ATY42_00005 PF00308 Bacterial dnaA protein ATY42_00005 PF08299 Bacterial dnaA protein helix-turn-helix ATY42_00005 PF11638 DnaA N-terminal domain ATY42_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ATY42_00010 PF02767 DNA polymerase III beta subunit, central domain ATY42_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ATY42_00015 PF02463 RecF/RecN/SMC N terminal domain ATY42_00020 PF00204 DNA gyrase B ATY42_00020 PF00986 DNA gyrase B subunit, carboxyl terminus ATY42_00020 PF01751 Toprim domain ATY42_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_00025 PF02517 CAAX protease self-immunity ATY42_00030 PF01435 Peptidase family M48 ATY42_00035 PF09295 ChAPs (Chs5p-Arf1p-binding proteins) ATY42_00035 PF13181 Tetratricopeptide repeat ATY42_00040 PF03544 Gram-negative bacterial TonB protein C-terminal ATY42_00045 PF01618 ATY42_00045 ATY42_00050 PF02472 Biopolymer transport protein ExbD/TolR ATY42_00055 PF02472 Biopolymer transport protein ExbD/TolR ATY42_00060 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ATY42_00070 PF13091 PLD-like domain ATY42_00080 PF00316 Fructose-1-6-bisphosphatase ATY42_00085 PF00155 Aminotransferase class I and II ATY42_00090 PF00593 TonB dependent receptor ATY42_00090 PF07715 TonB-dependent Receptor Plug Domain ATY42_00100 PF01609 Transposase DDE domain ATY42_00100 PF05598 ATY42_00100 ATY42_00105 PF01070 FMN-dependent dehydrogenase ATY42_00110 PF04191 Phospholipid methyltransferase ATY42_00125 PF07055 Enoyl reductase FAD binding domain ATY42_00125 PF12241 Trans-2-enoyl-CoA reductase catalytic region ATY42_00125 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ATY42_00130 PF00294 pfkB family carbohydrate kinase ATY42_00145 PF01609 Transposase DDE domain ATY42_00145 PF05598 ATY42_00145 ATY42_00150 PF13546 ATY42_00150 ATY42_00160 PF00005 ABC transporter ATY42_00170 PF01609 Transposase DDE domain ATY42_00170 PF05598 ATY42_00170 ATY42_00180 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ATY42_00185 PF12760 Transposase zinc-ribbon domain ATY42_00185 PF12762 ATY42_00185 ATY42_00190 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ATY42_00200 PF01609 Transposase DDE domain ATY42_00200 PF05598 ATY42_00200 ATY42_00210 PF00270 DEAD/DEAH box helicase ATY42_00210 PF00271 Helicase conserved C-terminal domain ATY42_00220 PF06903 ATY42_00220 ATY42_00225 PF00890 FAD binding domain ATY42_00225 PF13454 FAD-NAD(P)-binding ATY42_00245 PF01609 Transposase DDE domain ATY42_00245 PF05598 ATY42_00245 ATY42_00250 PF01609 Transposase DDE domain ATY42_00260 PF13340 ATY42_00260 ATY42_00265 PF01609 Transposase DDE domain ATY42_00275 PF05593 ATY42_00275 ATY42_00280 PF12760 Transposase zinc-ribbon domain ATY42_00280 PF12762 ATY42_00280 ATY42_00295 PF03150 Di-haem cytochrome c peroxidase ATY42_00300 PF13460 NADH(P)-binding ATY42_00305 PF00128 Alpha amylase, catalytic domain ATY42_00305 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ATY42_00310 PF11154 ATY42_00310 ATY42_00315 PF00128 Alpha amylase, catalytic domain ATY42_00320 PF02446 4-alpha-glucanotransferase ATY42_00325 PF00128 Alpha amylase, catalytic domain ATY42_00325 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ATY42_00325 PF11941 Domain of unknown function (DUF3459) ATY42_00330 PF00128 Alpha amylase, catalytic domain ATY42_00330 PF02806 Alpha amylase, C-terminal all-beta domain ATY42_00330 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ATY42_00335 PF00534 Glycosyl transferases group 1 ATY42_00335 PF08323 Starch synthase catalytic domain ATY42_00340 PF00990 GGDEF domain ATY42_00345 PF02638 ATY42_00345 ATY42_00350 PF05661 ATY42_00350 ATY42_00355 PF03109 ATY42_00355 ATY42_00360 PF13586 ATY42_00360 ATY42_00365 PF13340 ATY42_00365 ATY42_00375 PF00924 Mechanosensitive ion channel ATY42_00375 PF12607 ATY42_00375 ATY42_00380 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ATY42_00390 PF13358 DDE superfamily endonuclease ATY42_00390 PF13592 ATY42_00390 ATY42_00400 PF01464 Transglycosylase SLT domain ATY42_00410 PF00263 ATY42_00410 ATY42_00410 PF03958 Bacterial type II/III secretion system short domain ATY42_00415 PF01311 ATY42_00415 ATY42_00420 PF09486 ATY42_00420 ATY42_00425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATY42_00425 PF02874 ATP synthase alpha/beta family, beta-barrel domain ATY42_00430 PF02108 ATY42_00430 ATY42_00435 PF09502 ATY42_00435 ATY42_00440 PF01514 Secretory protein of YscJ/FliF family ATY42_00445 PF09487 ATY42_00445 ATY42_00450 PF09613 ATY42_00450 ATY42_00455 PF01312 FlhB HrpN YscU SpaS Family ATY42_00460 PF00771 FHIPEP family ATY42_00465 PF09483 ATY42_00465 ATY42_00470 PF01052 Surface presentation of antigens (SPOA) ATY42_00475 PF00813 ATY42_00475 ATY42_00480 PF01313 ATY42_00480 ATY42_00505 PF05932 Tir chaperone protein (CesT) family ATY42_00525 PF05819 ATY42_00525 ATY42_00530 PF13855 Leucine rich repeat ATY42_00550 PF13180 PDZ domain ATY42_00550 PF13365 Trypsin-like peptidase domain ATY42_00565 PF01370 NAD dependent epimerase/dehydratase family ATY42_00565 PF08338 Domain of unknown function (DUF1731) ATY42_00575 PF01609 Transposase DDE domain ATY42_00575 PF05598 ATY42_00575 ATY42_00595 PF13358 DDE superfamily endonuclease ATY42_00595 PF13551 Winged helix-turn helix ATY42_00595 PF13592 ATY42_00595 ATY42_00600 PF00665 Integrase core domain ATY42_00615 PF00293 NUDIX domain ATY42_00625 PF10116 ATY42_00625 ATY42_00635 PF13936 Helix-turn-helix domain ATY42_00640 PF16576 ATY42_00640 ATY42_00645 PF01609 Transposase DDE domain ATY42_00645 PF05598 ATY42_00645 ATY42_00650 PF00005 ABC transporter ATY42_00655 PF02687 ATY42_00655 ATY42_00655 PF12704 MacB-like periplasmic core domain ATY42_00660 PF02687 ATY42_00660 ATY42_00660 PF12704 MacB-like periplasmic core domain ATY42_00665 PF00665 Integrase core domain ATY42_00670 PF12760 Transposase zinc-ribbon domain ATY42_00670 PF12762 ATY42_00670 ATY42_00675 PF08845 ATY42_00675 ATY42_00680 PF05016 Plasmid stabilisation system protein ATY42_00685 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system ATY42_00690 PF03006 ATY42_00690 ATY42_00695 PF00270 DEAD/DEAH box helicase ATY42_00695 PF00271 Helicase conserved C-terminal domain ATY42_00695 PF09369 ATY42_00695 ATY42_00700 PF13482 RNase_H superfamily ATY42_00705 PF03009 Glycerophosphoryl diester phosphodiesterase family ATY42_00710 PF00480 ROK family ATY42_00715 PF00593 TonB dependent receptor ATY42_00715 PF07715 TonB-dependent Receptor Plug Domain ATY42_00720 PF08975 Domain of unknown function (DUF1868) ATY42_00725 PF03435 Saccharopine dehydrogenase ATY42_00740 PF01028 Eukaryotic DNA topoisomerase I, catalytic core ATY42_00745 PF11720 Peptidase inhibitor I78 family ATY42_00750 PF00310 Glutamine amidotransferases class-II ATY42_00750 PF01493 GXGXG motif ATY42_00750 PF01645 Conserved region in glutamate synthase ATY42_00750 PF04898 Glutamate synthase central domain ATY42_00755 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY42_00755 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ATY42_00765 PF13936 Helix-turn-helix domain ATY42_00770 PF12760 Transposase zinc-ribbon domain ATY42_00770 PF12762 ATY42_00770 ATY42_00775 PF00665 Integrase core domain ATY42_00785 PF01609 Transposase DDE domain ATY42_00790 PF01609 Transposase DDE domain ATY42_00790 PF05598 ATY42_00790 ATY42_00795 PF04962 KduI/IolB family ATY42_00805 PF00356 Bacterial regulatory proteins, lacI family ATY42_00805 PF13377 Periplasmic binding protein-like domain ATY42_00820 PF12850 Calcineurin-like phosphoesterase superfamily domain ATY42_00825 PF00128 Alpha amylase, catalytic domain ATY42_00825 PF02806 Alpha amylase, C-terminal all-beta domain ATY42_00825 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ATY42_00830 PF00128 Alpha amylase, catalytic domain ATY42_00830 PF16657 ATY42_00830 ATY42_00835 PF00128 Alpha amylase, catalytic domain ATY42_00835 PF11896 Domain of unknown function (DUF3416) ATY42_00840 PF13276 ATY42_00840 ATY42_00840 PF13683 ATY42_00840 ATY42_00845 PF00872 ATY42_00845 ATY42_00855 PF00872 ATY42_00855 ATY42_00870 PF05598 ATY42_00870 ATY42_00875 PF01609 Transposase DDE domain ATY42_00880 PF13546 ATY42_00880 ATY42_00885 PF01078 Magnesium chelatase, subunit ChlI ATY42_00885 PF13335 ATY42_00885 ATY42_00885 PF13541 Subunit ChlI of Mg-chelatase ATY42_00890 PF04380 ATY42_00890 ATY42_00895 PF00543 Nitrogen regulatory protein P-II ATY42_00900 PF02838 Glycosyl hydrolase family 20, domain 2 ATY42_00900 PF07555 beta-N-acetylglucosaminidase ATY42_00905 PF13505 Outer membrane protein beta-barrel domain ATY42_00910 PF09851 ATY42_00910 ATY42_00910 PF14470 Bacterial PH domain ATY42_00915 PF01564 Spermine/spermidine synthase ATY42_00915 PF17284 ATY42_00915 ATY42_00920 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ATY42_00925 PF01609 Transposase DDE domain ATY42_00925 PF05598 ATY42_00925 ATY42_00930 PF05954 Phage late control gene D protein (GPD) ATY42_00930 PF10106 ATY42_00930 ATY42_00930 PF13296 ATY42_00930 ATY42_00935 PF11678 ATY42_00935 ATY42_00940 PF11394 ATY42_00940 ATY42_00945 PF05488 PAAR motif ATY42_00950 PF11678 ATY42_00950 ATY42_00955 PF11394 ATY42_00955 ATY42_00960 PF01134 Glucose inhibited division protein A ATY42_00960 PF13932 GidA associated domain 3 ATY42_00970 PF00291 Pyridoxal-phosphate dependent enzyme ATY42_00975 PF02698 DUF218 domain ATY42_00980 PF12680 SnoaL-like domain ATY42_00985 PF05118 Aspartyl/Asparaginyl beta-hydroxylase ATY42_00990 PF08241 Methyltransferase domain ATY42_00995 PF13561 Enoyl-(Acyl carrier protein) reductase ATY42_01000 PF12697 Alpha/beta hydrolase family ATY42_01010 PF13683 ATY42_01010 ATY42_01015 PF14315 ATY42_01015 ATY42_01020 PF04349 Periplasmic glucan biosynthesis protein, MdoG ATY42_01025 PF00512 His Kinase A (phospho-acceptor) domain ATY42_01025 PF01590 GAF domain ATY42_01030 PF00265 Thymidine kinase ATY42_01035 PF00580 UvrD/REP helicase N-terminal domain ATY42_01035 PF13361 UvrD-like helicase C-terminal domain ATY42_01045 PF04337 Protein of unknown function, DUF480 ATY42_01050 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) ATY42_01055 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ATY42_01060 PF04820 Tryptophan halogenase ATY42_01065 PF00593 TonB dependent receptor ATY42_01070 PF00593 TonB dependent receptor ATY42_01070 PF13620 Carboxypeptidase regulatory-like domain ATY42_01075 PF00356 Bacterial regulatory proteins, lacI family ATY42_01075 PF13377 Periplasmic binding protein-like domain ATY42_01085 PF01553 Acyltransferase ATY42_01095 PF04325 Protein of unknown function (DUF465) ATY42_01105 PF01527 Transposase ATY42_01115 PF02502 Ribose/Galactose Isomerase ATY42_01115 PF12408 Ribose-5-phosphate isomerase ATY42_01120 PF13472 GDSL-like Lipase/Acylhydrolase family ATY42_01125 PF14300 Domain of unknown function (DUF4375) ATY42_01130 PF00351 Biopterin-dependent aromatic amino acid hydroxylase ATY42_01135 PF01037 AsnC family ATY42_01135 PF13412 Winged helix-turn-helix DNA-binding ATY42_01145 PF07715 TonB-dependent Receptor Plug Domain ATY42_01150 PF00593 TonB dependent receptor ATY42_01160 PF05598 ATY42_01160 ATY42_01170 PF08212 Lipocalin-like domain ATY42_01180 PF13546 ATY42_01180 ATY42_01185 PF01609 Transposase DDE domain ATY42_01190 PF00107 Zinc-binding dehydrogenase ATY42_01190 PF08240 Alcohol dehydrogenase GroES-like domain ATY42_01195 PF00150 Cellulase (glycosyl hydrolase family 5) ATY42_01200 PF00150 Cellulase (glycosyl hydrolase family 5) ATY42_01205 PF00150 Cellulase (glycosyl hydrolase family 5) ATY42_01210 PF13936 Helix-turn-helix domain ATY42_01230 PF01609 Transposase DDE domain ATY42_01230 PF05598 ATY42_01230 ATY42_01235 PF01263 Aldose 1-epimerase ATY42_01235 PF01471 Putative peptidoglycan binding domain ATY42_01235 PF13406 Transglycosylase SLT domain ATY42_01240 PF07690 Major Facilitator Superfamily ATY42_01245 PF01126 Heme oxygenase ATY42_01250 PF00360 Phytochrome region ATY42_01250 PF01590 GAF domain ATY42_01250 PF08446 PAS fold ATY42_01250 PF08448 PAS fold ATY42_01255 PF03594 ATY42_01255 ATY42_01260 PF03594 ATY42_01260 ATY42_01295 PF01527 Transposase ATY42_01300 PF12760 Transposase zinc-ribbon domain ATY42_01305 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ATY42_01305 PF06827 Zinc finger found in FPG and IleRS ATY42_01305 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ATY42_01310 PF12760 Transposase zinc-ribbon domain ATY42_01310 PF12762 ATY42_01310 ATY42_01315 PF13340 ATY42_01315 ATY42_01320 PF13586 ATY42_01320 ATY42_01325 PF05598 ATY42_01325 ATY42_01330 PF01609 Transposase DDE domain ATY42_01335 PF04333 ATY42_01335 ATY42_01340 PF13466 STAS domain ATY42_01345 PF05494 Toluene tolerance, Ttg2 ATY42_01350 PF02470 ATY42_01350 ATY42_01355 PF02405 ATY42_01355 ATY42_01360 PF00005 ABC transporter ATY42_01370 PF13508 Acetyltransferase (GNAT) domain ATY42_01375 PF12760 Transposase zinc-ribbon domain ATY42_01375 PF12762 ATY42_01375 ATY42_01385 PF00665 Integrase core domain ATY42_01385 PF13936 Helix-turn-helix domain ATY42_01390 PF13340 ATY42_01390 ATY42_01395 PF13586 ATY42_01395 ATY42_01400 PF01609 Transposase DDE domain ATY42_01405 PF01609 Transposase DDE domain ATY42_01410 PF01609 Transposase DDE domain ATY42_01415 PF01610 ATY42_01415 ATY42_01415 PF13542 ATY42_01415 ATY42_01420 PF00665 Integrase core domain ATY42_01420 PF13276 ATY42_01420 ATY42_01425 PF00285 Citrate synthase ATY42_01425 PF01527 Transposase ATY42_01445 PF13360 PQQ-like domain ATY42_01450 PF13340 ATY42_01450 ATY42_01455 PF13586 ATY42_01455 ATY42_01460 PF13671 AAA domain ATY42_01465 PF13347 MFS/sugar transport protein ATY42_01470 PF06165 Glycosyltransferase family 36 ATY42_01470 PF17167 ATY42_01470 ATY42_01475 PF15979 ATY42_01475 ATY42_01485 PF00072 Response regulator receiver domain ATY42_01485 PF00512 His Kinase A (phospho-acceptor) domain ATY42_01485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_01485 PF12860 ATY42_01485 ATY42_01490 PF02659 ATY42_01490 ATY42_01495 PF01614 Bacterial transcriptional regulator ATY42_01495 PF09339 IclR helix-turn-helix domain ATY42_01500 PF07690 Major Facilitator Superfamily ATY42_01505 PF05336 Domain of unknown function (DUF718) ATY42_01510 PF05598 ATY42_01510 ATY42_01515 PF12760 Transposase zinc-ribbon domain ATY42_01515 PF12762 ATY42_01515 ATY42_01530 PF01432 Peptidase family M3 ATY42_01540 PF01553 Acyltransferase ATY42_01545 PF00472 RF-1 domain ATY42_01550 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) ATY42_01555 PF00849 RNA pseudouridylate synthase ATY42_01560 PF07883 Cupin domain ATY42_01565 PF03109 ATY42_01565 ATY42_01570 PF02036 SCP-2 sterol transfer family ATY42_01585 PF01609 Transposase DDE domain ATY42_01600 PF01609 Transposase DDE domain ATY42_01605 PF13586 ATY42_01605 ATY42_01610 PF13340 ATY42_01610 ATY42_01615 PF01527 Transposase ATY42_01630 PF13546 ATY42_01630 ATY42_01635 PF12760 Transposase zinc-ribbon domain ATY42_01635 PF12762 ATY42_01635 ATY42_01645 PF01609 Transposase DDE domain ATY42_01645 PF05598 ATY42_01645 ATY42_01660 PF02558 Ketopantoate reductase PanE/ApbA ATY42_01660 PF08546 Ketopantoate reductase PanE/ApbA C terminal ATY42_01665 PF12686 ATY42_01665 ATY42_01670 PF01061 ATY42_01670 ATY42_01675 PF00005 ABC transporter ATY42_01680 PF00175 Oxidoreductase NAD-binding domain ATY42_01680 PF00970 Oxidoreductase FAD-binding domain ATY42_01685 PF01545 Cation efflux family ATY42_01690 PF02583 Metal-sensitive transcriptional repressor ATY42_01700 PF01381 Helix-turn-helix ATY42_01705 PF08386 TAP-like protein ATY42_01710 PF00005 ABC transporter ATY42_01715 PF12679 ATY42_01715 ATY42_01720 PF03544 Gram-negative bacterial TonB protein C-terminal ATY42_01725 PF04820 Tryptophan halogenase ATY42_01730 PF13621 Cupin-like domain ATY42_01735 PF07277 ATY42_01735 ATY42_01740 PF00593 TonB dependent receptor ATY42_01740 PF07715 TonB-dependent Receptor Plug Domain ATY42_01745 PF00043 Glutathione S-transferase, C-terminal domain ATY42_01745 PF02798 Glutathione S-transferase, N-terminal domain ATY42_01750 PF00326 Prolyl oligopeptidase family ATY42_01750 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ATY42_01755 PF05960 Bacterial protein of unknown function (DUF885) ATY42_01770 PF00490 Delta-aminolevulinic acid dehydratase ATY42_01780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY42_01780 PF03466 LysR substrate binding domain ATY42_01785 PF01223 DNA/RNA non-specific endonuclease ATY42_01790 PF00175 Oxidoreductase NAD-binding domain ATY42_01790 PF00258 Flavodoxin ATY42_01790 PF03929 ATY42_01790 ATY42_01795 PF07676 WD40-like Beta Propeller Repeat ATY42_01800 PF01488 Shikimate / quinate 5-dehydrogenase ATY42_01800 PF08501 Shikimate dehydrogenase substrate binding domain ATY42_01810 PF13307 Helicase C-terminal domain ATY42_01820 PF12760 Transposase zinc-ribbon domain ATY42_01820 PF12762 ATY42_01820 ATY42_01830 PF13437 HlyD family secretion protein ATY42_01835 PF00199 Catalase ATY42_01835 PF06628 Catalase-related immune-responsive ATY42_01840 PF12796 Ankyrin repeats (3 copies) ATY42_01855 PF01207 Dihydrouridine synthase (Dus) ATY42_01865 PF00072 Response regulator receiver domain ATY42_01865 PF00486 Transcriptional regulatory protein, C terminal ATY42_01870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_01875 PF08811 ATY42_01875 ATY42_01880 PF07394 ATY42_01880 ATY42_01895 PF02237 Biotin protein ligase C terminal domain ATY42_01895 PF03099 Biotin/lipoate A/B protein ligase family ATY42_01895 PF08279 HTH domain ATY42_01900 PF03309 Type III pantothenate kinase ATY42_01905 PF05036 Sporulation related domain ATY42_01915 PF02223 Thymidylate kinase ATY42_01935 PF00491 Arginase family ATY42_01940 PF08085 ATY42_01940 ATY42_01945 PF08085 ATY42_01945 ATY42_01950 PF05532 CsbD-like ATY42_01955 PF00579 tRNA synthetases class I (W and Y) ATY42_01955 PF07411 Domain of unknown function (DUF1508) ATY42_01960 PF00753 Metallo-beta-lactamase superfamily ATY42_01965 PF02225 PA domain ATY42_01965 PF04389 Peptidase family M28 ATY42_01975 PF00892 EamA-like transporter family ATY42_01980 PF00892 EamA-like transporter family ATY42_01985 PF00892 EamA-like transporter family ATY42_01990 PF12697 Alpha/beta hydrolase family ATY42_02000 PF01292 Prokaryotic cytochrome b561 ATY42_02005 PF00199 Catalase ATY42_02010 PF04542 Sigma-70 region 2 ATY42_02010 PF08281 Sigma-70, region 4 ATY42_02020 PF00883 Cytosol aminopeptidase family, catalytic domain ATY42_02025 PF13419 Haloacid dehalogenase-like hydrolase ATY42_02030 PF01594 ATY42_02030 ATY42_02040 PF01040 UbiA prenyltransferase family ATY42_02045 PF00156 Phosphoribosyl transferase domain ATY42_02050 PF04055 Radical SAM superfamily ATY42_02050 PF06968 Biotin and Thiamin Synthesis associated domain ATY42_02055 PF00155 Aminotransferase class I and II ATY42_02060 PF13358 DDE superfamily endonuclease ATY42_02060 PF13551 Winged helix-turn helix ATY42_02060 PF13592 ATY42_02060 ATY42_02065 PF13561 Enoyl-(Acyl carrier protein) reductase ATY42_02075 PF01494 FAD binding domain ATY42_02080 PF00535 Glycosyl transferase family 2 ATY42_02085 PF13723 ATY42_02085 ATY42_02090 PF00109 Beta-ketoacyl synthase, N-terminal domain ATY42_02090 PF02801 Beta-ketoacyl synthase, C-terminal domain ATY42_02095 PF05166 YcgL domain ATY42_02100 PF00023 Ankyrin repeat ATY42_02100 PF12796 Ankyrin repeats (3 copies) ATY42_02110 PF00723 Glycosyl hydrolases family 15 ATY42_02115 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ATY42_02115 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ATY42_02120 PF13546 ATY42_02120 ATY42_02125 PF00999 Sodium/hydrogen exchanger family ATY42_02125 PF02254 TrkA-N domain ATY42_02130 PF00571 CBS domain ATY42_02130 PF01769 Divalent cation transporter ATY42_02130 PF03448 MgtE intracellular N domain ATY42_02140 PF13302 Acetyltransferase (GNAT) domain ATY42_02140 PF13380 CoA binding domain ATY42_02140 PF13549 ATP-grasp domain ATY42_02140 PF13607 Succinyl-CoA ligase like flavodoxin domain ATY42_02145 PF04332 ATY42_02145 ATY42_02150 PF00317 Ribonucleotide reductase, all-alpha domain ATY42_02150 PF02867 Ribonucleotide reductase, barrel domain ATY42_02155 PF00268 Ribonucleotide reductase, small chain ATY42_02160 PF06114 Domain of unknown function (DUF955) ATY42_02170 PF00085 Thioredoxin ATY42_02175 PF01527 Transposase ATY42_02190 PF00108 Thiolase, N-terminal domain ATY42_02190 PF02803 Thiolase, C-terminal domain ATY42_02195 PF00775 Dioxygenase ATY42_02195 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal ATY42_02200 PF00775 Dioxygenase ATY42_02205 PF00206 Lyase ATY42_02205 PF10397 Adenylosuccinate lyase C-terminus ATY42_02210 PF00561 alpha/beta hydrolase fold ATY42_02215 PF02627 Carboxymuconolactone decarboxylase family ATY42_02220 PF12146 Putative lysophospholipase ATY42_02225 PF01614 Bacterial transcriptional regulator ATY42_02225 PF09339 IclR helix-turn-helix domain ATY42_02230 PF01163 RIO1 family ATY42_02235 PF13936 Helix-turn-helix domain ATY42_02240 PF00106 short chain dehydrogenase ATY42_02250 PF05036 Sporulation related domain ATY42_02255 PF00750 tRNA synthetases class I (R) ATY42_02255 PF03485 Arginyl tRNA synthetase N terminal domain ATY42_02255 PF05746 DALR anticodon binding domain ATY42_02260 PF04002 RadC-like JAB domain ATY42_02265 PF02441 Flavoprotein ATY42_02265 PF04127 DNA / pantothenate metabolism flavoprotein ATY42_02270 PF00692 dUTPase ATY42_02275 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ATY42_02275 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ATY42_02275 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ATY42_02275 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ATY42_02285 PF07578 Lipid A Biosynthesis N-terminal domain ATY42_02290 PF00535 Glycosyl transferase family 2 ATY42_02295 PF01370 NAD dependent epimerase/dehydratase family ATY42_02300 PF11731 ATY42_02300 ATY42_02305 PF02195 ParB-like nuclease domain ATY42_02310 PF13614 AAA domain ATY42_02320 PF00156 Phosphoribosyl transferase domain ATY42_02325 PF03372 Endonuclease/Exonuclease/phosphatase family ATY42_02330 PF07690 Major Facilitator Superfamily ATY42_02340 PF03702 Uncharacterised protein family (UPF0075) ATY42_02345 PF01551 Peptidase family M23 ATY42_02345 PF04225 Opacity-associated protein A LysM-like domain ATY42_02350 PF00579 tRNA synthetases class I (W and Y) ATY42_02385 PF01527 Transposase ATY42_02390 PF00072 Response regulator receiver domain ATY42_02390 PF00512 His Kinase A (phospho-acceptor) domain ATY42_02390 PF01627 Hpt domain ATY42_02390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_02395 PF00072 Response regulator receiver domain ATY42_02395 PF00563 EAL domain ATY42_02395 PF00990 GGDEF domain ATY42_02400 PF13548 ATY42_02400 ATY42_02410 PF04519 ATY42_02410 ATY42_02415 PF04519 ATY42_02415 ATY42_02420 PF13340 ATY42_02420 ATY42_02425 PF13586 ATY42_02425 ATY42_02430 PF01521 Iron-sulphur cluster biosynthesis ATY42_02435 PF03583 Secretory lipase ATY42_02440 PF00293 NUDIX domain ATY42_02440 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain ATY42_02440 PF09297 NADH pyrophosphatase zinc ribbon domain ATY42_02445 PF03186 ATY42_02445 ATY42_02455 PF04505 ATY42_02455 ATY42_02465 PF01553 Acyltransferase ATY42_02465 PF07690 Major Facilitator Superfamily ATY42_02480 PF12805 ATY42_02480 ATY42_02480 PF13515 ATY42_02480 ATY42_02485 PF14103 ATY42_02485 ATY42_02490 PF13304 AAA domain ATY42_02495 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATY42_02495 PF02843 Phosphoribosylglycinamide synthetase, C domain ATY42_02495 PF02844 Phosphoribosylglycinamide synthetase, N domain ATY42_02500 PF14103 ATY42_02500 ATY42_02505 PF01808 AICARFT/IMPCHase bienzyme ATY42_02505 PF02142 MGS-like domain ATY42_02515 PF12146 Putative lysophospholipase ATY42_02525 PF12147 ATY42_02525 ATY42_02535 PF12760 Transposase zinc-ribbon domain ATY42_02535 PF12762 ATY42_02535 ATY42_02540 PF02954 Bacterial regulatory protein, Fis family ATY42_02545 PF11906 ATY42_02545 ATY42_02550 PF01381 Helix-turn-helix ATY42_02560 PF06325 Ribosomal protein L11 methyltransferase (PrmA) ATY42_02575 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain ATY42_02575 PF02785 Biotin carboxylase C-terminal domain ATY42_02575 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ATY42_02580 PF05635 23S rRNA-intervening sequence protein ATY42_02585 PF00364 Biotin-requiring enzyme ATY42_02590 PF01220 Dehydroquinase class II ATY42_02600 PF02683 ATY42_02600 ATY42_02600 PF11412 Disulphide bond corrector protein DsbC ATY42_02600 PF13899 Thioredoxin-like ATY42_02605 PF03091 CutA1 divalent ion tolerance protein ATY42_02610 PF12760 Transposase zinc-ribbon domain ATY42_02610 PF12762 ATY42_02610 ATY42_02615 PF13546 ATY42_02615 ATY42_02620 PF01548 ATY42_02620 ATY42_02625 PF00270 DEAD/DEAH box helicase ATY42_02625 PF00271 Helicase conserved C-terminal domain ATY42_02635 PF11304 ATY42_02635 ATY42_02650 PF01554 MatE ATY42_02655 PF01343 Peptidase family S49 ATY42_02665 PF13561 Enoyl-(Acyl carrier protein) reductase ATY42_02680 PF01300 Telomere recombination ATY42_02685 PF01131 DNA topoisomerase ATY42_02685 PF01751 Toprim domain ATY42_02685 PF13368 ATY42_02685 ATY42_02690 PF06271 ATY42_02690 ATY42_02690 PF14237 ATY42_02690 ATY42_02695 PF00114 Pilin (bacterial filament) ATY42_02695 PF14237 ATY42_02695 ATY42_02700 PF04361 ATY42_02700 ATY42_02705 PF02481 DNA recombination-mediator protein A ATY42_02710 PF01476 LysM domain ATY42_02715 PF01327 Polypeptide deformylase ATY42_02720 PF00551 Formyl transferase ATY42_02720 PF02911 Formyl transferase, C-terminal domain ATY42_02725 PF01029 NusB family ATY42_02725 PF01189 NOL1/NOP2/sun family ATY42_02730 PF13231 ATY42_02730 ATY42_02735 PF04932 ATY42_02735 ATY42_02740 PF00535 Glycosyl transferase family 2 ATY42_02745 PF02350 UDP-N-acetylglucosamine 2-epimerase ATY42_02750 PF03703 ATY42_02750 ATY42_02755 PF03703 ATY42_02755 ATY42_02760 PF00925 GTP cyclohydrolase II ATY42_02765 PF13420 Acetyltransferase (GNAT) domain ATY42_02770 PF03279 ATY42_02770 ATY42_02775 PF02580 D-Tyr-tRNA(Tyr) deacylase ATY42_02780 PF00140 Sigma-70 factor, region 1 ATY42_02780 PF03979 Sigma-70 factor, region 1 ATY42_02780 PF04539 Sigma-70 region 3 ATY42_02780 PF04542 Sigma-70 region 2 ATY42_02780 PF04545 Sigma-70, region 4 ATY42_02780 PF04546 Sigma-70, non-essential region ATY42_02800 PF00589 Phage integrase family ATY42_02810 PF13730 ATY42_02810 ATY42_02820 PF07996 Type IV secretion system proteins ATY42_02835 PF04610 ATY42_02835 ATY42_02850 PF00145 C-5 cytosine-specific DNA methylase ATY42_02895 PF01610 ATY42_02895 ATY42_02895 PF13542 ATY42_02895 ATY42_02910 PF12760 Transposase zinc-ribbon domain ATY42_02910 PF12762 ATY42_02910 ATY42_02915 PF13936 Helix-turn-helix domain ATY42_02920 PF13683 ATY42_02920 ATY42_02925 PF00005 ABC transporter ATY42_02930 PF12040 ATY42_02930 ATY42_02930 PF12679 ATY42_02930 ATY42_02935 PF12040 ATY42_02935 ATY42_02940 PF00593 TonB dependent receptor ATY42_02940 PF07715 TonB-dependent Receptor Plug Domain ATY42_02945 PF11445 ATY42_02945 ATY42_02950 PF00691 OmpA family ATY42_02955 PF05650 ATY42_02955 ATY42_02960 PF11828 ATY42_02960 ATY42_02975 PF03692 ATY42_02975 ATY42_02985 PF01609 Transposase DDE domain ATY42_02990 PF02322 ATY42_02990 ATY42_02995 PF01654 ATY42_02995 ATY42_03000 PF00072 Response regulator receiver domain ATY42_03000 PF00158 Sigma-54 interaction domain ATY42_03000 PF02954 Bacterial regulatory protein, Fis family ATY42_03015 PF01339 CheB methylesterase ATY42_03015 PF01739 CheR methyltransferase, SAM binding domain ATY42_03015 PF03705 CheR methyltransferase, all-alpha domain ATY42_03025 PF01266 FAD dependent oxidoreductase ATY42_03035 PF06580 ATY42_03035 ATY42_03040 PF00072 Response regulator receiver domain ATY42_03045 PF04397 LytTr DNA-binding domain ATY42_03055 PF13520 Amino acid permease ATY42_03065 PF09995 ATY42_03065 ATY42_03070 PF01431 Peptidase family M13 ATY42_03070 PF05649 Peptidase family M13 ATY42_03075 PF00535 Glycosyl transferase family 2 ATY42_03085 PF00248 Aldo/keto reductase family ATY42_03090 PF03358 NADPH-dependent FMN reductase ATY42_03095 PF07681 ATY42_03095 ATY42_03100 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ATY42_03110 PF03167 Uracil DNA glycosylase superfamily ATY42_03110 PF13566 ATY42_03110 ATY42_03115 PF02469 Fasciclin domain ATY42_03130 PF00999 Sodium/hydrogen exchanger family ATY42_03135 PF00005 ABC transporter ATY42_03140 PF01061 ATY42_03140 ATY42_03150 PF11730 ATY42_03150 ATY42_03160 PF00082 