564 beta-propeller repeat ATY48_01475 SM00091 PAS domain ATY48_01475 SM00387 Histidine kinase-like ATPases ATY48_01475 SM00388 His Kinase A (phosphoacceptor) domain ATY48_01475 SM00448 cheY-homologous receiver domain ATY48_01485 SM00346 helix_turn_helix isocitrate lyase regulation ATY48_01505 SM01126 ATY48_01505 ATY48_01530 SM00563 Phosphate acyltransferases ATY48_01625 SM01126 ATY48_01625 ATY48_01665 SM00382 ATPases associated with a variety of cellular activities ATY48_01690 SM00530 Helix-turn-helix XRE-family like proteins ATY48_01700 SM00382 ATPases associated with a variety of cellular activities ATY48_01720 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. ATY48_01760 SM01004 Delta-aminolevulinic acid dehydratase ATY48_01775 SM00477 DNA/RNA non-specific endonuclease ATY48_01775 SM00892 DNA/RNA non-specific endonuclease ATY48_01800 SM00491 ATY48_01800 ATY48_01810 SM01126 ATY48_01810 ATY48_01825 SM01060 ATY48_01825 ATY48_01830 SM00248 ankyrin repeats ATY48_01855 SM00448 cheY-homologous receiver domain ATY48_01855 SM00862 Transcriptional regulatory protein, C terminal ATY48_01860 SM00387 Histidine kinase-like ATPases ATY48_01860 SM00388 His Kinase A (phosphoacceptor) domain ATY48_01950 SM00849 Metallo-beta-lactamase superfamily ATY48_01995 SM01060 ATY48_01995 ATY48_02040 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY48_02040 SM00876 Biotin and Thiamin Synthesis associated domain ATY48_02055 SM00822 ATY48_02055 ATY48_02080 SM00825 Beta-ketoacyl synthase ATY48_02090 SM00248 ankyrin repeats ATY48_02095 SM00226 Low molecular weight phosphatase family ATY48_02120 SM00116 Domain in cystathionine beta-synthase and other proteins. ATY48_02120 SM00924 MgtE intracellular N domain ATY48_02130 SM00881 CoA binding domain ATY48_02195 SM00998 Adenylosuccinate lyase C-terminus ATY48_02215 SM00346 helix_turn_helix isocitrate lyase regulation ATY48_02220 SM00090 RIO-like kinase ATY48_02245 SM00836 DALR anticodon binding domain ATY48_02245 SM01016 Arginyl tRNA synthetase N terminal dom ATY48_02275 SM01259 ATY48_02275 ATY48_02295 SM00470 ParB-like nuclease domain ATY48_02380 SM00073 Histidine Phosphotransfer domain ATY48_02380 SM00387 Histidine kinase-like ATPases ATY48_02380 SM00388 His Kinase A (phosphoacceptor) domain ATY48_02380 SM00448 cheY-homologous receiver domain ATY48_02385 SM00052 Putative diguanylate phosphodiesterase ATY48_02385 SM00267 diguanylate cyclase ATY48_02385 SM00448 cheY-homologous receiver domain ATY48_02455 SM00563 Phosphate acyltransferases ATY48_02485 SM01209 ATY48_02485 ATY48_02485 SM01210 ATY48_02485 ATY48_02495 SM00798 AICARFT/IMPCHase bienzyme ATY48_02495 SM00851 MGS-like domain ATY48_02525 SM01126 ATY48_02525 ATY48_02540 SM00530 Helix-turn-helix XRE-family like proteins ATY48_02565 SM00878 Biotin carboxylase C-terminal domain ATY48_02600 SM01126 ATY48_02600 ATY48_02615 SM00487 DEAD-like helicases superfamily ATY48_02615 SM00490 helicase superfamily c-terminal domain ATY48_02675 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain ATY48_02675 SM00437 Bacterial DNA topoisomerase I DNA-binding domain ATY48_02675 SM00493 ATY48_02675 ATY48_02700 SM00257 Lysin motif ATY48_02900 SM01126 ATY48_02900 ATY48_02915 SM00382 ATPases associated with a variety of cellular activities ATY48_02990 SM00382 ATPases associated with a variety of cellular activities ATY48_02990 SM00448 cheY-homologous receiver domain ATY48_03000 SM00448 cheY-homologous receiver domain ATY48_03005 SM00138 Methyltransferase, chemotaxis proteins ATY48_03025 SM00387 Histidine kinase-like ATPases ATY48_03030 SM00448 cheY-homologous receiver domain ATY48_03035 SM00850 LytTr DNA-binding domain ATY48_03095 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY48_03100 SM00986 Uracil DNA glycosylase superfamily ATY48_03100 SM00987 UreE urease accessory protein, C-terminal domain ATY48_03105 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. ATY48_03125 SM00382 ATPases associated with a variety of cellular activities ATY48_03160 SM00387 Histidine kinase-like ATPases ATY48_03160 SM00388 His Kinase A (phosphoacceptor) domain ATY48_03165 SM00448 cheY-homologous receiver domain ATY48_03165 SM00862 Transcriptional regulatory protein, C terminal ATY48_03205 SM00344 helix_turn_helix ASNC type ATY48_03215 SM01005 Alanine racemase, C-terminal domain ATY48_03235 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY48_03235 SM00091 PAS domain ATY48_03235 SM00387 Histidine kinase-like ATPases ATY48_03235 SM00388 His Kinase A (phosphoacceptor) domain ATY48_03235 SM00448 cheY-homologous receiver domain ATY48_03310 SM00382 ATPases associated with a variety of cellular activities ATY48_03310 SM00930 ATY48_03310 ATY48_03335 SM00986 Uracil DNA glycosylase superfamily ATY48_03335 SM00987 UreE urease accessory protein, C-terminal domain ATY48_03405 SM00382 ATPases associated with a variety of cellular activities ATY48_03415 SM00830 Chorismate mutase type II ATY48_03440 SM01126 ATY48_03440 ATY48_03535 SM00825 Beta-ketoacyl synthase ATY48_03560 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY48_03585 SM00487 DEAD-like helicases superfamily ATY48_03585 SM00490 helicase superfamily c-terminal domain ATY48_03620 SM00116 Domain in cystathionine beta-synthase and other proteins. ATY48_03675 SM00382 ATPases associated with a variety of cellular activities ATY48_03685 SM00893 Electron transfer flavoprotein domain ATY48_03690 SM00893 Electron transfer flavoprotein domain ATY48_03725 SM00882 Coenzyme A transferase ATY48_03730 SM00882 Coenzyme A transferase ATY48_03760 SM00382 ATPases associated with a variety of cellular activities ATY48_03775 SM00528 Domain in histone-like proteins of HNS family ATY48_03830 SM00656 ATY48_03830 ATY48_03920 SM01211 ATY48_03920 ATY48_03945 