locus-tag	class	description
CDO19_00020	COG0187	DNA topoisomerase II activity
CDO19_00030	COG0501	Belongs to the peptidase M48B family
CDO19_00070	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CDO19_00090	COG4772	TonB-dependent receptor
CDO19_00105	COG3039	Transposase
CDO19_00115	COG1755	Isoprenylcysteine carboxyl methyltransferase
CDO19_00140	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CDO19_00155	COG3039	Transposase
CDO19_00165	COG1136	(ABC) transporter
CDO19_00215	COG3039	Transposase
CDO19_00225	COG0513	Belongs to the DEAD box helicase family
CDO19_00310	COG1858	cytochrome C peroxidase
CDO19_00320	COG0702	epimerase
CDO19_00345	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CDO19_00360	COG0745	RESPONSE REGULATOR receiver
CDO19_00360	COG3706	GGDEF domain
CDO19_00370	COG2354	Protein conserved in bacteria
CDO19_00380	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
CDO19_00390	COG3293	Transposase
CDO19_00400	COG1511	domain protein
CDO19_00400	COG3264	Mechanosensitive ion channel
CDO19_00435	COG3039	Transposase
CDO19_00485	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CDO19_00560	COG3039	Transposase
CDO19_00575	COG3039	Transposase
CDO19_00615	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CDO19_00625	COG0642	Histidine kinase
CDO19_00630	COG1090	epimerase
CDO19_00640	COG3039	Transposase
CDO19_00665	COG2826	transposase and inactivated derivatives, IS30 family
CDO19_00735	COG1136	(ABC) transporter
CDO19_00780	COG1272	protein, Hemolysin III
CDO19_00785	COG1205	dead DEAH box helicase
CDO19_00785	COG1111	helicase
CDO19_00850	COG0070	glutamate synthase
CDO19_00850	COG0067	glutamate synthase
CDO19_00850	COG0069	glutamate synthase activity
CDO19_00855	COG0493	'glutamate synthase
CDO19_00905	COG1609	Transcriptional regulator
CDO19_00940	COG0366	Alpha amylase catalytic
CDO19_00945	COG0366	Alpha amylase catalytic
CDO19_00990	COG0606	chelatase, subunit chli
CDO19_01040	COG1166	arginine decarboxylase activity
CDO19_01130	COG1028	Short-chain dehydrogenase reductase Sdr
CDO19_01155	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
CDO19_01170	COG0210	DNA helicase
CDO19_01190	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
CDO19_01230	COG2937	Belongs to the GPAT DAPAT family
CDO19_01270	COG3186	Phenylalanine-4-hydroxylase
CDO19_01275	COG1522	sequence-specific DNA binding
CDO19_01285	COG2826	transposase and inactivated derivatives, IS30 family
CDO19_01320	COG1064	alcohol dehydrogenase
CDO19_01330	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
CDO19_01340	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
CDO19_01350	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
CDO19_01375	COG3039	Transposase
CDO19_01380	COG0676	glucose-6-phosphate 1-epimerase activity
CDO19_01455	COG3293	Transposase
CDO19_01470	COG2853	Lipoprotein
CDO19_01485	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CDO19_01490	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CDO19_01495	COG1127	ABC transporter
CDO19_01525	COG3293	Transposase
CDO19_01580	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CDO19_01590	COG3293	Transposase
CDO19_01600	COG3265	gluconokinase activity
CDO19_01605	COG2211	Major facilitator Superfamily
CDO19_01610	COG3459	Glycosyltransferase 36 associated
CDO19_01625	COG2205	protein histidine kinase activity
CDO19_01635	COG1414	Transcriptional regulator
CDO19_01640	COG0738	Major facilitator superfamily
CDO19_01645	COG3254	rhamnose metabolic process
CDO19_01670	COG0339	signal peptide processing
CDO19_01695	COG0564	pseudouridine synthase activity
CDO19_01755	COG3293	Transposase
CDO19_01810	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CDO19_01820	COG0842	Transport permease protein
CDO19_01825	COG1131	(ABC) transporter
CDO19_01830	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
CDO19_01850	COG1476	TRANSCRIPTIONal
CDO19_01860	COG4555	ABC transporter
CDO19_01895	COG0625	glutathione transferase activity
CDO19_01950	COG0583	DNA-binding transcription factor activity
CDO19_01985	COG1199	ATP-dependent helicase activity
CDO19_01990	COG3293	Transposase
CDO19_02015	COG1566	PFAM secretion protein HlyD family protein
CDO19_02045	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CDO19_02055	COG0745	RESPONSE REGULATOR receiver
CDO19_02060	COG2205	protein histidine kinase activity
CDO19_02085	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
CDO19_02085	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
CDO19_02145	COG3237	CsbD-like
CDO19_02150	COG0180	Tryptophanyl-tRNA synthetase
CDO19_02155	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CDO19_02205	COG0753	catalase activity
CDO19_02210	COG1595	DNA-templated transcription, initiation
CDO19_02220	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
CDO19_02230	COG0628	permease
CDO19_02250	COG1040	competence protein
CDO19_02275	COG1028	Short-chain dehydrogenase reductase Sdr
CDO19_02290	COG0463	Glycosyl transferase, family 2
CDO19_02300	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CDO19_02305	COG3100	YcgL domain-containing protein
CDO19_02320	COG3387	PFAM Glycoside hydrolase 15-related
CDO19_02325	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CDO19_02340	COG2239	Acts as a magnesium transporter
CDO19_02350	COG0045	succinate-CoA ligase (ADP-forming) activity
CDO19_02350	COG1042	CoA-binding domain protein
CDO19_02350	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CDO19_02360	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CDO19_02370	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CDO19_02405	COG3485	protocatechuate 3,4-dioxygenase
CDO19_02410	COG3485	protocatechuate 3,4-dioxygenase
CDO19_02420	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CDO19_02425	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CDO19_02430	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CDO19_02440	COG1414	Transcriptional regulator
CDO19_02455	COG4221	oxidoreductase activity
CDO19_02480	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CDO19_02505	COG0463	Glycosyl transferase, family 2
CDO19_02520	COG1475	DNA binding
CDO19_02525	COG1192	Involved in chromosome partitioning
CDO19_02540	COG0708	Exodeoxyribonuclease III
CDO19_02545	COG2211	Major facilitator Superfamily
CDO19_02560	COG0739	heme binding
CDO19_02630	COG3293	Transposase
CDO19_02655	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
CDO19_02675	COG2814	Major facilitator Superfamily
CDO19_02690	COG1289	transmembrane transporter activity
CDO19_02700	COG0577	efflux transmembrane transporter activity
CDO19_02700	COG1136	(ABC) transporter
CDO19_02705	COG0151	Belongs to the GarS family
CDO19_02715	COG0419	ATPase involved in DNA repair
CDO19_02735	COG2267	carboxylic ester hydrolase activity
CDO19_02745	COG2267	carboxylic ester hydrolase activity
CDO19_02750	COG0671	phosphoesterase, PA-phosphatase related
CDO19_02750	COG2453	phosphatase
CDO19_02765	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
CDO19_02815	COG0439	Biotin carboxylase
CDO19_02825	COG0511	ligase activity, forming carbon-carbon bonds
CDO19_02845	COG1324	tolerance protein
CDO19_02875	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CDO19_02900	COG0534	Mate efflux family protein
CDO19_02905	COG0616	signal peptide processing
CDO19_02915	COG1028	Short-chain dehydrogenase reductase Sdr
CDO19_02935	COG1754	DNA topoisomerase type I activity
CDO19_02935	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CDO19_02955	COG0758	DNA mediated transformation
CDO19_02960	COG1652	LysM domain
CDO19_02965	COG0242	peptide deformylase activity
CDO19_02975	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CDO19_02975	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CDO19_03025	COG1560	Kdo2-lipid A biosynthetic process
CDO19_03035	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CDO19_03250	COG1063	alcohol dehydrogenase
CDO19_03265	COG1294	oxidase, subunit
CDO19_03270	COG1271	oxidase subunit
CDO19_03285	COG2204	response regulator
CDO19_03320	COG2972	Histidine kinase
CDO19_03335	COG0531	amino acid
CDO19_03355	COG3590	peptidase
CDO19_03370	COG0667	Aldo Keto reductase
CDO19_03385	COG3384	dioxygenase
CDO19_03395	COG1573	uracil-dna glycosylase
CDO19_03405	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
CDO19_03420	COG0025	NhaP-type Na H and K H
CDO19_03425	COG1131	(ABC) transporter
CDO19_03430	COG0842	Transport permease protein
CDO19_03445	COG1404	Belongs to the peptidase S8 family
