ATY42_00005 SM00382 ATPases associated with a variety of cellular activities ATY42_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain ATY42_00010 SM00480 DNA polymerase III beta subunit ATY42_00020 SM00387 Histidine kinase-like ATPases ATY42_00020 SM00433 TopoisomeraseII ATY42_00035 SM00028 Tetratricopeptide repeats ATY42_00070 SM00155 Phospholipase D. Active site motifs. ATY42_00160 SM00382 ATPases associated with a variety of cellular activities ATY42_00185 SM01126 ATY42_00185 ATY42_00210 SM00487 DEAD-like helicases superfamily ATY42_00210 SM00490 helicase superfamily c-terminal domain ATY42_00280 SM01126 ATY42_00280 ATY42_00305 SM00642 Alpha-amylase domain ATY42_00315 SM00642 Alpha-amylase domain ATY42_00325 SM00642 Alpha-amylase domain ATY42_00330 SM00642 Alpha-amylase domain ATY42_00340 SM00267 diguanylate cyclase ATY42_00425 SM00382 ATPases associated with a variety of cellular activities ATY42_00530 SM00369 Leucine-rich repeats, typical (most populated) subfamily ATY42_00550 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY42_00650 SM00382 ATPases associated with a variety of cellular activities ATY42_00670 SM01126 ATY42_00670 ATY42_00695 SM00487 DEAD-like helicases superfamily ATY42_00695 SM00490 helicase superfamily c-terminal domain ATY42_00770 SM01126 ATY42_00770 ATY42_00805 SM00354 helix_turn _helix lactose operon repressor ATY42_00825 SM00642 Alpha-amylase domain ATY42_00830 SM00642 Alpha-amylase domain ATY42_00835 SM00642 Alpha-amylase domain ATY42_00885 SM00382 ATPases associated with a variety of cellular activities ATY42_00895 SM00938 Nitrogen regulatory protein P-II ATY42_00960 SM01228 ATY42_00960 ATY42_01025 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY42_01025 SM00388 His Kinase A (phosphoacceptor) domain ATY42_01055 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family ATY42_01075 SM00354 helix_turn _helix lactose operon repressor ATY42_01085 SM00563 Phosphate acyltransferases ATY42_01135 SM00344 helix_turn_helix ASNC type ATY42_01190 SM00829 Enoylreductase ATY42_01250 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY42_01250 SM00091 PAS domain ATY42_01305 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain ATY42_01305 SM01232 ATY42_01305 ATY42_01310 SM01126 ATY42_01310 ATY42_01360 SM00382 ATPases associated with a variety of cellular activities ATY42_01375 SM01126 ATY42_01375 ATY42_01445 SM00564 beta-propeller repeat ATY42_01485 SM00091 PAS domain ATY42_01485 SM00387 Histidine kinase-like ATPases ATY42_01485 SM00388 His Kinase A (phosphoacceptor) domain ATY42_01485 SM00448 cheY-homologous receiver domain ATY42_01495 SM00346 helix_turn_helix isocitrate lyase regulation ATY42_01515 SM01126 ATY42_01515 ATY42_01540 SM00563 Phosphate acyltransferases ATY42_01635 SM01126 ATY42_01635 ATY42_01675 SM00382 ATPases associated with a variety of cellular activities ATY42_01700 SM00530 Helix-turn-helix XRE-family like proteins ATY42_01710 SM00382 ATPases associated with a variety of cellular activities ATY42_01730 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. ATY42_01770 SM01004 Delta-aminolevulinic acid dehydratase ATY42_01785 SM00477 DNA/RNA non-specific endonuclease ATY42_01785 SM00892 DNA/RNA non-specific endonuclease ATY42_01810 SM00491 ATY42_01810 ATY42_01820 SM01126 ATY42_01820 ATY42_01835 SM01060 ATY42_01835 ATY42_01840 SM00248 ankyrin repeats ATY42_01865 SM00448 cheY-homologous receiver domain ATY42_01865 SM00862 Transcriptional regulatory protein, C terminal ATY42_01870 SM00387 Histidine kinase-like ATPases ATY42_01870 SM00388 His Kinase A (phosphoacceptor) domain ATY42_01960 SM00849 Metallo-beta-lactamase superfamily ATY42_02005 SM01060 ATY42_02005 ATY42_02050 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY42_02050 SM00876 Biotin and Thiamin Synthesis associated domain ATY42_02065 SM00822 ATY42_02065 ATY42_02090 SM00825 Beta-ketoacyl synthase ATY42_02100 SM00248 ankyrin repeats ATY42_02105 SM00226 Low molecular weight phosphatase family ATY42_02130 SM00116 Domain in cystathionine beta-synthase and other proteins. ATY42_02130 SM00924 MgtE intracellular N domain ATY42_02140 SM00881 CoA binding domain ATY42_02205 SM00998 Adenylosuccinate lyase C-terminus ATY42_02225 SM00346 helix_turn_helix isocitrate lyase regulation ATY42_02230 SM00090 RIO-like kinase ATY42_02255 SM00836 DALR anticodon binding domain ATY42_02255 SM01016 Arginyl tRNA synthetase N terminal dom ATY42_02285 SM01259 ATY42_02285 ATY42_02305 SM00470 ParB-like nuclease domain ATY42_02390 SM00073 Histidine Phosphotransfer domain ATY42_02390 SM00387 Histidine kinase-like ATPases ATY42_02390 SM00388 His Kinase A (phosphoacceptor) domain ATY42_02390 SM00448 cheY-homologous receiver domain ATY42_02395 SM00052 Putative diguanylate phosphodiesterase ATY42_02395 SM00267 diguanylate cyclase ATY42_02395 SM00448 cheY-homologous receiver domain ATY42_02465 SM00563 Phosphate acyltransferases ATY42_02495 SM01209 ATY42_02495 ATY42_02495 SM01210 ATY42_02495 ATY42_02505 SM00798 AICARFT/IMPCHase bienzyme ATY42_02505 SM00851 MGS-like domain ATY42_02535 SM01126 ATY42_02535 ATY42_02550 SM00530 Helix-turn-helix XRE-family like proteins ATY42_02575 SM00878 Biotin carboxylase C-terminal domain ATY42_02610 SM01126 ATY42_02610 ATY42_02625 SM00487 DEAD-like helicases superfamily ATY42_02625 SM00490 helicase superfamily c-terminal domain ATY42_02685 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain ATY42_02685 SM00437 Bacterial DNA topoisomerase I DNA-binding domain ATY42_02685 SM00493 ATY42_02685 ATY42_02710 SM00257 Lysin motif ATY42_02910 SM01126 ATY42_02910 ATY42_02925 SM00382 ATPases associated with a variety of cellular activities ATY42_03000 SM00382 ATPases associated with a variety of cellular activities ATY42_03000 SM00448 cheY-homologous receiver domain ATY42_03010 SM00448 cheY-homologous receiver domain ATY42_03015 SM00138 Methyltransferase, chemotaxis proteins ATY42_03035 SM00387 Histidine kinase-like ATPases ATY42_03040 SM00448 cheY-homologous receiver domain ATY42_03045 