PXO_00005 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. PXO_00012 SM00904 Riboflavin kinase PXO_00029 SM00260 Two component signalling adaptor domain PXO_00031 SM00448 cheY-homologous receiver domain PXO_00032 SM00073 Histidine Phosphotransfer domain PXO_00032 SM00260 Two component signalling adaptor domain PXO_00032 SM00387 Histidine kinase-like ATPases PXO_00032 SM01231 PXO_00032 PXO_00036 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PXO_00039 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PXO_00040 SM01126 PXO_00040 PXO_00041 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PXO_00041 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PXO_00043 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PXO_00043 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PXO_00045 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PXO_00045 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PXO_00046 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PXO_00046 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PXO_00047 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PXO_00047 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PXO_00050 SM00260 Two component signalling adaptor domain PXO_00054 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PXO_00054 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PXO_00055 SM00138 Methyltransferase, chemotaxis proteins PXO_00057 SM00448 cheY-homologous receiver domain PXO_00058 SM00052 Putative diguanylate phosphodiesterase PXO_00058 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. PXO_00058 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) PXO_00058 SM00091 PAS domain PXO_00058 SM00267 diguanylate cyclase PXO_00063 SM00966 SpoVT / AbrB like domain PXO_00069 SM00073 Histidine Phosphotransfer domain PXO_00069 SM00387 Histidine kinase-like ATPases PXO_00069 SM00388 His Kinase A (phosphoacceptor) domain PXO_00069 SM00448 cheY-homologous receiver domain PXO_00070 SM00448 cheY-homologous receiver domain PXO_00070 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. PXO_00072 SM00937 PXO_00072 PXO_00073 SM00850 LytTr DNA-binding domain PXO_00086 SM00851 MGS-like domain PXO_00086 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain PXO_00088 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain PXO_00099 SM00899 PXO_00099 PXO_00103 SM00822 PXO_00103 PXO_00104 SM00841 Elongation factor P, C-terminal PXO_00104 SM01185 PXO_00104 PXO_00115 SM00758 PXO_00115 PXO_00121 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain PXO_00126 SM01130 PXO_00126 PXO_00130 SM00670 Large family of predicted nucleotide-binding domains PXO_00147 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain PXO_00149 SM00382 ATPases associated with a variety of cellular activities PXO_00158 SM00382 ATPases associated with a variety of cellular activities PXO_00160 SM01103 PXO_00160 PXO_00162 SM00257 Lysin motif PXO_00166 SM00463 Small MutS-related domain PXO_00171 SM01192 PXO_00171 PXO_00171 SM01193 PXO_00171 PXO_00177 SM00387 Histidine kinase-like ATPases PXO_00177 SM00433 TopoisomeraseII PXO_00183 SM01091 Transporter associated domain PXO_00189 SM00382 ATPases associated with a variety of cellular activities PXO_00191 SM00729 Elongator protein 3, MiaB family, Radical SAM PXO_00241 SM00448 cheY-homologous receiver domain PXO_00241 SM00862 Transcriptional regulatory protein, C terminal PXO_00243 SM00387 Histidine kinase-like ATPases PXO_00248 SM00331 Sigma factor PP2C-like phosphatases PXO_00248 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain PXO_00253 SM00240 Forkhead associated domain PXO_00259 SM00382 ATPases associated with a variety of cellular activities PXO_00259 SM01086 C-terminal, D2-small domain, of ClpB protein PXO_00277 SM01126 PXO_00277 PXO_00313 SM00387 Histidine kinase-like ATPases PXO_00331 SM01126 PXO_00331 PXO_00333 SM00382 ATPases associated with a variety of cellular activities PXO_00334 SM00382 ATPases associated with a variety of cellular activities PXO_00338 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain PXO_00343 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase PXO_00347 SM00859 Semialdehyde dehydrogenase, NAD binding domain PXO_00355 SM00840 PXO_00355 PXO_00358 SM00245 tail specific protease PXO_00382 SM00841 Elongation factor P, C-terminal PXO_00382 SM01185 PXO_00382 PXO_00384 SM00052 Putative diguanylate phosphodiesterase PXO_00384 SM00267 diguanylate cyclase PXO_00384 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PXO_00393 SM00382 ATPases associated with a variety of cellular activities PXO_00394 SM00382 ATPases associated with a variety of cellular activities PXO_00394 SM00487 DEAD-like helicases superfamily PXO_00394 SM00490 helicase superfamily c-terminal domain PXO_00399 SM00357 Cold shock protein domain PXO_00401 SM01322 PXO_00401 PXO_00403 SM00052 Putative diguanylate phosphodiesterase PXO_00403 SM00267 diguanylate cyclase PXO_00406 SM00822 PXO_00406 PXO_00410 SM00853 MutL C terminal dimerisation domain PXO_00410 SM01340 PXO_00410 PXO_00411 SM00646 PXO_00411 PXO_00420 SM00474 3'-5' exonuclease PXO_00422 SM00528 Domain in histone-like proteins of HNS family PXO_00429 SM01126 PXO_00429 PXO_00446 SM00729 Elongator protein 3, MiaB family, Radical SAM PXO_00451 SM00116 Domain in cystathionine beta-synthase and other proteins. PXO_00451 SM01091 Transporter associated domain PXO_00458 SM00382 ATPases associated with a variety of cellular activities PXO_00463 SM01230 PXO_00463 PXO_00464 SM01230 PXO_00464 PXO_00466 SM00267 diguanylate cyclase PXO_00466 SM00448 cheY-homologous receiver domain PXO_00475 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) PXO_00475 SM00091 PAS domain PXO_00475 SM00387 Histidine kinase-like ATPases PXO_00475 SM00388 His Kinase A (phosphoacceptor) domain PXO_00475 SM00448 cheY-homologous receiver domain PXO_00475 SM01079 PXO_00475 PXO_00476 SM00448 cheY-homologous receiver domain PXO_00476 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. PXO_00484 SM01126 PXO_00484 PXO_00486 SM00354 helix_turn _helix lactose operon repressor PXO_00524 SM01323 PXO_00524 PXO_00527 SM00344 helix_turn_helix ASNC type