CDO19_03460	COG0745	RESPONSE REGULATOR receiver
CDO19_03505	COG1522	sequence-specific DNA binding
CDO19_03510	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CDO19_03535	COG2202	Pas domain
CDO19_03535	COG2205	protein histidine kinase activity
CDO19_03570	COG2813	Specifically methylates the guanine in position
CDO19_03575	COG1187	pseudouridine synthase activity
CDO19_03580	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CDO19_03615	COG0697	spore germination
CDO19_03625	COG2011	ABC-type metal ion transport system permease component
CDO19_03655	COG0508	dehydrogenase complex catalyzes the overall conversion of
CDO19_03665	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CDO19_03685	COG0356	it plays a direct role in the translocation of protons across the membrane
CDO19_03720	COG0355	proton-transporting ATP synthase activity, rotational mechanism
CDO19_03770	COG3842	ATPase activity
CDO19_03775	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CDO19_03780	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CDO19_03795	COG3293	Transposase
CDO19_03840	COG0339	signal peptide processing
CDO19_03880	COG1956	GAF domain-containing protein
CDO19_03895	COG0720	synthase
CDO19_03905	COG0513	Belongs to the DEAD box helicase family
CDO19_03950	COG0626	cystathionine gamma-synthase activity
CDO19_03990	COG3328	transposase activity
CDO19_04015	COG2086	electron transfer activity
CDO19_04040	COG0662	Cupin 2, conserved barrel domain protein
CDO19_04040	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
CDO19_04045	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CDO19_04060	COG3039	Transposase
CDO19_04090	COG3218	ABC-type transport auxiliary lipoprotein component
CDO19_04090	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CDO19_04095	COG1127	ABC transporter
CDO19_04100	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CDO19_04125	COG1183	phosphatidylcholine synthase activity
CDO19_04150	COG3039	Transposase
CDO19_04205	COG0525	valine-tRNA ligase activity
CDO19_04230	COG0795	lipopolysaccharide-transporting ATPase activity
CDO19_04245	COG4974	Belongs to the 'phage' integrase family
CDO19_04250	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CDO19_04260	COG0047	phosphoribosylformylglycinamidine synthase activity
CDO19_04260	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CDO19_04270	COG5295	Hep Hag repeat protein
CDO19_04285	COG1404	Belongs to the peptidase S8 family
CDO19_04290	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CDO19_04300	COG1459	type II secretion system
CDO19_04305	COG2165	general secretion pathway protein
CDO19_04310	COG4970	Tfp pilus assembly protein FimT
CDO19_04315	COG2165	general secretion pathway protein
CDO19_04320	COG4795	General secretion pathway protein
CDO19_04325	COG3156	type II secretion system protein K
CDO19_04330	COG3166	PFAM Fimbrial assembly family protein
CDO19_04345	COG1450	Type ii and iii secretion system protein
CDO19_04360	COG2188	Transcriptional regulator
CDO19_04405	COG3039	Transposase
CDO19_04410	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
CDO19_04415	COG1518	maintenance of DNA repeat elements
CDO19_04460	COG1399	metal-binding, possibly nucleic acid-binding protein
CDO19_04485	COG1028	Short-chain dehydrogenase reductase Sdr
CDO19_04500	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CDO19_04505	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CDO19_04535	COG3829	transcription factor binding
CDO19_04610	COG2826	transposase and inactivated derivatives, IS30 family
CDO19_04620	COG0678	peroxiredoxin activity
CDO19_04640	COG0330	HflC and HflK could
CDO19_04645	COG0330	HflC and HflK could
CDO19_04660	COG0308	aminopeptidase N
CDO19_04705	COG1560	Kdo2-lipid A biosynthetic process
CDO19_04710	COG1519	Transferase
CDO19_04715	COG1538	Outer membrane efflux protein
CDO19_04720	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CDO19_04800	COG3710	Transcriptional regulator
CDO19_04825	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
CDO19_04870	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CDO19_04880	COG3781	membrane
CDO19_04895	COG0625	glutathione transferase activity
CDO19_04905	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CDO19_04930	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
CDO19_04990	COG3039	Transposase
CDO19_05055	COG3293	Transposase
CDO19_05070	COG3039	Transposase
CDO19_05090	COG3293	Transposase
CDO19_05095	COG0584	glycerophosphoryl diester phosphodiesterase
CDO19_05120	COG0473	3-isopropylmalate dehydrogenase activity
CDO19_05175	COG0544	peptidyl-prolyl cis-trans isomerase activity
CDO19_05180	COG0740	serine-type endopeptidase activity
CDO19_05215	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CDO19_05240	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CDO19_05250	COG0631	protein serine/threonine phosphatase activity
CDO19_05275	COG3501	Rhs element vgr protein
CDO19_05335	COG0582	viral genome integration into host DNA
CDO19_05345	COG0859	PFAM glycosyl transferase family 9
CDO19_05355	COG1234	tRNA 3'-trailer cleavage
CDO19_05360	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CDO19_05375	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
CDO19_05380	COG0314	molybdopterin synthase activity
CDO19_05410	COG0537	adenosine 5'-monophosphoramidase activity
CDO19_05430	COG0714	Associated with various cellular activities
CDO19_05450	COG0242	peptide deformylase activity
CDO19_05500	COG3039	Transposase
CDO19_05525	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
CDO19_05530	COG0726	polysaccharide deacetylase
CDO19_05580	COG2211	Major facilitator Superfamily
CDO19_05590	COG1609	Transcriptional regulator
CDO19_05595	COG1028	Short-chain dehydrogenase reductase Sdr
CDO19_05600	COG2851	Citrate transporter
CDO19_05615	COG0642	Histidine kinase
CDO19_05620	COG1840	ABC-type Fe3 transport system, periplasmic component
CDO19_05625	COG2197	response regulator
CDO19_05640	COG0583	DNA-binding transcription factor activity
CDO19_05655	COG4191	Histidine kinase
CDO19_05675	COG0281	malic enzyme
CDO19_05675	COG0280	phosphate acetyltransferase
CDO19_05705	COG0352	thiamine-phosphate diphosphorylase activity
CDO19_05710	COG1773	rubredoxin
CDO19_05715	COG2912	Transglutaminase-like superfamily
CDO19_05735	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CDO19_05760	COG0006	proline dipeptidase activity
CDO19_05775	COG3293	Transposase
CDO19_05800	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CDO19_05820	COG1561	YicC-like family, N-terminal region
CDO19_05845	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CDO19_05855	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CDO19_05865	COG0254	rRNA binding
CDO19_05880	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
CDO19_05930	COG0714	Associated with various cellular activities
CDO19_05950	COG2304	oxidoreductase activity
CDO19_05970	COG1301	dicarboxylic acid transport
CDO19_05975	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CDO19_05980	COG4773	Receptor
CDO19_05985	COG0739	heme binding
CDO19_05990	COG1376	ErfK ybiS ycfS ynhG family protein
CDO19_06015	COG1022	Amp-dependent synthetase and ligase
CDO19_06025	COG1028	Short-chain dehydrogenase reductase Sdr
CDO19_06040	COG0745	RESPONSE REGULATOR receiver
CDO19_06045	COG0642	Histidine kinase
CDO19_06065	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
CDO19_06070	COG4149	molybdate abc transporter
CDO19_06075	COG0725	ABC transporter, periplasmic molybdate-binding protein
CDO19_06080	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CDO19_06080	COG3453	Protein conserved in bacteria
CDO19_06115	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CDO19_06125	COG3293	Transposase
CDO19_06140	COG2205	protein histidine kinase activity
CDO19_06145	COG0745	RESPONSE REGULATOR receiver
CDO19_06160	COG3039	Transposase
CDO19_06195	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CDO19_06200	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CDO19_06245	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
CDO19_06345	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CDO19_06365	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CDO19_06380	COG1595	DNA-templated transcription, initiation
CDO19_06430	COG2244	polysaccharide biosynthetic process
CDO19_06460	COG2264	protein methyltransferase activity
CDO19_06470	COG0438	transferase activity, transferring glycosyl groups
CDO19_06490	COG1136	(ABC) transporter