SM00850 LytTr DNA-binding domain ATY42_03110 SM00986 Uracil DNA glycosylase superfamily ATY42_03110 SM00987 UreE urease accessory protein, C-terminal domain ATY42_03115 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. ATY42_03135 SM00382 ATPases associated with a variety of cellular activities ATY42_03170 SM00387 Histidine kinase-like ATPases ATY42_03170 SM00388 His Kinase A (phosphoacceptor) domain ATY42_03175 SM00448 cheY-homologous receiver domain ATY42_03175 SM00862 Transcriptional regulatory protein, C terminal ATY42_03215 SM00344 helix_turn_helix ASNC type ATY42_03225 SM01005 Alanine racemase, C-terminal domain ATY42_03245 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY42_03245 SM00091 PAS domain ATY42_03245 SM00387 Histidine kinase-like ATPases ATY42_03245 SM00388 His Kinase A (phosphoacceptor) domain ATY42_03245 SM00448 cheY-homologous receiver domain ATY42_03320 SM00382 ATPases associated with a variety of cellular activities ATY42_03320 SM00930 ATY42_03320 ATY42_03345 SM00986 Uracil DNA glycosylase superfamily ATY42_03345 SM00987 UreE urease accessory protein, C-terminal domain ATY42_03415 SM00382 ATPases associated with a variety of cellular activities ATY42_03425 SM00830 Chorismate mutase type II ATY42_03450 SM01126 ATY42_03450 ATY42_03545 SM00825 Beta-ketoacyl synthase ATY42_03570 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY42_03595 SM00487 DEAD-like helicases superfamily ATY42_03595 SM00490 helicase superfamily c-terminal domain ATY42_03630 SM00116 Domain in cystathionine beta-synthase and other proteins. ATY42_03680 SM00382 ATPases associated with a variety of cellular activities ATY42_03690 SM00893 Electron transfer flavoprotein domain ATY42_03695 SM00893 Electron transfer flavoprotein domain ATY42_03730 SM00882 Coenzyme A transferase ATY42_03735 SM00882 Coenzyme A transferase ATY42_03765 SM00382 ATPases associated with a variety of cellular activities ATY42_03780 SM00528 Domain in histone-like proteins of HNS family ATY42_03835 SM00656 ATY42_03835 ATY42_03920 SM01211 ATY42_03920 ATY42_03945 SM00382 ATPases associated with a variety of cellular activities ATY42_04010 SM00345 helix_turn_helix gluconate operon transcriptional repressor ATY42_04010 SM00866 ATY42_04010 ATY42_04075 SM00487 DEAD-like helicases superfamily ATY42_04080 SM01126 ATY42_04080 ATY42_04110 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ATY42_04115 SM00822 ATY42_04115 ATY42_04125 SM00825 Beta-ketoacyl synthase ATY42_04160 SM00382 ATPases associated with a variety of cellular activities ATY42_04245 SM00271 DnaJ molecular chaperone homology domain ATY42_04250 SM00448 cheY-homologous receiver domain ATY42_04255 SM00244 prohibitin homologues ATY42_04260 SM00244 prohibitin homologues ATY42_04270 SM00788 Adenylosuccinate synthetase ATY42_04380 SM01329 ATY42_04380 ATY42_04385 SM00917 LeuA allosteric (dimerisation) domain ATY42_04415 SM00862 Transcriptional regulatory protein, C terminal ATY42_04420 SM00342 helix_turn_helix, arabinose operon control protein ATY42_04450 SM01126 ATY42_04450 ATY42_04460 SM01126 ATY42_04460 ATY42_04485 SM00464 Found in ATP-dependent protease La (LON) ATY42_04520 SM00838 Elongation factor G C-terminus ATY42_04600 SM01126 ATY42_04600 ATY42_04655 SM01126 ATY42_04655 ATY42_04740 SM01126 ATY42_04740 ATY42_04745 SM01329 ATY42_04745 ATY42_04810 SM00382 ATPases associated with a variety of cellular activities ATY42_04810 SM00994 ClpX C4-type zinc finger ATY42_04810 SM01086 C-terminal, D2-small domain, of ClpB protein ATY42_04815 SM00382 ATPases associated with a variety of cellular activities ATY42_04815 SM00464 Found in ATP-dependent protease La (LON) ATY42_04820 SM00411 bacterial (prokaryotic) histone like domain ATY42_04845 SM00257 Lysin motif ATY42_04850 SM00849 Metallo-beta-lactamase superfamily ATY42_04865 SM00479 ATY42_04865 ATY42_04870 SM00331 Sigma factor PP2C-like phosphatases ATY42_04870 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ATY42_04930 SM01126 ATY42_04930 ATY42_04955 SM00849 Metallo-beta-lactamase superfamily ATY42_04960 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY42_04990 SM00382 ATPases associated with a variety of cellular activities ATY42_05000 SM00493 ATY42_05000 ATY42_05015 SM00460 Transglutaminase/protease-like homologues ATY42_05025 SM00382 ATPases associated with a variety of cellular activities ATY42_05100 SM00450 Rhodanese Homology Domain ATY42_05130 SM01154 ATY42_05130 ATY42_05140 SM00642 Alpha-amylase domain ATY42_05155 SM00354 helix_turn _helix lactose operon repressor ATY42_05160 SM00822 ATY42_05160 ATY42_05175 SM00448 cheY-homologous receiver domain ATY42_05175 SM00862 Transcriptional regulatory protein, C terminal ATY42_05180 SM00387 Histidine kinase-like ATPases ATY42_05180 SM00388 His Kinase A (phosphoacceptor) domain ATY42_05190 SM00421 helix_turn_helix, Lux Regulon ATY42_05190 SM00448 cheY-homologous receiver domain ATY42_05230 SM00387 Histidine kinase-like ATPases ATY42_05230 SM00388 His Kinase A (phosphoacceptor) domain ATY42_05230 SM00448 cheY-homologous receiver domain ATY42_05245 SM00919 Malic enzyme, NAD binding domain ATY42_05245 SM01274 ATY42_05245 ATY42_05335 SM01011 Aminopeptidase P, N-terminal domain ATY42_05370 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY42_05395 SM00072 Guanylate kinase homologues. ATY42_05405 SM01409 ATY42_05405 ATY42_05410 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY42_05410 SM00954 Region found in RelA / SpoT proteins ATY42_05420 SM00487 DEAD-like helicases superfamily ATY42_05420 SM00490 helicase superfamily c-terminal domain ATY42_05475 SM00965 Secretin and TonB N terminus short domain ATY42_05510 SM00327 von Willebrand factor (vWF) type A domain ATY42_05515 SM00028 Tetratricopeptide repeats ATY42_05515 SM00327 von Willebrand factor (vWF) type A domain ATY42_05535 SM00861 Transketolase, pyrimidine binding domain ATY42_05595 SM00448 cheY-homologous receiver domain ATY42_05595 SM00862 Transcriptional regulatory protein, C terminal ATY42_05600 