APZ20_00005	SM00382	ATPases associated with a variety of cellular activities
APZ20_00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
APZ20_00010	SM00480	DNA polymerase III beta subunit
APZ20_00020	SM00387	Histidine kinase-like ATPases
APZ20_00020	SM00433	TopoisomeraseII
APZ20_00035	SM00028	Tetratricopeptide repeats
APZ20_00070	SM00155	Phospholipase D. Active site motifs.
APZ20_00190	SM01126	APZ20_00190
APZ20_00270	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
APZ20_00290	SM00369	Leucine-rich repeats, typical (most populated) subfamily
APZ20_00395	SM00382	ATPases associated with a variety of cellular activities
APZ20_00490	SM00267	diguanylate cyclase
APZ20_00500	SM00642	Alpha-amylase domain
APZ20_00505	SM00642	Alpha-amylase domain
APZ20_00515	SM00642	Alpha-amylase domain
APZ20_00525	SM00642	Alpha-amylase domain
APZ20_00555	SM01126	APZ20_00555
APZ20_00600	SM00487	DEAD-like helicases superfamily
APZ20_00600	SM00490	helicase superfamily c-terminal domain
APZ20_00625	SM01126	APZ20_00625
APZ20_00650	SM00382	ATPases associated with a variety of cellular activities
APZ20_00675	SM00382	ATPases associated with a variety of cellular activities
APZ20_00695	SM01126	APZ20_00695
APZ20_00720	SM00487	DEAD-like helicases superfamily
APZ20_00720	SM00490	helicase superfamily c-terminal domain
APZ20_00795	SM01126	APZ20_00795
APZ20_00830	SM00354	helix_turn _helix lactose operon repressor
APZ20_00850	SM00642	Alpha-amylase domain
APZ20_00855	SM00642	Alpha-amylase domain
APZ20_00860	SM00642	Alpha-amylase domain
APZ20_00875	SM01126	APZ20_00875
APZ20_00910	SM00382	ATPases associated with a variety of cellular activities
APZ20_00920	SM00938	Nitrogen regulatory protein P-II
APZ20_00930	SM01126	APZ20_00930
APZ20_00985	SM01228	APZ20_00985
APZ20_01050	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
APZ20_01050	SM00388	His Kinase A (phosphoacceptor) domain
APZ20_01085	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
APZ20_01105	SM00354	helix_turn _helix lactose operon repressor
APZ20_01115	SM00563	Phosphate acyltransferases
APZ20_01120	SM00829	Enoylreductase
APZ20_01200	SM00382	ATPases associated with a variety of cellular activities
APZ20_01215	SM00382	ATPases associated with a variety of cellular activities
APZ20_01245	SM00530	Helix-turn-helix XRE-family like proteins 
APZ20_01270	SM00855	Phosphoglycerate mutase family
APZ20_01275	SM00867	YceI-like domain 
APZ20_01280	SM00155	Phospholipase D. Active site motifs.
APZ20_01290	SM00563	Phosphate acyltransferases
APZ20_01305	SM00028	Tetratricopeptide repeats
APZ20_01330	SM01230	APZ20_01330
APZ20_01335	SM00938	Nitrogen regulatory protein P-II
APZ20_01345	SM00387	Histidine kinase-like ATPases
APZ20_01345	SM00388	His Kinase A (phosphoacceptor) domain
APZ20_01350	SM00382	ATPases associated with a variety of cellular activities
APZ20_01350	SM00448	cheY-homologous receiver domain
APZ20_01370	SM01126	APZ20_01370
APZ20_01425	SM00530	Helix-turn-helix XRE-family like proteins 
APZ20_01475	SM00530	Helix-turn-helix XRE-family like proteins 
APZ20_01500	SM00347	helix_turn_helix multiple antibiotic resistance protein
APZ20_01600	SM00633	Glycosyl hydrolase family 10
APZ20_01605	SM00633	Glycosyl hydrolase family 10
APZ20_01635	SM00758	APZ20_01635
APZ20_01635	SM01217	APZ20_01635
APZ20_01645	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
APZ20_01660	SM00354	helix_turn _helix lactose operon repressor
APZ20_01740	SM00382	ATPases associated with a variety of cellular activities
APZ20_01750	SM00836	DALR anticodon binding domain
APZ20_01795	SM00833	Cobalamin synthesis protein cobW C-terminal domain
APZ20_01865	SM00878	Biotin carboxylase C-terminal domain
APZ20_01950	SM01126	APZ20_01950
APZ20_02020	SM00448	cheY-homologous receiver domain
APZ20_02020	SM00862	Transcriptional regulatory protein, C terminal
APZ20_02025	SM00387	Histidine kinase-like ATPases
APZ20_02030	SM00388	His Kinase A (phosphoacceptor) domain
APZ20_02155	SM00563	Phosphate acyltransferases
APZ20_02220	SM00357	Cold shock protein domain
APZ20_02220	SM00382	ATPases associated with a variety of cellular activities
APZ20_02220	SM00959	Rho termination factor, N-terminal domain
APZ20_02230	SM00487	DEAD-like helicases superfamily
APZ20_02230	SM00490	helicase superfamily c-terminal domain
APZ20_02235	SM00382	ATPases associated with a variety of cellular activities
APZ20_02245	SM00448	cheY-homologous receiver domain
APZ20_02250	SM00986	Uracil DNA glycosylase superfamily
APZ20_02250	SM00987	UreE urease accessory protein, C-terminal domain 
APZ20_02290	SM00883	Chaperonin 10 Kd subunit
APZ20_02335	SM01126	APZ20_02335
APZ20_02375	SM00944	Pro-kumamolisin, activation domain
APZ20_02405	SM00867	YceI-like domain 
APZ20_02420	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
APZ20_02420	SM00331	Sigma factor PP2C-like phosphatases
APZ20_02495	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
APZ20_02535	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
APZ20_02535	SM00474	3'-5' exonuclease
APZ20_02535	SM00475	5'-3' exonuclease
APZ20_02535	SM00482	DNA polymerase A domain
APZ20_02595	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
APZ20_02600	SM00347	helix_turn_helix multiple antibiotic resistance protein
APZ20_02680	SM00382	ATPases associated with a variety of cellular activities
APZ20_02680	SM00448	cheY-homologous receiver domain
APZ20_02685	SM00387	Histidine kinase-like ATPases
APZ20_02685	SM00388	His Kinase A (phosphoacceptor) domain
APZ20_02710	SM00450	Rhodanese Homology Domain
APZ20_02725	SM01126	APZ20_02725
APZ20_02735	SM01150	APZ20_02735
APZ20_02795	SM01126	APZ20_02795
APZ20_02810	SM00382	ATPases associated with a variety of cellular activities
APZ20_02870	SM00400	zinc finger
APZ20_02870	SM00493	APZ20_02870
APZ20_02870	SM00766	DNA primase DnaG DnaB-binding
APZ20_02905	SM00905	Dihydroneopterin aldolase
APZ20_02910	SM01217	APZ20_02910
APZ20_02920	SM01126	APZ20_02920
APZ20_02940	SM01126	APZ20_02940
APZ20_02950	SM01126	APZ20_02950
APZ20_03010	SM01126	APZ20_03010
APZ20_03025	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
APZ20_03035	SM00644	APZ20_03035
APZ20_03155	SM01126	APZ20_03155