CDO19_06495	COG1132	(ABC) transporter
CDO19_06505	COG0477	Major facilitator Superfamily
CDO19_06520	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CDO19_06535	COG1253	flavin adenine dinucleotide binding
CDO19_06550	COG0306	phosphate transporter
CDO19_06555	COG1434	Gram-negative-bacterium-type cell wall biogenesis
CDO19_06625	COG2840	Smr protein MutS2
CDO19_06640	COG1238	metal cluster binding
CDO19_06655	COG1534	Rna-binding protein
CDO19_06665	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CDO19_06670	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CDO19_06680	COG1923	regulation of RNA biosynthetic process
CDO19_06685	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CDO19_06690	COG1546	Belongs to the CinA family
CDO19_06715	COG2137	regulation of response to DNA damage stimulus
CDO19_06725	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
CDO19_06745	COG0305	Participates in initiation and elongation during chromosome replication
CDO19_06750	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CDO19_06770	COG1741	Belongs to the pirin family
CDO19_06775	COG0583	DNA-binding transcription factor activity
CDO19_06805	COG0351	phosphomethylpyrimidine kinase
CDO19_06815	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
CDO19_06820	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CDO19_06835	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CDO19_06845	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
CDO19_06850	COG3734	2-keto-3-deoxy-galactonokinase
CDO19_06865	COG0800	Aldolase
CDO19_06880	COG1501	Belongs to the glycosyl hydrolase 31 family
CDO19_06890	COG1070	Carbohydrate kinase
CDO19_06900	COG0477	Major facilitator Superfamily
CDO19_06970	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CDO19_06975	COG2258	MOSC domain
CDO19_06980	COG3293	Transposase
CDO19_06990	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
CDO19_06995	COG0505	Belongs to the CarA family
CDO19_07005	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
CDO19_07010	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CDO19_07020	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CDO19_07070	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CDO19_07090	COG2205	protein histidine kinase activity
CDO19_07090	COG2198	Histidine kinase
CDO19_07090	COG0784	Response regulator, receiver
CDO19_07095	COG1024	Enoyl-CoA hydratase
CDO19_07100	COG0318	PFAM AMP-dependent synthetase and ligase
CDO19_07130	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CDO19_07160	COG0840	transmembrane signaling receptor activity
CDO19_07180	COG0835	chemotaxis
CDO19_07200	COG0840	transmembrane signaling receptor activity
CDO19_07205	COG0840	transmembrane signaling receptor activity
CDO19_07215	COG0840	transmembrane signaling receptor activity
CDO19_07225	COG0840	transmembrane signaling receptor activity
CDO19_07235	COG0840	transmembrane signaling receptor activity
CDO19_07250	COG0840	transmembrane signaling receptor activity
CDO19_07270	COG0745	RESPONSE REGULATOR receiver
CDO19_07280	COG0835	chemotaxis
CDO19_07285	COG1192	Involved in chromosome partitioning
CDO19_07290	COG1360	Flagellar Motor Protein
CDO19_07295	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CDO19_07315	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CDO19_07325	COG4771	TonB-dependent receptor
CDO19_07355	COG3039	Transposase
CDO19_07415	COG3501	Rhs element vgr protein
CDO19_07430	COG3501	Rhs element vgr protein
CDO19_07445	COG3501	Rhs element vgr protein
CDO19_07495	COG3039	Transposase
CDO19_07510	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CDO19_07510	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CDO19_07515	COG1105	Belongs to the carbohydrate kinase PfkB family
CDO19_07520	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CDO19_07520	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CDO19_07525	COG1609	Transcriptional regulator
CDO19_07545	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CDO19_07550	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CDO19_07570	COG3039	Transposase
CDO19_07580	COG0784	Response regulator, receiver
CDO19_07580	COG2205	protein histidine kinase activity
CDO19_07580	COG5002	protein histidine kinase activity
CDO19_07585	COG2733	membrane
CDO19_07595	COG1121	(ABC) transporter
CDO19_07620	COG0243	molybdopterin cofactor binding
CDO19_07630	COG0477	Major facilitator Superfamily
CDO19_07635	COG0745	RESPONSE REGULATOR receiver
CDO19_07635	COG3706	GGDEF domain
CDO19_07640	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CDO19_07645	COG0174	glutamine synthetase
CDO19_07680	COG3842	ATPase activity
CDO19_07685	COG1176	ABC-type spermidine putrescine transport system, permease component I
CDO19_07700	COG1012	belongs to the aldehyde dehydrogenase family
CDO19_07715	COG4535	Mg2 and Co2 transporter CorC
CDO19_07735	COG1702	phosphate starvation-inducible protein PhoH
CDO19_07760	COG0741	lytic transglycosylase activity
CDO19_07765	COG0723	plastoquinol--plastocyanin reductase activity
CDO19_07770	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CDO19_07775	COG2857	Cytochrome c1
CDO19_07780	COG0625	glutathione transferase activity
CDO19_07785	COG2969	positive regulation of protein catabolic process
CDO19_07825	COG3328	transposase activity
CDO19_07910	COG1262	PFAM Formylglycine-generating sulfatase enzyme
CDO19_07930	COG3293	Transposase
CDO19_07940	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CDO19_07945	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
CDO19_07945	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CDO19_07950	COG0802	atpase or kinase
CDO19_07955	COG0860	N-Acetylmuramoyl-L-alanine amidase
CDO19_07985	COG1028	Short-chain dehydrogenase reductase Sdr
CDO19_08005	COG2081	HI0933 family
CDO19_08010	COG4681	YaeQ
CDO19_08025	COG0625	glutathione transferase activity
CDO19_08045	COG0513	Belongs to the DEAD box helicase family
CDO19_08080	COG0483	inositol monophosphate 1-phosphatase activity
CDO19_08095	COG3300	MHYT domain
CDO19_08095	COG5001	Diguanylate cyclase
CDO19_08100	COG1509	lysine 2,3-aminomutase activity
CDO19_08115	COG0402	S-adenosylhomocysteine deaminase activity
CDO19_08150	COG4677	pectinesterase activity
CDO19_08160	COG3039	Transposase
CDO19_08185	COG3293	Transposase
CDO19_08200	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
CDO19_08210	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CDO19_08225	COG2166	iron-sulfur cluster assembly
CDO19_08240	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CDO19_08245	COG0137	argininosuccinate synthase activity
CDO19_08255	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CDO19_08260	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CDO19_08330	COG3039	Transposase
CDO19_08345	COG4988	ABC transporter
CDO19_08355	COG3039	Transposase
CDO19_08460	COG3039	Transposase
CDO19_08470	COG3039	Transposase
CDO19_08480	COG3209	COG3209 Rhs family protein
CDO19_08495	COG3039	Transposase
CDO19_08530	COG2198	Histidine kinase
CDO19_08530	COG0643	Histidine kinase
CDO19_08550	COG0455	bacterial-type flagellum organization
CDO19_08565	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CDO19_08580	COG5001	Diguanylate cyclase
CDO19_08580	COG3300	MHYT domain
CDO19_08585	COG3300	MHYT domain
CDO19_08585	COG5001	Diguanylate cyclase
CDO19_08590	COG1684	flagellar biosynthetic protein fliR
CDO19_08595	COG1987	bacterial-type flagellum assembly
CDO19_08610	COG3190	flagellar
CDO19_08660	COG1677	Flagellar hook-basal body complex protein FliE
CDO19_08700	COG1028	Short-chain dehydrogenase reductase Sdr
CDO19_08710	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CDO19_08725	COG2204	response regulator
CDO19_08730	COG2201	protein-glutamate methylesterase activity
CDO19_08760	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
CDO19_08765	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CDO19_08795	COG4786	Flagellar basal body rod
CDO19_08805	COG4787	bacterial-type flagellum-dependent cell motility
CDO19_08810	COG1749	Flagellar hook protein flgE
CDO19_08815	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
CDO19_08820	COG1558	bacterial-type flagellum-dependent cell motility
CDO19_08830	COG0835	chemotaxis
CDO19_08830	COG0784	Response regulator, receiver
CDO19_08850	COG5002	protein histidine kinase activity
CDO19_08860	COG4585	Histidine kinase
CDO19_08865	COG5001	Diguanylate cyclase
CDO19_08890	COG0482	sulfurtransferase activity
