ATY49_00005 SM00382 ATPases associated with a variety of cellular activities ATY49_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain ATY49_00010 SM00480 DNA polymerase III beta subunit ATY49_00020 SM00387 Histidine kinase-like ATPases ATY49_00020 SM00433 TopoisomeraseII ATY49_00035 SM00028 Tetratricopeptide repeats ATY49_00070 SM00155 Phospholipase D. Active site motifs. ATY49_00180 SM01126 ATY49_00180 ATY49_00205 SM00487 DEAD-like helicases superfamily ATY49_00205 SM00490 helicase superfamily c-terminal domain ATY49_00280 SM01126 ATY49_00280 ATY49_00305 SM00642 Alpha-amylase domain ATY49_00315 SM00642 Alpha-amylase domain ATY49_00325 SM00642 Alpha-amylase domain ATY49_00330 SM00642 Alpha-amylase domain ATY49_00340 SM00267 diguanylate cyclase ATY49_00425 SM00382 ATPases associated with a variety of cellular activities ATY49_00535 SM00369 Leucine-rich repeats, typical (most populated) subfamily ATY49_00555 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY49_00650 SM00382 ATPases associated with a variety of cellular activities ATY49_00670 SM01126 ATY49_00670 ATY49_00695 SM00487 DEAD-like helicases superfamily ATY49_00695 SM00490 helicase superfamily c-terminal domain ATY49_00770 SM01126 ATY49_00770 ATY49_00805 SM00354 helix_turn _helix lactose operon repressor ATY49_00825 SM00642 Alpha-amylase domain ATY49_00830 SM00642 Alpha-amylase domain ATY49_00835 SM00642 Alpha-amylase domain ATY49_00885 SM00382 ATPases associated with a variety of cellular activities ATY49_00895 SM00938 Nitrogen regulatory protein P-II ATY49_00975 SM01228 ATY49_00975 ATY49_01040 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY49_01040 SM00388 His Kinase A (phosphoacceptor) domain ATY49_01075 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family ATY49_01095 SM00354 helix_turn _helix lactose operon repressor ATY49_01105 SM00563 Phosphate acyltransferases ATY49_01155 SM00344 helix_turn_helix ASNC type ATY49_01210 SM00829 Enoylreductase ATY49_01270 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY49_01270 SM00091 PAS domain ATY49_01335 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain ATY49_01335 SM01232 ATY49_01335 ATY49_01345 SM01126 ATY49_01345 ATY49_01400 SM00382 ATPases associated with a variety of cellular activities ATY49_01415 SM01126 ATY49_01415 ATY49_01485 SM00564 beta-propeller repeat ATY49_01525 SM00091 PAS domain ATY49_01525 SM00387 Histidine kinase-like ATPases ATY49_01525 SM00388 His Kinase A (phosphoacceptor) domain ATY49_01525 SM00448 cheY-homologous receiver domain ATY49_01535 SM00346 helix_turn_helix isocitrate lyase regulation ATY49_01555 SM01126 ATY49_01555 ATY49_01580 SM00563 Phosphate acyltransferases ATY49_01675 SM01126 ATY49_01675 ATY49_01715 SM00382 ATPases associated with a variety of cellular activities ATY49_01740 SM00530 Helix-turn-helix XRE-family like proteins ATY49_01750 SM00382 ATPases associated with a variety of cellular activities ATY49_01770 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. ATY49_01810 SM01004 Delta-aminolevulinic acid dehydratase ATY49_01825 SM00477 DNA/RNA non-specific endonuclease ATY49_01825 SM00892 DNA/RNA non-specific endonuclease ATY49_01850 SM00491 ATY49_01850 ATY49_01860 SM01126 ATY49_01860 ATY49_01875 SM01060 ATY49_01875 ATY49_01880 SM00248 ankyrin repeats ATY49_01905 SM00448 cheY-homologous receiver domain ATY49_01905 SM00862 Transcriptional regulatory protein, C terminal ATY49_01910 SM00387 Histidine kinase-like ATPases ATY49_01910 SM00388 His Kinase A (phosphoacceptor) domain ATY49_02000 SM00849 Metallo-beta-lactamase superfamily ATY49_02045 SM01060 ATY49_02045 ATY49_02090 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY49_02090 SM00876 Biotin and Thiamin Synthesis associated domain ATY49_02105 SM00822 ATY49_02105 ATY49_02130 SM00825 Beta-ketoacyl synthase ATY49_02140 SM00248 ankyrin repeats ATY49_02145 SM00226 Low molecular weight phosphatase family ATY49_02170 SM00116 Domain in cystathionine beta-synthase and other proteins. ATY49_02170 SM00924 MgtE intracellular N domain ATY49_02180 SM00881 CoA binding domain ATY49_02245 SM00998 Adenylosuccinate lyase C-terminus ATY49_02265 SM00346 helix_turn_helix isocitrate lyase regulation ATY49_02270 SM00090 RIO-like kinase ATY49_02295 SM00836 DALR anticodon binding domain ATY49_02295 SM01016 Arginyl tRNA synthetase N terminal dom ATY49_02325 SM01259 ATY49_02325 ATY49_02345 SM00470 ParB-like nuclease domain ATY49_02430 SM00073 Histidine Phosphotransfer domain ATY49_02430 SM00387 Histidine kinase-like ATPases ATY49_02430 SM00388 His Kinase A (phosphoacceptor) domain ATY49_02430 SM00448 cheY-homologous receiver domain ATY49_02435 SM00052 Putative diguanylate phosphodiesterase ATY49_02435 SM00267 diguanylate cyclase ATY49_02435 SM00448 cheY-homologous receiver domain ATY49_02505 SM00563 Phosphate acyltransferases ATY49_02535 SM01209 ATY49_02535 ATY49_02535 SM01210 ATY49_02535 ATY49_02545 SM00798 AICARFT/IMPCHase bienzyme ATY49_02545 SM00851 MGS-like domain ATY49_02575 SM01126 ATY49_02575 ATY49_02590 SM00530 Helix-turn-helix XRE-family like proteins ATY49_02615 SM00878 Biotin carboxylase C-terminal domain ATY49_02650 SM01126 ATY49_02650 ATY49_02665 SM00487 DEAD-like helicases superfamily ATY49_02665 SM00490 helicase superfamily c-terminal domain ATY49_02720 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain ATY49_02720 SM00437 Bacterial DNA topoisomerase I DNA-binding domain ATY49_02720 SM00493 ATY49_02720 ATY49_02745 SM00257 Lysin motif ATY49_02945 SM01126 ATY49_02945 ATY49_02960 SM00382 ATPases associated with a variety of cellular activities ATY49_03035 SM00382 ATPases associated with a variety of cellular activities ATY49_03035 SM00448 cheY-homologous receiver domain ATY49_03045 SM00448 cheY-homologous receiver domain ATY49_03050 SM00138 Methyltransferase, chemotaxis proteins ATY49_03065 SM00387 Histidine kinase-like ATPases ATY49_03070 SM00448 cheY-homologous receiver domain ATY49_03075 SM00850 LytTr DNA-binding domain ATY49_03140 SM00986 Uracil DNA glycosylase superfamily