locus-tag	class	description
BXU03_00025	COG0187	DNA topoisomerase II activity
BXU03_00035	COG0501	Belongs to the peptidase M48B family
BXU03_00065	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
BXU03_00075	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BXU03_00095	COG4772	TonB-dependent receptor
BXU03_00110	COG3039	Transposase
BXU03_00140	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
BXU03_00150	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BXU03_00230	COG3039	Transposase
BXU03_00245	COG2826	transposase and inactivated derivatives, IS30 family
BXU03_00280	COG1090	epimerase
BXU03_00285	COG0642	Histidine kinase
BXU03_00295	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BXU03_00400	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BXU03_00480	COG1511	domain protein
BXU03_00480	COG3264	Mechanosensitive ion channel
BXU03_00490	COG3293	Transposase
BXU03_00500	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
BXU03_00510	COG2354	Protein conserved in bacteria
BXU03_00520	COG0745	RESPONSE REGULATOR receiver
BXU03_00520	COG3706	GGDEF domain
BXU03_00535	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
BXU03_00560	COG0702	epimerase
BXU03_00570	COG1858	cytochrome C peroxidase
BXU03_00655	COG0513	Belongs to the DEAD box helicase family
BXU03_00665	COG3039	Transposase
BXU03_00715	COG1136	(ABC) transporter
BXU03_00745	COG1136	(ABC) transporter
BXU03_00760	COG2826	transposase and inactivated derivatives, IS30 family
BXU03_00785	COG1272	protein, Hemolysin III
BXU03_00790	COG1205	dead DEAH box helicase
BXU03_00790	COG1111	helicase
BXU03_00850	COG0070	glutamate synthase
BXU03_00850	COG0069	glutamate synthase activity
BXU03_00850	COG0067	glutamate synthase
BXU03_00855	COG0493	'glutamate synthase
BXU03_00880	COG2826	transposase and inactivated derivatives, IS30 family
BXU03_00910	COG1609	Transcriptional regulator
BXU03_00945	COG0366	Alpha amylase catalytic
BXU03_00950	COG0366	Alpha amylase catalytic
BXU03_00970	COG3328	transposase activity
BXU03_01000	COG0606	chelatase, subunit chli
BXU03_01050	COG1166	arginine decarboxylase activity
BXU03_01065	COG3501	Rhs element vgr protein
BXU03_01145	COG1028	Short-chain dehydrogenase reductase Sdr
BXU03_01170	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
BXU03_01190	COG0210	DNA helicase
BXU03_01210	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
BXU03_01250	COG2937	Belongs to the GPAT DAPAT family
BXU03_01290	COG2755	lipolytic protein G-D-S-L family
BXU03_01305	COG3186	Phenylalanine-4-hydroxylase
BXU03_01310	COG1522	sequence-specific DNA binding
BXU03_01355	COG1064	alcohol dehydrogenase
BXU03_01365	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
BXU03_01375	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
BXU03_01385	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
BXU03_01405	COG0676	glucose-6-phosphate 1-epimerase activity
BXU03_01460	COG2963	transposase activity
BXU03_01490	COG3293	Transposase
BXU03_01510	COG2853	Lipoprotein
BXU03_01525	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BXU03_01530	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
BXU03_01535	COG1127	ABC transporter
BXU03_01565	COG3293	Transposase
BXU03_01610	COG2801	Transposase and inactivated derivatives
BXU03_01635	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BXU03_01645	COG3293	Transposase
BXU03_01650	COG3039	Transposase
BXU03_01655	COG3265	gluconokinase activity
BXU03_01660	COG2211	Major facilitator Superfamily
BXU03_01665	COG3459	Glycosyltransferase 36 associated
BXU03_01680	COG2205	protein histidine kinase activity
BXU03_01690	COG1414	Transcriptional regulator
BXU03_01695	COG0738	Major facilitator superfamily
BXU03_01700	COG3254	rhamnose metabolic process
BXU03_01730	COG0339	signal peptide processing
BXU03_01760	COG0564	pseudouridine synthase activity
BXU03_01785	COG1181	Belongs to the D-alanine--D-alanine ligase family
BXU03_01825	COG3293	Transposase
BXU03_01840	COG2801	Transposase and inactivated derivatives
BXU03_01880	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BXU03_01890	COG0842	Transport permease protein
BXU03_01895	COG1131	(ABC) transporter
BXU03_01920	COG1476	TRANSCRIPTIONal
BXU03_01930	COG4555	ABC transporter
BXU03_01965	COG0625	glutathione transferase activity
BXU03_02015	COG0583	DNA-binding transcription factor activity
BXU03_02050	COG1199	ATP-dependent helicase activity
BXU03_02070	COG1566	PFAM secretion protein HlyD family protein
BXU03_02105	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BXU03_02115	COG0745	RESPONSE REGULATOR receiver
BXU03_02120	COG2205	protein histidine kinase activity
BXU03_02135	COG3228	Belongs to the MtfA family
BXU03_02150	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
BXU03_02150	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
BXU03_02210	COG3237	CsbD-like
BXU03_02215	COG0180	Tryptophanyl-tRNA synthetase
BXU03_02220	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BXU03_02270	COG0753	catalase activity
BXU03_02285	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
BXU03_02295	COG0628	permease
BXU03_02315	COG1040	competence protein
BXU03_02340	COG1028	Short-chain dehydrogenase reductase Sdr
BXU03_02355	COG0463	Glycosyl transferase, family 2
BXU03_02365	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BXU03_02370	COG3100	YcgL domain-containing protein
BXU03_02385	COG3387	PFAM Glycoside hydrolase 15-related
BXU03_02390	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BXU03_02405	COG2239	Acts as a magnesium transporter
BXU03_02415	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BXU03_02415	COG1042	CoA-binding domain protein
BXU03_02415	COG0045	succinate-CoA ligase (ADP-forming) activity
BXU03_02430	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BXU03_02440	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BXU03_02480	COG3485	protocatechuate 3,4-dioxygenase
BXU03_02500	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BXU03_02505	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BXU03_02515	COG1414	Transcriptional regulator
BXU03_02530	COG4221	oxidoreductase activity
BXU03_02555	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BXU03_02580	COG0463	Glycosyl transferase, family 2
BXU03_02595	COG1475	DNA binding
BXU03_02600	COG1192	Involved in chromosome partitioning
BXU03_02615	COG0708	Exodeoxyribonuclease III
BXU03_02620	COG2211	Major facilitator Superfamily
BXU03_02635	COG0739	heme binding
BXU03_02675	COG2963	transposase activity
BXU03_02725	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
BXU03_02745	COG2814	Major facilitator Superfamily
BXU03_02760	COG1289	transmembrane transporter activity
BXU03_02785	COG0151	Belongs to the GarS family
BXU03_02790	COG0138	bifunctional purine biosynthesis protein purh
BXU03_02805	COG2267	carboxylic ester hydrolase activity
BXU03_02815	COG2267	carboxylic ester hydrolase activity
BXU03_02820	COG0671	phosphoesterase, PA-phosphatase related
BXU03_02820	COG2453	phosphatase
BXU03_02835	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
BXU03_02890	COG0439	Biotin carboxylase
BXU03_02900	COG0511	ligase activity, forming carbon-carbon bonds
BXU03_02920	COG1324	tolerance protein
BXU03_02950	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BXU03_02975	COG0534	Mate efflux family protein
BXU03_02980	COG0616	signal peptide processing
BXU03_02990	COG1028	Short-chain dehydrogenase reductase Sdr
BXU03_03010	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BXU03_03010	COG1754	DNA topoisomerase type I activity
BXU03_03030	COG0758	DNA mediated transformation
BXU03_03035	COG1652	LysM domain
BXU03_03040	COG0242	peptide deformylase activity
BXU03_03055	COG3293	Transposase
BXU03_03115	COG1560	Kdo2-lipid A biosynthetic process
BXU03_03125	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BXU03_03175	COG2801	Transposase and inactivated derivatives
BXU03_03270	COG1063	alcohol dehydrogenase
BXU03_03280	COG3039	Transposase
BXU03_03290	COG1271	oxidase subunit
BXU03_03335	COG2801	Transposase and inactivated derivatives
BXU03_03370	COG2972	Histidine kinase
BXU03_03385	COG0531	amino acid
BXU03_03405	COG3590	peptidase
BXU03_03420	COG0667	Aldo Keto reductase
BXU03_03435	COG3384	dioxygenase
BXU03_03445	COG1573	uracil-dna glycosylase
BXU03_03455	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
BXU03_03470	COG0025	NhaP-type Na H and K H
BXU03_03475	COG1131	(ABC) transporter
BXU03_03480	COG0842	Transport permease protein
BXU03_03495	COG1404	Belongs to the peptidase S8 family
BXU03_03510	COG0745	RESPONSE REGULATOR receiver
BXU03_03555	COG1522	sequence-specific DNA binding
BXU03_03560	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BXU03_03585	COG2202	Pas domain
BXU03_03585	COG2205	protein histidine kinase activity