SM00387 Histidine kinase-like ATPases ATY42_05600 SM00388 His Kinase A (phosphoacceptor) domain ATY42_05620 SM00382 ATPases associated with a variety of cellular activities ATY42_05635 SM00849 Metallo-beta-lactamase superfamily ATY42_05670 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ATY42_05685 SM01126 ATY42_05685 ATY42_05690 SM00387 Histidine kinase-like ATPases ATY42_05690 SM00388 His Kinase A (phosphoacceptor) domain ATY42_05695 SM00448 cheY-homologous receiver domain ATY42_05695 SM00862 Transcriptional regulatory protein, C terminal ATY42_05975 SM00422 helix_turn_helix, mercury resistance ATY42_06000 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. ATY42_06010 SM00849 Metallo-beta-lactamase superfamily ATY42_06035 SM00421 helix_turn_helix, Lux Regulon ATY42_06070 SM00924 MgtE intracellular N domain ATY42_06115 SM00382 ATPases associated with a variety of cellular activities ATY42_06135 SM00116 Domain in cystathionine beta-synthase and other proteins. ATY42_06275 SM00813 Alpha-L-arabinofuranosidase C-terminus ATY42_06295 SM00382 ATPases associated with a variety of cellular activities ATY42_06295 SM00962 SRP54-type protein, GTPase domain ATY42_06295 SM00963 SRP54-type protein, helical bundle domain ATY42_06340 SM00363 S4 RNA-binding domain ATY42_06365 SM00382 ATPases associated with a variety of cellular activities ATY42_06365 SM01086 C-terminal, D2-small domain, of ClpB protein ATY42_06435 SM00855 Phosphoglycerate mutase family ATY42_06515 SM00382 ATPases associated with a variety of cellular activities ATY42_06560 SM00862 Transcriptional regulatory protein, C terminal ATY42_06565 SM00342 helix_turn_helix, arabinose operon control protein ATY42_06625 SM01126 ATY42_06625 ATY42_06665 SM00382 ATPases associated with a variety of cellular activities ATY42_06680 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain ATY42_06715 SM00411 bacterial (prokaryotic) histone like domain ATY42_06740 SM00382 ATPases associated with a variety of cellular activities ATY42_06780 SM00732 Likely ribonuclease with RNase H fold. ATY42_06860 SM00267 diguanylate cyclase ATY42_06865 SM00829 Enoylreductase ATY42_06880 SM01126 ATY42_06880 ATY42_06990 SM00855 Phosphoglycerate mutase family ATY42_07010 SM00448 cheY-homologous receiver domain ATY42_07015 SM00138 Methyltransferase, chemotaxis proteins ATY42_07020 SM00052 Putative diguanylate phosphodiesterase ATY42_07020 SM00448 cheY-homologous receiver domain ATY42_07025 SM00260 Two component signalling adaptor domain ATY42_07030 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY42_07030 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY42_07035 SM00073 Histidine Phosphotransfer domain ATY42_07035 SM00260 Two component signalling adaptor domain ATY42_07035 SM00387 Histidine kinase-like ATPases ATY42_07035 SM01231 ATY42_07035 ATY42_07045 SM00487 DEAD-like helicases superfamily ATY42_07045 SM00490 helicase superfamily c-terminal domain ATY42_07045 SM00982 ATY42_07045 ATY42_07045 SM01058 CarD-like/TRCF domain ATY42_07065 SM00387 Histidine kinase-like ATPases ATY42_07065 SM00388 His Kinase A (phosphoacceptor) domain ATY42_07080 SM00645 Papain family cysteine protease ATY42_07100 SM00645 Papain family cysteine protease ATY42_07120 SM00645 Papain family cysteine protease ATY42_07175 SM00357 Cold shock protein domain ATY42_07305 SM00829 Enoylreductase ATY42_07325 SM00342 helix_turn_helix, arabinose operon control protein ATY42_07325 SM00478 endonuclease III ATY42_07325 SM01009 AlkA N-terminal domain ATY42_07375 SM00487 DEAD-like helicases superfamily ATY42_07375 SM00490 helicase superfamily c-terminal domain ATY42_07380 SM00052 Putative diguanylate phosphodiesterase ATY42_07380 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY42_07380 SM00091 PAS domain ATY42_07380 SM00267 diguanylate cyclase ATY42_07385 SM00363 S4 RNA-binding domain ATY42_07415 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY42_07415 SM00387 Histidine kinase-like ATPases ATY42_07415 SM00388 His Kinase A (phosphoacceptor) domain ATY42_07420 SM00448 cheY-homologous receiver domain ATY42_07420 SM00862 Transcriptional regulatory protein, C terminal ATY42_07450 SM00382 ATPases associated with a variety of cellular activities ATY42_07565 SM00382 ATPases associated with a variety of cellular activities ATY42_07565 SM00448 cheY-homologous receiver domain ATY42_07570 SM00387 Histidine kinase-like ATPases ATY42_07570 SM00388 His Kinase A (phosphoacceptor) domain ATY42_07580 SM00881 CoA binding domain ATY42_07745 SM00904 Riboflavin kinase ATY42_07790 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY42_07850 SM00533 DNA-binding domain of DNA mismatch repair MUTS family ATY42_07850 SM00534 ATPase domain of DNA mismatch repair MUTS family ATY42_07875 SM00382 ATPases associated with a variety of cellular activities ATY42_07915 SM00834 Putative regulatory protein ATY42_07950 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ATY42_07960 SM00382 ATPases associated with a variety of cellular activities ATY42_08080 SM00341 Helicase and RNase D C-terminal ATY42_08080 SM00487 DEAD-like helicases superfamily ATY42_08080 SM00490 helicase superfamily c-terminal domain ATY42_08080 SM00956 ATY42_08080 ATY42_08090 SM00382 ATPases associated with a variety of cellular activities ATY42_08090 SM00487 DEAD-like helicases superfamily ATY42_08090 SM00490 helicase superfamily c-terminal domain ATY42_08090 SM00847 Helicase associated domain (HA2) Add an annotation ATY42_08155 SM00954 Region found in RelA / SpoT proteins ATY42_08180 SM00491 ATY42_08180 ATY42_08205 SM00448 cheY-homologous receiver domain ATY42_08210 SM00448 cheY-homologous receiver domain ATY42_08215 SM00260 Two component signalling adaptor domain ATY42_08220 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY42_08225 SM00073 Histidine Phosphotransfer domain ATY42_08225 SM00260 Two component signalling adaptor domain ATY42_08225 SM00387 Histidine kinase-like ATPases ATY42_08225 SM00448 cheY-homologous receiver domain ATY42_08225 