ATY49_03140 SM00987 UreE urease accessory protein, C-terminal domain ATY49_03145 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. ATY49_03165 SM00382 ATPases associated with a variety of cellular activities ATY49_03200 SM00387 Histidine kinase-like ATPases ATY49_03200 SM00388 His Kinase A (phosphoacceptor) domain ATY49_03205 SM00448 cheY-homologous receiver domain ATY49_03205 SM00862 Transcriptional regulatory protein, C terminal ATY49_03245 SM00344 helix_turn_helix ASNC type ATY49_03255 SM01005 Alanine racemase, C-terminal domain ATY49_03275 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY49_03275 SM00091 PAS domain ATY49_03275 SM00387 Histidine kinase-like ATPases ATY49_03275 SM00388 His Kinase A (phosphoacceptor) domain ATY49_03275 SM00448 cheY-homologous receiver domain ATY49_03350 SM00382 ATPases associated with a variety of cellular activities ATY49_03350 SM00930 ATY49_03350 ATY49_03375 SM00986 Uracil DNA glycosylase superfamily ATY49_03375 SM00987 UreE urease accessory protein, C-terminal domain ATY49_03445 SM00382 ATPases associated with a variety of cellular activities ATY49_03455 SM00830 Chorismate mutase type II ATY49_03480 SM01126 ATY49_03480 ATY49_03575 SM00825 Beta-ketoacyl synthase ATY49_03600 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY49_03625 SM00487 DEAD-like helicases superfamily ATY49_03625 SM00490 helicase superfamily c-terminal domain ATY49_03660 SM00116 Domain in cystathionine beta-synthase and other proteins. ATY49_03715 SM00382 ATPases associated with a variety of cellular activities ATY49_03725 SM00893 Electron transfer flavoprotein domain ATY49_03730 SM00893 Electron transfer flavoprotein domain ATY49_03765 SM00882 Coenzyme A transferase ATY49_03770 SM00882 Coenzyme A transferase ATY49_03800 SM00382 ATPases associated with a variety of cellular activities ATY49_03815 SM00528 Domain in histone-like proteins of HNS family ATY49_03870 SM00656 ATY49_03870 ATY49_03955 SM01211 ATY49_03955 ATY49_03980 SM00382 ATPases associated with a variety of cellular activities ATY49_04045 SM00345 helix_turn_helix gluconate operon transcriptional repressor ATY49_04045 SM00866 ATY49_04045 ATY49_04110 SM00487 DEAD-like helicases superfamily ATY49_04115 SM01126 ATY49_04115 ATY49_04145 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ATY49_04150 SM00822 ATY49_04150 ATY49_04160 SM00825 Beta-ketoacyl synthase ATY49_04195 SM00382 ATPases associated with a variety of cellular activities ATY49_04280 SM00271 DnaJ molecular chaperone homology domain ATY49_04285 SM00448 cheY-homologous receiver domain ATY49_04290 SM00244 prohibitin homologues ATY49_04295 SM00244 prohibitin homologues ATY49_04305 SM00788 Adenylosuccinate synthetase ATY49_04415 SM01329 ATY49_04415 ATY49_04420 SM00917 LeuA allosteric (dimerisation) domain ATY49_04450 SM00862 Transcriptional regulatory protein, C terminal ATY49_04455 SM00342 helix_turn_helix, arabinose operon control protein ATY49_04485 SM01126 ATY49_04485 ATY49_04495 SM01126 ATY49_04495 ATY49_04515 SM00464 Found in ATP-dependent protease La (LON) ATY49_04550 SM00838 Elongation factor G C-terminus ATY49_04630 SM01126 ATY49_04630 ATY49_04685 SM01126 ATY49_04685 ATY49_04770 SM01126 ATY49_04770 ATY49_04775 SM01329 ATY49_04775 ATY49_04840 SM00382 ATPases associated with a variety of cellular activities ATY49_04840 SM00994 ClpX C4-type zinc finger ATY49_04840 SM01086 C-terminal, D2-small domain, of ClpB protein ATY49_04845 SM00382 ATPases associated with a variety of cellular activities ATY49_04845 SM00464 Found in ATP-dependent protease La (LON) ATY49_04850 SM00411 bacterial (prokaryotic) histone like domain ATY49_04875 SM00257 Lysin motif ATY49_04880 SM00849 Metallo-beta-lactamase superfamily ATY49_04895 SM00479 ATY49_04895 ATY49_04900 SM00331 Sigma factor PP2C-like phosphatases ATY49_04900 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ATY49_04960 SM01126 ATY49_04960 ATY49_04985 SM00849 Metallo-beta-lactamase superfamily ATY49_04990 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY49_05015 SM00530 Helix-turn-helix XRE-family like proteins ATY49_05085 SM00382 ATPases associated with a variety of cellular activities ATY49_05095 SM00493 ATY49_05095 ATY49_05110 SM00460 Transglutaminase/protease-like homologues ATY49_05120 SM00382 ATPases associated with a variety of cellular activities ATY49_05195 SM00450 Rhodanese Homology Domain ATY49_05225 SM01154 ATY49_05225 ATY49_05235 SM00642 Alpha-amylase domain ATY49_05250 SM00354 helix_turn _helix lactose operon repressor ATY49_05255 SM00822 ATY49_05255 ATY49_05270 SM00448 cheY-homologous receiver domain ATY49_05270 SM00862 Transcriptional regulatory protein, C terminal ATY49_05275 SM00387 Histidine kinase-like ATPases ATY49_05275 SM00388 His Kinase A (phosphoacceptor) domain ATY49_05285 SM00421 helix_turn_helix, Lux Regulon ATY49_05285 SM00448 cheY-homologous receiver domain ATY49_05315 SM00387 Histidine kinase-like ATPases ATY49_05315 SM00388 His Kinase A (phosphoacceptor) domain ATY49_05315 SM00448 cheY-homologous receiver domain ATY49_05330 SM00919 Malic enzyme, NAD binding domain ATY49_05330 SM01274 ATY49_05330 ATY49_05415 SM01011 Aminopeptidase P, N-terminal domain ATY49_05450 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY49_05475 SM00072 Guanylate kinase homologues. ATY49_05485 SM01409 ATY49_05485 ATY49_05490 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY49_05490 SM00954 Region found in RelA / SpoT proteins ATY49_05500 SM00487 DEAD-like helicases superfamily ATY49_05500 SM00490 helicase superfamily c-terminal domain ATY49_05555 SM00965 Secretin and TonB N terminus short domain ATY49_05590 SM00327 von Willebrand factor (vWF) type A domain ATY49_05595 SM00028 Tetratricopeptide repeats ATY49_05595 SM00327 von Willebrand factor (vWF) type A domain ATY49_05615 SM00861 Transketolase, pyrimidine binding domain ATY49_05675 SM00448 cheY-homologous receiver domain ATY49_05675 SM00862 Transcriptional regulatory protein, C terminal ATY49_05680 SM00387 Histidine kinase-like ATPases ATY49_05680 