locus-tag class description PXO_00004 PF04717 Type VI secretion system, phage-baseplate injector PXO_00006 PF03626 Prokaryotic Cytochrome C oxidase subunit IV PXO_00007 PF00510 Cytochrome c oxidase subunit III PXO_00008 PF00115 Cytochrome C and Quinol oxidase polypeptide I PXO_00009 PF00116 Cytochrome C oxidase subunit II, periplasmic domain PXO_00009 PF06481 COX Aromatic Rich Motif PXO_00012 PF01687 Riboflavin kinase PXO_00012 PF06574 FAD synthetase PXO_00013 PF03023 Lipid II flippase MurJ PXO_00014 PF01649 Ribosomal protein S20 PXO_00015 PF01926 50S ribosome-binding GTPase PXO_00015 PF01018 GTP1/OBG PXO_00020 PF07715 TonB-dependent Receptor Plug Domain PXO_00020 PF00593 TonB dependent receptor PXO_00022 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PXO_00022 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PXO_00026 PF01618 MotA/TolQ/ExbB proton channel family PXO_00027 PF00691 OmpA family PXO_00027 PF13677 Membrane MotB of proton-channel complex MotA/MotB PXO_00028 PF13614 AAA domain PXO_00029 PF01584 CheW-like domain PXO_00031 PF00072 Response regulator receiver domain PXO_00032 PF01627 Hpt domain PXO_00032 PF09078 CheY binding PXO_00032 PF02895 Signal transducing histidine kinase, homodimeric domain PXO_00032 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_00032 PF01584 CheW-like domain PXO_00036 PF02203 Tar ligand binding domain homologue PXO_00036 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PXO_00036 PF00672 HAMP domain PXO_00039 PF00672 HAMP domain PXO_00039 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PXO_00039 PF02203 Tar ligand binding domain homologue PXO_00041 PF00672 HAMP domain PXO_00041 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PXO_00041 PF02203 Tar ligand binding domain homologue PXO_00043 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PXO_00043 PF00672 HAMP domain PXO_00043 PF02203 Tar ligand binding domain homologue PXO_00045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PXO_00045 PF00672 HAMP domain PXO_00045 PF02203 Tar ligand binding domain homologue PXO_00046 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PXO_00046 PF02203 Tar ligand binding domain homologue PXO_00046 PF00672 HAMP domain PXO_00047 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PXO_00047 PF02203 Tar ligand binding domain homologue PXO_00047 PF00672 HAMP domain PXO_00049 PF07238 PilZ domain PXO_00049 PF07317 Flagellar regulator YcgR PXO_00050 PF01584 CheW-like domain PXO_00054 PF00672 HAMP domain PXO_00054 PF02203 Tar ligand binding domain homologue PXO_00054 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PXO_00055 PF01739 CheR methyltransferase, SAM binding domain PXO_00055 PF03705 CheR methyltransferase, all-alpha domain PXO_00056 PF03975 CheD chemotactic sensory transduction PXO_00057 PF00072 Response regulator receiver domain PXO_00057 PF01339 CheB methylesterase PXO_00058 PF00563 EAL domain PXO_00058 PF00990 Diguanylate cyclase, GGDEF domain PXO_00058 PF03707 Bacterial signalling protein N terminal repeat PXO_00059 PF00561 alpha/beta hydrolase fold PXO_00061 PF00330 Aconitase family (aconitate hydratase) PXO_00061 PF11791 Aconitate B N-terminal domain PXO_00061 PF06434 Aconitate hydratase 2 N-terminus PXO_00064 PF00694 Aconitase C-terminal domain PXO_00064 PF00330 Aconitase family (aconitate hydratase) PXO_00067 PF00501 AMP-binding enzyme PXO_00067 PF13193 AMP-binding enzyme C-terminal domain PXO_00068 PF00378 Enoyl-CoA hydratase/isomerase PXO_00069 PF01627 Hpt domain PXO_00069 PF00512 His Kinase A (phospho-acceptor) domain PXO_00069 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_00069 PF00072 Response regulator receiver domain PXO_00070 PF00072 Response regulator receiver domain PXO_00071 PF01336 OB-fold nucleic acid binding domain PXO_00071 PF00152 tRNA synthetases class II (D, K and N) PXO_00072 PF00472 RF-1 domain PXO_00072 PF03462 PCRF domain PXO_00079 PF01610 Transposase PXO_00079 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 PXO_00079 PF13542 Helix-turn-helix domain of transposase family ISL3 PXO_00083 PF01368 DHH family PXO_00083 PF02272 DHHA1 domain PXO_00083 PF17768 RecJ OB domain PXO_00085 PF03449 Transcription elongation factor, N-terminal PXO_00085 PF01272 Transcription elongation factor, GreA/GreB, C-term PXO_00086 PF02142 MGS-like domain PXO_00086 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain PXO_00086 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PXO_00088 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain PXO_00088 PF00117 Glutamine amidotransferase class-I PXO_00090 PF01113 Dihydrodipicolinate reductase, N-terminus PXO_00090 PF05173 Dihydrodipicolinate reductase, C-terminus PXO_00092 PF03473 MOSC domain PXO_00092 PF03475 3-alpha domain PXO_00093 PF00155 Aminotransferase class I and II PXO_00098 PF02421 Ferrous iron transport protein B PXO_00098 PF07664 Ferrous iron transport protein B C terminus PXO_00098 PF07670 Nucleoside recognition PXO_00100 PF00378 Enoyl-CoA hydratase/isomerase PXO_00102 PF00682 HMGL-like PXO_00103 PF00106 short chain dehydrogenase PXO_00104 PF09285 Elongation factor P, C-terminal PXO_00104 PF01132 Elongation factor P (EF-P) OB domain PXO_00104 PF08207 Elongation factor P (EF-P) KOW-like domain PXO_00112 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PXO_00112 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PXO_00115 PF16338 Domain of unknown function (DUF4968) PXO_00115 PF17137 Domain of unknown function (DUF5110) PXO_00115 PF01055 Glycosyl hydrolases family 31 PXO_00118 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PXO_00118 PF03466 LysR substrate binding domain PXO_00120 PF01081 KDPG and KHG aldolase PXO_00121 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PXO_00121 PF13378 Enolase C-terminal domain-like PXO_00122 PF08450 SMP-30/Gluconolactonase/LRE-like region PXO_00123 PF05035 2-keto-3-deoxy-galactonokinase PXO_00124 PF11953 Domain of unknown function (DUF3470) PXO_00124 PF00037 4Fe-4S binding domain PXO_00126 PF00701 Dihydrodipicolinate synthetase family PXO_00129 PF00578 AhpC/TSA family PXO_00130 PF13638 PIN domain PXO_00130 PF02562 PhoH-like protein PXO_00132 PF08543 Phosphomethylpyrimidine kinase PXO_00136 PF03466 LysR substrate binding domain PXO_00136 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PXO_00137 PF02678 Pirin PXO_00137 PF17954 Quercetinase C-terminal cupin domain PXO_00143 PF00772 DnaB-like helicase N terminal domain PXO_00143 PF03796 DnaB-like helicase C terminal domain PXO_00146 PF02599 Global regulator protein family PXO_00147 PF01411 tRNA synthetases class II (A) PXO_00147 PF02272 DHHA1 domain PXO_00147 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PXO_00148 PF02631 RecX family PXO_00149 PF00154 recA bacterial DNA recombination protein PXO_00150 PF01726 LexA DNA binding domain PXO_00150 PF00717 Peptidase S24-like PXO_00151 PF03109 ABC1 family PXO_00153 PF02464 Competence-damaged protein PXO_00154 PF13167 GTP-binding GTPase N-terminal PXO_00154 PF01926 50S ribosome-binding GTPase PXO_00154 PF16360 GTP-binding GTPase Middle Region PXO_00155 PF17209 Hfq protein PXO_00157 PF00809 Pterin binding enzyme PXO_00158 PF06480 FtsH Extracellular PXO_00158 PF01434 Peptidase family M41 PXO_00158 PF17862 AAA+ lid domain PXO_00158 PF00004 ATPase family associated with various cellular activities (AAA) PXO_00159 PF01728 FtsJ-like methyltransferase PXO_00160 PF01985 CRS1 / YhbY (CRM) domain PXO_00162 PF01476 LysM domain PXO_00162 PF01551 Peptidase family M23 PXO_00163 PF09335 SNARE associated Golgi protein PXO_00165 PF01975 Survival protein SurE PXO_00166 PF01713 Smr domain PXO_00167 PF01142 tRNA pseudouridine synthase D (TruD) PXO_00168 PF02542 YgbB family PXO_00169 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PXO_00170 PF04977 Septum formation initiator PXO_00171 PF00113 Enolase, C-terminal TIM barrel domain PXO_00171 PF03952 Enolase, N-terminal domain PXO_00173 PF00793 DAHP synthetase I family PXO_00174 PF06418 CTP synthase N-terminus PXO_00174 PF00117 Glutamine amidotransferase class-I PXO_00177 PF01751 Toprim domain PXO_00177 PF00986 DNA gyrase B subunit, carboxyl terminus PXO_00177 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_00177 PF00204 DNA gyrase B PXO_00181 PF01384 Phosphate transporter family PXO_00183 PF01595 Cyclin M transmembrane N-terminal domain PXO_00183 PF03471 Transporter associated domain PXO_00183 PF00571 CBS domain PXO_00186 PF00296 Luciferase-like monooxygenase PXO_00188 PF07690 Major Facilitator Superfamily PXO_00189 PF00664 ABC transporter transmembrane region PXO_00189 PF00005 ABC transporter PXO_00190 PF00005 ABC transporter PXO_00194 PF00534 Glycosyl transferases group 1 PXO_00194 PF13579 Glycosyl transferase 4-like domain PXO_00198 PF08241 Methyltransferase domain PXO_00201 PF00535 Glycosyl transferase family 2 PXO_00202 PF01943 Polysaccharide biosynthesis protein PXO_00203 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PXO_00207 PF05523 WxcM-like, C-terminal PXO_00210 PF00034 Cytochrome c PXO_00212 PF04542 Sigma-70 region 2 PXO_00212 PF08281 Sigma-70, region 4 PXO_00214 PF00082 Subtilase family PXO_00215 PF01578 Cytochrome C assembly protein PXO_00216 PF04995 Heme exporter protein D (CcmD) PXO_00217 PF03100 CcmE PXO_00218 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal PXO_00218 PF01578 Cytochrome C assembly protein PXO_00219 PF08534 Redoxin PXO_00220 PF03918 Cytochrome C biogenesis protein PXO_00223 PF03377 TAL effector repeat PXO_00227 PF03377 TAL effector repeat PXO_00228 PF00873 AcrB/AcrD/AcrF family PXO_00230 PF00873 AcrB/AcrD/AcrF family PXO_00231 PF00529 HlyD membrane-fusion protein of T1SS PXO_00231 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PXO_00237 PF01527 Transposase PXO_00238 PF00872 Transposase, Mutator family PXO_00239 PF13276 HTH-like domain PXO_00240 PF01526 Tn3 transposase DDE domain PXO_00240 PF13700 Domain of unknown function (DUF4158) PXO_00241 PF00486 Transcriptional regulatory protein, C terminal PXO_00241 PF00072 Response regulator receiver domain PXO_00242 PF00034 Cytochrome c PXO_00242 PF03150 Di-haem cytochrome c peroxidase PXO_00243 PF00512 His Kinase A (phospho-acceptor) domain PXO_00243 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_00244 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PXO_00244 PF03466 LysR substrate binding domain PXO_00247 PF00069 Protein kinase domain PXO_00256 PF04717 Type VI secretion system, phage-baseplate injector PXO_00256 PF16671 Actin cross-linking domain PXO_00258 PF05598 Transposase domain (DUF772) PXO_00258 PF01609 Transposase DDE domain PXO_00259 PF00004 ATPase family associated with various cellular activities (AAA) PXO_00259 PF07724 AAA domain (Cdc48 subfamily) PXO_00259 PF17871 AAA lid domain PXO_00259 PF10431 C-terminal, D2-small domain, of ClpB protein PXO_00264 PF05638 Type VI secretion system effector, Hcp PXO_00267 PF01609 Transposase DDE domain PXO_00267 PF05598 Transposase domain (DUF772) PXO_00270 PF16671 Actin cross-linking domain PXO_00270 PF04717 Type VI secretion system, phage-baseplate injector PXO_00278 PF01609 Transposase DDE domain PXO_00278 PF05598 Transposase domain (DUF772) PXO_00281 PF13276 HTH-like domain PXO_00281 PF13683 Integrase core domain PXO_00284 PF05598 Transposase domain (DUF772) PXO_00284 PF01609 Transposase DDE domain PXO_00285 PF05593 RHS Repeat PXO_00285 PF14220 Domain of unknown function (DUF4329) PXO_00285 PF03527 RHS protein PXO_00285 PF03527 RHS protein PXO_00285 PF05593 RHS Repeat PXO_00285 PF14220 Domain of unknown function (DUF4329) PXO_00290 PF00872 Transposase, Mutator family PXO_00309 PF00037 4Fe-4S binding domain PXO_00311 PF01467 Cytidylyltransferase-like PXO_00313 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_00313 PF00183 Hsp90 protein PXO_00318 PF03377 TAL effector repeat PXO_00322 PF00873 AcrB/AcrD/AcrF family PXO_00323 PF00873 AcrB/AcrD/AcrF family PXO_00327 PF00034 Cytochrome c PXO_00333 PF00664 ABC transporter transmembrane region PXO_00333 PF00005 ABC transporter PXO_00334 PF00005 ABC transporter PXO_00334 PF00664 ABC transporter transmembrane region PXO_00335 PF01654 Cytochrome bd terminal oxidase subunit I PXO_00336 PF01654 Cytochrome bd terminal oxidase subunit I PXO_00337 PF02322 Cytochrome bd terminal oxidase subunit II PXO_00338 PF02129 X-Pro dipeptidyl-peptidase (S15 family) PXO_00338 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain PXO_00342 PF00171 Aldehyde dehydrogenase family PXO_00343 PF00696 Amino acid kinase family PXO_00343 PF01472 PUA domain PXO_00346 PF00206 Lyase PXO_00347 PF01118 Semialdehyde dehydrogenase, NAD binding domain PXO_00349 PF00696 Amino acid kinase family PXO_00349 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase PXO_00350 PF01546 Peptidase family M20/M25/M40 PXO_00350 PF07687 Peptidase dimerisation domain PXO_00352 PF00764 Arginosuccinate synthase PXO_00353 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PXO_00353 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PXO_00355 PF01406 tRNA synthetases class I (C) catalytic domain PXO_00355 PF09190 DALR domain PXO_00356 PF02657 Fe-S metabolism associated domain PXO_00359 PF01258 Prokaryotic dksA/traR C4-type zinc finger PXO_00361 PF01979 Amidohydrolase family PXO_00362 PF01551 Peptidase family M23 PXO_00362 PF08460 Bacterial SH3 domain PXO_00363 PF05985 Ethanolamine ammonia-lyase light chain (EutC) PXO_00368 PF05598 Transposase domain (DUF772) PXO_00368 PF01609 Transposase DDE domain PXO_00373 PF01095 Pectinesterase PXO_00376 PF00295 Glycosyl hydrolases family 28 PXO_00378 PF13419 Haloacid dehalogenase-like hydrolase PXO_00380 PF01979 Amidohydrolase family PXO_00382 PF08207 Elongation factor P (EF-P) KOW-like domain PXO_00382 PF01132 Elongation factor P (EF-P) OB domain PXO_00382 PF09285 Elongation factor P, C-terminal PXO_00383 PF04055 Radical SAM superfamily PXO_00384 PF13188 PAS domain PXO_00384 PF00563 EAL domain PXO_00384 PF00990 Diguanylate cyclase, GGDEF domain PXO_00384 PF03707 Bacterial signalling protein N terminal repeat PXO_00387 PF00588 SpoU rRNA Methylase family PXO_00388 PF00459 Inositol monophosphatase family PXO_00389 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PXO_00389 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PXO_00390 PF00545 ribonuclease PXO_00394 PF00270 DEAD/DEAH box helicase PXO_00394 PF03880 DbpA RNA binding domain PXO_00394 PF00271 Helicase conserved C-terminal domain PXO_00395 PF00156 Phosphoribosyl transferase domain PXO_00396 PF02696 Uncharacterized ACR, YdiU/UPF0061 family PXO_00398 PF14497 Glutathione S-transferase, C-terminal domain PXO_00398 PF02798 Glutathione S-transferase, N-terminal domain PXO_00399 PF00313 'Cold-shock' DNA-binding domain PXO_00400 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 PXO_00401 PF07152 YaeQ protein PXO_00403 PF00990 Diguanylate cyclase, GGDEF domain PXO_00403 PF00072 Response regulator receiver domain PXO_00403 PF00563 EAL domain PXO_00404 PF01435 Peptidase family M48 PXO_00405 PF00749 tRNA synthetases class I (E and Q), catalytic domain PXO_00406 PF00106 short chain dehydrogenase PXO_00407 PF07879 PHB/PHA accumulation regulator DNA-binding domain PXO_00407 PF05233 PHB accumulation regulatory domain PXO_00410 PF08676 MutL C terminal dimerisation domain PXO_00410 PF01119 DNA mismatch repair protein, C-terminal domain PXO_00411 PF01520 N-acetylmuramoyl-L-alanine amidase PXO_00411 PF11741 AMIN domain PXO_00412 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE PXO_00413 PF01256 Carbohydrate kinase PXO_00413 PF03853 YjeF-related protein N-terminus PXO_00414 PF08331 Domain of unknown function (DUF1730) PXO_00415 PF02601 Exonuclease VII, large subunit PXO_00415 PF13742 OB-fold nucleic acid binding domain PXO_00418 PF03781 Sulfatase-modifying factor enzyme 1 PXO_00420 PF01612 3'-5' exonuclease PXO_00420 PF00570 HRDC domain PXO_00421 PF13298 DNA polymerase Ligase (LigD) PXO_00421 PF01068 ATP dependent DNA ligase domain PXO_00421 PF04679 ATP dependent DNA ligase C terminal region PXO_00428 PF00872 Transposase, Mutator family PXO_00437 PF04386 Stringent starvation protein B PXO_00438 PF02798 Glutathione S-transferase, N-terminal domain PXO_00438 PF00043 Glutathione S-transferase, C-terminal domain PXO_00439 PF02167 Cytochrome C1 family PXO_00440 PF00033 Cytochrome b/b6/petB PXO_00440 PF00032 Cytochrome b(C-terminal)/b6/petD PXO_00441 PF00355 Rieske [2Fe-2S] domain PXO_00441 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal PXO_00442 PF01464 Transglycosylase SLT domain PXO_00446 PF04055 Radical SAM superfamily PXO_00446 PF00919 Uncharacterized protein family UPF0004 PXO_00446 PF01938 TRAM domain PXO_00447 PF02562 PhoH-like protein PXO_00449 PF02130 Uncharacterized protein family UPF0054 PXO_00451 PF00571 CBS domain PXO_00451 PF03471 Transporter associated domain PXO_00454 PF00171 Aldehyde dehydrogenase family PXO_00456 PF00528 Binding-protein-dependent transport system inner membrane component PXO_00457 PF00528 Binding-protein-dependent transport system inner membrane component PXO_00458 PF08402 TOBE domain PXO_00458 PF00005 ABC transporter PXO_00459 PF02321 Outer membrane efflux protein PXO_00460 PF07690 Major Facilitator Superfamily PXO_00461 PF13533 Biotin-lipoyl like PXO_00463 PF00120 Glutamine synthetase, catalytic domain PXO_00464 PF00120 Glutamine synthetase, catalytic domain PXO_00465 PF01266 FAD dependent oxidoreductase PXO_00466 PF00072 Response regulator receiver domain PXO_00466 PF00990 Diguanylate cyclase, GGDEF domain PXO_00467 PF00083 Sugar (and other) transporter PXO_00467 PF07690 Major Facilitator Superfamily PXO_00468 PF00384 Molybdopterin oxidoreductase PXO_00469 PF02634 FdhD/NarQ family PXO_00470 PF07690 Major Facilitator Superfamily PXO_00471 PF00202 Aminotransferase class-III PXO_00472 PF00005 ABC transporter PXO_00474 PF04286 Protein of unknown function (DUF445) PXO_00475 PF00072 Response regulator receiver domain PXO_00475 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PXO_00475 PF00512 His Kinase A (phospho-acceptor) domain PXO_00475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_00475 PF00672 HAMP domain PXO_00475 PF01627 Hpt domain PXO_00476 PF00072 Response regulator receiver domain PXO_00477 PF05598 Transposase domain (DUF772) PXO_00477 PF01609 Transposase DDE domain PXO_00479 PF05088 Bacterial NAD-glutamate dehydrogenase PXO_00481 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PXO_00481 PF00529 HlyD membrane-fusion protein of T1SS PXO_00482 PF00873 AcrB/AcrD/AcrF family PXO_00483 PF13006 Insertion element 4 transposase N-terminal PXO_00483 PF01609 Transposase DDE domain PXO_00486 PF00356 Bacterial regulatory proteins, lacI family PXO_00487 PF05524 PEP-utilising enzyme, N-terminal PXO_00487 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PXO_00487 PF00391 PEP-utilising enzyme, mobile domain PXO_00487 PF00381 PTS HPr component phosphorylation site PXO_00487 PF02896 PEP-utilising enzyme, TIM barrel domain PXO_00488 PF00294 pfkB family carbohydrate kinase PXO_00489 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PXO_00491 PF05598 Transposase domain (DUF772) PXO_00491 PF01609 Transposase DDE domain PXO_00502 PF16671 Actin cross-linking domain PXO_00502 PF04717 Type VI secretion system, phage-baseplate injector PXO_00503 PF01527 Transposase PXO_00504 PF13276 HTH-like domain PXO_00504 PF13333 Integrase core domain PXO_00504 PF00665 Integrase core domain PXO_00505 PF03377 TAL effector repeat PXO_00509 PF01527 Transposase PXO_00510 PF00665 Integrase core domain PXO_00510 PF13276 HTH-like domain PXO_00510 PF13333 Integrase core domain PXO_00511 PF03377 TAL effector repeat PXO_00515 PF00872 Transposase, Mutator family PXO_00519 PF05598 Transposase domain (DUF772) PXO_00519 PF01609 Transposase DDE domain PXO_00520 PF13495 Phage integrase, N-terminal SAM-like domain PXO_00520 PF00589 Phage integrase family PXO_00521 PF07549 SecD/SecF GG Motif PXO_00521 PF02355 Protein export membrane protein PXO_00522 PF07549 SecD/SecF GG Motif PXO_00522 PF13721 SecD export protein N-terminal TM region PXO_00522 PF02355 Protein export membrane protein PXO_00524 PF02699 Preprotein translocase subunit PXO_00525 PF01702 Queuine tRNA-ribosyltransferase PXO_00526 PF02547 Queuosine biosynthesis protein PXO_00535 PF00005 ABC transporter PXO_00536 PF01895 PhoU domain PXO_00538 PF00929 Exonuclease PXO_00541 PF00528 Binding-protein-dependent transport system inner membrane component PXO_00542 PF00528 Binding-protein-dependent transport system inner membrane component PXO_00546 PF03377 TAL effector repeat PXO_00567 PF03377 TAL effector repeat PXO_00572 PF03377 TAL effector repeat PXO_00574 PF13276 HTH-like domain PXO_00574 PF00665 Integrase core domain PXO_00574 PF13333 Integrase core domain PXO_00578 PF00872 Transposase, Mutator family PXO_00580 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PXO_00581 PF01066 CDP-alcohol phosphatidyltransferase PXO_00582 PF08459 UvrC Helix-hairpin-helix N-terminal PXO_00582 PF02151 UvrB/uvrC motif PXO_00582 PF01541 GIY-YIG catalytic domain PXO_00584 PF01451 Low molecular weight phosphotyrosine protein phosphatase PXO_00585 PF02348 Cytidylyltransferase PXO_00587 PF02606 Tetraacyldisaccharide-1-P 4'-kinase PXO_00588 PF00005 ABC transporter PXO_00588 PF00664 ABC transporter transmembrane region PXO_00590 PF01618 MotA/TolQ/ExbB proton channel family PXO_00591 PF00753 Metallo-beta-lactamase superfamily PXO_00591 PF03772 Competence protein PXO_00596 PF00005 ABC transporter PXO_00597 PF02687 FtsX-like permease family PXO_00597 PF12704 MacB-like periplasmic core domain PXO_00599 PF03937 Flavinator of succinate dehydrogenase PXO_00600 PF13085 2Fe-2S iron-sulfur cluster binding domain PXO_00602 PF02910 Fumarate reductase flavoprotein C-term PXO_00602 PF00890 FAD binding domain PXO_00603 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PXO_00606 PF01571 Aminomethyltransferase folate-binding domain PXO_00607 PF00005 ABC transporter PXO_00607 PF17912 MalK OB fold domain PXO_00608 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain PXO_00608 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain PXO_00609 PF02685 Glucokinase PXO_00610 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase PXO_00611 PF00920 Dehydratase family PXO_00612 PF01081 KDPG and KHG aldolase PXO_00613 PF05598 Transposase domain (DUF772) PXO_00620 PF00072 Response regulator receiver domain PXO_00620 PF01627 Hpt domain PXO_00620 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PXO_00620 PF00672 HAMP domain PXO_00620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_00620 PF00512 His Kinase A (phospho-acceptor) domain PXO_00623 PF01526 Tn3 transposase DDE domain PXO_00623 PF13700 Domain of unknown function (DUF4158) PXO_00625 PF02040 Arsenical pump membrane protein PXO_00626 PF03358 NADPH-dependent FMN reductase PXO_00627 PF03960 ArsC family PXO_00628 PF01451 Low molecular weight phosphotyrosine protein phosphatase PXO_00630 PF13175 AAA ATPase domain PXO_00636 PF06480 FtsH Extracellular PXO_00636 PF01434 Peptidase family M41 PXO_00636 PF00004 ATPase family associated with various cellular activities (AAA) PXO_00636 PF17862 AAA+ lid domain PXO_00639 PF05598 Transposase domain (DUF772) PXO_00649 PF00990 Diguanylate cyclase, GGDEF domain PXO_00649 PF08448 PAS fold PXO_00655 PF05683 Fumarase C-terminus PXO_00655 PF05681 Fumarate hydratase (Fumerase) PXO_00656 PF00005 ABC transporter PXO_00657 PF00970 Oxidoreductase FAD-binding domain PXO_00657 PF00175 Oxidoreductase NAD-binding domain PXO_00658 PF00255 Glutathione peroxidase PXO_00660 PF01432 Peptidase family M3 PXO_00661 PF01432 Peptidase family M3 PXO_00664 PF00082 Subtilase family