Subtilase family ATY42_03160 PF04151 Bacterial pre-peptidase C-terminal domain ATY42_03165 PF03895 YadA-like C-terminal region ATY42_03165 PF05658 Head domain of trimeric autotransporter adhesin ATY42_03165 PF05662 Coiled stalk of trimeric autotransporter adhesin ATY42_03170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_03175 PF00072 Response regulator receiver domain ATY42_03175 PF00486 Transcriptional regulatory protein, C terminal ATY42_03180 PF13223 ATY42_03180 ATY42_03190 PF00691 OmpA family ATY42_03190 PF13677 ATY42_03190 ATY42_03195 PF01618 ATY42_03195 ATY42_03200 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme ATY42_03205 PF01641 SelR domain ATY42_03215 PF01037 AsnC family ATY42_03215 PF13404 AsnC-type helix-turn-helix domain ATY42_03220 PF01266 FAD dependent oxidoreductase ATY42_03225 PF00842 Alanine racemase, C-terminal domain ATY42_03225 PF01168 Alanine racemase, N-terminal domain ATY42_03230 PF11454 ATY42_03230 ATY42_03245 PF00072 Response regulator receiver domain ATY42_03245 PF00512 His Kinase A (phospho-acceptor) domain ATY42_03245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_03245 PF08448 PAS fold ATY42_03245 PF13188 PAS domain ATY42_03250 PF11607 Protein of unknown function (DUF3247) ATY42_03255 PF07995 Glucose / Sorbosone dehydrogenase ATY42_03270 PF05175 Methyltransferase small domain ATY42_03275 PF00849 RNA pseudouridylate synthase ATY42_03280 PF13419 Haloacid dehalogenase-like hydrolase ATY42_03285 PF13561 Enoyl-(Acyl carrier protein) reductase ATY42_03290 PF07209 ATY42_03290 ATY42_03310 PF04461 Protein of unknown function (DUF520) ATY42_03315 PF00892 EamA-like transporter family ATY42_03320 PF00005 ABC transporter ATY42_03320 PF09383 NIL domain ATY42_03325 PF00528 Binding-protein-dependent transport system inner membrane component ATY42_03330 PF03180 NLPA lipoprotein ATY42_03335 PF07301 ATY42_03335 ATY42_03340 PF03922 OmpW family ATY42_03345 PF03167 Uracil DNA glycosylase superfamily ATY42_03350 PF11101 ATY42_03350 ATY42_03355 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ATY42_03355 PF00364 Biotin-requiring enzyme ATY42_03355 PF02817 e3 binding domain ATY42_03365 PF00364 Biotin-requiring enzyme ATY42_03365 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ATY42_03365 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY42_03385 PF00119 ATP synthase A chain ATY42_03390 PF00137 ATP synthase subunit C ATY42_03395 PF00430 ATP synthase B/B' CF(0) ATY42_03400 PF00213 ATP synthase delta (OSCP) subunit ATY42_03405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATY42_03405 PF00306 ATP synthase alpha/beta chain, C terminal domain ATY42_03405 PF02874 ATP synthase alpha/beta family, beta-barrel domain ATY42_03410 PF00231 ATP synthase ATY42_03415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATY42_03415 PF02874 ATP synthase alpha/beta family, beta-barrel domain ATY42_03420 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ATY42_03425 PF01817 Chorismate mutase type II ATY42_03430 PF04138 ATY42_03430 ATY42_03435 PF00132 Bacterial transferase hexapeptide (six repeats) ATY42_03435 PF12804 MobA-like NTP transferase domain ATY42_03435 PF14602 Hexapeptide repeat of succinyl-transferase ATY42_03440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_03445 PF13340 ATY42_03445 ATY42_03450 PF12760 Transposase zinc-ribbon domain ATY42_03450 PF12762 ATY42_03450 ATY42_03460 PF13586 ATY42_03460 ATY42_03470 PF00005 ABC transporter ATY42_03475 PF16576 ATY42_03475 ATY42_03480 PF01380 SIS domain ATY42_03480 PF13522 Glutamine amidotransferase domain ATY42_03495 PF13340 ATY42_03495 ATY42_03500 PF13586 ATY42_03500 ATY42_03505 PF13358 DDE superfamily endonuclease ATY42_03505 PF13551 Winged helix-turn helix ATY42_03505 PF13592 ATY42_03505 ATY42_03510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ATY42_03515 PF05275 ATY42_03515 ATY42_03520 PF00394 Multicopper oxidase ATY42_03520 PF07731 Multicopper oxidase ATY42_03520 PF07732 Multicopper oxidase ATY42_03530 PF00291 Pyridoxal-phosphate dependent enzyme ATY42_03535 PF01432 Peptidase family M3 ATY42_03545 PF00109 Beta-ketoacyl synthase, N-terminal domain ATY42_03545 PF02801 Beta-ketoacyl synthase, C-terminal domain ATY42_03550 PF07977 FabA-like domain ATY42_03555 PF00817 impB/mucB/samB family ATY42_03555 PF11799 impB/mucB/samB family C-terminal domain ATY42_03560 PF13419 Haloacid dehalogenase-like hydrolase ATY42_03565 PF04994 TfoX C-terminal domain ATY42_03570 PF13185 GAF domain ATY42_03575 PF13500 AAA domain ATY42_03580 PF09361 ATY42_03580 ATY42_03585 PF01242 6-pyruvoyl tetrahydropterin synthase ATY42_03595 PF00270 DEAD/DEAH box helicase ATY42_03595 PF00271 Helicase conserved C-terminal domain ATY42_03600 PF01557 Fumarylacetoacetate (FAA) hydrolase family ATY42_03605 PF13417 Glutathione S-transferase, N-terminal domain ATY42_03610 PF00437 Type II/IV secretion system protein ATY42_03615 PF14346 Domain of unknown function (DUF4398) ATY42_03625 PF04325 Protein of unknown function (DUF465) ATY42_03630 PF00291 Pyridoxal-phosphate dependent enzyme ATY42_03630 PF00571 CBS domain ATY42_03635 PF01053 Cys/Met metabolism PLP-dependent enzyme ATY42_03640 PF01370 NAD dependent epimerase/dehydratase family ATY42_03645 PF00534 Glycosyl transferases group 1 ATY42_03660 PF01757 ATY42_03660 ATY42_03665 PF13546 ATY42_03665 ATY42_03670 PF00872 ATY42_03670 ATY42_03680 PF00005 ABC transporter ATY42_03680 PF14524 Wzt C-terminal domain ATY42_03685 PF01061 ATY42_03685 ATY42_03690 PF00766 Electron transfer flavoprotein FAD-binding domain ATY42_03690 PF01012 Electron transfer flavoprotein domain ATY42_03695 PF01012 Electron transfer flavoprotein domain ATY42_03700 PF16363 ATY42_03700 ATY42_03705 PF00483 Nucleotidyl transferase ATY42_03710 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ATY42_03715 PF04321 RmlD substrate binding domain ATY42_03720 PF00483 Nucleotidyl transferase ATY42_03720 PF01050 Mannose-6-phosphate isomerase ATY42_03725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ATY42_03725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ATY42_03725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ATY42_03725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ATY42_03730 PF01144 Coenzyme A transferase ATY42_03735 PF01144 Coenzyme A transferase ATY42_03740 PF05045 ATY42_03740 ATY42_03740 PF14307 ATY42_03740 ATY42_03745 PF01946 Thi4 family ATY42_03745 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase ATY42_03750 PF13532 2OG-Fe(II) oxygenase superfamily ATY42_03755 PF03886 Protein of unknown function (DUF330) ATY42_03760 PF02470 ATY42_03760 ATY42_03765 PF00005 ABC transporter ATY42_03770 PF02405 ATY42_03770 ATY42_03775 PF06738 ATY42_03775 ATY42_03775 PF12821 ATY42_03775 ATY42_03780 PF00816 H-NS histone family ATY42_03785 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ATY42_03785 PF03129 Anticodon binding domain ATY42_03785 PF04073 Aminoacyl-tRNA editing domain ATY42_03790 PF13511 ATY42_03790 ATY42_03795 PF01066 CDP-alcohol phosphatidyltransferase ATY42_03805 PF00583 Acetyltransferase (GNAT) family ATY42_03810 PF13546 ATY42_03810 ATY42_03815 PF13546 ATY42_03815 ATY42_03820 PF01609 Transposase DDE domain ATY42_03820 PF05598 ATY42_03820 ATY42_03825 PF13546 ATY42_03825 ATY42_03830 PF01464 Transglycosylase SLT domain ATY42_03830 PF14718 Soluble lytic murein transglycosylase L domain ATY42_03835 PF00544 Pectate lyase ATY42_03840 PF13546 ATY42_03840 ATY42_03845 PF13340 ATY42_03845 ATY42_03850 PF01609 Transposase DDE domain ATY42_03860 PF13276 ATY42_03860 ATY42_03860 PF13683 ATY42_03860 ATY42_03865 PF01527 Transposase ATY42_03870 PF04191 Phospholipid methyltransferase ATY42_03875 PF00133 tRNA synthetases class I (I, L, M and V) ATY42_03875 PF08264 Anticodon-binding domain of tRNA ATY42_03875 PF10458 Valyl tRNA synthetase tRNA binding arm ATY42_03880 PF04364 DNA polymerase III chi subunit, HolC ATY42_03890 PF00883 Cytosol aminopeptidase family, catalytic domain ATY42_03890 PF02789 Cytosol aminopeptidase family, N-terminal domain ATY42_03895 PF03739 ATY42_03895 ATY42_03900 PF03739 ATY42_03900 ATY42_03905 PF06271 ATY42_03905 ATY42_03910 PF00589 Phage integrase family ATY42_03910 PF02899 Phage integrase, N-terminal SAM-like domain ATY42_03915 PF10411 Disulfide bond isomerase protein N-terminus ATY42_03915 PF13098 Thioredoxin-like domain ATY42_03920 PF02769 AIR synthase related protein, C-terminal domain ATY42_03920 PF13507 CobB/CobQ-like glutamine amidotransferase domain ATY42_03925 PF03895 YadA-like C-terminal region ATY42_03925 PF05658 Head domain of trimeric autotransporter adhesin ATY42_03925 PF05662 Coiled stalk of trimeric autotransporter adhesin ATY42_03925 PF13018 ATY42_03925 ATY42_03935 PF00665 Integrase core domain ATY42_03935 PF13936 Helix-turn-helix domain ATY42_03945 PF00437 Type II/IV secretion system protein ATY42_03945 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ATY42_03955 PF00482 Type II secretion system (T2SS), protein F ATY42_03960 PF08334 Type II secretion system (T2SS), protein G ATY42_03965 PF12019 Type II transport protein GspH ATY42_03970 PF07963 Prokaryotic N-terminal methylation motif ATY42_03980 PF03934 Type II secretion system (T2SS), protein K ATY42_03985 PF05137 ATY42_03985 ATY42_03990 PF10741 ATY42_03990 ATY42_04000 PF00263 ATY42_04000 ATY42_04000 PF03958 Bacterial type II/III secretion system short domain ATY42_04010 PF00392 Bacterial regulatory proteins, gntR family ATY42_04010 PF07702 UTRA domain ATY42_04015 PF04973 ATY42_04015 ATY42_04020 PF00593 TonB dependent receptor ATY42_04020 PF07715 TonB-dependent Receptor Plug Domain ATY42_04025 PF01636 Phosphotransferase enzyme family ATY42_04030 PF00535 Glycosyl transferase family 2 ATY42_04040 PF13358 DDE superfamily endonuclease ATY42_04045 PF09827 CRISPR associated protein Cas2 ATY42_04050 PF01867 CRISPR associated protein Cas1 ATY42_04055 PF01930 Domain of unknown function DUF83 ATY42_04060 PF05107 ATY42_04060 ATY42_04065 PF09709 ATY42_04065 ATY42_04070 PF09704 CRISPR-associated protein (Cas_Cas5) ATY42_04075 PF00270 DEAD/DEAH box helicase ATY42_04080 PF12760 Transposase zinc-ribbon domain ATY42_04080 PF12762 ATY42_04080 ATY42_04085 PF02545 Maf-like protein ATY42_04090 PF02620 ATY42_04090 ATY42_04095 PF01783 Ribosomal L32p protein family ATY42_04100 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ATY42_04100 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ATY42_04105 PF08670 ATY42_04105 ATY42_04110 PF00698 Acyl transferase domain ATY42_04115 PF13561 Enoyl-(Acyl carrier protein) reductase ATY42_04120 PF00550 Phosphopantetheine attachment site ATY42_04125 PF00109 Beta-ketoacyl synthase, N-terminal domain ATY42_04125 PF02801 Beta-ketoacyl synthase, C-terminal domain ATY42_04130 PF00425 chorismate binding enzyme ATY42_04130 PF04715 Anthranilate synthase component I, N terminal region ATY42_04135 PF02618 YceG-like family ATY42_04140 PF13177 DNA polymerase III, delta subunit ATY42_04145 PF07238 PilZ domain ATY42_04160 PF00158 Sigma-54 interaction domain ATY42_04160 PF02954 Bacterial regulatory protein, Fis family ATY42_04160 PF06506 Propionate catabolism activator ATY42_04165 PF13714 Phosphoenolpyruvate phosphomutase ATY42_04170 PF00285 Citrate synthase ATY42_04175 PF00330 Aconitase family (aconitate hydratase) ATY42_04175 PF00694 Aconitase C-terminal domain ATY42_04180 PF04303 PrpF protein ATY42_04185 PF01609 Transposase DDE domain ATY42_04185 PF05598 ATY42_04185 ATY42_04190 PF00593 TonB dependent receptor ATY42_04190 PF07715 TonB-dependent Receptor Plug Domain ATY42_04195 PF01156 Inosine-uridine preferring nucleoside hydrolase ATY42_04205 PF00593 TonB dependent receptor ATY42_04205 PF07715 TonB-dependent Receptor Plug Domain ATY42_04210 PF03009 Glycerophosphoryl diester phosphodiesterase family ATY42_04210 PF16387 ATY42_04210 ATY42_04220 PF13546 ATY42_04220 ATY42_04225 PF00665 Integrase core domain ATY42_04230 PF00210 Ferritin-like domain ATY42_04235 PF08534 Redoxin ATY42_04240 PF00011 Hsp20/alpha crystallin family ATY42_04245 PF00226 DnaJ domain ATY42_04245 PF01556 DnaJ C terminal domain ATY42_04250 PF00072 Response regulator receiver domain ATY42_04255 PF01145 SPFH domain / Band 7 family ATY42_04260 PF01145 SPFH domain / Band 7 family ATY42_04265 PF09838 ATY42_04265 ATY42_04270 PF00709 Adenylosuccinate synthetase ATY42_04275 PF01433 Peptidase family M1 ATY42_04275 PF11838 ERAP1-like C-terminal domain ATY42_04285 PF01609 Transposase DDE domain ATY42_04285 PF05598 ATY42_04285 ATY42_04300 PF01609 Transposase DDE domain ATY42_04300 PF05598 ATY42_04300 ATY42_04305 PF10276 Zinc-finger domain ATY42_04310 PF00534 Glycosyl transferases group 1 ATY42_04310 PF13439 Glycosyltransferase Family 4 ATY42_04315 PF04932 ATY42_04315 ATY42_04320 PF03279 ATY42_04320 ATY42_04325 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ATY42_04330 PF02321 Outer membrane efflux protein ATY42_04335 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) ATY42_04340 PF00440 Bacterial regulatory proteins, tetR family ATY42_04340 PF14246 AefR-like transcriptional repressor, C-terminal region ATY42_04345 PF07494 Two component regulator propeller ATY42_04355 PF00990 GGDEF domain ATY42_04360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY42_04360 PF03466 LysR substrate binding domain ATY42_04365 PF00330 Aconitase family (aconitate hydratase) ATY42_04370 PF00694 Aconitase C-terminal domain ATY42_04380 PF00180 Isocitrate/isopropylmalate dehydrogenase ATY42_04385 PF00682 HMGL-like ATY42_04385 PF08502 LeuA allosteric (dimerisation) domain ATY42_04390 PF00291 Pyridoxal-phosphate dependent enzyme ATY42_04395 PF13710 ACT domain ATY42_04400 PF00205 Thiamine pyrophosphate enzyme, central domain ATY42_04400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ATY42_04400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ATY42_04405 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ATY42_04405 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain ATY42_04410 PF01964 ThiC family ATY42_04410 PF13667 ThiC-associated domain ATY42_04415 PF00486 Transcriptional regulatory protein, C terminal ATY42_04415 PF07676 WD40-like Beta Propeller Repeat ATY42_04420 PF12833 Helix-turn-helix domain ATY42_04425 PF00593 TonB dependent receptor ATY42_04425 PF07715 TonB-dependent Receptor Plug Domain ATY42_04430 PF08668 HDOD domain ATY42_04435 PF00719 Inorganic pyrophosphatase ATY42_04450 PF12760 Transposase zinc-ribbon domain ATY42_04450 PF12762 ATY42_04450 ATY42_04460 PF12762 ATY42_04460 ATY42_04465 PF12760 Transposase zinc-ribbon domain ATY42_04470 PF00365 Phosphofructokinase ATY42_04475 PF00406 Adenylate kinase ATY42_04480 PF01225 Mur ligase family, catalytic domain ATY42_04480 PF02875 Mur ligase family, glutamate ligase domain ATY42_04480 PF08245 Mur ligase middle domain ATY42_04485 PF02190 ATP-dependent protease La (LON) domain ATY42_04490 PF01062 ATY42_04490 ATY42_04495 PF01609 Transposase DDE domain ATY42_04500 PF13340 ATY42_04500 ATY42_04505 PF00043 Glutathione S-transferase, C-terminal domain ATY42_04505 PF02798 Glutathione S-transferase, N-terminal domain ATY42_04510 PF00056 lactate/malate dehydrogenase, NAD binding domain ATY42_04510 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ATY42_04515 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ATY42_04520 PF00009 Elongation factor Tu GTP binding domain ATY42_04520 PF00679 Elongation factor G C-terminus ATY42_04520 PF03144 Elongation factor Tu domain 2 ATY42_04525 PF09900 ATY42_04525 ATY42_04530 PF01425 Amidase ATY42_04535 PF00924 Mechanosensitive ion channel ATY42_04540 PF01474 Class-II DAHP synthetase family ATY42_04545 PF00593 TonB dependent receptor ATY42_04545 PF07715 TonB-dependent Receptor Plug Domain ATY42_04550 PF02600 Disulfide bond formation protein DsbB ATY42_04560 PF01527 Transposase ATY42_04565 PF13276 ATY42_04565 ATY42_04565 PF13683 ATY42_04565 ATY42_04575 PF01610 ATY42_04575 ATY42_04575 PF13542 ATY42_04575 ATY42_04580 PF01609 Transposase DDE domain ATY42_04585 PF00089 Trypsin ATY42_04600 PF12760 Transposase zinc-ribbon domain ATY42_04600 PF12762 ATY42_04600 ATY42_04610 PF00665 Integrase core domain ATY42_04620 PF01610 ATY42_04620 ATY42_04620 PF13542 ATY42_04620 ATY42_04630 PF13546 ATY42_04630 ATY42_04640 PF01527 Transposase ATY42_04645 PF00665 Integrase core domain ATY42_04645 PF13936 Helix-turn-helix domain ATY42_04655 PF12760 Transposase zinc-ribbon domain ATY42_04655 PF12762 ATY42_04655 ATY42_04665 PF13586 ATY42_04665 ATY42_04670 PF13340 ATY42_04670 ATY42_04675 PF01609 Transposase DDE domain ATY42_04685 PF13546 ATY42_04685 ATY42_04690 PF01609 Transposase DDE domain ATY42_04690 PF05598 ATY42_04690 ATY42_04695 PF07486 Cell Wall Hydrolase ATY42_04700 PF16387 ATY42_04700 ATY42_04705 PF13586 ATY42_04705 ATY42_04710 PF13340 ATY42_04710 ATY42_04715 PF03009 Glycerophosphoryl diester phosphodiesterase family ATY42_04735 PF01609 Transposase DDE domain ATY42_04740 PF12760 Transposase zinc-ribbon domain ATY42_04740 PF12762 ATY42_04740 ATY42_04745 PF00180 Isocitrate/isopropylmalate dehydrogenase ATY42_04750 PF12811 ATY42_04750 ATY42_04775 PF01527 Transposase ATY42_04800 PF05697 Bacterial trigger factor protein (TF) ATY42_04800 PF05698 Bacterial trigger factor protein (TF) C-terminus ATY42_04805 PF00574 Clp protease ATY42_04810 PF06689 ClpX C4-type zinc finger ATY42_04810 PF07724 AAA domain (Cdc48 subfamily) ATY42_04810 PF10431 C-terminal, D2-small domain, of ClpB protein ATY42_04815 PF00004 ATPase family associated with various cellular activities (AAA) ATY42_04815 PF02190 ATP-dependent protease La (LON) domain ATY42_04815 PF05362 Lon protease (S16) C-terminal proteolytic domain ATY42_04820 PF00216 Bacterial DNA-binding protein ATY42_04840 PF13616 PPIC-type PPIASE domain ATY42_04840 PF13623 ATY42_04840 ATY42_04845 PF01464 Transglycosylase SLT domain ATY42_04845 PF01476 LysM domain ATY42_04850 PF00753 Metallo-beta-lactamase superfamily ATY42_04850 PF16123 ATY42_04850 ATY42_04860 PF00075 RNase H ATY42_04865 PF00929 Exonuclease ATY42_04870 PF13672 Protein phosphatase 2C ATY42_04895 PF05954 Phage late control gene D protein (GPD) ATY42_04895 PF10106 ATY42_04895 ATY42_04895 PF13296 ATY42_04895 ATY42_04900 PF11678 ATY42_04900 ATY42_04905 PF11394 ATY42_04905 ATY42_04910 PF11678 ATY42_04910 ATY42_04915 PF11394 ATY42_04915 ATY42_04930 PF12760 Transposase zinc-ribbon domain ATY42_04930 PF12762 ATY42_04930 ATY42_04935 PF00589 Phage integrase family ATY42_04945 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ATY42_04950 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family ATY42_04955 PF12706 Beta-lactamase superfamily domain ATY42_04960 PF04055 Radical SAM superfamily ATY42_04960 PF06463 Molybdenum Cofactor Synthesis C ATY42_04960 PF13353 4Fe-4S single cluster domain ATY42_04970 PF01967 MoaC family ATY42_04975 PF02597 ThiS family ATY42_04980 PF02391 MoaE protein ATY42_04990 PF12169 DNA polymerase III subunits gamma and tau domain III ATY42_04990 PF12170 DNA polymerase III tau subunit V interacting with alpha ATY42_04990 PF13177 DNA polymerase III, delta subunit ATY42_04995 PF02575 YbaB/EbfC DNA-binding family ATY42_05000 PF02132 RecR protein ATY42_05000 PF13662 Toprim domain ATY42_05005 PF01230 HIT domain ATY42_05010 PF03843 ATY42_05010 ATY42_05015 PF01841 Transglutaminase-like superfamily ATY42_05015 PF11992 ATY42_05015 ATY42_05020 PF01882 ATY42_05020 ATY42_05025 PF07726 ATPase family associated with various cellular activities (AAA) ATY42_05030 PF13231 ATY42_05030 ATY42_05045 PF01327 Polypeptide deformylase ATY42_05055 PF01670 Glycosyl hydrolase family 12 ATY42_05060 PF09284 Rhamnogalacturonase B, N-terminal ATY42_05060 PF14683 Polysaccharide lyase family 4, domain III ATY42_05060 PF14686 Polysaccharide lyase family 4, domain II ATY42_05070 PF01610 ATY42_05070 ATY42_05070 PF13542 ATY42_05070 ATY42_05080 PF01609 Transposase DDE domain ATY42_05080 PF05598 ATY42_05080 ATY42_05090 PF14487 ATY42_05090 ATY42_05095 PF13546 ATY42_05095 ATY42_05100 PF00462 Glutaredoxin ATY42_05100 PF00581 Rhodanese-like domain ATY42_05105 PF01522 Polysaccharide deacetylase ATY42_05110 PF08242 Methyltransferase domain ATY42_05115 PF13472 GDSL-like Lipase/Acylhydrolase family ATY42_05120 PF00155 Aminotransferase class I and II ATY42_05125 PF03193 Protein of unknown function, DUF258 ATY42_05130 PF08014 ATY42_05130 ATY42_05135 PF01965 DJ-1/PfpI family ATY42_05140 PF00128 Alpha amylase, catalytic domain ATY42_05145 PF00593 TonB dependent receptor ATY42_05145 PF07715 TonB-dependent Receptor Plug Domain ATY42_05150 PF07690 Major Facilitator Superfamily ATY42_05155 PF00356 Bacterial regulatory proteins, lacI family ATY42_05155 PF13377 Periplasmic binding protein-like domain ATY42_05160 PF13561 Enoyl-(Acyl carrier protein) reductase ATY42_05165 PF03600 Citrate transporter ATY42_05170 PF07396 Phosphate-selective porin O and P ATY42_05175 PF00072 Response regulator receiver domain ATY42_05175 PF00486 Transcriptional regulatory protein, C terminal ATY42_05180 PF00512 His Kinase A (phospho-acceptor) domain ATY42_05180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_05180 PF08521 ATY42_05180 ATY42_05185 PF13531 Bacterial extracellular solute-binding protein ATY42_05190 PF00072 Response regulator receiver domain ATY42_05190 PF00196 Bacterial regulatory proteins, luxR family ATY42_05195 PF11512 Agrobacterium tumefaciens protein Atu4866 ATY42_05210 PF00248 Aldo/keto reductase family ATY42_05215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY42_05215 PF03466 LysR substrate binding domain ATY42_05220 PF13531 Bacterial extracellular solute-binding protein ATY42_05225 PF00083 Sugar (and other) transporter ATY42_05230 PF00072 Response regulator receiver domain ATY42_05230 PF00512 His Kinase A (phospho-acceptor) domain ATY42_05230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_05230 PF02743 Cache domain ATY42_05230 PF12860 ATY42_05230 ATY42_05235 PF07396 Phosphate-selective porin O and P ATY42_05245 PF00390 Malic enzyme, N-terminal domain ATY42_05245 PF01515 Phosphate acetyl/butaryl transferase ATY42_05245 PF03949 Malic enzyme, NAD binding domain ATY42_05255 PF01527 Transposase ATY42_05260 PF13276 ATY42_05260 ATY42_05260 PF13683 ATY42_05260 ATY42_05285 PF02581 Thiamine monophosphate synthase/TENI ATY42_05290 PF00301 Rubredoxin ATY42_05295 PF13369 ATY42_05295 ATY42_05295 PF13371 Tetratricopeptide repeat ATY42_05300 PF02643 Uncharacterized ACR, COG1430 ATY42_05305 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ATY42_05310 PF01878 EVE domain ATY42_05315 PF01812 5-formyltetrahydrofolate cyclo-ligase family ATY42_05320 PF05164 Cell division protein ZapA ATY42_05330 PF03695 Uncharacterised protein family (UPF0149) ATY42_05335 PF00557 Metallopeptidase family M24 ATY42_05335 PF05195 Aminopeptidase P, N-terminal domain ATY42_05345 PF13586 ATY42_05345 ATY42_05350 PF13340 ATY42_05350 ATY42_05355 PF00557 Metallopeptidase family M24 ATY42_05360 PF07238 PilZ domain ATY42_05365 PF07793 ATY42_05365 ATY42_05370 PF04055 Radical SAM superfamily ATY42_05370 PF06969 HemN C-terminal domain ATY42_05375 PF01725 Ham1 family ATY42_05380 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ATY42_05385 PF01138 3' exoribonuclease family, domain 1 ATY42_05385 PF03725 3' exoribonuclease family, domain 2 ATY42_05390 PF03755 ATY42_05390 ATY42_05390 PF08340 ATY42_05390 ATY42_05395 PF00625 Guanylate kinase ATY42_05400 PF01609 Transposase DDE domain ATY42_05405 PF01192 RNA polymerase Rpb6 ATY42_05410 PF02824 TGS domain ATY42_05410 PF04607 Region found in RelA / SpoT proteins ATY42_05410 PF13291 ACT domain ATY42_05410 PF13328 HD domain ATY42_05415 PF01042 Endoribonuclease L-PSP ATY42_05420 PF00270 DEAD/DEAH box helicase ATY42_05420 PF00271 Helicase conserved C-terminal domain ATY42_05420 PF17191 ATY42_05420 ATY42_05425 PF01156 Inosine-uridine preferring nucleoside hydrolase ATY42_05430 PF01197 Ribosomal protein L31 ATY42_05435 PF00285 Citrate synthase ATY42_05440 PF13546 ATY42_05440 ATY42_05450 PF00905 Penicillin binding protein transpeptidase domain ATY42_05450 PF00912 Transglycosylase ATY42_05450 PF17092 ATY42_05450 ATY42_05455 PF11104 Type IV pilus assembly protein PilM; ATY42_05460 PF05137 ATY42_05460 ATY42_05465 PF04350 Pilus assembly protein, PilO ATY42_05470 PF04351 Pilus assembly protein, PilP ATY42_05475 PF00263 ATY42_05475 ATY42_05475 PF03958 Bacterial type II/III secretion system short domain ATY42_05475 PF07660 Secretin and TonB N terminus short domain ATY42_05480 PF01609 Transposase DDE domain ATY42_05485 PF01610 ATY42_05485 ATY42_05485 PF13542 ATY42_05485 ATY42_05495 PF07726 ATPase family associated with various cellular activities (AAA) ATY42_05500 PF01882 ATY42_05500 ATY42_05505 PF14316 ATY42_05505 ATY42_05510 PF00092 von Willebrand factor type A domain ATY42_05515 PF00515 Tetratricopeptide repeat ATY42_05515 PF13519 von Willebrand factor type A domain ATY42_05520 PF13584 ATY42_05520 ATY42_05525 PF12395 ATY42_05525 ATY42_05530 PF00375 Sodium:dicarboxylate symporter family ATY42_05535 PF00456 Transketolase, thiamine diphosphate binding domain ATY42_05535 PF02779 Transketolase, pyrimidine binding domain ATY42_05535 PF02780 Transketolase, C-terminal domain ATY42_05545 PF01551 Peptidase family M23 ATY42_05550 PF01471 Putative peptidoglycan binding domain ATY42_05550 PF03734 L,D-transpeptidase catalytic domain ATY42_05555 PF00593 TonB dependent receptor ATY42_05555 PF07715 TonB-dependent Receptor Plug Domain ATY42_05560 PF16670 ATY42_05560 ATY42_05565 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ATY42_05570 PF12261 ATY42_05570 ATY42_05575 PF00501 AMP-binding enzyme ATY42_05580 PF14518 Iron-containing redox enzyme ATY42_05585 PF00106 short chain dehydrogenase ATY42_05595 PF00072 Response regulator receiver domain ATY42_05595 PF00486 Transcriptional regulatory protein, C terminal ATY42_05600 PF00512 His Kinase A (phospho-acceptor) domain ATY42_05600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_05600 PF08521 ATY42_05600 ATY42_05605 PF03965 Penicillinase repressor ATY42_05610 PF03544 Gram-negative bacterial TonB protein C-terminal ATY42_05610 PF05569 BlaR1 peptidase M56 ATY42_05620 PF00005 ABC transporter ATY42_05625 PF00528 Binding-protein-dependent transport system inner membrane component ATY42_05630 PF13531 Bacterial extracellular solute-binding protein ATY42_05635 PF00753 Metallo-beta-lactamase superfamily ATY42_05640 PF02265 S1/P1 Nuclease ATY42_05670 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ATY42_05670 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ATY42_05675 PF13340 ATY42_05675 ATY42_05680 PF13586 ATY42_05680 ATY42_05685 PF12760 Transposase zinc-ribbon domain ATY42_05685 PF12762 ATY42_05685 ATY42_05690 PF00512 His Kinase A (phospho-acceptor) domain ATY42_05690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_05695 PF00072 Response regulator receiver domain ATY42_05695 PF00486 Transcriptional regulatory protein, C terminal ATY42_05705 PF08443 RimK-like ATP-grasp domain ATY42_05715 PF01569 PAP2 superfamily ATY42_05715 PF09335 ATY42_05715 ATY42_05715 PF14067 ATY42_05715 ATY42_05725 PF01609 Transposase DDE domain ATY42_05735 PF12889 Protein of unknown function (DUF3829) ATY42_05740 PF12889 Protein of unknown function (DUF3829) ATY42_05745 PF00520 Ion transport protein ATY42_05750 PF00202 Aminotransferase class-III ATY42_05755 PF13419 Haloacid dehalogenase-like hydrolase ATY42_05765 PF01593 Flavin containing amine oxidoreductase ATY42_05770 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ATY42_05775 PF01042 Endoribonuclease L-PSP ATY42_05785 PF00155 Aminotransferase class I and II ATY42_05795 PF00127 Copper binding proteins, plastocyanin/azurin family ATY42_05805 PF00202 Aminotransferase class-III ATY42_05810 PF07715 TonB-dependent Receptor Plug Domain ATY42_05810 PF13620 Carboxypeptidase regulatory-like domain ATY42_05815 PF00665 Integrase core domain ATY42_05815 PF13936 Helix-turn-helix domain ATY42_05830 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY42_05845 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY42_05860 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY42_05875 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY42_05895 PF01208 Uroporphyrinogen decarboxylase (URO-D) ATY42_05905 PF01761 3-dehydroquinate