CDO19_08900	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
CDO19_08905	COG0542	response to heat
CDO19_08910	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CDO19_08935	COG0492	ferredoxin-NADP+ reductase activity
CDO19_08940	COG1674	ftsk spoiiie
CDO19_08965	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CDO19_08985	COG0038	chloride channel
CDO19_08990	COG0183	Belongs to the thiolase family
CDO19_08995	COG1250	3-hydroxyacyl-CoA dehydrogenase
CDO19_08995	COG1024	Enoyl-CoA hydratase
CDO19_09005	COG0105	UTP biosynthetic process
CDO19_09020	COG1426	Protein conserved in bacteria
CDO19_09030	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CDO19_09040	COG0303	'Molybdopterin
CDO19_09070	COG3039	Transposase
CDO19_09105	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CDO19_09125	COG0742	ribosomal rna small subunit methyltransferase
CDO19_09145	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CDO19_09150	COG0405	Gamma-glutamyltransferase
CDO19_09165	COG3293	Transposase
CDO19_09245	COG1862	Preprotein translocase
CDO19_09255	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CDO19_09280	COG3328	transposase activity
CDO19_09295	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CDO19_09305	COG0704	Plays a role in the regulation of phosphate uptake
CDO19_09320	COG0573	inorganic phosphate transmembrane transporter activity
CDO19_09325	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CDO19_09345	COG3293	Transposase
CDO19_09360	COG3039	Transposase
CDO19_09375	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CDO19_09385	COG1024	Enoyl-CoA hydratase
CDO19_09395	COG0494	nUDIX hydrolase
CDO19_09465	COG0667	Aldo Keto reductase
CDO19_09475	COG2925	Exonuclease
CDO19_09500	COG0288	reversible hydration of carbon dioxide
CDO19_09530	COG0316	Belongs to the HesB IscA family
CDO19_09555	COG3115	cell septum assembly
CDO19_09570	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
CDO19_09610	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
CDO19_09620	COG2986	histidine ammonia-lyase
CDO19_09670	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CDO19_09680	COG1605	Chorismate mutase
CDO19_09680	COG0077	Prephenate dehydratase
CDO19_09720	COG4566	intracellular signal transduction
CDO19_09770	COG0860	N-Acetylmuramoyl-L-alanine amidase
CDO19_09785	COG0617	tRNA 3'-terminal CCA addition
CDO19_09835	COG1472	Belongs to the glycosyl hydrolase 3 family
CDO19_09855	COG2203	Gaf domain
CDO19_09855	COG3706	GGDEF domain
CDO19_09855	COG5001	Diguanylate cyclase
CDO19_09855	COG4251	negative regulation of phosphorylation
CDO19_09940	COG0386	Belongs to the glutathione peroxidase family
CDO19_09995	COG3706	GGDEF domain
CDO19_10015	COG3293	Transposase
CDO19_10030	COG0784	Response regulator, receiver
CDO19_10030	COG2205	protein histidine kinase activity
CDO19_10030	COG5002	protein histidine kinase activity
CDO19_10055	COG3293	Transposase
CDO19_10070	COG0800	Aldolase
CDO19_10075	COG0129	dihydroxy-acid dehydratase activity
CDO19_10080	COG0363	glucosamine-6-phosphate deaminase activity
CDO19_10090	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CDO19_10105	COG0354	folic acid binding
CDO19_10120	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
CDO19_10135	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CDO19_10150	COG4591	ABC-type transport system involved in lipoprotein release permease component
CDO19_10180	COG0811	peptide transport
CDO19_10205	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CDO19_10250	COG3328	transposase activity
CDO19_10290	COG2801	Transposase and inactivated derivatives
CDO19_10320	COG3293	Transposase
CDO19_10400	COG0653	protein targeting
CDO19_10540	COG3293	Transposase
CDO19_10550	COG3039	Transposase
CDO19_10570	COG3293	Transposase
CDO19_10670	COG0124	histidyl-tRNA synthetase
CDO19_10685	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
CDO19_10730	COG1012	belongs to the aldehyde dehydrogenase family
CDO19_10755	COG0697	spore germination
CDO19_10765	COG1794	racemase activity, acting on amino acids and derivatives
CDO19_10790	COG0671	phosphoesterase, PA-phosphatase related
CDO19_10805	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
CDO19_10820	COG2183	response to ionizing radiation
CDO19_10830	COG0723	plastoquinol--plastocyanin reductase activity
CDO19_10830	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CDO19_10845	COG3243	poly(R)-hydroxyalkanoic acid synthase
CDO19_10855	COG1183	phosphatidylcholine synthase activity
CDO19_10860	COG1028	Short-chain dehydrogenase reductase Sdr
CDO19_10900	COG0668	transmembrane transport
CDO19_10910	COG0590	tRNA wobble adenosine to inosine editing
CDO19_10915	COG1321	iron dependent repressor
CDO19_10920	COG1914	H( )-stimulated, divalent metal cation uptake system
CDO19_10930	COG2201	protein-glutamate methylesterase activity
CDO19_10945	COG0583	DNA-binding transcription factor activity
CDO19_10960	COG1028	Short-chain dehydrogenase reductase Sdr
CDO19_10975	COG0583	DNA-binding transcription factor activity
CDO19_10980	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CDO19_11020	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CDO19_11030	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CDO19_11035	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
CDO19_11050	COG0539	negative regulation of cytoplasmic translation
CDO19_11060	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CDO19_11070	COG2957	Belongs to the agmatine deiminase family
CDO19_11080	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CDO19_11100	COG0395	ABC-type sugar transport system, permease component
CDO19_11105	COG1175	transmembrane transport
CDO19_11135	COG2350	Protein conserved in bacteria
CDO19_11140	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
CDO19_11145	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CDO19_11150	COG1187	pseudouridine synthase activity
CDO19_11175	COG0436	Aminotransferase
CDO19_11225	COG2801	Transposase and inactivated derivatives
CDO19_11240	COG0277	FAD linked oxidase domain protein
CDO19_11245	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CDO19_11255	COG0531	amino acid
CDO19_11260	COG0531	amino acid
CDO19_11350	COG0583	DNA-binding transcription factor activity
CDO19_11360	COG3039	Transposase
CDO19_11410	COG3039	Transposase
CDO19_11460	COG3039	Transposase
CDO19_11470	COG3039	Transposase
CDO19_11485	COG1278	Cold shock
CDO19_11495	COG3328	transposase activity
CDO19_11515	COG3039	Transposase
CDO19_11530	COG3293	Transposase
CDO19_11535	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CDO19_11555	COG0557	exoribonuclease II activity
CDO19_11585	COG1960	acyl-CoA dehydrogenase activity
CDO19_11595	COG0646	methionine synthase
CDO19_11595	COG1410	methionine synthase
CDO19_11600	COG0646	methionine synthase
CDO19_11600	COG1410	methionine synthase
CDO19_11610	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CDO19_11650	COG0386	Belongs to the glutathione peroxidase family
CDO19_11660	COG1725	Transcriptional regulator
CDO19_11665	COG1131	(ABC) transporter
CDO19_11715	COG3293	Transposase
CDO19_11755	COG2850	peptidyl-arginine hydroxylation
CDO19_11790	COG1132	(ABC) transporter
CDO19_11800	COG0583	DNA-binding transcription factor activity
CDO19_11815	COG0287	Prephenate dehydrogenase
CDO19_11815	COG1605	Chorismate mutase
CDO19_11820	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
CDO19_11850	COG0497	DNA recombination
CDO19_11860	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CDO19_11870	COG2914	Belongs to the UPF0125 (RnfH) family
CDO19_11895	COG1960	acyl-CoA dehydrogenase activity
CDO19_11950	COG2814	Major facilitator Superfamily
CDO19_11955	COG1566	PFAM secretion protein HlyD family protein
CDO19_11990	COG4774	siderophore transport
CDO19_12005	COG0367	asparagine synthase
CDO19_12020	COG1393	Belongs to the ArsC family
CDO19_12040	COG0024	Methionine aminopeptidase
CDO19_12105	COG0575	Belongs to the CDS family
CDO19_12115	COG0750	zinc metalloprotease
CDO19_12175	COG4771	TonB-dependent receptor
CDO19_12180	COG1131	(ABC) transporter
CDO19_12240	COG0529	Catalyzes the synthesis of activated sulfate
CDO19_12240	COG2895	sulfate adenylyltransferase (ATP) activity
CDO19_12245	COG2895	sulfate adenylyltransferase (ATP) activity
CDO19_12245	COG0529	Catalyzes the synthesis of activated sulfate
CDO19_12275	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
CDO19_12290	COG2040	homocysteine
CDO19_12295	COG0833	amino acid
