locus-tag class description ATY49_00005 PF11638 DnaA N-terminal domain ATY49_00005 PF08299 Bacterial dnaA protein helix-turn-helix ATY49_00005 PF00308 Bacterial dnaA protein ATY49_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ATY49_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ATY49_00010 PF02767 DNA polymerase III beta subunit, central domain ATY49_00015 PF02463 RecF/RecN/SMC N terminal domain ATY49_00020 PF00204 DNA gyrase B ATY49_00020 PF00986 DNA gyrase B subunit, carboxyl terminus ATY49_00020 PF18053 DNA gyrase B subunit insert domain ATY49_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_00020 PF01751 Toprim domain ATY49_00030 PF01435 Peptidase family M48 ATY49_00045 PF01618 MotA/TolQ/ExbB proton channel family ATY49_00050 PF02472 Biopolymer transport protein ExbD/TolR ATY49_00055 PF02472 Biopolymer transport protein ExbD/TolR ATY49_00060 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ATY49_00070 PF13091 PLD-like domain ATY49_00070 PF13396 Phospholipase_D-nuclease N-terminal ATY49_00080 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ATY49_00085 PF00155 Aminotransferase class I and II ATY49_00090 PF07715 TonB-dependent Receptor Plug Domain ATY49_00090 PF00593 TonB dependent receptor ATY49_00100 PF05598 Transposase domain (DUF772) ATY49_00100 PF01609 Transposase DDE domain ATY49_00105 PF01070 FMN-dependent dehydrogenase ATY49_00110 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family ATY49_00125 PF12241 Trans-2-enoyl-CoA reductase catalytic region ATY49_00125 PF07055 Enoyl reductase FAD binding domain ATY49_00125 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ATY49_00130 PF00294 pfkB family carbohydrate kinase ATY49_00145 PF01609 Transposase DDE domain ATY49_00145 PF05598 Transposase domain (DUF772) ATY49_00155 PF00005 ABC transporter ATY49_00165 PF05598 Transposase domain (DUF772) ATY49_00175 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ATY49_00175 PF00364 Biotin-requiring enzyme ATY49_00195 PF05598 Transposase domain (DUF772) ATY49_00195 PF01609 Transposase DDE domain ATY49_00205 PF00270 DEAD/DEAH box helicase ATY49_00205 PF00271 Helicase conserved C-terminal domain ATY49_00215 PF06903 VirK protein ATY49_00240 PF05598 Transposase domain (DUF772) ATY49_00240 PF01609 Transposase DDE domain ATY49_00295 PF03150 Di-haem cytochrome c peroxidase ATY49_00300 PF13460 NAD(P)H-binding ATY49_00305 PF00128 Alpha amylase, catalytic domain ATY49_00305 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ATY49_00315 PF00128 Alpha amylase, catalytic domain ATY49_00320 PF02446 4-alpha-glucanotransferase ATY49_00325 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ATY49_00325 PF00128 Alpha amylase, catalytic domain ATY49_00325 PF11941 Domain of unknown function (DUF3459) ATY49_00330 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ATY49_00330 PF00128 Alpha amylase, catalytic domain ATY49_00330 PF02806 Alpha amylase, C-terminal all-beta domain ATY49_00335 PF00534 Glycosyl transferases group 1 ATY49_00335 PF08323 Starch synthase catalytic domain ATY49_00340 PF00990 Diguanylate cyclase, GGDEF domain ATY49_00340 PF00072 Response regulator receiver domain ATY49_00350 PF05661 Protein of unknown function (DUF808) ATY49_00355 PF03109 ABC1 family ATY49_00365 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_00375 PF00924 Mechanosensitive ion channel ATY49_00375 PF12795 Mechanosensitive ion channel porin domain ATY49_00375 PF12794 Mechanosensitive ion channel inner membrane domain 1 ATY49_00400 PF01464 Transglycosylase SLT domain ATY49_00415 PF01311 Bacterial export proteins, family 1 ATY49_00425 PF18269 T3SS EscN ATPase C-terminal domain ATY49_00425 PF02874 ATP synthase alpha/beta family, beta-barrel domain ATY49_00425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATY49_00440 PF01514 Secretory protein of YscJ/FliF family ATY49_00455 PF01312 FlhB HrpN YscU SpaS Family ATY49_00460 PF00771 FHIPEP family ATY49_00475 PF00813 FliP family ATY49_00480 PF01313 Bacterial export proteins, family 3 ATY49_00530 PF05819 NolX protein ATY49_00555 PF00595 PDZ domain ATY49_00565 PF08521 Two-component sensor kinase N-terminal ATY49_00565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_00565 PF00512 His Kinase A (phospho-acceptor) domain ATY49_00570 PF01370 NAD dependent epimerase/dehydratase family ATY49_00570 PF08338 Domain of unknown function (DUF1731) ATY49_00580 PF05598 Transposase domain (DUF772) ATY49_00580 PF01609 Transposase DDE domain ATY49_00605 PF00665 Integrase core domain ATY49_00605 PF13936 Helix-turn-helix domain ATY49_00620 PF13344 Haloacid dehalogenase-like hydrolase ATY49_00620 PF00293 NUDIX domain ATY49_00645 PF13533 Biotin-lipoyl like ATY49_00650 PF00005 ABC transporter ATY49_00665 PF00665 Integrase core domain ATY49_00665 PF13936 Helix-turn-helix domain ATY49_00675 PF08845 Toxin SymE, type I toxin-antitoxin system ATY49_00690 PF03006 Haemolysin-III related ATY49_00695 PF00270 DEAD/DEAH box helicase ATY49_00695 PF00271 Helicase conserved C-terminal domain ATY49_00695 PF09369 Domain of unknown function (DUF1998) ATY49_00750 PF01645 Conserved region in glutamate synthase ATY49_00750 PF04898 Glutamate synthase central domain ATY49_00750 PF01493 GXGXG motif ATY49_00750 PF00310 Glutamine amidotransferases class-II ATY49_00755 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY49_00755 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ATY49_00775 PF00665 Integrase core domain ATY49_00775 PF13936 Helix-turn-helix domain ATY49_00790 PF05598 Transposase domain (DUF772) ATY49_00795 PF04962 KduI/IolB family ATY49_00800 PF04962 KduI/IolB family ATY49_00805 PF00356 Bacterial regulatory proteins, lacI family ATY49_00825 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ATY49_00825 PF00128 Alpha amylase, catalytic domain ATY49_00825 PF02806 Alpha amylase, C-terminal all-beta domain ATY49_00830 PF16657 Maltogenic Amylase, C-terminal domain ATY49_00830 PF00128 Alpha amylase, catalytic domain ATY49_00835 PF11896 Domain of unknown function (DUF3416) ATY49_00835 PF00128 Alpha amylase, catalytic domain ATY49_00840 PF13276 HTH-like domain ATY49_00840 PF13683 Integrase core domain ATY49_00855 PF00872 Transposase, Mutator family ATY49_00870 PF05598 Transposase domain (DUF772) ATY49_00885 PF13335 Magnesium chelatase, subunit ChlI C-terminal ATY49_00885 PF01078 Magnesium chelatase, subunit ChlI ATY49_00890 PF04380 Membrane fusogenic activity ATY49_00895 PF00543 Nitrogen regulatory protein P-II ATY49_00915 PF17284 Spermidine synthase tetramerisation domain ATY49_00920 PF17810 Arginine decarboxylase helical bundle domain ATY49_00920 PF17944 Arginine decarboxylase C-terminal helical extension ATY49_00920 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ATY49_00975 PF01134 Glucose inhibited division protein A ATY49_00975 PF13932 GidA associated domain ATY49_00985 PF00291 Pyridoxal-phosphate dependent enzyme ATY49_01005 PF13649 Methyltransferase domain ATY49_01015 PF12697 Alpha/beta hydrolase family ATY49_01025 PF13683 Integrase core domain ATY49_01025 PF13276 HTH-like domain ATY49_01035 PF04349 Periplasmic glucan biosynthesis protein, MdoG ATY49_01045 PF00265 Thymidine kinase ATY49_01050 PF13361 UvrD-like helicase C-terminal domain ATY49_01050 PF00580 UvrD/REP helicase N-terminal domain ATY49_01065 PF04337 Protein of unknown function, DUF480 ATY49_01070 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) ATY49_01075 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ATY49_01080 PF04820 Tryptophan halogenase ATY49_01095 PF00356 Bacterial regulatory proteins, lacI family ATY49_01105 PF01553 Acyltransferase ATY49_01125 PF01527 Transposase ATY49_01140 PF00657 GDSL-like Lipase/Acylhydrolase ATY49_01150 PF00351 Biopterin-dependent aromatic amino acid hydroxylase ATY49_01155 PF01037 Lrp/AsnC ligand binding domain ATY49_01165 PF00593 TonB dependent receptor ATY49_01165 PF07715 TonB-dependent Receptor Plug Domain ATY49_01165 PF07660 Secretin and TonB N terminus short domain ATY49_01170 PF00593 TonB dependent receptor ATY49_01170 PF07715 TonB-dependent Receptor Plug Domain ATY49_01180 PF05598 Transposase domain (DUF772) ATY49_01210 PF08240 Alcohol dehydrogenase GroES-like domain ATY49_01210 PF00107 Zinc-binding dehydrogenase ATY49_01215 PF00150 Cellulase (glycosyl hydrolase family 5) ATY49_01220 PF00150 Cellulase (glycosyl hydrolase family 5) ATY49_01225 PF00150 Cellulase (glycosyl hydrolase family 5) ATY49_01230 PF13936 Helix-turn-helix domain ATY49_01230 PF00665 Integrase core domain ATY49_01240 PF02810 SEC-C motif ATY49_01250 PF05598 Transposase domain (DUF772) ATY49_01250 PF01609 Transposase DDE domain ATY49_01255 PF01263 Aldose 1-epimerase ATY49_01260 PF07690 Major Facilitator Superfamily ATY49_01265 PF01126 Heme oxygenase ATY49_01270 PF13426 PAS domain ATY49_01270 PF01590 GAF domain ATY49_01270 PF00360 Phytochrome region ATY49_01270 PF08446 PAS fold ATY49_01275 PF03594 Benzoate membrane transport protein ATY49_01280 PF03594 Benzoate membrane transport protein ATY49_01310 PF13276 HTH-like domain ATY49_01310 PF13683 Integrase core domain ATY49_01315 PF01527 Transposase ATY49_01335 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ATY49_01335 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ATY49_01335 PF06827 Zinc finger found in FPG and IleRS ATY49_01355 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_01375 PF04333 MlaA lipoprotein ATY49_01385 PF05494 MlaC protein ATY49_01390 PF02470 MlaD protein ATY49_01395 PF02405 Permease MlaE ATY49_01400 PF00005 ABC transporter ATY49_01430 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_01460 PF13276 HTH-like domain ATY49_01460 PF13683 Integrase core domain ATY49_01465 PF01527 Transposase ATY49_01485 PF01011 PQQ enzyme repeat ATY49_01485 PF13570 PQQ-like domain ATY49_01485 PF13360 PQQ-like domain ATY49_01490 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_01510 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain ATY49_01510 PF06165 Glycosyltransferase family 36 ATY49_01525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_01525 PF00512 His Kinase A (phospho-acceptor) domain ATY49_01530 PF02659 Putative manganese efflux pump ATY49_01535 PF09339 IclR helix-turn-helix domain ATY49_01535 PF01614 Bacterial transcriptional regulator ATY49_01540 PF07690 Major Facilitator Superfamily ATY49_01545 PF05336 L-rhamnose mutarotase ATY49_01570 PF01432 Peptidase family M3 ATY49_01585 PF00472 RF-1 domain ATY49_01595 PF00849 RNA pseudouridylate synthase ATY49_01605 PF03109 ABC1 family ATY49_01650 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_01655 PF01527 Transposase ATY49_01700 PF08546 Ketopantoate reductase PanE/ApbA C terminal ATY49_01700 PF02558 Ketopantoate reductase PanE/ApbA ATY49_01710 PF01061 ABC-2 type transporter ATY49_01715 PF00005 ABC transporter ATY49_01720 PF01383 CpcD/allophycocyanin linker domain ATY49_01720 PF00175 Oxidoreductase NAD-binding domain ATY49_01725 PF01545 Cation efflux family ATY49_01730 PF02583 Metal-sensitive transcriptional repressor ATY49_01740 PF01381 Helix-turn-helix ATY49_01750 PF00005 ABC transporter ATY49_01765 PF04820 Tryptophan halogenase ATY49_01785 PF02798 Glutathione S-transferase, N-terminal domain ATY49_01785 PF00043 Glutathione S-transferase, C-terminal domain ATY49_01790 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ATY49_01790 PF00326 Prolyl oligopeptidase family ATY49_01810 PF00490 Delta-aminolevulinic acid dehydratase ATY49_01820 PF03466 LysR substrate binding domain ATY49_01820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY49_01830 PF00258 Flavodoxin ATY49_01830 PF00667 FAD binding domain ATY49_01830 PF00175 Oxidoreductase NAD-binding domain ATY49_01840 PF08501 Shikimate dehydrogenase substrate binding domain ATY49_01840 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ATY49_01840 PF01488 Shikimate / quinate 5-dehydrogenase ATY49_01850 PF13307 Helicase C-terminal domain ATY49_01850 PF06733 DEAD_2 ATY49_01870 PF13533 Biotin-lipoyl like ATY49_01875 PF06628 Catalase-related immune-responsive ATY49_01875 PF00199 Catalase ATY49_01895 PF01207 Dihydrouridine synthase (Dus) ATY49_01905 PF00072 Response regulator receiver domain ATY49_01905 PF00486 Transcriptional regulatory protein, C terminal ATY49_01910 PF00672 HAMP domain ATY49_01910 PF00512 His Kinase A (phospho-acceptor) domain ATY49_01910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_01935 PF08279 HTH domain ATY49_01935 PF03099 Biotin/lipoate A/B protein ligase family ATY49_01935 PF02237 Biotin protein ligase C terminal domain ATY49_01940 PF03309 Type III pantothenate kinase ATY49_01955 PF02223 Thymidylate kinase ATY49_01975 PF00491 Arginase family ATY49_01990 PF05532 CsbD-like ATY49_01995 PF00579 tRNA synthetases class I (W and Y) ATY49_02000 PF00753 Metallo-beta-lactamase superfamily ATY49_02025 PF00892 EamA-like transporter family ATY49_02045 PF00199 Catalase ATY49_02050 PF08281 Sigma-70, region 4 ATY49_02050 PF04542 Sigma-70 region 2 ATY49_02060 PF02789 Cytosol aminopeptidase family, N-terminal domain ATY49_02060 PF00883 Cytosol aminopeptidase family, catalytic domain ATY49_02070 PF01594 AI-2E family transporter ATY49_02080 PF01040 UbiA prenyltransferase family ATY49_02090 PF04055 Radical SAM superfamily ATY49_02090 PF06968 Biotin and Thiamin Synthesis associated domain ATY49_02095 PF00155 Aminotransferase class I and II ATY49_02120 PF00535 Glycosyl transferase family 2 ATY49_02130 PF00109 Beta-ketoacyl synthase, N-terminal domain ATY49_02130 PF02801 Beta-ketoacyl synthase, C-terminal domain ATY49_02135 PF05166 YcgL domain ATY49_02150 PF00723 Glycosyl hydrolases family 15 ATY49_02155 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ATY49_02155 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ATY49_02165 PF02254 TrkA-N domain ATY49_02165 PF00999 Sodium/hydrogen exchanger family ATY49_02170 PF00571 CBS domain ATY49_02170 PF03448 MgtE intracellular N domain ATY49_02170 PF01769 Divalent cation transporter ATY49_02180 PF00583 Acetyltransferase (GNAT) family ATY49_02180 PF13380 CoA binding domain ATY49_02180 PF13607 Succinyl-CoA ligase like flavodoxin domain ATY49_02190 PF02867 Ribonucleotide reductase, barrel domain ATY49_02190 PF00317 Ribonucleotide reductase, all-alpha domain ATY49_02190 PF03477 ATP cone domain ATY49_02195 PF00268 Ribonucleotide reductase, small chain ATY49_02215 PF01527 Transposase ATY49_02230 PF02803 Thiolase, C-terminal domain ATY49_02230 PF00108 Thiolase, N-terminal domain ATY49_02235 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal ATY49_02235 PF00775 Dioxygenase ATY49_02245 PF00206 Lyase ATY49_02245 PF10397 Adenylosuccinate lyase C-terminus ATY49_02250 PF12146 Serine aminopeptidase, S33 ATY49_02255 PF02627 Carboxymuconolactone decarboxylase family ATY49_02265 PF01614 Bacterial transcriptional regulator ATY49_02265 PF09339 IclR helix-turn-helix domain ATY49_02275 PF00665 Integrase core domain ATY49_02275 PF13936 Helix-turn-helix domain ATY49_02280 PF00106 short chain dehydrogenase ATY49_02295 PF03485 Arginyl tRNA synthetase N terminal domain ATY49_02295 PF00750 tRNA synthetases class I (R) ATY49_02295 PF05746 DALR anticodon binding domain ATY49_02300 PF04002 RadC-like JAB domain ATY49_02305 PF04127 DNA / pantothenate metabolism flavoprotein ATY49_02305 PF02441 Flavoprotein ATY49_02310 PF00692 dUTPase ATY49_02315 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ATY49_02315 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ATY49_02315 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ATY49_02315 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ATY49_02330 PF00535 Glycosyl transferase family 2 ATY49_02335 PF01370 NAD dependent epimerase/dehydratase family ATY49_02345 PF02195 ParB-like nuclease domain ATY49_02345 PF17762 HTH domain found in ParB protein ATY49_02350 PF13614 AAA domain ATY49_02360 PF00156 Phosphoribosyl transferase domain ATY49_02365 PF03372 Endonuclease/Exonuclease/phosphatase family ATY49_02370 PF07690 Major Facilitator Superfamily ATY49_02380 PF03702 Anhydro-N-acetylmuramic acid kinase ATY49_02385 PF04225 Opacity-associated protein A LysM-like domain ATY49_02385 PF01551 Peptidase family M23 ATY49_02390 PF00579 tRNA synthetases class I (W and Y) ATY49_02425 PF01527 Transposase ATY49_02430 PF00072 Response regulator receiver domain ATY49_02430 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ATY49_02430 PF01627 Hpt domain ATY49_02430 PF00512 His Kinase A (phospho-acceptor) domain ATY49_02430 PF00672 HAMP domain ATY49_02430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_02435 PF00486 Transcriptional regulatory protein, C terminal ATY49_02435 PF00072 Response regulator receiver domain ATY49_02460 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_02470 PF01521 Iron-sulphur cluster biosynthesis ATY49_02480 PF00293 NUDIX domain ATY49_02480 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain ATY49_02480 PF09297 NADH pyrophosphatase zinc ribbon domain ATY49_02485 PF03186 CobD/Cbib protein ATY49_02485 PF17113 Regulatory signalling modulator protein AmpE ATY49_02505 PF07690 Major Facilitator Superfamily ATY49_02520 PF12805 FUSC-like inner membrane protein yccS ATY49_02530 PF12704 MacB-like periplasmic core domain ATY49_02530 PF02687 FtsX-like permease family ATY49_02530 PF00005 ABC transporter ATY49_02535 PF02844 Phosphoribosylglycinamide synthetase, N domain ATY49_02535 PF02843 Phosphoribosylglycinamide synthetase, C domain ATY49_02535 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATY49_02545 PF02142 MGS-like domain ATY49_02545 PF01808 AICARFT/IMPCHase bienzyme ATY49_02555 PF12147 Putative methyltransferase ATY49_02555 PF12146 Serine aminopeptidase, S33 ATY49_02565 PF12147 Putative methyltransferase ATY49_02565 PF12146 Serine aminopeptidase, S33 ATY49_02570 PF00782 Dual specificity phosphatase, catalytic domain ATY49_02580 PF02954 Bacterial regulatory protein, Fis family ATY49_02590 PF01381 Helix-turn-helix ATY49_02615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ATY49_02615 PF00289 Biotin carboxylase, N-terminal domain ATY49_02615 PF02785 Biotin carboxylase C-terminal domain ATY49_02625 PF00364 Biotin-requiring enzyme ATY49_02630 PF01220 Dehydroquinase class II ATY49_02640 PF02683 Cytochrome C biogenesis protein transmembrane region ATY49_02640 PF11412 Disulphide bond corrector protein DsbC ATY49_02645 PF03091 CutA1 divalent ion tolerance protein ATY49_02665 PF00271 Helicase conserved C-terminal domain ATY49_02665 PF17764 3′ DNA-binding domain (3′BD) ATY49_02665 PF00270 DEAD/DEAH box helicase ATY49_02665 PF18074 Primosomal protein N C-terminal domain ATY49_02665 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ATY49_02685 PF01554 MatE ATY49_02690 PF01343 Peptidase family S49 ATY49_02715 PF01300 Telomere recombination ATY49_02720 PF01131 DNA topoisomerase ATY49_02720 PF13368 Topoisomerase C-terminal repeat ATY49_02720 PF01751 Toprim domain ATY49_02730 PF07963 Prokaryotic N-terminal methylation motif ATY49_02730 PF00114 Pilin (bacterial filament) ATY49_02735 PF04361 Protein of unknown function (DUF494) ATY49_02740 PF17782 DprA winged helix domain ATY49_02740 PF02481 DNA recombination-mediator protein A ATY49_02745 PF01476 LysM domain ATY49_02750 PF01327 Polypeptide deformylase ATY49_02755 PF00551 Formyl transferase ATY49_02755 PF02911 Formyl transferase, C-terminal domain ATY49_02760 PF01189 16S rRNA methyltransferase RsmB/F ATY49_02760 PF01029 NusB family ATY49_02775 PF00535 Glycosyl transferase family 2 ATY49_02795 PF00925 GTP cyclohydrolase II ATY49_02805 PF03279 Bacterial lipid A biosynthesis acyltransferase ATY49_02810 PF02580 D-Tyr-tRNA(Tyr) deacylase ATY49_02815 PF04546 Sigma-70, non-essential region ATY49_02815 PF04545 Sigma-70, region 4 ATY49_02815 PF03979 Sigma-70 factor, region 1.1 ATY49_02815 PF04539 Sigma-70 region 3 ATY49_02815 PF04542 Sigma-70 region 2 ATY49_02815 PF00140 Sigma-70 factor, region 1.2 ATY49_02830 PF00589 Phage integrase family ATY49_02850 PF07996 Type IV secretion system proteins ATY49_02865 PF04610 TrbL/VirB6 plasmid conjugal transfer protein ATY49_02880 PF03852 DNA mismatch endonuclease Vsr ATY49_02885 PF00145 C-5 cytosine-specific DNA methylase ATY49_02960 PF00005 ABC transporter ATY49_02975 PF00593 TonB dependent receptor ATY49_02975 PF07715 TonB-dependent Receptor Plug Domain ATY49_03025 PF02322 Cytochrome bd terminal oxidase subunit II ATY49_03030 PF01654 Cytochrome bd terminal oxidase subunit I ATY49_03035 PF00072 Response regulator receiver domain ATY49_03035 PF00158 Sigma-54 interaction domain ATY49_03035 PF02954 Bacterial regulatory protein, Fis family ATY49_03050 PF01339 CheB methylesterase ATY49_03050 PF03705 CheR methyltransferase, all-alpha domain ATY49_03050 PF01739 CheR methyltransferase, SAM binding domain ATY49_03050 PF08448 PAS fold ATY49_03065 PF00672 HAMP domain ATY49_03065 PF06580 Histidine kinase ATY49_03065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_03065 PF02743 Cache domain ATY49_03070 PF00072 Response regulator receiver domain ATY49_03070 PF04397 LytTr DNA-binding domain ATY49_03075 PF04397 LytTr DNA-binding domain ATY49_03075 PF00072 Response regulator receiver domain ATY49_03085 PF13520 Amino acid permease ATY49_03100 PF05649 Peptidase family M13 ATY49_03100 PF01431 Peptidase family M13 ATY49_03115 PF00248 Aldo/keto reductase family ATY49_03120 PF03358 NADPH-dependent FMN reductase ATY49_03130 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ATY49_03140 PF03167 Uracil DNA glycosylase superfamily ATY49_03145 PF02469 Fasciclin domain ATY49_03160 PF00999 Sodium/hydrogen exchanger family ATY49_03165 PF00005 ABC transporter ATY49_03170 PF01061 ABC-2 type transporter ATY49_03190 PF04151 Bacterial pre-peptidase C-terminal domain ATY49_03190 PF00082 Subtilase family ATY49_03200 PF00072 Response regulator receiver domain ATY49_03200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_03200 PF13188 PAS domain ATY49_03200 PF00512 His Kinase A (phospho-acceptor) domain ATY49_03200 PF08448 PAS fold ATY49_03205 PF00486 Transcriptional regulatory protein, C terminal ATY49_03205 PF00072 Response regulator receiver domain ATY49_03220 PF00691 OmpA family ATY49_03220 PF13677 Membrane MotB of proton-channel complex MotA/MotB ATY49_03225 PF01618 MotA/TolQ/ExbB proton channel family ATY49_03235 PF01641 SelR domain ATY49_03245 PF01037 Lrp/AsnC ligand binding domain ATY49_03250 PF01266 FAD dependent oxidoreductase ATY49_03255 PF01168 Alanine racemase, N-terminal domain ATY49_03255 PF00842 