APZ20_03185	SM00347	helix_turn_helix multiple antibiotic resistance protein
APZ20_03270	SM00271	DnaJ molecular chaperone homology domain
APZ20_03285	SM00046	Diacylglycerol kinase catalytic domain (presumed)
APZ20_03385	SM00060	Fibronectin type 3 domain
APZ20_03455	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
APZ20_03465	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
APZ20_03465	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
APZ20_03465	SM00091	PAS domain
APZ20_03465	SM00267	diguanylate cyclase
APZ20_03480	SM00637	APZ20_03480
APZ20_03495	SM00267	diguanylate cyclase
APZ20_03535	SM00448	cheY-homologous receiver domain
APZ20_03535	SM00850	LytTr DNA-binding domain
APZ20_03615	SM00382	ATPases associated with a variety of cellular activities
APZ20_03615	SM01086	C-terminal, D2-small domain, of ClpB protein
APZ20_03630	SM01263	APZ20_03630
APZ20_03635	SM00267	diguanylate cyclase
APZ20_03700	SM00268	Actin
APZ20_03790	SM00936	Penicillin-binding protein 5, C-terminal domain 
APZ20_03810	SM00729	Elongator protein 3, MiaB family, Radical SAM
APZ20_03815	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
APZ20_03815	SM00245	tail specific protease
APZ20_03865	SM01350	APZ20_03865
APZ20_03875	SM00749	bacterial OsmY and nodulation domain
APZ20_03880	SM00387	Histidine kinase-like ATPases
APZ20_03880	SM00388	His Kinase A (phosphoacceptor) domain
APZ20_03885	SM00448	cheY-homologous receiver domain
APZ20_03890	SM00387	Histidine kinase-like ATPases
APZ20_03890	SM00388	His Kinase A (phosphoacceptor) domain
APZ20_03890	SM00448	cheY-homologous receiver domain
APZ20_03950	SM00345	helix_turn_helix gluconate operon transcriptional repressor
APZ20_03950	SM00866	APZ20_03950
APZ20_03960	SM00354	helix_turn _helix lactose operon repressor
APZ20_04000	SM01126	APZ20_04000
APZ20_04020	SM01126	APZ20_04020
APZ20_04155	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
APZ20_04155	SM00387	Histidine kinase-like ATPases
APZ20_04155	SM00388	His Kinase A (phosphoacceptor) domain
APZ20_04160	SM00448	cheY-homologous receiver domain
APZ20_04160	SM00862	Transcriptional regulatory protein, C terminal
APZ20_04180	SM00829	Enoylreductase
APZ20_04210	SM00382	ATPases associated with a variety of cellular activities
APZ20_04320	SM00387	Histidine kinase-like ATPases
APZ20_04320	SM00388	His Kinase A (phosphoacceptor) domain
APZ20_04325	SM00448	cheY-homologous receiver domain
APZ20_04325	SM00862	Transcriptional regulatory protein, C terminal
APZ20_04425	SM00842	Cell division protein FtsA
APZ20_04430	SM00864	Tubulin/FtsZ family, GTPase domain
APZ20_04430	SM00865	Tubulin/FtsZ family, C-terminal domain
APZ20_04450	SM00957	SecA DEAD-like domain
APZ20_04450	SM00958	SecA preprotein cross-linking domain
APZ20_04485	SM00829	Enoylreductase
APZ20_04540	SM00996	S-adenosyl-L-homocysteine hydrolase
APZ20_04540	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
APZ20_04660	SM00382	ATPases associated with a variety of cellular activities
APZ20_04680	SM00382	ATPases associated with a variety of cellular activities
APZ20_04690	SM00448	cheY-homologous receiver domain
APZ20_04690	SM00862	Transcriptional regulatory protein, C terminal
APZ20_04695	SM00387	Histidine kinase-like ATPases
APZ20_04695	SM00388	His Kinase A (phosphoacceptor) domain
APZ20_04755	SM00650	Ribosomal RNA adenine dimethylases
APZ20_04810	SM01126	APZ20_04810
APZ20_04855	SM00347	helix_turn_helix multiple antibiotic resistance protein
APZ20_04955	SM00448	cheY-homologous receiver domain
APZ20_04980	SM00421	helix_turn_helix, Lux Regulon
APZ20_05015	SM01126	APZ20_05015
APZ20_05085	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
APZ20_05085	SM00475	5'-3' exonuclease
APZ20_05100	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
APZ20_05100	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
APZ20_05220	SM00852	Probable molybdopterin binding domain
APZ20_05225	SM00028	Tetratricopeptide repeats
APZ20_05230	SM00937	APZ20_05230
APZ20_05240	SM00028	Tetratricopeptide repeats
APZ20_05260	SM01400	APZ20_05260
APZ20_05310	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
APZ20_05310	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
APZ20_05315	SM00649	Ribosomal protein L11/L12
APZ20_05340	SM00663	RNA polymerase I subunit A N-terminus
APZ20_05355	SM00838	Elongation factor G C-terminus
APZ20_05355	SM00889	Elongation factor G, domain IV
APZ20_05365	SM01403	APZ20_05365
APZ20_05385	SM01382	APZ20_05385
APZ20_05385	SM01383	APZ20_05385
APZ20_05400	SM00322	K homology RNA-binding domain
APZ20_05420	SM01374	APZ20_05420
APZ20_05425	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
APZ20_05485	SM00363	S4 RNA-binding domain
APZ20_05485	SM01390	APZ20_05485
APZ20_05490	SM00662	RNA polymerases D
APZ20_05545	SM00990	APZ20_05545
APZ20_05575	SM00382	ATPases associated with a variety of cellular activities
APZ20_05610	SM00448	cheY-homologous receiver domain
APZ20_05610	SM00862	Transcriptional regulatory protein, C terminal
APZ20_05615	SM00387	Histidine kinase-like ATPases
APZ20_05615	SM00388	His Kinase A (phosphoacceptor) domain
APZ20_05660	SM00421	helix_turn_helix, Lux Regulon
APZ20_05660	SM00448	cheY-homologous receiver domain
APZ20_05675	SM00478	endonuclease III
APZ20_06025	SM00382	ATPases associated with a variety of cellular activities
APZ20_06025	SM01086	C-terminal, D2-small domain, of ClpB protein
APZ20_06085	SM00487	DEAD-like helicases superfamily
APZ20_06085	SM00490	helicase superfamily c-terminal domain
APZ20_06120	SM00487	DEAD-like helicases superfamily
APZ20_06130	SM00220	Serine/Threonine protein kinases, catalytic domain
APZ20_06185	SM00966	SpoVT / AbrB like domain 
APZ20_06205	SM00481	DNA polymerase alpha chain like domain
APZ20_06210	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
APZ20_06260	SM00091	PAS domain
APZ20_06260	SM00342	helix_turn_helix, arabinose operon control protein
APZ20_06280	SM01060	APZ20_06280
APZ20_06340	SM00506	Appr-1"-p processing enzyme
APZ20_06375	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
APZ20_06375	SM00387	Histidine kinase-like ATPases
APZ20_06440	SM01126	APZ20_06440