synthase ATY42_05910 PF01202 Shikimate kinase ATY42_05915 PF01243 Pyridoxamine 5'-phosphate oxidase ATY42_05915 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ATY42_05920 PF09938 ATY42_05920 ATY42_05925 PF04012 ATY42_05925 ATY42_05930 PF07885 Ion channel ATY42_05935 PF10679 ATY42_05935 ATY42_05940 PF03994 ATY42_05940 ATY42_05945 PF06693 ATY42_05945 ATY42_05950 PF03738 Glutathionylspermidine synthase preATP-grasp ATY42_05975 PF00376 MerR family regulatory protein ATY42_05975 PF09278 MerR, DNA binding ATY42_05980 PF01433 Peptidase family M1 ATY42_05990 PF00593 TonB dependent receptor ATY42_05990 PF07715 TonB-dependent Receptor Plug Domain ATY42_05995 PF07277 ATY42_05995 ATY42_06000 PF13621 Cupin-like domain ATY42_06005 PF04820 Tryptophan halogenase ATY42_06010 PF12706 Beta-lactamase superfamily domain ATY42_06025 PF13365 Trypsin-like peptidase domain ATY42_06030 PF13520 Amino acid permease ATY42_06035 PF00196 Bacterial regulatory proteins, luxR family ATY42_06035 PF03472 Autoinducer binding domain ATY42_06040 PF00561 alpha/beta hydrolase fold ATY42_06045 PF00324 Amino acid permease ATY42_06050 PF01610 ATY42_06050 ATY42_06050 PF13542 ATY42_06050 ATY42_06055 PF01654 ATY42_06055 ATY42_06060 PF02322 ATY42_06060 ATY42_06065 PF00326 Prolyl oligopeptidase family ATY42_06070 PF00571 CBS domain ATY42_06070 PF01769 Divalent cation transporter ATY42_06070 PF03448 MgtE intracellular N domain ATY42_06075 PF00391 PEP-utilising enzyme, mobile domain ATY42_06075 PF02896 PEP-utilising enzyme, TIM barrel domain ATY42_06075 PF05524 PEP-utilising enzyme, N-terminal ATY42_06080 PF00381 PTS HPr component phosphorylation site ATY42_06085 PF03610 PTS system fructose IIA component ATY42_06090 PF03668 ATY42_06090 ATY42_06095 PF02603 HPr Serine kinase N terminus ATY42_06095 PF07475 HPr Serine kinase C-terminal domain ATY42_06100 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ATY42_06105 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ATY42_06110 PF00309 ATY42_06110 ATY42_06110 PF04552 Sigma-54, DNA binding domain ATY42_06110 PF04963 Sigma-54 factor, core binding domain ATY42_06115 PF00005 ABC transporter ATY42_06115 PF12399 Branched-chain amino acid ATP-binding cassette transporter ATY42_06120 PF03968 OstA-like protein ATY42_06125 PF06835 Lipopolysaccharide-assembly, LptC-related ATY42_06130 PF08282 haloacid dehalogenase-like hydrolase ATY42_06135 PF00571 CBS domain ATY42_06135 PF01380 SIS domain ATY42_06140 PF01722 BolA-like protein ATY42_06145 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ATY42_06155 PF11306 Protein of unknown function (DUF3108) ATY42_06160 PF11306 Protein of unknown function (DUF3108) ATY42_06165 PF00551 Formyl transferase ATY42_06170 PF09997 ATY42_06170 ATY42_06180 PF00586 AIR synthase related protein, N-terminal domain ATY42_06180 PF02769 AIR synthase related protein, C-terminal domain ATY42_06185 PF09839 ATY42_06185 ATY42_06190 PF01594 ATY42_06190 ATY42_06195 PF00308 Bacterial dnaA protein ATY42_06200 PF00483 Nucleotidyl transferase ATY42_06205 PF01636 Phosphotransferase enzyme family ATY42_06210 PF04226 ATY42_06210 ATY42_06220 PF13358 DDE superfamily endonuclease ATY42_06220 PF13592 ATY42_06220 ATY42_06225 PF01546 Peptidase family M20/M25/M40 ATY42_06225 PF07687 Peptidase dimerisation domain ATY42_06230 PF12836 Helix-hairpin-helix motif ATY42_06250 PF05962 HutD ATY42_06255 PF05598 ATY42_06255 ATY42_06275 PF06964 Alpha-L-arabinofuranosidase C-terminus ATY42_06280 PF01263 Aldose 1-epimerase ATY42_06285 PF01578 ATY42_06285 ATY42_06295 PF00448 SRP54-type protein, GTPase domain ATY42_06295 PF02881 SRP54-type protein, helical bundle domain ATY42_06295 PF02978 Signal peptide binding domain ATY42_06305 PF03060 Nitronate monooxygenase ATY42_06310 PF01063 Aminotransferase class IV ATY42_06315 PF00886 Ribosomal protein S16 ATY42_06320 PF01782 RimM N-terminal domain ATY42_06320 PF05239 PRC-barrel domain ATY42_06325 PF01746 tRNA (Guanine-1)-methyltransferase ATY42_06330 PF01245 Ribosomal protein L19 ATY42_06335 PF01554 MatE ATY42_06340 PF01479 S4 domain ATY42_06345 PF01609 Transposase DDE domain ATY42_06350 PF13546 ATY42_06350 ATY42_06360 PF01541 GIY-YIG catalytic domain ATY42_06365 PF00004 ATPase family associated with various cellular activities (AAA) ATY42_06365 PF02861 Clp amino terminal domain ATY42_06365 PF07724 AAA domain (Cdc48 subfamily) ATY42_06365 PF10431 C-terminal, D2-small domain, of ClpB protein ATY42_06380 PF01527 Transposase ATY42_06385 PF13751 ATY42_06385 ATY42_06395 PF00593 TonB dependent receptor ATY42_06395 PF07715 TonB-dependent Receptor Plug Domain ATY42_06400 PF13546 ATY42_06400 ATY42_06415 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ATY42_06415 PF12557 Cob(I)alamin adenosyltransferase N terminal ATY42_06425 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ATY42_06430 PF02277 Phosphoribosyltransferase ATY42_06435 PF00300 Histidine phosphatase superfamily (branch 1) ATY42_06440 PF02654 ATY42_06440 ATY42_06445 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ATY42_06445 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ATY42_06450 PF04183 IucA / IucC family ATY42_06450 PF06276 Ferric iron reductase FhuF-like transporter ATY42_06455 PF07690 Major Facilitator Superfamily ATY42_06460 PF04183 IucA / IucC family ATY42_06460 PF06276 Ferric iron reductase FhuF-like transporter ATY42_06470 PF00593 TonB dependent receptor ATY42_06470 PF07715 TonB-dependent Receptor Plug Domain ATY42_06475 PF03328 HpcH/HpaI aldolase/citrate lyase family ATY42_06480 PF13276 ATY42_06480 ATY42_06480 PF13683 ATY42_06480 ATY42_06485 PF00999 Sodium/hydrogen exchanger family ATY42_06485 PF02254 TrkA-N domain ATY42_06495 PF00593 TonB dependent receptor ATY42_06495 PF07715 TonB-dependent Receptor Plug Domain ATY42_06500 PF00593 TonB dependent receptor ATY42_06500 PF07715 TonB-dependent Receptor Plug Domain ATY42_06505 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ATY42_06510 PF00593 TonB dependent receptor ATY42_06510 PF07715 TonB-dependent Receptor Plug Domain ATY42_06515 PF00005 ABC transporter ATY42_06515 PF12848 ABC transporter ATY42_06515 PF16326 ATY42_06515 ATY42_06530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY42_06530 PF03466 LysR substrate binding domain ATY42_06540 PF07859 alpha/beta hydrolase fold ATY42_06545 PF05598 ATY42_06545 ATY42_06560 PF00486 Transcriptional regulatory protein, C terminal ATY42_06565 PF12833 Helix-turn-helix domain ATY42_06570 PF00183 Hsp90 protein ATY42_06570 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_06580 PF01609 Transposase DDE domain ATY42_06585 PF00665 Integrase core domain ATY42_06590 PF01527 Transposase ATY42_06595 PF05598 ATY42_06595 ATY42_06600 PF00872 ATY42_06600 ATY42_06610 PF00487 ATY42_06610 ATY42_06615 PF01053 Cys/Met metabolism PLP-dependent enzyme ATY42_06620 PF13683 ATY42_06620 ATY42_06625 PF12760 Transposase zinc-ribbon domain ATY42_06625 PF12762 ATY42_06625 ATY42_06630 PF00665 Integrase core domain ATY42_06630 PF13276 ATY42_06630 ATY42_06635 PF01527 Transposase ATY42_06640 PF01609 Transposase DDE domain ATY42_06645 PF00355 Rieske [2Fe-2S] domain ATY42_06650 PF13673 Acetyltransferase (GNAT) domain ATY42_06655 PF00266 Aminotransferase class-V ATY42_06660 PF01458 Uncharacterized protein family (UPF0051) ATY42_06665 PF00005 ABC transporter ATY42_06670 PF01458 Uncharacterized protein family (UPF0051) ATY42_06675 PF02082 Transcriptional regulator ATY42_06680 PF00856 SET domain ATY42_06695 PF07273 Protein of unknown function (DUF1439) ATY42_06705 PF12977 Domain of Unknown Function with PDB structure (DUF3861) ATY42_06710 PF01551 Peptidase family M23 ATY42_06715 PF00216 Bacterial DNA-binding protein ATY42_06725 PF03807 NADP oxidoreductase coenzyme F420-dependent ATY42_06725 PF14748 Pyrroline-5-carboxylate reductase dimerisation ATY42_06730 PF01168 Alanine racemase, N-terminal domain ATY42_06735 PF01609 Transposase DDE domain ATY42_06735 PF05598 ATY42_06735 ATY42_06740 PF00437 Type II/IV secretion system protein ATY42_06745 PF00437 Type II/IV secretion system protein ATY42_06750 PF02588 ATY42_06750 ATY42_06760 PF03352 Methyladenine glycosylase ATY42_06775 PF02622 Uncharacterized ACR, COG1678 ATY42_06780 PF03652 Uncharacterised protein family (UPF0081) ATY42_06785 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ATY42_06785 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ATY42_06790 PF02566 OsmC-like protein ATY42_06795 PF05433 ATY42_06795 ATY42_06800 PF02567 Phenazine biosynthesis-like protein ATY42_06805 PF02567 Phenazine biosynthesis-like protein ATY42_06810 PF02567 Phenazine biosynthesis-like protein ATY42_06815 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ATY42_06815 PF00696 Amino acid kinase family ATY42_06815 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ATY42_06830 PF08245 Mur ligase middle domain ATY42_06840 PF01738 Dienelactone hydrolase family ATY42_06845 PF00348 Polyprenyl synthetase ATY42_06850 PF00436 Single-strand binding protein family ATY42_06860 PF00990 GGDEF domain ATY42_06860 PF02743 Cache domain ATY42_06865 PF00107 Zinc-binding dehydrogenase ATY42_06865 PF08240 Alcohol dehydrogenase GroES-like domain ATY42_06870 PF13602 Zinc-binding dehydrogenase ATY42_06880 PF12760 Transposase zinc-ribbon domain ATY42_06880 PF12762 ATY42_06880 ATY42_06885 PF13419 Haloacid dehalogenase-like hydrolase ATY42_06890 PF04328 ATY42_06890 ATY42_06895 PF02554 ATY42_06895 ATY42_06895 PF13722 ATY42_06895 ATY42_06900 PF02678 Pirin ATY42_06900 PF05726 Pirin C-terminal cupin domain ATY42_06905 PF02566 OsmC-like protein ATY42_06910 PF05954 Phage late control gene D protein (GPD) ATY42_06910 PF10106 ATY42_06910 ATY42_06910 PF13296 ATY42_06910 ATY42_06915 PF13503 ATY42_06915 ATY42_06925 PF11745 ATY42_06925 ATY42_06930 PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) ATY42_06935 PF10106 ATY42_06935 ATY42_06935 PF13296 ATY42_06935 ATY42_06940 PF13503 ATY42_06940 ATY42_06945 PF11745 ATY42_06945 ATY42_06950 PF11745 ATY42_06950 ATY42_06955 PF11745 ATY42_06955 ATY42_06960 PF11745 ATY42_06960 ATY42_06965 PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) ATY42_06975 PF02678 Pirin ATY42_06975 PF05726 Pirin C-terminal cupin domain ATY42_06985 PF04493 Endonuclease V ATY42_06990 PF00300 Histidine phosphatase superfamily (branch 1) ATY42_07000 PF01431 Peptidase family M13 ATY42_07000 PF05649 Peptidase family M13 ATY42_07010 PF00072 Response regulator receiver domain ATY42_07010 PF01339 CheB methylesterase ATY42_07015 PF01739 CheR methyltransferase, SAM binding domain ATY42_07015 PF03705 CheR methyltransferase, all-alpha domain ATY42_07020 PF00072 Response regulator receiver domain ATY42_07020 PF00563 EAL domain ATY42_07025 PF01584 CheW-like domain ATY42_07030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY42_07035 PF01584 CheW-like domain ATY42_07035 PF01627 Hpt domain ATY42_07035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_07035 PF02895 Signal transducing histidine kinase, homodimeric domain ATY42_07040 PF13466 STAS domain ATY42_07045 PF00270 DEAD/DEAH box helicase ATY42_07045 PF00271 Helicase conserved C-terminal domain ATY42_07045 PF02559 CarD-like/TRCF domain ATY42_07045 PF03461 TRCF domain ATY42_07050 PF13302 Acetyltransferase (GNAT) domain ATY42_07055 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ ATY42_07060 PF01609 Transposase DDE domain ATY42_07065 PF00512 His Kinase A (phospho-acceptor) domain ATY42_07065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_07070 PF13551 Winged helix-turn helix ATY42_07070 PF13592 ATY42_07070 ATY42_07075 PF13358 DDE superfamily endonuclease ATY42_07080 PF00112 Papain family cysteine protease ATY42_07085 PF06123 ATY42_07085 ATY42_07090 PF01609 Transposase DDE domain ATY42_07090 PF05598 ATY42_07090 ATY42_07095 PF13358 DDE superfamily endonuclease ATY42_07095 PF13551 Winged helix-turn helix ATY42_07095 PF13592 ATY42_07095 ATY42_07100 PF00112 Papain family cysteine protease ATY42_07105 PF06123 ATY42_07105 ATY42_07110 PF01609 Transposase DDE domain ATY42_07110 PF05598 ATY42_07110 ATY42_07115 PF01609 Transposase DDE domain ATY42_07115 PF05598 ATY42_07115 ATY42_07120 PF00112 Papain family cysteine protease ATY42_07130 PF13936 Helix-turn-helix domain ATY42_07135 PF00795 Carbon-nitrogen hydrolase ATY42_07145 PF00749 tRNA synthetases class I (E and Q), catalytic domain ATY42_07150 PF01475 Ferric uptake regulator family ATY42_07155 PF07883 Cupin domain ATY42_07170 PF04306 ATY42_07170 ATY42_07175 PF00313 'Cold-shock' DNA-binding domain ATY42_07180 PF05433 ATY42_07180 ATY42_07185 PF01322 Cytochrome C' ATY42_07190 PF00899 ThiF family ATY42_07195 PF01026 TatD related DNase ATY42_07205 PF05433 ATY42_07205 ATY42_07210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATY42_07210 PF02770 Acyl-CoA dehydrogenase, middle domain ATY42_07210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATY42_07235 PF00043 Glutathione S-transferase, C-terminal domain ATY42_07235 PF02798 Glutathione S-transferase, N-terminal domain ATY42_07240 PF00733 Asparagine synthase ATY42_07240 PF13537 Glutamine amidotransferase domain ATY42_07245 PF03358 NADPH-dependent FMN reductase ATY42_07250 PF00772 DnaB-like helicase N terminal domain ATY42_07250 PF03796 DnaB-like helicase C terminal domain ATY42_07255 PF00875 DNA photolyase ATY42_07255 PF03441 FAD binding domain of DNA photolyase ATY42_07265 PF00691 OmpA family ATY42_07265 PF13488 ATY42_07265 ATY42_07270 PF13561 Enoyl-(Acyl carrier protein) reductase ATY42_07280 PF00593 TonB dependent receptor ATY42_07280 PF07715 TonB-dependent Receptor Plug Domain ATY42_07285 PF00593 TonB dependent receptor ATY42_07285 PF07715 TonB-dependent Receptor Plug Domain ATY42_07295 PF03203 ATY42_07295 ATY42_07300 PF17067 ATY42_07300 ATY42_07305 PF00107 Zinc-binding dehydrogenase ATY42_07305 PF08240 Alcohol dehydrogenase GroES-like domain ATY42_07310 PF00654 Voltage gated chloride channel ATY42_07315 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase ATY42_07320 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ATY42_07320 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ATY42_07325 PF00730 HhH-GPD superfamily base excision DNA repair protein ATY42_07325 PF02805 Metal binding domain of Ada ATY42_07325 PF06029 AlkA N-terminal domain ATY42_07325 PF12833 Helix-turn-helix domain ATY42_07345 PF13211 ATY42_07345 ATY42_07350 PF01124 MAPEG family ATY42_07360 PF13275 S4 domain ATY42_07375 PF00270 DEAD/DEAH box helicase ATY42_07375 PF00271 Helicase conserved C-terminal domain ATY42_07375 PF03880 DbpA RNA binding domain ATY42_07380 PF00563 EAL domain ATY42_07380 PF00990 GGDEF domain ATY42_07385 PF00849 RNA pseudouridylate synthase ATY42_07385 PF01479 S4 domain ATY42_07390 PF00892 EamA-like transporter family ATY42_07400 PF03737 Demethylmenaquinone methyltransferase ATY42_07405 PF00144 Beta-lactamase ATY42_07405 PF11954 ATY42_07405 ATY42_07410 PF00999 Sodium/hydrogen exchanger family ATY42_07415 PF00512 His Kinase A (phospho-acceptor) domain ATY42_07415 PF00672 HAMP domain ATY42_07415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_07420 PF00072 Response regulator receiver domain ATY42_07420 PF00486 Transcriptional regulatory protein, C terminal ATY42_07425 PF02321 Outer membrane efflux protein ATY42_07430 PF06629 ATY42_07430 ATY42_07435 PF13437 HlyD family secretion protein ATY42_07435 PF13533 Biotin-lipoyl like ATY42_07440 PF00873 AcrB/AcrD/AcrF family ATY42_07445 PF07929 Plasmid pRiA4b ORF-3-like protein ATY42_07450 PF00005 ABC transporter ATY42_07450 PF00664 ABC transporter transmembrane region ATY42_07455 PF13586 ATY42_07455 ATY42_07460 PF13340 ATY42_07460 ATY42_07465 PF13546 ATY42_07465 ATY42_07470 PF01609 Transposase DDE domain ATY42_07470 PF05598 ATY42_07470 ATY42_07475 PF05593 ATY42_07475 ATY42_07475 PF15523 ATY42_07475 ATY42_07480 PF01609 Transposase DDE domain ATY42_07480 PF05598 ATY42_07480 ATY42_07490 PF01609 Transposase DDE domain ATY42_07490 PF05598 ATY42_07490 ATY42_07500 PF13936 Helix-turn-helix domain ATY42_07505 PF13546 ATY42_07505 ATY42_07510 PF01121 Dephospho-CoA kinase ATY42_07515 PF01478 Type IV leader peptidase family ATY42_07515 PF06750 ATY42_07515 ATY42_07520 PF00482 Type II secretion system (T2SS), protein F ATY42_07525 PF00114 Pilin (bacterial filament) ATY42_07525 PF07963 Prokaryotic N-terminal methylation motif ATY42_07530 PF00884 Sulfatase ATY42_07540 PF01564 Spermine/spermidine synthase ATY42_07545 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ATY42_07550 PF01609 Transposase DDE domain ATY42_07550 PF05598 ATY42_07550 ATY42_07560 PF02661 Fic/DOC family ATY42_07565 PF00072 Response regulator receiver domain ATY42_07565 PF00158 Sigma-54 interaction domain ATY42_07565 PF02954 Bacterial regulatory protein, Fis family ATY42_07570 PF00512 His Kinase A (phospho-acceptor) domain ATY42_07570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_07575 PF00549 CoA-ligase ATY42_07575 PF08442 ATP-grasp domain ATY42_07580 PF00549 CoA-ligase ATY42_07580 PF02629 CoA binding domain ATY42_07590 PF00795 Carbon-nitrogen hydrolase ATY42_07590 PF02540 NAD synthase ATY42_07595 PF13525 Outer membrane lipoprotein ATY42_07600 PF00849 RNA pseudouridylate synthase ATY42_07605 PF02578 Multi-copper polyphenol oxidoreductase laccase ATY42_07610 PF13761 ATY42_07610 ATY42_07615 PF04134 ATY42_07615 ATY42_07620 PF00982 Glycosyltransferase family 20 ATY42_07625 PF00723 Glycosyl hydrolases family 15 ATY42_07630 PF02358 Trehalose-phosphatase ATY42_07640 PF00593 TonB dependent receptor ATY42_07640 PF07715 TonB-dependent Receptor Plug Domain ATY42_07645 PF12098 ATY42_07645 ATY42_07650 PF14486 Domain of unknown function (DUF4432) ATY42_07660 PF03372 Endonuclease/Exonuclease/phosphatase family ATY42_07665 PF04376 ATY42_07665 ATY42_07665 PF04377 ATY42_07665 ATY42_07670 PF13202 EF hand ATY42_07675 PF01609 Transposase DDE domain ATY42_07685 PF04542 Sigma-70 region 2 ATY42_07695 PF13622 Thioesterase-like superfamily ATY42_07700 PF00378 Enoyl-CoA hydratase/isomerase family ATY42_07705 PF04314 Protein of unknown function (DUF461) ATY42_07710 PF13279 Thioesterase-like superfamily ATY42_07720 PF00829 Ribosomal prokaryotic L21 protein ATY42_07725 PF01016 Ribosomal L27 protein ATY42_07730 PF01018 GTP1/OBG ATY42_07730 PF01926 50S ribosome-binding GTPase ATY42_07735 PF01649 Ribosomal protein S20 ATY42_07740 PF03023 ATY42_07740 ATY42_07745 PF01687 Riboflavin kinase ATY42_07745 PF06574 FAD synthetase ATY42_07750 PF00133 tRNA synthetases class I (I, L, M and V) ATY42_07750 PF06827 Zinc finger found in FPG and IleRS ATY42_07750 PF08264 Anticodon-binding domain of tRNA ATY42_07755 PF01252 ATY42_07755 ATY42_07760 PF02401 LytB protein ATY42_07770 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ATY42_07770 PF06481 COX Aromatic Rich Motif ATY42_07775 PF00115 Cytochrome C and Quinol oxidase polypeptide I ATY42_07780 PF00510 Cytochrome c oxidase subunit III ATY42_07785 PF03626 ATY42_07785 ATY42_07790 PF05299 M61 glycyl aminopeptidase ATY42_07790 PF07720 Tetratricopeptide repeat ATY42_07795 PF05954 Phage late control gene D protein (GPD) ATY42_07810 PF14435 ATY42_07810 ATY42_07815 PF03527 ATY42_07815 ATY42_07815 PF05593 ATY42_07815 ATY42_07815 PF14440 ATY42_07815 ATY42_07820 PF14435 ATY42_07820 ATY42_07825 PF05593 ATY42_07825 ATY42_07830 PF01527 Transposase ATY42_07835 PF13276 ATY42_07835 ATY42_07835 PF13683 ATY42_07835 ATY42_07850 PF00488 MutS domain V ATY42_07850 PF01624 MutS domain I ATY42_07850 PF05188 MutS domain II ATY42_07850 PF05190 MutS family domain IV ATY42_07850 PF05192 MutS domain III ATY42_07860 PF13276 ATY42_07860 ATY42_07860 PF13683 ATY42_07860 ATY42_07865 PF01527 Transposase ATY42_07875 PF13481 AAA domain ATY42_07875 PF13541 Subunit ChlI of Mg-chelatase ATY42_07885 PF01527 Transposase ATY42_07890 PF13231 ATY42_07890 ATY42_07895 PF04185 Phosphoesterase family ATY42_07895 PF05506 ATY42_07895 ATY42_07900 PF04185 Phosphoesterase family ATY42_07905 PF04185 Phosphoesterase family ATY42_07910 PF07690 Major Facilitator Superfamily ATY42_07915 PF09723 ATY42_07915 ATY42_07920 PF11218 ATY42_07920 ATY42_07925 PF00152 tRNA synthetases class II (D, K and N) ATY42_07925 PF01336 OB-fold nucleic acid binding domain ATY42_07925 PF02938 GAD domain ATY42_07930 PF00583 Acetyltransferase (GNAT) family ATY42_07935 PF06259 Alpha/beta hydrolase ATY42_07940 PF01709 Transcriptional regulator ATY42_07945 PF02075 Crossover junction endodeoxyribonuclease RuvC ATY42_07950 PF01330 RuvA N terminal domain ATY42_07950 PF07499 RuvA, C-terminal domain ATY42_07950 PF14520 Helix-hairpin-helix domain ATY42_07955 PF02705 ATY42_07955 ATY42_07960 PF05491 Holliday junction DNA helicase ruvB C-terminus ATY42_07960 PF05496 Holliday junction DNA helicase ruvB N-terminus ATY42_07965 PF03061 Thioesterase superfamily ATY42_07970 PF01618 ATY42_07970 ATY42_07975 PF02472 Biopolymer transport protein ExbD/TolR ATY42_07980 PF13103 TonB C terminal ATY42_07985 PF04052 TolB amino-terminal domain ATY42_07985 PF07676 WD40-like Beta Propeller Repeat ATY42_07990 PF00691 OmpA family ATY42_07995 PF13525 Outer membrane lipoprotein ATY42_07995 PF16331 ATY42_07995 ATY42_08000 PF04055 Radical SAM superfamily ATY42_08000 PF13394 4Fe-4S single cluster domain ATY42_08005 PF01479 S4 domain ATY42_08040 PF01610 ATY42_08040 ATY42_08040 PF13542 ATY42_08040 ATY42_08045 PF13586 ATY42_08045 ATY42_08050 PF13340 ATY42_08050 ATY42_08055 PF01609 Transposase DDE domain ATY42_08055 PF05598 ATY42_08055 ATY42_08060 PF06508 Queuosine biosynthesis protein QueC ATY42_08080 PF00270 DEAD/DEAH box helicase ATY42_08080 PF00271 Helicase conserved C-terminal domain ATY42_08080 PF00570 HRDC domain ATY42_08080 PF09382 RQC domain ATY42_08080 PF16124 ATY42_08080 ATY42_08085 PF00210 Ferritin-like domain ATY42_08090 PF00270 DEAD/DEAH box helicase ATY42_08090 PF00271 Helicase conserved C-terminal domain ATY42_08090 PF04408 Helicase associated domain (HA2) ATY42_08090 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ATY42_08090 PF11898 ATY42_08090 ATY42_08095 PF00593 TonB dependent receptor ATY42_08095 PF07715 TonB-dependent Receptor Plug Domain ATY42_08100 PF02685 Glucokinase ATY42_08105 PF02685 Glucokinase ATY42_08110 PF02685 Glucokinase ATY42_08115 PF10142 PhoPQ-activated pathogenicity-related protein ATY42_08120 PF13340 ATY42_08120 ATY42_08125 PF01609 Transposase DDE domain ATY42_08135 PF04055 Radical SAM superfamily ATY42_08135 PF13186 Iron-sulfur cluster-binding domain ATY42_08135 PF13353 4Fe-4S single cluster domain ATY42_08140 PF05402 Coenzyme PQQ synthesis protein D (PqqD) ATY42_08145 PF03070 TENA/THI-4/PQQC family ATY42_08150 PF12706 Beta-lactamase superfamily domain ATY42_08155 PF02824 TGS domain ATY42_08155 PF04607 Region found in RelA / SpoT proteins ATY42_08155 PF13291 ACT domain ATY42_08155 PF13328 HD domain ATY42_08165 PF00535 Glycosyl transferase family 2 ATY42_08165 PF13692 Glycosyl transferases group 1 ATY42_08170 PF00905 Penicillin binding protein transpeptidase domain ATY42_08170 PF00912 Transglycosylase ATY42_08170 PF14814 Bifunctional transglycosylase second domain ATY42_08180 PF13307 Helicase C-terminal domain ATY42_08185 PF00814 Glycoprotease family ATY42_08190 PF03747 ADP-ribosylglycohydrolase ATY42_08195 PF03544 Gram-negative bacterial TonB protein C-terminal ATY42_08200 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ATY42_08200 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ATY42_08205 PF00072 Response regulator receiver domain ATY42_08210 PF00072 Response regulator receiver domain ATY42_08215 PF01584 CheW-like domain ATY42_08220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY42_08225 PF00072 Response regulator receiver domain ATY42_08225 PF01584 CheW-like domain ATY42_08225 PF01627 Hpt domain ATY42_08225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_08225 PF02895 Signal transducing histidine kinase, homodimeric domain ATY42_08230 PF01339 CheB methylesterase ATY42_08235 PF01584 CheW-like domain ATY42_08240 PF13302 Acetyltransferase (GNAT) domain ATY42_08245 PF13358 DDE superfamily endonuclease ATY42_08245 PF13518 Helix-turn-helix domain ATY42_08250 PF12034 ATY42_08250 ATY42_08255 PF00092 von Willebrand factor type A domain ATY42_08255 PF12450 ATY42_08255 ATY42_08260 PF12760 Transposase zinc-ribbon domain ATY42_08265 PF12762 ATY42_08265 ATY42_08270 PF01112 Asparaginase ATY42_08275 PF03932 CutC family ATY42_08280 PF00560 Leucine Rich Repeat ATY42_08285 PF13088 BNR repeat-like domain ATY42_08300 PF01610 ATY42_08300 ATY42_08300 PF13542 ATY42_08300 ATY42_08320 PF01301 Glycosyl hydrolases family 35 ATY42_08325 PF07971 Glycosyl hydrolase family 92 ATY42_08330 PF06824 Protein of unknown function (DUF1237) ATY42_08335 PF13533 Biotin-lipoyl like ATY42_08350 PF13437 HlyD family secretion protein ATY42_08375 PF01610 ATY42_08375 ATY42_08375 PF13542 ATY42_08375 ATY42_08380 PF00005 ABC transporter ATY42_08380 PF00664 ABC transporter transmembrane region ATY42_08380 PF03412 Peptidase C39 family ATY42_08385 PF00933 Glycosyl hydrolase family 3 N terminal domain ATY42_08385 PF01915 Glycosyl hydrolase family 3 C-terminal domain ATY42_08385 PF07691 PA14 domain ATY42_08385 PF14310 Fibronectin type III-like domain ATY42_08390 PF00703 Glycosyl hydrolases family 2 ATY42_08395 PF00728 Glycosyl hydrolase family 20, catalytic domain ATY42_08395 PF02838 Glycosyl hydrolase family 20, domain 2 ATY42_08395 PF13290 ATY42_08395 ATY42_08400 PF00704 Glycosyl hydrolases family 18 ATY42_08405 PF01120 Alpha-L-fucosidase ATY42_08405 PF16757 ATY42_08405 ATY42_08410 PF00593 TonB dependent receptor ATY42_08410 PF07715 TonB-dependent Receptor Plug Domain ATY42_08415 PF02685 Glucokinase ATY42_08420 PF04452 RNA methyltransferase ATY42_08425 PF00202 Aminotransferase class-III ATY42_08435 PF00459 Inositol monophosphatase family ATY42_08440 PF03819 MazG nucleotide pyrophosphohydrolase domain ATY42_08450 PF01145 SPFH domain / Band 7 family ATY42_08450 PF16200 ATY42_08450 ATY42_08460 PF01571 Aminomethyltransferase folate-binding domain ATY42_08460 PF08669 Glycine cleavage T-protein C-terminal barrel domain ATY42_08465 PF01597 Glycine cleavage H-protein ATY42_08475 PF00144 Beta-lactamase ATY42_08485 PF06993 ATY42_08485 ATY42_08490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATY42_08490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATY42_08490 PF09317 ATY42_08490 ATY42_08495 PF12697 Alpha/beta hydrolase family ATY42_08500 PF00440 Bacterial regulatory proteins, tetR family ATY42_08505 PF00593 TonB dependent receptor ATY42_08505 PF07715 TonB-dependent Receptor Plug Domain ATY42_08515 PF01430 Hsp33 protein ATY42_08520 PF00912 Transglycosylase ATY42_08525 PF00535 Glycosyl transferase family 2 ATY42_08530 PF00571 CBS domain ATY42_08535 PF05170 ATY42_08535 ATY42_08540 PF03006 ATY42_08540 ATY42_08545 PF00009 Elongation factor Tu GTP binding domain ATY42_08545 PF16658 ATY42_08545 ATY42_08550 PF01551 Peptidase family M23 ATY42_08555 PF00561 alpha/beta hydrolase fold ATY42_08560 PF01053 Cys/Met metabolism PLP-dependent enzyme ATY42_08570 PF03313 ATY42_08570 ATY42_08570 PF03315 Serine dehydratase beta chain ATY42_08575 PF05768 Glutaredoxin-like domain (DUF836) ATY42_08580 PF04264 YceI-like domain ATY42_08585 PF01292 Prokaryotic cytochrome b561 ATY42_08590 PF04264 YceI-like domain ATY42_08595 PF00072 Response regulator receiver domain ATY42_08595 PF00512 His Kinase A (phospho-acceptor) domain ATY42_08595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_08595 PF07494 Two component regulator propeller ATY42_08595 PF07495 Y_Y_Y domain ATY42_08600 PF00072 Response regulator receiver domain ATY42_08600 PF00512 His Kinase A (phospho-acceptor) domain ATY42_08600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_08600 PF07494 Two component regulator propeller ATY42_08600 PF07495 Y_Y_Y domain ATY42_08605 PF00072 Response regulator receiver domain ATY42_08605 PF00512 His Kinase A (phospho-acceptor) domain ATY42_08605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_08605 PF07494 Two component regulator propeller ATY42_08605 PF07495 Y_Y_Y domain ATY42_08625 PF00754 F5/8 type C domain ATY42_08625 PF01120 Alpha-L-fucosidase ATY42_08635 PF16355 ATY42_08635 ATY42_08640 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ATY42_08640 PF07745 Glycosyl hydrolase family 53 