SM00388 His Kinase A (phosphoacceptor) domain ATY49_05700 SM00382 ATPases associated with a variety of cellular activities ATY49_05715 SM00849 Metallo-beta-lactamase superfamily ATY49_05750 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ATY49_05765 SM01126 ATY49_05765 ATY49_05770 SM00387 Histidine kinase-like ATPases ATY49_05770 SM00388 His Kinase A (phosphoacceptor) domain ATY49_05775 SM00448 cheY-homologous receiver domain ATY49_05775 SM00862 Transcriptional regulatory protein, C terminal ATY49_06250 SM00014 Acid phosphatase homologues ATY49_06260 SM00387 Histidine kinase-like ATPases ATY49_06265 SM00448 cheY-homologous receiver domain ATY49_06275 SM00316 Ribosomal protein S1-like RNA-binding domain ATY49_06275 SM00732 Likely ribonuclease with RNase H fold. ATY49_06360 SM00479 ATY49_06360 ATY49_06370 SM00529 Helix-turn-helix diphteria tox regulatory element ATY49_06380 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY49_06430 SM00116 Domain in cystathionine beta-synthase and other proteins. ATY49_06430 SM01240 ATY49_06430 ATY49_06480 SM00822 ATY49_06480 ATY49_06500 SM00411 bacterial (prokaryotic) histone like domain ATY49_06505 SM00316 Ribosomal protein S1-like RNA-binding domain ATY49_06575 SM00354 helix_turn _helix lactose operon repressor ATY49_06600 SM00363 S4 RNA-binding domain ATY49_06615 SM01126 ATY49_06615 ATY49_06630 SM00382 ATPases associated with a variety of cellular activities ATY49_06715 SM01007 Class II Aldolase and Adducin N-terminal domain ATY49_06870 SM01126 ATY49_06870 ATY49_06890 SM01126 ATY49_06890 ATY49_06935 SM01126 ATY49_06935 ATY49_06955 SM00967 RNA 2'-O ribose methyltransferase substrate binding ATY49_06975 SM00316 Ribosomal protein S1-like RNA-binding domain ATY49_06975 SM00357 Cold shock protein domain ATY49_06975 SM00955 ATY49_06975 ATY49_07000 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ATY49_07010 SM01018 B12 binding domain ATY49_07030 SM00354 helix_turn _helix lactose operon repressor ATY49_07050 SM00984 UDP binding domain ATY49_07070 SM00345 helix_turn_helix gluconate operon transcriptional repressor ATY49_07075 SM00382 ATPases associated with a variety of cellular activities ATY49_07155 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY49_07160 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. ATY49_07170 SM00861 Transketolase, pyrimidine binding domain ATY49_07195 SM00382 ATPases associated with a variety of cellular activities ATY49_07225 SM00271 DnaJ molecular chaperone homology domain ATY49_07295 SM00507 HNH nucleases ATY49_07300 SM00861 Transketolase, pyrimidine binding domain ATY49_07325 SM01126 ATY49_07325 ATY49_07370 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY49_07380 SM00434 DNA Topoisomerase IV ATY49_07405 SM00710 Parallel beta-helix repeats ATY49_07405 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses ATY49_07410 SM01172 ATY49_07410 ATY49_07440 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY49_07450 SM00972 Spore Coat Protein U domain ATY49_07465 SM00972 Spore Coat Protein U domain ATY49_07520 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY49_07555 SM00481 DNA polymerase alpha chain like domain ATY49_07575 SM00382 ATPases associated with a variety of cellular activities ATY49_07905 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ATY49_07910 SM00869 Autotransporter beta-domain ATY49_07930 SM00267 diguanylate cyclase ATY49_07960 SM00487 DEAD-like helicases superfamily ATY49_07960 SM00490 helicase superfamily c-terminal domain ATY49_07985 SM00357 Cold shock protein domain ATY49_08030 SM01118 ATY49_08030 ATY49_08040 SM00448 cheY-homologous receiver domain ATY49_08055 SM00358 Double-stranded RNA binding motif ATY49_08055 SM00535 Ribonuclease III family ATY49_08070 SM00838 Elongation factor G C-terminus ATY49_08075 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY49_08125 SM00530 Helix-turn-helix XRE-family like proteins ATY49_08155 SM00812 Alpha-L-fucosidase ATY49_08175 SM00387 Histidine kinase-like ATPases ATY49_08175 SM00388 His Kinase A (phosphoacceptor) domain ATY49_08175 SM00448 cheY-homologous receiver domain ATY49_08180 SM00387 Histidine kinase-like ATPases ATY49_08180 SM00388 His Kinase A (phosphoacceptor) domain ATY49_08180 SM00448 cheY-homologous receiver domain ATY49_08185 SM00387 Histidine kinase-like ATPases ATY49_08185 SM00388 His Kinase A (phosphoacceptor) domain ATY49_08185 SM00448 cheY-homologous receiver domain ATY49_08190 SM00867 YceI-like domain ATY49_08200 SM00867 YceI-like domain ATY49_08250 SM00116 Domain in cystathionine beta-synthase and other proteins. ATY49_08330 SM00244 prohibitin homologues ATY49_08375 SM00812 Alpha-L-fucosidase ATY49_08380 SM00636 ATY49_08380 ATY49_08395 SM00758 ATY49_08395 ATY49_08395 SM01217 ATY49_08395 ATY49_08400 SM00382 ATPases associated with a variety of cellular activities ATY49_08450 SM01149 ATY49_08450 ATY49_08500 SM00369 Leucine-rich repeats, typical (most populated) subfamily ATY49_08525 SM00327 von Willebrand factor (vWF) type A domain ATY49_08545 SM00260 Two component signalling adaptor domain ATY49_08555 SM00073 Histidine Phosphotransfer domain ATY49_08555 SM00260 Two component signalling adaptor domain ATY49_08555 SM00387 Histidine kinase-like ATPases ATY49_08555 SM00448 cheY-homologous receiver domain ATY49_08555 SM01231 ATY49_08555 ATY49_08560 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY49_08565 SM00260 Two component signalling adaptor domain ATY49_08570 SM00448 cheY-homologous receiver domain ATY49_08575 SM00448 cheY-homologous receiver domain ATY49_08600 SM00491 ATY49_08600 ATY49_08625 SM00954 Region found in RelA / SpoT proteins ATY49_08690 SM00382 ATPases associated with a variety of cellular activities ATY49_08690 SM00487 DEAD-like helicases superfamily ATY49_08690 SM00490 helicase superfamily c-terminal domain ATY49_08690 SM00847 Helicase associated domain (HA2) Add an annotation ATY49_08700 SM00341 Helicase and RNase D C-terminal ATY49_08700 SM00487 DEAD-like helicases superfamily ATY49_08700 SM00490 