APZ20_06460	SM00967	RNA 2'-O ribose methyltransferase substrate binding
APZ20_06565	SM00869	Autotransporter beta-domain
APZ20_06575	SM01126	APZ20_06575
APZ20_06610	SM00528	Domain in histone-like proteins of HNS family
APZ20_06640	SM01126	APZ20_06640
APZ20_06645	SM01126	APZ20_06645
APZ20_06655	SM00642	Alpha-amylase domain
APZ20_06670	SM01126	APZ20_06670
APZ20_06725	SM01126	APZ20_06725
APZ20_06825	SM00316	Ribosomal protein S1-like RNA-binding domain
APZ20_06880	SM00977	TilS substrate C-terminal domain
APZ20_06885	SM00098	Alkaline phosphatase homologues
APZ20_06935	SM01126	APZ20_06935
APZ20_06945	SM01160	APZ20_06945
APZ20_06985	SM00729	Elongator protein 3, MiaB family, Radical SAM
APZ20_07020	SM00257	Lysin motif
APZ20_07050	SM00859	Semialdehyde dehydrogenase, NAD binding domain
APZ20_07115	SM00052	Putative diguanylate phosphodiesterase
APZ20_07115	SM00267	diguanylate cyclase
APZ20_07115	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
APZ20_07185	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
APZ20_07190	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
APZ20_07240	SM00316	Ribosomal protein S1-like RNA-binding domain
APZ20_07240	SM00322	K homology RNA-binding domain
APZ20_07260	SM01387	APZ20_07260
APZ20_07265	SM00316	Ribosomal protein S1-like RNA-binding domain
APZ20_07265	SM00322	K homology RNA-binding domain
APZ20_07285	SM01001	AIR carboxylase
APZ20_07370	SM00487	DEAD-like helicases superfamily
APZ20_07370	SM00490	helicase superfamily c-terminal domain
APZ20_07405	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
APZ20_07430	SM00873	B3/4 domain
APZ20_07430	SM00874	tRNA synthetase B5 domain
APZ20_07430	SM00896	Ferredoxin-fold anticodon binding domain
APZ20_07435	SM00411	bacterial (prokaryotic) histone like domain
APZ20_07440	SM00422	helix_turn_helix, mercury resistance
APZ20_07635	SM00448	cheY-homologous receiver domain
APZ20_07645	SM00478	endonuclease III
APZ20_07655	SM00382	ATPases associated with a variety of cellular activities
APZ20_07655	SM00962	SRP54-type protein, GTPase domain
APZ20_07655	SM00963	SRP54-type protein, helical bundle domain
APZ20_07660	SM00342	helix_turn_helix, arabinose operon control protein
APZ20_07685	SM01130	APZ20_07685
APZ20_07750	SM00944	Pro-kumamolisin, activation domain
APZ20_07815	SM01126	APZ20_07815
APZ20_07835	SM00852	Probable molybdopterin binding domain
APZ20_07875	SM01012	APZ20_07875
APZ20_07885	SM01126	APZ20_07885
APZ20_07895	SM01126	APZ20_07895
APZ20_07935	SM00984	UDP binding domain
APZ20_07955	SM00450	Rhodanese Homology Domain
APZ20_07960	SM00421	helix_turn_helix, Lux Regulon
APZ20_07960	SM00448	cheY-homologous receiver domain
APZ20_07980	SM00316	Ribosomal protein S1-like RNA-binding domain
APZ20_07985	SM00363	S4 RNA-binding domain
APZ20_08130	SM00382	ATPases associated with a variety of cellular activities
APZ20_08130	SM01086	C-terminal, D2-small domain, of ClpB protein
APZ20_08160	SM00240	Forkhead associated domain
APZ20_08185	SM00331	Sigma factor PP2C-like phosphatases
APZ20_08185	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
APZ20_08210	SM00387	Histidine kinase-like ATPases
APZ20_08220	SM00448	cheY-homologous receiver domain
APZ20_08220	SM00862	Transcriptional regulatory protein, C terminal
APZ20_08260	SM00060	Fibronectin type 3 domain
APZ20_08455	SM00729	Elongator protein 3, MiaB family, Radical SAM
APZ20_08465	SM00382	ATPases associated with a variety of cellular activities
APZ20_08490	SM01091	Transporter associated domain
APZ20_08520	SM00387	Histidine kinase-like ATPases
APZ20_08520	SM00433	TopoisomeraseII
APZ20_08545	SM01192	APZ20_08545
APZ20_08545	SM01193	APZ20_08545
APZ20_08570	SM00463	Small MutS-related domain
APZ20_08590	SM00257	Lysin motif
APZ20_08600	SM01103	APZ20_08600
APZ20_08610	SM00382	ATPases associated with a variety of cellular activities
APZ20_08650	SM00382	ATPases associated with a variety of cellular activities
APZ20_08660	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
APZ20_08755	SM00670	Large family of predicted nucleotide-binding domains
APZ20_08775	SM01130	APZ20_08775
APZ20_08800	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
APZ20_08820	SM00758	APZ20_08820
APZ20_08865	SM00841	Elongation factor P, C-terminal
APZ20_08865	SM01185	APZ20_08865
APZ20_08870	SM00822	APZ20_08870
APZ20_08890	SM00899	APZ20_08890
APZ20_08940	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
APZ20_08950	SM00851	MGS-like domain
APZ20_08950	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
APZ20_08975	SM01126	APZ20_08975
APZ20_09000	SM00850	LytTr DNA-binding domain
APZ20_09005	SM00937	APZ20_09005
APZ20_09015	SM00448	cheY-homologous receiver domain
APZ20_09015	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
APZ20_09025	SM00073	Histidine Phosphotransfer domain
APZ20_09025	SM00387	Histidine kinase-like ATPases
APZ20_09025	SM00388	His Kinase A (phosphoacceptor) domain
APZ20_09025	SM00448	cheY-homologous receiver domain
APZ20_09050	SM00966	SpoVT / AbrB like domain 
APZ20_09070	SM00052	Putative diguanylate phosphodiesterase
APZ20_09070	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
APZ20_09070	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
APZ20_09070	SM00091	PAS domain
APZ20_09070	SM00267	diguanylate cyclase
APZ20_09075	SM00448	cheY-homologous receiver domain
APZ20_09085	SM00138	Methyltransferase, chemotaxis proteins 
APZ20_09090	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
APZ20_09090	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
APZ20_09110	SM00260	Two component signalling adaptor domain
APZ20_09120	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
APZ20_09120	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
APZ20_09125	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
APZ20_09125	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
APZ20_09130	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
APZ20_09130	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
APZ20_09135	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
APZ20_09135	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
APZ20_09140	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