PXO_00535 SM00382 ATPases associated with a variety of cellular activities PXO_00538 SM00479 PXO_00538 PXO_00550 SM01126 PXO_00550 PXO_00582 SM00278 Helix-hairpin-helix DNA-binding motif class 1 PXO_00582 SM00465 GIY-YIG type nucleases (URI domain) PXO_00584 SM00226 Low molecular weight phosphatase family PXO_00588 SM00382 ATPases associated with a variety of cellular activities PXO_00591 SM00849 Metallo-beta-lactamase superfamily PXO_00592 SM01126 PXO_00592 PXO_00596 SM00382 ATPases associated with a variety of cellular activities PXO_00607 SM00382 ATPases associated with a variety of cellular activities PXO_00620 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. PXO_00620 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) PXO_00620 SM00091 PAS domain PXO_00620 SM00387 Histidine kinase-like ATPases PXO_00620 SM00388 His Kinase A (phosphoacceptor) domain PXO_00620 SM00448 cheY-homologous receiver domain PXO_00628 SM00226 Low molecular weight phosphatase family PXO_00636 SM00382 ATPases associated with a variety of cellular activities PXO_00649 SM00267 diguanylate cyclase PXO_00656 SM00382 ATPases associated with a variety of cellular activities PXO_00668 SM00347 helix_turn_helix multiple antibiotic resistance protein PXO_00674 SM00631 PXO_00674 PXO_00676 SM01217 PXO_00676 PXO_00678 SM00052 Putative diguanylate phosphodiesterase PXO_00678 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. PXO_00678 SM00267 diguanylate cyclase PXO_00696 SM00646 PXO_00696 PXO_00703 SM00869 Autotransporter beta-domain PXO_00708 SM00387 Histidine kinase-like ATPases PXO_00708 SM00388 His Kinase A (phosphoacceptor) domain PXO_00709 SM00421 helix_turn_helix, Lux Regulon PXO_00709 SM00448 cheY-homologous receiver domain PXO_00711 SM00869 Autotransporter beta-domain PXO_00716 SM00830 Chorismate mutase type II PXO_00720 SM00240 Forkhead associated domain PXO_00724 SM00345 helix_turn_helix gluconate operon transcriptional repressor PXO_00724 SM00866 PXO_00724 PXO_00734 SM00434 DNA Topoisomerase IV PXO_00738 SM00292 breast cancer carboxy-terminal domain PXO_00738 SM00532 Ligase N family PXO_00742 SM00771 ZipA, C-terminal domain (FtsZ-binding) PXO_00743 SM00968 SMC proteins Flexible Hinge Domain PXO_00754 SM00947 Carbonic anhydrase PXO_00762 SM00479 PXO_00762 PXO_00768 SM00981 PXO_00768 PXO_00775 SM00644 PXO_00775 PXO_00777 SM00450 Rhodanese Homology Domain PXO_00782 SM00478 endonuclease III PXO_00785 SM00947 Carbonic anhydrase PXO_00795 SM00316 Ribosomal protein S1-like RNA-binding domain PXO_00795 SM00732 Likely ribonuclease with RNase H fold. PXO_00797 SM00448 cheY-homologous receiver domain PXO_00798 SM00387 Histidine kinase-like ATPases PXO_00801 SM00014 Acid phosphatase homologues PXO_00848 SM01007 Class II Aldolase and Adducin N-terminal domain PXO_00865 SM00382 ATPases associated with a variety of cellular activities PXO_00868 SM01126 PXO_00868 PXO_00871 SM00363 S4 RNA-binding domain PXO_00876 SM00354 helix_turn _helix lactose operon repressor PXO_00891 SM00316 Ribosomal protein S1-like RNA-binding domain PXO_00892 SM00411 bacterial (prokaryotic) histone like domain PXO_00896 SM00822 PXO_00896 PXO_00905 SM00116 Domain in cystathionine beta-synthase and other proteins. PXO_00905 SM01240 PXO_00905 PXO_00916 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PXO_00918 SM00529 Helix-turn-helix diphteria tox regulatory element PXO_00920 SM00479 PXO_00920 PXO_00932 SM00450 Rhodanese Homology Domain PXO_00947 SM01126 PXO_00947 PXO_00952 SM01126 PXO_00952 PXO_00954 SM00073 Histidine Phosphotransfer domain PXO_00954 SM00260 Two component signalling adaptor domain PXO_00954 SM00387 Histidine kinase-like ATPases PXO_00954 SM01231 PXO_00954 PXO_00956 SM00448 cheY-homologous receiver domain PXO_00959 SM00382 ATPases associated with a variety of cellular activities PXO_00959 SM00962 SRP54-type protein, GTPase domain PXO_00964 SM00052 Putative diguanylate phosphodiesterase PXO_00964 SM00267 diguanylate cyclase PXO_00965 SM00267 diguanylate cyclase PXO_00967 SM00267 diguanylate cyclase PXO_00978 SM00382 ATPases associated with a variety of cellular activities PXO_00988 SM00822 PXO_00988 PXO_00989 SM00822 PXO_00989 PXO_00993 SM00382 ATPases associated with a variety of cellular activities PXO_00994 SM00448 cheY-homologous receiver domain PXO_00996 SM00421 helix_turn_helix, Lux Regulon PXO_00996 SM00448 cheY-homologous receiver domain PXO_01004 SM00047 Lysozyme subfamily 2 PXO_01014 SM00260 Two component signalling adaptor domain PXO_01014 SM00448 cheY-homologous receiver domain PXO_01015 SM00858 PXO_01015 PXO_01018 SM00387 Histidine kinase-like ATPases PXO_01019 SM00052 Putative diguanylate phosphodiesterase PXO_01019 SM00267 diguanylate cyclase PXO_01019 SM00448 cheY-homologous receiver domain PXO_01020 SM00091 PAS domain PXO_01020 SM00387 Histidine kinase-like ATPases PXO_01021 SM00052 Putative diguanylate phosphodiesterase PXO_01021 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) PXO_01021 SM00091 PAS domain PXO_01021 SM00267 diguanylate cyclase PXO_01024 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PXO_01030 SM00382 ATPases associated with a variety of cellular activities PXO_01030 SM01086 C-terminal, D2-small domain, of ClpB protein PXO_01031 SM00316 Ribosomal protein S1-like RNA-binding domain PXO_01038 SM00382 ATPases associated with a variety of cellular activities PXO_01038 SM00843 PXO_01038 PXO_01043 SM00382 ATPases associated with a variety of cellular activities PXO_01052 SM00562 PXO_01052 PXO_01054 SM00028 Tetratricopeptide repeats PXO_01057 SM00564 beta-propeller repeat PXO_01058 SM00382 ATPases associated with a variety of cellular activities PXO_01059 SM00852 Probable molybdopterin binding domain PXO_01069 SM01126 PXO_01069 PXO_01112 SM00967 RNA 2'-O ribose methyltransferase substrate binding PXO_01122 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. PXO_01135 SM00972 Spore Coat Protein U domain PXO_01138 SM00972 Spore Coat Protein U domain PXO_01140 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. PXO_01146 SM01172 PXO_01146 PXO_01147 SM00710 Parallel beta-helix repeats PXO_01147 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses PXO_01152 SM00434 DNA Topoisomerase IV PXO_01153 SM00342 helix_turn_helix, arabinose operon control protein PXO_01154 SM00347 helix_turn_helix multiple antibiotic resistance protein PXO_01171 SM00861 Transketolase, pyrimidine binding domain PXO_01172 SM00507 HNH nucleases PXO_01186 SM00271 DnaJ molecular chaperone homology domain PXO_01193 SM00382 ATPases associated with a variety of cellular activities PXO_01198 SM00861 Transketolase, pyrimidine binding domain PXO_01200 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. PXO_01202 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. PXO_01220 SM00382 ATPases associated with a variety of cellular activities PXO_01221 SM00345 helix_turn_helix gluconate operon transcriptional repressor PXO_01224 SM00984 UDP binding domain PXO_01228 SM00354 helix_turn _helix lactose operon repressor PXO_01232 SM01018 B12 binding domain PXO_01234 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor PXO_01238 SM00316 Ribosomal protein S1-like RNA-binding domain PXO_01238 SM00357 Cold shock protein domain PXO_01238 SM00955 PXO_01238 PXO_01247 SM00729 Elongator protein 3, MiaB family, Radical SAM PXO_01256 SM00257 Lysin motif PXO_01262 SM00859 Semialdehyde dehydrogenase, NAD binding domain PXO_01278 SM00052 Putative diguanylate phosphodiesterase PXO_01278 SM00267 diguanylate cyclase PXO_01278 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PXO_01284 SM00822 PXO_01284 PXO_01292 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region PXO_01293 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PXO_01302 SM00316 Ribosomal protein S1-like RNA-binding domain PXO_01302 SM00322 K homology RNA-binding domain PXO_01306 SM01387 PXO_01306 PXO_01307 SM00316 Ribosomal protein S1-like RNA-binding domain PXO_01307 SM00322 K homology RNA-binding domain PXO_01312 SM01001 AIR carboxylase PXO_01337 SM00530 Helix-turn-helix XRE-family like proteins PXO_01374 SM00487 DEAD-like helicases superfamily PXO_01374 SM00490 helicase superfamily c-terminal domain PXO_01383 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain PXO_01388 SM00873 B3/4 domain PXO_01388 SM00874 tRNA synthetase B5 domain PXO_01388 SM00896 Ferredoxin-fold anticodon binding domain PXO_01389 SM00411 bacterial (prokaryotic) histone like domain PXO_01390 SM00422 helix_turn_helix, mercury resistance PXO_01426 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) PXO_01426 SM00387 Histidine kinase-like ATPases PXO_01426 SM00388 His Kinase A (phosphoacceptor) domain PXO_01426 SM00448 cheY-homologous receiver domain PXO_01430 SM00478 endonuclease III PXO_01431 SM00382 ATPases associated with a variety of cellular activities PXO_01431 SM00962 SRP54-type protein, GTPase domain PXO_01431 SM00963 SRP54-type protein, helical bundle domain PXO_01433 SM00342 helix_turn_helix, arabinose operon control protein PXO_01439 SM01130 PXO_01439 PXO_01452 SM00944 Pro-kumamolisin, activation domain PXO_01473 SM01126 PXO_01473 PXO_01477 SM00852 Probable molybdopterin binding domain PXO_01489 SM01012 PXO_01489 PXO_01491 SM01126 PXO_01491 PXO_01494 SM01126 PXO_01494 PXO_01511 SM00984 UDP binding domain PXO_01514 SM00450 Rhodanese Homology Domain PXO_01515 SM00421 helix_turn_helix, Lux Regulon PXO_01515 SM00448 cheY-homologous receiver domain PXO_01517 SM00316 Ribosomal protein S1-like RNA-binding domain PXO_01518 SM00363 S4 RNA-binding domain PXO_01536 SM00533 DNA-binding domain of DNA mismatch repair MUTS family PXO_01536 SM00534 ATPase domain of DNA mismatch repair MUTS family PXO_01540 SM00382 ATPases associated with a variety of cellular activities PXO_01549 SM00834 Putative regulatory protein PXO_01557 SM00278 Helix-hairpin-helix DNA-binding motif class 1 PXO_01559 SM00382 ATPases associated with a variety of cellular activities PXO_01576 SM00341 Helicase and RNase D C-terminal PXO_01576 SM00487 DEAD-like helicases superfamily PXO_01576 SM00490 helicase superfamily c-terminal domain PXO_01576 SM00956 PXO_01576 PXO_01578 SM00382 ATPases associated with a variety of cellular activities PXO_01578 SM00487 DEAD-like helicases superfamily PXO_01578 SM00490 helicase superfamily c-terminal domain PXO_01578 SM00847 Helicase associated domain (HA2) Add an annotation PXO_01592 SM00954 Region found in RelA / SpoT proteins PXO_01597 SM00491 PXO_01597 PXO_01602 SM00448 cheY-homologous receiver domain PXO_01603 SM00448 cheY-homologous receiver domain PXO_01604 SM00260 Two component signalling adaptor domain PXO_01605 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PXO_01607 SM00073 Histidine Phosphotransfer domain PXO_01607 SM00260 Two component signalling adaptor domain PXO_01607 SM00387 Histidine kinase-like ATPases PXO_01607 SM00448 cheY-homologous receiver domain PXO_01607 SM01231 PXO_01607 PXO_01609 SM00260 Two component signalling adaptor domain PXO_01616 SM00327 von Willebrand factor (vWF) type A domain PXO_01617 SM01126 PXO_01617 PXO_01620 SM00369 Leucine-rich repeats, typical (most populated) subfamily PXO_01628 SM01149 PXO_01628 PXO_01637 SM00382 ATPases associated with a variety of cellular activities PXO_01638 SM00758 PXO_01638 PXO_01638 SM01217 PXO_01638 PXO_01642 SM00636 PXO_01642 PXO_01643 SM00812 Alpha-L-fucosidase PXO_01652 SM00244 prohibitin homologues PXO_01671 SM00116 Domain in cystathionine beta-synthase and other proteins. PXO_01687 SM00867 YceI-like domain PXO_01689 SM00867 YceI-like domain PXO_01690 SM00387 Histidine kinase-like ATPases PXO_01690 SM00388 His Kinase A (phosphoacceptor) domain PXO_01690 SM00448 cheY-homologous receiver domain PXO_01691 SM00387 Histidine kinase-like ATPases PXO_01691 SM00388 His Kinase A (phosphoacceptor) domain PXO_01691 SM00448 cheY-homologous receiver domain PXO_01692 SM00387 Histidine kinase-like ATPases PXO_01692 SM00388 His Kinase A (phosphoacceptor) domain PXO_01692 SM00448 cheY-homologous receiver domain PXO_01697 SM00812 Alpha-L-fucosidase PXO_01702 SM00530 Helix-turn-helix XRE-family like proteins PXO_01713 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. PXO_01714 SM00838 Elongation factor G C-terminus PXO_01717 SM00358 Double-stranded RNA binding motif PXO_01717 SM00535 Ribonuclease III family PXO_01720 SM00448 cheY-homologous