CDO19_12325	COG2878	Part of a membrane complex involved in electron transport
CDO19_12345	COG1595	DNA-templated transcription, initiation
CDO19_12370	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CDO19_12385	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CDO19_12390	COG0251	oxidation-reduction process
CDO19_12400	COG0392	lysyltransferase activity
CDO19_12400	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CDO19_12405	COG3293	Transposase
CDO19_12470	COG1902	pentaerythritol trinitrate reductase activity
CDO19_12485	COG2824	Alkylphosphonate utilization operon protein PhnA
CDO19_12500	COG1047	Peptidyl-prolyl cis-trans
CDO19_12535	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CDO19_12555	COG1451	nucleotide metabolic process
CDO19_12575	COG0183	Belongs to the thiolase family
CDO19_12590	COG0745	RESPONSE REGULATOR receiver
CDO19_12590	COG3706	GGDEF domain
CDO19_12605	COG1793	dna ligase
CDO19_12605	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
CDO19_12615	COG1793	dna ligase
CDO19_12620	COG1201	RNA secondary structure unwinding
CDO19_12640	COG1278	Cold shock
CDO19_12645	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
CDO19_12660	COG3046	protein related to deoxyribodipyrimidine photolyase
CDO19_12665	COG3380	Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P) . May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers
CDO19_12670	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CDO19_12735	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CDO19_12750	COG1024	Enoyl-CoA hydratase
CDO19_12750	COG1250	3-hydroxyacyl-CoA dehydrogenase
CDO19_12775	COG1960	acyl-CoA dehydrogenase activity
CDO19_12795	COG3867	Arabinogalactan endo-beta-1,4-galactanase
CDO19_12805	COG3293	Transposase
CDO19_12855	COG2353	YceI-like domain
CDO19_12865	COG2353	YceI-like domain
CDO19_12880	COG1760	l-serine dehydratase
CDO19_12890	COG0626	cystathionine gamma-synthase activity
CDO19_12895	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CDO19_12900	COG0739	heme binding
CDO19_12910	COG1272	protein, Hemolysin III
CDO19_12930	COG0517	IMP dehydrogenase activity
CDO19_12930	COG0516	GMP reductase activity
CDO19_12935	COG0463	Glycosyl transferase, family 2
CDO19_12945	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
CDO19_12955	COG4771	TonB-dependent receptor
CDO19_12960	COG1309	transcriptional regulator
CDO19_12970	COG1960	acyl-CoA dehydrogenase activity
CDO19_13020	COG0330	HflC and HflK could
CDO19_13035	COG3956	TIGRFAM MazG family protein
CDO19_13045	COG0494	nUDIX hydrolase
CDO19_13055	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CDO19_13060	COG0837	glucose binding
CDO19_13075	COG3858	chitin binding
CDO19_13075	COG1388	LysM domain
CDO19_13095	COG1472	Belongs to the glycosyl hydrolase 3 family
CDO19_13165	COG3537	Alpha-1,2-mannosidase
CDO19_13225	COG3142	Participates in the control of copper homeostasis
CDO19_13230	COG1446	asparaginase
CDO19_13280	COG0840	transmembrane signaling receptor activity
CDO19_13285	COG0835	chemotaxis
CDO19_13300	COG0189	ligase activity
CDO19_13310	COG1397	ADP-ribosylglycohydrolase
CDO19_13320	COG1199	ATP-dependent helicase activity
CDO19_13330	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CDO19_13345	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CDO19_13385	COG3293	Transposase
CDO19_13400	COG0837	glucose binding
CDO19_13405	COG0837	glucose binding
CDO19_13415	COG1643	Atp-dependent helicase
CDO19_13420	COG0783	Belongs to the Dps family
CDO19_13430	COG0514	ATP-dependent DNA helicase (RecQ)
CDO19_13470	COG3293	Transposase
CDO19_13515	COG1187	pseudouridine synthase activity
CDO19_13525	COG0602	queuosine metabolic process
CDO19_13535	COG2885	chlorophyll binding
CDO19_13550	COG0848	biopolymer transport protein
CDO19_13560	COG0824	Thioesterase
CDO19_13700	COG3209	COG3209 Rhs family protein
CDO19_13725	COG3209	COG3209 Rhs family protein
CDO19_13735	COG3501	Rhs element vgr protein
CDO19_13745	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
CDO19_13750	COG1845	cytochrome c oxidase, subunit III
CDO19_13755	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CDO19_13785	COG0196	riboflavin kinase activity
CDO19_13790	COG0728	peptidoglycan biosynthetic process
CDO19_13795	COG0268	Binds directly to 16S ribosomal RNA
CDO19_13815	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CDO19_13820	COG0824	Thioesterase
CDO19_13835	COG1946	Acyl-CoA thioesterase
CDO19_13905	COG1877	trehalose-phosphatase activity
CDO19_13910	COG3387	PFAM Glycoside hydrolase 15-related
CDO19_13935	COG0564	pseudouridine synthase activity
CDO19_13940	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CDO19_13945	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
CDO19_13945	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CDO19_13960	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CDO19_13985	COG2184	nucleotidyltransferase activity
CDO19_14005	COG2194	sulfuric ester hydrolase activity
CDO19_14010	COG4969	Belongs to the N-Me-Phe pilin family
CDO19_14020	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
CDO19_14055	COG3039	Transposase
CDO19_14070	COG3039	Transposase
CDO19_14090	COG3293	Transposase
CDO19_14100	COG1132	(ABC) transporter
CDO19_14130	COG0745	RESPONSE REGULATOR receiver
CDO19_14135	COG5002	protein histidine kinase activity
CDO19_14135	COG5000	phosphorelay sensor kinase activity
CDO19_14140	COG0475	glutathione-regulated potassium exporter activity
CDO19_14175	COG1187	pseudouridine synthase activity
CDO19_14180	COG5001	Diguanylate cyclase
CDO19_14180	COG5002	protein histidine kinase activity
CDO19_14250	COG3039	Transposase
CDO19_14300	COG1028	Short-chain dehydrogenase reductase Sdr
CDO19_14320	COG0415	Belongs to the DNA photolyase family
CDO19_14325	COG0305	Participates in initiation and elongation during chromosome replication
CDO19_14335	COG0367	asparagine synthase
CDO19_14350	COG1960	acyl-CoA dehydrogenase activity
CDO19_14365	COG0084	hydrolase, TatD family'
CDO19_14370	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CDO19_14425	COG0735	belongs to the Fur family
CDO19_14465	COG3039	Transposase
CDO19_14470	COG3039	Transposase
CDO19_14490	COG3039	Transposase
CDO19_14510	COG2205	protein histidine kinase activity
CDO19_14525	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
CDO19_14535	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CDO19_14545	COG0643	Histidine kinase
CDO19_14545	COG2198	Histidine kinase
CDO19_14550	COG0840	transmembrane signaling receptor activity
CDO19_14555	COG0835	chemotaxis
CDO19_14560	COG2202	Pas domain
CDO19_14560	COG2199	diguanylate cyclase activity
CDO19_14560	COG2200	EAL domain
CDO19_14565	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CDO19_14575	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CDO19_14580	COG3590	peptidase
CDO19_14600	COG1515	deoxyribonuclease V activity
CDO19_14605	COG1741	Belongs to the pirin family
CDO19_14650	COG3501	Rhs element vgr protein
CDO19_14680	COG3501	Rhs element vgr protein
CDO19_14700	COG3501	Rhs element vgr protein
CDO19_14710	COG1741	Belongs to the pirin family
CDO19_14715	COG1966	Carbon starvation protein
CDO19_14720	COG2879	small protein
CDO19_14755	COG4251	negative regulation of phosphorylation
CDO19_14755	COG3706	GGDEF domain
CDO19_14755	COG2203	Gaf domain
CDO19_14755	COG5001	Diguanylate cyclase
CDO19_14765	COG0629	single-stranded DNA binding
CDO19_14770	COG0142	geranyltranstransferase activity
CDO19_14800	COG0527	aspartate kinase activity
CDO19_14810	COG0384	phenazine biosynthesis protein PhzF
CDO19_14820	COG1764	response to oxidative stress
CDO19_14850	COG0519	Catalyzes the synthesis of GMP from XMP
CDO19_14880	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CDO19_14920	COG0693	protein deglycase activity
CDO19_14940	COG1959	2 iron, 2 sulfur cluster binding
CDO19_14945	COG0719	Fe-S assembly protein
CDO19_14950	COG0396	ATPase activity
CDO19_14955	COG0719	Fe-S assembly protein
CDO19_14960	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CDO19_14980	COG3039	Transposase
CDO19_15010	COG3039	Transposase
CDO19_15025	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
CDO19_15035	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
CDO19_15040	COG0174	glutamine synthetase
CDO19_15045	COG3328	transposase activity
CDO19_15070	COG0326	Molecular chaperone. Has ATPase activity
CDO19_15075	COG2207	Transcriptional regulator
CDO19_15095	COG0657	acetylesterase activity