APZ20_09140	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
APZ20_09145	SM01126	APZ20_09145
APZ20_09160	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
APZ20_09185	SM00073	Histidine Phosphotransfer domain
APZ20_09185	SM00260	Two component signalling adaptor domain
APZ20_09185	SM00387	Histidine kinase-like ATPases
APZ20_09185	SM01231	APZ20_09185
APZ20_09190	SM00448	cheY-homologous receiver domain
APZ20_09200	SM00260	Two component signalling adaptor domain
APZ20_09405	SM00344	helix_turn_helix ASNC type
APZ20_09420	SM01323	APZ20_09420
APZ20_09475	SM00479	APZ20_09475
APZ20_09490	SM00382	ATPases associated with a variety of cellular activities
APZ20_09535	SM00947	Carbonic anhydrase
APZ20_09545	SM00478	endonuclease III
APZ20_09570	SM00450	Rhodanese Homology Domain
APZ20_09580	SM00644	APZ20_09580
APZ20_09610	SM00981	APZ20_09610
APZ20_09640	SM00479	APZ20_09640
APZ20_09665	SM00947	Carbonic anhydrase
APZ20_09720	SM00968	SMC proteins Flexible Hinge Domain
APZ20_09725	SM00771	ZipA, C-terminal domain (FtsZ-binding)
APZ20_09735	SM00292	breast cancer carboxy-terminal domain
APZ20_09735	SM00532	Ligase N family
APZ20_09755	SM00434	DNA Topoisomerase IV
APZ20_09805	SM00345	helix_turn_helix gluconate operon transcriptional repressor
APZ20_09805	SM00866	APZ20_09805
APZ20_09825	SM00240	Forkhead associated domain
APZ20_09850	SM00830	Chorismate mutase type II
APZ20_09880	SM00869	Autotransporter beta-domain
APZ20_09885	SM00421	helix_turn_helix, Lux Regulon
APZ20_09885	SM00448	cheY-homologous receiver domain
APZ20_09890	SM00387	Histidine kinase-like ATPases
APZ20_09890	SM00388	His Kinase A (phosphoacceptor) domain
APZ20_09910	SM00869	Autotransporter beta-domain
APZ20_09930	SM00646	APZ20_09930
APZ20_10000	SM00052	Putative diguanylate phosphodiesterase
APZ20_10000	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
APZ20_10000	SM00267	diguanylate cyclase
APZ20_10015	SM01217	APZ20_10015
APZ20_10020	SM00631	APZ20_10020
APZ20_10050	SM00347	helix_turn_helix multiple antibiotic resistance protein
APZ20_10095	SM00382	ATPases associated with a variety of cellular activities
APZ20_10145	SM00267	diguanylate cyclase
APZ20_10200	SM00382	ATPases associated with a variety of cellular activities
APZ20_10235	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
APZ20_10240	SM00226	Low molecular weight phosphatase family
APZ20_10260	SM00450	Rhodanese Homology Domain
APZ20_10280	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
APZ20_10280	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
APZ20_10280	SM00091	PAS domain
APZ20_10280	SM00387	Histidine kinase-like ATPases
APZ20_10280	SM00388	His Kinase A (phosphoacceptor) domain
APZ20_10280	SM00448	cheY-homologous receiver domain
APZ20_10285	SM00448	cheY-homologous receiver domain
APZ20_10345	SM00382	ATPases associated with a variety of cellular activities
APZ20_10395	SM00382	ATPases associated with a variety of cellular activities
APZ20_10405	SM01126	APZ20_10405
APZ20_10410	SM00849	Metallo-beta-lactamase superfamily
APZ20_10425	SM00382	ATPases associated with a variety of cellular activities
APZ20_10440	SM00226	Low molecular weight phosphatase family
APZ20_10450	SM00278	Helix-hairpin-helix DNA-binding motif class 1
APZ20_10450	SM00465	GIY-YIG type nucleases (URI domain)
APZ20_10495	SM01126	APZ20_10495
APZ20_10615	SM01126	APZ20_10615
APZ20_10805	SM00014	Acid phosphatase homologues
APZ20_10815	SM00387	Histidine kinase-like ATPases
APZ20_10820	SM00448	cheY-homologous receiver domain
APZ20_10830	SM00316	Ribosomal protein S1-like RNA-binding domain
APZ20_10830	SM00732	Likely ribonuclease with RNase H fold.
APZ20_10900	SM00479	APZ20_10900
APZ20_10910	SM00529	Helix-turn-helix diphteria tox regulatory element
APZ20_10920	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
APZ20_10975	SM00116	Domain in cystathionine beta-synthase and other proteins.
APZ20_10975	SM01240	APZ20_10975
APZ20_11025	SM00822	APZ20_11025
APZ20_11045	SM00411	bacterial (prokaryotic) histone like domain
APZ20_11050	SM00316	Ribosomal protein S1-like RNA-binding domain
APZ20_11125	SM00354	helix_turn _helix lactose operon repressor
APZ20_11150	SM00363	S4 RNA-binding domain
APZ20_11180	SM00382	ATPases associated with a variety of cellular activities
APZ20_11265	SM01007	Class II Aldolase and Adducin N-terminal domain
APZ20_11305	SM00450	Rhodanese Homology Domain
APZ20_11315	SM01126	APZ20_11315
APZ20_11375	SM00852	Probable molybdopterin binding domain
APZ20_11380	SM00382	ATPases associated with a variety of cellular activities
APZ20_11385	SM00564	beta-propeller repeat
APZ20_11400	SM00028	Tetratricopeptide repeats
APZ20_11410	SM00562	APZ20_11410
APZ20_11450	SM00382	ATPases associated with a variety of cellular activities
APZ20_11470	SM00382	ATPases associated with a variety of cellular activities
APZ20_11470	SM00843	APZ20_11470
APZ20_11500	SM00316	Ribosomal protein S1-like RNA-binding domain
APZ20_11505	SM00382	ATPases associated with a variety of cellular activities
APZ20_11505	SM01086	C-terminal, D2-small domain, of ClpB protein
APZ20_11530	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
APZ20_11545	SM00052	Putative diguanylate phosphodiesterase
APZ20_11545	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
APZ20_11545	SM00091	PAS domain
APZ20_11545	SM00267	diguanylate cyclase
APZ20_11550	SM00091	PAS domain
APZ20_11550	SM00387	Histidine kinase-like ATPases
APZ20_11555	SM00052	Putative diguanylate phosphodiesterase
APZ20_11555	SM00267	diguanylate cyclase
APZ20_11555	SM00448	cheY-homologous receiver domain
APZ20_11560	SM00387	Histidine kinase-like ATPases
APZ20_11575	SM00858	APZ20_11575
APZ20_11580	SM00260	Two component signalling adaptor domain
APZ20_11580	SM00448	cheY-homologous receiver domain
APZ20_11630	SM00047	Lysozyme subfamily 2
APZ20_11670	SM00421	helix_turn_helix, Lux Regulon
APZ20_11670	SM00448	cheY-homologous receiver domain
APZ20_11680	SM00448	cheY-homologous receiver domain
APZ20_11685	SM00382	ATPases associated with a variety of cellular activities
APZ20_11705	SM00822	APZ20_11705
APZ20_11710	SM00822	APZ20_11710
APZ20_11765	SM00382	ATPases associated with a variety of cellular activities