receiver domain PXO_01723 SM01118 PXO_01723 PXO_01725 SM01126 PXO_01725 PXO_01731 SM00357 Cold shock protein domain PXO_01735 SM00487 DEAD-like helicases superfamily PXO_01735 SM00490 helicase superfamily c-terminal domain PXO_01741 SM00267 diguanylate cyclase PXO_01745 SM00869 Autotransporter beta-domain PXO_01746 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PXO_01807 SM01126 PXO_01807 PXO_01818 SM00382 ATPases associated with a variety of cellular activities PXO_01826 SM00967 RNA 2'-O ribose methyltransferase substrate binding PXO_01827 SM01126 PXO_01827 PXO_01843 SM00869 Autotransporter beta-domain PXO_01844 SM01126 PXO_01844 PXO_01852 SM00528 Domain in histone-like proteins of HNS family PXO_01857 SM01126 PXO_01857 PXO_01859 SM00642 Alpha-amylase domain PXO_01861 SM01126 PXO_01861 PXO_01870 SM01126 PXO_01870 PXO_01887 SM00316 Ribosomal protein S1-like RNA-binding domain PXO_01899 SM00977 TilS substrate C-terminal domain PXO_01900 SM00098 Alkaline phosphatase homologues PXO_01914 SM01126 PXO_01914 PXO_01918 SM01126 PXO_01918 PXO_01925 SM00855 Phosphoglycerate mutase family PXO_01943 SM00382 ATPases associated with a variety of cellular activities PXO_01951 SM00862 Transcriptional regulatory protein, C terminal PXO_01953 SM00342 helix_turn_helix, arabinose operon control protein PXO_01963 SM01230 PXO_01963 PXO_01966 SM01126 PXO_01966 PXO_01978 SM00382 ATPases associated with a variety of cellular activities PXO_01981 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain PXO_01988 SM00411 bacterial (prokaryotic) histone like domain PXO_01993 SM00382 ATPases associated with a variety of cellular activities PXO_02001 SM00732 Likely ribonuclease with RNase H fold. PXO_02019 SM00267 diguanylate cyclase PXO_02023 SM01126 PXO_02023 PXO_02051 SM00382 ATPases associated with a variety of cellular activities PXO_02051 SM01086 C-terminal, D2-small domain, of ClpB protein PXO_02066 SM00487 DEAD-like helicases superfamily PXO_02066 SM00490 helicase superfamily c-terminal domain PXO_02070 SM00487 DEAD-like helicases superfamily PXO_02078 SM00220 Serine/Threonine protein kinases, catalytic domain PXO_02083 SM00855 Phosphoglycerate mutase family PXO_02087 SM00966 SpoVT / AbrB like domain PXO_02092 SM00481 DNA polymerase alpha chain like domain PXO_02093 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. PXO_02106 SM00091 PAS domain PXO_02106 SM00342 helix_turn_helix, arabinose operon control protein PXO_02109 SM01060 PXO_02109 PXO_02120 SM00506 Appr-1"-p processing enzyme PXO_02127 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. PXO_02127 SM00387 Histidine kinase-like ATPases PXO_02143 SM00382 ATPases associated with a variety of cellular activities PXO_02143 SM00962 SRP54-type protein, GTPase domain PXO_02143 SM00963 SRP54-type protein, helical bundle domain PXO_02152 SM00363 S4 RNA-binding domain PXO_02158 SM00382 ATPases associated with a variety of cellular activities PXO_02158 SM01086 C-terminal, D2-small domain, of ClpB protein PXO_02196 SM00422 helix_turn_helix, mercury resistance PXO_02201 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. PXO_02203 SM00849 Metallo-beta-lactamase superfamily PXO_02209 SM00421 helix_turn_helix, Lux Regulon PXO_02217 SM00924 MgtE intracellular N domain PXO_02228 SM00382 ATPases associated with a variety of cellular activities PXO_02232 SM00116 Domain in cystathionine beta-synthase and other proteins. PXO_02260 SM00813 Alpha-L-arabinofuranosidase C-terminus PXO_02303 SM00448 cheY-homologous receiver domain PXO_02303 SM00862 Transcriptional regulatory protein, C terminal PXO_02305 SM00387 Histidine kinase-like ATPases PXO_02305 SM00388 His Kinase A (phosphoacceptor) domain PXO_02306 SM01126 PXO_02306 PXO_02308 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PXO_02317 SM00849 Metallo-beta-lactamase superfamily PXO_02320 SM00382 ATPases associated with a variety of cellular activities PXO_02325 SM00387 Histidine kinase-like ATPases PXO_02325 SM00388 His Kinase A (phosphoacceptor) domain PXO_02326 SM00448 cheY-homologous receiver domain PXO_02326 SM00862 Transcriptional regulatory protein, C terminal PXO_02341 SM00861 Transketolase, pyrimidine binding domain PXO_02344 SM00028 Tetratricopeptide repeats PXO_02344 SM00327 von Willebrand factor (vWF) type A domain PXO_02345 SM00327 von Willebrand factor (vWF) type A domain PXO_02348 SM00382 ATPases associated with a variety of cellular activities PXO_02351 SM00965 Secretin and TonB N terminus short domain PXO_02362 SM00487 DEAD-like helicases superfamily PXO_02362 SM00490 helicase superfamily c-terminal domain PXO_02364 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. PXO_02364 SM00954 Region found in RelA / SpoT proteins PXO_02367 SM00072 Guanylate kinase homologues. PXO_02372 SM00729 Elongator protein 3, MiaB family, Radical SAM PXO_02378 SM01011 Aminopeptidase P, N-terminal domain PXO_02395 SM00919 Malic enzyme, NAD binding domain PXO_02395 SM01274 PXO_02395 PXO_02398 SM00387 Histidine kinase-like ATPases PXO_02398 SM00388 His Kinase A (phosphoacceptor) domain PXO_02398 SM00448 cheY-homologous receiver domain PXO_02404 SM00421 helix_turn_helix, Lux Regulon PXO_02404 SM00448 cheY-homologous receiver domain PXO_02406 SM00387 Histidine kinase-like ATPases PXO_02406 SM00388 His Kinase A (phosphoacceptor) domain PXO_02407 SM00448 cheY-homologous receiver domain PXO_02407 SM00862 Transcriptional regulatory protein, C terminal PXO_02411 SM00822 PXO_02411 PXO_02412 SM00354 helix_turn _helix lactose operon repressor PXO_02416 SM00642 Alpha-amylase domain PXO_02418 SM01154 PXO_02418 PXO_02424 SM00450 Rhodanese Homology Domain PXO_02436 SM00382 ATPases associated with a variety of cellular activities PXO_02438 SM00460 Transglutaminase/protease-like homologues PXO_02441 SM00493 PXO_02441 PXO_02443 SM00382 ATPases associated with a variety of cellular activities PXO_02449 SM00729 Elongator protein 3, MiaB family, Radical SAM PXO_02450 SM00849 Metallo-beta-lactamase superfamily PXO_02455 SM01126 PXO_02455 PXO_02467 SM00331 Sigma factor PP2C-like phosphatases PXO_02467 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain PXO_02468 SM00479 PXO_02468 PXO_02472 