BXU03_03615	COG2813	Specifically methylates the guanine in position
BXU03_03620	COG1187	pseudouridine synthase activity
BXU03_03625	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BXU03_03660	COG0697	spore germination
BXU03_03670	COG2011	ABC-type metal ion transport system permease component
BXU03_03700	COG0508	dehydrogenase complex catalyzes the overall conversion of
BXU03_03710	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BXU03_03730	COG0356	it plays a direct role in the translocation of protons across the membrane
BXU03_03765	COG0355	proton-transporting ATP synthase activity, rotational mechanism
BXU03_03820	COG3842	ATPase activity
BXU03_03825	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BXU03_03830	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BXU03_03845	COG3293	Transposase
BXU03_03885	COG0339	signal peptide processing
BXU03_03925	COG1956	GAF domain-containing protein
BXU03_03940	COG0720	synthase
BXU03_03950	COG0513	Belongs to the DEAD box helicase family
BXU03_03965	COG0625	glutathione transferase activity
BXU03_03995	COG0626	cystathionine gamma-synthase activity
BXU03_04035	COG3328	transposase activity
BXU03_04060	COG2086	electron transfer activity
BXU03_04085	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
BXU03_04085	COG0662	Cupin 2, conserved barrel domain protein
BXU03_04090	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BXU03_04130	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BXU03_04130	COG3218	ABC-type transport auxiliary lipoprotein component
BXU03_04135	COG1127	ABC transporter
BXU03_04140	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
BXU03_04170	COG1183	phosphatidylcholine synthase activity
BXU03_04205	COG3039	Transposase
BXU03_04245	COG3039	Transposase
BXU03_04265	COG2963	transposase activity
BXU03_04280	COG0525	valine-tRNA ligase activity
BXU03_04305	COG0795	lipopolysaccharide-transporting ATPase activity
BXU03_04320	COG4974	Belongs to the 'phage' integrase family
BXU03_04325	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BXU03_04335	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BXU03_04335	COG0047	phosphoribosylformylglycinamidine synthase activity
BXU03_04345	COG5295	Hep Hag repeat protein
BXU03_04355	COG1404	Belongs to the peptidase S8 family
BXU03_04360	COG1404	Belongs to the peptidase S8 family
BXU03_04365	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BXU03_04375	COG1459	type II secretion system
BXU03_04380	COG2165	general secretion pathway protein
BXU03_04385	COG4970	Tfp pilus assembly protein FimT
BXU03_04390	COG2165	general secretion pathway protein
BXU03_04395	COG4795	General secretion pathway protein
BXU03_04400	COG3156	type II secretion system protein K
BXU03_04405	COG3166	PFAM Fimbrial assembly family protein
BXU03_04420	COG1450	Type ii and iii secretion system protein
BXU03_04435	COG2188	Transcriptional regulator
BXU03_04480	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BXU03_04485	COG1518	maintenance of DNA repeat elements
BXU03_04520	COG3039	Transposase
BXU03_04540	COG1399	metal-binding, possibly nucleic acid-binding protein
BXU03_04565	COG1028	Short-chain dehydrogenase reductase Sdr
BXU03_04580	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BXU03_04585	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BXU03_04605	COG3039	Transposase
BXU03_04620	COG3829	transcription factor binding
BXU03_04700	COG2826	transposase and inactivated derivatives, IS30 family
BXU03_04710	COG0678	peroxiredoxin activity
BXU03_04730	COG0330	HflC and HflK could
BXU03_04735	COG0330	HflC and HflK could
BXU03_04745	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BXU03_04750	COG0308	aminopeptidase N
BXU03_04815	COG1560	Kdo2-lipid A biosynthetic process
BXU03_04820	COG1519	Transferase
BXU03_04825	COG1538	Outer membrane efflux protein
BXU03_04830	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
BXU03_04940	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
BXU03_04990	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BXU03_05000	COG3781	membrane
BXU03_05045	COG3293	Transposase
BXU03_05150	COG2963	transposase activity
BXU03_05170	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
BXU03_05195	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BXU03_05200	COG0039	L-malate dehydrogenase activity
BXU03_05205	COG0625	glutathione transferase activity
BXU03_05225	COG3039	Transposase
BXU03_05265	COG3293	Transposase
BXU03_05270	COG0584	glycerophosphoryl diester phosphodiesterase
BXU03_05310	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BXU03_05345	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BXU03_05350	COG0583	DNA-binding transcription factor activity
BXU03_05355	COG3634	alkyl hydroperoxide reductase activity
BXU03_05365	COG2890	protein-(glutamine-N5) methyltransferase activity
BXU03_05405	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BXU03_05405	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BXU03_05420	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
BXU03_05440	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
BXU03_05445	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
BXU03_05480	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BXU03_05490	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BXU03_05525	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BXU03_05545	COG0521	Mo-molybdopterin cofactor biosynthetic process
BXU03_05560	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
BXU03_05585	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BXU03_05600	COG0012	GTP binding
BXU03_05630	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BXU03_05635	COG0250	Participates in transcription elongation, termination and antitermination
BXU03_05675	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
BXU03_05715	COG0089	rRNA binding
BXU03_05740	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BXU03_05745	COG0255	Belongs to the universal ribosomal protein uL29 family
BXU03_05750	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
BXU03_05770	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BXU03_05790	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
BXU03_05795	COG1841	ribosomal large subunit assembly
BXU03_05805	COG0201	protein transport
BXU03_05810	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BXU03_05825	COG0202	RNA polymerase activity
BXU03_05830	COG0203	ribosomal protein L17
BXU03_05845	COG3293	Transposase
BXU03_05855	COG2963	transposase activity
BXU03_05900	COG3551	Protein conserved in bacteria
BXU03_05930	COG2194	sulfuric ester hydrolase activity
BXU03_05940	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
BXU03_05945	COG0745	RESPONSE REGULATOR receiver
BXU03_05950	COG0642	Histidine kinase
BXU03_05960	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
BXU03_05965	COG2894	cell division
BXU03_05985	COG4585	Histidine kinase
BXU03_05990	COG2197	response regulator
BXU03_06005	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
BXU03_06030	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
BXU03_06085	COG3501	Rhs element vgr protein
BXU03_06135	COG1262	PFAM Formylglycine-generating sulfatase enzyme
BXU03_06145	COG1262	PFAM Formylglycine-generating sulfatase enzyme
BXU03_06155	COG3039	Transposase
BXU03_06175	COG3501	Rhs element vgr protein
BXU03_06200	COG3501	Rhs element vgr protein
BXU03_06205	COG3328	transposase activity
BXU03_06215	COG3179	chitinase
BXU03_06220	COG3501	Rhs element vgr protein
BXU03_06285	COG3501	Rhs element vgr protein
BXU03_06335	COG3039	Transposase
BXU03_06350	COG3039	Transposase
BXU03_06360	COG3501	Rhs element vgr protein
BXU03_06410	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
BXU03_06430	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
BXU03_06435	COG1708	protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity
BXU03_06440	COG1708	protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity
BXU03_06455	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
BXU03_06490	COG0328	RNA-DNA hybrid ribonuclease activity
BXU03_06490	COG0406	alpha-ribazole phosphatase activity
BXU03_06495	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
BXU03_06540	COG0587	DNA-directed DNA polymerase activity
BXU03_06560	COG1297	OPT oligopeptide transporter protein
BXU03_06585	COG1506	peptidase
BXU03_06585	COG0823	Involved in the tonB-independent uptake of proteins
BXU03_06605	COG2207	Transcriptional regulator
BXU03_06605	COG1917	Cupin 2, conserved barrel domain protein
BXU03_06635	COG0753	catalase activity
BXU03_06680	COG0469	pyruvate kinase activity
BXU03_06690	COG3588	fructose-bisphosphate aldolase
BXU03_06695	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