ATY42_08645 PF00593 TonB dependent receptor ATY42_08650 PF07715 TonB-dependent Receptor Plug Domain ATY42_08655 PF06114 Domain of unknown function (DUF955) ATY42_08655 PF09856 ATY42_08655 ATY42_08655 PF13560 Helix-turn-helix domain ATY42_08660 PF00171 Aldehyde dehydrogenase family ATY42_08665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATY42_08665 PF02770 Acyl-CoA dehydrogenase, middle domain ATY42_08665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATY42_08670 PF00378 Enoyl-CoA hydratase/isomerase family ATY42_08675 PF16113 ATY42_08675 ATY42_08680 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ATY42_08680 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ATY42_08685 PF01545 Cation efflux family ATY42_08690 PF00378 Enoyl-CoA hydratase/isomerase family ATY42_08690 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ATY42_08690 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ATY42_08695 PF04542 Sigma-70 region 2 ATY42_08695 PF08281 Sigma-70, region 4 ATY42_08700 PF03872 Anti sigma-E protein RseA, N-terminal domain ATY42_08705 PF13180 PDZ domain ATY42_08705 PF13365 Trypsin-like peptidase domain ATY42_08710 PF00009 Elongation factor Tu GTP binding domain ATY42_08710 PF00679 Elongation factor G C-terminus ATY42_08710 PF03144 Elongation factor Tu domain 2 ATY42_08710 PF06421 GTP-binding protein LepA C-terminus ATY42_08715 PF00717 Peptidase S24-like ATY42_08720 PF16137 ATY42_08720 ATY42_08725 PF00035 Double-stranded RNA binding motif ATY42_08725 PF14622 Ribonuclease-III-like ATY42_08730 PF01926 50S ribosome-binding GTPase ATY42_08730 PF07650 KH domain ATY42_08735 PF02565 Recombination protein O C terminal ATY42_08735 PF11967 Recombination protein O N terminal ATY42_08740 PF00072 Response regulator receiver domain ATY42_08740 PF01627 Hpt domain ATY42_08745 PF05958 tRNA (Uracil-5-)-methyltransferase ATY42_08750 PF01928 CYTH domain ATY42_08755 PF01610 ATY42_08755 ATY42_08755 PF13542 ATY42_08755 ATY42_08760 PF01609 Transposase DDE domain ATY42_08760 PF05598 ATY42_08760 ATY42_08765 PF01323 DSBA-like thioredoxin domain ATY42_08770 PF13450 NAD(P)-binding Rossmann-like domain ATY42_08775 PF04244 Deoxyribodipyrimidine photo-lyase-related protein ATY42_08780 PF00933 Glycosyl hydrolase family 3 N terminal domain ATY42_08785 PF00156 Phosphoribosyl transferase domain ATY42_08790 PF01048 Phosphorylase superfamily ATY42_08795 PF00313 'Cold-shock' DNA-binding domain ATY42_08810 PF01494 FAD binding domain ATY42_08815 PF00149 Calcineurin-like phosphoesterase ATY42_08820 PF00270 DEAD/DEAH box helicase ATY42_08820 PF00271 Helicase conserved C-terminal domain ATY42_08820 PF08494 ATY42_08820 ATY42_08825 PF01068 ATP dependent DNA ligase domain ATY42_08825 PF04675 DNA ligase N terminus ATY42_08825 PF04679 ATP dependent DNA ligase C terminal region ATY42_08845 PF04519 ATY42_08845 ATY42_08850 PF00990 GGDEF domain ATY42_08850 PF05227 CHASE3 domain ATY42_08865 PF00108 Thiolase, N-terminal domain ATY42_08865 PF02803 Thiolase, C-terminal domain ATY42_08870 PF00082 Subtilase family ATY42_08870 PF03797 Autotransporter beta-domain ATY42_08870 PF12951 ATY42_08870 ATY42_08875 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ATY42_08875 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ATY42_08880 PF01863 Protein of unknown function DUF45 ATY42_08885 PF10982 Protein of unknown function (DUF2789) ATY42_08890 PF01258 Prokaryotic dksA/traR C4-type zinc finger ATY42_08895 PF00924 Mechanosensitive ion channel ATY42_08900 PF01609 Transposase DDE domain ATY42_08910 PF13546 ATY42_08910 ATY42_08920 PF00012 Hsp70 protein ATY42_08925 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATY42_08930 PF01610 ATY42_08930 ATY42_08930 PF13542 ATY42_08930 ATY42_08935 PF01545 Cation efflux family ATY42_08940 PF03831 PhnA protein ATY42_08940 PF08274 PhnA Zinc-Ribbon ATY42_08950 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ATY42_08955 PF07690 Major Facilitator Superfamily ATY42_08960 PF01609 Transposase DDE domain ATY42_08970 PF09537 Domain of unknown function (DUF2383) ATY42_08975 PF13563 2'-5' RNA ligase superfamily ATY42_08985 PF09791 ATY42_08985 ATY42_08990 PF06057 Bacterial virulence protein (VirJ) ATY42_08995 PF13586 ATY42_08995 ATY42_09005 PF03706 ATY42_09005 ATY42_09005 PF09924 Uncharacterized conserved protein (DUF2156) ATY42_09010 PF06197 ATY42_09010 ATY42_09015 PF01042 Endoribonuclease L-PSP ATY42_09020 PF02353 Mycolic acid cyclopropane synthetase ATY42_09025 PF06966 ATY42_09025 ATY42_09030 PF11086 ATY42_09030 ATY42_09035 PF02353 Mycolic acid cyclopropane synthetase ATY42_09040 PF07103 ATY42_09040 ATY42_09045 PF01593 Flavin containing amine oxidoreductase ATY42_09050 PF00487 ATY42_09050 ATY42_09055 PF10099 ATY42_09055 ATY42_09060 PF04542 Sigma-70 region 2 ATY42_09060 PF08281 Sigma-70, region 4 ATY42_09080 PF04060 Putative Fe-S cluster ATY42_09080 PF14697 4Fe-4S dicluster domain ATY42_09085 PF12710 haloacid dehalogenase-like hydrolase ATY42_09090 PF01588 Putative tRNA binding domain ATY42_09090 PF09334 tRNA synthetases class I (M) ATY42_09095 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) ATY42_09105 PF13358 DDE superfamily endonuclease ATY42_09105 PF13551 Winged helix-turn helix ATY42_09105 PF13592 ATY42_09105 ATY42_09110 PF00324 Amino acid permease ATY42_09115 PF02574 Homocysteine S-methyltransferase ATY42_09120 PF05960 Bacterial protein of unknown function (DUF885) ATY42_09125 PF02592 ATY42_09125 ATY42_09130 PF04367 ATY42_09130 ATY42_09140 PF01609 Transposase DDE domain ATY42_09140 PF05598 ATY42_09140 ATY42_09145 PF08845 ATY42_09145 ATY42_09150 PF05598 ATY42_09150 ATY42_09170 PF05598 ATY42_09170 ATY42_09180 PF06850 ATY42_09180 ATY42_09190 PF03653 ATY42_09190 ATY42_09205 PF12040 ATY42_09205 ATY42_09205 PF12679 ATY42_09205 ATY42_09210 PF12040 ATY42_09210 ATY42_09215 PF00005 ABC transporter ATY42_09220 PF00593 TonB dependent receptor ATY42_09220 PF07715 TonB-dependent Receptor Plug Domain ATY42_09225 PF05598 ATY42_09225 ATY42_09230 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ATY42_09235 PF01336 OB-fold nucleic acid binding domain ATY42_09235 PF02811 PHP domain ATY42_09235 PF07733 Bacterial DNA polymerase III alpha subunit ATY42_09235 PF14579 Helix-hairpin-helix motif ATY42_09240 PF01351 Ribonuclease HII ATY42_09245 PF02684 ATY42_09245 ATY42_09250 PF00132 Bacterial transferase hexapeptide (six repeats) ATY42_09250 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ATY42_09255 PF07977 FabA-like domain ATY42_09260 PF00132 Bacterial transferase hexapeptide (six repeats) ATY42_09260 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ATY42_09265 PF01103 Surface antigen ATY42_09265 PF07244 Surface antigen variable number repeat ATY42_09270 PF02163 Peptidase family M50 ATY42_09275 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ATY42_09275 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal ATY42_09275 PF13288 DXP reductoisomerase C-terminal domain ATY42_09280 PF01148 Cytidylyltransferase family ATY42_09285 PF01255 Putative undecaprenyl diphosphate synthase ATY42_09290 PF01765 Ribosome recycling factor ATY42_09295 PF00696 Amino acid kinase family ATY42_09300 PF08668 HDOD domain ATY42_09305 PF00889 Elongation factor TS ATY42_09310 PF00318 Ribosomal protein S2 ATY42_09315 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ATY42_09325 PF05229 ATY42_09325 ATY42_09330 PF00577 Outer membrane usher protein ATY42_09330 PF13953 PapC C-terminal domain ATY42_09335 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ATY42_09340 PF05229 ATY42_09340 ATY42_09345 PF00557 Metallopeptidase family M24 ATY42_09350 PF01909 Nucleotidyltransferase domain ATY42_09350 PF01966 HD domain ATY42_09350 PF08335 GlnD PII-uridylyltransferase ATY42_09355 PF00132 Bacterial transferase hexapeptide (six repeats) ATY42_09355 PF14602 Hexapeptide repeat of succinyl-transferase ATY42_09355 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ATY42_09365 PF03960 ArsC family ATY42_09370 PF13508 Acetyltransferase (GNAT) domain ATY42_09375 PF01546 Peptidase family M20/M25/M40 ATY42_09375 PF07687 Peptidase dimerisation domain ATY42_09380 PF00733 Asparagine synthase ATY42_09380 PF13537 Glutamine amidotransferase domain ATY42_09385 PF13229 Right handed beta helix region ATY42_09395 PF00593 TonB dependent receptor ATY42_09395 PF07715 TonB-dependent Receptor Plug Domain ATY42_09400 PF01804 Penicillin amidase ATY42_09405 PF00210 Ferritin-like domain ATY42_09410 PF00521 DNA gyrase/topoisomerase IV, subunit A ATY42_09410 PF03989 DNA gyrase C-terminal domain, beta-propeller ATY42_09420 PF01047 MarR family ATY42_09425 PF02321 Outer membrane efflux protein ATY42_09430 PF00529 HlyD family secretion protein ATY42_09430 PF16576 ATY42_09430 ATY42_09435 PF07690 Major Facilitator Superfamily ATY42_09440 PF00144 Beta-lactamase ATY42_09445 PF13586 ATY42_09445 ATY42_09465 PF12760 Transposase zinc-ribbon domain ATY42_09465 PF12762 ATY42_09465 ATY42_09470 PF00665 Integrase core domain ATY42_09475 PF13936 Helix-turn-helix domain ATY42_09485 PF04101 Glycosyltransferase family 28 C-terminal domain ATY42_09490 PF02779 Transketolase, pyrimidine binding domain ATY42_09490 PF02780 Transketolase, C-terminal domain ATY42_09490 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ATY42_09495 PF14279 ATY42_09495 ATY42_09500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATY42_09500 PF02770 Acyl-CoA dehydrogenase, middle domain ATY42_09500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATY42_09500 PF12418 ATY42_09500 ATY42_09500 PF12806 ATY42_09500 ATY42_09505 PF03168 Late embryogenesis abundant protein ATY42_09515 PF00082 Subtilase family ATY42_09520 PF01668 SmpB protein ATY42_09525 PF03364 Polyketide cyclase / dehydrase and lipid transport ATY42_09530 PF03658 RnfH family Ubiquitin ATY42_09535 PF04355 SmpA / OmlA family ATY42_09540 PF01475 Ferric uptake regulator family ATY42_09545 PF02463 RecF/RecN/SMC N terminal domain ATY42_09550 PF01628 HrcA protein C terminal domain ATY42_09550 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding ATY42_09555 PF01025 GrpE ATY42_09560 PF00012 Hsp70 protein ATY42_09565 PF00226 DnaJ domain ATY42_09565 PF00684 DnaJ central domain ATY42_09565 PF01556 DnaJ C terminal domain ATY42_09570 PF08543 Phosphomethylpyrimidine kinase ATY42_09575 PF01842 ACT domain ATY42_09575 PF02153 Prephenate dehydrogenase ATY42_09580 PF13546 ATY42_09580 ATY42_09585 PF02321 Outer membrane efflux protein ATY42_09590 PF03466 LysR substrate binding domain ATY42_09595 PF00005 ABC transporter ATY42_09595 PF00664 ABC transporter transmembrane region ATY42_09600 PF01205 Uncharacterized protein family UPF0029 ATY42_09600 PF09186 Domain of unknown function (DUF1949) ATY42_09605 PF03641 Possible lysine decarboxylase ATY42_09610 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ATY42_09610 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY42_09615 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ATY42_09615 PF00364 Biotin-requiring enzyme ATY42_09615 PF02817 e3 binding domain ATY42_09620 PF00676 Dehydrogenase E1 component ATY42_09620 PF02779 Transketolase, pyrimidine binding domain ATY42_09620 PF16078 ATY42_09620 ATY42_09620 PF16870 ATY42_09620 ATY42_09625 PF13673 Acetyltransferase (GNAT) domain ATY42_09630 PF08007 Cupin superfamily protein ATY42_09635 PF13180 PDZ domain ATY42_09640 PF11259 ATY42_09640 ATY42_09645 PF00206 Lyase ATY42_09645 PF08328 Adenylosuccinate lyase C-terminal ATY42_09660 PF13358 DDE superfamily endonuclease ATY42_09660 PF13551 Winged helix-turn helix ATY42_09660 PF13592 ATY42_09660 ATY42_09665 PF13340 ATY42_09665 ATY42_09670 PF13586 ATY42_09670 ATY42_09675 PF00665 Integrase core domain ATY42_09680 PF13936 Helix-turn-helix domain ATY42_09685 PF00206 Lyase ATY42_09685 PF10415 Fumarase C C-terminus ATY42_09705 PF13349 ATY42_09705 ATY42_09715 PF00005 ABC transporter ATY42_09720 PF00392 Bacterial regulatory proteins, gntR family ATY42_09725 PF00255 Glutathione peroxidase ATY42_09730 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATY42_09730 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ATY42_09735 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ATY42_09735 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ATY42_09735 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ATY42_09740 PF04102 SlyX ATY42_09745 PF09831 ATY42_09745 ATY42_09750 PF13557 ATY42_09750 ATY42_09755 PF00356 Bacterial regulatory proteins, lacI family ATY42_09755 PF13377 Periplasmic binding protein-like domain ATY42_09760 PF07690 Major Facilitator Superfamily ATY42_09765 PF00294 pfkB family carbohydrate kinase ATY42_09770 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) ATY42_09775 PF00809 Pterin binding enzyme ATY42_09775 PF02310 B12 binding domain ATY42_09775 PF02607 B12 binding domain ATY42_09775 PF02965 Vitamin B12 dependent methionine synthase, activation domain ATY42_09780 PF02574 Homocysteine S-methyltransferase ATY42_09785 PF01022 Bacterial regulatory protein, arsR family ATY42_09785 PF08241 Methyltransferase domain ATY42_09790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATY42_09790 PF02770 Acyl-CoA dehydrogenase, middle domain ATY42_09790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATY42_09800 PF13472 GDSL-like Lipase/Acylhydrolase family ATY42_09810 PF00575 S1 RNA binding domain ATY42_09810 PF00773 RNB domain ATY42_09810 PF08206 Ribonuclease B OB domain ATY42_09815 PF01609 Transposase DDE domain ATY42_09820 PF13340 ATY42_09820 ATY42_09825 PF04828 Glutathione-dependent formaldehyde-activating enzyme ATY42_09830 PF00588 SpoU rRNA Methylase family ATY42_09830 PF08032 RNA 2'-O ribose methyltransferase substrate binding ATY42_09840 PF01609 Transposase DDE domain ATY42_09840 PF05598 ATY42_09840 ATY42_09845 PF13546 ATY42_09845 ATY42_09850 PF12760 Transposase zinc-ribbon domain ATY42_09850 PF12762 ATY42_09850 ATY42_09855 PF00872 ATY42_09855 ATY42_09860 PF05598 ATY42_09860 ATY42_09865 PF00313 'Cold-shock' DNA-binding domain ATY42_09870 PF00561 alpha/beta hydrolase fold ATY42_09875 PF13546 ATY42_09875 ATY42_09880 PF01609 Transposase DDE domain ATY42_09880 PF05598 ATY42_09880 ATY42_09885 PF13546 ATY42_09885 ATY42_09890 PF01609 Transposase DDE domain ATY42_09890 PF05598 ATY42_09890 ATY42_09895 PF13546 ATY42_09895 ATY42_09900 PF01609 Transposase DDE domain ATY42_09905 PF12760 Transposase zinc-ribbon domain ATY42_09905 PF12762 ATY42_09905 ATY42_09910 PF01609 Transposase DDE domain ATY42_09920 PF01609 Transposase DDE domain ATY42_09925 PF12760 Transposase zinc-ribbon domain ATY42_09925 PF12762 ATY42_09925 ATY42_09930 PF01609 Transposase DDE domain ATY42_09935 PF01609 Transposase DDE domain ATY42_09935 PF05598 ATY42_09935 ATY42_09940 PF13546 ATY42_09940 ATY42_09945 PF05598 ATY42_09945 ATY42_09950 PF13276 ATY42_09950 ATY42_09950 PF13683 ATY42_09950 ATY42_09955 PF01527 Transposase ATY42_09960 PF03544 Gram-negative bacterial TonB protein C-terminal ATY42_09965 PF03544 Gram-negative bacterial TonB protein C-terminal ATY42_09970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ATY42_09970 PF02403 Seryl-tRNA synthetase N-terminal domain ATY42_09975 PF01609 Transposase DDE domain ATY42_09980 PF13546 ATY42_09980 ATY42_09985 PF01609 Transposase DDE domain ATY42_09985 PF05598 ATY42_09985 ATY42_09990 PF02525 Flavodoxin-like fold ATY42_09995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY42_09995 PF03466 LysR substrate binding domain ATY42_10010 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY42_10025 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY42_10040 PF05598 ATY42_10040 ATY42_10045 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY42_10050 PF13546 ATY42_10050 ATY42_10060 PF01650 Peptidase C13 family ATY42_10070 PF03079 ARD/ARD' family ATY42_10075 PF00596 Class II Aldolase and Adducin N-terminal domain ATY42_10080 PF13520 Amino acid permease ATY42_10085 PF13520 Amino acid permease ATY42_10090 PF00293 NUDIX domain ATY42_10095 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ATY42_10095 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATY42_10100 PF01565 FAD binding domain ATY42_10100 PF02913 FAD linked oxidases, C-terminal domain ATY42_10105 PF09498 ATY42_10105 ATY42_10110 PF13387 ATY42_10110 ATY42_10115 PF13683 ATY42_10115 ATY42_10120 PF13432 Tetratricopeptide repeat ATY42_10125 PF03918 Cytochrome C biogenesis protein ATY42_10130 PF08534 Redoxin ATY42_10135 PF01578 ATY42_10135 ATY42_10135 PF16327 ATY42_10135 ATY42_10140 PF03100 CcmE ATY42_10145 PF04995 ATY42_10145 ATY42_10150 PF01578 ATY42_10150 ATY42_10155 PF03379 ATY42_10155 ATY42_10160 PF00005 ABC transporter ATY42_10165 PF00155 Aminotransferase class I and II ATY42_10170 PF00795 Carbon-nitrogen hydrolase ATY42_10175 PF12760 Transposase zinc-ribbon domain ATY42_10175 PF12762 ATY42_10175 ATY42_10180 PF05096 Glutamine cyclotransferase ATY42_10190 PF00849 RNA pseudouridylate synthase ATY42_10190 PF01479 S4 domain ATY42_10195 PF04079 Putative transcriptional regulators (Ypuh-like) ATY42_10200 PF02616 ScpA/B protein ATY42_10205 PF03795 YCII-related domain ATY42_10210 PF01722 BolA-like protein ATY42_10215 PF00356 Bacterial regulatory proteins, lacI family ATY42_10215 PF13377 Periplasmic binding protein-like domain ATY42_10220 PF00593 TonB dependent receptor ATY42_10220 PF07715 TonB-dependent Receptor Plug Domain ATY42_10225 PF10091 Putative glucoamylase ATY42_10230 PF13416 Bacterial extracellular solute-binding protein ATY42_10235 PF00528 Binding-protein-dependent transport system inner membrane component ATY42_10240 PF00528 Binding-protein-dependent transport system inner membrane component ATY42_10245 PF00754 F5/8 type C domain ATY42_10245 PF06202 Amylo-alpha-1,6-glucosidase ATY42_10255 PF01963 ATY42_10255 ATY42_10260 PF13420 Acetyltransferase (GNAT) domain ATY42_10265 PF00795 Carbon-nitrogen hydrolase ATY42_10270 PF04371 Porphyromonas-type peptidyl-arginine deiminase ATY42_10280 PF00444 Ribosomal protein L36 ATY42_10285 PF02224 Cytidylate kinase ATY42_10290 PF00575 S1 RNA binding domain ATY42_10295 PF00216 Bacterial DNA-binding protein ATY42_10300 PF06305 ATY42_10300 ATY42_10305 PF13432 Tetratricopeptide repeat ATY42_10310 PF00953 Glycosyl transferase family 4 ATY42_10315 PF02719 Polysaccharide biosynthesis protein ATY42_10315 PF13727 CoA-binding domain ATY42_10320 PF00483 Nucleotidyl transferase ATY42_10325 PF00999 Sodium/hydrogen exchanger family ATY42_10345 PF01609 Transposase DDE domain ATY42_10355 PF06844 Protein of unknown function (DUF1244) ATY42_10360 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ATY42_10360 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ATY42_10365 PF00478 IMP dehydrogenase / GMP reductase domain ATY42_10365 PF00571 CBS domain ATY42_10370 PF00117 Glutamine amidotransferase class-I ATY42_10370 PF00958 GMP synthase C terminal domain ATY42_10370 PF02540 NAD synthase ATY42_10375 PF10070 ATY42_10375 ATY42_10380 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains ATY42_10380 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ATY42_10385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY42_10385 PF03466 LysR substrate binding domain ATY42_10400 PF03601 ATY42_10400 ATY42_10405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY42_10410 PF03466 LysR substrate binding domain ATY42_10420 PF17201 ATY42_10420 ATY42_10425 PF01566 ATY42_10425 ATY42_10430 PF01325 Iron dependent repressor, N-terminal DNA binding domain ATY42_10430 PF02742 Iron dependent repressor, metal binding and dimerisation domain ATY42_10435 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ATY42_10440 PF00929 Exonuclease ATY42_10445 PF00924 Mechanosensitive ion channel ATY42_10450 PF00391 PEP-utilising enzyme, mobile domain ATY42_10450 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ATY42_10450 PF02896 PEP-utilising enzyme, TIM barrel domain ATY42_10455 PF03618 ATY42_10455 ATY42_10460 PF06853 ATY42_10460 ATY42_10465 PF00293 NUDIX domain ATY42_10480 PF13546 ATY42_10480 ATY42_10485 PF13561 Enoyl-(Acyl carrier protein) reductase ATY42_10490 PF01066 CDP-alcohol phosphatidyltransferase ATY42_10495 PF09712 ATY42_10495 ATY42_10500 PF00561 alpha/beta hydrolase fold ATY42_10505 PF04024 ATY42_10505 ATY42_10515 PF01266 FAD dependent oxidoreductase ATY42_10525 PF00575 S1 RNA binding domain ATY42_10525 PF09371 Tex-like protein N-terminal domain ATY42_10525 PF12836 Helix-hairpin-helix motif ATY42_10525 PF16921 ATY42_10525 ATY42_10535 PF00072 Response regulator receiver domain ATY42_10535 PF02954 Bacterial regulatory protein, Fis family ATY42_10540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_10545 PF04551 GcpE protein ATY42_10550 PF01569 PAP2 superfamily ATY42_10555 PF13546 ATY42_10555 ATY42_10560 PF07690 Major Facilitator Superfamily ATY42_10565 PF00665 Integrase core domain ATY42_10565 PF13936 Helix-turn-helix domain ATY42_10575 PF00892 EamA-like transporter family ATY42_10580 PF01565 FAD binding domain ATY42_10580 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ATY42_10585 PF01180 Dihydroorotate dehydrogenase ATY42_10590 PF08241 Methyltransferase domain ATY42_10595 PF13828 ATY42_10595 ATY42_10600 PF00171 Aldehyde dehydrogenase family ATY42_10610 PF03073 TspO/MBR family ATY42_10615 PF00696 Amino acid kinase family ATY42_10615 PF00742 Homoserine dehydrogenase ATY42_10615 PF03447 Homoserine dehydrogenase, NAD binding domain ATY42_10615 PF13840 ACT domain ATY42_10620 PF00288 GHMP kinases N terminal domain ATY42_10620 PF08544 GHMP kinases C terminal ATY42_10630 PF07110 EthD domain ATY42_10635 PF00291 Pyridoxal-phosphate dependent enzyme ATY42_10635 PF14821 Threonine synthase N terminus ATY42_10640 PF13645 ATY42_10640 ATY42_10650 PF03129 Anticodon binding domain ATY42_10650 PF13393 Histidyl-tRNA synthetase ATY42_10655 PF01609 Transposase DDE domain ATY42_10660 PF01371 Trp repressor protein ATY42_10665 PF01634 ATP phosphoribosyltransferase ATY42_10665 PF08029 HisG, C-terminal domain ATY42_10670 PF00815 Histidinol dehydrogenase ATY42_10675 PF00155 Aminotransferase class I and II ATY42_10680 PF00475 Imidazoleglycerol-phosphate dehydratase ATY42_10680 PF13242 HAD-hyrolase-like ATY42_10685 PF00117 Glutamine amidotransferase class-I ATY42_10690 PF00977 Histidine biosynthesis protein ATY42_10695 PF00977 Histidine biosynthesis protein ATY42_10700 PF01502 Phosphoribosyl-AMP cyclohydrolase ATY42_10700 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ATY42_10705 PF16371 ATY42_10705 ATY42_10710 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY42_10725 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY42_10730 PF16380 ATY42_10730 ATY42_10745 PF02486 ATY42_10745 ATY42_10750 PF02303 Helix-destabilising protein ATY42_10770 PF10734 ATY42_10770 ATY42_10775 PF05707 Zonular occludens toxin (Zot) ATY42_10790 PF05857 ATY42_10790 ATY42_10795 PF05707 Zonular occludens toxin (Zot) ATY42_10800 PF10734 ATY42_10800 ATY42_10810 PF10389 Bacteriophage coat protein B ATY42_10820 PF02303 Helix-destabilising protein ATY42_10825 PF11726 ATY42_10825 ATY42_10850 PF13340 ATY42_10850 ATY42_10855 PF13586 ATY42_10855 ATY42_10860 PF01609 Transposase DDE domain ATY42_10860 PF05598 ATY42_10860 ATY42_10875 PF13340 ATY42_10875 ATY42_10880 PF13586 ATY42_10880 ATY42_10885 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY42_10900 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY42_10905 PF13340 ATY42_10905 ATY42_10910 PF13586 ATY42_10910 ATY42_10925 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY42_10940 PF13936 Helix-turn-helix domain ATY42_10950 PF13936 Helix-turn-helix domain ATY42_10955 PF01609 Transposase DDE domain ATY42_10955 PF05598 ATY42_10955 ATY42_10960 PF12760 Transposase zinc-ribbon domain ATY42_10960 PF12762 ATY42_10960 ATY42_10965 PF05593 ATY42_10965 ATY42_10970 PF00872 ATY42_10970 ATY42_10975 PF00665 Integrase core domain ATY42_10980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ATY42_11000 PF01066 CDP-alcohol phosphatidyltransferase ATY42_11005 PF01541 GIY-YIG catalytic domain ATY42_11005 PF02151 UvrB/uvrC motif ATY42_11005 PF08459 UvrC Helix-hairpin-helix N-terminal ATY42_11010 PF01436 NHL repeat ATY42_11015 PF01451 Low molecular weight phosphotyrosine protein phosphatase ATY42_11020 PF02348 Cytidylyltransferase ATY42_11025 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ATY42_11030 PF00005 ABC transporter ATY42_11030 PF00664 ABC transporter transmembrane region ATY42_11035 PF02472 Biopolymer transport protein ExbD/TolR ATY42_11040 PF01618 ATY42_11040 ATY42_11045 PF00753 Metallo-beta-lactamase superfamily ATY42_11045 PF03772 ATY42_11045 ATY42_11045 PF13567 ATY42_11045 ATY42_11050 PF12760 Transposase zinc-ribbon domain ATY42_11050 PF12762 ATY42_11050 ATY42_11060 PF00005 ABC transporter ATY42_11065 PF02687 ATY42_11065 ATY42_11065 PF12704 MacB-like periplasmic core domain ATY42_11075 PF03937 Flavinator of succinate dehydrogenase ATY42_11080 PF13085 2Fe-2S iron-sulfur cluster binding domain ATY42_11080 PF13534 4Fe-4S dicluster domain ATY42_11090 PF00890 FAD binding domain ATY42_11090 PF02910 Fumarate reductase flavoprotein C-term ATY42_11095 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ATY42_11100 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ATY42_11105 PF01571 Aminomethyltransferase folate-binding domain ATY42_11105 PF08669 Glycine cleavage T-protein C-terminal barrel domain ATY42_11110 PF00005 ABC transporter ATY42_11110 PF08402 TOBE domain ATY42_11115 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ATY42_11115 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ATY42_11120 PF02685 Glucokinase ATY42_11125 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ATY42_11130 PF00920 Dehydratase family ATY42_11135 PF01081 KDPG and KHG aldolase ATY42_11140 PF05598 ATY42_11140 ATY42_11145 PF01609 Transposase DDE domain ATY42_11165 PF00072 Response regulator receiver domain ATY42_11170 PF00072 Response regulator receiver domain ATY42_11170 PF00512 His Kinase A (phospho-acceptor) domain ATY42_11170 PF01590 GAF domain ATY42_11170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_11170 PF08447 PAS fold ATY42_11170 PF08448 PAS fold ATY42_11170 PF13185 GAF domain ATY42_11175 PF13358 DDE superfamily endonuclease ATY42_11175 PF13592 ATY42_11175 ATY42_11180 PF13340 ATY42_11180 ATY42_11185 PF13586 ATY42_11185 ATY42_11200 PF00990 GGDEF domain ATY42_11220 PF13358 DDE superfamily endonuclease ATY42_11225 PF13518 Helix-turn-helix domain ATY42_11230 PF02253 Phospholipase A1 ATY42_11235 PF13410 Glutathione S-transferase, C-terminal domain ATY42_11240 PF05681 ATY42_11240 ATY42_11240 PF05683 Fumarase C-terminus ATY42_11245 PF00005 ABC transporter ATY42_11250 PF00175 Oxidoreductase NAD-binding domain ATY42_11250 PF00970 Oxidoreductase FAD-binding domain ATY42_11255 PF00255 Glutathione peroxidase ATY42_11265 PF08279 HTH domain ATY42_11275 PF00082 Subtilase family ATY42_11280 PF04542 Sigma-70 region 2 ATY42_11280 PF08281 Sigma-70, region 4 ATY42_11290 PF01047 MarR family ATY42_11300 PF14542 GCN5-related N-acetyl-transferase ATY42_11310 PF01694 Rhomboid family ATY42_11315 PF00854 POT family ATY42_11320 PF00246 Zinc carboxypeptidase ATY42_11325 PF00933 Glycosyl hydrolase family 3 N terminal domain ATY42_11325 PF01915 Glycosyl hydrolase family 3 C-terminal domain ATY42_11325 PF14310 Fibronectin type III-like domain ATY42_11340 PF00563 EAL domain ATY42_11340 PF00990 GGDEF domain ATY42_11340 PF01590 GAF domain ATY42_11345 PF00474 Sodium:solute symporter family ATY42_11350 PF00933 Glycosyl hydrolase family 3 N terminal domain ATY42_11350 PF01915 Glycosyl hydrolase family 3 C-terminal domain ATY42_11355 PF05787 Bacterial protein of unknown function (DUF839) ATY42_11365 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system ATY42_11370 PF00342 Phosphoglucose isomerase ATY42_11375 PF02261 Aspartate decarboxylase ATY42_11380 PF02569 Pantoate-beta-alanine ligase ATY42_11385 PF02548 Ketopantoate hydroxymethyltransferase ATY42_11390 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ATY42_11395 PF01743 Poly A polymerase head domain ATY42_11395 PF12626 Polymerase A arginine-rich C-terminus ATY42_11395 PF12627 Probable RNA and SrmB- binding site of polymerase A ATY42_11405 PF02649 Type I GTP cyclohydrolase folE2 ATY42_11410 PF01520 N-acetylmuramoyl-L-alanine amidase