helicase superfamily c-terminal domain ATY49_08700 SM00956 ATY49_08700 ATY49_08710 SM00448 cheY-homologous receiver domain ATY49_08820 SM00382 ATPases associated with a variety of cellular activities ATY49_08830 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ATY49_08865 SM00834 Putative regulatory protein ATY49_08905 SM00382 ATPases associated with a variety of cellular activities ATY49_08930 SM00533 DNA-binding domain of DNA mismatch repair MUTS family ATY49_08930 SM00534 ATPase domain of DNA mismatch repair MUTS family ATY49_08980 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY49_09025 SM00904 Riboflavin kinase ATY49_09205 SM00881 CoA binding domain ATY49_09215 SM00387 Histidine kinase-like ATPases ATY49_09215 SM00388 His Kinase A (phosphoacceptor) domain ATY49_09220 SM00382 ATPases associated with a variety of cellular activities ATY49_09220 SM00448 cheY-homologous receiver domain ATY49_09330 SM00382 ATPases associated with a variety of cellular activities ATY49_09360 SM00448 cheY-homologous receiver domain ATY49_09360 SM00862 Transcriptional regulatory protein, C terminal ATY49_09365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY49_09365 SM00387 Histidine kinase-like ATPases ATY49_09365 SM00388 His Kinase A (phosphoacceptor) domain ATY49_09395 SM00363 S4 RNA-binding domain ATY49_09400 SM00052 Putative diguanylate phosphodiesterase ATY49_09400 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY49_09400 SM00091 PAS domain ATY49_09400 SM00267 diguanylate cyclase ATY49_09405 SM00487 DEAD-like helicases superfamily ATY49_09405 SM00490 helicase superfamily c-terminal domain ATY49_09450 SM00342 helix_turn_helix, arabinose operon control protein ATY49_09450 SM00478 endonuclease III ATY49_09450 SM01009 AlkA N-terminal domain ATY49_09470 SM00829 Enoylreductase ATY49_09595 SM00357 Cold shock protein domain ATY49_09650 SM00645 Papain family cysteine protease ATY49_09665 SM00645 Papain family cysteine protease ATY49_09685 SM00645 Papain family cysteine protease ATY49_09700 SM00387 Histidine kinase-like ATPases ATY49_09700 SM00388 His Kinase A (phosphoacceptor) domain ATY49_09725 SM00487 DEAD-like helicases superfamily ATY49_09725 SM00490 helicase superfamily c-terminal domain ATY49_09725 SM00982 ATY49_09725 ATY49_09725 SM01058 CarD-like/TRCF domain ATY49_09735 SM00073 Histidine Phosphotransfer domain ATY49_09735 SM00260 Two component signalling adaptor domain ATY49_09735 SM00387 Histidine kinase-like ATPases ATY49_09735 SM01231 ATY49_09735 ATY49_09740 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY49_09740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY49_09745 SM00260 Two component signalling adaptor domain ATY49_09750 SM00052 Putative diguanylate phosphodiesterase ATY49_09750 SM00448 cheY-homologous receiver domain ATY49_09755 SM00138 Methyltransferase, chemotaxis proteins ATY49_09760 SM00448 cheY-homologous receiver domain ATY49_09780 SM00855 Phosphoglycerate mutase family ATY49_09890 SM01126 ATY49_09890 ATY49_09905 SM00829 Enoylreductase ATY49_09910 SM00267 diguanylate cyclase ATY49_09985 SM00732 Likely ribonuclease with RNase H fold. ATY49_10025 SM00382 ATPases associated with a variety of cellular activities ATY49_10045 SM00411 bacterial (prokaryotic) histone like domain ATY49_10080 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain ATY49_10095 SM00382 ATPases associated with a variety of cellular activities ATY49_10135 SM01126 ATY49_10135 ATY49_10195 SM00342 helix_turn_helix, arabinose operon control protein ATY49_10200 SM00862 Transcriptional regulatory protein, C terminal ATY49_10245 SM00382 ATPases associated with a variety of cellular activities ATY49_10325 SM00855 Phosphoglycerate mutase family ATY49_10395 SM00382 ATPases associated with a variety of cellular activities ATY49_10395 SM01086 C-terminal, D2-small domain, of ClpB protein ATY49_10420 SM00363 S4 RNA-binding domain ATY49_10465 SM00382 ATPases associated with a variety of cellular activities ATY49_10465 SM00962 SRP54-type protein, GTPase domain ATY49_10465 SM00963 SRP54-type protein, helical bundle domain ATY49_10485 SM00813 Alpha-L-arabinofuranosidase C-terminus ATY49_10625 SM00116 Domain in cystathionine beta-synthase and other proteins. ATY49_10645 SM00382 ATPases associated with a variety of cellular activities ATY49_10690 SM00924 MgtE intracellular N domain ATY49_10725 SM00421 helix_turn_helix, Lux Regulon ATY49_10750 SM00849 Metallo-beta-lactamase superfamily ATY49_10760 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. ATY49_10785 SM00422 helix_turn_helix, mercury resistance ATY49_11025 SM01126 ATY49_11025 ATY49_11070 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ATY49_11070 SM00465 GIY-YIG type nucleases (URI domain) ATY49_11080 SM00226 Low molecular weight phosphatase family ATY49_11095 SM00382 ATPases associated with a variety of cellular activities ATY49_11110 SM00849 Metallo-beta-lactamase superfamily ATY49_11115 SM01126 ATY49_11115 ATY49_11125 SM00382 ATPases associated with a variety of cellular activities ATY49_11175 SM00382 ATPases associated with a variety of cellular activities ATY49_11230 SM00448 cheY-homologous receiver domain ATY49_11235 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY49_11235 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY49_11235 SM00091 PAS domain ATY49_11235 SM00387 Histidine kinase-like ATPases ATY49_11235 SM00388 His Kinase A (phosphoacceptor) domain ATY49_11235 SM00448 cheY-homologous receiver domain ATY49_11265 SM00267 diguanylate cyclase ATY49_11310 SM00382 ATPases associated with a variety of cellular activities ATY49_11355 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY49_11385 SM00631 ATY49_11385 ATY49_11390 SM01217 ATY49_11390 ATY49_11405 SM00052 Putative diguanylate phosphodiesterase ATY49_11405 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY49_11405 SM00267 diguanylate cyclase ATY49_11475 SM00646 ATY49_11475 ATY49_11505 SM00869 Autotransporter beta-domain ATY49_11525 SM00387 Histidine kinase-like ATPases