CDO19_15095	COG2755	lipolytic protein G-D-S-L family
CDO19_15120	COG0488	(ABC) transporter
CDO19_15155	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CDO19_15155	COG4651	solute:proton antiporter activity
CDO19_15170	COG4772	TonB-dependent receptor
CDO19_15180	COG4264	IucA IucC family
CDO19_15195	COG0019	diaminopimelate decarboxylase activity
CDO19_15255	COG4206	TonB-dependent receptor
CDO19_15280	COG0542	response to heat
CDO19_15315	COG0534	Mate efflux family protein
CDO19_15365	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CDO19_15375	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CDO19_15420	COG1555	photosystem II stabilization
CDO19_15425	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CDO19_15440	COG3178	'Phosphotransferase
CDO19_15445	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CDO19_15455	COG0628	permease
CDO19_15480	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CDO19_15505	COG0271	Belongs to the BolA IbaG family
CDO19_15515	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
CDO19_15525	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
CDO19_15530	COG1137	ATPase activity
CDO19_15545	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CDO19_15565	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CDO19_15570	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CDO19_15580	COG2239	Acts as a magnesium transporter
CDO19_15590	COG1294	oxidase, subunit
CDO19_15595	COG1271	oxidase subunit
CDO19_15605	COG1113	amino acid transport
CDO19_15620	COG2197	response regulator
CDO19_15625	COG0531	amino acid
CDO19_15680	COG0789	Transcriptional regulator
CDO19_15705	COG0754	glutathionylspermidine amidase activity
CDO19_15730	COG1842	Phage shock protein A
CDO19_15750	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
CDO19_15760	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
CDO19_15855	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CDO19_15860	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CDO19_15915	COG1858	cytochrome C peroxidase
CDO19_15950	COG0515	serine threonine protein kinase
CDO19_15955	COG0631	protein serine/threonine phosphatase activity
CDO19_15990	COG3501	Rhs element vgr protein
CDO19_16065	COG3039	Transposase
CDO19_16080	COG3039	Transposase
CDO19_16115	COG2801	Transposase and inactivated derivatives
CDO19_16125	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
CDO19_16125	COG0316	Belongs to the HesB IscA family
CDO19_16130	COG2154	pterin-4-alpha-carbinolamine dehydratase
CDO19_16140	COG0428	transporter
CDO19_16145	COG0428	transporter
CDO19_16150	COG3064	Membrane
CDO19_16160	COG1530	ribonuclease E activity
CDO19_16175	COG3293	Transposase
CDO19_16190	COG3039	Transposase
CDO19_16210	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
CDO19_16245	COG3039	Transposase
CDO19_16250	COG3039	Transposase
CDO19_16280	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CDO19_16280	COG1648	precorrin-2 dehydrogenase activity
CDO19_16305	COG0746	molybdenum cofactor guanylyltransferase activity
CDO19_16375	COG4206	TonB-dependent receptor
CDO19_16410	COG4206	TonB-dependent receptor
CDO19_16460	COG0531	amino acid
CDO19_16475	COG0006	proline dipeptidase activity
CDO19_16485	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CDO19_16500	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CDO19_16505	COG3938	Belongs to the proline racemase family
CDO19_16540	COG4191	Histidine kinase
CDO19_16540	COG0784	Response regulator, receiver
CDO19_16635	COG3040	lipid binding
CDO19_16690	COG0438	transferase activity, transferring glycosyl groups
CDO19_16695	COG0438	transferase activity, transferring glycosyl groups
CDO19_16740	COG0776	regulation of translation
CDO19_16755	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CDO19_16760	COG0291	Belongs to the bacterial ribosomal protein bL35 family
CDO19_16765	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CDO19_16805	COG4969	Belongs to the N-Me-Phe pilin family
CDO19_16845	COG1611	Belongs to the LOG family
CDO19_16860	COG2095	MarC family integral membrane protein
CDO19_16870	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
CDO19_16875	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CDO19_16910	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CDO19_16930	COG0195	Participates in both transcription termination and antitermination
CDO19_16945	COG1007	ATP synthesis coupled electron transport
CDO19_16960	COG0713	ATP synthesis coupled electron transport
CDO19_16975	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
CDO19_16980	COG1034	ATP synthesis coupled electron transport
CDO19_16985	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
CDO19_16990	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
CDO19_17010	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CDO19_17030	COG1028	Short-chain dehydrogenase reductase Sdr
CDO19_17050	COG3293	Transposase
CDO19_17130	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CDO19_17135	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CDO19_17145	COG2890	protein-(glutamine-N5) methyltransferase activity
CDO19_17175	COG0433	COG0433 Predicted ATPase
CDO19_17180	COG2826	transposase and inactivated derivatives, IS30 family
CDO19_17195	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CDO19_17205	COG0412	Dienelactone hydrolase
CDO19_17235	COG0489	protein tyrosine kinase activity
CDO19_17280	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CDO19_17285	COG2311	Membrane
CDO19_17290	COG1047	Peptidyl-prolyl cis-trans
CDO19_17295	COG0791	NLP P60 protein
CDO19_17300	COG0791	NLP P60 protein
CDO19_17320	COG1785	Belongs to the alkaline phosphatase family
CDO19_17325	COG0037	tRNA processing
CDO19_17335	COG0142	geranyltranstransferase activity
CDO19_17355	COG0312	modulator of DNA gyrase
CDO19_17360	COG3028	Belongs to the UPF0307 family
CDO19_17365	COG0312	modulator of DNA gyrase
CDO19_17375	COG3164	Protein of unknown function
CDO19_17380	COG1530	ribonuclease E activity
CDO19_17390	COG2968	Membrane
CDO19_17440	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CDO19_17470	COG3118	belongs to the thioredoxin family
CDO19_17485	COG3293	Transposase
CDO19_17550	COG3293	Transposase
CDO19_17565	COG3039	Transposase
CDO19_17570	COG3039	Transposase
CDO19_17590	COG3293	Transposase
CDO19_17665	COG3273	potassium ion transport
CDO19_17665	COG0471	metal ion transport
CDO19_17695	COG1970	mechanosensitive ion channel activity
CDO19_17710	COG3293	Transposase
CDO19_17725	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CDO19_17760	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CDO19_17770	COG2895	sulfate adenylyltransferase (ATP) activity
CDO19_17770	COG0529	Catalyzes the synthesis of activated sulfate
CDO19_17780	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
CDO19_17810	COG0784	Response regulator, receiver
CDO19_17810	COG2205	protein histidine kinase activity
CDO19_17810	COG2198	Histidine kinase
CDO19_17865	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
CDO19_17870	COG3588	fructose-bisphosphate aldolase
CDO19_17875	COG0469	pyruvate kinase activity
CDO19_17915	COG0753	catalase activity
CDO19_17940	COG3039	Transposase
CDO19_17960	COG1917	Cupin 2, conserved barrel domain protein
CDO19_17960	COG2207	Transcriptional regulator
CDO19_17990	COG0823	Involved in the tonB-independent uptake of proteins
CDO19_17990	COG1506	peptidase
CDO19_18015	COG3039	Transposase
CDO19_18020	COG1297	OPT oligopeptide transporter protein
CDO19_18090	COG0328	RNA-DNA hybrid ribonuclease activity
CDO19_18090	COG0406	alpha-ribazole phosphatase activity
CDO19_18125	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
CDO19_18140	COG1708	protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity
CDO19_18145	COG1708	protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity
CDO19_18150	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
CDO19_18170	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
CDO19_18240	COG3501	Rhs element vgr protein
CDO19_18305	COG3501	Rhs element vgr protein
CDO19_18310	COG3501	Rhs element vgr protein
CDO19_18315	COG3179	chitinase
CDO19_18320	COG3501	Rhs element vgr protein
CDO19_18330	COG3501	Rhs element vgr protein
CDO19_18395	COG3501	Rhs element vgr protein
CDO19_18425	COG1262	PFAM Formylglycine-generating sulfatase enzyme
CDO19_18475	COG3501	Rhs element vgr protein
CDO19_18480	COG1262	PFAM Formylglycine-generating sulfatase enzyme