ATY42_11410 PF11741 AMIN domain ATY42_11415 PF05598 ATY42_11415 ATY42_11430 PF01609 Transposase DDE domain ATY42_11430 PF05598 ATY42_11430 ATY42_11435 PF00082 Subtilase family ATY42_11435 PF03797 Autotransporter beta-domain ATY42_11435 PF12951 ATY42_11435 ATY42_11440 PF16576 ATY42_11440 ATY42_11445 PF00873 AcrB/AcrD/AcrF family ATY42_11450 PF02321 Outer membrane efflux protein ATY42_11455 PF00512 His Kinase A (phospho-acceptor) domain ATY42_11455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_11460 PF00072 Response regulator receiver domain ATY42_11460 PF00196 Bacterial regulatory proteins, luxR family ATY42_11465 PF12951 ATY42_11465 ATY42_11465 PF13018 ATY42_11465 ATY42_11470 PF01527 Transposase ATY42_11475 PF01609 Transposase DDE domain ATY42_11480 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ATY42_11485 PF00800 Prephenate dehydratase ATY42_11485 PF01817 Chorismate mutase type II ATY42_11485 PF01842 ACT domain ATY42_11490 PF00266 Aminotransferase class-V ATY42_11495 PF00174 Oxidoreductase molybdopterin binding domain ATY42_11505 PF01794 ATY42_11505 ATY42_11510 PF16697 ATY42_11510 ATY42_11515 PF09650 ATY42_11515 ATY42_11520 PF05597 ATY42_11520 ATY42_11525 PF04471 Restriction endonuclease ATY42_11530 PF00392 Bacterial regulatory proteins, gntR family ATY42_11530 PF07702 UTRA domain ATY42_11535 PF01979 Amidohydrolase family ATY42_11540 PF07969 Amidohydrolase family ATY42_11545 PF00221 Aromatic amino acid lyase ATY42_11550 PF05013 N-formylglutamate amidohydrolase ATY42_11555 PF01175 Urocanase ATY42_11555 PF17391 ATY42_11555 ATY42_11555 PF17392 ATY42_11555 ATY42_11560 PF01757 ATY42_11560 ATY42_11575 PF01527 Transposase ATY42_11580 PF00521 DNA gyrase/topoisomerase IV, subunit A ATY42_11580 PF03989 DNA gyrase C-terminal domain, beta-propeller ATY42_11585 PF01008 Initiation factor 2 subunit family ATY42_11590 PF11218 ATY42_11590 ATY42_11595 PF00152 tRNA synthetases class II (D, K and N) ATY42_11600 PF00533 BRCA1 C Terminus (BRCT) domain ATY42_11600 PF01653 NAD-dependent DNA ligase adenylation domain ATY42_11600 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ATY42_11600 PF03120 NAD-dependent DNA ligase OB-fold domain ATY42_11600 PF12826 Helix-hairpin-helix motif ATY42_11610 PF04354 ZipA, C-terminal FtsZ-binding domain ATY42_11615 PF02463 RecF/RecN/SMC N terminal domain ATY42_11620 PF01281 Ribosomal protein L9, N-terminal domain ATY42_11620 PF03948 Ribosomal protein L9, C-terminal domain ATY42_11625 PF01084 Ribosomal protein S18 ATY42_11630 PF01250 Ribosomal protein S6 ATY42_11635 PF01521 Iron-sulphur cluster biosynthesis ATY42_11640 PF00152 tRNA synthetases class II (D, K and N) ATY42_11640 PF01336 OB-fold nucleic acid binding domain ATY42_11660 PF04299 Putative FMN-binding domain ATY42_11670 PF00484 Carbonic anhydrase ATY42_11675 PF06052 3-hydroxyanthranilic acid dioxygenase ATY42_11685 PF00266 Aminotransferase class-V ATY42_11690 PF01494 FAD binding domain ATY42_11695 PF00929 Exonuclease ATY42_11695 PF08411 Exonuclease C-terminal ATY42_11700 PF09365 ATY42_11700 ATY42_11705 PF00248 Aldo/keto reductase family ATY42_11710 PF11159 ATY42_11710 ATY42_11715 PF06189 ATY42_11715 ATY42_11720 PF01513 ATP-NAD kinase ATY42_11725 PF01170 Putative RNA methylase family UPF0020 ATY42_11725 PF02926 THUMP domain ATY42_11725 PF10672 S-adenosylmethionine-dependent methyltransferase ATY42_11730 PF00005 ABC transporter ATY42_11735 PF00005 ABC transporter ATY42_11740 PF00005 ABC transporter ATY42_11745 PF00583 Acetyltransferase (GNAT) family ATY42_11750 PF05728 Uncharacterised protein family (UPF0227) ATY42_11755 PF03473 MOSC domain ATY42_11760 PF01510 N-acetylmuramoyl-L-alanine amidase ATY42_11765 PF07920 Protein of unknown function (DUF1684) ATY42_11770 PF00581 Rhodanese-like domain ATY42_11775 PF00293 NUDIX domain ATY42_11775 PF06945 ATY42_11775 ATY42_11780 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATY42_11780 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ATY42_11785 PF00378 Enoyl-CoA hydratase/isomerase family ATY42_11795 PF00633 Helix-hairpin-helix motif ATY42_11795 PF00730 HhH-GPD superfamily base excision DNA repair protein ATY42_11805 PF00484 Carbonic anhydrase ATY42_11810 PF01609 Transposase DDE domain ATY42_11810 PF05598 ATY42_11810 ATY42_11815 PF13586 ATY42_11815 ATY42_11820 PF01610 ATY42_11820 ATY42_11820 PF13542 ATY42_11820 ATY42_11825 PF13340 ATY42_11825 ATY42_11835 PF07396 Phosphate-selective porin O and P ATY42_11840 PF12849 PBP superfamily domain ATY42_11845 PF12849 PBP superfamily domain ATY42_11850 PF00528 Binding-protein-dependent transport system inner membrane component ATY42_11855 PF00528 Binding-protein-dependent transport system inner membrane component ATY42_11860 PF00005 ABC transporter ATY42_11865 PF01895 PhoU domain ATY42_11870 PF11776 Domain of unknown function (DUF3315) ATY42_11875 PF00929 Exonuclease ATY42_11880 PF13546 ATY42_11880 ATY42_11885 PF01609 Transposase DDE domain ATY42_11885 PF05598 ATY42_11885 ATY42_11890 PF00872 ATY42_11890 ATY42_11895 PF13546 ATY42_11895 ATY42_11915 PF13495 Phage integrase, N-terminal SAM-like domain ATY42_11920 PF02355 Protein export membrane protein ATY42_11920 PF07549 SecD/SecF GG Motif ATY42_11925 PF02355 Protein export membrane protein ATY42_11925 PF07549 SecD/SecF GG Motif ATY42_11925 PF13721 SecD export protein N-terminal TM region ATY42_11930 PF02699 Preprotein translocase subunit ATY42_11935 PF01702 Queuine tRNA-ribosyltransferase ATY42_11940 PF02547 Queuosine biosynthesis protein ATY42_11945 PF01037 AsnC family ATY42_11945 PF13412 Winged helix-turn-helix DNA-binding ATY42_11950 PF00202 Aminotransferase class-III ATY42_11960 PF04488 Glycosyltransferase sugar-binding region containing DXD motif ATY42_11975 PF05598 ATY42_11975 ATY42_11980 PF01609 Transposase DDE domain ATY42_11985 PF02333 Phytase ATY42_11990 PF00593 TonB dependent receptor ATY42_11995 PF07715 TonB-dependent Receptor Plug Domain ATY42_12000 PF14681 Uracil phosphoribosyltransferase ATY42_12005 PF13340 ATY42_12005 ATY42_12010 PF13586 ATY42_12010 ATY42_12015 PF13358 DDE superfamily endonuclease ATY42_12015 PF13551 Winged helix-turn helix ATY42_12015 PF13592 ATY42_12015 ATY42_12020 PF01019 Gamma-glutamyltranspeptidase ATY42_12025 PF00037 4Fe-4S binding domain ATY42_12040 PF01467 Cytidylyltransferase ATY42_12045 PF03602 Conserved hypothetical protein 95 ATY42_12050 PF00183 Hsp90 protein ATY42_12050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_12055 PF13358 DDE superfamily endonuclease ATY42_12060 PF13551 Winged helix-turn helix ATY42_12060 PF13592 ATY42_12060 ATY42_12070 PF00581 Rhodanese-like domain ATY42_12070 PF00899 ThiF family ATY42_12080 PF12760 Transposase zinc-ribbon domain ATY42_12080 PF12762 ATY42_12080 ATY42_12085 PF01609 Transposase DDE domain ATY42_12085 PF05598 ATY42_12085 ATY42_12090 PF01609 Transposase DDE domain ATY42_12105 PF00665 Integrase core domain ATY42_12110 PF01609 Transposase DDE domain ATY42_12110 PF05598 ATY42_12110 ATY42_12120 PF13340 ATY42_12120 ATY42_12125 PF13551 Winged helix-turn helix ATY42_12130 PF13592 ATY42_12130 ATY42_12135 PF13358 DDE superfamily endonuclease ATY42_12140 PF00994 Probable molybdopterin binding domain ATY42_12140 PF03453 MoeA N-terminal region (domain I and II) ATY42_12140 PF03454 MoeA C-terminal region (domain IV) ATY42_12145 PF01926 50S ribosome-binding GTPase ATY42_12145 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ATY42_12150 PF13360 PQQ-like domain ATY42_12155 PF09976 Tetratricopeptide repeat ATY42_12160 PF13413 Helix-turn-helix domain ATY42_12160 PF13464 ATY42_12160 ATY42_12165 PF13432 Tetratricopeptide repeat ATY42_12170 PF04055 Radical SAM superfamily ATY42_12175 PF00334 Nucleoside diphosphate kinase ATY42_12180 PF00440 Bacterial regulatory proteins, tetR family ATY42_12185 PF00378 Enoyl-CoA hydratase/isomerase family ATY42_12185 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ATY42_12185 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ATY42_12190 PF00108 Thiolase, N-terminal domain ATY42_12190 PF02803 Thiolase, C-terminal domain ATY42_12195 PF00654 Voltage gated chloride channel ATY42_12205 PF02537 ATY42_12205 ATY42_12210 PF02641 Uncharacterized ACR, COG1993 ATY42_12215 PF00004 ATPase family associated with various cellular activities (AAA) ATY42_12215 PF12002 MgsA AAA+ ATPase C terminal ATY42_12215 PF16193 ATY42_12215 ATY42_12225 PF03548 Outer membrane lipoprotein carrier protein LolA ATY42_12230 PF01841 Transglutaminase-like superfamily ATY42_12230 PF12969 Domain of Unknown Function with PDB structure (DUF3857) ATY42_12235 PF01580 FtsK/SpoIIIE family ATY42_12235 PF09397 Ftsk gamma domain ATY42_12235 PF13491 ATY42_12235 ATY42_12240 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY42_12245 PF04339 ATY42_12245 ATY42_12250 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family ATY42_12260 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ATY42_12265 PF01176 Translation initiation factor 1A / IF-1 ATY42_12270 PF00004 ATPase family associated with various cellular activities (AAA) ATY42_12270 PF02861 Clp amino terminal domain ATY42_12270 PF07724 AAA domain (Cdc48 subfamily) ATY42_12270 PF10431 C-terminal, D2-small domain, of ClpB protein ATY42_12275 PF02617 ATP-dependent Clp protease adaptor protein ClpS ATY42_12280 PF00293 NUDIX domain ATY42_12285 PF03054 tRNA methyl transferase ATY42_12290 PF04356 Protein of unknown function (DUF489) ATY42_12295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY42_12310 PF00563 EAL domain ATY42_12310 PF00990 GGDEF domain ATY42_12310 PF08447 PAS fold ATY42_12315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_12315 PF07730 Histidine kinase ATY42_12315 PF08448 PAS fold ATY42_12315 PF13426 PAS domain ATY42_12320 PF00072 Response regulator receiver domain ATY42_12320 PF00563 EAL domain ATY42_12320 PF00990 GGDEF domain ATY42_12325 PF00512 His Kinase A (phospho-acceptor) domain ATY42_12325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_12335 PF04316 Anti-sigma-28 factor, FlgM ATY42_12340 PF13144 SAF-like ATY42_12345 PF00072 Response regulator receiver domain ATY42_12345 PF01584 CheW-like domain ATY42_12350 PF00460 Flagella basal body rod protein ATY42_12355 PF00460 Flagella basal body rod protein ATY42_12355 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATY42_12360 PF03963 ATY42_12360 ATY42_12360 PF13860 FlgD Ig-like domain ATY42_12360 PF13861 FlgD Tudor-like domain ATY42_12365 PF00460 Flagella basal body rod protein ATY42_12365 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATY42_12365 PF07559 Flagellar basal body protein FlaE ATY42_12370 PF00460 Flagella basal body rod protein ATY42_12370 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATY42_12375 PF00460 Flagella basal body rod protein ATY42_12375 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATY42_12380 PF02107 ATY42_12380 ATY42_12385 PF02119 ATY42_12385 ATY42_12390 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ATY42_12390 PF10135 ATY42_12390 ATY42_12395 PF00460 Flagella basal body rod protein ATY42_12395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATY42_12400 PF00669 Bacterial flagellin N-terminal helical region ATY42_12400 PF00700 Bacterial flagellin C-terminal helical region ATY42_12405 PF00669 Bacterial flagellin N-terminal helical region ATY42_12405 PF00700 Bacterial flagellin C-terminal helical region ATY42_12410 PF02465 ATY42_12410 ATY42_12410 PF07195 ATY42_12410 ATY42_12410 PF07196 Flagellin hook IN motif ATY42_12415 PF02561 Flagellar protein FliS ATY42_12425 PF16823 ATY42_12425 ATY42_12430 PF00072 Response regulator receiver domain ATY42_12430 PF00196 Bacterial regulatory proteins, luxR family ATY42_12435 PF00309 ATY42_12435 ATY42_12435 PF04552 Sigma-54, DNA binding domain ATY42_12435 PF04963 Sigma-54 factor, core binding domain ATY42_12440 PF00072 Response regulator receiver domain ATY42_12445 PF00158 Sigma-54 interaction domain ATY42_12445 PF02954 Bacterial regulatory protein, Fis family ATY42_12445 PF06490 ATY42_12445 ATY42_12450 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ATY42_12460 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ATY42_12460 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ATY42_12465 PF13561 Enoyl-(Acyl carrier protein) reductase ATY42_12470 PF13561 Enoyl-(Acyl carrier protein) reductase ATY42_12475 PF00132 Bacterial transferase hexapeptide (six repeats) ATY42_12480 PF00355 Rieske [2Fe-2S] domain ATY42_12480 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ATY42_12485 PF00132 Bacterial transferase hexapeptide (six repeats) ATY42_12490 PF05050 Methyltransferase FkbM domain ATY42_12495 PF00535 Glycosyl transferase family 2 ATY42_12500 PF02049 ATY42_12500 ATY42_12505 PF01514 Secretory protein of YscJ/FliF family ATY42_12505 PF08345 ATY42_12505 ATY42_12510 PF01706 FliG C-terminal domain ATY42_12510 PF14841 FliG middle domain ATY42_12510 PF14842 FliG N-terminal domain ATY42_12515 PF02108 ATY42_12515 ATY42_12520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATY42_12525 PF02050 Flagellar FliJ protein ATY42_12530 PF02120 Flagellar hook-length control protein FliK ATY42_12535 PF03748 ATY42_12535 ATY42_12540 PF01052 Surface presentation of antigens (SPOA) ATY42_12540 PF02154 Flagellar motor switch protein FliM ATY42_12545 PF01052 Surface presentation of antigens (SPOA) ATY42_12550 PF04347 ATY42_12550 ATY42_12555 PF00813 ATY42_12555 ATY42_12560 PF01313 ATY42_12560 ATY42_12565 PF01311 ATY42_12565 ATY42_12570 PF00990 GGDEF domain ATY42_12570 PF07494 Two component regulator propeller ATY42_12570 PF07495 Y_Y_Y domain ATY42_12575 PF00990 GGDEF domain ATY42_12575 PF07495 Y_Y_Y domain ATY42_12580 PF00563 EAL domain ATY42_12580 PF00990 GGDEF domain ATY42_12580 PF03707 ATY42_12580 ATY42_12585 PF01312 FlhB HrpN YscU SpaS Family ATY42_12590 PF00771 FHIPEP family ATY42_12595 PF00448 SRP54-type protein, GTPase domain ATY42_12600 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ATY42_12605 PF04539 Sigma-70 region 3 ATY42_12605 PF04542 Sigma-70 region 2 ATY42_12605 PF04545 Sigma-70, region 4 ATY42_12610 PF00072 Response regulator receiver domain ATY42_12615 PF04344 Chemotaxis phosphatase, CheZ ATY42_12620 PF01584 CheW-like domain ATY42_12620 PF01627 Hpt domain ATY42_12620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_12620 PF02895 Signal transducing histidine kinase, homodimeric domain ATY42_12630 PF13936 Helix-turn-helix domain ATY42_12635 PF00665 Integrase core domain ATY42_12650 PF01609 Transposase DDE domain ATY42_12650 PF05598 ATY42_12650 ATY42_12665 PF00873 AcrB/AcrD/AcrF family ATY42_12675 PF00873 AcrB/AcrD/AcrF family ATY42_12685 PF16576 ATY42_12685 ATY42_12690 PF00034 Cytochrome c ATY42_12695 PF00034 Cytochrome c ATY42_12735 PF12760 Transposase zinc-ribbon domain ATY42_12735 PF12762 ATY42_12735 ATY42_12745 PF01609 Transposase DDE domain ATY42_12745 PF05598 ATY42_12745 ATY42_12750 PF00005 ABC transporter ATY42_12755 PF00005 ABC transporter ATY42_12755 PF00664 ABC transporter transmembrane region ATY42_12760 PF01654 ATY42_12760 ATY42_12765 PF01654 ATY42_12765 ATY42_12770 PF02322 ATY42_12770 ATY42_12775 PF08173 ATY42_12775 ATY42_12785 PF07690 Major Facilitator Superfamily ATY42_12790 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ATY42_12790 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ATY42_12795 PF00171 Aldehyde dehydrogenase family ATY42_12800 PF00696 Amino acid kinase family ATY42_12800 PF01472 PUA domain ATY42_12805 PF03795 YCII-related domain ATY42_12810 PF07883 Cupin domain ATY42_12815 PF00206 Lyase ATY42_12820 PF01118 Semialdehyde dehydrogenase, NAD binding domain ATY42_12830 PF00696 Amino acid kinase family ATY42_12830 PF04768 Protein of unknown function (DUF619) ATY42_12835 PF01546 Peptidase family M20/M25/M40 ATY42_12835 PF07687 Peptidase dimerisation domain ATY42_12840 PF13508 Acetyltransferase (GNAT) domain ATY42_12845 PF00764 Arginosuccinate synthase ATY42_12850 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ATY42_12850 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ATY42_12860 PF01406 tRNA synthetases class I (C) catalytic domain ATY42_12860 PF09190 DALR domain ATY42_12865 PF02657 Fe-S metabolism associated domain ATY42_12870 PF05977 Transmembrane secretion effector ATY42_12875 PF03572 Peptidase family S41 ATY42_12880 PF01258 Prokaryotic dksA/traR C4-type zinc finger ATY42_12890 PF01809 ATY42_12890 ATY42_12895 PF01979 Amidohydrolase family ATY42_12900 PF01551 Peptidase family M23 ATY42_12905 PF05985 Ethanolamine ammonia-lyase light chain (EutC) ATY42_12910 PF13340 ATY42_12910 ATY42_12915 PF13586 ATY42_12915 ATY42_12925 PF16242 ATY42_12925 ATY42_12930 PF13546 ATY42_12930 ATY42_12935 PF01609 Transposase DDE domain ATY42_12935 PF05598 ATY42_12935 ATY42_12940 PF13546 ATY42_12940 ATY42_12945 PF01095 Pectinesterase ATY42_12955 PF00665 Integrase core domain ATY42_12965 PF00295 Glycosyl hydrolases family 28 ATY42_12975 PF13419 Haloacid dehalogenase-like hydrolase ATY42_12980 PF13489 Methyltransferase domain ATY42_12985 PF01979 Amidohydrolase family ATY42_12995 PF01132 Elongation factor P (EF-P) OB domain ATY42_12995 PF08207 Elongation factor P (EF-P) KOW-like domain ATY42_12995 PF09285 Elongation factor P, C-terminal ATY42_13000 PF13394 4Fe-4S single cluster domain ATY42_13005 PF00563 EAL domain ATY42_13005 PF00672 HAMP domain ATY42_13005 PF00990 GGDEF domain ATY42_13005 PF17203 ATY42_13005 ATY42_13010 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein ATY42_13015 PF00588 SpoU rRNA Methylase family ATY42_13020 PF00459 Inositol monophosphatase family ATY42_13025 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ATY42_13025 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ATY42_13030 PF00545 ribonuclease ATY42_13035 PF01337 Barstar (barnase inhibitor) ATY42_13045 PF00005 ABC transporter ATY42_13045 PF12848 ABC transporter ATY42_13045 PF16326 ATY42_13045 ATY42_13050 PF00270 DEAD/DEAH box helicase ATY42_13050 PF00271 Helicase conserved C-terminal domain ATY42_13050 PF03880 DbpA RNA binding domain ATY42_13055 PF00156 Phosphoribosyl transferase domain ATY42_13060 PF02696 ATY42_13060 ATY42_13065 PF00135 Carboxylesterase family ATY42_13070 PF00043 Glutathione S-transferase, C-terminal domain ATY42_13070 PF02798 Glutathione S-transferase, N-terminal domain ATY42_13075 PF00313 'Cold-shock' DNA-binding domain ATY42_13080 PF02639 ATY42_13080 ATY42_13085 PF07152 YaeQ protein ATY42_13090 PF03486 HI0933-like protein ATY42_13095 PF00563 EAL domain ATY42_13095 PF00990 GGDEF domain ATY42_13095 PF13188 PAS domain ATY42_13100 PF01435 Peptidase family M48 ATY42_13105 PF00749 tRNA synthetases class I (E and Q), catalytic domain ATY42_13110 PF13561 Enoyl-(Acyl carrier protein) reductase ATY42_13115 PF05233 ATY42_13115 ATY42_13115 PF07879 ATY42_13115 ATY42_13120 PF01963 ATY42_13120 ATY42_13125 PF07920 Protein of unknown function (DUF1684) ATY42_13130 PF01119 DNA mismatch repair protein, C-terminal domain ATY42_13130 PF08676 MutL C terminal dimerisation domain ATY42_13130 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_13135 PF01520 N-acetylmuramoyl-L-alanine amidase ATY42_13135 PF11741 AMIN domain ATY42_13140 PF02367 Uncharacterised P-loop hydrolase UPF0079 ATY42_13145 PF01256 Carbohydrate kinase ATY42_13145 PF03853 YjeF-related protein N-terminus ATY42_13150 PF08331 ATY42_13150 ATY42_13150 PF13484 ATY42_13150 ATY42_13155 PF13586 ATY42_13155 ATY42_13160 PF13340 ATY42_13160 ATY42_13165 PF02601 ATY42_13165 ATY42_13165 PF13742 ATY42_13165 ATY42_13170 PF06057 Bacterial virulence protein (VirJ) ATY42_13175 PF01609 Transposase DDE domain ATY42_13180 PF03781 Sulfatase-modifying factor enzyme 1 ATY42_13185 PF00570 HRDC domain ATY42_13185 PF01612 3'-5' exonuclease ATY42_13200 PF00816 H-NS histone family ATY42_13220 PF05016 Plasmid stabilisation system protein ATY42_13225 PF01402 Ribbon-helix-helix protein, copG family ATY42_13230 PF00872 ATY42_13230 ATY42_13235 PF12760 Transposase zinc-ribbon domain ATY42_13235 PF12762 ATY42_13235 ATY42_13250 PF11743 ATY42_13250 ATY42_13260 PF04386 Stringent starvation protein B ATY42_13265 PF00043 Glutathione S-transferase, C-terminal domain ATY42_13265 PF13417 Glutathione S-transferase, N-terminal domain ATY42_13270 PF02167 Cytochrome C1 family ATY42_13275 PF00032 Cytochrome b(C-terminal)/b6/petD ATY42_13275 PF00033 Cytochrome b(N-terminal)/b6/petB ATY42_13280 PF00355 Rieske [2Fe-2S] domain ATY42_13280 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ATY42_13285 PF01464 Transglycosylase SLT domain ATY42_13295 PF02798 Glutathione S-transferase, N-terminal domain ATY42_13305 PF00919 Uncharacterized protein family UPF0004 ATY42_13305 PF01938 TRAM domain ATY42_13305 PF04055 Radical SAM superfamily ATY42_13310 PF02562 PhoH-like protein ATY42_13320 PF02130 Uncharacterized protein family UPF0054 ATY42_13330 PF00571 CBS domain ATY42_13330 PF03471 Transporter associated domain ATY42_13335 PF13387 ATY42_13335 ATY42_13340 PF01544 CorA-like Mg2+ transporter protein ATY42_13345 PF00171 Aldehyde dehydrogenase family ATY42_13355 PF00528 Binding-protein-dependent transport system inner membrane component ATY42_13370 PF02321 Outer membrane efflux protein ATY42_13375 PF07690 Major Facilitator Superfamily ATY42_13380 PF13533 Biotin-lipoyl like ATY42_13380 PF16576 ATY42_13380 ATY42_13390 PF00120 Glutamine synthetase, catalytic domain ATY42_13400 PF00120 Glutamine synthetase, catalytic domain ATY42_13405 PF01266 FAD dependent oxidoreductase ATY42_13410 PF00072 Response regulator receiver domain ATY42_13410 PF00990 GGDEF domain ATY42_13415 PF00083 Sugar (and other) transporter ATY42_13415 PF07690 Major Facilitator Superfamily ATY42_13425 PF00384 Molybdopterin oxidoreductase ATY42_13425 PF01568 Molydopterin dinucleotide binding domain ATY42_13430 PF02634 FdhD/NarQ family ATY42_13435 PF07690 Major Facilitator Superfamily ATY42_13445 PF00202 Aminotransferase class-III ATY42_13450 PF13086 AAA domain ATY42_13450 PF13087 AAA domain ATY42_13460 PF04286 ATY42_13460 ATY42_13465 PF00072 Response regulator receiver domain ATY42_13465 PF00512 His Kinase A (phospho-acceptor) domain ATY42_13465 PF01627 Hpt domain ATY42_13465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_13465 PF03924 CHASE domain ATY42_13465 PF08448 PAS fold ATY42_13465 PF13426 PAS domain ATY42_13470 PF00072 Response regulator receiver domain ATY42_13470 PF13487 HD domain ATY42_13475 PF01609 Transposase DDE domain ATY42_13475 PF05598 ATY42_13475 ATY42_13480 PF05088 ATY42_13480 ATY42_13480 PF12466 ATY42_13480 ATY42_13485 PF00440 Bacterial regulatory proteins, tetR family ATY42_13485 PF16859 ATY42_13485 ATY42_13490 PF16576 ATY42_13490 ATY42_13495 PF00873 AcrB/AcrD/AcrF family ATY42_13505 PF12760 Transposase zinc-ribbon domain ATY42_13505 PF12762 ATY42_13505 ATY42_13515 PF00356 Bacterial regulatory proteins, lacI family ATY42_13515 PF13377 Periplasmic binding protein-like domain ATY42_13520 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ATY42_13520 PF00381 PTS HPr component phosphorylation site ATY42_13520 PF00391 PEP-utilising enzyme, mobile domain ATY42_13520 PF02896 PEP-utilising enzyme, TIM barrel domain ATY42_13520 PF05524 PEP-utilising enzyme, N-terminal ATY42_13525 PF00294 pfkB family carbohydrate kinase ATY42_13530 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ATY42_13535 PF04966 Carbohydrate-selective porin, OprB family ATY42_13545 PF01609 Transposase DDE domain ATY42_13545 PF05598 ATY42_13545 ATY42_13585 PF13503 ATY42_13585 ATY42_13600 PF00665 Integrase core domain ATY42_13600 PF13276 ATY42_13600 ATY42_13610 PF05954 Phage late control gene D protein (GPD) ATY42_13620 PF00665 Integrase core domain ATY42_13620 PF13276 ATY42_13620 ATY42_13630 PF05954 Phage late control gene D protein (GPD) ATY42_13635 PF13546 ATY42_13635 ATY42_13640 PF06627 Protein of unknown function (DUF1153) ATY42_13645 PF13546 ATY42_13645 ATY42_13655 PF08845 ATY42_13655 ATY42_13670 PF01609 Transposase DDE domain ATY42_13670 PF05598 ATY42_13670 ATY42_13685 PF00593 TonB dependent receptor ATY42_13685 PF07715 TonB-dependent Receptor Plug Domain ATY42_13690 PF04314 Protein of unknown function (DUF461) ATY42_13700 PF00593 TonB dependent receptor ATY42_13700 PF07715 TonB-dependent Receptor Plug Domain ATY42_13710 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ATY42_13710 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ATY42_13715 PF07715 TonB-dependent Receptor Plug Domain ATY42_13720 PF00593 TonB dependent receptor ATY42_13730 PF01618 ATY42_13730 ATY42_13735 PF00691 OmpA family ATY42_13735 PF13677 ATY42_13735 ATY42_13740 PF13614 AAA domain ATY42_13745 PF01584 CheW-like domain ATY42_13750 PF13466 STAS domain ATY42_13755 PF00072 Response regulator receiver domain ATY42_13760 PF01584 CheW-like domain ATY42_13760 PF01627 Hpt domain ATY42_13760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_13760 PF02895 Signal transducing histidine kinase, homodimeric domain ATY42_13770 PF00665 Integrase core domain ATY42_13770 PF13936 Helix-turn-helix domain ATY42_13780 PF13557 ATY42_13780 ATY42_13785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY42_13790 PF12760 Transposase zinc-ribbon domain ATY42_13790 PF12762 ATY42_13790 ATY42_13795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY42_13795 PF00672 HAMP domain ATY42_13795 PF12729 ATY42_13795 ATY42_13800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY42_13800 PF00672 HAMP domain ATY42_13800 PF05227 CHASE3 domain ATY42_13805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY42_13805 PF12729 ATY42_13805 ATY42_13810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY42_13810 PF12729 ATY42_13810 ATY42_13815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY42_13815 PF00672 HAMP domain ATY42_13815 PF12729 ATY42_13815 ATY42_13820 PF07238 PilZ domain ATY42_13820 PF07317 Flagellar regulator YcgR ATY42_13825 PF01584 CheW-like domain ATY42_13830 PF01609 Transposase DDE domain ATY42_13835 PF01609 Transposase DDE domain ATY42_13845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ATY42_13845 PF00672 HAMP domain ATY42_13845 PF12729 ATY42_13845 ATY42_13850 PF01739 CheR methyltransferase, SAM binding domain ATY42_13850 PF03705 CheR methyltransferase, all-alpha domain ATY42_13855 PF03975 CheD chemotactic sensory transduction ATY42_13860 PF00072 Response regulator receiver domain ATY42_13860 PF01339 CheB methylesterase ATY42_13865 PF00563 EAL domain ATY42_13865 PF00990 GGDEF domain ATY42_13865 PF13185 GAF domain ATY42_13865 PF13426 PAS domain ATY42_13870 PF00561 alpha/beta hydrolase fold ATY42_13875 PF00330 Aconitase family (aconitate hydratase) ATY42_13875 PF06434 Aconitate hydratase 2 N-terminus ATY42_13875 PF11791 Aconitate B N-terminal domain ATY42_13880 PF01850 PIN domain ATY42_13885 PF04014 Antidote-toxin recognition MazE ATY42_13890 PF00330 Aconitase family (aconitate hydratase) ATY42_13890 PF00694 Aconitase C-terminal domain ATY42_13900 PF00501 AMP-binding enzyme ATY42_13900 PF13193 AMP-binding enzyme C-terminal domain ATY42_13905 PF00378 Enoyl-CoA hydratase/isomerase family ATY42_13910 PF00072 Response regulator receiver domain ATY42_13910 PF00512 His Kinase A (phospho-acceptor) domain ATY42_13910 PF01627 Hpt domain ATY42_13910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_13920 PF00072 Response regulator receiver domain ATY42_13920 PF01966 HD domain ATY42_13925 PF00152 tRNA synthetases class II (D, K and N) ATY42_13925 PF01336 OB-fold nucleic acid binding domain ATY42_13930 PF00472 RF-1 domain ATY42_13930 PF03462 PCRF domain ATY42_13935 PF04397 LytTr DNA-binding domain ATY42_13945 PF13542 ATY42_13945 ATY42_13960 PF01368 DHH family ATY42_13960 PF02272 DHHA1 domain ATY42_13970 PF01272 Transcription elongation factor, GreA/GreB, C-term ATY42_13970 PF03449 Transcription elongation factor, N-terminal ATY42_13975 PF02142 MGS-like domain ATY42_13975 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ATY42_13975 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ATY42_13985 PF00117 Glutamine amidotransferase class-I ATY42_13985 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ATY42_13990 PF01113 Dihydrodipicolinate reductase, N-terminus ATY42_13990 PF05173 Dihydrodipicolinate reductase, C-terminus ATY42_13995 PF13586 ATY42_13995 ATY42_14000 PF13340 