ATY49_11525 SM00388 His Kinase A (phosphoacceptor) domain ATY49_11530 SM00421 helix_turn_helix, Lux Regulon ATY49_11530 SM00448 cheY-homologous receiver domain ATY49_11535 SM00869 Autotransporter beta-domain ATY49_11555 SM00830 Chorismate mutase type II ATY49_11575 SM00240 Forkhead associated domain ATY49_11595 SM00345 helix_turn_helix gluconate operon transcriptional repressor ATY49_11595 SM00866 ATY49_11595 ATY49_11645 SM00434 DNA Topoisomerase IV ATY49_11665 SM00292 breast cancer carboxy-terminal domain ATY49_11665 SM00532 Ligase N family ATY49_11675 SM00771 ZipA, C-terminal domain (FtsZ-binding) ATY49_11680 SM00968 SMC proteins Flexible Hinge Domain ATY49_11735 SM00947 Carbonic anhydrase ATY49_11760 SM00479 ATY49_11760 ATY49_11790 SM00981 ATY49_11790 ATY49_11805 SM00382 ATPases associated with a variety of cellular activities ATY49_11825 SM00644 ATY49_11825 ATY49_11835 SM00450 Rhodanese Homology Domain ATY49_11860 SM00478 endonuclease III ATY49_11870 SM00947 Carbonic anhydrase ATY49_11925 SM00382 ATPases associated with a variety of cellular activities ATY49_11940 SM00479 ATY49_11940 ATY49_11995 SM01323 ATY49_11995 ATY49_12010 SM00344 helix_turn_helix ASNC type ATY49_12115 SM00387 Histidine kinase-like ATPases ATY49_12135 SM00450 Rhodanese Homology Domain ATY49_12145 SM01126 ATY49_12145 ATY49_12205 SM00852 Probable molybdopterin binding domain ATY49_12210 SM00382 ATPases associated with a variety of cellular activities ATY49_12215 SM00564 beta-propeller repeat ATY49_12230 SM00028 Tetratricopeptide repeats ATY49_12240 SM00562 ATY49_12240 ATY49_12280 SM00382 ATPases associated with a variety of cellular activities ATY49_12300 SM00382 ATPases associated with a variety of cellular activities ATY49_12300 SM00843 ATY49_12300 ATY49_12330 SM00316 Ribosomal protein S1-like RNA-binding domain ATY49_12335 SM00382 ATPases associated with a variety of cellular activities ATY49_12335 SM01086 C-terminal, D2-small domain, of ClpB protein ATY49_12360 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY49_12375 SM00052 Putative diguanylate phosphodiesterase ATY49_12375 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY49_12375 SM00091 PAS domain ATY49_12375 SM00267 diguanylate cyclase ATY49_12380 SM00091 PAS domain ATY49_12380 SM00387 Histidine kinase-like ATPases ATY49_12385 SM00052 Putative diguanylate phosphodiesterase ATY49_12385 SM00267 diguanylate cyclase ATY49_12385 SM00448 cheY-homologous receiver domain ATY49_12390 SM00387 Histidine kinase-like ATPases ATY49_12405 SM00858 ATY49_12405 ATY49_12410 SM00260 Two component signalling adaptor domain ATY49_12410 SM00448 cheY-homologous receiver domain ATY49_12455 SM00047 Lysozyme subfamily 2 ATY49_12495 SM00421 helix_turn_helix, Lux Regulon ATY49_12495 SM00448 cheY-homologous receiver domain ATY49_12505 SM00448 cheY-homologous receiver domain ATY49_12510 SM00382 ATPases associated with a variety of cellular activities ATY49_12530 SM00822 ATY49_12530 ATY49_12535 SM00822 ATY49_12535 ATY49_12585 SM00382 ATPases associated with a variety of cellular activities ATY49_12635 SM00267 diguanylate cyclase ATY49_12640 SM00267 diguanylate cyclase ATY49_12645 SM00052 Putative diguanylate phosphodiesterase ATY49_12645 SM00267 diguanylate cyclase ATY49_12660 SM00382 ATPases associated with a variety of cellular activities ATY49_12660 SM00962 SRP54-type protein, GTPase domain ATY49_12675 SM00448 cheY-homologous receiver domain ATY49_12685 SM00073 Histidine Phosphotransfer domain ATY49_12685 SM00260 Two component signalling adaptor domain ATY49_12685 SM00387 Histidine kinase-like ATPases ATY49_12685 SM01231 ATY49_12685 ATY49_12825 SM01126 ATY49_12825 ATY49_12840 SM00382 ATPases associated with a variety of cellular activities ATY49_12845 SM00382 ATPases associated with a variety of cellular activities ATY49_12880 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ATY49_12890 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase ATY49_12910 SM00859 Semialdehyde dehydrogenase, NAD binding domain ATY49_12950 SM00840 ATY49_12950 ATY49_12965 SM00245 tail specific protease ATY49_12980 SM01234 ATY49_12980 ATY49_13085 SM00841 Elongation factor P, C-terminal ATY49_13085 SM01185 ATY49_13085 ATY49_13095 SM00052 Putative diguanylate phosphodiesterase ATY49_13095 SM00267 diguanylate cyclase ATY49_13095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY49_13135 SM00382 ATPases associated with a variety of cellular activities ATY49_13140 SM00382 ATPases associated with a variety of cellular activities ATY49_13140 SM00487 DEAD-like helicases superfamily ATY49_13140 SM00490 helicase superfamily c-terminal domain ATY49_13165 SM00357 Cold shock protein domain ATY49_13175 SM01322 ATY49_13175 ATY49_13185 SM00052 Putative diguanylate phosphodiesterase ATY49_13185 SM00267 diguanylate cyclase ATY49_13200 SM00822 ATY49_13200 ATY49_13220 SM00853 MutL C terminal dimerisation domain ATY49_13220 SM01340 ATY49_13220 ATY49_13225 SM00646 ATY49_13225 ATY49_13275 SM00474 3'-5' exonuclease ATY49_13290 SM00528 Domain in histone-like proteins of HNS family ATY49_13325 SM01126 ATY49_13325 ATY49_13395 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY49_13420 SM00116 Domain in cystathionine beta-synthase and other proteins. ATY49_13420 SM01091 Transporter associated domain ATY49_13480 SM01230 ATY49_13480 ATY49_13490 SM01230 ATY49_13490 ATY49_13500 SM00267 diguanylate cyclase ATY49_13500 SM00448 cheY-homologous receiver domain ATY49_13565 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY49_13565 SM00091 PAS domain ATY49_13565 SM00387 Histidine kinase-like ATPases ATY49_13565 SM00388 His Kinase A (phosphoacceptor) domain ATY49_13565 SM00448 cheY-homologous receiver domain ATY49_13565 SM01079 ATY49_13565 ATY49_13570 SM00448 cheY-homologous receiver domain ATY49_13570 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY49_13605 SM01126 ATY49_13605 ATY49_13615 SM00354 helix_turn _helix lactose operon repressor ATY49_13810 SM00260 Two component signalling adaptor domain ATY49_13820 SM00448 cheY-homologous