SM00382 ATPases associated with a variety of cellular activities ATY48_04010 SM00345 helix_turn_helix gluconate operon transcriptional repressor ATY48_04010 SM00866 ATY48_04010 ATY48_04075 SM00487 DEAD-like helicases superfamily ATY48_04080 SM01126 ATY48_04080 ATY48_04110 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ATY48_04115 SM00822 ATY48_04115 ATY48_04125 SM00825 Beta-ketoacyl synthase ATY48_04160 SM00382 ATPases associated with a variety of cellular activities ATY48_04245 SM00271 DnaJ molecular chaperone homology domain ATY48_04250 SM00448 cheY-homologous receiver domain ATY48_04255 SM00244 prohibitin homologues ATY48_04260 SM00244 prohibitin homologues ATY48_04270 SM00788 Adenylosuccinate synthetase ATY48_04380 SM01329 ATY48_04380 ATY48_04385 SM00917 LeuA allosteric (dimerisation) domain ATY48_04415 SM00862 Transcriptional regulatory protein, C terminal ATY48_04420 SM00342 helix_turn_helix, arabinose operon control protein ATY48_04450 SM01126 ATY48_04450 ATY48_04460 SM01126 ATY48_04460 ATY48_04485 SM00464 Found in ATP-dependent protease La (LON) ATY48_04520 SM00838 Elongation factor G C-terminus ATY48_04600 SM01126 ATY48_04600 ATY48_04655 SM01126 ATY48_04655 ATY48_04740 SM01126 ATY48_04740 ATY48_04745 SM01329 ATY48_04745 ATY48_04810 SM00382 ATPases associated with a variety of cellular activities ATY48_04810 SM00994 ClpX C4-type zinc finger ATY48_04810 SM01086 C-terminal, D2-small domain, of ClpB protein ATY48_04815 SM00382 ATPases associated with a variety of cellular activities ATY48_04815 SM00464 Found in ATP-dependent protease La (LON) ATY48_04820 SM00411 bacterial (prokaryotic) histone like domain ATY48_04845 SM00257 Lysin motif ATY48_04850 SM00849 Metallo-beta-lactamase superfamily ATY48_04865 SM00479 ATY48_04865 ATY48_04870 SM00331 Sigma factor PP2C-like phosphatases ATY48_04870 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ATY48_04920 SM01126 ATY48_04920 ATY48_04945 SM00849 Metallo-beta-lactamase superfamily ATY48_04950 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY48_04980 SM00382 ATPases associated with a variety of cellular activities ATY48_04990 SM00493 ATY48_04990 ATY48_05005 SM00460 Transglutaminase/protease-like homologues ATY48_05015 SM00382 ATPases associated with a variety of cellular activities ATY48_05090 SM00450 Rhodanese Homology Domain ATY48_05120 SM01154 ATY48_05120 ATY48_05130 SM00642 Alpha-amylase domain ATY48_05145 SM00354 helix_turn _helix lactose operon repressor ATY48_05150 SM00822 ATY48_05150 ATY48_05165 SM00448 cheY-homologous receiver domain ATY48_05165 SM00862 Transcriptional regulatory protein, C terminal ATY48_05170 SM00387 Histidine kinase-like ATPases ATY48_05170 SM00388 His Kinase A (phosphoacceptor) domain ATY48_05180 SM00421 helix_turn_helix, Lux Regulon ATY48_05180 SM00448 cheY-homologous receiver domain ATY48_05220 SM00387 Histidine kinase-like ATPases ATY48_05220 SM00388 His Kinase A (phosphoacceptor) domain ATY48_05220 SM00448 cheY-homologous receiver domain ATY48_05235 SM00919 Malic enzyme, NAD binding domain ATY48_05235 SM01274 ATY48_05235 ATY48_05325 SM01011 Aminopeptidase P, N-terminal domain ATY48_05360 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY48_05385 SM00072 Guanylate kinase homologues. ATY48_05395 SM01409 ATY48_05395 ATY48_05400 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY48_05400 SM00954 Region found in RelA / SpoT proteins ATY48_05410 SM00487 DEAD-like helicases superfamily ATY48_05410 SM00490 helicase superfamily c-terminal domain ATY48_05465 SM00965 Secretin and TonB N terminus short domain ATY48_05505 SM00327 von Willebrand factor (vWF) type A domain ATY48_05510 SM00028 Tetratricopeptide repeats ATY48_05510 SM00327 von Willebrand factor (vWF) type A domain ATY48_05530 SM00861 Transketolase, pyrimidine binding domain ATY48_05590 SM00448 cheY-homologous receiver domain ATY48_05590 SM00862 Transcriptional regulatory protein, C terminal ATY48_05595 SM00387 Histidine kinase-like ATPases ATY48_05595 SM00388 His Kinase A (phosphoacceptor) domain ATY48_05615 SM00382 ATPases associated with a variety of cellular activities ATY48_05630 SM00849 Metallo-beta-lactamase superfamily ATY48_05675 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ATY48_05690 SM01126 ATY48_05690 ATY48_05695 SM00387 Histidine kinase-like ATPases ATY48_05695 SM00388 His Kinase A (phosphoacceptor) domain ATY48_05700 SM00448 cheY-homologous receiver domain ATY48_05700 SM00862 Transcriptional regulatory protein, C terminal ATY48_05980 SM00422 helix_turn_helix, mercury resistance ATY48_06005 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. ATY48_06015 SM00849 Metallo-beta-lactamase superfamily ATY48_06040 SM00421 helix_turn_helix, Lux Regulon ATY48_06075 SM00924 MgtE intracellular N domain ATY48_06120 SM00382 ATPases associated with a variety of cellular activities ATY48_06140 SM00116 Domain in cystathionine beta-synthase and other proteins. ATY48_06280 SM00813 Alpha-L-arabinofuranosidase C-terminus ATY48_06300 SM00382 ATPases associated with a variety of cellular activities ATY48_06300 SM00962 SRP54-type protein, GTPase domain ATY48_06300 SM00963 SRP54-type protein, helical bundle domain ATY48_06345 SM00363 S4 RNA-binding domain ATY48_06370 SM00382 ATPases associated with a variety of cellular activities ATY48_06370 SM01086 C-terminal, D2-small domain, of ClpB protein ATY48_06440 SM00855 Phosphoglycerate mutase family ATY48_06520 SM00382 ATPases associated with a variety of cellular activities ATY48_06560 SM00862 Transcriptional regulatory protein, C terminal ATY48_06565 SM00342 helix_turn_helix, arabinose operon control protein ATY48_06625 SM01126 ATY48_06625 ATY48_06665 SM00382 ATPases associated with a variety of cellular activities ATY48_06680 