CDO19_18490	COG1262	PFAM Formylglycine-generating sulfatase enzyme
CDO19_18550	COG2963	transposase activity
CDO19_18580	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
CDO19_18595	COG2197	response regulator
CDO19_18600	COG4585	Histidine kinase
CDO19_18620	COG2894	cell division
CDO19_18625	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
CDO19_18635	COG0642	Histidine kinase
CDO19_18640	COG0745	RESPONSE REGULATOR receiver
CDO19_18645	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CDO19_18655	COG2194	sulfuric ester hydrolase activity
CDO19_18685	COG3551	Protein conserved in bacteria
CDO19_18735	COG3293	Transposase
CDO19_18750	COG0203	ribosomal protein L17
CDO19_18755	COG0202	RNA polymerase activity
CDO19_18770	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CDO19_18775	COG0201	protein transport
CDO19_18785	COG1841	ribosomal large subunit assembly
CDO19_18790	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CDO19_18810	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CDO19_18830	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CDO19_18835	COG0255	Belongs to the universal ribosomal protein uL29 family
CDO19_18840	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CDO19_18865	COG0089	rRNA binding
CDO19_18910	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CDO19_18925	COG0222	ribosome binding
CDO19_18930	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CDO19_18950	COG0250	Participates in transcription elongation, termination and antitermination
CDO19_18955	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CDO19_18985	COG0012	GTP binding
CDO19_19000	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CDO19_19040	COG0521	Mo-molybdopterin cofactor biosynthetic process
CDO19_19060	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CDO19_19095	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CDO19_19105	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CDO19_19135	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
CDO19_19140	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
CDO19_19160	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
CDO19_19175	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CDO19_19175	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CDO19_19220	COG2890	protein-(glutamine-N5) methyltransferase activity
CDO19_19230	COG3634	alkyl hydroperoxide reductase activity
CDO19_19235	COG0583	DNA-binding transcription factor activity
CDO19_19245	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CDO19_19315	COG4783	chaperone-mediated protein folding
CDO19_19330	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
CDO19_19345	COG0671	phosphoesterase, PA-phosphatase related
CDO19_19370	COG2833	Protein of unknown function (DUF455)
CDO19_19390	COG0285	dihydrofolate synthase activity
CDO19_19400	COG0406	alpha-ribazole phosphatase activity
CDO19_19435	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
CDO19_19440	COG4208	sulfate ABC transporter
CDO19_19445	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
CDO19_19450	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
CDO19_19455	COG0156	8-amino-7-oxononanoate synthase activity
CDO19_19490	COG0446	pyridine nucleotide-disulphide oxidoreductase
CDO19_19490	COG1902	pentaerythritol trinitrate reductase activity
CDO19_19535	COG3706	GGDEF domain
CDO19_19535	COG0745	RESPONSE REGULATOR receiver
CDO19_19575	COG3293	Transposase
CDO19_19625	COG3386	PFAM SMP-30 Gluconolaconase
CDO19_19645	COG1024	Enoyl-CoA hydratase
CDO19_19655	COG0318	PFAM AMP-dependent synthetase and ligase
CDO19_19660	COG0583	DNA-binding transcription factor activity
CDO19_19700	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CDO19_19705	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CDO19_19715	COG2096	Adenosyltransferase
CDO19_19720	COG0123	including yeast histone deacetylase and acetoin utilization protein
CDO19_19735	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
CDO19_19795	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CDO19_19810	COG0642	Histidine kinase
CDO19_19825	COG4181	ATPase activity
CDO19_19835	COG2175	clavaminate synthase activity
CDO19_19885	COG0667	Aldo Keto reductase
CDO19_19895	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CDO19_19900	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CDO19_19920	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CDO19_19935	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CDO19_19945	COG3293	Transposase
CDO19_19995	COG2226	methyltransferase
CDO19_20055	COG0604	alcohol dehydrogenase
CDO19_20055	COG1028	Short-chain dehydrogenase reductase Sdr
CDO19_20055	COG3321	synthase
CDO19_20070	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
CDO19_20085	COG0494	nUDIX hydrolase
CDO19_20100	COG1388	LysM domain
CDO19_20100	COG4942	peptidase
CDO19_20125	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
CDO19_20130	COG1181	Belongs to the D-alanine--D-alanine ligase family
CDO19_20150	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CDO19_20155	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CDO19_20170	COG3116	cell division
CDO19_20215	COG1988	membrane-bound metal-dependent
CDO19_20220	COG0277	FAD linked oxidase domain protein
CDO19_20225	COG0745	RESPONSE REGULATOR receiver
CDO19_20230	COG2205	protein histidine kinase activity
CDO19_20240	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
CDO19_20245	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
CDO19_20275	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
CDO19_20305	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CDO19_20305	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CDO19_20345	COG0488	(ABC) transporter
CDO19_20390	COG0745	RESPONSE REGULATOR receiver
CDO19_20395	COG2205	protein histidine kinase activity
CDO19_20480	COG3039	Transposase
CDO19_20485	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CDO19_20490	COG3293	Transposase
CDO19_20500	COG3039	Transposase
CDO19_20550	COG3039	Transposase
CDO19_20560	COG3293	Transposase
CDO19_20595	COG0726	polysaccharide deacetylase
CDO19_20595	COG1649	PFAM Uncharacterised BCR, COG1649
CDO19_20600	COG1215	transferase activity, transferring glycosyl groups
CDO19_20610	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CDO19_20615	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CDO19_20620	COG1609	Transcriptional regulator
CDO19_20645	COG3250	beta-galactosidase activity
CDO19_20665	COG2963	transposase activity
CDO19_20700	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CDO19_20705	COG4191	Histidine kinase
CDO19_20710	COG0784	Response regulator, receiver
CDO19_20715	COG4251	negative regulation of phosphorylation
CDO19_20720	COG2823	Periplasmic or secreted lipoprotein
CDO19_20725	COG0673	inositol 2-dehydrogenase activity
CDO19_20730	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
CDO19_20765	COG1051	belongs to the nudix hydrolase family
CDO19_20765	COG1056	cytidyltransferase-related domain
CDO19_20810	COG1686	Belongs to the peptidase S11 family
CDO19_20820	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CDO19_20825	COG2951	lytic endotransglycosylase activity
CDO19_20840	COG1388	LysM domain
CDO19_20840	COG3409	Peptidoglycan-binding domain 1 protein
CDO19_20840	COG5632	N-Acetylmuramoyl-L-alanine amidase
CDO19_20855	COG3501	Rhs element vgr protein
CDO19_20880	COG0772	Belongs to the SEDS family
CDO19_20895	COG1792	Involved in formation and maintenance of cell shape
CDO19_20900	COG1077	Cell shape determining protein MreB Mrl
CDO19_20910	COG3039	Transposase
CDO19_20960	COG2199	diguanylate cyclase activity
CDO19_20965	COG0308	aminopeptidase N
CDO19_20995	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
CDO19_21040	COG1505	serine-type exopeptidase activity
CDO19_21075	COG3275	phosphorelay sensor kinase activity
CDO19_21100	COG3293	Transposase
CDO19_21125	COG0659	secondary active sulfate transmembrane transporter activity
CDO19_21130	COG5297	Belongs to the glycosyl hydrolase family 6
CDO19_21130	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
CDO19_21170	COG3293	Transposase
CDO19_21215	COG0598	Magnesium transport protein CorA
CDO19_21225	COG1113	amino acid transport
CDO19_21235	COG5297	Belongs to the glycosyl hydrolase family 6
CDO19_21240	COG4305	rare lipoprotein A
CDO19_21245	COG0697	spore germination
CDO19_21305	COG4221	oxidoreductase activity
CDO19_21335	COG0456	acetyltransferase