receiver domain ATY49_13825 SM00073 Histidine Phosphotransfer domain ATY49_13825 SM00260 Two component signalling adaptor domain ATY49_13825 SM00387 Histidine kinase-like ATPases ATY49_13825 SM01231 ATY49_13825 ATY49_13850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY49_13855 SM01126 ATY49_13855 ATY49_13860 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY49_13860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY49_13865 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY49_13865 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY49_13870 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY49_13870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY49_13875 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY49_13875 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY49_13880 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY49_13880 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY49_13890 SM00260 Two component signalling adaptor domain ATY49_13915 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY49_13915 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY49_13920 SM00138 Methyltransferase, chemotaxis proteins ATY49_13930 SM00448 cheY-homologous receiver domain ATY49_13935 SM00052 Putative diguanylate phosphodiesterase ATY49_13935 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY49_13935 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY49_13935 SM00091 PAS domain ATY49_13935 SM00267 diguanylate cyclase ATY49_13955 SM00966 SpoVT / AbrB like domain ATY49_13980 SM00073 Histidine Phosphotransfer domain ATY49_13980 SM00387 Histidine kinase-like ATPases ATY49_13980 SM00388 His Kinase A (phosphoacceptor) domain ATY49_13980 SM00448 cheY-homologous receiver domain ATY49_13990 SM00448 cheY-homologous receiver domain ATY49_13990 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY49_14000 SM00937 ATY49_14000 ATY49_14005 SM00850 LytTr DNA-binding domain ATY49_14045 SM00851 MGS-like domain ATY49_14045 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ATY49_14055 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain ATY49_14105 SM00899 ATY49_14105 ATY49_14125 SM00822 ATY49_14125 ATY49_14130 SM00841 Elongation factor P, C-terminal ATY49_14130 SM01185 ATY49_14130 ATY49_14180 SM00758 ATY49_14180 ATY49_14200 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ATY49_14225 SM01130 ATY49_14225 ATY49_14245 SM00670 Large family of predicted nucleotide-binding domains ATY49_14340 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ATY49_14350 SM00382 ATPases associated with a variety of cellular activities ATY49_14390 SM00382 ATPases associated with a variety of cellular activities ATY49_14400 SM01103 ATY49_14400 ATY49_14410 SM00257 Lysin motif ATY49_14430 SM00463 Small MutS-related domain ATY49_14455 SM01192 ATY49_14455 ATY49_14455 SM01193 ATY49_14455 ATY49_14480 SM00387 Histidine kinase-like ATPases ATY49_14480 SM00433 TopoisomeraseII ATY49_14515 SM01091 Transporter associated domain ATY49_14540 SM00382 ATPases associated with a variety of cellular activities ATY49_14550 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY49_14805 SM00448 cheY-homologous receiver domain ATY49_14805 SM00862 Transcriptional regulatory protein, C terminal ATY49_14815 SM00387 Histidine kinase-like ATPases ATY49_14855 SM00331 Sigma factor PP2C-like phosphatases ATY49_14855 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ATY49_14880 SM00240 Forkhead associated domain ATY49_14910 SM00382 ATPases associated with a variety of cellular activities ATY49_14910 SM01086 C-terminal, D2-small domain, of ClpB protein ATY49_15045 SM00363 S4 RNA-binding domain ATY49_15050 SM00316 Ribosomal protein S1-like RNA-binding domain ATY49_15065 SM00421 helix_turn_helix, Lux Regulon ATY49_15065 SM00448 cheY-homologous receiver domain ATY49_15070 SM00450 Rhodanese Homology Domain ATY49_15095 SM00984 UDP binding domain ATY49_15145 SM01126 ATY49_15145 ATY49_15155 SM01126 ATY49_15155 ATY49_15165 SM01012 ATY49_15165 ATY49_15205 SM00852 Probable molybdopterin binding domain ATY49_15305 SM00944 Pro-kumamolisin, activation domain ATY49_15370 SM01130 ATY49_15370 ATY49_15395 SM00342 helix_turn_helix, arabinose operon control protein ATY49_15400 SM00382 ATPases associated with a variety of cellular activities ATY49_15400 SM00962 SRP54-type protein, GTPase domain ATY49_15400 SM00963 SRP54-type protein, helical bundle domain ATY49_15410 SM00478 endonuclease III ATY49_15420 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY49_15420 SM00091 PAS domain ATY49_15420 SM00387 Histidine kinase-like ATPases ATY49_15420 SM00388 His Kinase A (phosphoacceptor) domain ATY49_15420 SM00448 cheY-homologous receiver domain ATY49_15450 SM01126 ATY49_15450 ATY49_15595 SM00422 helix_turn_helix, mercury resistance ATY49_15600 SM00411 bacterial (prokaryotic) histone like domain ATY49_15605 SM00873 B3/4 domain ATY49_15605 SM00874 tRNA synthetase B5 domain ATY49_15605 SM00896 Ferredoxin-fold anticodon binding domain ATY49_15630 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ATY49_15660 SM00487 DEAD-like helicases superfamily ATY49_15660 SM00490 helicase superfamily c-terminal domain ATY49_15740 SM01001 AIR carboxylase ATY49_15760 SM00316 Ribosomal protein S1-like RNA-binding domain ATY49_15760 SM00322 K homology RNA-binding domain ATY49_15765 SM01387 ATY49_15765 ATY49_15785 SM00316 Ribosomal protein S1-like RNA-binding domain ATY49_15785 SM00322 K homology RNA-binding domain ATY49_15835 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ATY49_15840 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ATY49_15885 SM00822 ATY49_15885 ATY49_15915 SM00052 Putative diguanylate phosphodiesterase ATY49_15915 SM00267 diguanylate cyclase ATY49_15915 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY49_15980 SM00859 Semialdehyde dehydrogenase, NAD binding domain ATY49_16010 SM00257 Lysin motif ATY49_16040 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY49_16080 SM01160 ATY49_16080 ATY49_16090 SM01126 ATY49_16090 