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain ATY48_06715 SM00411 bacterial (prokaryotic) histone like domain ATY48_06745 SM00382 ATPases associated with a variety of cellular activities ATY48_06785 SM00732 Likely ribonuclease with RNase H fold. ATY48_06860 SM00267 diguanylate cyclase ATY48_06865 SM00829 Enoylreductase ATY48_06880 SM01126 ATY48_06880 ATY48_07000 SM00855 Phosphoglycerate mutase family ATY48_07020 SM00448 cheY-homologous receiver domain ATY48_07025 SM00138 Methyltransferase, chemotaxis proteins ATY48_07030 SM00052 Putative diguanylate phosphodiesterase ATY48_07030 SM00448 cheY-homologous receiver domain ATY48_07035 SM00260 Two component signalling adaptor domain ATY48_07040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY48_07040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY48_07045 SM00073 Histidine Phosphotransfer domain ATY48_07045 SM00260 Two component signalling adaptor domain ATY48_07045 SM00387 Histidine kinase-like ATPases ATY48_07045 SM01231 ATY48_07045 ATY48_07055 SM00487 DEAD-like helicases superfamily ATY48_07055 SM00490 helicase superfamily c-terminal domain ATY48_07055 SM00982 ATY48_07055 ATY48_07055 SM01058 CarD-like/TRCF domain ATY48_07075 SM00387 Histidine kinase-like ATPases ATY48_07075 SM00388 His Kinase A (phosphoacceptor) domain ATY48_07090 SM00645 Papain family cysteine protease ATY48_07110 SM00645 Papain family cysteine protease ATY48_07125 SM00645 Papain family cysteine protease ATY48_07185 SM00357 Cold shock protein domain ATY48_07310 SM00829 Enoylreductase ATY48_07330 SM00342 helix_turn_helix, arabinose operon control protein ATY48_07330 SM00478 endonuclease III ATY48_07330 SM01009 AlkA N-terminal domain ATY48_07375 SM00487 DEAD-like helicases superfamily ATY48_07375 SM00490 helicase superfamily c-terminal domain ATY48_07380 SM00052 Putative diguanylate phosphodiesterase ATY48_07380 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY48_07380 SM00091 PAS domain ATY48_07380 SM00267 diguanylate cyclase ATY48_07385 SM00363 S4 RNA-binding domain ATY48_07415 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY48_07415 SM00387 Histidine kinase-like ATPases ATY48_07415 SM00388 His Kinase A (phosphoacceptor) domain ATY48_07420 SM00448 cheY-homologous receiver domain ATY48_07420 SM00862 Transcriptional regulatory protein, C terminal ATY48_07450 SM00382 ATPases associated with a variety of cellular activities ATY48_07555 SM00382 ATPases associated with a variety of cellular activities ATY48_07555 SM00448 cheY-homologous receiver domain ATY48_07560 SM00387 Histidine kinase-like ATPases ATY48_07560 SM00388 His Kinase A (phosphoacceptor) domain ATY48_07570 SM00881 CoA binding domain ATY48_07740 SM00904 Riboflavin kinase ATY48_07785 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY48_07835 SM00533 DNA-binding domain of DNA mismatch repair MUTS family ATY48_07835 SM00534 ATPase domain of DNA mismatch repair MUTS family ATY48_07860 SM00382 ATPases associated with a variety of cellular activities ATY48_07900 SM00834 Putative regulatory protein ATY48_07935 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ATY48_07945 SM00382 ATPases associated with a variety of cellular activities ATY48_08055 SM00448 cheY-homologous receiver domain ATY48_08065 SM00341 Helicase and RNase D C-terminal ATY48_08065 SM00487 DEAD-like helicases superfamily ATY48_08065 SM00490 helicase superfamily c-terminal domain ATY48_08065 SM00956 ATY48_08065 ATY48_08075 SM00382 ATPases associated with a variety of cellular activities ATY48_08075 SM00487 DEAD-like helicases superfamily ATY48_08075 SM00490 helicase superfamily c-terminal domain ATY48_08075 SM00847 Helicase associated domain (HA2) Add an annotation ATY48_08140 SM00954 Region found in RelA / SpoT proteins ATY48_08165 SM00491 ATY48_08165 ATY48_08190 SM00448 cheY-homologous receiver domain ATY48_08195 SM00448 cheY-homologous receiver domain ATY48_08200 SM00260 Two component signalling adaptor domain ATY48_08205 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY48_08210 SM00073 Histidine Phosphotransfer domain ATY48_08210 SM00260 Two component signalling adaptor domain ATY48_08210 SM00387 Histidine kinase-like ATPases ATY48_08210 SM00448 cheY-homologous receiver domain ATY48_08210 SM01231 ATY48_08210 ATY48_08220 SM00260 Two component signalling adaptor domain ATY48_08240 SM00327 von Willebrand factor (vWF) type A domain ATY48_08265 SM00369 Leucine-rich repeats, typical (most populated) subfamily ATY48_08315 SM01149 ATY48_08315 ATY48_08365 SM00382 ATPases associated with a variety of cellular activities ATY48_08370 SM00758 ATY48_08370 ATY48_08370 SM01217 ATY48_08370 ATY48_08385 SM00636 ATY48_08385 ATY48_08390 SM00812 Alpha-L-fucosidase ATY48_08435 SM00244 prohibitin homologues ATY48_08515 SM00116 Domain in cystathionine beta-synthase and other proteins. ATY48_08565 SM00867 YceI-like domain ATY48_08575 SM00867 YceI-like domain ATY48_08580 SM00387 Histidine kinase-like ATPases ATY48_08580 SM00388 His Kinase A (phosphoacceptor) domain ATY48_08580 SM00448 cheY-homologous receiver domain ATY48_08585 SM00387 Histidine kinase-like ATPases ATY48_08585 SM00388 His Kinase A (phosphoacceptor) domain ATY48_08585 SM00448 cheY-homologous receiver domain ATY48_08590 SM00387 Histidine kinase-like ATPases ATY48_08590 SM00388 His Kinase A (phosphoacceptor) domain ATY48_08590 SM00448 cheY-homologous receiver domain ATY48_08610 SM00812 Alpha-L-fucosidase ATY48_08640 SM00530 Helix-turn-helix XRE-family like proteins ATY48_08690 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY48_08695 SM00838 Elongation factor G C-terminus ATY48_08710 SM00358 Double-stranded RNA binding motif ATY48_08710 SM00535 Ribonuclease III family ATY48_08725 SM00448 cheY-homologous receiver domain