PXO_00666 PF08281 Sigma-70, region 4 PXO_00666 PF04542 Sigma-70 region 2 PXO_00668 PF12802 MarR family PXO_00673 PF00854 POT family PXO_00676 PF14310 Fibronectin type III-like domain PXO_00676 PF01915 Glycosyl hydrolase family 3 C-terminal domain PXO_00676 PF00933 Glycosyl hydrolase family 3 N terminal domain PXO_00678 PF00563 EAL domain PXO_00678 PF01590 GAF domain PXO_00678 PF00990 Diguanylate cyclase, GGDEF domain PXO_00678 PF00360 Phytochrome region PXO_00679 PF00474 Sodium:solute symporter family PXO_00680 PF14310 Fibronectin type III-like domain PXO_00680 PF01915 Glycosyl hydrolase family 3 C-terminal domain PXO_00680 PF00933 Glycosyl hydrolase family 3 N terminal domain PXO_00687 PF00342 Phosphoglucose isomerase PXO_00688 PF02261 Aspartate decarboxylase PXO_00689 PF02569 Pantoate-beta-alanine ligase PXO_00690 PF02548 Ketopantoate hydroxymethyltransferase PXO_00691 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) PXO_00695 PF02649 Type I GTP cyclohydrolase folE2 PXO_00696 PF01520 N-acetylmuramoyl-L-alanine amidase PXO_00699 PF01527 Transposase PXO_00700 PF13276 HTH-like domain PXO_00701 PF05598 Transposase domain (DUF772) PXO_00703 PF00082 Subtilase family PXO_00703 PF03797 Autotransporter beta-domain PXO_00705 PF13533 Biotin-lipoyl like PXO_00706 PF00873 AcrB/AcrD/AcrF family PXO_00707 PF02321 Outer membrane efflux protein PXO_00708 PF00512 His Kinase A (phospho-acceptor) domain PXO_00708 PF08448 PAS fold PXO_00708 PF13426 PAS domain PXO_00708 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_00708 PF00072 Response regulator receiver domain PXO_00709 PF00196 Bacterial regulatory proteins, luxR family PXO_00709 PF00072 Response regulator receiver domain PXO_00711 PF12951 Passenger-associated-transport-repeat PXO_00713 PF01527 Transposase PXO_00715 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PXO_00716 PF01842 ACT domain PXO_00716 PF00800 Prephenate dehydratase PXO_00716 PF01817 Chorismate mutase type II PXO_00717 PF00266 Aminotransferase class-V PXO_00718 PF00174 Oxidoreductase molybdopterin binding domain PXO_00724 PF07702 UTRA domain PXO_00724 PF00392 Bacterial regulatory proteins, gntR family PXO_00726 PF07969 Amidohydrolase family PXO_00727 PF00221 Aromatic amino acid lyase PXO_00729 PF17391 Urocanase N-terminal domain PXO_00729 PF17392 Urocanase C-terminal domain PXO_00729 PF01175 Urocanase Rossmann-like domain PXO_00732 PF13276 HTH-like domain PXO_00733 PF01527 Transposase PXO_00734 PF03989 DNA gyrase C-terminal domain, beta-propeller PXO_00734 PF00521 DNA gyrase/topoisomerase IV, subunit A PXO_00735 PF01008 Initiation factor 2 subunit family PXO_00737 PF00152 tRNA synthetases class II (D, K and N) PXO_00738 PF03119 NAD-dependent DNA ligase C4 zinc finger domain PXO_00738 PF03120 NAD-dependent DNA ligase OB-fold domain PXO_00738 PF00533 BRCA1 C Terminus (BRCT) domain PXO_00738 PF12826 Helix-hairpin-helix motif PXO_00738 PF01653 NAD-dependent DNA ligase adenylation domain PXO_00742 PF04354 ZipA, C-terminal FtsZ-binding domain PXO_00743 PF02463 RecF/RecN/SMC N terminal domain PXO_00744 PF03948 Ribosomal protein L9, C-terminal domain PXO_00744 PF01281 Ribosomal protein L9, N-terminal domain PXO_00745 PF01084 Ribosomal protein S18 PXO_00746 PF01250 Ribosomal protein S6 PXO_00747 PF01521 Iron-sulphur cluster biosynthesis PXO_00748 PF00152 tRNA synthetases class II (D, K and N) PXO_00748 PF01336 OB-fold nucleic acid binding domain PXO_00754 PF00484 Carbonic anhydrase PXO_00755 PF06052 3-hydroxyanthranilic acid dioxygenase PXO_00758 PF00266 Aminotransferase class-V PXO_00760 PF01494 FAD binding domain PXO_00762 PF00929 Exonuclease PXO_00762 PF08411 Exonuclease C-terminal PXO_00764 PF00248 Aldo/keto reductase family PXO_00767 PF01513 ATP-NAD kinase PXO_00768 PF02926 THUMP domain PXO_00768 PF10672 S-adenosylmethionine-dependent methyltransferase PXO_00768 PF01170 Putative RNA methylase family UPF0020 PXO_00777 PF00581 Rhodanese-like domain PXO_00778 PF00293 NUDIX domain PXO_00779 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PXO_00779 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PXO_00780 PF00378 Enoyl-CoA hydratase/isomerase PXO_00782 PF10576 Iron-sulfur binding domain of endonuclease III PXO_00782 PF00633 Helix-hairpin-helix motif PXO_00782 PF00730 HhH-GPD superfamily base excision DNA repair protein PXO_00785 PF00484 Carbonic anhydrase PXO_00789 PF12849 PBP superfamily domain PXO_00795 PF16921 Tex protein YqgF-like domain PXO_00795 PF17674 HHH domain PXO_00795 PF09371 Tex-like protein N-terminal domain PXO_00795 PF00575 S1 RNA binding domain PXO_00797 PF00072 Response regulator receiver domain PXO_00800 PF04551 GcpE protein PXO_00801 PF01569 PAP2 superfamily PXO_00802 PF07690 Major Facilitator Superfamily PXO_00804 PF01177 Asp/Glu/Hydantoin racemase PXO_00805 PF00892 EamA-like transporter family PXO_00806 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain PXO_00806 PF01565 FAD binding domain PXO_00808 PF01180 Dihydroorotate dehydrogenase PXO_00811 PF00171 Aldehyde dehydrogenase family PXO_00814 PF03447 Homoserine dehydrogenase, NAD binding domain PXO_00814 PF13840 ACT domain PXO_00814 PF01842 ACT domain PXO_00814 PF00696 Amino acid kinase family PXO_00814 PF00742 Homoserine dehydrogenase PXO_00815 PF00288 GHMP kinases N terminal domain PXO_00815 PF08544 GHMP kinases C terminal PXO_00822 PF00291 Pyridoxal-phosphate dependent enzyme PXO_00822 PF14821 Threonine synthase N terminus PXO_00827 PF13393 Histidyl-tRNA synthetase PXO_00827 PF03129 Anticodon binding domain PXO_00832 PF08029 HisG, C-terminal domain PXO_00832 PF01634 ATP phosphoribosyltransferase PXO_00833 PF00815 Histidinol dehydrogenase PXO_00834 PF00155 Aminotransferase class I and II PXO_00835 PF00475 Imidazoleglycerol-phosphate dehydratase PXO_00836 PF00117 Glutamine amidotransferase class-I PXO_00837 PF00977 Histidine biosynthesis protein PXO_00838 PF00977 Histidine biosynthesis protein PXO_00847 PF03079 ARD/ARD' family PXO_00848 PF00596 Class II Aldolase and Adducin N-terminal domain PXO_00849 PF13520 Amino acid permease PXO_00850 PF13520 Amino acid permease PXO_00852 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PXO_00852 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PXO_00853 PF01565 FAD binding domain PXO_00853 PF02913 FAD linked oxidases, C-terminal domain PXO_00858 PF03918 Cytochrome C biogenesis protein PXO_00859 PF08534 Redoxin PXO_00860 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal PXO_00860 PF01578 Cytochrome C assembly protein PXO_00861 PF03100 CcmE PXO_00863 PF01578 Cytochrome C assembly protein PXO_00864 PF03379 CcmB protein PXO_00865 PF00005 ABC transporter PXO_00866 PF00155 Aminotransferase class I and II PXO_00867 PF00795 Carbon-nitrogen hydrolase PXO_00871 PF00849 RNA pseudouridylate synthase PXO_00871 PF01479 S4 domain PXO_00872 PF04079 Segregation and condensation complex subunit ScpB PXO_00873 PF02616 Segregation and condensation protein ScpA PXO_00874 PF03795 YCII-related domain PXO_00876 PF00356 Bacterial regulatory proteins, lacI family PXO_00877 PF00356 Bacterial regulatory proteins, lacI family PXO_00881 PF00528 Binding-protein-dependent transport system inner membrane component PXO_00882 PF00528 Binding-protein-dependent transport system inner membrane component PXO_00886 PF00795 Carbon-nitrogen hydrolase PXO_00887 PF04371 Porphyromonas-type peptidyl-arginine deiminase PXO_00889 PF00444 Ribosomal protein L36 PXO_00890 PF02224 Cytidylate kinase PXO_00891 PF00575 S1 RNA binding domain PXO_00892 PF00216 Bacterial DNA-binding protein PXO_00894 PF18073 Rubredoxin metal binding domain PXO_00895 PF00953 Glycosyl transferase family 4 PXO_00896 PF02719 Polysaccharide biosynthesis protein PXO_00897 PF00483 Nucleotidyl transferase PXO_00899 PF02254 TrkA-N domain PXO_00899 PF00999 Sodium/hydrogen exchanger family PXO_00902 PF05598 Transposase domain (DUF772) PXO_00904 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PXO_00904 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PXO_00905 PF00571 CBS domain PXO_00905 PF00478 IMP dehydrogenase / GMP reductase domain PXO_00906 PF00958 GMP synthase C terminal domain PXO_00906 PF02540 NAD synthase PXO_00906 PF00117 Glutamine amidotransferase class-I PXO_00907 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) PXO_00908 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus PXO_00908 PF00361 Proton-conducting membrane transporter PXO_00908 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PXO_00909 PF03466 LysR substrate binding domain PXO_00909 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PXO_00911 PF03601 Conserved hypothetical protein 698 PXO_00912 PF03466 LysR substrate binding domain PXO_00912 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PXO_00916 PF00072 Response regulator receiver domain PXO_00917 PF01566 Natural resistance-associated macrophage protein PXO_00918 PF01325 Iron dependent repressor, N-terminal DNA binding domain PXO_00918 PF02742 Iron dependent repressor, metal binding and dimerisation domain PXO_00919 PF14437 MafB19-like deaminase PXO_00920 PF00929 Exonuclease PXO_00921 PF05552 Conserved TM helix PXO_00921 PF00924 Mechanosensitive ion channel PXO_00922 PF00391 PEP-utilising enzyme, mobile domain PXO_00922 PF02896 PEP-utilising enzyme, TIM barrel domain PXO_00922 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PXO_00923 PF03618 Kinase/pyrophosphorylase PXO_00927 PF01066 CDP-alcohol phosphatidyltransferase PXO_00929 PF00561 alpha/beta hydrolase fold PXO_00932 PF00899 ThiF family PXO_00937 PF00665 Integrase core domain PXO_00937 PF13936 Helix-turn-helix domain PXO_00948 PF05593 RHS Repeat PXO_00948 PF03527 RHS protein PXO_00950 PF13936 Helix-turn-helix domain PXO_00950 PF00665 Integrase core domain PXO_00954 PF02895 Signal transducing histidine kinase, homodimeric domain PXO_00954 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_00954 PF01584 CheW-like domain PXO_00954 PF07194 P2 response regulator binding domain PXO_00954 PF01627 Hpt domain PXO_00955 PF04344 Chemotaxis phosphatase, CheZ PXO_00956 PF00072 Response regulator receiver domain PXO_00957 PF04542 Sigma-70 region 2 PXO_00957 PF04539 Sigma-70 region 3 PXO_00957 PF04545 Sigma-70, region 4 PXO_00958 PF10609 NUBPL iron-transfer P-loop NTPase PXO_00959 PF00448 SRP54-type protein, GTPase domain PXO_00961 PF00771 FHIPEP family PXO_00962 PF01312 FlhB HrpN YscU SpaS Family PXO_00964 PF00990 Diguanylate cyclase, GGDEF domain PXO_00964 PF00563 EAL domain PXO_00964 PF03707 Bacterial signalling protein N terminal repeat PXO_00965 PF00990 Diguanylate cyclase, GGDEF domain PXO_00965 PF03707 Bacterial signalling protein N terminal repeat PXO_00965 PF00563 EAL domain PXO_00965 PF13188 PAS domain PXO_00967 PF00563 EAL domain PXO_00967 PF03707 Bacterial signalling protein N terminal repeat PXO_00967 PF13188 PAS domain PXO_00967 PF00990 Diguanylate cyclase, GGDEF domain PXO_00968 PF01311 Bacterial export proteins, family 1 PXO_00969 PF01313 Bacterial export proteins, family 3 PXO_00971 PF00813 FliP family PXO_00972 PF04347 Flagellar biosynthesis protein, FliO PXO_00973 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PXO_00974 PF02154 Flagellar motor switch protein FliM PXO_00974 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PXO_00978 PF18269 T3SS EscN ATPase C-terminal domain PXO_00978 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PXO_00980 PF14842 FliG N-terminal domain PXO_00980 PF14841 FliG middle domain PXO_00980 PF01706 FliG C-terminal domain PXO_00981 PF08345 Flagellar M-ring protein C-terminal PXO_00981 PF01514 Secretory protein of YscJ/FliF family PXO_00982 PF02049 Flagellar hook-basal body complex protein FliE PXO_00983 PF00534 Glycosyl transferases group 1 PXO_00983 PF00535 Glycosyl transferase family 2 PXO_00990 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PXO_00990 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PXO_00992 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PXO_00993 PF02954 Bacterial regulatory protein, Fis family PXO_00993 PF00072 Response regulator receiver domain PXO_00993 PF00158 Sigma-54 interaction domain PXO_00994 PF00072 Response regulator receiver domain PXO_00994 PF01339 CheB methylesterase PXO_00995 PF04963 Sigma-54 factor, core binding domain PXO_00995 PF04552 Sigma-54, DNA binding domain PXO_00995 PF00309 Sigma-54 factor, Activator interacting domain (AID) PXO_00996 PF00196 Bacterial regulatory proteins, luxR family PXO_00996 PF00072 Response regulator receiver domain PXO_00999 PF02561 Flagellar protein FliS PXO_01000 PF07196 Flagellin hook IN motif PXO_01000 PF07195 Flagellar hook-associated protein 2 C-terminus PXO_01000 PF02465 Flagellar hook-associated protein 2 N-terminus PXO_01001 PF00700 Bacterial flagellin C-terminal helical region PXO_01001 PF00669 Bacterial flagellin N-terminal helical region PXO_01003 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PXO_01003 PF07196 Flagellin hook IN motif PXO_01004 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase PXO_01004 PF10135 Rod binding protein PXO_01005 PF02119 Flagellar P-ring protein PXO_01006 PF02107 Flagellar L-ring protein PXO_01007 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PXO_01007 PF00460 Flagella basal body rod protein PXO_01008 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PXO_01008 PF00460 Flagella basal body rod protein PXO_01010 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PXO_01010 PF00460 Flagella basal body rod protein PXO_01010 PF07559 Flagellar basal body protein FlaE PXO_01011 PF03963 Flagellar hook capping protein - N-terminal region PXO_01012 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PXO_01012 PF00460 Flagella basal body rod protein PXO_01013 PF00460 Flagella basal body rod protein PXO_01014 PF01584 CheW-like domain PXO_01014 PF00072 Response regulator receiver domain PXO_01018 PF13188 PAS domain PXO_01018 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_01018 PF00512 His Kinase A (phospho-acceptor) domain PXO_01018 PF00989 PAS fold PXO_01018 PF13426 PAS domain PXO_01019 PF03707 Bacterial signalling protein N terminal repeat PXO_01019 PF00990 Diguanylate cyclase, GGDEF domain PXO_01019 PF00563 EAL domain PXO_01020 PF07730 Histidine kinase PXO_01020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_01021 PF08448 PAS fold PXO_01021 PF00990 Diguanylate cyclase, GGDEF domain PXO_01021 PF08447 PAS fold PXO_01021 PF00563 EAL domain PXO_01024 PF12729 Four helix bundle sensory module for signal transduction PXO_01024 PF00672 HAMP domain PXO_01024 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PXO_01025 PF04356 Protein of unknown function (DUF489) PXO_01027 PF00293 NUDIX domain PXO_01029 PF02617 ATP-dependent Clp protease adaptor protein ClpS PXO_01030 PF00004 ATPase family associated with various cellular activities (AAA) PXO_01030 PF02861 Clp amino terminal domain, pathogenicity island component PXO_01030 PF17871 AAA lid domain PXO_01030 PF10431 C-terminal, D2-small domain, of ClpB protein PXO_01030 PF07724 AAA domain (Cdc48 subfamily) PXO_01031 PF01176 Translation initiation factor 1A / IF-1 PXO_01032 PF03588 Leucyl/phenylalanyl-tRNA protein transferase PXO_01037 PF07992 Pyridine nucleotide-disulphide oxidoreductase PXO_01038 PF09397 Ftsk gamma domain PXO_01038 PF13491 4TM region of DNA translocase FtsK/SpoIIIE PXO_01038 PF01580 FtsK/SpoIIIE family PXO_01038 PF17854 FtsK alpha domain PXO_01040 PF03548 Outer membrane lipoprotein carrier protein LolA PXO_01043 PF12002 MgsA AAA+ ATPase C terminal PXO_01043 PF16193 AAA C-terminal domain PXO_01043 PF00004 ATPase family associated with various cellular activities (AAA) PXO_01045 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PXO_01048 PF00654 Voltage gated chloride channel PXO_01049 PF02803 Thiolase, C-terminal domain PXO_01049 PF00108 Thiolase, N-terminal domain PXO_01050 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PXO_01050 PF00378 Enoyl-CoA hydratase/isomerase PXO_01050 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PXO_01052 PF00334 Nucleoside diphosphate kinase PXO_01053 PF04055 Radical SAM superfamily PXO_01055 PF13464 Domain of unknown function (DUF4115) PXO_01057 PF01011 PQQ enzyme repeat PXO_01057 PF13360 PQQ-like domain PXO_01058 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal PXO_01058 PF01926 50S ribosome-binding GTPase PXO_01059 PF00994 Probable molybdopterin binding domain PXO_01059 PF03454 MoeA C-terminal region (domain IV) PXO_01059 PF03453 MoeA N-terminal region (domain I and II) PXO_01072 PF13683 Integrase core domain PXO_01072 PF13276 HTH-like domain PXO_01073 PF05598 Transposase domain (DUF772) PXO_01074 PF01527 Transposase PXO_01076 PF03544 Gram-negative bacterial TonB protein C-terminal PXO_01077 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PXO_01077 PF02403 Seryl-tRNA synthetase N-terminal domain PXO_01080 PF01609 Transposase DDE domain PXO_01080 PF05598 Transposase domain (DUF772) PXO_01081 PF02525 Flavodoxin-like fold PXO_01082 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PXO_01082 PF03466 LysR substrate binding domain PXO_01085 PF03377 TAL effector repeat PXO_01088 PF00665 Integrase core domain PXO_01088 PF13333 Integrase core domain PXO_01088 PF13276 HTH-like domain PXO_01089 PF13333 Integrase core domain PXO_01089 PF00665 Integrase core domain PXO_01089 PF13276 HTH-like domain PXO_01099 PF00313 'Cold-shock' DNA-binding domain PXO_01100 PF00561 alpha/beta hydrolase fold PXO_01112 PF00588 SpoU rRNA Methylase family PXO_01112 PF08032 RNA 2'-O ribose methyltransferase substrate binding PXO_01115 PF01351 Ribonuclease HII PXO_01116 PF02684 Lipid-A-disaccharide synthetase PXO_01117 PF00132 Bacterial transferase hexapeptide (six repeats) PXO_01117 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 PXO_01118 PF07977 FabA-like domain PXO_01119 PF00132 Bacterial transferase hexapeptide (six repeats) PXO_01119 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD PXO_01121 PF07244 Surface antigen variable number repeat PXO_01121 PF01103 Surface antigen PXO_01122 PF17820 PDZ domain PXO_01122 PF02163 Peptidase family M50 PXO_01125 PF13288 DXP reductoisomerase C-terminal domain PXO_01125 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase PXO_01125 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain PXO_01127 PF01255 Putative undecaprenyl diphosphate synthase PXO_01128 PF01765 Ribosome recycling factor PXO_01129 PF00696 Amino acid kinase family PXO_01131 PF00889 Elongation factor TS PXO_01132 PF00318 Ribosomal protein S2 PXO_01139 PF00557 Metallopeptidase family M24 PXO_01140 PF01909 Nucleotidyltransferase domain PXO_01140 PF01966 HD domain PXO_01140 PF08335 GlnD PII-uridylyltransferase PXO_01141 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal PXO_01141 PF00132 Bacterial transferase hexapeptide (six repeats) PXO_01141 PF14602 Hexapeptide repeat of succinyl-transferase PXO_01143 PF03960 ArsC family PXO_01145 PF01546 Peptidase family M20/M25/M40 PXO_01145 PF07687 Peptidase dimerisation domain PXO_01146 PF00733 Asparagine synthase PXO_01146 PF13537 Glutamine amidotransferase domain PXO_01148 PF07715 TonB-dependent Receptor Plug Domain PXO_01148 PF00593 TonB dependent receptor PXO_01150 PF01804 Penicillin amidase PXO_01151 PF00210 Ferritin-like domain PXO_01152 PF00521 DNA gyrase/topoisomerase IV, subunit A PXO_01152 PF03989 DNA gyrase C-terminal domain, beta-propeller PXO_01153 PF12833 Helix-turn-helix domain PXO_01155 PF02321 Outer membrane efflux protein PXO_01156 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PXO_01156 PF00529 HlyD membrane-fusion protein of T1SS PXO_01157 PF07690 Major Facilitator Superfamily PXO_01161 PF13276 HTH-like domain PXO_01161 PF13683 Integrase core domain PXO_01162 PF01527 Transposase PXO_01165 PF13936 Helix-turn-helix domain PXO_01165 PF00665 Integrase core domain PXO_01171 PF02779 Transketolase, pyrimidine binding domain PXO_01171 PF02780 Transketolase, C-terminal domain PXO_01171 PF13292 1-deoxy-D-xylulose-5-phosphate synthase PXO_01173 PF12806 Acetyl-CoA dehydrogenase C-terminal like PXO_01173 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PXO_01173 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PXO_01173 PF02770 Acyl-CoA dehydrogenase, middle domain PXO_01177 PF01668 SmpB protein PXO_01178 PF03364 Polyketide cyclase / dehydrase and lipid transport PXO_01179 PF03658 RnfH family Ubiquitin PXO_01180 PF04355 SmpA / OmlA family PXO_01181 PF01475 Ferric uptake regulator family PXO_01182 PF02463 RecF/RecN/SMC N terminal domain PXO_01183 PF01628 HrcA protein C terminal domain PXO_01183 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding PXO_01184 PF01025 GrpE PXO_01185 PF00012 Hsp70 protein PXO_01186 PF01556 DnaJ C terminal domain PXO_01186 PF00684 DnaJ central domain PXO_01186 PF00226 DnaJ domain PXO_01187 PF08543 Phosphomethylpyrimidine kinase PXO_01188 PF01817 Chorismate mutase type II PXO_01188 PF02153 Prephenate dehydrogenase PXO_01191 PF03466 LysR substrate binding domain PXO_01191 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PXO_01193 PF00005 ABC transporter PXO_01193 PF00664 ABC transporter transmembrane region PXO_01194 PF01205 Uncharacterized protein family UPF0029 PXO_01195 PF03641 Possible lysine decarboxylase PXO_01196 PF07992 Pyridine nucleotide-disulphide oxidoreductase PXO_01196 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PXO_01197 PF02817 e3 binding domain PXO_01197 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PXO_01197 PF00364 Biotin-requiring enzyme PXO_01198 PF16078 2-oxoglutarate dehydrogenase N-terminus PXO_01198 PF00676 Dehydrogenase E1 component PXO_01198 PF16870 2-oxoglutarate dehydrogenase C-terminal PXO_01198 PF02779 Transketolase, pyrimidine binding domain PXO_01200 PF08007 Cupin superfamily protein PXO_01205 PF00206 Lyase PXO_01205 PF08328 Adenylosuccinate lyase C-terminal PXO_01211 PF00665 Integrase core domain PXO_01211 PF13936 Helix-turn-helix domain PXO_01214 PF00206 Lyase PXO_01214 PF10415 Fumarase C C-terminus PXO_01220 PF00005 ABC transporter PXO_01221 PF00392 Bacterial regulatory proteins, gntR family PXO_01222 PF00255 Glutathione peroxidase PXO_01223 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PXO_01223 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PXO_01224 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PXO_01224 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PXO_01224 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PXO_01225 PF04102 SlyX PXO_01229 PF07690 Major Facilitator Superfamily PXO_01230 PF00294 pfkB family carbohydrate kinase PXO_01232 PF02310 B12 binding domain PXO_01232 PF02607 B12 binding domain PXO_01232 PF02965 Vitamin B12 dependent methionine synthase, activation domain PXO_01232 PF00809 Pterin binding enzyme PXO_01232 PF02574 Homocysteine S-methyltransferase PXO_01233 PF00809 Pterin binding enzyme PXO_01233 PF02574 Homocysteine S-methyltransferase PXO_01234 PF01209 ubiE/COQ5 methyltransferase family PXO_01235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PXO_01235 PF02770 Acyl-CoA dehydrogenase, middle domain PXO_01235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PXO_01238 PF17876 Cold shock domain PXO_01238 PF00575 S1 RNA binding domain PXO_01238 PF00773 RNB domain PXO_01238 PF08206 Ribonuclease B OB domain PXO_01238 PF08461 Ribonuclease R winged-helix domain PXO_01241 PF10609 NUBPL iron-transfer P-loop NTPase PXO_01242 PF00692 dUTPase PXO_01246 PF01738 Dienelactone hydrolase family PXO_01247 PF04055 Radical SAM superfamily PXO_01247 PF00919 Uncharacterized protein family UPF0004 PXO_01247 PF18693 TRAM domain PXO_01248 PF03449 Transcription elongation factor, N-terminal