Alanine racemase, C-terminal domain ATY49_03275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_03275 PF00512 His Kinase A (phospho-acceptor) domain ATY49_03275 PF00989 PAS fold ATY49_03285 PF07995 Glucose / Sorbosone dehydrogenase ATY49_03300 PF08468 Methyltransferase small domain N-terminal ATY49_03300 PF05175 Methyltransferase small domain ATY49_03305 PF01479 S4 domain ATY49_03305 PF00849 RNA pseudouridylate synthase ATY49_03310 PF13419 Haloacid dehalogenase-like hydrolase ATY49_03340 PF04461 Protein of unknown function (DUF520) ATY49_03345 PF00892 EamA-like transporter family ATY49_03350 PF00005 ABC transporter ATY49_03350 PF09383 NIL domain ATY49_03355 PF00528 Binding-protein-dependent transport system inner membrane component ATY49_03360 PF03180 NLPA lipoprotein ATY49_03385 PF00364 Biotin-requiring enzyme ATY49_03385 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ATY49_03385 PF02817 e3 binding domain ATY49_03395 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY49_03395 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ATY49_03415 PF00119 ATP synthase A chain ATY49_03420 PF00137 ATP synthase subunit C ATY49_03425 PF00430 ATP synthase B/B' CF(0) ATY49_03430 PF00213 ATP synthase delta (OSCP) subunit ATY49_03435 PF02874 ATP synthase alpha/beta family, beta-barrel domain ATY49_03435 PF00306 ATP synthase alpha/beta chain, C terminal domain ATY49_03435 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATY49_03440 PF00231 ATP synthase ATY49_03445 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATY49_03445 PF02874 ATP synthase alpha/beta family, beta-barrel domain ATY49_03450 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ATY49_03455 PF01817 Chorismate mutase type II ATY49_03465 PF12804 MobA-like NTP transferase domain ATY49_03465 PF00132 Bacterial transferase hexapeptide (six repeats) ATY49_03465 PF14602 Hexapeptide repeat of succinyl-transferase ATY49_03470 PF00512 His Kinase A (phospho-acceptor) domain ATY49_03470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_03470 PF08448 PAS fold ATY49_03470 PF13426 PAS domain ATY49_03470 PF00072 Response regulator receiver domain ATY49_03500 PF08402 TOBE domain ATY49_03500 PF00005 ABC transporter ATY49_03505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ATY49_03510 PF01380 SIS domain ATY49_03525 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_03540 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ATY49_03545 PF05275 Copper resistance protein B precursor (CopB) ATY49_03550 PF07731 Multicopper oxidase ATY49_03550 PF07732 Multicopper oxidase ATY49_03550 PF00394 Multicopper oxidase ATY49_03565 PF01432 Peptidase family M3 ATY49_03575 PF00109 Beta-ketoacyl synthase, N-terminal domain ATY49_03575 PF02801 Beta-ketoacyl synthase, C-terminal domain ATY49_03580 PF07977 FabA-like domain ATY49_03585 PF00817 impB/mucB/samB family ATY49_03585 PF11799 impB/mucB/samB family C-terminal domain ATY49_03590 PF13419 Haloacid dehalogenase-like hydrolase ATY49_03600 PF13185 GAF domain ATY49_03615 PF01242 6-pyruvoyl tetrahydropterin synthase ATY49_03625 PF00270 DEAD/DEAH box helicase ATY49_03625 PF00271 Helicase conserved C-terminal domain ATY49_03635 PF13417 Glutathione S-transferase, N-terminal domain ATY49_03640 PF00437 Type II/IV secretion system protein ATY49_03660 PF00571 CBS domain ATY49_03660 PF00291 Pyridoxal-phosphate dependent enzyme ATY49_03665 PF01053 Cys/Met metabolism PLP-dependent enzyme ATY49_03675 PF01370 NAD dependent epimerase/dehydratase family ATY49_03705 PF00872 Transposase, Mutator family ATY49_03715 PF00005 ABC transporter ATY49_03725 PF00766 Electron transfer flavoprotein FAD-binding domain ATY49_03725 PF01012 Electron transfer flavoprotein domain ATY49_03730 PF01012 Electron transfer flavoprotein domain ATY49_03735 PF16363 GDP-mannose 4,6 dehydratase ATY49_03740 PF00483 Nucleotidyl transferase ATY49_03745 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ATY49_03750 PF04321 RmlD substrate binding domain ATY49_03755 PF00483 Nucleotidyl transferase ATY49_03755 PF01050 Mannose-6-phosphate isomerase ATY49_03760 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ATY49_03760 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ATY49_03760 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ATY49_03760 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ATY49_03765 PF01144 Coenzyme A transferase ATY49_03770 PF01144 Coenzyme A transferase ATY49_03775 PF05045 Rhamnan synthesis protein F ATY49_03775 PF14307 Glycosyltransferase WbsX ATY49_03795 PF03886 ABC-type transport auxiliary lipoprotein component ATY49_03795 PF02470 MlaD protein ATY49_03800 PF00005 ABC transporter ATY49_03805 PF02405 Permease MlaE ATY49_03815 PF00816 H-NS histone family ATY49_03820 PF03129 Anticodon binding domain ATY49_03820 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ATY49_03820 PF04073 Aminoacyl-tRNA editing domain ATY49_03830 PF01066 CDP-alcohol phosphatidyltransferase ATY49_03855 PF01609 Transposase DDE domain ATY49_03855 PF05598 Transposase domain (DUF772) ATY49_03865 PF01464 Transglycosylase SLT domain ATY49_03865 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ATY49_03870 PF00544 Pectate lyase ATY49_03895 PF13683 Integrase core domain ATY49_03895 PF13276 HTH-like domain ATY49_03900 PF01527 Transposase ATY49_03910 PF00133 tRNA synthetases class I (I, L, M and V) ATY49_03910 PF08264 Anticodon-binding domain of tRNA ATY49_03910 PF10458 Valyl tRNA synthetase tRNA binding arm ATY49_03925 PF00883 Cytosol aminopeptidase family, catalytic domain ATY49_03925 PF02789 Cytosol aminopeptidase family, N-terminal domain ATY49_03935 PF03739 Lipopolysaccharide export system permease LptF/LptG ATY49_03945 PF02899 Phage integrase, N-terminal SAM-like domain ATY49_03945 PF00589 Phage integrase family ATY49_03950 PF13098 Thioredoxin-like domain ATY49_03950 PF10411 Disulfide bond isomerase protein N-terminus ATY49_03955 PF02769 AIR synthase related protein, C-terminal domain ATY49_03955 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ATY49_03955 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ATY49_03960 PF05662 Coiled stalk of trimeric autotransporter adhesin ATY49_03960 PF03895 YadA-like membrane anchor domain ATY49_03960 PF13018 Extended Signal Peptide of Type V secretion system ATY49_03960 PF05658 Head domain of trimeric autotransporter adhesin ATY49_03980 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ATY49_03980 PF00437 Type II/IV secretion system protein ATY49_03990 PF00482 Type II secretion system (T2SS), protein F ATY49_03995 PF08334 Type II secretion system (T2SS), protein G ATY49_04000 PF12019 Type II transport protein GspH ATY49_04005 PF07963 Prokaryotic N-terminal methylation motif ATY49_04015 PF03934 Type II secretion system (T2SS), protein K ATY49_04020 PF05137 Fimbrial assembly protein (PilN) ATY49_04025 PF10741 Type II secretion system (T2SS), protein M subtype b ATY49_04035 PF00263 Bacterial type II and III secretion system protein ATY49_04035 PF03958 Bacterial type II/III secretion system short domain ATY49_04045 PF00392 Bacterial regulatory proteins, gntR family ATY49_04045 PF07702 UTRA domain ATY49_04055 PF00593 TonB dependent receptor ATY49_04055 PF07715 TonB-dependent Receptor Plug Domain ATY49_04080 PF09827 CRISPR associated protein Cas2 ATY49_04085 PF01867 CRISPR associated protein Cas1 ATY49_04105 PF09704 CRISPR-associated protein (Cas_Cas5) ATY49_04120 PF02545 Maf-like protein ATY49_04125 PF02620 Large ribosomal RNA subunit accumulation protein YceD ATY49_04130 PF01783 Ribosomal L32p protein family ATY49_04135 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ATY49_04135 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ATY49_04145 PF00698 Acyl transferase domain ATY49_04155 PF00550 Phosphopantetheine attachment site ATY49_04160 PF00109 Beta-ketoacyl synthase, N-terminal domain ATY49_04160 PF02801 Beta-ketoacyl synthase, C-terminal domain ATY49_04165 PF04715 Anthranilate synthase component I, N terminal region ATY49_04165 PF00425 chorismate binding enzyme ATY49_04170 PF02618 YceG-like family ATY49_04175 PF09115 DNA polymerase III, delta subunit, C terminal ATY49_04195 PF00158 Sigma-54 interaction domain ATY49_04195 PF06506 Propionate catabolism activator ATY49_04195 PF02954 Bacterial regulatory protein, Fis family ATY49_04205 PF00285 Citrate synthase, C-terminal domain ATY49_04210 PF00330 Aconitase family (aconitate hydratase) ATY49_04210 PF00694 Aconitase C-terminal domain ATY49_04215 PF04303 PrpF protein ATY49_04220 PF01609 Transposase DDE domain ATY49_04220 PF05598 Transposase domain (DUF772) ATY49_04225 PF00593 TonB dependent receptor ATY49_04225 PF07715 TonB-dependent Receptor Plug Domain ATY49_04260 PF13936 Helix-turn-helix domain ATY49_04260 PF00665 Integrase core domain ATY49_04270 PF08534 Redoxin ATY49_04280 PF01556 DnaJ C terminal domain ATY49_04280 PF00226 DnaJ domain ATY49_04285 PF00072 Response regulator receiver domain ATY49_04290 PF12221 Bacterial membrane protein N terminal ATY49_04290 PF01145 SPFH domain / Band 7 family ATY49_04295 PF01145 SPFH domain / Band 7 family ATY49_04305 PF00709 Adenylosuccinate synthetase ATY49_04310 PF01433 Peptidase family M1 domain ATY49_04310 PF11838 ERAP1-like C-terminal domain ATY49_04320 PF05598 Transposase domain (DUF772) ATY49_04335 PF05598 Transposase domain (DUF772) ATY49_04335 PF01609 Transposase DDE domain ATY49_04355 PF03279 Bacterial lipid A biosynthesis acyltransferase ATY49_04360 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ATY49_04365 PF02321 Outer membrane efflux protein ATY49_04395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY49_04400 PF00330 Aconitase family (aconitate hydratase) ATY49_04405 PF00694 Aconitase C-terminal domain ATY49_04415 PF00180 Isocitrate/isopropylmalate dehydrogenase ATY49_04420 PF08502 LeuA allosteric (dimerisation) domain ATY49_04420 PF00682 HMGL-like ATY49_04425 PF00291 Pyridoxal-phosphate dependent enzyme ATY49_04435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ATY49_04435 PF00205 Thiamine pyrophosphate enzyme, central domain ATY49_04435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ATY49_04440 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ATY49_04440 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ATY49_04445 PF01964 Radical SAM ThiC family ATY49_04445 PF13667 ThiC-associated domain ATY49_04450 PF18500 CadC C-terminal domain 1 ATY49_04450 PF00486 Transcriptional regulatory protein, C terminal ATY49_04455 PF12833 Helix-turn-helix domain ATY49_04460 PF07715 TonB-dependent Receptor Plug Domain ATY49_04460 PF00593 TonB dependent receptor ATY49_04470 PF00719 Inorganic pyrophosphatase ATY49_04500 PF00365 Phosphofructokinase ATY49_04510 PF01225 Mur ligase family, catalytic domain ATY49_04510 PF08245 Mur ligase middle domain ATY49_04510 PF02875 Mur ligase family, glutamate ligase domain ATY49_04520 PF01062 Bestrophin, RFP-TM, chloride channel ATY49_04535 PF02798 Glutathione S-transferase, N-terminal domain ATY49_04535 PF00043 Glutathione S-transferase, C-terminal domain ATY49_04540 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ATY49_04540 PF00056 lactate/malate dehydrogenase, NAD binding domain ATY49_04545 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ATY49_04570 PF01474 Class-II DAHP synthetase family ATY49_04580 PF02600 Disulfide bond formation protein DsbB ATY49_04590 PF01527 Transposase ATY49_04595 PF13683 Integrase core domain ATY49_04595 PF13276 HTH-like domain ATY49_04640 PF13936 Helix-turn-helix domain ATY49_04640 PF00665 Integrase core domain ATY49_04670 PF01527 Transposase ATY49_04700 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_04720 PF01609 Transposase DDE domain ATY49_04720 PF05598 Transposase domain (DUF772) ATY49_04740 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_04745 PF03009 Glycerophosphoryl diester phosphodiesterase family ATY49_04775 PF18324 Hypothetical protein TT1725 ATY49_04775 PF00180 Isocitrate/isopropylmalate dehydrogenase ATY49_04805 PF01527 Transposase ATY49_04830 PF05698 Bacterial trigger factor protein (TF) C-terminus ATY49_04830 PF05697 Bacterial trigger factor protein (TF) ATY49_04835 PF00574 Clp protease ATY49_04840 PF10431 C-terminal, D2-small domain, of ClpB protein ATY49_04840 PF06689 ClpX C4-type zinc finger ATY49_04840 PF07724 AAA domain (Cdc48 subfamily) ATY49_04845 PF02190 ATP-dependent protease La (LON) substrate-binding domain ATY49_04845 PF05362 Lon protease (S16) C-terminal proteolytic domain ATY49_04845 PF00004 ATPase family associated with various cellular activities (AAA) ATY49_04850 PF00216 Bacterial DNA-binding protein ATY49_04875 PF01476 LysM domain ATY49_04875 PF05257 CHAP domain ATY49_04880 PF16123 Hydroxyacylglutathione hydrolase C-terminus ATY49_04880 PF00753 Metallo-beta-lactamase superfamily ATY49_04890 PF00075 RNase H ATY49_04895 PF00929 Exonuclease ATY49_04925 PF16671 Actin cross-linking domain ATY49_04925 PF04717 Type VI secretion system, phage-baseplate injector ATY49_04965 PF00589 Phage integrase family ATY49_04965 PF13356 Arm DNA-binding domain ATY49_04975 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ATY49_04985 PF00753 Metallo-beta-lactamase superfamily ATY49_04985 PF12706 Beta-lactamase superfamily domain ATY49_04990 PF04055 Radical SAM superfamily ATY49_04990 PF06463 Molybdenum Cofactor Synthesis C ATY49_05000 PF01967 MoaC family ATY49_05005 PF02597 ThiS family ATY49_05010 PF02391 MoaE protein ATY49_05085 PF12170 DNA polymerase III tau subunit V interacting with alpha ATY49_05085 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ATY49_05085 PF12169 DNA polymerase III subunits gamma and tau domain III ATY49_05090 PF02575 YbaB/EbfC DNA-binding family ATY49_05095 PF13662 Toprim domain ATY49_05095 PF02132 RecR protein ATY49_05100 PF01230 HIT domain ATY49_05110 PF11992 Domain of unknown function (DUF3488) ATY49_05110 PF13559 Domain of unknown function (DUF4129) ATY49_05110 PF01841 Transglutaminase-like superfamily ATY49_05120 PF17863 AAA lid domain ATY49_05120 PF07726 ATPase family associated with various cellular activities (AAA) ATY49_05140 PF01327 Polypeptide deformylase ATY49_05175 PF05598 Transposase domain (DUF772) ATY49_05175 PF01609 Transposase DDE domain ATY49_05195 PF00462 Glutaredoxin ATY49_05200 PF01522 Polysaccharide deacetylase ATY49_05220 PF03193 RsgA GTPase ATY49_05235 PF00128 Alpha amylase, catalytic domain ATY49_05250 PF00356 Bacterial regulatory proteins, lacI family ATY49_05255 PF00106 short chain dehydrogenase ATY49_05260 PF03600 Citrate transporter ATY49_05270 PF00072 Response regulator receiver domain ATY49_05270 PF00486 Transcriptional regulatory protein, C terminal ATY49_05275 PF00512 His Kinase A (phospho-acceptor) domain ATY49_05275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_05275 PF08521 Two-component sensor kinase N-terminal ATY49_05285 PF00196 Bacterial regulatory proteins, luxR family ATY49_05285 PF00072 Response regulator receiver domain ATY49_05300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY49_05300 PF03466 LysR substrate binding domain ATY49_05310 PF07690 Major Facilitator Superfamily ATY49_05315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_05315 PF00512 His Kinase A (phospho-acceptor) domain ATY49_05325 PF00375 Sodium:dicarboxylate symporter family ATY49_05330 PF00390 Malic enzyme, N-terminal domain ATY49_05330 PF01515 Phosphate acetyl/butaryl transferase ATY49_05330 PF03949 Malic enzyme, NAD binding domain ATY49_05340 PF01527 Transposase ATY49_05345 PF13276 HTH-like domain ATY49_05345 PF13683 Integrase core domain ATY49_05365 PF02581 Thiamine monophosphate synthase ATY49_05370 PF00301 Rubredoxin ATY49_05375 PF13369 Transglutaminase-like superfamily ATY49_05385 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ATY49_05395 PF01812 5-formyltetrahydrofolate cyclo-ligase family ATY49_05400 PF05164 Cell division protein ZapA ATY49_05410 PF03695 Uncharacterised protein family (UPF0149) ATY49_05415 PF05195 Aminopeptidase P, N-terminal domain ATY49_05415 PF00557 Metallopeptidase family M24 ATY49_05430 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_05435 PF00557 Metallopeptidase family M24 ATY49_05450 PF04055 Radical SAM superfamily ATY49_05450 PF06969 HemN C-terminal domain ATY49_05455 PF01725 Ham1 family ATY49_05465 PF01138 3' exoribonuclease family, domain 1 ATY49_05465 PF03725 3' exoribonuclease family, domain 2 ATY49_05470 PF03755 YicC-like family, N-terminal region ATY49_05470 PF08340 Domain of unknown function (DUF1732) ATY49_05475 PF00625 Guanylate kinase ATY49_05485 PF01192 RNA polymerase Rpb6 ATY49_05490 PF13291 ACT domain ATY49_05490 PF04607 Region found in RelA / SpoT proteins ATY49_05490 PF02824 TGS domain ATY49_05495 PF01042 Endoribonuclease L-PSP ATY49_05500 PF00270 DEAD/DEAH box helicase ATY49_05500 PF17191 RecG wedge domain ATY49_05500 PF00271 Helicase conserved C-terminal domain ATY49_05505 PF01156 Inosine-uridine preferring nucleoside hydrolase ATY49_05510 PF01197 Ribosomal protein L31 ATY49_05515 PF00285 Citrate synthase, C-terminal domain ATY49_05530 PF00912 Transglycosylase ATY49_05530 PF17092 Penicillin-binding protein OB-like domain ATY49_05530 PF00905 Penicillin binding protein transpeptidase domain ATY49_05555 PF00263 Bacterial type II and III secretion system protein ATY49_05555 PF11741 AMIN domain ATY49_05555 PF03958 Bacterial type II/III secretion system short domain ATY49_05555 PF07660 Secretin and TonB N terminus short domain ATY49_05575 PF07726 ATPase family associated with various cellular activities (AAA) ATY49_05575 PF17863 AAA lid domain ATY49_05595 PF07584 Aerotolerance regulator N-terminal ATY49_05595 PF00092 von Willebrand factor type A domain ATY49_05610 PF00375 Sodium:dicarboxylate symporter family ATY49_05615 PF00456 Transketolase, thiamine diphosphate binding domain ATY49_05615 PF02779 Transketolase, pyrimidine binding domain ATY49_05615 PF02780 Transketolase, C-terminal domain ATY49_05620 PF07715 TonB-dependent Receptor Plug Domain ATY49_05620 PF00593 TonB dependent receptor ATY49_05625 PF04225 Opacity-associated protein A LysM-like domain ATY49_05625 PF01551 Peptidase family M23 ATY49_05630 PF03734 L,D-transpeptidase catalytic domain ATY49_05630 PF01476 LysM domain ATY49_05655 PF00501 AMP-binding enzyme ATY49_05675 PF00072 Response regulator receiver domain ATY49_05675 PF00486 Transcriptional regulatory protein, C terminal ATY49_05680 PF00512 His Kinase A (phospho-acceptor) domain ATY49_05680 PF08521 Two-component sensor kinase N-terminal ATY49_05680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_05700 PF03459 TOBE domain ATY49_05700 PF00005 ABC transporter ATY49_05705 PF00528 Binding-protein-dependent transport system inner membrane component ATY49_05715 PF04273 Putative phosphatase (DUF442) ATY49_05715 PF00753 Metallo-beta-lactamase superfamily ATY49_05750 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ATY49_05750 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ATY49_05755 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_05770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_05770 PF00672 HAMP domain ATY49_05770 PF00512 His Kinase A (phospho-acceptor) domain ATY49_05775 PF00072 Response regulator receiver domain ATY49_05775 PF00486 Transcriptional regulatory protein, C terminal ATY49_05785 PF08443 RimK-like ATP-grasp domain ATY49_05785 PF18030 RimK PreATP-grasp domain ATY49_05790 PF01609 Transposase DDE domain ATY49_05790 PF05598 Transposase domain (DUF772) ATY49_05825 PF00520 Ion transport protein ATY49_05825 PF00027 Cyclic nucleotide-binding domain ATY49_05830 PF00202 Aminotransferase class-III ATY49_05850 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ATY49_05850 PF00034 Cytochrome c ATY49_05865 PF00155 Aminotransferase class I and II ATY49_05875 PF00127 Copper binding proteins, plastocyanin/azurin family ATY49_05885 PF00202 Aminotransferase class-III ATY49_05910 PF03377 TAL effector repeat ATY49_05925 PF03377 TAL effector repeat ATY49_05965 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_05980 PF01609 Transposase DDE domain ATY49_05980 PF05598 Transposase domain (DUF772) ATY49_05990 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_06025 PF02303 Helix-destabilising protein ATY49_06090 PF03377 TAL effector repeat ATY49_06100 PF01502 Phosphoribosyl-AMP cyclohydrolase ATY49_06100 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ATY49_06105 PF00977 Histidine biosynthesis protein ATY49_06110 PF00977 Histidine biosynthesis protein ATY49_06115 PF00117 Glutamine amidotransferase class-I ATY49_06120 PF00475 Imidazoleglycerol-phosphate dehydratase ATY49_06125 PF00155 Aminotransferase class I and II ATY49_06130 PF00815 Histidinol dehydrogenase ATY49_06135 PF01634 ATP phosphoribosyltransferase ATY49_06135 PF08029 HisG, C-terminal domain ATY49_06150 PF13393 Histidyl-tRNA synthetase ATY49_06150 PF03129 Anticodon binding domain ATY49_06165 PF00291 Pyridoxal-phosphate dependent enzyme ATY49_06165 PF14821 Threonine synthase N terminus ATY49_06180 PF08544 GHMP kinases C terminal ATY49_06180 PF00288 GHMP kinases N terminal domain ATY49_06185 PF00742 Homoserine dehydrogenase ATY49_06185 PF13840 ACT domain ATY49_06185 PF01842 ACT domain ATY49_06185 PF00696 Amino acid kinase family ATY49_06185 PF03447 Homoserine dehydrogenase, NAD binding domain ATY49_06190 PF03073 TspO/MBR family ATY49_06200 PF00171 Aldehyde dehydrogenase family ATY49_06215 PF01180 Dihydroorotate dehydrogenase ATY49_06220 PF01565 FAD binding domain ATY49_06220 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ATY49_06225 PF00892 EamA-like transporter family ATY49_06230 PF01177 Asp/Glu/Hydantoin racemase ATY49_06240 PF07690 Major Facilitator Superfamily ATY49_06250 PF01569 PAP2 superfamily ATY49_06255 PF04551 GcpE protein ATY49_06265 PF00072 Response regulator receiver domain ATY49_06275 PF17674 HHH domain ATY49_06275 PF00575 S1 RNA binding domain ATY49_06275 PF09371 Tex-like protein N-terminal domain ATY49_06275 PF16921 Tex protein YqgF-like domain ATY49_06285 PF00355 Rieske [2Fe-2S] domain ATY49_06285 PF01266 FAD dependent oxidoreductase ATY49_06300 PF00561 alpha/beta hydrolase fold ATY49_06310 PF01066 CDP-alcohol phosphatidyltransferase ATY49_06345 PF03618 Kinase/pyrophosphorylase ATY49_06350 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ATY49_06350 PF02896 PEP-utilising enzyme, TIM barrel domain ATY49_06350 PF00391 PEP-utilising enzyme, mobile domain ATY49_06355 PF00924 Mechanosensitive ion channel