SM00257 Lysin motif PXO_02474 SM00411 bacterial (prokaryotic) histone like domain PXO_02475 SM00382 ATPases associated with a variety of cellular activities PXO_02475 SM00464 Found in ATP-dependent protease La (LON) PXO_02476 SM00382 ATPases associated with a variety of cellular activities PXO_02476 SM00994 ClpX C4-type zinc finger PXO_02476 SM01086 C-terminal, D2-small domain, of ClpB protein PXO_02485 SM01329 PXO_02485 PXO_02486 SM01126 PXO_02486 PXO_02492 SM00448 cheY-homologous receiver domain PXO_02492 SM00862 Transcriptional regulatory protein, C terminal PXO_02493 SM00387 Histidine kinase-like ATPases PXO_02493 SM00388 His Kinase A (phosphoacceptor) domain PXO_02498 SM00014 Acid phosphatase homologues PXO_02509 SM00855 Phosphoglycerate mutase family PXO_02513 SM00829 Enoylreductase PXO_02515 SM00382 ATPases associated with a variety of cellular activities PXO_02525 SM00829 Enoylreductase PXO_02547 SM00838 Elongation factor G C-terminus PXO_02567 SM01126 PXO_02567 PXO_02578 SM01126 PXO_02578 PXO_02586 SM00464 Found in ATP-dependent protease La (LON) PXO_02591 SM01126 PXO_02591 PXO_02593 SM01126 PXO_02593 PXO_02601 SM00342 helix_turn_helix, arabinose operon control protein PXO_02602 SM00862 Transcriptional regulatory protein, C terminal PXO_02609 SM00917 LeuA allosteric (dimerisation) domain PXO_02610 SM01329 PXO_02610 PXO_02615 SM00267 diguanylate cyclase PXO_02617 SM01126 PXO_02617 PXO_02633 SM00788 Adenylosuccinate synthetase PXO_02635 SM00244 prohibitin homologues PXO_02636 SM00244 prohibitin homologues PXO_02637 SM00448 cheY-homologous receiver domain PXO_02638 SM00271 DnaJ molecular chaperone homology domain PXO_02650 SM00656 PXO_02650 PXO_02669 SM01211 PXO_02669 PXO_02675 SM00382 ATPases associated with a variety of cellular activities PXO_02688 SM00345 helix_turn_helix gluconate operon transcriptional repressor PXO_02688 SM00866 PXO_02688 PXO_02701 SM00487 DEAD-like helicases superfamily PXO_02702 SM01126 PXO_02702 PXO_02708 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. PXO_02709 SM00822 PXO_02709 PXO_02711 SM00825 Beta-ketoacyl synthase PXO_02717 SM00382 ATPases associated with a variety of cellular activities PXO_02746 SM00564 beta-propeller repeat PXO_02752 SM00091 PAS domain PXO_02752 SM00387 Histidine kinase-like ATPases PXO_02752 SM00388 His Kinase A (phosphoacceptor) domain PXO_02752 SM00448 cheY-homologous receiver domain PXO_02755 SM00346 helix_turn_helix isocitrate lyase regulation PXO_02759 SM01126 PXO_02759 PXO_02764 SM00563 Phosphate acyltransferases PXO_02791 SM00382 ATPases associated with a variety of cellular activities PXO_02797 SM00530 Helix-turn-helix XRE-family like proteins PXO_02799 SM00382 ATPases associated with a variety of cellular activities PXO_02803 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. PXO_02814 SM01004 Delta-aminolevulinic acid dehydratase PXO_02818 SM00477 DNA/RNA non-specific endonuclease PXO_02818 SM00892 DNA/RNA non-specific endonuclease PXO_02825 SM00491 PXO_02825 PXO_02827 SM01126 PXO_02827 PXO_02830 SM01060 PXO_02830 PXO_02831 SM00248 ankyrin repeats PXO_02836 SM00448 cheY-homologous receiver domain PXO_02836 SM00862 Transcriptional regulatory protein, C terminal PXO_02837 SM00387 Histidine kinase-like ATPases PXO_02837 SM00388 His Kinase A (phosphoacceptor) domain PXO_02855 SM00849 Metallo-beta-lactamase superfamily PXO_02864 SM01060 PXO_02864 PXO_02874 SM00729 Elongator protein 3, MiaB family, Radical SAM PXO_02874 SM00876 Biotin and Thiamin Synthesis associated domain PXO_02878 SM00822 PXO_02878 PXO_02883 SM00825 Beta-ketoacyl synthase PXO_02885 SM00248 ankyrin repeats PXO_02891 SM00116 Domain in cystathionine beta-synthase and other proteins. PXO_02891 SM00924 MgtE intracellular N domain PXO_02893 SM00881 CoA binding domain PXO_02908 SM00998 Adenylosuccinate lyase C-terminus PXO_02912 SM00346 helix_turn_helix isocitrate lyase regulation PXO_02913 SM00090 RIO-like kinase PXO_02918 SM00836 DALR anticodon binding domain PXO_02918 SM01016 Arginyl tRNA synthetase N terminal dom PXO_02924 SM01259 PXO_02924 PXO_02929 SM00470 ParB-like nuclease domain PXO_02943 SM00073 Histidine Phosphotransfer domain PXO_02943 SM00387 Histidine kinase-like ATPases PXO_02943 SM00388 His Kinase A (phosphoacceptor) domain PXO_02943 SM00448 cheY-homologous receiver domain PXO_02944 SM00052 Putative diguanylate phosphodiesterase PXO_02944 SM00267 diguanylate cyclase PXO_02944 SM00448 cheY-homologous receiver domain PXO_02956 SM00563 Phosphate acyltransferases PXO_02964 SM01209 PXO_02964 PXO_02964 SM01210 PXO_02964 PXO_02965 SM00798 AICARFT/IMPCHase bienzyme PXO_02965 SM00851 MGS-like domain PXO_02971 SM01126 PXO_02971 PXO_02976 SM00912 haemagglutination activity domain PXO_02986 SM00382 ATPases associated with a variety of cellular activities PXO_02993 SM01126 PXO_02993 PXO_02998 SM00530 Helix-turn-helix XRE-family like proteins PXO_03004 SM00878 Biotin carboxylase C-terminal domain PXO_03012 SM01126 PXO_03012 PXO_03020 SM00382 ATPases associated with a variety of cellular activities PXO_03020 SM00448 cheY-homologous receiver domain PXO_03021 SM00448 cheY-homologous receiver domain PXO_03023 SM00138 Methyltransferase, chemotaxis proteins PXO_03032 SM00387 Histidine kinase-like ATPases PXO_03033 SM00448 cheY-homologous receiver domain PXO_03034 SM00850 LytTr DNA-binding domain PXO_03047 SM00729 Elongator protein 3, MiaB family, Radical SAM PXO_03048 SM00986 Uracil DNA glycosylase superfamily PXO_03048 SM00987 UreE urease accessory protein, C-terminal domain PXO_03050 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. PXO_03054 SM00382 ATPases associated with a variety of cellular activities PXO_03063 SM00448 cheY-homologous receiver domain PXO_03063 SM00862 Transcriptional regulatory protein, C terminal PXO_03064 SM00387 Histidine kinase-like ATPases PXO_03064 SM00388 His Kinase A (phosphoacceptor) domain PXO_03072 SM00344 helix_turn_helix ASNC type PXO_03074 SM01005 Alanine racemase, C-terminal domain PXO_03078 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) PXO_03078 SM00091 PAS domain PXO_03078 SM00387 Histidine kinase-like ATPases PXO_03078 SM00388 His Kinase A (phosphoacceptor) domain PXO_03078 