BXU03_06745	COG2198	Histidine kinase
BXU03_06745	COG0784	Response regulator, receiver
BXU03_06745	COG2205	protein histidine kinase activity
BXU03_06775	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BXU03_06785	COG2895	sulfate adenylyltransferase (ATP) activity
BXU03_06785	COG0529	Catalyzes the synthesis of activated sulfate
BXU03_06795	COG3039	Transposase
BXU03_06805	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BXU03_06810	COG0308	aminopeptidase N
BXU03_06840	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BXU03_06860	COG1970	mechanosensitive ion channel activity
BXU03_06890	COG3273	potassium ion transport
BXU03_06890	COG0471	metal ion transport
BXU03_07045	COG3118	belongs to the thioredoxin family
BXU03_07075	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BXU03_07135	COG2968	Membrane
BXU03_07145	COG1530	ribonuclease E activity
BXU03_07150	COG3164	Protein of unknown function
BXU03_07160	COG0312	modulator of DNA gyrase
BXU03_07165	COG3028	Belongs to the UPF0307 family
BXU03_07170	COG0312	modulator of DNA gyrase
BXU03_07195	COG0142	geranyltranstransferase activity
BXU03_07205	COG0037	tRNA processing
BXU03_07210	COG1785	Belongs to the alkaline phosphatase family
BXU03_07230	COG0791	NLP P60 protein
BXU03_07235	COG0791	NLP P60 protein
BXU03_07240	COG1047	Peptidyl-prolyl cis-trans
BXU03_07245	COG2311	Membrane
BXU03_07250	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BXU03_07295	COG0489	protein tyrosine kinase activity
BXU03_07315	COG0412	Dienelactone hydrolase
BXU03_07325	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BXU03_07345	COG0433	COG0433 Predicted ATPase
BXU03_07375	COG2890	protein-(glutamine-N5) methyltransferase activity
BXU03_07385	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BXU03_07390	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BXU03_07430	COG0133	tryptophan synthase activity
BXU03_07475	COG3293	Transposase
BXU03_07495	COG1028	Short-chain dehydrogenase reductase Sdr
BXU03_07515	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BXU03_07535	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
BXU03_07540	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
BXU03_07545	COG1034	ATP synthesis coupled electron transport
BXU03_07550	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
BXU03_07565	COG0713	ATP synthesis coupled electron transport
BXU03_07580	COG1007	ATP synthesis coupled electron transport
BXU03_07595	COG0195	Participates in both transcription termination and antitermination
BXU03_07615	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
BXU03_07650	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BXU03_07655	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
BXU03_07665	COG2095	MarC family integral membrane protein
BXU03_07680	COG1611	Belongs to the LOG family
BXU03_07720	COG4969	Belongs to the N-Me-Phe pilin family
BXU03_07725	COG0556	nucleotide-excision repair
BXU03_07755	COG2963	transposase activity
BXU03_07775	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BXU03_07780	COG0291	Belongs to the bacterial ribosomal protein bL35 family
BXU03_07785	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
BXU03_07790	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BXU03_07800	COG0776	regulation of translation
BXU03_07845	COG0438	transferase activity, transferring glycosyl groups
BXU03_07850	COG0438	transferase activity, transferring glycosyl groups
BXU03_07905	COG3040	lipid binding
BXU03_07995	COG4191	Histidine kinase
BXU03_07995	COG0784	Response regulator, receiver
BXU03_08020	COG0552	protein localization to endoplasmic reticulum
BXU03_08030	COG3938	Belongs to the proline racemase family
BXU03_08035	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BXU03_08050	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BXU03_08060	COG0006	proline dipeptidase activity
BXU03_08075	COG0531	amino acid
BXU03_08125	COG4206	TonB-dependent receptor
BXU03_08150	COG4206	TonB-dependent receptor
BXU03_08155	COG3328	transposase activity
BXU03_08215	COG0746	molybdenum cofactor guanylyltransferase activity
BXU03_08240	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
BXU03_08240	COG1648	precorrin-2 dehydrogenase activity
BXU03_08270	COG3039	Transposase
BXU03_08275	COG3039	Transposase
BXU03_08300	COG3293	Transposase
BXU03_08310	COG3039	Transposase
BXU03_08325	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
BXU03_08355	COG3293	Transposase
BXU03_08370	COG1530	ribonuclease E activity
BXU03_08380	COG3064	Membrane
BXU03_08385	COG0428	transporter
BXU03_08390	COG0428	transporter
BXU03_08400	COG2154	pterin-4-alpha-carbinolamine dehydratase
BXU03_08405	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
BXU03_08405	COG0316	Belongs to the HesB IscA family
BXU03_08450	COG3039	Transposase
BXU03_08540	COG3501	Rhs element vgr protein
BXU03_08575	COG0631	protein serine/threonine phosphatase activity
BXU03_08610	COG1858	cytochrome C peroxidase
BXU03_08665	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BXU03_08670	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BXU03_08690	COG2201	protein-glutamate methylesterase activity
BXU03_08735	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BXU03_08755	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BXU03_08770	COG1595	DNA-templated transcription, initiation
BXU03_08820	COG2244	polysaccharide biosynthetic process
BXU03_08850	COG2264	protein methyltransferase activity
BXU03_08860	COG0438	transferase activity, transferring glycosyl groups
BXU03_08875	COG1136	(ABC) transporter
BXU03_08880	COG1132	(ABC) transporter
BXU03_08890	COG0477	Major facilitator Superfamily
BXU03_08905	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BXU03_08920	COG1253	flavin adenine dinucleotide binding
BXU03_08935	COG0306	phosphate transporter
BXU03_08995	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
BXU03_09015	COG2840	Smr protein MutS2
BXU03_09030	COG1238	metal cluster binding
BXU03_09045	COG1534	Rna-binding protein
BXU03_09055	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BXU03_09060	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BXU03_09065	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BXU03_09070	COG1923	regulation of RNA biosynthetic process
BXU03_09075	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BXU03_09080	COG1546	Belongs to the CinA family
BXU03_09100	COG2137	regulation of response to DNA damage stimulus
BXU03_09110	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
BXU03_09130	COG0305	Participates in initiation and elongation during chromosome replication
BXU03_09135	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BXU03_09155	COG1741	Belongs to the pirin family
BXU03_09160	COG0583	DNA-binding transcription factor activity
BXU03_09190	COG0352	thiamine-phosphate diphosphorylase activity
BXU03_09190	COG0351	phosphomethylpyrimidine kinase
BXU03_09200	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
BXU03_09205	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BXU03_09230	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BXU03_09240	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
BXU03_09245	COG3734	2-keto-3-deoxy-galactonokinase
BXU03_09260	COG0800	Aldolase
BXU03_09275	COG1501	Belongs to the glycosyl hydrolase 31 family
BXU03_09285	COG1070	Carbohydrate kinase
BXU03_09295	COG0477	Major facilitator Superfamily
BXU03_09365	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BXU03_09370	COG2258	MOSC domain
BXU03_09375	COG3293	Transposase
BXU03_09385	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
BXU03_09390	COG0505	Belongs to the CarA family
BXU03_09400	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
BXU03_09405	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BXU03_09415	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BXU03_09490	COG2198	Histidine kinase
BXU03_09490	COG0784	Response regulator, receiver
BXU03_09490	COG2205	protein histidine kinase activity
BXU03_09495	COG1024	Enoyl-CoA hydratase
BXU03_09500	COG0318	PFAM AMP-dependent synthetase and ligase
BXU03_09530	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BXU03_09560	COG0840	transmembrane signaling receptor activity
BXU03_09580	COG3039	Transposase
BXU03_09600	COG0835	chemotaxis
BXU03_09620	COG0840	transmembrane signaling receptor activity
BXU03_09625	COG0840	transmembrane signaling receptor activity
BXU03_09635	COG0840	transmembrane signaling receptor activity
BXU03_09645	COG0840	transmembrane signaling receptor activity
BXU03_09655	COG0840	transmembrane signaling receptor activity
BXU03_09685	COG0745	RESPONSE REGULATOR receiver
BXU03_09695	COG0835	chemotaxis
BXU03_09700	COG1192	Involved in chromosome partitioning
BXU03_09705	COG1360	Flagellar Motor Protein