ATY49_06355 PF05552 Conserved TM helix ATY49_06360 PF00929 Exonuclease ATY49_06365 PF14437 MafB19-like deaminase ATY49_06370 PF02742 Iron dependent repressor, metal binding and dimerisation domain ATY49_06370 PF01325 Iron dependent repressor, N-terminal DNA binding domain ATY49_06375 PF01566 Natural resistance-associated macrophage protein ATY49_06390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY49_06390 PF03466 LysR substrate binding domain ATY49_06395 PF03601 Conserved hypothetical protein 698 ATY49_06410 PF03466 LysR substrate binding domain ATY49_06410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY49_06415 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus ATY49_06415 PF00361 Proton-conducting membrane transporter ATY49_06415 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ATY49_06420 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) ATY49_06425 PF00117 Glutamine amidotransferase class-I ATY49_06425 PF00958 GMP synthase C terminal domain ATY49_06425 PF02540 NAD synthase ATY49_06430 PF00478 IMP dehydrogenase / GMP reductase domain ATY49_06430 PF00571 CBS domain ATY49_06435 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ATY49_06435 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ATY49_06470 PF02254 TrkA-N domain ATY49_06470 PF00999 Sodium/hydrogen exchanger family ATY49_06475 PF00483 Nucleotidyl transferase ATY49_06480 PF02719 Polysaccharide biosynthesis protein ATY49_06485 PF00953 Glycosyl transferase family 4 ATY49_06490 PF18073 Rubredoxin metal binding domain ATY49_06500 PF00216 Bacterial DNA-binding protein ATY49_06505 PF00575 S1 RNA binding domain ATY49_06510 PF02224 Cytidylate kinase ATY49_06515 PF00444 Ribosomal protein L36 ATY49_06525 PF04371 Porphyromonas-type peptidyl-arginine deiminase ATY49_06530 PF00795 Carbon-nitrogen hydrolase ATY49_06550 PF00528 Binding-protein-dependent transport system inner membrane component ATY49_06555 PF00528 Binding-protein-dependent transport system inner membrane component ATY49_06575 PF00356 Bacterial regulatory proteins, lacI family ATY49_06585 PF03795 YCII-related domain ATY49_06590 PF02616 Segregation and condensation protein ScpA ATY49_06595 PF04079 Segregation and condensation complex subunit ScpB ATY49_06600 PF01479 S4 domain ATY49_06600 PF00849 RNA pseudouridylate synthase ATY49_06620 PF00795 Carbon-nitrogen hydrolase ATY49_06625 PF00155 Aminotransferase class I and II ATY49_06630 PF00005 ABC transporter ATY49_06635 PF03379 CcmB protein ATY49_06640 PF01578 Cytochrome C assembly protein ATY49_06650 PF03100 CcmE ATY49_06655 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ATY49_06655 PF01578 Cytochrome C assembly protein ATY49_06660 PF08534 Redoxin ATY49_06665 PF03918 Cytochrome C biogenesis protein ATY49_06690 PF01565 FAD binding domain ATY49_06690 PF02913 FAD linked oxidases, C-terminal domain ATY49_06695 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATY49_06695 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ATY49_06705 PF13520 Amino acid permease ATY49_06710 PF13520 Amino acid permease ATY49_06715 PF00596 Class II Aldolase and Adducin N-terminal domain ATY49_06720 PF03079 ARD/ARD' family ATY49_06765 PF03377 TAL effector repeat ATY49_06780 PF03377 TAL effector repeat ATY49_06795 PF03466 LysR substrate binding domain ATY49_06795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY49_06800 PF02525 Flavodoxin-like fold ATY49_06805 PF05598 Transposase domain (DUF772) ATY49_06805 PF01609 Transposase DDE domain ATY49_06825 PF02403 Seryl-tRNA synthetase N-terminal domain ATY49_06825 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ATY49_06830 PF03544 Gram-negative bacterial TonB protein C-terminal ATY49_06840 PF01527 Transposase ATY49_06845 PF13276 HTH-like domain ATY49_06845 PF13683 Integrase core domain ATY49_06850 PF05598 Transposase domain (DUF772) ATY49_06860 PF01609 Transposase DDE domain ATY49_06860 PF05598 Transposase domain (DUF772) ATY49_06900 PF05598 Transposase domain (DUF772) ATY49_06900 PF01609 Transposase DDE domain ATY49_06905 PF05598 Transposase domain (DUF772) ATY49_06905 PF01609 Transposase DDE domain ATY49_06915 PF00561 alpha/beta hydrolase fold ATY49_06920 PF00313 'Cold-shock' DNA-binding domain ATY49_06930 PF00872 Transposase, Mutator family ATY49_06945 PF01609 Transposase DDE domain ATY49_06945 PF05598 Transposase domain (DUF772) ATY49_06955 PF08032 RNA 2'-O ribose methyltransferase substrate binding ATY49_06955 PF00588 SpoU rRNA Methylase family ATY49_06975 PF17876 Cold shock domain ATY49_06975 PF08461 Ribonuclease R winged-helix domain ATY49_06975 PF08206 Ribonuclease B OB domain ATY49_06975 PF00773 RNB domain ATY49_06975 PF00575 S1 RNA binding domain ATY49_06995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATY49_06995 PF02770 Acyl-CoA dehydrogenase, middle domain ATY49_06995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATY49_07000 PF01209 ubiE/COQ5 methyltransferase family ATY49_07005 PF02574 Homocysteine S-methyltransferase ATY49_07005 PF00809 Pterin binding enzyme ATY49_07010 PF02607 B12 binding domain ATY49_07010 PF00809 Pterin binding enzyme ATY49_07010 PF02310 B12 binding domain ATY49_07010 PF02574 Homocysteine S-methyltransferase ATY49_07010 PF02965 Vitamin B12 dependent methionine synthase, activation domain ATY49_07020 PF00294 pfkB family carbohydrate kinase ATY49_07025 PF07690 Major Facilitator Superfamily ATY49_07045 PF04102 SlyX ATY49_07050 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ATY49_07050 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ATY49_07050 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ATY49_07055 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ATY49_07055 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATY49_07060 PF00255 Glutathione peroxidase ATY49_07070 PF00392 Bacterial regulatory proteins, gntR family ATY49_07075 PF00005 ABC transporter ATY49_07105 PF00206 Lyase ATY49_07105 PF10415 Fumarase C C-terminus ATY49_07115 PF13936 Helix-turn-helix domain ATY49_07115 PF00665 Integrase core domain ATY49_07125 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_07145 PF08328 Adenylosuccinate lyase C-terminal ATY49_07145 PF00206 Lyase ATY49_07160 PF08007 Cupin superfamily protein ATY49_07170 PF16078 2-oxoglutarate dehydrogenase N-terminus ATY49_07170 PF00676 Dehydrogenase E1 component ATY49_07170 PF02779 Transketolase, pyrimidine binding domain ATY49_07170 PF16870 2-oxoglutarate dehydrogenase C-terminal ATY49_07175 PF02817 e3 binding domain ATY49_07175 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ATY49_07175 PF00364 Biotin-requiring enzyme ATY49_07180 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY49_07180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ATY49_07185 PF03641 Possible lysine decarboxylase ATY49_07190 PF01205 Uncharacterized protein family UPF0029 ATY49_07195 PF00005 ABC transporter ATY49_07195 PF00664 ABC transporter transmembrane region ATY49_07200 PF03466 LysR substrate binding domain ATY49_07200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY49_07215 PF01817 Chorismate mutase type II ATY49_07215 PF02153 Prephenate dehydrogenase ATY49_07220 PF08543 Phosphomethylpyrimidine kinase ATY49_07225 PF00684 DnaJ central domain ATY49_07225 PF01556 DnaJ C terminal domain ATY49_07225 PF00226 DnaJ domain ATY49_07230 PF00012 Hsp70 protein ATY49_07235 PF01025 GrpE ATY49_07240 PF01628 HrcA protein C terminal domain ATY49_07240 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding ATY49_07245 PF02463 RecF/RecN/SMC N terminal domain ATY49_07250 PF01475 Ferric uptake regulator family ATY49_07255 PF04355 SmpA / OmlA family ATY49_07260 PF03658 RnfH family Ubiquitin ATY49_07265 PF03364 Polyketide cyclase / dehydrase and lipid transport ATY49_07270 PF01668 SmpB protein ATY49_07290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATY49_07290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATY49_07290 PF02770 Acyl-CoA dehydrogenase, middle domain ATY49_07290 PF12806 Acetyl-CoA dehydrogenase C-terminal like ATY49_07300 PF02779 Transketolase, pyrimidine binding domain ATY49_07300 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ATY49_07300 PF02780 Transketolase, C-terminal domain ATY49_07320 PF13936 Helix-turn-helix domain ATY49_07320 PF00665 Integrase core domain ATY49_07355 PF07690 Major Facilitator Superfamily ATY49_07360 PF00529 HlyD membrane-fusion protein of T1SS ATY49_07360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ATY49_07365 PF02321 Outer membrane efflux protein ATY49_07380 PF00521 DNA gyrase/topoisomerase IV, subunit A ATY49_07380 PF03989 DNA gyrase C-terminal domain, beta-propeller ATY49_07385 PF00210 Ferritin-like domain ATY49_07390 PF01804 Penicillin amidase ATY49_07395 PF00593 TonB dependent receptor ATY49_07395 PF07715 TonB-dependent Receptor Plug Domain ATY49_07410 PF00733 Asparagine synthase ATY49_07410 PF13537 Glutamine amidotransferase domain ATY49_07415 PF07687 Peptidase dimerisation domain ATY49_07415 PF01546 Peptidase family M20/M25/M40 ATY49_07425 PF03960 ArsC family ATY49_07435 PF00132 Bacterial transferase hexapeptide (six repeats) ATY49_07435 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ATY49_07435 PF14602 Hexapeptide repeat of succinyl-transferase ATY49_07440 PF08335 GlnD PII-uridylyltransferase ATY49_07440 PF01909 Nucleotidyltransferase domain ATY49_07440 PF01966 HD domain ATY49_07445 PF00557 Metallopeptidase family M24 ATY49_07480 PF00318 Ribosomal protein S2 ATY49_07485 PF00889 Elongation factor TS ATY49_07495 PF00696 Amino acid kinase family ATY49_07500 PF01765 Ribosome recycling factor ATY49_07505 PF01255 Putative undecaprenyl diphosphate synthase ATY49_07515 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ATY49_07515 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ATY49_07515 PF13288 DXP reductoisomerase C-terminal domain ATY49_07520 PF17820 PDZ domain ATY49_07520 PF02163 Peptidase family M50 ATY49_07525 PF07244 Surface antigen variable number repeat ATY49_07525 PF01103 Surface antigen ATY49_07530 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ATY49_07530 PF00132 Bacterial transferase hexapeptide (six repeats) ATY49_07535 PF07977 FabA-like domain ATY49_07540 PF00132 Bacterial transferase hexapeptide (six repeats) ATY49_07540 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ATY49_07545 PF02684 Lipid-A-disaccharide synthetase ATY49_07550 PF01351 Ribonuclease HII ATY49_07555 PF07733 Bacterial DNA polymerase III alpha NTPase domain ATY49_07555 PF01336 OB-fold nucleic acid binding domain ATY49_07555 PF02811 PHP domain ATY49_07555 PF14579 Helix-hairpin-helix motif ATY49_07555 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ATY49_07560 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ATY49_07570 PF00593 TonB dependent receptor ATY49_07570 PF07715 TonB-dependent Receptor Plug Domain ATY49_07575 PF00005 ABC transporter ATY49_07575 PF13732 Domain of unknown function (DUF4162) ATY49_07645 PF05598 Transposase domain (DUF772) ATY49_07660 PF02592 Putative vitamin uptake transporter ATY49_07670 PF02574 Homocysteine S-methyltransferase ATY49_07675 PF00324 Amino acid permease ATY49_07695 PF01588 Putative tRNA binding domain ATY49_07695 PF09334 tRNA synthetases class I (M) ATY49_07705 PF04060 Putative Fe-S cluster ATY49_07725 PF04542 Sigma-70 region 2 ATY49_07725 PF04545 Sigma-70, region 4 ATY49_07770 PF01042 Endoribonuclease L-PSP ATY49_07780 PF09924 Uncharacterised conserved protein (DUF2156) ATY49_07780 PF03706 Lysylphosphatidylglycerol synthase TM region ATY49_07830 PF07690 Major Facilitator Superfamily ATY49_07835 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ATY49_07845 PF08274 PhnA Zinc-Ribbon ATY49_07845 PF03831 PhnA domain ATY49_07860 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATY49_07890 PF01258 Prokaryotic dksA/traR C4-type zinc finger ATY49_07900 PF01863 Protein of unknown function DUF45 ATY49_07905 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ATY49_07905 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ATY49_07910 PF03797 Autotransporter beta-domain ATY49_07910 PF12951 Passenger-associated-transport-repeat ATY49_07910 PF00082 Subtilase family ATY49_07915 PF00108 Thiolase, N-terminal domain ATY49_07915 PF02803 Thiolase, C-terminal domain ATY49_07930 PF00072 Response regulator receiver domain ATY49_07930 PF00990 Diguanylate cyclase, GGDEF domain ATY49_07945 PF04679 ATP dependent DNA ligase C terminal region ATY49_07945 PF01068 ATP dependent DNA ligase domain ATY49_07945 PF04675 DNA ligase N terminus ATY49_07955 PF01068 ATP dependent DNA ligase domain ATY49_07955 PF04675 DNA ligase N terminus ATY49_07955 PF04679 ATP dependent DNA ligase C terminal region ATY49_07960 PF00271 Helicase conserved C-terminal domain ATY49_07960 PF08494 DEAD/H associated ATY49_07960 PF00270 DEAD/DEAH box helicase ATY49_07980 PF01494 FAD binding domain ATY49_07985 PF00313 'Cold-shock' DNA-binding domain ATY49_07990 PF01048 Phosphorylase superfamily ATY49_08000 PF00933 Glycosyl hydrolase family 3 N terminal domain ATY49_08005 PF04244 Deoxyribodipyrimidine photo-lyase-related protein ATY49_08010 PF01593 Flavin containing amine oxidoreductase ATY49_08015 PF01323 DSBA-like thioredoxin domain ATY49_08020 PF05598 Transposase domain (DUF772) ATY49_08035 PF05958 tRNA (Uracil-5-)-methyltransferase ATY49_08045 PF11967 Recombination protein O N terminal ATY49_08045 PF02565 Recombination protein O C terminal ATY49_08050 PF01926 50S ribosome-binding GTPase ATY49_08050 PF07650 KH domain ATY49_08055 PF00035 Double-stranded RNA binding motif ATY49_08055 PF14622 Ribonuclease-III-like ATY49_08065 PF10502 Signal peptidase, peptidase S26 ATY49_08070 PF00679 Elongation factor G C-terminus ATY49_08070 PF00009 Elongation factor Tu GTP binding domain ATY49_08070 PF03144 Elongation factor Tu domain 2 ATY49_08070 PF06421 GTP-binding protein LepA C-terminus ATY49_08075 PF13180 PDZ domain ATY49_08085 PF04542 Sigma-70 region 2 ATY49_08085 PF08281 Sigma-70, region 4 ATY49_08090 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ATY49_08090 PF00378 Enoyl-CoA hydratase/isomerase ATY49_08090 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ATY49_08095 PF01545 Cation efflux family ATY49_08100 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ATY49_08100 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ATY49_08105 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ATY49_08105 PF00378 Enoyl-CoA hydratase/isomerase ATY49_08105 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ATY49_08110 PF00378 Enoyl-CoA hydratase/isomerase ATY49_08115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATY49_08115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATY49_08115 PF02770 Acyl-CoA dehydrogenase, middle domain ATY49_08120 PF00171 Aldehyde dehydrogenase family ATY49_08125 PF09856 Predicted transcriptional regulator (DUF2083) ATY49_08125 PF01381 Helix-turn-helix ATY49_08125 PF06114 IrrE N-terminal-like domain ATY49_08140 PF07745 Glycosyl hydrolase family 53 ATY49_08175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_08175 PF00072 Response regulator receiver domain ATY49_08175 PF00512 His Kinase A (phospho-acceptor) domain ATY49_08175 PF01627 Hpt domain ATY49_08175 PF00672 HAMP domain ATY49_08175 PF17149 Periplasmic sensor domain found in signal transduction proteins ATY49_08180 PF17149 Periplasmic sensor domain found in signal transduction proteins ATY49_08180 PF01627 Hpt domain ATY49_08180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_08180 PF00672 HAMP domain ATY49_08180 PF00072 Response regulator receiver domain ATY49_08180 PF00512 His Kinase A (phospho-acceptor) domain ATY49_08185 PF17149 Periplasmic sensor domain found in signal transduction proteins ATY49_08185 PF00072 Response regulator receiver domain ATY49_08185 PF00512 His Kinase A (phospho-acceptor) domain ATY49_08185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_08185 PF00672 HAMP domain ATY49_08185 PF01627 Hpt domain ATY49_08190 PF04264 YceI-like domain ATY49_08200 PF04264 YceI-like domain ATY49_08210 PF03315 Serine dehydratase beta chain ATY49_08210 PF03313 Serine dehydratase alpha chain ATY49_08220 PF01053 Cys/Met metabolism PLP-dependent enzyme ATY49_08225 PF00561 alpha/beta hydrolase fold ATY49_08230 PF01476 LysM domain ATY49_08230 PF08525 Opacity-associated protein A N-terminal motif ATY49_08230 PF01551 Peptidase family M23 ATY49_08235 PF00009 Elongation factor Tu GTP binding domain ATY49_08235 PF16658 Class II release factor RF3, C-terminal domain ATY49_08240 PF03006 Haemolysin-III related ATY49_08250 PF00478 IMP dehydrogenase / GMP reductase domain ATY49_08250 PF00571 CBS domain ATY49_08255 PF00535 Glycosyl transferase family 2 ATY49_08260 PF00912 Transglycosylase ATY49_08265 PF01430 Hsp33 protein ATY49_08275 PF07715 TonB-dependent Receptor Plug Domain ATY49_08275 PF00593 TonB dependent receptor ATY49_08280 PF00440 Bacterial regulatory proteins, tetR family ATY49_08285 PF00561 alpha/beta hydrolase fold ATY49_08290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATY49_08290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATY49_08290 PF09317 Domain of unknown function (DUF1974) ATY49_08315 PF01597 Glycine cleavage H-protein ATY49_08320 PF08669 Glycine cleavage T-protein C-terminal barrel domain ATY49_08320 PF01571 Aminomethyltransferase folate-binding domain ATY49_08330 PF16200 C-terminal region of band_7 ATY49_08330 PF01145 SPFH domain / Band 7 family ATY49_08340 PF03819 MazG nucleotide pyrophosphohydrolase domain ATY49_08345 PF00459 Inositol monophosphatase family ATY49_08350 PF00293 NUDIX domain ATY49_08355 PF00202 Aminotransferase class-III ATY49_08360 PF04452 RNA methyltransferase ATY49_08365 PF02685 Glucokinase ATY49_08380 PF00704 Glycosyl hydrolases family 18 ATY49_08380 PF01476 LysM domain ATY49_08385 PF07691 PA14 domain ATY49_08385 PF00728 Glycosyl hydrolase family 20, catalytic domain ATY49_08385 PF02838 Glycosyl hydrolase family 20, domain 2 ATY49_08395 PF07691 PA14 domain ATY49_08395 PF00933 Glycosyl hydrolase family 3 N terminal domain ATY49_08395 PF01915 Glycosyl hydrolase family 3 C-terminal domain ATY49_08395 PF14310 Fibronectin type III-like domain ATY49_08400 PF00664 ABC transporter transmembrane region ATY49_08400 PF00005 ABC transporter ATY49_08400 PF03412 Peptidase C39 family ATY49_08455 PF17678 Glycosyl hydrolase family 92 N-terminal domain ATY49_08455 PF07971 Glycosyl hydrolase family 92 ATY49_08460 PF01301 Glycosyl hydrolases family 35 ATY49_08505 PF03932 CutC family ATY49_08510 PF01112 Asparaginase ATY49_08525 PF12034 Domain of unknown function (DUF3520) ATY49_08525 PF00092 von Willebrand factor type A domain ATY49_08525 PF12450 von Willebrand factor ATY49_08540 PF13302 Acetyltransferase (GNAT) domain ATY49_08555 PF01584 CheW-like domain ATY49_08555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_08555 PF01627 Hpt domain ATY49_08555 PF00072 Response regulator receiver domain ATY49_08560 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ATY49_08560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY49_08565 PF01584 CheW-like domain ATY49_08570 PF00072 Response regulator receiver domain ATY49_08575 PF00072 Response regulator receiver domain ATY49_08580 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ATY49_08580 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ATY49_08590 PF03747 ADP-ribosylglycohydrolase ATY49_08595 PF00814 Glycoprotease family ATY49_08600 PF13307 Helicase C-terminal domain ATY49_08600 PF04851 Type III restriction enzyme, res subunit ATY49_08610 PF14814 Bifunctional transglycosylase second domain ATY49_08610 PF00905 Penicillin binding protein transpeptidase domain ATY49_08610 PF00912 Transglycosylase ATY49_08615 PF00535 Glycosyl transferase family 2 ATY49_08625 PF13291 ACT domain ATY49_08625 PF02824 TGS domain ATY49_08625 PF04607 Region found in RelA / SpoT proteins ATY49_08630 PF12706 Beta-lactamase superfamily domain ATY49_08635 PF03070 TENA/THI-4/PQQC family ATY49_08640 PF05402 Coenzyme PQQ synthesis protein D (PqqD) ATY49_08645 PF13186 Iron-sulfur cluster-binding domain ATY49_08645 PF04055 Radical SAM superfamily ATY49_08660 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_08670 PF02685 Glucokinase ATY49_08675 PF02685 Glucokinase ATY49_08680 PF02685 Glucokinase ATY49_08690 PF04408 Helicase associated domain (HA2) ATY49_08690 PF11898 Domain of unknown function (DUF3418) ATY49_08690 PF00270 DEAD/DEAH box helicase ATY49_08690 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ATY49_08690 PF00271 Helicase conserved C-terminal domain ATY49_08695 PF00210 Ferritin-like domain ATY49_08700 PF00271 Helicase conserved C-terminal domain ATY49_08700 PF00570 HRDC domain ATY49_08700 PF16124 RecQ zinc-binding ATY49_08700 PF09382 RQC domain ATY49_08700 PF00270 DEAD/DEAH box helicase ATY49_08720 PF06508 Queuosine biosynthesis protein QueC ATY49_08725 PF05598 Transposase domain (DUF772) ATY49_08730 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_08775 PF01479 S4 domain ATY49_08775 PF00849 RNA pseudouridylate synthase ATY49_08780 PF04055 Radical SAM superfamily ATY49_08790 PF00691 OmpA family ATY49_08795 PF04052 TolB amino-terminal domain ATY49_08795 PF07676 WD40-like Beta Propeller Repeat ATY49_08805 PF02472 Biopolymer transport protein ExbD/TolR ATY49_08810 PF01618 MotA/TolQ/ExbB proton channel family ATY49_08815 PF03061 Thioesterase superfamily ATY49_08820 PF17864 RuvB AAA lid domain ATY49_08820 PF05491 RuvB C-terminal winged helix domain ATY49_08820 PF05496 Holliday junction DNA helicase RuvB P-loop domain ATY49_08825 PF02705 K+ potassium transporter ATY49_08830 PF07499 RuvA, C-terminal domain ATY49_08830 PF01330 RuvA N terminal domain ATY49_08835 PF02075 Crossover junction endodeoxyribonuclease RuvC ATY49_08840 PF01709 Transcriptional regulator ATY49_08855 PF02938 GAD domain ATY49_08855 PF01336 OB-fold nucleic acid binding domain ATY49_08855 PF00152 tRNA synthetases class II (D, K and N) ATY49_08875 PF05506 Domain of unknown function (DUF756) ATY49_08875 PF04185 Phosphoesterase family ATY49_08880 PF05506 Domain of unknown function (DUF756) ATY49_08880 PF04185 Phosphoesterase family ATY49_08885 PF04185 Phosphoesterase family ATY49_08885 PF05506 Domain of unknown function (DUF756) ATY49_08895 PF01527 Transposase ATY49_08905 PF18073 Rubredoxin metal binding domain ATY49_08915 PF01527 Transposase ATY49_08920 PF13683 Integrase core domain ATY49_08920 PF13276 HTH-like domain ATY49_08930 PF05192 MutS domain III ATY49_08930 PF00488 