SM00448 cheY-homologous receiver domain PXO_03093 SM00382 ATPases associated with a variety of cellular activities PXO_03093 SM00930 PXO_03093 PXO_03113 SM00382 ATPases associated with a variety of cellular activities PXO_03115 SM00830 Chorismate mutase type II PXO_03119 SM01126 PXO_03119 PXO_03137 SM00825 Beta-ketoacyl synthase PXO_03142 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. PXO_03147 SM00487 DEAD-like helicases superfamily PXO_03147 SM00490 helicase superfamily c-terminal domain PXO_03155 SM00116 Domain in cystathionine beta-synthase and other proteins. PXO_03166 SM00382 ATPases associated with a variety of cellular activities PXO_03167 SM00893 Electron transfer flavoprotein domain PXO_03168 SM00893 Electron transfer flavoprotein domain PXO_03175 SM00882 Coenzyme A transferase PXO_03176 SM00882 Coenzyme A transferase PXO_03182 SM00382 ATPases associated with a variety of cellular activities PXO_03185 SM00528 Domain in histone-like proteins of HNS family PXO_03200 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain PXO_03200 SM01232 PXO_03200 PXO_03202 SM01126 PXO_03202 PXO_03211 SM00382 ATPases associated with a variety of cellular activities PXO_03214 SM01126 PXO_03214 PXO_03228 SM01126 PXO_03228 PXO_03233 SM00155 Phospholipase D. Active site motifs. PXO_03258 SM00421 helix_turn_helix, Lux Regulon PXO_03258 SM00448 cheY-homologous receiver domain PXO_03266 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain PXO_03270 SM00487 DEAD-like helicases superfamily PXO_03270 SM00490 helicase superfamily c-terminal domain PXO_03270 SM00847 Helicase associated domain (HA2) Add an annotation PXO_03275 SM00829 Enoylreductase PXO_03286 SM00344 helix_turn_helix ASNC type PXO_03296 SM00829 Enoylreductase PXO_03310 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. PXO_03310 SM00091 PAS domain PXO_03315 SM01126 PXO_03315 PXO_03333 SM00487 DEAD-like helicases superfamily PXO_03333 SM00490 helicase superfamily c-terminal domain PXO_03338 SM01126 PXO_03338 PXO_03342 SM00382 ATPases associated with a variety of cellular activities PXO_03353 SM01126 PXO_03353 PXO_03359 SM00487 DEAD-like helicases superfamily PXO_03359 SM00490 helicase superfamily c-terminal domain PXO_03367 SM01126 PXO_03367 PXO_03371 SM00642 Alpha-amylase domain PXO_03372 SM00642 Alpha-amylase domain PXO_03374 SM00642 Alpha-amylase domain PXO_03375 SM00642 Alpha-amylase domain PXO_03378 SM00267 diguanylate cyclase PXO_03396 SM00382 ATPases associated with a variety of cellular activities PXO_03420 SM00369 Leucine-rich repeats, typical (most populated) subfamily PXO_03424 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. PXO_03442 SM01126 PXO_03442 PXO_03470 SM00155 Phospholipase D. Active site motifs. PXO_03477 SM00028 Tetratricopeptide repeats PXO_03480 SM00387 Histidine kinase-like ATPases PXO_03480 SM00433 TopoisomeraseII PXO_03482 SM00480 DNA polymerase III beta subunit PXO_03483 SM00382 ATPases associated with a variety of cellular activities PXO_03483 SM00760 Bacterial dnaA protein helix-turn-helix domain PXO_03488 SM00028 Tetratricopeptide repeats PXO_03490 SM00014 Acid phosphatase homologues PXO_03534 SM00347 helix_turn_helix multiple antibiotic resistance protein PXO_03547 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. PXO_03547 SM00245 tail specific protease PXO_03554 SM00237 Domains in Na-Ca exchangers and integrin-beta4 PXO_03554 SM00736 Dystroglycan-type cadherin-like domains. PXO_03554 SM00869 Autotransporter beta-domain PXO_03560 SM01126 PXO_03560 PXO_03564 SM00382 ATPases associated with a variety of cellular activities PXO_03564 SM00448 cheY-homologous receiver domain PXO_03565 SM00387 Histidine kinase-like ATPases PXO_03565 SM00388 His Kinase A (phosphoacceptor) domain PXO_03567 SM00938 Nitrogen regulatory protein P-II PXO_03568 SM01230 PXO_03568 PXO_03571 SM00829 Enoylreductase PXO_03573 SM00028 Tetratricopeptide repeats PXO_03575 SM00563 Phosphate acyltransferases PXO_03577 SM00155 Phospholipase D. Active site motifs. PXO_03578 SM00867 YceI-like domain PXO_03579 SM00855 Phosphoglycerate mutase family PXO_03585 SM00530 Helix-turn-helix XRE-family like proteins PXO_03591 SM00382 ATPases associated with a variety of cellular activities PXO_03594 SM00382 ATPases associated with a variety of cellular activities PXO_03597 SM01126 PXO_03597 PXO_03600 SM01126 PXO_03600 PXO_03607 SM00563 Phosphate acyltransferases PXO_03609 SM00354 helix_turn _helix lactose operon repressor PXO_03614 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family PXO_03623 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. PXO_03623 SM00388 His Kinase A (phosphoacceptor) domain PXO_03636 SM01228 PXO_03636 PXO_03653 SM01126 PXO_03653 PXO_03655 SM00938 Nitrogen regulatory protein P-II PXO_03657 SM00382 ATPases associated with a variety of cellular activities PXO_03664 SM01126 PXO_03664 PXO_03667 SM00642 Alpha-amylase domain PXO_03668 SM00642 Alpha-amylase domain PXO_03669 SM00642 Alpha-amylase domain PXO_03674 SM00354 helix_turn _helix lactose operon repressor PXO_03681 SM00944 Pro-kumamolisin, activation domain PXO_03695 SM01126 PXO_03695 PXO_03704 SM00883 Chaperonin 10 Kd subunit PXO_03712 SM00986 Uracil DNA glycosylase superfamily PXO_03712 SM00987 UreE urease accessory protein, C-terminal domain PXO_03713 SM00448 cheY-homologous receiver domain PXO_03715 SM00382 ATPases associated with a variety of cellular activities PXO_03716 SM00487 DEAD-like helicases superfamily PXO_03716 SM00490 helicase superfamily c-terminal domain PXO_03719 SM00357 Cold shock protein domain PXO_03719 SM00382 ATPases associated with a variety of cellular activities PXO_03719 SM00959 Rho termination factor, N-terminal domain PXO_03735 SM00563 Phosphate acyltransferases PXO_03762 SM00388 His Kinase A (phosphoacceptor) domain PXO_03763 SM00387 Histidine kinase-like ATPases PXO_03764 SM00448 cheY-homologous receiver domain PXO_03764 SM00862 Transcriptional regulatory protein, C terminal PXO_03780 SM01126 PXO_03780 PXO_03803 SM00878 Biotin carboxylase C-terminal domain PXO_03818 SM00833 Cobalamin synthesis protein cobW C-terminal domain PXO_03829 SM00836 DALR anticodon binding domain PXO_03832 