PXO_01248 PF01272 Transcription elongation factor, GreA/GreB, C-term PXO_01253 PF00665 Integrase core domain PXO_01253 PF13936 Helix-turn-helix domain PXO_01254 PF05872 Bacterial protein of unknown function (DUF853) PXO_01257 PF02666 Phosphatidylserine decarboxylase PXO_01258 PF02630 SCO1/SenC PXO_01259 PF05175 Methyltransferase small domain PXO_01260 PF01264 Chorismate synthase PXO_01261 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PXO_01261 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PXO_01262 PF01118 Semialdehyde dehydrogenase, NAD binding domain PXO_01262 PF02774 Semialdehyde dehydrogenase, dimerisation domain PXO_01267 PF01416 tRNA pseudouridine synthase PXO_01268 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase PXO_01269 PF03466 LysR substrate binding domain PXO_01269 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PXO_01270 PF00291 Pyridoxal-phosphate dependent enzyme PXO_01272 PF00290 Tryptophan synthase alpha chain PXO_01273 PF17848 Acetyl-coA carboxylase zinc finger domain PXO_01273 PF01039 Carboxyl transferase domain PXO_01274 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PXO_01274 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PXO_01274 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PXO_01274 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PXO_01278 PF00563 EAL domain PXO_01278 PF00990 Diguanylate cyclase, GGDEF domain PXO_01278 PF03707 Bacterial signalling protein N terminal repeat PXO_01285 PF00121 Triosephosphate isomerase PXO_01287 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 PXO_01288 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit PXO_01289 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit PXO_01290 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit PXO_01292 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit PXO_01292 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region PXO_01292 PF10531 SLBB domain PXO_01293 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal PXO_01293 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PXO_01293 PF00384 Molybdopterin oxidoreductase PXO_01294 PF00146 NADH dehydrogenase PXO_01295 PF12838 4Fe-4S dicluster domain PXO_01296 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 PXO_01297 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PXO_01298 PF00361 Proton-conducting membrane transporter PXO_01298 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PXO_01299 PF00361 Proton-conducting membrane transporter PXO_01299 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus PXO_01300 PF00361 Proton-conducting membrane transporter PXO_01301 PF02576 RimP N-terminal domain PXO_01301 PF17384 RimP C-terminal SH3 domain PXO_01302 PF00575 S1 RNA binding domain PXO_01302 PF13184 NusA-like KH domain PXO_01302 PF08529 NusA N-terminal domain PXO_01303 PF08364 Bacterial translation initiation factor IF-2 associated region PXO_01303 PF11987 Translation-initiation factor 2 PXO_01303 PF00009 Elongation factor Tu GTP binding domain PXO_01303 PF04760 Translation initiation factor IF-2, N-terminal region PXO_01304 PF02033 Ribosome-binding factor A PXO_01305 PF01509 TruB family pseudouridylate synthase (N terminal domain) PXO_01305 PF16198 tRNA pseudouridylate synthase B C-terminal domain PXO_01305 PF09157 Pseudouridine synthase II TruB, C-terminal PXO_01306 PF00312 Ribosomal protein S15 PXO_01307 PF00013 KH domain PXO_01307 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain PXO_01307 PF01138 3' exoribonuclease family, domain 1 PXO_01307 PF03725 3' exoribonuclease family, domain 2 PXO_01307 PF00575 S1 RNA binding domain PXO_01310 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain PXO_01310 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain PXO_01312 PF00731 AIR carboxylase PXO_01313 PF02222 ATP-grasp domain PXO_01313 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain PXO_01314 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PXO_01314 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PXO_01315 PF00462 Glutaredoxin PXO_01317 PF01914 MarC family integral membrane protein PXO_01318 PF00593 TonB dependent receptor PXO_01319 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases PXO_01319 PF03641 Possible lysine decarboxylase PXO_01319 PF11892 Domain of unknown function (DUF3412) PXO_01324 PF05567 Neisseria PilC beta-propeller domain PXO_01355 PF00182 Chitinase class I PXO_01365 PF01555 DNA methylase PXO_01370 PF01609 Transposase DDE domain PXO_01370 PF05598 Transposase domain (DUF772) PXO_01374 PF04851 Type III restriction enzyme, res subunit PXO_01374 PF17757 UvrB interaction domain PXO_01374 PF12344 Ultra-violet resistance protein B PXO_01374 PF02151 UvrB/uvrC motif PXO_01374 PF00271 Helicase conserved C-terminal domain PXO_01379 PF01527 Transposase PXO_01383 PF02824 TGS domain PXO_01383 PF03129 Anticodon binding domain PXO_01383 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PXO_01383 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PXO_01384 PF05198 Translation initiation factor IF-3, N-terminal domain PXO_01384 PF00707 Translation initiation factor IF-3, C-terminal domain PXO_01385 PF01632 Ribosomal protein L35 PXO_01386 PF00453 Ribosomal protein L20 PXO_01387 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain PXO_01387 PF01409 tRNA synthetases class II core domain (F) PXO_01388 PF03484 tRNA synthetase B5 domain PXO_01388 PF01588 Putative tRNA binding domain PXO_01388 PF03483 B3/4 domain PXO_01388 PF03147 Ferredoxin-fold anticodon binding domain PXO_01388 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain PXO_01389 PF00216 Bacterial DNA-binding protein PXO_01390 PF13411 MerR HTH family regulatory protein PXO_01394 PF02397 Bacterial sugar transferase PXO_01398 PF13439 Glycosyltransferase Family 4 PXO_01398 PF00534 Glycosyl transferases group 1 PXO_01400 PF14667 Polysaccharide biosynthesis C-terminal domain PXO_01403 PF03808 Glycosyl transferase WecB/TagA/CpsF family PXO_01423 PF05598 Transposase domain (DUF772) PXO_01426 PF00072 Response regulator receiver domain PXO_01426 PF13426 PAS domain PXO_01426 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_01429 PF04362 Bacterial Fe(2+) trafficking PXO_01430 PF00633 Helix-hairpin-helix motif PXO_01430 PF00730 HhH-GPD superfamily base excision DNA repair protein PXO_01430 PF14815 NUDIX domain PXO_01431 PF02881 SRP54-type protein, helical bundle domain PXO_01431 PF00448 SRP54-type protein, GTPase domain PXO_01435 PF05544 Proline racemase PXO_01436 PF01266 FAD dependent oxidoreductase PXO_01438 PF04324 BFD-like [2Fe-2S] binding domain PXO_01438 PF07992 Pyridine nucleotide-disulphide oxidoreductase PXO_01439 PF00701 Dihydrodipicolinate synthetase family PXO_01440 PF00171 Aldehyde dehydrogenase family PXO_01441 PF01321 Creatinase/Prolidase N-terminal domain PXO_01441 PF00557 Metallopeptidase family M24 PXO_01444 PF13520 Amino acid permease PXO_01452 PF00082 Subtilase family PXO_01452 PF09286 Pro-kumamolisin, activation domain PXO_01457 PF07715 TonB-dependent Receptor Plug Domain PXO_01457 PF00593 TonB dependent receptor PXO_01458 PF07532 Bacterial Ig-like domain (group 4) PXO_01459 PF04616 Glycosyl hydrolases family 43 PXO_01463 PF00872 Transposase, Mutator family PXO_01477 PF00994 Probable molybdopterin binding domain PXO_01477 PF03453 MoeA N-terminal region (domain I and II) PXO_01477 PF03454 MoeA C-terminal region (domain IV) PXO_01478 PF12804 MobA-like NTP transferase domain PXO_01486 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PXO_01486 PF14824 Sirohaem biosynthesis protein central PXO_01486 PF10414 Sirohaem synthase dimerisation region PXO_01489 PF00072 Response regulator receiver domain PXO_01489 PF03861 ANTAR domain PXO_01500 PF05598 Transposase domain (DUF772) PXO_01500 PF01609 Transposase DDE domain PXO_01501 PF01609 Transposase DDE domain PXO_01501 PF05598 Transposase domain (DUF772) PXO_01507 PF17837 4'-phosphopantetheinyl transferase N-terminal domain PXO_01507 PF01648 4'-phosphopantetheinyl transferase superfamily PXO_01511 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PXO_01511 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PXO_01511 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PXO_01512 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PXO_01515 PF00072 Response regulator receiver domain PXO_01515 PF00196 Bacterial regulatory proteins, luxR family PXO_01517 PF10150 Ribonuclease E/G family PXO_01517 PF12111 Polyribonucleotide phosphorylase C terminal PXO_01517 PF00575 S1 RNA binding domain PXO_01518 PF01479 S4 domain PXO_01518 PF00849 RNA pseudouridylate synthase PXO_01519 PF11737 Protein of unknown function (DUF3300) PXO_01520 PF02535 ZIP Zinc transporter PXO_01521 PF02535 ZIP Zinc transporter PXO_01523 PF01329 Pterin 4 alpha carbinolamine dehydratase PXO_01524 PF01106 NifU-like domain PXO_01531 PF04717 Type VI secretion system, phage-baseplate injector PXO_01531 PF16671 Actin cross-linking domain PXO_01536 PF00488 MutS domain V PXO_01536 PF05188 MutS domain II PXO_01536 PF05190 MutS family domain IV PXO_01536 PF05192 MutS domain III PXO_01536 PF01624 MutS domain I PXO_01538 PF01527 Transposase PXO_01540 PF18073 Rubredoxin metal binding domain PXO_01541 PF13276 HTH-like domain PXO_01541 PF13683 Integrase core domain PXO_01543 PF01527 Transposase PXO_01545 PF04185 Phosphoesterase family PXO_01545 PF05506 Domain of unknown function (DUF756) PXO_01546 PF04185 Phosphoesterase family PXO_01546 PF05506 Domain of unknown function (DUF756) PXO_01547 PF05506 Domain of unknown function (DUF756) PXO_01547 PF04185 Phosphoesterase family PXO_01548 PF07690 Major Facilitator Superfamily PXO_01552 PF02938 GAD domain PXO_01552 PF00152 tRNA synthetases class II (D, K and N) PXO_01552 PF01336 OB-fold nucleic acid binding domain PXO_01555 PF01709 Transcriptional regulator PXO_01556 PF02075 Crossover junction endodeoxyribonuclease RuvC PXO_01557 PF07499 RuvA, C-terminal domain PXO_01557 PF01330 RuvA N terminal domain PXO_01558 PF02705 K+ potassium transporter PXO_01559 PF05491 RuvB C-terminal winged helix domain PXO_01559 PF17864 RuvB AAA lid domain PXO_01559 PF05496 Holliday junction DNA helicase RuvB P-loop domain PXO_01560 PF03061 Thioesterase superfamily PXO_01561 PF01618 MotA/TolQ/ExbB proton channel family PXO_01562 PF02472 Biopolymer transport protein ExbD/TolR PXO_01564 PF04052 TolB amino-terminal domain PXO_01564 PF07676 WD40-like Beta Propeller Repeat PXO_01565 PF00691 OmpA family PXO_01567 PF04055 Radical SAM superfamily PXO_01571 PF05598 Transposase domain (DUF772) PXO_01572 PF06508 Queuosine biosynthesis protein QueC PXO_01576 PF09382 RQC domain PXO_01576 PF00270 DEAD/DEAH box helicase PXO_01576 PF00271 Helicase conserved C-terminal domain PXO_01576 PF00570 HRDC domain PXO_01576 PF16124 RecQ zinc-binding PXO_01577 PF00210 Ferritin-like domain PXO_01578 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold PXO_01578 PF00271 Helicase conserved C-terminal domain PXO_01578 PF04408 Helicase associated domain (HA2) PXO_01578 PF11898 Domain of unknown function (DUF3418) PXO_01578 PF00270 DEAD/DEAH box helicase PXO_01580 PF02685 Glucokinase PXO_01581 PF02685 Glucokinase PXO_01582 PF02685 Glucokinase PXO_01588 PF04055 Radical SAM superfamily PXO_01588 PF13186 Iron-sulfur cluster-binding domain PXO_01589 PF05402 Coenzyme PQQ synthesis protein D (PqqD) PXO_01590 PF03070 TENA/THI-4/PQQC family PXO_01591 PF12706 Beta-lactamase superfamily domain PXO_01592 PF04607 Region found in RelA / SpoT proteins PXO_01592 PF02824 TGS domain PXO_01592 PF13291 ACT domain PXO_01594 PF00535 Glycosyl transferase family 2 PXO_01595 PF00912 Transglycosylase PXO_01595 PF00905 Penicillin binding protein transpeptidase domain PXO_01595 PF14814 Bifunctional transglycosylase second domain PXO_01597 PF04851 Type III restriction enzyme, res subunit PXO_01597 PF13307 Helicase C-terminal domain PXO_01598 PF00814 Glycoprotease family PXO_01599 PF03747 ADP-ribosylglycohydrolase PXO_01601 PF02951 Prokaryotic glutathione synthetase, N-terminal domain PXO_01601 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain PXO_01602 PF00072 Response regulator receiver domain PXO_01603 PF00072 Response regulator receiver domain PXO_01604 PF01584 CheW-like domain PXO_01605 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term PXO_01605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PXO_01607 PF01627 Hpt domain PXO_01607 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_01607 PF00072 Response regulator receiver domain PXO_01607 PF01584 CheW-like domain PXO_01610 PF13302 Acetyltransferase (GNAT) domain PXO_01616 PF12450 von Willebrand factor PXO_01616 PF00092 von Willebrand factor type A domain PXO_01616 PF12034 Domain of unknown function (DUF3520) PXO_01618 PF01112 Asparaginase PXO_01619 PF03932 CutC family PXO_01626 PF01301 Glycosyl hydrolases family 35 PXO_01627 PF07971 Glycosyl hydrolase family 92 PXO_01627 PF17678 Glycosyl hydrolase family 92 N-terminal domain PXO_01637 PF03412 Peptidase C39 family PXO_01637 PF00005 ABC transporter PXO_01637 PF00664 ABC transporter transmembrane region PXO_01638 PF07691 PA14 domain PXO_01638 PF01915 Glycosyl hydrolase family 3 C-terminal domain PXO_01638 PF00933 Glycosyl hydrolase family 3 N terminal domain PXO_01638 PF14310 Fibronectin type III-like domain PXO_01641 PF07691 PA14 domain PXO_01641 PF02838 Glycosyl hydrolase family 20, domain 2 PXO_01641 PF00728 Glycosyl hydrolase family 20, catalytic domain PXO_01642 PF00704 Glycosyl hydrolases family 18 PXO_01642 PF01476 LysM domain PXO_01645 PF02685 Glucokinase PXO_01646 PF04452 RNA methyltransferase PXO_01647 PF00202 Aminotransferase class-III PXO_01648 PF00293 NUDIX domain PXO_01649 PF00459 Inositol monophosphatase family PXO_01650 PF03819 MazG nucleotide pyrophosphohydrolase domain PXO_01651 PF02694 Uncharacterised BCR, YnfA/UPF0060 family PXO_01652 PF01145 SPFH domain / Band 7 family PXO_01652 PF16200 C-terminal region of band_7 PXO_01654 PF01571 Aminomethyltransferase folate-binding domain PXO_01654 PF08669 Glycine cleavage T-protein C-terminal barrel domain PXO_01656 PF01597 Glycine cleavage H-protein PXO_01663 PF09317 Domain of unknown function (DUF1974) PXO_01663 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PXO_01663 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PXO_01664 PF00561 alpha/beta hydrolase fold PXO_01665 PF00440 Bacterial regulatory proteins, tetR family PXO_01666 PF00593 TonB dependent receptor PXO_01666 PF07715 TonB-dependent Receptor Plug Domain PXO_01668 PF01430 Hsp33 protein PXO_01669 PF00912 Transglycosylase PXO_01670 PF00535 Glycosyl transferase family 2 PXO_01671 PF00571 CBS domain PXO_01671 PF00478 IMP dehydrogenase / GMP reductase domain PXO_01677 PF03006 Haemolysin-III related PXO_01678 PF00009 Elongation factor Tu GTP binding domain PXO_01678 PF16658 Class II release factor RF3, C-terminal domain PXO_01679 PF08525 Opacity-associated protein A N-terminal motif PXO_01679 PF01551 Peptidase family M23 PXO_01679 PF01476 LysM domain PXO_01680 PF00561 alpha/beta hydrolase fold PXO_01681 PF01053 Cys/Met metabolism PLP-dependent enzyme PXO_01682 PF00742 Homoserine dehydrogenase PXO_01682 PF03447 Homoserine dehydrogenase, NAD binding domain PXO_01682 PF00696 Amino acid kinase family PXO_01684 PF03315 Serine dehydratase beta chain PXO_01684 PF03313 Serine dehydratase alpha chain PXO_01687 PF04264 YceI-like domain PXO_01689 PF04264 YceI-like domain PXO_01690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_01690 PF00672 HAMP domain PXO_01690 PF17149 Periplasmic sensor domain found in signal transduction proteins PXO_01690 PF00512 His Kinase A (phospho-acceptor) domain PXO_01690 PF01627 Hpt domain PXO_01690 PF00072 Response regulator receiver domain PXO_01691 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_01691 PF00672 HAMP domain PXO_01691 PF17149 Periplasmic sensor domain found in signal transduction proteins PXO_01691 PF00072 Response regulator receiver domain PXO_01691 PF01627 Hpt domain PXO_01691 PF00512 His Kinase A (phospho-acceptor) domain PXO_01692 PF00512 His Kinase A (phospho-acceptor) domain PXO_01692 PF01627 Hpt domain PXO_01692 PF00072 Response regulator receiver domain PXO_01692 PF00672 HAMP domain PXO_01692 PF17149 Periplasmic sensor domain found in signal transduction proteins PXO_01692 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_01694 PF00665 Integrase core domain PXO_01694 PF13333 Integrase core domain PXO_01694 PF13276 HTH-like domain PXO_01702 PF06114 IrrE N-terminal-like domain PXO_01702 PF01381 Helix-turn-helix PXO_01702 PF09856 Predicted transcriptional regulator (DUF2083) PXO_01703 PF00171 Aldehyde dehydrogenase family PXO_01704 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PXO_01704 PF02770 Acyl-CoA dehydrogenase, middle domain PXO_01704 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PXO_01705 PF00378 Enoyl-CoA hydratase/isomerase PXO_01706 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PXO_01706 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PXO_01706 PF00378 Enoyl-CoA hydratase/isomerase PXO_01707 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PXO_01707 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PXO_01708 PF01545 Cation efflux family PXO_01709 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PXO_01709 PF00378 Enoyl-CoA hydratase/isomerase PXO_01709 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PXO_01711 PF08281 Sigma-70, region 4 PXO_01711 PF04542 Sigma-70 region 2 PXO_01713 PF13180 PDZ domain PXO_01714 PF00679 Elongation factor G C-terminus PXO_01714 PF03144 Elongation factor Tu domain 2 PXO_01714 PF06421 GTP-binding protein LepA C-terminus PXO_01714 PF00009 Elongation factor Tu GTP binding domain PXO_01715 PF10502 Signal peptidase, peptidase S26 PXO_01717 PF00035 Double-stranded RNA binding motif PXO_01717 PF14622 Ribonuclease-III-like PXO_01718 PF01926 50S ribosome-binding GTPase PXO_01718 PF07650 KH domain PXO_01719 PF02565 Recombination protein O C terminal PXO_01719 PF11967 Recombination protein O N terminal PXO_01722 PF05958 tRNA (Uracil-5-)-methyltransferase PXO_01724 PF01323 DSBA-like thioredoxin domain PXO_01726 PF01593 Flavin containing amine oxidoreductase PXO_01727 PF04244 Deoxyribodipyrimidine photo-lyase-related protein PXO_01728 PF00933 Glycosyl hydrolase family 3 N terminal domain PXO_01730 PF01048 Phosphorylase superfamily PXO_01731 PF00313 'Cold-shock' DNA-binding domain PXO_01733 PF01494 FAD binding domain PXO_01735 PF00271 Helicase conserved C-terminal domain PXO_01735 PF08494 DEAD/H associated PXO_01735 PF00270 DEAD/DEAH box helicase PXO_01736 PF04679 ATP dependent DNA ligase C terminal region PXO_01736 PF04675 DNA ligase N terminus PXO_01736 PF01068 ATP dependent DNA ligase domain PXO_01738 PF04679 ATP dependent DNA ligase C terminal region PXO_01738 PF04675 DNA ligase N terminus PXO_01738 PF01068 ATP dependent DNA ligase domain PXO_01741 PF00072 Response regulator receiver domain PXO_01741 PF00990 Diguanylate cyclase, GGDEF domain PXO_01744 PF02803 Thiolase, C-terminal domain PXO_01744 PF00108 Thiolase, N-terminal domain PXO_01745 PF00082 Subtilase family PXO_01745 PF12951 Passenger-associated-transport-repeat PXO_01745 PF03797 Autotransporter beta-domain PXO_01746 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PXO_01746 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PXO_01747 PF01863 Protein of unknown function DUF45 PXO_01748 PF07043 Protein of unknown function (DUF1328) PXO_01750 PF01258 Prokaryotic dksA/traR C4-type zinc finger PXO_01751 PF05598 Transposase domain (DUF772) PXO_01751 PF01609 Transposase DDE domain PXO_01757 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PXO_01761 PF08274 PhnA Zinc-Ribbon PXO_01761 PF03831 PhnA domain PXO_01763 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PXO_01764 PF07690 Major Facilitator Superfamily PXO_01770 PF09924 Uncharacterised conserved protein (DUF2156) PXO_01770 PF03706 Lysylphosphatidylglycerol synthase TM region PXO_01773 PF01042 Endoribonuclease L-PSP PXO_01782 PF04545 Sigma-70, region 4 PXO_01782 PF04542 Sigma-70 region 2 PXO_01788 PF04060 Putative Fe-S cluster PXO_01790 PF01588 Putative tRNA binding domain PXO_01790 PF09334 tRNA synthetases class I (M) PXO_01792 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PXO_01794 PF00324 Amino acid permease PXO_01795 PF02574 Homocysteine S-methyltransferase PXO_01798 PF02592 Putative vitamin uptake transporter PXO_01802 PF05598 Transposase domain (DUF772) PXO_01818 PF00005 ABC transporter PXO_01818 PF13732 Domain of unknown function (DUF4162) PXO_01819 PF07715 TonB-dependent Receptor Plug Domain PXO_01819 PF00593 TonB dependent receptor PXO_01820 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit PXO_01826 PF00588 SpoU rRNA Methylase family PXO_01826 PF08032 RNA 2'-O ribose methyltransferase substrate binding PXO_01828 PF00135 Carboxylesterase family PXO_01831 PF01741 Large-conductance mechanosensitive channel, MscL PXO_01832 PF01557 Fumarylacetoacetate (FAA) hydrolase family PXO_01834 PF13936 Helix-turn-helix domain PXO_01834 PF00665 Integrase core domain PXO_01836 PF05598 Transposase domain (DUF772) PXO_01839 PF02080 TrkA-C domain PXO_01839 PF03600 Citrate transporter PXO_01840 PF02390 Putative methyltransferase PXO_01841 PF05690 Thiazole biosynthesis protein ThiG PXO_01843 PF00657 GDSL-like Lipase/Acylhydrolase PXO_01843 PF03797 Autotransporter beta-domain PXO_01847 PF01527 Transposase PXO_01854 PF13936 Helix-turn-helix domain PXO_01854 PF00665 Integrase core domain PXO_01858 PF01609 Transposase DDE domain PXO_01858 PF05598 Transposase domain (DUF772) PXO_01859 PF00128 Alpha amylase, catalytic domain PXO_01859 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PXO_01862 PF01609 Transposase DDE domain PXO_01862 PF05598 Transposase domain (DUF772) PXO_01872 PF00085 Thioredoxin PXO_01874 PF08264 Anticodon-binding domain of tRNA PXO_01874 PF13603 Leucyl-tRNA synthetase, Domain 2 PXO_01874 PF00133 tRNA synthetases class I (I, L, M and V) PXO_01877 PF01467 Cytidylyltransferase-like PXO_01881 PF02590 Predicted SPOUT methyltransferase PXO_01885 PF04402 Protein of unknown function (DUF541) PXO_01886 PF02545 Maf-like protein PXO_01887 PF10150 Ribonuclease E/G family PXO_01887 PF00575 S1 RNA binding domain PXO_01889 PF13502 AsmA-like C-terminal region PXO_01889 PF13116 Protein of unknown function PXO_01891 PF01523 Putative modulator of DNA gyrase PXO_01892 PF04751 Protein of unknown function (DUF615) PXO_01893 PF01523 Putative modulator of DNA gyrase PXO_01897 PF00348 Polyprenyl synthetase PXO_01898 PF02609 Exonuclease VII small subunit PXO_01899 PF11734 TilS substrate C-terminal domain PXO_01899 PF09179 TilS substrate binding domain PXO_01899 PF01171 PP-loop family PXO_01900 PF00245 Alkaline phosphatase PXO_01901 PF00375 Sodium:dicarboxylate symporter family PXO_01906 PF00877 NlpC/P60 family PXO_01907 PF00877 NlpC/P60 family PXO_01908 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PXO_01909 PF04235 Protein of unknown function (DUF418) PXO_01910 PF01266 FAD dependent oxidoreductase PXO_01912 PF07992 Pyridine nucleotide-disulphide oxidoreductase PXO_01912 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PXO_01913 PF07992 Pyridine nucleotide-disulphide oxidoreductase PXO_01913 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PXO_01915 PF07992 Pyridine nucleotide-disulphide oxidoreductase PXO_01915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PXO_01920 PF11838 ERAP1-like C-terminal domain PXO_01920 PF01433 Peptidase family M1 domain PXO_01921 PF00873 AcrB/AcrD/AcrF family PXO_01922 PF00529 HlyD membrane-fusion protein of T1SS PXO_01922 