CDO19_21345	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
CDO19_21375	COG3227	Zinc metalloprotease (Elastase)
CDO19_21390	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CDO19_21390	COG2111	Na H antiporter
CDO19_21395	COG1006	Multisubunit Na H antiporter MnhC subunit
CDO19_21400	COG0651	ATP synthesis coupled electron transport
CDO19_21410	COG2212	antiporter activity
CDO19_21415	COG1320	monovalent cation:proton antiporter activity
CDO19_21425	COG3039	Transposase
CDO19_21450	COG3104	oligopeptide transport
CDO19_21465	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CDO19_21495	COG0183	Belongs to the thiolase family
CDO19_21545	COG3039	Transposase
CDO19_21575	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
CDO19_21580	COG3023	N-Acetylmuramoyl-L-alanine amidase
CDO19_21590	COG4948	Mandelate Racemase Muconate Lactonizing
CDO19_21625	COG3293	Transposase
CDO19_21635	COG0531	amino acid
CDO19_21650	COG3293	Transposase
CDO19_21670	COG4682	membrane
CDO19_21675	COG3039	Transposase
CDO19_21680	COG2133	pyrroloquinoline quinone binding
CDO19_21720	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CDO19_21730	COG0828	Belongs to the bacterial ribosomal protein bS21 family
CDO19_21735	COG1610	YqeY-like protein
CDO19_21745	COG1295	ribonuclease BN
CDO19_21750	COG0358	DNA primase activity
CDO19_21810	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
CDO19_21825	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CDO19_21990	COG3039	Transposase
CDO19_22005	COG3328	transposase activity
CDO19_22025	COG1473	amidohydrolase
CDO19_22030	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CDO19_22050	COG5383	Protein conserved in bacteria
CDO19_22090	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CDO19_22110	COG0028	Belongs to the TPP enzyme family
CDO19_22115	COG4191	Histidine kinase
CDO19_22140	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CDO19_22155	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CDO19_22160	COG3177	Filamentation induced by cAMP protein fic
CDO19_22175	COG0596	Alpha beta hydrolase
CDO19_22185	COG0318	PFAM AMP-dependent synthetase and ligase
CDO19_22190	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CDO19_22245	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CDO19_22350	COG3039	Transposase
CDO19_22405	COG2353	YceI-like domain
CDO19_22435	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
CDO19_22450	COG3386	PFAM SMP-30 Gluconolaconase
CDO19_22490	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CDO19_22505	COG4771	TonB-dependent receptor
CDO19_22520	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CDO19_22540	COG1252	NADH dehydrogenase
CDO19_22550	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CDO19_22560	COG3437	response regulator, receiver
CDO19_22565	COG2177	Part of the ABC transporter FtsEX involved in
CDO19_22570	COG2884	Cell division ATP-binding protein ftsE
CDO19_22580	COG3118	belongs to the thioredoxin family
CDO19_22585	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CDO19_22595	COG0729	surface antigen
CDO19_22600	COG2911	Protein conserved in bacteria
CDO19_22635	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CDO19_22650	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CDO19_22710	COG1733	regulation of RNA biosynthetic process
CDO19_22715	COG0702	epimerase
CDO19_22750	COG0583	DNA-binding transcription factor activity
CDO19_22755	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CDO19_22770	COG2205	protein histidine kinase activity
CDO19_22775	COG2205	protein histidine kinase activity
CDO19_22780	COG0745	RESPONSE REGULATOR receiver
CDO19_22810	COG1902	pentaerythritol trinitrate reductase activity
CDO19_22815	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CDO19_22825	COG2814	Major facilitator Superfamily
CDO19_22830	COG0583	DNA-binding transcription factor activity
CDO19_22850	COG0084	hydrolase, TatD family'
CDO19_22885	COG3293	Transposase
CDO19_22905	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CDO19_22975	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CDO19_22980	COG1960	acyl-CoA dehydrogenase activity
CDO19_23035	COG0523	cobalamin synthesis protein
CDO19_23055	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
CDO19_23075	COG0457	Tetratricopeptide repeat
CDO19_23090	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CDO19_23115	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CDO19_23115	COG0519	Catalyzes the synthesis of GMP from XMP
CDO19_23125	COG0805	protein transport
CDO19_23135	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CDO19_23145	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
CDO19_23200	COG3661	Belongs to the glycosyl hydrolase 67 family
CDO19_23210	COG4948	Mandelate Racemase Muconate Lactonizing
CDO19_23220	COG1472	Belongs to the glycosyl hydrolase 3 family
CDO19_23225	COG0246	Mannitol dehydrogenase
CDO19_23250	COG3693	PFAM glycoside hydrolase, family 10
CDO19_23275	COG2211	Major facilitator Superfamily
CDO19_23315	COG3293	Transposase
CDO19_23325	COG4943	cyclic-guanylate-specific phosphodiesterase activity
CDO19_23370	COG1846	Transcriptional regulator
CDO19_23375	COG1764	response to oxidative stress
CDO19_23475	COG3549	Plasmid maintenance system killer
CDO19_23490	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
CDO19_23495	COG1196	nuclear chromosome segregation
CDO19_23535	COG2032	superoxide dismutase activity
CDO19_23540	COG2032	superoxide dismutase activity
CDO19_23545	COG2204	response regulator
CDO19_23550	COG3852	Histidine kinase
CDO19_23555	COG0004	ammonium transporteR
CDO19_23560	COG0347	Belongs to the P(II) protein family
CDO19_23565	COG0174	glutamine synthetase
CDO19_23615	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CDO19_23625	COG2062	phosphohistidine phosphatase, SixA
CDO19_23630	COG0489	protein tyrosine kinase activity
CDO19_23650	COG1396	sequence-specific DNA binding
CDO19_23655	COG3550	peptidyl-serine autophosphorylation
CDO19_23660	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
CDO19_23665	COG1262	PFAM Formylglycine-generating sulfatase enzyme
CDO19_23680	COG1125	glycine betaine transport
CDO19_23680	COG0517	IMP dehydrogenase activity
CDO19_23695	COG1119	ATPase activity
CDO19_23705	COG1752	Esterase of the alpha-beta hydrolase superfamily
CDO19_23720	COG3039	Transposase
CDO19_23740	COG0656	L-ascorbic acid biosynthetic process
CDO19_23745	COG2130	NADP-dependent
CDO19_23750	COG0667	Aldo Keto reductase
CDO19_23760	COG1187	pseudouridine synthase activity
CDO19_23775	COG1643	Atp-dependent helicase
CDO19_23780	COG4807	Protein conserved in bacteria
CDO19_23785	COG4948	Mandelate Racemase Muconate Lactonizing
CDO19_23795	COG0179	Fumarylacetoacetate (FAA) hydrolase
CDO19_23800	COG1028	Short-chain dehydrogenase reductase Sdr
CDO19_23820	COG3507	Belongs to the glycosyl hydrolase 43 family
CDO19_23865	COG3162	membrane
CDO19_23870	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CDO19_23885	COG0708	Exodeoxyribonuclease III
CDO19_23900	COG2091	lysine biosynthetic process via aminoadipic acid
CDO19_23910	COG3540	Alkaline phosphatase
CDO19_23930	COG0227	Belongs to the bacterial ribosomal protein bL28 family
CDO19_23935	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CDO19_23940	COG2159	amidohydrolase
CDO19_23950	COG2159	amidohydrolase
CDO19_23965	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CDO19_23970	COG0583	DNA-binding transcription factor activity
CDO19_23975	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CDO19_23990	COG0210	DNA helicase
CDO19_24005	COG0531	amino acid
CDO19_24015	COG1322	Protein conserved in bacteria
CDO19_24025	COG0386	Belongs to the glutathione peroxidase family
CDO19_24075	COG0793	Belongs to the peptidase S41A family
CDO19_24080	COG4942	peptidase
CDO19_24090	COG2234	aminopeptidase activity
CDO19_24135	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CDO19_24140	COG0302	gtp cyclohydrolase
CDO19_24165	COG0477	Major facilitator Superfamily
CDO19_24255	COG1929	Belongs to the glycerate kinase type-1 family
CDO19_24260	COG2271	Major facilitator Superfamily
CDO19_24275	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CDO19_24285	COG0861	Integral membrane protein TerC family
CDO19_24295	COG0584	glycerophosphoryl diester phosphodiesterase
CDO19_24305	COG0671	phosphoesterase, PA-phosphatase related
CDO19_24315	COG0726	polysaccharide deacetylase
CDO19_24330	COG0230	Belongs to the bacterial ribosomal protein bL34 family