SM00382 ATPases associated with a variety of cellular activities PXO_03849 SM00354 helix_turn _helix lactose operon repressor PXO_03854 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain PXO_03856 SM00758 PXO_03856 PXO_03856 SM01217 PXO_03856 PXO_03861 SM00633 Glycosyl hydrolase family 10 PXO_03863 SM00633 Glycosyl hydrolase family 10 PXO_03877 SM00052 Putative diguanylate phosphodiesterase PXO_03887 SM00347 helix_turn_helix multiple antibiotic resistance protein PXO_03892 SM00530 Helix-turn-helix XRE-family like proteins PXO_03894 SM01126 PXO_03894 PXO_03903 SM00530 Helix-turn-helix XRE-family like proteins PXO_03910 SM00867 YceI-like domain PXO_03914 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PXO_03914 SM00331 Sigma factor PP2C-like phosphatases PXO_03934 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs PXO_03934 SM00474 3'-5' exonuclease PXO_03934 SM00475 5'-3' exonuclease PXO_03934 SM00482 DNA polymerase A domain PXO_03945 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. PXO_03946 SM00347 helix_turn_helix multiple antibiotic resistance protein PXO_03965 SM00382 ATPases associated with a variety of cellular activities PXO_03965 SM00448 cheY-homologous receiver domain PXO_03966 SM00387 Histidine kinase-like ATPases PXO_03966 SM00388 His Kinase A (phosphoacceptor) domain PXO_03971 SM00450 Rhodanese Homology Domain PXO_03974 SM01126 PXO_03974 PXO_03976 SM01126 PXO_03976 PXO_03979 SM01150 PXO_03979 PXO_04002 SM00903 Flavin reductase like domain PXO_04006 SM00100 Cyclic nucleotide-monophosphate binding domain PXO_04006 SM00419 helix_turn_helix, cAMP Regulatory protein PXO_04014 SM01126 PXO_04014 PXO_04038 SM00487 DEAD-like helicases superfamily PXO_04038 SM00490 helicase superfamily c-terminal domain PXO_04049 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain PXO_04049 SM00437 Bacterial DNA topoisomerase I DNA-binding domain PXO_04049 SM00493 PXO_04049 PXO_04054 SM00257 Lysin motif PXO_04081 SM01126 PXO_04081 PXO_04085 SM00382 ATPases associated with a variety of cellular activities PXO_04097 SM00400 zinc finger PXO_04097 SM00493 PXO_04097 PXO_04097 SM00766 DNA primase DnaG DnaB-binding PXO_04103 SM00905 Dihydroneopterin aldolase PXO_04104 SM01217 PXO_04104 PXO_04109 SM01126 PXO_04109 PXO_04138 SM00448 cheY-homologous receiver domain PXO_04138 SM00850 LytTr DNA-binding domain PXO_04147 SM00267 diguanylate cyclase PXO_04151 SM00637 PXO_04151 PXO_04155 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. PXO_04155 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) PXO_04155 SM00091 PAS domain PXO_04155 SM00267 diguanylate cyclase PXO_04157 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. PXO_04196 SM00046 Diacylglycerol kinase catalytic domain (presumed) PXO_04199 SM00271 DnaJ molecular chaperone homology domain PXO_04217 SM00347 helix_turn_helix multiple antibiotic resistance protein PXO_04223 SM00861 Transketolase, pyrimidine binding domain PXO_04224 SM01126 PXO_04224 PXO_04245 SM00644 PXO_04245 PXO_04247 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain PXO_04252 SM00257 Lysin motif PXO_04262 SM00268 Actin PXO_04275 SM00267 diguanylate cyclase PXO_04276 SM01263 PXO_04276 PXO_04279 SM00382 ATPases associated with a variety of cellular activities PXO_04279 SM01086 C-terminal, D2-small domain, of ClpB protein PXO_04285 SM00936 Penicillin-binding protein 5, C-terminal domain PXO_04289 SM00729 Elongator protein 3, MiaB family, Radical SAM PXO_04290 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. PXO_04290 SM00245 tail specific protease PXO_04301 SM01350 PXO_04301 PXO_04303 SM00749 bacterial OsmY and nodulation domain PXO_04304 SM00387 Histidine kinase-like ATPases PXO_04304 SM00388 His Kinase A (phosphoacceptor) domain PXO_04305 SM00448 cheY-homologous receiver domain PXO_04306 SM00387 Histidine kinase-like ATPases PXO_04306 SM00388 His Kinase A (phosphoacceptor) domain PXO_04306 SM00448 cheY-homologous receiver domain PXO_04320 SM00345 helix_turn_helix gluconate operon transcriptional repressor PXO_04320 SM00866 PXO_04320 PXO_04322 SM00354 helix_turn _helix lactose operon repressor PXO_04330 SM01126 PXO_04330 PXO_04338 SM00996 S-adenosyl-L-homocysteine hydrolase PXO_04338 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain PXO_04350 SM00829 Enoylreductase PXO_04358 SM00957 SecA DEAD-like domain PXO_04358 SM00958 SecA preprotein cross-linking domain PXO_04362 SM00864 Tubulin/FtsZ family, GTPase domain PXO_04362 SM00865 Tubulin/FtsZ family, C-terminal domain PXO_04363 SM00842 Cell division protein FtsA PXO_04383 SM00448 cheY-homologous receiver domain PXO_04383 SM00862 Transcriptional regulatory protein, C terminal PXO_04384 SM00387 Histidine kinase-like ATPases PXO_04384 SM00388 His Kinase A (phosphoacceptor) domain PXO_04409 SM00382 ATPases associated with a variety of cellular activities PXO_04416 SM00829 Enoylreductase PXO_04421 SM00448 cheY-homologous receiver domain PXO_04421 SM00862 Transcriptional regulatory protein, C terminal PXO_04422 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PXO_04422 SM00387 Histidine kinase-like ATPases PXO_04422 SM00388 His Kinase A (phosphoacceptor) domain PXO_04427 SM00387 Histidine kinase-like ATPases PXO_04427 SM00388 His Kinase A (phosphoacceptor) domain PXO_04440 SM01126 PXO_04440 PXO_04456 SM00478 endonuclease III PXO_04459 SM00421 helix_turn_helix, Lux Regulon PXO_04459 SM00448 cheY-homologous receiver domain PXO_04467 SM00387 Histidine kinase-like ATPases PXO_04467 SM00388 His Kinase A (phosphoacceptor) domain PXO_04469 SM00448 cheY-homologous receiver domain PXO_04469 SM00862 Transcriptional regulatory protein, C terminal PXO_04477 SM00382 ATPases associated with a variety of cellular activities PXO_04485 SM00990 PXO_04485 PXO_04496 SM00662 RNA polymerases D PXO_04497 SM00363 S4 RNA-binding domain PXO_04497 SM01390 PXO_04497 PXO_04510 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. PXO_04511 SM01374 PXO_04511 PXO_04515 SM00322 K homology RNA-binding domain PXO_04518 SM01382 PXO_04518 PXO_04518 SM01383 PXO_04518 PXO_04522 SM01403 PXO_04522 PXO_04525 SM00838 Elongation factor G C-terminus PXO_04525 SM00889 Elongation factor G, domain IV PXO_04529 