BXU03_09710	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BXU03_09730	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BXU03_09740	COG4771	TonB-dependent receptor
BXU03_09785	COG3039	Transposase
BXU03_09830	COG3501	Rhs element vgr protein
BXU03_09850	COG3501	Rhs element vgr protein
BXU03_09870	COG3501	Rhs element vgr protein
BXU03_09920	COG3039	Transposase
BXU03_09945	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BXU03_09960	COG3039	Transposase
BXU03_09970	COG3039	Transposase
BXU03_09980	COG3039	Transposase
BXU03_09995	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BXU03_09995	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BXU03_10000	COG1105	Belongs to the carbohydrate kinase PfkB family
BXU03_10005	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BXU03_10005	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BXU03_10010	COG1609	Transcriptional regulator
BXU03_10015	COG3385	transposase activity
BXU03_10025	COG3293	Transposase
BXU03_10040	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BXU03_10045	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BXU03_10055	COG2902	Dehydrogenase
BXU03_10065	COG3039	Transposase
BXU03_10075	COG0784	Response regulator, receiver
BXU03_10075	COG2205	protein histidine kinase activity
BXU03_10075	COG5002	protein histidine kinase activity
BXU03_10080	COG2733	membrane
BXU03_10090	COG1121	(ABC) transporter
BXU03_10115	COG0243	molybdopterin cofactor binding
BXU03_10125	COG0477	Major facilitator Superfamily
BXU03_10130	COG3706	GGDEF domain
BXU03_10130	COG0745	RESPONSE REGULATOR receiver
BXU03_10135	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BXU03_10140	COG0174	glutamine synthetase
BXU03_10175	COG3842	ATPase activity
BXU03_10180	COG1176	ABC-type spermidine putrescine transport system, permease component I
BXU03_10185	COG1177	transmembrane transport
BXU03_10195	COG1012	belongs to the aldehyde dehydrogenase family
BXU03_10210	COG4535	Mg2 and Co2 transporter CorC
BXU03_10230	COG1702	phosphate starvation-inducible protein PhoH
BXU03_10255	COG0741	lytic transglycosylase activity
BXU03_10260	COG0723	plastoquinol--plastocyanin reductase activity
BXU03_10265	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
BXU03_10270	COG2857	Cytochrome c1
BXU03_10275	COG0625	glutathione transferase activity
BXU03_10280	COG2969	positive regulation of protein catabolic process
BXU03_10315	COG3328	transposase activity
BXU03_10395	COG1262	PFAM Formylglycine-generating sulfatase enzyme
BXU03_10420	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BXU03_10425	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BXU03_10425	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
BXU03_10430	COG0802	atpase or kinase
BXU03_10435	COG0860	N-Acetylmuramoyl-L-alanine amidase
BXU03_10465	COG1028	Short-chain dehydrogenase reductase Sdr
BXU03_10475	COG0501	Belongs to the peptidase M48B family
BXU03_10485	COG2081	HI0933 family
BXU03_10490	COG4681	YaeQ
BXU03_10505	COG0625	glutathione transferase activity
BXU03_10515	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
BXU03_10520	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BXU03_10525	COG0513	Belongs to the DEAD box helicase family
BXU03_10560	COG0483	inositol monophosphate 1-phosphatase activity
BXU03_10575	COG3300	MHYT domain
BXU03_10575	COG5001	Diguanylate cyclase
BXU03_10580	COG1509	lysine 2,3-aminomutase activity
BXU03_10595	COG0402	S-adenosylhomocysteine deaminase activity
BXU03_10630	COG4677	pectinesterase activity
BXU03_10655	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
BXU03_10665	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BXU03_10680	COG2166	iron-sulfur cluster assembly
BXU03_10695	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BXU03_10700	COG0137	argininosuccinate synthase activity
BXU03_10710	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BXU03_10715	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
BXU03_10775	COG1294	oxidase, subunit
BXU03_10780	COG1271	oxidase subunit
BXU03_10785	COG3039	Transposase
BXU03_10800	COG4988	ABC transporter
BXU03_10805	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
BXU03_10815	COG3039	Transposase
BXU03_10945	COG3209	COG3209 Rhs family protein
BXU03_10955	COG3039	Transposase
BXU03_10965	COG3293	Transposase
BXU03_11010	COG0643	Histidine kinase
BXU03_11010	COG2198	Histidine kinase
BXU03_11030	COG0455	bacterial-type flagellum organization
BXU03_11045	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BXU03_11060	COG3300	MHYT domain
BXU03_11060	COG5001	Diguanylate cyclase
BXU03_11065	COG3300	MHYT domain
BXU03_11065	COG5001	Diguanylate cyclase
BXU03_11070	COG1684	flagellar biosynthetic protein fliR
BXU03_11075	COG1987	bacterial-type flagellum assembly
BXU03_11090	COG3190	flagellar
BXU03_11140	COG1677	Flagellar hook-basal body complex protein FliE
BXU03_11180	COG1028	Short-chain dehydrogenase reductase Sdr
BXU03_11190	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BXU03_11205	COG2204	response regulator
BXU03_11210	COG2201	protein-glutamate methylesterase activity
BXU03_11240	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
BXU03_11245	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BXU03_11275	COG4786	Flagellar basal body rod
BXU03_11280	COG4787	bacterial-type flagellum-dependent cell motility
BXU03_11285	COG1749	Flagellar hook protein flgE
BXU03_11290	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
BXU03_11295	COG1558	bacterial-type flagellum-dependent cell motility
BXU03_11305	COG0835	chemotaxis
BXU03_11305	COG0784	Response regulator, receiver
BXU03_11325	COG5002	protein histidine kinase activity
BXU03_11335	COG4585	Histidine kinase
BXU03_11340	COG5001	Diguanylate cyclase
BXU03_11365	COG0482	sulfurtransferase activity
BXU03_11375	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
BXU03_11380	COG0542	response to heat
BXU03_11385	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BXU03_11410	COG0492	ferredoxin-NADP+ reductase activity
BXU03_11415	COG1674	ftsk spoiiie
BXU03_11440	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BXU03_11460	COG0038	chloride channel
BXU03_11465	COG0183	Belongs to the thiolase family
BXU03_11470	COG1024	Enoyl-CoA hydratase
BXU03_11470	COG1250	3-hydroxyacyl-CoA dehydrogenase
BXU03_11480	COG0105	UTP biosynthetic process
BXU03_11495	COG1426	Protein conserved in bacteria
BXU03_11505	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BXU03_11515	COG0303	'Molybdopterin
BXU03_11585	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BXU03_11640	COG0742	ribosomal rna small subunit methyltransferase
BXU03_11660	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
BXU03_11665	COG0405	Gamma-glutamyltransferase
BXU03_11680	COG3293	Transposase
BXU03_11785	COG1862	Preprotein translocase
BXU03_11795	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BXU03_11835	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BXU03_11845	COG0704	Plays a role in the regulation of phosphate uptake
BXU03_11860	COG0573	inorganic phosphate transmembrane transporter activity
BXU03_11865	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BXU03_11885	COG3293	Transposase
BXU03_11910	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BXU03_11920	COG1024	Enoyl-CoA hydratase
BXU03_11930	COG0494	nUDIX hydrolase
BXU03_12000	COG0667	Aldo Keto reductase
BXU03_12010	COG2925	Exonuclease
BXU03_12035	COG0288	reversible hydration of carbon dioxide
BXU03_12065	COG0316	Belongs to the HesB IscA family
BXU03_12090	COG3115	cell septum assembly
BXU03_12105	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
BXU03_12165	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
BXU03_12175	COG2986	histidine ammonia-lyase
BXU03_12225	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BXU03_12235	COG0077	Prephenate dehydratase
BXU03_12235	COG1605	Chorismate mutase
BXU03_12265	COG4566	intracellular signal transduction
BXU03_12325	COG0860	N-Acetylmuramoyl-L-alanine amidase
BXU03_12340	COG0617	tRNA 3'-terminal CCA addition
BXU03_12350	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
BXU03_12355	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
BXU03_12385	COG1472	Belongs to the glycosyl hydrolase 3 family
BXU03_12405	COG2203	Gaf domain
BXU03_12405	COG3706	GGDEF domain
BXU03_12405	COG4251	negative regulation of phosphorylation
BXU03_12405	COG5001	Diguanylate cyclase
BXU03_12465	COG1595	DNA-templated transcription, initiation
BXU03_12490	COG0386	Belongs to the glutathione peroxidase family
BXU03_12555	COG3706	GGDEF domain
BXU03_12580	COG3039	Transposase
BXU03_12595	COG0784	Response regulator, receiver
BXU03_12595	COG2205	protein histidine kinase activity
BXU03_12595	COG5002	protein histidine kinase activity