MutS domain V ATY49_08930 PF05188 MutS domain II ATY49_08930 PF01624 MutS domain I ATY49_08930 PF05190 MutS family domain IV ATY49_08945 PF13276 HTH-like domain ATY49_08945 PF13683 Integrase core domain ATY49_08950 PF01527 Transposase ATY49_08975 PF04717 Type VI secretion system, phage-baseplate injector ATY49_08985 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ATY49_08990 PF00510 Cytochrome c oxidase subunit III ATY49_08995 PF00115 Cytochrome C and Quinol oxidase polypeptide I ATY49_09000 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ATY49_09000 PF06481 COX Aromatic Rich Motif ATY49_09010 PF02401 LytB protein ATY49_09015 PF01252 Signal peptidase (SPase) II ATY49_09020 PF08264 Anticodon-binding domain of tRNA ATY49_09020 PF00133 tRNA synthetases class I (I, L, M and V) ATY49_09020 PF06827 Zinc finger found in FPG and IleRS ATY49_09025 PF01687 Riboflavin kinase ATY49_09025 PF06574 FAD synthetase ATY49_09035 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_09040 PF03023 Lipid II flippase MurJ ATY49_09045 PF01649 Ribosomal protein S20 ATY49_09050 PF01018 GTP1/OBG ATY49_09050 PF01926 50S ribosome-binding GTPase ATY49_09055 PF01016 Ribosomal L27 protein ATY49_09060 PF00829 Ribosomal prokaryotic L21 protein ATY49_09065 PF00005 ABC transporter ATY49_09065 PF17755 UvrA DNA-binding domain ATY49_09065 PF17760 UvrA interaction domain ATY49_09080 PF00378 Enoyl-CoA hydratase/isomerase ATY49_09095 PF04542 Sigma-70 region 2 ATY49_09095 PF08281 Sigma-70, region 4 ATY49_09115 PF04377 Arginine-tRNA-protein transferase, C terminus ATY49_09115 PF04376 Arginine-tRNA-protein transferase, N terminus ATY49_09145 PF00593 TonB dependent receptor ATY49_09145 PF07715 TonB-dependent Receptor Plug Domain ATY49_09155 PF02358 Trehalose-phosphatase ATY49_09160 PF00723 Glycosyl hydrolases family 15 ATY49_09165 PF00982 Glycosyltransferase family 20 ATY49_09185 PF00849 RNA pseudouridylate synthase ATY49_09190 PF13525 Outer membrane lipoprotein ATY49_09195 PF00795 Carbon-nitrogen hydrolase ATY49_09195 PF02540 NAD synthase ATY49_09205 PF02629 CoA binding domain ATY49_09205 PF00549 CoA-ligase ATY49_09210 PF08442 ATP-grasp domain ATY49_09210 PF00549 CoA-ligase ATY49_09215 PF00512 His Kinase A (phospho-acceptor) domain ATY49_09215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_09220 PF00158 Sigma-54 interaction domain ATY49_09220 PF00072 Response regulator receiver domain ATY49_09220 PF02954 Bacterial regulatory protein, Fis family ATY49_09225 PF02661 Fic/DOC family ATY49_09225 PF18543 Intracellular delivery domain ATY49_09230 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ATY49_09230 PF00437 Type II/IV secretion system protein ATY49_09245 PF08019 Phosphoethanolamine transferase EptA/EptB ATY49_09245 PF00884 Sulfatase ATY49_09250 PF00114 Pilin (bacterial filament) ATY49_09250 PF07963 Prokaryotic N-terminal methylation motif ATY49_09255 PF00482 Type II secretion system (T2SS), protein F ATY49_09260 PF06750 Bacterial Peptidase A24 N-terminal domain ATY49_09260 PF01478 Type IV leader peptidase family ATY49_09265 PF01121 Dephospho-CoA kinase ATY49_09285 PF01609 Transposase DDE domain ATY49_09285 PF05598 Transposase domain (DUF772) ATY49_09295 PF01609 Transposase DDE domain ATY49_09295 PF05598 Transposase domain (DUF772) ATY49_09310 PF01609 Transposase DDE domain ATY49_09310 PF05598 Transposase domain (DUF772) ATY49_09320 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_09330 PF00664 ABC transporter transmembrane region ATY49_09330 PF00005 ABC transporter ATY49_09340 PF00873 AcrB/AcrD/AcrF family ATY49_09360 PF00486 Transcriptional regulatory protein, C terminal ATY49_09360 PF00072 Response regulator receiver domain ATY49_09365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_09365 PF00512 His Kinase A (phospho-acceptor) domain ATY49_09365 PF00672 HAMP domain ATY49_09370 PF00999 Sodium/hydrogen exchanger family ATY49_09375 PF00144 Beta-lactamase ATY49_09380 PF03737 Aldolase/RraA ATY49_09395 PF01479 S4 domain ATY49_09395 PF00849 RNA pseudouridylate synthase ATY49_09400 PF08448 PAS fold ATY49_09400 PF00990 Diguanylate cyclase, GGDEF domain ATY49_09400 PF00563 EAL domain ATY49_09405 PF00271 Helicase conserved C-terminal domain ATY49_09405 PF03880 DbpA RNA binding domain ATY49_09405 PF00270 DEAD/DEAH box helicase ATY49_09450 PF02805 Metal binding domain of Ada ATY49_09450 PF06029 AlkA N-terminal domain ATY49_09450 PF12833 Helix-turn-helix domain ATY49_09450 PF00730 HhH-GPD superfamily base excision DNA repair protein ATY49_09455 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ATY49_09455 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ATY49_09465 PF00654 Voltage gated chloride channel ATY49_09470 PF00107 Zinc-binding dehydrogenase ATY49_09470 PF08240 Alcohol dehydrogenase GroES-like domain ATY49_09490 PF07715 TonB-dependent Receptor Plug Domain ATY49_09490 PF00593 TonB dependent receptor ATY49_09510 PF05736 OprF membrane domain ATY49_09510 PF00691 OmpA family ATY49_09520 PF00875 DNA photolyase ATY49_09520 PF03441 FAD binding domain of DNA photolyase ATY49_09525 PF00772 DnaB-like helicase N terminal domain ATY49_09525 PF03796 DnaB-like helicase C terminal domain ATY49_09530 PF03358 NADPH-dependent FMN reductase ATY49_09535 PF13537 Glutamine amidotransferase domain ATY49_09535 PF00733 Asparagine synthase ATY49_09540 PF13417 Glutathione S-transferase, N-terminal domain ATY49_09560 PF02770 Acyl-CoA dehydrogenase, middle domain ATY49_09560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATY49_09560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATY49_09575 PF01026 TatD related DNase ATY49_09580 PF00899 ThiF family ATY49_09595 PF00313 'Cold-shock' DNA-binding domain ATY49_09620 PF01475 Ferric uptake regulator family ATY49_09625 PF00749 tRNA synthetases class I (E and Q), catalytic domain ATY49_09655 PF01609 Transposase DDE domain ATY49_09655 PF05598 Transposase domain (DUF772) ATY49_09675 PF01609 Transposase DDE domain ATY49_09675 PF05598 Transposase domain (DUF772) ATY49_09700 PF00672 HAMP domain ATY49_09700 PF00512 His Kinase A (phospho-acceptor) domain ATY49_09700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_09715 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ATY49_09725 PF17757 UvrB interaction domain ATY49_09725 PF03461 TRCF domain ATY49_09725 PF00271 Helicase conserved C-terminal domain ATY49_09725 PF02559 CarD-like/TRCF domain ATY49_09725 PF00270 DEAD/DEAH box helicase ATY49_09735 PF01584 CheW-like domain ATY49_09735 PF09078 CheY binding ATY49_09735 PF02895 Signal transducing histidine kinase, homodimeric domain ATY49_09735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_09735 PF01627 Hpt domain ATY49_09740 PF00672 HAMP domain ATY49_09740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY49_09740 PF02203 Tar ligand binding domain homologue ATY49_09745 PF01584 CheW-like domain ATY49_09750 PF00563 EAL domain ATY49_09750 PF13426 PAS domain ATY49_09750 PF00990 Diguanylate cyclase, GGDEF domain ATY49_09755 PF03705 CheR methyltransferase, all-alpha domain ATY49_09755 PF01739 CheR methyltransferase, SAM binding domain ATY49_09760 PF00072 Response regulator receiver domain ATY49_09760 PF01339 CheB methylesterase ATY49_09770 PF05649 Peptidase family M13 ATY49_09770 PF01431 Peptidase family M13 ATY49_09780 PF00300 Histidine phosphatase superfamily (branch 1) ATY49_09785 PF04493 Endonuclease V ATY49_09795 PF02678 Pirin ATY49_09795 PF05726 Pirin C-terminal cupin domain ATY49_09835 PF04717 Type VI secretion system, phage-baseplate injector ATY49_09860 PF04717 Type VI secretion system, phage-baseplate injector ATY49_09870 PF02678 Pirin ATY49_09870 PF05726 Pirin C-terminal cupin domain ATY49_09875 PF02554 Carbon starvation protein CstA ATY49_09875 PF13722 5TM C-terminal transporter carbon starvation CstA ATY49_09880 PF04328 Selenoprotein, putative ATY49_09905 PF00107 Zinc-binding dehydrogenase ATY49_09905 PF14765 Polyketide synthase dehydratase ATY49_09905 PF00550 Phosphopantetheine attachment site ATY49_09905 PF08659 KR domain ATY49_09905 PF02801 Beta-ketoacyl synthase, C-terminal domain ATY49_09905 PF00109 Beta-ketoacyl synthase, N-terminal domain ATY49_09905 PF00698 Acyl transferase domain ATY49_09905 PF08240 Alcohol dehydrogenase GroES-like domain ATY49_09905 PF16197 Ketoacyl-synthetase C-terminal extension ATY49_09910 PF00360 Phytochrome region ATY49_09910 PF00563 EAL domain ATY49_09910 PF01590 GAF domain ATY49_09910 PF00990 Diguanylate cyclase, GGDEF domain ATY49_09915 PF00436 Single-strand binding protein family ATY49_09920 PF00348 Polyprenyl synthetase ATY49_09935 PF08245 Mur ligase middle domain ATY49_09950 PF01842 ACT domain ATY49_09950 PF00696 Amino acid kinase family ATY49_09955 PF02567 Phenazine biosynthesis-like protein ATY49_09960 PF02567 Phenazine biosynthesis-like protein ATY49_09965 PF02567 Phenazine biosynthesis-like protein ATY49_09975 PF02566 OsmC-like protein ATY49_09980 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ATY49_09980 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ATY49_09985 PF03652 Holliday junction resolvase ATY49_09990 PF02622 Uncharacterized ACR, COG1678 ATY49_10005 PF13302 Acetyltransferase (GNAT) domain ATY49_10005 PF13673 Acetyltransferase (GNAT) domain ATY49_10005 PF00117 Glutamine amidotransferase class-I ATY49_10005 PF00958 GMP synthase C terminal domain ATY49_10005 PF03352 Methyladenine glycosylase ATY49_10020 PF00437 Type II/IV secretion system protein ATY49_10025 PF00437 Type II/IV secretion system protein ATY49_10030 PF01168 Alanine racemase, N-terminal domain ATY49_10035 PF03807 NADP oxidoreductase coenzyme F420-dependent ATY49_10035 PF14748 Pyrroline-5-carboxylate reductase dimerisation ATY49_10085 PF02082 Transcriptional regulator ATY49_10090 PF01458 Uncharacterized protein family (UPF0051) ATY49_10095 PF00005 ABC transporter ATY49_10100 PF01458 Uncharacterized protein family (UPF0051) ATY49_10105 PF00266 Aminotransferase class-V ATY49_10115 PF00355 Rieske [2Fe-2S] domain ATY49_10120 PF01609 Transposase DDE domain ATY49_10120 PF05598 Transposase domain (DUF772) ATY49_10125 PF01527 Transposase ATY49_10130 PF13276 HTH-like domain ATY49_10130 PF13683 Integrase core domain ATY49_10145 PF01053 Cys/Met metabolism PLP-dependent enzyme ATY49_10160 PF00872 Transposase, Mutator family ATY49_10170 PF01527 Transposase ATY49_10175 PF13276 HTH-like domain ATY49_10190 PF00183 Hsp90 protein ATY49_10190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_10195 PF12833 Helix-turn-helix domain ATY49_10220 PF13472 GDSL-like Lipase/Acylhydrolase family ATY49_10220 PF07859 alpha/beta hydrolase fold ATY49_10230 PF03466 LysR substrate binding domain ATY49_10230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY49_10245 PF12848 ABC transporter ATY49_10245 PF00005 ABC transporter ATY49_10250 PF00593 TonB dependent receptor ATY49_10250 PF07715 TonB-dependent Receptor Plug Domain ATY49_10260 PF07715 TonB-dependent Receptor Plug Domain ATY49_10260 PF00593 TonB dependent receptor ATY49_10265 PF07715 TonB-dependent Receptor Plug Domain ATY49_10265 PF00593 TonB dependent receptor ATY49_10275 PF02254 TrkA-N domain ATY49_10275 PF00999 Sodium/hydrogen exchanger family ATY49_10280 PF13276 HTH-like domain ATY49_10280 PF13683 Integrase core domain ATY49_10290 PF00593 TonB dependent receptor ATY49_10290 PF07660 Secretin and TonB N terminus short domain ATY49_10290 PF07715 TonB-dependent Receptor Plug Domain ATY49_10300 PF06276 Ferric iron reductase FhuF-like transporter ATY49_10300 PF04183 IucA / IucC family ATY49_10315 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ATY49_10315 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ATY49_10320 PF02654 Cobalamin-5-phosphate synthase ATY49_10330 PF02277 Phosphoribosyltransferase ATY49_10335 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ATY49_10345 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ATY49_10345 PF12557 Cob(I)alamin adenosyltransferase N terminal ATY49_10365 PF07715 TonB-dependent Receptor Plug Domain ATY49_10365 PF00593 TonB dependent receptor ATY49_10380 PF01527 Transposase ATY49_10395 PF10431 C-terminal, D2-small domain, of ClpB protein ATY49_10395 PF00004 ATPase family associated with various cellular activities (AAA) ATY49_10395 PF02861 Clp amino terminal domain, pathogenicity island component ATY49_10395 PF07724 AAA domain (Cdc48 subfamily) ATY49_10395 PF17871 AAA lid domain ATY49_10400 PF01541 GIY-YIG catalytic domain ATY49_10420 PF01479 S4 domain ATY49_10425 PF01554 MatE ATY49_10430 PF01245 Ribosomal protein L19 ATY49_10435 PF01746 tRNA (Guanine-1)-methyltransferase ATY49_10440 PF05239 PRC-barrel domain ATY49_10440 PF01782 RimM N-terminal domain ATY49_10445 PF00886 Ribosomal protein S16 ATY49_10455 PF03060 Nitronate monooxygenase ATY49_10465 PF02978 Signal peptide binding domain ATY49_10465 PF02881 SRP54-type protein, helical bundle domain ATY49_10465 PF00448 SRP54-type protein, GTPase domain ATY49_10475 PF01578 Cytochrome C assembly protein ATY49_10480 PF01263 Aldose 1-epimerase ATY49_10485 PF06964 Alpha-L-arabinofuranosidase C-terminal domain ATY49_10505 PF05598 Transposase domain (DUF772) ATY49_10520 PF01527 Transposase ATY49_10535 PF07687 Peptidase dimerisation domain ATY49_10535 PF01546 Peptidase family M20/M25/M40 ATY49_10555 PF01636 Phosphotransferase enzyme family ATY49_10560 PF00483 Nucleotidyl transferase ATY49_10565 PF00308 Bacterial dnaA protein ATY49_10570 PF01594 AI-2E family transporter ATY49_10580 PF02769 AIR synthase related protein, C-terminal domain ATY49_10580 PF00586 AIR synthase related protein, N-terminal domain ATY49_10595 PF00551 Formyl transferase ATY49_10615 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ATY49_10620 PF01722 BolA-like protein ATY49_10625 PF00571 CBS domain ATY49_10625 PF01380 SIS domain ATY49_10640 PF03968 OstA-like protein ATY49_10645 PF00005 ABC transporter ATY49_10650 PF04552 Sigma-54, DNA binding domain ATY49_10650 PF04963 Sigma-54 factor, core binding domain ATY49_10650 PF00309 Sigma-54 factor, Activator interacting domain (AID) ATY49_10655 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ATY49_10660 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ATY49_10665 PF07475 HPr Serine kinase C-terminal domain ATY49_10665 PF02603 HPr Serine kinase N terminus ATY49_10670 PF03668 P-loop ATPase protein family ATY49_10680 PF00381 PTS HPr component phosphorylation site ATY49_10685 PF05524 PEP-utilising enzyme, N-terminal ATY49_10685 PF00391 PEP-utilising enzyme, mobile domain ATY49_10685 PF02896 PEP-utilising enzyme, TIM barrel domain ATY49_10690 PF00571 CBS domain ATY49_10690 PF03448 MgtE intracellular N domain ATY49_10690 PF01769 Divalent cation transporter ATY49_10695 PF00756 Putative esterase ATY49_10700 PF02322 Cytochrome bd terminal oxidase subunit II ATY49_10705 PF01654 Cytochrome bd terminal oxidase subunit I ATY49_10715 PF00324 Amino acid permease ATY49_10720 PF00561 alpha/beta hydrolase fold ATY49_10725 PF00196 Bacterial regulatory proteins, luxR family ATY49_10730 PF00324 Amino acid permease ATY49_10750 PF12706 Beta-lactamase superfamily domain ATY49_10785 PF09278 MerR, DNA binding ATY49_10785 PF00376 MerR family regulatory protein ATY49_10805 PF03738 Glutathionylspermidine synthase preATP-grasp ATY49_10830 PF04012 PspA/IM30 family ATY49_10840 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ATY49_10840 PF01243 Pyridoxamine 5'-phosphate oxidase ATY49_10845 PF01202 Shikimate kinase ATY49_10850 PF01761 3-dehydroquinate synthase ATY49_10860 PF01208 Uroporphyrinogen decarboxylase (URO-D) ATY49_10880 PF03377 TAL effector repeat ATY49_10895 PF03377 TAL effector repeat ATY49_10940 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_10970 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_10990 PF03377 TAL effector repeat ATY49_11020 PF05598 Transposase domain (DUF772) ATY49_11020 PF01609 Transposase DDE domain ATY49_11035 PF00872 Transposase, Mutator family ATY49_11045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ATY49_11065 PF01066 CDP-alcohol phosphatidyltransferase ATY49_11070 PF08459 UvrC Helix-hairpin-helix N-terminal ATY49_11070 PF02151 UvrB/uvrC motif ATY49_11070 PF01541 GIY-YIG catalytic domain ATY49_11080 PF01451 Low molecular weight phosphotyrosine protein phosphatase ATY49_11085 PF02348 Cytidylyltransferase ATY49_11090 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ATY49_11095 PF00005 ABC transporter ATY49_11095 PF00664 ABC transporter transmembrane region ATY49_11105 PF01618 MotA/TolQ/ExbB proton channel family ATY49_11110 PF03772 Competence protein ATY49_11110 PF00753 Metallo-beta-lactamase superfamily ATY49_11125 PF00005 ABC transporter ATY49_11130 PF02687 FtsX-like permease family ATY49_11130 PF12704 MacB-like periplasmic core domain ATY49_11140 PF03937 Flavinator of succinate dehydrogenase ATY49_11145 PF13085 2Fe-2S iron-sulfur cluster binding domain ATY49_11155 PF00890 FAD binding domain ATY49_11155 PF02910 Fumarate reductase flavoprotein C-term ATY49_11160 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ATY49_11165 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ATY49_11170 PF01571 Aminomethyltransferase folate-binding domain ATY49_11175 PF17912 MalK OB fold domain ATY49_11175 PF00005 ABC transporter ATY49_11180 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ATY49_11180 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ATY49_11185 PF02685 Glucokinase ATY49_11190 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ATY49_11195 PF00920 Dehydratase family ATY49_11200 PF01081 KDPG and KHG aldolase ATY49_11205 PF05598 Transposase domain (DUF772) ATY49_11235 PF01627 Hpt domain ATY49_11235 PF00672 HAMP domain ATY49_11235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_11235 PF00072 Response regulator receiver domain ATY49_11235 PF00512 His Kinase A (phospho-acceptor) domain ATY49_11235 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ATY49_11245 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_11265 PF00990 Diguanylate cyclase, GGDEF domain ATY49_11265 PF08448 PAS fold ATY49_11295 PF02253 Phospholipase A1 ATY49_11305 PF05681 Fumarate hydratase (Fumerase) ATY49_11305 PF05683 Fumarase C-terminus ATY49_11310 PF00005 ABC transporter ATY49_11315 PF00970 Oxidoreductase FAD-binding domain ATY49_11315 PF00175 Oxidoreductase NAD-binding domain ATY49_11320 PF00255 Glutathione peroxidase ATY49_11340 PF00082 Subtilase family ATY49_11345 PF04542 Sigma-70 region 2 ATY49_11345 PF08281 Sigma-70, region 4 ATY49_11355 PF12802 MarR family ATY49_11380 PF00854 POT family ATY49_11390 PF01915 Glycosyl hydrolase family 3 C-terminal domain ATY49_11390 PF00933 Glycosyl hydrolase family 3 N terminal domain ATY49_11390 PF14310 Fibronectin type III-like domain ATY49_11405 PF00563 EAL domain ATY49_11405 PF01590 GAF domain ATY49_11405 PF00990 Diguanylate cyclase, GGDEF domain ATY49_11405 PF00360 Phytochrome region ATY49_11410 PF00474 Sodium:solute symporter family ATY49_11415 PF01915 Glycosyl hydrolase family 3 C-terminal domain ATY49_11415 PF00933 Glycosyl hydrolase family 3 N terminal domain ATY49_11415 PF14310 Fibronectin type III-like domain ATY49_11435 PF00342 Phosphoglucose isomerase ATY49_11440 PF02261 Aspartate decarboxylase ATY49_11445 PF02569 Pantoate-beta-alanine ligase ATY49_11450 PF02548 Ketopantoate hydroxymethyltransferase ATY49_11455 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ATY49_11460 PF01743 Poly A polymerase head domain ATY49_11460 PF12626 Polymerase A arginine-rich C-terminus ATY49_11460 PF12627 Probable RNA and SrmB- binding site of polymerase A ATY49_11470 PF02649 Type I GTP cyclohydrolase folE2 ATY49_11475 PF01520 N-acetylmuramoyl-L-alanine amidase ATY49_11490 PF01527 Transposase ATY49_11500 PF05598 Transposase domain (DUF772) ATY49_11505 PF00082 Subtilase family ATY49_11505 PF03797 Autotransporter beta-domain ATY49_11510 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ATY49_11515 PF00873 AcrB/AcrD/AcrF family ATY49_11520 PF02321 Outer membrane efflux protein ATY49_11525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_11525 PF00072 Response regulator receiver domain ATY49_11525 PF00512 His Kinase A (phospho-acceptor) domain ATY49_11525 PF13426 PAS domain ATY49_11525 PF08448 PAS fold ATY49_11530 PF00072 Response regulator receiver domain ATY49_11530 PF00196 Bacterial regulatory proteins, luxR family ATY49_11535 PF12951 Passenger-associated-transport-repeat ATY49_11540 PF01527 Transposase ATY49_11550 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ATY49_11555 PF00800 Prephenate dehydratase ATY49_11555 PF01817 Chorismate mutase type II ATY49_11555 PF01842 ACT domain ATY49_11560 PF00266 Aminotransferase class-V ATY49_11565 PF00174 Oxidoreductase molybdopterin binding domain ATY49_11570 PF01794 Ferric reductase like transmembrane component ATY49_11595 PF07702 UTRA domain ATY49_11595 PF00392 Bacterial regulatory proteins, gntR family ATY49_11605 PF07969 Amidohydrolase family ATY49_11610 PF00221 Aromatic amino acid lyase ATY49_11620 PF17391 Urocanase N-terminal domain ATY49_11620 PF17392 Urocanase C-terminal domain ATY49_11620 PF01175 Urocanase Rossmann-like domain ATY49_11635 PF13276 HTH-like domain ATY49_11640 PF01527 Transposase ATY49_11645 PF03989 DNA gyrase C-terminal domain, beta-propeller ATY49_11645 PF00521 DNA gyrase/topoisomerase IV, subunit A ATY49_11650 PF01008 Initiation factor 2 subunit family ATY49_11660 PF00152 tRNA synthetases class II (D, K and N) ATY49_11665 PF12826 Helix-hairpin-helix motif ATY49_11665 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ATY49_11665 PF00533 BRCA1 C Terminus (BRCT) domain ATY49_11665 PF01653 NAD-dependent DNA ligase adenylation domain ATY49_11665 PF03120 NAD-dependent DNA ligase OB-fold domain ATY49_11675 PF04354 ZipA, C-terminal FtsZ-binding domain ATY49_11680 PF02463 RecF/RecN/SMC N terminal domain ATY49_11685 PF01281 Ribosomal protein L9, N-terminal domain ATY49_11685 PF03948 Ribosomal protein L9, C-terminal domain ATY49_11690 PF01084 Ribosomal protein S18 ATY49_11695 PF01250 Ribosomal protein S6 ATY49_11700 PF01521 Iron-sulphur cluster biosynthesis ATY49_11705 PF00152 tRNA synthetases class II (D, K and N) ATY49_11705 PF01336 OB-fold nucleic acid binding domain ATY49_11735 PF00484 Carbonic anhydrase ATY49_11740 PF06052 3-hydroxyanthranilic acid dioxygenase ATY49_11750 PF00266 Aminotransferase class-V ATY49_11755 PF01494 FAD binding domain ATY49_11760 PF00929 Exonuclease ATY49_11760 PF08411 Exonuclease C-terminal ATY49_11770 PF00248 Aldo/keto