SM00663 RNA polymerase I subunit A N-terminus PXO_04534 SM00649 Ribosomal protein L11/L12 PXO_04536 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. PXO_04536 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. PXO_04542 SM01400 PXO_04542 PXO_04546 SM00028 Tetratricopeptide repeats PXO_04548 SM00937 PXO_04548 PXO_04549 SM00028 Tetratricopeptide repeats PXO_04550 SM00852 Probable molybdopterin binding domain PXO_04576 SM01002 Alanine dehydrogenase/PNT, C-terminal domain PXO_04576 SM01003 Alanine dehydrogenase/PNT, N-terminal domain PXO_04579 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs PXO_04579 SM00475 5'-3' exonuclease PXO_04595 SM01126 PXO_04595 PXO_04600 SM00421 helix_turn_helix, Lux Regulon PXO_04605 SM00387 Histidine kinase-like ATPases PXO_04605 SM00448 cheY-homologous receiver domain PXO_04606 SM00448 cheY-homologous receiver domain PXO_04625 SM00347 helix_turn_helix multiple antibiotic resistance protein PXO_04634 SM01126 PXO_04634 PXO_04645 SM00650 Ribosomal RNA adenine dimethylases PXO_04658 SM00387 Histidine kinase-like ATPases PXO_04658 SM00388 His Kinase A (phosphoacceptor) domain PXO_04659 SM00448 cheY-homologous receiver domain PXO_04659 SM00862 Transcriptional regulatory protein, C terminal PXO_04661 SM00382 ATPases associated with a variety of cellular activities PXO_04730 SM00645 Papain family cysteine protease PXO_04739 SM00645 Papain family cysteine protease PXO_04742 SM00387 Histidine kinase-like ATPases PXO_04742 SM00388 His Kinase A (phosphoacceptor) domain PXO_04745 SM00487 DEAD-like helicases superfamily PXO_04745 SM00490 helicase superfamily c-terminal domain PXO_04745 SM00982 PXO_04745 PXO_04745 SM01058 CarD-like/TRCF domain PXO_04751 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PXO_04751 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PXO_04752 SM00260 Two component signalling adaptor domain PXO_04753 SM00052 Putative diguanylate phosphodiesterase PXO_04753 SM00448 cheY-homologous receiver domain PXO_04754 SM00138 Methyltransferase, chemotaxis proteins PXO_04755 SM00448 cheY-homologous receiver domain PXO_04756 SM00155 Phospholipase D. Active site motifs. PXO_04761 SM00855 Phosphoglycerate mutase family PXO_04780 SM00342 helix_turn_helix, arabinose operon control protein PXO_04780 SM00478 endonuclease III PXO_04780 SM01009 AlkA N-terminal domain PXO_04785 SM00829 Enoylreductase PXO_04812 SM00357 Cold shock protein domain PXO_04825 SM00487 DEAD-like helicases superfamily PXO_04825 SM00490 helicase superfamily c-terminal domain PXO_04826 SM00052 Putative diguanylate phosphodiesterase PXO_04826 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) PXO_04826 SM00091 PAS domain PXO_04826 SM00267 diguanylate cyclase PXO_04827 SM00363 S4 RNA-binding domain PXO_04835 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PXO_04835 SM00387 Histidine kinase-like ATPases PXO_04835 SM00388 His Kinase A (phosphoacceptor) domain PXO_04836 SM00448 cheY-homologous receiver domain PXO_04836 SM00862 Transcriptional regulatory protein, C terminal PXO_04842 SM00382 ATPases associated with a variety of cellular activities PXO_04878 SM00881 CoA binding domain PXO_04880 SM00387 Histidine kinase-like ATPases PXO_04880 SM00388 His Kinase A (phosphoacceptor) domain PXO_04881 SM00382 ATPases associated with a variety of cellular activities PXO_04881 SM00448 cheY-homologous receiver domain PXO_05468 SM01126 PXO_05468 PXO_05648 SM00481 DNA polymerase alpha chain like domain PXO_05680 SM01160 PXO_05680 PXO_05707 SM01126 PXO_05707 PXO_05793 SM00729 Elongator protein 3, MiaB family, Radical SAM PXO_05836 SM01126 PXO_05836 PXO_06032 SM01126 PXO_06032 PXO_06059 SM01126 PXO_06059 PXO_06062 SM00382 ATPases associated with a variety of cellular activities PXO_06079 SM01007 Class II Aldolase and Adducin N-terminal domain PXO_06090 SM00450 Rhodanese Homology Domain PXO_06092 SM01126 PXO_06092 PXO_06107 SM00852 Probable molybdopterin binding domain PXO_06108 SM00382 ATPases associated with a variety of cellular activities PXO_06109 SM00564 beta-propeller repeat PXO_06112 SM00028 Tetratricopeptide repeats PXO_06114 SM00562 PXO_06114 PXO_06123 SM00382 ATPases associated with a variety of cellular activities PXO_06128 SM00382 ATPases associated with a variety of cellular activities PXO_06128 SM00843 PXO_06128 PXO_06135 SM00316 Ribosomal protein S1-like RNA-binding domain PXO_06136 SM00382 ATPases associated with a variety of cellular activities PXO_06136 SM01086 C-terminal, D2-small domain, of ClpB protein PXO_06142 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PXO_06145 SM00052 Putative diguanylate phosphodiesterase PXO_06145 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) PXO_06145 SM00091 PAS domain PXO_06145 SM00267 diguanylate cyclase PXO_06146 SM00091 PAS domain PXO_06146 SM00387 Histidine kinase-like ATPases PXO_06147 SM00052 Putative diguanylate phosphodiesterase PXO_06147 SM00267 diguanylate cyclase PXO_06147 SM00448 cheY-homologous receiver domain PXO_06148 SM00387 Histidine kinase-like ATPases PXO_06151 SM00858 PXO_06151 PXO_06152 SM00260 Two component signalling adaptor domain PXO_06152 SM00448 cheY-homologous receiver domain PXO_06162 SM00047 Lysozyme subfamily 2 PXO_06170 SM00421 helix_turn_helix, Lux Regulon PXO_06170 SM00448 cheY-homologous receiver domain PXO_06172 SM00448 cheY-homologous receiver domain PXO_06173 SM00382 ATPases associated with a variety of cellular activities PXO_06177 SM00822 PXO_06177 PXO_06178 SM00822 PXO_06178 PXO_06188 SM00382 ATPases associated with a variety of cellular activities PXO_06199 SM00267 diguanylate cyclase PXO_06201 SM00267 diguanylate cyclase PXO_06202 SM00052 Putative diguanylate phosphodiesterase PXO_06202 SM00267 diguanylate cyclase PXO_06207 SM00382 ATPases associated with a variety of cellular activities PXO_06207 SM00962 SRP54-type protein, GTPase domain PXO_06210 SM00448 cheY-homologous receiver domain PXO_06212 SM00073 Histidine Phosphotransfer domain PXO_06212 SM00260 Two component signalling adaptor domain PXO_06212 SM00387 Histidine kinase-like ATPases PXO_06212 SM01231 PXO_06212 PXO_06214 SM01126 PXO_06214 PXO_06219 SM01126 PXO_06219 PXO_06250 SM01126 PXO_06250