ATY42_14000 ATY42_14005 PF03473 MOSC domain ATY42_14005 PF03475 3-alpha domain ATY42_14010 PF00155 Aminotransferase class I and II ATY42_14030 PF02421 Ferrous iron transport protein B ATY42_14030 PF07664 ATY42_14030 ATY42_14030 PF07670 Nucleoside recognition ATY42_14035 PF04023 FeoA domain ATY42_14040 PF00378 Enoyl-CoA hydratase/isomerase family ATY42_14045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ATY42_14050 PF00682 HMGL-like ATY42_14055 PF00106 short chain dehydrogenase ATY42_14060 PF01132 Elongation factor P (EF-P) OB domain ATY42_14060 PF08207 Elongation factor P (EF-P) KOW-like domain ATY42_14060 PF09285 Elongation factor P, C-terminal ATY42_14075 PF13936 Helix-turn-helix domain ATY42_14080 PF00665 Integrase core domain ATY42_14085 PF00083 Sugar (and other) transporter ATY42_14095 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ATY42_14095 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ATY42_14105 PF14498 Glycosyl hydrolase family 65, N-terminal domain ATY42_14110 PF01055 Glycosyl hydrolases family 31 ATY42_14110 PF07691 PA14 domain ATY42_14110 PF16338 ATY42_14110 ATY42_14110 PF17137 ATY42_14110 ATY42_14120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY42_14120 PF03466 LysR substrate binding domain ATY42_14125 PF01081 KDPG and KHG aldolase ATY42_14130 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ATY42_14130 PF13378 Enolase C-terminal domain-like ATY42_14135 PF08450 SMP-30/Gluconolaconase/LRE-like region ATY42_14140 PF05035 2-keto-3-deoxy-galactonokinase ATY42_14145 PF00037 4Fe-4S binding domain ATY42_14145 PF11953 Domain of unknown function (DUF3470) ATY42_14155 PF00701 Dihydrodipicolinate synthetase family ATY42_14160 PF13740 ACT domain ATY42_14165 PF06877 Regulator of ribonuclease activity B ATY42_14170 PF00578 AhpC/TSA family ATY42_14175 PF02562 PhoH-like protein ATY42_14175 PF13638 PIN domain ATY42_14185 PF08543 Phosphomethylpyrimidine kinase ATY42_14210 PF00581 Rhodanese-like domain ATY42_14210 PF09335 ATY42_14210 ATY42_14215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY42_14215 PF03466 LysR substrate binding domain ATY42_14220 PF02678 Pirin ATY42_14240 PF01745 Isopentenyl transferase ATY42_14245 PF03796 DnaB-like helicase C terminal domain ATY42_14255 PF13730 ATY42_14255 ATY42_14265 PF02599 Global regulator protein family ATY42_14270 PF01411 tRNA synthetases class II (A) ATY42_14270 PF02272 DHHA1 domain ATY42_14270 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ATY42_14275 PF02631 RecX family ATY42_14280 PF00154 recA bacterial DNA recombination protein ATY42_14285 PF00717 Peptidase S24-like ATY42_14285 PF01726 LexA DNA binding domain ATY42_14290 PF03109 ATY42_14290 ATY42_14295 PF02464 Competence-damaged protein ATY42_14300 PF01926 50S ribosome-binding GTPase ATY42_14300 PF13167 ATY42_14300 ATY42_14300 PF16360 ATY42_14300 ATY42_14305 PF17209 ATY42_14305 ATY42_14310 PF01715 IPP transferase ATY42_14315 PF00809 Pterin binding enzyme ATY42_14320 PF00004 ATPase family associated with various cellular activities (AAA) ATY42_14320 PF01434 Peptidase family M41 ATY42_14320 PF06480 FtsH Extracellular ATY42_14325 PF01728 FtsJ-like methyltransferase ATY42_14330 PF01985 CRS1 / YhbY (CRM) domain ATY42_14335 PF04430 Protein of unknown function (DUF498/DUF598) ATY42_14340 PF01476 LysM domain ATY42_14340 PF01551 Peptidase family M23 ATY42_14345 PF09335 ATY42_14345 ATY42_14350 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) ATY42_14355 PF01975 Survival protein SurE ATY42_14360 PF01713 Smr domain ATY42_14365 PF01142 tRNA pseudouridine synthase D (TruD) ATY42_14370 PF02542 YgbB family ATY42_14375 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ATY42_14380 PF04977 Septum formation initiator ATY42_14385 PF00113 Enolase, C-terminal TIM barrel domain ATY42_14385 PF03952 Enolase, N-terminal domain ATY42_14395 PF00793 DAHP synthetase I family ATY42_14400 PF00117 Glutamine amidotransferase class-I ATY42_14400 PF06418 CTP synthase N-terminus ATY42_14410 PF00204 DNA gyrase B ATY42_14410 PF00986 DNA gyrase B subunit, carboxyl terminus ATY42_14410 PF01751 Toprim domain ATY42_14410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_14415 PF01609 Transposase DDE domain ATY42_14420 PF00450 Serine carboxypeptidase ATY42_14425 PF02698 DUF218 domain ATY42_14430 PF01384 ATY42_14430 ATY42_14435 PF01865 Protein of unknown function DUF47 ATY42_14440 PF00571 CBS domain ATY42_14440 PF01595 ATY42_14440 ATY42_14440 PF03471 Transporter associated domain ATY42_14450 PF16242 ATY42_14450 ATY42_14455 PF00296 Luciferase-like monooxygenase ATY42_14460 PF00083 Sugar (and other) transporter ATY42_14465 PF00005 ABC transporter ATY42_14475 PF04055 Radical SAM superfamily ATY42_14480 PF14907 Uncharacterised nucleotidyltransferase ATY42_14485 PF13936 Helix-turn-helix domain ATY42_14490 PF00534 Glycosyl transferases group 1 ATY42_14490 PF13579 Glycosyl transferase 4-like domain ATY42_14495 PF00534 Glycosyl transferases group 1 ATY42_14495 PF13439 Glycosyltransferase Family 4 ATY42_14500 PF08241 Methyltransferase domain ATY42_14505 PF01979 Amidohydrolase family ATY42_14510 PF13649 Methyltransferase domain ATY42_14515 PF02706 Chain length determinant protein ATY42_14525 PF00535 Glycosyl transferase family 2 ATY42_14530 PF01943 ATY42_14530 ATY42_14535 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ATY42_14540 PF13480 Acetyltransferase (GNAT) domain ATY42_14550 PF00132 Bacterial transferase hexapeptide (six repeats) ATY42_14555 PF05523 WxcM-like, C-terminal ATY42_14560 PF01292 Prokaryotic cytochrome b561 ATY42_14570 PF00034 Cytochrome c ATY42_14580 PF04542 Sigma-70 region 2 ATY42_14580 PF04545 Sigma-70, region 4 ATY42_14585 PF13490 Putative zinc-finger ATY42_14590 PF00082 Subtilase family ATY42_14595 PF01578 ATY42_14595 ATY42_14600 PF04995 ATY42_14600 ATY42_14605 PF03100 CcmE ATY42_14610 PF01578 ATY42_14610 ATY42_14610 PF16327 ATY42_14610 ATY42_14615 PF08534 Redoxin ATY42_14620 PF03918 Cytochrome C biogenesis protein ATY42_14645 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY42_14685 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY42_14690 PF00873 AcrB/AcrD/AcrF family ATY42_14695 PF05598 ATY42_14695 ATY42_14700 PF00873 AcrB/AcrD/AcrF family ATY42_14705 PF16576 ATY42_14705 ATY42_14725 PF01609 Transposase DDE domain ATY42_14725 PF05598 ATY42_14725 ATY42_14735 PF01527 Transposase ATY42_14740 PF13276 ATY42_14740 ATY42_14750 PF01526 ATY42_14750 ATY42_14755 PF00072 Response regulator receiver domain ATY42_14755 PF00486 Transcriptional regulatory protein, C terminal ATY42_14760 PF00034 Cytochrome c ATY42_14760 PF03150 Di-haem cytochrome c peroxidase ATY42_14765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_14770 PF03466 LysR substrate binding domain ATY42_14775 PF06812 ATY42_14775 ATY42_14780 PF13340 ATY42_14780 ATY42_14785 PF01609 Transposase DDE domain ATY42_14790 PF01609 Transposase DDE domain ATY42_14800 PF00069 Protein kinase domain ATY42_14800 PF03781 Sulfatase-modifying factor enzyme 1 ATY42_14805 PF13672 Protein phosphatase 2C ATY42_14810 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) ATY42_14815 PF06744 ATY42_14815 ATY42_14815 PF06761 ATY42_14815 ATY42_14815 PF14331 ATY42_14815 ATY42_14820 PF00691 OmpA family ATY42_14820 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) ATY42_14825 PF05936 ATY42_14825 ATY42_14830 PF00498 FHA domain ATY42_14840 PF05954 Phage late control gene D protein (GPD) ATY42_14845 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ATY42_14855 PF14441 ATY42_14855 ATY42_14860 PF00004 ATPase family associated with various cellular activities (AAA) ATY42_14860 PF07724 AAA domain (Cdc48 subfamily) ATY42_14860 PF10431 C-terminal, D2-small domain, of ClpB protein ATY42_14865 PF06996 ATY42_14865 ATY42_14870 PF05947 ATY42_14870 ATY42_14875 PF04965 Gene 25-like lysozyme ATY42_14880 PF07024 ImpE protein ATY42_14885 PF05638 Protein of unknown function (DUF796) ATY42_14890 PF05943 ATY42_14890 ATY42_14895 PF05591 ATY42_14895 ATY42_14905 PF01609 Transposase DDE domain ATY42_14905 PF05598 ATY42_14905 ATY42_14910 PF13546 ATY42_14910 ATY42_14915 PF01610 ATY42_14915 ATY42_14915 PF13542 ATY42_14915 ATY42_14920 PF01609 Transposase DDE domain ATY42_14920 PF05598 ATY42_14920 ATY42_14950 PF13683 ATY42_14950 ATY42_14960 PF01106 NifU-like domain ATY42_14965 PF01329 Pterin 4 alpha carbinolamine dehydratase ATY42_14970 PF03544 Gram-negative bacterial TonB protein C-terminal ATY42_14975 PF02535 ATY42_14975 ATY42_14990 PF00849 RNA pseudouridylate synthase ATY42_14990 PF01479 S4 domain ATY42_14995 PF00575 S1 RNA binding domain ATY42_14995 PF10150 Ribonuclease E/G family ATY42_15005 PF13586 ATY42_15005 ATY42_15010 PF13340 ATY42_15010 ATY42_15015 PF00072 Response regulator receiver domain ATY42_15015 PF00196 Bacterial regulatory proteins, luxR family ATY42_15020 PF00581 Rhodanese-like domain ATY42_15025 PF01609 Transposase DDE domain ATY42_15025 PF05598 ATY42_15025 ATY42_15035 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATY42_15040 PF03486 HI0933-like protein ATY42_15045 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ATY42_15045 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ATY42_15045 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ATY42_15055 PF01648 4'-phosphopantetheinyl transferase superfamily ATY42_15065 PF01610 ATY42_15065 ATY42_15065 PF13542 ATY42_15065 ATY42_15070 PF13546 ATY42_15070 ATY42_15075 PF10685 ATY42_15075 ATY42_15085 PF01609 Transposase DDE domain ATY42_15085 PF05598 ATY42_15085 ATY42_15090 PF13546 ATY42_15090 ATY42_15095 PF12760 Transposase zinc-ribbon domain ATY42_15095 PF12762 ATY42_15095 ATY42_15105 PF12760 Transposase zinc-ribbon domain ATY42_15105 PF12762 ATY42_15105 ATY42_15110 PF13379 NMT1-like family ATY42_15115 PF03861 ANTAR domain ATY42_15120 PF00072 Response regulator receiver domain ATY42_15125 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ATY42_15125 PF10414 Sirohaem synthase dimerisation region ATY42_15125 PF13241 Putative NAD(P)-binding ATY42_15125 PF14824 Sirohaem biosynthesis protein central ATY42_15140 PF12625 ATY42_15140 ATY42_15150 PF12804 MobA-like NTP transferase domain ATY42_15155 PF00994 Probable molybdopterin binding domain ATY42_15155 PF03453 MoeA N-terminal region (domain I and II) ATY42_15155 PF03454 MoeA C-terminal region (domain IV) ATY42_15175 PF01610 ATY42_15175 ATY42_15175 PF13542 ATY42_15175 ATY42_15185 PF13340 ATY42_15185 ATY42_15190 PF13358 DDE superfamily endonuclease ATY42_15190 PF13551 Winged helix-turn helix ATY42_15190 PF13592 ATY42_15190 ATY42_15195 PF01609 Transposase DDE domain ATY42_15200 PF07944 Putative glycosyl hydrolase of unknown function (DUF1680) ATY42_15215 PF07715 TonB-dependent Receptor Plug Domain ATY42_15220 PF07715 TonB-dependent Receptor Plug Domain ATY42_15230 PF00326 Prolyl oligopeptidase family ATY42_15230 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ATY42_15235 PF04616 Glycosyl hydrolases family 43 ATY42_15240 PF00754 F5/8 type C domain ATY42_15240 PF07532 ATY42_15240 ATY42_15245 PF00593 TonB dependent receptor ATY42_15245 PF07715 TonB-dependent Receptor Plug Domain ATY42_15255 PF00082 Subtilase family ATY42_15255 PF09286 Pro-kumamolisin, activation domain ATY42_15290 PF00326 Prolyl oligopeptidase family ATY42_15290 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ATY42_15295 PF13520 Amino acid permease ATY42_15300 PF05960 Bacterial protein of unknown function (DUF885) ATY42_15305 PF05960 Bacterial protein of unknown function (DUF885) ATY42_15310 PF00557 Metallopeptidase family M24 ATY42_15310 PF01321 Creatinase/Prolidase N-terminal domain ATY42_15315 PF00171 Aldehyde dehydrogenase family ATY42_15320 PF00701 Dihydrodipicolinate synthetase family ATY42_15325 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY42_15330 PF13510 2Fe-2S iron-sulfur cluster binding domain ATY42_15335 PF01266 FAD dependent oxidoreductase ATY42_15340 PF05544 Proline racemase ATY42_15345 PF08448 PAS fold ATY42_15345 PF12833 Helix-turn-helix domain ATY42_15350 PF00448 SRP54-type protein, GTPase domain ATY42_15350 PF02881 SRP54-type protein, helical bundle domain ATY42_15360 PF00633 Helix-hairpin-helix motif ATY42_15360 PF00730 HhH-GPD superfamily base excision DNA repair protein ATY42_15360 PF14815 NUDIX domain ATY42_15365 PF04362 Bacterial Fe(2+) trafficking ATY42_15370 PF00072 Response regulator receiver domain ATY42_15370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_15370 PF13426 PAS domain ATY42_15375 PF05598 ATY42_15375 ATY42_15380 PF01609 Transposase DDE domain ATY42_15385 PF10294 Putative methyltransferase ATY42_15395 PF12760 Transposase zinc-ribbon domain ATY42_15395 PF12762 ATY42_15395 ATY42_15415 PF08843 Nucleotidyl transferase of unknown function (DUF1814) ATY42_15420 PF13338 ATY42_15420 ATY42_15430 PF04703 FaeA-like protein ATY42_15440 PF13358 DDE superfamily endonuclease ATY42_15440 PF13551 Winged helix-turn helix ATY42_15440 PF13592 ATY42_15440 ATY42_15460 PF13358 DDE superfamily endonuclease ATY42_15460 PF13518 Helix-turn-helix domain ATY42_15465 PF01963 ATY42_15465 ATY42_15470 PF06172 Cupin superfamily (DUF985) ATY42_15475 PF03808 ATY42_15475 ATY42_15480 PF04230 ATY42_15480 ATY42_15490 PF13440 ATY42_15490 ATY42_15495 PF13692 Glycosyl transferases group 1 ATY42_15500 PF00534 Glycosyl transferases group 1 ATY42_15500 PF13439 Glycosyltransferase Family 4 ATY42_15505 PF01757 ATY42_15505 ATY42_15510 PF01757 ATY42_15510 ATY42_15520 PF02397 ATY42_15520 ATY42_15520 PF13727 CoA-binding domain ATY42_15525 PF02706 Chain length determinant protein ATY42_15525 PF13807 ATY42_15525 ATY42_15530 PF02563 Polysaccharide biosynthesis/export protein ATY42_15530 PF10531 SLBB domain ATY42_15540 PF13411 MerR HTH family regulatory protein ATY42_15545 PF00216 Bacterial DNA-binding protein ATY42_15550 PF01588 Putative tRNA binding domain ATY42_15550 PF03147 Ferredoxin-fold anticodon binding domain ATY42_15550 PF03483 B3/4 domain ATY42_15550 PF03484 tRNA synthetase B5 domain ATY42_15555 PF01409 tRNA synthetases class II core domain (F) ATY42_15555 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ATY42_15560 PF00453 Ribosomal protein L20 ATY42_15565 PF01632 Ribosomal protein L35 ATY42_15570 PF00707 Translation initiation factor IF-3, C-terminal domain ATY42_15570 PF05198 Translation initiation factor IF-3, N-terminal domain ATY42_15575 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ATY42_15575 PF02824 TGS domain ATY42_15575 PF03129 Anticodon binding domain ATY42_15575 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ATY42_15580 PF13683 ATY42_15580 ATY42_15585 PF01527 Transposase ATY42_15605 PF00271 Helicase conserved C-terminal domain ATY42_15605 PF02151 UvrB/uvrC motif ATY42_15605 PF04851 Type III restriction enzyme, res subunit ATY42_15605 PF12344 Ultra-violet resistance protein B ATY42_15610 PF12019 Type II transport protein GspH ATY42_15620 PF16732 ATY42_15620 ATY42_15625 PF05567 Neisseria PilC beta-propeller domain ATY42_15630 PF14341 ATY42_15630 ATY42_15635 PF07963 Prokaryotic N-terminal methylation motif ATY42_15635 PF16074 ATY42_15635 ATY42_15640 PF07963 Prokaryotic N-terminal methylation motif ATY42_15645 PF07963 Prokaryotic N-terminal methylation motif ATY42_15645 PF12019 Type II transport protein GspH ATY42_15650 PF03641 Possible lysine decarboxylase ATY42_15650 PF11892 Domain of unknown function (DUF3412) ATY42_15650 PF14793 Domain of unknown function (DUF4478) ATY42_15655 PF07715 TonB-dependent Receptor Plug Domain ATY42_15655 PF13620 Carboxypeptidase regulatory-like domain ATY42_15660 PF01914 ATY42_15660 ATY42_15665 PF00106 short chain dehydrogenase ATY42_15670 PF00462 Glutaredoxin ATY42_15675 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ATY42_15675 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ATY42_15680 PF02222 ATP-grasp domain ATY42_15685 PF00731 AIR carboxylase ATY42_15690 PF03966 Trm112p-like protein ATY42_15695 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ATY42_15695 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ATY42_15700 PF10030 ATY42_15700 ATY42_15705 PF00013 KH domain ATY42_15705 PF00575 S1 RNA binding domain ATY42_15705 PF01138 3' exoribonuclease family, domain 1 ATY42_15705 PF03725 3' exoribonuclease family, domain 2 ATY42_15705 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ATY42_15710 PF00312 Ribosomal protein S15 ATY42_15715 PF01509 TruB family pseudouridylate synthase (N terminal domain) ATY42_15715 PF09157 Pseudouridine synthase II TruB, C-terminal ATY42_15715 PF16198 ATY42_15715 ATY42_15720 PF02033 Ribosome-binding factor A ATY42_15725 PF00009 Elongation factor Tu GTP binding domain ATY42_15725 PF04760 Translation initiation factor IF-2, N-terminal region ATY42_15725 PF08364 ATY42_15725 ATY42_15725 PF11987 Translation-initiation factor 2 ATY42_15730 PF00575 S1 RNA binding domain ATY42_15730 PF08529 NusA N-terminal domain ATY42_15730 PF13184 NusA-like KH domain ATY42_15730 PF14520 Helix-hairpin-helix domain ATY42_15735 PF02576 Uncharacterised BCR, YhbC family COG0779 ATY42_15735 PF17384 ATY42_15735 ATY42_15745 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains ATY42_15750 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains ATY42_15755 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains ATY42_15755 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ATY42_15760 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ATY42_15765 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ATY42_15770 PF12838 4Fe-4S dicluster domain ATY42_15775 PF00146 NADH dehydrogenase ATY42_15780 PF00384 Molybdopterin oxidoreductase ATY42_15780 PF01568 Molydopterin dinucleotide binding domain ATY42_15780 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ATY42_15780 PF13510 2Fe-2S iron-sulfur cluster binding domain ATY42_15785 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ATY42_15785 PF10531 SLBB domain ATY42_15785 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ATY42_15790 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin ATY42_15795 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ATY42_15800 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ATY42_15805 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ATY42_15810 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ATY42_15820 PF03840 Preprotein translocase SecG subunit ATY42_15825 PF00121 Triosephosphate isomerase ATY42_15830 PF00106 short chain dehydrogenase ATY42_15835 PF01152 Bacterial-like globin ATY42_15840 PF13586 ATY42_15840 ATY42_15845 PF13340 ATY42_15845 ATY42_15855 PF00563 EAL domain ATY42_15855 PF00672 HAMP domain ATY42_15855 PF00990 GGDEF domain ATY42_15855 PF14827 Sensory domain of two-component sensor kinase ATY42_15865 PF03171 2OG-Fe(II) oxygenase superfamily ATY42_15865 PF14226 non-haem dioxygenase in morphine synthesis N-terminal ATY42_15870 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ATY42_15870 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ATY42_15870 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ATY42_15870 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ATY42_15875 PF01039 Carboxyl transferase domain ATY42_15880 PF00290 Tryptophan synthase alpha chain ATY42_15890 PF00291 Pyridoxal-phosphate dependent enzyme ATY42_15895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY42_15895 PF03466 LysR substrate binding domain ATY42_15900 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ATY42_15905 PF01416 tRNA pseudouridine synthase ATY42_15920 PF01118 Semialdehyde dehydrogenase, NAD binding domain ATY42_15920 PF02774 Semialdehyde dehydrogenase, dimerisation domain ATY42_15925 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ATY42_15925 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATY42_15930 PF01264 Chorismate synthase ATY42_15935 PF05175 Methyltransferase small domain ATY42_15940 PF02630 SCO1/SenC ATY42_15945 PF02666 ATY42_15945 ATY42_15950 PF01464 Transglycosylase SLT domain ATY42_15950 PF01476 LysM domain ATY42_15955 PF05872 ATY42_15955 ATY42_15960 PF13936 Helix-turn-helix domain ATY42_15965 PF01694 Rhomboid family ATY42_15975 PF01272 Transcription elongation factor, GreA/GreB, C-term ATY42_15975 PF03449 Transcription elongation factor, N-terminal ATY42_15980 PF00919 Uncharacterized protein family UPF0004 ATY42_15980 PF04055 Radical SAM superfamily ATY42_15985 PF01738 Dienelactone hydrolase family ATY42_15990 PF01230 HIT domain ATY42_16000 PF00692 dUTPase ATY42_16005 PF10609 ParA/MinD ATPase like ATY42_16015 PF01431 Peptidase family M13 ATY42_16015 PF05649 Peptidase family M13 ATY42_16020 PF01694 Rhomboid family ATY42_16025 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ATY42_16030 PF12760 Transposase zinc-ribbon domain ATY42_16030 PF12762 ATY42_16030 ATY42_16040 PF01266 FAD dependent oxidoreductase ATY42_16045 PF04235 ATY42_16045 ATY42_16050 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATY42_16055 PF00877 NlpC/P60 family ATY42_16060 PF00877 NlpC/P60 family ATY42_16065 PF03061 Thioesterase superfamily ATY42_16075 PF00375 Sodium:dicarboxylate symporter family ATY42_16080 PF00245 Alkaline phosphatase ATY42_16085 PF01171 PP-loop family ATY42_16085 PF09179 TilS substrate binding domain ATY42_16085 PF11734 TilS substrate C-terminal domain ATY42_16090 PF02609 Exonuclease VII small subunit ATY42_16095 PF00348 Polyprenyl synthetase ATY42_16105 PF09685 ATY42_16105 ATY42_16115 PF01523 Putative modulator of DNA gyrase ATY42_16120 PF04751 Protein of unknown function (DUF615) ATY42_16125 PF01523 Putative modulator of DNA gyrase ATY42_16130 PF13116 ATY42_16130 ATY42_16130 PF13502 ATY42_16130 ATY42_16135 PF00575 S1 RNA binding domain ATY42_16135 PF10150 Ribonuclease E/G family ATY42_16140 PF02545 Maf-like protein ATY42_16145 PF04402 Protein of unknown function (DUF541) ATY42_16150 PF00593 TonB dependent receptor ATY42_16150 PF07715 TonB-dependent Receptor Plug Domain ATY42_16150 PF13620 Carboxypeptidase regulatory-like domain ATY42_16160 PF02590 Predicted SPOUT methyltransferase ATY42_16170 PF05787 Bacterial protein of unknown function (DUF839) ATY42_16180 PF02410 Oligomerisation domain ATY42_16185 PF01467 Cytidylyltransferase ATY42_16190 PF06144 DNA polymerase III, delta subunit ATY42_16195 PF04390 Lipopolysaccharide-assembly ATY42_16200 PF00133 tRNA synthetases class I (I, L, M and V) ATY42_16200 PF08264 Anticodon-binding domain of tRNA ATY42_16200 PF13603 Leucyl-tRNA synthetase, Domain 2 ATY42_16205 PF06197 ATY42_16205 ATY42_16210 PF00085 Thioredoxin ATY42_16210 PF14559 Tetratricopeptide repeat ATY42_16210 PF14561 Tetratricopeptide repeat ATY42_16215 PF14539 Domain of unknown function (DUF4442) ATY42_16220 PF12760 Transposase zinc-ribbon domain ATY42_16220 PF12762 ATY42_16220 ATY42_16225 PF13340 ATY42_16225 ATY42_16230 PF13586 ATY42_16230 ATY42_16245 PF04070 ATY42_16245 ATY42_16250 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ATY42_16260 PF13546 ATY42_16260 ATY42_16265 PF01609 Transposase DDE domain ATY42_16270 PF12760 Transposase zinc-ribbon domain ATY42_16270 PF12762 ATY42_16270 ATY42_16275 PF13340 ATY42_16275 ATY42_16280 PF13586 ATY42_16280 ATY42_16285 PF00128 Alpha amylase, catalytic domain ATY42_16285 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ATY42_16290 PF01609 Transposase DDE domain ATY42_16290 PF05598 ATY42_16290 ATY42_16295 PF01609 Transposase DDE domain ATY42_16295 PF05598 ATY42_16295 ATY42_16300 PF13546 ATY42_16300 ATY42_16305 PF01609 Transposase DDE domain ATY42_16310 PF12760 Transposase zinc-ribbon domain ATY42_16315 PF12762 ATY42_16315 ATY42_16320 PF13936 Helix-turn-helix domain ATY42_16325 PF13586 ATY42_16325 ATY42_16330 PF13340 ATY42_16330 ATY42_16335 PF00665 Integrase core domain ATY42_16340 PF01609 Transposase DDE domain ATY42_16345 PF00816 H-NS histone family ATY42_16355 PF01609 Transposase DDE domain ATY42_16360 PF13683 ATY42_16360 ATY42_16365 PF13276 ATY42_16365 ATY42_16370 PF01527 Transposase ATY42_16375 PF00589 Phage integrase family ATY42_16380 PF12760 Transposase zinc-ribbon domain ATY42_16385 PF12762 ATY42_16385 ATY42_16395 PF00657 GDSL-like Lipase/Acylhydrolase ATY42_16395 PF03797 Autotransporter beta-domain ATY42_16400 PF02597 ThiS family ATY42_16405 PF05690 Thiazole biosynthesis protein ThiG ATY42_16410 PF02390 Putative methyltransferase ATY42_16415 PF02080 TrkA-C domain ATY42_16415 PF03600 Citrate transporter ATY42_16420 PF00355 Rieske [2Fe-2S] domain ATY42_16435 PF01609 Transposase DDE domain ATY42_16440 PF13936 Helix-turn-helix domain ATY42_16445 PF00665 Integrase core domain ATY42_16450 PF01557 Fumarylacetoacetate (FAA) hydrolase family ATY42_16455 PF01741 Large-conductance mechanosensitive channel, MscL ATY42_16460 PF13586 ATY42_16460 ATY42_16465 PF13340 ATY42_16465 ATY42_16475 PF00135 Carboxylesterase family ATY42_16480 PF00588 SpoU rRNA Methylase family ATY42_16480 PF08032 RNA 2'-O ribose methyltransferase substrate binding ATY42_16500 PF12760 Transposase zinc-ribbon domain ATY42_16500 PF12762 ATY42_16500 ATY42_16510 PF01433 Peptidase family M1 ATY42_16510 PF11838 ERAP1-like C-terminal domain ATY42_16515 PF00873 AcrB/AcrD/AcrF family ATY42_16520 PF16576 ATY42_16520 ATY42_16525 PF00009 Elongation factor Tu GTP binding domain ATY42_16525 PF01583 Adenylylsulphate kinase ATY42_16530 PF01507 Phosphoadenosine phosphosulfate reductase family ATY42_16535 PF00175 Oxidoreductase NAD-binding domain ATY42_16535 PF00258 Flavodoxin ATY42_16535 PF00667 FAD binding domain ATY42_16540 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ATY42_16540 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ATY42_16545 PF01507 Phosphoadenosine phosphosulfate reductase family ATY42_16550 PF03929 ATY42_16550 ATY42_16555 PF00593 TonB dependent receptor ATY42_16555 PF07715 TonB-dependent Receptor Plug Domain ATY42_16560 PF11162 ATY42_16560 ATY42_16565 PF01590 GAF domain ATY42_16565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_16575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY42_16575 PF03466 LysR substrate binding domain ATY42_16580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ATY42_16585 PF00291 Pyridoxal-phosphate dependent enzyme ATY42_16595 PF04191 Phospholipid methyltransferase ATY42_16600 PF01661 Macro domain ATY42_16605 PF00274 Fructose-bisphosphate aldolase class-I ATY42_16610 PF00224 Pyruvate kinase, barrel domain ATY42_16610 PF02887 Pyruvate kinase, alpha/beta domain ATY42_16615 PF13419 Haloacid dehalogenase-like hydrolase ATY42_16620 PF00162 Phosphoglycerate kinase ATY42_16625 PF13163 ATY42_16625 ATY42_16630 PF10101 ATY42_16630 ATY42_16650 PF00199 Catalase ATY42_16650 PF06628 Catalase-related immune-responsive ATY42_16665 PF01609 Transposase DDE domain ATY42_16665 PF05598 ATY42_16665 ATY42_16670 PF12760 Transposase zinc-ribbon domain ATY42_16670 PF12762 ATY42_16670 ATY42_16675 PF13358 DDE superfamily endonuclease ATY42_16675 PF13551 Winged helix-turn helix ATY42_16675 PF13592 ATY42_16675 ATY42_16685 PF08448 PAS fold ATY42_16685 PF12833 Helix-turn-helix domain ATY42_16705 PF05598 ATY42_16705 ATY42_16720 PF00326 Prolyl oligopeptidase family ATY42_16720 PF07676 WD40-like Beta Propeller Repeat ATY42_16725 PF13557 ATY42_16725 ATY42_16740 PF01609 Transposase DDE domain ATY42_16740 PF05598 ATY42_16740 ATY42_16745 PF03169 ATY42_16745 ATY42_16750 PF13365 Trypsin-like peptidase domain ATY42_16755 PF08668 HDOD domain ATY42_16760 PF02811 PHP domain ATY42_16760 PF07733 Bacterial DNA polymerase III alpha subunit ATY42_16760 PF14579 Helix-hairpin-helix motif ATY42_16765 PF00817 impB/mucB/samB family ATY42_16775 PF00717 Peptidase S24-like ATY42_16775 PF01726 LexA DNA binding domain ATY42_16780 PF04014 Antidote-toxin recognition MazE ATY42_16785 PF02661 Fic/DOC family ATY42_16805 PF00300 Histidine phosphatase superfamily (branch 1) ATY42_16810 PF00440 Bacterial regulatory proteins, tetR family ATY42_16835 PF00069 Protein kinase domain ATY42_16845 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ATY42_16845 PF04851 Type III restriction enzyme, res subunit ATY42_16845 PF11867 ATY42_16845 ATY42_16855 PF14355 ATY42_16855 ATY42_16860 PF01420 Type I restriction modification DNA specificity domain ATY42_16860 PF01909 Nucleotidyltransferase domain ATY42_16865 PF08780 Nucleotidyltransferase substrate binding protein like