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PXO_01924 PF02277 Phosphoribosyltransferase PXO_01926 PF02654 Cobalamin-5-phosphate synthase PXO_01927 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PXO_01927 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PXO_01929 PF07690 Major Facilitator Superfamily PXO_01930 PF04183 IucA / IucC family PXO_01930 PF06276 Ferric iron reductase FhuF-like transporter PXO_01932 PF00593 TonB dependent receptor PXO_01932 PF07660 Secretin and TonB N terminus short domain PXO_01932 PF07715 TonB-dependent Receptor Plug Domain PXO_01934 PF01527 Transposase PXO_01936 PF02254 TrkA-N domain PXO_01936 PF00999 Sodium/hydrogen exchanger family PXO_01938 PF00593 TonB dependent receptor PXO_01938 PF07715 TonB-dependent Receptor Plug Domain PXO_01939 PF07715 TonB-dependent Receptor Plug Domain PXO_01939 PF00593 TonB dependent receptor PXO_01941 PF00593 TonB dependent receptor PXO_01941 PF07715 TonB-dependent Receptor Plug Domain PXO_01943 PF12848 ABC transporter PXO_01943 PF00005 ABC transporter PXO_01945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PXO_01945 PF03466 LysR substrate binding domain PXO_01948 PF07859 alpha/beta hydrolase fold PXO_01948 PF13472 GDSL-like Lipase/Acylhydrolase family PXO_01953 PF12833 Helix-turn-helix domain PXO_01954 PF00183 Hsp90 protein PXO_01954 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_01958 PF13276 HTH-like domain PXO_01959 PF01527 Transposase PXO_01962 PF00872 Transposase, Mutator family PXO_01963 PF00120 Glutamine synthetase, catalytic domain PXO_01964 PF01053 Cys/Met metabolism PLP-dependent enzyme PXO_01965 PF00266 Aminotransferase class-V PXO_01971 PF13276 HTH-like domain PXO_01973 PF05598 Transposase domain (DUF772) PXO_01973 PF01609 Transposase DDE domain PXO_01974 PF00355 Rieske [2Fe-2S] domain PXO_01976 PF00266 Aminotransferase class-V PXO_01977 PF01458 Uncharacterized protein family (UPF0051) PXO_01978 PF00005 ABC transporter PXO_01979 PF01458 Uncharacterized protein family (UPF0051) PXO_01980 PF02082 Transcriptional regulator PXO_01983 PF01965 DJ-1/PfpI family PXO_01991 PF14748 Pyrroline-5-carboxylate reductase dimerisation PXO_01991 PF03807 NADP oxidoreductase coenzyme F420-dependent PXO_01992 PF01168 Alanine racemase, N-terminal domain PXO_01993 PF00437 Type II/IV secretion system protein PXO_01994 PF00437 Type II/IV secretion system protein PXO_01997 PF13673 Acetyltransferase (GNAT) domain PXO_01997 PF13302 Acetyltransferase (GNAT) domain PXO_01997 PF00117 Glutamine amidotransferase class-I PXO_01997 PF03352 Methyladenine glycosylase PXO_01997 PF00958 GMP synthase C terminal domain PXO_02000 PF02622 Uncharacterized ACR, COG1678 PXO_02001 PF03652 Holliday junction resolvase PXO_02002 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PXO_02002 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PXO_02004 PF02566 OsmC-like protein PXO_02007 PF02567 Phenazine biosynthesis-like protein PXO_02010 PF01842 ACT domain PXO_02010 PF00696 Amino acid kinase family PXO_02013 PF08245 Mur ligase middle domain PXO_02016 PF00348 Polyprenyl synthetase PXO_02018 PF00436 Single-strand binding protein family PXO_02019 PF00563 EAL domain PXO_02019 PF01590 GAF domain PXO_02019 PF00360 Phytochrome region PXO_02019 PF00990 Diguanylate cyclase, GGDEF domain PXO_02025 PF04328 Selenoprotein, putative PXO_02026 PF13722 5TM C-terminal transporter carbon starvation CstA PXO_02026 PF02554 Carbon starvation protein CstA PXO_02027 PF05726 Pirin C-terminal cupin domain PXO_02027 PF02678 Pirin PXO_02029 PF04717 Type VI secretion system, phage-baseplate injector PXO_02036 PF16671 Actin cross-linking domain PXO_02036 PF04717 Type VI secretion system, phage-baseplate injector PXO_02038 PF04717 Type VI secretion system, phage-baseplate injector PXO_02038 PF16671 Actin cross-linking domain PXO_02039 PF00182 Chitinase class I PXO_02040 PF04717 Type VI secretion system, phage-baseplate injector PXO_02040 PF16671 Actin cross-linking domain PXO_02051 PF17871 AAA lid domain PXO_02051 PF07724 AAA domain (Cdc48 subfamily) PXO_02051 PF00004 ATPase family associated with various cellular activities (AAA) PXO_02051 PF10431 C-terminal, D2-small domain, of ClpB protein PXO_02054 PF04717 Type VI secretion system, phage-baseplate injector PXO_02054 PF16671 Actin cross-linking domain PXO_02063 PF01420 Type I restriction modification DNA specificity domain PXO_02064 PF02384 N-6 DNA Methylase PXO_02066 PF04851 Type III restriction enzyme, res subunit PXO_02066 PF00271 Helicase conserved C-terminal domain PXO_02066 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) PXO_02066 PF08463 EcoEI R protein C-terminal PXO_02070 PF08463 EcoEI R protein C-terminal PXO_02070 PF00271 Helicase conserved C-terminal domain PXO_02070 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) PXO_02070 PF04851 Type III restriction enzyme, res subunit PXO_02073 PF12161 HsdM N-terminal domain PXO_02073 PF02384 N-6 DNA Methylase PXO_02076 PF01420 Type I restriction modification DNA specificity domain PXO_02083 PF13456 Reverse transcriptase-like PXO_02083 PF00300 Histidine phosphatase superfamily (branch 1) PXO_02084 PF01256 Carbohydrate kinase PXO_02085 PF01256 Carbohydrate kinase PXO_02088 PF00717 Peptidase S24-like PXO_02088 PF01726 LexA DNA binding domain PXO_02092 PF14579 Helix-hairpin-helix motif PXO_02092 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PXO_02092 PF02811 PHP domain PXO_02092 PF07733 Bacterial DNA polymerase III alpha NTPase domain PXO_02096 PF03169 OPT oligopeptide transporter protein PXO_02099 PF07676 WD40-like Beta Propeller Repeat PXO_02099 PF00326 Prolyl oligopeptidase family PXO_02099 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region PXO_02101 PF05598 Transposase domain (DUF772) PXO_02106 PF02311 AraC-like ligand binding domain PXO_02106 PF12833 Helix-turn-helix domain PXO_02109 PF18011 C-terminal domain found in long catalases PXO_02109 PF06628 Catalase-related immune-responsive PXO_02109 PF00199 Catalase PXO_02116 PF00162 Phosphoglycerate kinase PXO_02118 PF00224 Pyruvate kinase, barrel domain PXO_02118 PF02887 Pyruvate kinase, alpha/beta domain PXO_02119 PF00274 Fructose-bisphosphate aldolase class-I PXO_02120 PF01661 Macro domain PXO_02123 PF00291 Pyridoxal-phosphate dependent enzyme PXO_02124 PF10414 Sirohaem synthase dimerisation region PXO_02124 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PXO_02124 PF14824 Sirohaem biosynthesis protein central PXO_02125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PXO_02125 PF03466 LysR substrate binding domain PXO_02127 PF00072 Response regulator receiver domain PXO_02127 PF00512 His Kinase A (phospho-acceptor) domain PXO_02127 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_02127 PF01627 Hpt domain PXO_02127 PF00672 HAMP domain PXO_02131 PF01507 Phosphoadenosine phosphosulfate reductase family PXO_02132 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PXO_02132 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PXO_02133 PF00175 Oxidoreductase NAD-binding domain PXO_02133 PF00258 Flavodoxin PXO_02133 PF00667 FAD binding domain PXO_02134 PF01507 Phosphoadenosine phosphosulfate reductase family PXO_02135 PF00009 Elongation factor Tu GTP binding domain PXO_02140 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP PXO_02140 PF12557 Cob(I)alamin adenosyltransferase N terminal PXO_02141 PF00155 Aminotransferase class I and II PXO_02143 PF00448 SRP54-type protein, GTPase domain PXO_02143 PF02978 Signal peptide binding domain PXO_02143 PF02881 SRP54-type protein, helical bundle domain PXO_02145 PF03060 Nitronate monooxygenase PXO_02147 PF00886 Ribosomal protein S16 PXO_02148 PF05239 PRC-barrel domain PXO_02148 PF01782 RimM N-terminal domain PXO_02149 PF01746 tRNA (Guanine-1)-methyltransferase PXO_02150 PF01245 Ribosomal protein L19 PXO_02151 PF01554 MatE PXO_02152 PF01479 S4 domain PXO_02157 PF01541 GIY-YIG catalytic domain PXO_02158 PF10431 C-terminal, D2-small domain, of ClpB protein PXO_02158 PF17871 AAA lid domain PXO_02158 PF07724 AAA domain (Cdc48 subfamily) PXO_02158 PF00004 ATPase family associated with various cellular activities (AAA) PXO_02158 PF02861 Clp amino terminal domain, pathogenicity island component PXO_02161 PF13683 Integrase core domain PXO_02161 PF13276 HTH-like domain PXO_02166 PF07715 TonB-dependent Receptor Plug Domain PXO_02166 PF00593 TonB dependent receptor PXO_02172 PF03377 TAL effector repeat PXO_02175 PF13936 Helix-turn-helix domain PXO_02175 PF00665 Integrase core domain PXO_02179 PF01208 Uroporphyrinogen decarboxylase (URO-D) PXO_02181 PF01761 3-dehydroquinate synthase PXO_02182 PF01202 Shikimate kinase PXO_02183 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region PXO_02183 PF01243 Pyridoxamine 5'-phosphate oxidase PXO_02185 PF04012 PspA/IM30 family PXO_02190 PF03738 Glutathionylspermidine synthase preATP-grasp PXO_02196 PF09278 MerR, DNA binding PXO_02196 PF00376 MerR family regulatory protein PXO_02203 PF12706 Beta-lactamase superfamily domain PXO_02208 PF00324 Amino acid permease PXO_02209 PF00196 Bacterial regulatory proteins, luxR family PXO_02210 PF00561 alpha/beta hydrolase fold PXO_02211 PF00324 Amino acid permease PXO_02214 PF01654 Cytochrome bd terminal oxidase subunit I PXO_02215 PF02322 Cytochrome bd terminal oxidase subunit II PXO_02216 PF00756 Putative esterase PXO_02217 PF00571 CBS domain PXO_02217 PF01769 Divalent cation transporter PXO_02217 PF03448 MgtE intracellular N domain PXO_02219 PF02896 PEP-utilising enzyme, TIM barrel domain PXO_02219 PF05524 PEP-utilising enzyme, N-terminal PXO_02219 PF00391 PEP-utilising enzyme, mobile domain PXO_02220 PF00381 PTS HPr component phosphorylation site PXO_02223 PF03668 P-loop ATPase protein family PXO_02224 PF07475 HPr Serine kinase C-terminal domain PXO_02224 PF02603 HPr Serine kinase N terminus PXO_02225 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PXO_02226 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein PXO_02227 PF04552 Sigma-54, DNA binding domain PXO_02227 PF04963 Sigma-54 factor, core binding domain PXO_02227 PF00309 Sigma-54 factor, Activator interacting domain (AID) PXO_02228 PF00005 ABC transporter PXO_02229 PF03968 OstA-like protein PXO_02232 PF01380 SIS domain PXO_02232 PF00571 CBS domain PXO_02233 PF01722 BolA-like protein PXO_02234 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PXO_02238 PF00551 Formyl transferase PXO_02241 PF00586 AIR synthase related protein, N-terminal domain PXO_02241 PF02769 AIR synthase related protein, C-terminal domain PXO_02243 PF01594 AI-2E family transporter PXO_02244 PF00308 Bacterial dnaA protein PXO_02245 PF00483 Nucleotidyl transferase PXO_02246 PF01636 Phosphotransferase enzyme family PXO_02249 PF07687 Peptidase dimerisation domain PXO_02249 PF01546 Peptidase family M20/M25/M40 PXO_02251 PF13333 Integrase core domain PXO_02251 PF00665 Integrase core domain PXO_02251 PF13276 HTH-like domain PXO_02252 PF13333 Integrase core domain PXO_02252 PF13276 HTH-like domain PXO_02252 PF00665 Integrase core domain PXO_02253 PF01527 Transposase PXO_02255 PF05598 Transposase domain (DUF772) PXO_02260 PF06964 Alpha-L-arabinofuranosidase C-terminal domain PXO_02261 PF01263 Aldose 1-epimerase PXO_02262 PF01578 Cytochrome C assembly protein PXO_02269 PF03377 TAL effector repeat PXO_02272 PF03377 TAL effector repeat PXO_02274 PF13276 HTH-like domain PXO_02274 PF00665 Integrase core domain PXO_02274 PF13333 Integrase core domain PXO_02277 PF00202 Aminotransferase class-III PXO_02282 PF00127 Copper binding proteins, plastocyanin/azurin family PXO_02287 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PXO_02287 PF00034 Cytochrome c PXO_02293 PF00202 Aminotransferase class-III PXO_02294 PF00520 Ion transport protein PXO_02294 PF00027 Cyclic nucleotide-binding domain PXO_02301 PF05598 Transposase domain (DUF772) PXO_02301 PF01609 Transposase DDE domain PXO_02302 PF08443 RimK-like ATP-grasp domain PXO_02302 PF18030 RimK PreATP-grasp domain PXO_02303 PF00486 Transcriptional regulatory protein, C terminal PXO_02303 PF00072 Response regulator receiver domain PXO_02304 PF05598 Transposase domain (DUF772) PXO_02304 PF01609 Transposase DDE domain PXO_02305 PF00512 His Kinase A (phospho-acceptor) domain PXO_02305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_02305 PF00672 HAMP domain PXO_02308 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PXO_02308 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PXO_02317 PF04273 Putative phosphatase (DUF442) PXO_02317 PF00753 Metallo-beta-lactamase superfamily PXO_02319 PF00528 Binding-protein-dependent transport system inner membrane component PXO_02320 PF00005 ABC transporter PXO_02320 PF03459 TOBE domain PXO_02325 PF00512 His Kinase A (phospho-acceptor) domain PXO_02325 PF08521 Two-component sensor kinase N-terminal PXO_02325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_02326 PF00072 Response regulator receiver domain PXO_02326 PF00486 Transcriptional regulatory protein, C terminal PXO_02331 PF00501 AMP-binding enzyme PXO_02338 PF01476 LysM domain PXO_02338 PF03734 L,D-transpeptidase catalytic domain PXO_02339 PF01551 Peptidase family M23 PXO_02339 PF04225 Opacity-associated protein A LysM-like domain PXO_02340 PF07715 TonB-dependent Receptor Plug Domain PXO_02340 PF00593 TonB dependent receptor PXO_02341 PF02779 Transketolase, pyrimidine binding domain PXO_02341 PF02780 Transketolase, C-terminal domain PXO_02341 PF00456 Transketolase, thiamine diphosphate binding domain PXO_02342 PF00375 Sodium:dicarboxylate symporter family PXO_02344 PF07584 Aerotolerance regulator N-terminal PXO_02344 PF00092 von Willebrand factor type A domain PXO_02348 PF17863 AAA lid domain PXO_02348 PF07726 ATPase family associated with various cellular activities (AAA) PXO_02351 PF07660 Secretin and TonB N terminus short domain PXO_02351 PF03958 Bacterial type II/III secretion system short domain PXO_02351 PF00263 Bacterial type II and III secretion system protein PXO_02351 PF11741 AMIN domain PXO_02356 PF17092 Penicillin-binding protein OB-like domain PXO_02356 PF00912 Transglycosylase PXO_02356 PF00905 Penicillin binding protein transpeptidase domain PXO_02359 PF00285 Citrate synthase, C-terminal domain PXO_02360 PF01197 Ribosomal protein L31 PXO_02361 PF01156 Inosine-uridine preferring nucleoside hydrolase PXO_02362 PF17191 RecG wedge domain PXO_02362 PF00271 Helicase conserved C-terminal domain PXO_02362 PF00270 DEAD/DEAH box helicase PXO_02363 PF01042 Endoribonuclease L-PSP PXO_02364 PF04607 Region found in RelA / SpoT proteins PXO_02364 PF13291 ACT domain PXO_02364 PF02824 TGS domain PXO_02365 PF01192 RNA polymerase Rpb6 PXO_02367 PF00625 Guanylate kinase PXO_02368 PF08340 Domain of unknown function (DUF1732) PXO_02368 PF03755 YicC-like family, N-terminal region PXO_02369 PF03725 3' exoribonuclease family, domain 2 PXO_02369 PF01138 3' exoribonuclease family, domain 1 PXO_02371 PF01725 Ham1 family PXO_02372 PF06969 HemN C-terminal domain PXO_02372 PF04055 Radical SAM superfamily PXO_02375 PF00557 Metallopeptidase family M24 PXO_02378 PF00557 Metallopeptidase family M24 PXO_02378 PF05195 Aminopeptidase P, N-terminal domain PXO_02379 PF03695 Uncharacterised protein family (UPF0149) PXO_02381 PF05164 Cell division protein ZapA PXO_02382 PF01812 5-formyltetrahydrofolate cyclo-ligase family PXO_02384 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) PXO_02386 PF13369 Transglutaminase-like superfamily PXO_02387 PF00301 Rubredoxin PXO_02388 PF02581 Thiamine monophosphate synthase PXO_02391 PF13276 HTH-like domain PXO_02391 PF13683 Integrase core domain PXO_02392 PF13276 HTH-like domain PXO_02392 PF00665 Integrase core domain PXO_02392 PF13333 Integrase core domain PXO_02393 PF01527 Transposase PXO_02395 PF01515 Phosphate acetyl/butaryl transferase PXO_02395 PF00390 Malic enzyme, N-terminal domain PXO_02395 PF03949 Malic enzyme, NAD binding domain PXO_02396 PF00375 Sodium:dicarboxylate symporter family PXO_02398 PF00512 His Kinase A (phospho-acceptor) domain PXO_02398 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_02399 PF07690 Major Facilitator Superfamily PXO_02400 PF03466 LysR substrate binding domain PXO_02400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PXO_02404 PF00072 Response regulator receiver domain PXO_02404 PF00196 Bacterial regulatory proteins, luxR family PXO_02406 PF00512 His Kinase A (phospho-acceptor) domain PXO_02406 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_02406 PF08521 Two-component sensor kinase N-terminal PXO_02407 PF00486 Transcriptional regulatory protein, C terminal PXO_02407 PF00072 Response regulator receiver domain PXO_02410 PF03600 Citrate transporter PXO_02411 PF00106 short chain dehydrogenase PXO_02412 PF00356 Bacterial regulatory proteins, lacI family PXO_02416 PF00128 Alpha amylase, catalytic domain PXO_02419 PF03193 RsgA GTPase PXO_02423 PF01522 Polysaccharide deacetylase PXO_02424 PF00462 Glutaredoxin PXO_02433 PF01327 Polypeptide deformylase PXO_02434 PF03960 ArsC family PXO_02436 PF07726 ATPase family associated with various cellular activities (AAA) PXO_02436 PF17863 AAA lid domain PXO_02438 PF11992 Domain of unknown function (DUF3488) PXO_02438 PF13559 Domain of unknown function (DUF4129) PXO_02438 PF01841 Transglutaminase-like superfamily PXO_02440 PF01230 HIT domain PXO_02441 PF13662 Toprim domain PXO_02441 PF02132 RecR protein PXO_02442 PF02575 YbaB/EbfC DNA-binding family PXO_02443 PF12169 DNA polymerase III subunits gamma and tau domain III PXO_02443 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding PXO_02443 PF12170 DNA polymerase III tau subunit V interacting with alpha PXO_02445 PF02391 MoaE protein PXO_02446 PF02597 ThiS family PXO_02447 PF01967 MoaC family PXO_02449 PF04055 Radical SAM superfamily PXO_02449 PF06463 Molybdenum Cofactor Synthesis C PXO_02450 PF12706 Beta-lactamase superfamily domain PXO_02450 PF00753 Metallo-beta-lactamase superfamily PXO_02452 PF01075 Glycosyltransferase family 9 (heptosyltransferase) PXO_02454 PF13356 Arm DNA-binding domain PXO_02454 PF00589 Phage integrase family PXO_02464 PF16671 Actin cross-linking domain PXO_02464 PF04717 Type VI secretion system, phage-baseplate injector PXO_02468 PF00929 Exonuclease PXO_02469 PF00075 RNase H PXO_02471 PF00753 Metallo-beta-lactamase superfamily PXO_02471 PF16123 Hydroxyacylglutathione hydrolase C-terminus PXO_02472 PF01476 LysM domain PXO_02472 PF05257 CHAP domain PXO_02474 PF00216 Bacterial DNA-binding protein PXO_02475 PF02190 ATP-dependent protease La (LON) substrate-binding domain PXO_02475 PF05362 Lon protease (S16) C-terminal proteolytic domain PXO_02475 PF00004 ATPase family associated with various cellular activities (AAA) PXO_02476 PF07724 AAA domain (Cdc48 subfamily) PXO_02476 PF06689 ClpX C4-type zinc finger PXO_02476 PF10431 C-terminal, D2-small domain, of ClpB protein PXO_02477 PF00574 Clp protease PXO_02478 PF05698 Bacterial trigger factor protein (TF) C-terminus PXO_02478 PF05697 Bacterial trigger factor protein (TF) PXO_02480 PF01695 IstB-like ATP binding protein PXO_02482 PF13276 HTH-like domain PXO_02483 PF01527 Transposase PXO_02485 PF00180 Isocitrate/isopropylmalate dehydrogenase PXO_02485 PF18324 Hypothetical protein TT1725 PXO_02490 PF00462 Glutaredoxin PXO_02491 PF13181 Tetratricopeptide repeat PXO_02491 PF01435 Peptidase family M48 PXO_02492 PF00072 Response regulator receiver domain PXO_02492 PF00486 Transcriptional regulatory protein, C terminal PXO_02493 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_02493 PF11808 Phosphate regulon sensor protein PhoR PXO_02493 PF00989 PAS fold PXO_02493 PF00512 His Kinase A (phospho-acceptor) domain PXO_02495 PF13090 Polyphosphate kinase C-terminal domain 2 PXO_02495 PF17941 Polyphosphate kinase C-terminal domain 1 PXO_02495 PF02503 Polyphosphate kinase middle domain PXO_02495 PF13089 Polyphosphate kinase N-terminal domain PXO_02496 PF02541 Ppx/GppA phosphatase family PXO_02497 PF13439 Glycosyltransferase Family 4 PXO_02497 PF00534 Glycosyl transferases group 1 PXO_02498 PF01569 PAP2 superfamily PXO_02499 PF00149 Calcineurin-like phosphoesterase PXO_02503 PF04305 Protein of unknown function (DUF455) PXO_02504 PF00156 Phosphoribosyl transferase domain PXO_02507 PF02875 Mur ligase family, glutamate ligase domain PXO_02507 PF08245 Mur ligase middle domain PXO_02509 PF00300 Histidine phosphatase superfamily (branch 1) PXO_02510 PF10459 Peptidase S46 PXO_02511 PF04185 Phosphoesterase family PXO_02511 PF05506 Domain of unknown function (DUF756) PXO_02513 PF08240 Alcohol dehydrogenase GroES-like domain PXO_02513 PF00107 Zinc-binding dehydrogenase PXO_02515 PF17850 CysA C-terminal regulatory domain PXO_02515 PF12857 TOBE-like domain PXO_02515 PF00005 ABC transporter PXO_02516 PF00528 Binding-protein-dependent transport system inner membrane component PXO_02517 PF00528 Binding-protein-dependent transport system inner membrane component PXO_02519 PF00155 Aminotransferase class I and II PXO_02520 PF00849 RNA pseudouridylate synthase PXO_02523 PF00691 OmpA family PXO_02523 PF05736 OprF membrane domain PXO_02525 PF00107 Zinc-binding dehydrogenase PXO_02525 PF08240 Alcohol dehydrogenase GroES-like domain PXO_02526 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PXO_02526 PF07992 Pyridine nucleotide-disulphide oxidoreductase PXO_02528 PF01527 Transposase PXO_02529 PF13276 HTH-like domain PXO_02530 PF13276 HTH-like domain PXO_02530 PF13683 Integrase core domain PXO_02535 PF03009 Glycerophosphoryl diester phosphodiesterase family PXO_02544 PF00043 Glutathione S-transferase, C-terminal domain PXO_02544 PF02798 Glutathione S-transferase, N-terminal domain PXO_02545 PF00056 lactate/malate dehydrogenase, NAD binding domain PXO_02545 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PXO_02546 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PXO_02551 PF01474 Class-II DAHP synthetase family PXO_02553 PF02600 Disulfide bond formation protein DsbB PXO_02554 PF05598 Transposase domain (DUF772) PXO_02555 PF01527 Transposase PXO_02556 PF13276 HTH-like domain PXO_02558 PF05598 Transposase domain (DUF772) PXO_02564 PF13683 Integrase core domain PXO_02564 PF13276 HTH-like domain PXO_02569 PF05598 Transposase domain (DUF772) PXO_02572 PF01527 Transposase PXO_02575 PF00849 RNA pseudouridylate synthase PXO_02585 PF01062 Bestrophin, RFP-TM, chloride channel PXO_02587 PF01225 Mur ligase family, catalytic domain PXO_02587 PF02875 Mur ligase family, glutamate ligase domain PXO_02587 PF08245 Mur ligase middle domain PXO_02589 PF00365 Phosphofructokinase PXO_02598 PF00719 Inorganic pyrophosphatase PXO_02600 PF00593 TonB dependent receptor PXO_02600 PF07715 TonB-dependent Receptor Plug Domain PXO_02601 PF12833 Helix-turn-helix domain PXO_02602 PF00486 Transcriptional regulatory protein, C terminal PXO_02602 PF18500 CadC C-terminal domain 1 PXO_02603 PF01964 Radical SAM ThiC family PXO_02603 PF13667 ThiC-associated domain PXO_02605 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain PXO_02605 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain PXO_02606 PF00205 Thiamine pyrophosphate enzyme, central domain PXO_02606 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PXO_02606 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PXO_02608 PF00291 Pyridoxal-phosphate dependent enzyme PXO_02609 PF00682 HMGL-like PXO_02609 PF08502 LeuA allosteric (dimerisation) domain PXO_02610 PF00180 Isocitrate/isopropylmalate dehydrogenase PXO_02611 PF08241 Methyltransferase domain PXO_02612 PF00694 Aconitase C-terminal domain PXO_02613 PF00330 Aconitase family (aconitate hydratase) PXO_02614 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PXO_02615 