APZ20_11815	SM00267	diguanylate cyclase
APZ20_11820	SM00267	diguanylate cyclase
APZ20_11825	SM00052	Putative diguanylate phosphodiesterase
APZ20_11825	SM00267	diguanylate cyclase
APZ20_11840	SM00382	ATPases associated with a variety of cellular activities
APZ20_11840	SM00962	SRP54-type protein, GTPase domain
APZ20_11855	SM00448	cheY-homologous receiver domain
APZ20_11865	SM00073	Histidine Phosphotransfer domain
APZ20_11865	SM00260	Two component signalling adaptor domain
APZ20_11865	SM00387	Histidine kinase-like ATPases
APZ20_11865	SM01231	APZ20_11865
APZ20_12000	SM01126	APZ20_12000
APZ20_12010	SM00382	ATPases associated with a variety of cellular activities
APZ20_12015	SM00382	ATPases associated with a variety of cellular activities
APZ20_12050	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
APZ20_12060	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
APZ20_12080	SM00859	Semialdehyde dehydrogenase, NAD binding domain
APZ20_12120	SM00840	APZ20_12120
APZ20_12135	SM00245	tail specific protease
APZ20_12150	SM01234	APZ20_12150
APZ20_12250	SM00841	Elongation factor P, C-terminal
APZ20_12250	SM01185	APZ20_12250
APZ20_12260	SM00052	Putative diguanylate phosphodiesterase
APZ20_12260	SM00267	diguanylate cyclase
APZ20_12260	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
APZ20_12300	SM00382	ATPases associated with a variety of cellular activities
APZ20_12305	SM00382	ATPases associated with a variety of cellular activities
APZ20_12305	SM00487	DEAD-like helicases superfamily
APZ20_12305	SM00490	helicase superfamily c-terminal domain
APZ20_12330	SM00357	Cold shock protein domain
APZ20_12340	SM01322	APZ20_12340
APZ20_12350	SM00052	Putative diguanylate phosphodiesterase
APZ20_12350	SM00267	diguanylate cyclase
APZ20_12365	SM00822	APZ20_12365
APZ20_12385	SM00853	MutL C terminal dimerisation domain
APZ20_12385	SM01340	APZ20_12385
APZ20_12390	SM00646	APZ20_12390
APZ20_12430	SM00474	3'-5' exonuclease
APZ20_12445	SM00528	Domain in histone-like proteins of HNS family
APZ20_12495	SM01126	APZ20_12495
APZ20_12565	SM00729	Elongator protein 3, MiaB family, Radical SAM
APZ20_12590	SM00116	Domain in cystathionine beta-synthase and other proteins.
APZ20_12590	SM01091	Transporter associated domain
APZ20_12650	SM01230	APZ20_12650
APZ20_12660	SM01230	APZ20_12660
APZ20_12670	SM00267	diguanylate cyclase
APZ20_12670	SM00448	cheY-homologous receiver domain
APZ20_12725	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
APZ20_12725	SM00091	PAS domain
APZ20_12725	SM00387	Histidine kinase-like ATPases
APZ20_12725	SM00388	His Kinase A (phosphoacceptor) domain
APZ20_12725	SM00448	cheY-homologous receiver domain
APZ20_12725	SM01079	APZ20_12725
APZ20_12730	SM00448	cheY-homologous receiver domain
APZ20_12730	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
APZ20_12765	SM01126	APZ20_12765
APZ20_12775	SM00354	helix_turn _helix lactose operon repressor
APZ20_12960	SM00387	Histidine kinase-like ATPases
APZ20_13085	SM01126	APZ20_13085
APZ20_13135	SM01126	APZ20_13135
APZ20_13165	SM00967	RNA 2'-O ribose methyltransferase substrate binding
APZ20_13175	SM00316	Ribosomal protein S1-like RNA-binding domain
APZ20_13175	SM00357	Cold shock protein domain
APZ20_13175	SM00955	APZ20_13175
APZ20_13200	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
APZ20_13210	SM01018	B12 binding domain
APZ20_13230	SM00354	helix_turn _helix lactose operon repressor
APZ20_13250	SM00984	UDP binding domain
APZ20_13270	SM00345	helix_turn_helix gluconate operon transcriptional repressor
APZ20_13275	SM00382	ATPases associated with a variety of cellular activities
APZ20_13365	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
APZ20_13375	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
APZ20_13385	SM00861	Transketolase, pyrimidine binding domain
APZ20_13410	SM00382	ATPases associated with a variety of cellular activities
APZ20_13440	SM00271	DnaJ molecular chaperone homology domain
APZ20_13510	SM00507	HNH nucleases
APZ20_13515	SM00861	Transketolase, pyrimidine binding domain
APZ20_13540	SM01126	APZ20_13540
APZ20_13585	SM00347	helix_turn_helix multiple antibiotic resistance protein
APZ20_13590	SM00342	helix_turn_helix, arabinose operon control protein
APZ20_13595	SM00434	DNA Topoisomerase IV
APZ20_13630	SM00710	Parallel beta-helix repeats
APZ20_13630	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
APZ20_13635	SM01172	APZ20_13635
APZ20_13665	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
APZ20_13675	SM00972	Spore Coat Protein U domain
APZ20_13690	SM00972	Spore Coat Protein U domain
APZ20_13745	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
APZ20_13780	SM00481	DNA polymerase alpha chain like domain
APZ20_13800	SM00382	ATPases associated with a variety of cellular activities
APZ20_14140	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
APZ20_14145	SM00869	Autotransporter beta-domain
APZ20_14165	SM00267	diguanylate cyclase
APZ20_14195	SM00487	DEAD-like helicases superfamily
APZ20_14195	SM00490	helicase superfamily c-terminal domain
APZ20_14215	SM00357	Cold shock protein domain
APZ20_14270	SM01118	APZ20_14270
APZ20_14280	SM00448	cheY-homologous receiver domain
APZ20_14295	SM00358	Double-stranded RNA binding motif
APZ20_14295	SM00535	Ribonuclease III family
APZ20_14310	SM00838	Elongation factor G C-terminus
APZ20_14315	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
APZ20_14365	SM00530	Helix-turn-helix XRE-family like proteins 
APZ20_14395	SM00812	Alpha-L-fucosidase
APZ20_14425	SM00387	Histidine kinase-like ATPases
APZ20_14425	SM00388	His Kinase A (phosphoacceptor) domain
APZ20_14425	SM00448	cheY-homologous receiver domain
APZ20_14430	SM00387	Histidine kinase-like ATPases
APZ20_14430	SM00388	His Kinase A (phosphoacceptor) domain
APZ20_14430	SM00448	cheY-homologous receiver domain
APZ20_14435	SM00387	Histidine kinase-like ATPases
APZ20_14435	SM00388	His Kinase A (phosphoacceptor) domain
APZ20_14435	SM00448	cheY-homologous receiver domain
APZ20_14440	SM00867	YceI-like domain 
APZ20_14450	SM00867	YceI-like domain 
APZ20_14505	SM00116	Domain in cystathionine beta-synthase and other proteins.