SM01231 ATY42_08225 ATY42_08235 SM00260 Two component signalling adaptor domain ATY42_08255 SM00327 von Willebrand factor (vWF) type A domain ATY42_08280 SM00369 Leucine-rich repeats, typical (most populated) subfamily ATY42_08330 SM01149 ATY42_08330 ATY42_08380 SM00382 ATPases associated with a variety of cellular activities ATY42_08385 SM00758 ATY42_08385 ATY42_08385 SM01217 ATY42_08385 ATY42_08400 SM00636 ATY42_08400 ATY42_08405 SM00812 Alpha-L-fucosidase ATY42_08450 SM00244 prohibitin homologues ATY42_08530 SM00116 Domain in cystathionine beta-synthase and other proteins. ATY42_08580 SM00867 YceI-like domain ATY42_08590 SM00867 YceI-like domain ATY42_08595 SM00387 Histidine kinase-like ATPases ATY42_08595 SM00388 His Kinase A (phosphoacceptor) domain ATY42_08595 SM00448 cheY-homologous receiver domain ATY42_08600 SM00387 Histidine kinase-like ATPases ATY42_08600 SM00388 His Kinase A (phosphoacceptor) domain ATY42_08600 SM00448 cheY-homologous receiver domain ATY42_08605 SM00387 Histidine kinase-like ATPases ATY42_08605 SM00388 His Kinase A (phosphoacceptor) domain ATY42_08605 SM00448 cheY-homologous receiver domain ATY42_08625 SM00812 Alpha-L-fucosidase ATY42_08655 SM00530 Helix-turn-helix XRE-family like proteins ATY42_08705 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY42_08710 SM00838 Elongation factor G C-terminus ATY42_08725 SM00358 Double-stranded RNA binding motif ATY42_08725 SM00535 Ribonuclease III family ATY42_08740 SM00448 cheY-homologous receiver domain ATY42_08750 SM01118 ATY42_08750 ATY42_08795 SM00357 Cold shock protein domain ATY42_08820 SM00487 DEAD-like helicases superfamily ATY42_08820 SM00490 helicase superfamily c-terminal domain ATY42_08850 SM00267 diguanylate cyclase ATY42_08870 SM00869 Autotransporter beta-domain ATY42_08875 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ATY42_09215 SM00382 ATPases associated with a variety of cellular activities ATY42_09235 SM00481 DNA polymerase alpha chain like domain ATY42_09270 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY42_09325 SM00972 Spore Coat Protein U domain ATY42_09340 SM00972 Spore Coat Protein U domain ATY42_09350 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY42_09380 SM01172 ATY42_09380 ATY42_09385 SM00710 Parallel beta-helix repeats ATY42_09385 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses ATY42_09410 SM00434 DNA Topoisomerase IV ATY42_09420 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY42_09465 SM01126 ATY42_09465 ATY42_09490 SM00861 Transketolase, pyrimidine binding domain ATY42_09495 SM00507 HNH nucleases ATY42_09565 SM00271 DnaJ molecular chaperone homology domain ATY42_09595 SM00382 ATPases associated with a variety of cellular activities ATY42_09620 SM00861 Transketolase, pyrimidine binding domain ATY42_09630 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. ATY42_09635 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY42_09715 SM00382 ATPases associated with a variety of cellular activities ATY42_09720 SM00345 helix_turn_helix gluconate operon transcriptional repressor ATY42_09735 SM00984 UDP binding domain ATY42_09755 SM00354 helix_turn _helix lactose operon repressor ATY42_09775 SM01018 B12 binding domain ATY42_09785 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ATY42_09810 SM00316 Ribosomal protein S1-like RNA-binding domain ATY42_09810 SM00357 Cold shock protein domain ATY42_09810 SM00955 ATY42_09810 ATY42_09830 SM00967 RNA 2'-O ribose methyltransferase substrate binding ATY42_09850 SM01126 ATY42_09850 ATY42_09905 SM01126 ATY42_09905 ATY42_09925 SM01126 ATY42_09925 ATY42_10075 SM01007 Class II Aldolase and Adducin N-terminal domain ATY42_10160 SM00382 ATPases associated with a variety of cellular activities ATY42_10175 SM01126 ATY42_10175 ATY42_10190 SM00363 S4 RNA-binding domain ATY42_10215 SM00354 helix_turn _helix lactose operon repressor ATY42_10290 SM00316 Ribosomal protein S1-like RNA-binding domain ATY42_10295 SM00411 bacterial (prokaryotic) histone like domain ATY42_10315 SM00822 ATY42_10315 ATY42_10365 SM00116 Domain in cystathionine beta-synthase and other proteins. ATY42_10365 SM01240 ATY42_10365 ATY42_10420 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY42_10430 SM00529 Helix-turn-helix diphteria tox regulatory element ATY42_10440 SM00479 ATY42_10440 ATY42_10525 SM00316 Ribosomal protein S1-like RNA-binding domain ATY42_10525 SM00732 Likely ribonuclease with RNase H fold. ATY42_10535 SM00448 cheY-homologous receiver domain ATY42_10540 SM00387 Histidine kinase-like ATPases ATY42_10550 SM00014 Acid phosphatase homologues ATY42_10960 SM01126 ATY42_10960 ATY42_11005 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ATY42_11005 SM00465 GIY-YIG type nucleases (URI domain) ATY42_11015 SM00226 Low molecular weight phosphatase family ATY42_11030 SM00382 ATPases associated with a variety of cellular activities ATY42_11045 SM00849 Metallo-beta-lactamase superfamily ATY42_11050 SM01126 ATY42_11050 ATY42_11060 SM00382 ATPases associated with a variety of cellular activities ATY42_11110 SM00382 ATPases associated with a variety of cellular activities ATY42_11165 SM00448 cheY-homologous receiver domain ATY42_11170 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY42_11170 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY42_11170 SM00091 PAS domain ATY42_11170 SM00387 Histidine kinase-like ATPases ATY42_11170 SM00388 His Kinase A (phosphoacceptor) domain ATY42_11170 SM00448 cheY-homologous receiver domain ATY42_11200 SM00267 diguanylate cyclase ATY42_11245 SM00382 ATPases associated with a variety of cellular activities ATY42_11290 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY42_11320 SM00631 ATY42_11320 ATY42_11325 SM01217 ATY42_11325 ATY42_11340 SM00052 Putative diguanylate phosphodiesterase ATY42_11340 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY42_11340 SM00267 diguanylate cyclase ATY42_11410 SM00646 ATY42_11410 ATY42_11435 SM00869 Autotransporter beta-domain ATY42_11455 SM00387 Histidine