reductase family ATY49_11785 PF01513 ATP-NAD kinase ATY49_11790 PF10672 S-adenosylmethionine-dependent methyltransferase ATY49_11790 PF01170 Putative RNA methylase family UPF0020 ATY49_11790 PF02926 THUMP domain ATY49_11795 PF00005 ABC transporter ATY49_11795 PF12848 ABC transporter ATY49_11800 PF00005 ABC transporter ATY49_11805 PF00005 ABC transporter ATY49_11835 PF00581 Rhodanese-like domain ATY49_11840 PF00293 NUDIX domain ATY49_11845 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATY49_11845 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ATY49_11850 PF00378 Enoyl-CoA hydratase/isomerase ATY49_11860 PF00730 HhH-GPD superfamily base excision DNA repair protein ATY49_11860 PF00633 Helix-hairpin-helix motif ATY49_11860 PF10576 Iron-sulfur binding domain of endonuclease III ATY49_11870 PF00484 Carbonic anhydrase ATY49_11875 PF05598 Transposase domain (DUF772) ATY49_11875 PF01609 Transposase DDE domain ATY49_11890 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_11905 PF12849 PBP superfamily domain ATY49_11910 PF12849 PBP superfamily domain ATY49_11915 PF00528 Binding-protein-dependent transport system inner membrane component ATY49_11920 PF00528 Binding-protein-dependent transport system inner membrane component ATY49_11925 PF00005 ABC transporter ATY49_11930 PF01895 PhoU domain ATY49_11940 PF00929 Exonuclease ATY49_11955 PF00872 Transposase, Mutator family ATY49_11980 PF00589 Phage integrase family ATY49_11980 PF13495 Phage integrase, N-terminal SAM-like domain ATY49_11985 PF02355 Protein export membrane protein ATY49_11985 PF07549 SecD/SecF GG Motif ATY49_11990 PF02355 Protein export membrane protein ATY49_11990 PF13721 SecD export protein N-terminal TM region ATY49_11990 PF07549 SecD/SecF GG Motif ATY49_11995 PF02699 Preprotein translocase subunit ATY49_12000 PF01702 Queuine tRNA-ribosyltransferase ATY49_12005 PF02547 Queuosine biosynthesis protein ATY49_12040 PF05598 Transposase domain (DUF772) ATY49_12070 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_12090 PF00037 4Fe-4S binding domain ATY49_12105 PF01467 Cytidylyltransferase-like ATY49_12115 PF00183 Hsp90 protein ATY49_12115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_12135 PF00899 ThiF family ATY49_12150 PF05598 Transposase domain (DUF772) ATY49_12170 PF13936 Helix-turn-helix domain ATY49_12170 PF00665 Integrase core domain ATY49_12175 PF05598 Transposase domain (DUF772) ATY49_12175 PF01609 Transposase DDE domain ATY49_12205 PF03453 MoeA N-terminal region (domain I and II) ATY49_12205 PF03454 MoeA C-terminal region (domain IV) ATY49_12205 PF00994 Probable molybdopterin binding domain ATY49_12210 PF01926 50S ribosome-binding GTPase ATY49_12210 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ATY49_12215 PF01011 PQQ enzyme repeat ATY49_12215 PF13360 PQQ-like domain ATY49_12225 PF13464 Domain of unknown function (DUF4115) ATY49_12235 PF04055 Radical SAM superfamily ATY49_12240 PF00334 Nucleoside diphosphate kinase ATY49_12250 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ATY49_12250 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ATY49_12250 PF00378 Enoyl-CoA hydratase/isomerase ATY49_12255 PF00108 Thiolase, N-terminal domain ATY49_12255 PF02803 Thiolase, C-terminal domain ATY49_12260 PF00654 Voltage gated chloride channel ATY49_12270 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ATY49_12280 PF00004 ATPase family associated with various cellular activities (AAA) ATY49_12280 PF16193 AAA C-terminal domain ATY49_12280 PF12002 MgsA AAA+ ATPase C terminal ATY49_12290 PF03548 Outer membrane lipoprotein carrier protein LolA ATY49_12300 PF01580 FtsK/SpoIIIE family ATY49_12300 PF09397 Ftsk gamma domain ATY49_12300 PF17854 FtsK alpha domain ATY49_12300 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ATY49_12305 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY49_12325 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ATY49_12330 PF01176 Translation initiation factor 1A / IF-1 ATY49_12335 PF02861 Clp amino terminal domain, pathogenicity island component ATY49_12335 PF17871 AAA lid domain ATY49_12335 PF00004 ATPase family associated with various cellular activities (AAA) ATY49_12335 PF10431 C-terminal, D2-small domain, of ClpB protein ATY49_12335 PF07724 AAA domain (Cdc48 subfamily) ATY49_12340 PF02617 ATP-dependent Clp protease adaptor protein ClpS ATY49_12345 PF00293 NUDIX domain ATY49_12355 PF04356 Protein of unknown function (DUF489) ATY49_12360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY49_12360 PF12729 Four helix bundle sensory module for signal transduction ATY49_12360 PF00672 HAMP domain ATY49_12375 PF00563 EAL domain ATY49_12375 PF08448 PAS fold ATY49_12375 PF08447 PAS fold ATY49_12375 PF00990 Diguanylate cyclase, GGDEF domain ATY49_12380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_12380 PF07730 Histidine kinase ATY49_12385 PF00563 EAL domain ATY49_12385 PF00990 Diguanylate cyclase, GGDEF domain ATY49_12385 PF03707 Bacterial signalling protein N terminal repeat ATY49_12390 PF13188 PAS domain ATY49_12390 PF00512 His Kinase A (phospho-acceptor) domain ATY49_12390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_12390 PF13426 PAS domain ATY49_12390 PF00989 PAS fold ATY49_12410 PF00072 Response regulator receiver domain ATY49_12410 PF01584 CheW-like domain ATY49_12420 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATY49_12420 PF00460 Flagella basal body rod protein ATY49_12425 PF03963 Flagellar hook capping protein - N-terminal region ATY49_12430 PF07559 Flagellar basal body protein FlaE ATY49_12430 PF00460 Flagella basal body rod protein ATY49_12430 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATY49_12435 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATY49_12435 PF00460 Flagella basal body rod protein ATY49_12440 PF00460 Flagella basal body rod protein ATY49_12440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATY49_12445 PF02107 Flagellar L-ring protein ATY49_12450 PF02119 Flagellar P-ring protein ATY49_12455 PF10135 Rod binding protein ATY49_12455 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ATY49_12460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATY49_12460 PF07196 Flagellin hook IN motif ATY49_12470 PF00669 Bacterial flagellin N-terminal helical region ATY49_12470 PF00700 Bacterial flagellin C-terminal helical region ATY49_12475 PF02465 Flagellar hook-associated protein 2 N-terminus ATY49_12475 PF07195 Flagellar hook-associated protein 2 C-terminus ATY49_12475 PF07196 Flagellin hook IN motif ATY49_12480 PF02561 Flagellar protein FliS ATY49_12495 PF00196 Bacterial regulatory proteins, luxR family ATY49_12495 PF00072 Response regulator receiver domain ATY49_12500 PF00309 Sigma-54 factor, Activator interacting domain (AID) ATY49_12500 PF04963 Sigma-54 factor, core binding domain ATY49_12500 PF04552 Sigma-54, DNA binding domain ATY49_12505 PF01339 CheB methylesterase ATY49_12505 PF00072 Response regulator receiver domain ATY49_12510 PF02954 Bacterial regulatory protein, Fis family ATY49_12510 PF00072 Response regulator receiver domain ATY49_12510 PF00158 Sigma-54 interaction domain ATY49_12515 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ATY49_12525 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ATY49_12525 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ATY49_12560 PF00535 Glycosyl transferase family 2 ATY49_12560 PF00534 Glycosyl transferases group 1 ATY49_12565 PF02049 Flagellar hook-basal body complex protein FliE ATY49_12570 PF01514 Secretory protein of YscJ/FliF family ATY49_12570 PF08345 Flagellar M-ring protein C-terminal ATY49_12575 PF14842 FliG N-terminal domain ATY49_12575 PF01706 FliG C-terminal domain ATY49_12575 PF14841 FliG middle domain ATY49_12585 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATY49_12585 PF18269 T3SS EscN ATPase C-terminal domain ATY49_12605 PF02154 Flagellar motor switch protein FliM ATY49_12605 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ATY49_12610 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ATY49_12615 PF04347 Flagellar biosynthesis protein, FliO ATY49_12620 PF00813 FliP family ATY49_12625 PF01313 Bacterial export proteins, family 3 ATY49_12630 PF01311 Bacterial export proteins, family 1 ATY49_12635 PF00563 EAL domain ATY49_12635 PF03707 Bacterial signalling protein N terminal repeat ATY49_12635 PF13188 PAS domain ATY49_12635 PF00990 Diguanylate cyclase, GGDEF domain ATY49_12640 PF13188 PAS domain ATY49_12640 PF03707 Bacterial signalling protein N terminal repeat ATY49_12640 PF00990 Diguanylate cyclase, GGDEF domain ATY49_12640 PF00563 EAL domain ATY49_12645 PF00563 EAL domain ATY49_12645 PF00990 Diguanylate cyclase, GGDEF domain ATY49_12645 PF03707 Bacterial signalling protein N terminal repeat ATY49_12650 PF01312 FlhB HrpN YscU SpaS Family ATY49_12655 PF00771 FHIPEP family ATY49_12660 PF00448 SRP54-type protein, GTPase domain ATY49_12665 PF10609 NUBPL iron-transfer P-loop NTPase ATY49_12670 PF04542 Sigma-70 region 2 ATY49_12670 PF04545 Sigma-70, region 4 ATY49_12670 PF04539 Sigma-70 region 3 ATY49_12675 PF00072 Response regulator receiver domain ATY49_12680 PF04344 Chemotaxis phosphatase, CheZ ATY49_12685 PF07194 P2 response regulator binding domain ATY49_12685 PF01627 Hpt domain ATY49_12685 PF01584 CheW-like domain ATY49_12685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_12685 PF02895 Signal transducing histidine kinase, homodimeric domain ATY49_12700 PF13936 Helix-turn-helix domain ATY49_12700 PF00665 Integrase core domain ATY49_12715 PF05598 Transposase domain (DUF772) ATY49_12715 PF01609 Transposase DDE domain ATY49_12720 PF05593 RHS Repeat ATY49_12720 PF03527 RHS protein ATY49_12730 PF01609 Transposase DDE domain ATY49_12730 PF05598 Transposase domain (DUF772) ATY49_12740 PF05598 Transposase domain (DUF772) ATY49_12740 PF01609 Transposase DDE domain ATY49_12765 PF00873 AcrB/AcrD/AcrF family ATY49_12785 PF00034 Cytochrome c ATY49_12835 PF05598 Transposase domain (DUF772) ATY49_12835 PF01609 Transposase DDE domain ATY49_12840 PF00664 ABC transporter transmembrane region ATY49_12840 PF00005 ABC transporter ATY49_12845 PF00005 ABC transporter ATY49_12845 PF00664 ABC transporter transmembrane region ATY49_12850 PF01654 Cytochrome bd terminal oxidase subunit I ATY49_12855 PF01654 Cytochrome bd terminal oxidase subunit I ATY49_12860 PF02322 Cytochrome bd terminal oxidase subunit II ATY49_12880 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ATY49_12880 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ATY49_12885 PF00171 Aldehyde dehydrogenase family ATY49_12890 PF00696 Amino acid kinase family ATY49_12890 PF01472 PUA domain ATY49_12905 PF00206 Lyase ATY49_12910 PF01118 Semialdehyde dehydrogenase, NAD binding domain ATY49_12920 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase ATY49_12920 PF00696 Amino acid kinase family ATY49_12925 PF01546 Peptidase family M20/M25/M40 ATY49_12925 PF07687 Peptidase dimerisation domain ATY49_12935 PF00764 Arginosuccinate synthase ATY49_12940 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ATY49_12940 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ATY49_12950 PF01406 tRNA synthetases class I (C) catalytic domain ATY49_12950 PF09190 DALR domain ATY49_12955 PF02657 Fe-S metabolism associated domain ATY49_12970 PF01258 Prokaryotic dksA/traR C4-type zinc finger ATY49_12980 PF01809 Putative membrane protein insertion efficiency factor ATY49_12985 PF01979 Amidohydrolase family ATY49_12990 PF01551 Peptidase family M23 ATY49_12990 PF08460 Bacterial SH3 domain ATY49_12995 PF05985 Ethanolamine ammonia-lyase light chain (EutC) ATY49_13000 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_13025 PF05598 Transposase domain (DUF772) ATY49_13025 PF01609 Transposase DDE domain ATY49_13035 PF01095 Pectinesterase ATY49_13055 PF00295 Glycosyl hydrolases family 28 ATY49_13065 PF13419 Haloacid dehalogenase-like hydrolase ATY49_13075 PF01979 Amidohydrolase family ATY49_13085 PF08207 Elongation factor P (EF-P) KOW-like domain ATY49_13085 PF09285 Elongation factor P, C-terminal ATY49_13085 PF01132 Elongation factor P (EF-P) OB domain ATY49_13090 PF04055 Radical SAM superfamily ATY49_13095 PF13188 PAS domain ATY49_13095 PF03707 Bacterial signalling protein N terminal repeat ATY49_13095 PF00563 EAL domain ATY49_13095 PF00990 Diguanylate cyclase, GGDEF domain ATY49_13105 PF00588 SpoU rRNA Methylase family ATY49_13110 PF00459 Inositol monophosphatase family ATY49_13115 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ATY49_13115 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ATY49_13120 PF00545 ribonuclease ATY49_13140 PF00271 Helicase conserved C-terminal domain ATY49_13140 PF00270 DEAD/DEAH box helicase ATY49_13140 PF03880 DbpA RNA binding domain ATY49_13145 PF00156 Phosphoribosyl transferase domain ATY49_13150 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ATY49_13160 PF02798 Glutathione S-transferase, N-terminal domain ATY49_13160 PF14497 Glutathione S-transferase, C-terminal domain ATY49_13165 PF00313 'Cold-shock' DNA-binding domain ATY49_13170 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ATY49_13175 PF07152 YaeQ protein ATY49_13185 PF00563 EAL domain ATY49_13185 PF00990 Diguanylate cyclase, GGDEF domain ATY49_13185 PF00072 Response regulator receiver domain ATY49_13190 PF01435 Peptidase family M48 ATY49_13195 PF00749 tRNA synthetases class I (E and Q), catalytic domain ATY49_13200 PF00106 short chain dehydrogenase ATY49_13205 PF05233 PHB accumulation regulatory domain ATY49_13205 PF07879 PHB/PHA accumulation regulator DNA-binding domain ATY49_13220 PF01119 DNA mismatch repair protein, C-terminal domain ATY49_13220 PF08676 MutL C terminal dimerisation domain ATY49_13225 PF01520 N-acetylmuramoyl-L-alanine amidase ATY49_13225 PF11741 AMIN domain ATY49_13230 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ATY49_13235 PF01256 Carbohydrate kinase ATY49_13235 PF03853 YjeF-related protein N-terminus ATY49_13240 PF08331 Domain of unknown function (DUF1730) ATY49_13250 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_13255 PF13742 OB-fold nucleic acid binding domain ATY49_13255 PF02601 Exonuclease VII, large subunit ATY49_13270 PF03781 Sulfatase-modifying factor enzyme 1 ATY49_13275 PF01612 3'-5' exonuclease ATY49_13275 PF00570 HRDC domain ATY49_13315 PF00171 Aldehyde dehydrogenase family ATY49_13315 PF14850 DNA-binding domain of Proline dehydrogenase ATY49_13315 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ATY49_13315 PF01619 Proline dehydrogenase ATY49_13320 PF00872 Transposase, Mutator family ATY49_13350 PF04386 Stringent starvation protein B ATY49_13355 PF00043 Glutathione S-transferase, C-terminal domain ATY49_13355 PF02798 Glutathione S-transferase, N-terminal domain ATY49_13360 PF02167 Cytochrome C1 family ATY49_13365 PF00032 Cytochrome b(C-terminal)/b6/petD ATY49_13365 PF00033 Cytochrome b/b6/petB ATY49_13370 PF00355 Rieske [2Fe-2S] domain ATY49_13370 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ATY49_13375 PF01464 Transglycosylase SLT domain ATY49_13395 PF00919 Uncharacterized protein family UPF0004 ATY49_13395 PF04055 Radical SAM superfamily ATY49_13395 PF01938 TRAM domain ATY49_13400 PF02562 PhoH-like protein ATY49_13410 PF02130 Uncharacterized protein family UPF0054 ATY49_13420 PF03471 Transporter associated domain ATY49_13420 PF00571 CBS domain ATY49_13435 PF00171 Aldehyde dehydrogenase family ATY49_13445 PF00528 Binding-protein-dependent transport system inner membrane component ATY49_13460 PF02321 Outer membrane efflux protein ATY49_13465 PF07690 Major Facilitator Superfamily ATY49_13470 PF13533 Biotin-lipoyl like ATY49_13480 PF00120 Glutamine synthetase, catalytic domain ATY49_13490 PF00120 Glutamine synthetase, catalytic domain ATY49_13495 PF01266 FAD dependent oxidoreductase ATY49_13500 PF00990 Diguanylate cyclase, GGDEF domain ATY49_13500 PF00072 Response regulator receiver domain ATY49_13505 PF00083 Sugar (and other) transporter ATY49_13505 PF07690 Major Facilitator Superfamily ATY49_13515 PF00384 Molybdopterin oxidoreductase ATY49_13520 PF02634 FdhD/NarQ family ATY49_13525 PF07690 Major Facilitator Superfamily ATY49_13535 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_13545 PF00202 Aminotransferase class-III ATY49_13550 PF00005 ABC transporter ATY49_13560 PF04286 Protein of unknown function (DUF445) ATY49_13565 PF00672 HAMP domain ATY49_13565 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ATY49_13565 PF00072 Response regulator receiver domain ATY49_13565 PF00512 His Kinase A (phospho-acceptor) domain ATY49_13565 PF01627 Hpt domain ATY49_13565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_13570 PF00072 Response regulator receiver domain ATY49_13575 PF01609 Transposase DDE domain ATY49_13575 PF05598 Transposase domain (DUF772) ATY49_13590 PF00529 HlyD membrane-fusion protein of T1SS ATY49_13590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ATY49_13595 PF00873 AcrB/AcrD/AcrF family ATY49_13610 PF13006 Insertion element 4 transposase N-terminal ATY49_13610 PF01609 Transposase DDE domain ATY49_13615 PF00356 Bacterial regulatory proteins, lacI family ATY49_13620 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ATY49_13620 PF05524 PEP-utilising enzyme, N-terminal ATY49_13620 PF00391 PEP-utilising enzyme, mobile domain ATY49_13620 PF00381 PTS HPr component phosphorylation site ATY49_13620 PF02896 PEP-utilising enzyme, TIM barrel domain ATY49_13625 PF00294 pfkB family carbohydrate kinase ATY49_13630 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ATY49_13645 PF01609 Transposase DDE domain ATY49_13645 PF05598 Transposase domain (DUF772) ATY49_13690 PF16671 Actin cross-linking domain ATY49_13690 PF04717 Type VI secretion system, phage-baseplate injector ATY49_13700 PF00665 Integrase core domain ATY49_13700 PF13333 Integrase core domain ATY49_13700 PF13276 HTH-like domain ATY49_13710 PF16671 Actin cross-linking domain ATY49_13710 PF04717 Type VI secretion system, phage-baseplate injector ATY49_13765 PF00593 TonB dependent receptor ATY49_13765 PF07715 TonB-dependent Receptor Plug Domain ATY49_13775 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ATY49_13775 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ATY49_13795 PF01618 MotA/TolQ/ExbB proton channel family ATY49_13800 PF00691 OmpA family ATY49_13800 PF13677 Membrane MotB of proton-channel complex MotA/MotB ATY49_13805 PF13614 AAA domain ATY49_13810 PF01584 CheW-like domain ATY49_13820 PF00072 Response regulator receiver domain ATY49_13825 PF01627 Hpt domain ATY49_13825 PF01584 CheW-like domain ATY49_13825 PF02895 Signal transducing histidine kinase, homodimeric domain ATY49_13825 PF09078 CheY binding ATY49_13825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_13850 PF00672 HAMP domain ATY49_13850 PF02203 Tar ligand binding domain homologue ATY49_13850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY49_13860 PF00672 HAMP domain ATY49_13860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY49_13860 PF02203 Tar ligand binding domain homologue ATY49_13865 PF00672 HAMP domain ATY49_13865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY49_13865 PF02203 Tar ligand binding domain homologue ATY49_13870 PF00672 HAMP domain ATY49_13870 PF02203 Tar ligand binding domain homologue ATY49_13870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY49_13875 PF00672 HAMP domain ATY49_13875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY49_13875 PF02203 Tar ligand binding domain homologue ATY49_13880 PF00672 HAMP domain ATY49_13880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY49_13880 PF02203 Tar ligand binding domain homologue ATY49_13885 PF07238 PilZ domain ATY49_13885 PF07317 Flagellar regulator YcgR ATY49_13890 PF01584 CheW-like domain ATY49_13915 PF00672 HAMP domain ATY49_13915 PF02203 Tar ligand binding domain homologue ATY49_13915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY49_13920 PF01739 CheR methyltransferase, SAM binding domain ATY49_13920 PF03705 CheR methyltransferase, all-alpha domain ATY49_13925 PF03975 CheD chemotactic sensory transduction ATY49_13930 PF01339 CheB methylesterase ATY49_13930 PF00072 Response regulator receiver domain ATY49_13935 PF03707 Bacterial signalling protein N terminal repeat ATY49_13935 PF00563 EAL domain ATY49_13935 PF00990 Diguanylate cyclase, GGDEF domain ATY49_13940 PF00561 alpha/beta hydrolase fold ATY49_13945 PF11791 Aconitate B N-terminal domain ATY49_13945 PF06434 Aconitate hydratase 2 N-terminus ATY49_13945 PF00330 Aconitase family (aconitate hydratase) ATY49_13960 PF00694 Aconitase C-terminal domain ATY49_13960 PF00330 Aconitase family (aconitate hydratase) ATY49_13970 PF13193 AMP-binding enzyme C-terminal domain ATY49_13970 PF00501 AMP-binding enzyme ATY49_13975 PF00378 Enoyl-CoA hydratase/isomerase ATY49_13980 PF00072 Response regulator receiver domain ATY49_13980 PF01627 Hpt domain ATY49_13980 PF00512 His Kinase A (phospho-acceptor) domain ATY49_13980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_13990 PF00072 Response regulator receiver domain ATY49_13995 PF00152 tRNA synthetases class II (D, K and N) ATY49_13995 PF01336 OB-fold nucleic acid binding domain ATY49_14000 PF03462 PCRF domain ATY49_14000 PF00472 RF-1 domain ATY49_14015 PF01610 Transposase ATY49_14015 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 ATY49_14015 PF13542 Helix-turn-helix domain of transposase family ISL3 ATY49_14030 PF01368 DHH family ATY49_14030 PF17768 RecJ OB domain ATY49_14030 PF02272 DHHA1 domain ATY49_14040 PF01272 Transcription elongation factor, GreA/GreB, C-term ATY49_14040 PF03449 Transcription elongation factor, N-terminal ATY49_14045 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ATY49_14045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ATY49_14045 PF02142 MGS-like domain ATY49_14055 PF00117 Glutamine amidotransferase class-I ATY49_14055 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ATY49_14060 PF05173 Dihydrodipicolinate reductase, C-terminus ATY49_14060 PF01113 Dihydrodipicolinate reductase, N-terminus ATY49_14070 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_14075 PF03473 MOSC domain ATY49_14075 PF03475 3-alpha domain ATY49_14080 PF00155 Aminotransferase class I and II ATY49_14100 PF07670 Nucleoside recognition ATY49_14100 PF07664 Ferrous iron transport protein B C terminus ATY49_14100 PF02421 Ferrous iron transport protein B ATY49_14110 PF00378 Enoyl-CoA hydratase/isomerase ATY49_14120 