ATY42_16870 PF02384 N-6 DNA Methylase ATY42_16870 PF12161 HsdM N-terminal domain ATY42_16875 PF04471 Restriction endonuclease ATY42_16880 PF05016 Plasmid stabilisation system protein ATY42_16890 PF00271 Helicase conserved C-terminal domain ATY42_16890 PF04851 Type III restriction enzyme, res subunit ATY42_16890 PF08463 ATY42_16890 ATY42_16890 PF13643 ATY42_16890 ATY42_16895 PF07751 ATY42_16895 ATY42_16900 PF02384 N-6 DNA Methylase ATY42_16900 PF12161 HsdM N-terminal domain ATY42_16905 PF01420 Type I restriction modification DNA specificity domain ATY42_16920 PF05954 Phage late control gene D protein (GPD) ATY42_16955 PF13503 ATY42_16955 ATY42_16960 PF05954 Phage late control gene D protein (GPD) ATY42_16960 PF10106 ATY42_16960 ATY42_16960 PF13296 ATY42_16960 ATY42_16970 PF00004 ATPase family associated with various cellular activities (AAA) ATY42_16970 PF02861 Clp amino terminal domain ATY42_16970 PF07724 AAA domain (Cdc48 subfamily) ATY42_16970 PF10431 C-terminal, D2-small domain, of ClpB protein ATY42_16975 PF06996 ATY42_16975 ATY42_16980 PF05947 ATY42_16980 ATY42_16985 PF04965 Gene 25-like lysozyme ATY42_16990 PF05638 Protein of unknown function (DUF796) ATY42_16995 PF05943 ATY42_16995 ATY42_17000 PF05591 ATY42_17000 ATY42_17010 PF12790 Type VI secretion lipoprotein ATY42_17015 PF05936 ATY42_17015 ATY42_17020 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) ATY42_17025 PF05954 Phage late control gene D protein (GPD) ATY42_17025 PF10106 ATY42_17025 ATY42_17025 PF13296 ATY42_17025 ATY42_17030 PF05954 Phage late control gene D protein (GPD) ATY42_17030 PF10106 ATY42_17030 ATY42_17030 PF13296 ATY42_17030 ATY42_17035 PF10106 ATY42_17035 ATY42_17040 PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) ATY42_17045 PF11745 ATY42_17045 ATY42_17050 PF13503 ATY42_17050 ATY42_17055 PF05954 Phage late control gene D protein (GPD) ATY42_17055 PF10106 ATY42_17055 ATY42_17055 PF13296 ATY42_17055 ATY42_17060 PF03781 Sulfatase-modifying factor enzyme 1 ATY42_17070 PF10106 ATY42_17070 ATY42_17075 PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) ATY42_17080 PF01610 ATY42_17080 ATY42_17080 PF13542 ATY42_17080 ATY42_17085 PF11745 ATY42_17085 ATY42_17090 PF11745 ATY42_17090 ATY42_17100 PF11745 ATY42_17100 ATY42_17105 PF11745 ATY42_17105 ATY42_17110 PF13503 ATY42_17110 ATY42_17125 PF01609 Transposase DDE domain ATY42_17125 PF05598 ATY42_17125 ATY42_17130 PF01609 Transposase DDE domain ATY42_17130 PF05598 ATY42_17130 ATY42_17140 PF03781 Sulfatase-modifying factor enzyme 1 ATY42_17150 PF05954 Phage late control gene D protein (GPD) ATY42_17150 PF10106 ATY42_17150 ATY42_17150 PF13296 ATY42_17150 ATY42_17160 PF06812 ATY42_17160 ATY42_17165 PF00691 OmpA family ATY42_17170 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) ATY42_17175 PF06744 ATY42_17175 ATY42_17175 PF06761 ATY42_17175 ATY42_17175 PF14331 ATY42_17175 ATY42_17185 PF05488 PAAR motif ATY42_17190 PF13539 D-alanyl-D-alanine carboxypeptidase ATY42_17200 PF01527 Transposase ATY42_17200 PF13359 ATY42_17200 ATY42_17205 PF02222 ATP-grasp domain ATY42_17220 PF03869 Arc-like DNA binding domain ATY42_17225 PF02557 D-alanyl-D-alanine carboxypeptidase ATY42_17230 PF00730 HhH-GPD superfamily base excision DNA repair protein ATY42_17235 PF04241 ATY42_17235 ATY42_17245 PF04241 ATY42_17245 ATY42_17250 PF10604 Polyketide cyclase / dehydrase and lipid transport ATY42_17255 PF00072 Response regulator receiver domain ATY42_17255 PF00196 Bacterial regulatory proteins, luxR family ATY42_17260 PF07730 Histidine kinase ATY42_17265 PF00583 Acetyltransferase (GNAT) family ATY42_17270 PF03775 Septum formation inhibitor MinC, C-terminal domain ATY42_17270 PF05209 Septum formation inhibitor MinC, N-terminal domain ATY42_17275 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ATY42_17280 PF03776 Septum formation topological specificity factor MinE ATY42_17290 PF00512 His Kinase A (phospho-acceptor) domain ATY42_17290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_17295 PF00072 Response regulator receiver domain ATY42_17295 PF00486 Transcriptional regulatory protein, C terminal ATY42_17300 PF13231 ATY42_17300 ATY42_17305 PF01569 PAP2 superfamily ATY42_17310 PF00884 Sulfatase ATY42_17310 PF08019 ATY42_17310 ATY42_17315 PF01401 Angiotensin-converting enzyme ATY42_17330 PF00005 ABC transporter ATY42_17330 PF00664 ABC transporter transmembrane region ATY42_17330 PF03412 Peptidase C39 family ATY42_17335 PF13437 HlyD family secretion protein ATY42_17335 PF13533 Biotin-lipoyl like ATY42_17340 PF13469 Sulfotransferase family ATY42_17350 PF02347 Glycine cleavage system P-protein ATY42_17360 PF08774 VRR-NUC domain ATY42_17365 PF11876 ATY42_17365 ATY42_17370 PF11876 ATY42_17370 ATY42_17385 PF01527 Transposase ATY42_17390 PF13936 Helix-turn-helix domain ATY42_17395 PF13340 ATY42_17395 ATY42_17400 PF13586 ATY42_17400 ATY42_17405 PF13358 DDE superfamily endonuclease ATY42_17405 PF13551 Winged helix-turn helix ATY42_17405 PF13592 ATY42_17405 ATY42_17410 PF01196 Ribosomal protein L17 ATY42_17415 PF01000 RNA polymerase Rpb3/RpoA insert domain ATY42_17415 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ATY42_17415 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ATY42_17420 PF00163 Ribosomal protein S4/S9 N-terminal domain ATY42_17420 PF01479 S4 domain ATY42_17425 PF00411 Ribosomal protein S11 ATY42_17430 PF00416 Ribosomal protein S13/S18 ATY42_17435 PF00344 SecY translocase ATY42_17440 PF00828 Ribosomal protein L18e/L15 ATY42_17445 PF00327 Ribosomal protein L30p/L7e ATY42_17450 PF00333 Ribosomal protein S5, N-terminal domain ATY42_17450 PF03719 Ribosomal protein S5, C-terminal domain ATY42_17455 PF00861 Ribosomal L18p/L5e family ATY42_17460 PF00347 Ribosomal protein L6 ATY42_17465 PF00410 Ribosomal protein S8 ATY42_17470 PF00253 Ribosomal protein S14p/S29e ATY42_17475 PF00281 Ribosomal protein L5 ATY42_17475 PF00673 ribosomal L5P family C-terminus ATY42_17480 PF00467 KOW motif ATY42_17480 PF17136 ATY42_17480 ATY42_17485 PF00238 Ribosomal protein L14p/L23e ATY42_17490 PF00366 Ribosomal protein S17 ATY42_17495 PF00831 Ribosomal L29 protein ATY42_17500 PF00252 Ribosomal protein L16p/L10e ATY42_17505 PF00189 Ribosomal protein S3, C-terminal domain ATY42_17505 PF07650 KH domain ATY42_17510 PF00237 Ribosomal protein L22p/L17e ATY42_17515 PF00203 Ribosomal protein S19 ATY42_17520 PF00181 Ribosomal Proteins L2, RNA binding domain ATY42_17520 PF03947 Ribosomal Proteins L2, C-terminal domain ATY42_17525 PF00276 Ribosomal protein L23 ATY42_17530 PF00573 Ribosomal protein L4/L1 family ATY42_17535 PF00297 Ribosomal protein L3 ATY42_17540 PF00338 Ribosomal protein S10p/S20e ATY42_17545 PF00009 Elongation factor Tu GTP binding domain ATY42_17545 PF03143 Elongation factor Tu C-terminal domain ATY42_17545 PF03144 Elongation factor Tu domain 2 ATY42_17550 PF00009 Elongation factor Tu GTP binding domain ATY42_17550 PF00679 Elongation factor G C-terminus ATY42_17550 PF03144 Elongation factor Tu domain 2 ATY42_17550 PF03764 Elongation factor G, domain IV ATY42_17550 PF14492 Elongation Factor G, domain II ATY42_17555 PF00177 Ribosomal protein S7p/S5e ATY42_17560 PF00164 Ribosomal protein S12/S23 ATY42_17565 PF00623 RNA polymerase Rpb1, domain 2 ATY42_17565 PF04983 RNA polymerase Rpb1, domain 3 ATY42_17565 PF04997 RNA polymerase Rpb1, domain 1 ATY42_17565 PF04998 RNA polymerase Rpb1, domain 5 ATY42_17565 PF05000 RNA polymerase Rpb1, domain 4 ATY42_17570 PF00562 RNA polymerase Rpb2, domain 6 ATY42_17570 PF04560 RNA polymerase Rpb2, domain 7 ATY42_17570 PF04561 RNA polymerase Rpb2, domain 2 ATY42_17570 PF04563 RNA polymerase beta subunit ATY42_17570 PF04565 RNA polymerase Rpb2, domain 3 ATY42_17570 PF10385 RNA polymerase beta subunit external 1 domain ATY42_17575 PF00542 Ribosomal protein L7/L12 C-terminal domain ATY42_17575 PF16320 ATY42_17575 ATY42_17580 PF00466 Ribosomal protein L10 ATY42_17585 PF00687 Ribosomal protein L1p/L10e family ATY42_17590 PF00298 Ribosomal protein L11, RNA binding domain ATY42_17590 PF03946 Ribosomal protein L11, N-terminal domain ATY42_17595 PF00467 KOW motif ATY42_17595 PF02357 Transcription termination factor nusG ATY42_17600 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ATY42_17610 PF00009 Elongation factor Tu GTP binding domain ATY42_17610 PF03143 Elongation factor Tu C-terminal domain ATY42_17610 PF03144 Elongation factor Tu domain 2 ATY42_17630 PF01926 50S ribosome-binding GTPase ATY42_17630 PF06071 Protein of unknown function (DUF933) ATY42_17635 PF01195 Peptidyl-tRNA hydrolase ATY42_17640 PF01386 Ribosomal L25p family ATY42_17640 PF14693 Ribosomal protein TL5, C-terminal domain ATY42_17645 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ATY42_17645 PF14572 Phosphoribosyl synthetase-associated domain ATY42_17655 PF00288 GHMP kinases N terminal domain ATY42_17655 PF08544 GHMP kinases C terminal ATY42_17660 PF03550 Outer membrane lipoprotein LolB ATY42_17665 PF13429 Tetratricopeptide repeat ATY42_17670 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ATY42_17670 PF01488 Shikimate / quinate 5-dehydrogenase ATY42_17670 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ATY42_17675 PF00472 RF-1 domain ATY42_17675 PF03462 PCRF domain ATY42_17680 PF13844 Glycosyl transferase family 41 ATY42_17680 PF14559 Tetratricopeptide repeat ATY42_17685 PF00994 Probable molybdopterin binding domain ATY42_17690 PF03976 Polyphosphate kinase 2 (PPK2) ATY42_17700 PF00708 Acylphosphatase ATY42_17705 PF00578 AhpC/TSA family ATY42_17710 PF03631 ATY42_17710 ATY42_17715 PF03358 NADPH-dependent FMN reductase ATY42_17720 PF09842 ATY42_17720 ATY42_17725 PF02055 O-Glycosyl hydrolase family 30 ATY42_17725 PF17189 ATY42_17725 ATY42_17730 PF00710 Asparaginase ATY42_17735 PF04073 Aminoacyl-tRNA editing domain ATY42_17745 PF01063 Aminotransferase class IV ATY42_17750 PF01883 Domain of unknown function DUF59 ATY42_17765 PF13340 ATY42_17765 ATY42_17770 PF01609 Transposase DDE domain ATY42_17775 PF02233 NAD(P) transhydrogenase beta subunit ATY42_17780 PF12769 Domain of unknown function (DUF3814) ATY42_17785 PF04542 Sigma-70 region 2 ATY42_17785 PF08281 Sigma-70, region 4 ATY42_17795 PF11304 ATY42_17795 ATY42_17800 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ATY42_17800 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ATY42_17805 PF07793 ATY42_17805 ATY42_17810 PF00881 Nitroreductase family ATY42_17815 PF01367 5'-3' exonuclease, C-terminal SAM fold ATY42_17815 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ATY42_17820 PF00293 NUDIX domain ATY42_17825 PF05013 N-formylglutamate amidohydrolase ATY42_17830 PF00561 alpha/beta hydrolase fold ATY42_17855 PF00665 Integrase core domain ATY42_17855 PF13936 Helix-turn-helix domain ATY42_17860 PF05175 Methyltransferase small domain ATY42_17865 PF00578 AhpC/TSA family ATY42_17865 PF10417 C-terminal domain of 1-Cys peroxiredoxin ATY42_17870 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY42_17870 PF13192 Thioredoxin domain ATY42_17875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY42_17875 PF03466 LysR substrate binding domain ATY42_17880 PF01272 Transcription elongation factor, GreA/GreB, C-term ATY42_17880 PF14760 Rnk N-terminus ATY42_17885 PF00923 Transaldolase ATY42_17890 PF12760 Transposase zinc-ribbon domain ATY42_17890 PF12762 ATY42_17890 ATY42_17900 PF01965 DJ-1/PfpI family ATY42_17905 PF01625 Peptide methionine sulfoxide reductase ATY42_17910 PF08332 Calcium/calmodulin dependent protein kinase II Association ATY42_17920 PF01609 Transposase DDE domain ATY42_17930 PF13340 ATY42_17930 ATY42_17935 PF02627 Carboxymuconolactone decarboxylase family ATY42_17940 PF00462 Glutaredoxin ATY42_17945 PF01435 Peptidase family M48 ATY42_17950 PF00072 Response regulator receiver domain ATY42_17950 PF00486 Transcriptional regulatory protein, C terminal ATY42_17955 PF00512 His Kinase A (phospho-acceptor) domain ATY42_17955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_17955 PF11808 ATY42_17955 ATY42_17960 PF02503 Polyphosphate kinase middle domain ATY42_17960 PF13089 Polyphosphate kinase N-terminal domain ATY42_17960 PF13090 Polyphosphate kinase C-terminal domain ATY42_17965 PF02541 Ppx/GppA phosphatase family ATY42_17970 PF00534 Glycosyl transferases group 1 ATY42_17970 PF13439 Glycosyltransferase Family 4 ATY42_17975 PF01569 PAP2 superfamily ATY42_17980 PF00149 Calcineurin-like phosphoesterase ATY42_17990 PF04305 ATY42_17990 ATY42_17995 PF13522 Glutamine amidotransferase domain ATY42_18000 PF02674 ATY42_18000 ATY42_18005 PF05036 Sporulation related domain ATY42_18010 PF08245 Mur ligase middle domain ATY42_18015 PF00300 Histidine phosphatase superfamily (branch 1) ATY42_18020 PF10459 Peptidase S46 ATY42_18025 PF04185 Phosphoesterase family ATY42_18025 PF05506 ATY42_18025 ATY42_18030 PF00593 TonB dependent receptor ATY42_18030 PF07715 TonB-dependent Receptor Plug Domain ATY42_18035 PF00107 Zinc-binding dehydrogenase ATY42_18035 PF08240 Alcohol dehydrogenase GroES-like domain ATY42_18040 PF09694 ATY42_18040 ATY42_18045 PF00005 ABC transporter ATY42_18045 PF12857 ATY42_18045 ATY42_18050 PF00528 Binding-protein-dependent transport system inner membrane component ATY42_18055 PF00528 Binding-protein-dependent transport system inner membrane component ATY42_18060 PF13531 Bacterial extracellular solute-binding protein ATY42_18065 PF00155 Aminotransferase class I and II ATY42_18075 PF00849 RNA pseudouridylate synthase ATY42_18075 PF01479 S4 domain ATY42_18085 PF00691 OmpA family ATY42_18085 PF13505 Outer membrane protein beta-barrel domain ATY42_18090 PF08240 Alcohol dehydrogenase GroES-like domain ATY42_18090 PF13602 Zinc-binding dehydrogenase ATY42_18095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ATY42_18095 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY42_18105 PF01527 Transposase ATY42_18130 PF01609 Transposase DDE domain ATY42_18135 PF00072 Response regulator receiver domain ATY42_18135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_18140 PF00072 Response regulator receiver domain ATY42_18145 PF09413 Domain of unknown function (DUF2007) ATY42_18150 PF13409 Glutathione S-transferase, N-terminal domain ATY42_18160 PF00749 tRNA synthetases class I (E and Q), catalytic domain ATY42_18160 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ATY42_18175 PF13586 ATY42_18175 ATY42_18180 PF13340 ATY42_18180 ATY42_18190 PF01609 Transposase DDE domain ATY42_18210 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ATY42_18215 PF01728 FtsJ-like methyltransferase ATY42_18220 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ATY42_18225 PF08450 SMP-30/Gluconolaconase/LRE-like region ATY42_18235 PF13202 EF hand ATY42_18240 PF12802 MarR family ATY42_18245 PF00378 Enoyl-CoA hydratase/isomerase family ATY42_18250 PF00171 Aldehyde dehydrogenase family ATY42_18255 PF00501 AMP-binding enzyme ATY42_18255 PF13193 AMP-binding enzyme C-terminal domain ATY42_18260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY42_18260 PF03466 LysR substrate binding domain ATY42_18270 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ATY42_18280 PF13358 DDE superfamily endonuclease ATY42_18285 PF12760 Transposase zinc-ribbon domain ATY42_18285 PF12762 ATY42_18285 ATY42_18290 PF13551 Winged helix-turn helix ATY42_18290 PF13592 ATY42_18290 ATY42_18300 PF01494 FAD binding domain ATY42_18305 PF01494 FAD binding domain ATY42_18315 PF01923 Cobalamin adenosyltransferase ATY42_18320 PF00850 Histone deacetylase domain ATY42_18325 PF03968 OstA-like protein ATY42_18325 PF04453 Organic solvent tolerance protein ATY42_18330 PF00639 PPIC-type PPIASE domain ATY42_18330 PF09312 SurA N-terminal domain ATY42_18330 PF13616 PPIC-type PPIASE domain ATY42_18335 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ATY42_18340 PF00398 Ribosomal RNA adenine dimethylase ATY42_18345 PF04379 Protein of unknown function (DUF525) ATY42_18350 PF00149 Calcineurin-like phosphoesterase ATY42_18355 PF00186 Dihydrofolate reductase ATY42_18365 PF00303 Thymidylate synthase ATY42_18370 PF01790 ATY42_18370 ATY42_18375 PF04536 TLP18 ATY42_18380 PF04536 TLP18 ATY42_18385 PF04011 LemA family ATY42_18390 PF01219 Prokaryotic diacylglycerol kinase ATY42_18400 PF00512 His Kinase A (phospho-acceptor) domain ATY42_18400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_18405 PF00072 Response regulator receiver domain ATY42_18405 PF00486 Transcriptional regulatory protein, C terminal ATY42_18410 PF13472 GDSL-like Lipase/Acylhydrolase family ATY42_18415 PF00005 ABC transporter ATY42_18420 PF02687 ATY42_18420 ATY42_18425 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ATY42_18435 PF00005 ABC transporter ATY42_18445 PF04342 ATY42_18445 ATY42_18455 PF10636 Hemin uptake protein hemP ATY42_18460 PF00248 Aldo/keto reductase family ATY42_18470 PF01773 Na+ dependent nucleoside transporter N-terminus ATY42_18470 PF07662 Na+ dependent nucleoside transporter C-terminus ATY42_18470 PF07670 Nucleoside recognition ATY42_18475 PF00294 pfkB family carbohydrate kinase ATY42_18485 PF08306 Glycosyl hydrolase family 98 ATY42_18485 PF08307 Glycosyl hydrolase family 98 C-terminal domain ATY42_18485 PF16990 ATY42_18485 ATY42_18490 PF01207 Dihydrouridine synthase (Dus) ATY42_18495 PF08241 Methyltransferase domain ATY42_18505 PF00438 S-adenosylmethionine synthetase, N-terminal domain ATY42_18505 PF02772 S-adenosylmethionine synthetase, central domain ATY42_18505 PF02773 S-adenosylmethionine synthetase, C-terminal domain ATY42_18510 PF13586 ATY42_18510 ATY42_18515 PF13340 ATY42_18515 ATY42_18520 PF00328 Histidine phosphatase superfamily (branch 2) ATY42_18525 PF00593 TonB dependent receptor ATY42_18525 PF07715 TonB-dependent Receptor Plug Domain ATY42_18535 PF13546 ATY42_18535 ATY42_18540 PF00440 Bacterial regulatory proteins, tetR family ATY42_18545 PF00311 Phosphoenolpyruvate carboxylase ATY42_18550 PF00326 Prolyl oligopeptidase family ATY42_18555 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ATY42_18555 PF05221 S-adenosyl-L-homocysteine hydrolase ATY42_18560 PF13649 Methyltransferase domain ATY42_18565 PF00685 Sulfotransferase domain ATY42_18575 PF11539 Protein of unknown function (DUF3228) ATY42_18580 PF09831 ATY42_18580 ATY42_18590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ATY42_18605 PF00082 Subtilase family ATY42_18610 PF08240 Alcohol dehydrogenase GroES-like domain ATY42_18610 PF13602 Zinc-binding dehydrogenase ATY42_18620 PF02219 Methylenetetrahydrofolate reductase ATY42_18630 PF13358 DDE superfamily endonuclease ATY42_18630 PF13551 Winged helix-turn helix ATY42_18630 PF13592 ATY42_18630 ATY42_18635 PF00293 NUDIX domain ATY42_18635 PF02581 Thiamine monophosphate synthase/TENI ATY42_18645 PF01043 SecA preprotein cross-linking domain ATY42_18645 PF02810 SEC-C motif ATY42_18645 PF07516 SecA Wing and Scaffold domain ATY42_18645 PF07517 SecA DEAD-like domain ATY42_18650 PF01551 Peptidase family M23 ATY42_18655 PF05258 ATY42_18655 ATY42_18660 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ATY42_18665 PF00091 Tubulin/FtsZ family, GTPase domain ATY42_18665 PF12327 FtsZ family, C-terminal domain ATY42_18670 PF02491 SHS2 domain inserted in FTSA ATY42_18670 PF14450 Cell division protein FtsA ATY42_18675 PF03799 Cell division protein FtsQ ATY42_18675 PF08478 POTRA domain, FtsQ-type ATY42_18680 PF01820 D-ala D-ala ligase N-terminus ATY42_18680 PF07478 D-ala D-ala ligase C-terminus ATY42_18685 PF01225 Mur ligase family, catalytic domain ATY42_18685 PF02875 Mur ligase family, glutamate ligase domain ATY42_18685 PF08245 Mur ligase middle domain ATY42_18690 PF03033 Glycosyltransferase family 28 N-terminal domain ATY42_18690 PF04101 Glycosyltransferase family 28 C-terminal domain ATY42_18695 PF01098 ATY42_18695 ATY42_18700 PF00953 Glycosyl transferase family 4 ATY42_18705 PF01225 Mur ligase family, catalytic domain ATY42_18705 PF02875 Mur ligase family, glutamate ligase domain ATY42_18705 PF08245 Mur ligase middle domain ATY42_18710 PF01225 Mur ligase family, catalytic domain ATY42_18710 PF02875 Mur ligase family, glutamate ligase domain ATY42_18710 PF08245 Mur ligase middle domain ATY42_18715 PF00905 Penicillin binding protein transpeptidase domain ATY42_18715 PF03717 Penicillin-binding Protein dimerisation domain ATY42_18720 PF04999 ATY42_18720 ATY42_18725 PF01795 MraW methylase family ATY42_18730 PF02381 MraZ protein ATY42_18735 PF05742 ATY42_18735 ATY42_18745 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ATY42_18750 PF04348 LppC putative lipoprotein ATY42_18755 PF02021 Uncharacterised protein family UPF0102 ATY42_18760 PF04307 ATY42_18760 ATY42_18765 PF01565 FAD binding domain ATY42_18765 PF02913 FAD linked oxidases, C-terminal domain ATY42_18770 PF00072 Response regulator receiver domain ATY42_18770 PF00486 Transcriptional regulatory protein, C terminal ATY42_18775 PF00512 His Kinase A (phospho-acceptor) domain ATY42_18775 PF00582 Universal stress protein family ATY42_18775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_18775 PF02702 Osmosensitive K+ channel His kinase sensor domain ATY42_18775 PF13493 Domain of unknown function (DUF4118) ATY42_18780 PF02669 ATY42_18780 ATY42_18785 PF00122 E1-E2 ATPase ATY42_18785 PF00702 haloacid dehalogenase-like hydrolase ATY42_18790 PF03814 ATY42_18790 ATY42_18795 PF09604 ATY42_18795 ATY42_18805 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ATY42_18810 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ATY42_18815 PF00586 AIR synthase related protein, N-terminal domain ATY42_18815 PF02769 AIR synthase related protein, C-terminal domain ATY42_18820 PF01029 NusB family ATY42_18825 PF00885 6,7-dimethyl-8-ribityllumazine synthase ATY42_18830 PF00925 GTP cyclohydrolase II ATY42_18830 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ATY42_18835 PF00677 Lumazine binding domain ATY42_18845 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ATY42_18845 PF01872 RibD C-terminal domain ATY42_18850 PF13673 Acetyltransferase (GNAT) domain ATY42_18855 PF03477 ATP cone domain ATY42_18865 PF00464 Serine hydroxymethyltransferase ATY42_18870 PF00593 TonB dependent receptor ATY42_18870 PF07715 TonB-dependent Receptor Plug Domain ATY42_18880 PF11776 Domain of unknown function (DUF3315) ATY42_18885 PF00005 ABC transporter ATY42_18885 PF12848 ABC transporter ATY42_18895 PF14329 ATY42_18895 ATY42_18900 PF14329 ATY42_18900 ATY42_18905 PF00756 Putative esterase ATY42_18915 PF00107 Zinc-binding dehydrogenase ATY42_18915 PF08240 Alcohol dehydrogenase GroES-like domain ATY42_18920 PF02583 Metal-sensitive transcriptional repressor ATY42_18925 PF00534 Glycosyl transferases group 1 ATY42_18930 PF00072 Response regulator receiver domain ATY42_18930 PF00486 Transcriptional regulatory protein, C terminal ATY42_18935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_18960 PF13546 ATY42_18960 ATY42_18970 PF04107 Glutamate-cysteine ligase family 2(GCS2) ATY42_18975 PF01988 ATY42_18975 ATY42_18980 PF01609 Transposase DDE domain ATY42_18985 PF01926 50S ribosome-binding GTPase ATY42_18990 PF00034 Cytochrome c ATY42_18995 PF13462 Thioredoxin ATY42_19000 PF01323 DSBA-like thioredoxin domain ATY42_19005 PF03372 Endonuclease/Exonuclease/phosphatase family ATY42_19010 PF02028 BCCT family transporter ATY42_19020 PF01527 Transposase ATY42_19025 PF01609 Transposase DDE domain ATY42_19025 PF05598 ATY42_19025 ATY42_19030 PF00291 Pyridoxal-phosphate dependent enzyme ATY42_19030 PF01053 Cys/Met metabolism PLP-dependent enzyme ATY42_19035 PF13340 ATY42_19035 ATY42_19040 PF13586 ATY42_19040 ATY42_19045 PF01609 Transposase DDE domain ATY42_19045 PF05598 ATY42_19045 ATY42_19050 PF01527 Transposase ATY42_19060 PF01609 Transposase DDE domain ATY42_19065 PF01609 Transposase DDE domain ATY42_19070 PF01743 Poly A polymerase head domain ATY42_19070 PF01966 HD domain ATY42_19070 PF12627 Probable RNA and SrmB- binding site of polymerase A ATY42_19075 PF12760 Transposase zinc-ribbon domain ATY42_19075 PF12762 ATY42_19075 ATY42_19080 PF13936 Helix-turn-helix domain ATY42_19085 PF01609 Transposase DDE domain ATY42_19085 PF05598 ATY42_19085 ATY42_19090 PF13340 ATY42_19090 ATY42_19095 PF13586 ATY42_19095 ATY42_19105 PF12760 Transposase zinc-ribbon domain ATY42_19105 PF12762 ATY42_19105 ATY42_19115 PF01610 ATY42_19115 ATY42_19115 PF13542 ATY42_19115 ATY42_19120 PF14559 Tetratricopeptide repeat ATY42_19125 PF01522 Polysaccharide deacetylase ATY42_19125 PF14883 Hypothetical glycosyl hydrolase family 13 ATY42_19130 PF13641 Glycosyltransferase like family 2 ATY42_19135 PF13994 ATY42_19135 ATY42_19140 PF01979 Amidohydrolase family ATY42_19145 PF01380 SIS domain ATY42_19150 PF00356 Bacterial regulatory proteins, lacI family ATY42_19150 PF13377 Periplasmic binding protein-like domain ATY42_19155 PF07690 Major Facilitator Superfamily ATY42_19160 PF00392 Bacterial regulatory proteins, gntR family ATY42_19160 PF07702 UTRA domain ATY42_19165 PF07786 ATY42_19165 ATY42_19175 PF00703 Glycosyl hydrolases family 2 ATY42_19175 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ATY42_19175 PF02837 Glycosyl hydrolases family 2, sugar binding domain ATY42_19175 PF16355 ATY42_19175 ATY42_19180 PF00593 TonB dependent receptor ATY42_19180 PF07715 TonB-dependent Receptor Plug Domain ATY42_19200 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase ATY42_19205 PF13561 Enoyl-(Acyl carrier protein) reductase ATY42_19210 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ATY42_19215 PF00072 Response regulator receiver domain ATY42_19215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_19220 PF00072 Response regulator receiver domain ATY42_19225 PF00512 His Kinase A (phospho-acceptor) domain ATY42_19225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_19225 PF05227 CHASE3 domain ATY42_19225 PF13188 PAS domain ATY42_19230 PF04972 BON domain ATY42_19235 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ATY42_19235 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ATY42_19240 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ATY42_19240 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ATY42_19250 PF05433 ATY42_19250 ATY42_19255 PF10001 ATY42_19255 ATY42_19265 PF01555 DNA methylase ATY42_19275 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ATY42_19280 PF00293 NUDIX domain ATY42_19280 PF01467 Cytidylyltransferase ATY42_19285 PF03372 Endonuclease/Exonuclease/phosphatase family ATY42_19290 PF00595 PDZ domain (Also known as DHR or GLGF) ATY42_19290 PF03572 Peptidase family S41 ATY42_19290 PF11818 ATY42_19290 ATY42_19295 PF04055 Radical SAM superfamily ATY42_19295 PF16881 ATY42_19295 ATY42_19300 PF03099 Biotin/lipoate A/B protein ligase family ATY42_19305 PF04359 Protein of unknown function (DUF493) ATY42_19315 PF00768 D-alanyl-D-alanine carboxypeptidase ATY42_19315 PF07943 Penicillin-binding protein 5, C-terminal domain ATY42_19325 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel ATY42_19325 PF05036 Sporulation related domain ATY42_19330 PF13406 Transglycosylase SLT domain ATY42_19350 PF13936 Helix-turn-helix domain ATY42_19365 PF01098 ATY42_19365 ATY42_19370 PF00905 Penicillin binding protein transpeptidase domain ATY42_19370 PF03717 Penicillin-binding Protein dimerisation domain ATY42_19375 PF04093 ATY42_19375 ATY42_19380 PF04085 rod shape-determining protein MreC ATY42_19385 PF06723 MreB/Mbl protein ATY42_19390 PF00294 pfkB family carbohydrate kinase ATY42_19405 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ATY42_19410 PF13673 Acetyltransferase (GNAT) domain ATY42_19420 PF13518 Helix-turn-helix domain ATY42_19425 PF16576 ATY42_19425 ATY42_19435 PF01209 ubiE/COQ5 methyltransferase family ATY42_19440 PF00990 GGDEF domain ATY42_19445 PF01433 Peptidase family M1 ATY42_19445 PF09127 Leukotriene A4 hydrolase, C-terminal ATY42_19455 PF00702 haloacid dehalogenase-like hydrolase ATY42_19460 PF00004 ATPase family associated with various cellular activities (AAA) ATY42_19460 PF07724 AAA domain (Cdc48 subfamily) ATY42_19460 PF10431 C-terminal, D2-small domain, of ClpB protein ATY42_19465 PF00227 Proteasome subunit ATY42_19470 PF00589 Phage integrase family ATY42_19470 PF02899 Phage integrase, N-terminal SAM-like domain ATY42_19475 PF04340 Protein of unknown function, DUF484 ATY42_19480 PF01678 Diaminopimelate