BXU03_12620	COG3293	Transposase
BXU03_12635	COG0800	Aldolase
BXU03_12640	COG0129	dihydroxy-acid dehydratase activity
BXU03_12645	COG0363	glucosamine-6-phosphate deaminase activity
BXU03_12655	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BXU03_12670	COG0354	folic acid binding
BXU03_12685	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
BXU03_12700	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BXU03_12715	COG4591	ABC-type transport system involved in lipoprotein release permease component
BXU03_12745	COG0811	peptide transport
BXU03_12770	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BXU03_12815	COG3328	transposase activity
BXU03_12830	COG3039	Transposase
BXU03_12840	COG2801	Transposase and inactivated derivatives
BXU03_12850	COG2201	protein-glutamate methylesterase activity
BXU03_12870	COG3293	Transposase
BXU03_12900	COG0653	protein targeting
BXU03_12995	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
BXU03_12995	COG0140	phosphoribosyl-ATP diphosphatase activity
BXU03_13055	COG0124	histidyl-tRNA synthetase
BXU03_13070	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
BXU03_13115	COG1012	belongs to the aldehyde dehydrogenase family
BXU03_13140	COG0697	spore germination
BXU03_13150	COG1794	racemase activity, acting on amino acids and derivatives
BXU03_13175	COG0671	phosphoesterase, PA-phosphatase related
BXU03_13190	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
BXU03_13205	COG2183	response to ionizing radiation
BXU03_13215	COG0723	plastoquinol--plastocyanin reductase activity
BXU03_13215	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BXU03_13230	COG3243	poly(R)-hydroxyalkanoic acid synthase
BXU03_13240	COG1183	phosphatidylcholine synthase activity
BXU03_13245	COG1028	Short-chain dehydrogenase reductase Sdr
BXU03_13270	COG0668	transmembrane transport
BXU03_13280	COG0590	tRNA wobble adenosine to inosine editing
BXU03_13285	COG1321	iron dependent repressor
BXU03_13290	COG1914	H( )-stimulated, divalent metal cation uptake system
BXU03_13330	COG1028	Short-chain dehydrogenase reductase Sdr
BXU03_13345	COG0583	DNA-binding transcription factor activity
BXU03_13350	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BXU03_13390	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BXU03_13400	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BXU03_13405	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
BXU03_13420	COG0539	negative regulation of cytoplasmic translation
BXU03_13430	COG0257	Belongs to the bacterial ribosomal protein bL36 family
BXU03_13440	COG2957	Belongs to the agmatine deiminase family
BXU03_13450	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BXU03_13475	COG0395	ABC-type sugar transport system, permease component
BXU03_13480	COG1175	transmembrane transport
BXU03_13510	COG2350	Protein conserved in bacteria
BXU03_13515	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
BXU03_13520	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
BXU03_13525	COG1187	pseudouridine synthase activity
BXU03_13550	COG0436	Aminotransferase
BXU03_13615	COG0277	FAD linked oxidase domain protein
BXU03_13620	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BXU03_13630	COG0531	amino acid
BXU03_13635	COG0531	amino acid
BXU03_13640	COG0235	Class ii aldolase
BXU03_13675	COG2201	protein-glutamate methylesterase activity
BXU03_13735	COG0583	DNA-binding transcription factor activity
BXU03_13745	COG3039	Transposase
BXU03_13870	COG3039	Transposase
BXU03_13880	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BXU03_13905	COG0557	exoribonuclease II activity
BXU03_13935	COG1960	acyl-CoA dehydrogenase activity
BXU03_13945	COG0646	methionine synthase
BXU03_13945	COG1410	methionine synthase
BXU03_13950	COG0646	methionine synthase
BXU03_13950	COG1410	methionine synthase
BXU03_13965	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BXU03_14005	COG0386	Belongs to the glutathione peroxidase family
BXU03_14015	COG1725	Transcriptional regulator
BXU03_14020	COG1131	(ABC) transporter
BXU03_14085	COG2850	peptidyl-arginine hydroxylation
BXU03_14120	COG1132	(ABC) transporter
BXU03_14135	COG0583	DNA-binding transcription factor activity
BXU03_14150	COG1605	Chorismate mutase
BXU03_14150	COG0287	Prephenate dehydrogenase
BXU03_14155	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
BXU03_14185	COG0497	DNA recombination
BXU03_14195	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BXU03_14205	COG2914	Belongs to the UPF0125 (RnfH) family
BXU03_14215	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
BXU03_14230	COG1960	acyl-CoA dehydrogenase activity
BXU03_14305	COG2814	Major facilitator Superfamily
BXU03_14310	COG1566	PFAM secretion protein HlyD family protein
BXU03_14325	COG2207	Transcriptional regulator
BXU03_14355	COG4774	siderophore transport
BXU03_14370	COG0367	asparagine synthase
BXU03_14375	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BXU03_14385	COG1393	Belongs to the ArsC family
BXU03_14405	COG0024	Methionine aminopeptidase
BXU03_14470	COG0575	Belongs to the CDS family
BXU03_14480	COG0750	zinc metalloprotease
BXU03_14545	COG4771	TonB-dependent receptor
BXU03_14550	COG1131	(ABC) transporter
BXU03_14615	COG0529	Catalyzes the synthesis of activated sulfate
BXU03_14615	COG2895	sulfate adenylyltransferase (ATP) activity
BXU03_14650	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
BXU03_14665	COG2040	homocysteine
BXU03_14670	COG0833	amino acid
BXU03_14700	COG2878	Part of a membrane complex involved in electron transport
BXU03_14720	COG1595	DNA-templated transcription, initiation
BXU03_14745	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BXU03_14760	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BXU03_14765	COG0251	oxidation-reduction process
BXU03_14775	COG0392	lysyltransferase activity
BXU03_14775	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
BXU03_14805	COG3039	Transposase
BXU03_14820	COG2814	Major facilitator Superfamily
BXU03_14825	COG1902	pentaerythritol trinitrate reductase activity
BXU03_14840	COG2824	Alkylphosphonate utilization operon protein PhnA
BXU03_14855	COG1047	Peptidyl-prolyl cis-trans
BXU03_14900	COG3039	Transposase
BXU03_14905	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BXU03_14925	COG1451	nucleotide metabolic process
BXU03_14945	COG0183	Belongs to the thiolase family
BXU03_14965	COG0745	RESPONSE REGULATOR receiver
BXU03_14965	COG3706	GGDEF domain
BXU03_14980	COG1793	dna ligase
BXU03_14980	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
BXU03_14990	COG1793	dna ligase
BXU03_14995	COG1201	RNA secondary structure unwinding
BXU03_15015	COG1278	Cold shock
BXU03_15020	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
BXU03_15035	COG3046	protein related to deoxyribodipyrimidine photolyase
BXU03_15045	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
BXU03_15080	COG3039	Transposase
BXU03_15135	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BXU03_15150	COG1250	3-hydroxyacyl-CoA dehydrogenase
BXU03_15150	COG1024	Enoyl-CoA hydratase
BXU03_15170	COG1024	Enoyl-CoA hydratase
BXU03_15175	COG1960	acyl-CoA dehydrogenase activity
BXU03_15260	COG2353	YceI-like domain
BXU03_15270	COG2353	YceI-like domain
BXU03_15285	COG1760	l-serine dehydratase
BXU03_15295	COG0626	cystathionine gamma-synthase activity
BXU03_15300	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BXU03_15305	COG0739	heme binding
BXU03_15315	COG1272	protein, Hemolysin III
BXU03_15335	COG0516	GMP reductase activity
BXU03_15335	COG0517	IMP dehydrogenase activity
BXU03_15340	COG0463	Glycosyl transferase, family 2
BXU03_15350	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
BXU03_15360	COG4771	TonB-dependent receptor
BXU03_15365	COG1309	transcriptional regulator
BXU03_15375	COG1960	acyl-CoA dehydrogenase activity
BXU03_15425	COG0330	HflC and HflK could
BXU03_15440	COG3956	TIGRFAM MazG family protein
BXU03_15450	COG0494	nUDIX hydrolase
BXU03_15460	COG1385	rRNA (uridine-N3-)-methyltransferase activity
BXU03_15465	COG0837	glucose binding
BXU03_15480	COG1388	LysM domain
BXU03_15480	COG3858	chitin binding
BXU03_15490	COG3525	Glycosyl hydrolase, family 20, catalytic domain
BXU03_15500	COG1472	Belongs to the glycosyl hydrolase 3 family
BXU03_15535	COG3537	Alpha-1,2-mannosidase
BXU03_15585	COG3142	Participates in the control of copper homeostasis
BXU03_15590	COG1446	asparaginase
BXU03_15620	COG3039	Transposase
BXU03_15650	COG0840	transmembrane signaling receptor activity
BXU03_15655	COG0835	chemotaxis
BXU03_15670	COG0189	ligase activity
BXU03_15680	COG1397	ADP-ribosylglycohydrolase
BXU03_15690	COG1199	ATP-dependent helicase activity