ATY48_08735 SM01118 ATY48_08735 ATY48_08780 SM00357 Cold shock protein domain ATY48_08805 SM00487 DEAD-like helicases superfamily ATY48_08805 SM00490 helicase superfamily c-terminal domain ATY48_08835 SM00267 diguanylate cyclase ATY48_08855 SM00869 Autotransporter beta-domain ATY48_08860 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ATY48_09200 SM00382 ATPases associated with a variety of cellular activities ATY48_09220 SM00481 DNA polymerase alpha chain like domain ATY48_09255 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY48_09310 SM00972 Spore Coat Protein U domain ATY48_09325 SM00972 Spore Coat Protein U domain ATY48_09335 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY48_09365 SM01172 ATY48_09365 ATY48_09370 SM00710 Parallel beta-helix repeats ATY48_09370 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses ATY48_09395 SM00434 DNA Topoisomerase IV ATY48_09405 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY48_09450 SM01126 ATY48_09450 ATY48_09475 SM00861 Transketolase, pyrimidine binding domain ATY48_09480 SM00507 HNH nucleases ATY48_09550 SM00271 DnaJ molecular chaperone homology domain ATY48_09580 SM00382 ATPases associated with a variety of cellular activities ATY48_09605 SM00861 Transketolase, pyrimidine binding domain ATY48_09615 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. ATY48_09620 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY48_09700 SM00382 ATPases associated with a variety of cellular activities ATY48_09705 SM00345 helix_turn_helix gluconate operon transcriptional repressor ATY48_09725 SM00984 UDP binding domain ATY48_09745 SM00354 helix_turn _helix lactose operon repressor ATY48_09765 SM01018 B12 binding domain ATY48_09775 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ATY48_09800 SM00316 Ribosomal protein S1-like RNA-binding domain ATY48_09800 SM00357 Cold shock protein domain ATY48_09800 SM00955 ATY48_09800 ATY48_09820 SM00967 RNA 2'-O ribose methyltransferase substrate binding ATY48_09840 SM01126 ATY48_09840 ATY48_09895 SM01126 ATY48_09895 ATY48_09925 SM01126 ATY48_09925 ATY48_10080 SM01007 Class II Aldolase and Adducin N-terminal domain ATY48_10175 SM00382 ATPases associated with a variety of cellular activities ATY48_10190 SM01126 ATY48_10190 ATY48_10205 SM00363 S4 RNA-binding domain ATY48_10230 SM00354 helix_turn _helix lactose operon repressor ATY48_10305 SM00316 Ribosomal protein S1-like RNA-binding domain ATY48_10310 SM00411 bacterial (prokaryotic) histone like domain ATY48_10330 SM00822 ATY48_10330 ATY48_10380 SM00116 Domain in cystathionine beta-synthase and other proteins. ATY48_10380 SM01240 ATY48_10380 ATY48_10435 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY48_10445 SM00529 Helix-turn-helix diphteria tox regulatory element ATY48_10455 SM00479 ATY48_10455 ATY48_10540 SM00316 Ribosomal protein S1-like RNA-binding domain ATY48_10540 SM00732 Likely ribonuclease with RNase H fold. ATY48_10550 SM00448 cheY-homologous receiver domain ATY48_10555 SM00387 Histidine kinase-like ATPases ATY48_10565 SM00014 Acid phosphatase homologues ATY48_10970 SM01126 ATY48_10970 ATY48_11015 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ATY48_11015 SM00465 GIY-YIG type nucleases (URI domain) ATY48_11025 SM00226 Low molecular weight phosphatase family ATY48_11040 SM00382 ATPases associated with a variety of cellular activities ATY48_11055 SM00849 Metallo-beta-lactamase superfamily ATY48_11060 SM01126 ATY48_11060 ATY48_11070 SM00382 ATPases associated with a variety of cellular activities ATY48_11120 SM00382 ATPases associated with a variety of cellular activities ATY48_11175 SM00448 cheY-homologous receiver domain ATY48_11180 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY48_11180 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY48_11180 SM00091 PAS domain ATY48_11180 SM00387 Histidine kinase-like ATPases ATY48_11180 SM00388 His Kinase A (phosphoacceptor) domain ATY48_11180 SM00448 cheY-homologous receiver domain ATY48_11210 SM00267 diguanylate cyclase ATY48_11255 SM00382 ATPases associated with a variety of cellular activities ATY48_11300 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY48_11330 SM00631 ATY48_11330 ATY48_11335 SM01217 ATY48_11335 ATY48_11350 SM00052 Putative diguanylate phosphodiesterase ATY48_11350 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY48_11350 SM00267 diguanylate cyclase ATY48_11420 SM00646 ATY48_11420 ATY48_11445 SM00869 Autotransporter beta-domain ATY48_11465 SM00387 Histidine kinase-like ATPases ATY48_11465 SM00388 His Kinase A (phosphoacceptor) domain ATY48_11470 SM00421 helix_turn_helix, Lux Regulon ATY48_11470 SM00448 cheY-homologous receiver domain ATY48_11475 SM00869 Autotransporter beta-domain ATY48_11495 SM00830 Chorismate mutase type II ATY48_11520 SM00240 Forkhead associated domain ATY48_11540 SM00345 helix_turn_helix gluconate operon transcriptional repressor ATY48_11540 SM00866 ATY48_11540 ATY48_11590 SM00434 DNA Topoisomerase IV ATY48_11610 SM00292 breast cancer carboxy-terminal domain ATY48_11610 SM00532 Ligase N family ATY48_11620 SM00771 ZipA, C-terminal domain (FtsZ-binding) ATY48_11625 SM00968 SMC proteins Flexible Hinge Domain ATY48_11680 SM00947 Carbonic anhydrase ATY48_11705 SM00479 ATY48_11705 ATY48_11735 SM00981 ATY48_11735 ATY48_11755 SM00382 ATPases associated with a variety of cellular activities ATY48_11775 SM00644 ATY48_11775 ATY48_11785 SM00450 Rhodanese Homology Domain ATY48_11810 SM00478 endonuclease III ATY48_11820 SM00947 Carbonic anhydrase ATY48_11875 SM00382 ATPases associated with a variety of cellular activities ATY48_11890 SM00479 ATY48_11890 ATY48_11945 SM01323 ATY48_11945 ATY48_11960 SM00344 helix_turn_helix ASNC type ATY48_12070 SM00387 Histidine kinase-like ATPases