ATY49_16140 SM00098 Alkaline phosphatase homologues ATY49_16145 SM00977 TilS substrate C-terminal domain ATY49_16200 SM00316 Ribosomal protein S1-like RNA-binding domain ATY49_16280 SM01126 ATY49_16280 ATY49_16330 SM01126 ATY49_16330 ATY49_16345 SM00642 Alpha-amylase domain ATY49_16365 SM01126 ATY49_16365 ATY49_16400 SM00528 Domain in histone-like proteins of HNS family ATY49_16440 SM01126 ATY49_16440 ATY49_16450 SM00869 Autotransporter beta-domain ATY49_16535 SM00967 RNA 2'-O ribose methyltransferase substrate binding ATY49_16555 SM01126 ATY49_16555 ATY49_16620 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY49_16620 SM00387 Histidine kinase-like ATPases ATY49_16655 SM00506 Appr-1"-p processing enzyme ATY49_16705 SM01060 ATY49_16705 ATY49_16725 SM01126 ATY49_16725 ATY49_16740 SM00091 PAS domain ATY49_16740 SM00342 helix_turn_helix, arabinose operon control protein ATY49_16790 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY49_16795 SM00481 DNA polymerase alpha chain like domain ATY49_16815 SM00966 SpoVT / AbrB like domain ATY49_16840 SM00855 Phosphoglycerate mutase family ATY49_16870 SM00220 Serine/Threonine protein kinases, catalytic domain ATY49_16880 SM00487 DEAD-like helicases superfamily ATY49_16915 SM00487 DEAD-like helicases superfamily ATY49_16915 SM00490 helicase superfamily c-terminal domain ATY49_17015 SM00382 ATPases associated with a variety of cellular activities ATY49_17015 SM01086 C-terminal, D2-small domain, of ClpB protein ATY49_17300 SM00478 endonuclease III ATY49_17315 SM00421 helix_turn_helix, Lux Regulon ATY49_17315 SM00448 cheY-homologous receiver domain ATY49_17350 SM00387 Histidine kinase-like ATPases ATY49_17350 SM00388 His Kinase A (phosphoacceptor) domain ATY49_17355 SM00448 cheY-homologous receiver domain ATY49_17355 SM00862 Transcriptional regulatory protein, C terminal ATY49_17390 SM00382 ATPases associated with a variety of cellular activities ATY49_17420 SM00990 ATY49_17420 ATY49_17475 SM00662 RNA polymerases D ATY49_17480 SM00363 S4 RNA-binding domain ATY49_17480 SM01390 ATY49_17480 ATY49_17540 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ATY49_17545 SM01374 ATY49_17545 ATY49_17565 SM00322 K homology RNA-binding domain ATY49_17580 SM01382 ATY49_17580 ATY49_17580 SM01383 ATY49_17580 ATY49_17600 SM01403 ATY49_17600 ATY49_17615 SM00838 Elongation factor G C-terminus ATY49_17615 SM00889 Elongation factor G, domain IV ATY49_17630 SM00663 RNA polymerase I subunit A N-terminus ATY49_17655 SM00649 Ribosomal protein L11/L12 ATY49_17660 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. ATY49_17660 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ATY49_17710 SM01400 ATY49_17710 ATY49_17730 SM00028 Tetratricopeptide repeats ATY49_17740 SM00937 ATY49_17740 ATY49_17745 SM00028 Tetratricopeptide repeats ATY49_17750 SM00852 Probable molybdopterin binding domain ATY49_17865 SM01002 Alanine dehydrogenase/PNT, C-terminal domain ATY49_17865 SM01003 Alanine dehydrogenase/PNT, N-terminal domain ATY49_17880 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ATY49_17880 SM00475 5'-3' exonuclease ATY49_17955 SM01126 ATY49_17955 ATY49_18015 SM00448 cheY-homologous receiver domain ATY49_18015 SM00862 Transcriptional regulatory protein, C terminal ATY49_18020 SM00387 Histidine kinase-like ATPases ATY49_18020 SM00388 His Kinase A (phosphoacceptor) domain ATY49_18040 SM00014 Acid phosphatase homologues ATY49_18080 SM00855 Phosphoglycerate mutase family ATY49_18100 SM00829 Enoylreductase ATY49_18110 SM00382 ATPases associated with a variety of cellular activities ATY49_18155 SM00829 Enoylreductase ATY49_18200 SM00387 Histidine kinase-like ATPases ATY49_18200 SM00448 cheY-homologous receiver domain ATY49_18205 SM00448 cheY-homologous receiver domain ATY49_18305 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY49_18350 SM01126 ATY49_18350 ATY49_18405 SM00650 Ribosomal RNA adenine dimethylases ATY49_18465 SM00387 Histidine kinase-like ATPases ATY49_18465 SM00388 His Kinase A (phosphoacceptor) domain ATY49_18470 SM00448 cheY-homologous receiver domain ATY49_18470 SM00862 Transcriptional regulatory protein, C terminal ATY49_18480 SM00382 ATPases associated with a variety of cellular activities ATY49_18500 SM00382 ATPases associated with a variety of cellular activities ATY49_18620 SM00996 S-adenosyl-L-homocysteine hydrolase ATY49_18620 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ATY49_18675 SM00829 Enoylreductase ATY49_18705 SM00957 SecA DEAD-like domain ATY49_18705 SM00958 SecA preprotein cross-linking domain ATY49_18725 SM00864 Tubulin/FtsZ family, GTPase domain ATY49_18725 SM00865 Tubulin/FtsZ family, C-terminal domain ATY49_18730 SM00842 Cell division protein FtsA ATY49_18830 SM00448 cheY-homologous receiver domain ATY49_18830 SM00862 Transcriptional regulatory protein, C terminal ATY49_18835 SM00387 Histidine kinase-like ATPases ATY49_18835 SM00388 His Kinase A (phosphoacceptor) domain ATY49_18945 SM00382 ATPases associated with a variety of cellular activities ATY49_18975 SM00829 Enoylreductase ATY49_18990 SM00448 cheY-homologous receiver domain ATY49_18990 SM00862 Transcriptional regulatory protein, C terminal ATY49_18995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY49_18995 SM00387 Histidine kinase-like ATPases ATY49_18995 SM00388 His Kinase A (phosphoacceptor) domain ATY49_19135 SM01126 ATY49_19135 ATY49_19165 SM01126 ATY49_19165 ATY49_19205 SM00354 helix_turn _helix lactose operon repressor ATY49_19215 SM00345 helix_turn_helix gluconate operon transcriptional repressor ATY49_19215 SM00866 ATY49_19215 ATY49_19270 SM00387 Histidine kinase-like ATPases ATY49_19270 SM00388 His Kinase A (phosphoacceptor) domain ATY49_19270 SM00448 cheY-homologous receiver domain ATY49_19275 SM00448 cheY-homologous receiver domain ATY49_19280 SM00387 Histidine kinase-like ATPases ATY49_19280 SM00388 His Kinase A (phosphoacceptor) domain ATY49_19285 SM00749 bacterial OsmY and nodulation domain ATY49_19295 SM01350 ATY49_19295 ATY49_19345 