BXU03_15700	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BXU03_15715	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BXU03_15730	COG5424	Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ
BXU03_15735	COG0535	radical SAM domain protein
BXU03_15740	COG0535	radical SAM domain protein
BXU03_15755	COG0837	glucose binding
BXU03_15765	COG0837	glucose binding
BXU03_15770	COG0837	glucose binding
BXU03_15780	COG1643	Atp-dependent helicase
BXU03_15785	COG0783	Belongs to the Dps family
BXU03_15790	COG0514	ATP-dependent DNA helicase (RecQ)
BXU03_15830	COG3293	Transposase
BXU03_15875	COG1187	pseudouridine synthase activity
BXU03_15880	COG0602	queuosine metabolic process
BXU03_15890	COG2885	chlorophyll binding
BXU03_15905	COG0848	biopolymer transport protein
BXU03_15915	COG0824	Thioesterase
BXU03_16020	COG2963	transposase activity
BXU03_16055	COG2963	transposase activity
BXU03_16095	COG3209	COG3209 Rhs family protein
BXU03_16115	COG3209	COG3209 Rhs family protein
BXU03_16115	COG3209	COG3209 Rhs family protein
BXU03_16125	COG3501	Rhs element vgr protein
BXU03_16135	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
BXU03_16140	COG1845	cytochrome c oxidase, subunit III
BXU03_16145	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BXU03_16175	COG0196	riboflavin kinase activity
BXU03_16180	COG0728	peptidoglycan biosynthetic process
BXU03_16185	COG0268	Binds directly to 16S ribosomal RNA
BXU03_16205	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BXU03_16210	COG0824	Thioesterase
BXU03_16225	COG1946	Acyl-CoA thioesterase
BXU03_16290	COG1877	trehalose-phosphatase activity
BXU03_16295	COG3387	PFAM Glycoside hydrolase 15-related
BXU03_16320	COG0564	pseudouridine synthase activity
BXU03_16325	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BXU03_16330	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BXU03_16330	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
BXU03_16340	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BXU03_16385	COG2194	sulfuric ester hydrolase activity
BXU03_16390	COG4969	Belongs to the N-Me-Phe pilin family
BXU03_16400	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
BXU03_16430	COG3039	Transposase
BXU03_16480	COG3293	Transposase
BXU03_16490	COG1132	(ABC) transporter
BXU03_16520	COG0745	RESPONSE REGULATOR receiver
BXU03_16525	COG5002	protein histidine kinase activity
BXU03_16525	COG5000	phosphorelay sensor kinase activity
BXU03_16530	COG0475	glutathione-regulated potassium exporter activity
BXU03_16535	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BXU03_16560	COG1187	pseudouridine synthase activity
BXU03_16565	COG5002	protein histidine kinase activity
BXU03_16565	COG5001	Diguanylate cyclase
BXU03_16675	COG1028	Short-chain dehydrogenase reductase Sdr
BXU03_16695	COG0415	Belongs to the DNA photolyase family
BXU03_16700	COG0305	Participates in initiation and elongation during chromosome replication
BXU03_16710	COG0367	asparagine synthase
BXU03_16725	COG1960	acyl-CoA dehydrogenase activity
BXU03_16740	COG0084	hydrolase, TatD family'
BXU03_16745	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
BXU03_16795	COG0735	belongs to the Fur family
BXU03_16820	COG3039	Transposase
BXU03_16830	COG3039	Transposase
BXU03_16835	COG3039	Transposase
BXU03_16875	COG2205	protein histidine kinase activity
BXU03_16900	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
BXU03_16910	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BXU03_16920	COG2198	Histidine kinase
BXU03_16920	COG0643	Histidine kinase
BXU03_16930	COG0840	transmembrane signaling receptor activity
BXU03_16935	COG0835	chemotaxis
BXU03_16940	COG2199	diguanylate cyclase activity
BXU03_16940	COG2200	EAL domain
BXU03_16940	COG2202	Pas domain
BXU03_16945	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BXU03_16955	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BXU03_16960	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BXU03_16965	COG3590	peptidase
BXU03_16985	COG0588	phosphoglycerate mutase activity
BXU03_16990	COG1515	deoxyribonuclease V activity
BXU03_17000	COG1741	Belongs to the pirin family
BXU03_17040	COG3501	Rhs element vgr protein
BXU03_17060	COG3501	Rhs element vgr protein
BXU03_17070	COG1741	Belongs to the pirin family
BXU03_17075	COG1966	Carbon starvation protein
BXU03_17080	COG2879	small protein
BXU03_17120	COG3293	Transposase
BXU03_17130	COG3706	GGDEF domain
BXU03_17130	COG4251	negative regulation of phosphorylation
BXU03_17130	COG5001	Diguanylate cyclase
BXU03_17130	COG2203	Gaf domain
BXU03_17140	COG0629	single-stranded DNA binding
BXU03_17145	COG0142	geranyltranstransferase activity
BXU03_17175	COG0527	aspartate kinase activity
BXU03_17185	COG0384	phenazine biosynthesis protein PhzF
BXU03_17195	COG1764	response to oxidative stress
BXU03_17225	COG0519	Catalyzes the synthesis of GMP from XMP
BXU03_17255	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BXU03_17300	COG0693	protein deglycase activity
BXU03_17320	COG1959	2 iron, 2 sulfur cluster binding
BXU03_17325	COG0719	Fe-S assembly protein
BXU03_17330	COG0396	ATPase activity
BXU03_17335	COG0719	Fe-S assembly protein
BXU03_17340	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BXU03_17360	COG3039	Transposase
BXU03_17395	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
BXU03_17405	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
BXU03_17410	COG0174	glutamine synthetase
BXU03_17415	COG3328	transposase activity
BXU03_17445	COG0326	Molecular chaperone. Has ATPase activity
BXU03_17450	COG2207	Transcriptional regulator
BXU03_17475	COG0657	acetylesterase activity
BXU03_17475	COG2755	lipolytic protein G-D-S-L family
BXU03_17500	COG0488	(ABC) transporter
BXU03_17550	COG4651	solute:proton antiporter activity
BXU03_17550	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BXU03_17570	COG4772	TonB-dependent receptor
BXU03_17580	COG4264	IucA IucC family
BXU03_17585	COG2814	Major facilitator Superfamily
BXU03_17595	COG0019	diaminopimelate decarboxylase activity
BXU03_17655	COG4206	TonB-dependent receptor
BXU03_17670	COG2963	transposase activity
BXU03_17695	COG0542	response to heat
BXU03_17740	COG0534	Mate efflux family protein
BXU03_17790	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BXU03_17805	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BXU03_17855	COG1555	photosystem II stabilization
BXU03_17860	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BXU03_17875	COG3178	'Phosphotransferase
BXU03_17880	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
BXU03_17890	COG0628	permease
BXU03_17915	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BXU03_17955	COG0271	Belongs to the BolA IbaG family
BXU03_17965	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
BXU03_17975	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
BXU03_17980	COG1137	ATPase activity
BXU03_17995	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BXU03_18015	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BXU03_18020	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BXU03_18030	COG2239	Acts as a magnesium transporter
BXU03_18040	COG1294	oxidase, subunit
BXU03_18045	COG1271	oxidase subunit
BXU03_18060	COG1113	amino acid transport
BXU03_18075	COG2197	response regulator
BXU03_18080	COG0531	amino acid
BXU03_18135	COG0789	Transcriptional regulator
BXU03_18165	COG0754	glutathionylspermidine amidase activity
BXU03_18190	COG1842	Phage shock protein A
BXU03_18210	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
BXU03_18220	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
BXU03_18255	COG2201	protein-glutamate methylesterase activity
BXU03_18300	COG2801	Transposase and inactivated derivatives
BXU03_18320	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
BXU03_18365	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BXU03_18370	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BXU03_18410	COG3039	Transposase
BXU03_18425	COG0745	RESPONSE REGULATOR receiver
BXU03_18430	COG2205	protein histidine kinase activity
BXU03_18445	COG3293	Transposase
BXU03_18455	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BXU03_18490	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BXU03_18490	COG3453	Protein conserved in bacteria
BXU03_18495	COG0725	ABC transporter, periplasmic molybdate-binding protein
BXU03_18500	COG4149	molybdate abc transporter
BXU03_18505	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
BXU03_18525	COG0642	Histidine kinase
BXU03_18530	COG0745	RESPONSE REGULATOR receiver
BXU03_18540	COG1028	Short-chain dehydrogenase reductase Sdr
BXU03_18550	COG1022	Amp-dependent synthetase and ligase
BXU03_18575	COG1376	ErfK ybiS ycfS ynhG family protein
BXU03_18580	COG0739	heme binding
BXU03_18585	COG4773	Receptor
BXU03_18590	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BXU03_18595	COG1301	dicarboxylic acid transport