ATY48_12090 SM00450 Rhodanese Homology Domain ATY48_12100 SM01126 ATY48_12100 ATY48_12160 SM00852 Probable molybdopterin binding domain ATY48_12165 SM00382 ATPases associated with a variety of cellular activities ATY48_12170 SM00564 beta-propeller repeat ATY48_12185 SM00028 Tetratricopeptide repeats ATY48_12195 SM00562 ATY48_12195 ATY48_12235 SM00382 ATPases associated with a variety of cellular activities ATY48_12255 SM00382 ATPases associated with a variety of cellular activities ATY48_12255 SM00843 ATY48_12255 ATY48_12285 SM00316 Ribosomal protein S1-like RNA-binding domain ATY48_12290 SM00382 ATPases associated with a variety of cellular activities ATY48_12290 SM01086 C-terminal, D2-small domain, of ClpB protein ATY48_12315 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY48_12330 SM00052 Putative diguanylate phosphodiesterase ATY48_12330 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY48_12330 SM00091 PAS domain ATY48_12330 SM00267 diguanylate cyclase ATY48_12335 SM00091 PAS domain ATY48_12335 SM00387 Histidine kinase-like ATPases ATY48_12340 SM00052 Putative diguanylate phosphodiesterase ATY48_12340 SM00267 diguanylate cyclase ATY48_12340 SM00448 cheY-homologous receiver domain ATY48_12345 SM00387 Histidine kinase-like ATPases ATY48_12360 SM00858 ATY48_12360 ATY48_12365 SM00260 Two component signalling adaptor domain ATY48_12365 SM00448 cheY-homologous receiver domain ATY48_12410 SM00047 Lysozyme subfamily 2 ATY48_12450 SM00421 helix_turn_helix, Lux Regulon ATY48_12450 SM00448 cheY-homologous receiver domain ATY48_12460 SM00448 cheY-homologous receiver domain ATY48_12465 SM00382 ATPases associated with a variety of cellular activities ATY48_12485 SM00822 ATY48_12485 ATY48_12490 SM00822 ATY48_12490 ATY48_12540 SM00382 ATPases associated with a variety of cellular activities ATY48_12590 SM00267 diguanylate cyclase ATY48_12595 SM00267 diguanylate cyclase ATY48_12600 SM00052 Putative diguanylate phosphodiesterase ATY48_12600 SM00267 diguanylate cyclase ATY48_12615 SM00382 ATPases associated with a variety of cellular activities ATY48_12615 SM00962 SRP54-type protein, GTPase domain ATY48_12630 SM00448 cheY-homologous receiver domain ATY48_12640 SM00073 Histidine Phosphotransfer domain ATY48_12640 SM00260 Two component signalling adaptor domain ATY48_12640 SM00387 Histidine kinase-like ATPases ATY48_12640 SM01231 ATY48_12640 ATY48_12730 SM01126 ATY48_12730 ATY48_12805 SM01126 ATY48_12805 ATY48_12815 SM00382 ATPases associated with a variety of cellular activities ATY48_12820 SM00382 ATPases associated with a variety of cellular activities ATY48_12865 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ATY48_12875 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase ATY48_12895 SM00859 Semialdehyde dehydrogenase, NAD binding domain ATY48_12935 SM00840 ATY48_12935 ATY48_12950 SM00245 tail specific protease ATY48_12965 SM01234 ATY48_12965 ATY48_13070 SM00841 Elongation factor P, C-terminal ATY48_13070 SM01185 ATY48_13070 ATY48_13080 SM00052 Putative diguanylate phosphodiesterase ATY48_13080 SM00267 diguanylate cyclase ATY48_13080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY48_13120 SM00382 ATPases associated with a variety of cellular activities ATY48_13125 SM00382 ATPases associated with a variety of cellular activities ATY48_13125 SM00487 DEAD-like helicases superfamily ATY48_13125 SM00490 helicase superfamily c-terminal domain ATY48_13150 SM00357 Cold shock protein domain ATY48_13160 SM01322 ATY48_13160 ATY48_13170 SM00052 Putative diguanylate phosphodiesterase ATY48_13170 SM00267 diguanylate cyclase ATY48_13185 SM00822 ATY48_13185 ATY48_13205 SM00853 MutL C terminal dimerisation domain ATY48_13205 SM01340 ATY48_13205 ATY48_13210 SM00646 ATY48_13210 ATY48_13260 SM00474 3'-5' exonuclease ATY48_13275 SM00528 Domain in histone-like proteins of HNS family ATY48_13310 SM01126 ATY48_13310 ATY48_13380 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY48_13405 SM00116 Domain in cystathionine beta-synthase and other proteins. ATY48_13405 SM01091 Transporter associated domain ATY48_13465 SM01230 ATY48_13465 ATY48_13475 SM01230 ATY48_13475 ATY48_13485 SM00267 diguanylate cyclase ATY48_13485 SM00448 cheY-homologous receiver domain ATY48_13540 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY48_13540 SM00091 PAS domain ATY48_13540 SM00387 Histidine kinase-like ATPases ATY48_13540 SM00388 His Kinase A (phosphoacceptor) domain ATY48_13540 SM00448 cheY-homologous receiver domain ATY48_13540 SM01079 ATY48_13540 ATY48_13545 SM00448 cheY-homologous receiver domain ATY48_13545 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY48_13580 SM01126 ATY48_13580 ATY48_13590 SM00354 helix_turn _helix lactose operon repressor ATY48_13845 SM00260 Two component signalling adaptor domain ATY48_13855 SM00448 cheY-homologous receiver domain ATY48_13860 SM00073 Histidine Phosphotransfer domain ATY48_13860 SM00260 Two component signalling adaptor domain ATY48_13860 SM00387 Histidine kinase-like ATPases ATY48_13860 SM01231 ATY48_13860 ATY48_13885 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY48_13890 SM01126 ATY48_13890 ATY48_13895 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY48_13895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY48_13900 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY48_13900 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY48_13905 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY48_13905 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY48_13910 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY48_13910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY48_13915 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY48_13915 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY48_13925 