PF00682 HMGL-like ATY49_14125 PF00106 short chain dehydrogenase ATY49_14130 PF09285 Elongation factor P, C-terminal ATY49_14130 PF01132 Elongation factor P (EF-P) OB domain ATY49_14130 PF08207 Elongation factor P (EF-P) KOW-like domain ATY49_14145 PF13936 Helix-turn-helix domain ATY49_14145 PF00665 Integrase core domain ATY49_14155 PF00083 Sugar (and other) transporter ATY49_14165 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ATY49_14165 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ATY49_14180 PF01055 Glycosyl hydrolases family 31 ATY49_14180 PF17137 Domain of unknown function (DUF5110) ATY49_14180 PF16338 Domain of unknown function (DUF4968) ATY49_14190 PF03466 LysR substrate binding domain ATY49_14190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY49_14195 PF01081 KDPG and KHG aldolase ATY49_14200 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ATY49_14200 PF13378 Enolase C-terminal domain-like ATY49_14205 PF08450 SMP-30/Gluconolactonase/LRE-like region ATY49_14210 PF05035 2-keto-3-deoxy-galactonokinase ATY49_14215 PF11953 Domain of unknown function (DUF3470) ATY49_14215 PF00037 4Fe-4S binding domain ATY49_14225 PF00701 Dihydrodipicolinate synthetase family ATY49_14240 PF00578 AhpC/TSA family ATY49_14245 PF13638 PIN domain ATY49_14245 PF02562 PhoH-like protein ATY49_14255 PF08543 Phosphomethylpyrimidine kinase ATY49_14285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY49_14285 PF03466 LysR substrate binding domain ATY49_14290 PF02678 Pirin ATY49_14290 PF17954 Quercetinase C-terminal cupin domain ATY49_14315 PF00772 DnaB-like helicase N terminal domain ATY49_14315 PF03796 DnaB-like helicase C terminal domain ATY49_14335 PF02599 Global regulator protein family ATY49_14340 PF01411 tRNA synthetases class II (A) ATY49_14340 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ATY49_14340 PF02272 DHHA1 domain ATY49_14345 PF02631 RecX family ATY49_14350 PF00154 recA bacterial DNA recombination protein ATY49_14355 PF00717 Peptidase S24-like ATY49_14355 PF01726 LexA DNA binding domain ATY49_14360 PF03109 ABC1 family ATY49_14365 PF02464 Competence-damaged protein ATY49_14370 PF01926 50S ribosome-binding GTPase ATY49_14370 PF13167 GTP-binding GTPase N-terminal ATY49_14370 PF16360 GTP-binding GTPase Middle Region ATY49_14375 PF17209 Hfq protein ATY49_14385 PF00809 Pterin binding enzyme ATY49_14390 PF17862 AAA+ lid domain ATY49_14390 PF06480 FtsH Extracellular ATY49_14390 PF01434 Peptidase family M41 ATY49_14390 PF00004 ATPase family associated with various cellular activities (AAA) ATY49_14395 PF01728 FtsJ-like methyltransferase ATY49_14400 PF01985 CRS1 / YhbY (CRM) domain ATY49_14410 PF01551 Peptidase family M23 ATY49_14410 PF01476 LysM domain ATY49_14415 PF09335 SNARE associated Golgi protein ATY49_14425 PF01975 Survival protein SurE ATY49_14430 PF01713 Smr domain ATY49_14435 PF01142 tRNA pseudouridine synthase D (TruD) ATY49_14440 PF02542 YgbB family ATY49_14445 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ATY49_14450 PF04977 Septum formation initiator ATY49_14455 PF03952 Enolase, N-terminal domain ATY49_14455 PF00113 Enolase, C-terminal TIM barrel domain ATY49_14465 PF00793 DAHP synthetase I family ATY49_14470 PF00117 Glutamine amidotransferase class-I ATY49_14470 PF06418 CTP synthase N-terminus ATY49_14480 PF01751 Toprim domain ATY49_14480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_14480 PF00986 DNA gyrase B subunit, carboxyl terminus ATY49_14480 PF00204 DNA gyrase B ATY49_14500 PF02698 DUF218 domain ATY49_14505 PF01384 Phosphate transporter family ATY49_14515 PF00571 CBS domain ATY49_14515 PF01595 Cyclin M transmembrane N-terminal domain ATY49_14515 PF03471 Transporter associated domain ATY49_14530 PF00296 Luciferase-like monooxygenase ATY49_14535 PF07690 Major Facilitator Superfamily ATY49_14540 PF00664 ABC transporter transmembrane region ATY49_14540 PF00005 ABC transporter ATY49_14545 PF00005 ABC transporter ATY49_14565 PF13579 Glycosyl transferase 4-like domain ATY49_14565 PF00534 Glycosyl transferases group 1 ATY49_14585 PF08241 Methyltransferase domain ATY49_14600 PF00535 Glycosyl transferase family 2 ATY49_14605 PF01943 Polysaccharide biosynthesis protein ATY49_14610 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ATY49_14630 PF05523 WxcM-like, C-terminal ATY49_14645 PF00034 Cytochrome c ATY49_14655 PF08281 Sigma-70, region 4 ATY49_14655 PF04542 Sigma-70 region 2 ATY49_14665 PF00082 Subtilase family ATY49_14670 PF01578 Cytochrome C assembly protein ATY49_14675 PF04995 Heme exporter protein D (CcmD) ATY49_14680 PF03100 CcmE ATY49_14685 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ATY49_14685 PF01578 Cytochrome C assembly protein ATY49_14690 PF08534 Redoxin ATY49_14695 PF03918 Cytochrome C biogenesis protein ATY49_14705 PF03377 TAL effector repeat ATY49_14735 PF03377 TAL effector repeat ATY49_14740 PF00873 AcrB/AcrD/AcrF family ATY49_14750 PF00873 AcrB/AcrD/AcrF family ATY49_14755 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ATY49_14755 PF00529 HlyD membrane-fusion protein of T1SS ATY49_14785 PF01527 Transposase ATY49_14790 PF13276 HTH-like domain ATY49_14800 PF13700 Domain of unknown function (DUF4158) ATY49_14800 PF01526 Tn3 transposase DDE domain ATY49_14805 PF00486 Transcriptional regulatory protein, C terminal ATY49_14805 PF00072 Response regulator receiver domain ATY49_14810 PF03150 Di-haem cytochrome c peroxidase ATY49_14810 PF00034 Cytochrome c ATY49_14815 PF00512 His Kinase A (phospho-acceptor) domain ATY49_14815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_14820 PF03466 LysR substrate binding domain ATY49_14820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY49_14850 PF00069 Protein kinase domain ATY49_14890 PF16671 Actin cross-linking domain ATY49_14890 PF04717 Type VI secretion system, phage-baseplate injector ATY49_14900 PF05598 Transposase domain (DUF772) ATY49_14900 PF01609 Transposase DDE domain ATY49_14910 PF00004 ATPase family associated with various cellular activities (AAA) ATY49_14910 PF17871 AAA lid domain ATY49_14910 PF10431 C-terminal, D2-small domain, of ClpB protein ATY49_14910 PF07724 AAA domain (Cdc48 subfamily) ATY49_14935 PF05638 Type VI secretion system effector, Hcp ATY49_14955 PF05598 Transposase domain (DUF772) ATY49_14955 PF01609 Transposase DDE domain ATY49_14970 PF05598 Transposase domain (DUF772) ATY49_14970 PF01609 Transposase DDE domain ATY49_15005 PF13683 Integrase core domain ATY49_15005 PF13276 HTH-like domain ATY49_15015 PF01106 NifU-like domain ATY49_15020 PF01329 Pterin 4 alpha carbinolamine dehydratase ATY49_15030 PF02535 ZIP Zinc transporter ATY49_15035 PF02535 ZIP Zinc transporter ATY49_15045 PF00849 RNA pseudouridylate synthase ATY49_15045 PF01479 S4 domain ATY49_15050 PF10150 Ribonuclease E/G family ATY49_15050 PF00575 S1 RNA binding domain ATY49_15050 PF12111 Polyribonucleotide phosphorylase C terminal ATY49_15060 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_15065 PF00196 Bacterial regulatory proteins, luxR family ATY49_15065 PF00072 Response regulator receiver domain ATY49_15075 PF01609 Transposase DDE domain ATY49_15075 PF05598 Transposase domain (DUF772) ATY49_15085 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATY49_15095 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ATY49_15095 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ATY49_15095 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ATY49_15105 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ATY49_15105 PF01648 4'-phosphopantetheinyl transferase superfamily ATY49_15135 PF05598 Transposase domain (DUF772) ATY49_15135 PF01609 Transposase DDE domain ATY49_15165 PF00072 Response regulator receiver domain ATY49_15165 PF03861 ANTAR domain ATY49_15175 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ATY49_15175 PF14824 Sirohaem biosynthesis protein central ATY49_15175 PF10414 Sirohaem synthase dimerisation region ATY49_15200 PF12804 MobA-like NTP transferase domain ATY49_15205 PF00994 Probable molybdopterin binding domain ATY49_15205 PF03454 MoeA C-terminal region (domain IV) ATY49_15205 PF03453 MoeA N-terminal region (domain I and II) ATY49_15265 PF00593 TonB dependent receptor ATY49_15265 PF07715 TonB-dependent Receptor Plug Domain ATY49_15285 PF04616 Glycosyl hydrolases family 43 ATY49_15290 PF07532 Bacterial Ig-like domain (group 4) ATY49_15295 PF00593 TonB dependent receptor ATY49_15295 PF07715 TonB-dependent Receptor Plug Domain ATY49_15305 PF00082 Subtilase family ATY49_15305 PF09286 Pro-kumamolisin, activation domain ATY49_15345 PF13520 Amino acid permease ATY49_15360 PF01321 Creatinase/Prolidase N-terminal domain ATY49_15360 PF00557 Metallopeptidase family M24 ATY49_15365 PF00171 Aldehyde dehydrogenase family ATY49_15370 PF00701 Dihydrodipicolinate synthetase family ATY49_15375 PF04324 BFD-like [2Fe-2S] binding domain ATY49_15375 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY49_15385 PF01266 FAD dependent oxidoreductase ATY49_15390 PF05544 Proline racemase ATY49_15400 PF02881 SRP54-type protein, helical bundle domain ATY49_15400 PF00448 SRP54-type protein, GTPase domain ATY49_15410 PF00633 Helix-hairpin-helix motif ATY49_15410 PF00730 HhH-GPD superfamily base excision DNA repair protein ATY49_15410 PF14815 NUDIX domain ATY49_15415 PF04362 Bacterial Fe(2+) trafficking ATY49_15420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_15420 PF00072 Response regulator receiver domain ATY49_15420 PF13426 PAS domain ATY49_15430 PF05598 Transposase domain (DUF772) ATY49_15530 PF03808 Glycosyl transferase WecB/TagA/CpsF family ATY49_15545 PF14667 Polysaccharide biosynthesis C-terminal domain ATY49_15555 PF00534 Glycosyl transferases group 1 ATY49_15555 PF13439 Glycosyltransferase Family 4 ATY49_15575 PF02397 Bacterial sugar transferase ATY49_15595 PF13411 MerR HTH family regulatory protein ATY49_15600 PF00216 Bacterial DNA-binding protein ATY49_15605 PF03484 tRNA synthetase B5 domain ATY49_15605 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ATY49_15605 PF03483 B3/4 domain ATY49_15605 PF03147 Ferredoxin-fold anticodon binding domain ATY49_15605 PF01588 Putative tRNA binding domain ATY49_15610 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ATY49_15610 PF01409 tRNA synthetases class II core domain (F) ATY49_15615 PF00453 Ribosomal protein L20 ATY49_15620 PF01632 Ribosomal protein L35 ATY49_15625 PF00707 Translation initiation factor IF-3, C-terminal domain ATY49_15625 PF05198 Translation initiation factor IF-3, N-terminal domain ATY49_15630 PF02824 TGS domain ATY49_15630 PF03129 Anticodon binding domain ATY49_15630 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ATY49_15630 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ATY49_15640 PF01527 Transposase ATY49_15660 PF04851 Type III restriction enzyme, res subunit ATY49_15660 PF17757 UvrB interaction domain ATY49_15660 PF00271 Helicase conserved C-terminal domain ATY49_15660 PF02151 UvrB/uvrC motif ATY49_15660 PF12344 Ultra-violet resistance protein B ATY49_15665 PF00114 Pilin (bacterial filament) ATY49_15665 PF07963 Prokaryotic N-terminal methylation motif ATY49_15675 PF00114 Pilin (bacterial filament) ATY49_15675 PF07963 Prokaryotic N-terminal methylation motif ATY49_15700 PF07963 Prokaryotic N-terminal methylation motif ATY49_15700 PF12019 Type II transport protein GspH ATY49_15705 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ATY49_15705 PF11892 Domain of unknown function (DUF3412) ATY49_15705 PF03641 Possible lysine decarboxylase ATY49_15710 PF00593 TonB dependent receptor ATY49_15715 PF01914 MarC family integral membrane protein ATY49_15725 PF00462 Glutaredoxin ATY49_15730 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ATY49_15730 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ATY49_15735 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ATY49_15735 PF02222 ATP-grasp domain ATY49_15740 PF00731 AIR carboxylase ATY49_15750 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ATY49_15750 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ATY49_15760 PF00575 S1 RNA binding domain ATY49_15760 PF03725 3' exoribonuclease family, domain 2 ATY49_15760 PF01138 3' exoribonuclease family, domain 1 ATY49_15760 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ATY49_15760 PF00013 KH domain ATY49_15765 PF00312 Ribosomal protein S15 ATY49_15770 PF16198 tRNA pseudouridylate synthase B C-terminal domain ATY49_15770 PF09157 Pseudouridine synthase II TruB, C-terminal ATY49_15770 PF01509 TruB family pseudouridylate synthase (N terminal domain) ATY49_15775 PF02033 Ribosome-binding factor A ATY49_15780 PF00009 Elongation factor Tu GTP binding domain ATY49_15780 PF11987 Translation-initiation factor 2 ATY49_15780 PF04760 Translation initiation factor IF-2, N-terminal region ATY49_15780 PF08364 Bacterial translation initiation factor IF-2 associated region ATY49_15785 PF00575 S1 RNA binding domain ATY49_15785 PF08529 NusA N-terminal domain ATY49_15785 PF13184 NusA-like KH domain ATY49_15790 PF02576 RimP N-terminal domain ATY49_15790 PF17384 RimP C-terminal SH3 domain ATY49_15800 PF00361 Proton-conducting membrane transporter ATY49_15805 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus ATY49_15805 PF00361 Proton-conducting membrane transporter ATY49_15810 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ATY49_15810 PF00361 Proton-conducting membrane transporter ATY49_15815 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ATY49_15820 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ATY49_15825 PF12838 4Fe-4S dicluster domain ATY49_15830 PF00146 NADH dehydrogenase ATY49_15835 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal ATY49_15835 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ATY49_15835 PF00384 Molybdopterin oxidoreductase ATY49_15840 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ATY49_15840 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ATY49_15840 PF10531 SLBB domain ATY49_15850 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ATY49_15855 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ATY49_15860 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ATY49_15865 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ATY49_15880 PF00121 Triosephosphate isomerase ATY49_15900 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_15915 PF03707 Bacterial signalling protein N terminal repeat ATY49_15915 PF00990 Diguanylate cyclase, GGDEF domain ATY49_15915 PF00563 EAL domain ATY49_15930 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ATY49_15930 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ATY49_15930 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ATY49_15930 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ATY49_15935 PF17848 Acetyl-coA carboxylase zinc finger domain ATY49_15935 PF01039 Carboxyl transferase domain ATY49_15940 PF00290 Tryptophan synthase alpha chain ATY49_15950 PF00291 Pyridoxal-phosphate dependent enzyme ATY49_15955 PF03466 LysR substrate binding domain ATY49_15955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY49_15960 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ATY49_15965 PF01416 tRNA pseudouridine synthase ATY49_15980 PF01118 Semialdehyde dehydrogenase, NAD binding domain ATY49_15980 PF02774 Semialdehyde dehydrogenase, dimerisation domain ATY49_15985 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ATY49_15985 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATY49_15990 PF01264 Chorismate synthase ATY49_15995 PF05175 Methyltransferase small domain ATY49_16000 PF02630 SCO1/SenC ATY49_16005 PF02666 Phosphatidylserine decarboxylase ATY49_16015 PF05872 Bacterial protein of unknown function (DUF853) ATY49_16020 PF00665 Integrase core domain ATY49_16020 PF13936 Helix-turn-helix domain ATY49_16035 PF03449 Transcription elongation factor, N-terminal ATY49_16035 PF01272 Transcription elongation factor, GreA/GreB, C-term ATY49_16040 PF00919 Uncharacterized protein family UPF0004 ATY49_16040 PF18693 TRAM domain ATY49_16040 PF04055 Radical SAM superfamily ATY49_16045 PF01738 Dienelactone hydrolase family ATY49_16060 PF00692 dUTPase ATY49_16065 PF10609 NUBPL iron-transfer P-loop NTPase ATY49_16100 PF01266 FAD dependent oxidoreductase ATY49_16105 PF04235 Protein of unknown function (DUF418) ATY49_16110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATY49_16115 PF00877 NlpC/P60 family ATY49_16120 PF00877 NlpC/P60 family ATY49_16135 PF00375 Sodium:dicarboxylate symporter family ATY49_16140 PF00245 Alkaline phosphatase ATY49_16145 PF09179 TilS substrate binding domain ATY49_16145 PF11734 TilS substrate C-terminal domain ATY49_16145 PF01171 PP-loop family ATY49_16150 PF02609 Exonuclease VII small subunit ATY49_16155 PF00348 Polyprenyl synthetase ATY49_16175 PF01523 Putative modulator of DNA gyrase ATY49_16180 PF04751 Protein of unknown function (DUF615) ATY49_16185 PF01523 Putative modulator of DNA gyrase ATY49_16195 PF13502 AsmA-like C-terminal region ATY49_16195 PF13116 Protein of unknown function ATY49_16200 PF10150 Ribonuclease E/G family ATY49_16200 PF00575 S1 RNA binding domain ATY49_16205 PF02545 Maf-like protein ATY49_16210 PF04402 Protein of unknown function (DUF541) ATY49_16225 PF02590 Predicted SPOUT methyltransferase ATY49_16245 PF01467 Cytidylyltransferase-like ATY49_16260 PF13603 Leucyl-tRNA synthetase, Domain 2 ATY49_16260 PF00133 tRNA synthetases class I (I, L, M and V) ATY49_16260 PF08264 Anticodon-binding domain of tRNA ATY49_16270 PF00085 Thioredoxin ATY49_16285 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_16335 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_16345 PF00128 Alpha amylase, catalytic domain ATY49_16345 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ATY49_16350 PF01609 Transposase DDE domain ATY49_16350 PF05598 Transposase domain (DUF772) ATY49_16355 PF01609 Transposase DDE domain ATY49_16355 PF05598 Transposase domain (DUF772) ATY49_16380 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_16385 PF00665 Integrase core domain ATY49_16385 PF13936 Helix-turn-helix domain ATY49_16415 PF13683 Integrase core domain ATY49_16415 PF13276 HTH-like domain ATY49_16425 PF01527 Transposase ATY49_16450 PF03797 Autotransporter beta-domain ATY49_16450 PF00657 GDSL-like Lipase/Acylhydrolase ATY49_16460 PF05690 Thiazole biosynthesis protein ThiG ATY49_16465 PF02390 Putative methyltransferase ATY49_16470 PF02080 TrkA-C domain ATY49_16470 PF03600 Citrate transporter ATY49_16500 PF00665 Integrase core domain ATY49_16500 PF13936 Helix-turn-helix domain ATY49_16505 PF01557 Fumarylacetoacetate (FAA) hydrolase family ATY49_16510 PF01741 Large-conductance mechanosensitive channel, MscL ATY49_16520 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_16530 PF00135 Carboxylesterase family ATY49_16535 PF08032 RNA 2'-O ribose methyltransferase substrate binding ATY49_16535 PF00588 SpoU rRNA Methylase family ATY49_16565 PF01433 Peptidase family M1 domain ATY49_16565 PF11838 ERAP1-like C-terminal domain ATY49_16570 PF00873 AcrB/AcrD/AcrF family ATY49_16575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ATY49_16575 PF00529 HlyD membrane-fusion protein of T1SS ATY49_16580 PF00009 Elongation factor Tu GTP binding domain ATY49_16585 PF01507 Phosphoadenosine phosphosulfate reductase family ATY49_16590 PF00175 Oxidoreductase NAD-binding domain ATY49_16590 PF00667 FAD binding domain ATY49_16590 PF00258 Flavodoxin ATY49_16595 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ATY49_16595 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ATY49_16600 PF01507 Phosphoadenosine phosphosulfate reductase family ATY49_16620 PF00672 HAMP domain ATY49_16620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_16620 PF00512 His Kinase A (phospho-acceptor) domain ATY49_16620 PF00072 Response regulator receiver domain ATY49_16620 PF01627 Hpt domain ATY49_16630 PF03466 LysR substrate binding domain ATY49_16630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY49_16635 PF10414 Sirohaem synthase dimerisation region ATY49_16635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ATY49_16635 PF14824 Sirohaem biosynthesis protein central ATY49_16640 PF00291 Pyridoxal-phosphate dependent enzyme ATY49_16655 PF01661 Macro domain ATY49_16660 PF00274 Fructose-bisphosphate aldolase class-I ATY49_16665 PF02887 Pyruvate kinase, alpha/beta domain ATY49_16665 PF00224 Pyruvate kinase, barrel domain ATY49_16675 PF00162 Phosphoglycerate kinase ATY49_16705 PF06628 Catalase-related immune-responsive ATY49_16705 PF00199 Catalase ATY49_16705 PF18011 C-terminal domain found in long catalases ATY49_16720 PF05598 Transposase domain (DUF772) ATY49_16720 PF01609 Transposase DDE domain ATY49_16740 PF02311 AraC-like ligand binding domain ATY49_16740 PF12833 Helix-turn-helix domain ATY49_16760 PF05598 Transposase domain (DUF772) ATY49_16765 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ATY49_16765 PF07676 WD40-like Beta Propeller Repeat ATY49_16765 PF00326 Prolyl oligopeptidase family ATY49_16780 PF03169 OPT oligopeptide transporter protein ATY49_16795 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ATY49_16795 PF14579 Helix-hairpin-helix motif ATY49_16795 PF02811 PHP domain ATY49_16795 PF07733 Bacterial DNA polymerase III alpha NTPase domain ATY49_16810 PF00717 Peptidase S24-like ATY49_16810 PF01726 LexA DNA binding domain ATY49_16840 PF13456 Reverse transcriptase-like ATY49_16840 PF00300 Histidine phosphatase superfamily (branch 1) ATY49_16880 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ATY49_16880 PF11867 Domain of unknown function (DUF3387) ATY49_16880 PF18766 SWI2/SNF2 ATPase ATY49_16885 PF01909 Nucleotidyltransferase domain ATY49_16890 PF08780 Nucleotidyltransferase substrate binding protein like ATY49_16895 PF02384 N-6 DNA Methylase ATY49_16915 PF08463 EcoEI R protein C-terminal ATY49_16915 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ATY49_16915 PF00271 Helicase conserved C-terminal domain ATY49_16915 PF04851 Type III restriction enzyme, res subunit ATY49_16925 PF02384 N-6 DNA Methylase ATY49_16930 PF01420 Type I restriction modification DNA specificity domain ATY49_17005 PF04717 Type VI secretion system, phage-baseplate injector ATY49_17005 PF16671 Actin cross-linking domain ATY49_17015 PF17871 AAA lid domain ATY49_17015 PF10431 C-terminal, D2-small domain, of ClpB protein ATY49_17015 PF07724 AAA domain (Cdc48 subfamily) ATY49_17015 PF00004 ATPase family associated with various cellular activities (AAA) ATY49_17070 