BXU03_18615	COG2304	oxidoreductase activity
BXU03_18635	COG0714	Associated with various cellular activities
BXU03_18680	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
BXU03_18695	COG0254	rRNA binding
BXU03_18705	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BXU03_18715	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BXU03_18745	COG1561	YicC-like family, N-terminal region
BXU03_18765	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BXU03_18795	COG0006	proline dipeptidase activity
BXU03_18820	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BXU03_18830	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
BXU03_18840	COG2912	Transglutaminase-like superfamily
BXU03_18845	COG1773	rubredoxin
BXU03_18850	COG0352	thiamine-phosphate diphosphorylase activity
BXU03_18920	COG0281	malic enzyme
BXU03_18920	COG0280	phosphate acetyltransferase
BXU03_18940	COG4191	Histidine kinase
BXU03_18955	COG0583	DNA-binding transcription factor activity
BXU03_18970	COG2197	response regulator
BXU03_18975	COG1840	ABC-type Fe3 transport system, periplasmic component
BXU03_18980	COG0642	Histidine kinase
BXU03_18995	COG2851	Citrate transporter
BXU03_19000	COG1028	Short-chain dehydrogenase reductase Sdr
BXU03_19005	COG1609	Transcriptional regulator
BXU03_19015	COG2211	Major facilitator Superfamily
BXU03_19065	COG0726	polysaccharide deacetylase
BXU03_19070	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
BXU03_19095	COG3039	Transposase
BXU03_19100	COG3039	Transposase
BXU03_19150	COG0242	peptide deformylase activity
BXU03_19170	COG0714	Associated with various cellular activities
BXU03_19190	COG0537	adenosine 5'-monophosphoramidase activity
BXU03_19220	COG0314	molybdopterin synthase activity
BXU03_19225	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
BXU03_19240	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
BXU03_19245	COG1234	tRNA 3'-trailer cleavage
BXU03_19255	COG0859	PFAM glycosyl transferase family 9
BXU03_19265	COG0582	viral genome integration into host DNA
BXU03_19295	COG3501	Rhs element vgr protein
BXU03_19325	COG0631	protein serine/threonine phosphatase activity
BXU03_19335	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BXU03_19360	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BXU03_19395	COG0740	serine-type endopeptidase activity
BXU03_19400	COG0544	peptidyl-prolyl cis-trans isomerase activity
BXU03_19465	COG0473	3-isopropylmalate dehydrogenase activity
BXU03_19495	COG4783	chaperone-mediated protein folding
BXU03_19510	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
BXU03_19520	COG0438	transferase activity, transferring glycosyl groups
BXU03_19525	COG0671	phosphoesterase, PA-phosphatase related
BXU03_19550	COG2833	Protein of unknown function (DUF455)
BXU03_19570	COG0285	dihydrofolate synthase activity
BXU03_19580	COG0588	phosphoglycerate mutase activity
BXU03_19615	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
BXU03_19620	COG4208	sulfate ABC transporter
BXU03_19625	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
BXU03_19630	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
BXU03_19635	COG0156	8-amino-7-oxononanoate synthase activity
BXU03_19670	COG1902	pentaerythritol trinitrate reductase activity
BXU03_19670	COG0446	pyridine nucleotide-disulphide oxidoreductase
BXU03_19730	COG0745	RESPONSE REGULATOR receiver
BXU03_19730	COG3706	GGDEF domain
BXU03_19760	COG2826	transposase and inactivated derivatives, IS30 family
BXU03_19785	COG0697	spore germination
BXU03_19815	COG3386	PFAM SMP-30 Gluconolaconase
BXU03_19835	COG1024	Enoyl-CoA hydratase
BXU03_19845	COG0318	PFAM AMP-dependent synthetase and ligase
BXU03_19850	COG0583	DNA-binding transcription factor activity
BXU03_19890	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BXU03_19895	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BXU03_19905	COG2096	Adenosyltransferase
BXU03_19910	COG0123	including yeast histone deacetylase and acetoin utilization protein
BXU03_19925	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
BXU03_19985	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
BXU03_20010	COG0642	Histidine kinase
BXU03_20025	COG4181	ATPase activity
BXU03_20035	COG2175	clavaminate synthase activity
BXU03_20080	COG3293	Transposase
BXU03_20095	COG0667	Aldo Keto reductase
BXU03_20105	COG3039	Transposase
BXU03_20115	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BXU03_20120	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BXU03_20135	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BXU03_20150	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BXU03_20205	COG2226	methyltransferase
BXU03_20260	COG1028	Short-chain dehydrogenase reductase Sdr
BXU03_20260	COG3321	synthase
BXU03_20260	COG0604	alcohol dehydrogenase
BXU03_20275	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
BXU03_20290	COG0494	nUDIX hydrolase
BXU03_20305	COG1388	LysM domain
BXU03_20305	COG4942	peptidase
BXU03_20330	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
BXU03_20335	COG1181	Belongs to the D-alanine--D-alanine ligase family
BXU03_20355	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BXU03_20360	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BXU03_20375	COG3116	cell division
BXU03_20420	COG1988	membrane-bound metal-dependent
BXU03_20425	COG0277	FAD linked oxidase domain protein
BXU03_20430	COG0745	RESPONSE REGULATOR receiver
BXU03_20435	COG2205	protein histidine kinase activity
BXU03_20445	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
BXU03_20450	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
BXU03_20475	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
BXU03_20505	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BXU03_20505	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BXU03_20545	COG0488	(ABC) transporter
BXU03_20595	COG0745	RESPONSE REGULATOR receiver
BXU03_20600	COG2205	protein histidine kinase activity
BXU03_20645	COG2205	protein histidine kinase activity
BXU03_20705	COG3039	Transposase
BXU03_20720	COG3039	Transposase
BXU03_20810	COG0726	polysaccharide deacetylase
BXU03_20810	COG1649	PFAM Uncharacterised BCR, COG1649
BXU03_20815	COG1215	transferase activity, transferring glycosyl groups
BXU03_20825	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BXU03_20830	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BXU03_20835	COG1609	Transcriptional regulator
BXU03_20860	COG3250	beta-galactosidase activity
BXU03_20875	COG2963	transposase activity
BXU03_20885	COG2801	Transposase and inactivated derivatives
BXU03_20910	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BXU03_20915	COG4191	Histidine kinase
BXU03_20920	COG0784	Response regulator, receiver
BXU03_20925	COG4251	negative regulation of phosphorylation
BXU03_20930	COG2823	Periplasmic or secreted lipoprotein
BXU03_20935	COG0673	inositol 2-dehydrogenase activity
BXU03_20940	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
BXU03_20975	COG1056	cytidyltransferase-related domain
BXU03_20975	COG1051	belongs to the nudix hydrolase family
BXU03_21010	COG1686	Belongs to the peptidase S11 family
BXU03_21020	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BXU03_21025	COG2951	lytic endotransglycosylase activity
BXU03_21065	COG3501	Rhs element vgr protein
BXU03_21090	COG0772	Belongs to the SEDS family
BXU03_21105	COG1792	Involved in formation and maintenance of cell shape
BXU03_21110	COG1077	Cell shape determining protein MreB Mrl
BXU03_21170	COG2199	diguanylate cyclase activity
BXU03_21175	COG0308	aminopeptidase N
BXU03_21205	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
BXU03_21255	COG3293	Transposase
BXU03_21270	COG1505	serine-type exopeptidase activity
BXU03_21310	COG3275	phosphorelay sensor kinase activity
BXU03_21335	COG3293	Transposase
BXU03_21360	COG0659	secondary active sulfate transmembrane transporter activity
BXU03_21365	COG5297	Belongs to the glycosyl hydrolase family 6
BXU03_21365	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
BXU03_21410	COG3293	Transposase
BXU03_21450	COG0598	Magnesium transport protein CorA
BXU03_21460	COG1113	amino acid transport
BXU03_21470	COG5297	Belongs to the glycosyl hydrolase family 6
BXU03_21475	COG4305	rare lipoprotein A
BXU03_21480	COG0697	spore germination
BXU03_21540	COG4221	oxidoreductase activity
BXU03_21555	COG2963	transposase activity
BXU03_21575	COG0456	acetyltransferase
BXU03_21585	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
BXU03_21625	COG3227	Zinc metalloprotease (Elastase)
BXU03_21640	COG2111	Na H antiporter
BXU03_21640	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BXU03_21645	COG1006	Multisubunit Na H antiporter MnhC subunit
BXU03_21650	COG0651	ATP synthesis coupled electron transport