SM00260 Two component signalling adaptor domain ATY48_13945 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY48_13945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY48_13950 SM00138 Methyltransferase, chemotaxis proteins ATY48_13960 SM00448 cheY-homologous receiver domain ATY48_13965 SM00052 Putative diguanylate phosphodiesterase ATY48_13965 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY48_13965 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY48_13965 SM00091 PAS domain ATY48_13965 SM00267 diguanylate cyclase ATY48_13985 SM00966 SpoVT / AbrB like domain ATY48_14010 SM00073 Histidine Phosphotransfer domain ATY48_14010 SM00387 Histidine kinase-like ATPases ATY48_14010 SM00388 His Kinase A (phosphoacceptor) domain ATY48_14010 SM00448 cheY-homologous receiver domain ATY48_14020 SM00448 cheY-homologous receiver domain ATY48_14020 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY48_14030 SM00937 ATY48_14030 ATY48_14035 SM00850 LytTr DNA-binding domain ATY48_14075 SM00851 MGS-like domain ATY48_14075 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ATY48_14085 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain ATY48_14140 SM00899 ATY48_14140 ATY48_14160 SM00822 ATY48_14160 ATY48_14165 SM00841 Elongation factor P, C-terminal ATY48_14165 SM01185 ATY48_14165 ATY48_14215 SM00758 ATY48_14215 ATY48_14235 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ATY48_14260 SM01130 ATY48_14260 ATY48_14280 SM00670 Large family of predicted nucleotide-binding domains ATY48_14375 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ATY48_14385 SM00382 ATPases associated with a variety of cellular activities ATY48_14425 SM00382 ATPases associated with a variety of cellular activities ATY48_14435 SM01103 ATY48_14435 ATY48_14445 SM00257 Lysin motif ATY48_14465 SM00463 Small MutS-related domain ATY48_14490 SM01192 ATY48_14490 ATY48_14490 SM01193 ATY48_14490 ATY48_14515 SM00387 Histidine kinase-like ATPases ATY48_14515 SM00433 TopoisomeraseII ATY48_14550 SM01091 Transporter associated domain ATY48_14575 SM00382 ATPases associated with a variety of cellular activities ATY48_14585 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY48_14840 SM00448 cheY-homologous receiver domain ATY48_14840 SM00862 Transcriptional regulatory protein, C terminal ATY48_14850 SM00387 Histidine kinase-like ATPases ATY48_14890 SM00331 Sigma factor PP2C-like phosphatases ATY48_14890 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ATY48_14915 SM00240 Forkhead associated domain ATY48_14945 SM00382 ATPases associated with a variety of cellular activities ATY48_14945 SM01086 C-terminal, D2-small domain, of ClpB protein ATY48_15070 SM00363 S4 RNA-binding domain ATY48_15075 SM00316 Ribosomal protein S1-like RNA-binding domain ATY48_15090 SM00421 helix_turn_helix, Lux Regulon ATY48_15090 SM00448 cheY-homologous receiver domain ATY48_15095 SM00450 Rhodanese Homology Domain ATY48_15120 SM00984 UDP binding domain ATY48_15170 SM01126 ATY48_15170 ATY48_15180 SM01126 ATY48_15180 ATY48_15190 SM01012 ATY48_15190 ATY48_15240 SM01126 ATY48_15240 ATY48_15250 SM01126 ATY48_15250 ATY48_15260 SM01012 ATY48_15260 ATY48_15300 SM00852 Probable molybdopterin binding domain ATY48_15400 SM00944 Pro-kumamolisin, activation domain ATY48_15460 SM01130 ATY48_15460 ATY48_15485 SM00342 helix_turn_helix, arabinose operon control protein ATY48_15490 SM00382 ATPases associated with a variety of cellular activities ATY48_15490 SM00962 SRP54-type protein, GTPase domain ATY48_15490 SM00963 SRP54-type protein, helical bundle domain ATY48_15500 SM00478 endonuclease III ATY48_15510 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY48_15510 SM00091 PAS domain ATY48_15510 SM00387 Histidine kinase-like ATPases ATY48_15510 SM00388 His Kinase A (phosphoacceptor) domain ATY48_15510 SM00448 cheY-homologous receiver domain ATY48_15540 SM01126 ATY48_15540 ATY48_15685 SM00422 helix_turn_helix, mercury resistance ATY48_15690 SM00411 bacterial (prokaryotic) histone like domain ATY48_15695 SM00873 B3/4 domain ATY48_15695 SM00874 tRNA synthetase B5 domain ATY48_15695 SM00896 Ferredoxin-fold anticodon binding domain ATY48_15720 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ATY48_15750 SM00487 DEAD-like helicases superfamily ATY48_15750 SM00490 helicase superfamily c-terminal domain ATY48_15830 SM01001 AIR carboxylase ATY48_15850 SM00316 Ribosomal protein S1-like RNA-binding domain ATY48_15850 SM00322 K homology RNA-binding domain ATY48_15855 SM01387 ATY48_15855 ATY48_15875 SM00316 Ribosomal protein S1-like RNA-binding domain ATY48_15875 SM00322 K homology RNA-binding domain ATY48_15925 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ATY48_15930 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ATY48_15975 SM00822 ATY48_15975 ATY48_16005 SM00052 Putative diguanylate phosphodiesterase ATY48_16005 SM00267 diguanylate cyclase ATY48_16005 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY48_16070 SM00859 Semialdehyde dehydrogenase, NAD binding domain ATY48_16100 SM00257 Lysin motif ATY48_16130 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY48_16170 SM01160 ATY48_16170 ATY48_16180 SM01126 ATY48_16180 ATY48_16230 SM00098 Alkaline phosphatase homologues ATY48_16235 SM00977 TilS substrate C-terminal domain ATY48_16290 SM00316 Ribosomal protein S1-like RNA-binding domain ATY48_16380 SM01126 ATY48_16380 ATY48_16430 SM01126 ATY48_16430 ATY48_16445 SM00642 Alpha-amylase domain ATY48_16465 SM01126 ATY48_16465 ATY48_16495 SM00528 Domain in histone-like proteins of HNS family ATY48_16525 SM01126 ATY48_16525 ATY48_16535 SM00869 Autotransporter beta-domain ATY48_16610 SM01126 ATY48_16610 ATY48_16620 SM00967 RNA 2'-O ribose methyltransferase substrate binding