kinase-like ATPases ATY42_11455 SM00388 His Kinase A (phosphoacceptor) domain ATY42_11460 SM00421 helix_turn_helix, Lux Regulon ATY42_11460 SM00448 cheY-homologous receiver domain ATY42_11465 SM00869 Autotransporter beta-domain ATY42_11485 SM00830 Chorismate mutase type II ATY42_11510 SM00240 Forkhead associated domain ATY42_11530 SM00345 helix_turn_helix gluconate operon transcriptional repressor ATY42_11530 SM00866 ATY42_11530 ATY42_11580 SM00434 DNA Topoisomerase IV ATY42_11600 SM00292 breast cancer carboxy-terminal domain ATY42_11600 SM00532 Ligase N family ATY42_11610 SM00771 ZipA, C-terminal domain (FtsZ-binding) ATY42_11615 SM00968 SMC proteins Flexible Hinge Domain ATY42_11670 SM00947 Carbonic anhydrase ATY42_11695 SM00479 ATY42_11695 ATY42_11725 SM00981 ATY42_11725 ATY42_11740 SM00382 ATPases associated with a variety of cellular activities ATY42_11760 SM00644 ATY42_11760 ATY42_11770 SM00450 Rhodanese Homology Domain ATY42_11795 SM00478 endonuclease III ATY42_11805 SM00947 Carbonic anhydrase ATY42_11860 SM00382 ATPases associated with a variety of cellular activities ATY42_11875 SM00479 ATY42_11875 ATY42_11930 SM01323 ATY42_11930 ATY42_11945 SM00344 helix_turn_helix ASNC type ATY42_12050 SM00387 Histidine kinase-like ATPases ATY42_12070 SM00450 Rhodanese Homology Domain ATY42_12080 SM01126 ATY42_12080 ATY42_12140 SM00852 Probable molybdopterin binding domain ATY42_12145 SM00382 ATPases associated with a variety of cellular activities ATY42_12150 SM00564 beta-propeller repeat ATY42_12165 SM00028 Tetratricopeptide repeats ATY42_12175 SM00562 ATY42_12175 ATY42_12215 SM00382 ATPases associated with a variety of cellular activities ATY42_12235 SM00382 ATPases associated with a variety of cellular activities ATY42_12235 SM00843 ATY42_12235 ATY42_12265 SM00316 Ribosomal protein S1-like RNA-binding domain ATY42_12270 SM00382 ATPases associated with a variety of cellular activities ATY42_12270 SM01086 C-terminal, D2-small domain, of ClpB protein ATY42_12295 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY42_12310 SM00052 Putative diguanylate phosphodiesterase ATY42_12310 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY42_12310 SM00091 PAS domain ATY42_12310 SM00267 diguanylate cyclase ATY42_12315 SM00091 PAS domain ATY42_12315 SM00387 Histidine kinase-like ATPases ATY42_12320 SM00052 Putative diguanylate phosphodiesterase ATY42_12320 SM00267 diguanylate cyclase ATY42_12320 SM00448 cheY-homologous receiver domain ATY42_12325 SM00387 Histidine kinase-like ATPases ATY42_12340 SM00858 ATY42_12340 ATY42_12345 SM00260 Two component signalling adaptor domain ATY42_12345 SM00448 cheY-homologous receiver domain ATY42_12390 SM00047 Lysozyme subfamily 2 ATY42_12430 SM00421 helix_turn_helix, Lux Regulon ATY42_12430 SM00448 cheY-homologous receiver domain ATY42_12440 SM00448 cheY-homologous receiver domain ATY42_12445 SM00382 ATPases associated with a variety of cellular activities ATY42_12465 SM00822 ATY42_12465 ATY42_12470 SM00822 ATY42_12470 ATY42_12520 SM00382 ATPases associated with a variety of cellular activities ATY42_12570 SM00267 diguanylate cyclase ATY42_12575 SM00267 diguanylate cyclase ATY42_12580 SM00052 Putative diguanylate phosphodiesterase ATY42_12580 SM00267 diguanylate cyclase ATY42_12595 SM00382 ATPases associated with a variety of cellular activities ATY42_12595 SM00962 SRP54-type protein, GTPase domain ATY42_12610 SM00448 cheY-homologous receiver domain ATY42_12620 SM00073 Histidine Phosphotransfer domain ATY42_12620 SM00260 Two component signalling adaptor domain ATY42_12620 SM00387 Histidine kinase-like ATPases ATY42_12620 SM01231 ATY42_12620 ATY42_12735 SM01126 ATY42_12735 ATY42_12750 SM00382 ATPases associated with a variety of cellular activities ATY42_12755 SM00382 ATPases associated with a variety of cellular activities ATY42_12790 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ATY42_12800 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase ATY42_12820 SM00859 Semialdehyde dehydrogenase, NAD binding domain ATY42_12860 SM00840 ATY42_12860 ATY42_12875 SM00245 tail specific protease ATY42_12890 SM01234 ATY42_12890 ATY42_12995 SM00841 Elongation factor P, C-terminal ATY42_12995 SM01185 ATY42_12995 ATY42_13005 SM00052 Putative diguanylate phosphodiesterase ATY42_13005 SM00267 diguanylate cyclase ATY42_13005 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY42_13045 SM00382 ATPases associated with a variety of cellular activities ATY42_13050 SM00382 ATPases associated with a variety of cellular activities ATY42_13050 SM00487 DEAD-like helicases superfamily ATY42_13050 SM00490 helicase superfamily c-terminal domain ATY42_13075 SM00357 Cold shock protein domain ATY42_13085 SM01322 ATY42_13085 ATY42_13095 SM00052 Putative diguanylate phosphodiesterase ATY42_13095 SM00267 diguanylate cyclase ATY42_13110 SM00822 ATY42_13110 ATY42_13130 SM00853 MutL C terminal dimerisation domain ATY42_13130 SM01340 ATY42_13130 ATY42_13135 SM00646 ATY42_13135 ATY42_13185 SM00474 3'-5' exonuclease ATY42_13200 SM00528 Domain in histone-like proteins of HNS family ATY42_13235 SM01126 ATY42_13235 ATY42_13305 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY42_13330 SM00116 Domain in cystathionine beta-synthase and other proteins. ATY42_13330 SM01091 Transporter associated domain ATY42_13390 SM01230 ATY42_13390 ATY42_13400 SM01230 ATY42_13400 ATY42_13410 SM00267 diguanylate cyclase ATY42_13410 SM00448 cheY-homologous receiver domain ATY42_13465 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY42_13465 SM00091 PAS domain ATY42_13465 SM00387 Histidine kinase-like ATPases ATY42_13465 SM00388 His Kinase A (phosphoacceptor) domain ATY42_13465 SM00448 cheY-homologous receiver domain ATY42_13465 SM01079 ATY42_13465 ATY42_13470 SM00448 cheY-homologous receiver domain ATY42_13470 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY42_13505 SM01126 ATY42_13505 ATY42_13515 SM00354 helix_turn _helix lactose operon repressor ATY42_13745 SM00260 Two component signalling adaptor domain