PF05230 MASE2 domain PXO_02615 PF00990 Diguanylate cyclase, GGDEF domain PXO_02621 PF02321 Outer membrane efflux protein PXO_02622 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) PXO_02623 PF03279 Bacterial lipid A biosynthesis acyltransferase PXO_02629 PF05598 Transposase domain (DUF772) PXO_02632 PF11838 ERAP1-like C-terminal domain PXO_02632 PF01433 Peptidase family M1 domain PXO_02633 PF00709 Adenylosuccinate synthetase PXO_02635 PF01145 SPFH domain / Band 7 family PXO_02636 PF01145 SPFH domain / Band 7 family PXO_02636 PF12221 Bacterial membrane protein N terminal PXO_02637 PF00072 Response regulator receiver domain PXO_02638 PF01556 DnaJ C terminal domain PXO_02638 PF00226 DnaJ domain PXO_02641 PF08534 Redoxin PXO_02649 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain PXO_02649 PF01464 Transglycosylase SLT domain PXO_02650 PF00544 Pectate lyase PXO_02652 PF13683 Integrase core domain PXO_02652 PF13276 HTH-like domain PXO_02654 PF05598 Transposase domain (DUF772) PXO_02657 PF08264 Anticodon-binding domain of tRNA PXO_02657 PF10458 Valyl tRNA synthetase tRNA binding arm PXO_02657 PF00133 tRNA synthetases class I (I, L, M and V) PXO_02660 PF02789 Cytosol aminopeptidase family, N-terminal domain PXO_02660 PF00883 Cytosol aminopeptidase family, catalytic domain PXO_02662 PF03739 Lipopolysaccharide export system permease LptF/LptG PXO_02665 PF00589 Phage integrase family PXO_02665 PF02899 Phage integrase, N-terminal SAM-like domain PXO_02667 PF13098 Thioredoxin-like domain PXO_02667 PF10411 Disulfide bond isomerase protein N-terminus PXO_02669 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain PXO_02669 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal PXO_02669 PF02769 AIR synthase related protein, C-terminal domain PXO_02671 PF05662 Coiled stalk of trimeric autotransporter adhesin PXO_02671 PF13018 Extended Signal Peptide of Type V secretion system PXO_02671 PF05658 Head domain of trimeric autotransporter adhesin PXO_02671 PF03895 YadA-like membrane anchor domain PXO_02672 PF00082 Subtilase family PXO_02673 PF04151 Bacterial pre-peptidase C-terminal domain PXO_02673 PF00082 Subtilase family PXO_02674 PF00082 Subtilase family PXO_02674 PF01483 Proprotein convertase P-domain PXO_02675 PF00437 Type II/IV secretion system protein PXO_02675 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain PXO_02677 PF00482 Type II secretion system (T2SS), protein F PXO_02678 PF08334 Type II secretion system (T2SS), protein G PXO_02679 PF12019 Type II transport protein GspH PXO_02680 PF07963 Prokaryotic N-terminal methylation motif PXO_02682 PF03934 Type II secretion system (T2SS), protein K PXO_02683 PF05137 Fimbrial assembly protein (PilN) PXO_02684 PF10741 Type II secretion system (T2SS), protein M subtype b PXO_02686 PF03958 Bacterial type II/III secretion system short domain PXO_02686 PF00263 Bacterial type II and III secretion system protein PXO_02688 PF07702 UTRA domain PXO_02688 PF00392 Bacterial regulatory proteins, gntR family PXO_02690 PF00593 TonB dependent receptor PXO_02690 PF07715 TonB-dependent Receptor Plug Domain PXO_02695 PF09827 CRISPR associated protein Cas2 PXO_02696 PF01867 CRISPR associated protein Cas1 PXO_02700 PF09704 CRISPR-associated protein (Cas_Cas5) PXO_02703 PF02545 Maf-like protein PXO_02704 PF02620 Large ribosomal RNA subunit accumulation protein YceD PXO_02705 PF01783 Ribosomal L32p protein family PXO_02706 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PXO_02706 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PXO_02708 PF00698 Acyl transferase domain PXO_02710 PF00550 Phosphopantetheine attachment site PXO_02711 PF00109 Beta-ketoacyl synthase, N-terminal domain PXO_02711 PF02801 Beta-ketoacyl synthase, C-terminal domain PXO_02712 PF00425 chorismate binding enzyme PXO_02712 PF04715 Anthranilate synthase component I, N terminal region PXO_02713 PF02618 YceG-like family PXO_02714 PF09115 DNA polymerase III, delta subunit, C terminal PXO_02717 PF02954 Bacterial regulatory protein, Fis family PXO_02717 PF00158 Sigma-54 interaction domain PXO_02717 PF06506 Propionate catabolism activator PXO_02719 PF00285 Citrate synthase, C-terminal domain PXO_02721 PF00330 Aconitase family (aconitate hydratase) PXO_02721 PF00694 Aconitase C-terminal domain PXO_02726 PF04303 PrpF protein PXO_02728 PF07715 TonB-dependent Receptor Plug Domain PXO_02728 PF00593 TonB dependent receptor PXO_02738 PF01609 Transposase DDE domain PXO_02738 PF05598 Transposase domain (DUF772) PXO_02742 PF01527 Transposase PXO_02746 PF13360 PQQ-like domain PXO_02746 PF01011 PQQ enzyme repeat PXO_02746 PF13570 PQQ-like domain PXO_02749 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain PXO_02749 PF06165 Glycosyltransferase family 36 PXO_02752 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_02752 PF00512 His Kinase A (phospho-acceptor) domain PXO_02753 PF02659 Putative manganese efflux pump PXO_02755 PF09339 IclR helix-turn-helix domain PXO_02755 PF01614 Bacterial transcriptional regulator PXO_02756 PF07690 Major Facilitator Superfamily PXO_02757 PF05336 L-rhamnose mutarotase PXO_02761 PF01432 Peptidase family M3 PXO_02765 PF00472 RF-1 domain PXO_02767 PF00849 RNA pseudouridylate synthase PXO_02769 PF03109 ABC1 family PXO_02772 PF07478 D-ala D-ala ligase C-terminus PXO_02772 PF01820 D-ala D-ala ligase N-terminus PXO_02774 PF05598 Transposase domain (DUF772) PXO_02788 PF02558 Ketopantoate reductase PanE/ApbA PXO_02788 PF08546 Ketopantoate reductase PanE/ApbA C terminal PXO_02790 PF01061 ABC-2 type transporter PXO_02791 PF00005 ABC transporter PXO_02792 PF01383 CpcD/allophycocyanin linker domain PXO_02792 PF00175 Oxidoreductase NAD-binding domain PXO_02793 PF01545 Cation efflux family PXO_02794 PF02583 Metal-sensitive transcriptional repressor PXO_02797 PF01381 Helix-turn-helix PXO_02799 PF00005 ABC transporter PXO_02802 PF04820 Tryptophan halogenase PXO_02807 PF02798 Glutathione S-transferase, N-terminal domain PXO_02807 PF00043 Glutathione S-transferase, C-terminal domain PXO_02809 PF00326 Prolyl oligopeptidase family PXO_02809 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region PXO_02814 PF00490 Delta-aminolevulinic acid dehydratase PXO_02817 PF03466 LysR substrate binding domain PXO_02817 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PXO_02819 PF00175 Oxidoreductase NAD-binding domain PXO_02819 PF00258 Flavodoxin PXO_02819 PF00667 FAD binding domain PXO_02821 PF18317 Shikimate 5'-dehydrogenase C-terminal domain PXO_02821 PF01488 Shikimate / quinate 5-dehydrogenase PXO_02821 PF08501 Shikimate dehydrogenase substrate binding domain PXO_02825 PF06733 DEAD_2 PXO_02825 PF13307 Helicase C-terminal domain PXO_02828 PF13533 Biotin-lipoyl like PXO_02830 PF06628 Catalase-related immune-responsive PXO_02830 PF00199 Catalase PXO_02834 PF01207 Dihydrouridine synthase (Dus) PXO_02836 PF00486 Transcriptional regulatory protein, C terminal PXO_02836 PF00072 Response regulator receiver domain PXO_02837 PF00512 His Kinase A (phospho-acceptor) domain PXO_02837 PF00672 HAMP domain PXO_02837 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_02840 PF06167 Glucose-regulated metallo-peptidase M90 PXO_02842 PF02237 Biotin protein ligase C terminal domain PXO_02842 PF08279 HTH domain PXO_02842 PF03099 Biotin/lipoate A/B protein ligase family PXO_02843 PF03309 Type III pantothenate kinase PXO_02846 PF02223 Thymidylate kinase PXO_02850 PF00491 Arginase family PXO_02853 PF05532 CsbD-like PXO_02854 PF00579 tRNA synthetases class I (W and Y) PXO_02855 PF00753 Metallo-beta-lactamase superfamily PXO_02860 PF00892 EamA-like transporter family PXO_02864 PF00199 Catalase PXO_02865 PF04542 Sigma-70 region 2 PXO_02865 PF08281 Sigma-70, region 4 PXO_02867 PF00883 Cytosol aminopeptidase family, catalytic domain PXO_02867 PF02789 Cytosol aminopeptidase family, N-terminal domain PXO_02869 PF01594 AI-2E family transporter PXO_02871 PF01040 UbiA prenyltransferase family PXO_02874 PF06968 Biotin and Thiamin Synthesis associated domain PXO_02874 PF04055 Radical SAM superfamily PXO_02875 PF00155 Aminotransferase class I and II PXO_02881 PF00535 Glycosyl transferase family 2 PXO_02883 PF00109 Beta-ketoacyl synthase, N-terminal domain PXO_02883 PF02801 Beta-ketoacyl synthase, C-terminal domain PXO_02884 PF05166 YcgL domain PXO_02887 PF00723 Glycosyl hydrolases family 15 PXO_02888 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain PXO_02888 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain PXO_02890 PF00999 Sodium/hydrogen exchanger family PXO_02890 PF02254 TrkA-N domain PXO_02891 PF03448 MgtE intracellular N domain PXO_02891 PF00571 CBS domain PXO_02891 PF01769 Divalent cation transporter PXO_02893 PF13607 Succinyl-CoA ligase like flavodoxin domain PXO_02893 PF00583 Acetyltransferase (GNAT) family PXO_02893 PF13380 CoA binding domain PXO_02897 PF02867 Ribonucleotide reductase, barrel domain PXO_02897 PF00317 Ribonucleotide reductase, all-alpha domain PXO_02897 PF03477 ATP cone domain PXO_02898 PF00268 Ribonucleotide reductase, small chain PXO_02901 PF01527 Transposase PXO_02904 PF01144 Coenzyme A transferase PXO_02905 PF02803 Thiolase, C-terminal domain PXO_02905 PF00108 Thiolase, N-terminal domain PXO_02906 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal PXO_02906 PF00775 Dioxygenase PXO_02908 PF00206 Lyase PXO_02908 PF10397 Adenylosuccinate lyase C-terminus PXO_02909 PF12146 Serine aminopeptidase, S33 PXO_02910 PF02627 Carboxymuconolactone decarboxylase family PXO_02912 PF01614 Bacterial transcriptional regulator PXO_02912 PF09339 IclR helix-turn-helix domain PXO_02914 PF00665 Integrase core domain PXO_02914 PF13936 Helix-turn-helix domain PXO_02915 PF00106 short chain dehydrogenase PXO_02918 PF03485 Arginyl tRNA synthetase N terminal domain PXO_02918 PF05746 DALR anticodon binding domain PXO_02918 PF00750 tRNA synthetases class I (R) PXO_02919 PF04002 RadC-like JAB domain PXO_02920 PF04127 DNA / pantothenate metabolism flavoprotein PXO_02920 PF02441 Flavoprotein PXO_02921 PF00692 dUTPase PXO_02922 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PXO_02922 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PXO_02922 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PXO_02922 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PXO_02925 PF00535 Glycosyl transferase family 2 PXO_02926 PF01370 NAD dependent epimerase/dehydratase family PXO_02929 PF17762 HTH domain found in ParB protein PXO_02929 PF02195 ParB-like nuclease domain PXO_02930 PF13614 AAA domain PXO_02932 PF00156 Phosphoribosyl transferase domain PXO_02934 PF03372 Endonuclease/Exonuclease/phosphatase family PXO_02935 PF07690 Major Facilitator Superfamily PXO_02937 PF03702 Anhydro-N-acetylmuramic acid kinase PXO_02939 PF04225 Opacity-associated protein A LysM-like domain PXO_02939 PF01551 Peptidase family M23 PXO_02940 PF00579 tRNA synthetases class I (W and Y) PXO_02941 PF13276 HTH-like domain PXO_02941 PF13683 Integrase core domain PXO_02942 PF01527 Transposase PXO_02943 PF00672 HAMP domain PXO_02943 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_02943 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PXO_02943 PF01627 Hpt domain PXO_02943 PF00072 Response regulator receiver domain PXO_02943 PF00512 His Kinase A (phospho-acceptor) domain PXO_02944 PF00072 Response regulator receiver domain PXO_02944 PF00486 Transcriptional regulatory protein, C terminal PXO_02949 PF01521 Iron-sulphur cluster biosynthesis PXO_02952 PF09297 NADH pyrophosphatase zinc ribbon domain PXO_02952 PF00293 NUDIX domain PXO_02952 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain PXO_02953 PF17113 Regulatory signalling modulator protein AmpE PXO_02953 PF03186 CobD/Cbib protein PXO_02956 PF07690 Major Facilitator Superfamily PXO_02961 PF12805 FUSC-like inner membrane protein yccS PXO_02964 PF02844 Phosphoribosylglycinamide synthetase, N domain PXO_02964 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PXO_02964 PF02843 Phosphoribosylglycinamide synthetase, C domain PXO_02965 PF02142 MGS-like domain PXO_02965 PF01808 AICARFT/IMPCHase bienzyme PXO_02969 PF12146 Serine aminopeptidase, S33 PXO_02969 PF12147 Putative methyltransferase PXO_02970 PF12146 Serine aminopeptidase, S33 PXO_02970 PF12147 Putative methyltransferase PXO_02972 PF00782 Dual specificity phosphatase, catalytic domain PXO_02973 PF00818 Ice nucleation protein repeat PXO_02975 PF17287 POTRA domain PXO_02975 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB PXO_02975 PF08479 POTRA domain, ShlB-type PXO_02976 PF13018 Extended Signal Peptide of Type V secretion system PXO_02976 PF13332 Hemagglutinin repeat PXO_02976 PF05860 haemagglutination activity domain PXO_02976 PF04829 Pre-toxin domain with VENN motif PXO_02977 PF05860 haemagglutination activity domain PXO_02977 PF15605 Bacterial toxin 28 PXO_02977 PF13332 Hemagglutinin repeat PXO_02977 PF04829 Pre-toxin domain with VENN motif PXO_02980 PF01527 Transposase PXO_02981 PF00665 Integrase core domain PXO_02981 PF13333 Integrase core domain PXO_02981 PF13276 HTH-like domain PXO_02982 PF01527 Transposase PXO_02983 PF05598 Transposase domain (DUF772) PXO_02983 PF01609 Transposase DDE domain PXO_02986 PF03412 Peptidase C39 family PXO_02986 PF00664 ABC transporter transmembrane region PXO_02986 PF00005 ABC transporter PXO_02989 PF01527 Transposase PXO_02990 PF00665 Integrase core domain PXO_02990 PF13276 HTH-like domain PXO_02990 PF13333 Integrase core domain PXO_02991 PF05860 haemagglutination activity domain PXO_02991 PF13332 Hemagglutinin repeat PXO_02991 PF04829 Pre-toxin domain with VENN motif PXO_02996 PF02954 Bacterial regulatory protein, Fis family PXO_02998 PF01381 Helix-turn-helix PXO_03004 PF02785 Biotin carboxylase C-terminal domain PXO_03004 PF00289 Biotin carboxylase, N-terminal domain PXO_03004 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PXO_03006 PF00364 Biotin-requiring enzyme PXO_03007 PF01220 Dehydroquinase class II PXO_03010 PF11412 Disulphide bond corrector protein DsbC PXO_03010 PF02683 Cytochrome C biogenesis protein transmembrane region PXO_03011 PF03091 CutA1 divalent ion tolerance protein PXO_03016 PF13936 Helix-turn-helix domain PXO_03016 PF00665 Integrase core domain PXO_03019 PF01654 Cytochrome bd terminal oxidase subunit I PXO_03020 PF00072 Response regulator receiver domain PXO_03020 PF00158 Sigma-54 interaction domain PXO_03020 PF02954 Bacterial regulatory protein, Fis family PXO_03023 PF01739 CheR methyltransferase, SAM binding domain PXO_03023 PF08448 PAS fold PXO_03023 PF03705 CheR methyltransferase, all-alpha domain PXO_03023 PF01339 CheB methylesterase PXO_03025 PF01527 Transposase PXO_03026 PF13276 HTH-like domain PXO_03032 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_03032 PF06580 Histidine kinase PXO_03032 PF00672 HAMP domain PXO_03032 PF02743 Cache domain PXO_03033 PF04397 LytTr DNA-binding domain PXO_03033 PF00072 Response regulator receiver domain PXO_03036 PF13520 Amino acid permease PXO_03039 PF01431 Peptidase family M13 PXO_03039 PF05649 Peptidase family M13 PXO_03042 PF00248 Aldo/keto reductase family PXO_03044 PF03358 NADPH-dependent FMN reductase PXO_03046 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase PXO_03048 PF03167 Uracil DNA glycosylase superfamily PXO_03050 PF02469 Fasciclin domain PXO_03053 PF00999 Sodium/hydrogen exchanger family PXO_03054 PF00005 ABC transporter PXO_03055 PF01061 ABC-2 type transporter PXO_03059 PF04151 Bacterial pre-peptidase C-terminal domain PXO_03059 PF00082 Subtilase family PXO_03063 PF00486 Transcriptional regulatory protein, C terminal PXO_03063 PF00072 Response regulator receiver domain PXO_03064 PF13188 PAS domain PXO_03064 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_03064 PF00072 Response regulator receiver domain PXO_03064 PF08448 PAS fold PXO_03064 PF00512 His Kinase A (phospho-acceptor) domain PXO_03067 PF00691 OmpA family PXO_03067 PF13677 Membrane MotB of proton-channel complex MotA/MotB PXO_03068 PF01618 MotA/TolQ/ExbB proton channel family PXO_03070 PF01641 SelR domain PXO_03072 PF01037 Lrp/AsnC ligand binding domain PXO_03073 PF01266 FAD dependent oxidoreductase PXO_03074 PF00842 Alanine racemase, C-terminal domain PXO_03074 PF01168 Alanine racemase, N-terminal domain PXO_03078 PF00512 His Kinase A (phospho-acceptor) domain PXO_03078 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_03078 PF00989 PAS fold PXO_03080 PF07995 Glucose / Sorbosone dehydrogenase PXO_03082 PF05175 Methyltransferase small domain PXO_03082 PF08468 Methyltransferase small domain N-terminal PXO_03083 PF00849 RNA pseudouridylate synthase PXO_03083 PF01479 S4 domain PXO_03084 PF13419 Haloacid dehalogenase-like hydrolase PXO_03091 PF04461 Protein of unknown function (DUF520) PXO_03092 PF00892 EamA-like transporter family PXO_03093 PF09383 NIL domain PXO_03093 PF00005 ABC transporter PXO_03094 PF00528 Binding-protein-dependent transport system inner membrane component PXO_03095 PF03180 NLPA lipoprotein PXO_03101 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PXO_03101 PF00364 Biotin-requiring enzyme PXO_03101 PF02817 e3 binding domain PXO_03103 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PXO_03103 PF07992 Pyridine nucleotide-disulphide oxidoreductase PXO_03107 PF00119 ATP synthase A chain PXO_03108 PF00137 ATP synthase subunit C PXO_03109 PF00430 ATP synthase B/B' CF(0) PXO_03110 PF00213 ATP synthase delta (OSCP) subunit PXO_03111 PF00306 ATP synthase alpha/beta chain, C terminal domain PXO_03111 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PXO_03111 PF02874 ATP synthase alpha/beta family, beta-barrel domain PXO_03112 PF00231 ATP synthase PXO_03113 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PXO_03113 PF02874 ATP synthase alpha/beta family, beta-barrel domain PXO_03114 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain PXO_03115 PF01817 Chorismate mutase type II PXO_03117 PF14602 Hexapeptide repeat of succinyl-transferase PXO_03117 PF12804 MobA-like NTP transferase domain PXO_03117 PF00132 Bacterial transferase hexapeptide (six repeats) PXO_03118 PF00672 HAMP domain PXO_03118 PF13426 PAS domain PXO_03118 PF00512 His Kinase A (phospho-acceptor) domain PXO_03118 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_03123 PF00005 ABC transporter PXO_03123 PF08402 TOBE domain PXO_03125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PXO_03126 PF01380 SIS domain PXO_03130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PXO_03131 PF05275 Copper resistance protein B precursor (CopB) PXO_03132 PF00394 Multicopper oxidase PXO_03132 PF07731 Multicopper oxidase PXO_03132 PF07732 Multicopper oxidase PXO_03135 PF01432 Peptidase family M3 PXO_03137 PF00109 Beta-ketoacyl synthase, N-terminal domain PXO_03137 PF02801 Beta-ketoacyl synthase, C-terminal domain PXO_03138 PF07977 FabA-like domain PXO_03139 PF11799 impB/mucB/samB family C-terminal domain PXO_03139 PF00817 impB/mucB/samB family PXO_03140 PF13419 Haloacid dehalogenase-like hydrolase PXO_03142 PF13185 GAF domain PXO_03145 PF01242 6-pyruvoyl tetrahydropterin synthase PXO_03147 PF00270 DEAD/DEAH box helicase PXO_03147 PF00271 Helicase conserved C-terminal domain PXO_03149 PF14497 Glutathione S-transferase, C-terminal domain PXO_03149 PF02798 Glutathione S-transferase, N-terminal domain PXO_03150 PF00437 Type II/IV secretion system protein PXO_03155 PF00571 CBS domain PXO_03155 PF00291 Pyridoxal-phosphate dependent enzyme PXO_03157 PF01053 Cys/Met metabolism PLP-dependent enzyme PXO_03160 PF01370 NAD dependent epimerase/dehydratase family PXO_03164 PF00872 Transposase, Mutator family PXO_03166 PF00005 ABC transporter PXO_03167 PF01012 Electron transfer flavoprotein domain PXO_03167 PF00766 Electron transfer flavoprotein FAD-binding domain PXO_03168 PF01012 Electron transfer flavoprotein domain PXO_03169 PF16363 GDP-mannose 4,6 dehydratase PXO_03170 PF00483 Nucleotidyl transferase PXO_03171 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase PXO_03172 PF04321 RmlD substrate binding domain PXO_03173 PF01050 Mannose-6-phosphate isomerase PXO_03173 PF00483 Nucleotidyl transferase PXO_03174 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PXO_03174 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PXO_03174 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PXO_03174 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PXO_03175 PF01144 Coenzyme A transferase PXO_03176 PF01144 Coenzyme A transferase PXO_03177 PF14307 Glycosyltransferase WbsX PXO_03177 PF05045 Rhamnan synthesis protein F PXO_03181 PF03886 ABC-type transport auxiliary lipoprotein component PXO_03181 PF02470 MlaD protein PXO_03182 PF00005 ABC transporter PXO_03183 PF02405 Permease MlaE PXO_03185 PF00816 H-NS histone family PXO_03186 PF04073 Aminoacyl-tRNA editing domain PXO_03186 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PXO_03186 PF03129 Anticodon binding domain PXO_03188 PF01066 CDP-alcohol phosphatidyltransferase PXO_03194 PF01609 Transposase DDE domain PXO_03194 PF05598 Transposase domain (DUF772) PXO_03197 PF01527 Transposase PXO_03200 PF06827 Zinc finger found in FPG and IleRS PXO_03200 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain PXO_03200 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain PXO_03204 PF05598 Transposase domain (DUF772) PXO_03206 PF04333 MlaA lipoprotein PXO_03208 PF05494 MlaC protein PXO_03209 PF02470 MlaD protein PXO_03210 PF02405 Permease MlaE PXO_03211 PF00005 ABC transporter PXO_03221 PF05598 Transposase domain (DUF772) PXO_03223 PF00255 Glutathione peroxidase PXO_03225 PF02646 RmuC family PXO_03227 PF13520 Amino acid permease PXO_03230 PF13361 UvrD-like helicase C-terminal domain PXO_03230 PF00580 UvrD/REP helicase N-terminal domain PXO_03233 PF13396 Phospholipase_D-nuclease N-terminal PXO_03233 PF13091 PLD-like domain PXO_03234 PF03466 LysR substrate binding domain PXO_03234 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PXO_03235 PF03737 Aldolase/RraA PXO_03236 PF04303 PrpF protein PXO_03238 PF04909 Amidohydrolase PXO_03239 PF00471 Ribosomal protein L33 PXO_03240 PF00830 Ribosomal L28 family PXO_03243 PF02527 rRNA small subunit methyltransferase G PXO_03244 PF16655 PhoD-like phosphatase, N-terminal domain PXO_03244 PF09423 PhoD-like phosphatase PXO_03245 PF16655 PhoD-like phosphatase, N-terminal domain PXO_03245 PF09423 PhoD-like phosphatase PXO_03246 PF01648 4'-phosphopantetheinyl transferase superfamily PXO_03247 PF04226 Transglycosylase associated protein PXO_03249 PF03372 Endonuclease/Exonuclease/phosphatase family PXO_03252 PF00474 Sodium:solute symporter family PXO_03253 PF04341 Protein of unknown function, DUF485 PXO_03257 PF16177 Acetyl-coenzyme A synthetase N-terminus PXO_03257 PF00501 AMP-binding enzyme PXO_03257 PF13193 AMP-binding enzyme C-terminal domain PXO_03258 PF00196 Bacterial regulatory proteins, luxR family PXO_03258 PF00072 Response regulator receiver domain PXO_03261 PF04616 Glycosyl hydrolases family 43 PXO_03261 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain PXO_03262 PF00248 Aldo/keto reductase family PXO_03265 PF01557 Fumarylacetoacetate (FAA) hydrolase family PXO_03266 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PXO_03266 PF13378 Enolase C-terminal domain-like PXO_03268 PF07308 Protein of unknown function (DUF1456) PXO_03270 PF08482 ATP-dependent helicase C-terminal PXO_03270 PF00271 Helicase conserved C-terminal domain PXO_03270 PF04408 Helicase associated domain (HA2) PXO_03270 PF00270 DEAD/DEAH box helicase PXO_03272 PF00849 RNA pseudouridylate synthase PXO_03274 PF00248 Aldo/keto reductase family PXO_03275 PF00107 Zinc-binding dehydrogenase PXO_03275 PF16884 N-terminal domain of oxidoreductase