APZ20_14585	SM00244	prohibitin homologues
APZ20_14630	SM00812	Alpha-L-fucosidase
APZ20_14635	SM00636	APZ20_14635
APZ20_14650	SM00758	APZ20_14650
APZ20_14650	SM01217	APZ20_14650
APZ20_14655	SM00382	ATPases associated with a variety of cellular activities
APZ20_14705	SM01149	APZ20_14705
APZ20_14745	SM00369	Leucine-rich repeats, typical (most populated) subfamily
APZ20_14795	SM00073	Histidine Phosphotransfer domain
APZ20_14795	SM00260	Two component signalling adaptor domain
APZ20_14795	SM00387	Histidine kinase-like ATPases
APZ20_14795	SM00448	cheY-homologous receiver domain
APZ20_14795	SM01231	APZ20_14795
APZ20_14800	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
APZ20_14805	SM00260	Two component signalling adaptor domain
APZ20_14810	SM00448	cheY-homologous receiver domain
APZ20_14815	SM00448	cheY-homologous receiver domain
APZ20_14840	SM00491	APZ20_14840
APZ20_14865	SM00954	Region found in RelA / SpoT proteins
APZ20_14920	SM00382	ATPases associated with a variety of cellular activities
APZ20_14920	SM00487	DEAD-like helicases superfamily
APZ20_14920	SM00490	helicase superfamily c-terminal domain
APZ20_14920	SM00847	Helicase associated domain (HA2)  Add an annotation
APZ20_14930	SM00341	Helicase and RNase D C-terminal
APZ20_14930	SM00487	DEAD-like helicases superfamily
APZ20_14930	SM00490	helicase superfamily c-terminal domain
APZ20_14930	SM00956	APZ20_14930
APZ20_14940	SM00448	cheY-homologous receiver domain
APZ20_15015	SM00382	ATPases associated with a variety of cellular activities
APZ20_15025	SM00278	Helix-hairpin-helix DNA-binding motif class 1
APZ20_15060	SM00834	Putative regulatory protein
APZ20_15100	SM00382	ATPases associated with a variety of cellular activities
APZ20_15125	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
APZ20_15125	SM00534	ATPase domain of DNA mismatch repair MUTS family
APZ20_15250	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
APZ20_15295	SM00904	Riboflavin kinase
APZ20_15460	SM00881	CoA binding domain
APZ20_15470	SM00387	Histidine kinase-like ATPases
APZ20_15470	SM00388	His Kinase A (phosphoacceptor) domain
APZ20_15475	SM00382	ATPases associated with a variety of cellular activities
APZ20_15475	SM00448	cheY-homologous receiver domain
APZ20_15570	SM00382	ATPases associated with a variety of cellular activities
APZ20_15600	SM00448	cheY-homologous receiver domain
APZ20_15600	SM00862	Transcriptional regulatory protein, C terminal
APZ20_15605	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
APZ20_15605	SM00387	Histidine kinase-like ATPases
APZ20_15605	SM00388	His Kinase A (phosphoacceptor) domain
APZ20_15635	SM00363	S4 RNA-binding domain
APZ20_15640	SM00052	Putative diguanylate phosphodiesterase
APZ20_15640	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
APZ20_15640	SM00091	PAS domain
APZ20_15640	SM00267	diguanylate cyclase
APZ20_15645	SM00487	DEAD-like helicases superfamily
APZ20_15645	SM00490	helicase superfamily c-terminal domain
APZ20_15710	SM00829	Enoylreductase
APZ20_15835	SM00357	Cold shock protein domain
APZ20_15910	SM00645	Papain family cysteine protease
APZ20_15930	SM00645	Papain family cysteine protease
APZ20_15945	SM00387	Histidine kinase-like ATPases
APZ20_15945	SM00388	His Kinase A (phosphoacceptor) domain
APZ20_15965	SM00487	DEAD-like helicases superfamily
APZ20_15965	SM00490	helicase superfamily c-terminal domain
APZ20_15965	SM00982	APZ20_15965
APZ20_15965	SM01058	CarD-like/TRCF domain
APZ20_15975	SM00073	Histidine Phosphotransfer domain
APZ20_15975	SM00260	Two component signalling adaptor domain
APZ20_15975	SM00387	Histidine kinase-like ATPases
APZ20_15975	SM01231	APZ20_15975
APZ20_15980	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
APZ20_15980	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
APZ20_15985	SM00260	Two component signalling adaptor domain
APZ20_15990	SM00052	Putative diguanylate phosphodiesterase
APZ20_15990	SM00448	cheY-homologous receiver domain
APZ20_15995	SM00138	Methyltransferase, chemotaxis proteins 
APZ20_16000	SM00448	cheY-homologous receiver domain
APZ20_16020	SM00855	Phosphoglycerate mutase family
APZ20_16165	SM01126	APZ20_16165
APZ20_16180	SM00829	Enoylreductase
APZ20_16185	SM00267	diguanylate cyclase
APZ20_16270	SM00732	Likely ribonuclease with RNase H fold.
APZ20_16310	SM00382	ATPases associated with a variety of cellular activities
APZ20_16330	SM00411	bacterial (prokaryotic) histone like domain
APZ20_16365	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
APZ20_16380	SM00382	ATPases associated with a variety of cellular activities
APZ20_16420	SM01126	APZ20_16420
APZ20_16485	SM00342	helix_turn_helix, arabinose operon control protein
APZ20_16490	SM00862	Transcriptional regulatory protein, C terminal
APZ20_16530	SM00382	ATPases associated with a variety of cellular activities
APZ20_16620	SM00855	Phosphoglycerate mutase family
APZ20_16690	SM00382	ATPases associated with a variety of cellular activities
APZ20_16690	SM01086	C-terminal, D2-small domain, of ClpB protein
APZ20_16730	SM00363	S4 RNA-binding domain
APZ20_16775	SM00382	ATPases associated with a variety of cellular activities
APZ20_16775	SM00962	SRP54-type protein, GTPase domain
APZ20_16775	SM00963	SRP54-type protein, helical bundle domain
APZ20_16780	SM01126	APZ20_16780
APZ20_16795	SM00813	Alpha-L-arabinofuranosidase C-terminus
APZ20_16810	SM01126	APZ20_16810
APZ20_16930	SM00116	Domain in cystathionine beta-synthase and other proteins.