epimerase ATY42_19485 PF13627 ATY42_19485 ATY42_19490 PF04304 ATY42_19490 ATY42_19495 PF00326 Prolyl oligopeptidase family ATY42_19495 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ATY42_19500 PF00155 Aminotransferase class I and II ATY42_19510 PF00326 Prolyl oligopeptidase family ATY42_19510 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ATY42_19520 PF08212 Lipocalin-like domain ATY42_19525 PF08279 HTH domain ATY42_19525 PF13280 ATY42_19525 ATY42_19530 PF04338 Protein of unknown function, DUF481 ATY42_19535 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ATY42_19535 PF03900 Porphobilinogen deaminase, C-terminal domain ATY42_19540 PF00072 Response regulator receiver domain ATY42_19540 PF04397 LytTr DNA-binding domain ATY42_19545 PF06580 ATY42_19545 ATY42_19550 PF02230 Phospholipase/Carboxylesterase ATY42_19555 PF13632 Glycosyl transferase family group 2 ATY42_19560 PF02225 PA domain ATY42_19560 PF04389 Peptidase family M28 ATY42_19565 PF00990 GGDEF domain ATY42_19575 PF00916 ATY42_19575 ATY42_19575 PF01740 STAS domain ATY42_19580 PF00150 Cellulase (glycosyl hydrolase family 5) ATY42_19580 PF00553 Cellulose binding domain ATY42_19595 PF00990 GGDEF domain ATY42_19595 PF01590 GAF domain ATY42_19595 PF08447 PAS fold ATY42_19595 PF08448 PAS fold ATY42_19600 PF00675 Insulinase (Peptidase family M16) ATY42_19600 PF05193 Peptidase M16 inactive domain ATY42_19605 PF01590 GAF domain ATY42_19615 PF13586 ATY42_19615 ATY42_19620 PF13340 ATY42_19620 ATY42_19635 PF01904 Protein of unknown function DUF72 ATY42_19640 PF01204 Trehalase ATY42_19645 PF01382 Avidin family ATY42_19655 PF01987 Mitochondrial biogenesis AIM24 ATY42_19660 PF01544 CorA-like Mg2+ transporter protein ATY42_19670 PF00324 Amino acid permease ATY42_19675 PF01341 Glycosyl hydrolases family 6 ATY42_19680 PF00150 Cellulase (glycosyl hydrolase family 5) ATY42_19685 PF00892 EamA-like transporter family ATY42_19690 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ATY42_19700 PF13518 Helix-turn-helix domain ATY42_19705 PF13358 DDE superfamily endonuclease ATY42_19710 PF07759 ATY42_19710 ATY42_19725 PF08887 ATY42_19725 ATY42_19730 PF00326 Prolyl oligopeptidase family ATY42_19730 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ATY42_19735 PF00326 Prolyl oligopeptidase family ATY42_19745 PF00106 short chain dehydrogenase ATY42_19745 PF13561 Enoyl-(Acyl carrier protein) reductase ATY42_19760 PF01527 Transposase ATY42_19765 PF01212 Beta-eliminating lyase ATY42_19770 PF00425 chorismate binding enzyme ATY42_19770 PF04715 Anthranilate synthase component I, N terminal region ATY42_19775 PF00781 Diacylglycerol kinase catalytic domain ATY42_19780 PF00583 Acetyltransferase (GNAT) family ATY42_19785 PF00834 Ribulose-phosphate 3 epimerase family ATY42_19790 PF00226 DnaJ domain ATY42_19800 PF01936 NYN domain ATY42_19810 PF07504 Fungalysin/Thermolysin Propeptide Motif ATY42_19815 PF01447 Thermolysin metallopeptidase, catalytic domain ATY42_19815 PF02868 Thermolysin metallopeptidase, alpha-helical domain ATY42_19820 PF02868 Thermolysin metallopeptidase, alpha-helical domain ATY42_19825 PF06127 ATY42_19825 ATY42_19835 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains ATY42_19835 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ATY42_19835 PF04039 ATY42_19835 ATY42_19835 PF13244 ATY42_19835 ATY42_19840 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ATY42_19845 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains ATY42_19850 PF01899 ATY42_19850 ATY42_19855 PF04066 ATY42_19855 ATY42_19860 PF03334 ATY42_19860 ATY42_19865 PF01609 Transposase DDE domain ATY42_19865 PF05598 ATY42_19865 ATY42_19870 PF04209 homogentisate 1,2-dioxygenase ATY42_19875 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ATY42_19875 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ATY42_19880 PF12802 MarR family ATY42_19885 PF13899 Thioredoxin-like ATY42_19890 PF00854 POT family ATY42_19895 PF03301 Tryptophan 2,3-dioxygenase ATY42_19910 PF12760 Transposase zinc-ribbon domain ATY42_19910 PF12762 ATY42_19910 ATY42_19920 PF07653 Variant SH3 domain ATY42_19925 PF13586 ATY42_19925 ATY42_19930 PF13340 ATY42_19930 ATY42_19940 PF00108 Thiolase, N-terminal domain ATY42_19940 PF02803 Thiolase, C-terminal domain ATY42_19950 PF07219 ATY42_19950 ATY42_19955 PF04375 ATY42_19955 ATY42_19960 PF02602 Uroporphyrinogen-III synthase HemD ATY42_19965 PF01755 ATY42_19965 ATY42_19970 PF01609 Transposase DDE domain ATY42_19985 PF13546 ATY42_19985 ATY42_19990 PF01609 Transposase DDE domain ATY42_19990 PF05598 ATY42_19990 ATY42_19995 PF13419 Haloacid dehalogenase-like hydrolase ATY42_20000 PF13202 EF hand ATY42_20005 PF13202 EF hand ATY42_20015 PF14255 ATY42_20015 ATY42_20020 PF01427 D-ala-D-ala dipeptidase ATY42_20025 PF01510 N-acetylmuramoyl-L-alanine amidase ATY42_20030 PF00877 NlpC/P60 family ATY42_20030 PF12913 SH3 domain of the SH3b1 type ATY42_20030 PF12914 SH3 domain of SH3b2 type ATY42_20035 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ATY42_20035 PF13378 Enolase C-terminal domain-like ATY42_20040 PF01609 Transposase DDE domain ATY42_20045 PF01609 Transposase DDE domain ATY42_20050 PF12760 Transposase zinc-ribbon domain ATY42_20050 PF12762 ATY42_20050 ATY42_20055 PF13586 ATY42_20055 ATY42_20060 PF13340 ATY42_20060 ATY42_20070 PF13520 Amino acid permease ATY42_20075 PF13586 ATY42_20075 ATY42_20080 PF01610 ATY42_20080 ATY42_20080 PF13542 ATY42_20080 ATY42_20085 PF13340 ATY42_20085 ATY42_20100 PF05360 ATY42_20100 ATY42_20105 PF07995 Glucose / Sorbosone dehydrogenase ATY42_20115 PF13551 Winged helix-turn helix ATY42_20115 PF13592 ATY42_20115 ATY42_20120 PF12760 Transposase zinc-ribbon domain ATY42_20120 PF12762 ATY42_20120 ATY42_20135 PF00665 Integrase core domain ATY42_20140 PF00933 Glycosyl hydrolase family 3 N terminal domain ATY42_20140 PF01915 Glycosyl hydrolase family 3 C-terminal domain ATY42_20140 PF14310 Fibronectin type III-like domain ATY42_20145 PF02152 Dihydroneopterin aldolase ATY42_20150 PF00814 Glycoprotease family ATY42_20155 PF01165 Ribosomal protein S21 ATY42_20160 PF09424 Yqey-like protein ATY42_20165 PF03631 ATY42_20165 ATY42_20170 PF01807 CHC2 zinc finger ATY42_20170 PF08275 DNA primase catalytic core, N-terminal domain ATY42_20170 PF08278 DNA primase DnaG DnaB-binding ATY42_20170 PF10410 DnaB-helicase binding domain of primase ATY42_20170 PF13155 Toprim-like ATY42_20175 PF13546 ATY42_20175 ATY42_20190 PF13593 SBF-like CPA transporter family (DUF4137) ATY42_20195 PF13899 Thioredoxin-like ATY42_20200 PF01040 UbiA prenyltransferase family ATY42_20205 PF02628 ATY42_20205 ATY42_20215 PF02104 ATY42_20215 ATY42_20220 PF11137 ATY42_20220 ATY42_20225 PF00510 Cytochrome c oxidase subunit III ATY42_20230 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 ATY42_20235 PF00115 Cytochrome C and Quinol oxidase polypeptide I ATY42_20240 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ATY42_20240 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ATY42_20245 PF10003 ATY42_20245 ATY42_20250 PF00171 Aldehyde dehydrogenase family ATY42_20250 PF01619 Proline dehydrogenase ATY42_20250 PF14850 DNA-binding domain of Proline dehydrogenase ATY42_20255 PF01527 Transposase ATY42_20265 PF12760 Transposase zinc-ribbon domain ATY42_20265 PF12762 ATY42_20265 ATY42_20270 PF00210 Ferritin-like domain ATY42_20275 PF04324 BFD-like [2Fe-2S] binding domain ATY42_20280 PF00293 NUDIX domain ATY42_20295 PF00380 Ribosomal protein S9/S16 ATY42_20300 PF00572 Ribosomal protein L13 ATY42_20305 PF03232 ATY42_20305 ATY42_20310 PF00893 Small Multidrug Resistance protein ATY42_20315 PF02675 S-adenosylmethionine decarboxylase ATY42_20320 PF00027 Cyclic nucleotide-binding domain ATY42_20320 PF00325 Bacterial regulatory proteins, crp family ATY42_20325 PF12710 haloacid dehalogenase-like hydrolase ATY42_20330 PF00218 Indole-3-glycerol phosphate synthase ATY42_20335 PF00591 Glycosyl transferase family, a/b domain ATY42_20335 PF02885 Glycosyl transferase family, helical bundle domain ATY42_20340 PF01613 Flavin reductase like domain ATY42_20350 PF00117 Glutamine amidotransferase class-I ATY42_20360 PF01527 Transposase ATY42_20365 PF13276 ATY42_20365 ATY42_20365 PF13683 ATY42_20365 ATY42_20370 PF03466 LysR substrate binding domain ATY42_20375 PF03971 Monomeric isocitrate dehydrogenase ATY42_20385 PF01609 Transposase DDE domain ATY42_20385 PF05598 ATY42_20385 ATY42_20395 PF01609 Transposase DDE domain ATY42_20400 PF01609 Transposase DDE domain ATY42_20405 PF01609 Transposase DDE domain ATY42_20420 PF01609 Transposase DDE domain ATY42_20420 PF05598 ATY42_20420 ATY42_20425 PF13546 ATY42_20425 ATY42_20430 PF13546 ATY42_20430 ATY42_20435 PF00665 Integrase core domain ATY42_20435 PF13936 Helix-turn-helix domain ATY42_20440 PF00872 ATY42_20440 ATY42_20445 PF14489 QueF-like protein ATY42_20445 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ATY42_20455 PF01546 Peptidase family M20/M25/M40 ATY42_20455 PF07687 Peptidase dimerisation domain ATY42_20460 PF16576 ATY42_20460 ATY42_20465 PF00873 AcrB/AcrD/AcrF family ATY42_20470 PF00873 AcrB/AcrD/AcrF family ATY42_20475 PF07063 Domain of unknown function (DUF1338) ATY42_20480 PF01609 Transposase DDE domain ATY42_20485 PF12760 Transposase zinc-ribbon domain ATY42_20485 PF12762 ATY42_20485 ATY42_20490 PF12760 Transposase zinc-ribbon domain ATY42_20490 PF12762 ATY42_20490 ATY42_20495 PF09500 Putative thioesterase (yiiD_Cterm) ATY42_20505 PF00581 Rhodanese-like domain ATY42_20510 PF02556 Preprotein translocase subunit SecB ATY42_20515 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ATY42_20515 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ATY42_20525 PF00205 Thiamine pyrophosphate enzyme, central domain ATY42_20525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ATY42_20525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ATY42_20530 PF00512 His Kinase A (phospho-acceptor) domain ATY42_20530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_20535 PF00072 Response regulator receiver domain ATY42_20535 PF00158 Sigma-54 interaction domain ATY42_20535 PF02954 Bacterial regulatory protein, Fis family ATY42_20550 PF07690 Major Facilitator Superfamily ATY42_20555 PF00588 SpoU rRNA Methylase family ATY42_20565 PF13698 ATY42_20565 ATY42_20570 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ATY42_20570 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ATY42_20575 PF02661 Fic/DOC family ATY42_20575 PF13784 Fic/DOC family N-terminal ATY42_20580 PF01555 DNA methylase ATY42_20585 PF04851 Type III restriction enzyme, res subunit ATY42_20590 PF00561 alpha/beta hydrolase fold ATY42_20595 PF03692 ATY42_20595 ATY42_20600 PF00501 AMP-binding enzyme ATY42_20605 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family ATY42_20610 PF01609 Transposase DDE domain ATY42_20610 PF05598 ATY42_20610 ATY42_20615 PF12802 MarR family ATY42_20620 PF11871 ATY42_20620 ATY42_20620 PF13487 HD domain ATY42_20625 PF07690 Major Facilitator Superfamily ATY42_20630 PF00132 Bacterial transferase hexapeptide (six repeats) ATY42_20640 PF00920 Dehydratase family ATY42_20645 PF00589 Phage integrase family ATY42_20645 PF13495 Phage integrase, N-terminal SAM-like domain ATY42_20650 PF05598 ATY42_20650 ATY42_20655 PF01609 Transposase DDE domain ATY42_20660 PF13936 Helix-turn-helix domain ATY42_20670 PF01609 Transposase DDE domain ATY42_20670 PF05598 ATY42_20670 ATY42_20685 PF01218 Coproporphyrinogen III oxidase ATY42_20690 PF00476 DNA polymerase family A ATY42_20690 PF01367 5'-3' exonuclease, C-terminal SAM fold ATY42_20690 PF01612 3'-5' exonuclease ATY42_20690 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ATY42_20695 PF11191 Protein of unknown function (DUF2782) ATY42_20700 PF13276 ATY42_20700 ATY42_20700 PF13683 ATY42_20700 ATY42_20705 PF01527 Transposase ATY42_20715 PF00456 Transketolase, thiamine diphosphate binding domain ATY42_20720 PF07745 Glycosyl hydrolase family 53 ATY42_20725 PF07745 Glycosyl hydrolase family 53 ATY42_20735 PF01764 Lipase (class 3) ATY42_20740 PF03377 Xanthomonas avirulence protein, Avr/PthA ATY42_20750 PF05598 ATY42_20750 ATY42_20755 PF01609 Transposase DDE domain ATY42_20775 PF00672 HAMP domain ATY42_20775 PF02743 Cache domain ATY42_20775 PF07228 Stage II sporulation protein E (SpoIIE) ATY42_20780 PF13581 Histidine kinase-like ATPase domain ATY42_20785 PF13466 STAS domain ATY42_20790 PF04264 YceI-like domain ATY42_20795 PF00881 Nitroreductase family ATY42_20800 PF06258 ATY42_20800 ATY42_20820 PF09286 Pro-kumamolisin, activation domain ATY42_20825 PF02592 ATY42_20825 ATY42_20830 PF03710 Glutamate-ammonia ligase adenylyltransferase ATY42_20830 PF08335 GlnD PII-uridylyltransferase ATY42_20840 PF08450 SMP-30/Gluconolaconase/LRE-like region ATY42_20865 PF12760 Transposase zinc-ribbon domain ATY42_20865 PF12762 ATY42_20865 ATY42_20885 PF00793 DAHP synthetase I family ATY42_20890 PF00593 TonB dependent receptor ATY42_20895 PF07715 TonB-dependent Receptor Plug Domain ATY42_20905 PF00118 TCP-1/cpn60 chaperonin family ATY42_20910 PF00166 Chaperonin 10 Kd subunit ATY42_20925 PF01936 NYN domain ATY42_20925 PF12872 OST-HTH/LOTUS domain ATY42_20935 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATY42_20945 PF00140 Sigma-70 factor, region 1 ATY42_20945 PF04542 Sigma-70 region 2 ATY42_20945 PF04545 Sigma-70, region 4 ATY42_20950 PF03167 Uracil DNA glycosylase superfamily ATY42_20955 PF00072 Response regulator receiver domain ATY42_20965 PF00005 ABC transporter ATY42_20970 PF00270 DEAD/DEAH box helicase ATY42_20970 PF00271 Helicase conserved C-terminal domain ATY42_20970 PF12300 ATY42_20970 ATY42_20975 PF00085 Thioredoxin ATY42_20980 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATY42_20980 PF07497 Rho termination factor, RNA-binding domain ATY42_20980 PF07498 Rho termination factor, N-terminal domain ATY42_21000 PF01103 Surface antigen ATY42_21000 PF07244 Surface antigen variable number repeat ATY42_21000 PF17243 ATY42_21000 ATY42_21005 PF04357 ATY42_21005 ATY42_21010 PF13551 Winged helix-turn helix ATY42_21010 PF13592 ATY42_21010 ATY42_21020 PF03176 MMPL family ATY42_21030 PF03279 ATY42_21030 ATY42_21035 PF07977 FabA-like domain ATY42_21040 PF01553 Acyltransferase ATY42_21050 PF00550 Phosphopantetheine attachment site ATY42_21055 PF01494 FAD binding domain ATY42_21065 PF06189 ATY42_21065 ATY42_21070 PF00501 AMP-binding enzyme ATY42_21075 PF00326 Prolyl oligopeptidase family ATY42_21075 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ATY42_21100 PF04191 Phospholipid methyltransferase ATY42_21105 PF01638 HxlR-like helix-turn-helix ATY42_21110 PF05368 NmrA-like family ATY42_21120 PF03812 ATY42_21120 ATY42_21125 PF01717 Cobalamin-independent synthase, Catalytic domain ATY42_21130 PF08908 ATY42_21130 ATY42_21135 PF03358 NADPH-dependent FMN reductase ATY42_21140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY42_21140 PF03466 LysR substrate binding domain ATY42_21145 PF02677 ATY42_21145 ATY42_21150 PF02219 Methylenetetrahydrofolate reductase ATY42_21155 PF00512 His Kinase A (phospho-acceptor) domain ATY42_21160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_21165 PF00072 Response regulator receiver domain ATY42_21165 PF00486 Transcriptional regulatory protein, C terminal ATY42_21170 PF00551 Formyl transferase ATY42_21170 PF01842 ACT domain ATY42_21180 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ATY42_21180 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ATY42_21185 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ATY42_21190 PF02146 Sir2 family ATY42_21195 PF00376 MerR family regulatory protein ATY42_21200 PF07690 Major Facilitator Superfamily ATY42_21205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY42_21205 PF03466 LysR substrate binding domain ATY42_21215 PF01026 TatD related DNase ATY42_21225 PF00326 Prolyl oligopeptidase family ATY42_21235 PF12760 Transposase zinc-ribbon domain ATY42_21235 PF12762 ATY42_21235 ATY42_21245 PF13340 ATY42_21245 ATY42_21250 PF13586 ATY42_21250 ATY42_21255 PF13358 DDE superfamily endonuclease ATY42_21255 PF13551 Winged helix-turn helix ATY42_21255 PF13592 ATY42_21255 ATY42_21265 PF00266 Aminotransferase class-V ATY42_21270 PF01522 Polysaccharide deacetylase ATY42_21275 PF11533 Protein of unknown function (DUF3225) ATY42_21280 PF09349 OHCU decarboxylase ATY42_21290 PF13546 ATY42_21290 ATY42_21295 PF01609 Transposase DDE domain ATY42_21320 PF00665 Integrase core domain ATY42_21325 PF00326 Prolyl oligopeptidase family ATY42_21330 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain ATY42_21330 PF00364 Biotin-requiring enzyme ATY42_21330 PF02785 Biotin carboxylase C-terminal domain ATY42_21330 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ATY42_21335 PF01039 Carboxyl transferase domain ATY42_21340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATY42_21340 PF02770 Acyl-CoA dehydrogenase, middle domain ATY42_21340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATY42_21345 PF00440 Bacterial regulatory proteins, tetR family ATY42_21355 PF11804 ATY42_21355 ATY42_21365 PF03929 ATY42_21365 ATY42_21370 PF03929 ATY42_21370 ATY42_21375 PF12365 ATY42_21375 ATY42_21385 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ATY42_21395 PF03203 ATY42_21395 ATY42_21400 PF02492 CobW/HypB/UreG, nucleotide-binding domain ATY42_21400 PF07683 Cobalamin synthesis protein cobW C-terminal domain ATY42_21415 PF12146 Putative lysophospholipase ATY42_21420 PF03969 AFG1-like ATPase ATY42_21425 PF00005 ABC transporter ATY42_21435 PF00593 TonB dependent receptor ATY42_21435 PF07715 TonB-dependent Receptor Plug Domain ATY42_21440 PF13469 Sulfotransferase family ATY42_21445 PF02092 ATY42_21445 ATY42_21445 PF05746 DALR anticodon binding domain ATY42_21450 PF02091 Glycyl-tRNA synthetase alpha subunit ATY42_21455 PF00437 Type II/IV secretion system protein ATY42_21455 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ATY42_21465 PF01609 Transposase DDE domain ATY42_21470 PF00117 Glutamine amidotransferase class-I ATY42_21480 PF00902 Sec-independent protein translocase protein (TatC) ATY42_21485 PF02416 mttA/Hcf106 family ATY42_21490 PF02416 mttA/Hcf106 family ATY42_21495 PF04366 ATY42_21495 ATY42_21500 PF00762 Ferrochelatase ATY42_21505 PF00561 alpha/beta hydrolase fold ATY42_21515 PF01863 Protein of unknown function DUF45 ATY42_21520 PF04381 Putative exonuclease, RdgC ATY42_21525 PF01171 PP-loop family ATY42_21535 PF00356 Bacterial regulatory proteins, lacI family ATY42_21535 PF13377 Periplasmic binding protein-like domain ATY42_21540 PF03648 Glycosyl hydrolase family 67 N-terminus ATY42_21540 PF07477 Glycosyl hydrolase family 67 C-terminus ATY42_21540 PF07488 Glycosyl hydrolase family 67 middle domain ATY42_21545 PF02837 Glycosyl hydrolases family 2, sugar binding domain ATY42_21545 PF03629 Domain of unknown function (DUF303) ATY42_21550 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ATY42_21550 PF13378 Enolase C-terminal domain-like ATY42_21555 PF04616 Glycosyl hydrolases family 43 ATY42_21560 PF00933 Glycosyl hydrolase family 3 N terminal domain ATY42_21560 PF01915 Glycosyl hydrolase family 3 C-terminal domain ATY42_21560 PF07691 PA14 domain ATY42_21560 PF14310 Fibronectin type III-like domain ATY42_21565 PF01232 Mannitol dehydrogenase Rossmann domain ATY42_21565 PF08125 Mannitol dehydrogenase C-terminal domain ATY42_21585 PF02614 Glucuronate isomerase ATY42_21590 PF00331 Glycosyl hydrolase family 10 ATY42_21595 PF00331 Glycosyl hydrolase family 10 ATY42_21605 PF07690 Major Facilitator Superfamily ATY42_21610 PF00593 TonB dependent receptor ATY42_21610 PF07715 TonB-dependent Receptor Plug Domain ATY42_21615 PF13347 MFS/sugar transport protein ATY42_21620 PF04616 Glycosyl hydrolases family 43 ATY42_21625 PF01609 Transposase DDE domain ATY42_21635 PF12760 Transposase zinc-ribbon domain ATY42_21635 PF12762 ATY42_21635 ATY42_21640 PF12792 ATY42_21640 ATY42_21645 PF13340 ATY42_21645 ATY42_21650 PF13586 ATY42_21650 ATY42_21660 PF00487 ATY42_21660 ATY42_21665 PF00111 2Fe-2S iron-sulfur cluster binding domain ATY42_21665 PF00175 Oxidoreductase NAD-binding domain ATY42_21665 PF00970 Oxidoreductase FAD-binding domain ATY42_21670 PF00440 Bacterial regulatory proteins, tetR family ATY42_21675 PF01609 Transposase DDE domain ATY42_21680 PF13546 ATY42_21680 ATY42_21685 PF00665 Integrase core domain ATY42_21685 PF13936 Helix-turn-helix domain ATY42_21690 PF11379 ATY42_21690 ATY42_21695 PF11379 ATY42_21695 ATY42_21700 PF01047 MarR family ATY42_21705 PF02566 OsmC-like protein ATY42_21710 PF11101 ATY42_21710 ATY42_21725 PF01609 Transposase DDE domain ATY42_21735 PF13560 Helix-turn-helix domain ATY42_21740 PF15579 ATY42_21740 ATY42_21745 PF15648 ATY42_21745 ATY42_21760 PF05488 PAAR motif ATY42_21780 PF01156 Inosine-uridine preferring nucleoside hydrolase ATY42_21785 PF01381 Helix-turn-helix ATY42_21790 PF05015 Plasmid maintenance system killer protein ATY42_21795 PF13245 Part of AAA domain ATY42_21795 PF13538 UvrD-like helicase C-terminal domain ATY42_21800 PF00580 UvrD/REP helicase N-terminal domain ATY42_21800 PF12705 PD-(D/E)XK nuclease superfamily ATY42_21800 PF13361 UvrD-like helicase C-terminal domain ATY42_21805 PF04257 Exodeoxyribonuclease V, gamma subunit ATY42_21820 PF07484 Phage Tail Collar Domain ATY42_21825 PF07484 Phage Tail Collar Domain ATY42_21830 PF07484 Phage Tail Collar Domain ATY42_21840 PF13358 DDE superfamily endonuclease ATY42_21845 PF00080 Copper/zinc superoxide dismutase (SODC) ATY42_21850 PF00080 Copper/zinc superoxide dismutase (SODC) ATY42_21855 PF00072 Response regulator receiver domain ATY42_21855 PF00158 Sigma-54 interaction domain ATY42_21855 PF02954 Bacterial regulatory protein, Fis family ATY42_21860 PF00512 His Kinase A (phospho-acceptor) domain ATY42_21860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATY42_21865 PF00909 Ammonium Transporter Family ATY42_21870 PF00543 Nitrogen regulatory protein P-II ATY42_21875 PF00120 Glutamine synthetase, catalytic domain ATY42_21875 PF03951 Glutamine synthetase, beta-Grasp domain ATY42_21880 PF02673 ATY42_21880 ATY42_21885 PF03724 META domain ATY42_21885 PF14302 ATY42_21885 ATY42_21895 PF01161 Phosphatidylethanolamine-binding protein ATY42_21900 PF13432 Tetratricopeptide repeat ATY42_21910 PF12697 Alpha/beta hydrolase family ATY42_21915 PF01553 Acyltransferase ATY42_21920 PF03061 Thioesterase superfamily ATY42_21925 PF13091 PLD-like domain ATY42_21930 PF04264 YceI-like domain ATY42_21935 PF00300 Histidine phosphatase superfamily (branch 1) ATY42_21940 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ATY42_21945 PF03547 ATY42_21945 ATY42_21955 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ATY42_21960 PF13560 Helix-turn-helix domain ATY42_21965 PF07804 HipA-like C-terminal domain ATY42_21965 PF13657 HipA N-terminal domain ATY42_21970 PF10017 ATY42_21970 ATY42_21975 PF03781 Sulfatase-modifying factor enzyme 1 ATY42_21975 PF12867 DinB superfamily ATY42_21980 PF00266 Aminotransferase class-V ATY42_21985 PF00528 Binding-protein-dependent transport system inner membrane component ATY42_21985 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ATY42_21990 PF00005 ABC transporter ATY42_21995 PF13202 EF hand ATY42_22000 PF00487 ATY42_22000 ATY42_22005 PF00005 ABC transporter ATY42_22015 PF01734 Patatin-like phospholipase ATY42_22020 PF12760 Transposase zinc-ribbon domain ATY42_22020 PF12762 ATY42_22020 ATY42_22030 PF01609 Transposase DDE domain ATY42_22030 PF05598 ATY42_22030 ATY42_22035 PF13276 ATY42_22035 ATY42_22035 PF13683 ATY42_22035 ATY42_22040 PF01527 Transposase ATY42_22045 PF01609 Transposase DDE domain ATY42_22055 PF00248 Aldo/keto reductase family ATY42_22060 PF00107 Zinc-binding dehydrogenase ATY42_22060 PF16884 ATY42_22060 ATY42_22065 PF00248 Aldo/keto reductase family ATY42_22075 PF00849 RNA pseudouridylate synthase ATY42_22090 PF00271 Helicase conserved C-terminal domain ATY42_22090 PF04408 Helicase associated domain (HA2) ATY42_22090 PF08482 ATY42_22090 ATY42_22095 PF07308 ATY42_22095 ATY42_22100 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ATY42_22100 PF13378 Enolase C-terminal domain-like ATY42_22105 PF01557 Fumarylacetoacetate (FAA) hydrolase family ATY42_22110 PF13561 Enoyl-(Acyl carrier protein) reductase ATY42_22115 PF04909 Amidohydrolase ATY42_22120 PF00248 Aldo/keto reductase family ATY42_22130 PF04616 Glycosyl hydrolases family 43 ATY42_22150 PF00072 Response regulator receiver domain ATY42_22150 PF00196 Bacterial regulatory proteins, luxR family ATY42_22155 PF00501 AMP-binding enzyme ATY42_22155 PF13193 AMP-binding enzyme C-terminal domain ATY42_22155 PF16177 ATY42_22155 ATY42_22170 PF04341 ATY42_22170 ATY42_22175 PF00474 Sodium:solute symporter family ATY42_22180 PF00480 ROK family ATY42_22185 PF03372 Endonuclease/Exonuclease/phosphatase family ATY42_22190 PF04828 Glutathione-dependent formaldehyde-activating enzyme ATY42_22195 PF04226 ATY42_22195 ATY42_22200 PF01648 4'-phosphopantetheinyl transferase superfamily ATY42_22205 PF09423 PhoD-like phosphatase ATY42_22205 PF16655 ATY42_22205 ATY42_22210 PF09423 PhoD-like phosphatase ATY42_22210 PF16655 ATY42_22210 ATY42_22215 PF02527 rRNA small subunit methyltransferase G ATY42_22230 PF00830 Ribosomal L28 family ATY42_22235 PF00471 Ribosomal protein L33 ATY42_22245 PF01610 ATY42_22245 ATY42_22245 PF13542 ATY42_22245 ATY42_22255 PF04303 PrpF protein ATY42_22260 PF03737 Demethylmenaquinone methyltransferase ATY42_22265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATY42_22265 PF03466 LysR substrate binding domain ATY42_22270 PF13091 PLD-like domain ATY42_22270 PF13396 ATY42_22270 ATY42_22280 PF13454 FAD-NAD(P)-binding ATY42_22285 PF00580 UvrD/REP helicase N-terminal domain ATY42_22285 PF13361 UvrD-like helicase C-terminal domain ATY42_22295 PF12760 Transposase zinc-ribbon domain ATY42_22295 PF12762 ATY42_22295 ATY42_22300 PF13520 Amino acid permease ATY42_22305 PF02646 ATY42_22305 ATY42_22315 PF00255 Glutathione peroxidase ATY42_22320 PF01609 Transposase DDE domain ATY42_22325 PF05598 ATY42_22325 ATY42_22335 PF13546 ATY42_22335 ATY42_22340 PF04055 Radical SAM superfamily ATY42_22350 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ATY42_22355 PF01694 Rhomboid family ATY42_22360 PF08850 ATY42_22360 ATY42_22365 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ATY42_22365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATY42_22370 PF03572 Peptidase family S41 ATY42_22370 PF13180 PDZ domain ATY42_22375 PF01551 Peptidase family M23 ATY42_22385 PF02225 PA domain ATY42_22385 PF04389 Peptidase family M28 ATY42_22390 PF13670 ATY42_22390 ATY42_22395 PF13546 ATY42_22395 ATY42_22400 PF05598 ATY42_22400 ATY42_22410 PF09983 ATY42_22410 ATY42_22410 PF11795 ATY42_22410 ATY42_22415 PF13555 P-loop containing region of AAA domain ATY42_22415 PF13558 Putative exonuclease SbcCD, C subunit ATY42_22420 PF13835 ATY42_22420 ATY42_22425 PF11855 ATY42_22425 ATY42_22430 PF14103 ATY42_22430 ATY42_22435 PF13304 AAA domain ATY42_22440 PF01227 GTP cyclohydrolase I ATY42_22445 PF12802 MarR family ATY42_22450 PF07869 ATY42_22450 ATY42_22455 PF02321 Outer membrane efflux protein ATY42_22460 PF04632 ATY42_22460 ATY42_22465 PF00083 Sugar (and other) transporter ATY42_22485 PF05016 Plasmid stabilisation system protein ATY42_22495 PF15579 ATY42_22495 ATY42_22500 PF15648 ATY42_22500 ATY42_22510 PF13503 ATY42_22510 ATY42_22515 PF05488 PAAR motif ATY42_22520 PF01609 Transposase DDE domain ATY42_22540 PF02595 Glycerate kinase family ATY42_22545 PF07690 Major Facilitator Superfamily ATY42_22560 PF10672 S-adenosylmethionine-dependent methyltransferase ATY42_22565 PF03741 ATY42_22565 ATY42_22570 PF01694 Rhomboid family ATY42_22575 PF03009 Glycerophosphoryl diester phosphodiesterase family ATY42_22585 PF01569 PAP2 superfamily ATY42_22590 PF01926 50S ribosome-binding GTPase ATY42_22590 PF10396 GTP-binding protein TrmE N-terminus ATY42_22590 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE ATY42_22595 PF00656 Caspase domain ATY42_22595 PF01522 Polysaccharide deacetylase ATY42_22595 PF13432 Tetratricopeptide repeat ATY42_22600 PF02096 60Kd inner membrane protein ATY42_22600 PF14849 YidC periplasmic domain ATY42_22605 PF00825 Ribonuclease P ATY42_22610 PF00468 Ribosomal protein L34