PXO_03276 PF00248 Aldo/keto reductase family PXO_03279 PF01527 Transposase PXO_03280 PF13276 HTH-like domain PXO_03283 PF00657 GDSL-like Lipase/Acylhydrolase PXO_03285 PF00351 Biopterin-dependent aromatic amino acid hydroxylase PXO_03286 PF01037 Lrp/AsnC ligand binding domain PXO_03288 PF07715 TonB-dependent Receptor Plug Domain PXO_03288 PF00593 TonB dependent receptor PXO_03290 PF00593 TonB dependent receptor PXO_03290 PF07715 TonB-dependent Receptor Plug Domain PXO_03291 PF05598 Transposase domain (DUF772) PXO_03296 PF08240 Alcohol dehydrogenase GroES-like domain PXO_03296 PF00107 Zinc-binding dehydrogenase PXO_03298 PF00150 Cellulase (glycosyl hydrolase family 5) PXO_03299 PF00150 Cellulase (glycosyl hydrolase family 5) PXO_03301 PF00150 Cellulase (glycosyl hydrolase family 5) PXO_03302 PF13936 Helix-turn-helix domain PXO_03302 PF00665 Integrase core domain PXO_03304 PF02810 SEC-C motif PXO_03307 PF01263 Aldose 1-epimerase PXO_03308 PF07690 Major Facilitator Superfamily PXO_03309 PF01126 Heme oxygenase PXO_03310 PF01590 GAF domain PXO_03310 PF00360 Phytochrome region PXO_03310 PF13426 PAS domain PXO_03310 PF08446 PAS fold PXO_03311 PF03594 Benzoate membrane transport protein PXO_03312 PF03594 Benzoate membrane transport protein PXO_03314 PF13936 Helix-turn-helix domain PXO_03314 PF00665 Integrase core domain PXO_03318 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PXO_03318 PF07992 Pyridine nucleotide-disulphide oxidoreductase PXO_03319 PF01493 GXGXG motif PXO_03319 PF01645 Conserved region in glutamate synthase PXO_03319 PF04898 Glutamate synthase central domain PXO_03319 PF00310 Glutamine amidotransferases class-II PXO_03333 PF00271 Helicase conserved C-terminal domain PXO_03333 PF09369 Domain of unknown function (DUF1998) PXO_03333 PF00270 DEAD/DEAH box helicase PXO_03334 PF03006 Haemolysin-III related PXO_03337 PF08845 Toxin SymE, type I toxin-antitoxin system PXO_03339 PF00665 Integrase core domain PXO_03339 PF13936 Helix-turn-helix domain PXO_03342 PF00005 ABC transporter PXO_03344 PF13533 Biotin-lipoyl like PXO_03350 PF05598 Transposase domain (DUF772) PXO_03352 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PXO_03352 PF00364 Biotin-requiring enzyme PXO_03357 PF01609 Transposase DDE domain PXO_03357 PF05598 Transposase domain (DUF772) PXO_03359 PF00270 DEAD/DEAH box helicase PXO_03359 PF00271 Helicase conserved C-terminal domain PXO_03361 PF06903 VirK protein PXO_03370 PF13460 NAD(P)H-binding PXO_03371 PF00128 Alpha amylase, catalytic domain PXO_03371 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PXO_03372 PF00128 Alpha amylase, catalytic domain PXO_03373 PF02446 4-alpha-glucanotransferase PXO_03374 PF11941 Domain of unknown function (DUF3459) PXO_03374 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PXO_03374 PF00128 Alpha amylase, catalytic domain PXO_03375 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PXO_03375 PF00128 Alpha amylase, catalytic domain PXO_03375 PF02806 Alpha amylase, C-terminal all-beta domain PXO_03376 PF08323 Starch synthase catalytic domain PXO_03376 PF00534 Glycosyl transferases group 1 PXO_03378 PF00072 Response regulator receiver domain PXO_03378 PF00990 Diguanylate cyclase, GGDEF domain PXO_03380 PF05661 Protein of unknown function (DUF808) PXO_03381 PF03109 ABC1 family PXO_03384 PF12794 Mechanosensitive ion channel inner membrane domain 1 PXO_03384 PF00924 Mechanosensitive ion channel PXO_03384 PF12795 Mechanosensitive ion channel porin domain PXO_03391 PF01464 Transglycosylase SLT domain PXO_03394 PF01311 Bacterial export proteins, family 1 PXO_03396 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PXO_03396 PF02874 ATP synthase alpha/beta family, beta-barrel domain PXO_03396 PF18269 T3SS EscN ATPase C-terminal domain PXO_03399 PF01514 Secretory protein of YscJ/FliF family PXO_03402 PF01312 FlhB HrpN YscU SpaS Family PXO_03403 PF00771 FHIPEP family PXO_03406 PF00813 FliP family PXO_03407 PF01313 Bacterial export proteins, family 3 PXO_03417 PF05819 NolX protein PXO_03424 PF00595 PDZ domain PXO_03426 PF08338 Domain of unknown function (DUF1731) PXO_03426 PF01370 NAD dependent epimerase/dehydratase family PXO_03428 PF05598 Transposase domain (DUF772) PXO_03428 PF01609 Transposase DDE domain PXO_03433 PF13936 Helix-turn-helix domain PXO_03433 PF00665 Integrase core domain PXO_03436 PF16485 Protealysin propeptide PXO_03436 PF02868 Thermolysin metallopeptidase, alpha-helical domain PXO_03436 PF01447 Thermolysin metallopeptidase, catalytic domain PXO_03438 PF13344 Haloacid dehalogenase-like hydrolase PXO_03438 PF00293 NUDIX domain PXO_03443 PF00083 Sugar (and other) transporter PXO_03443 PF08946 Osmosensory transporter coiled coil PXO_03444 PF07690 Major Facilitator Superfamily PXO_03449 PF01609 Transposase DDE domain PXO_03449 PF05598 Transposase domain (DUF772) PXO_03455 PF00294 pfkB family carbohydrate kinase PXO_03458 PF12241 Trans-2-enoyl-CoA reductase catalytic region PXO_03458 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase PXO_03458 PF07055 Enoyl reductase FAD binding domain PXO_03462 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family PXO_03463 PF01070 FMN-dependent dehydrogenase PXO_03464 PF05598 Transposase domain (DUF772) PXO_03464 PF01609 Transposase DDE domain PXO_03467 PF00593 TonB dependent receptor PXO_03467 PF07715 TonB-dependent Receptor Plug Domain PXO_03468 PF00155 Aminotransferase class I and II PXO_03469 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain PXO_03470 PF13091 PLD-like domain PXO_03470 PF13396 Phospholipase_D-nuclease N-terminal PXO_03472 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ PXO_03473 PF02472 Biopolymer transport protein ExbD/TolR PXO_03474 PF02472 Biopolymer transport protein ExbD/TolR PXO_03475 PF01618 MotA/TolQ/ExbB proton channel family PXO_03476 PF03544 Gram-negative bacterial TonB protein C-terminal PXO_03478 PF01435 Peptidase family M48 PXO_03480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_03480 PF00986 DNA gyrase B subunit, carboxyl terminus PXO_03480 PF01751 Toprim domain PXO_03480 PF00204 DNA gyrase B PXO_03480 PF18053 DNA gyrase B subunit insert domain PXO_03481 PF02463 RecF/RecN/SMC N terminal domain PXO_03482 PF02768 DNA polymerase III beta subunit, C-terminal domain PXO_03482 PF02767 DNA polymerase III beta subunit, central domain PXO_03482 PF00712 DNA polymerase III beta subunit, N-terminal domain PXO_03483 PF00308 Bacterial dnaA protein PXO_03483 PF08299 Bacterial dnaA protein helix-turn-helix PXO_03483 PF11638 DnaA N-terminal domain PXO_03485 PF00468 Ribosomal protein L34 PXO_03486 PF00825 Ribonuclease P PXO_03487 PF14849 YidC periplasmic domain PXO_03487 PF02096 60Kd inner membrane protein PXO_03488 PF01522 Polysaccharide deacetylase PXO_03489 PF12631 MnmE helical domain PXO_03489 PF01926 50S ribosome-binding GTPase PXO_03489 PF10396 GTP-binding protein TrmE N-terminus PXO_03490 PF01569 PAP2 superfamily PXO_03494 PF03009 Glycerophosphoryl diester phosphodiesterase family PXO_03495 PF01694 Rhomboid family PXO_03496 PF03741 Integral membrane protein TerC family PXO_03498 PF10672 S-adenosylmethionine-dependent methyltransferase PXO_03498 PF17785 PUA-like domain PXO_03502 PF07690 Major Facilitator Superfamily PXO_03503 PF02595 Glycerate kinase family PXO_03504 PF13556 PucR C-terminal helix-turn-helix domain PXO_03504 PF07905 Purine catabolism regulatory protein-like family PXO_03506 PF05532 CsbD-like PXO_03512 PF05598 Transposase domain (DUF772) PXO_03521 PF05598 Transposase domain (DUF772) PXO_03531 PF00083 Sugar (and other) transporter PXO_03535 PF01227 GTP cyclohydrolase I PXO_03536 PF02463 RecF/RecN/SMC N terminal domain PXO_03541 PF05598 Transposase domain (DUF772) PXO_03544 PF04389 Peptidase family M28 PXO_03546 PF01551 Peptidase family M23 PXO_03547 PF13180 PDZ domain PXO_03547 PF03572 Peptidase family S41 PXO_03548 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PXO_03548 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PXO_03551 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) PXO_03561 PF00080 Copper/zinc superoxide dismutase (SODC) PXO_03563 PF00080 Copper/zinc superoxide dismutase (SODC) PXO_03564 PF02954 Bacterial regulatory protein, Fis family PXO_03564 PF00072 Response regulator receiver domain PXO_03564 PF00158 Sigma-54 interaction domain PXO_03565 PF00989 PAS fold PXO_03565 PF00512 His Kinase A (phospho-acceptor) domain PXO_03565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_03566 PF00909 Ammonium Transporter Family PXO_03567 PF00543 Nitrogen regulatory protein P-II PXO_03568 PF03951 Glutamine synthetase, beta-Grasp domain PXO_03568 PF00120 Glutamine synthetase, catalytic domain PXO_03569 PF02673 Bacitracin resistance protein BacA PXO_03576 PF03061 Thioesterase superfamily PXO_03577 PF13091 PLD-like domain PXO_03580 PF01883 Iron-sulfur cluster assembly protein PXO_03580 PF10609 NUBPL iron-transfer P-loop NTPase PXO_03585 PF01381 Helix-turn-helix PXO_03586 PF13657 HipA N-terminal domain PXO_03586 PF07804 HipA-like C-terminal domain PXO_03587 PF10017 Histidine-specific methyltransferase, SAM-dependent PXO_03588 PF03781 Sulfatase-modifying factor enzyme 1 PXO_03588 PF12867 DinB superfamily PXO_03590 PF00528 Binding-protein-dependent transport system inner membrane component PXO_03591 PF00571 CBS domain PXO_03591 PF00005 ABC transporter PXO_03594 PF00005 ABC transporter PXO_03596 PF01734 Patatin-like phospholipase PXO_03599 PF05598 Transposase domain (DUF772) PXO_03601 PF13276 HTH-like domain PXO_03601 PF13683 Integrase core domain PXO_03602 PF01527 Transposase PXO_03606 PF16197 Ketoacyl-synthetase C-terminal extension PXO_03606 PF00109 Beta-ketoacyl synthase, N-terminal domain PXO_03606 PF08240 Alcohol dehydrogenase GroES-like domain PXO_03606 PF02801 Beta-ketoacyl synthase, C-terminal domain PXO_03606 PF08659 KR domain PXO_03606 PF00698 Acyl transferase domain PXO_03606 PF00550 Phosphopantetheine attachment site PXO_03606 PF14765 Polyketide synthase dehydratase PXO_03607 PF01553 Acyltransferase PXO_03609 PF00356 Bacterial regulatory proteins, lacI family PXO_03613 PF04820 Tryptophan halogenase PXO_03614 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family PXO_03615 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) PXO_03616 PF04337 Protein of unknown function, DUF480 PXO_03620 PF00580 UvrD/REP helicase N-terminal domain PXO_03620 PF13361 UvrD-like helicase C-terminal domain PXO_03622 PF00265 Thymidine kinase PXO_03624 PF04349 Periplasmic glucan biosynthesis protein, MdoG PXO_03626 PF13276 HTH-like domain PXO_03626 PF13683 Integrase core domain PXO_03628 PF12697 Alpha/beta hydrolase family PXO_03630 PF13649 Methyltransferase domain PXO_03634 PF13291 ACT domain PXO_03634 PF00291 Pyridoxal-phosphate dependent enzyme PXO_03636 PF13932 GidA associated domain PXO_03636 PF01134 Glucose inhibited division protein A PXO_03644 PF04717 Type VI secretion system, phage-baseplate injector PXO_03644 PF16671 Actin cross-linking domain PXO_03646 PF05598 Transposase domain (DUF772) PXO_03648 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PXO_03648 PF17810 Arginine decarboxylase helical bundle domain PXO_03648 PF17944 Arginine decarboxylase C-terminal helical extension PXO_03650 PF17284 Spermidine synthase tetramerisation domain PXO_03655 PF00543 Nitrogen regulatory protein P-II PXO_03656 PF04380 Membrane fusogenic activity PXO_03657 PF13335 Magnesium chelatase, subunit ChlI C-terminal PXO_03657 PF01078 Magnesium chelatase, subunit ChlI PXO_03660 PF05598 Transposase domain (DUF772) PXO_03663 PF00872 Transposase, Mutator family PXO_03667 PF11896 Domain of unknown function (DUF3416) PXO_03667 PF00128 Alpha amylase, catalytic domain PXO_03668 PF00128 Alpha amylase, catalytic domain PXO_03668 PF16657 Maltogenic Amylase, C-terminal domain PXO_03669 PF02806 Alpha amylase, C-terminal all-beta domain PXO_03669 PF00128 Alpha amylase, catalytic domain PXO_03669 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PXO_03674 PF00356 Bacterial regulatory proteins, lacI family PXO_03675 PF04962 KduI/IolB family PXO_03676 PF04962 KduI/IolB family PXO_03677 PF05598 Transposase domain (DUF772) PXO_03686 PF08335 GlnD PII-uridylyltransferase PXO_03686 PF03710 Glutamate-ammonia ligase adenylyltransferase PXO_03689 PF08450 SMP-30/Gluconolactonase/LRE-like region PXO_03699 PF00793 DAHP synthetase I family PXO_03701 PF07715 TonB-dependent Receptor Plug Domain PXO_03701 PF00593 TonB dependent receptor PXO_03703 PF00118 TCP-1/cpn60 chaperonin family PXO_03704 PF00166 Chaperonin 10 Kd subunit PXO_03709 PF07992 Pyridine nucleotide-disulphide oxidoreductase PXO_03710 PF03458 UPF0126 domain PXO_03711 PF04545 Sigma-70, region 4 PXO_03711 PF04542 Sigma-70 region 2 PXO_03712 PF03167 Uracil DNA glycosylase superfamily PXO_03713 PF00072 Response regulator receiver domain PXO_03713 PF01339 CheB methylesterase PXO_03714 PF18075 FtsX extracellular domain PXO_03715 PF00005 ABC transporter PXO_03716 PF00270 DEAD/DEAH box helicase PXO_03716 PF12300 ATP-dependent RNA helicase RhlB PXO_03716 PF00271 Helicase conserved C-terminal domain PXO_03717 PF00085 Thioredoxin PXO_03719 PF07497 Rho termination factor, RNA-binding domain PXO_03719 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PXO_03719 PF07498 Rho termination factor, N-terminal domain PXO_03720 PF13683 Integrase core domain PXO_03720 PF13276 HTH-like domain PXO_03724 PF17243 POTRA domain TamA domain 1 PXO_03724 PF01103 Surface antigen PXO_03725 PF04357 TamB, inner membrane protein subunit of TAM complex PXO_03734 PF07977 FabA-like domain PXO_03735 PF01553 Acyltransferase PXO_03737 PF00550 Phosphopantetheine attachment site PXO_03738 PF04820 Tryptophan halogenase PXO_03748 PF01638 HxlR-like helix-turn-helix PXO_03749 PF05368 NmrA-like family PXO_03754 PF03812 2-keto-3-deoxygluconate permease PXO_03755 PF01717 Cobalamin-independent synthase, Catalytic domain PXO_03755 PF08267 Cobalamin-independent synthase, N-terminal domain PXO_03758 PF03358 NADPH-dependent FMN reductase PXO_03759 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PXO_03759 PF03466 LysR substrate binding domain PXO_03760 PF02677 Epoxyqueuosine reductase QueH PXO_03762 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_03762 PF00512 His Kinase A (phospho-acceptor) domain PXO_03762 PF00672 HAMP domain PXO_03763 PF00512 His Kinase A (phospho-acceptor) domain PXO_03763 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_03763 PF00672 HAMP domain PXO_03764 PF00486 Transcriptional regulatory protein, C terminal PXO_03764 PF00072 Response regulator receiver domain PXO_03765 PF00551 Formyl transferase PXO_03767 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PXO_03767 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PXO_03768 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PXO_03769 PF02146 Sir2 family PXO_03772 PF07690 Major Facilitator Superfamily PXO_03773 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PXO_03773 PF03466 LysR substrate binding domain PXO_03776 PF01026 TatD related DNase PXO_03786 PF00266 Aminotransferase class-V PXO_03789 PF09349 OHCU decarboxylase PXO_03789 PF01014 Uricase PXO_03790 PF13454 FAD-NAD(P)-binding PXO_03797 PF13276 HTH-like domain PXO_03801 PF00665 Integrase core domain PXO_03801 PF13936 Helix-turn-helix domain PXO_03802 PF00326 Prolyl oligopeptidase family PXO_03803 PF02785 Biotin carboxylase C-terminal domain PXO_03803 PF00289 Biotin carboxylase, N-terminal domain PXO_03803 PF00364 Biotin-requiring enzyme PXO_03803 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PXO_03804 PF01039 Carboxyl transferase domain PXO_03805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PXO_03805 PF02770 Acyl-CoA dehydrogenase, middle domain PXO_03805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PXO_03818 PF02492 CobW/HypB/UreG, nucleotide-binding domain PXO_03818 PF07683 Cobalamin synthesis protein cobW C-terminal domain PXO_03824 PF03969 AFG1-like ATPase PXO_03825 PF03412 Peptidase C39 family PXO_03825 PF00005 ABC transporter PXO_03825 PF00664 ABC transporter transmembrane region PXO_03827 PF07715 TonB-dependent Receptor Plug Domain PXO_03827 PF00593 TonB dependent receptor PXO_03828 PF13181 Tetratricopeptide repeat PXO_03829 PF02092 Glycyl-tRNA synthetase beta subunit PXO_03829 PF05746 DALR anticodon binding domain PXO_03831 PF02091 Glycyl-tRNA synthetase alpha subunit PXO_03832 PF00437 Type II/IV secretion system protein PXO_03832 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain PXO_03836 PF00117 Glutamine amidotransferase class-I PXO_03836 PF00958 GMP synthase C terminal domain PXO_03838 PF00902 Sec-independent protein translocase protein (TatC) PXO_03839 PF02416 mttA/Hcf106 family PXO_03840 PF02416 mttA/Hcf106 family PXO_03842 PF00762 Ferrochelatase PXO_03843 PF12697 Alpha/beta hydrolase family PXO_03845 PF04381 Putative exonuclease, RdgC PXO_03846 PF01171 PP-loop family PXO_03849 PF00356 Bacterial regulatory proteins, lacI family PXO_03852 PF03648 Glycosyl hydrolase family 67 N-terminus PXO_03852 PF07488 Glycosyl hydrolase family 67 middle domain PXO_03852 PF07477 Glycosyl hydrolase family 67 C-terminus PXO_03854 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PXO_03854 PF13378 Enolase C-terminal domain-like PXO_03855 PF04616 Glycosyl hydrolases family 43 PXO_03855 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain PXO_03856 PF07691 PA14 domain PXO_03856 PF01915 Glycosyl hydrolase family 3 C-terminal domain PXO_03856 PF00933 Glycosyl hydrolase family 3 N terminal domain PXO_03856 PF14310 Fibronectin type III-like domain PXO_03857 PF08125 Mannitol dehydrogenase C-terminal domain PXO_03857 PF01232 Mannitol dehydrogenase Rossmann domain PXO_03860 PF02614 Glucuronate isomerase PXO_03861 PF00553 Cellulose binding domain PXO_03861 PF00331 Glycosyl hydrolase family 10 PXO_03861 PF03422 Carbohydrate binding module (family 6) PXO_03863 PF03422 Carbohydrate binding module (family 6) PXO_03863 PF00331 Glycosyl hydrolase family 10 PXO_03863 PF00553 Cellulose binding domain PXO_03869 PF04616 Glycosyl hydrolases family 43 PXO_03877 PF00563 EAL domain PXO_03877 PF12792 CSS motif domain associated with EAL PXO_03878 PF00487 Fatty acid desaturase PXO_03879 PF00970 Oxidoreductase FAD-binding domain PXO_03879 PF00175 Oxidoreductase NAD-binding domain PXO_03879 PF00111 2Fe-2S iron-sulfur cluster binding domain PXO_03880 PF00440 Bacterial regulatory proteins, tetR family PXO_03887 PF01047 MarR family PXO_03888 PF02566 OsmC-like protein PXO_03903 PF01381 Helix-turn-helix PXO_03904 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB PXO_03905 PF13538 UvrD-like helicase C-terminal domain PXO_03906 PF00580 UvrD/REP helicase N-terminal domain PXO_03906 PF12705 PD-(D/E)XK nuclease superfamily PXO_03906 PF13361 UvrD-like helicase C-terminal domain PXO_03909 PF00881 Nitroreductase family PXO_03910 PF04264 YceI-like domain PXO_03920 PF00665 Integrase core domain PXO_03920 PF13276 HTH-like domain PXO_03920 PF13333 Integrase core domain PXO_03921 PF05598 Transposase domain (DUF772) PXO_03922 PF03377 TAL effector repeat PXO_03930 PF00456 Transketolase, thiamine diphosphate binding domain PXO_03930 PF17831 Pyruvate dehydrogenase E1 component middle domain PXO_03931 PF01527 Transposase PXO_03932 PF13683 Integrase core domain PXO_03932 PF13276 HTH-like domain PXO_03934 PF00476 DNA polymerase family A PXO_03934 PF01612 3'-5' exonuclease PXO_03934 PF01367 5'-3' exonuclease, C-terminal SAM fold PXO_03934 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain PXO_03935 PF01218 Coproporphyrinogen III oxidase PXO_03937 PF05598 Transposase domain (DUF772) PXO_03937 PF01609 Transposase DDE domain PXO_03939 PF05598 Transposase domain (DUF772) PXO_03940 PF13495 Phage integrase, N-terminal SAM-like domain PXO_03940 PF00589 Phage integrase family PXO_03941 PF00920 Dehydratase family PXO_03942 PF03692 Putative zinc- or iron-chelating domain PXO_03943 PF00132 Bacterial transferase hexapeptide (six repeats) PXO_03944 PF07690 Major Facilitator Superfamily PXO_03945 PF11871 Domain of unknown function (DUF3391) PXO_03945 PF01966 HD domain PXO_03947 PF05598 Transposase domain (DUF772) PXO_03949 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family PXO_03950 PF00501 AMP-binding enzyme PXO_03952 PF03692 Putative zinc- or iron-chelating domain PXO_03953 PF00561 alpha/beta hydrolase fold PXO_03955 PF01555 DNA methylase PXO_03956 PF02661 Fic/DOC family PXO_03956 PF13784 Fic/DOC family N-terminal PXO_03957 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PXO_03957 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PXO_03960 PF00588 SpoU rRNA Methylase family PXO_03962 PF07690 Major Facilitator Superfamily PXO_03965 PF00072 Response regulator receiver domain PXO_03965 PF02954 Bacterial regulatory protein, Fis family PXO_03965 PF00158 Sigma-54 interaction domain PXO_03966 PF00512 His Kinase A (phospho-acceptor) domain PXO_03966 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_03967 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PXO_03967 PF00205 Thiamine pyrophosphate enzyme, central domain PXO_03967 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PXO_03969 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PXO_03969 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus PXO_03970 PF02556 Preprotein translocase subunit SecB PXO_03971 PF00581 Rhodanese-like domain PXO_03979 PF07063 Domain of unknown function (DUF1338) PXO_03980 PF00873 AcrB/AcrD/AcrF family PXO_03981 PF00873 AcrB/AcrD/AcrF family PXO_03982 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PXO_03984 PF01546 Peptidase family M20/M25/M40 PXO_03984 PF07687 Peptidase dimerisation domain PXO_03986 PF14489 QueF-like protein PXO_03986 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term PXO_03988 PF00872 Transposase, Mutator family PXO_03992 PF05598 Transposase domain (DUF772) PXO_03994 PF03971 Monomeric isocitrate dehydrogenase PXO_03997 PF13276 HTH-like domain PXO_03997 PF13683 Integrase core domain PXO_03998 PF01527 Transposase PXO_04000 PF00117 Glutamine amidotransferase class-I PXO_04003 PF02885 Glycosyl transferase family, helical bundle domain PXO_04003 PF00591 Glycosyl transferase family, a/b domain PXO_04004 PF00218 Indole-3-glycerol phosphate synthase PXO_04006 PF00027 Cyclic nucleotide-binding domain PXO_04006 PF00325 Bacterial regulatory proteins, crp family PXO_04007 PF02675 S-adenosylmethionine decarboxylase PXO_04008 PF00893 Small Multidrug Resistance protein PXO_04009 PF03232 Ubiquinone biosynthesis protein COQ7 PXO_04010 PF00572 Ribosomal protein L13 PXO_04011 PF00380 Ribosomal protein S9/S16 PXO_04012 PF00293 NUDIX domain PXO_04013 PF00210 Ferritin-like domain PXO_04016 PF01527 Transposase PXO_04017 PF00171 Aldehyde dehydrogenase family PXO_04017 PF01619 Proline dehydrogenase PXO_04017 PF14850 DNA-binding domain of Proline dehydrogenase PXO_04017 PF18327 Proline utilization A proline dehydrogenase N-terminal domain PXO_04019 PF00116 Cytochrome C oxidase subunit II, periplasmic domain PXO_04019 PF02790 Cytochrome C oxidase subunit II, transmembrane domain PXO_04020 PF00115 Cytochrome C and Quinol oxidase polypeptide I PXO_04022 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 PXO_04023 PF00510 Cytochrome c oxidase subunit III PXO_04028 PF01040 UbiA prenyltransferase family PXO_04030 PF13593 SBF-like CPA transporter family (DUF4137) PXO_04034 PF05598 Transposase domain (DUF772) PXO_04034 PF01609 Transposase DDE domain PXO_04038 PF00270 DEAD/DEAH box helicase PXO_04038 PF18074 Primosomal protein N C-terminal domain PXO_04038 PF17764 3′ DNA-binding domain (3′BD) PXO_04038 PF00271 Helicase conserved C-terminal domain PXO_04038 PF18319 