ATY42_13755 SM00448 cheY-homologous receiver domain ATY42_13760 SM00073 Histidine Phosphotransfer domain ATY42_13760 SM00260 Two component signalling adaptor domain ATY42_13760 SM00387 Histidine kinase-like ATPases ATY42_13760 SM01231 ATY42_13760 ATY42_13785 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY42_13790 SM01126 ATY42_13790 ATY42_13795 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY42_13795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY42_13800 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY42_13800 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY42_13805 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY42_13805 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY42_13810 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY42_13810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY42_13815 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY42_13815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY42_13825 SM00260 Two component signalling adaptor domain ATY42_13845 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ATY42_13845 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY42_13850 SM00138 Methyltransferase, chemotaxis proteins ATY42_13860 SM00448 cheY-homologous receiver domain ATY42_13865 SM00052 Putative diguanylate phosphodiesterase ATY42_13865 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY42_13865 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY42_13865 SM00091 PAS domain ATY42_13865 SM00267 diguanylate cyclase ATY42_13885 SM00966 SpoVT / AbrB like domain ATY42_13910 SM00073 Histidine Phosphotransfer domain ATY42_13910 SM00387 Histidine kinase-like ATPases ATY42_13910 SM00388 His Kinase A (phosphoacceptor) domain ATY42_13910 SM00448 cheY-homologous receiver domain ATY42_13920 SM00448 cheY-homologous receiver domain ATY42_13920 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY42_13930 SM00937 ATY42_13930 ATY42_13935 SM00850 LytTr DNA-binding domain ATY42_13975 SM00851 MGS-like domain ATY42_13975 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ATY42_13985 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain ATY42_14035 SM00899 ATY42_14035 ATY42_14055 SM00822 ATY42_14055 ATY42_14060 SM00841 Elongation factor P, C-terminal ATY42_14060 SM01185 ATY42_14060 ATY42_14110 SM00758 ATY42_14110 ATY42_14130 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ATY42_14155 SM01130 ATY42_14155 ATY42_14175 SM00670 Large family of predicted nucleotide-binding domains ATY42_14270 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ATY42_14280 SM00382 ATPases associated with a variety of cellular activities ATY42_14320 SM00382 ATPases associated with a variety of cellular activities ATY42_14330 SM01103 ATY42_14330 ATY42_14340 SM00257 Lysin motif ATY42_14360 SM00463 Small MutS-related domain ATY42_14385 SM01192 ATY42_14385 ATY42_14385 SM01193 ATY42_14385 ATY42_14410 SM00387 Histidine kinase-like ATPases ATY42_14410 SM00433 TopoisomeraseII ATY42_14440 SM01091 Transporter associated domain ATY42_14465 SM00382 ATPases associated with a variety of cellular activities ATY42_14475 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY42_14755 SM00448 cheY-homologous receiver domain ATY42_14755 SM00862 Transcriptional regulatory protein, C terminal ATY42_14765 SM00387 Histidine kinase-like ATPases ATY42_14805 SM00331 Sigma factor PP2C-like phosphatases ATY42_14805 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ATY42_14830 SM00240 Forkhead associated domain ATY42_14860 SM00382 ATPases associated with a variety of cellular activities ATY42_14860 SM01086 C-terminal, D2-small domain, of ClpB protein ATY42_14990 SM00363 S4 RNA-binding domain ATY42_14995 SM00316 Ribosomal protein S1-like RNA-binding domain ATY42_15015 SM00421 helix_turn_helix, Lux Regulon ATY42_15015 SM00448 cheY-homologous receiver domain ATY42_15020 SM00450 Rhodanese Homology Domain ATY42_15045 SM00984 UDP binding domain ATY42_15095 SM01126 ATY42_15095 ATY42_15105 SM01126 ATY42_15105 ATY42_15115 SM01012 ATY42_15115 ATY42_15155 SM00852 Probable molybdopterin binding domain ATY42_15255 SM00944 Pro-kumamolisin, activation domain ATY42_15320 SM01130 ATY42_15320 ATY42_15345 SM00342 helix_turn_helix, arabinose operon control protein ATY42_15350 SM00382 ATPases associated with a variety of cellular activities ATY42_15350 SM00962 SRP54-type protein, GTPase domain ATY42_15350 SM00963 SRP54-type protein, helical bundle domain ATY42_15360 SM00478 endonuclease III ATY42_15370 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY42_15370 SM00091 PAS domain ATY42_15370 SM00387 Histidine kinase-like ATPases ATY42_15370 SM00388 His Kinase A (phosphoacceptor) domain ATY42_15370 SM00448 cheY-homologous receiver domain ATY42_15395 SM01126 ATY42_15395 ATY42_15540 SM00422 helix_turn_helix, mercury resistance ATY42_15545 SM00411 bacterial (prokaryotic) histone like domain ATY42_15550 SM00873 B3/4 domain ATY42_15550 SM00874 tRNA synthetase B5 domain ATY42_15550 SM00896 Ferredoxin-fold anticodon binding domain ATY42_15575 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ATY42_15605 SM00487 DEAD-like helicases superfamily ATY42_15605 SM00490 helicase superfamily c-terminal domain ATY42_15685 SM01001 AIR carboxylase ATY42_15705 SM00316 Ribosomal protein S1-like RNA-binding domain ATY42_15705 SM00322 K homology RNA-binding domain ATY42_15710 SM01387 ATY42_15710 ATY42_15730 SM00316 Ribosomal protein S1-like RNA-binding domain ATY42_15730 SM00322 K homology RNA-binding domain ATY42_15780 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ATY42_15785 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ATY42_15830 SM00822 ATY42_15830 ATY42_15855 SM00052 Putative diguanylate phosphodiesterase ATY42_15855 SM00267 diguanylate cyclase ATY42_15855 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY42_15920 SM00859 Semialdehyde dehydrogenase, NAD binding domain ATY42_15950 SM00257 Lysin motif ATY42_15980 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY42_16020 