PF04717 Type VI secretion system, phage-baseplate injector ATY49_17070 PF16671 Actin cross-linking domain ATY49_17095 PF16671 Actin cross-linking domain ATY49_17095 PF04717 Type VI secretion system, phage-baseplate injector ATY49_17100 PF04717 Type VI secretion system, phage-baseplate injector ATY49_17100 PF16671 Actin cross-linking domain ATY49_17105 PF00182 Chitinase class I ATY49_17110 PF04717 Type VI secretion system, phage-baseplate injector ATY49_17110 PF16671 Actin cross-linking domain ATY49_17165 PF16671 Actin cross-linking domain ATY49_17165 PF04717 Type VI secretion system, phage-baseplate injector ATY49_17190 PF04717 Type VI secretion system, phage-baseplate injector ATY49_17200 PF01609 Transposase DDE domain ATY49_17200 PF05598 Transposase domain (DUF772) ATY49_17210 PF03781 Sulfatase-modifying factor enzyme 1 ATY49_17220 PF04717 Type VI secretion system, phage-baseplate injector ATY49_17235 PF04972 BON domain ATY49_17235 PF00691 OmpA family ATY49_17270 PF01527 Transposase ATY49_17275 PF02222 ATP-grasp domain ATY49_17300 PF00730 HhH-GPD superfamily base excision DNA repair protein ATY49_17315 PF00072 Response regulator receiver domain ATY49_17315 PF00196 Bacterial regulatory proteins, luxR family ATY49_17320 PF07730 Histidine kinase ATY49_17330 PF05209 Septum formation inhibitor MinC, N-terminal domain ATY49_17330 PF03775 Septum formation inhibitor MinC, C-terminal domain ATY49_17335 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ATY49_17340 PF03776 Septum formation topological specificity factor MinE ATY49_17350 PF08521 Two-component sensor kinase N-terminal ATY49_17350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_17350 PF00512 His Kinase A (phospho-acceptor) domain ATY49_17355 PF00072 Response regulator receiver domain ATY49_17355 PF00486 Transcriptional regulatory protein, C terminal ATY49_17360 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ATY49_17370 PF08019 Phosphoethanolamine transferase EptA/EptB ATY49_17370 PF00884 Sulfatase ATY49_17390 PF00664 ABC transporter transmembrane region ATY49_17390 PF00005 ABC transporter ATY49_17390 PF03412 Peptidase C39 family ATY49_17410 PF02347 Glycine cleavage system P-protein ATY49_17445 PF01527 Transposase ATY49_17455 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_17470 PF01196 Ribosomal protein L17 ATY49_17475 PF01000 RNA polymerase Rpb3/RpoA insert domain ATY49_17475 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ATY49_17475 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ATY49_17480 PF00163 Ribosomal protein S4/S9 N-terminal domain ATY49_17480 PF01479 S4 domain ATY49_17485 PF00411 Ribosomal protein S11 ATY49_17490 PF00416 Ribosomal protein S13/S18 ATY49_17495 PF00344 SecY translocase ATY49_17500 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ATY49_17505 PF00327 Ribosomal protein L30p/L7e ATY49_17510 PF03719 Ribosomal protein S5, C-terminal domain ATY49_17510 PF00333 Ribosomal protein S5, N-terminal domain ATY49_17515 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ATY49_17520 PF00347 Ribosomal protein L6 ATY49_17525 PF00410 Ribosomal protein S8 ATY49_17530 PF00253 Ribosomal protein S14p/S29e ATY49_17535 PF00281 Ribosomal protein L5 ATY49_17535 PF00673 ribosomal L5P family C-terminus ATY49_17540 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ATY49_17540 PF00467 KOW motif ATY49_17545 PF00238 Ribosomal protein L14p/L23e ATY49_17550 PF00366 Ribosomal protein S17 ATY49_17555 PF00831 Ribosomal L29 protein ATY49_17560 PF00252 Ribosomal protein L16p/L10e ATY49_17565 PF07650 KH domain ATY49_17565 PF00189 Ribosomal protein S3, C-terminal domain ATY49_17570 PF00237 Ribosomal protein L22p/L17e ATY49_17575 PF00203 Ribosomal protein S19 ATY49_17580 PF00181 Ribosomal Proteins L2, RNA binding domain ATY49_17580 PF03947 Ribosomal Proteins L2, C-terminal domain ATY49_17585 PF00276 Ribosomal protein L23 ATY49_17590 PF00573 Ribosomal protein L4/L1 family ATY49_17595 PF00297 Ribosomal protein L3 ATY49_17600 PF00338 Ribosomal protein S10p/S20e ATY49_17610 PF03143 Elongation factor Tu C-terminal domain ATY49_17610 PF03144 Elongation factor Tu domain 2 ATY49_17610 PF00009 Elongation factor Tu GTP binding domain ATY49_17615 PF03144 Elongation factor Tu domain 2 ATY49_17615 PF00009 Elongation factor Tu GTP binding domain ATY49_17615 PF03764 Elongation factor G, domain IV ATY49_17615 PF14492 Elongation Factor G, domain II ATY49_17615 PF00679 Elongation factor G C-terminus ATY49_17620 PF00177 Ribosomal protein S7p/S5e ATY49_17625 PF00164 Ribosomal protein S12/S23 ATY49_17630 PF00623 RNA polymerase Rpb1, domain 2 ATY49_17630 PF04998 RNA polymerase Rpb1, domain 5 ATY49_17630 PF05000 RNA polymerase Rpb1, domain 4 ATY49_17630 PF04983 RNA polymerase Rpb1, domain 3 ATY49_17630 PF04997 RNA polymerase Rpb1, domain 1 ATY49_17635 PF04560 RNA polymerase Rpb2, domain 7 ATY49_17635 PF00562 RNA polymerase Rpb2, domain 6 ATY49_17635 PF10385 RNA polymerase beta subunit external 1 domain ATY49_17635 PF04563 RNA polymerase beta subunit ATY49_17635 PF04565 RNA polymerase Rpb2, domain 3 ATY49_17635 PF04561 RNA polymerase Rpb2, domain 2 ATY49_17640 PF00542 Ribosomal protein L7/L12 C-terminal domain ATY49_17640 PF16320 Ribosomal protein L7/L12 dimerisation domain ATY49_17645 PF00466 Ribosomal protein L10 ATY49_17650 PF00687 Ribosomal protein L1p/L10e family ATY49_17655 PF00298 Ribosomal protein L11, RNA binding domain ATY49_17655 PF03946 Ribosomal protein L11, N-terminal domain ATY49_17660 PF00467 KOW motif ATY49_17660 PF02357 Transcription termination factor nusG ATY49_17665 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ATY49_17675 PF00009 Elongation factor Tu GTP binding domain ATY49_17675 PF03143 Elongation factor Tu C-terminal domain ATY49_17675 PF03144 Elongation factor Tu domain 2 ATY49_17695 PF06071 Protein of unknown function (DUF933) ATY49_17695 PF01926 50S ribosome-binding GTPase ATY49_17700 PF01195 Peptidyl-tRNA hydrolase ATY49_17705 PF14693 Ribosomal protein TL5, C-terminal domain ATY49_17705 PF01386 Ribosomal L25p family ATY49_17710 PF14572 Phosphoribosyl synthetase-associated domain ATY49_17710 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ATY49_17720 PF08544 GHMP kinases C terminal ATY49_17720 PF00288 GHMP kinases N terminal domain ATY49_17725 PF03550 Outer membrane lipoprotein LolB ATY49_17735 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ATY49_17735 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ATY49_17735 PF01488 Shikimate / quinate 5-dehydrogenase ATY49_17740 PF00472 RF-1 domain ATY49_17740 PF03462 PCRF domain ATY49_17750 PF00994 Probable molybdopterin binding domain ATY49_17755 PF03976 Polyphosphate kinase 2 (PPK2) ATY49_17765 PF00708 Acylphosphatase ATY49_17770 PF08534 Redoxin ATY49_17775 PF03631 Virulence factor BrkB ATY49_17780 PF03358 NADPH-dependent FMN reductase ATY49_17790 PF17189 Glycosyl hydrolase family 30 beta sandwich domain ATY49_17790 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain ATY49_17800 PF04073 Aminoacyl-tRNA editing domain ATY49_17810 PF01063 Amino-transferase class IV ATY49_17840 PF02233 NAD(P) transhydrogenase beta subunit ATY49_17845 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ATY49_17865 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ATY49_17865 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ATY49_17865 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ATY49_17880 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ATY49_17880 PF01367 5'-3' exonuclease, C-terminal SAM fold ATY49_17880 PF01612 3'-5' exonuclease ATY49_17880 PF00476 DNA polymerase family A ATY49_17885 PF00293 NUDIX domain ATY49_17895 PF00561 alpha/beta hydrolase fold ATY49_17925 PF05175 Methyltransferase small domain ATY49_17925 PF17827 PrmC N-terminal domain ATY49_17930 PF10417 C-terminal domain of 1-Cys peroxiredoxin ATY49_17930 PF00578 AhpC/TSA family ATY49_17935 PF13192 Thioredoxin domain ATY49_17935 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY49_17940 PF03466 LysR substrate binding domain ATY49_17940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY49_17945 PF01272 Transcription elongation factor, GreA/GreB, C-term ATY49_17945 PF03449 Transcription elongation factor, N-terminal ATY49_17950 PF00923 Transaldolase/Fructose-6-phosphate aldolase ATY49_17970 PF01625 Peptide methionine sulfoxide reductase ATY49_18005 PF00462 Glutaredoxin ATY49_18010 PF13181 Tetratricopeptide repeat ATY49_18010 PF01435 Peptidase family M48 ATY49_18015 PF00486 Transcriptional regulatory protein, C terminal ATY49_18015 PF00072 Response regulator receiver domain ATY49_18020 PF00989 PAS fold ATY49_18020 PF11808 Phosphate regulon sensor protein PhoR ATY49_18020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_18020 PF00512 His Kinase A (phospho-acceptor) domain ATY49_18025 PF02503 Polyphosphate kinase middle domain ATY49_18025 PF13090 Polyphosphate kinase C-terminal domain 2 ATY49_18025 PF17941 Polyphosphate kinase C-terminal domain 1 ATY49_18025 PF13089 Polyphosphate kinase N-terminal domain ATY49_18030 PF02541 Ppx/GppA phosphatase family ATY49_18035 PF13439 Glycosyltransferase Family 4 ATY49_18035 PF00534 Glycosyl transferases group 1 ATY49_18040 PF01569 PAP2 superfamily ATY49_18045 PF00149 Calcineurin-like phosphoesterase ATY49_18055 PF04305 Protein of unknown function (DUF455) ATY49_18060 PF00156 Phosphoribosyl transferase domain ATY49_18075 PF02875 Mur ligase family, glutamate ligase domain ATY49_18075 PF08245 Mur ligase middle domain ATY49_18080 PF00300 Histidine phosphatase superfamily (branch 1) ATY49_18085 PF10459 Peptidase S46 ATY49_18090 PF05506 Domain of unknown function (DUF756) ATY49_18090 PF04185 Phosphoesterase family ATY49_18100 PF08240 Alcohol dehydrogenase GroES-like domain ATY49_18100 PF00107 Zinc-binding dehydrogenase ATY49_18110 PF00005 ABC transporter ATY49_18110 PF17850 CysA C-terminal regulatory domain ATY49_18110 PF12857 TOBE-like domain ATY49_18115 PF00528 Binding-protein-dependent transport system inner membrane component ATY49_18120 PF00528 Binding-protein-dependent transport system inner membrane component ATY49_18130 PF00155 Aminotransferase class I and II ATY49_18140 PF00849 RNA pseudouridylate synthase ATY49_18150 PF05736 OprF membrane domain ATY49_18150 PF00691 OmpA family ATY49_18155 PF00107 Zinc-binding dehydrogenase ATY49_18155 PF08240 Alcohol dehydrogenase GroES-like domain ATY49_18160 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY49_18160 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ATY49_18170 PF01527 Transposase ATY49_18200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_18200 PF00512 His Kinase A (phospho-acceptor) domain ATY49_18200 PF01627 Hpt domain ATY49_18200 PF00072 Response regulator receiver domain ATY49_18200 PF17149 Periplasmic sensor domain found in signal transduction proteins ATY49_18200 PF00672 HAMP domain ATY49_18205 PF00072 Response regulator receiver domain ATY49_18205 PF00990 Diguanylate cyclase, GGDEF domain ATY49_18225 PF00749 tRNA synthetases class I (E and Q), catalytic domain ATY49_18225 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ATY49_18235 PF13936 Helix-turn-helix domain ATY49_18235 PF00665 Integrase core domain ATY49_18245 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_18280 PF01728 FtsJ-like methyltransferase ATY49_18280 PF18125 RlmM ferredoxin-like domain ATY49_18285 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ATY49_18285 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ATY49_18290 PF08450 SMP-30/Gluconolactonase/LRE-like region ATY49_18310 PF00378 Enoyl-CoA hydratase/isomerase ATY49_18315 PF00171 Aldehyde dehydrogenase family ATY49_18320 PF00501 AMP-binding enzyme ATY49_18320 PF13193 AMP-binding enzyme C-terminal domain ATY49_18325 PF03466 LysR substrate binding domain ATY49_18325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY49_18335 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ATY49_18365 PF01494 FAD binding domain ATY49_18370 PF01494 FAD binding domain ATY49_18380 PF01923 Cobalamin adenosyltransferase ATY49_18385 PF00850 Histone deacetylase domain ATY49_18390 PF04453 LPS transport system D ATY49_18390 PF03968 OstA-like protein ATY49_18395 PF00639 PPIC-type PPIASE domain ATY49_18395 PF09312 SurA N-terminal domain ATY49_18400 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ATY49_18405 PF00398 Ribosomal RNA adenine dimethylase ATY49_18410 PF04379 ApaG domain ATY49_18415 PF00149 Calcineurin-like phosphoesterase ATY49_18420 PF00186 Dihydrofolate reductase ATY49_18430 PF00303 Thymidylate synthase ATY49_18435 PF01790 Prolipoprotein diacylglyceryl transferase ATY49_18455 PF01219 Prokaryotic diacylglycerol kinase ATY49_18465 PF00512 His Kinase A (phospho-acceptor) domain ATY49_18465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_18465 PF08521 Two-component sensor kinase N-terminal ATY49_18470 PF00072 Response regulator receiver domain ATY49_18470 PF00486 Transcriptional regulatory protein, C terminal ATY49_18475 PF13472 GDSL-like Lipase/Acylhydrolase family ATY49_18480 PF00005 ABC transporter ATY49_18490 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ATY49_18500 PF00005 ABC transporter ATY49_18525 PF00248 Aldo/keto reductase family ATY49_18535 PF01773 Na+ dependent nucleoside transporter N-terminus ATY49_18535 PF07662 Na+ dependent nucleoside transporter C-terminus ATY49_18535 PF07670 Nucleoside recognition ATY49_18540 PF00294 pfkB family carbohydrate kinase ATY49_18555 PF01207 Dihydrouridine synthase (Dus) ATY49_18560 PF13649 Methyltransferase domain ATY49_18570 PF02773 S-adenosylmethionine synthetase, C-terminal domain ATY49_18570 PF02772 S-adenosylmethionine synthetase, central domain ATY49_18570 PF00438 S-adenosylmethionine synthetase, N-terminal domain ATY49_18580 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_18585 PF00328 Histidine phosphatase superfamily (branch 2) ATY49_18610 PF00311 Phosphoenolpyruvate carboxylase ATY49_18620 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ATY49_18620 PF05221 S-adenosyl-L-homocysteine hydrolase ATY49_18625 PF13649 Methyltransferase domain ATY49_18655 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ATY49_18670 PF00082 Subtilase family ATY49_18670 PF09286 Pro-kumamolisin, activation domain ATY49_18675 PF14765 Polyketide synthase dehydratase ATY49_18675 PF00550 Phosphopantetheine attachment site ATY49_18675 PF08659 KR domain ATY49_18675 PF00109 Beta-ketoacyl synthase, N-terminal domain ATY49_18675 PF00107 Zinc-binding dehydrogenase ATY49_18675 PF08240 Alcohol dehydrogenase GroES-like domain ATY49_18675 PF00698 Acyl transferase domain ATY49_18675 PF02801 Beta-ketoacyl synthase, C-terminal domain ATY49_18675 PF16197 Ketoacyl-synthetase C-terminal extension ATY49_18685 PF02219 Methylenetetrahydrofolate reductase ATY49_18695 PF00293 NUDIX domain ATY49_18705 PF07517 SecA DEAD-like domain ATY49_18705 PF07516 SecA Wing and Scaffold domain ATY49_18705 PF01043 SecA preprotein cross-linking domain ATY49_18705 PF02810 SEC-C motif ATY49_18710 PF01476 LysM domain ATY49_18710 PF01551 Peptidase family M23 ATY49_18720 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ATY49_18725 PF12327 FtsZ family, C-terminal domain ATY49_18725 PF00091 Tubulin/FtsZ family, GTPase domain ATY49_18730 PF02491 SHS2 domain inserted in FTSA ATY49_18735 PF03799 Cell division protein FtsQ ATY49_18735 PF08478 POTRA domain, FtsQ-type ATY49_18740 PF01820 D-ala D-ala ligase N-terminus ATY49_18740 PF07478 D-ala D-ala ligase C-terminus ATY49_18745 PF08245 Mur ligase middle domain ATY49_18745 PF01225 Mur ligase family, catalytic domain ATY49_18745 PF02875 Mur ligase family, glutamate ligase domain ATY49_18750 PF04101 Glycosyltransferase family 28 C-terminal domain ATY49_18750 PF03033 Glycosyltransferase family 28 N-terminal domain ATY49_18755 PF01098 Cell cycle protein ATY49_18760 PF00953 Glycosyl transferase family 4 ATY49_18765 PF08245 Mur ligase middle domain ATY49_18765 PF02875 Mur ligase family, glutamate ligase domain ATY49_18765 PF01225 Mur ligase family, catalytic domain ATY49_18770 PF02875 Mur ligase family, glutamate ligase domain ATY49_18770 PF01225 Mur ligase family, catalytic domain ATY49_18770 PF08245 Mur ligase middle domain ATY49_18775 PF03717 Penicillin-binding Protein dimerisation domain ATY49_18775 PF00905 Penicillin binding protein transpeptidase domain ATY49_18780 PF04999 Cell division protein FtsL ATY49_18785 PF01795 MraW methylase family ATY49_18790 PF02381 MraZ protein, putative antitoxin-like ATY49_18805 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ATY49_18815 PF02021 Uncharacterised protein family UPF0102 ATY49_18820 PF04307 LexA-binding, inner membrane-associated putative hydrolase ATY49_18825 PF01565 FAD binding domain ATY49_18825 PF02913 FAD linked oxidases, C-terminal domain ATY49_18830 PF00072 Response regulator receiver domain ATY49_18830 PF00486 Transcriptional regulatory protein, C terminal ATY49_18835 PF13492 GAF domain ATY49_18835 PF00512 His Kinase A (phospho-acceptor) domain ATY49_18835 PF13493 Domain of unknown function (DUF4118) ATY49_18835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_18835 PF02702 Osmosensitive K+ channel His kinase sensor domain ATY49_18840 PF02669 K+-transporting ATPase, c chain ATY49_18850 PF03814 Potassium-transporting ATPase A subunit ATY49_18875 PF00586 AIR synthase related protein, N-terminal domain ATY49_18875 PF02769 AIR synthase related protein, C-terminal domain ATY49_18880 PF01029 NusB family ATY49_18885 PF00885 6,7-dimethyl-8-ribityllumazine synthase ATY49_18890 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ATY49_18890 PF00925 GTP cyclohydrolase II ATY49_18895 PF00677 Lumazine binding domain ATY49_18905 PF01872 RibD C-terminal domain ATY49_18905 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ATY49_18915 PF03477 ATP cone domain ATY49_18925 PF00464 Serine hydroxymethyltransferase ATY49_18945 PF00005 ABC transporter ATY49_18945 PF12848 ABC transporter ATY49_18965 PF00756 Putative esterase ATY49_18975 PF00107 Zinc-binding dehydrogenase ATY49_18975 PF08240 Alcohol dehydrogenase GroES-like domain ATY49_18980 PF02583 Metal-sensitive transcriptional repressor ATY49_18990 PF00486 Transcriptional regulatory protein, C terminal ATY49_18990 PF00072 Response regulator receiver domain ATY49_18995 PF00512 His Kinase A (phospho-acceptor) domain ATY49_18995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_18995 PF00672 HAMP domain ATY49_18995 PF16527 Two-component sensor protein CpxA, periplasmic domain ATY49_19030 PF04107 Glutamate-cysteine ligase family 2(GCS2) ATY49_19045 PF01926 50S ribosome-binding GTPase ATY49_19050 PF00034 Cytochrome c ATY49_19070 PF02028 BCCT, betaine/carnitine/choline family transporter ATY49_19080 PF01527 Transposase ATY49_19085 PF01609 Transposase DDE domain ATY49_19085 PF05598 Transposase domain (DUF772) ATY49_19090 PF00291 Pyridoxal-phosphate dependent enzyme ATY49_19090 PF13291 ACT domain ATY49_19095 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_19105 PF05598 Transposase domain (DUF772) ATY49_19105 PF01609 Transposase DDE domain ATY49_19110 PF01527 Transposase ATY49_19130 PF01966 HD domain ATY49_19130 PF12627 Probable RNA and SrmB- binding site of polymerase A ATY49_19130 PF01743 Poly A polymerase head domain ATY49_19145 PF05598 Transposase domain (DUF772) ATY49_19145 PF01609 Transposase DDE domain ATY49_19150 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_19180 PF14883 Hypothetical glycosyl hydrolase family 13 ATY49_19180 PF01522 Polysaccharide deacetylase ATY49_19185 PF00535 Glycosyl transferase family 2 ATY49_19195 PF01979 Amidohydrolase family ATY49_19200 PF01380 SIS domain ATY49_19205 PF00356 Bacterial regulatory proteins, lacI family ATY49_19210 PF07690 Major Facilitator Superfamily ATY49_19230 PF16355 Domain of unknown function (DUF4982) ATY49_19230 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 ATY49_19230 PF02837 Glycosyl hydrolases family 2, sugar binding domain ATY49_19230 PF00703 Glycosyl hydrolases family 2 ATY49_19230 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ATY49_19265 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ATY49_19270 PF00512 His Kinase A (phospho-acceptor) domain ATY49_19270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_19275 PF00072 Response regulator receiver domain ATY49_19280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_19280 PF00512 His Kinase A (phospho-acceptor) domain ATY49_19280 PF08446 PAS fold ATY49_19280 PF00360 Phytochrome region ATY49_19280 PF01590 GAF domain ATY49_19285 PF04972 BON domain ATY49_19290 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ATY49_19290 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ATY49_19295 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ATY49_19295 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ATY49_19335 PF01467 Cytidylyltransferase-like ATY49_19335 PF00293 NUDIX domain ATY49_19345 PF00595 PDZ domain ATY49_19345 PF11818 C-terminal domain of tail specific protease (DUF3340) ATY49_19345 PF03572 Peptidase family S41 ATY49_19345 PF17804 Tail specific protease N-terminal domain ATY49_19350 PF04055 Radical SAM superfamily ATY49_19350 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ATY49_19355 PF03099 Biotin/lipoate A/B protein ligase family ATY49_19360 PF04359 Protein of unknown function (DUF493) ATY49_19370 PF00768 D-alanyl-D-alanine carboxypeptidase ATY49_19370 PF07943 Penicillin-binding protein 5, C-terminal domain ATY49_19380 PF03330 Lytic transglycolase ATY49_19380 PF05036 Sporulation related domain ATY49_19385 PF13406 Transglycosylase SLT domain ATY49_19420 PF01098 Cell cycle protein ATY49_19425 PF03717 Penicillin-binding Protein dimerisation domain ATY49_19425 PF00905 Penicillin binding protein transpeptidase domain ATY49_19435 PF04085 rod shape-determining protein MreC ATY49_19445 PF00294 pfkB family carbohydrate kinase ATY49_19465 PF13673 Acetyltransferase (GNAT) domain ATY49_19475 PF13533 Biotin-lipoyl like ATY49_19485 PF01209 ubiE/COQ5 methyltransferase family ATY49_19490 PF17152 Periplasmic sensor domain ATY49_19490 PF00990 Diguanylate cyclase, GGDEF domain ATY49_19495 PF01433 Peptidase family M1 domain ATY49_19495 PF11838 ERAP1-like C-terminal domain ATY49_19510 PF00004 ATPase family associated with various cellular activities (AAA) ATY49_19510 PF10431 C-terminal, D2-small domain, of ClpB protein ATY49_19510 PF07724 AAA domain (Cdc48 subfamily) ATY49_19515 PF00227 Proteasome subunit ATY49_19520 