PriA DNA helicase Cys-rich region (CRR) domain PXO_04042 PF01554 MatE PXO_04043 PF01343 Peptidase family S49 PXO_04048 PF01300 Telomere recombination PXO_04049 PF01751 Toprim domain PXO_04049 PF01131 DNA topoisomerase PXO_04049 PF13368 Topoisomerase C-terminal repeat PXO_04051 PF07963 Prokaryotic N-terminal methylation motif PXO_04051 PF00114 Pilin (bacterial filament) PXO_04052 PF04361 Protein of unknown function (DUF494) PXO_04053 PF02481 DNA recombination-mediator protein A PXO_04053 PF17782 DprA winged helix domain PXO_04054 PF01476 LysM domain PXO_04055 PF01327 Polypeptide deformylase PXO_04056 PF02911 Formyl transferase, C-terminal domain PXO_04056 PF00551 Formyl transferase PXO_04057 PF01189 16S rRNA methyltransferase RsmB/F PXO_04057 PF01029 NusB family PXO_04060 PF00535 Glycosyl transferase family 2 PXO_04065 PF00925 GTP cyclohydrolase II PXO_04067 PF03279 Bacterial lipid A biosynthesis acyltransferase PXO_04068 PF02580 D-Tyr-tRNA(Tyr) deacylase PXO_04069 PF03979 Sigma-70 factor, region 1.1 PXO_04069 PF04545 Sigma-70, region 4 PXO_04069 PF00140 Sigma-70 factor, region 1.2 PXO_04069 PF04542 Sigma-70 region 2 PXO_04069 PF04539 Sigma-70 region 3 PXO_04069 PF04546 Sigma-70, non-essential region PXO_04077 PF13276 HTH-like domain PXO_04082 PF00665 Integrase core domain PXO_04082 PF13936 Helix-turn-helix domain PXO_04085 PF00005 ABC transporter PXO_04088 PF07715 TonB-dependent Receptor Plug Domain PXO_04088 PF00593 TonB dependent receptor PXO_04097 PF10410 DnaB-helicase binding domain of primase PXO_04097 PF08278 DNA primase DnaG DnaB-binding PXO_04097 PF01807 CHC2 zinc finger PXO_04097 PF08275 DNA primase catalytic core, N-terminal domain PXO_04098 PF03631 Virulence factor BrkB PXO_04100 PF09424 Yqey-like protein PXO_04101 PF01165 Ribosomal protein S21 PXO_04102 PF00814 Glycoprotease family PXO_04103 PF02152 Dihydroneopterin aldolase PXO_04104 PF01915 Glycosyl hydrolase family 3 C-terminal domain PXO_04104 PF14310 Fibronectin type III-like domain PXO_04104 PF00933 Glycosyl hydrolase family 3 N terminal domain PXO_04105 PF00665 Integrase core domain PXO_04105 PF13936 Helix-turn-helix domain PXO_04111 PF07995 Glucose / Sorbosone dehydrogenase PXO_04112 PF05360 yiaA/B two helix domain PXO_04118 PF13520 Amino acid permease PXO_04122 PF00589 Phage integrase family PXO_04122 PF02899 Phage integrase, N-terminal SAM-like domain PXO_04124 PF01678 Diaminopimelate epimerase PXO_04127 PF00326 Prolyl oligopeptidase family PXO_04127 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain PXO_04129 PF00155 Aminotransferase class I and II PXO_04132 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain PXO_04132 PF00326 Prolyl oligopeptidase family PXO_04137 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain PXO_04137 PF03900 Porphobilinogen deaminase, C-terminal domain PXO_04138 PF00072 Response regulator receiver domain PXO_04138 PF04397 LytTr DNA-binding domain PXO_04139 PF07694 5TMR of 5TMR-LYT PXO_04139 PF06580 Histidine kinase PXO_04141 PF13632 Glycosyl transferase family group 2 PXO_04143 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_04147 PF08448 PAS fold PXO_04147 PF00990 Diguanylate cyclase, GGDEF domain PXO_04150 PF01740 STAS domain PXO_04150 PF00916 Sulfate permease family PXO_04151 PF00150 Cellulase (glycosyl hydrolase family 5) PXO_04151 PF00553 Cellulose binding domain PXO_04153 PF02203 Tar ligand binding domain homologue PXO_04153 PF00672 HAMP domain PXO_04153 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PXO_04155 PF03707 Bacterial signalling protein N terminal repeat PXO_04155 PF00563 EAL domain PXO_04155 PF00990 Diguanylate cyclase, GGDEF domain PXO_04165 PF01204 Trehalase PXO_04167 PF05598 Transposase domain (DUF772) PXO_04167 PF01609 Transposase DDE domain PXO_04171 PF01544 CorA-like Mg2+ transporter protein PXO_04173 PF00324 Amino acid permease PXO_04176 PF00041 Fibronectin type III domain PXO_04176 PF01341 Glycosyl hydrolases family 6 PXO_04176 PF00553 Cellulose binding domain PXO_04177 PF03330 Lytic transglycolase PXO_04178 PF00892 EamA-like transporter family PXO_04182 PF07759 Protein of unknown function (DUF1615) PXO_04190 PF00106 short chain dehydrogenase PXO_04192 PF13276 HTH-like domain PXO_04192 PF13683 Integrase core domain PXO_04193 PF01527 Transposase PXO_04195 PF00425 chorismate binding enzyme PXO_04195 PF04715 Anthranilate synthase component I, N terminal region PXO_04196 PF00781 Diacylglycerol kinase catalytic domain PXO_04197 PF00583 Acetyltransferase (GNAT) family PXO_04198 PF00834 Ribulose-phosphate 3 epimerase family PXO_04199 PF05099 Tellurite resistance protein TerB PXO_04199 PF00226 DnaJ domain PXO_04200 PF01259 SAICAR synthetase PXO_04204 PF07504 Fungalysin/Thermolysin Propeptide Motif PXO_04204 PF02868 Thermolysin metallopeptidase, alpha-helical domain PXO_04204 PF01483 Proprotein convertase P-domain PXO_04204 PF01447 Thermolysin metallopeptidase, catalytic domain PXO_04205 PF01483 Proprotein convertase P-domain PXO_04205 PF07504 Fungalysin/Thermolysin Propeptide Motif PXO_04205 PF02868 Thermolysin metallopeptidase, alpha-helical domain PXO_04205 PF01447 Thermolysin metallopeptidase, catalytic domain PXO_04206 PF07504 Fungalysin/Thermolysin Propeptide Motif PXO_04206 PF01447 Thermolysin metallopeptidase, catalytic domain PXO_04206 PF02868 Thermolysin metallopeptidase, alpha-helical domain PXO_04206 PF03413 Peptidase propeptide and YPEB domain PXO_04209 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter PXO_04209 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PXO_04209 PF13244 Domain of unknown function (DUF4040) PXO_04209 PF00361 Proton-conducting membrane transporter PXO_04210 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PXO_04211 PF00361 Proton-conducting membrane transporter PXO_04213 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) PXO_04214 PF03334 Na+/H+ antiporter subunit PXO_04215 PF04209 homogentisate 1,2-dioxygenase PXO_04216 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PXO_04217 PF01047 MarR family PXO_04219 PF00854 POT family PXO_04220 PF03301 Tryptophan 2,3-dioxygenase PXO_04222 PF00676 Dehydrogenase E1 component PXO_04223 PF02780 Transketolase, C-terminal domain PXO_04223 PF02779 Transketolase, pyrimidine binding domain PXO_04225 PF02779 Transketolase, pyrimidine binding domain PXO_04225 PF02780 Transketolase, C-terminal domain PXO_04228 PF02803 Thiolase, C-terminal domain PXO_04228 PF00108 Thiolase, N-terminal domain PXO_04244 PF01427 D-ala-D-ala dipeptidase PXO_04245 PF01510 N-acetylmuramoyl-L-alanine amidase PXO_04247 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PXO_04247 PF13378 Enolase C-terminal domain-like PXO_04252 PF01471 Putative peptidoglycan binding domain PXO_04252 PF01476 LysM domain PXO_04252 PF01510 N-acetylmuramoyl-L-alanine amidase PXO_04253 PF16671 Actin cross-linking domain PXO_04253 PF04717 Type VI secretion system, phage-baseplate injector PXO_04258 PF01098 Cell cycle protein PXO_04259 PF03717 Penicillin-binding Protein dimerisation domain PXO_04259 PF00905 Penicillin binding protein transpeptidase domain PXO_04261 PF04085 rod shape-determining protein MreC PXO_04263 PF00294 pfkB family carbohydrate kinase PXO_04268 PF13673 Acetyltransferase (GNAT) domain PXO_04271 PF13533 Biotin-lipoyl like PXO_04274 PF01209 ubiE/COQ5 methyltransferase family PXO_04275 PF00990 Diguanylate cyclase, GGDEF domain PXO_04275 PF17152 Periplasmic sensor domain PXO_04276 PF11838 ERAP1-like C-terminal domain PXO_04276 PF01433 Peptidase family M1 domain PXO_04279 PF00004 ATPase family associated with various cellular activities (AAA) PXO_04279 PF07724 AAA domain (Cdc48 subfamily) PXO_04279 PF10431 C-terminal, D2-small domain, of ClpB protein PXO_04280 PF00227 Proteasome subunit PXO_04282 PF13406 Transglycosylase SLT domain PXO_04283 PF03330 Lytic transglycolase PXO_04283 PF05036 Sporulation related domain PXO_04285 PF07943 Penicillin-binding protein 5, C-terminal domain PXO_04285 PF00768 D-alanyl-D-alanine carboxypeptidase PXO_04287 PF04359 Protein of unknown function (DUF493) PXO_04288 PF03099 Biotin/lipoate A/B protein ligase family PXO_04289 PF04055 Radical SAM superfamily PXO_04289 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family PXO_04290 PF03572 Peptidase family S41 PXO_04290 PF11818 C-terminal domain of tail specific protease (DUF3340) PXO_04290 PF00595 PDZ domain PXO_04290 PF17804 Tail specific protease N-terminal domain PXO_04292 PF00293 NUDIX domain PXO_04292 PF01467 Cytidylyltransferase-like PXO_04301 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain PXO_04301 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PXO_04302 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PXO_04302 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PXO_04303 PF04972 BON domain PXO_04304 PF01590 GAF domain PXO_04304 PF00512 His Kinase A (phospho-acceptor) domain PXO_04304 PF08446 PAS fold PXO_04304 PF00360 Phytochrome region PXO_04304 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_04305 PF00072 Response regulator receiver domain PXO_04306 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_04306 PF00512 His Kinase A (phospho-acceptor) domain PXO_04307 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) PXO_04310 PF13276 HTH-like domain PXO_04310 PF13683 Integrase core domain PXO_04312 PF01527 Transposase PXO_04316 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 PXO_04316 PF02836 Glycosyl hydrolases family 2, TIM barrel domain PXO_04316 PF02837 Glycosyl hydrolases family 2, sugar binding domain PXO_04316 PF00703 Glycosyl hydrolases family 2 PXO_04316 PF16355 Domain of unknown function (DUF4982) PXO_04321 PF07690 Major Facilitator Superfamily PXO_04322 PF00356 Bacterial regulatory proteins, lacI family PXO_04323 PF01380 SIS domain PXO_04324 PF01979 Amidohydrolase family PXO_04326 PF00535 Glycosyl transferase family 2 PXO_04327 PF01522 Polysaccharide deacetylase PXO_04327 PF14883 Hypothetical glycosyl hydrolase family 13 PXO_04338 PF05221 S-adenosyl-L-homocysteine hydrolase PXO_04338 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain PXO_04339 PF13649 Methyltransferase domain PXO_04345 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PXO_04349 PF09286 Pro-kumamolisin, activation domain PXO_04349 PF00082 Subtilase family PXO_04350 PF14765 Polyketide synthase dehydratase PXO_04350 PF00550 Phosphopantetheine attachment site PXO_04350 PF00107 Zinc-binding dehydrogenase PXO_04350 PF08659 KR domain PXO_04350 PF02801 Beta-ketoacyl synthase, C-terminal domain PXO_04350 PF00109 Beta-ketoacyl synthase, N-terminal domain PXO_04350 PF08240 Alcohol dehydrogenase GroES-like domain PXO_04350 PF16197 Ketoacyl-synthetase C-terminal extension PXO_04350 PF00698 Acyl transferase domain PXO_04353 PF02219 Methylenetetrahydrofolate reductase PXO_04356 PF00293 NUDIX domain PXO_04358 PF07516 SecA Wing and Scaffold domain PXO_04358 PF01043 SecA preprotein cross-linking domain PXO_04358 PF07517 SecA DEAD-like domain PXO_04358 PF02810 SEC-C motif PXO_04359 PF01551 Peptidase family M23 PXO_04359 PF01476 LysM domain PXO_04361 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase PXO_04362 PF12327 FtsZ family, C-terminal domain PXO_04362 PF00091 Tubulin/FtsZ family, GTPase domain PXO_04363 PF02491 SHS2 domain inserted in FTSA PXO_04364 PF03799 Cell division protein FtsQ PXO_04364 PF08478 POTRA domain, FtsQ-type PXO_04365 PF01820 D-ala D-ala ligase N-terminus PXO_04365 PF07478 D-ala D-ala ligase C-terminus PXO_04366 PF01225 Mur ligase family, catalytic domain PXO_04366 PF08245 Mur ligase middle domain PXO_04366 PF02875 Mur ligase family, glutamate ligase domain PXO_04367 PF03033 Glycosyltransferase family 28 N-terminal domain PXO_04367 PF04101 Glycosyltransferase family 28 C-terminal domain PXO_04368 PF01098 Cell cycle protein PXO_04369 PF00953 Glycosyl transferase family 4 PXO_04370 PF08245 Mur ligase middle domain PXO_04370 PF02875 Mur ligase family, glutamate ligase domain PXO_04370 PF01225 Mur ligase family, catalytic domain PXO_04371 PF01225 Mur ligase family, catalytic domain PXO_04371 PF08245 Mur ligase middle domain PXO_04371 PF02875 Mur ligase family, glutamate ligase domain PXO_04372 PF00905 Penicillin binding protein transpeptidase domain PXO_04372 PF03717 Penicillin-binding Protein dimerisation domain PXO_04373 PF04999 Cell division protein FtsL PXO_04374 PF01795 MraW methylase family PXO_04375 PF02381 MraZ protein, putative antitoxin-like PXO_04378 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PXO_04380 PF02021 Uncharacterised protein family UPF0102 PXO_04381 PF04307 LexA-binding, inner membrane-associated putative hydrolase PXO_04382 PF02913 FAD linked oxidases, C-terminal domain PXO_04382 PF01565 FAD binding domain PXO_04383 PF00072 Response regulator receiver domain PXO_04383 PF00486 Transcriptional regulatory protein, C terminal PXO_04384 PF13493 Domain of unknown function (DUF4118) PXO_04384 PF02702 Osmosensitive K+ channel His kinase sensor domain PXO_04384 PF13492 GAF domain PXO_04384 PF00512 His Kinase A (phospho-acceptor) domain PXO_04384 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_04385 PF02669 K+-transporting ATPase, c chain PXO_04387 PF03814 Potassium-transporting ATPase A subunit PXO_04395 PF02769 AIR synthase related protein, C-terminal domain PXO_04395 PF00586 AIR synthase related protein, N-terminal domain PXO_04396 PF01029 NusB family PXO_04397 PF00885 6,7-dimethyl-8-ribityllumazine synthase PXO_04398 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PXO_04398 PF00925 GTP cyclohydrolase II PXO_04399 PF00677 Lumazine binding domain PXO_04401 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PXO_04401 PF01872 RibD C-terminal domain PXO_04403 PF03477 ATP cone domain PXO_04405 PF00464 Serine hydroxymethyltransferase PXO_04409 PF12848 ABC transporter PXO_04409 PF00005 ABC transporter PXO_04413 PF00756 Putative esterase PXO_04414 PF04828 Glutathione-dependent formaldehyde-activating enzyme PXO_04416 PF00107 Zinc-binding dehydrogenase PXO_04416 PF08240 Alcohol dehydrogenase GroES-like domain PXO_04417 PF02583 Metal-sensitive transcriptional repressor PXO_04421 PF00486 Transcriptional regulatory protein, C terminal PXO_04421 PF00072 Response regulator receiver domain PXO_04422 PF16527 Two-component sensor protein CpxA, periplasmic domain PXO_04422 PF00672 HAMP domain PXO_04422 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_04422 PF00512 His Kinase A (phospho-acceptor) domain PXO_04427 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_04427 PF00672 HAMP domain PXO_04427 PF00512 His Kinase A (phospho-acceptor) domain PXO_04428 PF04107 Glutamate-cysteine ligase family 2(GCS2) PXO_04431 PF01926 50S ribosome-binding GTPase PXO_04432 PF00034 Cytochrome c PXO_04436 PF02028 BCCT, betaine/carnitine/choline family transporter PXO_04437 PF13276 HTH-like domain PXO_04437 PF13683 Integrase core domain PXO_04438 PF01527 Transposase PXO_04439 PF05598 Transposase domain (DUF772) PXO_04439 PF01609 Transposase DDE domain PXO_04441 PF00291 Pyridoxal-phosphate dependent enzyme PXO_04441 PF13291 ACT domain PXO_04442 PF01527 Transposase PXO_04446 PF01743 Poly A polymerase head domain PXO_04446 PF01966 HD domain PXO_04446 PF12627 Probable RNA and SrmB- binding site of polymerase A PXO_04450 PF01527 Transposase PXO_04451 PF02222 ATP-grasp domain PXO_04456 PF00730 HhH-GPD superfamily base excision DNA repair protein PXO_04459 PF00072 Response regulator receiver domain PXO_04459 PF00196 Bacterial regulatory proteins, luxR family PXO_04460 PF07730 Histidine kinase PXO_04463 PF03775 Septum formation inhibitor MinC, C-terminal domain PXO_04463 PF05209 Septum formation inhibitor MinC, N-terminal domain PXO_04464 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PXO_04465 PF03776 Septum formation topological specificity factor MinE PXO_04467 PF00512 His Kinase A (phospho-acceptor) domain PXO_04467 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_04467 PF08521 Two-component sensor kinase N-terminal PXO_04469 PF00072 Response regulator receiver domain PXO_04469 PF00486 Transcriptional regulatory protein, C terminal PXO_04470 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase PXO_04472 PF00884 Sulfatase PXO_04472 PF08019 Phosphoethanolamine transferase EptA/EptB PXO_04477 PF00664 ABC transporter transmembrane region PXO_04477 PF00005 ABC transporter PXO_04477 PF03412 Peptidase C39 family PXO_04482 PF02347 Glycine cleavage system P-protein PXO_04488 PF13276 HTH-like domain PXO_04488 PF13683 Integrase core domain PXO_04490 PF01527 Transposase PXO_04492 PF00665 Integrase core domain PXO_04492 PF13936 Helix-turn-helix domain PXO_04495 PF01196 Ribosomal protein L17 PXO_04496 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain PXO_04496 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain PXO_04496 PF01000 RNA polymerase Rpb3/RpoA insert domain PXO_04497 PF01479 S4 domain PXO_04497 PF00163 Ribosomal protein S4/S9 N-terminal domain PXO_04498 PF00411 Ribosomal protein S11 PXO_04499 PF00416 Ribosomal protein S13/S18 PXO_04500 PF00344 SecY translocase PXO_04501 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A PXO_04502 PF00327 Ribosomal protein L30p/L7e PXO_04503 PF00333 Ribosomal protein S5, N-terminal domain PXO_04503 PF03719 Ribosomal protein S5, C-terminal domain PXO_04504 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast PXO_04506 PF00347 Ribosomal protein L6 PXO_04507 PF00410 Ribosomal protein S8 PXO_04508 PF00253 Ribosomal protein S14p/S29e PXO_04509 PF00281 Ribosomal protein L5 PXO_04509 PF00673 ribosomal L5P family C-terminus PXO_04510 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 PXO_04510 PF00467 KOW motif PXO_04511 PF00238 Ribosomal protein L14p/L23e PXO_04512 PF00366 Ribosomal protein S17 PXO_04513 PF00831 Ribosomal L29 protein PXO_04514 PF00252 Ribosomal protein L16p/L10e PXO_04515 PF00189 Ribosomal protein S3, C-terminal domain PXO_04515 PF07650 KH domain PXO_04516 PF00237 Ribosomal protein L22p/L17e PXO_04517 PF00203 Ribosomal protein S19 PXO_04518 PF03947 Ribosomal Proteins L2, C-terminal domain PXO_04518 PF00181 Ribosomal Proteins L2, RNA binding domain PXO_04519 PF00276 Ribosomal protein L23 PXO_04520 PF00573 Ribosomal protein L4/L1 family PXO_04521 PF00297 Ribosomal protein L3 PXO_04522 PF00338 Ribosomal protein S10p/S20e PXO_04524 PF03144 Elongation factor Tu domain 2 PXO_04524 PF00009 Elongation factor Tu GTP binding domain PXO_04524 PF03143 Elongation factor Tu C-terminal domain PXO_04525 PF03764 Elongation factor G, domain IV PXO_04525 PF00009 Elongation factor Tu GTP binding domain PXO_04525 PF14492 Elongation Factor G, domain II PXO_04525 PF00679 Elongation factor G C-terminus PXO_04525 PF03144 Elongation factor Tu domain 2 PXO_04527 PF00177 Ribosomal protein S7p/S5e PXO_04528 PF00164 Ribosomal protein S12/S23 PXO_04529 PF00623 RNA polymerase Rpb1, domain 2 PXO_04529 PF04997 RNA polymerase Rpb1, domain 1 PXO_04529 PF05000 RNA polymerase Rpb1, domain 4 PXO_04529 PF04998 RNA polymerase Rpb1, domain 5 PXO_04529 PF04983 RNA polymerase Rpb1, domain 3 PXO_04530 PF04560 RNA polymerase Rpb2, domain 7 PXO_04530 PF04561 RNA polymerase Rpb2, domain 2 PXO_04530 PF04565 RNA polymerase Rpb2, domain 3 PXO_04530 PF10385 RNA polymerase beta subunit external 1 domain PXO_04530 PF00562 RNA polymerase Rpb2, domain 6 PXO_04530 PF04563 RNA polymerase beta subunit PXO_04531 PF00542 Ribosomal protein L7/L12 C-terminal domain PXO_04531 PF16320 Ribosomal protein L7/L12 dimerisation domain PXO_04532 PF00466 Ribosomal protein L10 PXO_04533 PF00687 Ribosomal protein L1p/L10e family PXO_04534 PF00298 Ribosomal protein L11, RNA binding domain PXO_04534 PF03946 Ribosomal protein L11, N-terminal domain PXO_04536 PF02357 Transcription termination factor nusG PXO_04536 PF00467 KOW motif PXO_04537 PF00584 SecE/Sec61-gamma subunits of protein translocation complex PXO_04538 PF03143 Elongation factor Tu C-terminal domain PXO_04538 PF03144 Elongation factor Tu domain 2 PXO_04538 PF00009 Elongation factor Tu GTP binding domain PXO_04539 PF01926 50S ribosome-binding GTPase PXO_04539 PF06071 Protein of unknown function (DUF933) PXO_04540 PF01195 Peptidyl-tRNA hydrolase PXO_04541 PF14693 Ribosomal protein TL5, C-terminal domain PXO_04541 PF01386 Ribosomal L25p family PXO_04542 PF14572 Phosphoribosyl synthetase-associated domain PXO_04542 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase PXO_04544 PF00288 GHMP kinases N terminal domain PXO_04544 PF08544 GHMP kinases C terminal PXO_04545 PF03550 Outer membrane lipoprotein LolB PXO_04547 PF01488 Shikimate / quinate 5-dehydrogenase PXO_04547 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain PXO_04547 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain PXO_04548 PF00472 RF-1 domain PXO_04548 PF03462 PCRF domain PXO_04550 PF00994 Probable molybdopterin binding domain PXO_04552 PF03976 Polyphosphate kinase 2 (PPK2) PXO_04553 PF00708 Acylphosphatase PXO_04554 PF08534 Redoxin PXO_04555 PF03631 Virulence factor BrkB PXO_04556 PF03358 NADPH-dependent FMN reductase PXO_04558 PF17189 Glycosyl hydrolase family 30 beta sandwich domain PXO_04558 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain PXO_04560 PF04073 Aminoacyl-tRNA editing domain PXO_04561 PF04151 Bacterial pre-peptidase C-terminal domain PXO_04561 PF00082 Subtilase family PXO_04562 PF00082 Subtilase family PXO_04562 PF04151 Bacterial pre-peptidase C-terminal domain PXO_04566 PF01063 Amino-transferase class IV PXO_04570 PF02233 NAD(P) transhydrogenase beta subunit PXO_04571 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch PXO_04576 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch PXO_04576 PF05222 Alanine dehydrogenase/PNT, N-terminal domain PXO_04576 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PXO_04579 PF01612 3'-5' exonuclease PXO_04579 PF00476 DNA polymerase family A PXO_04579 PF01367 5'-3' exonuclease, C-terminal SAM fold PXO_04579 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain PXO_04580 PF00293 NUDIX domain PXO_04582 PF00561 alpha/beta hydrolase fold PXO_04588 PF05175 Methyltransferase small domain PXO_04588 PF17827 PrmC N-terminal domain PXO_04589 PF10417 C-terminal domain of 1-Cys peroxiredoxin PXO_04589 PF00578 AhpC/TSA family PXO_04590 PF13192 Thioredoxin domain PXO_04590 PF07992 Pyridine nucleotide-disulphide oxidoreductase PXO_04591 PF03466 LysR substrate binding domain PXO_04591 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PXO_04592 PF01272 Transcription elongation factor, GreA/GreB, C-term PXO_04592 PF03449 Transcription elongation factor, N-terminal PXO_04593 PF00923 Transaldolase/Fructose-6-phosphate aldolase PXO_04598 PF01625 Peptide methionine sulfoxide reductase PXO_04600 PF00072 Response regulator receiver domain PXO_04600 PF00196 Bacterial regulatory proteins, luxR family PXO_04603 PF01609 Transposase DDE domain PXO_04603 PF05598 Transposase domain (DUF772) PXO_04605 PF00672 HAMP domain PXO_04605 PF01627 Hpt domain PXO_04605 PF00072 Response regulator receiver domain PXO_04605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_04605 PF00512 His Kinase A (phospho-acceptor) domain PXO_04605 PF17149 Periplasmic sensor domain found in signal transduction proteins PXO_04606 PF00072 Response regulator receiver domain PXO_04606 PF00990 Diguanylate cyclase, GGDEF domain PXO_04610 PF00749 tRNA synthetases class I (E and Q), catalytic domain PXO_04610 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain PXO_04612 PF00665 Integrase core domain PXO_04612 PF13936 Helix-turn-helix domain PXO_04617 PF00892 EamA-like transporter family PXO_04620 PF01728 FtsJ-like methyltransferase PXO_04620 PF18125 RlmM ferredoxin-like