APZ20_16950	SM00382	ATPases associated with a variety of cellular activities
APZ20_16995	SM00924	MgtE intracellular N domain
APZ20_17030	SM00421	helix_turn_helix, Lux Regulon
APZ20_17055	SM00849	Metallo-beta-lactamase superfamily
APZ20_17065	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
APZ20_17090	SM00422	helix_turn_helix, mercury resistance
APZ20_17390	SM00448	cheY-homologous receiver domain
APZ20_17390	SM00862	Transcriptional regulatory protein, C terminal
APZ20_17395	SM00387	Histidine kinase-like ATPases
APZ20_17395	SM00388	His Kinase A (phosphoacceptor) domain
APZ20_17400	SM01126	APZ20_17400
APZ20_17415	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
APZ20_17460	SM00849	Metallo-beta-lactamase superfamily
APZ20_17475	SM00382	ATPases associated with a variety of cellular activities
APZ20_17495	SM00387	Histidine kinase-like ATPases
APZ20_17495	SM00388	His Kinase A (phosphoacceptor) domain
APZ20_17500	SM00448	cheY-homologous receiver domain
APZ20_17500	SM00862	Transcriptional regulatory protein, C terminal
APZ20_17560	SM00861	Transketolase, pyrimidine binding domain
APZ20_17580	SM00028	Tetratricopeptide repeats
APZ20_17580	SM00327	von Willebrand factor (vWF) type A domain
APZ20_17585	SM00327	von Willebrand factor (vWF) type A domain
APZ20_17600	SM00382	ATPases associated with a variety of cellular activities
APZ20_17625	SM00965	Secretin and TonB N terminus short domain
APZ20_17680	SM00487	DEAD-like helicases superfamily
APZ20_17680	SM00490	helicase superfamily c-terminal domain
APZ20_17690	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
APZ20_17690	SM00954	Region found in RelA / SpoT proteins
APZ20_17695	SM01409	APZ20_17695
APZ20_17705	SM00072	Guanylate kinase homologues.
APZ20_17730	SM00729	Elongator protein 3, MiaB family, Radical SAM
APZ20_17755	SM01011	Aminopeptidase P, N-terminal domain
APZ20_17840	SM00919	Malic enzyme, NAD binding domain
APZ20_17840	SM01274	APZ20_17840
APZ20_17855	SM00387	Histidine kinase-like ATPases
APZ20_17855	SM00388	His Kinase A (phosphoacceptor) domain
APZ20_17855	SM00448	cheY-homologous receiver domain
APZ20_17885	SM00421	helix_turn_helix, Lux Regulon
APZ20_17885	SM00448	cheY-homologous receiver domain
APZ20_17895	SM00387	Histidine kinase-like ATPases
APZ20_17895	SM00388	His Kinase A (phosphoacceptor) domain
APZ20_17900	SM00448	cheY-homologous receiver domain
APZ20_17900	SM00862	Transcriptional regulatory protein, C terminal
APZ20_17915	SM00822	APZ20_17915
APZ20_17920	SM00354	helix_turn _helix lactose operon repressor
APZ20_17935	SM00642	Alpha-amylase domain
APZ20_17945	SM01154	APZ20_17945
APZ20_17975	SM00450	Rhodanese Homology Domain
APZ20_18025	SM00382	ATPases associated with a variety of cellular activities
APZ20_18035	SM00460	Transglutaminase/protease-like homologues
APZ20_18050	SM00493	APZ20_18050
APZ20_18060	SM00382	ATPases associated with a variety of cellular activities
APZ20_18090	SM00729	Elongator protein 3, MiaB family, Radical SAM
APZ20_18095	SM00849	Metallo-beta-lactamase superfamily
APZ20_18120	SM01126	APZ20_18120
APZ20_18185	SM00331	Sigma factor PP2C-like phosphatases
APZ20_18185	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
APZ20_18190	SM00479	APZ20_18190
APZ20_18205	SM00849	Metallo-beta-lactamase superfamily
APZ20_18210	SM00257	Lysin motif
APZ20_18235	SM00411	bacterial (prokaryotic) histone like domain
APZ20_18240	SM00382	ATPases associated with a variety of cellular activities
APZ20_18240	SM00464	Found in ATP-dependent protease La (LON)
APZ20_18245	SM00382	ATPases associated with a variety of cellular activities
APZ20_18245	SM00994	ClpX C4-type zinc finger
APZ20_18245	SM01086	C-terminal, D2-small domain, of ClpB protein
APZ20_18310	SM01329	APZ20_18310
APZ20_18315	SM01126	APZ20_18315
APZ20_18345	SM00448	cheY-homologous receiver domain
APZ20_18345	SM00862	Transcriptional regulatory protein, C terminal
APZ20_18350	SM00387	Histidine kinase-like ATPases
APZ20_18350	SM00388	His Kinase A (phosphoacceptor) domain
APZ20_18370	SM00014	Acid phosphatase homologues
APZ20_18410	SM00855	Phosphoglycerate mutase family
APZ20_18430	SM00829	Enoylreductase
APZ20_18440	SM00382	ATPases associated with a variety of cellular activities
APZ20_18485	SM00829	Enoylreductase
APZ20_18545	SM01126	APZ20_18545
APZ20_18595	SM00838	Elongation factor G C-terminus
APZ20_18720	SM01126	APZ20_18720
APZ20_18765	SM00464	Found in ATP-dependent protease La (LON)
APZ20_18785	SM01126	APZ20_18785
APZ20_18795	SM01126	APZ20_18795
APZ20_18830	SM00342	helix_turn_helix, arabinose operon control protein
APZ20_18865	SM00917	LeuA allosteric (dimerisation) domain
APZ20_18870	SM01329	APZ20_18870
APZ20_18905	SM01126	APZ20_18905
APZ20_18980	SM00788	Adenylosuccinate synthetase
APZ20_18990	SM00244	prohibitin homologues
APZ20_18995	SM00244	prohibitin homologues
APZ20_19000	SM00448	cheY-homologous receiver domain
APZ20_19005	SM00271	DnaJ molecular chaperone homology domain
APZ20_19080	SM00382	ATPases associated with a variety of cellular activities
APZ20_19115	SM00825	Beta-ketoacyl synthase
APZ20_19125	SM00822	APZ20_19125
APZ20_19130	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
APZ20_19160	SM01126	APZ20_19160
APZ20_19165	SM00487	DEAD-like helicases superfamily
APZ20_19230	SM00345	helix_turn_helix gluconate operon transcriptional repressor
APZ20_19230	SM00866	APZ20_19230
APZ20_19295	SM00382	ATPases associated with a variety of cellular activities
APZ20_19310	SM01211	APZ20_19310
APZ20_19395	SM00656	APZ20_19395
APZ20_19455	SM00528	Domain in histone-like proteins of HNS family
APZ20_19470	SM00382	ATPases associated with a variety of cellular activities
APZ20_19500	SM00882	Coenzyme A transferase
APZ20_19505	SM00882	Coenzyme A transferase
APZ20_19540	SM00893	Electron transfer flavoprotein domain
APZ20_19545	SM00893	Electron transfer flavoprotein domain
APZ20_19555	SM00382	ATPases associated with a variety of cellular activities
APZ20_19610	SM00116	Domain in cystathionine beta-synthase and other proteins.