ATY48_16640 SM01126 ATY48_16640 ATY48_16705 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY48_16705 SM00387 Histidine kinase-like ATPases ATY48_16740 SM00506 Appr-1"-p processing enzyme ATY48_16790 SM01060 ATY48_16790 ATY48_16810 SM01126 ATY48_16810 ATY48_16825 SM00091 PAS domain ATY48_16825 SM00342 helix_turn_helix, arabinose operon control protein ATY48_16895 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY48_16900 SM00481 DNA polymerase alpha chain like domain ATY48_16920 SM00966 SpoVT / AbrB like domain ATY48_16945 SM00855 Phosphoglycerate mutase family ATY48_16975 SM00220 Serine/Threonine protein kinases, catalytic domain ATY48_16985 SM00487 DEAD-like helicases superfamily ATY48_17040 SM00487 DEAD-like helicases superfamily ATY48_17040 SM00490 helicase superfamily c-terminal domain ATY48_17130 SM00382 ATPases associated with a variety of cellular activities ATY48_17130 SM01086 C-terminal, D2-small domain, of ClpB protein ATY48_17375 SM00478 endonuclease III ATY48_17390 SM00421 helix_turn_helix, Lux Regulon ATY48_17390 SM00448 cheY-homologous receiver domain ATY48_17425 SM00387 Histidine kinase-like ATPases ATY48_17425 SM00388 His Kinase A (phosphoacceptor) domain ATY48_17430 SM00448 cheY-homologous receiver domain ATY48_17430 SM00862 Transcriptional regulatory protein, C terminal ATY48_17465 SM00382 ATPases associated with a variety of cellular activities ATY48_17495 SM00990 ATY48_17495 ATY48_17550 SM00662 RNA polymerases D ATY48_17555 SM00363 S4 RNA-binding domain ATY48_17555 SM01390 ATY48_17555 ATY48_17615 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ATY48_17620 SM01374 ATY48_17620 ATY48_17640 SM00322 K homology RNA-binding domain ATY48_17655 SM01382 ATY48_17655 ATY48_17655 SM01383 ATY48_17655 ATY48_17675 SM01403 ATY48_17675 ATY48_17690 SM00838 Elongation factor G C-terminus ATY48_17690 SM00889 Elongation factor G, domain IV ATY48_17705 SM00663 RNA polymerase I subunit A N-terminus ATY48_17730 SM00649 Ribosomal protein L11/L12 ATY48_17735 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. ATY48_17735 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ATY48_17785 SM01400 ATY48_17785 ATY48_17805 SM00028 Tetratricopeptide repeats ATY48_17815 SM00937 ATY48_17815 ATY48_17820 SM00028 Tetratricopeptide repeats ATY48_17825 SM00852 Probable molybdopterin binding domain ATY48_17940 SM01002 Alanine dehydrogenase/PNT, C-terminal domain ATY48_17940 SM01003 Alanine dehydrogenase/PNT, N-terminal domain ATY48_17955 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ATY48_17955 SM00475 5'-3' exonuclease ATY48_18030 SM01126 ATY48_18030 ATY48_18090 SM00448 cheY-homologous receiver domain ATY48_18090 SM00862 Transcriptional regulatory protein, C terminal ATY48_18095 SM00387 Histidine kinase-like ATPases ATY48_18095 SM00388 His Kinase A (phosphoacceptor) domain ATY48_18115 SM00014 Acid phosphatase homologues ATY48_18155 SM00855 Phosphoglycerate mutase family ATY48_18175 SM00829 Enoylreductase ATY48_18185 SM00382 ATPases associated with a variety of cellular activities ATY48_18230 SM00829 Enoylreductase ATY48_18275 SM00387 Histidine kinase-like ATPases ATY48_18275 SM00448 cheY-homologous receiver domain ATY48_18280 SM00448 cheY-homologous receiver domain ATY48_18385 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY48_18430 SM01126 ATY48_18430 ATY48_18485 SM00650 Ribosomal RNA adenine dimethylases ATY48_18545 SM00387 Histidine kinase-like ATPases ATY48_18545 SM00388 His Kinase A (phosphoacceptor) domain ATY48_18550 SM00448 cheY-homologous receiver domain ATY48_18550 SM00862 Transcriptional regulatory protein, C terminal ATY48_18560 SM00382 ATPases associated with a variety of cellular activities ATY48_18580 SM00382 ATPases associated with a variety of cellular activities ATY48_18700 SM00996 S-adenosyl-L-homocysteine hydrolase ATY48_18700 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ATY48_18755 SM00829 Enoylreductase ATY48_18790 SM00957 SecA DEAD-like domain ATY48_18790 SM00958 SecA preprotein cross-linking domain ATY48_18810 SM00864 Tubulin/FtsZ family, GTPase domain ATY48_18810 SM00865 Tubulin/FtsZ family, C-terminal domain ATY48_18815 SM00842 Cell division protein FtsA ATY48_18915 SM00448 cheY-homologous receiver domain ATY48_18915 SM00862 Transcriptional regulatory protein, C terminal ATY48_18920 SM00387 Histidine kinase-like ATPases ATY48_18920 SM00388 His Kinase A (phosphoacceptor) domain ATY48_19030 SM00382 ATPases associated with a variety of cellular activities ATY48_19060 SM00829 Enoylreductase ATY48_19075 SM00448 cheY-homologous receiver domain ATY48_19075 SM00862 Transcriptional regulatory protein, C terminal ATY48_19080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY48_19080 SM00387 Histidine kinase-like ATPases ATY48_19080 SM00388 His Kinase A (phosphoacceptor) domain ATY48_19225 SM01126 ATY48_19225 ATY48_19255 SM01126 ATY48_19255 ATY48_19295 SM00354 helix_turn _helix lactose operon repressor ATY48_19305 SM00345 helix_turn_helix gluconate operon transcriptional repressor ATY48_19305 SM00866 ATY48_19305 ATY48_19360 SM00387 Histidine kinase-like ATPases ATY48_19360 SM00388 His Kinase A (phosphoacceptor) domain ATY48_19360 SM00448 cheY-homologous receiver domain ATY48_19365 SM00448 cheY-homologous receiver domain ATY48_19370 SM00387 Histidine kinase-like ATPases ATY48_19370 SM00388 His Kinase A (phosphoacceptor) domain ATY48_19375 SM00749 bacterial OsmY and nodulation domain ATY48_19385 SM01350 ATY48_19385 ATY48_19445 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY48_19445 SM00245 tail specific protease ATY48_19460 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY48_19480 SM00936 Penicillin-binding protein 5, C-terminal domain ATY48_19550 SM00268 Actin ATY48_19605 SM00267 diguanylate