domain PXO_04621 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PXO_04621 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PXO_04622 PF08450 SMP-30/Gluconolactonase/LRE-like region PXO_04626 PF00378 Enoyl-CoA hydratase/isomerase PXO_04627 PF00171 Aldehyde dehydrogenase family PXO_04628 PF00501 AMP-binding enzyme PXO_04628 PF13193 AMP-binding enzyme C-terminal domain PXO_04629 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PXO_04629 PF03466 LysR substrate binding domain PXO_04630 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit PXO_04630 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase PXO_04631 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase PXO_04632 PF07729 FCD domain PXO_04632 PF00392 Bacterial regulatory proteins, gntR family PXO_04637 PF01494 FAD binding domain PXO_04638 PF01494 FAD binding domain PXO_04640 PF01923 Cobalamin adenosyltransferase PXO_04641 PF00850 Histone deacetylase domain PXO_04642 PF03968 OstA-like protein PXO_04642 PF04453 LPS transport system D PXO_04643 PF09312 SurA N-terminal domain PXO_04643 PF00639 PPIC-type PPIASE domain PXO_04644 PF04166 Pyridoxal phosphate biosynthetic protein PdxA PXO_04645 PF00398 Ribosomal RNA adenine dimethylase PXO_04646 PF04379 ApaG domain PXO_04647 PF00149 Calcineurin-like phosphoesterase PXO_04648 PF00186 Dihydrofolate reductase PXO_04649 PF00303 Thymidylate synthase PXO_04650 PF01790 Prolipoprotein diacylglyceryl transferase PXO_04654 PF01219 Prokaryotic diacylglycerol kinase PXO_04658 PF00512 His Kinase A (phospho-acceptor) domain PXO_04658 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_04658 PF08521 Two-component sensor kinase N-terminal PXO_04659 PF00072 Response regulator receiver domain PXO_04659 PF00486 Transcriptional regulatory protein, C terminal PXO_04660 PF13472 GDSL-like Lipase/Acylhydrolase family PXO_04661 PF00005 ABC transporter PXO_04663 PF02668 Taurine catabolism dioxygenase TauD, TfdA family PXO_04668 PF00528 Binding-protein-dependent transport system inner membrane component PXO_04673 PF00248 Aldo/keto reductase family PXO_04676 PF01609 Transposase DDE domain PXO_04676 PF05598 Transposase domain (DUF772) PXO_04679 PF07670 Nucleoside recognition PXO_04679 PF07662 Na+ dependent nucleoside transporter C-terminus PXO_04679 PF01773 Na+ dependent nucleoside transporter N-terminus PXO_04680 PF00294 pfkB family carbohydrate kinase PXO_04682 PF01207 Dihydrouridine synthase (Dus) PXO_04683 PF13649 Methyltransferase domain PXO_04686 PF00438 S-adenosylmethionine synthetase, N-terminal domain PXO_04686 PF02773 S-adenosylmethionine synthetase, C-terminal domain PXO_04686 PF02772 S-adenosylmethionine synthetase, central domain PXO_04687 PF00328 Histidine phosphatase superfamily (branch 2) PXO_04694 PF00311 Phosphoenolpyruvate carboxylase PXO_04698 PF00691 OmpA family PXO_04698 PF04972 BON domain PXO_04700 PF04717 Type VI secretion system, phage-baseplate injector PXO_04702 PF03781 Sulfatase-modifying factor enzyme 1 PXO_04707 PF01609 Transposase DDE domain PXO_04707 PF05598 Transposase domain (DUF772) PXO_04713 PF04717 Type VI secretion system, phage-baseplate injector PXO_04714 PF03781 Sulfatase-modifying factor enzyme 1 PXO_04718 PF03781 Sulfatase-modifying factor enzyme 1 PXO_04722 PF01609 Transposase DDE domain PXO_04722 PF05598 Transposase domain (DUF772) PXO_04727 PF01609 Transposase DDE domain PXO_04727 PF05598 Transposase domain (DUF772) PXO_04735 PF00145 C-5 cytosine-specific DNA methylase PXO_04736 PF01609 Transposase DDE domain PXO_04736 PF05598 Transposase domain (DUF772) PXO_04742 PF00512 His Kinase A (phospho-acceptor) domain PXO_04742 PF00672 HAMP domain PXO_04742 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_04743 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ PXO_04745 PF00271 Helicase conserved C-terminal domain PXO_04745 PF00270 DEAD/DEAH box helicase PXO_04745 PF02559 CarD-like/TRCF domain PXO_04745 PF17757 UvrB interaction domain PXO_04745 PF03461 TRCF domain PXO_04748 PF05598 Transposase domain (DUF772) PXO_04748 PF01609 Transposase DDE domain PXO_04751 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PXO_04751 PF00672 HAMP domain PXO_04752 PF01584 CheW-like domain PXO_04753 PF13426 PAS domain PXO_04753 PF00990 Diguanylate cyclase, GGDEF domain PXO_04753 PF00563 EAL domain PXO_04754 PF03705 CheR methyltransferase, all-alpha domain PXO_04754 PF01739 CheR methyltransferase, SAM binding domain PXO_04755 PF00072 Response regulator receiver domain PXO_04755 PF01339 CheB methylesterase PXO_04756 PF13091 PLD-like domain PXO_04757 PF01431 Peptidase family M13 PXO_04757 PF05649 Peptidase family M13 PXO_04761 PF00300 Histidine phosphatase superfamily (branch 1) PXO_04762 PF04493 Endonuclease V PXO_04763 PF02678 Pirin PXO_04763 PF05726 Pirin C-terminal cupin domain PXO_04767 PF05598 Transposase domain (DUF772) PXO_04767 PF01609 Transposase DDE domain PXO_04771 PF04545 Sigma-70, region 4 PXO_04771 PF04539 Sigma-70 region 3 PXO_04771 PF04542 Sigma-70 region 2 PXO_04780 PF06029 AlkA N-terminal domain PXO_04780 PF00730 HhH-GPD superfamily base excision DNA repair protein PXO_04780 PF12833 Helix-turn-helix domain PXO_04780 PF02805 Metal binding domain of Ada PXO_04781 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PXO_04781 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PXO_04784 PF00654 Voltage gated chloride channel PXO_04785 PF00107 Zinc-binding dehydrogenase PXO_04785 PF08240 Alcohol dehydrogenase GroES-like domain PXO_04789 PF00593 TonB dependent receptor PXO_04789 PF07715 TonB-dependent Receptor Plug Domain PXO_04793 PF00691 OmpA family PXO_04793 PF05736 OprF membrane domain PXO_04795 PF03441 FAD binding domain of DNA photolyase PXO_04795 PF00875 DNA photolyase PXO_04796 PF03796 DnaB-like helicase C terminal domain PXO_04796 PF00772 DnaB-like helicase N terminal domain PXO_04797 PF03358 NADPH-dependent FMN reductase PXO_04798 PF13537 Glutamine amidotransferase domain PXO_04798 PF00733 Asparagine synthase PXO_04799 PF13417 Glutathione S-transferase, N-terminal domain PXO_04805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PXO_04805 PF02770 Acyl-CoA dehydrogenase, middle domain PXO_04805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PXO_04808 PF01026 TatD related DNase PXO_04809 PF00899 ThiF family PXO_04812 PF00313 'Cold-shock' DNA-binding domain PXO_04816 PF05598 Transposase domain (DUF772) PXO_04819 PF01475 Ferric uptake regulator family PXO_04820 PF00749 tRNA synthetases class I (E and Q), catalytic domain PXO_04823 PF00795 Carbon-nitrogen hydrolase PXO_04825 PF03880 DbpA RNA binding domain PXO_04825 PF00271 Helicase conserved C-terminal domain PXO_04825 PF00270 DEAD/DEAH box helicase PXO_04826 PF08448 PAS fold PXO_04826 PF00990 Diguanylate cyclase, GGDEF domain PXO_04826 PF00563 EAL domain PXO_04827 PF01479 S4 domain PXO_04827 PF00849 RNA pseudouridylate synthase PXO_04832 PF03737 Aldolase/RraA PXO_04833 PF00144 Beta-lactamase PXO_04834 PF00999 Sodium/hydrogen exchanger family PXO_04835 PF00512 His Kinase A (phospho-acceptor) domain PXO_04835 PF00672 HAMP domain PXO_04835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_04836 PF00486 Transcriptional regulatory protein, C terminal PXO_04836 PF00072 Response regulator receiver domain PXO_04837 PF02321 Outer membrane efflux protein PXO_04840 PF00873 AcrB/AcrD/AcrF family PXO_04842 PF00005 ABC transporter PXO_04842 PF00664 ABC transporter transmembrane region PXO_04845 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_04848 PF01609 Transposase DDE domain PXO_04848 PF05598 Transposase domain (DUF772) PXO_04849 PF03527 RHS protein PXO_04850 PF01609 Transposase DDE domain PXO_04850 PF05598 Transposase domain (DUF772) PXO_04856 PF04542 Sigma-70 region 2 PXO_04856 PF08281 Sigma-70, region 4 PXO_04859 PF04376 Arginine-tRNA-protein transferase, N terminus PXO_04859 PF04377 Arginine-tRNA-protein transferase, C terminus PXO_04865 PF00593 TonB dependent receptor PXO_04865 PF07715 TonB-dependent Receptor Plug Domain PXO_04867 PF02358 Trehalose-phosphatase PXO_04868 PF00723 Glycosyl hydrolases family 15 PXO_04869 PF00982 Glycosyltransferase family 20 PXO_04873 PF00849 RNA pseudouridylate synthase PXO_04874 PF13525 Outer membrane lipoprotein PXO_04876 PF00795 Carbon-nitrogen hydrolase PXO_04876 PF02540 NAD synthase PXO_04878 PF02629 CoA binding domain PXO_04878 PF00549 CoA-ligase PXO_04879 PF08442 ATP-grasp domain PXO_04879 PF00549 CoA-ligase PXO_04880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_04880 PF00512 His Kinase A (phospho-acceptor) domain PXO_04881 PF02954 Bacterial regulatory protein, Fis family PXO_04881 PF00072 Response regulator receiver domain PXO_04881 PF00158 Sigma-54 interaction domain PXO_04882 PF00437 Type II/IV secretion system protein PXO_04882 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain PXO_04883 PF17284 Spermidine synthase tetramerisation domain PXO_04885 PF00884 Sulfatase PXO_04885 PF08019 Phosphoethanolamine transferase EptA/EptB PXO_04886 PF07963 Prokaryotic N-terminal methylation motif PXO_04886 PF00114 Pilin (bacterial filament) PXO_04887 PF00482 Type II secretion system (T2SS), protein F PXO_04888 PF01478 Type IV leader peptidase family PXO_04888 PF06750 Bacterial Peptidase A24 N-terminal domain PXO_04889 PF01121 Dephospho-CoA kinase PXO_04893 PF17760 UvrA interaction domain PXO_04893 PF00005 ABC transporter PXO_04893 PF17755 UvrA DNA-binding domain PXO_05418 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05425 PF13936 Helix-turn-helix domain PXO_05425 PF00665 Integrase core domain PXO_05437 PF17946 RecC C-terminal domain PXO_05439 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05443 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05448 PF01527 Transposase PXO_05450 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05463 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05465 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05466 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05473 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05485 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05492 PF04828 Glutathione-dependent formaldehyde-activating enzyme PXO_05501 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05507 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05513 PF03781 Sulfatase-modifying factor enzyme 1 PXO_05516 PF01609 Transposase DDE domain PXO_05516 PF05598 Transposase domain (DUF772) PXO_05526 PF01609 Transposase DDE domain PXO_05526 PF05598 Transposase domain (DUF772) PXO_05532 PF00378 Enoyl-CoA hydratase/isomerase PXO_05533 PF00829 Ribosomal prokaryotic L21 protein PXO_05534 PF01016 Ribosomal L27 protein PXO_05535 PF00133 tRNA synthetases class I (I, L, M and V) PXO_05535 PF06827 Zinc finger found in FPG and IleRS PXO_05535 PF08264 Anticodon-binding domain of tRNA PXO_05536 PF01252 Signal peptidase (SPase) II PXO_05537 PF02401 LytB protein PXO_05538 PF05593 RHS Repeat PXO_05538 PF03527 RHS protein PXO_05538 PF14220 Domain of unknown function (DUF4329) PXO_05538 PF05593 RHS Repeat PXO_05538 PF14220 Domain of unknown function (DUF4329) PXO_05538 PF03527 RHS protein PXO_05545 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05556 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05573 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05577 PF01609 Transposase DDE domain PXO_05577 PF05598 Transposase domain (DUF772) PXO_05578 PF05598 Transposase domain (DUF772) PXO_05583 PF12849 PBP superfamily domain PXO_05585 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05593 PF13936 Helix-turn-helix domain PXO_05593 PF00665 Integrase core domain PXO_05594 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05595 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05596 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05606 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05611 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase PXO_05611 PF01502 Phosphoribosyl-AMP cyclohydrolase PXO_05617 PF00355 Rieske [2Fe-2S] domain PXO_05617 PF01266 FAD dependent oxidoreductase PXO_05625 PF05598 Transposase domain (DUF772) PXO_05625 PF01609 Transposase DDE domain PXO_05628 PF05598 Transposase domain (DUF772) PXO_05631 PF03527 RHS protein PXO_05631 PF05593 RHS Repeat PXO_05633 PF03377 TAL effector repeat PXO_05637 PF00872 Transposase, Mutator family PXO_05639 PF01609 Transposase DDE domain PXO_05639 PF05598 Transposase domain (DUF772) PXO_05641 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05645 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05648 PF07733 Bacterial DNA polymerase III alpha NTPase domain PXO_05648 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PXO_05648 PF14579 Helix-hairpin-helix motif PXO_05648 PF02811 PHP domain PXO_05648 PF01336 OB-fold nucleic acid binding domain PXO_05659 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05662 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05663 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05664 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05679 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05683 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05685 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05687 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05688 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05689 PF01609 Transposase DDE domain PXO_05689 PF05598 Transposase domain (DUF772) PXO_05698 PF01527 Transposase PXO_05703 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase PXO_05705 PF01527 Transposase PXO_05714 PF03377 TAL effector repeat PXO_05718 PF03377 TAL effector repeat PXO_05727 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05736 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05737 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05738 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05757 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05777 PF01527 Transposase PXO_05778 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05779 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05783 PF13340 Putative transposase of IS4/5 family (DUF4096) PXO_05793 PF04055 Radical SAM superfamily PXO_05796 PF13396 Phospholipase_D-nuclease N-terminal PXO_05796 PF13091 PLD-like domain PXO_05829 PF12626 Polymerase A arginine-rich C-terminus PXO_05829 PF12627 Probable RNA and SrmB- binding site of polymerase A PXO_05829 PF01743 Poly A polymerase head domain PXO_06050 PF09339 IclR helix-turn-helix domain PXO_06050 PF01614 Bacterial transcriptional regulator PXO_06055 PF13683 Integrase core domain PXO_06055 PF13276 HTH-like domain PXO_06060 PF00795 Carbon-nitrogen hydrolase PXO_06061 PF00155 Aminotransferase class I and II PXO_06062 PF00005 ABC transporter PXO_06063 PF03379 CcmB protein PXO_06064 PF01578 Cytochrome C assembly protein PXO_06066 PF03100 CcmE PXO_06067 PF01578 Cytochrome C assembly protein PXO_06067 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal PXO_06068 PF08534 Redoxin PXO_06069 PF03918 Cytochrome C biogenesis protein PXO_06074 PF01565 FAD binding domain PXO_06074 PF02913 FAD linked oxidases, C-terminal domain PXO_06075 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PXO_06075 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PXO_06077 PF13520 Amino acid permease PXO_06078 PF13520 Amino acid permease PXO_06079 PF00596 Class II Aldolase and Adducin N-terminal domain PXO_06080 PF03079 ARD/ARD' family PXO_06088 PF01609 Transposase DDE domain PXO_06088 PF05598 Transposase domain (DUF772) PXO_06090 PF00899 ThiF family PXO_06094 PF05598 Transposase domain (DUF772) PXO_06099 PF00665 Integrase core domain PXO_06099 PF13936 Helix-turn-helix domain PXO_06107 PF03453 MoeA N-terminal region (domain I and II) PXO_06107 PF03454 MoeA C-terminal region (domain IV) PXO_06107 PF00994 Probable molybdopterin binding domain PXO_06108 PF01926 50S ribosome-binding GTPase PXO_06108 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal PXO_06109 PF13360 PQQ-like domain PXO_06109 PF01011 PQQ enzyme repeat PXO_06111 PF13464 Domain of unknown function (DUF4115) PXO_06113 PF04055 Radical SAM superfamily PXO_06114 PF00334 Nucleoside diphosphate kinase PXO_06116 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PXO_06116 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PXO_06116 PF00378 Enoyl-CoA hydratase/isomerase PXO_06117 PF02803 Thiolase, C-terminal domain PXO_06117 PF00108 Thiolase, N-terminal domain PXO_06118 PF00654 Voltage gated chloride channel PXO_06121 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PXO_06123 PF16193 AAA C-terminal domain PXO_06123 PF12002 MgsA AAA+ ATPase C terminal PXO_06123 PF00004 ATPase family associated with various cellular activities (AAA) PXO_06126 PF03548 Outer membrane lipoprotein carrier protein LolA PXO_06128 PF01580 FtsK/SpoIIIE family PXO_06128 PF13491 4TM region of DNA translocase FtsK/SpoIIIE PXO_06128 PF09397 Ftsk gamma domain PXO_06128 PF17854 FtsK alpha domain PXO_06129 PF07992 Pyridine nucleotide-disulphide oxidoreductase PXO_06134 PF03588 Leucyl/phenylalanyl-tRNA protein transferase PXO_06135 PF01176 Translation initiation factor 1A / IF-1 PXO_06136 PF10431 C-terminal, D2-small domain, of ClpB protein PXO_06136 PF00004 ATPase family associated with various cellular activities (AAA) PXO_06136 PF02861 Clp amino terminal domain, pathogenicity island component PXO_06136 PF17871 AAA lid domain PXO_06136 PF07724 AAA domain (Cdc48 subfamily) PXO_06137 PF02617 ATP-dependent Clp protease adaptor protein ClpS PXO_06139 PF00293 NUDIX domain PXO_06141 PF04356 Protein of unknown function (DUF489) PXO_06142 PF00672 HAMP domain PXO_06142 PF12729 Four helix bundle sensory module for signal transduction PXO_06142 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PXO_06145 PF00563 EAL domain PXO_06145 PF08447 PAS fold PXO_06145 PF08448 PAS fold PXO_06145 PF00990 Diguanylate cyclase, GGDEF domain PXO_06146 PF07730 Histidine kinase PXO_06146 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_06147 PF00990 Diguanylate cyclase, GGDEF domain PXO_06147 PF03707 Bacterial signalling protein N terminal repeat PXO_06147 PF00563 EAL domain PXO_06148 PF13426 PAS domain PXO_06148 PF13188 PAS domain PXO_06148 PF00989 PAS fold PXO_06148 PF00512 His Kinase A (phospho-acceptor) domain PXO_06148 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_06152 PF00072 Response regulator receiver domain PXO_06152 PF01584 CheW-like domain PXO_06153 PF00460 Flagella basal body rod protein PXO_06154 PF00460 Flagella basal body rod protein PXO_06154 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PXO_06155 PF03963 Flagellar hook capping protein - N-terminal region PXO_06156 PF07559 Flagellar basal body protein FlaE PXO_06156 PF00460 Flagella basal body rod protein PXO_06156 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PXO_06158 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PXO_06158 PF00460 Flagella basal body rod protein PXO_06159 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PXO_06159 PF00460 Flagella basal body rod protein PXO_06160 PF02107 Flagellar L-ring protein PXO_06161 PF02119 Flagellar P-ring protein PXO_06162 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase PXO_06162 PF10135 Rod binding protein PXO_06163 PF07196 Flagellin hook IN motif PXO_06163 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PXO_06165 PF00669 Bacterial flagellin N-terminal helical region PXO_06165 PF00700 Bacterial flagellin C-terminal helical region PXO_06166 PF07195 Flagellar hook-associated protein 2 C-terminus PXO_06166 PF02465 Flagellar hook-associated protein 2 N-terminus PXO_06166 PF07196 Flagellin hook IN motif PXO_06167 PF02561 Flagellar protein FliS PXO_06170 PF00072 Response regulator receiver domain PXO_06170 PF00196 Bacterial regulatory proteins, luxR family PXO_06171 PF00309 Sigma-54 factor, Activator interacting domain (AID) PXO_06171 PF04552 Sigma-54, DNA binding domain PXO_06171 PF04963 Sigma-54 factor, core binding domain PXO_06172 PF00072 Response regulator receiver domain PXO_06172 PF01339 CheB methylesterase PXO_06173 PF00158 Sigma-54 interaction domain PXO_06173 PF00072 Response regulator receiver domain PXO_06173 PF02954 Bacterial regulatory protein, Fis family PXO_06174 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PXO_06176 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PXO_06176 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PXO_06183 PF00534 Glycosyl transferases group 1 PXO_06183 PF00535 Glycosyl transferase family 2 PXO_06184 PF02049 Flagellar hook-basal body complex protein FliE PXO_06185 PF01514 Secretory protein of YscJ/FliF family PXO_06185 PF08345 Flagellar M-ring protein C-terminal PXO_06186 PF01706 FliG C-terminal domain PXO_06186 PF14842 FliG N-terminal domain PXO_06186 PF14841 FliG middle domain PXO_06188 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PXO_06188 PF18269 T3SS EscN ATPase C-terminal domain PXO_06192 PF02154 Flagellar motor switch protein FliM PXO_06192 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PXO_06193 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PXO_06194 PF04347 Flagellar biosynthesis protein, FliO PXO_06195 PF00813 FliP family PXO_06197 PF01313 Bacterial export proteins, family 3 PXO_06198 PF01311 Bacterial export proteins, family 1 PXO_06199 PF03707 Bacterial signalling protein N terminal repeat PXO_06199 PF00990 Diguanylate cyclase, GGDEF domain PXO_06199 PF13188 PAS domain PXO_06199 PF00563 EAL domain PXO_06201 PF13188 PAS domain PXO_06201 PF00990 Diguanylate cyclase, GGDEF domain PXO_06201 PF00563 EAL domain PXO_06201 PF03707 Bacterial signalling protein N terminal repeat PXO_06202 PF00563 EAL domain PXO_06202 PF03707 Bacterial signalling protein N terminal repeat PXO_06202 PF00990 Diguanylate cyclase, GGDEF domain PXO_06204 PF01312 FlhB HrpN YscU SpaS Family PXO_06205 PF00771 FHIPEP family PXO_06207 PF00448 SRP54-type protein, GTPase domain PXO_06208 PF10609 NUBPL iron-transfer P-loop NTPase PXO_06209 PF04542 Sigma-70 region 2 PXO_06209 PF04539 Sigma-70 region 3 PXO_06209 PF04545 Sigma-70, region 4 PXO_06210 PF00072 Response regulator receiver domain PXO_06211 PF04344 Chemotaxis phosphatase, CheZ PXO_06212 PF07194 P2 response regulator binding domain PXO_06212 PF01627 Hpt domain PXO_06212 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PXO_06212 PF02895 Signal transducing histidine kinase, homodimeric domain PXO_06212 PF01584 CheW-like domain PXO_06216 PF13936 Helix-turn-helix domain PXO_06216 PF00665 Integrase core domain PXO_06218 PF03527 RHS protein PXO_06218 PF05593 RHS Repeat PXO_06221 PF03527 RHS protein PXO_06221 PF05593 RHS Repeat PXO_06225 PF00665 Integrase core domain PXO_06225 PF13276 HTH-like domain PXO_06225 PF13333 Integrase core domain PXO_06226 PF13333 Integrase core domain PXO_06226 PF13276 HTH-like domain PXO_06226 PF00665 Integrase core domain PXO_06229 PF03377 TAL effector repeat PXO_06234 PF03377 TAL effector repeat PXO_06237 PF03466 LysR substrate binding domain PXO_06237 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PXO_06238 PF02525 Flavodoxin-like fold PXO_06239 PF01609 Transposase DDE domain PXO_06239 PF05598 Transposase domain (DUF772) PXO_06242 PF02403 Seryl-tRNA synthetase N-terminal domain PXO_06242 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PXO_06243 PF03544 Gram-negative bacterial TonB protein C-terminal PXO_06245 PF01527 Transposase PXO_06246 PF13683 Integrase core domain PXO_06246 PF13276 HTH-like domain PXO_06247 PF05598 Transposase domain (DUF772) PXO_06257 PF00561 alpha/beta hydrolase fold PXO_06258 PF00313 'Cold-shock' DNA-binding domain PXO_06261 PF00872 Transposase, Mutator family