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY49_19345 SM00245 tail specific protease ATY49_19350 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY49_19370 SM00936 Penicillin-binding protein 5, C-terminal domain ATY49_19440 SM00268 Actin ATY49_19490 SM00267 diguanylate cyclase ATY49_19495 SM01263 ATY49_19495 ATY49_19510 SM00382 ATPases associated with a variety of cellular activities ATY49_19510 SM01086 C-terminal, D2-small domain, of ClpB protein ATY49_19590 SM00448 cheY-homologous receiver domain ATY49_19590 SM00850 LytTr DNA-binding domain ATY49_19615 SM00267 diguanylate cyclase ATY49_19630 SM00637 ATY49_19630 ATY49_19645 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY49_19645 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY49_19645 SM00091 PAS domain ATY49_19645 SM00267 diguanylate cyclase ATY49_19655 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY49_19725 SM00060 Fibronectin type 3 domain ATY49_19825 SM00046 Diacylglycerol kinase catalytic domain (presumed) ATY49_19840 SM00271 DnaJ molecular chaperone homology domain ATY49_19940 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY49_19975 SM01126 ATY49_19975 ATY49_20110 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ATY49_20130 SM01126 ATY49_20130 ATY49_20210 SM01126 ATY49_20210 ATY49_20220 SM01126 ATY49_20220 ATY49_20230 SM01217 ATY49_20230 ATY49_20235 SM00905 Dihydroneopterin aldolase ATY49_20260 SM00400 zinc finger ATY49_20260 SM00493 ATY49_20260 ATY49_20260 SM00766 DNA primase DnaG DnaB-binding ATY49_20350 SM01126 ATY49_20350 ATY49_20405 SM00100 Cyclic nucleotide-monophosphate binding domain ATY49_20405 SM00419 helix_turn_helix, cAMP Regulatory protein ATY49_20425 SM00903 Flavin reductase like domain ATY49_20555 SM01150 ATY49_20555 ATY49_20565 SM01126 ATY49_20565 ATY49_20570 SM01126 ATY49_20570 ATY49_20585 SM00450 Rhodanese Homology Domain ATY49_20610 SM00387 Histidine kinase-like ATPases ATY49_20610 SM00388 His Kinase A (phosphoacceptor) domain ATY49_20615 SM00382 ATPases associated with a variety of cellular activities ATY49_20615 SM00448 cheY-homologous receiver domain ATY49_20695 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY49_20700 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY49_20715 SM01126 ATY49_20715 ATY49_20780 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ATY49_20780 SM00474 3'-5' exonuclease ATY49_20780 SM00475 5'-3' exonuclease ATY49_20780 SM00482 DNA polymerase A domain ATY49_20865 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY49_20865 SM00331 Sigma factor PP2C-like phosphatases ATY49_20880 SM00867 YceI-like domain ATY49_20910 SM00944 Pro-kumamolisin, activation domain ATY49_20960 SM01126 ATY49_20960 ATY49_21005 SM00883 Chaperonin 10 Kd subunit ATY49_21050 SM00986 Uracil DNA glycosylase superfamily ATY49_21050 SM00987 UreE urease accessory protein, C-terminal domain ATY49_21055 SM00448 cheY-homologous receiver domain ATY49_21065 SM00382 ATPases associated with a variety of cellular activities ATY49_21070 SM00487 DEAD-like helicases superfamily ATY49_21070 SM00490 helicase superfamily c-terminal domain ATY49_21080 SM00357 Cold shock protein domain ATY49_21080 SM00382 ATPases associated with a variety of cellular activities ATY49_21080 SM00959 Rho termination factor, N-terminal domain ATY49_21140 SM00563 Phosphate acyltransferases ATY49_21250 SM00388 His Kinase A (phosphoacceptor) domain ATY49_21255 SM00387 Histidine kinase-like ATPases ATY49_21260 SM00448 cheY-homologous receiver domain ATY49_21260 SM00862 Transcriptional regulatory protein, C terminal ATY49_21330 SM01126 ATY49_21330 ATY49_21435 SM00878 Biotin carboxylase C-terminal domain ATY49_21505 SM00833 Cobalamin synthesis protein cobW C-terminal domain ATY49_21550 SM00836 DALR anticodon binding domain ATY49_21560 SM00382 ATPases associated with a variety of cellular activities ATY49_21640 SM00354 helix_turn _helix lactose operon repressor ATY49_21655 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ATY49_21665 SM00758 ATY49_21665 ATY49_21665 SM01217 ATY49_21665 ATY49_21695 SM00633 Glycosyl hydrolase family 10 ATY49_21700 SM00633 Glycosyl hydrolase family 10 ATY49_21745 SM01126 ATY49_21745 ATY49_21815 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY49_21850 SM00530 Helix-turn-helix XRE-family like proteins ATY49_21900 SM00530 Helix-turn-helix XRE-family like proteins ATY49_21970 SM00382 ATPases associated with a variety of cellular activities ATY49_21970 SM00448 cheY-homologous receiver domain ATY49_21975 SM00387 Histidine kinase-like ATPases ATY49_21975 SM00388 His Kinase A (phosphoacceptor) domain ATY49_21985 SM00938 Nitrogen regulatory protein P-II ATY49_21990 SM01230 ATY49_21990 ATY49_22015 SM00028 Tetratricopeptide repeats ATY49_22030 SM00563 Phosphate acyltransferases ATY49_22040 SM00155 Phospholipase D. Active site motifs. ATY49_22045 SM00867 YceI-like domain ATY49_22050 SM00855 Phosphoglycerate mutase family ATY49_22075 SM00530 Helix-turn-helix XRE-family like proteins ATY49_22105 SM00382 ATPases associated with a variety of cellular activities ATY49_22120 SM00382 ATPases associated with a variety of cellular activities ATY49_22135 SM01126 ATY49_22135 ATY49_22175 SM00829 Enoylreductase ATY49_22205 SM00487 DEAD-like helicases superfamily ATY49_22205 SM00490 helicase superfamily c-terminal domain ATY49_22205 SM00847 Helicase associated domain (HA2) Add an annotation ATY49_22215 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ATY49_22265 SM00421 helix_turn_helix, Lux Regulon ATY49_22265 SM00448 cheY-homologous receiver domain ATY49_22385 SM00155 Phospholipase D. Active site motifs. ATY49_22410 SM01126 ATY49_22410 ATY49_22455 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY49_22485 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY49_22485 SM00245 tail specific protease ATY49_22560 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY49_22680 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase ATY49_22705 SM00014 Acid phosphatase homologues ATY49_22715 SM00028 Tetratricopeptide repeats