SM01160 ATY42_16020 ATY42_16030 SM01126 ATY42_16030 ATY42_16080 SM00098 Alkaline phosphatase homologues ATY42_16085 SM00977 TilS substrate C-terminal domain ATY42_16135 SM00316 Ribosomal protein S1-like RNA-binding domain ATY42_16220 SM01126 ATY42_16220 ATY42_16270 SM01126 ATY42_16270 ATY42_16285 SM00642 Alpha-amylase domain ATY42_16315 SM01126 ATY42_16315 ATY42_16345 SM00528 Domain in histone-like proteins of HNS family ATY42_16385 SM01126 ATY42_16385 ATY42_16395 SM00869 Autotransporter beta-domain ATY42_16480 SM00967 RNA 2'-O ribose methyltransferase substrate binding ATY42_16500 SM01126 ATY42_16500 ATY42_16565 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY42_16565 SM00387 Histidine kinase-like ATPases ATY42_16600 SM00506 Appr-1"-p processing enzyme ATY42_16650 SM01060 ATY42_16650 ATY42_16670 SM01126 ATY42_16670 ATY42_16685 SM00091 PAS domain ATY42_16685 SM00342 helix_turn_helix, arabinose operon control protein ATY42_16755 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY42_16760 SM00481 DNA polymerase alpha chain like domain ATY42_16780 SM00966 SpoVT / AbrB like domain ATY42_16805 SM00855 Phosphoglycerate mutase family ATY42_16835 SM00220 Serine/Threonine protein kinases, catalytic domain ATY42_16845 SM00487 DEAD-like helicases superfamily ATY42_16890 SM00487 DEAD-like helicases superfamily ATY42_16890 SM00490 helicase superfamily c-terminal domain ATY42_16970 SM00382 ATPases associated with a variety of cellular activities ATY42_16970 SM01086 C-terminal, D2-small domain, of ClpB protein ATY42_17230 SM00478 endonuclease III ATY42_17255 SM00421 helix_turn_helix, Lux Regulon ATY42_17255 SM00448 cheY-homologous receiver domain ATY42_17290 SM00387 Histidine kinase-like ATPases ATY42_17290 SM00388 His Kinase A (phosphoacceptor) domain ATY42_17295 SM00448 cheY-homologous receiver domain ATY42_17295 SM00862 Transcriptional regulatory protein, C terminal ATY42_17330 SM00382 ATPases associated with a variety of cellular activities ATY42_17360 SM00990 ATY42_17360 ATY42_17415 SM00662 RNA polymerases D ATY42_17420 SM00363 S4 RNA-binding domain ATY42_17420 SM01390 ATY42_17420 ATY42_17480 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ATY42_17485 SM01374 ATY42_17485 ATY42_17505 SM00322 K homology RNA-binding domain ATY42_17520 SM01382 ATY42_17520 ATY42_17520 SM01383 ATY42_17520 ATY42_17540 SM01403 ATY42_17540 ATY42_17550 SM00838 Elongation factor G C-terminus ATY42_17550 SM00889 Elongation factor G, domain IV ATY42_17565 SM00663 RNA polymerase I subunit A N-terminus ATY42_17590 SM00649 Ribosomal protein L11/L12 ATY42_17595 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. ATY42_17595 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ATY42_17645 SM01400 ATY42_17645 ATY42_17665 SM00028 Tetratricopeptide repeats ATY42_17675 SM00937 ATY42_17675 ATY42_17680 SM00028 Tetratricopeptide repeats ATY42_17685 SM00852 Probable molybdopterin binding domain ATY42_17800 SM01002 Alanine dehydrogenase/PNT, C-terminal domain ATY42_17800 SM01003 Alanine dehydrogenase/PNT, N-terminal domain ATY42_17815 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ATY42_17815 SM00475 5'-3' exonuclease ATY42_17890 SM01126 ATY42_17890 ATY42_17950 SM00448 cheY-homologous receiver domain ATY42_17950 SM00862 Transcriptional regulatory protein, C terminal ATY42_17955 SM00387 Histidine kinase-like ATPases ATY42_17955 SM00388 His Kinase A (phosphoacceptor) domain ATY42_17975 SM00014 Acid phosphatase homologues ATY42_18015 SM00855 Phosphoglycerate mutase family ATY42_18035 SM00829 Enoylreductase ATY42_18045 SM00382 ATPases associated with a variety of cellular activities ATY42_18090 SM00829 Enoylreductase ATY42_18135 SM00387 Histidine kinase-like ATPases ATY42_18135 SM00448 cheY-homologous receiver domain ATY42_18140 SM00448 cheY-homologous receiver domain ATY42_18240 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY42_18285 SM01126 ATY42_18285 ATY42_18340 SM00650 Ribosomal RNA adenine dimethylases ATY42_18400 SM00387 Histidine kinase-like ATPases ATY42_18400 SM00388 His Kinase A (phosphoacceptor) domain ATY42_18405 SM00448 cheY-homologous receiver domain ATY42_18405 SM00862 Transcriptional regulatory protein, C terminal ATY42_18415 SM00382 ATPases associated with a variety of cellular activities ATY42_18435 SM00382 ATPases associated with a variety of cellular activities ATY42_18555 SM00996 S-adenosyl-L-homocysteine hydrolase ATY42_18555 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ATY42_18610 SM00829 Enoylreductase ATY42_18645 SM00957 SecA DEAD-like domain ATY42_18645 SM00958 SecA preprotein cross-linking domain ATY42_18665 SM00864 Tubulin/FtsZ family, GTPase domain ATY42_18665 SM00865 Tubulin/FtsZ family, C-terminal domain ATY42_18670 SM00842 Cell division protein FtsA ATY42_18770 SM00448 cheY-homologous receiver domain ATY42_18770 SM00862 Transcriptional regulatory protein, C terminal ATY42_18775 SM00387 Histidine kinase-like ATPases ATY42_18775 SM00388 His Kinase A (phosphoacceptor) domain ATY42_18885 SM00382 ATPases associated with a variety of cellular activities ATY42_18915 SM00829 Enoylreductase ATY42_18930 SM00448 cheY-homologous receiver domain ATY42_18930 SM00862 Transcriptional regulatory protein, C terminal ATY42_18935 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY42_18935 SM00387 Histidine kinase-like ATPases ATY42_18935 SM00388 His Kinase A (phosphoacceptor) domain ATY42_19075 SM01126 ATY42_19075 ATY42_19105 SM01126 ATY42_19105 ATY42_19150 SM00354 helix_turn _helix lactose operon repressor ATY42_19160 SM00345 helix_turn_helix gluconate operon transcriptional repressor ATY42_19160 SM00866 ATY42_19160 ATY42_19215 SM00387 Histidine kinase-like ATPases ATY42_19215 SM00388 His Kinase A (phosphoacceptor) domain ATY42_19215 SM00448 cheY-homologous receiver domain ATY42_19220 SM00448 cheY-homologous receiver domain ATY42_19225 SM00387 Histidine kinase-like ATPases ATY42_19225 SM00388 His Kinase A (phosphoacceptor) domain ATY42_19230 SM00749 bacterial OsmY and nodulation domain