cyclase ATY48_19610 SM01263 ATY48_19610 ATY48_19625 SM00382 ATPases associated with a variety of cellular activities ATY48_19625 SM01086 C-terminal, D2-small domain, of ClpB protein ATY48_19705 SM00448 cheY-homologous receiver domain ATY48_19705 SM00850 LytTr DNA-binding domain ATY48_19740 SM00267 diguanylate cyclase ATY48_19755 SM00637 ATY48_19755 ATY48_19770 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY48_19770 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY48_19770 SM00091 PAS domain ATY48_19770 SM00267 diguanylate cyclase ATY48_19780 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY48_19845 SM00060 Fibronectin type 3 domain ATY48_19945 SM00046 Diacylglycerol kinase catalytic domain (presumed) ATY48_19960 SM00271 DnaJ molecular chaperone homology domain ATY48_20050 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY48_20085 SM01126 ATY48_20085 ATY48_20200 SM00644 ATY48_20200 ATY48_20210 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ATY48_20230 SM01126 ATY48_20230 ATY48_20300 SM01126 ATY48_20300 ATY48_20310 SM01126 ATY48_20310 ATY48_20320 SM01217 ATY48_20320 ATY48_20325 SM00905 Dihydroneopterin aldolase ATY48_20350 SM00400 zinc finger ATY48_20350 SM00493 ATY48_20350 ATY48_20350 SM00766 DNA primase DnaG DnaB-binding ATY48_20445 SM01126 ATY48_20445 ATY48_20500 SM00100 Cyclic nucleotide-monophosphate binding domain ATY48_20500 SM00419 helix_turn_helix, cAMP Regulatory protein ATY48_20520 SM00903 Flavin reductase like domain ATY48_20650 SM01150 ATY48_20650 ATY48_20660 SM01126 ATY48_20660 ATY48_20665 SM01126 ATY48_20665 ATY48_20680 SM00450 Rhodanese Homology Domain ATY48_20705 SM00387 Histidine kinase-like ATPases ATY48_20705 SM00388 His Kinase A (phosphoacceptor) domain ATY48_20710 SM00382 ATPases associated with a variety of cellular activities ATY48_20710 SM00448 cheY-homologous receiver domain ATY48_20790 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY48_20795 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY48_20810 SM01126 ATY48_20810 ATY48_20880 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ATY48_20880 SM00474 3'-5' exonuclease ATY48_20880 SM00475 5'-3' exonuclease ATY48_20880 SM00482 DNA polymerase A domain ATY48_20965 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY48_20965 SM00331 Sigma factor PP2C-like phosphatases ATY48_20980 SM00867 YceI-like domain ATY48_21015 SM00944 Pro-kumamolisin, activation domain ATY48_21060 SM01126 ATY48_21060 ATY48_21105 SM00883 Chaperonin 10 Kd subunit ATY48_21150 SM00986 Uracil DNA glycosylase superfamily ATY48_21150 SM00987 UreE urease accessory protein, C-terminal domain ATY48_21155 SM00448 cheY-homologous receiver domain ATY48_21165 SM00382 ATPases associated with a variety of cellular activities ATY48_21170 SM00487 DEAD-like helicases superfamily ATY48_21170 SM00490 helicase superfamily c-terminal domain ATY48_21180 SM00357 Cold shock protein domain ATY48_21180 SM00382 ATPases associated with a variety of cellular activities ATY48_21180 SM00959 Rho termination factor, N-terminal domain ATY48_21240 SM00563 Phosphate acyltransferases ATY48_21355 SM00388 His Kinase A (phosphoacceptor) domain ATY48_21360 SM00387 Histidine kinase-like ATPases ATY48_21365 SM00448 cheY-homologous receiver domain ATY48_21365 SM00862 Transcriptional regulatory protein, C terminal ATY48_21435 SM01126 ATY48_21435 ATY48_21530 SM00878 Biotin carboxylase C-terminal domain ATY48_21600 SM00833 Cobalamin synthesis protein cobW C-terminal domain ATY48_21645 SM00836 DALR anticodon binding domain ATY48_21655 SM00382 ATPases associated with a variety of cellular activities ATY48_21735 SM00354 helix_turn _helix lactose operon repressor ATY48_21750 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ATY48_21760 SM00758 ATY48_21760 ATY48_21760 SM01217 ATY48_21760 ATY48_21790 SM00633 Glycosyl hydrolase family 10 ATY48_21795 SM00633 Glycosyl hydrolase family 10 ATY48_21840 SM01126 ATY48_21840 ATY48_21910 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY48_21950 SM00530 Helix-turn-helix XRE-family like proteins ATY48_22000 SM00530 Helix-turn-helix XRE-family like proteins ATY48_22050 SM01126 ATY48_22050 ATY48_22070 SM00382 ATPases associated with a variety of cellular activities ATY48_22070 SM00448 cheY-homologous receiver domain ATY48_22075 SM00387 Histidine kinase-like ATPases ATY48_22075 SM00388 His Kinase A (phosphoacceptor) domain ATY48_22085 SM00938 Nitrogen regulatory protein P-II ATY48_22090 SM01230 ATY48_22090 ATY48_22115 SM00028 Tetratricopeptide repeats ATY48_22130 SM00563 Phosphate acyltransferases ATY48_22140 SM00155 Phospholipase D. Active site motifs. ATY48_22145 SM00867 YceI-like domain ATY48_22150 SM00855 Phosphoglycerate mutase family ATY48_22175 SM00530 Helix-turn-helix XRE-family like proteins ATY48_22205 SM00382 ATPases associated with a variety of cellular activities ATY48_22220 SM00382 ATPases associated with a variety of cellular activities ATY48_22235 SM01126 ATY48_22235 ATY48_22275 SM00829 Enoylreductase ATY48_22305 SM00487 DEAD-like helicases superfamily ATY48_22305 SM00490 helicase superfamily c-terminal domain ATY48_22305 SM00847 Helicase associated domain (HA2) Add an annotation ATY48_22315 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ATY48_22365 SM00421 helix_turn_helix, Lux Regulon ATY48_22365 SM00448 cheY-homologous receiver domain ATY48_22480 SM00155 Phospholipase D. Active site motifs. ATY48_22505 SM01126 ATY48_22505 ATY48_22550 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY48_22580 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY48_22580 SM00245 tail specific protease ATY48_22655 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY48_22795 SM00014 Acid phosphatase homologues ATY48_22805 SM00028 Tetratricopeptide repeats