APZ20_19645	SM00487	DEAD-like helicases superfamily
APZ20_19645	SM00490	helicase superfamily c-terminal domain
APZ20_19670	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
APZ20_19695	SM00825	Beta-ketoacyl synthase
APZ20_19785	SM01126	APZ20_19785
APZ20_19810	SM00830	Chorismate mutase type II
APZ20_19820	SM00382	ATPases associated with a variety of cellular activities
APZ20_19890	SM00986	Uracil DNA glycosylase superfamily
APZ20_19890	SM00987	UreE urease accessory protein, C-terminal domain 
APZ20_19915	SM00382	ATPases associated with a variety of cellular activities
APZ20_19915	SM00930	APZ20_19915
APZ20_19985	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
APZ20_19985	SM00091	PAS domain
APZ20_19985	SM00387	Histidine kinase-like ATPases
APZ20_19985	SM00388	His Kinase A (phosphoacceptor) domain
APZ20_19985	SM00448	cheY-homologous receiver domain
APZ20_20005	SM01005	Alanine racemase, C-terminal domain
APZ20_20015	SM00344	helix_turn_helix ASNC type
APZ20_20055	SM00448	cheY-homologous receiver domain
APZ20_20055	SM00862	Transcriptional regulatory protein, C terminal
APZ20_20060	SM00387	Histidine kinase-like ATPases
APZ20_20060	SM00388	His Kinase A (phosphoacceptor) domain
APZ20_20095	SM00382	ATPases associated with a variety of cellular activities
APZ20_20115	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
APZ20_20120	SM00986	Uracil DNA glycosylase superfamily
APZ20_20120	SM00987	UreE urease accessory protein, C-terminal domain 
APZ20_20185	SM00850	LytTr DNA-binding domain
APZ20_20190	SM00448	cheY-homologous receiver domain
APZ20_20195	SM00387	Histidine kinase-like ATPases
APZ20_20245	SM00138	Methyltransferase, chemotaxis proteins 
APZ20_20250	SM00448	cheY-homologous receiver domain
APZ20_20260	SM00382	ATPases associated with a variety of cellular activities
APZ20_20260	SM00448	cheY-homologous receiver domain
APZ20_20390	SM01126	APZ20_20390
APZ20_20445	SM00100	Cyclic nucleotide-monophosphate binding domain
APZ20_20445	SM00419	helix_turn_helix, cAMP Regulatory protein
APZ20_20465	SM00903	Flavin reductase like domain
APZ20_20700	SM00257	Lysin motif
APZ20_20725	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
APZ20_20725	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
APZ20_20725	SM00493	APZ20_20725
APZ20_20780	SM00487	DEAD-like helicases superfamily
APZ20_20780	SM00490	helicase superfamily c-terminal domain
APZ20_20795	SM01126	APZ20_20795
APZ20_20830	SM00878	Biotin carboxylase C-terminal domain
APZ20_20855	SM00530	Helix-turn-helix XRE-family like proteins 
APZ20_20870	SM01126	APZ20_20870
APZ20_20900	SM00912	haemagglutination activity domain
APZ20_20920	SM01126	APZ20_20920
APZ20_20950	SM00798	AICARFT/IMPCHase bienzyme
APZ20_20950	SM00851	MGS-like domain
APZ20_20960	SM01209	APZ20_20960
APZ20_20960	SM01210	APZ20_20960
APZ20_20990	SM00563	Phosphate acyltransferases
APZ20_21050	SM00052	Putative diguanylate phosphodiesterase
APZ20_21050	SM00267	diguanylate cyclase
APZ20_21050	SM00448	cheY-homologous receiver domain
APZ20_21055	SM00073	Histidine Phosphotransfer domain
APZ20_21055	SM00387	Histidine kinase-like ATPases
APZ20_21055	SM00388	His Kinase A (phosphoacceptor) domain
APZ20_21055	SM00448	cheY-homologous receiver domain
APZ20_21140	SM00470	ParB-like nuclease domain
APZ20_21160	SM01259	APZ20_21160
APZ20_21190	SM00836	DALR anticodon binding domain
APZ20_21190	SM01016	Arginyl tRNA synthetase N terminal dom
APZ20_21215	SM00090	RIO-like kinase
APZ20_21240	SM00998	Adenylosuccinate lyase C-terminus
APZ20_21305	SM00881	CoA binding domain
APZ20_21315	SM00116	Domain in cystathionine beta-synthase and other proteins.
APZ20_21315	SM00924	MgtE intracellular N domain
APZ20_21340	SM00226	Low molecular weight phosphatase family
APZ20_21345	SM00248	ankyrin repeats
APZ20_21355	SM00825	Beta-ketoacyl synthase
APZ20_21380	SM00822	APZ20_21380
APZ20_21395	SM00729	Elongator protein 3, MiaB family, Radical SAM
APZ20_21395	SM00876	Biotin and Thiamin Synthesis associated domain
APZ20_21440	SM01060	APZ20_21440
APZ20_21485	SM00849	Metallo-beta-lactamase superfamily
APZ20_21575	SM00387	Histidine kinase-like ATPases
APZ20_21575	SM00388	His Kinase A (phosphoacceptor) domain
APZ20_21580	SM00448	cheY-homologous receiver domain
APZ20_21580	SM00862	Transcriptional regulatory protein, C terminal
APZ20_21605	SM00248	ankyrin repeats
APZ20_21610	SM01060	APZ20_21610
APZ20_21625	SM01126	APZ20_21625
APZ20_21645	SM00491	APZ20_21645
APZ20_21670	SM00477	DNA/RNA non-specific endonuclease
APZ20_21670	SM00892	DNA/RNA non-specific endonuclease
APZ20_21685	SM01004	Delta-aminolevulinic acid dehydratase
APZ20_21725	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
APZ20_21745	SM00382	ATPases associated with a variety of cellular activities
APZ20_21755	SM00530	Helix-turn-helix XRE-family like proteins 
APZ20_21780	SM00382	ATPases associated with a variety of cellular activities
APZ20_21820	SM01126	APZ20_21820
APZ20_21915	SM00563	Phosphate acyltransferases
APZ20_21940	SM01126	APZ20_21940
APZ20_21960	SM00346	helix_turn_helix isocitrate lyase regulation
APZ20_21980	SM00091	PAS domain
APZ20_21980	SM00387	Histidine kinase-like ATPases
APZ20_21980	SM00388	His Kinase A (phosphoacceptor) domain
APZ20_21980	SM00448	cheY-homologous receiver domain
APZ20_22010	SM00564	beta-propeller repeat
APZ20_22065	SM01126	APZ20_22065
APZ20_22100	SM01126	APZ20_22100
APZ20_22115	SM00382	ATPases associated with a variety of cellular activities
APZ20_22165	SM01126	APZ20_22165
APZ20_22170	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
APZ20_22170	SM01232	APZ20_22170
APZ20_22225	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
APZ20_22225	SM00091	PAS domain
APZ20_22275	SM00829	Enoylreductase
APZ20_22340	SM00344	helix_turn_helix ASNC type
APZ20_22390	SM00829	Enoylreductase
APZ20_22420	SM00487	DEAD-like helicases superfamily
APZ20_22420	SM00490	helicase superfamily c-terminal domain
APZ20_22420	SM00847	Helicase associated domain (HA2)  Add an annotation
APZ20_22430	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
APZ20_22480	SM00421	helix_turn_helix, Lux Regulon
APZ20_22480	SM00448	cheY-homologous receiver domain
APZ20_22585	SM00155	Phospholipase D. Active site motifs.
APZ20_22610	SM01126	APZ20_22610
APZ20_22650	SM00729	Elongator protein 3, MiaB family, Radical SAM
APZ20_22680	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
APZ20_22680	SM00245	tail specific protease
APZ20_22875	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
APZ20_22900	SM00014	Acid phosphatase homologues
APZ20_22910	SM00028	Tetratricopeptide repeats