ATY42_19240 SM01350 ATY42_19240 ATY42_19290 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY42_19290 SM00245 tail specific protease ATY42_19295 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY42_19315 SM00936 Penicillin-binding protein 5, C-terminal domain ATY42_19385 SM00268 Actin ATY42_19440 SM00267 diguanylate cyclase ATY42_19445 SM01263 ATY42_19445 ATY42_19460 SM00382 ATPases associated with a variety of cellular activities ATY42_19460 SM01086 C-terminal, D2-small domain, of ClpB protein ATY42_19540 SM00448 cheY-homologous receiver domain ATY42_19540 SM00850 LytTr DNA-binding domain ATY42_19565 SM00267 diguanylate cyclase ATY42_19580 SM00637 ATY42_19580 ATY42_19595 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY42_19595 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ATY42_19595 SM00091 PAS domain ATY42_19595 SM00267 diguanylate cyclase ATY42_19605 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ATY42_19675 SM00060 Fibronectin type 3 domain ATY42_19775 SM00046 Diacylglycerol kinase catalytic domain (presumed) ATY42_19790 SM00271 DnaJ molecular chaperone homology domain ATY42_19880 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY42_19910 SM01126 ATY42_19910 ATY42_20025 SM00644 ATY42_20025 ATY42_20035 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ATY42_20050 SM01126 ATY42_20050 ATY42_20120 SM01126 ATY42_20120 ATY42_20140 SM01217 ATY42_20140 ATY42_20145 SM00905 Dihydroneopterin aldolase ATY42_20170 SM00400 zinc finger ATY42_20170 SM00493 ATY42_20170 ATY42_20170 SM00766 DNA primase DnaG DnaB-binding ATY42_20265 SM01126 ATY42_20265 ATY42_20320 SM00100 Cyclic nucleotide-monophosphate binding domain ATY42_20320 SM00419 helix_turn_helix, cAMP Regulatory protein ATY42_20340 SM00903 Flavin reductase like domain ATY42_20475 SM01150 ATY42_20475 ATY42_20485 SM01126 ATY42_20485 ATY42_20490 SM01126 ATY42_20490 ATY42_20505 SM00450 Rhodanese Homology Domain ATY42_20530 SM00387 Histidine kinase-like ATPases ATY42_20530 SM00388 His Kinase A (phosphoacceptor) domain ATY42_20535 SM00382 ATPases associated with a variety of cellular activities ATY42_20535 SM00448 cheY-homologous receiver domain ATY42_20615 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY42_20620 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ATY42_20690 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ATY42_20690 SM00474 3'-5' exonuclease ATY42_20690 SM00475 5'-3' exonuclease ATY42_20690 SM00482 DNA polymerase A domain ATY42_20775 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ATY42_20775 SM00331 Sigma factor PP2C-like phosphatases ATY42_20790 SM00867 YceI-like domain ATY42_20820 SM00944 Pro-kumamolisin, activation domain ATY42_20865 SM01126 ATY42_20865 ATY42_20910 SM00883 Chaperonin 10 Kd subunit ATY42_20950 SM00986 Uracil DNA glycosylase superfamily ATY42_20950 SM00987 UreE urease accessory protein, C-terminal domain ATY42_20955 SM00448 cheY-homologous receiver domain ATY42_20965 SM00382 ATPases associated with a variety of cellular activities ATY42_20970 SM00487 DEAD-like helicases superfamily ATY42_20970 SM00490 helicase superfamily c-terminal domain ATY42_20980 SM00357 Cold shock protein domain ATY42_20980 SM00382 ATPases associated with a variety of cellular activities ATY42_20980 SM00959 Rho termination factor, N-terminal domain ATY42_21040 SM00563 Phosphate acyltransferases ATY42_21155 SM00388 His Kinase A (phosphoacceptor) domain ATY42_21160 SM00387 Histidine kinase-like ATPases ATY42_21165 SM00448 cheY-homologous receiver domain ATY42_21165 SM00862 Transcriptional regulatory protein, C terminal ATY42_21235 SM01126 ATY42_21235 ATY42_21330 SM00878 Biotin carboxylase C-terminal domain ATY42_21400 SM00833 Cobalamin synthesis protein cobW C-terminal domain ATY42_21445 SM00836 DALR anticodon binding domain ATY42_21455 SM00382 ATPases associated with a variety of cellular activities ATY42_21535 SM00354 helix_turn _helix lactose operon repressor ATY42_21550 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ATY42_21560 SM00758 ATY42_21560 ATY42_21560 SM01217 ATY42_21560 ATY42_21590 SM00633 Glycosyl hydrolase family 10 ATY42_21595 SM00633 Glycosyl hydrolase family 10 ATY42_21635 SM01126 ATY42_21635 ATY42_21700 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY42_21735 SM00530 Helix-turn-helix XRE-family like proteins ATY42_21785 SM00530 Helix-turn-helix XRE-family like proteins ATY42_21855 SM00382 ATPases associated with a variety of cellular activities ATY42_21855 SM00448 cheY-homologous receiver domain ATY42_21860 SM00387 Histidine kinase-like ATPases ATY42_21860 SM00388 His Kinase A (phosphoacceptor) domain ATY42_21870 SM00938 Nitrogen regulatory protein P-II ATY42_21875 SM01230 ATY42_21875 ATY42_21900 SM00028 Tetratricopeptide repeats ATY42_21915 SM00563 Phosphate acyltransferases ATY42_21925 SM00155 Phospholipase D. Active site motifs. ATY42_21930 SM00867 YceI-like domain ATY42_21935 SM00855 Phosphoglycerate mutase family ATY42_21960 SM00530 Helix-turn-helix XRE-family like proteins ATY42_21990 SM00382 ATPases associated with a variety of cellular activities ATY42_22005 SM00382 ATPases associated with a variety of cellular activities ATY42_22020 SM01126 ATY42_22020 ATY42_22060 SM00829 Enoylreductase ATY42_22090 SM00487 DEAD-like helicases superfamily ATY42_22090 SM00490 helicase superfamily c-terminal domain ATY42_22090 SM00847 Helicase associated domain (HA2) Add an annotation ATY42_22100 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ATY42_22150 SM00421 helix_turn_helix, Lux Regulon ATY42_22150 SM00448 cheY-homologous receiver domain ATY42_22270 SM00155 Phospholipase D. Active site motifs. ATY42_22295 SM01126 ATY42_22295 ATY42_22340 SM00729 Elongator protein 3, MiaB family, Radical SAM ATY42_22370 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ATY42_22370 SM00245 tail specific protease ATY42_22445 SM00347 helix_turn_helix multiple antibiotic resistance protein ATY42_22585 SM00014 Acid phosphatase homologues ATY42_22595 SM00028 Tetratricopeptide repeats