BXU03_21660	COG2212	antiporter activity
BXU03_21665	COG1320	monovalent cation:proton antiporter activity
BXU03_21675	COG3293	Transposase
BXU03_21705	COG3104	oligopeptide transport
BXU03_21720	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BXU03_21750	COG3293	Transposase
BXU03_21760	COG0183	Belongs to the thiolase family
BXU03_21835	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
BXU03_21840	COG3023	N-Acetylmuramoyl-L-alanine amidase
BXU03_21850	COG4948	Mandelate Racemase Muconate Lactonizing
BXU03_21885	COG0531	amino acid
BXU03_21895	COG3293	Transposase
BXU03_21915	COG4682	membrane
BXU03_21920	COG2133	pyrroloquinoline quinone binding
BXU03_21950	COG3293	Transposase
BXU03_21970	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BXU03_21980	COG0828	Belongs to the bacterial ribosomal protein bS21 family
BXU03_21985	COG1610	YqeY-like protein
BXU03_21995	COG1295	ribonuclease BN
BXU03_22000	COG0358	DNA primase activity
BXU03_22065	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
BXU03_22075	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BXU03_22165	COG0134	indole-3-glycerol-phosphate synthase activity
BXU03_22245	COG3328	transposase activity
BXU03_22265	COG1473	amidohydrolase
BXU03_22270	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BXU03_22275	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BXU03_22290	COG5383	Protein conserved in bacteria
BXU03_22335	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BXU03_22355	COG0028	Belongs to the TPP enzyme family
BXU03_22365	COG4191	Histidine kinase
BXU03_22390	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
BXU03_22405	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BXU03_22410	COG3177	Filamentation induced by cAMP protein fic
BXU03_22425	COG0596	Alpha beta hydrolase
BXU03_22435	COG0318	PFAM AMP-dependent synthetase and ligase
BXU03_22440	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BXU03_22495	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BXU03_22535	COG3039	Transposase
BXU03_22595	COG0232	Belongs to the dGTPase family. Type 2 subfamily
BXU03_22670	COG2353	YceI-like domain
BXU03_22705	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
BXU03_22720	COG3386	PFAM SMP-30 Gluconolaconase
BXU03_22760	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BXU03_22775	COG4771	TonB-dependent receptor
BXU03_22790	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BXU03_22810	COG1252	NADH dehydrogenase
BXU03_22820	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BXU03_22830	COG2201	protein-glutamate methylesterase activity
BXU03_22835	COG2177	Part of the ABC transporter FtsEX involved in
BXU03_22840	COG2884	Cell division ATP-binding protein ftsE
BXU03_22850	COG3118	belongs to the thioredoxin family
BXU03_22855	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BXU03_22880	COG0729	surface antigen
BXU03_22885	COG2911	Protein conserved in bacteria
BXU03_22925	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BXU03_22940	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BXU03_23010	COG1733	regulation of RNA biosynthetic process
BXU03_23015	COG0702	epimerase
BXU03_23050	COG0583	DNA-binding transcription factor activity
BXU03_23055	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BXU03_23070	COG2205	protein histidine kinase activity
BXU03_23075	COG2205	protein histidine kinase activity
BXU03_23080	COG0745	RESPONSE REGULATOR receiver
BXU03_23110	COG1902	pentaerythritol trinitrate reductase activity
BXU03_23115	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BXU03_23125	COG2814	Major facilitator Superfamily
BXU03_23130	COG0583	DNA-binding transcription factor activity
BXU03_23150	COG0084	hydrolase, TatD family'
BXU03_23195	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BXU03_23215	COG2072	flavoprotein involved in K transport
BXU03_23285	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BXU03_23290	COG1960	acyl-CoA dehydrogenase activity
BXU03_23345	COG0523	cobalamin synthesis protein
BXU03_23355	COG0697	spore germination
BXU03_23365	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
BXU03_23380	COG4771	TonB-dependent receptor
BXU03_23385	COG0457	Tetratricopeptide repeat
BXU03_23395	COG0752	glycyl-tRNA synthetase alpha subunit
BXU03_23400	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BXU03_23425	COG0518	GMP synthase (glutamine-hydrolyzing) activity
BXU03_23425	COG0519	Catalyzes the synthesis of GMP from XMP
BXU03_23435	COG0805	protein transport
BXU03_23445	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BXU03_23455	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
BXU03_23485	COG2974	May be involved in recombination
BXU03_23490	COG0037	tRNA processing
BXU03_23510	COG3661	Belongs to the glycosyl hydrolase 67 family
BXU03_23520	COG4948	Mandelate Racemase Muconate Lactonizing
BXU03_23530	COG1472	Belongs to the glycosyl hydrolase 3 family
BXU03_23535	COG0246	Mannitol dehydrogenase
BXU03_23560	COG3693	PFAM glycoside hydrolase, family 10
BXU03_23585	COG2211	Major facilitator Superfamily
BXU03_23625	COG3293	Transposase
BXU03_23635	COG4943	cyclic-guanylate-specific phosphodiesterase activity
BXU03_23680	COG1846	Transcriptional regulator
BXU03_23685	COG1764	response to oxidative stress
BXU03_23770	COG3549	Plasmid maintenance system killer
BXU03_23780	COG1074	ATP-dependent DNA helicase activity
BXU03_23785	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
BXU03_23825	COG2032	superoxide dismutase activity
BXU03_23830	COG2032	superoxide dismutase activity
BXU03_23835	COG2204	response regulator
BXU03_23840	COG3852	Histidine kinase
BXU03_23845	COG0004	ammonium transporteR
BXU03_23850	COG0347	Belongs to the P(II) protein family
BXU03_23855	COG0174	glutamine synthetase
BXU03_23905	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BXU03_23915	COG2062	phosphohistidine phosphatase, SixA
BXU03_23920	COG0489	protein tyrosine kinase activity
BXU03_23940	COG1396	sequence-specific DNA binding
BXU03_23945	COG3550	peptidyl-serine autophosphorylation
BXU03_23950	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
BXU03_23955	COG1262	PFAM Formylglycine-generating sulfatase enzyme
BXU03_23970	COG1125	glycine betaine transport
BXU03_23970	COG0517	IMP dehydrogenase activity
BXU03_23985	COG1119	ATPase activity
BXU03_23995	COG1752	Esterase of the alpha-beta hydrolase superfamily
BXU03_24010	COG3039	Transposase
BXU03_24020	COG2963	transposase activity
BXU03_24035	COG0656	L-ascorbic acid biosynthetic process
BXU03_24040	COG2130	NADP-dependent
BXU03_24045	COG0667	Aldo Keto reductase
BXU03_24055	COG1187	pseudouridine synthase activity
BXU03_24070	COG1643	Atp-dependent helicase
BXU03_24075	COG4807	Protein conserved in bacteria
BXU03_24080	COG4948	Mandelate Racemase Muconate Lactonizing
BXU03_24090	COG0179	Fumarylacetoacetate (FAA) hydrolase
BXU03_24095	COG1028	Short-chain dehydrogenase reductase Sdr
BXU03_24115	COG3507	Belongs to the glycosyl hydrolase 43 family
BXU03_24160	COG3162	membrane
BXU03_24165	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BXU03_24180	COG0708	Exodeoxyribonuclease III
BXU03_24195	COG2091	lysine biosynthetic process via aminoadipic acid
BXU03_24205	COG3540	Alkaline phosphatase
BXU03_24210	COG0357	Ribosomal RNA small subunit methyltransferase G
BXU03_24230	COG0227	Belongs to the bacterial ribosomal protein bL28 family
BXU03_24235	COG0267	Belongs to the bacterial ribosomal protein bL33 family
BXU03_24240	COG2159	amidohydrolase
BXU03_24255	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BXU03_24260	COG0583	DNA-binding transcription factor activity
BXU03_24265	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BXU03_24280	COG0210	DNA helicase
BXU03_24285	COG3039	Transposase
BXU03_24300	COG0531	amino acid
BXU03_24315	COG1322	Protein conserved in bacteria
BXU03_24325	COG0386	Belongs to the glutathione peroxidase family
BXU03_24385	COG0793	Belongs to the peptidase S41A family
BXU03_24390	COG4942	peptidase
BXU03_24400	COG2234	aminopeptidase activity
BXU03_24450	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BXU03_24455	COG0302	gtp cyclohydrolase
BXU03_24480	COG0477	Major facilitator Superfamily
BXU03_24550	COG1929	Belongs to the glycerate kinase type-1 family
BXU03_24555	COG2271	Major facilitator Superfamily
BXU03_24570	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
BXU03_24580	COG0861	Integral membrane protein TerC family
BXU03_24595	COG0584	glycerophosphoryl diester phosphodiesterase
BXU03_24605	COG0671	phosphoesterase, PA-phosphatase related
BXU03_24610	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
BXU03_24615	COG0726	polysaccharide deacetylase
BXU03_24630	COG0230	Belongs to the bacterial ribosomal protein bL34 family