PF00589 Phage integrase family ATY49_19520 PF02899 Phage integrase, N-terminal SAM-like domain ATY49_19545 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ATY49_19545 PF00326 Prolyl oligopeptidase family ATY49_19550 PF00155 Aminotransferase class I and II ATY49_19560 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ATY49_19560 PF00326 Prolyl oligopeptidase family ATY49_19585 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ATY49_19585 PF03900 Porphobilinogen deaminase, C-terminal domain ATY49_19590 PF00072 Response regulator receiver domain ATY49_19590 PF04397 LytTr DNA-binding domain ATY49_19595 PF07694 5TMR of 5TMR-LYT ATY49_19595 PF06580 Histidine kinase ATY49_19605 PF13632 Glycosyl transferase family group 2 ATY49_19615 PF08448 PAS fold ATY49_19615 PF00990 Diguanylate cyclase, GGDEF domain ATY49_19625 PF00916 Sulfate permease family ATY49_19625 PF01740 STAS domain ATY49_19630 PF00553 Cellulose binding domain ATY49_19630 PF00150 Cellulase (glycosyl hydrolase family 5) ATY49_19640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY49_19640 PF00672 HAMP domain ATY49_19640 PF02203 Tar ligand binding domain homologue ATY49_19645 PF00563 EAL domain ATY49_19645 PF00990 Diguanylate cyclase, GGDEF domain ATY49_19645 PF03707 Bacterial signalling protein N terminal repeat ATY49_19670 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_19690 PF01204 Trehalase ATY49_19710 PF01544 CorA-like Mg2+ transporter protein ATY49_19720 PF00324 Amino acid permease ATY49_19725 PF01341 Glycosyl hydrolases family 6 ATY49_19725 PF00041 Fibronectin type III domain ATY49_19725 PF00553 Cellulose binding domain ATY49_19730 PF03330 Lytic transglycolase ATY49_19735 PF00892 EamA-like transporter family ATY49_19760 PF07759 Protein of unknown function (DUF1615) ATY49_19795 PF00106 short chain dehydrogenase ATY49_19810 PF01527 Transposase ATY49_19820 PF04715 Anthranilate synthase component I, N terminal region ATY49_19820 PF00425 chorismate binding enzyme ATY49_19825 PF00781 Diacylglycerol kinase catalytic domain ATY49_19830 PF00583 Acetyltransferase (GNAT) family ATY49_19835 PF00834 Ribulose-phosphate 3 epimerase family ATY49_19840 PF00226 DnaJ domain ATY49_19840 PF05099 Tellurite resistance protein TerB ATY49_19860 PF02868 Thermolysin metallopeptidase, alpha-helical domain ATY49_19860 PF01483 Proprotein convertase P-domain ATY49_19860 PF07504 Fungalysin/Thermolysin Propeptide Motif ATY49_19860 PF01447 Thermolysin metallopeptidase, catalytic domain ATY49_19865 PF02868 Thermolysin metallopeptidase, alpha-helical domain ATY49_19865 PF07504 Fungalysin/Thermolysin Propeptide Motif ATY49_19865 PF01483 Proprotein convertase P-domain ATY49_19865 PF01447 Thermolysin metallopeptidase, catalytic domain ATY49_19870 PF02868 Thermolysin metallopeptidase, alpha-helical domain ATY49_19870 PF01447 Thermolysin metallopeptidase, catalytic domain ATY49_19870 PF03413 Peptidase propeptide and YPEB domain ATY49_19870 PF07504 Fungalysin/Thermolysin Propeptide Motif ATY49_19885 PF13244 Domain of unknown function (DUF4040) ATY49_19885 PF00361 Proton-conducting membrane transporter ATY49_19885 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ATY49_19885 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ATY49_19890 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ATY49_19895 PF00361 Proton-conducting membrane transporter ATY49_19905 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ATY49_19910 PF03334 Na+/H+ antiporter subunit ATY49_19915 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_19925 PF05598 Transposase domain (DUF772) ATY49_19925 PF01609 Transposase DDE domain ATY49_19930 PF04209 homogentisate 1,2-dioxygenase ATY49_19935 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ATY49_19940 PF01047 MarR family ATY49_19950 PF00854 POT family ATY49_19955 PF03301 Tryptophan 2,3-dioxygenase ATY49_19995 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_20005 PF02803 Thiolase, C-terminal domain ATY49_20005 PF00108 Thiolase, N-terminal domain ATY49_20055 PF01609 Transposase DDE domain ATY49_20055 PF05598 Transposase domain (DUF772) ATY49_20085 PF01427 D-ala-D-ala dipeptidase ATY49_20110 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ATY49_20110 PF13378 Enolase C-terminal domain-like ATY49_20140 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_20150 PF13520 Amino acid permease ATY49_20165 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_20180 PF05360 yiaA/B two helix domain ATY49_20185 PF05598 Transposase domain (DUF772) ATY49_20185 PF01609 Transposase DDE domain ATY49_20195 PF07995 Glucose / Sorbosone dehydrogenase ATY49_20225 PF13936 Helix-turn-helix domain ATY49_20225 PF00665 Integrase core domain ATY49_20230 PF14310 Fibronectin type III-like domain ATY49_20230 PF00933 Glycosyl hydrolase family 3 N terminal domain ATY49_20230 PF01915 Glycosyl hydrolase family 3 C-terminal domain ATY49_20235 PF02152 Dihydroneopterin aldolase ATY49_20240 PF00814 Glycoprotease family ATY49_20245 PF01165 Ribosomal protein S21 ATY49_20250 PF09424 Yqey-like protein ATY49_20255 PF03631 Virulence factor BrkB ATY49_20260 PF10410 DnaB-helicase binding domain of primase ATY49_20260 PF08278 DNA primase DnaG DnaB-binding ATY49_20260 PF08275 DNA primase catalytic core, N-terminal domain ATY49_20260 PF01807 CHC2 zinc finger ATY49_20275 PF13593 SBF-like CPA transporter family (DUF4137) ATY49_20285 PF01040 UbiA prenyltransferase family ATY49_20310 PF00510 Cytochrome c oxidase subunit III ATY49_20315 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 ATY49_20320 PF00115 Cytochrome C and Quinol oxidase polypeptide I ATY49_20325 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ATY49_20325 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ATY49_20335 PF00171 Aldehyde dehydrogenase family ATY49_20335 PF01619 Proline dehydrogenase ATY49_20335 PF14850 DNA-binding domain of Proline dehydrogenase ATY49_20335 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ATY49_20340 PF01527 Transposase ATY49_20345 PF13276 HTH-like domain ATY49_20345 PF13683 Integrase core domain ATY49_20355 PF00210 Ferritin-like domain ATY49_20365 PF00293 NUDIX domain ATY49_20380 PF00380 Ribosomal protein S9/S16 ATY49_20385 PF00572 Ribosomal protein L13 ATY49_20390 PF03232 Ubiquinone biosynthesis protein COQ7 ATY49_20395 PF00893 Small Multidrug Resistance protein ATY49_20400 PF02675 S-adenosylmethionine decarboxylase ATY49_20405 PF00325 Bacterial regulatory proteins, crp family ATY49_20405 PF00027 Cyclic nucleotide-binding domain ATY49_20415 PF00218 Indole-3-glycerol phosphate synthase ATY49_20420 PF00591 Glycosyl transferase family, a/b domain ATY49_20420 PF02885 Glycosyl transferase family, helical bundle domain ATY49_20435 PF00117 Glutamine amidotransferase class-I ATY49_20445 PF01527 Transposase ATY49_20450 PF13683 Integrase core domain ATY49_20450 PF13276 HTH-like domain ATY49_20460 PF03971 Monomeric isocitrate dehydrogenase ATY49_20470 PF05598 Transposase domain (DUF772) ATY49_20510 PF01609 Transposase DDE domain ATY49_20510 PF05598 Transposase domain (DUF772) ATY49_20520 PF00872 Transposase, Mutator family ATY49_20525 PF14489 QueF-like protein ATY49_20525 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ATY49_20535 PF07687 Peptidase dimerisation domain ATY49_20535 PF01546 Peptidase family M20/M25/M40 ATY49_20540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ATY49_20545 PF00873 AcrB/AcrD/AcrF family ATY49_20550 PF00873 AcrB/AcrD/AcrF family ATY49_20555 PF07063 Domain of unknown function (DUF1338) ATY49_20585 PF00581 Rhodanese-like domain ATY49_20590 PF02556 Preprotein translocase subunit SecB ATY49_20595 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ATY49_20595 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ATY49_20605 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ATY49_20605 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ATY49_20605 PF00205 Thiamine pyrophosphate enzyme, central domain ATY49_20610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_20610 PF00512 His Kinase A (phospho-acceptor) domain ATY49_20615 PF00072 Response regulator receiver domain ATY49_20615 PF02954 Bacterial regulatory protein, Fis family ATY49_20615 PF00158 Sigma-54 interaction domain ATY49_20630 PF07690 Major Facilitator Superfamily ATY49_20635 PF00588 SpoU rRNA Methylase family ATY49_20650 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ATY49_20650 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ATY49_20655 PF13784 Fic/DOC family N-terminal ATY49_20655 PF02661 Fic/DOC family ATY49_20660 PF01555 DNA methylase ATY49_20670 PF00561 alpha/beta hydrolase fold ATY49_20675 PF03692 Putative zinc- or iron-chelating domain ATY49_20680 PF00501 AMP-binding enzyme ATY49_20685 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family ATY49_20690 PF05598 Transposase domain (DUF772) ATY49_20700 PF01966 HD domain ATY49_20700 PF11871 Domain of unknown function (DUF3391) ATY49_20705 PF07690 Major Facilitator Superfamily ATY49_20735 PF00132 Bacterial transferase hexapeptide (six repeats) ATY49_20740 PF03692 Putative zinc- or iron-chelating domain ATY49_20745 PF00920 Dehydratase family ATY49_20750 PF00589 Phage integrase family ATY49_20750 PF13495 Phage integrase, N-terminal SAM-like domain ATY49_20755 PF05598 Transposase domain (DUF772) ATY49_20765 PF05598 Transposase domain (DUF772) ATY49_20765 PF01609 Transposase DDE domain ATY49_20775 PF01218 Coproporphyrinogen III oxidase ATY49_20780 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ATY49_20780 PF01612 3'-5' exonuclease ATY49_20780 PF00476 DNA polymerase family A ATY49_20780 PF01367 5'-3' exonuclease, C-terminal SAM fold ATY49_20790 PF13683 Integrase core domain ATY49_20790 PF13276 HTH-like domain ATY49_20795 PF01527 Transposase ATY49_20805 PF17831 Pyruvate dehydrogenase E1 component middle domain ATY49_20805 PF00456 Transketolase, thiamine diphosphate binding domain ATY49_20830 PF03377 TAL effector repeat ATY49_20840 PF05598 Transposase domain (DUF772) ATY49_20880 PF04264 YceI-like domain ATY49_20885 PF00881 Nitroreductase family ATY49_20915 PF01609 Transposase DDE domain ATY49_20915 PF05598 Transposase domain (DUF772) ATY49_20920 PF02592 Putative vitamin uptake transporter ATY49_20925 PF08335 GlnD PII-uridylyltransferase ATY49_20925 PF03710 Glutamate-ammonia ligase adenylyltransferase ATY49_20935 PF08450 SMP-30/Gluconolactonase/LRE-like region ATY49_20980 PF00793 DAHP synthetase I family ATY49_20990 PF00593 TonB dependent receptor ATY49_20990 PF07715 TonB-dependent Receptor Plug Domain ATY49_21000 PF00118 TCP-1/cpn60 chaperonin family ATY49_21005 PF00166 Chaperonin 10 Kd subunit ATY49_21035 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY49_21045 PF04542 Sigma-70 region 2 ATY49_21045 PF04545 Sigma-70, region 4 ATY49_21050 PF03167 Uracil DNA glycosylase superfamily ATY49_21055 PF00072 Response regulator receiver domain ATY49_21055 PF01339 CheB methylesterase ATY49_21060 PF18075 FtsX extracellular domain ATY49_21065 PF00005 ABC transporter ATY49_21070 PF00270 DEAD/DEAH box helicase ATY49_21070 PF00271 Helicase conserved C-terminal domain ATY49_21070 PF12300 ATP-dependent RNA helicase RhlB ATY49_21075 PF00085 Thioredoxin ATY49_21080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATY49_21080 PF07498 Rho termination factor, N-terminal domain ATY49_21080 PF07497 Rho termination factor, RNA-binding domain ATY49_21090 PF01527 Transposase ATY49_21100 PF01103 Surface antigen ATY49_21100 PF17243 POTRA domain TamA domain 1 ATY49_21105 PF04357 TamB, inner membrane protein subunit of TAM complex ATY49_21135 PF07977 FabA-like domain ATY49_21140 PF01553 Acyltransferase ATY49_21150 PF00550 Phosphopantetheine attachment site ATY49_21155 PF04820 Tryptophan halogenase ATY49_21200 PF01638 HxlR-like helix-turn-helix ATY49_21205 PF05368 NmrA-like family ATY49_21215 PF03812 2-keto-3-deoxygluconate permease ATY49_21220 PF08267 Cobalamin-independent synthase, N-terminal domain ATY49_21220 PF01717 Cobalamin-independent synthase, Catalytic domain ATY49_21230 PF03358 NADPH-dependent FMN reductase ATY49_21235 PF03466 LysR substrate binding domain ATY49_21235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY49_21240 PF02677 Epoxyqueuosine reductase QueH ATY49_21250 PF00672 HAMP domain ATY49_21250 PF00512 His Kinase A (phospho-acceptor) domain ATY49_21250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_21255 PF00672 HAMP domain ATY49_21255 PF00512 His Kinase A (phospho-acceptor) domain ATY49_21255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_21260 PF00486 Transcriptional regulatory protein, C terminal ATY49_21260 PF00072 Response regulator receiver domain ATY49_21265 PF00551 Formyl transferase ATY49_21275 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ATY49_21275 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ATY49_21280 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ATY49_21285 PF02146 Sir2 family ATY49_21295 PF07690 Major Facilitator Superfamily ATY49_21300 PF03466 LysR substrate binding domain ATY49_21300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY49_21310 PF01026 TatD related DNase ATY49_21340 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_21360 PF00266 Aminotransferase class-V ATY49_21375 PF09349 OHCU decarboxylase ATY49_21375 PF01014 Uricase ATY49_21415 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_21425 PF13936 Helix-turn-helix domain ATY49_21425 PF00665 Integrase core domain ATY49_21430 PF00326 Prolyl oligopeptidase family ATY49_21435 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ATY49_21435 PF02785 Biotin carboxylase C-terminal domain ATY49_21435 PF00364 Biotin-requiring enzyme ATY49_21435 PF00289 Biotin carboxylase, N-terminal domain ATY49_21440 PF01039 Carboxyl transferase domain ATY49_21445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATY49_21445 PF02770 Acyl-CoA dehydrogenase, middle domain ATY49_21445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATY49_21505 PF07683 Cobalamin synthesis protein cobW C-terminal domain ATY49_21505 PF02492 CobW/HypB/UreG, nucleotide-binding domain ATY49_21525 PF03969 AFG1-like ATPase ATY49_21530 PF00664 ABC transporter transmembrane region ATY49_21530 PF00005 ABC transporter ATY49_21530 PF03412 Peptidase C39 family ATY49_21540 PF00593 TonB dependent receptor ATY49_21540 PF07715 TonB-dependent Receptor Plug Domain ATY49_21545 PF13181 Tetratricopeptide repeat ATY49_21550 PF05746 DALR anticodon binding domain ATY49_21550 PF02092 Glycyl-tRNA synthetase beta subunit ATY49_21555 PF02091 Glycyl-tRNA synthetase alpha subunit ATY49_21560 PF00437 Type II/IV secretion system protein ATY49_21560 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ATY49_21575 PF00117 Glutamine amidotransferase class-I ATY49_21575 PF00958 GMP synthase C terminal domain ATY49_21585 PF00902 Sec-independent protein translocase protein (TatC) ATY49_21590 PF02416 mttA/Hcf106 family ATY49_21595 PF02416 mttA/Hcf106 family ATY49_21605 PF00762 Ferrochelatase ATY49_21610 PF12697 Alpha/beta hydrolase family ATY49_21625 PF04381 Putative exonuclease, RdgC ATY49_21630 PF01171 PP-loop family ATY49_21640 PF00356 Bacterial regulatory proteins, lacI family ATY49_21645 PF03648 Glycosyl hydrolase family 67 N-terminus ATY49_21645 PF07488 Glycosyl hydrolase family 67 middle domain ATY49_21645 PF07477 Glycosyl hydrolase family 67 C-terminus ATY49_21655 PF13378 Enolase C-terminal domain-like ATY49_21655 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ATY49_21660 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain ATY49_21660 PF04616 Glycosyl hydrolases family 43 ATY49_21665 PF14310 Fibronectin type III-like domain ATY49_21665 PF01915 Glycosyl hydrolase family 3 C-terminal domain ATY49_21665 PF07691 PA14 domain ATY49_21665 PF00933 Glycosyl hydrolase family 3 N terminal domain ATY49_21670 PF08125 Mannitol dehydrogenase C-terminal domain ATY49_21670 PF01232 Mannitol dehydrogenase Rossmann domain ATY49_21690 PF02614 Glucuronate isomerase ATY49_21695 PF03422 Carbohydrate binding module (family 6) ATY49_21695 PF00331 Glycosyl hydrolase family 10 ATY49_21695 PF00553 Cellulose binding domain ATY49_21700 PF00553 Cellulose binding domain ATY49_21700 PF03422 Carbohydrate binding module (family 6) ATY49_21700 PF00331 Glycosyl hydrolase family 10 ATY49_21725 PF04616 Glycosyl hydrolases family 43 ATY49_21755 PF13340 Putative transposase of IS4/5 family (DUF4096) ATY49_21770 PF00487 Fatty acid desaturase ATY49_21775 PF00970 Oxidoreductase FAD-binding domain ATY49_21775 PF00175 Oxidoreductase NAD-binding domain ATY49_21775 PF00111 2Fe-2S iron-sulfur cluster binding domain ATY49_21780 PF00440 Bacterial regulatory proteins, tetR family ATY49_21815 PF01047 MarR family ATY49_21820 PF02566 OsmC-like protein ATY49_21900 PF01381 Helix-turn-helix ATY49_21905 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB ATY49_21910 PF13538 UvrD-like helicase C-terminal domain ATY49_21915 PF00580 UvrD/REP helicase N-terminal domain ATY49_21915 PF13361 UvrD-like helicase C-terminal domain ATY49_21915 PF12705 PD-(D/E)XK nuclease superfamily ATY49_21920 PF17946 RecC C-terminal domain ATY49_21960 PF00080 Copper/zinc superoxide dismutase (SODC) ATY49_21965 PF00080 Copper/zinc superoxide dismutase (SODC) ATY49_21970 PF00072 Response regulator receiver domain ATY49_21970 PF02954 Bacterial regulatory protein, Fis family ATY49_21970 PF00158 Sigma-54 interaction domain ATY49_21975 PF00512 His Kinase A (phospho-acceptor) domain ATY49_21975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY49_21975 PF00989 PAS fold ATY49_21980 PF00909 Ammonium Transporter Family ATY49_21985 PF00543 Nitrogen regulatory protein P-II ATY49_21990 PF03951 Glutamine synthetase, beta-Grasp domain ATY49_21990 PF00120 Glutamine synthetase, catalytic domain ATY49_21995 PF02673 Bacitracin resistance protein BacA ATY49_22035 PF03061 Thioesterase superfamily ATY49_22040 PF13091 PLD-like domain ATY49_22055 PF01883 Iron-sulfur cluster assembly protein ATY49_22055 PF10609 NUBPL iron-transfer P-loop NTPase ATY49_22075 PF01381 Helix-turn-helix ATY49_22080 PF13657 HipA N-terminal domain ATY49_22080 PF07804 HipA-like C-terminal domain ATY49_22085 PF10017 Histidine-specific methyltransferase, SAM-dependent ATY49_22090 PF03781 Sulfatase-modifying factor enzyme 1 ATY49_22090 PF12867 DinB superfamily ATY49_22100 PF00528 Binding-protein-dependent transport system inner membrane component ATY49_22105 PF00005 ABC transporter ATY49_22105 PF00571 CBS domain ATY49_22120 PF00005 ABC transporter ATY49_22130 PF01734 Patatin-like phospholipase ATY49_22145 PF05598 Transposase domain (DUF772) ATY49_22145 PF01609 Transposase DDE domain ATY49_22150 PF13276 HTH-like domain ATY49_22150 PF13683 Integrase core domain ATY49_22155 PF01527 Transposase ATY49_22170 PF00248 Aldo/keto reductase family ATY49_22175 PF16884 N-terminal domain of oxidoreductase ATY49_22175 PF00107 Zinc-binding dehydrogenase ATY49_22180 PF00248 Aldo/keto reductase family ATY49_22190 PF00849 RNA pseudouridylate synthase ATY49_22205 PF00270 DEAD/DEAH box helicase ATY49_22205 PF00271 Helicase conserved C-terminal domain ATY49_22205 PF08482 ATP-dependent helicase C-terminal ATY49_22205 PF04408 Helicase associated domain (HA2) ATY49_22210 PF07308 Protein of unknown function (DUF1456) ATY49_22215 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ATY49_22215 PF13378 Enolase C-terminal domain-like ATY49_22220 PF01557 Fumarylacetoacetate (FAA) hydrolase family ATY49_22235 PF00248 Aldo/keto reductase family ATY49_22245 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain ATY49_22245 PF04616 Glycosyl hydrolases family 43 ATY49_22265 PF00072 Response regulator receiver domain ATY49_22265 PF00196 Bacterial regulatory proteins, luxR family ATY49_22270 PF00501 AMP-binding enzyme ATY49_22270 PF16177 Acetyl-coenzyme A synthetase N-terminus ATY49_22270 PF13193 AMP-binding enzyme C-terminal domain ATY49_22285 PF04341 Protein of unknown function, DUF485 ATY49_22290 PF00474 Sodium:solute symporter family ATY49_22300 PF03372 Endonuclease/Exonuclease/phosphatase family ATY49_22310 PF04226 Transglycosylase associated protein ATY49_22315 PF01648 4'-phosphopantetheinyl transferase superfamily ATY49_22320 PF16655 PhoD-like phosphatase, N-terminal domain ATY49_22320 PF09423 PhoD-like phosphatase ATY49_22325 PF16655 PhoD-like phosphatase, N-terminal domain ATY49_22325 PF09423 PhoD-like phosphatase ATY49_22330 PF02527 rRNA small subunit methyltransferase G ATY49_22345 PF00830 Ribosomal L28 family ATY49_22350 PF00471 Ribosomal protein L33 ATY49_22370 PF04303 PrpF protein ATY49_22375 PF03737 Aldolase/RraA ATY49_22380 PF03466 LysR substrate binding domain ATY49_22380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY49_22385 PF13396 Phospholipase_D-nuclease N-terminal ATY49_22385 PF13091 PLD-like domain ATY49_22400 PF13361 UvrD-like helicase C-terminal domain ATY49_22400 PF00580 UvrD/REP helicase N-terminal domain ATY49_22415 PF13520 Amino acid permease ATY49_22420 PF02646 RmuC family ATY49_22430 PF00255 Glutathione peroxidase ATY49_22440 PF05598 Transposase domain (DUF772) ATY49_22455 PF04055 Radical SAM superfamily ATY49_22465 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ATY49_22480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATY49_22480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ATY49_22485 PF13180 PDZ domain ATY49_22485 PF03572 Peptidase family S41 ATY49_22490 PF01551 Peptidase family M23 ATY49_22500 PF04389 Peptidase family M28 ATY49_22515 PF05598 Transposase domain (DUF772) ATY49_22550 PF02463 RecF/RecN/SMC N terminal domain ATY49_22555 PF01227 GTP cyclohydrolase I ATY49_22580 PF00083 Sugar (and other) transporter ATY49_22610 PF05598 Transposase domain (DUF772) ATY49_22660 PF02595 Glycerate kinase family ATY49_22665 PF07690 Major Facilitator Superfamily ATY49_22680 PF17785 PUA-like domain ATY49_22680 PF10672 S-adenosylmethionine-dependent methyltransferase ATY49_22685 PF03741 Integral membrane protein TerC family ATY49_22690 PF01694 Rhomboid family ATY49_22695 PF03009 Glycerophosphoryl diester phosphodiesterase family ATY49_22705 PF01569 PAP2 superfamily ATY49_22710 PF10396 GTP-binding protein TrmE N-terminus ATY49_22710 PF12631 MnmE helical domain ATY49_22710 PF01926 50S ribosome-binding GTPase ATY49_22715 PF01522 Polysaccharide deacetylase ATY49_22720 PF14849 YidC periplasmic domain ATY49_22720 PF02096 60Kd inner membrane protein ATY49_22725 PF00825 Ribonuclease P ATY49_22730 PF00468 Ribosomal protein L34